LOCUS       DASWKS010000001         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1478486, whole genome shotgun sequence.
ACCESSION   DASWKS010000001 DASWKS010000000
VERSION     DASWKS010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478486"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1510)
                     /gene="purD"
                     /locus_tag="VGA78_00005"
     CDS             complement(203..1510)
                     /gene="purD"
                     /locus_tag="VGA78_00005"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEX9892264.1"
                     /translation="MKLLVVGAGGREHALCWALRHDRPDAEIYCSPGNPGTAALATNV
                     PAGRGGWDASDLSDLSDLSEQLAIDLTIVGPELPLARGLADHFRGRGHRVFGPIASAA
                     RIESSKAFAKEIMAAAGVPTAASATFTALEPAVDYVDHHSEPLVVKASGLAAGKGAVV
                     CGTRREAEHAVRAMLGHGSFGEAGQTVVIEDFLEGEELSVLAVTNGREVRLLPAAQDH
                     KRLLEGDRGPNTGGMGAYAPVTLATTELLARVEREVLHPTLAELDRMGATFRGVLYAG
                     LMVSPTGNPSVVEFNCRLGDPETQAVLPLVQHGLVELLWQAADGGPLPEIRLSGDASV
                     TTVLAARGYPDRPEKDAVITIPEPLPENVLVFHAGTRLDQQGRLRTAGGRVLAVTAVR
                     DSFEAAQGASRAVSDLIAFDGKQFRRDIGWREEGRRVRGGRGE"
     gene            complement(1507..>2100)
                     /locus_tag="VGA78_00010"
     CDS             complement(1507..>2100)
                     /locus_tag="VGA78_00010"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX9892265.1"
                     /translation="VVSGHSLYRTIAEILLNVSLGALPFLAGIALLPIRLAILEWSRK
                     SELSADRAGLLGSQDVMASQQLFMKMAGGPRGQHFAGPMHLDAFMAQANEYLQSNEGL
                     DLVYKILNTLALSHPMHTVRAAELQHWVASGAYERILRGEYVRRGEDKTRPLGDDLRE
                     ARDHYTSEVRDVASKMASAARKAAEKAGEAFKKAQQQ"
BASE COUNT          346 a          727 c          683 g          344 t
ORIGIN      
        1 cctgcgaccg gtgagcaccg gccgcaggtc gcggacgatg gtttcaacct cgggcagctc
       61 cggcacgctg gaaaagtaaa ggagtgagag gggagaggga gaagtgaact ggagagtgcc
      121 caatgcccag tgccgattgc agagggaggc cgccggagta gttccctctg ctatgggcaa
      181 tgggcattcg gcactctcca gttcactccc ccctcccccc tcttaccctt ctgccttctt
      241 cccgccagcc gatgtcccgc cggaattgct tgccgtcgaa cgcgatcaga tccgacacgg
      301 cacggctcgc gccctgagcc gcttcgaagc tgtcgcgaac cgcggtgact gccagcaccc
      361 ggcctcccgc ggtccggagc cggccttgct ggtccagccg ggtcccggcg tgaaaaacca
      421 gcacgttttc cggcaatggc tccgggatag tgatgactgc gtccttctcg ggacggtcgg
      481 gatagccccg agccgccagg accgtggtga ccgacgcgtc cccggagagg cgaatctcgg
      541 gaagcggtcc cccatcagcc gcctgccaga gcagctccac caggccgtgc tgcaccagtg
      601 gaagcaccgc ctgggtttcc ggatcaccca ggcgacagtt gaactcgacg accgacgggt
      661 ttcccgtcgg ggagaccatc aaccccgcgt agagcactcc ccggaaagtc gcacccatgc
      721 ggtccagctc ggccagtgtc gggtgcagca cttcccgctc cacccgtgcc agcagctcgg
      781 tcgtcgccag cgtgaccggc gcgtaggcgc ccatcccgcc ggtgttgggg ccgcggtctc
      841 cctcgagcag ccgcttgtgg tcctgggcgg ccggcagcag ccgcacctcg cggccgttgg
      901 tgacggcgag gaccgagagc tcttctcctt cgagaaaatc ttcgatcacc accgtttgac
      961 ctgcctcacc gaaggagccg tggcccagca tggcccggac ggcgtgctcc gcttcccgcc
     1021 gagtgccaca gacgacggct cccttcccgg cagccagacc ggacgccttc accaccagcg
     1081 gttcgctgtg gtggtccacg taatccaccg ccggctcgag cgcggtgaag gtggcgctcg
     1141 cggcagtcgg gactccggcc gccgccatga tctccttggc gaaggccttg gacgattcga
     1201 tgcgggcggc cgaggcaatg gggccaaaca cccggtggcc acggcctcga aagtgatccg
     1261 ccagcccgcg agccaggggc agctcgggac cgacgatcgt caaatcgatg gcaagctgtt
     1321 cggaaagatc ggaaaggtcg gaaaggtcgg aagcatccca cccgccgcga ccggcaggta
     1381 cgttggtcgc gagcgcagct gttccggggt tacccggcga acaatatatc tcggcgtcgg
     1441 gccggtcgtg ccggagcgcc caacagaggg catgctcgcg gccgccggcc ccgacgacga
     1501 gcagcttcac tgctgttggg ccttcttgaa ggcctcgccg gccttctccg cggctttgcg
     1561 cgccgcgctt gccatcttgg acgcgacgtc gcgcacttcc gaggtgtaat ggtctctggc
     1621 ctcgcgcagg tcatcgccca gcggccgggt cttgtcttca ccccggcgca cgtactcgcc
     1681 ccggaggatc cgctcgtagg ctccgctcgc cacccagtgc tgcagctccg ccgcccgaac
     1741 cgtgtgcatc gggtgggaca gcgccagcgt gttcaggatc ttgtagacca ggtccagccc
     1801 ttcattgctc tgcaggtatt cgttggcctg ggccatgaag gcgtcgaggt gcatcggtcc
     1861 ggcgaaatgc tgtccccggg gcccgccggc catcttcatg aacagctgtt gcgacgccat
     1921 gacatcctga ctcccgagca gaccggctcg gtcagccgag agctcggact tccgcgacca
     1981 ctcgaggatc gccagccgga ttggcagcaa ggcgatgccg gccagaaagg gcagggcgcc
     2041 caggctgacg ttgagaagga tctcggcgat cgtgcggtag agcgaatggc cgctgaccac
//
LOCUS       DASWKS010000002         5460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_739518, whole genome shotgun sequence.
ACCESSION   DASWKS010000002 DASWKS010000000
VERSION     DASWKS010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5460
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_739518"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2003)
                     /locus_tag="VGA78_00015"
     CDS             complement(<1..2003)
                     /locus_tag="VGA78_00015"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEX9892266.1"
                     /translation="MNQNPSAEWLEADGLGGFASGTVGGSRTRRYHALLLAALTPPTG
                     RTVLVDGFDAWLERGDGAYDGGSPTREFLTRQRYAPNVTTTSSVGGPGFEVEPWPAWT
                     WQLGSDATVECELFVPHGSSAVALRWRATGVPAGLTLVVRPFLSGRDAHALHHENPGC
                     DSGADVSSARVRWQPYASLPAVLSASNGDYHHAPLWYRNFELDEERDRGFDHTTDCFS
                     PGELRWDLSQGDAVWMLAAEGLPGVDRVLRGRPLATYRSIRSAELRRRARFPSRLHRS
                     ADSYLVARGAGKTIIAGYPWFTDWGRDTFIALRGLCLATGRLDEARDILLAWGETVSQ
                     GMVPNRFVDQGDAPEFNAVDASLWFVVAAWEYLQAAPDSPARVPLERAIRRIVQGYAD
                     GTRYGIRADGDGLLLSGEPGVQLTWMDARVGDWVVTPRIGKPVEVQALWLNALRIASG
                     LDAGLTSLLGRGLASFGGRFWNPDRECLYDVVDADRIPGRVDGSIRANQIFAVGGLPF
                     PLLEGDRARQVFGTVKRLLHTPLGLRSLAPGDGAYVPHYRGGPRERDAAYHQGTVWPW
                     LAGAFGEAWLRVEGNTDAVRAQIRQEVVQPLLAHLGDAGLGHISEIADAEPPHTPRGC
                     PFQAWSLGELIRLVRLLDQGEGARAASRSGRRRKVAGGQPSRSG"
     gene            complement(2000..2863)
                     /locus_tag="VGA78_00020"
     CDS             complement(2000..2863)
                     /locus_tag="VGA78_00020"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9892267.1"
                     /translation="MTATMMPPGPAAENDRRPIPKLLIGQKALVTGASSGIGKAVAMA
                     LAEAGADVCVNYPVEAEMDKADMEVEEIRSHGGHAFAHQCDVSKEIEVAGMFERLRTE
                     MGTVDIVVANAGIQRDAPLHEMTLAQWNRVLEVNLTGQFLCAREAVREFKRRGMRPEV
                     SRALGKFICMSSVHEVIPWSGHVNYAASKGGVMLMMKSIAQEVAPLKIRVVSVAPGAI
                     RTPINRDAWETPEAYQALLKLIPSKRIGETDDIARATIFLASDEADYITGTTLFVDGG
                     MTLYPGFEAGG"
     gene            complement(2860..>5460)
                     /locus_tag="VGA78_00025"
     CDS             complement(2860..>5460)
                     /locus_tag="VGA78_00025"
                     /inference="COORDINATES: protein motif:HMM:NF015177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892268.1"
                     /translation="VREDYGPDGAAWDYLPHDHARSRAYRWGEDGLAGMSDDAQHLCL
                     ALALWNGRDPILKERLFGLTNGEGNHGEDVKELYYFLDATPTHSYLRMLYKYPQLEFP
                     YARLVEENRRRGAPDTEFELLDTGVFDQDRYFDVVVEYAKASPEDILMRVTVHNRGPE
                     TAALHVLPQLWCRNVWSWGKGSRPALRRAGPGIVSVTHPVRGTYTLYTEAPELLFTEN
                     ETNASRVFGIDQDPGYWKDAFHERVVSGRVEAVNPAGEGTKVAAWFRDEIPAGASRTY
                     RVRLAADPLALPFAGFDAIVASRQREADQFYAELQGSLADPDARLVQRQAFAGMIWSK
                     QFFYYDVPEWLQGDRGHPAPPESRKRGRNHEWTHLNNADIISMPDTWEYPWYAAWDLA
                     FHSIPFALIDSEFAKQQLVLLTREWYMHPNGQLPAYEWAFGDVNPPVHAWATWRVFQI
                     DRKRTGGPGDLVFLERVFHKLMLNFTWWVNRKDAQGRNVFQGGFLGLDNIGVFDRSAP
                     LPTGGFINQSDGTAWMAMYALNLMRIALELAMHNRVYEDIATKFFEHFLHIAEAMANR
                     GNGGVGLWDEDDGFFYDVLNTSDDRLIPLKVRSMVGLIPLFAVEVVDQAQLDKVPDFA
                     ARLKWFLEYRPDLAALVAQWHVPGSGDRRLLSLVSGHRLERILRRLLDETEFLSDYGV
                     RAVSRIHREQPYTFRVGDTELSVRYQPGESDSGLFGGNSNWRGPIWMPVNYLLVESLQ
                     RFGHYFDDMLKVECPVGSGRYLTLTEVAGELSLRLSRLFLKDGNDRRPVLGYHPKLET
                     DPYFRDYVLFHEYFHGDTGRGVGASHQTGWTGLIAKLLQPRAPHETAAPEARPRMTTI
                     AHRARKEVTR"
BASE COUNT          876 a         1851 c         1839 g          894 t
ORIGIN      
        1 ccgctccggg acggctggcc gcccgcgacc ttccggcgcc ggccggaccg tgacgccgcc
       61 ctggcgcctt cgccctggtc gagcagtctc accagccgga tcaactcgcc cagggaccag
      121 gcttgaaacg ggcagccccg aggggtgtgg ggcggttccg cgtcggcgat ctcggagatg
      181 tgtcccaggc cggcgtcacc gagatgtgcc agcagtggct gcaccacctc ctgccggatc
      241 tgggcccgaa ccgcgtcggt gtttccctcc acccggagcc acgcctcgcc gaaggcgccg
      301 gccagccacg gccagaccgt tccctggtga tacgccgcat cccgttcgcg tggcccgccc
      361 cgatagtgcg gcacgtaggc cccgtcgccg ggtgccaggc tgcgcagccc gagcggggtg
      421 tggagcaggc gcttgacggt gccgaatacc tggcgggctc gatcgccctc gagcagagga
      481 aacggcagcc caccgaccgc gaagatctga ttggcacgga tggagccgtc cacccggccg
      541 ggaatccggt cggcatcgac cacatcgtag agacactcgc ggtcggggtt ccagaaccgg
      601 cctccgaagc tcgccagtcc cctgcctaac agcgacgtca agccggcatc cagcccggag
      661 gcgatgcgga gcgcgttgag ccagagcgcc tgaacctcca ctggcttgcc gatccgtggc
      721 gtcaccaccc agtcgcccac ccgcgcgtcc atccaggtga gctgcacccc gggttcgccc
      781 gacagcagga gtccgtctcc gtcggcccgg atcccgtagc gggtgccgtc ggcgtagcct
      841 tggacgatcc ggcggatggc gcgctccagc ggcacgcgcg cgggcgagtc cggcgcggcc
      901 tgcaggtact cccacgccgc gaccacgaac cagagtgagg catccaccgc attgaactcg
      961 ggggcatcgc cctgatcgac gaaccggttg gggaccatgc cttgcgatac ggtctcaccc
     1021 cacgccagca ggatatcgcg cgcttcgtcg agccgcccgg tggcgaggca gaggccccgc
     1081 agcgcgatga atgtgtcccg cccccagtcg gtgaaccagg gataccccgc aatgatggtc
     1141 tttcctgccc ctcgcgcgac cagatagctg tcggccgagc ggtggagccg gctggggaat
     1201 cgggctcgcc ggcggagttc ggcgctgcgg atcgaccgat acgtcgccag gggccgaccc
     1261 ctcaggaccc gatcgactcc tggaagtcct tcggccgcca gcatccacac cgcatcgccc
     1321 tgcgagagat cccagcgcaa ttcgccggga gagaagcaat cggtggtgtg gtcgaagccc
     1381 cggtcccgtt cctcatccag ctcgaagttg cggtaccaga gcggtgcgtg gtggtaatcc
     1441 ccgttggagg ccgacagcac ggccggcagc gaggcgtaag gctgccaccg cacccgggcg
     1501 ctgctcacgt ccgctccgga gtcgcagccg gggttctcgt ggtgcagggc gtgcgcgtca
     1561 cgtcccgaga ggaacggtcg caccaccagc gtcagccccg ccggcacccc ggtggccctc
     1621 caccggaggg ccaccgccga ggagccatgg gggacgaaga gctcgcactc gacggttgcg
     1681 tcgctgccca gctgccaggt ccaggccggc cacggctcca cctcaaaacc gggcccgccg
     1741 acgctggatg tggtggtcac attgggagcg tagcgctgcc gggtgaggaa ctcgcgggtc
     1801 ggggagccgc catcgtacgc tccatcgccg cgctccagcc aggcatcgaa cccgtccacc
     1861 aggacggtgc ggccggtggg tggggtgagc gcggccagca ggagggcgtg gtagcggcgg
     1921 gtccgggagc cgccgaccgt accggaggca aagcctccca ggccatcggc ctccagccac
     1981 tcggcggacg ggttctggtt catccccccg cctcgaaacc cggatacagc gtcatgccgc
     2041 cgtccacgaa gagggtggta ccggtgatgt aatccgcctc gtccgaggcc aggaagatgg
     2101 tggcccgtgc gatatcgtca gtttccccga ttcgcttgga ggggatcagc ttgaggaggg
     2161 cctgatacgc ctccggggtt tcccacgcgt cgcggttgat cggcgtgcgg atggccccgg
     2221 gcgcgacact cacgacccgg atcttgagcg gcgccacttc ctgggcgatg ctcttcatca
     2281 tcagcatcac gccacccttc gacgccgcgt aattcacgtg gcccgaccag gggatgacct
     2341 cgtggaccga gctcatgcag atgaacttgc cgagggcgcg ggacacttcg gggcgcatgc
     2401 cgcggcgctt gaactcccgt accgcctcgc gggcgcaaag gaactggccg gtcagattga
     2461 cctcgagcac ccggttccac tgcgccaggg tcatctcgtg gagcggtgca tcgcgctgga
     2521 tcccggcgtt ggccaccacg atgtccaccg tgcccatctc ggtcctcagc cgctcgaaca
     2581 tgccggcgac ctcgatctcc ttggagacgt cgcactgatg cgcgaaggca tggccgccgt
     2641 gggaccggat ctcctctact tccatgtcgg ccttgtccat ctcggcttcg acggggtagt
     2701 tgacgcacac gtccgcgccg gcttcggcca gggccatcgc cacggctttg ccgatccccg
     2761 agctggcgcc ggttacgaga gccttctggc cgatcagcag cttcgggatg gggcggcggt
     2821 cgttctcggc ggccgggcct ggcggcatca tggtggcagt caccgggtga cttcctttct
     2881 cgcgcggtgc gcgatagtgg tcatccgcgg ccgggcttcc ggcgcggcgg tttcatgggg
     2941 agcgcggggt tgcagcagtt tggcgatcag gccggtccag ccggtctggt gagaggcccc
     3001 aacgccccgt cccgtatcgc cgtggaagta ctcgtggaac aggacgtaat cgcggaagta
     3061 cggatcggtc tccagcttcg ggtgatatcc cagcaccggc cggcggtcat tcccgtcctt
     3121 gaggaacagc cgggacagcc gaaggctgag ctcgccggcc acttcggtca gggtgaggta
     3181 gcgtcccgag ccgaccgggc actccacttt gagcatgtcg tcgaaatagt ggccgaaccg
     3241 ttgcagcgac tcgaccagga gatagttgac cggcatccag atggggccgc gccagttcga
     3301 gttgccgccg aagagtccgg aatcgctctc tcccggttga taacggaccg acaattcggt
     3361 gtcgcccacc cggaaggtgt agggctgctc ccggtgaatc cgtgacaccg cgcggacccc
     3421 gtagtccgat aggaattcgg tctcgtccag caggcggcgg agaatccgct ccaggcggtg
     3481 gccggagacc agtgacaaca ggcggcggtc gccgcttccg ggcacgtgcc actgcgccac
     3541 cagcgcggcc aggtcgggtc ggtattccag gaaccatttg aggcgcgcgg cgaagtcggg
     3601 gaccttgtcc agctgggcct ggtccaccac ctccaccgcg aacagcggaa tcagtccgac
     3661 catcgaccgc accttgaggg ggatcagccg gtcatcgctg gtgttgagca cgtcgtagaa
     3721 gaacccgtcg tcctcatccc agagaccgac gccgccgtta ccccgattcg ccatggcctc
     3781 ggcgatgtgg aggaagtgct cgaagaactt ggtggcgatg tcctcatata cccggttgtg
     3841 catcgccagc tcgagcgcga tccgcatcag attgagggcg tacatcgcca tccacgcggt
     3901 gccgtccgat tgattgatga agccgccggt cggtaacggt gcgctccggt cgaacacccc
     3961 gatgttgtcc agcccgagga atccgccctg gaagacgttg cggccctggg cgtctttacg
     4021 attcacccac caggtgaagt tgagcatcag cttgtggaag acccgttcca ggaagacgag
     4081 gtctcccggg ccaccggtgc gcttccggtc gatctggaac acccgccagg tggcccaggc
     4141 atgcaccggc ggattcacgt cgccgaaggc ccactcgtag gccggcagct gaccgttggg
     4201 atgcatgtac cattcgcggg tgagcagcac cagctgctgt ttcgcgaatt cggagtcgat
     4261 cagcgcaaac gggatgctgt ggaacgcgag gtcccacgcg gcgtaccagg ggtactccca
     4321 ggtatccggc atcgagatga tgtcggcgtt gttgaggtgg gtccactcgt ggttgcgtcc
     4381 ccgtttccgg ctctcgggcg gagccgggtg cccccggtcg ccctggagcc actccggcac
     4441 gtcgtaatag aaaaactgct tgctccagat catcccggcg aaggcctggc gctgcaccag
     4501 gcgcgcgtcc gggtcggcca ggctcccctg cagctcggcg tagaactggt cggcctcccg
     4561 ctggcggctg gcgactatgg cgtcgaaccc cgcgaagggc agcgccagag gatcagccgc
     4621 caggcgtacg cggtaggtac gggatgcccc ggcggggatc tcgtctcgga accaggccgc
     4681 cactttggtg ccttctcccg cggggttgac cgcctccacc cgtccggaca ccacccgctc
     4741 gtggaaagcg tccttccaat agccggggtc ctggtcgatt ccaaagaccc ggctcgcgtt
     4801 ggtttcgttc tcggtgaaga gcagctcggg ggcctcggtg tacagggtgt aggttccccg
     4861 gacggggtgc gtcacggaca cgatccctgg accggctcgg cgcagcgcgg gccgcgagcc
     4921 tttgccccac gaccagacgt tgcgacacca cagctggggc agcacgtgca gggcggccgt
     4981 ctccggacca cggttgtgca ccgtgacccg catcaggatg tcctccggag aggccttggc
     5041 gtactctacc accacgtcga agtagcggtc ctgatcgaac acgccggtat ccagcagctc
     5101 gaattcggtg tcgggtgccc cgcggcgacg attctcctcg accagacggg cgtaggggaa
     5161 ttcgagttga ggatacttgt agagcatgcg cagataggaa tgggtcggcg tggcgtcgag
     5221 gaaatagtag agctccttca cgtcctcgcc gtggttgccc tcgccgttgg tcagtccgaa
     5281 gagccgctcc ttgaggatcg gatcgcggcc gttccagagc gcgagcgcca gacacaggtg
     5341 ctgggcatcg tcgctcattc cggccagccc gtcctcgccc caccggtagg cccggctccg
     5401 ggcgtggtcg tggggtaaat agtcccacgc ggcgccgtcg ggcccgtaat cctcccggac
//
LOCUS       DASWKS010000003         7235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3326347, whole genome shotgun sequence.
ACCESSION   DASWKS010000003 DASWKS010000000
VERSION     DASWKS010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3326347"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1427
                     /locus_tag="VGA78_00030"
     CDS             <1..1427
                     /locus_tag="VGA78_00030"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9892269.1"
                     /translation="EGNADSKYYNWNLNGIHVFHTGTWSATTSLGLQFEDRRLKTGRA
                     TTTNLIPGQQNVGQGTTTTSFETLTEERTLALYAQEEVRLFDDRLLVQGGLRAERSSV
                     NGDIDKYYVFPKLSGSYRFMDLLGTGSELKLRVAYGETGNQPLFGQKFTNLNTPQFGQ
                     ANGFSVAGAAGFPTIEPERLKEWEGGIDGNALNGRLTWDLTGFRRSTTNLLLQRVPAP
                     STGFTSQFFNGGEIENQGFEVGLGYTPIQGRNLQWVARGTFTSYRSEVVDLAGLPAFR
                     PPLSGFGGLGVTFIEEGQPLTQIIGRRLEADGSISPTNVQIGNSAPDFRVGFVNDVTY
                     KSFNLSFVLDWQQGGTVIDLTTFLYDDGRNAKDWGTPEGLARYECYLKGAMNCYMADA
                     TFLKVREVSVGVDLPKGWVRGLGWGVDNVRLNLSGRNLFSFQKYDGLDPEVANIGSAA
                     IRNNLDISPYPPSRSIFFSIGVGF"
     gene            1427..2881
                     /locus_tag="VGA78_00035"
     CDS             1427..2881
                     /locus_tag="VGA78_00035"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEX9892270.1"
                     /translation="MPTMPNTISTSRSPRRMLVAGLGAALLLSACSEFDLRNTNAPTV
                     EELTGTPSRAVLARTATGIFSQALNDVGGIIQQWGIYGREGYNLLGNDPRETGEEIRG
                     PQEAGGRAGQAWTGGYGAIRTINAYLAALPVGVGVTEQEVRASAGFAKTIKAWHMHRI
                     AVRTGALGMPIDVDKPITEPPAPFVSFAAAEEAVSALLDEGLADLQAGSAAFPFTVAP
                     GYVGFTTPATFTQFNRALAAKVLVHRATFLACAACWAQASTAMNASFVTAAGLPGSLA
                     TGVYYAYSTAAGEPLNPVSENIGSNRYWVHPSIVTGAQLRANGEPDLRLTSKVTQAPT
                     ARSLNELTGTHKPTLYNLAGTPTSADQGTDIAWIKNEELLLLRAEIRWNTADKAGAVD
                     DINLVRQHAGGLAASTLTAGSSDDAFITELLYNRVYSLMWEQGTRWIDARRYNRLSDL
                     PVDRPGDSRYNSMLVPAGECDARGLSVPCSPLGN"
     gene            3047..5014
                     /locus_tag="VGA78_00040"
     CDS             3047..5014
                     /locus_tag="VGA78_00040"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9892271.1"
                     /translation="MLLLALLLQQSAVARVEISPANAEIQVGQSVRLNARALDAQGNP
                     VPGIKINWFTGGGEGSVDSVGLVTGGYTGYVRVAAVAAVPGGRPIYGQATVRVLPLPI
                     TRIKLAPRPSRMAVGTRLTLRGTGYSTHNDVRNDPIAFSSSNERVVRITPDGRLTATG
                     PGSATISAKAGQGTATLVVDVVPTQIARLAIEARTDAGALPVGSGLNVRTGDVLRFKA
                     TAQDGSGRTVGDLAVRWSLEGGDGVAQIDEEGLFVAENAGKYTVVASIGSQSTEVPVT
                     VAARRVGRGLEVVGRVPVKLRGAEVWVHPNGQCAYYTTIADRIYAIDVSNPASPVIVD
                     SMLTDARHVNDVMTTEDGRYGVFSREGASDRKNGIVIFEASTPCHPKPISSFTETVSG
                     GVHSSYVYRGYVYLTDDATGSMRVIDIRDPYQPREVARWQTQQTEAGRYVHDIHIEDG
                     LAYLSYWNDGLVILDVGNGMKGGSPEKPVQVSQLKYDLNALYARVDQMYGLGARGTHT
                     AWRKGQYVFIADEVYASRPATGLKDGNDLTWGRLQVVDISNLDQPRIVAWYEPTDGGV
                     HNIWVEGDSLYMGSYQGGGRVLDISGELKGDLLRQGREMAWIFTADSLGHRPRATFTW
                     GAVVKNGLIYFNDINTGLWITRLEPKPTPVP"
     gene            complement(5093..6391)
                     /locus_tag="VGA78_00045"
     CDS             complement(5093..6391)
                     /locus_tag="VGA78_00045"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3536 domain-containing protein"
                     /protein_id="HEX9892272.1"
                     /translation="MPHSVVIHAHLYQPPREDPWTGQVPQEPTAAPFYDWNERITSEC
                     YRPLAPLLGRLSYNVGATLFEWLDREAPDLAEVVIQADRASVTRLGHGNAIAMPYHHL
                     ILPLASRRDQEIEVRWGIRDFERRYGRPPEGLWLPETAVDQVTLDVLAAAGIRFTILG
                     PHQVEVPPLFGGAGVVRTSGRRRLAVFVYDGRTSHDVAFGTLIKDAVTWYHRLSLPRD
                     DVRAPKLISLATDGETFGHHHVTGVAALGRVLERLQAAGILVDNYAAFLHRHPPREFL
                     RLVEPSSWSCAHGIERWRADCGCRLVAGTSQAWRTPLRQGFDQLRTEIDGLLAERGHV
                     VPDDPIAAQRTLPLDWHARRMFSSCGWFFDDIAGIEPRICLAHAVRAIELAGDRGPAL
                     LAALRNRLSEARSNDPNAGTGADVLDAIVGGRRHSLTIDD"
     gene            complement(6449..>7235)
                     /locus_tag="VGA78_00050"
     CDS             complement(6449..>7235)
                     /locus_tag="VGA78_00050"
                     /inference="COORDINATES: protein motif:HMM:NF020772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein
                     domain-containing protein"
                     /protein_id="HEX9892273.1"
                     /translation="YPGEGGYLEFHKIRWPGGLKLCRVTSPHMDLGGKQPYDPNVGRA
                     RAYKHAADYVGLLHRLRDMAQPLGGDLIATPFDTELFGHWWFEGVDFLGDVYRGLAGQ
                     QAVRPATASQHLDGRTDGRRFIKLAEGSWGANGDFSKWQNPETEWTWNRLGPLEDRYW
                     GVAARELSAGPSGRPTALTQATRELLLAQASDWQFIISTGAATDYAEKRFSGHCDALD
                     ALLTALETGQTESAVRLAAEHAKADDCFPDPLGAVAEVLNARD"
BASE COUNT         1261 a         2419 c         2378 g         1177 t
ORIGIN      
        1 tcgaaggcaa cgccgacagc aagtactaca actggaatct gaacggcatc catgtgttcc
       61 acaccggcac ctggtcggcc accacgtccc tcggccttca gttcgaagac cggcgcctca
      121 agaccggccg tgccaccacg accaacctga ttcccggaca gcagaacgtg gggcagggca
      181 ccaccacgac gtcgttcgaa accctcaccg aggagcggac cctggcgctc tacgcccagg
      241 aagaggtccg gctgttcgac gaccggctgc tggtgcaggg tggcctccga gccgagcgga
      301 gcagcgtcaa cggcgacatc gacaagtatt acgtcttccc caaactctcc ggctcctatc
      361 gtttcatgga cctgctgggg acggggagcg agctcaagct gcgcgtcgcc tacggcgaga
      421 ccggcaacca gccgctcttc ggccagaagt tcaccaacct caacaccccg cagttcggcc
      481 aagccaacgg gtttagcgtg gcgggcgcag ccgggttccc gaccatcgag ccggaacgcc
      541 tcaaggagtg ggagggaggc atcgacggca acgccctgaa tgggcggctg acctgggacc
      601 ttaccgggtt ccggcgcagc accaccaacc tgttgctgca gcgggtcccg gcgccgtcga
      661 ccggcttcac cagccagttc ttcaacggcg gcgagatcga gaaccagggg ttcgaggtcg
      721 ggttgggcta taccccgatt cagggtcgca acctgcagtg ggtggcccgg ggaaccttca
      781 cctcctaccg cagtgaggtg gtcgacctcg ccggcctgcc ggccttccgg ccgcccttgt
      841 cgggcttcgg cggcctggga gtcaccttca tcgaagaagg gcagccgctc acccagatca
      901 tcgggcgccg gctcgaagcc gacggctcca tcagccccac caacgtgcag atcggtaaca
      961 gcgccccgga cttccgggtg ggattcgtga acgacgtcac ctataagtcc ttcaacctga
     1021 gcttcgtgct cgactggcag cagggtggca ccgtcatcga tctgaccacc ttcctctatg
     1081 atgacggccg gaacgcgaag gattggggca cgcccgaggg cttggcgcgc tacgagtgct
     1141 acctgaaagg cgccatgaac tgctacatgg ccgatgcgac cttcctcaag gtccgcgaag
     1201 tcagcgtcgg cgtggatctc cccaagggct gggttcgggg tctgggctgg ggcgtcgata
     1261 atgtccggct gaacctcagt ggccgcaatc tcttcagctt ccagaagtac gacggtctcg
     1321 atcccgaagt ggcgaacatc ggctccgccg ctatccggaa caacctcgac atctcgccgt
     1381 atccgcccag ccgcagcatc ttcttcagca ttggagtggg gttctaatgc ctaccatgcc
     1441 taacaccatc tcaaccagcc ggtccccgcg gcgcatgctc gtcgcgggac tgggcgcggc
     1501 gctgctgctg agcgcctgct ctgaattcga tctccgaaac accaacgccc cgacggtgga
     1561 agagctcacc ggcacgccca gccgggccgt cctggcccgg acggccaccg gcatcttttc
     1621 ccaggcgttg aacgatgtgg gcgggatcat ccagcaatgg gggatctacg gccgggaagg
     1681 ctacaacctg ctggggaatg atccccgcga aaccggcgaa gagattcgcg gcccgcagga
     1741 agcgggcggc cgggccggcc aggcctggac cggtggatac ggggcgatcc ggaccatcaa
     1801 cgcctatctc gccgcattgc cggtgggcgt cggggtgacc gagcaggagg tccgggcctc
     1861 agccgggttt gccaagacca tcaaggcctg gcacatgcat cggattgcgg tgcgtacggg
     1921 cgcgcttggc atgccgatcg atgtcgataa gcccattacc gagccgccgg cgccgttcgt
     1981 ctcgttcgcc gcggcggagg aggccgtgag cgccctgttg gacgaagggc tggccgacct
     2041 gcaggcggga agcgcggcct tccccttcac cgtcgctccg gggtatgtcg ggtttaccac
     2101 gcccgccacg ttcactcaat tcaaccgggc gttggcggcc aaggtgctgg tgcaccgggc
     2161 cacgttcctg gcctgcgccg cctgctgggc ccaggcctcg accgcgatga acgcctcgtt
     2221 cgtcactgcg gccgggctcc ccggttcgtt ggccactggc gtgtattacg cctattccac
     2281 ggccgccggc gagccgctca atccggtgtc ggagaacatc gggtccaacc ggtactgggt
     2341 gcatccgtcg atcgtgaccg gggcccagct gcgggcgaac ggggagcccg acctccggct
     2401 caccagcaaa gtgacccagg cgccgacagc gcggtcgctg aacgaactca ccggcaccca
     2461 caagcccacc ctgtacaacc tggcgggaac cccgaccagc gcggaccagg gcacggacat
     2521 cgcctggatc aagaacgagg agttgttgct gctccgggcc gagatccgct ggaacaccgc
     2581 tgacaaggcg ggcgccgtcg acgacatcaa cctggtccgg cagcacgccg gcggactggc
     2641 ggcgtcgacg ctcacggcgg ggagttcgga cgacgccttc atcaccgagc tgctctacaa
     2701 ccgggtgtac tcgctgatgt gggagcaggg aacccgctgg atcgatgccc ggcgctacaa
     2761 ccggctcagc gatctgccgg tggaccgccc gggcgattca cgctacaaca gcatgctggt
     2821 cccggccggc gagtgtgatg cacgcggcct ttcggtgccc tgttcgcctt tgggcaacta
     2881 agcgctctct taacctctgg gcggcggccg gggaccggag catcggtttc ccggccgcgt
     2941 tgcacttacc ccattgacga ttgtcgattg acggttgacg attacgggcc ccggagaccg
     3001 gtccgcaatc gtcagtcgtc aatcgtcaat cgtcaatgag gcttgcatgc tcctcctcgc
     3061 tttgctgctg caacagtcgg ctgtcgcccg cgtcgaaatc tctcccgcca acgccgagat
     3121 ccaggtcggc cagtcggtgc ggctcaatgc ccgggcgctg gacgcccagg gcaacccggt
     3181 gccgggcatc aagatcaact ggttcaccgg tggaggtgag ggatcggtcg actcggtcgg
     3241 tctggtaacc ggcggctaca ccggctatgt ccgggtggcc gcggtagcag cggttccggg
     3301 tggacggcct atctacggtc aggcgacggt tcgggtgttg ccgcttccca tcacccggat
     3361 caagctggct ccccggccca gccggatggc ggtggggacg cggctgacgc tgcgggggac
     3421 gggctacagc acccacaacg atgtgcggaa cgatcccatc gccttcagct cctccaacga
     3481 gcgcgtggtg cgaatcaccc ctgacggccg gctcacggcc accgggcctg gcagcgccac
     3541 catcagcgcc aaggccgggc aggggaccgc cacgctggtg gtcgacgtgg tgcccaccca
     3601 gatcgcccga ctggccatcg aggcccggac cgatgcgggc gcccttccgg tggggtccgg
     3661 actgaacgtc cgcaccggcg atgttctgcg attcaaggcg accgcccagg acggctccgg
     3721 ccgaaccgtg ggcgatctgg cggtgcgctg gtcgctggaa ggcggcgacg gtgtggccca
     3781 gatcgacgag gaaggcttgt tcgtggccga gaacgccggc aagtataccg tggtcgccag
     3841 catcggttcc cagagtaccg aagtgccggt gacggtcgct gctcgccggg tgggacgggg
     3901 cctcgaggtg gtgggacggg tcccggtgaa gctgcggggc gctgaagtgt gggtccatcc
     3961 taacggccag tgcgcctact acactacgat cgccgatcgg atctacgcga tcgacgtctc
     4021 caaccccgcc agcccggtga tcgtcgattc gatgctgacc gacgcccggc acgtgaacga
     4081 cgtgatgacc accgaggatg gccgttacgg cgtgttctcg cgagagggcg cctccgaccg
     4141 gaagaacggc atcgtgatct tcgaggcgag cacgccctgt caccccaagc ccatctcgag
     4201 cttcaccgag acggtgtcgg gcggggtgca ctcgtcgtat gtctaccgcg gttacgtcta
     4261 cctgaccgac gatgccaccg gctccatgcg ggtcatcgac attcgcgatc cctaccagcc
     4321 cagggaagtg gcccgctggc agacgcagca gaccgaagcc ggccgctacg ttcacgacat
     4381 ccacatcgag gacgggctgg cctatctctc ctactggaac gacggcctgg tgattctcga
     4441 tgtgggcaac gggatgaagg gtggctcgcc cgagaaacca gtccaggtga gccagctcaa
     4501 atacgatctc aacgccctct acgcccgggt cgatcagatg tacggactgg gggcgcgggg
     4561 cacccacacc gcctggcgca agggccagta cgtcttcatc gccgacgagg tctacgcctc
     4621 tcgccccgcc accggtctga aggacggcaa cgacctgacc tggggccggc tgcaggtggt
     4681 cgatatctcc aacctcgacc agcccaggat cgtcgcctgg tacgagccca ccgacggcgg
     4741 cgtccacaac atctgggtgg agggcgattc gctgtacatg gggagctatc agggcggcgg
     4801 ccgagtgctc gatatctcgg gcgagctcaa gggcgatctg ctgcggcagg gaagggaaat
     4861 ggcctggatc ttcaccgccg actccctggg acaccggccc cgggccacgt tcacctgggg
     4921 cgccgtggtg aaaaacgggc tgatctactt caacgacatc aacaccgggc tgtggatcac
     4981 ccggctggag ccgaaaccga cgccggtgcc ttgactacat tgacgattga cgattgacga
     5041 ttacttaccc tccggtcctg agctggaaag cgggacgagt aatcgtcaat cgtcaatcgt
     5101 caatcgtcaa tgagtgtcgc cgccctccaa cgatcgcatc gagtacgtcc gccccggttc
     5161 ccgcgttggg gtcgttgctc ctggcctccg acagccggtt gcgcagggcc gccaggagag
     5221 ccgggcctcg atcacccgcc aactcgatgg cccgaacggc gtgggccaga cagatccgcg
     5281 gctcaatgcc ggcgatgtca tcgaagaacc agccgcagga ggagaacatc cttcgggcgt
     5341 gccagtcgag cggcagggtt cgttgggcgg cgatgggatc gtcgggcacc acgtgccccc
     5401 gttcggccag cagaccatcg atctccgtcc gcagctggtc gaacccctga cgtaacggcg
     5461 tgcgccaggc ctgcgacgtg ccggccacca ggcggcagcc gcagtcggct cgccaccgtt
     5521 cgatgccgtg ggcgcagctc caggagctcg gctccaccag ccgcaggaac tcgcggggcg
     5581 gatggcggtg caggaacgcc gcatagttgt ccaccagaat cccggccgcc tggagccgct
     5641 ccagcacccg gccgagcgca gcgacccccg tgacgtggtg atggccgaag gtttcgccat
     5701 cggtcgccag gctgatcagc ttgggggcgc gcacgtcatc ccgcggcagc gacagccggt
     5761 gataccaggt caccgcatcc ttgatcaggg ttccgaacgc gacatcatgg gaggtccggc
     5821 catcgtagac gaacaccgcc agccggcggc ggccgctggt tcgcaccacg cccgcgccgc
     5881 cgaagagggg cggcacctcg acctgatggg ggccgaggat ggtgaaccgg ataccagccg
     5941 ccgccaggac atcgagggtg acctggtcca ctgcggtttc cgggagccag aggccttcgg
     6001 gcggccggcc gtagcggcgc tcgaaatcgc gaatgcccca ccgcacttcg atttcctggt
     6061 ctcggcgtga cgcgagcggc aggatgaggt gatgataggg catggcaatc gcgttgccat
     6121 gccccagccg cgtcacgctg gcccgatccg cctggatgac cacctcggcc aggtcgggcg
     6181 cttcccgatc cagccactcg aacagggtgg ctcccacgtt atagctcaac ctcccgagca
     6241 gcggtgccag gggccgatag cactcgctgg tgattcgctc attccagtca tagaatggcg
     6301 ccgcggtagg ctcctggggt acctggccgg tccagggatc ttcccgggga ggctgataca
     6361 ggtgggcgtg aatgacgacg gaatgaggca cgggcgcgtc tacgatcaac ggtcaacggt
     6421 caacggttaa cagtgaacgg tccggcgatc agtcgcgtgc attcagcacc tccgccacgg
     6481 ccccgagcgg gtcggggaag cagtcgtccg ctttggcgtg ctccgccgca aggcggacgg
     6541 ccgactcggt ctgcccggtt tccagggcgg tgagcaaggc atccagggcg tcgcagtggc
     6601 cgctgaaacg cttttcggcg taatcggtcg cggccccggt ggagatgatg aactgccagt
     6661 cggatgcctg ggccagcagc agctcccgag tggcctgggt gagggcggtc ggacggcctg
     6721 acgggccggc ggacagctct cgcgcagcca cgccccaata tcgatcctcg aggggcccca
     6781 aacggttcca ggtccactcg gtctccggat tctgccattt gctgaaatcg ccgttggcgc
     6841 cccaggatcc ctccgccagc ttgatgaaac gccgtccgtc tgtccgtccg tccagatgtt
     6901 gagaggcggt cgcgggccgg accgcctgct gtcccgccag gccgcgatag acatcgccca
     6961 ggaaatcgac cccttcgaac caccagtggc cgaacagctc ggtatcgaac ggggtggcga
     7021 tcaagtcacc gcctaacggt tgggccatgt cccgcagccg gtgcagcagg ccgacatagt
     7081 cggcggcgtg cttgtaggcc cgggcccggc cgacattggg atcgtagggt tgcttgccac
     7141 ccagatccat atgtggactg gtcacgcggc agagcttgag cccccccggc caccggatct
     7201 tgtgaaactc gagatacccc ccctcgcctg ggtac
//
LOCUS       DASWKS010000004         6421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2957725, whole genome shotgun sequence.
ACCESSION   DASWKS010000004 DASWKS010000000
VERSION     DASWKS010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6421
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2957725"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /locus_tag="VGA78_00055"
     CDS             complement(<1..1211)
                     /locus_tag="VGA78_00055"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9892274.1"
                     /translation="MTDFSRGVPVALLLLAGCTRAAERSRLSFVSIDTTPPPPVSVTD
                     SLLRTGHSHDPTQWPVYGGDYGQGRFSPLDQIHSGNVQGLRPAWIWQLGEAESFQTTP
                     LVIGRAMYVTTPMVEQIQRVVKLDAATGQVLWDHPIRIGTALFCCGPNNRGAAAWGDK
                     IYLATLDARLIALRADSGTQVWEASVGDPLHGYGNTSAPVAFNGKVFIGTSGGEWATR
                     GFLKAYDAESGQPAWTWYTIPSPDQGGWWGEWTEKAPGTELSLNRDLPAERRDSAKYA
                     DSWQRGGGPIWMPASVDPGSGLLFVSVGNANPDYNGVTRPGDNRWTSSICAIRAADGT
                     LEWCWQWMPHDVWDYDGASPPFLFDLVREGETVPAVGVFTKVGFLYVLDRRTGSLITR
                     SDAYVPQENLF"
     gene            complement(1214..2356)
                     /locus_tag="VGA78_00060"
     CDS             complement(1214..2356)
                     /locus_tag="VGA78_00060"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEX9892275.1"
                     /translation="MTGRPMRFRINPFRVRAAVPQPSRAPIREFHRSLPGYQPTPLLE
                     LRQLAGSLGLASILVKDEGHRFGLKAFKGLGASWAIHRLRAVGGPLVTVSSATEGNHG
                     RAVAWTARQLGLRAVIFMTRHASPARIQAIRSEGALVELVDGNYEDAVRACAERSAAE
                     GWQVVADVGYDGYLEIPRWITAGYSTILGEFEEQRAAGQLPEPEVVVAQAGVGGFAAA
                     VVEHFLQRPRQPRIVIVEPSDADPLLESALTPDGRPAPSKGSQGSLMAGLNCSTVSLS
                     AWPVLRTGVDVFLSIQDHWALDAMRRYAHPAPGDPPVVAGESGAAGLAGLLALMEHEP
                     FALARAHLGLGPTTTVLLVVTEADTDPEAWRRIVNPHVLRKINSGR"
     gene            complement(2353..3507)
                     /locus_tag="VGA78_00065"
     CDS             complement(2353..3507)
                     /locus_tag="VGA78_00065"
                     /inference="COORDINATES: protein motif:HMM:TIGR01910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HEX9892276.1"
                     /translation="MVHVDPEYVIRLCQALVRINSVNPTLVPGAPGEAEIGRFTASTL
                     AGLGLEVAQHEPSAGRVSVTGRLPGTGGGKSLMLNAHYDTVGVEGMSEPFSGEVRDGR
                     LYGRGAYDMKGSLAASIGAIKAVLETGGALRGDLLVAAVADEEYGSLGTADILTRIRT
                     DGAVVTEPTALDICLAHKGYCWIEVTTTGRAAHGSKVDQGVDANMRMGWFLAELDGLE
                     RELRQRPPHPLVGPPSLHAALLQGGAGLSTYAPTCTLQIERRTVPGETEGQVMREIET
                     LLARIEARDSSFRASARAFFTRDPFEVAPEAPVVRALSRAFAGTVNRSPRYMGDTPWM
                     DSALTSAAGVETVVFGPGGTGAHAEVEWVDTASMVQCAEVLARTVVEYCA"
     gene            complement(3545..4495)
                     /locus_tag="VGA78_00070"
     CDS             complement(3545..4495)
                     /locus_tag="VGA78_00070"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9892277.1"
                     /translation="MNVTLADVVMARERLRGAFSPSPLVRLDVEGDAEIWLKLENLHP
                     IGSFKLRGAGNALLAAAPEELRAGAVTASAGNMAQGVAWWARRLGIPATAVVPERAPA
                     AKTLAVERLGGRVVRLPFDRWWSLLDGSETTTEPGCFIHPVANPLVIAGNGTLGLELV
                     EALPHIDTVLVPWGGGGLASGIATVLRELRPEASVIGCEVETATPLTASLAARRPMTV
                     AHTPSFVDGIGGKSMLPAMWPLAERLIAGSAVVALDQVRQAIRLLVARHRVVAEGAGA
                     VSVAAALADQARGITVCVVSGGNIQADVLAAVLKNADQPD"
     gene            complement(4492..5493)
                     /locus_tag="VGA78_00075"
     CDS             complement(4492..5493)
                     /locus_tag="VGA78_00075"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HEX9892278.1"
                     /translation="MPVRILNGAEVSRLLDMATCIDGMRKVLMALGRGQAIQPLRTVL
                     RLPRERGAFAVMPAQVDDPDAFGLKVITVFPGNEGTRYDSHQGAVLLFEPAHGTLVAV
                     MDAASMTAIRTAAVSGVATDALARPDAADLAILGTGVQARTHLEAMRVVRPIRQVRVW
                     SRDSNHRREFADWARKRFGLDVKTADTAQAAVTGADLICTVTSSRTPVLMGSWIRPGA
                     HLNAVGSSLAAARELDTDAVRRARLFVDRRESALNEAGDFLIPRAEGAVDDSHILGEL
                     GDLLLDRVKGRERPEDVTLFKSLGLAVEDVAGAHLVWREAESRNVGTVIELGGLRDA"
     gene            complement(5577..5981)
                     /locus_tag="VGA78_00080"
     CDS             complement(5577..5981)
                     /locus_tag="VGA78_00080"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX9892279.1"
                     /translation="MQILPSPDKDSQTRAIIGAGMNVHRFLGSGFLEVVYQEALAIEF
                     GLRGVPFVREASFSILFRERLLQSSFRVDFLCFGEVLVELKAVRMTTSADESQVLNYL
                     KASGKARRCCSTSEEGALSSSDSLEVMTVPSA"
     gene            6174..>6421
                     /locus_tag="VGA78_00085"
     CDS             6174..>6421
                     /locus_tag="VGA78_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892280.1"
                     /translation="MAPGAEQAPVVTRHQITLRGTALKYSVTTGMMPVKNPEGVTEAQ
                     IFFIAYTLDGAQPGTRPLMFSFNGGPGSSSVWLHLGALG"
BASE COUNT         1076 a         2238 c         2110 g          997 t
ORIGIN      
        1 ttgaagaggt tctcctgcgg gacgtaggcg tcgctccgag tgatcaggct gccggtgcgg
       61 cgatcgagaa cgtagagaaa ccccaccttg gtaaacacac ccaccgccgg cacggtttcg
      121 ccctcgcgta ccagatcgaa caggaagggc gggctcgcgc cgtcgtagtc ccagacgtcg
      181 tgaggcatcc actgccagca ccactccagg gtgccgtccg cggcgcggat ggcgcagatg
      241 ctcgaagtcc aacggttgtc tcccggtcgg gtgaccccgt tgtagtccgg gttggcgttt
      301 ccaaccgaca cgaacagcaa acccgacccg ggatccaccg aggcgggcat ccagatggga
      361 ccgccgcccc gctgccagct gtcggcgtat ttggccgagt cacgccgctc tgccgggaga
      421 tcgcggttga gagacaactc ggtgcccggc gccttttcgg tccactcacc ccaccagccc
      481 ccctggtccg gggaaggaat ggtgtaccag gtccaggccg gctgccccga ttcggcatcg
      541 tacgccttga ggaagccgcg ggtggcccac tcaccgcccg aagtaccgat gaagaccttc
      601 ccgttgaagg cgaccggcgc cgaggtgttg ccgtagccat gcagcggatc cccgaccgac
      661 gcttcccaga cctgggtacc gctgtccgcg cggagcgcga tcaggcgggc gtcgagggtg
      721 gccaggtaga tcttgtcgcc ccaggcggcc gccccccgat tgttcgggcc gcaacagaac
      781 agggcggtgc cgatccgaat gggatgatcc cacagcacct gcccggtggc ggcgtcgagc
      841 ttcaccaccc gctgaatctg ctcgaccatc ggagtggtaa cgtacatcgc gcggccgatg
      901 acgagcggcg tggtctgaaa cgactcggcc tctcccagct gccagatcca ggcgggccgc
      961 aggccctgca cattccccga gtggatttga tccagcgggg aaaaccgtcc ctgaccgtag
     1021 tcgcccccat agaccggcca ctgggtcgga tcgtggctgt gaccggtccg aagcagcgaa
     1081 tcggtgacgc tgaccggcgg cggcggagtg gtgtcgatgc tgacgaagct cagccgggac
     1141 cgctcggcgg cgcgggtgca gccggcaagg agcagcagcg cgacgggtac tcccctggaa
     1201 aagtcagtca cgttcaccgt ccactgttga tcttgcgtag tacgtgaggg ttcacaattc
     1261 tccgccaggc ctccggatcg gtgtcggctt cggtcaccac cagcagcacc gtggtggtgg
     1321 ggccgagtcc gagatgggcc cgcgccaggg cgaagggttc gtgctccatc agggccaata
     1381 ggccagccag tccggccgcc ccgctctcgc cggcgacgac cggcggatcg cccggtgcgg
     1441 gatgggcgta tcgccgcatc gcgtccagcg cccagtggtc ctgaatactc aggaacacgt
     1501 ccaccccggt ccggagcact ggccaggcgc tgagcgacac agtgctgcag ttgagaccgg
     1561 ccatcagtga accctgcgat cctttggagg gagccggccg gccatcgggc gtcagggccg
     1621 attcgagcag cgggtcggcg tcggacggct cgacgatgac gatgcgaggt tgccgcggcc
     1681 gctggagaaa atgttccacc actgcggccg cgaaaccgcc gaccccggcc tgcgccacaa
     1741 ccacctcggg ctccggcagc tgccccgcgg cgcgctgctc ctcgaattcg cccaggatgg
     1801 tgctgtagcc cgcggtgatc cagcgaggga tctccagata gccgtcgtac cccacgtccg
     1861 ccaccacctg ccacccctcc gccgcactcc gttcggcgca cgcgcgaacc gcgtcctcgt
     1921 agttcccgtc caccagctcc accaaagcgc cctcgctccg aatcgcctgg attcgggcgg
     1981 gggaggcatg gcgggtcatg aagatcaccg cccgcaggcc gagctggcgg gcggtccagg
     2041 cgaccgctct gccgtgattg ccctcggtcg cgctggagac cgtgaccagc gggcctccca
     2101 cggcgcgaag ccggtgaatg gcccaggagg ctcccagtcc cttgaacgcc ttgagtccga
     2161 agcggtggcc ttcgtccttg accaggatgg aggccaggcc cagggaaccc gccagctggc
     2221 gcaactccag cagcggcgtg ggctggtagc ccggcagcga gcggtggaat tcccgaatcg
     2281 gggcccggga aggctgaggt accgccgccc gcacccggaa cgggttgatc cgaaaccgca
     2341 tcggccgccc ggtcacgcgc agtactccac cacggttcgg gccaacacct cggcgcactg
     2401 taccatcgag gcggtatcca cccactcgac ctccgcgtgc gccccggttc ctccgggccc
     2461 gaacaccacg gtttccacgc cggcggcgct ggtgagcgcg ctatccatcc agggcgtatc
     2521 acccatgtat cggggcgagc ggttcacggt gccggcgaaa gcccgagaca gagcccgcac
     2581 caccggggct tcgggcgcga cctcgaaggg atcgcgggtg aagaacgcgc gggccgaggc
     2641 gcggaacgaa gagtcgcggg cctcgatccg ggccagcagg gtttcgatct cccgcatgac
     2701 ctgcccctcg gtttcccccg gcacggtgcg gcgttcgatc tgcagggtgc aggtcggggc
     2761 gtaggtgctg aggccggcgc cgccctggag caaggcggca tgcagtgatg ggggaccgac
     2821 cagcggatga ggcggacgct ggcgcagctc ccgctccaga ccgtcgagct cggccagaaa
     2881 ccagcccatc cgcatgttgg cgtccactcc ctgatcgacc ttgctgccgt gggcggcccg
     2941 cccggtggtg gtgacttcga tccagcaata gcccttatgg gccagacaga tgtcgagcgc
     3001 ggtcggctcg gtcaccaccg cgccatcggt gcgaatccgg gtgaggatgt cggccgtgcc
     3061 gaggctgccg tactcttcgt cggccaccgc agcgaccagc agatcgccgc gcagcgctcc
     3121 tccggtctcg agcaccgcct tgatggcgcc gatgctcgcc gccaggctcc ccttcatgtc
     3181 gtacgcgccg cggccgtaca accgcccgtc ccgcacctcg cccgaaaacg gctcgctcat
     3241 gccctcgacg cccaccgtgt cataatgggc gttgagcatg aggctcttcc cgcccccggt
     3301 gcccggcaac cggccggtga cactgacccg acccgcactg ggctcgtgct gtgccacctc
     3361 gagccccagg ccggccaggg tagaggcggt gaatcggccg atctccgctt cgcccggggc
     3421 gccggggacc agtgtgggat tcaccgagtt gatgcggacc agggcctggc agaggcggat
     3481 gacgtactcg ggatcgacgt gaaccatggg gccggcggat tgtatgcaaa acaggcgttg
     3541 gtcgctagtc gggctggtcg gcgttcttca agaccgcagc caggacatcg gcctggatgt
     3601 ttccgccgga gaccacacac acggtgattc cccgggcctg atccgccagg gcagccgcca
     3661 cgctgacggc accggcacct tcagccacga cgcgatgccg ggccaccagc agccggatgg
     3721 cctgccgcac ctggtccagc gcgaccaccg cactcccggc gatgagccgt tcggccaggg
     3781 gccacatggc ggggagcatg ctcttgcccc cgatcccgtc gacgaagctg ggggtgtgcg
     3841 ccaccgtcat gggccggcgg gcggcaaggg aggcggtgag cggcgtcgcg gtttccactt
     3901 cgcagccgat cacgctggcc tcgggccgaa gttcccgcaa gacggtcgcg atccccgagg
     3961 cgagtccccc gcccccccac ggcaccagga cggtatcgat gtgcggcaga gcttcgacca
     4021 gctccagccc gagggtcccg ttccccgcga tcaccagggg gttggccacc gggtggatga
     4081 agcagccggg ctcggtggtc gtttcactgc catcgagcag ggaccaccac cggtcgaacg
     4141 gcaaccggac gactcgtcct ccgagtcgct cgaccgcgag ggtcttggcg gccggggccc
     4201 gctccgggac caccgccgtg gcgggtattc ccagtcgccg ggcccaccag gccaccccct
     4261 gggccatgtt gccggcgctg gcggtgaccg ccccggcgcg cagctcttcc ggcgcggccg
     4321 ccagcagcgc gttgccggcg cctcgcaatt tgaaggagcc gatcggatgg agattctcga
     4381 gtttgagcca gatctcggcg tcgccctcga cgtcgagccg aaccagaggt gacggcgaga
     4441 aggcaccccg gagtcgttcc cgggccatga cgacatccgc cagggtcacg ttcatgcgtc
     4501 tcggagcccg cccagctcga tgacggtgcc gacgttccgg ctctccgcct cgcgccacac
     4561 caggtgcgcg ccggcgacgt cttccacggc gagacccagc gacttgaaca gggtgacgtc
     4621 ctcgggccgt tcccgcccct tgactcggtc gaggagcaga tcacccagct cacccaggat
     4681 gtggctgtcg tcgacggcac cttccgcgcg cggaatcagg aagtcgccgg cttcgttcag
     4741 agccgactcc cggcggtcga cgaacaggcg ggcccgccgc accgcgtcgg tatcgagctc
     4801 gcgcgccgcc gcgagactgg agccgaccgc attcaggtgg gctccgggac ggatccaact
     4861 ccccatcagt accggggtcc gggaggaggt gacggtacag atcaggtcgg cccccgtcac
     4921 tgcggcctgg gcagtgtcgg cggttttcac gtcgagcccg aaccgcttcc gggcccaatc
     4981 ggcgaattcc cggcggtggt tcgagtcgcg gctccagacc cgaacctgcc ggatcggccg
     5041 gaccacccgc atggcctcga ggtgggtccg cgcctgcacc ccggtcccca gaatggccag
     5101 atccgccgcg tcggggcggg ccagcgcgtc ggttgcgacc ccggagacgg cggcggtgcg
     5161 gatggcggtc atcgaggctg cgtccatgac cgccaccaga gtgccgtgcg cgggctcgaa
     5221 cagcaggacc gcgccttgat ggctgtcgta acgggtgcct tcgttccccg gaaagaccgt
     5281 gatcactttg aggccgaagg cgtcggggtc atcgacctgc gccggcatga ccgcgaacgc
     5341 cccgcgctcc cgcggcagcc ggagcacggt gcgcaacggc tgaatcgcct gcccccggcc
     5401 cagcgccatg agcaccttcc gcatcccgtc gatgcaggtc gccatgtcga gcaaacggga
     5461 gacttcggct ccattgagaa tccgaaccgg cacgttctga tccttgggaa ggagtctgaa
     5521 cttatcgtgg ttcggggtcc ttggtcatag tccacggatt acgcggattc actggattac
     5581 gcggatggta cggtcatgac ctccaaggaa tcgcttgaag acaaggctcc ttcctccgaa
     5641 gttgagcagc aacgacgggc cttccccgaa gctttcaaat agttcaacac ctgggactcg
     5701 tcggccgacg ttgtcattcg aaccgccttc agttcaacca gcacctcacc gaagcagaga
     5761 aaatccacgc gaaatgaaga ttgcagcagt cgttctcgaa acagaatcga aaagctcgct
     5821 tcccgaacaa aggggactcc tcgcagtccg aattcaatgg cgagcgcctc ctgatacacc
     5881 acctcgagga aacccgaccc cagaaaccga tgtacgttca tcccggcacc aataatcgcc
     5941 cgagtctggg agtccttgtc gggtgagggt aatatctgca ttcagatccg tgtaatccgg
     6001 agaatccgtg taatctgtgg accagattgt gaaggccccg gaccctaaac ctgcgaacgg
     6061 gtatcctctt tatgctaaga tctgtctgcc tggcagctgt cctcctcgtg ccacaagccc
     6121 tcgtcgcagt ccaacagcgg cagccagccg atactgctcg cccggccccg ccggtggcgc
     6181 cgggcgccga gcaggcgccg gtagtcaccc ggcatcagat cacgctgcgc gggacggccc
     6241 tcaagtacag cgtcactacc ggcatgatgc cggtgaagaa cccggaaggt gtgaccgagg
     6301 cccagatctt cttcatcgcc tacacgctgg acggggccca gccgggaacc cggccgctca
     6361 tgttctcctt caacggcggg ccgggctcgt cctcggtttg gctccacctg ggggcgctgg
     6421 g
//
LOCUS       DASWKS010000005         3453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1849808, whole genome shotgun sequence.
ACCESSION   DASWKS010000005 DASWKS010000000
VERSION     DASWKS010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1849808"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VGA78_00090"
     CDS             <1..227
                     /locus_tag="VGA78_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892281.1"
                     /translation="APHLNVSVFARGLLDRLVTRIYFPDLAAANAADPVLSRIADPGA
                     HATLVARAEAGSLRFDIHLQGEQETVFFAL"
     gene            217..1563
                     /gene="pcaB"
                     /locus_tag="VGA78_00095"
     CDS             217..1563
                     /gene="pcaB"
                     /locus_tag="VGA78_00095"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HEX9892282.1"
                     /translation="MPSDRLFGPTFTTDVMADAVSDRAWVQAMLDVEAALAAAEERAG
                     VIPAGTATMIAAGCSSDRYDIGALGRAAAEAGNPVIPLVKALTRAVPAEASGWVHWGA
                     TSQDILDTAMVLLVRRGLNLLLSDLDAIAAACARLSHEHRQTVMLGRTFLQPAVPITF
                     GLKVAGWLVATLDARRRLAELRASGLAVQLGGAAGTLASLGADGPRVVRLMAEELALA
                     EPVVPWHSARGRIAEVGAALGVTCGVMGKIARDVALLMQAEVGEVAEPTAPGRGGSSS
                     MPHKQNPVAAMAVEAGVRRAHALVGVLLGAMLQEHERAVGGWHAEWETVGELFRLSAG
                     AVVRVRDVVDRLHVDPVRMRANLDATHGLPLSEHLALLLARLMGRGEARALVERAIQR
                     CRTSGRHLRDELLADPTVTTHLTAAELDEALDPARYLGATQVFIDRALALYRSTIS"
     gene            1790..2191
                     /gene="pcaC"
                     /locus_tag="VGA78_00100"
     CDS             1790..2191
                     /gene="pcaC"
                     /locus_tag="VGA78_00100"
                     /EC_number="4.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR02425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047575 - 4-carboxymuconolactone
                     decarboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxymuconolactone decarboxylase"
                     /protein_id="HEX9892283.1"
                     /translation="MIDDISDRGMVVRRQVLGDQHVERAMAAATDLTHDFQQFITRYV
                     WGEIWTRPGLDRRTRSCITVAMLVALNRPEELALHLRAAMTNGVTRAEIKEVLLQTAI
                     YCGVPAANAAFAIAQRVLGDAEGPHPPLAAR"
     gene            3241..>3453
                     /locus_tag="VGA78_00105"
     CDS             3241..>3453
                     /locus_tag="VGA78_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892284.1"
                     /translation="MVSAIGLTGVIYGGTWWWYYLSLTGVHLVIVVIGALVGLFRLSL
                     APIIVVIEKAPWTRALRRSWSLMRHNT"
BASE COUNT          526 a         1210 c         1084 g          633 t
ORIGIN      
        1 aggcccccca cctgaacgtc tcggtgttcg cccggggtct gctcgaccgc ctcgtgaccc
       61 gcatctactt cccggacctg gcggcggcga acgccgccga cccggtgctg tccaggatcg
      121 ccgatcccgg cgctcacgcc accctggtcg cccgcgccga ggcagggtcc ctgcgcttcg
      181 acatccatct gcaaggcgaa caagagacgg tcttctttgc cctctgatcg gctattcgga
      241 cccaccttca ccacggacgt gatggccgac gcggtgagcg accgggcctg ggtccaggcc
      301 atgctcgacg tcgaggccgc gctggccgcc gccgaggagc gggcgggggt tatccccgcc
      361 ggcaccgcaa caatgatcgc cgcgggctgc agctccgacc ggtacgatat cggtgccctc
      421 ggccgagccg ccgcagaagc aggcaacccc gtcatccccc tcgtcaaggc gttgaccagg
      481 gccgtcccgg cggaagcatc cggctgggtg cactggggcg ccaccagcca ggacatcctg
      541 gatactgcca tggtgctcct cgtgcggcga gggctcaatc tgctgctttc cgaccttgac
      601 gccatcgccg ccgcgtgcgc ccggttgtcc cacgagcacc ggcagaccgt gatgcttggc
      661 cggacgttcc tgcagccggc tgtccccatc acgttcgggc tgaaggtggc tgggtggctc
      721 gtggccacgc tggatgcccg ccgccggctg gcggagctgc gggcgagcgg gctcgcggtc
      781 cagctcggtg gcgcggccgg caccctcgcc tcgctggggg ccgacgggcc aagggtcgtc
      841 cgcctgatgg ccgaagagct ggcgctcgcc gagcccgtgg ttccctggca cagcgcgcgg
      901 ggccggatcg ccgaggtggg tgccgccctc ggggtgacct gcggggtgat gggcaagatc
      961 gcacgcgacg tcgccctgct catgcaggcc gaggtgggcg aggtggcgga accgaccgcc
     1021 cctggacggg gtgggtcctc cagcatgccg cacaagcaaa acccggtggc tgccatggcc
     1081 gtcgaagccg gtgtgcggcg ggcccatgcc ctcgtcggcg tgctgctggg ggccatgctc
     1141 caggagcatg agcgggcggt cggtgggtgg cacgccgagt gggaaaccgt cggggagctg
     1201 ttccgcctca gcgccggtgc cgtggtccgg gtccgggacg tcgtggatcg gctccacgtc
     1261 gaccccgttc gcatgcgggc caacctggat gccacccatg gcctgccgct cagcgaacac
     1321 ctggcgctct tactcgcacg gctcatgggc cggggcgagg cccgcgccct cgtcgagagg
     1381 gccatccagc ggtgccgcac cagcgggcgt cacctgcggg acgagttgct cgccgatccc
     1441 accgtcacca cccacctcac ggccgccgag ctggatgagg ccctcgaccc tgcccggtac
     1501 ctcggcgcga cccaggtgtt catcgatcgg gccctcgccc tgtaccggtc gaccatctcc
     1561 tgagacctac cgccgtgccc agcatcgaca ccgccagcct ctcgctccag cccaaacatc
     1621 tcaccaccaa ggcaccaaga caccaccggg ccttcccgag caaggagttc caggcctctg
     1681 aacaggcttc gctttcccct cgcccacgag tctctttgtg ccttgtcccg cccttggcgg
     1741 gattggtggt tgaactgcaa tattcggatt cagacaacgg gggaacccca tgattgatga
     1801 catctccgac cgtgggatgg tcgtgcggcg acaggtcctc ggcgaccagc acgttgagcg
     1861 ggccatggcg gccgcgaccg acctcaccca cgacttccag caattcatca cccgctacgt
     1921 gtggggggag atctggacac gtcccggtct cgaccggcgc acccggagct gtatcaccgt
     1981 cgcgatgctc gtggcgctca accgacccga ggagctggcg ctgcaccttc gggcggccat
     2041 gaccaacggc gtcacccgcg cggagatcaa ggaggtgttg ctgcagaccg ccatctactg
     2101 cggagtgcct gcagccaacg ccgccttcgc catcgcccag cgggtcctgg gcgacgccga
     2161 gggcccccac ccaccgctcg ccgctcgctg agcccggccc ggtccgtcct ccctgccgag
     2221 ggcacgttcg acctgtgtga tcccgctttg aggggacgcc cttaaataag taagtagccc
     2281 tatgtgttct gatggctatt ggcatgggtg ctgcgtcaat tcgctgggca ggaaggccgc
     2341 gcccggctga tgcgccacta ccccggcacc ctccgggagg aaagcccaat tcccgaaccc
     2401 tccagtagcc gctgaggccc gcacccgcat gcgcaacagc ttcgccccag ttctctggct
     2461 tccgacggca ggcacctagc ccatgggggg acgggcttgc ccttgcactc gccaaggaag
     2521 ttgtctcgcc gcccgatcac tggttggtga cgttctgtgc ccctccagga ccatcgagcc
     2581 gagggcgtag tgccgtcatg tttcgcctgt tctccgaagg ccggcggcga aactgaatta
     2641 tttaagggcg tcccatgctt ccctcaaacc aattggcacc gtcccagatc atggacgcat
     2701 tactggattg tgctgcttga catcggcctt cgggatagcc atgctccgtt ctcgcggcct
     2761 cggattgccg agaatccagc ccggccggtg cgacgagcga gccagggtac ctccagatgg
     2821 ccacatcctc agggcagtat gaatagatca gtgcccgatc tgaaaccgat gtccaccgga
     2881 gatctcctgg atcggacagc ccgaatgtac cgactccatc tccgtcccat gctggcaata
     2941 ctgctcgtcc caaccctcgg gatgtttcca ttcgaggctt ggctagcccg gaaatacggc
     3001 gtatggatcc gcgtgcagat tggcctcgac cccctggcag ttcccttgtt cacgctgttt
     3061 ctgctcatca gtaactcagc gtacgtcatt ggaggcgcag ccctcattca ttacctcagc
     3121 cagcgatgta tggcccgacc gtctggtgtt tggtcatcct accgccgcac gctaggctcc
     3181 gcgctcacaa tcagttgggt ttccttcctg gtgtctctcc tctggtgtgg tcccgtcgcc
     3241 atggtatccg caatcgggct gacaggtgtg atctatggag gcacctggtg gtggtattat
     3301 ctttccctta ccggcgtcca cctcgtaatt gtggtgatcg gggccttggt ggggttgttt
     3361 cgcttgtccc tcgccccgat tatcgtcgtc atcgagaagg ccccatggac ccgtgccttg
     3421 cgtcgtagct ggagcttgat gcgtcacaat acc
//
LOCUS       DASWKS010000006        33978 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1110312, whole genome shotgun sequence.
ACCESSION   DASWKS010000006 DASWKS010000000
VERSION     DASWKS010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 33978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33978
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110312"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="VGA78_00110"
     CDS             complement(<1..771)
                     /locus_tag="VGA78_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX9892285.1"
                     /translation="MSITRVLVANRGEIALRIIRACHEEGLEAVAVYSDADRSSPFVR
                     AADRAMRIGPAAAPESYLRMDRLVDAARDADAQAIHPGYGFLAERAEFAELVEQAGLV
                     FVGPPASAIRAMGDKTEARRRMVAAGVPVVPGGTGALTDAGLARALASQLGYPVLVKA
                     VAGGGGRGMRLVEREDQLAGALQSAGSEALKAFGDASVYLEKYILRPRHVEIQVLADQ
                     GRTVHLGERECSIQRRHQKLVEEAPSIAVTPALRQRMGD"
     gene            complement(773..2326)
                     /locus_tag="VGA78_00115"
     CDS             complement(773..2326)
                     /locus_tag="VGA78_00115"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX9892286.1"
                     /translation="MPDPRELLQDLHQRQSQAEQGGGADRITQQHKKGKLTARERLDL
                     LLDPGSLVELDRFVTHRATGFGLEELKFPGDGVVTGYGRVGGRLVYVFSQDFTVFGGS
                     LSETHAQKICKVMDLAVRNGAPVIGLNDSGGARIQEGVASLGGYADIFLRNTLASGVV
                     PQISVILGPCAGGAVYSPAITDFVFMVRGVSYMFVTGPNVVKTVTHEEVTFDQLGGAD
                     VHGETSGIAHAVFDSEPECLSAVRDLLDFLPPNNLEDPPLHPTDDPPDRRDNGLLDVV
                     PAHPAQPYDMHRVVAQVVDHGRFVEVHAGFAGNILTGFARLGGQSVGVIANQPAVLAG
                     VLDINASVKAARFIRFCDAFNIPLVTFVDVPGFLPGVGQEHGGIIRHGAKLLYAYCEA
                     TVPKLTVITRKAYGGAYDVMSSKHIRGDLNLAWPTAEIAVMGPKGAVEILYRDRIAQA
                     QDSAAETQTLIDEYTRAFAHPYAAAERGYVDDVIDPRDTRPRLIDGLRMLRTKRDRNP
                     PKKHGNIPL"
     gene            2517..3089
                     /locus_tag="VGA78_00120"
     CDS             2517..3089
                     /locus_tag="VGA78_00120"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEX9892287.1"
                     /translation="MRKAGLSLILGALAAACEPASSDDMLMTDVRFSSARTPTGAASF
                     VAPASGGEEVPARDTRGHGTAVFHLNSDGTELEYRLIASNIENVVQAHIHLEAPGVNG
                     PIVVFLYGLVAPGGGRTDGILAEGTITVADLTGPLTGEPFSALLDAIRAGNAYVNIHT
                     NDGIDPPNTGPGDFPGGEVRGQIKGGHVDH"
     gene            complement(3086..3727)
                     /locus_tag="VGA78_00125"
     CDS             complement(3086..3727)
                     /locus_tag="VGA78_00125"
                     /inference="COORDINATES: protein motif:HMM:TIGR01509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9892288.1"
                     /translation="MLFDLDGVLVDSRPCIDRIWRKWAAARQLDAERFIRQAHGRRTS
                     ETLRSVAPELDIQAEVAALDAMEAIEIEGLGPTPGAASLLSALPRRYWAVVTSGSRAV
                     ASLRLRTSGLPLPDVFVTGEDVRQGKPAPEPYLLAASRLELSPADCLVVEDSPAGVAA
                     ARAAGMTVIAVLTTHPGSALRAAHGCIPGLECLTLRRHGTGLILNTSTQYLVS"
     gene            complement(3772..4260)
                     /locus_tag="VGA78_00130"
     CDS             complement(3772..4260)
                     /locus_tag="VGA78_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892289.1"
                     /translation="MSAPPDPVRALLRHTLATLAYRGGKVLREVGDSFPSYQPGEGTR
                     PPLRILAHINDLLDWMRQLCEGRHVWNDSVPGSWDSEVQRFHRTLAEVDGYLASEQPL
                     GSSPEQLFQGPIADALTHVGQLALLRRRAGRPVRGENYFKADIVAGRMGPEQNRARVE
                     FD"
     gene            complement(4257..4769)
                     /locus_tag="VGA78_00135"
     CDS             complement(4257..4769)
                     /locus_tag="VGA78_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892290.1"
                     /translation="MDPLVLTLRLLHVGFGVFWAGAVMFSTFFLMPAVADAGPDGGKV
                     MAALQRRRILEVLPLVALITIGSGFWLYFRMANGDPAWARSRVGMALGVGGLAAVLAL
                     IAGLTVMRPANLKAMALAASVMKMSEGPDRAAQMVVLQGLRRRGVLAARVIALLLMVT
                     TALMAVARYL"
     gene            complement(4835..5941)
                     /locus_tag="VGA78_00140"
     CDS             complement(4835..5941)
                     /locus_tag="VGA78_00140"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HEX9892291.1"
                     /translation="MTLTVPRVAAPIVPTFPVRDGARFLREVRVEVDGYFRERGLSTK
                     ANATMVAKTVTMLALTFVPYGLILSGQFTPAAMLVFALLVGLGMAGIGFSVAHDALHG
                     AYSDKPLVNRALGFTMDLIGGSGYLWKITHNIIHHTYTNIHGTDEDLAVSPLLRLSPH
                     AERRWYHRYQHLYALVLYAMTTLFWVFVKDYKYLLKRDLGPYADRRHAPGDVAELVAG
                     KVVYYGWSVVIPLLVIDLPWWQILLGMLAAHLVAGFALGIVFQLAHVIEETAHPEPDQ
                     AGAMPDNWGVHEMETTANFGPESRLLRWYVGGLNYQVEHHLFPRICSIHYPAISPIVR
                     RLAAEHGLPYHSHSTFIGAVRSHLRTLQRLGAQP"
     gene            complement(5949..6182)
                     /locus_tag="VGA78_00145"
     CDS             complement(5949..6182)
                     /locus_tag="VGA78_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892292.1"
                     /translation="MSTHKVEQRRLIHHGREFHFVSYEGKPANLPRGEAAVAPMWYLM
                     SSGKRHPVMPYLLGQPVTEVDQGLLEWVRAQGL"
     gene            complement(6295..7038)
                     /locus_tag="VGA78_00150"
     CDS             complement(6295..7038)
                     /locus_tag="VGA78_00150"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HEX9892293.1"
                     /translation="MTHPSLDHTAHRPWPVPPRPWSGRQIWHDLAFLHWPVPVTVLRH
                     LVPEPLVVQEYQSSAWVGVIPFWMSGVTLRGVPALPGLSTFPELNVRTYVTLQDRPGV
                     WFFSLDAANWLAVRAARLLYHLPYMDARMRVSRTGDRIHYRSERPTGERFEADYQPIG
                     PIELARPGTLQHWLTERYCLYARSGSGRLYRAEVHHEPWPLQPARVYIARSDLLQVHG
                     ISVDGPPPQVLFARRLEVAIWTPDRLPRR"
     gene            7132..7569
                     /locus_tag="VGA78_00155"
     CDS             7132..7569
                     /locus_tag="VGA78_00155"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9892294.1"
                     /translation="MNKVRRPARQPVRPAVMFELLHAARQLEEQLESALATADLSMAK
                     YRVLAQLAAYGKPMSLGQLAARHKCVRSNMTQLVDRLESDGLVRRVGDPEDRRSVRAE
                     LTPLGRTRQVAGAGAVERVQVEFSAALPARDRLALERALAALR"
     gene            7874..8266
                     /locus_tag="VGA78_00160"
     CDS             7874..8266
                     /locus_tag="VGA78_00160"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX9892295.1"
                     /translation="MANPYDELGRRERQIMDVLFRQGRATAAEVLAALADPPSYSSVR
                     SMLRLLEEKGYAEHEWDGPRHVYRPTASPAQLQRSAARHMLRTFFDNSMESAVSAMLG
                     AAERPPTADELERLSQLIERARRKGGRS"
     gene            8263..10464
                     /locus_tag="VGA78_00165"
     CDS             8263..10464
                     /locus_tag="VGA78_00165"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX9892296.1"
                     /translation="MILVKVTLLLAGAFLLSWLLRRRTAALRHLNWTLALAGTLGLTA
                     LSPLVPELRVSLPASTELFPSPDDPGPAPERAGLHELQSGPDRAAVMRPGTEASSQTR
                     ESPSAIRRIPLEMILPLVYLLGFLAVLSWYLIGRMSLRRLVQRASPLGGDWSGLLSQV
                     AREMGVTGNPRLFASPRVGSPITWGLRDSVVVLPSDAVDWPLDRRRIVLAHELTHAAR
                     GDHLARLIGVVACAAYWFHPLVWAAFRRQGIESERAADDHVLIQGTSGMEYATHLLDI
                     ARRSSHLRTSGLIAIGMARLSHLEGRLLALLDESRNRAAPTPRVTRAAWGGLMLATLP
                     IAALQPAAPAPGAEPVEIERLTAQPRADTLIERTVPARAGETLALDLETGGDVTLRGW
                     NRPELQVRARLAGADWKNTRVSIARVDGGVRVRAEPTEDRNNFSTSHDFEIMLPDRYD
                     VRLESAGGSLTIIGVEGTFRGGSGGGEIRIERAKGDARLTTGGGDIQVTDSDLRGSVS
                     TGGGMVRLSRVRGGLRGFSGSGPVIYSDAGHRQTGDLDKVTISKDRIQVAEGERTGLL
                     HIQKAGGDIILDGAPDGVRANTGGGRIRIGRSAGLVDARTGGGDITIGPVAGSVNAGT
                     GAGDVHITIVRVDGQEQSLEVTAGVGRVVIEWPAGVAARFELETAYTRRFGRRTRIDS
                     DWDLVHQETEDWDDTQGTPRRYVRAEGKVGSGGGLVRVRTVNGDITIRRTP"
     gene            complement(10461..10955)
                     /locus_tag="VGA78_00170"
     CDS             complement(10461..10955)
                     /locus_tag="VGA78_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892297.1"
                     /translation="MPTSTMVVQLKKGRDDRPTLICVRRDGSRTWRKLHPFFPVHDMT
                     HYAVESVFGFTEAFFGLVASGWSLETFAERGSASRLPTEALWAENMVGLFDLERASGR
                     LMRADEFTEALNAVLAQQGVPAFRPVSDDELAAVRALRSGLQTRWFELAPAATMDLDF
                     PGAV"
     gene            complement(11274..11540)
                     /locus_tag="VGA78_00175"
     CDS             complement(11274..11540)
                     /locus_tag="VGA78_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892298.1"
                     /translation="MANSLFDPATLTVPAGTSVTWQNDDGLVHTTTSNPANPVGCPSW
                     GHNVSGGDTSPGVDFATGGISCQYFCSIHATATTGAMRGTVTVQ"
     gene            complement(11726..12019)
                     /locus_tag="VGA78_00180"
     CDS             complement(11726..12019)
                     /locus_tag="VGA78_00180"
                     /inference="COORDINATES: protein motif:HMM:NF022815.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HEX9892299.1"
                     /translation="MATRKPEWRWSQRVIARSNALDLDQGVFTRDDPRSIARSLKRSA
                     ERSRRRKSDPYRCAMSMLTFYINRAGKTLSRTRRTRLERAKSELRALFGKPRR"
     gene            complement(12089..12517)
                     /locus_tag="VGA78_00185"
     CDS             complement(12089..12517)
                     /locus_tag="VGA78_00185"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX9892300.1"
                     /translation="MIDRKADARWEGDLKAGKGSIRLGSGAFEGAYSFGTRFEGAPGT
                     NPEELLGAAHAGCFTMALSLGLTKAGHPPTSIQTTATVHLDKVGEGFSITGIDLTTQG
                     RVPGISGEEFQRLAEDAKKNCIVSRALSGVPMRLEAKLSA"
     gene            12955..13539
                     /locus_tag="VGA78_00190"
                     /pseudo
     CDS             12955..13539
                     /locus_tag="VGA78_00190"
                     /inference="COORDINATES: protein motif:HMM:NF023866.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="von Willebrand factor type A domain-containing
                     protein"
     gene            13640..14089
                     /locus_tag="VGA78_00195"
     CDS             13640..14089
                     /locus_tag="VGA78_00195"
                     /inference="COORDINATES: protein motif:HMM:NF023459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbK domain-containing protein"
                     /protein_id="HEX9892301.1"
                     /translation="MGNLKDAKLEQLADKGNGNYAYVDDLLEARKVFVQELGATLFTV
                     AKDVKLQIEFNPAKVAAYRLVGYENRLREGRASPALRWAAAVAGIGRLLRDSEFKGQS
                     TWGSMIALARDARGADREGYRSEFIRVAEAAELLARQARQPVGPAER"
     gene            complement(14190..14771)
                     /locus_tag="VGA78_00200"
     CDS             complement(14190..14771)
                     /locus_tag="VGA78_00200"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9892302.1"
                     /translation="MDRYFLRSSRVGFRPWSKSDLPLALALWGDPAVTRWIGGPWNEP
                     QVRERLDQEIRSMHARGIQYWPIFLLTTGEHLGCCGLRPYPGDDLTLELGVHLRRDFW
                     GAGLALESARTVIQHGFETLGARALFAGHNPGNESSRRLVARLGFRYLRDEYYPPTGL
                     DHPSYLLTADDYRRSEPDDRAATAPAATNRAGG"
     gene            complement(14784..15002)
                     /locus_tag="VGA78_00205"
     CDS             complement(14784..15002)
                     /locus_tag="VGA78_00205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892303.1"
                     /translation="MTTRLDKTLKRELDIEGKPYTIAISPEGVKITPKGGRKGQEVSW
                     RDIMTGSPELLRDLTGSIQSGGGAQDEE"
     gene            complement(15244..15738)
                     /gene="msrB"
                     /locus_tag="VGA78_00210"
     CDS             complement(15244..15738)
                     /gene="msrB"
                     /locus_tag="VGA78_00210"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX9892304.1"
                     /translation="MKVSVFNREGRLVGPVESPRVVKSDAEWQAQLTPDQFRIARGKG
                     TERPFCGTLLDNKRHGVYTCICCGLPLFQSDAKFNSGTGWPSFFQPVAPENVTTIEDR
                     GYGMRRVEILCARCDAHLGHVFEDGPAPTGLRFCVNSDSLGFTDREGVAALADPAAEA
                     AVRS"
     gene            complement(15944..16420)
                     /locus_tag="VGA78_00215"
     CDS             complement(15944..16420)
                     /locus_tag="VGA78_00215"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX9892305.1"
                     /translation="MARVVSAGLLLYRRGASGLEVFLAHPGGPFWIRRDAGAWTIPKG
                     MVEPGENELTTARREFEEETGISPQGPFLPLGWIRQKAGKTIHAWAWEGDADPAGIRS
                     NSAQTEWPRGSGRWLTFPEVDRCGWFDLPAAREKMNPAQAELLDRLLAVVENPVEH"
     gene            complement(16423..16911)
                     /locus_tag="VGA78_00220"
     CDS             complement(16423..16911)
                     /locus_tag="VGA78_00220"
                     /inference="COORDINATES: protein motif:HMM:NF024609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4019 domain-containing protein"
                     /protein_id="HEX9892306.1"
                     /translation="MAAFALLYITRRSGIISFTPARAFFLGLVLAGLSPGDLVAQSQV
                     EADTAAAHRAALAWLALVDSGAYAASLDSAAPLLRQMIASTDRWEQFLGMARAPFPNR
                     IQRELLEAEIDPSLPVTHPGRYIRLTFRIRGLKEQTTESVVLQAQSNGWRVAMYGVRG
                     GS"
     gene            16910..17239
                     /locus_tag="VGA78_00225"
     CDS             16910..17239
                     /locus_tag="VGA78_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892307.1"
                     /translation="MTRTIPAQTPLRRVFRRSNGPFTIVAAILGFGVGAFALGILLGR
                     RRRTGAPDVTPGTGPGARGPVTQSTVTVNPADTHMGEPGFNEEQRLDEGIQESFPGSD
                     PVSVHIE"
     gene            complement(17249..17596)
                     /locus_tag="VGA78_00230"
     CDS             complement(17249..17596)
                     /locus_tag="VGA78_00230"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892308.1"
                     /translation="MARYVTALRSANPDSIAAFFSPTAMLLEPGIAPLITRDSIRAFL
                     ASFGEIRVDSAAATPDTIEILNGSAFLWGSYFERAAFPGQPVSEQHGRFVTWWVRQPD
                     GRWLMQRLMRVPI"
     gene            complement(17742..18116)
                     /locus_tag="VGA78_00235"
     CDS             complement(17742..18116)
                     /locus_tag="VGA78_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892309.1"
                     /translation="MSTARPGAAGTTRTCPHCRATILESAAVCPACRHHLRFDPRMAQ
                     RPAPSFSPLRVDGTIRHPPSGESWEYSVMVSIRNERGEEIARHVVGVGALQPSEQRTF
                     TLAVEVFTPGGTKVPGNGVPGR"
     gene            complement(18113..18541)
                     /locus_tag="VGA78_00240"
     CDS             complement(18113..18541)
                     /locus_tag="VGA78_00240"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEX9892310.1"
                     /translation="MRPDLSPSYDLPRRTVEREVNESLIAADLTIEGKIEGSGHVRIA
                     GRFKGDVHVQGNLTIEVGAKLTGGVRASTVIIGGELEGNIDAASRVELLESGVLNGDL
                     KAGSLTVAAGSRMRGNAEFGWEEKALPHKAPVKVESGSAA"
     gene            complement(18749..19660)
                     /locus_tag="VGA78_00245"
     CDS             complement(18749..19660)
                     /locus_tag="VGA78_00245"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9892311.1"
                     /translation="MFRFSSAGHSPLAFSLARAVSVFVGAGCAQYSETAREQEPRSEQ
                     FAGPAGLLQVDDSGTGGMPVVFVHSFAGNTAHWAAQLAHLRKDRRAVALDLRGHGQSA
                     APATPDYAIESLAADIGAVVDSLDLERFVLVGHSLGGAAAIAYAGAHPDRVAGLLLVG
                     TPGKIPEDQARRIMTSIESDYDKVTQEYWNRLLTDAQTEVRAQVSSEMGSLPKDAAIS
                     IIKATFAYDPLPALGRYPGPKLVIATPSGDTPNDLHHLLPGLPHHIMTGTSHWPHLDK
                     PQEFNQLMDRFLTGIPSGGNPTPRQGS"
     gene            complement(19826..20359)
                     /locus_tag="VGA78_00250"
     CDS             complement(19826..20359)
                     /locus_tag="VGA78_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9892312.1"
                     /translation="MTAESGYSILVVTGASGAGKTTLVQALADRRLPGVHCYFFDSIG
                     VPSVERMIAEFGSPEAWQTAMTGDWVRRLAANPDRARLAVLDGQVRPSAVRAAFLEHR
                     VARGEILLLDCSHEVRDARLRQQRQHPELASRNMTAWAAYLRGQADALGLPILDTTHL
                     NIAEASDRLVQHIQGVE"
     gene            complement(20703..21371)
                     /locus_tag="VGA78_00255"
     CDS             complement(20703..21371)
                     /locus_tag="VGA78_00255"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEX9892313.1"
                     /translation="MQHWLRERHEAVPHGDPSHEMMAGMDHARLMPGMLTAEQLAQLD
                     GAKGSEFDRLFLTFMIQHPREIAYFDRGPMDSTKLVSAGSWSVYWYNGYLVSSEISRG
                     LDILELTPSGFISQNEIDAARIVRFEYLNAQEQPKLVWPASFALARAYLDQLARSNGL
                     GSDRLSAVRNELSRSEQLSGQPKRDALTRLANQLHQDATGAGDQAKVHILAAAVGELA
                     NAGR"
     gene            complement(21313..21699)
                     /locus_tag="VGA78_00260"
     CDS             complement(21313..21699)
                     /locus_tag="VGA78_00260"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEX9892314.1"
                     /translation="MKRWFRRMTSAALLGGVAIAACRSATTTPGPRGVEPDPGAKAVR
                     TPAAQAKADSGRPPYTAADVHFMSGMIRHHAQAVLMAGWAPTHGASQALRALCERIVV
                     GQRDDCPDAALASGTTRGRAPRRPVP"
     gene            complement(21816..22352)
                     /locus_tag="VGA78_00265"
     CDS             complement(21816..22352)
                     /locus_tag="VGA78_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892315.1"
                     /translation="MRHAPVFGLVLVLAGEPSEAQAPDGSANRAAIERLNFMVGRWRG
                     EAWMLRGAGERVQTTMTEIVEPKLEGTVLQVEGLGVIPSEGGGAPRPVHHALAVVSFD
                     PRAGGYVMRSYIATGQSGDFALTLIDGGVSWTREVPGGRIRNTARFADGLWHEIGEFS
                     RDGTSWTQTMEMRLRRER"
     gene            complement(22379..22765)
                     /locus_tag="VGA78_00270"
     CDS             complement(22379..22765)
                     /locus_tag="VGA78_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892316.1"
                     /translation="MVLPALLILLLVAFGLLYGQLRQRPDRRSLWRGALRIGLGVGVA
                     RAVLASLGWYVVEHDGGPLQIPGFALAMAAWPEAVILSERRVTPVPPAFYGSLSLLLI
                     ASTMILVGLVAVVVEFTRTNSRQPRS"
     gene            complement(22780..23607)
                     /locus_tag="VGA78_00275"
     CDS             complement(22780..23607)
                     /locus_tag="VGA78_00275"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9892317.1"
                     /translation="MTYSPAAIAAYFDTLGAGEWERFERTLGDRVSLAMHTGLIEQYV
                     HSGDRALEIGAGPGRFTEILHQSGCRVVVADLSTVQLKLNREAAQARGFAASVDSWHQ
                     LDICDLRVFDAEAFEVVVALGGPFSYVFEHRDKALAECVRVLRPGGYLLLSVMSLWGT
                     LHRHRAALRDMPREAIRTIIATGDLTAQTDPTSRHYCHLFRAAELREFLAGPGLALEW
                     LSASSALSTGVELEFVTEPLQWEALLEYERAACREPGYLDAGTHLLAAVRRDALVLP"
     gene            complement(23626..24102)
                     /locus_tag="VGA78_00280"
     CDS             complement(23626..24102)
                     /locus_tag="VGA78_00280"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9892318.1"
                     /translation="MSIDPLTTIGHVHLKVADLERALGFWHGVLGFDITLRMGSQAAF
                     LSAGGYHHHIGLNTWESRGGEPPPPGTTGLYHVAIRYASREVLADALRRVQGASIPLQ
                     GASDHGVSEALYLTDPDGNGVELYWDRPEAEWPRTADGALMMYTRPLDLEGLIRRQ"
     gene            complement(24163..24636)
                     /locus_tag="VGA78_00285"
     CDS             complement(24163..24636)
                     /locus_tag="VGA78_00285"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9892319.1"
                     /translation="MISAVPPLMLKTAANPGGVPIEVFDSLPAGSIADRSQLYQDLAA
                     GPFFGANRPGSRVSQGMQDAFWLQGMQTGHKNAYDCIKAFSETDFTEDLRKFDVPTLI
                     LHGDDDQVVPIGTAALASAKLVRNSTLKVYPGAPHGLTDTHKDQLNADLLTFLKG"
     gene            complement(24633..24869)
                     /locus_tag="VGA78_00290"
     CDS             complement(24633..24869)
                     /locus_tag="VGA78_00290"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9892320.1"
                     /translation="MVFLAVRGYRCIAHDRRGHGRSTQSWNGNEMDTYADDLATLIET
                     LDLRDLALIGFSTGGGEVGAISAVTAPGVWPKPG"
     gene            complement(25625..26038)
                     /locus_tag="VGA78_00295"
     CDS             complement(25625..26038)
                     /locus_tag="VGA78_00295"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HEX9892321.1"
                     /translation="MTLQRREFLALAGAVAVAPLSLPWAGPTMTTPGGAMYGLIGKMT
                     ATAGQRDALAAILLQGTQAMPGCLSYIIATDPSDSDGLWITEVWDSQANHQASLQLPG
                     VQAAIAKGRPMIAGFSNRVETVPIGGYGLPSAPAR"
     gene            complement(26088..26582)
                     /locus_tag="VGA78_00300"
     CDS             complement(26088..26582)
                     /locus_tag="VGA78_00300"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892322.1"
                     /translation="MRSWFPLYAGVASLVLSLACAPAPTALSEAHAAAIRDSVTQAQT
                     RFRELSARAHWDSLGAFYSTAPGFRFAESGAVQYRSATEVRRALSRMPAGTRIETSYR
                     DSEIDAVAPGVAVLTTLFETSFVDTTGARFSFGGAVTLLWVHESAGWRIRAGHSSAPV
                     PRPG"
     gene            complement(26688..26840)
                     /locus_tag="VGA78_00305"
     CDS             complement(26688..26840)
                     /locus_tag="VGA78_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892323.1"
                     /translation="MRSLSPEGFDVERIFEELQRARDTLPIPVTVIARGMPLEAGEMP
                     PDWSPA"
     gene            complement(27435..27704)
                     /locus_tag="VGA78_00310"
     CDS             complement(27435..27704)
                     /locus_tag="VGA78_00310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892324.1"
                     /translation="MTAYIERLLARAASRHPQARPDAIVQTLRAELGRIEKARDRTYE
                     TARQAARASAAHAFNYDIALTRLTVYLCGGIRNGLRTRSYSRWWM"
     gene            28425..29096
                     /locus_tag="VGA78_00315"
     CDS             28425..29096
                     /locus_tag="VGA78_00315"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9892325.1"
                     /translation="MPVFRVLITAAVRLYREGLAQYLGQANCFDVVRTAADVGETLTA
                     VRELRPDVVLLDMTTPGSHAAIPDITAQSPATRVVALGVGDSDGDVLACAEAGISGYV
                     SRDGSLDDLVTAIECTARGELPCTPRVAGTLLRRVAALAADAAPTPPVTALTVREREI
                     ARLVEDGLSNKQIAGRLGIEVATVKNHVHNLLEKLQVHRRGEAVARLRRRDGLRPAPT
                     GAVSA"
     gene            29416..29730
                     /locus_tag="VGA78_00320"
     CDS             29416..29730
                     /locus_tag="VGA78_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892326.1"
                     /translation="MLGQIVRAALEQDPELELLPASSSPLTPVTDQPGVDLLILVMPG
                     RHAVSECRELLSRFPDLRLLAVLEDGRGDASLYELHPRETRLGALSPPEVAQRIREAF
                     QN"
     gene            29758..31770
                     /locus_tag="VGA78_00325"
     CDS             29758..31770
                     /locus_tag="VGA78_00325"
                     /inference="COORDINATES: protein motif:HMM:NF037565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
                     /protein_id="HEX9892327.1"
                     /translation="MPVAPTYPGVYIEEVPSGVRTITGVATSIAAFIDRFQRGPVDEA
                     VRVLSMADFEREFGGLDAASEASYAIQQFFVNGGSEAVVVRVGARPPGTAPVAASLVL
                     LGGAAQVFRVRAGQRIRGLPVDNPGRWGNGLRVEVDYDTVTLPNAGIDPDNLLTPGEL
                     FNLTVSEVELRNGRMTVLRSETYRNLTMRAGARTNALDVVNAGSRLIQLDRTGLLPAA
                     VPTPPFRPDPTGTVGIAPPGGVPASGSNFSITVDPDGIGAAAAVAIPAATLVHTGVTS
                     FSDLRPSLEAAIREAANAPAATDAIRPLLAGATVKLVGGAYRVLLGLAGANFDPRATV
                     TFGGATATSLGLSGAGVFVGPQMLGPTIAGTDGGAMTSATDFLGTQLAKTGMYALEDV
                     DLFNILCIPAAADQGAVVMRAIYSEAETYCESKRAFLIVDIRDTVDDPDAMQTWLTDN
                     ATLRHRNAAVYFPRVQVPDPLNQGRLRSRAASGTLAGLYAQTDVARGVWKAPAGTDVR
                     LRNVQDLDYILTDRENGVLNPLGANCLRSFPIFGPIAWGARTLDGADQIASEWKYVPV
                     RRFALFLEESLYRGTKWVVFEPNDEPLWAQIRLNIGAFMQSLFRQGAFQGMTPREAYF
                     VRCDRETTTQTDINLGIVNILVGFAPLKPAEFVIIRIQQMAGQIPT"
     gene            31786..32304
                     /locus_tag="VGA78_00330"
     CDS             31786..32304
                     /locus_tag="VGA78_00330"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEX9892328.1"
                     /translation="MAQFSVNPQRFDPYKNFKFRVKWDGRYVAGVSKVGGLKRTTEVV
                     KHREGGDPSSSRKSPGKTEFEAVTLERGVTHDTEFEQWASKVWNFGAGLGAETSLRDF
                     RKDITIEVYNEAGQLALAYKLYRCWVAEYQALPDLDASANAVAIQSIKLENEGWERDI
                     EVAEPAERSLTA"
     gene            32308..33045
                     /locus_tag="VGA78_00335"
     CDS             32308..33045
                     /locus_tag="VGA78_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892329.1"
                     /translation="MAPLCASDVLRIWETGASLDPARRALAILAAASPGALPDALRAL
                     PVGRRDLRLLEIREETFGSRLNAVLSCPRCAERVEFDLKTSDLLARADPGIEATESEL
                     RIDDWSLRYRMPTAGDLAEVAGSRERDHAVALLVERCVIEAKRGGEPVAREEIPPQVL
                     SLMNGGMARQDPLADVVLDFVCPACGEAGQTLFDIGGYLWEELRAQAVRLLHEVHTLA
                     RAYGWREPDILALNAARRQAYLELATS"
     gene            33042..33722
                     /locus_tag="VGA78_00340"
     CDS             33042..33722
                     /locus_tag="VGA78_00340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892330.1"
                     /translation="MTDFLSHLVERSMASSPIPLPAVAPLFAPGPAITPSPWFGEVEA
                     AEPSPQPLGLTAAATQPDAAGWSFGAAVPARASEPPDRPEPFGAVPSRPRPVDREPAA
                     AQAATDLGGGRARGVEPGAVRVAPATRISSGEGDPQETRRAAHLAVPAIPVLHPFQKA
                     RPRLAEARARDSRQADPQPPIVRISIGRIEVRAITPPSPGPPKSAPMPKRSGIVLEEY
                     LRTQGRER"
     gene            33719..>33978
                     /locus_tag="VGA78_00345"
     CDS             33719..>33978
                     /locus_tag="VGA78_00345"
                     /inference="COORDINATES: protein motif:HMM:NF025431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pvc16 family protein"
                     /protein_id="HEX9892331.1"
                     /translation="MSNFLAIATVTAALKRLLQAAASQAVAGALVRTGRPEASATGAV
                     VAAGIDLYLFQVTSNAALANDDLPTRRGDASLIQRPKLALDL"
BASE COUNT         5814 a        11369 c        11227 g         5568 t
ORIGIN      
        1 atcgcccatc cgctggcgta acgccggggt gaccgcaatg gatggcgcct cctccaccag
       61 cttctggtgt cggcgctgga tggagcactc acgttcgccc agatgcacgg tccgcccctg
      121 gtcggccagg acctggatct ccacgtgacg gggccgcagg atgtacttct cgaggtacac
      181 cgaggcgtcc ccgaaggcct tgagcgcctc cgatccggcc gactgcaggg cgccggctaa
      241 ctggtcttcc cgttccacca ggcgcatgcc acgcccgcca ccgccggcca ccgccttcac
      301 cagcaccgga tagcccagct ggctcgccag cgccctggca agaccggcat cggtgagggc
      361 cccagtacca cccggcacca ccggcacgcc ggccgcgacc atccgccgcc gggcctcggt
      421 cttgtccccc atggcccgga tggccgaggc gggcgggccg acaaaaacca gtccggcctg
      481 ctccaccagc tcggcgaatt ccgcccgttc cgccagaaag ccgtagccgg gatggatcgc
      541 ctgagcgtcc gcgtcccggg cggcatccac cagccggtcc atcctcaggt agctctcggg
      601 tgcggccgca ggaccgattc gcatggcccg gtcggcagcc cgcacgaagg ggctggagcg
      661 atcggcgtcg ctgtagaccg ccaccgcctc caagccttct tcgtgacagg cccggatgat
      721 gcgcagcgcg atctcgccgc gattggcgac cagaacccgg gtgatcgaca tgctacaggg
      781 gaatgttgcc gtgcttcttg ggcgggttcc ggtctcgttt ggttcggagc atccggagcc
      841 cgtcgatcag gcgaggccgg gtatcccgcg gatcgatgac gtcatcgaca tagccgcgtt
      901 ccgccgccgc ataggggtgg gcgaaggccc gggtgtactc gtcgatcagc gtctgggtct
      961 ccgctgcgga atcctgggct tgcgcgatcc ggtcgcgata gaggatttcc accgcgccct
     1021 tgggtcccat caccgcgatc tccgcggtgg gccacgccag attgagatcg ccccggatgt
     1081 gcttcgagct catgacgtcg taggcccccc cgtaggcctt gcgggtaatg acggtgagct
     1141 tgggaaccgt cgcctcgcaa taggcgtaga gcagcttggc gccgtggcgg atgatcccgc
     1201 cgtgctcctg gcccaccccg ggcagaaagc cggggacatc cacgaacgtg accagcggga
     1261 tgttgaaggc gtcgcagaac cggatgaagc gagccgcctt gaccgaggcg ttgatgtcca
     1321 gcaccccggc cagcaccgcc ggctgattgg cgatcacccc taccgactgg ccgcccaacc
     1381 gcgcgaagcc ggtcagaatg ttcccggcga agccggcgtg cacttcgacg aagcggccgt
     1441 ggtccaccac ttgcgccacc acgcggtgca tgtcgtatgg ttgggccgga tgggcgggca
     1501 ccacatccag caggccgttg tcgcgccggt ccggcggatc atcggtgggg tggagcggcg
     1561 gatcctccag gttgttcggc ggaaggaaat ccagcaggtc ccgcaccgcg gaaaggcact
     1621 ccggctccga atcgaacacg gcgtgggcga tgcccgaggt ctcgccgtgc acatccgccc
     1681 cacccagctg gtcgaaggtc acctcttcgt gggtgaccgt cttcaccacg ttgggcccgg
     1741 tcacgaacat gtacgacacg ccccgcacca tgaacacgaa gtcggtgatg gcgggactgt
     1801 agaccgcgcc gccggcgcag ggacccagga tgacggagat ctgcggcact acgccggatg
     1861 cgagggtgtt gcgcaggaag atatcggcat agcctcccag cgaggcgacg ccttcctgga
     1921 tccgggcacc gcccgaatcg ttgagaccga tcaccggcgc gccgttgcgc accgccaggt
     1981 ccatcacctt gcagatcttc tgggcgtggg tctccgaaag cgacccgccg aagaccgtga
     2041 aatcctgtga gaacacgtac accagccggc cgccgacccg gccgtagccg gtgacgaccc
     2101 cgtcccccgg gaacttgagc tcctcaagac cgaacccggt ggctcggtgg gtgacgaacc
     2161 ggtccagctc gacaagactg cccggatcga gcagcagatc gagccgctcg cgcgcggtca
     2221 gtttgccctt cttgtgttgc tgggtgatgc ggtcggcgcc gccgccctgc tcggcctgtg
     2281 actggcgctg atggaggtcc tggagcagct cgcggggatc gggcatggcc ggggaatata
     2341 tctcctgctc cgccggaccg gaccgcgccc tgccctaccc aggcggtgag caggggtatg
     2401 ccctcccggg gtgtgcggac cttgccgctg cgggacgtcc gggacaaggc gggcaccgtc
     2461 ggcctgcccg agacccaacc gtcatgcacc aacaggcagc acccagggag gttcgcatgc
     2521 gaaaggctgg actgtcgttg atcctgggcg cgctcgcggc agcctgcgag cccgcttcat
     2581 ccgatgacat gctgatgacc gacgtgaggt tcagcagtgc caggaccccg accggcgcgg
     2641 cgagcttcgt cgccccggcg tcgggcggcg aggaggttcc ggcgcgcgac acgaggggtc
     2701 acgggaccgc tgtcttccac ctcaactcgg acggcactga attggagtat cggttgatcg
     2761 cgtccaacat cgagaacgtg gtccaggccc acattcatct cgaagcgccg ggcgtgaacg
     2821 gcccgatcgt ggtgttcctc tatggcctgg tggccccggg tggcggccgg accgacggaa
     2881 tcctggccga ggggaccatc accgtggccg atctgaccgg tccgctcacc ggggaaccgt
     2941 tctcggccct gctcgacgcc atccgagccg gaaacgctta cgtgaacatc cacaccaacg
     3001 acgggatcga tcccccgaac accggcccgg gcgacttccc cggtggagaa gtccggggcc
     3061 agatcaaagg cggacacgtc gatcactaac ttaccaagta ctgagtactg gtattcagga
     3121 tgagtccagt gccgtggcgg cggagcgtca agcactcgag accgggaata cagccatggg
     3181 ctgccctcag cgccgagccc gggtgggtgg tgagcaccgc aatcacggtc attcccgcgg
     3241 cgcgcgcggc ggcgaccccg gcgggagagt cctccaccac caggcagtcg gctggagaca
     3301 gctcgagccg ggaggccgcg agaaggtagg gctccggggc aggcttgccc tgccgcacat
     3361 cctcgccggt cacgaacaca tccgggagcg gcaggcctga ggtccgcagc cgaagcgacg
     3421 ccacggcccg gctcccggaa gtgaccacgg cccagtagcg ccggggcaag gccgacagta
     3481 gcgatgcggc gcccggggtg ggacccagtc cctcgatctc gatcgcttcc atggcgtcca
     3541 gcgcggccac ctcggcctgg atgtccagct ccggtgcgac cgatcggagg gtctcggaag
     3601 ttcggcgccc gtgtgcttgc cggatgaacc gctcggcatc gagctggcgc gcggccgccc
     3661 atttccgcca gatacgatcg atgcagggcc tcgaatcgac tagtacgccg tccaggtcga
     3721 acagcactgc cccgcaatga aagcccgaca gggtgccacc cggttcgggg ctcagtcgaa
     3781 ctccactcgg gccctgttct gctccggtcc catccgtccc gccacgatgt ccgccttgaa
     3841 gtagttctcc cctcgcaccg gccggccggc ccggcggcgc aagagcgcca gctggcccac
     3901 atgagtgagc gcgtcggcga tggggccctg aaacaattgc tcgggactcg agcccagcgg
     3961 ctgttcggaa gcaagatacc catcgacttc agccagggtc cggtggaagc gctgcacctc
     4021 ggaatcccag gatccgggta ccgagtcgtt ccacacgtgc cggccttcac agagctggcg
     4081 catccagtcg agcaggtcgt tgatgtgggc caggattcgg agcggaggcc gggtcccttc
     4141 tcccggctga tacgagggga agctgtcccc cacctcccgc agcaccttgc ctccccggta
     4201 cgccagggtt gcgagcgtgt ggcgcagcag cgcccggacc gggtcgggag gagcgctcac
     4261 aggtatcggg cgacggccat caaagcggtg gtgaccatca ggagcagggc gatgacccgg
     4321 gccgcgagca cgccgcggcg ccgcagtccc tgcagcacga ccatctgagc cgcccggtcg
     4381 gggccctcgg acatcttcat cacggatgcc gccagagcca tcgctttgag attcgccggt
     4441 cgcatgaccg tgaggcccgc gatgagagcg agtacggccg cgagcccccc cacgcctaac
     4501 gccatcccga cccgcgacct ggcccaggcg ggatcgccgt tcgccatccg gaagtagagc
     4561 cagaaaccgc tgccgatggt gatcagggcg acgaggggga gcacctcgag gattcggcgc
     4621 cgttgcagtg ccgccatcac cttgcctccg tcgggccccg catcggccac ggccggcatc
     4681 aggaagaagg tgctgaacat cacggcgccg gcccagaaca cgccgaaccc gacatgcagc
     4741 aggcggaggg tgagaacgag cggatccaca gtcgctccga ggggtagagg cggccggtct
     4801 ggctagcgac gacggtgagc ggtctgcagc agtcttaagg ctgggcaccg aggcgctgga
     4861 gggtccggag atgggagcgg accgccccga tgaaggtgga gtgggagtga tagggcaaac
     4921 catgctcagc ggccagccgc cggacgatcg ggctgatcgc gggataatgg atgctgcaga
     4981 tccgggggaa gaggtggtgc tcgacctggt agttgagccc acccacgtac cagcgcagca
     5041 gccggctctc gggaccgaag ttcgccgtcg tttccatctc gtggacgccc cagttgtcgg
     5101 gcatggctcc ggcctgatcc ggctcgggat gggccgtctc ctcgatgacg tgcgccagtt
     5161 ggaagacgat gccgagggcg aagccggcga ccaggtgcgc ggccagcatc ccgagcagga
     5221 tctgccacca ggggaggtcg atcaccagca gcggaatcac caccgaccag ccgtaataga
     5281 ccaccttgcc ggccaccagt tccgccacat ctccgggcgc atggcgccgg tcggcgtacg
     5341 gacccagatc ccgcttcagc aggtatttgt aatctttcac aaacacccag aacaacgtcg
     5401 tcatggcgta gaggaccagg gcgtagaggt gctggtagcg gtggtaccag cggcgctcag
     5461 cgtgaggcga cagccgcagc aaaggggaga ccgcaaggtc ctcgtcggtc ccgtggatat
     5521 tcgtatatgt gtggtgaatg atgttgtggg tgattttcca aaggtaaccg ctgccgccga
     5581 tcaggtccat cgtgaaaccg agcgcccggt tcaccagggg cttgtcggaa tacgcgccat
     5641 gcagcgcgtc gtgcgccacc gagaacccga tgccggccat gcccaacccc accagcaggg
     5701 caaaaaccag cattgcggcg ggagtgaatt gtccactgag gatgagaccg tagggaacga
     5761 aggtcagggc gagcatcgtg acggtcttgg ccaccatggt ggcgttcgcc ttggtcgaca
     5821 gcccccgctc cctgaaatac ccgtcgacct cgacgcgaac ctcccgaagg aatcgggcgc
     5881 cgtcccggac cggaaaggtc ggaacgatag gagcagccac ccggggcacg gtcagggtca
     5941 tgacggcctc acagtccttg ggctcgaacc cactccagta gcccctggtc cacttcggtc
     6001 actggctgtc ccagcagata gggcatgacc ggatggcgct ttcccgaact catcaaatac
     6061 cacatgggcg cgaccgcagc ttctccgcgg ggaaggttcg ccggcttacc ttcatacgaa
     6121 acgaagtgga attcgcggcc gtggtgaatc aggcggcgct gttccacctt gtgcgtgctc
     6181 atggtttctc gcagtgctgg cccaatgacc accgaaccga gctgtgacat atccggtgcc
     6241 ggatgtggaa gacctgcccc ggaaatctaa cccaacctcg cgttttctca caggttaccg
     6301 gcgcgggagc cggtcaggcg tccagatggc cacctccagc ctccgggcaa acagcacctg
     6361 aggtggaggc ccgtcgacgg agatgccgtg cacctggagc aggtcggacc gcgcgatgta
     6421 cacccgggcc ggctgcagcg gccagggctc atgatggacc tcggcccggt agagccgccc
     6481 ggagcctgag cgggcgtaga ggcagtaccg ctccgtcaac caatgctgca gcgtgcccgg
     6541 gcgggccagc tcgatcggcc cgatcggttg atagtcggcc tcgaagcgct cgccggtagg
     6601 ccgttccgat cgatagtgga ttcgatcgcc ggtccggctc acccgcatgc gggcgtccat
     6661 gtatggcagg tgatagagga gtcgcgccgc ccgcaccgcg agccaattgg cggcatccag
     6721 actgaagaac cagacccccg gccgatcctg cagcgtcacg taggtccgta cgttgagctc
     6781 ggggaaggtg gagaggcccg gcagcgcggg aactccccgc agcgtcacgc cggacatcca
     6841 gaatgggatg accccgaccc acgcactgct ctgatactcc tgcaccacca gtggctccgg
     6901 caccaggtgc cggagcaccg tcaccggcac cggccaatgg aggaacgcca ggtcgtgcca
     6961 gatctggcgg ccgctccagg gtcgcggggg caccggccag ggccggtggg cggtatggtc
     7021 gagcgagggg tgcgtcacgt tccgggttcc ggtctgaagg tccggtcccg gccccgattg
     7081 cgaaaccccc gacggcttgc cgtcggcctc cgctcgggat actgttcatg cgtgaacaaa
     7141 gtccgtcgcc ccgcccgtca gccggtccgg ccggccgtga tgttcgagct gctccatgcc
     7201 gctcgacagc tggaggagca gctggagtcg gccctggcca ccgccgatct ctcgatggcg
     7261 aaataccggg tcctggctca gctggcggca tacggcaaac cgatgtcgct cggccaactc
     7321 gccgcccgcc acaagtgcgt gcgatccaac atgacccagc tggtcgaccg gctggagagc
     7381 gacggtctgg tgcgccgggt gggcgatccg gaggaccggc ggagtgtccg ggccgagttg
     7441 acgccgctgg gacgcacccg ccaggtggcc ggggcgggcg cggtggaacg ggttcaggtg
     7501 gagttctcgg ccgcgctacc ggcccgggat cgtctggccc tggagcgcgc cctggccgcg
     7561 ctccgttagt gttgttttgg caatatagtt caggtatgta ttattctcat acgtaccagg
     7621 tctatgtgag ccagtggcgc acatcctcca tacaggaaag gatcacccct atggtcgggg
     7681 gaactccgcg gcgggtgcca attcatgggc ggcgcgctgc tgatcggata cttcggcggc
     7741 cggccccttc agtctggatg cgcgccgggg agtcgcggct tgacgccccg ccgagttagt
     7801 gctagtgtat cagcattgtg ctagtacatc agcatagtgc gggtacacca gcaccagccg
     7861 ggcgagggtc ctgatggcga atccgtacga tgagctgggc cgccgcgagc ggcagatcat
     7921 ggatgtgctg tttcgccagg ggcgcgctac cgccgccgaa gtgctggccg cgctggccga
     7981 cccccccagt tattcctcgg tccgcagcat gctccggctg ctggaggaga agggttacgc
     8041 ggagcatgag tgggacgggc cccgccacgt ctaccgcccc accgccagcc cggcgcaact
     8101 gcaacgttcc gcggcgcgtc atatgctcag gacgttcttc gacaactcca tggaatcggc
     8161 ggtctcggcc atgctgggcg ccgccgagcg gccgcccacg gcggacgagt tggaacgtct
     8221 gtcccagctg atcgaacggg ccaggcgaaa agggggccgc tcatgattct ggtgaaagtc
     8281 accttgctgc tcgccggggc cttcctcctc agctggctgc tccgccgccg caccgcggcg
     8341 cttcgtcatt tgaattggac cctggcgttg gccggcaccc tcggcctcac ggcattgtcg
     8401 cccctggtgc cggagcttcg ggtttcgcta ccagcttcga cggagctgtt cccgagtccc
     8461 gacgatccgg gcccggcccc tgagcgcgcc gggctccatg aactccagtc tggccccgac
     8521 cgggcagccg tcatgcgccc cgggacggag gcatcctccc aaaccaggga aagcccctcc
     8581 gccattcgcc ggatcccgct ggagatgatc ctgcctctgg tttatctgct cgggtttctc
     8641 gcggtcctga gctggtacct catcggacgg atgtcgctcc ggcgactggt gcagcgggcc
     8701 tccccgctcg gcggcgattg gagcgggttg ctgagccagg ttgcccgcga gatgggcgta
     8761 accgggaacc cacgattgtt tgcctcaccg cgagtcggct cgccgatcac gtggggactc
     8821 cgggattccg ttgtggttct gccgtccgac gcggttgact ggccgctcga ccggcgacgg
     8881 atcgtgctgg cgcacgagct gacccatgcc gcccgggggg accatctggc ccggttgatc
     8941 ggggtggtgg cctgtgcggc ctactggttt catcccctgg tatgggccgc gtttcgccgc
     9001 caggggatcg aaagcgaacg cgccgctgat gatcacgtgc tcattcaggg gacctccggc
     9061 atggaatacg cgacccatct cctcgatatc gcgaggcgat cgagccatct gcgaacgagt
     9121 ggcctgatcg ccatcggtat ggcccgcctt tcgcacctgg agggacggct cctggcactg
     9181 ctcgacgaaa gccgcaaccg cgccgcgccg acgccccgcg tgacccgagc cgcctggggc
     9241 ggcctgatgt tggccacgct cccgattgcc gcgctgcagc cggcggcgcc tgcaccgggc
     9301 gctgagccgg ttgagatcga acgcctaacc gctcagcccc gcgcggatac gttgatcgag
     9361 cggacggtcc cggcccgggc cggcgaaaca ctggcgctcg atctcgagac cggcggcgat
     9421 gtcaccctgc gagggtggaa tcggcccgaa ctgcaggtcc gggcccgtct ggcgggggca
     9481 gactggaaga acacgcgggt cagtatcgcg cgggtcgatg gcggcgtgag ggtccgggcc
     9541 gagccgaccg aggaccggaa taacttttcc acgtcccatg acttcgagat catgctgccg
     9601 gatcgctatg acgtccggct cgagtccgcc gggggcagcc tgaccatcat cggcgtggag
     9661 ggcacgttcc ggggaggctc tggtggtggt gagatccgga tcgagcgggc caaaggtgac
     9721 gctcgcctga ccaccggagg cggagacatc caggtcaccg actccgatct gaggggctcg
     9781 gtgagcaccg gcggcggcat ggtccgactc tcgcgagttc ggggggggct gcgcgggttc
     9841 tcgggaagcg gtccggtcat ctactccgac gcgggccacc ggcagaccgg cgatctggat
     9901 aaggtcacga tttccaagga ccggattcag gtcgcggaag gcgagaggac cgggcttctc
     9961 cacatccaaa aagccggggg cgacatcatc ctcgacggcg cgccggacgg cgtgcgagcg
    10021 aacaccggtg gcggtcgaat ccggattggc cgttcagccg gactggttga cgcccgcacc
    10081 ggaggtggag acatcaccat cggtccggtg gccggatcgg tcaacgccgg caccggcgcg
    10141 ggcgacgttc atatcacgat cgtgcgtgtc gatgggcagg aacagtccct ggaagtaact
    10201 gccggggtgg gacgggttgt gatcgaatgg cccgccggag tcgccgcccg cttcgaactc
    10261 gagaccgcct acacccgccg gttcggccgg cgcacccgca tcgacagcga ctgggacctg
    10321 gtgcaccagg aaaccgagga ttgggacgat acccaaggca cgccccggcg ctacgttcgg
    10381 gccgagggaa aggtcggcag cggcggaggc ctggtccggg tccgaaccgt caacggcgac
    10441 atcaccatcc gccggacgcc ttagacggcc ccgggaaagt caaggtccat cgtcgcggcg
    10501 ggagccagct cgaaccaccg ggtctgcagc cccgagcgca gggcccgcac cgcggccagc
    10561 tcatcatcgc tcaccggacg aaatgccggg acgccttgct gtgccagaac ggcattcaag
    10621 gcctcggtaa actcgtcggc tcgcatcagc cggcccgagg cgcgctccag atcgaacagg
    10681 cccaccatgt tctcggccca gagcgcctcg gtggggagcc gggaggctga accgcgctcg
    10741 gcgaaggtct ccagactcca gcccgacgcc accagtccga aaaacgcttc ggtgaacccg
    10801 aagacactct caacggcgta gtgggtcatg tcgtgcaccg gaaaaaacgg atgcagtttg
    10861 cgccaggttc gcgagccgtc ccgccggacg caaatcaggg tggggcggtc gtcccggccc
    10921 ttcttgagct gcaccaccat agtcgacgtt ggcatctgca gataacgccc taactaattc
    10981 atccccagat tacgcggatg acgccgaacc aggcttattg ccagacctca gcagaccgtc
    11041 agttggagtt caagcgcgtt gggaacaatc ggcgtcatcg gcggcatctg cggataccgc
    11101 actgactaat tcatccgcgg attacaccga tgaccaagtt taatgcccga cctcggcacc
    11161 cgtcaggcgg agtccgagcg cgttgggaac gatcggcgtg gagttcaagc atatcgtgaa
    11221 cgattggtgc catcgttcca cgaatcctgg gtaaaagata gcgccccgcc gattcattgg
    11281 accgtgaccg tgccccgcat ggctccggtg gtcgcggtcg cgtggatgct gcagaagtac
    11341 tgacagctga tcccgccagt cgcgaagtcc acgccagggc tggtgtcccc gccactcacg
    11401 ttgtgacccc aactggggca gccgaccgga ttggcgggat tggatgtggt cgtgtggacc
    11461 agcccgtcgt cattttgcca ggtcacgctg gtcccggctg ggacggtcag cgtggcgggg
    11521 tcgaacagac tgttcgccat gcacactttg gtcgcactgg gatcgcaatc gcccgctggg
    11581 ccggttccat cgtcatcacc gcacgcggat agaagccaaa ccgccatgac tgccgaaatg
    11641 atccatccca taacgtctcc tcgtcggcta cgggtgcgag gttcccagcg caaaccgacc
    11701 cccgcttcgc ggcgggatgc gggactcatc ggcgaggttt tccgaagagg gcgcgcaatt
    11761 cgctcttggc acgttccagg cgggtccgcc gggttcggct gagggtcttg ccggcccggt
    11821 tgatgtagaa ggtcagcatc gacatggcgc agcggtaggg atcggacttg cggcgccggc
    11881 ttcgttcagc cgagcgcttg agggagcggg cgatgctgcg gggatcgtcc cgcgtgaaaa
    11941 ctccctggtc cagatccagc gcgttgctcc gcgcgataac ccgctgcgac cagcgccact
    12001 cgggcttccg ggtggccatc ggtccgctcc gctgccgtca tgagcggaac gttttgggga
    12061 agcccggtct acacatcaca tcatcggctc aggcggagag tttcgcctcg agccgcatag
    12121 gcaccccgga cagggctcgt gagacgatgc agttcttctt ggcatcctcg gccaagcgct
    12181 gaaactcctc gcccgagatc ccgggcaccc tgccctgcgt ggtcagatcg atcccggtga
    12241 tcgagaagcc ctcgcccacc ttgtccaggt gcaccgtagc cgtggtttga atgctggttg
    12301 gaggatgacc ggccttggtc agccctaacg acagcgccat ggtaaagcag ccggcgtgag
    12361 cggcacccag caactcttcc gggttggtgc cgggcgcccc ttcgaaccgg gtgccgaagg
    12421 agtaggcgcc ttcgaacgct ccgctgccca gccggatcga gcccttcccc gccttgaggt
    12481 cgccctccca ccgggcatcc gcctttcgat cgatcatacg aaatccctcc ggtccttgcc
    12541 gagacgcaca ggttcgttgt gtgaagccgg ttgcaacctg cccctgcccg agcggccgcc
    12601 gcaagggctc gccgcactcg tgcatgtccg gcccctcgcg gcatctcctg tcgaactgtc
    12661 ttcggcaacc gctgcgaggg aggccccatg cgccgctcat accatcttgt gctcgcgagc
    12721 tccctgatcg ggctcgtcct gccggtttcg tcggatcgga cttccggctt cctcgcgacc
    12781 ggccgggtcg ttctgacggc catggcgctg ggctatcggc ccgtaaccga tacagtgcag
    12841 gtggtacccg attcagtgac ccgtgccgat ttcgtcctca tcccttcccc ctaccggctc
    12901 catgaattgg tcacggacgc aagcgctgcg tcgccggcca gcgcatcggc cgccatggcc
    12961 ttgcgttccg cggtggggac gagcggcaag gacgcacggc ggttcaacac cgaggagtac
    13021 aagcacatcg tcgagaatgg gtggcagtcg ccggcgcgtt atccgctgtc gaccttttcg
    13081 accgacgtcg acgccggctc atacagcaac atccggcgtt tcgtgaccgg cggggcgctt
    13141 ccaccccggg acgcggtgcg ggtggaagaa atgatcaact acttctccta cgactatccc
    13201 gagccccggg gagagcaccc ggtgtccgtg accagcgagg tgtccatcgc gccgtggcac
    13261 gacacccaca agctgatact catcgggctc cagacccgcc ggctggcgat ggaggacctg
    13321 ccccccaaca acctggtgtt cctgctggat gtctcggggt cgatggcgac tccgcagaaa
    13381 ctccccctgg tcaagtcggc gttccgcctg ctggtgaacc agctccggcc ggaggatcag
    13441 gttgccatcg cggtctatgc cggggcggcc ggcctggtcc tcccatctgc atcgggttcc
    13501 cggaaggacc tcattctcga tgcgatcgac cgactcgatg ccggcggatc caccgcgggg
    13561 gcggcgggga tccgtctggc gtacgaaacg gcccggaagg cgtttctggc cgaaggcaat
    13621 aaccgtcctg ggcttcggca tgggcaacct gaaggacgcg aagctggaac agctggccga
    13681 caagggcaac gggaactacg cctatgtgga cgatctgctc gaagcccgca aggtgttcgt
    13741 gcaggagctc ggcgccacct tgttcacggt ggcgaaggac gtgaagctgc agatcgagtt
    13801 caacccggcc aaagtcgccg cctaccggtt ggtcggctat gaaaaccggc tgcgcgaagg
    13861 tcgtgcctcg ccagcgctgc ggtgggccgc agcggtggca ggcatcggca ggctgctgcg
    13921 ggattcggag ttcaaagggc aaagcacctg ggggtccatg attgccctcg cccgggatgc
    13981 tcggggtgcc gaccgggaag ggtatcgcag cgagttcatc cgcgtggccg aagcagccga
    14041 actgctggcc cggcaggccc ggcaaccggt cggtccagcc gagcggtagc tcgaatggac
    14101 catgttactc gtggcgtgag ggctggagag ctgtgcacac cttcgccgat ggcgtcatct
    14161 cccctcggga gagtgccaca cgtccaactt caccctccgg cgcgattcgt tgccgccggg
    14221 gcggtcgccg cgcgatcatc cggctcgctc ctccgatagt cgtcggccgt gagcagatag
    14281 gacgggtggt cgaggccggt gggcgggtag tactcgtcgc gcaggtagcg gaatccgagc
    14341 cgggccacga gccggcgaga cgattcgttg cccgggttgt gaccggcgaa gagggctcgc
    14401 gcgcccaggg tctcgaagcc gtgctggatg acggtgcggg ccgattcaag tgccagcccg
    14461 gcgccccaga agtcacgccg caggtgaacg ccgagctcga gggtgaggtc atcgccggga
    14521 tagggccgca ggccgcaaca gccgaggtgc tcgccagtgg tcagcaggaa aatgggccag
    14581 tattggatcc cgcgtgcgtg catcgaccga atctcctggt ccagtcgctc ccgtacctgc
    14641 ggctcgttcc acggcccgcc gatccagcgc gtcacggcgg gatcacccca gagggccaga
    14701 gccaagggca ggtcggactt ggaccacggg cgaaaaccca cccgggaaga acgcagaaag
    14761 taccggtcca tgggatcagc gggtcactcc tcgtcctgag cgcctccgcc cgactggatt
    14821 gaaccagtca gatcgcgcag cagctcgggg ctgccggtca tgatatcccg ccagctgacc
    14881 tcctgaccct tgcggccacc cttgggtgtg atctttacgc cctccgggct gatggcgatg
    14941 gtgtagggct ttccttcgat gtcgagctcg cgtttgaggg tcttgtccag tcgagtggtc
    15001 attggttttt ctgccctggc tgaaggttga tctttcccga gcgatgctaa gcagttccag
    15061 ctcccgaggc tgtctcccaa gggggacgcc ggaaccgaat cgtagccacc tcggcctggg
    15121 accatgtagt ccggggccgc aaccgggcgt aattacctgc ggagcgggcc tgaacgcgac
    15181 catggaaggg gccatcaagt cgggctggcg cgcggcgcgc gagctgctgg gtcgataggc
    15241 tgttcaggat cgcacggctg cttcagcagc cggatccgcc agcgccgcga cgccctcccg
    15301 gtcggtgaag cccaaggaat cggaattcac gcaaaaacgg agaccggtcg gagctgggcc
    15361 atcttcgaac acgtgcccca ggtgtgcgtc acatcgagcg cagagaatct ccacccgccg
    15421 catgccgtag ccccggtcct cgatcgtcgt cacgttctcg ggagcgaccg gttgaaagaa
    15481 actgggccac ccggtcccgg aattgaactt ggcgtcggat tggaacagcg gcagaccgca
    15541 gcagatgcag gtatagacgc cgtggcgttt gttgtcgagc agagtcccgc agaaggggcg
    15601 ctcggtcccc ttcccccgcg cgatccgaaa ctggtccggc gtgagctgag cctgccactc
    15661 ggcgtcgctc ttcaccaccc gaggactctc taccggccca accagccggc cctcacgatt
    15721 gaacacgctg accttcatga ccgtcctcgg atcgatgtgg cgtgggcgct ccggggaggc
    15781 tcagcccggc caatcaggtt gcgggcgggt gcttcgcccg ggttcggacg gctccggtca
    15841 gaatgccaaa ccccaaccgg atcacgctgg caatgatgat atacgtctga aagacaccgg
    15901 caaccgacag ggcccaggcg acgccacggg gtcgatgctc gcatcagtgt tcgaccggat
    15961 tctccactac ggccagcagc cggtcgagca gttccgcctg agccgggttc atcttttccc
    16021 gcgccgccgg gagatcgaac catccgcatc ggtcgacctc gggaaaagtg agccatcgtc
    16081 ctgagccgcg gggccattcg gtctgcgccg agttgctccg gatacccgcg ggatcggcat
    16141 caccttccca ggcccaggca tggatggtct tgccggcttt ctgtcggatc cagccgagcg
    16201 gcagaaaggg gccttggggc gaaatcccgg tttcttcctc gaactcccgg cgcgccgtgg
    16261 tcaactcgtt ctcacccggt tcgaccatcc ctttggggat ggtccaggct ccggcgtcgc
    16321 gccggatcca gaagggtcct cccgggtggg ccaggaagac ctcgagaccg ctggccccac
    16381 ggcgatatag caagagcccg gcgctgacga cccgtgccac tctcaggaac cgcctcggac
    16441 gccgtacatg gcgacgcgcc agccgttgga ctgcgcctgc agtaccaccg actcggttgt
    16501 ctgctccttc aatccgcgga tccggaaggt gaggcggata taccgtcccg ggtgagtcac
    16561 cggcaacgac ggatcaattt cggcctccag cagctcccgc tggatccggt tgggaaacgg
    16621 tgcgcgagcc atcccgagaa actgctccca ccggtcggtc gacgcgatca tctgtcggag
    16681 cagcggggcg gcactatcga gactggccgc gtaggcaccg ctgtcgacca gcgctaacca
    16741 ggccagggcc gcgcgatgag ctgccgcggt atcggcctcg acctggctct gagccaccag
    16801 gtcgcctgga gacagccccg cgaggaccag gcccagaaaa aacgccctgg ccggtgtgaa
    16861 ggagatgatc ccggagcgtc tggtgatata taggagggcg aatgccgcca tgaccagaac
    16921 catacctgcc cagacgcccc tcaggcgagt ctttcgccgc tccaacggac cgttcacgat
    16981 tgtggcggcg attctcggat tcggggtcgg tgcctttgcg ctcggcatcc tcctcggccg
    17041 ccggcgccgt accggagcgc cggacgtcac tccggggact ggaccgggcg cgcgcggtcc
    17101 ggtgacccag tcaaccgtga cggtaaaccc ggccgatacc cacatgggcg agccgggatt
    17161 caacgaggag cagcggttgg atgaggggat tcaggaatcg tttccgggaa gcgacccggt
    17221 ctcggtgcac atcgagtaac aggtccgatc atatcggcac ccgcatgagc cgttgcatca
    17281 accagcggcc atccggttgc cgtacccacc aagtgacaaa ccggccgtgc tgctcgctga
    17341 ccggctgacc ggggaaggcc gcacgttcga agtacgagcc ccaaagaaag gccgacccgt
    17401 tcaggatctc gatggtatcc ggcgtcgctg cggccgaatc cacccggatc tcgccgaagg
    17461 aggccaggaa agcccggatg gagtcccgcg tgatcagcgg agcaatcccc ggctccagca
    17521 acatcgctgt gggagaaaag aaggccgcga tcgaatccgg gttcgcggaa cgcaaggcgg
    17581 ttacatagcg tgccatctcc gacaccactg cgttgcgtga tctcgaggcg gtgctctcca
    17641 cctcccgccg cgaaaccgtg cacgagagaa ggcagaacag gaataggacg ccggtctcaa
    17701 acgtcgaccc cttcagagcc cctccgatgg ggtcgccccg atcaacgccc gggaacgccg
    17761 ttcccgggga ccttggttcc ccccggggtg aagacctcca ccgccagcgt gaaggttcgc
    17821 tgctcggagg gctgcagcgc cccgaccccg acgacgtggc gggcgatctc ttcgccccgt
    17881 tcgttgcgaa tcgacaccat cacggagtat tcccaggact cacccgacgg gggatggcga
    17941 atcgtcccgt cgacccggag cggcgagaaa ctcggcgccg gccgctgtgc catccggggg
    18001 tcaaatcgca ggtgatgccg gcaggccgga caaacggcgg cgctttccag gatcgtcgcc
    18061 cgacaatggg gacaggtgcg ggtcgttccc gcggctcccg gacgggctgt gctcatgccg
    18121 cggagccgct ctccactttg accggggcct tgtgcggcag ggccttctcc tcccagccga
    18181 actccgcgtt gccccgcatc cgcgaccccg cggcgacggt caacgaaccg gctttgaggt
    18241 ccccgttcaa cacgccgctt tcgagaagct ccacccggga ggcggcatcg atgttcccct
    18301 ccagctcacc accgatgatg accgtgctgg cccgaacccc gccggtcagc ttggcaccga
    18361 cctcgatggt gagattgccc tgaacatgca cgtcgccctt gaagcggccg gcgatccgga
    18421 catgacccga cccttcgatc ttcccttcga tggtcaggtc ggccgcgatc agggattcgt
    18481 tgacctcacg ttcgaccgtc cgtcggggca gatcatagct gggggacaaa tcagggcgca
    18541 tatcgacttc cttcttgggt gcgggatcag gggttatcgt ggctgggacc ggagccggtt
    18601 ctttcctgac gggtgtctgt tccttccaga ttgccatggt gcttcctgtc gtgaggcagg
    18661 ggattagcac aaaaggacta gcacggatct cgtcgccgag ccgtgccaat cccctgacgt
    18721 tgatcgggat acccgaagat agcgcgattc agcttccctg tcgcggggtc gggttgccgc
    18781 ccgagggaat tccggtgagg aaccggtcca tcagctggtt gaattcctgg ggcttgtcca
    18841 agtggggcca gtggctggtc cccgtcatga tgtggtgggg aaggcccgga agcaggtgat
    18901 ggaggtcatt gggcgtgtca ccggacggcg tggcgatgac caacttgggg ccggggtagc
    18961 gacccagcgc cggcaacgga tcatacgcga aggtcgcttt gatgatgctg atcgcggcat
    19021 ccttcggcag gctccccatc tcgctcgaaa cctgggcccg cacctcggtc tgcgcgtcgg
    19081 tcagcagccg gttccagtac tcctgggtca ccttgtcata gtcggattcg atagaggtca
    19141 tgatccggcg agcctgatcc tcggggatct tccccggcgt gcccaccagc agcagtcccg
    19201 cgacgcggtc cgggtgggca ccggcgtacg cgatggcggc ggcgcctccc aggctgtgtc
    19261 cgaccagcac gaaccgctcc aggtccaacg agtcaaccac cgccccgata tcggcggcca
    19321 gagattcgat cgcgtagtcg ggggtggccg gcgccgcaga ctggccgtgg ccgcgcaggt
    19381 cgagcgccac ggcccgccgg tcttttcgca ggtgggccag ttgggccgcc caatgggcgg
    19441 tgttcccggc aaaggagtgg acaaagacca ccggcatgcc gccggtaccg ctatcatcga
    19501 cctgaagcaa gccagccgga ccggcaaact gctccgacct gggctcctgc tcgcgggccg
    19561 tttcggaata ctgggcgcac ccggcgccga cgaacaccga cacagctcga gcaagggaga
    19621 aagcgagcgg ggagtggcca gcggaggaaa agcggaacat ggtagcctcc tgacctgcct
    19681 aacaccaccc acggtcggcg taggtggtgc cgcggcagaa tgccccccct ggctcaactg
    19741 tagctcgggg ccacgctgat cggcaactgg accccttctg ccttgggcac tgggcattgg
    19801 gcatcaggca cttactcccg cctgatcact ctacgccctg aatatgctgc accagccgat
    19861 cgctggcctc ggcgatgttc aggtgtgttg tgtcgagaat cgggagcccg agggcgtcgg
    19921 cctgcccgcg gagataggcg gcccacgccg tcatgtttct ggacgccagc tcggggtgct
    19981 ggcgttgctg ccgcagccgc gcgtcccgca cctcgtgact acagtccagc agcaggattt
    20041 ccccccgggc cacccggtgc tccagaaacg ccgcccgcac ggcggaggga cgcacttgcc
    20101 cgtccagcac cgccaatcga gcccggtcgg ggttggccgc caggcggcgc acccagtcgc
    20161 cggtcatcgc ggtctgccag gcctcgggag atccaaactc cgcgatcatg cgttcgaccg
    20221 acggaacccc gatcgaatcg aagaagtagc agtgcacccc aggcagccgg cgatccgcca
    20281 gcgcctgcac caaggtcgtt ttgccggcgc cggaggcccc cgtcaccacc aggatggaat
    20341 acccactctc cgccgtcatg gcatcgatcg gccgctaggc cgcgccaggg ggcgcgacca
    20401 gctcgagcag gtcgcggccc tcctgcgccg atttcccctc ggatggatcc tggcgaggtg
    20461 ccgggatgtc gccgtgcagg gcctcaccca gatcgtgtag gtgtctttga ggcgttcggc
    20521 ggatcggagg aaggccagta ccccctccag ctcctgaggg ttcacggggg cgatgcgatc
    20581 accacggccg ctcatcggcg gttgggccgt ggatggaggg gaccgggatg tcgttcaacc
    20641 ggaggtacac cgtgagaaac acccgtgctg ggacgaggtt ggaatccgag cgcctggcgt
    20701 gatcagcgcc cggcgttggc cagctcccca accgctgcgg ccaggatatg caccttcgcc
    20761 tgatcgccgg cgccggtcgc gtcctggtgg agctggttgg ccaaccgggt caatgcgtca
    20821 cgcttcggct ggccggagag ctgttcactg cgggacagct cgttccgcac cgccgacagc
    20881 cggtcggacc cgaggccgtt ggaccgcgcc agctggtcga ggtaggcgcg cgccagggcg
    20941 aagctcgcgg gccagaccag cttgggctgt tcctgggcgt tcaagtactc gaatctcacg
    21001 attcgcgccg cgtcgatctc gttctgcgag atgaacccgc tgggcgtcag ttcgagaatg
    21061 tcgagcccac gcgagatttc cgagctcacc aggtatccgt tgtaccagta gaccgaccac
    21121 gacccggcgc tcaccagttt ggtggagtcc atcgggcccc gatcgaagta ggcaatttcc
    21181 ctcgggtgct ggatcatgaa ggtcaggaag agccggtcga actcggagcc cttggcgcca
    21241 tccagctgcg ccagctgctc ggcggtcagc atcccgggca tgagcctggc gtgatccatc
    21301 cccgccatca tctcatggga cgggtcgccg tggggcacgg cctcgtgtcg ttcccgaagc
    21361 cagtgctgca tcaggacaat cgtcgcgctg gcccaccacg atgcgttcgc acagggcgcg
    21421 cagggcctgg ctcgcgccat gggtgggcgc ccagccggcc atcagcaccg cctgcgcgtg
    21481 atgccggatc atgccggaca tgaagtggac gtccgccgcg gtgtagggtg gccgcccgct
    21541 gtcggccttt gcctgagccg ccggcgtgcg gacggccttc gcgccggggt ccggctccac
    21601 cccgcggggg ccgggggtcg tggtcgcgct cctgcaggcc gcgatggcaa cgcctcccag
    21661 gagggcggcc gacgtcattc gccgaaacca ccgtttcatc ggccctcgct cgcatccgga
    21721 ttcgtgtctc cgatagtagg cgacaggaac cgccttggaa agtcgcggcg gaagtaccgc
    21781 gcgctgggcg actcctgccg ggtgctccga gtcacctatc gctcccgccg aagccgcatc
    21841 tccatcgtct gggtccagct ggtgccgtcc cgggaaaact cgccgatctc atgccatagg
    21901 ccatcggcga aacgcgcggt gttccggatc cgcccgcccg gtacctcgcg agtccaactt
    21961 acgccgccgt cgatcagggt tagcgcgaag tcgcccgatt ggccggtcgc gatgtaggag
    22021 cgcattacgt agccgccagc ccgggggtca aacgagacca ccgccagggc gtgatgcacc
    22081 ggacggggcg cacctccacc ctccgagggg attacgccca gcccttccac ctgcagaacg
    22141 gttccctcca gctttggctc cacgatctcc gtcatcgtcg tctgcacccg ctcgccggcg
    22201 ccgcggagca tccaggcctc accccgccac cgcccgacca tgaagttcag gcgctcgatc
    22261 gcggcccggt tggcggaccc gtcgggggcc tgcgcttcac tcggttcgcc agccaggacc
    22321 agaaccagcc cgaacaccgg ggcatgtcgc attgttgtcg cccttgcgga gtgtgaacct
    22381 aggatcgggg ttgccgggag ttcgtgcggg tgaattccac cacaacggcc accagaccaa
    22441 ccagaatcat cgtgctcgcg atcagaagca atgacaacga cccgtagaag gcagggggaa
    22501 ccggggtgac gcgccgttcc gaaaggatga ctgcttcagg ccaggccgcc atggcgagcg
    22561 cgaagcccgg gatctgaagc gggccaccgt catgctcgac gacgtaccat cctaacgacg
    22621 cgaggaccgc tcgggcgacc ccaaccccca ggccgatccg gagtgcgccg cgccagagac
    22681 tccgtcggtc cggccgctgg cgcagctgcc cgtacaggag gccgaatgcc accagcaaaa
    22741 gaatcagaag cgcgggcaga accatgttgg atacgccagt taggggagaa ccagagcgtc
    22801 acgccggacc gcggccagca gatgagtccc agcatcaagg taccccggct cacgacacgc
    22861 agcccgctca tactccagca gggcctccca ctggagcggt tcagtaacga actcaagctc
    22921 gacgccggtc gacagcgcgc tcgaggccga tagccactcc aacgccaggc ctgggcccgc
    22981 cagaaactcc cggagctcgg cagcccggaa caggtggcaa tagtgccggc tggtcgggtc
    23041 ggtttgcgcg gtcaagtccc cggtggcgat gatggtgcgg atggcctcgc gtggcatatc
    23101 ccggagggcg gcgcggtggc ggtgcagcgt tccccacagc gacatgacgc tgagaagcag
    23161 gtaaccgccc ggtcggagaa cccgaacaca ttccgccagg gccttgtccc ggtgctcgaa
    23221 cacatagctg aatggtccac ccaaggcgac gacgacctcg aaggcctcgg cgtcgaatac
    23281 ccgcaggtcg caaatatcca actggtgcca ggagtccaca ctggcggcga atccccgtgc
    23341 ttgagccgct tcacgattca gcttcagttg cacggtcgat aggtccgcca ccacgacacg
    23401 acagcccgac tggtggagaa tctcggtgaa gcggcccggg cccgccccga tctcaagagc
    23461 ccggtcgccg gagtggacgt actgctcgat gagcccggtg tgcatcgcca gggagacccg
    23521 atcgccgagg gtgcgctcaa agcgctccca ttccccggct cccagcgtgt cgaagtaggc
    23581 ggcaattgcc gcggggctat aggtcacggg aagcggaccg gcgagtcatt gacgacggat
    23641 caggccctcg aggtcgagtg gtctggtata catcatcagc gctccgtcag ccgtccgagg
    23701 ccactccgcc tctggccggt cccagtacag ctcgaccccg ttcccatccg ggtccgtcag
    23761 gtataacgcc tcgctcaccc cgtgatccga cgccccctgc aatggaatac tggctccctg
    23821 tacccgccgc agcgcatccg ccagcacctc ccgcgaggca tagcggatcg cgacgtgata
    23881 gagcccggtc gttcccggtg gcggcggttc cccgccccgg ctttcccagg tattgagccc
    23941 gatgtggtga tgatacccgc cggccgagag gaacgcggcc tggctcccca tccggagcgt
    24001 gatgtcgaac cccaggacgc cgtgccagaa cccgagcgcg cgctcgaggt cggcgacctt
    24061 gaggtggacg tgcccaatgg tggtcaaggg atcgatgctc atggtccagt aacatagccc
    24121 gacccccctc gtaacccgga cctcctcgcc gggcaaccgg cctcagccct tcagaaaagt
    24181 cagcaggtca gcgttgagct ggtccttgtg cgtgtcggtg agtccgtgcg gcgcgccggg
    24241 gtagaccttg agggtcgagt tcctgaccag cttcgccgag gccagcgccg cggtgccgat
    24301 cggcacgacc tggtcgtcat cgccgtgcag gatcagggtc ggcacgtcga acttcctgag
    24361 gtcctcggtg aagtccgtct ccgagaaggc cttgatgcaa tcgtacgcgt tcttgtgtcc
    24421 ggtctgcatt ccctgcagcc agaacgcgtc ctgcatcccc tgggacactc tcgagccggg
    24481 ccggttggca ccgaagaacg ggcccgcggc cagatcctga tagagctgcg agcggtccgc
    24541 gatggagccg gccggaaggc tgtcgaagac ctcgatcgga actcccccgg gattcgccgc
    24601 cgtcttgagc atcagcggcg gaaccgcgga gatcaacccg gctttggcca gacgcccggt
    24661 gccgtgacgg ccgatatagc gcccacctca ccaccgccgg tcgagaaacc gatcagggcg
    24721 aggtctctca ggtccagcgt ttcgatgagc gtggcgaggt cgtcggcata ggtatccatc
    24781 tcgttgccgt tccacgactg ggtcgaccgg ccgtgccccc ggcggtcatg ggcgatgcag
    24841 cgataacccc ggacggccag gaacaccatc tgggactccc agctgtcggc gttgagcggc
    24901 cgccgtggct gaatacgacc ggctgtccgg tgccccagtc cttgtaatag atctcggtgc
    24961 cgtcccgcgt ggtgacggtg ctcggggcgt ggtgttcggt cgcagtggtc atggctggtt
    25021 ctcctgatgt ggtacagggg tccgctccgg tctcacccac aataagtctg ggcaccgtac
    25081 cccggcatcg gccagtggaa tactcttttc ctactccttt cggtagcggg gacgggtgaa
    25141 tcgcgcaagc aatcaagctt gatagggtgt cattcgcgga gcagccgacc catgacgtgc
    25201 cggcggagcc cgcccgaccg agctccggga agcccgctgc ccgaaacacc tcgaggaaac
    25261 ccatgaaccg gtagctgcgg gaatcgggag cgaccggata ggcctcgagg accgtcgcgc
    25321 cgcaccgctt cgcatgggtc gccgccgcgg caatgagctg ctcggtcaga ccgtgccgcc
    25381 ggagctcccg gcggacatag aagcaaacga tcgaccagac cttcgaccga tctttcctcc
    25441 gcagtagcgc gccacaccat gcaccaacag gccttgggac cgccgcgact ctcaaaaagc
    25501 gcctcgagat ccgtccagcg gtgctggtca gcctcgtgaa aggtcacccg gctcacgtcg
    25561 ccgacagctg ggaagtccgt atctggcgga gggcgcttct tggacggatt gccggaagga
    25621 ttcctcaacg cgccggagcg ctcggcagcc cgtatccgcc gatcgggacc gtttccaccc
    25681 ggttgctgaa cccggcgatc atcgggcgcc ccttggcaat ggcggcctgc actcccggca
    25741 actggagcga ggcctgatga tttgcctggc tgtcccacac ttcagtgatc cagagcccat
    25801 cggagtccga cggatcagtg gcgatgatgt agctcagaca accgggcatc gcctgggtgc
    25861 cctggagcag gatcgccgcc aatgcatcgc gctggcctgc cgtcgcagtc atcttcccga
    25921 tcagtccgta catcgcccct cccggcgtgg tcatggtcgg gcctgcccac ggaagggaga
    25981 gcggggcgac cgccaccgca ccagccaggg ccagaaactc ccgtcgttgc agagtcaccc
    26041 cgaagattag tgtggcagcc aaatggccgg caaaggccca tcgtcggtca gccaggtctc
    26101 ggcaccgggg ccgaggaatg gccggcccga atgcgccaac cggccgactc gtggacccag
    26161 agcaaggtca ctgccccgcc gaagctgaac cgggcgccgg tggtatcgac aaagctggtc
    26221 tcgaacaagg tcgtgaggac cgcgaccccc ggggccacgg cgtcgatctc cgaatcccgg
    26281 tagctggtct cgatccgggt gccggccggc atccgtgaca gcgccctgcg gacctcggtt
    26341 gcggaccggt attgcaccgc cccgctttcg gcgaagcgaa acccgggcgc cgtcgaatag
    26401 aacgcaccca gagaatccca atgggcccgg gccgacaact cccggaaccg cgtctgtgcc
    26461 tgggtgacgc tatcgcggat cgcagcggca tgcgcctccg aaagtgctgt tggagccggc
    26521 gcgcacgcca ggctgagcac gagactcgcg acaccggcgt acaggggaaa ccacgatctc
    26581 atgagcacct ccggagacgg cactgttcga tcagacgaag tctccttcgg ggaatgccgg
    26641 gcgagctccg ccggcggatg gcgccgcaga tcctctcgcg cggtctgcta ggccggggac
    26701 cagtccggag gcatctcccc ggcctcgagc ggcatgcccc gggcgatgac cgtgaccgga
    26761 ataggaagcg tgtcccgggc ccgctgcaac tcctcgaaga tccgctccac gtcgaaccct
    26821 tccgggctca gcgaccgcat tccgccccgg cggtccgctg cgcgggggtc agcagcggat
    26881 cgatctgctc gcactcccgc tcatggacag cgtccaccag gatgaggcct accacctcgg
    26941 ctgaatgagc cgccgcgtgc aaccggacga agggccctgg cagcgactgg tctggaccag
    27001 gccgtactcc cgctgaggga gcttccgccg ggcggtgact ggctccgtgc tccgatcccg
    27061 agccggccct ggatgtaccg gtcagtccgg gtcacgtggc cggatcaccc ggatgcgatc
    27121 ctgttcattc ggactactac cccgagaacc agcatacctg agggccggtg agttcgccgc
    27181 ggttcagcgg cggagctgaa ggacccgccg agtcagattc ccccaccgaa gtttgacaac
    27241 gtcctccggc acatcaccag ccatgctgag cattgtctcg ggcgccaaaa gcgaccgcac
    27301 ttgtattggg tggcggagtc gtgcttaaag gagagaaggt ccttcagtgg taccgattca
    27361 cttggaaacc gggaatcgct cgaacaccac ggaaagaaca gcatggctct ctcgcagttc
    27421 cgctgggaac cctttcacat ccaccaacgg gaatacgacc gggtacgcag tccgttcctg
    27481 attccgccac agaggtagac ggtgagccgc gttagggcga tgtcatagtt gaatgcgtgc
    27541 gccgctgagg cgcgcgccgc ctgccgcgcg gtctcatagg tacggtcccg ggccttctcg
    27601 attcggccca gctccgccct gagggtctgg actatcgcgt ccggtcgcgc ctgaggatgt
    27661 cgactggcgg cccgcgcaag aagtcgttcg atgtaagctg tcaagcgatc gacgcgagat
    27721 gctcctcgtc gaggctccac tcctcgattt cgcttcgcga tgggaaggag ctttgagcca
    27781 agggacccac gactcatcat agccgagcag gtacttcttg aggtcgtcag gctgtccgag
    27841 caggagctcc cacgagatca caccgggtcg cttcaacaga cctctctttc gacccctacc
    27901 agatccgact gatgaccgca gctgagccgt acccatgact cccgctctgc ggataggtga
    27961 aggcacggtc aggcagcttc cgtgtcgaga gctgggaccg atcggcgtgc cggcttaatg
    28021 cacggcaaac cagtaaggca tcgagacgag ttcggcgatt accgccggtg ccgcccggtg
    28081 ccttggcacc tgacgcgacg agccgtgtct tgctccccta tcaaggttga taggggatac
    28141 cctatcaacc ttgatagctt gcgcgattcg gcccctctca acattcattg gtggcatcat
    28201 ccggcgcgaa atgcccggcg aactagccga tgccaactat gccgcagggg ggccaggagg
    28261 ggcggtcggc cgccggcgtc gtggtgatgc tacaccccga tgccgacctc actacccccg
    28321 caggcggtgg caacatcatc ctggccaccc ggccagttgt ttatattgca gttggattcg
    28381 aaccctcgcc atgcatgcgt ggccagcgcc tcgaggcggt ttgagtgcct gttttccgag
    28441 ttctgatcac tgcagctgtt cgactatatc gcgaagggtt ggcccaatac ctcggtcagg
    28501 ccaactgctt tgatgtcgta cgcacagccg ccgacgtggg agagacactg accgcggtca
    28561 gagagcttcg gcccgacgtc gttctcctgg acatgaccac gccgggcagc cacgccgcaa
    28621 tccccgacat caccgcgcag tctcccgcca cacgcgttgt cgcgctgggc gtcggggatt
    28681 ccgacggtga cgtgctggct tgcgccgaag ctgggatttc gggctacgtg tcgcgtgacg
    28741 gctcgctcga cgacctcgtg accgccatcg agtgcaccgc gcggggggag ttaccctgca
    28801 cgccgcgggt tgcaggcacg ctactgcgac gcgtggcggc gctggcggct gatgccgcgc
    28861 cgaccccgcc ggtcacggca ctgaccgtcc gcgaacgcga aatcgcccgg ctggtcgaag
    28921 acggtctgtc caacaagcag attgcgggcc gactgggcat cgaggtcgcc accgtcaaga
    28981 accacgttca caacctgctg gagaagctgc aggtgcaccg ccgcggggaa gccgtggccc
    29041 ggttacgacg gcgcgacggc ctgcgaccgg cccccaccgg agcggtttca gcctagcata
    29101 cccatcctcc cgcgccgaag gtctggatcc cagcctagtg cttttctgaa tccaaaggtc
    29161 catcccatgt cttgccgagc gagccgcagg catggatgca gtgtggtttc gaggcctctc
    29221 gtcactgggt tgcctgaagc tcttcctgcc gaaggtcagg cgtctctttc cgaagatccg
    29281 gactcggttg tggattctat ttgagccggt cggtctattc ctgcccttcc tgaacgatcg
    29341 tcagatttac tccggtgacc gacgcatagc gctcccctga gaaagaaccg agctgttctg
    29401 atctccaccg gcggcgtgct gggtcagatc gtccgcgcgg cgttggaaca ggacccggag
    29461 ctggaactgc ttcccgccag ctcgtctcct ctcaccccgg tgacggacca acctggagtc
    29521 gatctcttga tcctggtgat gccgggtcgc catgcggtgt cggagtgtcg cgagctgctc
    29581 agccggtttc ccgacctccg actgctcgct gtgctggagg acgggcgagg ggacgcgagt
    29641 ctctacgaac tccacccgag agaaaccagg ctcggcgcgc tctcgccacc ggaggtggct
    29701 cagcggattc gagaagcatt ccaaaactaa gaggcagttc tcgtaaggag gaacgccgtg
    29761 ccagtcgcgc ccacctaccc tggcgtgtac atcgaagaag tgccgagcgg agtccgcacg
    29821 atcaccggag tggcgacctc gatcgccgct ttcatcgatc ggttccagcg ggggcctgtc
    29881 gatgaggccg tccgagtctt gagcatggcg gatttcgagc gcgagttcgg cgggctggac
    29941 gccgccagcg aggcgagtta cgccattcag caattcttcg tcaacggcgg cagcgaggcg
    30001 gtcgtggttc gggtcggcgc cagacccccc ggcacagccc ccgtggctgc cagcctggtg
    30061 ctgctcggcg gggcggctca ggtgtttcgg gttagagccg gccagcggat ccgagggctc
    30121 ccggtcgata accccggtcg gtggggcaac ggtctccggg tggaggtgga ctatgacacc
    30181 gtaacccttc ctaacgccgg catcgacccc gacaacctgc tcacgccggg ggagttgttc
    30241 aacctcaccg tgtcggaggt cgagctgcgg aacgggcgga tgaccgtgct gcggagcgag
    30301 acctaccgga accttaccat gcgggccgga gcgcgtacca acgcgcttga tgtggtcaac
    30361 gcgggctccc gcctgatcca actcgaccgc accggtctgc ttcccgccgc cgtgccgacc
    30421 cctcccttcc ggcccgatcc cactggcacg gtggggatag cccctccggg cggagtaccg
    30481 gcgagcggct cgaacttttc gatcacggtg gatccggacg gtatcggagc cgctgccgcg
    30541 gtcgcgatcc ctgcggcgac gctggtgcac accggggtga cgagcttcag cgacctccgg
    30601 ccgtccctcg aggccgcgat ccgcgaagcg gcaaacgcgc ccgccgcaac cgacgccatc
    30661 cggccgctcc tagccggagc gacggtgaaa ctggtgggcg gagcctatcg ggttttgctc
    30721 ggtctcgccg gcgccaattt cgacccgaga gccacggtga ccttcggcgg ggccacggcg
    30781 accagtctcg gtctctccgg cgcgggcgtc ttcgtgggcc cgcaaatgct cggtcccacc
    30841 attgcgggta ccgatggcgg cgcgatgacc agcgccaccg actttctggg cacccaactc
    30901 gccaaaaccg ggatgtacgc gctggaggat gtcgacctct tcaacatcct ctgcatcccc
    30961 gccgcggccg atcagggcgc ggtggtgatg cgggcgatct atagcgaggc cgagacctac
    31021 tgcgagagca agcgcgcgtt tctgatcgtc gacatcaggg ataccgtcga cgatcccgac
    31081 gcgatgcaga cgtggctcac tgacaacgcc accctccgcc accgcaacgc tgcggtctac
    31141 ttcccccggg tgcaggtacc ggaccctctc aaccagggcc ggctgcgcag ccgggcggcg
    31201 agcgggacgc tcgctgggct ctacgcccag accgatgtgg cccgtggcgt gtggaaggct
    31261 cccgcgggaa ccgacgtgcg gcttagaaac gtgcaggacc tcgactacat cctcaccgac
    31321 cgggagaacg gcgtcctgaa tccgctgggc gccaactgcc tccgcagctt cccgatcttc
    31381 ggccccatcg cctggggcgc ccgcaccctg gatggggcag accagatcgc ctcggaatgg
    31441 aagtacgtcc cggtccggcg ctttgccctc ttcctggagg agagcctcta ccgcggcacc
    31501 aagtgggtgg tcttcgagcc caacgacgag ccgctctggg ctcagatccg gctgaacatc
    31561 ggcgcgttca tgcagagcct cttccgccag ggtgccttcc aggggatgac gccgcgggag
    31621 gcctacttcg tgagatgcga ccgggagacc accacccaga ccgacatcaa tctgggaatc
    31681 gtgaacatcc tggtgggctt cgccccgctc aagcccgcgg agttcgtcat catccgaatc
    31741 caacagatgg ccggacagat tccgacctga tcaggaggag actcgatggc ccagttcagc
    31801 gtgaacccac agcggttcga cccctataag aacttcaagt tccgggtgaa gtgggacggc
    31861 cgctatgtcg cgggggtgag caaggtcgga ggcctcaagc gcacgaccga ggtggtgaag
    31921 caccgggagg ggggagaccc gagcagcagc cggaaatcgc cggggaagac cgagttcgag
    31981 gcggtcacgc tggagcgcgg cgtcacccac gataccgagt tcgagcagtg ggccagcaag
    32041 gtgtggaact tcggcgcggg cctgggcgcg gagacctcgc tccgggactt ccgcaaggac
    32101 atcacgatcg aggtgtacaa cgaggctggc cagctcgccc tcgcctataa gctgtaccgc
    32161 tgctgggtcg cggaatacca ggcgctcccc gacctggacg ccagcgcgaa cgcggtcgcg
    32221 atccagagca tcaagctcga gaacgaaggg tgggagcgcg acatcgaagt ggccgagccc
    32281 gcggaacgca gtctgacggc gtaggccatg gctccgctct gcgcttccga cgtcctccgg
    32341 atctgggaga ccggggcgtc gctggatccg gctcgtcgcg cgctggcgat cctggcggcg
    32401 gcttctcccg gtgcgctccc tgacgcattg cgtgcgctgc cggtgggtcg ccgcgacctg
    32461 cggctgctcg agatccggga agaaaccttc gggtcgaggc tgaacgccgt cctgtcctgc
    32521 ccccgctgcg ccgagcgcgt cgagttcgac ctgaagacgt ccgacctgct ggcgcgggcc
    32581 gatcccggca tcgaagcgac ggagtcggag ctccgcatcg atgactggag cctgcgctac
    32641 cgcatgccga cagccgggga cctggccgag gtcgccggca gcagggagcg tgaccacgcg
    32701 gtggcgctcc tggtggagcg ctgcgtcatc gaggcgaaac gaggcggcga gccggtggcg
    32761 cgggaggaga ttcccccgca ggtgctttcg ctgatgaacg gaggaatggc ccgccaggac
    32821 ccgttagccg acgtggtgct ggattttgtc tgtcctgcct gcggtgaggc cggccagact
    32881 ctgttcgaca tcggcggcta cctgtgggaa gagctacgag cccaggcggt gaggctgtta
    32941 cacgaggtcc acaccctcgc gcgcgcctac ggctggcggg agccggacat tctggcgctg
    33001 aacgccgccc ggcggcaggc gtacctcgag ctggcgacgt catgacggat ttcctgtccc
    33061 acctggtcga gcgctccatg gcgtcctcgc cgatcccgtt gccggcggtg gctccgctgt
    33121 ttgcaccggg cccggccatc acgccgagcc cgtggttcgg cgaggtggag gcggcggagc
    33181 cgagtcccca gcctttgggg ctgaccgccg ccgcgactca gccggacgcc gccgggtgga
    33241 gcttcggagc ggccgtaccg gcgcgggcca gtgagccgcc ggatcgcccg gagccgttcg
    33301 gggctgttcc gtcgcggcca cggccggtgg atcgcgagcc cgccgcggcc caggccgcga
    33361 cggatctcgg aggagggcgg gcccgcgggg tcgaacccgg cgcggttcgg gtggcgccgg
    33421 ccacccggat ctcctcaggc gagggagatc ctcaggaaac ccgcagagcg gcacacctcg
    33481 ctgtgcccgc catacccgtc ctccatccgt ttcagaaagc tcggccgcgg ctggccgagg
    33541 ctcgggctcg cgacagcagg caggcggacc cccagcctcc catcgtccgg atctcgatcg
    33601 ggcgaatcga ggtgcgggcc ataacgcctc cgtccccagg tccgcccaag tccgcgccaa
    33661 tgcccaagcg ctccggcatc gtactcgagg agtatctgag gacacagggc cgtgagcgat
    33721 gagcaacttc ctggcaatcg ccacggtgac tgcggccctc aagcggctcc tccaggcagc
    33781 ggccagccag gcggtcgccg gcgcattggt tcgaaccggc cggccggagg cttcggccac
    33841 cggtgcggtg gtggccgcgg ggatcgatct ctacctcttt caggtgacat ccaatgcggc
    33901 cctcgccaac gacgatctgc ccacgcggcg gggcgatgcc tccctgatcc agcggccgaa
    33961 actcgcgctg gacctgca
//
LOCUS       DASWKS010000007         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1851246, whole genome shotgun sequence.
ACCESSION   DASWKS010000007 DASWKS010000000
VERSION     DASWKS010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1851246"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..>1816
                     /locus_tag="VGA78_00350"
     CDS             58..>1816
                     /locus_tag="VGA78_00350"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9892332.1"
                     /translation="MRLSLSTEPPATAAIGVVLSPQPQVQVLDANGSAVTSRGVLVTA
                     SIASGGGALAGTTETRTDLNGRAVFTDLALIGPVGSRALRFSAQGLAAAISRAIDAAA
                     GPVTSAVIQAGNNQTAPAGTVVPVAPAVRVTDGSDNPIAGVPVNFTVTGGGGSIMDGS
                     QVTNAQGVATLGQWVLGTSIGPNSLSAAVTGLASPIAFSATAVIGPATEIIRLEGDGQ
                     TATIGGAVPIAPTVKVTDGFGNVISGLAVNFVPADGSGSVSGNPAITDASGVARLGSW
                     RLGLAPGFHTLNATSQGAIPASFTATGVDFPVSLIAAGVSHSCAVDANGAARCWGANA
                     QGQLGNGTSAGDSLPVFVTNGTGFTQIVAGTHSCGLGPTGVARCWGPGSNGQLGDGTN
                     ASRSIPVFVSGGFSFSQLTAGVLHTCGLRSSDGRAFCWGAGANGRLGVGGTGSRSTPT
                     EVIGGHSYSVISAGVAHTCGVRTDGVLFCWGQNTEGRLGDNTIIERQEPTPVVSAITF
                     TGVSAGGGHTCALDSSGAAWCWGVNSSGQLGDGTLTSRLVPAAVLGGRTYSLITTGTA
                     HTCALASDGTVWCWGENSSS"
BASE COUNT          257 a          620 c          633 g          306 t
ORIGIN      
        1 tccatcggct gcttcactgc ctgccagagc tcgggagata ccgtcgcccc gacgggagtg
       61 cggctcagcc tgtccactga gccgcccgcc accgcggcga tcggcgtcgt gctctctccc
      121 cagcctcagg tccaggtgct cgacgccaac gggagcgccg tgacctcgcg gggcgtgctg
      181 gtcacggcca gtatcgccag cgggggtgga gctttggccg gcaccactga aacccgaacc
      241 gacctgaatg gccgggcggt ctttaccgat ctggccctga tcggaccggt cggcagtcgc
      301 gcgcttcgct tcagcgccca ggggctggcc gcggccatct cccgcgccat cgacgccgcg
      361 gccggaccag tcacgtccgc cgtgatccag gccggaaaca atcagaccgc accggccggt
      421 acggtggtgc cggtcgcgcc cgcggtgcgg gtcacggacg ggtccgacaa tccgatcgca
      481 ggggtgccgg tgaatttcac ggtgaccggc ggcggcgggt cgatcatgga cgggtcgcag
      541 gtcaccaacg cccagggcgt ggccaccctg ggtcagtggg tcctcggcac cagcatcggc
      601 ccgaattcgc tgagtgcggc cgtgacggga cttgcctctc cgatcgcttt ctccgccacc
      661 gccgtgatcg gaccagcgac cgagatcatt cggctcgaag gcgatggaca gaccgcgaca
      721 atcggcggcg ctgtcccgat cgcgccaacc gtgaaggtta ccgacggctt cgggaacgtg
      781 atctcgggtc tggccgtgaa tttcgtcccc gccgatggca gcggcagtgt gtcgggcaat
      841 cccgccatca ccgacgccag cggggtggcc cggctgggat cctggcggct gggattggct
      901 ccgggcttcc atacgctcaa cgccacgagc cagggtgcca tcccggcgag cttcaccgcg
      961 accggggtgg actttccggt ctcgctgatc gcggccggcg tgtcgcactc ctgcgccgtc
     1021 gatgccaatg gcgcggcgcg gtgctggggt gccaacgcgc aggggcagct ggggaacggg
     1081 acctcggctg gcgactcgct cccggtgttt gtcaccaacg gtaccgggtt tacccagatc
     1141 gtcgccggca ctcactcctg cggtttgggc ccaaccggcg tggcccgctg ctggggtccc
     1201 ggttccaacg gccagttagg cgacgggacc aacgccagcc ggtccattcc cgtcttcgtg
     1261 tccggcgggt tttcgttctc gcagttgacc gcaggcgtgc tccatacctg tggtctccgg
     1321 tccagcgacg gaagggcctt ttgctggggg gccggcgcca acgggaggct gggagtgggc
     1381 ggtaccgggt cacgctctac tcccacggag gtgatcggag gtcattccta ttcggtgatc
     1441 tccgccggag tggcccatac ctgcggcgtg cgaaccgacg gtgtgttgtt ctgttggggg
     1501 cagaacactg agggccgcct gggcgacaac acaatcatcg agcgccagga accgaccccg
     1561 gtcgtgtcgg ccattacctt caccggcgtg tcggccggcg gcgggcacac ctgcgcgctc
     1621 gatagcagcg gagcggcctg gtgctggggc gtgaattcct caggccagct gggtgacggg
     1681 accttgacct cgcgcctggt gccggccgcg gtgctgggcg gtcgcaccta ctcgctcatc
     1741 accaccggaa ccgcgcacac ctgcgccctc gcctccgatg gaacggtctg gtgctggggc
     1801 gaaaactcga gcagcg
//
LOCUS       DASWKS010000008         1939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2960250, whole genome shotgun sequence.
ACCESSION   DASWKS010000008 DASWKS010000000
VERSION     DASWKS010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2960250"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="VGA78_00355"
     CDS             <1..258
                     /locus_tag="VGA78_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892333.1"
                     /translation="GRPPAGLYWQHLGLYAFQRPALERWTGLKPTSLEEAERLEQLRA
                     LQHGFSIGVALLDEPAPAGIDTPDDLRRAERHWHATQGGRP"
     gene            255..1919
                     /locus_tag="VGA78_00360"
     CDS             255..1919
                     /locus_tag="VGA78_00360"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEX9892334.1"
                     /translation="MSTSGSTTKFIFVTGGVVSSLGKGIAAASLGRLLVERGLNVTIQ
                     KFDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFIDRSLSQQNNITTGRIYQ
                     AVISKERRGEYLGSTVQVIPHITDEIKSAIRRAAPGHDVVITEIGGTVGDIESLPFLE
                     AIRQFRQEVGRENALFIHLTLVPWIAAAGELKTKPTQHSVRDLMQIGIQPDLLVCRSE
                     RPLSTDIKRKIALFCNVDYSCVIESPDVKSIYEIPLRFLEQGFDREVCARLKLETIEP
                     DLSGWRQMVDRILHPARRVKIAVVGKYTDLHDAYKSVHEALLHGGIPNDVGVDIEWIG
                     SDGFTDQEAAGNLLKNFDGLLVPGGFGDRGIEGMVQGVRWAREQGLPFFGICLGLQVA
                     IIEFARHVCGLSDTNSTEFQPDCPTPVISLLPSQRGVQDLGGTMRLGAYPARLRDRSR
                     AAQAYGSTEISERHRHRWEVNNAYRDLLAEHGLRLSGQSPDGGLVEVVELPDHPWYIG
                     CQFHPELKSRPNRPHPLFTAFIAAAVRRRYPSAPTPAGATELVAAR"
BASE COUNT          326 a          652 c          635 g          326 t
ORIGIN      
        1 ggccggccgc cggcggggtt gtattggcag catctgggcc tctatgcctt ccagcgcccc
       61 gcgctggagc gctggaccgg cctcaagccg acgtccctgg aggaagccga gcggttggag
      121 cagctccggg cgttgcagca cgggttcagc atcggtgtgg ccctgctcga tgagccggcg
      181 cccgccggga tcgatacgcc ggacgacctg cgccgcgccg agcggcactg gcacgccact
      241 cagggaggga gaccatgagc accagcggct ccaccaccaa gttcatcttc gtcaccggcg
      301 gcgtggtgtc ctccctcggg aagggcatcg ccgccgcgtc gctgggacgg ctgctggtgg
      361 agcgcggtct caacgtcacc atccagaaat tcgatcccta catcaacgtc gatccgggaa
      421 ctatgtcgcc gttccagcac ggcgaagtct atgtcaccga tgacggggcc gagaccgatc
      481 tcgacctggg tcactacgag cgtttcatcg accggtcgtt gtcccagcag aacaacatca
      541 ccaccggccg gatctatcag gccgtcatca gcaaagagcg ccgcggcgag tacctcgggt
      601 cgacggtgca ggtcattccc catatcaccg acgagatcaa atcggccatc cggcgggcgg
      661 ctccgggcca cgatgtggtg atcaccgaga tcggcggcac ggtcggcgac atcgagtcac
      721 tgccgtttct cgaggccatt cggcagttcc ggcaggaagt cgggcgggag aacgcgctct
      781 tcatccacct gacgctggta ccgtggatcg ccgcggcggg ggagctcaag accaaaccga
      841 cccagcactc ggtccgcgac ctgatgcaga tcgggatcca gcccgacctg ctggtctgcc
      901 gcagcgagcg gccgctctcg accgacatca agcgcaagat cgcgctcttc tgcaacgtgg
      961 actactcctg cgtgatcgag agtcccgacg tcaagtcgat ctacgagatc ccgctccgct
     1021 tcctggaaca gggcttcgat cgcgaggtct gcgcccggct caagctcgag actatagagc
     1081 ccgacctcag cggttggcgc cagatggtcg atcggatcct gcacccggcc cgccgggtga
     1141 agatcgccgt ggtggggaag tacaccgacc tgcacgatgc ctacaagtcg gttcatgagg
     1201 cgctgctgca cggcggaatc cccaacgacg tcggggtcga catcgagtgg attggaagtg
     1261 atggattcac cgatcaggag gcggccggca acctgctcaa gaatttcgac gggttgctgg
     1321 tcccgggtgg gttcggcgat cgcggcatcg agggcatggt gcagggcgtc cggtgggccc
     1381 gggagcaggg gcttccgttc ttcgggatct gcctcggtct ccaggtggcg atcatcgagt
     1441 tcgcccggca cgtctgtggg ctgtccgaca ccaacagcac cgagttccaa cccgattgtc
     1501 ccactccggt catctcgctg ctcccctcgc agcggggggt ccaggatctg gggggcacca
     1561 tgcggctggg cgcctatccc gcgcggctca gggatcgctc ccgcgcggcc caggcgtacg
     1621 gcagcaccga gatcagcgaa cggcaccgcc accgctggga agtgaacaac gcctatcgcg
     1681 atctcctggc cgagcacggc ctccggctgt cgggccaatc gcccgatggc ggattggtgg
     1741 aagtggtcga gctgccggat cacccctggt acatcggctg ccagttccat cccgagctca
     1801 agtcccggcc caaccggccc catccgttgt tcacggcctt catcgccgcc gccgtccggc
     1861 ggcgttaccc atcggctccg acaccggccg gtgcgacgga gctggtcgcc gcacggtgag
     1921 tggctggtcg ttcggctca
//
LOCUS       DASWKS010000009        11410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3329322, whole genome shotgun sequence.
ACCESSION   DASWKS010000009 DASWKS010000000
VERSION     DASWKS010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11410
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3329322"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..555)
                     /locus_tag="VGA78_00365"
     CDS             complement(88..555)
                     /locus_tag="VGA78_00365"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX9892335.1"
                     /translation="MRSRAIFLLIIGAGASAPVQAQDAQVQLWEAAISGDTTALRGAL
                     TAGAKVDSLDTRRSANGRRALNWAALNNQVPAIRLLLAAGAKIDTANRTGFTALHHAA
                     EAGSLEAATELLKAGANPKLTNLAGVTPAQVARERGFASVAALLEAAEQGKRP"
     gene            738..1427
                     /locus_tag="VGA78_00370"
     CDS             738..1427
                     /locus_tag="VGA78_00370"
                     /inference="COORDINATES: protein motif:HMM:NF025702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4397 domain-containing protein"
                     /protein_id="HEX9892336.1"
                     /translation="MSRKPCQSLAAGALLTGLLMACSDDPTAPAGPTAELRLLHATSN
                     LGALDVEVASSTVIQGITFGNASAITPVPAGLQHLTIRSGGTVVGQIDANLTTEHINA
                     VTVVAGVPQLSSTVVPDTGQAAPNRANLRLVNVVGSNTADPTLLHVLINFPGVNPDST
                     ARIGLDTKVASYGALMYFDPGSFRLRYVPQGQSTVLAETTFNIAAGEKKAVVLERDAA
                     GTYRIQVLVEQ"
     gene            complement(1440..2843)
                     /locus_tag="VGA78_00375"
     CDS             complement(1440..2843)
                     /locus_tag="VGA78_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892337.1"
                     /translation="MAPERLWLGGMFLSLLGSTCVPAQPHQDSSLPGEWIRTEAELSP
                     DQAARQCVSLSWNKPRETLSDSIVSRACRVRRFESLGRIGSVIWQVAIVEHVSVFGAD
                     SQTRVEDLKLFPDTVREEEIVIFTSGRAKGTIRAIWHDRHDSRYEHPGLPRIAAGSGA
                     HFLELVTCVDGTGGCRWDVFRLKASVPWQLVQQAYAPQIRALLPEGWGLWKGVRPFTD
                     SLIAHGWVYLPGDGNCCPLFTARARLTLQNDTLRLERLDLVPDTTYPSSHRTILPGAR
                     VGAIGPETTEDQLVRWFGPEAVARRPVHLGEGICSPGTLVLEGKELEAEVAWADSART
                     RVAFVRIGRHPSAWRTTRGVTIGTTLAELQRLQGSPVAFSGFGWDYGGSGSWTEPLPL
                     VLDSTGKGSIGIRLAPDSASDERLDQLGSDPRVRELYGNRQVMSDHLLLRGLTIEVRQ
                     LVQPWAEAAIQLDCDKL"
     gene            complement(2889..3449)
                     /locus_tag="VGA78_00380"
     CDS             complement(2889..3449)
                     /locus_tag="VGA78_00380"
                     /inference="COORDINATES: protein motif:HMM:NF024769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEX9892338.1"
                     /translation="MAAEYITLDVRNSQRWRSWLRKHHGASPGVWLLFHKDHTGVKSV
                     PYEEAVRQALCFGWIDSLIKRLDEDRYARKFTPRQPTSKWSDVNRKRWAELKEKGLLA
                     APGLAAAPTDRSYAPRPSIPDLPAYIAKALKANPKAWRTFQALAPTYRRHFVAWIHTA
                     KRPVTRENRVRESIALLAAGKKLGLK"
     gene            complement(3635..4297)
                     /locus_tag="VGA78_00385"
     CDS             complement(3635..4297)
                     /locus_tag="VGA78_00385"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HEX9892339.1"
                     /translation="MIRADLPWKWVLLAGAVGFGSSRIYSSLLHWPRPWFVLAYSVTV
                     SILLALYASRERVSLLLQTRRHARTGVVFGLLIGALLLFQVFSQPASSGPTGLGLLAD
                     LAWYGVVYGTADAVLLSVIPVLTLYGSQPPEVLRSPGGRTRWAGVAVAASALVTALYH
                     LGFDEFRGPQVIQPVVGNLIITLGYLLCGSPLAAVVAHVLMHGGAVLHGMETTVQLPP
                     HY"
     gene            4419..5000
                     /locus_tag="VGA78_00390"
     CDS             4419..5000
                     /locus_tag="VGA78_00390"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9892340.1"
                     /translation="MGKTVGKGILVLAAVVSSLALQSSPRDDQYRLPFPAGDSARLIQ
                     GNNGPYGHTGHARYAFDFIMSIGSPVTASRKGQVEATEERFQDGNHTPGQENFVIIRH
                     ADSTFARYYHLTHNGALVDVGQAVQPGDTVGRSGNTGASAGPHLHFDVTSGCFAWGCQ
                     TRAIRFRNAGADSLIPGRTYRAGNDRCRRRIIP"
     gene            complement(5351..7912)
                     /locus_tag="VGA78_00395"
     CDS             complement(5351..7912)
                     /locus_tag="VGA78_00395"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9892341.1"
                     /translation="MLRYHRVLTCLGAGLAVSSAATAQSRPPKDPDSVTVVADSSFRR
                     GGLGQWLLGSTYRELWSTPIRVEVLDPDAFAGGLTPLARGGGLQTRSLHFQGANGREY
                     TFRLVRKDPGDVVGEELDGTFVGDLVRDQMSAIHPGGALIAPPIMKAAGVLHAPPLLR
                     YLPDHPRLGEFRQEFGNQLGTIEERPIADQEKNLLGFAGATRVEGTEDLIKALRKTPW
                     VRVDSRAYLKTRLVDFLIGDWDRHEGQYRWALVGEGDQARWLPIPRDRDQAFVRYDGA
                     LLGVARLVVPKLVVFDVDYPSAYAATYNGRHLDRRILTDLAWPAWDSVARGLQVRLSD
                     QLIDEAVHQLPAEYAARNGAALRRMLKARRDRLREAARGFYDYVSGQILIDAGHAEDQ
                     VEAVRHADGRTEVSISRVGANAPYYHRTFTSKETKEIRIFLYDGADRARVRGKGPGPT
                     VRLIGGNGVDSLADESHTRAFRFYDADGNTVANGSRVDTRSYVAPDDTTDNVPQLQDW
                     GATVTPQPELHLSAQTGLAIGMGINRVGYGFRRHPYSSLHSASLEYSFKRAAARAQLN
                     TRWRMVNREIYFGFNLFGSAIEGGRFYGFGDTLRSPGPSDQYLALREAYEVSPYIGLG
                     LDGPARFWLLLRARHTITDISDQTNFTAAISRARPAGLGDVGQLGPAVRFEYDTRDTR
                     VATTRGVRIQLEGDYFPLTWGRGEGPFGSIEGSAATYLSPAFAPERLTLALRAGGRQV
                     WGEFPYFEAAYLGGKRSLRGYPRDRFAGDRAVFGNAELRLKLLDSRFLFPAEIGVLGI
                     ADGGRVWHNGNKGDWRTDLGGGIWISVLSRTQGLSLGVAQGDEGGRFWFSLGTPF"
     gene            complement(7923..10469)
                     /locus_tag="VGA78_00400"
     CDS             complement(7923..10469)
                     /locus_tag="VGA78_00400"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9892342.1"
                     /translation="MRGWGVTLLAGLGLTTEAWGQSRPSTARDSVTVTADSTLRRGRL
                     TRWLLGPTYRELWATPIRVALLDPDKFAGGLTPLKRGGGMQTRSLRFQGADGRQYQFR
                     LVAKDPEIEDSGFDGVVARKVLRDQTSANHPGAVLVVPPLLKAAGILHAPPRLRYLPD
                     HPRLGEFRQEFGNQLGTIEERPTDGDKKVRGFAGATKVESTPDLLEALRKRPWIGVDS
                     RTFLAIRLIDLIVGDWDRHEDQYRWALLGDGECARWQPIPRDRDQAFARFDGKALALA
                     RVVAPKLLVYNEDHSSPYAATFNGRHLDRRILNDLEWPVWDSVTTSVQSTISNAVIDQ
                     AVNQLPPEYQKQNGATLRRVLKARRDNLPRAARRYYDFVSRQVLIHAGDQDDRVDITR
                     HPDGRTEVRVSRAESGPPYYHRSFLPEETREIRIFLHDGADRTRVRGDGSGPLLRLVG
                     GEGADTLLNESPDETIRFYDAGEHTVAQGAELDHKPHLAVSDTNPEREPPQDWGRLSV
                     IGPRIRLSSHSGLALGLGVSRTGFGFRREPYASRHSASLDYSFKRNAFRALGSARWRR
                     VNRQTYFGFSALASGIEGGRFFGFGGATVDTFSSERTLALREAYELSPFLGYGLETRS
                     RLWLMLRARHTNTDLDHPTNRFSTLSALRPPGTGNAGQLGPVVRYEYDSRDSRVAATS
                     GLFLQLEGDYYPVTWANGEGPFGSIEGSVATYLSPVVPERLTLALRAGGRQVWGDFPY
                     FEAASLGGKRTLRGYHRDRFAGDRSLFSNAELRIKVADNRRFIPIEIGLLGLADAGRV
                     WSQDNPGSVWHTDLGAGLWFSALSRTQGLSLGIAHGGEGGRFWLALGTPF"
     gene            10661..10897
                     /locus_tag="VGA78_00405"
     CDS             10661..10897
                     /locus_tag="VGA78_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892343.1"
                     /translation="MRQNDRLHEGQGIGEQAAFFLDRYLEAGDTLVRQVEDVLGVVQE
                     RGCVMVAAEQEDLPIQLENLRSCSGVRFPRPTSS"
     gene            complement(11101..>11410)
                     /locus_tag="VGA78_00410"
     CDS             complement(11101..>11410)
                     /locus_tag="VGA78_00410"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX9892344.1"
                     /translation="YTWYAKRWQRTHVNTVCKLLLFQHAFETLGCAVVGLRTDHLNFA
                     SQRAIEALGASRDGTIRHDLLRRDGSVRDTVRYSVLAAEWPEVKRKLQDRLSRHGPAG
                     "
BASE COUNT         1995 a         3705 c         3829 g         1881 t
ORIGIN      
        1 gaggtctttg tctgggacgg gggaaggtgg atccatccca gctggcacat ggatttcgac
       61 gggccctgaa cgaaagccac tcggccgtta gggtcgtttc ccctgttccg cggcttcgag
      121 caacgccgcc accgacgcga atcctctctc ccgggcgacc tgggcaggcg tcactcctgc
      181 caggttggtc agcttggggt tggcccctgc cttaagtagc tccgtggccg cttccagcga
      241 tcccgcctca gcggcgtgat gcagcgcggt gaacccggtg cggttcgcgg tgtcgatctt
      301 ggctcccgcc gcgaggagca ggcgaatggc tggcacctgg ttgttgagcg ctgcccagtt
      361 gagcgcgcgt ctgccgttgg cgctccggcg ggtgtcgagc gagtcgacct tggcacccgc
      421 ggtcagggca ccgcgtaggg ccgtcgtatc acccgagatg gccgcctccc ataattgaac
      481 ctgggcgtcc tgggcctgga ccggggcgga cgccccggct ccgatgatca gcagaaagat
      541 ggcgcgcgat cgcatgacgg actcctggcg tgggtacggc ttgggagcgg ttctctacgc
      601 aacgtcctta cgaatggttt cgtagcggtg acgcccggca tgccggcggg gtctgttggt
      661 gggaagcccg gattcaggtc ccctgtcatc ctgagcccag cgaaggatga cgccttgctc
      721 acgaacttgg agccacaatg tccagaaagc cctgccaatc cctggcggcc ggcgcgctcc
      781 tgaccggcct gctgatggcc tgcagtgacg accccaccgc gccggccggt ccgaccgccg
      841 agcttcgtct gctccatgcc acctccaacc tgggcgcgct cgacgtggag gtggccagct
      901 ccaccgtgat ccagggcatc accttcggaa acgcatcggc gatcaccccg gtccccgcgg
      961 gcctgcaaca cctgacaatc cgctccggtg gaacggtcgt ggggcagatc gacgccaacc
     1021 tcaccaccga gcacatcaac gcggtgaccg tcgtggccgg cgtcccgcag ctcagctcga
     1081 ccgtggtgcc cgacaccggt caggcggcgc ccaaccgggc caacctgcgc ctggtgaatg
     1141 tggtcgggtc caacactgcc gatcccaccc tgctgcacgt gctgatcaac tttcccgggg
     1201 tcaaccccga ctcgacggca cgaatcggtc tcgataccaa ggtcgccagc tacggcgccc
     1261 tgatgtattt cgatccgggc agtttccggc tgcgctacgt cccgcaaggc caatcgactg
     1321 ttctggcgga gaccaccttc aatattgccg ccggggagaa gaaggcggtg gtactggagc
     1381 gtgacgcggc gggaacctac cggatccagg tgctggtgga gcagtgaccc gaaggttcgt
     1441 cacagcttgt cacagtccag ctggatggcc gcttcggccc agggctgcac cagttggcgg
     1501 acctcgatcg tcaggccgcg aagcagcagg tggtcggaca tcacttgccg gttgccgtaa
     1561 agctcgcgga cccggggatc ggaaccaagt tggtcgagtc tttcatccga cgccgagtcc
     1621 ggggccagcc ggatgccgat ggagcccttc ccggtgctgt cgagaaccaa gggcagcggc
     1681 tcggtccagg aaccgctgcc gccgtaatcc cagccgaaac cggagaacgc caccgggctg
     1741 ccttgcagcc gctgcagctc tgccagcgtc gtgccgatgg ttaccccccg agtagtccgc
     1801 caggcggatg gatggcggcc gattcggacg aaagccaccc gggtacgggc agaatcggcc
     1861 caggccacct cggcctcgag ctccttgcct tcgagaacca gagttccggg actacagatc
     1921 ccctcaccca gatggaccgg tcgtctggcc actgcctcgg ggccaaacca acgcaccagt
     1981 tgatcctcgg tcgtctccgg tccgatcgcg cccacccggg ctccgggtag gatggttcga
     2041 tgactggagg ggtaggtcgt gtccggcacg aggtcgagcc gctcgagccg gagggtgtcg
     2101 ttctgcagcg tcaggcgggc ccgcgcggtg aagagcgggc agcagtttcc gtctcccggc
     2161 agatacaccc agccatgcgc gatcagcgag tcggtgaagg gccgaacccc cttccataac
     2221 ccccacccct ccggcagcaa agcccgaatc tgtggggcat aggcttgctg caccagttgc
     2281 cacgggaccg acgctttgag gcgaaagacg tcccagcggc agccaccggt tccatcgaca
     2341 caggtgacca gctcgaggaa atgggccccg gagccggccg cgatccgagg caggccggga
     2401 tgctcatacc ggctgtcatg ccgatcgtgc catatcgccc ggatggtccc cttggcgcgg
     2461 ccggaagtga agatgacgat ctcctcctcc cgcaccgtat cgggaaagag tttcaggtct
     2521 tccactcggg tttgcgagtc agccccaaaa accgatacgt gctccacgat cgcgacctgc
     2581 cagatgacgc tgccgatacg gcccagcgat tcgaaccgcc gcactcgaca ggcgcgcgat
     2641 acgatgctat cggagagggt ctcccgcggc ttgttccacg aaagcgaaac gcattggcgg
     2701 gcggcctggt cgggcgagag ctcggcttcg gtccggatcc actcaccggg cagcgatgag
     2761 tcctggtggg gttgggctgg gacgcaggtc gaccccaaca ggctcaagaa catcccgcca
     2821 agccaaagcc gctcgggtgc catgctcgcg ctcaataggg cggtgagagc tgaacggtgg
     2881 tctccggctt acttcaggcc gagttttttc ccggccgcca acagtgcgat cgattcgcga
     2941 acgcggtttt cccgtgtaac cggtcgcttc gccgtatgaa tccaagccac gaaatgacgc
     3001 cggtaggttg gcgcgagcgc ctgaaaggtg cgccacgcct ttggattggc cttcagggct
     3061 ttggcgatgt aggccggcag gtcggggatt gacggacgcg gcgcatagct gcggtcggtt
     3121 ggtgctgcag ccagacccgg cgccgctagc aggcccttct ccttgagctc ggcccagcgc
     3181 ttgcggttga catccgacca cttactggtg ggctgcctcg gcgtgaactt gcgagcgtaa
     3241 cggtcctcat cgagacgctt gatcaggcta tcaatccagc cgaagcacaa cgcctggcga
     3301 acagcctctt cgtaggggac tgatttcacg cccgtgtggt ccttgtgaaa caggagccag
     3361 acgccaggac tcgccccatg gtgctttcgc aaccaggagc gccatcgttg gctgtttcga
     3421 acgtcgagcg tgatgtattc cgccgccatg ctctcagacc ctgctactta atgtctggct
     3481 ttgtgtacga ccagtggctg tgaatgatcc accacttacc agcgacgcga ccatagaccg
     3541 ccgtcgagtt ccagtcaatg ggacgagttg cagtaggcgt gacggtttcc cgttgtgccc
     3601 gtgtcggagg ggcgctctgg tgccatgctc gacctcaata gtgcggtggg agctgaacgg
     3661 tggtctccat cccgtgcagc accgcgcccc catgcatcag gacgtgggcg acaaccgccg
     3721 cgagcgggct gccacagagc aagtagccga gcgtgatgat caggttgccg accacgggct
     3781 gaataacctg gggaccccgg aattcgtcga acccgagatg atagagcgcg gtgaccagcg
     3841 cgctggccgc cacagccacg ccggcccacc gcgtccgccc tcccggcgag cggagcacct
     3901 cgggcggctg tgacccgtag agcgtgagga cggggatgac cgagagcaac acggcgtccg
     3961 ccgtgccgta caccactccg taccaggcca gatctgccag caggccaagt ccggttgggc
     4021 cgctggaggc gggctgcgaa aagacctgga acagcagcag cgcaccgatc agcagcccga
     4081 aaacgacacc ggtccgcgcg tggcggcggg tctggagcag gaggctgacc cgttcgcgtg
     4141 aggcgtacag tgccagaaga atggacactg ttaccgagta ggcgagaaca aaccagggcc
     4201 tcggccaatg gagcaggctc gaatagatcc gggaggagcc gaatccgacc gcccccgcca
     4261 gcaggaccca cttccaggga agatccgctc tgatcaccag gcctccgctt catcccgatc
     4321 tcgtttggct ccaaagcgcc gcggaaggtc ccgcgcgagg caactgtagg ccccaatggt
     4381 gtgtcccacc agtatgccat tccagggcca ggttcgaaat gggtaagaca gtggggaagg
     4441 ggatcctggt gctggcagcc gtcgtgtcca gtctcgcgct gcaaagctcc ccgcgggacg
     4501 accagtaccg gctgcccttt ccggccggcg acagcgccag gctgatccag ggaaacaacg
     4561 gtccctatgg acacaccggc catgcccggt acgccttcga tttcatcatg tccatcggca
     4621 gcccggtgac ggccagccgg aaggggcagg tcgaggcgac cgaggaacgg tttcaggatg
     4681 gcaatcatac gccgggccag gagaactttg tcatcatccg gcatgcggat tccaccttcg
     4741 cccgatacta ccacctgact cacaacggcg cgctggtgga tgtggggcag gcggtgcaac
     4801 ctggcgacac ggtcggacgg agtggaaaca ccggggccag cgccggtccg cacttgcact
     4861 tcgacgtcac cagcggctgc ttcgcctggg gctgtcagac acgggccatc cgattccgga
     4921 acgccggcgc cgactcgctc atcccgggtc gaacttatcg cgcggggaac gatcggtgtc
     4981 gtcggcgaat aataccctga ctgattgatc cgcagatgac gccggtagcc aagcttattg
     5041 ccagacgtcg gcaaccgtct ggtagtgttg gcgtgttgtg agggatcggc gtcatcggcg
     5101 gtatctgcgg ataataccct gactaattga tccgcagatg acgccgatgg ccaagctaat
     5161 tgcgcgacgt cggaaaaccg tcaggagaag tccgagcact tgtggacgct gagcctcaga
     5221 ccttcccacc cctcattcgt cgttatcggc ctcgaggtcg gtcactgggc ccattgtgag
     5281 gccgcgtaga gtatcgcggc cggctcggcg atttcgttgg ccgcagggtc gacgcaaggc
     5341 cggagttgcc tcagaagggc gtgcccagcg agaaccagaa ccgcccaccc tcgtccccct
     5401 gcgccacgcc gagcgacagg ccctgggtgc gcgacaagac gctgatccag atcccgcccc
     5461 ccaggtcggt gcgccagtcc cccttgttgc cgttgtgcca gacccggccc ccatcggcta
     5521 tgcccaggac gccgatctcg gccggaaaca ggaaccggct gtccagcagc ttgaggcgca
     5581 gctcggcgtt cccgaacacg gcccggtcgc cggcgaagcg gtcgcggggg tagccgcgga
     5641 gcgagcgctt gccgcccaag tacgcggcct cgaagtaggg gaactcgccc cagacctgcc
     5701 ggccgccggc ccggagggcg agggtcagcc gctccggcgc gaaggctggt gagagatagg
     5761 tcgcggcgga tccttcgatc gatccgaagg gaccttcacc ccggccccag gtcagcggga
     5821 agtagtcgcc ctcaagctgg atgcggacgc cccgagtggt tgccacccgg gtgtcgcgag
     5881 tgtcgtactc gaagcgtacc gcgggaccca gctggcccac gtcgcccaag ccggcgggcc
     5941 gcgctcggct gatcgccgcg gtgaaattgg tctggtcgct gatgtcggtg atggtgtgac
     6001 gggcccgcag caagagccag aaccgggcgg gaccgtccag gcccaggccg atgtaggggc
     6061 tcacttcgta ggcctcgcgt aatgccaggt actgatcgga ggggccgggc gagcgaagcg
     6121 tgtccccgaa cccgtagaac cgtccaccct cgatggccga cccgaagagg ttgaacccga
     6181 agtagatctc gcggttcacc atgcgccacc gggtgttcag ctgggctcga gcggcggccc
     6241 gcttgaacga gtattccagc gaggcggagt gaagactgga gtaaggatgg cgccggaagc
     6301 cgtagcccac ccggttgatt cccatcccga tggcgaggcc ggtctgggcc gagaggtgga
     6361 gttccggttg gggagtgacg gtggctcccc aatcctgcag ctgcgggacg ttgtcggtgg
     6421 tgtcgtccgg cgcgacgtac gatctcgtgt ccacccggct tccgttcgcc acggtgttgc
     6481 cgtccgcgtc gtagaaccgg aacgcgcggg tgtgagactc gtccgccaga gaatccactc
     6541 cgttaccgcc gatcagccgg accgtcggcc ccgggccctt gccccgcacc cgggcccggt
     6601 cggcgccgtc gtacaggaag atccggatct ccttggtctc tttcgaggtg aaggtccggt
     6661 gatagtaggg cgcgttggct ccaacccggc tgatgcttac ctcggttcgg ccatcggcgt
     6721 gtcggactgc ctcgacctgg tcctcggcat gcccggcatc gatcaggatc tgccccgaca
     6781 catagtcgta gaagccccga gccgcctcac gcagacggtc tcgccgggcc ttgagcatcc
     6841 ggcgaagggc tgcgccgttc cgggccgcat actccgccgg cagctggtgc acggcctcat
     6901 cgatcagctg gtcggagaga cgaacctgaa ggccgcgagc cacggaatcc cacgccggcc
     6961 aggcgagatc ggtgaggatg cgccggtcca gatgccttcc gttgtaggtg gcggcgtacg
     7021 cggaagggta gtcaacgtcg aagacgacca gcttcggaac caccaagcgg gccacgccga
     7081 gcagcgcgcc gtcgtagcgt acgaaggcct ggtcccgatc acgcgggatg ggcaaccatc
     7141 gggcctggtc accttcaccc accagggccc agcgatactg gccctcatgc cggtcccagt
     7201 ctccgatgag gaaatcgacc aggcgggtct tgaggtaggc gcgactgtcg acccggaccc
     7261 agggtgtttt ccggagggct ttgatcagat cctcagtccc ctctacccgg gtcgcaccgg
     7321 cgaacccgag aaggttcttc tcttggtcgg cgatgggccg ttcctcgatg gtgccgagct
     7381 ggtttccgaa ctcctgacgg aactcaccca gacgaggatg gtccggcagg tagcggagta
     7441 gtggcggggc atgcagtacg ccggccgcct tcatgatcgg cggggcgatc aacgcgcccc
     7501 ccggatgaat ggcgctcatc tggtcgcgga ccaggtcgcc cacaaaggtg ccgtcgagct
     7561 cttcacccac gacatcgccg gggtctttgc ggaccagtcg gaaggtgtac tctctgccgt
     7621 tggcgccctg gaaatgcaac gagcgggtct ggagtccgcc gccgcgtgcg agcggggtca
     7681 gtcctcctgc gaacgcgtcg ggatccagga cctcaacccg aatcggcgtg ctccacaact
     7741 cccggtaggt cgagcccagc agccactggc ccaatccgcc tcgccggaag ctggaatcgg
     7801 cgacgacggt gaccgaatcg ggatctttgg gcggacgact ctgggcggtt gccgctgagc
     7861 tgacggcgag accggcgccg aggcatgtga gaacgcgatg atacctcagc atgagccctc
     7921 cactaaaacg gcgtgccaag cgcgagccag aagcgcccac cttcgccgcc gtgcgcaatg
     7981 ccgagtgaca gaccctgggt ccgtgagagg gcgctgaacc agaggcctgc gcccagatcg
     8041 gtgtgccaga cacttcccgg gttgtcctgg gaccagaccc ggccggcgtc agccagtccc
     8101 agcaggccga tctcgatggg gatgaagcgc cggttgtcgg cgacctttat ccggagctcc
     8161 gcgttgctga agagcgagcg gtcgccggcg aagcggtcgc ggtgatagcc gcgcagggtc
     8221 cgcttgccgc ccagggaggc tgcctcgaaa tagggaaagt cgccccagac ctgccggccg
     8281 ccggcccgga gcgccagcgt cagccgctcc ggaaccacgg gcgagagata ggtggcgacg
     8341 ctgccttcga tggagccgaa gggcccttcc ccattggccc aggtcacggg gtagtagtcg
     8401 ccttccagct gcaggaacag cccggaagta gcggccactc tggaatcgcg tgagtcatac
     8461 tcgtagcgaa ccacgggacc gagctgcccg gcgttgccgg tgccgggggg ccgcagggcc
     8521 gagagggtcg aaaagcggtt ggtgggatgg tcgagatcgg tgttggtgtg gcgggcgcgg
     8581 agcatgagcc agagccggga ccgggtctcg aggccgtatc ccaggaacgg actcaactcg
     8641 taggcctcgc gcagagccaa ggttcgctcc gagctgaagg tgtcgaccgt ggcgccaccg
     8701 aatccaaaga accggccgcc ttcgattccc gacgccaggg ctgaaaaccc aaagtaggtc
     8761 tggcggttga cccttcgcca ccgggcgctt cccagggccc ggaaggcgtt tcgtttgaac
     8821 gagtagtcga gtgacgcgga gtgacgactg gcgtagggct cgcgccggaa gccgaagccg
     8881 gtgcggctca cacccagacc cagggccagt ccggaatggg aggagagccg gattcggggt
     8941 ccgatcaccg agagtctgcc ccagtcctgg ggaggctcgc gctcggggtt ggtatccgag
     9001 accgcgaggt ggggcttgtg atcgagctcg gcgccctgcg ccacggtgtg ctcgccggca
     9061 tcatagaacc ggatagtctc gtcaggcgac tcgttcagca gggtgtccgc tccctcgcct
     9121 cccaccaggc ggagcagggg accagaaccg tcgccgcgca cccgggtccg gtcggccccg
     9181 tcgtggagga agatccggat ctcgcgggtc tcctcgggca gaaagctccg gtgatagtaa
     9241 ggcggcccgc tttcggcccg gctgacgcgc acctcggtgc gtccatccgg gtggcgggtg
     9301 atatccaccc ggtcgtcctg gtcgccagcg tggatcagga cctggcggga cacgaaatcg
     9361 tagtaccggc gggcggcgcg cggcagattg tctcgcctgg ccttgagcac ccggcgaaga
     9421 gtggcgccgt tctgcttctg gtactcgggc ggcagctgat tgaccgcctg gtcgatcacc
     9481 gcattgctga tggtcgactg gacgctggtg gtcaccgaat cccacaccgg ccactcgaga
     9541 tcgttgagaa tgcgccgatc caggtggcgg ccgttgaagg tcgcggcata gggtgaggag
     9601 tggtcctcat tgtagaccag cagtttggga gcgaccaccc gggccagggc cagggccttc
     9661 ccgtcgaagc gcgcgaaggc ctgatcccgg tcccgcggaa tgggctgcca gcgggcgcac
     9721 tcaccgtcgc ctaacaacgc ccagcgatac tggtcctcgt gccggtccca gtcgccgacg
     9781 atcagatcga tcagacggat ggcgagaaag gtccggctgt ccaccccgat ccagggacgt
     9841 ttgcggaggg cttcgagcag gtcgggggtg ctctcgacct tcgtggcgcc ggcgaagccg
     9901 cgaaccttct tgtctccatc ggtggggcgc tcctcgatgg tcccgagctg gttcccgaat
     9961 tcctggcgga actcgcccag ccggggatga tcgggcaggt atcgaagccg gggcggggcg
    10021 tgcaggatgc cggcggcctt cagcaagggc ggcaccacca gcaccgcgcc ggggtgattg
    10081 gcgctggtct ggtcccgcag caccttgcgc gcgacgacac cgtcgaaccc gctgtcttcg
    10141 atctccgggt ccttggccac cagccggaac tgatactgcc ggccatcggc gccttggaag
    10201 cgcagcgaac gggtctgcat tccgccgccc cgcttcaggg gcgtcaatcc gccggcaaac
    10261 ttatcggggt cgagcagtgc gacccggatc ggcgtggccc acagctcgcg ataggtggga
    10321 ccgaggagcc aacgggtgag tcgacctcgg cgcagggtgg agtccgcggt gacggtcacc
    10381 gaatcccgag cagtggacgg acgactttgt ccccaggcct cggtggtaag cccaagtccc
    10441 gccagcaaag tgacacccca acctcgcatt gctgctccat gctggtccct gtaggagaag
    10501 acggagcgga cccggctgaa ccccacgtct ggggaacatc catgtcagca tcagtgaacg
    10561 agacgggtca aggtgcacca acggggtgca gtcgtacgag catcaaccaa cccgacgcgg
    10621 ttgagcagtt aggccagttg gttcaggccg atcgtcgccc gtgcgccaaa acgaccgcct
    10681 gcatgagggg cagggcatag gagagcaggc cgcgttcttc ctcgaccggt accttgaagc
    10741 gggcgacacg cttgtccggc aggtcgagga cgtgctcggc gtagtacagg aacgtggctg
    10801 tgtcatggtc gcagccgagc aggaggatct tcccatccag ctcgagaacc tccgttcctg
    10861 ctccggggtg agattcccgc gacccacatc atcgtagtaa tcggggcagc cggcgtacat
    10921 gatgagggtg ccggtggagg tgagggcgtc gccgagggcc agatgaatct ggtccggccc
    10981 gccggcgact tcgcccacgg cacggaccga cgcgtgcaac atgaccgtat ccccgggcgc
    11041 aacgcccagg cggcgatcgt cgtcctcctg ctgctgccga gagaacatcc ggaatacctc
    11101 tcagcccgcc gggccgtggc gggacaaccg gtcctgcaac ttccgcttga cctcgggcca
    11161 ttccgcggcc agcacgctgt agcgcacggt gtcgcgtacg ctgccgtcgc gccgcaacag
    11221 atcatgccgg atggtcccgt cccggctcgc ccccagcgcc tcgatggccc gttgagaggc
    11281 gaagttgaga tggtcggtgc ggagtccgac gacggcgcac cccagggtct cgaaggcgtg
    11341 ctggaacagc aggagcttgc agacggtgtt cacatgggtg cgctgccagc gcttggcata
    11401 ccaggtgtag
//
LOCUS       DASWKS010000010         7722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2222096, whole genome shotgun sequence.
ACCESSION   DASWKS010000010 DASWKS010000000
VERSION     DASWKS010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7722
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2222096"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..1378)
                     /locus_tag="VGA78_00415"
     CDS             complement(206..1378)
                     /locus_tag="VGA78_00415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HEX9892345.1"
                     /translation="MAEPIGAARILSQAVLAFAVACGAGGPADVLEPGPATPPPPPPG
                     SSLTYRFGAKFEPPEGRVVHGIGQWEVYNAKYYALLPADQQPAAELIFVDLGDTPRGW
                     EPEKLAARMAAISSSGRIPSVDIALRGLQPTPAVLATLPDPLYGIDHEVANGTKYDAR
                     IMDVVGIMKGFRKPVMMRIGGEFSGWWNGYHPYEYPKAFRKIVSMFRQAGVNNVAFVW
                     CFEPAAPDDFDAVSASGQPKWYPGADVVDWFSIDLFAAHDVGGPTTGHGGTSTAYART
                     LGFLDMAVAQGKPVVIAESAPAHYDLGAADQADAAWKEWFSPYFSLIATRPEILWFHY
                     INYDWSKASYYASSGWKNNDLAASPGLAQSYLGELAKPKFLHAGEQHQLKDYLLYH"
     gene            complement(1486..3057)
                     /locus_tag="VGA78_00420"
     CDS             complement(1486..3057)
                     /locus_tag="VGA78_00420"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015370 - solute:sodium symporter activity
                     [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/solute symporter"
                     /protein_id="HEX9892346.1"
                     /translation="MTSLDLGVMALYLLLVVGVTAYVALRQRTTDDYYVAGRSLGAGY
                     IAASILATQVSAVSLIGGPAFVARGGGLVWLQYELAVPLATIALVAVVAPVLRRGAFV
                     TIYDYAGQRFGPTSRVALALVFLLARSLASGVVLYAVSLPLAVAFGFPLGWTLLAIGG
                     FSVLYTTVGGIRADVFTDVLQLVVLVVALLICAVSAVDALGGLGQALALVPADRTRAL
                     VLDQHGLGDGATFAFWPMVLGGFFLYVSYYGFDQSQAQRLLATRSVKAAQQALVLNGL
                     LRFPLAALYCFLGLLLAAWLAVDPQFGAAHLGERADALVPHFLMEFAPAGIRGLFIAG
                     LFAAAMSTLDSSFNSLSAVTLRDVMGRTEEQARSLWLARGLSLLWGTFCTGSAFLFAR
                     SSETVIESINRVGSLFYGPVLGLFVLGMLSRTTSERAGLAGLSAGLGSVAAVWWLFPQ
                     VSWMWWNPLGFLVTCAIALLLAHWLPGPEVGPELVWRAAQPVSEQRTLRRATAGLLVA
                     FVVLVVLSAALPSLL"
     gene            3159..5831
                     /locus_tag="VGA78_00425"
     CDS             3159..5831
                     /locus_tag="VGA78_00425"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9892347.1"
                     /translation="MDPFDSLRRWIRVRPRTATVEQDVDDELRFHLESRIADQVRQGV
                     DPVLARRIALAEFGSVAGAGRELAGMDRRWTRRRARGFWWSDLGRDLRFAGRTLLRRP
                     GFTAALLLTLGLGIGATAAIFTVVHAALLRAFPYYQPDRLVHLWETYEEGAQVSEASF
                     PDFQDWRVQGQFPALEGYDPTNVTVNRDDGALFLQGARVTAGFFDLLGVRPELGRTFR
                     PGEDRPGGSDVVILTHDYWRRTLGADPGVVEQRLVINGRSHEIIGVLPARFHFAPAGD
                     AELWFPVDQGEAVRAQRLNHWLNVIGRLGPGESPDDVRARLDVVMQRLAAAFPESNSG
                     RGVRVIPLRTEIVGPARPVLLSLFGAAGILLLIACVNVASLLLAGALARCREMGVRVA
                     LGASRGRLVRQLVTESLVLSLTGAVLGLLLAHAGVRLLVSQAPIGLVDQMAWLRELRP
                     EGEVLLFTILIAVIIGLGLGLVPAGVAWSSVRGVLAGANWASETRGSRLAARDLLVAG
                     QLALTVVLLIGAGLAGRSLLHLVRQDPGFRTEGILTGRVPLSGPRYQPGAAQQVFFEQ
                     LLEQTRQLPGVQSAGAITNLPLSGGSTLTYWVEGLPEPPASQRWSVVQRGIAGDYFRV
                     MGIRLVAGRGFTPADDSLAQPAIIINQSLARKHFPDGNALGRRFRFYVIPGSAWEIVG
                     VVGDVKTGRLDEAAPPSIYYSHLQVPVNRMTLVLGTTRDPTSLTADLRRAVGAIDPAL
                     PLHDVSTMEQVVTTSPAVVARRFPLLLIGFFAVSALTLALVGVYGVVSYAVTRRSGEL
                     AIRAALGATGPQLRRPVVRHGGLLAAAGIGIGTMLAGGLTRFLAGTLYGIPATDPVTY
                     VSVALLLLAVTIAATWIPASRAAAAPPAAALKSE"
     gene            5839..6177
                     /locus_tag="VGA78_00430"
     CDS             5839..6177
                     /locus_tag="VGA78_00430"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9892348.1"
                     /translation="MSENLDLLQGTLDLLVLKALLAGPRHGYAVARWIRDTTADTILV
                     EDRALYVALHRLEARDWVESSWGLSENNRRAKFYRLTRAGRRALESKAADWTSYANAV
                     FKVLRTSESE"
     gene            complement(6181..6840)
                     /locus_tag="VGA78_00435"
     CDS             complement(6181..6840)
                     /locus_tag="VGA78_00435"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX9892349.1"
                     /translation="MILVATFNLYLATRLERAIEVAASEPALAGADVLALQEADETAA
                     HRMADALRLGYVYYPALVHPRTRRNFGPALLSRWPIVDDRRLELPHIGLTGMPRIAVA
                     ATLQLRDQPVSVYVVHFGTMREILPNQQKAQAQRVLADAAARPGPAIIAGDLNRKSLG
                     ALFQSAGWRWVTREVGRTHLVWSFDHVFLRGFDGARVRAGSVRAALAASDHRAVWAEV
                     G"
     gene            6975..7220
                     /locus_tag="VGA78_00440"
     CDS             6975..7220
                     /locus_tag="VGA78_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892350.1"
                     /translation="MQVFRNIGVRAAAGRMAARTRSPFDGVQLRNSLRRAKRRTRAAV
                     DRAITTIKHDRRAQAKVAGVALALVTAGLVARARMKH"
     gene            7271..>7722
                     /locus_tag="VGA78_00445"
     CDS             7271..>7722
                     /locus_tag="VGA78_00445"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9892351.1"
                     /translation="MLTLTLSDFEKARARIAPHIHLTPLLTSRQLSELTGYDVRLKAE
                     MFQRVGSYKIRGPLNKFTFLTDEEKRRGVVCSSAGNHAQGVALAARIHGIRAVVCMAE
                     NATPAKIAATRAYGAEVVLHGRIWDEANEKAKELVRTEGLTYVSPFDDP"
BASE COUNT         1294 a         2587 c         2599 g         1242 t
ORIGIN      
        1 ccgaaggcgt gaggctcgag ttggccatcc gttcgcgtct cccgggcccg atcccaacct
       61 ggtgaagctc tacggcagag tatcggtccc aaggagcaag cgatatacca atcccaaagg
      121 cccgtgcgat cttgttgtcg ggtaacgcgt taggtgctat ctcctactca tccgcaggca
      181 acagctcccg cgtgctgcac ggtcctcaat gatacaggag ataatccttg agttggtgtt
      241 gttcccccgc gtggagaaac ttgggcttgg cgagctcgcc caggtagctc tgggccaggc
      301 ccggactcgc tgccagatca ttgttcttcc agccactgga ggcgtagtac gatgccttgc
      361 tccagtcgta gttgatgtag tggaaccaga ggatctccgg cctggtggcg atcaggctga
      421 agtagggcga gaaccactcc ttccacgcgg cgtccgcctg gtcggctgcg cccaggtcgt
      481 aatgggccgg tgcgctttca gcgatcacca ccggcttccc ctgagccacc gccatatcga
      541 ggaacccgag cgtccgggca taggccgtgg aagtcccgcc gtggccggta gtggggccgc
      601 ccacgtcatg cgccgcaaac agatcgatcg aaaaccagtc caccacgtcg gcaccaggat
      661 accatttggg ctgcccgctg gcgcttacgg cgtcgaaatc gtcgggcgcc gccggctcga
      721 aacaccacac gaaggccacg ttgttcaccc cggcctgccg gaacatcgac acgatcttcc
      781 gaaacgcttt ggggtactcg tacgggtggt agccgttcca ccatccactg aactcgcccc
      841 cgatgcgcat catgaccggc tttctgaacc ctttcatgat gcccaccacg tccatgatcc
      901 gggcatcgta tttggtgcca ttggccacct cgtgatcgat cccgtagagc gggtccggca
      961 aggtggcgag gacggccggg gtcggctgca atccccggag cgcgatgtcc acgctgggaa
     1021 ttctgccgct ggagctgatc gccgccatgc gggccgccag cttctccggc tcccagccgc
     1081 ggggagtatc gcctagatcc acgaagatca gctcggcggc gggttgctgg tccgccggca
     1141 acagcgcgta gtatttcgcg ttgtacacct cccactggcc gatcccgtgc accactcggc
     1201 cctccggcgg ttcgaatttg gcgccgaatc gataggtgag gctgctgccc ggcggtgggg
     1261 gtggcggcgt cgccggtccg ggctccagta cgtcggctgg cccacccgct ccacaggcga
     1321 cggcaaaggc caggactgcc tggctcagga ttcgagccgc cccgatcggt tcggccacca
     1381 agtgctcctc cggatgcgag ttgtctcatg ctgcctcgtt ccggagatga caatggaaag
     1441 gctcccatcc cctgatgttg cgctagcgcc gcaacccagg cggcgtcaca gcagcgacgg
     1501 cagggcggcg ctgagaacca ccagcaccac aaacgcgacc aataagccgg cggtggcgcg
     1561 tcgcagcgtc cgctgctcag aaaccggctg agcggccctc cacaccagct cgggaccaac
     1621 ctccggtccg ggaagccagt gcgccagcag aagggcgatg gcgcaggtca ccagaaagcc
     1681 gagcgggttc caccacatcc acgagacctg ggggaatagc caccacacgg cagccacact
     1741 tcccagcccg gcggacagtc cggccaggcc ggcgcgctcc gaggtggtgc gggacagcat
     1801 gcctaacacg aacaggccca gcaccggccc gtagaaaagg gacccgactc gattgatcga
     1861 ttcgatcacg gtttcgctcg accgcgcgaa gagaaaggcg gaaccggtac agaacgttcc
     1921 ccagagcaga ctcagccctc gggccaacca gaggctccgg gcctgttcct cagtccggcc
     1981 catcacatcg cgcagggtga cggccgacag ggagttgaac gaggaatcca gggtcgacat
     2041 cgccgccgcg aagagacccg cgatgaacaa gccccgtatt ccggccggcg cgaattccat
     2101 caggaagtgc gggaccagcg cgtcggcccg ctcgcccagg tgggccgccc cgaactgggg
     2161 gtcgaccgcc agccaggccg cgagcaggag tcccagaaag caatagagtg ccgccagcgg
     2221 aaaccgcagc agtccgttga gcaccagggc ctgctgggcc gccttgacgc tccgtgtggc
     2281 gagcaggcgc tgggcctggc tctgatcgaa cccgtagtag gagacataga ggaagaagcc
     2341 gcccagcacc atcggccaga aggcgaaggt ggccccgtcg cccaggccgt gctggtccag
     2401 caccagggcc cgggttcggt cggccggaac cagggccagg gcctggccca atccacccag
     2461 ggcatccacc gccgagaccg cgcagatcag gagcgccacc accagcacca ccagttggag
     2521 cacgtcggtg aacacatcgg cgcggatccc gcccacggtg gtgtagagca ccgaaaagcc
     2581 gccgattgcg agcagcgtcc accccagcgg aaacccgaag gccactgcca gcggcagcga
     2641 cactgcgtag agcacgaccc cggaagcgag cgagcgggcc agcagaaaca ccagggccag
     2701 cgcgacccgg gaggtgggtc cgaagcgctg gccggcgtag tcgtagatcg tgacgaaggc
     2761 accgcggcgg agcaccgggg ccaccacggc caccagcgcg atggtggcca gcggcaccgc
     2821 cagctcgtac tggagccaga ccagaccgcc accccgcgcc acaaaggccg gcccgccgat
     2881 caggctgacc gcgctcacct gggtcgccag gatcgaggcg gcgatgtagc cggcgccgag
     2941 actgcgtccc gccacgtagt agtcatcggt ggtccgctgc cgcagcgcca cgtaggccgt
     3001 cacgcctacc accagtagca ggtagagggc catgaccccg aggtcgagac tcgtcaccgg
     3061 cgtcctcccg cgaccatggg cgcaagatac cggtgccgcc gcccttgcgg ccgatcccgg
     3121 cggaacgtag tttccccgga aatgttccgg ggaaggccat ggatcccttc gacagcctcc
     3181 gacgctggat tcgggtacgg cctcgcaccg ccacggtcga gcaggatgtg gacgacgagc
     3241 tccgcttcca tctcgagtcg cgcatcgccg atcaggtgcg gcagggggtt gatcccgtgc
     3301 tggcccgccg catcgcactg gcggagttcg gctcagtggc cggggcgggg cgggaactgg
     3361 cgggcatgga ccgccgttgg acccgccgcc gagcccgcgg tttctggtgg tcggacctgg
     3421 gccgcgacct gcgcttcgcc ggccgcaccc tgttgcgccg gcccggtttc accgccgcgc
     3481 tgctcctgac gctgggactg ggcattggag caaccgcggc gatcttcacc gtggttcacg
     3541 ccgcgctcct ccgcgcgttc ccgtactacc agcccgaccg gctggtccat ctctgggaaa
     3601 cctacgagga gggcgcgcag gtttccgagg catccttccc cgacttccag gactggcggg
     3661 tccagggaca gttcccggcg ctggaaggct acgaccccac caacgtcacc gtgaaccggg
     3721 acgacggagc gctgtttctc cagggcgcgc gggtcaccgc cggcttcttc gatttgttag
     3781 gcgtccggcc cgagctgggg cggacgttcc gtccggggga ggatcggccc ggcgggagcg
     3841 acgtcgtcat cctcacccac gactactggc ggcggaccct gggggcggac cccggggtgg
     3901 tggagcaacg cctggtgatc aatggccgca gccacgagat catcggagtg ctgccggccc
     3961 gattccattt cgcgccggcc ggcgacgcgg agctgtggtt ccccgtcgac cagggcgagg
     4021 ccgtccgggc gcagcgcctc aaccactggc tcaacgtgat aggacggcta ggcccgggcg
     4081 aatcgcccga tgacgttcgg gcccgtctgg acgtggtgat gcaacggctg gcggccgcct
     4141 ttcccgagag caacagcggg cggggggtcc gggtgatccc gctcaggacg gagatcgtgg
     4201 gcccggcgcg cccggtgctc ctcagcctct tcggtgccgc gggcatcctg ctcctgattg
     4261 cgtgcgtgaa tgtggccagc ctcctgttgg ccggggccct cgctcggtgt cgggagatgg
     4321 gcgtgcgggt agcgctgggc gcatcccgtg gccgactggt gcggcagctt gtgaccgaaa
     4381 gcctggtgct ttcgttgacc ggagcggtgc tgggactgtt gctggcgcac gccggagtgc
     4441 gattgctcgt ttcccaggct cccatcggat tggtcgacca gatggcgtgg ctgagggagc
     4501 tgcgacccga aggcgaagta ctgctgttca ccatcctgat cgcggtaatc atcgggcttg
     4561 gcctaggcct ggtgccggcg ggggtcgcct ggtcttcggt gcgaggggtc ttggcgggag
     4621 caaactgggc ctcggagacg cgcggttcgc ggctggccgc tcgcgacctg ctggtggccg
     4681 gtcaattggc cctgaccgtc gtgctgttga tcggtgccgg tctcgccggc cgaagcctgc
     4741 tgcatctggt tcgacaggat ccgggcttcc gcaccgaggg gatcctcacg gggcgagtgc
     4801 cgctctcggg gccccgctat cagccgggag ccgcccagca ggtcttcttc gagcagctgc
     4861 tggaacaaac ccggcagctg cccggtgttc aatccgccgg agcgatcacc aacctcccgt
     4921 tgtccggcgg tagcaccctc acgtattggg tggagggtct gccggagcca ccggcttctc
     4981 aacggtggag tgtggtccag cgaggcatag ccggggacta cttccgggtc atgggcattc
     5041 ggctggtggc cggccggggt ttcacgccag ccgacgattc tctggcccag cccgccatca
     5101 tcatcaatca gtctttggcc cggaaacact ttcccgacgg caatgcgttg ggccggcgct
     5161 ttcgtttcta tgttatcccg gggtcggcct gggagatcgt cggcgtggtt ggagacgtga
     5221 agaccggccg gctggatgag gccgcaccac cgtccatcta ctacagccat ctgcaggtcc
     5281 cggtcaaccg catgaccctg gtgctgggaa cgactcggga ccccacgagt ctgacggccg
     5341 atttgcgccg ggcggtggga gccatcgatc cggcgctccc actgcacgat gtcagtacca
     5401 tggagcaggt ggtcacaacc tcgcccgccg tggtcgcgcg gcgctttccg ctgctgctga
     5461 tcggattctt tgccgtttct gccctgaccc tggccctggt gggcgtctac ggcgtcgtgt
     5521 cgtacgcggt gacccggcgt tccggtgagc tcgccattcg ggcggcgctc ggtgccaccg
     5581 ggccccaact gcggcggccc gtggtgcgac acggaggact cctggcggcc gcgggaatcg
     5641 gaattgggac catgctggcg ggggggctca cccgctttct ggccggcacc ctgtatggca
     5701 tcccggccac cgatccggtc acctacgtga gcgtagccct tctgctgctg gcagtgacca
     5761 tcgcggccac ctggattccg gcgagtcggg cggccgccgc gccacccgct gcggccctca
     5821 agtccgagtg agcgcgcgat gagcgagaac ctcgatctgc ttcagggcac gctcgatctt
     5881 ctggtgctca aggccctgct ggccggcccc cggcacggct acgcggtcgc gcgctggatc
     5941 cgggacacca ccgccgacac gatcctggtg gaggatcgcg cgctctacgt ggcgctgcac
     6001 cggctcgagg ccagggactg ggtggagtcg agctggggcc tgtcggagaa caaccgaagg
     6061 gcaaagttct accggcttac tcgggccggc cgccgcgcgc tcgaatccaa ggcggccgac
     6121 tggaccagct atgccaacgc ggtgttcaag gtgctgcgga cgtcggaatc ggagtagagc
     6181 tcagccgact tcggcccata ctgcccggtg atcgctggca gccagtgcgg cccggaccga
     6241 tcccgcccgg acccttgccc cgtcgaatcc tcgcaggaac acgtggtcga aggaccagac
     6301 cagatgggtt cgccctacct cccgggttac ccagcgccag cccgcgcttt gaaacagagc
     6361 tccgaggctt ttccggttga ggtcacccgc gatgatggcc gggcccgggc gggcggccgc
     6421 atcggccaat acccgttgtg cctgggcctt ctgctggttc gggagaatct ctcgcatggt
     6481 cccgaaatgc accacgtaca ccgagaccgg ctgatcccgc agctgcaggg tggcggcgac
     6541 cgcaatgcgt ggcatgccgg tcaggccgat gtgaggcagc tccagccgtc gatcatccac
     6601 aatcggccag cgagagagca gcgcgggacc gaagttccgt cgggtccggg gatgaaccag
     6661 cgccgggtaa tacacatacc ccaatcgcag cgcgtcggcc atgcgatggg cggcggtttc
     6721 atccgcctct tgcagcgcca gtacgtcggc tcccgcgagg gccggctcgg acgccgcgac
     6781 ctcgatggcg cgctcgagcc gagtcgcgag gtagaggttg aacgtggcga ccaggatcat
     6841 ggaactcgtc gtggtacccg acgccgggac cggacccgca aagcgcggtg cggtggaaga
     6901 accagcaagg tgtgtcatga tcagaccgtg tccccgtctc cactgagaga actagagcga
     6961 ggtgcacaat ggccatgcaa gtgttccgta acatcggggt tcgcgcggcc gccggtcgga
     7021 tggcggcccg gaccagatcc cccttcgacg gggtccagct tcggaattcg ctgaggcgag
     7081 ccaaacggcg gactcgcgcc gcggtcgacc gggcgatcac gacgatcaag cacgaccgga
     7141 gggctcaggc gaaggtcgcg ggcgtcgcac tcgccctggt aacagcgggc ctggtggcgc
     7201 gtgctcgcat gaagcactga gggcgatcgc ggtgctggtc agcatgagtt gggggcctta
     7261 cccttagctc atgctgacac tgaccctgag cgatttcgag aaggcgcggg cccgcatcgc
     7321 gcctcacatc catctcacgc cgttactgac ttcgcggcag ctctccgagc tgaccgggta
     7381 cgacgtgcgt ctcaaggccg aaatgtttca acgggtcggg tcctacaaga tccggggccc
     7441 gctcaacaag ttcaccttcc tcaccgacga agagaaacgg cgcggcgtag tgtgctcgtc
     7501 ggcgggcaat catgctcagg gtgtcgccct cgcggcccgg attcatggga ttcgagccgt
     7561 ggtctgcatg gccgagaatg ccaccccggc caagatcgcg gccacgcggg cctacggcgc
     7621 cgaggtggta ctgcacggcc ggatctggga cgaggccaac gagaaggcca aagagctggt
     7681 ccgcaccgaa gggctcacct acgtaagtcc tttcgacgat cc
//
LOCUS       DASWKS010000011         2166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2592171, whole genome shotgun sequence.
ACCESSION   DASWKS010000011 DASWKS010000000
VERSION     DASWKS010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2592171"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VGA78_00450"
     CDS             complement(<1..428)
                     /locus_tag="VGA78_00450"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase family
                     protein"
                     /protein_id="HEX9892352.1"
                     /translation="MSALRVLAIVPARAGSKSIPRKNIQLFAGHPLLAYSIAAGLQAR
                     QVARVLVSTDDEEIAERARDYGAEVPFLRPAQFAQDGTPDLPVFQHALGWLSEHEGYR
                     PEIVVQLRPTSPVRPPDCVDRAVELLTAAPEADSVRAVVPA"
     gene            complement(425..1255)
                     /locus_tag="VGA78_00455"
     CDS             complement(425..1255)
                     /locus_tag="VGA78_00455"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9892353.1"
                     /translation="MKSGETLRQFDLDGRVAILTGGAGLLGRSHALTLASAGASVVVA
                     DVDLSGAERVAEELGSSAASNCLAIETDVSNPDSVRRMAEATLKAYGRIDILVNNAAL
                     DPKFDPTHAGSHGERFEDLPFETWQQALAVNVTGMFLCAQATAPAMRQAGRGVIVNVA
                     SIYGLVGPDQRLYQREGQLPQYKPVTYSVSKAAALGLTRYLATYFAGTGIRVNSLTPG
                     GVLADHDDEFVRRYSDRTVLGRMANREEISNALLFLVSDASSYMTGANLVVDGGWTAW
                     "
     gene            complement(1308..>2166)
                     /locus_tag="VGA78_00460"
     CDS             complement(1308..>2166)
                     /locus_tag="VGA78_00460"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9892354.1"
                     /translation="TALERWRPDAAVVSNPTSLHLEVAIPAARAGCHLLIEKPVSDRL
                     KGMDELQRALAAGGGRVLVGYHFRHNPGLLRARQWIGEGAIGRPVTARAHLGEYLPDW
                     HPWEDYRSSYAARGELGGGVVLTQSHPFDYLRWLFGEPGGIWGVTRRSGTLDLEVEDT
                     AEAILEFNGGCLASVHLDYLQRPPQHWLEVTGDQGTLRWDALSGAARCWTASEGAWRE
                     QPPPAGFERNTMFLEEMRHFIAVVRGEAGPRCTLGDGIRALEIALAVRRSAEIGGRVE
                     VRHEERSPA"
BASE COUNT          373 a          763 c          686 g          344 t
ORIGIN      
        1 gcgggcacca ctgcacggac cgaatcggcc tccggtgcgg ccgtcagcag ctccacagct
       61 cggtcgacgc aatcgggcgg acgcaccggc gaggtgggcc ggagctggac cacgatttcg
      121 ggccggtaac cctcgtgctc ggagagccag ccgagcgcat gctggaacac cggcagatcc
      181 ggcgttccgt cctgcgcgaa ttgagcggga cgcaggaaag gtacctccgc cccgtaatcc
      241 cgggcccgct cggcgatctc ctcgtcatcg gtcgacacga gtacacgggc cacctggcgg
      301 gcttgcagcc cagccgcgat gctgtaggcc agcagcggat gcccggcaaa gagctggatg
      361 ttcttgcggg ggatcgattt cgatccagcc cgggctggga cgatcgccaa tactcgcagc
      421 gcgctcacca agccgtccaa cccccatcta ccaccagatt cgccccggtc atgtaggaag
      481 aggcatctga caccaggaag agcagcgcgt tgctgatctc ctcccgattc gccattcggc
      541 ccaggaccgt ccggtccgag tagcgccgga cgaactcgtc atcgtggtcg gccaatactc
      601 cacccggggt caggctgttc acccggatgc cggtcccggc gaaataggtg gccaggtaac
      661 gggtcaggcc caatgcagcc gccttcgaaa ccgagtaggt caccggcttg tattggggga
      721 gctgcccttc ccgctggtac agccgctggt cggggcccac cagaccatag atggaggcaa
      781 cgttcacgat cacgcctcgc ccggcctggc gcatggccgg cgccgttgcc tgggcgcaga
      841 gaaacatccc ggtgacgtta actgccaggg cctgctgcca ggtttcgaag ggtaggtctt
      901 cgaaccgctc accgtgagag ccggcatggg tcgggtcgaa tttgggatcc agcgcggcat
      961 tattcaccaa gatgtcgatc cgcccgtacg ctttgagagt cgcctccgcc atccggcgca
     1021 ccgaatccgg attggagacg tcggtctcga tcgccagaca gttcgaggcg gcggagctgc
     1081 caagctcctc ggccacccgc tctgcgccac tcaggtcgac gtcggcgacg accacgcttg
     1141 ccccggcgga agcgagggtc agagcatggg aacggccgag caagcccgcc ccgccggtca
     1201 gaatcgccac gcgaccgtcc aagtcgaact ggcgcagcgt ctctcccgat ttcatcgcaa
     1261 cctgcacgat cctgatcgat cgcacacagg ctgttcagcg cgggcgatca tgcggggctc
     1321 cgttcctcgt ggcgcacttc gacccgtccg ccgatctcgg ccgatcgacg tacggccagg
     1381 gcgatctcca gcgcccgaat tccgtccccc agcgtacagc gcgggcccgc ctcgcctcgc
     1441 accaccgcga tgaaatgcct catctcctcc aggaacatcg tattccgttc gaacccggcc
     1501 ggcggcggct gctcgcgcca ggctccctcc gaggcggtcc aacagcgggc ggccccgctg
     1561 agggcgtccc agcgcagggt tccttggtcg ccggtcacct ccagccaatg ttgaggcggg
     1621 cgctgcaggt agtcgagatg gacgctcgcc aggcagccgc cgttgaactc aaggatggct
     1681 tctgccgtgt cctcgacctc gaggtcgagc gttccgctgc ggcgggtcac gccccagata
     1741 ccgcccggct caccgaacag ccagcgcaag tagtcgaacg gatggctttg ggtgagcaca
     1801 acgccgccgc ctaactcacc ccgcgccgca tacgagctgc ggtagtcctc ccaggggtgc
     1861 cagtcgggca ggtactcacc cagatgcgcc cgagcggtta ccgggcgccc gatggctccc
     1921 tccccgatcc actgcctggc ccgaaggagc ccgggattgt gacgaaagtg atagcccacc
     1981 agcacccgtc ctccgcccgc cgccagcgcc ctctgcagct cgtccatccc tttgagtcga
     2041 tcggagaccg gtttctcgat gagcaggtgg cagccggccc gggcggccgg aatggcaacc
     2101 tccaggtgaa gggaggtcgg attcgacacg acggccgcat ccggtcgcca acgttcgagc
     2161 gcggtt
//
LOCUS       DASWKS010000012        16110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3331355, whole genome shotgun sequence.
ACCESSION   DASWKS010000012 DASWKS010000000
VERSION     DASWKS010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3331355"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VGA78_00465"
     CDS             complement(<1..693)
                     /locus_tag="VGA78_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEX9892355.1"
                     /translation="MTSVAVPTAEPRSGEPAVTPALAREHNLTPKEYDAICGILGRTP
                     TLTELGVFSALWSEHCSYKHSRPVLRTFPTTGPQVVQGPGENAGVLRLPNGWAVAFKI
                     ESHNHPSAVEPYQGAATGVGGILRDVFTMGARPVAVLNSLRLGPLDDPRNRYLFAGIV
                     KGVGDYGNCVGVPTLAGEVYFAPCYSGNPLVNAMCVGLLKERDLIRARARGVGNLLLA
                     VGARTGRDGIHGA"
     gene            complement(690..1022)
                     /locus_tag="VGA78_00470"
     CDS             complement(690..1022)
                     /locus_tag="VGA78_00470"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HEX9892356.1"
                     /translation="MSDPKKPSKNEDEYFAKLDAELLAKTRERERLQRDDVERRSHYM
                     KCPKTGHDLITTVIHGVQVDTCPECGGMWLDSGELDTLLKHEEPGLFRKVFGDVVTGM
                     RRGKRDSA"
     gene            complement(1045..1740)
                     /gene="purQ"
                     /locus_tag="VGA78_00475"
     CDS             complement(1045..1740)
                     /gene="purQ"
                     /locus_tag="VGA78_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEX9892357.1"
                     /translation="MVTVGVVSFPGSNCEAETFRAAERAGAGTVSIWHRDTDLKGADV
                     VILPGGFSYGDYLRTGAIARFSPVMTAVTRHAEAGGAVLGICNGFQILCEAGLLPGAL
                     VRNGGLHYLSRPVDVRIERNDTVFTREYHEGQVIRIPVGHGDGRYVAPPEVLDMLQAD
                     GLVVLRYHSGVMLDAPANPNEATDDIAAICNPAGNVMGMMPHPERLADPNLDSDVGLG
                     VFHSMVSSLAPAQ"
     gene            complement(1740..1991)
                     /gene="purS"
                     /locus_tag="VGA78_00480"
     CDS             complement(1740..1991)
                     /gene="purS"
                     /locus_tag="VGA78_00480"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEX9892358.1"
                     /translation="MKTYQVHVRVMPRVGLLDPAGQAVEHALASLGFGGASNVHLGKA
                     IALDLEGRDEADARDRARAMCERLLANPVTEDFTIEVTA"
     gene            complement(1988..2800)
                     /gene="pssA"
                     /locus_tag="VGA78_00485"
     CDS             complement(1988..2800)
                     /gene="pssA"
                     /locus_tag="VGA78_00485"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEX9892359.1"
                     /translation="MTVPTPPPRGRAVRRVVFVAPSAFTLGNLFFGIWAIVSASRGNF
                     LWAGWFVVFAGVLDTLDGRVARLSKTNSRFGAELDSLVDIVSFGVAPAMIMYFLEFQS
                     AGRFAWVVCYIYVVATSLRLARFNVMVGSTPTGWFTGLPSPAAGLALATWYPFSQTSV
                     SRTALAWLELEHQELVLLMILLSVLMVSGVKYPKWPRVGFRTAGGIFALVLHVVIVGG
                     AILVPSSFLFPFLLGYAVFGILRFVVFSLFDRPDRFRLRGGGSGEPREGTHQ"
     gene            complement(2797..3423)
                     /locus_tag="VGA78_00490"
     CDS             complement(2797..3423)
                     /locus_tag="VGA78_00490"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:NF003678.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HEX9892360.1"
                     /translation="MRIAPEGWPFIGIAVVVAMLLALFRLWLPFGLWLVLTLWVIAFF
                     RDPVRRGPRGEKLVLAPADGKVVSVIPIEEPAYLAGASTRVSIFMNVFDVHVNRHPVD
                     GVVEYRAYVRGKFINAAGEKASAENEQASLGIRTDYGKILVRQIAGLVARRIVTDPDS
                     GDRVRQGERLGLIRFGSRVDLFLPPAARVKAKPGDVTRAGLTVIAEWP"
     gene            complement(3423..4343)
                     /locus_tag="VGA78_00495"
     CDS             complement(3423..4343)
                     /locus_tag="VGA78_00495"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEX9892361.1"
                     /translation="MTTTLTASSLPLPLLRRGKVREVYEVDDTRLLLVASDRVSAFDI
                     VMREPVPSKGAVLTQISAFWFARVESLVPHHCLTADAGTIVTAVPALAPYRDQLAGRA
                     MLCRRTMPVPFECVVRGYLAGSAWSEYRTSGTLAGEPIAPGLEESSRLEPPLYSPAIK
                     AESGHDENVTFARLVRDMGVELAARLRDLSLAIYAAGRDYAETRGIIVADTKFEFGVD
                     SEGTLRLIDEVLTPDSSRFWPADAYQPGRSQASFDKQPLRDYLAGLRDAGQWNGEAPP
                     PRLPEEVVTATSRRYREAYRRLTGHELRAG"
     gene            complement(4340..5779)
                     /gene="purB"
                     /locus_tag="VGA78_00500"
     CDS             complement(4340..5779)
                     /gene="purB"
                     /locus_tag="VGA78_00500"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX9892362.1"
                     /translation="MTDERYQSPLGQRYASPAMQRLWGPAHRVALWRRLWLALAETER
                     ELGLEIPDAALAEMRAHLDDADLTAAAGYEKRFRHDVMAHVYAYGDQAPAARSFIHLG
                     ATSAFVTDNADLLVIRESLRLLLGRLIAVGDALAGFARRYAGLPCLAYTHFQPAQLTT
                     VGKRACLWAQDLALDSEALSQLLPALRFHGCKGTTGTQASFLDLFGGDHEKVRELDRR
                     ITRRMGFDEAFAVSGQTYPRKSDSVVLDTLSGIAQSAAKMAVDLRLLQHEGELLEPFE
                     AEQIGSSAMAYKRNPMRAERIGALARFVISLQSNAAHTAANQWLERSLDDSANRRLSL
                     PEGFLATDAILILLENIAAGLEVRETVVRRHVDEQMPFMATERWLMAGARAGGDRQAL
                     HEVIRRHSFAAAEATSRGEPNDLLERLAADRAFRKVPVERLRAELEPARYTGRAERQV
                     SEFLDEYLTPLLDRARTLARAADPMELFV"
     gene            complement(5776..7173)
                     /locus_tag="VGA78_00505"
     CDS             complement(5776..7173)
                     /locus_tag="VGA78_00505"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX9892363.1"
                     /translation="MFRASALLLVLLGAACRDTSSNSFTTPASAMQTQPERQSALTGS
                     RRTAIVEAVGRVAPSVVSIRAQVRRQVTEGPSFFDFFVPRQQVFESFGTGFVFRADGH
                     IITNQHVVASAQAVTVSLPDGTDLEARVVGEDPTTDIAVLKVERRDLPLPTLGQSRDL
                     MVGEWVVALGNPYTYLLGNAEPTVTAGVVSATGRNILPSRDQAGMYLDMIQTDAPINP
                     GNSGGPLANALGQVIGVNSSIFGRSGESIGLGFAIPIERALRVADEIIKSGSVRRAWT
                     GLEVAGAGNMREWKRSGGVQVTRVAPGGPAARAGIREGAVLVQANGRPLRNFLDWEAV
                     KLDLHVGDVIEFLQRDGSRTVARRVVTGDLPTVTAEKVNVLRGLELVTVTPAVRSERG
                     IQSEGGALVFRTTGEVTRATGLAEGDVIIGINRTRVTNAQQVASLLDAVRPRESFRIY
                     FERGGQVGYTDLAFR"
     gene            complement(7173..7955)
                     /gene="truA"
                     /locus_tag="VGA78_00510"
     CDS             complement(7173..7955)
                     /gene="truA"
                     /locus_tag="VGA78_00510"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEX9892364.1"
                     /translation="MDRTVCARLQYDGTDFVGWQVQPEARTVQGELEAVLGRLCGRPI
                     RVHAAGRTDAGVHALGMAVSAIVPARWTPDALRRALNALLPPDCWVLDVRETQPGFHA
                     RTSADERSYCYRIGTDPAAFSPFRRPFEWALGQELPFEVLARQAAQLVGPHDFRALAV
                     HTGERRNCRCTIRRSAWTGRDHGTGVEFHVTADRFLHHLVRILVATMVDAALGRRPED
                     HLARLLALDPDVRASPPAPPQGLYFMRAAYPDRWFRLDEDSP"
     gene            complement(8049..8660)
                     /gene="lexA"
                     /locus_tag="VGA78_00515"
     CDS             complement(8049..8660)
                     /gene="lexA"
                     /locus_tag="VGA78_00515"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX9892365.1"
                     /translation="MPLTKRQREILSYLESYIRERRYAPSFEEIAEHFQFASLATVHE
                     HLTNLERKGYIRRAYNESRSVEVLPPKGTSGASEIPLLGKVAAGTPIESLMQQETLTV
                     PDEMLPRRGGPNYALRVAGDSMIDEHITDGDYVVVHGRQSAENGEMVIALVNGSEATV
                     KKFYRESGGWIRLQPANTSMPPLRFQENEVLIQGVVVGVIRKY"
     gene            8824..10494
                     /locus_tag="VGA78_00520"
     CDS             8824..10494
                     /locus_tag="VGA78_00520"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9892366.1"
                     /translation="MSIDSEILPVAHVEELVRALVRALRAFQMYLPNNPMYQRAQHQL
                     EDAFPPIWSVLDEVTLLINETDLLWDEQVVYQQPSKSESFAWGLYKDGMRVLTLRKGA
                     EEEEITRFLQTVTRARHLAVDASDDLLTLLWEQDFHRVTYQFAEVISDPWVYDPQALD
                     LAAQGGAYTVSERIREEVAAARPEGLVDLDEFDSTLYFLEEVEVTALRREVEEEYARD
                     VRTAALSALFDTFELQSDPQVREEVLGVLDILFPNLLARGDFRTVAMVLREGRQVKAR
                     SQGLDGTLRVRLQGFEARLSEPETIGQLLQTLDEAATLPPEEDLGEVLRELHAPALGT
                     ILTQLPRLNSPEVRTIIGAAAERLAQANTGELQRLLRMLDEEALPGAVRLAGRLGLQA
                     AIPSMTPLVKHSATGVRMASVEVLGQLGTPGAMAGLEPAIDDVDRAVRMAAVAAVTRR
                     SYAGALRRLETAVQGKGLQRERAELRQLFEAYAVVAGQAALPTLRNIVAPRGLFQRKA
                     SPETRTCAVYALARLRTPDARALLEEAVADKELSVRHAATTLLREWPV"
     gene            10491..11939
                     /locus_tag="VGA78_00525"
     CDS             10491..11939
                     /locus_tag="VGA78_00525"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX9892367.1"
                     /translation="MIDPQPRHLADADDGFLRHAGREFLVHLYAALRSLRLYPIENDA
                     VQRSLDDLENSAGVLLSREANIEIRLSGDFLFVNGTRLRLELDNYASFSHVHNLLRTF
                     DIGSLLVQSGVERREWQAFLSILLSLTGTAVADDVFGTLVDRMDRAEITHLDVQQTRE
                     AEDERHAREMAKRTYSHSVAVTKEVVNSVRLGRTTNIKKAKRAVQMMVDQVLTNETSI
                     IGLTTLRDYDEYTFTHSVNVCIFAVALGRKMGLAKLQLYDLGLTALLHDIGKARIPIE
                     IMNKASGLTEDEWRLLQTHTWRGSLTLFGLRGYEETPYRSILVAHEHHMKTDLTGYPK
                     HVRQRTLGIFSRLVAVADGFDAATSRRAYQTVPIEPDEVLREMWENPRRGYDPMIVKA
                     LINLIGIYPVGTCVILDSFEVGVVAAPNPDPQFLNRPLVTLVTDPNGAIIPPPGTPVN
                     LGDRTERGAFERSIVKVTNAERFGIDIGSYFV"
     gene            11941..14022
                     /locus_tag="VGA78_00530"
     CDS             11941..14022
                     /locus_tag="VGA78_00530"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX9892368.1"
                     /translation="MRAPGAELQRLLQLWARILILGGLGVLVALLAIDPRWSTQPVTL
                     GALTVAVAALRSAPVRLSKYSYLTQTGLPGLVGLAIAAPSTAVLAVALGVAASDMLVL
                     RKSVIAGLVNTGREVIALTSAAGFYALSLSLVGVKQLSLDFMPAAAVLTGSYFLVSRA
                     LFYFSLLVRAKLPLSERLFILRWEVVGFLVTCIGAAVVVWSLQTLSPPGWLAILVTLA
                     VIGLFARTLIDEAIAAEDLNKVHLMQSVVTANVSLQTAFEQIEQFAYRLIDWDDLRVY
                     RIERGTPELAYHGRIGRPGRGEPDASLEPPRAEVVREGRIVVLGDARREAGTRDTKVV
                     SVAIQPLKFADEVIGTLEIFHRKERFYRSRDVAALTAIAAQISTAIHISELRRPLLLT
                     VDQIDGQIKSLARAADSLRSSARALAAASEALRQRTMVQEDFARQGLETTTSLAGISA
                     ATAGSGARAAKVSQEAASAAARHRIAINDAIQRLVQVQGFVTDSTGQVTALGEAADRL
                     TRFFESIREIAETTNLIALNATIEAARAGTEGRGFGVVADEIRRLATQTDRTARDAAL
                     LASEIGTEVDGILAHMRLGRTMVAGVEDVSGEAVQALEAIVAATRQAGDDARAIAESA
                     AAQEQASQRLAGQIRQVADSSRQTRGEVELLASQAVTASRSQAELEQAIALLEQIVVD
                     LQRIARHFVVG"
     gene            14025..14570
                     /locus_tag="VGA78_00535"
     CDS             14025..14570
                     /locus_tag="VGA78_00535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892369.1"
                     /translation="MPGLPPWAQVTPARLAHIERVVGLLDGWADALHLAEPERDRWLR
                     AAWLHDALRDAPEAELRRLAPDEPGPTELLHGPAASVRAAADGEQDPGILGAVHWHSV
                     GSAHWDRVGQALYCADFLEPGRSFDREARAELVTRFPEAPKEVLREVAGRRVAWLVGS
                     GWFIPETTWRFWNHAAGGWPG"
     gene            14567..14953
                     /locus_tag="VGA78_00540"
     CDS             14567..14953
                     /locus_tag="VGA78_00540"
                     /inference="COORDINATES: protein motif:HMM:NF024791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytR C-terminal domain-containing protein"
                     /protein_id="HEX9892370.1"
                     /translation="MRFAWWVGLVWCAGCNKPDPAARPSIGLDAKDGRLMAEVLNGSN
                     RAGYARLGTLALRDAGIDVVSYGTAEVLTDTTLILVRRGRADRGRLVARALGVGTVRV
                     AIDTLRRVDVTVILGKDWVPPAKLRP"
     gene            complement(15123..>16110)
                     /locus_tag="VGA78_00545"
     CDS             complement(15123..>16110)
                     /locus_tag="VGA78_00545"
                     /inference="COORDINATES: protein motif:HMM:NF025042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4147 domain-containing protein"
                     /protein_id="HEX9892371.1"
                     /translation="AAAADSIGSFCRATPPGSTVWFLLSGGATSLMAGPETGLTVDDL
                     RRTYDQLLRSGLDIRAMNLVRKRLSRWGGGKLAMALSHTRVLQYTISDVVGDALDAIG
                     SGPAVPDTGSAGEAVTLIDQAGLRAEIPAAAMRRLDDMAAGKLPDLPPARSPAFAQVT
                     TAIVASNRTAIQAVADLARERGWEVEDEAQPLRGEAAEAGAELAQRLLAEPGRRMLLA
                     GGETTVRVSQATGQGGRSQELALAAARILARSKSAVALLAAGTDGRDGPTDAAGGLVD
                     QETWRRIKTAGIDPAVALANHNAYPALAAAGDLLRTGPTGTNVMDLVIAATQ"
BASE COUNT         2568 a         5440 c         5610 g         2492 t
ORIGIN      
        1 ggcgccgtga atgccatcgc ggccggtccg cgcgccgacg gcgaggagca ggttgccgac
       61 cccgcgggcc cgggcccgga tcaggtcgcg ctccttgagc aggccgacgc acatggcgtt
      121 caccagcgga ttgccgctgt aacacggggc gaaatacacc tcgccggcca gggtgggcac
      181 tccgacgcaa ttgccgtagt ccccgactcc tttgacgatg ccggcgaaga ggtagcgatt
      241 gcgggggtca tccagggggc ccagccggag gctgttgagc accgccacgg gacgggcccc
      301 catggtgaag acatcgcgga ggatccctcc caccccggtg gccgcaccct ggtacggctc
      361 gacggccgag gggtggttgt gggactcgat cttgaaggca accgcccacc cgttaggcag
      421 gcgcagcacc ccggcgtttt cgcccggccc ctgcaccacc tgcggtccgg tggtgggaaa
      481 ggtgcgcagc accggtcggg aatgcttgta gctgcagtgc tccgaccaga gggcggagaa
      541 cacgcccagc tcggtcaggg tgggggtccg gcccaggatg ccacagatgg cgtcgtattc
      601 cttcggggtg aggttgtgct cccgggccaa agcgggcgtc accgccggct cgcccgaacg
      661 cggttccgcg gtgggcaccg ccaccgatgt cacgcgctgt ccctcttccc gcgccgcatc
      721 ccggtcacca cgtcgccgaa gactttccgg aacaatcccg gctcctcgtg cttgagcagc
      781 gtgtccagct cacccgaatc gagccacatg ccaccgcact ccgggcaggt gtcgacctgg
      841 acgccgtgga tgactgtggt aatcaggtcg tggccggtct tggggcactt catgtagtgg
      901 gaacggcgtt ccacgtcgtc gcgctggagg cgctcccgct cccgggtctt ggccagcagt
      961 tcggcatcga gcttggcgaa gtactcgtcc tcgttcttgc tgggcttctt ggggtcgctc
     1021 atcggaggtc ctcgtaacgg ctggtcattg ggccggggcc aggctggata ccatggagtg
     1081 gaagacgcca agccccacat cggaatcgag attgggatcg gccagccgct cggggtgggg
     1141 catcatcccc atgacgttgc cggccggatt gcagatggcg gcgatgtcgt cggtggcctc
     1201 attgggattg gccggtgcgt cgagcatgac gcccgagtgg tagcggagca ccaccaaccc
     1261 gtcggcctgg agcatgtcga gcacttcggg cggggctacg tagcgaccat cgccgtggcc
     1321 gaccggaatg cggatcacct gcccttcgtg gtactcgcgg gtgaagacgg tgtcgttccg
     1381 ttcgatccgc acgtccaccg gccgggacag gtagtgcagc cccccgttcc gtaccagcgc
     1441 cccgggcagg agccccgcct cgcagagaat ctgaaagccg ttgcagatcc ccagcacggc
     1501 tccgccggcc tccgcgtgac gggtgaccgc ggtcatcacc gggctgaagc gggcgatggc
     1561 gccggtgcgg aggtaatcgc cgtaactgaa cccgcccggc agaatcacca cgtcggcgcc
     1621 cttgaggtcg gtgtcgcgat gccagatcga gacggtcccg gccccggccc gttcggcggc
     1681 gcggaaggtc tccgcctcgc agttgcttcc ggggaaggac acgacgccca cggtcaccat
     1741 caggccgtca cctcgatggt gaagtcctcg gtcaccggat tggccagcag ccgctcgcac
     1801 atggcgcggg cccggtcgcg ggcatcggcc tcgtctcgcc cttcgaggtc gagcgcgatg
     1861 gccttgccca gatggacgtt ggatgcgccg ccgaagccga gcgacgccag cgcatgttcc
     1921 accgcctggc cggcgggatc gagcaggccg acccgaggca tgacccgcac gtgcacctgg
     1981 taggtcttca ctgatgggtt ccctctctgg gttcgccgct gccgcccccg cgcagtcgga
     2041 agcggtccgg ccgatcgaac aggctgaaga ccacgaatcg caggatcccg aacaccgcgt
     2101 agccgagcag gaacgggaac aggaacgagg acgggaccag aatggcgccg cccacgatca
     2161 ccacgtgcag caccagcgcg aagatgccgc cggcggtgcg gaacccgacc cggggccact
     2221 tgggatactt gacaccgctc accatgagga ccgacaacag gatcatcagc agcaccagct
     2281 cctgatgctc cagctcgagc caggcgagtg cggtgcggga gacgctggtc tggctgaagg
     2341 ggtaccaggt agccagggcc agtccggcgg ccggggaggg caggccggtg aaccacccgg
     2401 tgggcgtgct gcccaccatg acgttgaagc gggccagccg gagcgaggtc gccaccacgt
     2461 agatgtagca gaccacccag gcgaaccggc cggccgactg gaattcgagg aagtacatga
     2521 tcatggccgg ggccacgccg aacgacacga tgtccaccag cgagtcgagc tcggcgccga
     2581 agcgactgtt ggtcttggag agccgagcga cccgcccgtc gagcgtgtcg agcactccgg
     2641 cgaagaccac gaaccagccg gcccagagaa agttcccgcg gctcgcggac acgatggccc
     2701 agatgccgaa gaagagattc cccagggtaa acgcactggg cgcgacgaac acgacgcggc
     2761 ggacggcgcg cccccgcggg ggaggcgtcg gcactgtcat ggccactccg cgatgacggt
     2821 caatcccgcc cgggtcacgt cgcccggttt ggccttcacc cgggcggccg gcggcaggaa
     2881 caggtccacc cgagagccga agcgaatgag tcccaaccgt tctccctgac ggacccggtc
     2941 accgctgtcc ggatcggtca cgatccggcg cgccaccagg ccggcgatct ggcgcaccag
     3001 gatcttgccg tagtcggtgc gaatgccgag gctggcctgt tcgttctcgg cgctggcttt
     3061 ctcgccggcc gcgttgatga acttgccgcg gacgtaggcc cggtactcca cgaccccgtc
     3121 gactggatgc cggttaacgt ggacatcgaa cacgttcatg aaaatcgaga cccgggtgga
     3181 cgcccccgcc aggtaggccg gctcctcgat cgggatcacg ctcactactt tgccgtcggc
     3241 cggggccagc accagctttt cgccccgcgg cccccgccgt actggatcgc ggaagaaggc
     3301 gatcacccag agggtgagca ccagccagag gccgaacggc agccacagcc ggaacagcgc
     3361 caggagcatc gcgaccacca ccgcgatgcc gatgaagggc cacccttcgg gagcaatgcg
     3421 catcagccgg cccggagctc atgcccggtg agccgccgat aggcctcgcg gtagcgccgg
     3481 ctggtggcgg tgacgacttc ctcgggcagc cggggtggag gcgcctcacc attccactgc
     3541 ccggcgtccc ggagcccggc cagatagtcc cgaagcggct gcttgtcgaa gcttgcctgc
     3601 gagcggcccg gctggtaggc atcggccggc cagaagcggg aggaatcggg tgtcagcacc
     3661 tcgtcgatga gccggagggt cccctcgctg tcgaccccga actcgaactt ggtgtcggcc
     3721 acgatgatcc cgcgggtctc ggcgtaatcg cgtcccgcgg cgtagatcgc caggctcaga
     3781 tcgcgcaggc gagcggccag ctcgacgccc atatcccgca ccagccgcgc gaaggtcacg
     3841 ttctcgtcgt gtcccgattc tgccttgatg gcgggggaat agagcggcgg ctcgagccgg
     3901 gacgactcct ccaggccggg cgcaatcggc tcaccggcca gggtaccgct ggtccggtac
     3961 tccgaccacg cgctcccggc caggtatccc cgcacgacac actcgaacgg caccggcatg
     4021 gtacggcggc agagcatggc gcggccggcg agctggtccc gatacggggc cagggcgggg
     4081 accgcggtca cgatggtgcc ggcatccgcc gtgagacaat gatgggggac cagactctcg
     4141 acccgggcga accagaaggc ggagatctgg gtgagcaccg cgcccttcga cggcaccggc
     4201 tctcgcatca cgatgtcgaa ggcgctgacc cggtcgctgg cgaccagcag gagcctggtg
     4261 tcatcgacct cgtacacttc gcggacctta cctcgccgga gcagcggaag cggcagggag
     4321 ctggcggtga gcgtggtggt catacgaaga gctccatcgg gtcggctgcc cgcgccaggg
     4381 tccgggcgcg atcgagcagc ggggtgaggt attcgtcgag gaactcgctt acctgccgct
     4441 cggcgcggcc ggtatagcgc gccggttcca gttcggcgcg gagccgctcg accggcacct
     4501 tccggaacgc ccgatcggcg gccagccgct ccagcaggtc attgggctcg ccccggctgg
     4561 tggcctccgc ggccgcgaag ctgtgacgcc ggatcacttc gtgcagcgcc tggcggtcgc
     4621 cgccggcccg cgcaccggcc atcagccagc gctcggtggc catgaagggc atctgctcgt
     4681 ccacgtggcg ccggacgacc gtctcccgga cttccaggcc ggccgcgatg ttctcgagca
     4741 gaatcagaat ggcatcggtc gccagaaacc cttcgggcaa cgacagccgg cggttggcgg
     4801 agtcgtcgag actgcgctcg agccactgat tggcggcggt gtgggcggcg ttggactgga
     4861 gcgagatgac gaaccgggcc agggcgccga tccgctcggc ccgcatcggg ttgcgcttgt
     4921 aggccatggc gctggagccg atctgctccg cttcgaacgg ctccagcagc tcgccctcgt
     4981 gctgcaacag ccggagatcg accgccatct tggcggccga ttgcgcgata ccgctcaggg
     5041 tgtcgaggac cacgctgtcg gacttgcgag gataggtctg gccgctcacc gcgaacgcct
     5101 cgtcgaatcc catccgccgg gtgatgcggc ggtcgagctc ccggaccttt tcgtgatccc
     5161 cgccgaagag atccaggaac gaggcctggg tcccggtggt gcccttgcac ccgtggaacc
     5221 ggagggccgg gagcagctgg ctcaaggcct cgctgtcgag ggcgaggtcc tgggcccaga
     5281 gacaggcccg tttgccgacc gtggtcagct gcgccggctg gaagtgggtg taggccaggc
     5341 aaggcagacc ggcgtagcgg cgcgcgaacc cggccagggc atcgcccacc gcgatcagcc
     5401 ggcccagcaa cagccgcagg ctctcgcgga tcaccaggag atcggcgttg tcggtgacga
     5461 aggcgctggt ggcgccgagg tggatgaagc tccgcgctgc gggggcctgg tcgccgtagg
     5521 catacacgtg ggccatcacg tcgtgccgga aacgtttttc gtagccggcc gcggccgtca
     5581 ggtcggcgtc atccaggtgg gcccgcattt ccgccaaggc tgcgtcgggg atctcgagcc
     5641 ccaactcgcg ctcggtctcg gccagcgcca gccagagacg gcgccagagg gcgacccgat
     5701 gagccggtcc ccacaatcgc tgcatcgcgg gggaggcgta ccgttgcccc agaggggatt
     5761 gatagcgctc gtcggtcatc ggaaggcgag gtcggtataa cccacttgtc cgccccgctc
     5821 gaagtaaatg cggaaggatt cccgcggtct caccgcgtcg agcaggctcg cgacctgctg
     5881 tgcgttggtg acgcgggtgc ggttgatgcc gatgatcacg tccccctcgg ccagcccggt
     5941 ggcgcgggtg acttcgccgg tggtccggaa gaccagcgcg ccgccttccg actgaatccc
     6001 gcgctcgctc cgcaccgccg gggtcaccgt caccagctcg agaccgcgga gcacgttcac
     6061 cttctcggcc gtcacggtgg ggagatcccc ggtgaccacc cggcgggcca cggtgcggct
     6121 gccgtcccgt tggaggaact cgatcacgtc gcccacatgg agatcgagct tcaccgcttc
     6181 ccagtcgagg aagttgcgca gcggccggcc gttggcctgg accagcacgg cgccttcccg
     6241 gatcccggcg cgggccgcgg gaccgccggg ggccacccgg gtgacctgca ccccgccgga
     6301 gcgtttccac tcccgcatgt tgccggcccc ggcgacctcc agcccggtcc aggcccgccg
     6361 cacgctgccg ctcttgatga tctcgtccgc gacccgcaac gcccgctcga tgggaatggc
     6421 gaagcccagc ccgatggact cgccgctccg gccgaaaatc gacgagttga ccccgatgac
     6481 ctgccccagc gcgttggcca gcggcccgcc cgagttgccg ggattgatgg gcgcgtcggt
     6541 ctggatcatg tcgaggtaca tgccggcctg atcgcgcgag ggcaggatgt tccgcccggt
     6601 ggcactcacc acaccggcgg tgacggtcgg ttcggcgttg cctaacaggt aggtgtaggg
     6661 attgccgagg gccaccaccc actcacccac catcaggtcg cggctctgcc cgagggtcgg
     6721 cagcggcaga tcgcggcgtt cgaccttgag gaccgcgatg tccgtggtgg gatcctcgcc
     6781 caccacccgg gcctcgagat cggttccgtc ggggagcgac acggtgacgg cctgggcgct
     6841 ggcgaccacg tgctggttgg tgatgatgtg gccgtccgcc cggaacacga acccggtgcc
     6901 gaacgactcg aacacctgct gccgagggac gaagaaatcg aagaaactgg gcccttcggt
     6961 gacttgacgt cgcacctgag cccggatcga cacgaccgaa ggggcgaccc gcccaaccgc
     7021 ctccacgatg gcggtgcggc gcgagccggt gagggcgctc tggcgctccg gctgcgtctg
     7081 catggcggat gcaggggtgg tgaacgagtt ggaagaggtg tcgcggcacg cggcgcccag
     7141 gagcacgagc agcagggcgg aggcgcggaa catcatgggg agtcctcgtc caggcgaaac
     7201 caacggtccg ggtatgccgc gcgcatgaaa tagagacctt ggggcggcgc cggcggactg
     7261 gcgcggacat ccgggtcgag cgccagaagt cgcgcgagat gatcctcggg ccggcggccg
     7321 agcgcagcat ctaccatcgt ggcgaccaga atccgcacca gatggtgcag gaaacggtcg
     7381 gcggtcacgt ggaattcgac gccggtcccg tgatcccgtc cggtccacgc cgagcgccgg
     7441 atcgtgcagc ggcagttacg ccgctcgccg gtgtggaccg cgagggccct gaagtcgtgc
     7501 ggccccacca gctgcgccgc ctgccgggcc agcacctcga acggcagctc ctggccgagg
     7561 gcccattcga acggccgtcg gaagggcgaa aaggcggccg gatcggtccc gatgcggtaa
     7621 caataggacc gctcatcagc cgacgtccgg gcgtggaagc cgggttgcgt ttcgcgcacg
     7681 tcgagcaccc agcaatcggg cggcagcagc gcgttcaagg ctcgccggag cgcgtccggg
     7741 gtccagcgtg ctggcacgat ggcgctgacc gccatcccga gcgcgtggac cccggcatcg
     7801 gtacgacccg ccgcgtgaac ccggatgggg cggccgcaga ggcgccccag caccgcctcc
     7861 agctcgccct gaacggtccg cgcttcgggc tgcacctgcc agccgacgaa gtctgtgccg
     7921 tcgtactgga ggcgggcgca taccgtccgg tccatcgcgg gcgaaatgta agtcgataca
     7981 gcggactgtt gtagggttcg cgccgatggg tgtgctaggg tcggaagcgt cggaaaggtc
     8041 gaatgccgct agtatttccg gatcactcct acgacgacgc cctggatcag gacctcgttc
     8101 tcttgaaacc ggagcggcgg catggaggtg ttggccggtt ggaggcggat ccagccgccg
     8161 gattcgcgat agaacttctt gaccgttgcc tcggagccgt tcaccagcgc aatgaccatc
     8221 tcgccgttct cggcggactg ccgaccgtgc accacgacat agtcgccatc ggtgatgtgt
     8281 tcgtcgatca tggaatcgcc cgccacccgc agcgcgtagt tgggaccgcc ccggcgcggg
     8341 agcatttcat cgggtaccgt gagggtttcc tgctgcatca gcgattcgat cggggtgccg
     8401 gccgccacct tgccaagcaa gggaatttcg ctggcaccgg atgtgccctt ggggggaagc
     8461 acctcgaccg acctgctctc gttgtaggcc cgccggatgt agccctttcg ttccaggttg
     8521 gtcaggtgct cgtgcaccgt ggcgagtgag gcgaattgaa agtgctccgc gatttcttcg
     8581 aagctgggag cgtaacgccg ctcccggatg taggactcga ggtaactcag gatttcgcgc
     8641 tggcgtttgg tcagtggcat ggggttccgg gtggccgaag agagcccgaa caagcttacc
     8701 cgaagacagc ccgaaacgca agccactcgt tccgtgcgcg gggttgggga cgggtattag
     8761 ctttttgcat cccaacgata tgacacgcga ctccagcgcc tgtccgatgt ccgggcacac
     8821 ccgatgagca tcgactccga gatcctccct gtcgcccatg tcgaggaact cgtgagggcc
     8881 ctggtccggg cgctgcgtgc cttccagatg tacctcccca acaatcccat gtaccagcgg
     8941 gcccagcacc agctggagga cgcgttcccc cctatctggt ccgtgctgga tgaggtgacg
     9001 ctgctcatca acgagaccga cctgctgtgg gacgagcagg tggtttacca gcagccgagc
     9061 aagagcgaat cgttcgcttg ggggttgtac aaggatggga tgcgcgtgct cacattgcgc
     9121 aagggggcgg aagaagagga gatcacccgc tttctccaga cggtgacgcg ggcccgacat
     9181 ctcgcggtcg acgccagcga cgatctactg accctgctgt gggagcagga tttccatcgg
     9241 gtcacctacc agttcgccga agtgatctcc gacccctggg tgtacgatcc ccaggcgctg
     9301 gacctggcgg cgcagggcgg agcgtacacg gtgtcggagc ggatccggga agaggtggcc
     9361 gcggcgaggc ccgaggggtt ggtcgacctc gacgagttcg actcgaccct ctatttcctg
     9421 gaagaggtcg aggtcaccgc attgcggcgc gaggtggagg aggagtacgc ccgtgacgtc
     9481 cggaccgcgg cgctctccgc cctgttcgac acgttcgagc tccagagcga tccgcaggtc
     9541 cgcgaagagg tcctcggcgt gctcgacatt ctgttcccta acctgctggc gcggggcgac
     9601 ttccgcacgg tggcgatggt gctgcgggaa gggcgtcagg tcaaagcccg ctcccaggga
     9661 ctggacggga ctctgcgggt tcggctgcaa ggattcgaag cccggctgag cgagcccgag
     9721 actatcgggc aactgctcca gaccctggac gaagcggcga ccctgccgcc ggaggaggat
     9781 ctgggcgagg tgctgcgcga gctgcatgcg cccgcgctgg gtaccattct cacccagctg
     9841 ccccgcctca actcgcccga agtgcgcacc atcattggcg cagcggcgga gcggctggcc
     9901 caggccaaca ctggggagct gcaacggcta ctccggatgc tggacgagga ggcgctgccc
     9961 ggggcggtgc gtctggccgg gcggctggga ctgcaggccg caatcccgag catgacaccg
    10021 ctggtcaagc attcggccac cggggtgcgc atggcctcgg tggaggtgct ggggcagctg
    10081 ggaactccgg gcgcgatggc tgggctggag cccgccatcg acgatgtgga ccgcgcggtg
    10141 cggatggccg cggtggccgc ggtcactcgg cggagctacg cgggtgcgtt gcggcggctg
    10201 gaaacggcag tacaggggaa ggggctccag cgcgaacggg ccgagctgcg ccagctgttc
    10261 gaggcctacg ccgtcgtggc ggggcaggcc gcgctgccca cgctccggaa catcgtggcg
    10321 ccccggggac tgtttcagcg caaggcgtcc cccgagactc ggacctgcgc ggtctatgcc
    10381 ctggcccgac tccggacccc cgacgcccgc gccttgctgg aggaagcggt cgccgacaag
    10441 gagctgtcgg tgcgccacgc cgcgaccacc ttgctgcgtg aatggccggt atgatcgacc
    10501 cccaaccgcg ccacctggcc gacgccgacg acggcttcct gcgccacgcg gggcgtgagt
    10561 tcctggtcca cctctacgcc gcgctgcgga gcctgcggtt gtatccgatc gaaaacgatg
    10621 cggtgcagcg ctcgctcgat gatctggaga actcggccgg ggtgctgctc tcgcgggaag
    10681 ccaacatcga gatccggctc tcgggtgatt tcctcttcgt gaacgggacc cggctccggc
    10741 tggagctcga caactacgcc tccttctccc acgttcacaa tctcctccgc accttcgaca
    10801 tcggcagcct gctggtccaa tcgggagtgg aacggcggga gtggcaggcc ttcctcagca
    10861 tcctgctcag tctcaccggc accgcggtgg ccgacgatgt cttcggcacc ctggtcgacc
    10921 ggatggaccg agccgaaatc actcatctgg atgtgcagca gacccgggag gccgaggacg
    10981 agcggcacgc ccgcgagatg gccaagcgga cctattccca cagcgtggca gtgaccaagg
    11041 aagtggtgaa ctcggtccgg ctgggccgca ccaccaacat caagaaggcc aagcgagcgg
    11101 tgcagatgat ggtggaccag gtcctcacca acgagacctc gatcatcggc ctcaccacgc
    11161 tgcgggacta cgacgagtac accttcaccc attcggtcaa tgtttgcatc ttcgccgtgg
    11221 cgctggggcg caagatgggg ctggccaagc tgcagctgta cgatctaggc ctgaccgccc
    11281 tgctgcacga catcggcaag gcgcggatcc cgatcgagat catgaacaag gccagcgggc
    11341 tcaccgaaga tgaatggcgg ctgctgcaga cccacacctg gcggggatcg ctcaccctgt
    11401 tcggactgcg gggctacgaa gaaaccccct accgctccat cctggtggcc cacgagcacc
    11461 acatgaagac cgacctcacc gggtacccca agcacgtgcg gcagcggacc ctcggaatct
    11521 tctcccgcct ggtggcggtg gccgacggat tcgacgccgc caccagccgg cgggcgtacc
    11581 agaccgtgcc gatcgaaccc gacgaggtgt tgcgggagat gtgggaaaac ccccgccgcg
    11641 gctacgatcc catgatcgtg aaggccctca tcaatctgat cgggatctac ccggtgggga
    11701 cctgcgtcat cctggacagc ttcgaggtgg gcgtggtggc cgcgcccaat cccgatcctc
    11761 agttcctcaa tcgccccctg gtcaccctgg tgacggaccc caacggagcg atcattccgc
    11821 ctccggggac tcccgtgaat ctgggggacc ggaccgagcg gggcgcgttc gagcggtcca
    11881 tcgtgaaggt gaccaacgcc gagcggtttg gaatcgacat tggctcgtac ttcgtctgac
    11941 gtgagggcgc cgggggcgga gctccagcgc ctgctccagc tctgggccag gatcctcatt
    12001 ctgggcgggc tcggcgtgct ggtcgccctg ctggcgatcg atcctcgctg gtccacccag
    12061 ccggtaactc tgggcgcgct caccgtagcg gtcgcggccc tccggtcggc gcctgtccgg
    12121 ctcagcaagt actcctacct cacccagacc gggctgcccg ggctggtggg actggccatc
    12181 gccgcgccct ccaccgcggt gctggcggtg gcactggggg ttgccgcctc cgacatgctg
    12241 gtgctgcgca agtcggtgat cgccgggctg gtgaacaccg gacgcgaagt catcgctctg
    12301 accagcgccg ccggtttcta tgcgttgagc ctttcgctgg tcggcgtcaa acagctctcg
    12361 ctcgacttca tgcccgcggc cgcggtcctg accggctcct acttcctggt gtcgcgggcg
    12421 ctgttttact tcagtctgtt ggtgcgggcc aagcttccgc tgtcggagcg gcttttcatt
    12481 ttgcggtggg aggtggtcgg cttcctggtg acctgcatcg gggctgcggt ggtggtgtgg
    12541 agtctccaga cgctctcgcc cccgggctgg ctcgcgatcc tggtcacgct cgccgtcatc
    12601 gggctcttcg cccggaccct tatcgacgaa gcgatcgcgg ccgaggatct caacaaagtt
    12661 cacctgatgc agagcgtggt caccgccaac gtcagccttc agaccgcgtt cgagcagatc
    12721 gagcagttcg cctaccggct gatcgactgg gacgatctgc gcgtctatcg gatcgagcgc
    12781 ggcacgccgg agctggccta tcacggccgg atcgggcggc ccggccgggg cgagccggac
    12841 gcgtcgctcg agccgccccg cgccgaggtg gtgcgggaag ggcgcatcgt ggtgctgggg
    12901 gatgcgcggc gcgaggccgg cacccgcgat accaaggtgg tgagcgtcgc gatccaaccg
    12961 ctcaaattcg ccgacgaggt gatcggcacg ctggagattt ttcaccgcaa ggaacggttc
    13021 tatcggtccc gcgacgtggc ggcactcacc gccatcgcgg cccagatctc gactgcgatc
    13081 cacatctccg aactgcggcg gccgctgctc ctgaccgtgg accagatcga cgggcagatc
    13141 aagtcgctgg cccgggccgc ggattcgttg cgctcttcgg cccgggctct cgccgccgcc
    13201 tcggaggccc tgcggcagcg caccatggtg caggaggact tcgcccggca gggtctggaa
    13261 accaccacct cactggcggg tatttcggcc gcgacggcgg gcagcggcgc acgggccgcc
    13321 aaggtcagcc aggaagccgc atccgccgcg gcccgccacc ggatcgccat caatgatgcc
    13381 atccagcggc tggtgcaggt gcagggtttc gtgaccgaca gcacggggca ggtcaccgcg
    13441 ctgggcgaag ccgccgaccg gctcacccgc tttttcgagt cgatccggga gatcgccgag
    13501 accaccaacc tcatcgcgct caacgccact atcgaggcgg cgcgggccgg gactgaaggc
    13561 cgcggctttg gcgtggtagc cgacgaaatc cggcggctcg ccacccagac cgatcggacc
    13621 gcccgggacg ccgcgctgct ggcctccgag atcggcaccg aagtcgacgg catcctggcc
    13681 cacatgcggc tgggccgcac catggtggcg ggcgtcgaag acgtcagcgg cgaagcggtg
    13741 caggcgctgg aggcgatcgt cgcggccacc cggcaggcgg gagacgacgc ccgcgccatc
    13801 gccgaatcgg ccgcggcgca ggagcaggcc agccagcgcc tcgccggcca gatccgccag
    13861 gtggcggact cttcccgtca aacccggggc gaggtcgagc tgctcgcgtc gcaggccgtc
    13921 accgcctccc gcagccaggc ggagctcgag caggccatcg cgctgctgga acagatcgtg
    13981 gtcgacctgc agcgcatcgc ccgtcacttc gtcgtcggct gatcatgcct ggtcttcctc
    14041 cgtgggcgca ggtgacgccc gcgcggctgg ctcatatcga acgcgtggtc gggctgctcg
    14101 acgggtgggc cgacgccctg cacctcgccg agcccgaacg agaccggtgg ctccgggccg
    14161 cctggctgca cgatgccttg cgggacgcgc cggaagccga gttgcggcgg ctggcgccgg
    14221 atgagccggg tccgaccgag ctgctgcacg gccccgccgc ctcggtccgc gcggcggccg
    14281 acggcgagca ggatcccggg attctcgggg cggtacactg gcactcggtc gggtcggcgc
    14341 actgggatcg ggtgggccag gcgctctact gcgccgattt tctcgagccg ggccgttcgt
    14401 tcgaccggga ggcccgggcc gagctggtca cccgtttccc cgaggcgccc aaggaggtcc
    14461 tgcgggaagt cgccggccgc cgggtcgcgt ggctggtcgg ttcgggctgg ttcatcccgg
    14521 aaaccacctg gcggttctgg aaccatgccg cgggtggatg gccggggtga gattcgcgtg
    14581 gtgggtgggg ctggtgtggt gtgcggggtg taacaagccg gatccggcgg cgcggccttc
    14641 gatcggactg gacgcgaagg acggtcgtct gatggccgaa gtgctgaacg ggagcaatcg
    14701 ggccgggtac gcccgcctgg ggacgctcgc cctgcgggac gccggcatcg acgtggtgag
    14761 ctacggaacc gccgaggtcc tgaccgacac cacgctgatt cttgtcaggc ggggccgggc
    14821 cgatcggggc cggctggtgg cgcgcgccct gggcgtcgga acggtccggg tggcgatcga
    14881 caccctgcgc cgggtcgacg tgacggtgat tctggggaag gactgggtcc cgccggcgaa
    14941 gttgcgaccg tgacctctaa acacaggaag caggaagcag ggagcaggga gcaggaagca
    15001 gggagcaggg agcaggaagc agggagcagg aagtaggaag caggacccgc tgtccagctc
    15061 ccctctcctc cactccccgc tccctgctcc ctgctccctg cttcctgctt cctgctccct
    15121 gcctattgtg tggcagctat gaccaggtcc atcacattgg tcccggtcgg cccggtgcgg
    15181 agcaggtcgc cggccgccgc cagcgcggga taggcgttgt ggttggccag ggcgacggcc
    15241 ggatcgatgc ccgccgtctt gatccgccgc caggtctcct gatcgaccag ccctcccgcc
    15301 gcatcggtcg gtccatcgcg tccatcggtc ccggcagcca ggagtgcgac cgcggacttt
    15361 gagcgcgcca gaatccgggc cgccgccagc gccagctcct gactccgccc cccctggccg
    15421 gtcgcctgcg atacccgcac cgtcgtctcc cctcccgcca acaacattcg acgtcccggc
    15481 tcggccagca ggcgctgggc cagctccgca cccgcctccg cggcctcgcc gcggagcggc
    15541 tgcgcttcat cctcgacttc ccagccgcgt tctcgcgcca gatccgcgac cgcctggatc
    15601 gcggtgcgat tcgacgcgac gatcgccgtg gtcacctggg cgaacgccgg cgaacgagcc
    15661 ggaggcaagt cgggcagctt gcccgccgcc atgtcgtcga gtcgacgcat cgcggctgcc
    15721 ggaatctccg cccggagccc ggcctggtcg atcagcgtca cggcctctcc agcgctcccg
    15781 gtatcaggca cggcgggccc cgatccgatg gcatcgaggg catcacccac cacgtcggag
    15841 atggtgtact ggagtacccg cgtgtgcgac agcgccatgg cgagcttgcc gccgccccac
    15901 cgcgagagcc gcttccgcac caggttcatc gcccggatgt cgaggcccga gcgcagcaac
    15961 tggtcgtagg tgcgacgcag gtcatccacc gtgaggccgg tctcggggcc tgccatcagg
    16021 ctggtggcgc cccccgacaa cagaaaccag acggtggagc cgggaggggt ggcacggcag
    16081 aacgagccga tggagtcggc ggcggcggcg
//
LOCUS       DASWKS010000013         3046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1484451, whole genome shotgun sequence.
ACCESSION   DASWKS010000013 DASWKS010000000
VERSION     DASWKS010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484451"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..1333
                     /locus_tag="VGA78_00550"
     CDS             290..1333
                     /locus_tag="VGA78_00550"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HEX9892372.1"
                     /translation="MSDPVSRRTFLGAAAALAAGAVPAGAEPRSVAPFVPRPRQARIA
                     AVSSSNGLRAVNRAVELMTQGMDPLDAGVEGVKIQELDPEDMSVGYGGLPNEEGVVQL
                     DASCMHGPSRRAGAVAALEGIKTPSEVARLVLRYTSHILLVGAGAKRFALSYGFKEED
                     LLTPKSREAWLRWRANRGKEDDWIDIPQGEPLAARPTGTINLNLINEKGEISSVTTTS
                     GLAWKIPGRAGDSPIIGAGQYTDNEIGAAGSTGRGESNIMVCGGFLTVENMRRGMSPT
                     DACLETLRRVVELTPPPLIDEQGRPRFGLVFYALNKKGEIGAGSLFPARYAVHDGSKG
                     ELRDAAFLYQPRR"
     gene            1333..2487
                     /locus_tag="VGA78_00555"
     CDS             1333..2487
                     /locus_tag="VGA78_00555"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9892373.1"
                     /translation="MRLSTWATGLVLCATPLAAQEPWGASYYPYFLKGPNDQLSVVLH
                     YQYGQPADYFDRVPFAQSLSLEGGINASGSRFLIGHLKFPRLAPGWRLYGAAGAVREN
                     RFGYFGRGNDTEETEDPPAENTWVNRMRRSRYFGRVELTRQLVGPLHLSLGGSITDAR
                     FATLPGGSRFLDDHFIQVPCLPGEPCPQPPGDPSDVDVLGQVRLILDVRDNEFVASRG
                     VFVEAGLETGSGGEGYSGAFVFATGSIPPWEGAVLASRVLVRSIESGAPLDARYTLHA
                     WERSIPLLGGPESHRAFVYGRYTGRQVVVGSLEFRQDILNFGDYGAFTGIGFIDAGMV
                     QEVKAAESNTLHVGGGVGLAMRILRSTVLQFTFAVGGDGFQFSMGSGWSF"
     gene            complement(2511..>3046)
                     /locus_tag="VGA78_00560"
     CDS             complement(2511..>3046)
                     /locus_tag="VGA78_00560"
                     /inference="COORDINATES: protein motif:HMM:NF025946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX9892374.1"
                     /translation="SVRMDFAALWDEAESFETFLARAKKLRPLWAGVYRSATIPAWAL
                     EGYGSLPDGLKLLVLNADWCLDSASTVPILARLAERVPGVELGLLERDDHLELMDRYL
                     TEGTRSIPLVILLDRDYHEVAHWGPRPAELQSWVRLHLEELSKAERQKEQRGWYARDR
                     GETVLREILTKVLSTEY"
BASE COUNT          514 a         1003 c         1015 g          514 t
ORIGIN      
        1 ggacggccac caaggtggcg aggccgaaca caccgccgaa cacgaagcgg agaaaccgcg
       61 gcgggatgac cccggcttcg cgcgacctgg atgagcgcac agtggggaaa acgtaggagt
      121 ctgccaaacg ggcggcaagc cgctccgggg cagtcgaagg ggtcgaaggc agtcgaagga
      181 gtcgaaggac cccttcgact ccttcgactc cttcgaccgc accaattgac accacccccg
      241 gttcgcgcct tcaattccag acctgttcct tccccagacc ggagcccgca tgtccgatcc
      301 tgtctcccgc cggacctttc tcggcgctgc cgcggcactg gcggcgggcg cggtgcccgc
      361 cggggcggag ccgcgttccg tcgcgccctt tgtgcctcgg ccgcggcagg cgcggattgc
      421 cgccgtgagc tcgagcaacg gactcagggc ggtgaaccgc gcggtcgagc tgatgacgca
      481 ggggatggac ccactcgacg cgggggtcga gggcgtcaag atccaggagc tcgatccgga
      541 ggacatgtcg gtcgggtacg gggggctccc caacgaggag ggcgtagtgc agttggacgc
      601 ctcctgcatg cacgggccct cccggcgagc cggggcggtt gcggcgctgg aagggatcaa
      661 gacgccgagc gaagtagccc ggctggtatt gcggtacacc agtcacattc tcctggtggg
      721 ggccggcgcc aagcggttcg cgctgtccta cggcttcaag gaggaggacc tgctgacccc
      781 caagtcgcgg gaggcctggc tccggtggcg cgccaaccgc ggcaaggaag acgactggat
      841 cgacatcccc cagggagaac cgctcgcggc ccggccgacc gggaccatca acctcaacct
      901 catcaacgag aagggcgaga tctcctcggt cacgactacc agcggtctgg cgtggaagat
      961 tccgggacgg gccggggact cgcccatcat cggggcggga cagtacaccg ataacgagat
     1021 cggcgcggct ggatcgaccg ggcggggcga atccaacatc atggtctgcg gcgggttcct
     1081 gaccgtggag aacatgcgcc gcggcatgtc accgaccgat gcctgcctcg agaccctccg
     1141 acgggtcgtg gagctgacgc cgccgcccct gatcgatgag cagggccggc cccggttcgg
     1201 gctcgtgttc tacgccctca acaagaaggg cgagatcggg gccgggtcac tgttccccgc
     1261 ccgttacgcg gtgcacgacg gatcaaaggg ggagctgcgc gacgccgcct tcctctatca
     1321 accccgccgt tgatgcgatt atcgacgtgg gccaccggtc tggtgctgtg cgcgaccccc
     1381 ctggcggcgc aggagccgtg gggtgccagc tactatccct actttctcaa gggacccaac
     1441 gaccagctgt cggtggtgct gcactatcaa tacgggcaac cggcggacta tttcgaccgg
     1501 gtgccgttcg cgcagagcct gtcgctcgag ggaggcatca atgccagcgg cagccggttt
     1561 ctgatcggac atctcaaatt cccccgtctg gcacccggct ggcggttgta tggcgcggct
     1621 ggagccgtgc gcgaaaaccg gttcggctac ttcggccgcg gcaacgacac cgaggagacc
     1681 gaggatcctc cggctgagaa cacctgggtc aaccggatgc gccgcagccg ctacttcggc
     1741 cgggtcgagc tgacccggca gctggtgggc ccgctgcacc tgtcgctggg tggaagcatc
     1801 accgacgccc gcttcgccac cttgcccggt gggtcgcgtt tcctggacga ccatttcatc
     1861 caggtcccgt gcctgcccgg tgagccctgt ccccaaccgc cgggggatcc gagcgatgtc
     1921 gatgtgctgg ggcaggtgcg cctcatcctc gatgtccggg acaacgagtt cgtggcctcg
     1981 cgcggcgttt tcgttgaagc cgggttggag accggttcag gcggcgaggg atacagtggt
     2041 gcttttgtct tcgccaccgg gtccattccg ccgtgggaag gcgccgttct cgccagccgc
     2101 gtgctggtcc ggagcatcga atccggggcc ccgctcgacg cccgctacac gctccatgcc
     2161 tgggagcgat ccatcccgct gctgggcgga cccgaatcgc atcgggcctt cgtgtacggc
     2221 cggtacaccg ggcggcaggt ggtggtgggt tcgctcgagt tccgccagga cattctcaac
     2281 ttcggcgact acggcgcttt taccggcatc gggttcatcg acgcggggat ggtgcaggag
     2341 gtgaaggccg ccgaatccaa tacccttcac gtcggcggag gggtcggcct ggcaatgcgc
     2401 atcctccgct cgacggtact gcaattcacc ttcgccgtcg gcggggatgg gtttcagttc
     2461 agcatgggat cggggtggag cttctaacta ccagtactga ctaccagtac tcagtactca
     2521 gtactcagta ctttggtaag gatttcccgt aagacagttt ctccccgatc cctcgcatac
     2581 cagccgcgtt gttccttctg ccgttctgct ttggagagct cctccagatg gagccggacc
     2641 caggattgca gctccgccgg ccgagggccc cagtgagcca cctcgtggta atcgcggtcg
     2701 agcagaatga cgagcgggat ggatcgggtg ccctcagtga gataacgatc catcagctcg
     2761 aggtgatcgt cccgctccag cagacccagc tccactcccg gaacccgttc cgccagccgt
     2821 gccaggatcg gcacggtgct ggccgaatcc agacaccaat cggcgttcag caccagaagc
     2881 ttcaggccgt ccggcaggct cccgtagccc tccagcgccc aggccggaat cgtggcgctc
     2941 cggtagaccc ctgcccaaag gggccggagt tttttcgcgc gggccaggaa ggtctcgaag
     3001 gactctgcct catcccacag cgcggcaaag tccattctga cggacg
//
LOCUS       DASWKS010000014         8054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2224559, whole genome shotgun sequence.
ACCESSION   DASWKS010000014 DASWKS010000000
VERSION     DASWKS010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2224559"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VGA78_00565"
     CDS             complement(<1..191)
                     /locus_tag="VGA78_00565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892375.1"
                     /translation="MSTCRAFVAALLLAASGCAQTFDATALGIPVTMASQAGPAPQGE
                     RFRVNSTSLFAAWGLLPITR"
     gene            complement(210..872)
                     /locus_tag="VGA78_00570"
     CDS             complement(210..872)
                     /locus_tag="VGA78_00570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892376.1"
                     /translation="MRLLLLGSTAALALTAQAAAQTPGLAIHGAGLPGGIHVGATAGL
                     SGSSSWPGEAFALGASLGFSSGRIGVVGTVGRIDFDADPFESSLTVGVRGVLRLFGGG
                     LDIPLQVDAFAGYGRFDEPDERCLSCPIPWSARGAYHVPAGLGLTLNLSTPVFSIRPW
                     LAPRVELFTGLSGDVGVTETDWAASAGVDLRFLGGLGLTVAWDKIEHVDQIIGFGVTY
                     RF"
     gene            complement(884..1486)
                     /locus_tag="VGA78_00575"
     CDS             complement(884..1486)
                     /locus_tag="VGA78_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892377.1"
                     /translation="MSRKLTLLIGTLACVAVDAAAQTVGTPVFMAPFRAFTSSEFGAT
                     FSDPGNGWALEGAYRYGSGGWDIGVRAGFWNFERAGDDDLYVLAGADFRYRVITHTEE
                     FPLDGAVTFGIGGAFGDNSVGFVPVGLSLGRRVELEDSDVSFVPYLHPIIGFTFGDNS
                     DGIFALGLGVDFKLSSRFDLRITGGIGDIEGIGIGFAWVR"
     gene            complement(1476..1736)
                     /gene="atpC"
                     /locus_tag="VGA78_00580"
     CDS             complement(1476..1736)
                     /gene="atpC"
                     /locus_tag="VGA78_00580"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF014838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HEX9892378.1"
                     /translation="MRVLVISPEASMFDGDAESVVVPVYDGQVGILPGHAPFMAPLGR
                     GTLTITHQGQPRRFRVNGGFLQVVSNTVRVVAEQVQGEAHES"
     gene            complement(1736..3163)
                     /gene="atpD"
                     /locus_tag="VGA78_00585"
     CDS             complement(1736..3163)
                     /gene="atpD"
                     /locus_tag="VGA78_00585"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX9892379.1"
                     /translation="MTATATQNVGTVVQVIGPVLDIEFAPEKLPEIYSAVRVDDESGP
                     LPVHLVAEVQQHIGQNVVRAVAMSSTDGVSRGMQALDTGGPITVPVGEVPLGRILNVL
                     GDPVDGGAPIPAGTERWPIHRATPKYVDLEPKTEIFETGIKVIDLIAPFVKGGKIGLF
                     GGAGVGKTVVIQELINNVQKGHGGRSVFCGVGERTREGNDLYHEFKEANILGSVALIY
                     GQMNEPPGARLRVGLTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS
                     AVGYQPTLGTEMGDLQERITSTTKGSITSVQAIYVPADDLTDPAPATAFAHLDATVVL
                     SRAIAELGIYPAVDPLDSSSRILDPQFIGERHYQVAIGVQQTLQRYKALQDIIAILGM
                     DELSEEDKLIVARARRLQRFLSQPFHVAEQFTGFPGKYVKLEDTIASFARVLAGEFDH
                     LPEQAFYMQGGIEDVVARSKQLATS"
     gene            complement(3290..4171)
                     /gene="atpG"
                     /locus_tag="VGA78_00590"
     CDS             complement(3290..4171)
                     /gene="atpG"
                     /locus_tag="VGA78_00590"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HEX9892380.1"
                     /translation="MANKGRALKGRIRSVQNTKKITKTMELVSTSKMKRAQDRVAAAR
                     PYAAALAEVIGDLWTPELAEQFALLKQPAPPTKGGPTRVSLILITSNRGLCGAFNGNL
                     IKEARRRIEALEARGYSVDLHCVGRKGAGYFKYLGRPLASDRSDIGDSPTSAHAASVV
                     GPLIDDFAAGRIAGVEMVQARFQSALSTPPLLVKVLPIAPPARTGRRPDYILKPDAAT
                     ILESLLPLYVRNLVYRGLAETAASEHAARRTAMKNATDNATEIVQLLTRVYNRNRQAV
                     ITQEIAEIVGGAAALEG"
     gene            complement(4184..5761)
                     /gene="atpA"
                     /locus_tag="VGA78_00595"
     CDS             complement(4184..5761)
                     /gene="atpA"
                     /locus_tag="VGA78_00595"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX9892381.1"
                     /translation="MATETTLRPGELKDVLLKEIEAAQLGAVDVAEVGTVLEVRDGVA
                     RIYGLRNAIAGEMLEFTAQGTGDVVTGLVLNLEQDNVGAAVMGDYLKLKEGDEVRCTG
                     RLLEVPVGEAMLGRVVNALGQPIDGRGDIAYQATRPVEMIAPGIVVRQPVKEPLQTGI
                     KAIDAMTPIGRGQRELIIGDRGTGKTAIAVDTMINQKGQGVVCVYIAIGQRLSTVATV
                     VERLKDAGAMEYTIVVVASASDPAPLQFIAPYTGCAIAEHFMYTQGKATLCIYDDLSK
                     QATAYRQMSLILRRPPGREAYPGDVFYLHSRLLERAAKISEDPNVVKADPRIKVPGGS
                     LTALPIIETQGGDVSAYIPTNVISITDGQIFLTTDLFYSNVRPAVDAGISVSRVGGNA
                     QVKAMKQVAGPLRLSLAQFRELEAFSQFASDLDAATQRQLQRGARLVEVLKQPQYRPM
                     AVEDQVAIIWVVTNGFLDSVDVRHIRQWERDFLQYLRTTQPKVPETIRTKKTLDDDLT
                     ARLRASVEAFSPLFRAE"
     gene            complement(5845..6621)
                     /locus_tag="VGA78_00600"
     CDS             complement(5845..6621)
                     /locus_tag="VGA78_00600"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9892382.1"
                     /translation="MAAVAALLDTRGALQSLRRSLPPPARRLCACRSPQALRRTLGTR
                     LLDAVVVGHRALRSPELLAFRTQFPALPVVVYGAFRPDDGALLLRLEDAGSVAAIAVE
                     GVDDAVVGEMVRAETLSARRRAALSQAPRLLRLTDGIQRRTWDVLVAGSSWRLGTQEL
                     AARLDLSREHLSRQFAAGGAPNLKRVIDFLRIVTAAQLLTNPGYDLITVARLLGFSTV
                     SHLHAMARRTAGQPAARLGSLAPPEILAAFVRVGTRSRRE"
     gene            complement(6625..7119)
                     /locus_tag="VGA78_00605"
     CDS             complement(6625..7119)
                     /locus_tag="VGA78_00605"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX9892383.1"
                     /translation="MGKRRPVREVSAGGIIFRRLPDNSLRFLLIRDSYDKWGLPKGHL
                     EEGETPAEAALRETREEVGLGDLRLIGPIRIIDWHFRAKGGKLVHKFCHFFLLESPGD
                     EPVPQLDEGITACRWCPLDEALADLSYDNARGVLRRAGDMARTLTAVGAGRPREVPKP
                     IQPV"
     gene            complement(7119..>8054)
                     /locus_tag="VGA78_00610"
     CDS             complement(7119..>8054)
                     /locus_tag="VGA78_00610"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX9892384.1"
                     /translation="LFLSEADIGATNRVQVARFRSIGRLQPGGPVLLRGVRIGTVQSV
                     RLADDNWVEAELRVDRQVELPPRPAVVVISASLFGEWQAEIVSQDQLPNNPGIRADIQ
                     AAAQGAGDRWPGADMPGIGELTAQANRIANDVGLITSRVEGAIDSAVIADLRRSVADL
                     TAITAHLTQFAKEETSTIGRITGRATAITENLDVTTAALRNTMRRVDTATSTGDLQEI
                     FGNARTTTANLRDVSSDLKQLSSAVLGTREAMLRTLAGLDSVMIRLQRGQGTFAKLTT
                     DSTLYVETTAAITELRSLIADIRINPRKYFRFSVF"
BASE COUNT         1323 a         2709 c         2741 g         1281 t
ORIGIN      
        1 cgggtaatcg gcagcaggcc ccaggcggca aacaggctgg tggagttgac ccggaagcgc
       61 tcgccttggg gcgccgggcc ggcctggctg gccatggtaa ccgggatgcc gagcgccgtc
      121 gcgtcgaagg tctgcgcgca cccgctcgca gccaacagca gcgcggcgac gaaggcccgg
      181 caagtggaca tacgggagct ctccaatgac tagaagcggt aggtgacgcc gaagccgatg
      241 atctgatcga cgtgctcgat cttgtcccat gccaccgtga gcccgaggcc gcccaggaac
      301 cggagatcca ccccggcaga ggccgcccag tccgtttccg tgacgccgac gtcaccgctc
      361 agtccggtga acagctcgac gcgaggggcc agccagggac gaatcgagaa caccggtgtg
      421 ctcaaattga gggtcaggcc caggcccgcg ggcacgtggt aggccccgcg agcactccat
      481 gggatagggc aactgagaca tcgctcatcc ggctcatcga agcggccata ccctgcgaag
      541 gcgtcgacct ggagcgggat gtcgagtccg ccgccgaaca gccggagtac cccgcgtacc
      601 ccgacggtca agctcgactc gaacggatcg gcgtcgaaat caattcggcc caccgttccc
      661 accaccccga ttcgcccgct gctgaatccg agcgaggcac ccagggcgaa cgcctcaccc
      721 ggccagctgg atgatccact aaggccggcc gtcgcaccga cgtgtattcc gcccggcagc
      781 ccggcgccat gaatggccag ccccggcgtc tgcgccgctg cttgagcggt cagagccagg
      841 gctgccgtcg aacccagcag gagaagccgc acgcgatgcc ggcttatcgc acccaggcga
      901 atccgatacc gatgccctcg atgtcaccga tgccgccggt gatccggaga tcgaaccggc
      961 tgctcagctt gaagtccacc ccgaggccca gcgcgaagat gccgtcgctg ttgtcgccga
     1021 aggtgaaccc gatgatcgga tgcaggtagg gcacgaagct gacatcgctg tcctccagct
     1081 ccacccggcg gcccagcgac agacccaccg gcacgaaccc gaccgagttg tcgccgaagg
     1141 cgcccccgat gccgaaggtc accgcgccat cgagcggaaa ctcctcggtg tgggtaatga
     1201 cccggtaccg gaaatcggcg cccgcgagca cgtacaggtc gtcgtcgcca gcccgctcga
     1261 agttccagaa cccggcccgg accccgatgt cccaaccacc gctgccgtag cggtaggccc
     1321 cttccagggc ccatccgttg ccgggatcgc tgaaggtggc tccgaattcg gaggaggtga
     1381 aggcgcgaaa gggcgccatg aagacgggcg tgccgaccgt ctgggcggcg gcgtcgaccg
     1441 cgacgcacgc cagtgtgccg atgagcagcg tgagcttacg actcatgcgc ctccccctgg
     1501 acttgttccg cgacgacgcg gacagtattg gaaacgacct gcaggaatcc gccgttcacc
     1561 cgaaaccgcc gcggctgtcc ctggtgcgtg atggtcagcg tgccgcgacc gaggggagcc
     1621 atgaagggtg cgtgaccggg gaggatgccg acctgtccgt cgtacaccgg cacgacgacc
     1681 gactcggcat ctccgtcaaa catagacgcc tcgggcgaaa tcacgagcac acgcatcagg
     1741 aggtcgccag ttgtttcgaa cgtgcaacga cgtcctcgat gccgccctgc atgtagaacg
     1801 cctgctccgg caggtgatcg aactcgccgg ccaggactcg cgcgaagctg gcgatggtgt
     1861 cctccagctt gacatacttg ccggggaagc cggtgaactg ctccgccacg tggaacggct
     1921 gcgagaggaa ccgctgcagc cggcgggccc gggccacgat cagcttgtct tcctcggaca
     1981 gctcgtccat gcccagaatg gcgatgatgt cctgcagcgc cttgtagcgc tgcagggtct
     2041 gctgcacccc gatggccacc tggtagtgcc gctcgccgat gaactgggga tcgaggatcc
     2101 ggctggagct gtcgagcgga tccacggcgg gatagatccc cagctccgcg atggcgcggg
     2161 acagcaccac cgtggcatcg aggtgggcga aggccgtggc cggggccgga tcggtcaggt
     2221 cgtcggcggg gacgtagatg gcctgcaccg aggtgatgga gcccttggtg gtcgaggtga
     2281 tccgctcctg caggtcaccc atctcggtcc ccagggtcgg ctggtagccc accgcgctcg
     2341 gcatccgccc caacaaggcg gacacttccg agccggcctg ggtgaagcgg aagatgttgt
     2401 cgatgaagag cagcacgtcc tggccttcga tgtcgcggaa gtactccgcc acggtgaggc
     2461 cggtcagccc tacccggagc cgggcgccgg gcggctcatt catctggccg tagatgagcg
     2521 ccaccgagcc caggatgttg gcttccttga actcgtggta gaggtcgttc ccttcccggg
     2581 tccgctcgcc caccccacag aagaccgagc gacccccgtg gcccttttgc acgttgttga
     2641 tcagctcctg gatgaccacc gtcttcccca cgccggcgcc gccgaagaga ccgatcttgc
     2701 cgcccttcac gaagggggcg atcagatcga tgaccttgat gccggtctcg aagatctcgg
     2761 tcttgggctc gaggtcgacg tacttgggcg tggcgcggtg gatgggccag cgctcggtgc
     2821 cggccgggat gggcgccccg ccgtccactg gatcgcccag cacgttcagg atccgtccca
     2881 ggggcacctc acccaccggc accgtgatgg gaccgccggt atcgagcgcc tgcatgccgc
     2941 gggagacccc gtcggtggag ctcatggcca cggctcggac cacattctgg ccgatgtgct
     3001 gctgcacttc cgccaccagg tgaaccggga gcgggcccga ctcgtcgtcc acccgcaccg
     3061 ccgagtagat ctccggcagc ttttcggggg caaactcgat gtcgagcacc ggcccgatga
     3121 cctgcacgac cgttccaaca ttctgagttg cagtggcggt catagaatct gagctttctc
     3181 tcaaccatac ggtttttcta ttgacgattg acagttggcg attgacaatt gcgcacgacg
     3241 gaacgccggt gctcaatcga caatagtcaa ttgtcaatcg tcaaagtggt tacccctcca
     3301 gcgccgccgc cccgcccacg atctcggcaa tctcctgggt gatcaccgcc tggcggttcc
     3361 ggttgtacac ccgggtcagc agctgcacga tctcggtggc gttgtcggtc gcattcttca
     3421 tcgccgtgcg ccgggccgcg tgctccgacg ccgcggtctc ggccagcccg cgatagacca
     3481 ggttgcggac gtagagcggg agcaggctct ccaggatggt cgcggcgtcc ggcttgagga
     3541 tgtaatccgg gcggcggccg gtccgcgccg gcggcgcgat cggcagcacc ttgaccagga
     3601 ggggcggggt cgagagcgcg ctctggaacc gcgcctgcac catctccaca ccggcgatcc
     3661 ggcccgcggc aaagtcgtcg atcaagggcc cgaccacgct ggcggcatgg gccgacgtgg
     3721 gcgaatcacc gatgtcggac cggtcggacg cgagcgggcg ccccagatac ttgaaatagc
     3781 cggcgccctt ccggcccacg cagtggagat cgacgctata cccccgggcc tcgagcgctt
     3841 cgatccggcg gcgggcttcc ttgatgaggt tcccgttgaa ggcgccgcac agcccgcggt
     3901 tggaggtgat caggatcagc gagacccggg tgggaccgcc cttcgtcggc ggggccggct
     3961 gcttgagcag agcgaactgt tccgccagct ccggggtcca gagatcgccg atcacctcgg
     4021 ccagcgcggc ggcgtagggc cgggccgccg ccacccggtc ctgggcccgt ttcatcttcg
     4081 acgtggagac caactccatc gtcttggtga tcttcttggt gttctggacc gaccggatgc
     4141 gccccttgag cgcacgcccc ttgttggcca tcccgcggct cctctactcg gcccggaaga
     4201 ggggcgaaaa ggcctcaacg ctcgcccgca gcctggcggt cagatcgtca tcgagcgtct
     4261 tcttggtgcg gatggtctcc ggcaccttgg gctgggtggt gcgaaggtac tggagaaagt
     4321 cgcgctccca ctgccggata tggcgcacgt ccacgctgtc gaggaagccg ttggtcacca
     4381 cccagatgat ggccacctga tcttccaccg ccatgggccg gtactgcggc tgtttgagca
     4441 cctccaccag ccgggcgccc cgctgcagct gccgttgggt cgccgcatcg agatcggagg
     4501 cgaactggga gaaggcttcc agctcccgga actgggccag ggagagccgg agcggcccgg
     4561 ccacttgttt catcgccttg acctgcgcgt tgccgcccac ccggctgact gagatgcccg
     4621 catccaccgc cggccgcacg ttggagtaga acagatcggt ggtgagaaag atctggccgt
     4681 cggtgatcga gatgacgttg gtggggatat aggccgagac gtcgccgccc tgggtctcga
     4741 tgatcggcag cgcggtgagc gacccgcccg gcaccttgat gcgggggtcg gccttgacca
     4801 cgttcgggtc ctccgagatc ttggcggccc gctccagcag gcggctgtgg aggtagaaca
     4861 cgtcgccggg ataggcctcg cgtcccggcg gccggcgcag gatcagcgac atctgacggt
     4921 aggccgtggc ctgcttggag agatcgtcgt agatgcagag cgtggccttg ccctgggtgt
     4981 acatgaaatg ctcggcgatg gcgcagccgg tgtaaggcgc gatgaactgc agcggggccg
     5041 ggtcggaggc cgacgcgacc accacgatgg tgtattccat ggccccggcg tccttgagcc
     5101 gctccaccac ggtcgccacg gtcgagagcc tctggccgat cgcgatgtag acgcagacga
     5161 cgccctgccc cttctgattg atcatggtat cgaccgcgat ggcggtcttg ccggtgcccc
     5221 ggtcgccgat gatcagctcc cgctggcccc gcccgatcgg cgtcatggcg tcgatggcct
     5281 tgatcccggt ctgtaacggc tccttcaccg gctgccgcac cacgatcccg ggcgcgatca
     5341 tctccaccgg ccgggtcgcc tggtaggcga tgtcgccccg gccgtcgatc ggctgtccca
     5401 gagcgttcac cacccggccc agcatggctt cgcccaccgg cacttccagc agacgaccgg
     5461 tgcagcggac ctcatcgcct tccttgagct tgagatagtc gcccatgacg gcggcgccga
     5521 cgttgtcctg ctccaggttg aggaccagcc cggtgaccac gtctccggtc ccctgggcgg
     5581 tgaactccag catctcaccg gcgatggcgt tgcgaagacc gtagatccgg gcgaccccgt
     5641 cgcgcacctc cagcacggtc ccgacctccg cgacgtcgac cgcgcccaac tgagcggctt
     5701 cgatctcctt gagcagcacg tccttgagtt cgccgggccg gagggtggtt tcagtagcca
     5761 tggtctctgc gtgagcgcgg gttaaagaac gcgtggggtt cgcttgtgaa aataatcaca
     5821 atggggaggc cagggcaagg caagtcactc ccggcgtgac cgggtgccga cccgaacaaa
     5881 ggcggccagg atctcgggcg gcgccaggct tcccagccgg gcggcgggct gaccggcggt
     5941 tcggcgagcc atcgcgtgca ggtgactcac ggtggagaaa cccagcagcc gcgccacggt
     6001 gatgaggtcg tagcccgggt tggtgagcag ctgcgcggcc gtcacgatgc gcaggaagtc
     6061 gatcacccgt ttcaggttgg gcgcgccccc agccgcgaac tgacgcgaca gatgttcccg
     6121 gctgaggtcg agccgagccg ccagttcttg ggttccgagg cgccagctcg atcccgccac
     6181 caggacatcc caggtccggc gctgaatccc atcggtgagt cgcaggaggc gaggggcctg
     6241 cgacagggcc gcccggcgcc tggcgctcag ggtctccgcc cgtaccattt ctcccaccac
     6301 ggcatcgtcc actccttcga ccgcgatcgc cgcgacactc ccggcatcct ccagccgcag
     6361 cagcagcgca ccgtcgtcgg gacggaacgc cccatagacc accaccggga gcgcgggaaa
     6421 ctgggtccgg aaggcgagca actcggggct gcggagggcg cggtgaccca cgaccacggc
     6481 gtccagcagc cgggttccca gggtgcggcg aagcgcctgg ggcgaccggc aggcacacag
     6541 ccggcgggct ggaggaggca ggctgcgccg cagcgactgg agggcgccgc gggtatcgag
     6601 cagggcagcg acggccgcca tggctcagac cggctggatc ggcttcggaa cctcgcgagg
     6661 ccggcccgcg cccaccgcgg tcagggtgcg ggccatgtct cccgcgcggc gcagcacccc
     6721 gcgcgcattg tcgtagctca aatcggcgag ggcctcatcc agcgggcacc agcggcaggc
     6781 ggtgatgccc tcatcgagct gcgggacggg ctcgtccccc ggcgattcca gcagaaagaa
     6841 atggcagaac ttgtggacca gcttgccgcc cttggcccgg aagtgccagt cgatgattcg
     6901 aatgggaccg atgagccgga gatcccccag acctacttcc tcgcgcgttt cgcgcagggc
     6961 ggcctcggcc ggggtctcac cctcttcgag gtgccccttg ggcagccccc acttgtcgta
     7021 ggaatcgcga atcagcagga agcggagcga attgtcgggc aatcgccgga agatgatgcc
     7081 gcctgcgctg acttcgcgca ccggccgccg cttacccatc aaaacaccga gaagcggaag
     7141 tacttccgcg gattgatccg gatgtcggcg atgagcgacc ggagctcggt gatggcggcg
     7201 gtggtttcca cgtagagcgt ggagtcggtg gtgagcttgg cgaaggtgcc ctggccccgc
     7261 tgcagccgga tcattaccga atcgagaccg gccagggtgc ggagcatggc ctcgcgggtg
     7321 cccagcaccg cgctcgagag ctgcttcagg tcggacgaga catcccgcag gttggcggtg
     7381 gtggtgcggg cgttgccgaa gatttcctgc aagtcgccgg tgctggtggc ggtgtcgacc
     7441 cgccgcatcg tgttgcggag ggctgccgtg gtgacgtcga ggttctcggt gatcgcggtc
     7501 gcccggccgg tgatccggcc gatggtggag gtctcttcct tggcgaactg ggtcaggtgg
     7561 gcggtgatgg ccgtcaggtc cgcgacactg cggcgcaggt cggcaatcac ggcggagtcg
     7621 atcgccccct cgacccgcga ggtgatgagg ccgacgtcgt tggcgatccg gttggcctgg
     7681 gcggtgagct ctccgatgcc gggcatgtcg gcgccgggcc agcggtcgcc ggcgccctgg
     7741 gccgccgcct ggatgtcggc ccggatgccg ggattgttag gcagctggtc ctggctcacg
     7801 atctccgcct gccactcccc gaacaggctg gccgagatca ccaccaccgc gggccggggc
     7861 gggagctcga cctggcggtc gacccggagc tcggcctcca cccagttgtc atcggccagc
     7921 cgcaccgact ggacggtgcc gatccggacc cccctgagca gcaccgggcc gcccggctgg
     7981 agccgcccga tggagcggaa gcgcgcgacc tggacccggt tggtggcgcc gatgtcggcc
     8041 tcgctcagga acag
//
LOCUS       DASWKS010000015         2270 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2963383, whole genome shotgun sequence.
ACCESSION   DASWKS010000015 DASWKS010000000
VERSION     DASWKS010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2963383"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VGA78_00615"
     CDS             <1..921
                     /locus_tag="VGA78_00615"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9892385.1"
                     /translation="TSDRVAEDLEQVRRALGYERLILWGGSFGTRVAQTYARRHPDRV
                     QAMILDGVVPFDFTAPLNYASTLQQSVDRLLASCRARRTCHDSFPNLDAQWKSLVEKV
                     RAGPVQTRVTPPGRPPVEVTMHLGDFGYGVRGILYRADQSRRLPAMIEAAARTGDLSD
                     FAQRYWGRAADFEEDFAEGLHLAVFCSEEIPFIREADVPVATTRSFLGTYLIDEYRGA
                     CQGWPRAPMDPSFRRPLQAPVPTLLVSGYFDPVTPPEMAERVARHLPVHRHLVDSAAH
                     HGASFGCARPAVLHVLSRGTLEGLPVVCGR"
     gene            complement(923..2167)
                     /locus_tag="VGA78_00620"
     CDS             complement(923..2167)
                     /locus_tag="VGA78_00620"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9892386.1"
                     /translation="MILASFIGTTIEWYDFFLYGTAAALVFNRLFFPTLDPLAGTLSA
                     YGTFAVGFVARPLGGAVFGHYGDRVGRRTMLVWSLLLMGIATALIGLIPAYDRIGVWA
                     PVLLVLLRFIQGIGVGGEWAGAVLMVVEHSGGERRGFHGAWPQMGVPAGLLLSTGIFA
                     LLSATLSETALLAWGWRIPFLISVILIGVGLFIRLRLLETPAFARLKESGRESRVPLV
                     DLFREHPREILVGMGMRFAQNVLFYVYTVFVLSYGEKTLGYPRGTMLGGVMLASIVGL
                     FSIPFWSHLSDRVGRRPVYLTGAVISLLFVWPFFWLLGRGSTALIWLSIVFAMNVGHD
                     LMYGPMAAYLSELFGTHVRYSGASLVYQLTSVFSGGLAPFIATLLMARYGTGAVAAYL
                     GIACTITVVATWFAPETHRRNL"
BASE COUNT          436 a          758 c          740 g          336 t
ORIGIN      
        1 accagcgacc gggtggccga ggatctggag caggttcggc gggcgttggg atacgaacgg
       61 ctgattctct ggggaggatc cttcggaacc cgggtggcgc aaacctatgc tcggcgacac
      121 cccgaccggg ttcaggccat gatcctggat ggggtggtac cgttcgactt caccgcgccg
      181 ctcaattatg cctccacact gcagcaatcg gtcgaccggc tgctcgcctc ctgccgcgcc
      241 cgacggacct gtcacgattc cttccccaac ctcgacgcgc agtggaagag cctggtggaa
      301 aaggtccgcg ccggtccggt tcagaccaga gtcacgccgc ccggccgtcc cccggtggag
      361 gtcaccatgc atctgggtga tttcgggtac ggggtccgcg ggatccttta tcgggccgat
      421 cagtcgcgcc ggctcccagc catgatcgag gccgcggccc gcaccggtga tctgagcgac
      481 tttgcacagc ggtattgggg ccgtgccgcc gacttcgagg aggatttcgc cgaaggactc
      541 catctggcgg tgttctgcag cgaggaaata ccgttcatcc gggaggcgga cgtgccggtg
      601 gcgacgacca ggagctttct cgggacctac ctgatcgatg agtatcgggg ggcatgccag
      661 ggatggcccc gggcaccgat ggacccgagc ttccggcggc cgttgcaagc accggtacct
      721 actctcctgg tttcgggcta cttcgacccg gtgactccgc cggagatggc ggagcgagtc
      781 gcgcgccacc tcccggtaca ccggcatctc gtcgactcgg cggcccacca cggggcgagc
      841 ttcggctgcg cccggccggc cgtactgcac gtcttgagtc ggggaaccct ggaaggattg
      901 ccggtagtct gcggccgttg agctacaggt ttcttcggtg ggtttcgggc gcgaaccagg
      961 tcgccaccac cgtaatcgtg catgcgatcc ccagataggc cgcaaccgcg ccggtgccgt
     1021 aacgggccat gaggagcgtg gcgatgaacg gtgcgagccc gcccgagaac accgacgtca
     1081 gctgatagac cagcgacgcc ccgctgtacc gcacgtgggt tccgaacagc tcggacaggt
     1141 acgccgccat cggtccatac atgagatcgt gtcccacatt catcgcgaat acgatggaca
     1201 gccagatcaa cgcggtggac ccccgaccca gcagccagaa gaagggccac acgaacagca
     1261 gtgaaatgac ggcgcccgtg aggtacaccg gccggcggcc gacccggtcg gacaagtggg
     1321 accagaacgg aatcgagaac aggccgacga tcgaggccag catgaccccg cccagcatgg
     1381 tgccgcgagg atatcccagg gttttctcgc cgtagctcag cacgaacacg gtgtagacgt
     1441 agaacagcac gttctgcgcg aagcgcatgc ccatccccac caggatttcg cgcggatgct
     1501 cccggaacag gtccaccaac ggcacccgcg attcccggcc ggattccttg agtcgggcga
     1561 aggccggtgt ctccaggagc ctgagccgga tgaagagccc gaccccgatc aggatcaccg
     1621 agatgagaaa cgggatgcgc cagccccagg cgagcagggc ggtctcgctc aaggtggccg
     1681 agagcagggc gaagatgccg gtggagagca gcaacccggc cgggacgccc atctggggcc
     1741 aggccccatg gaagccccgg cgctccccgc cggaatgctc gaccaccatg agcacggcac
     1801 cggcccattc gccgcccacg ccgatcccct ggatgaatcg aagcagcacc agcagcacgg
     1861 gagcccagac cccgatgcga tcgtaggccg gaatgagccc gatcagcgcg gtcgcgatcc
     1921 ccatcaggag cagcgaccag accagcatgg tccggcggcc cacccgatcg ccgtagtggc
     1981 cgaagaccgc tccgcctaac ggccgggcaa cgaacccgac ggcgaaggtg ccgtacgcgc
     2041 tcagcgtccc ggccagcgga tcgagggtcg gaaagaacag ccggttgaag accagcgcag
     2101 ccgcggtccc gtagaggaag aaatcgtacc actcgatggt tgtcccgatg aagctcgcca
     2161 gaatcacccg gcgaagcccc cttcgaccgc cttcgactgg cagtttaggc gccgtacgga
     2221 atccagatgt tcttgacctg ggtggcctcg cgcaggaacc gttcaccctc
//
LOCUS       DASWKS010000016         3415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1486007, whole genome shotgun sequence.
ACCESSION   DASWKS010000016 DASWKS010000000
VERSION     DASWKS010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1486007"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /gene="kdsA"
                     /locus_tag="VGA78_00625"
     CDS             <1..817
                     /gene="kdsA"
                     /locus_tag="VGA78_00625"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEX9892387.1"
                     /translation="TVSGWSFGSAPFLIAGPCVVESDDVMATVAEALVRLADAHRIRV
                     CFKASFDKANRARLEGARGPGVEEGLRALERVRDRSGLPLLTDIHDGSQALVAAQVVD
                     VLQIPAFLSRQTDLLRAAGRTGKPVNIKKGQWMDPDGMIGAVEKVRAGGSSEIAVTER
                     GTFFGYGDLVVDMRNLRRLHDATGVPVIFDATHSVQQPGQGPGGGSGGQREHVPALLA
                     AAAVAGADGFFLETHPDPARALSDAATQWPLDRLPWLLHRTLDLWRRARESQG"
     gene            814..1362
                     /locus_tag="VGA78_00630"
     CDS             814..1362
                     /locus_tag="VGA78_00630"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HEX9892388.1"
                     /translation="MSSTEAAARVRLLALDVDGVLTDNAVYLGLVDGQRVEMKRFDIQ
                     DGLGLGLLRGGPIEVVWVSGRLSESTTLRATELKVAELIQVADGHKVPPFADLLARRG
                     YHWDEVAFVGDDLADVPVLRRVGLPIAVANAIDEVKALARYVTHAPGGRGAVREVVTW
                     LLRQRNEYDSAVRHYLGARDDP"
     gene            1359..2315
                     /locus_tag="VGA78_00635"
     CDS             1359..2315
                     /locus_tag="VGA78_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEX9892389.1"
                     /translation="MTDDLVAAGRRTLELEASALTRAAGRLDRRFGDAVALLAGALGR
                     VIVSGVGKSGLIARKIAATFTSTGTPASFLHPVDSLHGDLGIVGRKDVAILVSKSGES
                     EELFGLISSLQRLEVPIIALTGERASSLGRAAAVVLDAGVEQEACPLRLAPTTSTTVA
                     LALGDALAVAVLEVKGFTQDDFAALHPGGALGRKLLLQVRDVMLPVGGTVRPDSPMRD
                     VVMALAHHRGLAIVVETGRVAGVISAGDLTRIAERDGDFLALPAAEVMTRTPRTTTDD
                     TLAAAVTGQMERVGIMAMPVLGEGGRLVGVVHLHDLMRAGAF"
     gene            2387..2920
                     /gene="lptC"
                     /locus_tag="VGA78_00640"
     CDS             2387..2920
                     /gene="lptC"
                     /locus_tag="VGA78_00640"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEX9892390.1"
                     /translation="MGALFGVGCAEQGITPTRSNVVADSSDQVLEGMTTKITKDGVVQ
                     SVVYADTAYMYSERQVALLRRLTATFNDAEGNKSAVLTARKGEYHISRGTLEAWDSVF
                     VRTLDGTNKRLRTNHLIYDRDNNQIRSDSVFFYESPTEILSGNGFTSDPNFKNVVTRQ
                     PRGRQRGEGVPLEERKP"
     gene            2917..>3415
                     /locus_tag="VGA78_00645"
     CDS             2917..>3415
                     /locus_tag="VGA78_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892391.1"
                     /translation="MNFRLATAGLLLYGVPAVAQRTPRAEQRCIIELIGLEREGTRIE
                     VAPGYVNFFGGGNARFRCRNLPIRMRSDSVAIYQETVAQFIGKVRYQDSTVIMSSDFG
                     TYFRDGEKWEARGNVVLQNLKDGTVLRGPSLDYYRQIPGFKDTAEMYAAERPTVTIPV
                     KDSTRA"
BASE COUNT          516 a         1102 c         1243 g          554 t
ORIGIN      
        1 cacggtgagt ggctggtcgt tcggctcggc gccctttctt atcgccgggc cctgtgtggt
       61 ggagtcggac gacgtgatgg cgaccgtggc cgaggcgctg gtccggctgg ccgatgccca
      121 tcggatccgg gtgtgcttca aggcctcgtt cgacaaggcc aaccgggccc ggctggaggg
      181 cgcccgcggt cccggggttg aagaggggct gcgcgcgctg gagcgggtcc gggaccggag
      241 cggcctcccg cttctcacgg acatccatga cgggtcccag gcgttggtgg cggcccaggt
      301 ggtggacgtg ctccagatcc cggccttcct ctcgcgccag accgatctgc tacgggcggc
      361 gggccgcacc ggcaagccgg tcaatatcaa gaagggtcag tggatggatc ccgacgggat
      421 gatcggtgcc gtggagaaag tgcgcgcggg cggctcctcc gagatcgcgg tgaccgagcg
      481 gggcactttt ttcggctacg gcgacctggt ggtcgatatg cgaaacctgc gccggctcca
      541 tgacgccacc ggggtgccgg tgatcttcga tgccacccat tcggtgcaac agccggggca
      601 gggcccgggt ggcggaagcg gcggccagcg ggaacacgtg cccgccctcc tcgccgccgc
      661 cgcagtggcc ggggccgacg ggttctttct ggagacccac cccgacccgg cccgggcgct
      721 gagcgacgcg gccacgcaat ggcccctgga tcgactgccg tggctcttgc atcgcacact
      781 cgatctctgg cggcgggcgc gtgagagcca gggatgagca gcaccgaggc cgcggcacgg
      841 gtgcgattgc tggcgttgga tgtggacggc gtgctcaccg acaacgcggt gtacctcggc
      901 ctggtggacg gccagcgggt cgagatgaag cggttcgata tccaggacgg gttgggtctg
      961 ggcctgctcc ggggtgggcc gatcgaggtg gtgtgggtga gcgggcggct ctcggagtcc
     1021 accactttgc gcgccaccga gctcaaggtg gcggagctga tccaggtcgc agacggccac
     1081 aaagtgccgc ccttcgccga cctgctggcg cggcggggct accactggga tgaagtggcc
     1141 ttcgtgggcg atgatctggc ggacgtcccg gttctcagac gggtcggatt gccgatcgcg
     1201 gtggcgaatg ccatcgacga ggtcaaggcg ctggcgagat acgtcaccca cgcgcccggc
     1261 ggacggggcg cggtgcgcga ggtggtcaca tggcttctcc gacaacggaa cgagtacgac
     1321 tcggcggtgc ggcactacct gggcgcgagg gacgatccgt gaccgatgat ctggtcgcgg
     1381 ccggccgccg caccctggag ctcgaggcga gcgcgctcac ccgggccgcc gggcggctcg
     1441 accgccggtt cggggacgcg gtcgcgctgc tcgccggcgc tctgggccgc gtcatcgtgt
     1501 ccggggtggg caagtccggt ctgatcgcgc gcaagatcgc agcgaccttc acgtcgaccg
     1561 ggaccccggc cagctttctc catccggttg acagcctgca cggcgacctg gggatcgtgg
     1621 ggcgcaagga cgtggcgatc ctggtgagca agagcgggga atcggaggag ctgttcgggc
     1681 tgatcagctc gctccagcga ctcgaggtcc cgatcatcgc gctcaccggg gagcgggcgt
     1741 cgagcctggg tcgggccgcg gcagtcgtgc tcgacgccgg ggtggagcag gaggcttgtc
     1801 ccttgcgcct ggcccccacc accagcacca cggtggcgct ggccctgggt gacgcgctgg
     1861 ccgtggcggt gctcgaggtc aagggtttca cgcaggatga ctttgccgcg ctgcatcccg
     1921 gtggcgcgct gggacgcaag ctcctgcttc aggtgcgcga tgtcatgctg cccgtcggcg
     1981 gcaccgtccg gcccgactcg cccatgcggg atgtggtcat ggcgctggcc catcatcgcg
     2041 gcctcgccat cgtggtggag acggggcggg tggccggcgt gatcagcgcc ggcgacctca
     2101 cccggatcgc cgaacgcgac ggtgatttcc tcgcccttcc ggccgccgag gtcatgaccc
     2161 gaacgccccg gaccaccacc gatgacaccc tggccgccgc cgtcaccggc cagatggagc
     2221 gggtgggcat catggcgatg ccggtgctgg gggaaggcgg acggctggtc ggcgtggtcc
     2281 acctccacga cctgatgcga gcgggggcct tctgaccctc cgccgcccaa ccgcgggttc
     2341 cgggttccgg gttccgggtt ccgggtgcgg tgccgcgtgc ctgctgctgg gggctctttt
     2401 cggcgtcggg tgtgccgaac agggtatcac cccaacccgt tccaatgtcg tggcggatag
     2461 ctccgatcag gtgctggagg ggatgaccac caagatcacc aaggacggag tggtccagag
     2521 cgtggtctac gccgatacgg cctacatgta ttccgagcgt caggtggcct tgctccgccg
     2581 gctgacggcc accttcaatg acgccgaggg gaacaagagc gcggtgctca ccgccaggaa
     2641 aggcgagtat cacatctccc gcggcaccct cgaagcctgg gacagcgtgt tcgtgcggac
     2701 cctggatggg accaacaaac ggctgcggac caaccacctg atctacgatc gggacaacaa
     2761 ccagatccgc tccgactcgg tcttcttcta tgaatcccct accgagatcc tgagcggcaa
     2821 cggcttcacc tccgatccca acttcaagaa tgtggtgacc cggcagccgc ggggacgcca
     2881 gcggggcgag ggtgtgccgc tggaggaacg gaagccatga acttccgact ggcgaccgcg
     2941 ggtctgttgc tgtacggagt cccggccgtc gcccagcgga cgccccgggc cgagcagcgc
     3001 tgcatcatcg agctgatcgg cctggagcgc gaaggcaccc ggatcgaggt cgcccccgga
     3061 tacgtcaact tcttcggcgg cggcaacgcc cgctttcgct gtcgcaacct gccgatccgg
     3121 atgcggagcg acagcgtcgc gatctaccag gagacggtgg cgcagttcat cggtaaggtg
     3181 cgttaccagg attcgaccgt catcatgtcg tccgatttcg ggacctattt ccgcgatggg
     3241 gagaagtggg aggctcgggg caacgtggtg ctgcagaacc tgaaggacgg taccgtcctg
     3301 cggggtccca gtctggatta ctaccgccag atccccgggt tcaaggacac cgccgagatg
     3361 tacgcggcgg aacgtcctac cgtgaccatt ccggtcaagg actcgacccg ggcgg
//
LOCUS       DASWKS010000017         8395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3333303, whole genome shotgun sequence.
ACCESSION   DASWKS010000017 DASWKS010000000
VERSION     DASWKS010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8395
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3333303"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3156)
                     /locus_tag="VGA78_00650"
     CDS             complement(<1..3156)
                     /locus_tag="VGA78_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892392.1"
                     /translation="MRIVLRIAAALAALALVASTSVTTAQQPAPSRLTAALLDSLRWR
                     NIGPEGNRFSAVASIAGNTRIYYAGAASGGIYKTTDGGVHWSAIFDAQPVQSIGSLAI
                     AESDPNIVWAGTGEGKIRSHISVGQGVYKSTDAGATWRLMGLEKTGRIPRTIIHPTNP
                     DIVFVCALGHSYGDQPERGVYRTLDGGATWTQVLFVDQKTGCSDLAIDPSNPRTLFAG
                     MWQFEIHTWGRRSGGPGSGLFVSRDGGATWTRQIGNGLPASPVGKVAVAIARSNPQRV
                     FAAIETGDGIPWEGQPTGTGQLWRSEDGGRRWALINRDRNVMGRAHYYSRLAVSPGDE
                     DEAYFLTASFAKSIDGGSTLVPQSGGRAPGGDHHDIWIDPNNPDRMIVAHDQGLSISE
                     NRGRTWFRQRLTNAQIYHVTVDNAIPYNVLGNKQDEPSYRGPSNSRVPGGRSAGISRG
                     MWHSVGGGESGWATPDPTDPTIVWSTASGSGNVGGIVVRFEENRRQFRNVEVWPHQSN
                     GPAEGVRYRFVWDAPLHISPHDHNTIYTGSQHVHRTQDGGQSWQVISPDLTRNDRSRM
                     GSSGGLTGDNIGVEYSGVVFGIAESPVEKGMIWVGTNDGQVQVTRDNGTTWTNLTKNL
                     PLLPVWGSVRSIAPSRWDAATAWLTVDAHQENNRDPWVYQTTDYGKTWRLIVNGLPKN
                     MLSYAKVIHEDPVRRGLLYLGTENAIYVSFNAGESWLPLQMNLPHAPVSGIVVQPHFN
                     DLVISTYGRGFWILDDITPLQQLTDSVLSKGAHLFAPRAAYRFRPITPPSTTYDDPTV
                     GTDPEYGAAINYYLRAPAKAPPTVAILDGAGQVIRTLTGPNAAGLNRVHWDLRGALSA
                     EVRLFTSPMYAPHIVPGADGRVAPGTGRISILHPPGTYTVRLTVDSVTQTQQLLVRKD
                     PNSAGTEADIAAQIQVVSGLREELNSAASAVSRIESARVQLEALQRLTADSAVRRAAA
                     DMSRKLIDLEMNLVELRLTGAGQDGVRFGSKLISKIGYLANGMSNGDFKPTNQHLEVQ
                     QILSTELRTHLTALNALMTGDL"
     gene            complement(3276..5009)
                     /locus_tag="VGA78_00655"
     CDS             complement(3276..5009)
                     /locus_tag="VGA78_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892393.1"
                     /translation="MMHPLGIALLALQSASGCGDAPAAAQPFAPNLADSARLYRGTFS
                     ADGRTLYYFRKQTPGQEDYRILVSHFRDGAWSPGERLDLGGDFSDLYPSVSPDGRRLV
                     FASYRPAPGDTASAPNAYLWYADRQGNGWGPARFIGNASRFGTYHSGPVIDSSLTIRF
                     HRTSGDWRTQWEMVSRWTPAGYAAAEEPGADDPAAPWRNWRPNRLHVWGGQLSPRGDF
                     TVLGVSPVDSATGRRGPADVWVSLRRGHEWTEPVPAGGEVNRAGYENFVVFHPDGCSV
                     IFVRNFSAFHRVSIDGLLAPARAQRPSSGAPRPQQPERVMPGVVSLEGRNETFPAIDP
                     VDGALWFSVYDQDFGKQTIMRAPRRGSGWAAGEVAPFSGTQGDRAPRFSPDGRRLYFT
                     SNRPAPGHPEGDFNIWMVERHPAGWSAATLVPAPVNSPAGRDIHNVVLPDGSMYLASN
                     RPGGAGRSDIWHIIASGEARHLGAPINDDRSQPDLYVSPDGQWMLLVITDHPAGLGGD
                     DLFISRWSDGAWTAPRPLGAPVNSPEYEYGSSVSPDGRLLYFTSHRGGSADLYVVELA
                     ALGLSISPPRR"
     gene            complement(5019..5480)
                     /locus_tag="VGA78_00660"
     CDS             complement(5019..5480)
                     /locus_tag="VGA78_00660"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892394.1"
                     /translation="MRRTLVVLLSLLPPAGVAAQANPRPAPPPAADSAAVRAAVLDYV
                     EAIYRADTSRILRSVRPELAKRGYFIPRGQSGYTNEPMTFAELLTTARTWNASGRVDA
                     DKAIKEVKILDLLDQTASAKLVAVWGVDYLHLARYDGRWMIVNILWQTPPR"
     gene            complement(5505..7598)
                     /locus_tag="VGA78_00665"
     CDS             complement(5505..7598)
                     /locus_tag="VGA78_00665"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9892395.1"
                     /translation="MNGTAGSLLSIGAASLWLGLLLGAAGFATVRLLPRLGPSRRYRL
                     WYAALLLTLLVPLATQVTPRRATAIAGDDPRPAAGPSPLSPVGLQPGTPDRITAPGGD
                     DMTSASWGWRLTLPAAVIDFGLWVWLLGAGLGLGGLAVEMGRLSRLRRSSRPPPRELL
                     ELWSRAITAVPTGRRLRLLVSDRVGIPMASGWRRPAVIVPVELHRLLPADDVRHLLMH
                     ELAHLARFDDWHVAIQHLARALCWWHPVVRWVTRRLETEREFACDELVAKRGDRRGYA
                     RALVRVAEVGLDHSSGFAPAALRGRLTDRVEALLGRSAETRWSWRRAGSGLALGAMAM
                     SGLWIGPPAVGAGLVASMAPAQSPQDSGTASPERTRGAVGRSLDSLFRTFADSGFSGT
                     VLVAMGNEIVLEQGYGMADRERRIPATATTRYSTAGITKLFTATAILTLEKEGRLSVG
                     DSLTRWVGPLPRAKDRASLHHLLTHSDGLTRLQAPVYRRSAEAFVSAIAATPAAFEPG
                     SGYRYNDFGHSLLGLVVERASGESYESFIRRRFIEPARLRATGFEPDGGEMAVEYAGP
                     AGAQVPVGPRAYSWGRRGSLGLVSTAGDLYRWFRAMEDATILAPAVRARMLVPRMQSD
                     WGAEQGYGWDLEPRPDGRRIWRRVAGTPGFEGELLHDPLDGWTAVILVNSRIGWRFRV
                     WQAIERTVISSGPNR"
     gene            complement(7595..7975)
                     /locus_tag="VGA78_00670"
     CDS             complement(7595..7975)
                     /locus_tag="VGA78_00670"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX9892396.1"
                     /translation="MARSPSPTLTPAELRVMRVLWRIGPAPAADLVAAVRGRRGTKDS
                     TIRTILRILERKGYVRHRVEGRAFVYQAVVAEGDAQRGAVRDLVARFFDNRPERLVLN
                     LLEHRDVNAAELARLRKLVEDDRP"
     gene            complement(8044..>8395)
                     /locus_tag="VGA78_00675"
     CDS             complement(8044..>8395)
                     /locus_tag="VGA78_00675"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HEX9892397.1"
                     /translation="DQKYRALSLLTYSGAYSAMRSFTDHRMIAAEAFPAPAGSLEAAL
                     HQLKRPPSSAGWVVDLRPARTDPGGAWLRRPRPIRHVGFAAYDYGFELNAVLPLEFDG
                     VIFIDRTTPSRLLP"
BASE COUNT         1361 a         2800 c         2912 g         1322 t
ORIGIN      
        1 caggtctccg gtcatcagag cattgagcgc cgtgagatgg gttcggagct cggtcgagag
       61 aatctgctgc acttcgaggt gctggttggt cggcttgaag tcgccgttcg acatgccgtt
      121 ggccaaatag ccaatctttg agatcagttt ggaaccaaac cggaccccgt cctgccccgc
      181 gccggtaagc cggagctcga ccaggttcat ctccagatct atcagcttcc gactcatgtc
      241 cgccgcggcg cgccgtaccg cggagtcggc ggtgagccgc tgtagtgcct cgagctgcac
      301 ccgcgccgat tcgattcggc tcacggcgga tgccgcgctg ttgagttctt cacgcaggcc
      361 gctcaccacc tggatctggg ccgcgatgtc cgcctcggtg ccggccgagt tgggatcttt
      421 gcggacgagg agttgctgag tctgggtcac actatccacc gtcaggcgga ccgtataggt
      481 gccgggagga tgtaggatgg agatccggcc ggttcccggt gccactctgc cgtcggcgcc
      541 cggcacgata tgcggcgcgt acatgggaga ggtgaagagc cgcacctccg cgctcagcgc
      601 gccgcggaga tcccagtgca cccggttgag acccgccgca ttcggcccgg tgagggtgcg
      661 gatcacctgc cccgcgccgt cgagaatggc cacggtcggc ggggccttgg cgggggcgcg
      721 gaggtagtag ttgatcgccg cgccgtattc gggatcggtg ccgacggtgg gatcgtcgta
      781 ggtggtggag ggcggggtga tgggacggaa gcggtaggcg gcccggggcg cgaagaggtg
      841 agcgcctttg ctcagcacgg aatcggtcag ctgctggagc ggggtgatgt cgtccaggat
      901 ccagaagccc cggccgtagg tcgagatcac caggtcgttg aaatgcggct gcaccacgat
      961 ccccgacacc ggggcatggg gaagattcat ttgcagcggg agccagctct cgccggcgtt
     1021 gaaggaaacg tagatcgcgt tctcggtgcc gaggtagagg aggccccggc gcaccggatc
     1081 ctcgtggatc accttggcgt agctcaacat gttcttgggc agaccattca cgatgaggcg
     1141 ccaggtcttg ccgtagtcgg tggtctggta gacccacggg tcgcggttgt tctcctggtg
     1201 ggcatccacc gtgagccagg cggtggcagc gtcccagcgc gagggcgcga tggagcgtac
     1261 cgatccccac accggaagca gcggcaggtt cttggtgaga ttggtccagg tggtcccgtt
     1321 gtcgcgggtg acttggacct gcccgtcgtt ggtgcccacc cagatcatgc ccttctccac
     1381 cggcgattcg gcgatgccga agaccacgcc ggaatattcg accccgatgt tgtctccggt
     1441 cagtccgccg gagctgccca tgcggctccg gtcgttgcgg gtgaggtcgg gcgagatgac
     1501 ctgccagctc tggccgccgt cctgggtgcg gtggacgtgc tggctcccgg tgtagatggt
     1561 gttgtggtcg tggggagaga tatgcagcgg cgcgtcccac acgaagcgat agcggacgcc
     1621 ttccgcgggt ccgttggact gatggggcca cacctccacg ttcctgaact gccgccgatt
     1681 ctcctcgaac cggaccacga tgccgcccac attgccggag cccgacgcgg tggaccagac
     1741 gatggtggga tcggtaggat ccggcgtggc ccagccgctc tcgccaccgc ccaccgagtg
     1801 ccacatccct cggctgatgc cggcgctccg gccgccgggc acccggctgt tactcgggcc
     1861 gcgatagctg ggctcgtcct gcttgttgcc caggacgttg tagggaatcg cattgtccac
     1921 ggtgacgtga tagatctgcg cgttggtgag ccgctggcgg aaccaggtcc tgccgcggtt
     1981 ttccgagatc gaaagcccct ggtcgtgggc gacgatcatc cggtcgggat tgttggggtc
     2041 gatccagatg tcgtgatggt cgcccccggg ggcgcggccg ccgctctggg gtacgagggt
     2101 gctcccgcca tcgatggatt tggcaaagga ggcggtgaga aagtaggcct cgtcttcgtc
     2161 gccgggcgag accgccaggc gggagtagta atgggctcgg cccatgacgt tgcggtcgcg
     2221 gttgatcagc gcccagcgcc gcccgccgtc ttccgagcgc cagagctggc cggtgccggt
     2281 aggctggcct tcccagggaa ttccatcgcc ggtttcaatc gccgcgaaga cccgctgggg
     2341 attggacctc gcgatggcga cggcgacctt gccgaccgga ctggcgggga ggccgttgcc
     2401 gatctggcgg gtccaggtgg cgccgccgtc gcgggagacg aagagtccgg agcccgggcc
     2461 gccgctccgg cgcccccagg tgtggatctc gaactgccac attcccgcga agagcgtgcg
     2521 ggggttcgaa ggatcgatag ccagatcgga gcagccggtt ttctgatcca cgaagaggac
     2581 ctgggtccag gtggcgccgc catcgagcgt gcgatagaca ccgcgctccg gctgatcgcc
     2641 ataggagtgg cccagggcac agacgaacac gatgtcgggg ttggtggggt ggatgatggt
     2701 gcgggggatg cggccggtct tctcgagccc catcagcctc caggtggcgc cagcgtcggt
     2761 ggatttgtag accccctgcc cgaccgagat gtggctccgg atctttcctt ccccggtgcc
     2821 ggcccagacg atgttcggat cgctctccgc gatggcaagg gagccgatcg attgcaccgg
     2881 ctgcgcgtcg aaaatggccg accagtgcac cccgccatcg gtggtcttgt agatgcctcc
     2941 ggaggcggcg ccggcatagt agatccgggt gttgcccgcg atactggcga cggcgctgaa
     3001 gcggtttccc tcggggccga tgttccgcca gcggagcgaa tcgagcagtg ctgcggtaag
     3061 ccgcgacggc gccggttgct gcgcggtggt gacgctggtg gaggcgacga gggccagggc
     3121 ggcgagtgcg gccgcaattc gcaggacgat gcgcatggga tgctccggat gtatgtcggc
     3181 ggacgccgga agctaacagt ttacccctcg atgtctccgt ccgcccgtcc gcccgtccgc
     3241 ccgtccgccc gtccgcccgc ctgcccggcc gccctctagc ggcgcggcgg tgagatcgac
     3301 agacccagcg ccgccaactc gacgacatac aggtccgcgc ttccgccccg atgactggtg
     3361 aagtagagca acctgccatc cggtgacacc gatgagccgt actcatactc cggcgagttg
     3421 accggcgcgc ccagcggcct gggagcggtc cacgctccat cgctccagcg actgatgaag
     3481 aggtcatccc cgccgaggcc ggccggatgg tcggtgatca cgagcagcat ccattgtcca
     3541 tcggggctga cgtagaggtc gggttgagaa cgatcgtcgt tgatcggcgc gcccaggtgc
     3601 cgggcctcgc ccgaggcgat gatgtgccag atgtccgacc ggcccgcgcc tccgggacgg
     3661 ttggacgcga ggtacatgct cccgtccggg aggaccacgt tgtgaatgtc gcggccggcg
     3721 gggctgttga ccggggccgg gaccagcgtg gcggcgctcc atccggccgg gtggcgttcc
     3781 accatccaga tattgaagtc gccctcggga tggcccggtg cggggcgatt cgacgtgaaa
     3841 tacagccgcc gcccgtcggg tgagaaccgg ggggcacggt ccccctgcgt tcccgagaac
     3901 ggcgccactt cgccggccgc ccacccgctg cctcgcctgg gagctcgcat gatggtctgc
     3961 ttgccgaagt cctggtcata caccgaaaac cagagtgcgc catccaccgg atcgatggcc
     4021 ggaaaggtct cattgcggcc ttccaatgac acgacccctg gcatgacccg ttccggctgc
     4081 tgcggccggg gcgccccgct cgacggtcgc tgggcccgag ccggtgccag cagcccgtcg
     4141 atcgataccc ggtggaacgc gctgaagttt cgcacgaaga tcaccgagca gccgtcggga
     4201 tgaaatacca cgaagttctc atagcccgcg cggttcactt cgcccccggc tggcaccggc
     4261 tcggtccact catgaccccg gcgcagtgac acccacacgt ctgccgggcc tcgccggccg
     4321 gtcgcggaat cgacggggga cacgcccagc acggtaaagt cgccccgggg tgacagctgt
     4381 ccgccccaaa cgtgcagccg gtttggcctc cagttgcgcc acggtgcggc cggatcgtcc
     4441 gctcccggtt cttccgcagc cgcgtatccc gccggggtcc agcgggagac catttcccat
     4501 tgggtccgcc agtcgcccga ggtacggtgg aaccggatcg tcagggagga atcgatcacc
     4561 ggaccggagt ggtaggtgcc gaaccggctc gcgtttccga tgaagcgggc cggcccccag
     4621 ccgttcccct gccggtcggc gtaccagaga taggcgttag gcgcgctggc ggtatcgccc
     4681 ggcgccggac ggtaggaagc gaacaccagc cgccgtccgt cgggactcac cgacggatag
     4741 agatcggaga aatccccacc cagatccagc cgctcacccg gcgaccacgc cccatcacgg
     4801 aaatgggaga ccaggatccg gtagtcctcc tgtcccggcg tctgtttgcg gaagtagtac
     4861 agggtgcggc catcggcgct gaaagtcccg cgatagaggc gggccgaatc cgccagattc
     4921 ggagcaaagg gctgcgccgc cgcaggtgcg tcgccgcagc cggaagcgct ctgcaatgcg
     4981 agcagagcaa tgcccagggg atgcatcatc tccctccatc agcgcggcgg tgtctgccac
     5041 aggatgttca cgatcatcca gcggccatcg tagcgggcca gatgcaagta gtcgacgccc
     5101 cagacggcca ccaacttggc gctggcggtc tgatccagga ggtccaggat cttcacttcc
     5161 ttgatcgcct tgtcggcgtc gacccggccg ctcgcattcc aagtgcgggc ggtggtcagc
     5221 agctccgcga acgtcatcgg ctcgttggta tagccgctct gcccccgggg aatgaagtag
     5281 ccgcgcttag ccagctcggg ccgcacgctc cggagaatgc ggctggtgtc ggcccggtag
     5341 atcgcctcga cgtaatcgag caccgcggcc cgaaccgccg cggagtccgc cgccggcggt
     5401 ggagccggac gggggttcgc ctgtgcagcc accccggccg gcggcagcaa cgacaacagc
     5461 accacgagtg tccgcctcat gatcggtcct tttctgttaa ggaattaacg gttcggtccc
     5521 gaagaaatca ccgtgcgctc gatggcctgc cacacccgga agcgccagcc gattcgcgaa
     5581 ttcaccagga tcaccgcagt ccacccgtcg aggggatcgt gcagcagctc gccttcgaag
     5641 ccgggcgtac ccgccacccg gcgccagatc ctgcgtccat cgggccgcgg ctccagatcc
     5701 cacccgtacc cctgctcggc gccccagtcg gattgcatcc ggggaaccag catcctcgcc
     5761 cgaacggcag gagccaggat ggtggcatcc tccatggcgc ggaaccagcg atagagatcg
     5821 ccggccgtgc tcaccagacc gagcgatccc cgacggcccc agctgtaggc ccggggtcct
     5881 actgggacct gggcaccggc cggtccggca tactcgacgg ccatctcgcc gccatcgggc
     5941 tcgaagccgg tcgcccggag ccgggccggt tcgatgaagc gccgccggat gaaggactca
     6001 taggattccc cagaggcccg ctccaccacg aggccgagca ggctgtggcc gaaatcgttg
     6061 tagcggtagc cggagcccgg ctcgaacgcc gccggagtcg ccgcgatcgc gctgacgaat
     6121 gcctcggccg accggcgata taccggcgcc tggaggcggg tcagtccatc ggaatgggtg
     6181 agcaggtggt gcagggatgc tcgatccttg gcccggggca ggggaccgac ccagcgggtg
     6241 agcgagtcgc cgacgctcaa ccggccttcc ttctccaaag tcaggatggc ggtcgcggtg
     6301 aacagcttgg tgattcccgc ggtgctgtag cgggtcgtcg cggtggcggg gatccgccgt
     6361 tcccggtcgg ccatgccgta gccctgctcc agcacgatct cgtttcccat ggccacaagg
     6421 acggttccag aaaagccgga gtccgcaaat gtcctgaaca ggctgtcgag cgaccggcct
     6481 accgcgccgc gggtgcgctc cggggaggcc gtgccgctgt cttgcgggga ctgggccggt
     6541 gccatcgacg ccaccaggcc ggcaccgacc gcggggggac cgatccacag acccgacatc
     6601 gccatcgcgc ctaacgcaag cccggacccg gcgcgccgcc agctccaccg ggtttcggcc
     6661 gagcgcccca gcagcgcctc gacccgatcg gtcagccgcc cccgcagcgc ggccggcgcg
     6721 aatccgctcg agtgatccaa tcccacctcg gctacccgaa ccagggcccg ggcgtagcct
     6781 cgccggtccc ctcgcttggc caccagctca tcgcaggcga actcccgttc ggtctccaat
     6841 cgccgagtca cccatcgcac caccgggtgc caccagcaga gcgcccgggc caggtgctgg
     6901 atggccacgt gccagtcgtc gaagcgggcc aggtgggcca gctcgtgcat gagcagatgg
     6961 cgcacgtcat cagcgggcag caaccggtgc agctccaccg gcacaatgac ggcgggacgg
     7021 cgccagcccg aggccatcgg gatcccgacc cgatccgata ccagcagccg gaggcggcgg
     7081 ccggtgggaa ccgctgtgat cgcccggctc cacagctcga gtagctcgcg cggcgggggg
     7141 cgcgaggaac gccgcaaacg ggacagccgt cccatttcca ccgccagacc gcccaggccg
     7201 agcccggcgc ctaacagcca gacccagaga ccgaagtcga tcacggccgc cggcagggtg
     7261 agtcgccatc cccatgaggc ggaggtcatg tcgtccccgc cgggagcggt aatgcgatcc
     7321 ggggtacccg gctggagacc gacaggagac agtgggctag gcccggccgc cggcctcggg
     7381 tcatccccgg cgatcgcggt ggcgcggcgc ggagtgacct gggtcgccag cggcaccagc
     7441 agggtgagca gcaacgcggc ataccagagc cgataccggc ggctgggccc gagacggggc
     7501 aacagcctga cggtggcgaa gcccgccgca ccgagtagca ggccgagcca gagactcgcg
     7561 gctccgatcg agagcagact cccggccgtt ccgttcacgg ccgatcgtcc tcgaccagct
     7621 tgcgcaagcg cgccagctcg gccgcattga cgtcgcggtg ttcgagcagg ttgaggacca
     7681 gccgttccgg ccggttgtcg aagaaccggg ccaccagatc tcgtaccgcc ccgcgctgcg
     7741 cgtctccctc ggccacgacg gcttgataga cgaaggcccg gccctcgacc cggtgccgca
     7801 cgtacccctt gcgttccagg atccggagga tggtgcggat ggtgctgtcc ttggtccccc
     7861 gccggccccg aaccgcggcg accaggtcgg ccgccggggc gggcccgatg cgccacaaca
     7921 cccgcatcac ccgcaactcg gcgggcgtta gtgtggggga gggagaacgg gccatggaca
     7981 gacgatagga cccgaaggcg gggctgtcaa ctaaagaatt aacagaccgc tgtttcggtg
     8041 ctgctacgga agcaaccggg atggtgtggt acggtcgatg aagatgactc catcgaattc
     8101 cagcggaagg accgcgttga gctcgaagcc gtaatcgtag gcggcgaaac caacgtgtcg
     8161 gatcggccgg gggcgccgaa gccatgcccc gcccgggtcg gtgcgggccg gcctcaagtc
     8221 gaccacccac ccggcactcg acggcggccg tttgagctgg tggagggctg cttcgagact
     8281 gccggccgga gccgggaacg cctccgcggc gatcatgcga tggtcggtga agctccgcat
     8341 cgcgctgtac gcgccgctgt acgtgaggag gctcagggcc cggtacttct ggtcg
//
LOCUS       DASWKS010000018         4453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2965009, whole genome shotgun sequence.
ACCESSION   DASWKS010000018 DASWKS010000000
VERSION     DASWKS010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2965009"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1306
                     /locus_tag="VGA78_00680"
     CDS             <1..1306
                     /locus_tag="VGA78_00680"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9892398.1"
                     /translation="GRHEYGAERLNGTSATPVSAPQELSERGAGLTLTHAPSPHWRQT
                     LIAGHHWISGEREPATSLLLTPRLPLGATHETAWRSSVRYSSTFEAPIGGHEGSLAAG
                     AEYSRRHVERAERRLASSRDLRPLYDEDLKSTGGFGQVRLRLGTGLILSGGTRAEWPS
                     SVGENSGPSWASTAGATWSHPVGRSLLRLRAAWGRGIRPPEPGMSRAMAATGIRQEAN
                     PELAPETQTGVEAGVEVHLNDAFVARATWYHQQAEDLIQQVPLRTDGTERVYQFQNLG
                     AIRNRGVELEAGLHRGPLTATGALYLNRSTVSRLAPSYSGFLRPGDELPEIPEGVGAL
                     RLRYQAGRVSAEVGGSWLGSWIGYDWAAALGTEPARASDRDYWIEYSGGLRPWIATWL
                     TLGGEWRAFARIDNPGNTVEGVRTNVSPPIGRSAVVGVELKP"
     gene            1449..3107
                     /locus_tag="VGA78_00685"
     CDS             1449..3107
                     /locus_tag="VGA78_00685"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9892399.1"
                     /translation="MTLLSAAALVAAAPLYAQGSDNRAARMDSIFTAVDRTGTPGCAA
                     GAVQNGRFLHARGYGMADLERGAPITPQSVFYMGSVSKQFTAMSVALLSKDGTLSLDD
                     PARKYLPEIPEAGAAITIRHMVHHMSGLREKWDLLLLSGYRAGNLVVQQDVLDLVKQQ
                     RALNFPPGTDHLYNNTAYDLLANVVQRASGKSLREFAAERIFRPLGMTRSLYVDDRTL
                     LIPGRAAGYSTGGGRITVDNPNVETVGSGSVYSTLEDMARWDESFYTGSLGGEDLLRL
                     VQTPGKLNDGTPLTYAFGLVVDSWRGQRRVQHGGALAGFRTQITRFPEQHFSAIVLCN
                     FAQANPAMFADRIAEVYLAEKLAAAPARPARSAERPAFENAELAGRAAGIYRSTRSGA
                     VIRLEQEGPALLYVMGSLKLPLTASGPDRARIPSPFDGDLLFDGPAGKPVTGFQRNGE
                     PPHESYRRAGAPVTTPAALGALTGQYRSPELGVTWTIALKDTALIATAVQGREVKLMP
                     AFQDGFTLEGSTVEFVRDGRGRVVALLLTPGRSRNLRFERAAGR"
     gene            3153..>4453
                     /locus_tag="VGA78_00690"
     CDS             3153..>4453
                     /locus_tag="VGA78_00690"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9892400.1"
                     /translation="MADPALIADRYEVIRPLGQGSFARTLLARDLRLDREVAIKVLHP
                     RTDDGLKAYELFEREAAVLRELRHPAIPAIHASFRAPWEGAEAAFLVMEYVEGTSVAE
                     WIADRRHLDTEVVLHLLVELLGVLDYLHTRMPPVLHRDIKPANLIIRSGESPALVDFG
                     SVRNVFRAPDEHGSTVAGTYGYMPYEQYMGQASPASDLFALGATFLHLLTGRAPPEFL
                     SAAGRLEVPPTLPCGEPLRSVLTRMLAPAPSDRFQSAREVRAALLAGSTLSQNLPTLL
                     SNAPRVHPVASLGSVPREMTGAAADLLKRTAYTPLQLMNTKDRRAEGLDPLDIVLVVF
                     FSVLTVGILPAVFWGTYRGRKRRLKPFFVRGIPGTGKVIDKAREEIGFGEKLVRVRYT
                     FEADGERHRGSDQVLPLIADWWEPGEIINILYLPDRGYDSM"
BASE COUNT          706 a         1507 c         1555 g          685 t
ORIGIN      
        1 cgggcgacat gagtatggtg ccgagcggct caacgggacc agcgcaacac cggtgagcgc
       61 gccgcaggag ctctccgagc ggggagcggg tctcaccctg acgcatgcgc cgtcgccgca
      121 ctggcgccag accctgatcg cgggccacca ctggatcagc ggcgaacgag agccggcaac
      181 gtccctgctg ctcacgccac gcctcccgct cggcgccacc cacgagaccg cgtggcgcag
      241 ctcggttcgc tacagcagca cgttcgaggc gccgatcggc ggccacgaag gatctctggc
      301 tgccggcgcc gagtacagca ggcggcacgt ggagcgggcc gagcgtcgcc tggcgagcag
      361 ccgcgacctg cgtccgcttt acgatgaaga cttgaagtcc accggtgggt tcggccaggt
      421 gcggctccgg ctcgggaccg ggctgattct gagcggcggc acccgggccg agtggccttc
      481 gagcgtgggc gagaactcag gcccgtcctg ggcttcgacc gcgggagcaa cctggagcca
      541 tccggtgggc cggtcgttgc tgcggctgcg ggccgcctgg ggccggggca tccggccgcc
      601 cgaaccaggg atgagccggg ccatggcggc aaccggtatc cggcaggagg ccaacccgga
      661 attggcgccc gaaacgcaaa ccggggtcga ggcgggtgtc gaagtgcacc tgaacgacgc
      721 cttcgtcgcc cgggccacct ggtaccacca gcaggccgaa gacctcatcc aacaggtgcc
      781 gctcaggacc gacgggaccg agcgggtcta tcaattccag aacctgggcg ccattcggaa
      841 tcgcggcgtg gagctggagg ccggcctgca ccgcgggccg ctcaccgcga ccggcgcgct
      901 gtacctcaac cggagcaccg taagccggct ggccccgagc tacagcggct ttctgcgccc
      961 gggggacgaa ttgcccgaga tccccgaagg cgtgggagcg ctccggctcc gctaccaggc
     1021 cggacgtgtg agcgcggaag tgggcggctc ctggctcggc tcctggatcg gctatgactg
     1081 ggccgcggca ctggggaccg agccggcccg agcgagcgac cgggattact ggatcgaata
     1141 cagcggcgga ctccggccct ggatcgcgac ctggctcacg ctggggggtg aatggcgggc
     1201 gttcgcgcgg atcgacaatc ccggcaacac cgtcgaagga gtccgaacca acgtgtcacc
     1261 gcccatcgga cggtcggcgg tggtaggggt ggagctcaaa ccctgaactg cggggagcag
     1321 ggagcaggga gcagggagca gggagcgggg agccgggagc agggaggcgg gagaggggtg
     1381 ggaggcggtt gaagcggcgg gcgagtacct tccggagtca ttctcacaac agctttcata
     1441 tgaaccggat gaccctgctt tctgcggcgg cgctggtcgc ggccgctccg ctctacgccc
     1501 aggggagcga caaccgggcg gcccgcatgg actcgatctt caccgcggtg gatcgcaccg
     1561 ggacaccagg ctgcgccgcg ggagcggtgc agaacggccg cttcctgcac gcgcgcggct
     1621 acggtatggc cgacctggaa cgaggcgcgc ctatcactcc ccagtcggtg ttctatatgg
     1681 ggtcggtgtc caagcagttc accgcgatga gcgtggcgct gctgtcgaag gacggcacgc
     1741 tctcgctgga cgatccggcc cggaagtacc tcccggaaat cccggaagcg ggcgcggcca
     1801 tcacgatccg ccacatggtg catcacatga gcgggctccg ggagaagtgg gacctgctgc
     1861 tgctctcggg ttaccgcgcc ggcaatctgg tcgtccagca ggacgtgctc gatctggtga
     1921 agcagcagcg ggccctcaat ttcccgcccg gcaccgatca cctgtacaac aacaccgcct
     1981 acgacctgct ggccaacgtg gtccagcggg ccagcggcaa gtcgctccgc gaattcgccg
     2041 cggaacggat ctttcggccc ctcggcatga cccgcagcct gtacgtggac gatcggaccc
     2101 tcctgattcc cggccgggcg gcgggttatt cgaccggggg cggacggatc acggtggaca
     2161 atcccaacgt ggaaaccgtc ggcagcggaa gcgtctactc cacgctggag gacatggccc
     2221 gctgggacga gagcttctac accggctcgt taggcgggga ggacctgctg cggctggttc
     2281 agacgccggg gaaactcaac gacggcacgc cgctgaccta cgccttcggc ctcgtggtgg
     2341 acagctggcg gggacaacgc cgggtgcagc atggcggggc cctggccggc tttcgcaccc
     2401 agatcacccg gtttcccgag cagcacttct cggccatcgt gctctgcaac tttgcccagg
     2461 ccaatcccgc gatgttcgcc gaccggattg ccgaggtgta cctggctgaa aagctcgcgg
     2521 cggcgccggc ccgcccggcc cgttccgccg agcggcccgc gttcgagaac gccgagctgg
     2581 cggggcgggc tgcggggatc tatcggtcga ccaggagcgg ggccgtcatc cggctggagc
     2641 aggaaggacc ggccctgctg tacgtgatgg gctcgttgaa gctgccgctg acggcatccg
     2701 ggcccgaccg ggcccggatc cccagtccgt tcgatgggga tctgctcttc gacggccccg
     2761 ccgggaaacc ggtgaccggg ttccagcgga acggtgagcc gccgcatgag agttatcgac
     2821 gggcgggcgc cccggtgacg acccccgcgg cactgggtgc cctgactggg cagtatcgca
     2881 gcccggagct cggcgttacc tggaccatcg ccctcaagga caccgccctg atcgcgaccg
     2941 ccgtgcaggg ccgcgaggtg aagctgatgc cggcgttcca ggacggcttt acgctcgaag
     3001 gatcgacggt cgagttcgtg cgtgacggac gaggccgggt ggtggcgttg ctgctgacgc
     3061 cgggccgaag ccgcaacctc cgcttcgagc gggccgcggg ccgatagcgg cgggacctcg
     3121 cgcccgcgtg gtccgcccgg catgttatgg gcatggccga ccctgccctc attgcggacc
     3181 gctacgaggt catccgaccg ctggggcagg gctcgttcgc ccgaaccctg ctggcgcgcg
     3241 atctccggtt ggatcgcgaa gtggccatca aggttctgca tccccggacg gacgatggcc
     3301 tgaaggccta tgagctgttc gagcgggagg cggcggtcct ccgggaattg cgccatcccg
     3361 ccattccggc gattcacgcc tccttccggg cgccgtggga gggggccgag gccgccttcc
     3421 tggtcatgga gtacgtcgag gggacctcgg tggcggagtg gatcgccgac cggcgtcatc
     3481 tcgacaccga agtggtcctg cacctgctgg tcgagctgtt aggcgtgctc gactacctcc
     3541 acacccggat gccgccggtg ctgcaccggg acatcaagcc ggccaacctc atcatccgct
     3601 ccggggagtc ccccgcgctg gtcgacttcg gctcggtccg aaatgtgttt cgcgcccctg
     3661 atgagcacgg ctccaccgtc gcgggcacct atggctacat gccgtacgag cagtacatgg
     3721 gacaagccag tcccgcgagt gacctcttcg ccctcggcgc cacctttctt cacctgctga
     3781 ccggtcgcgc cccgccggag ttcctgagtg ccgccggccg gctcgaagtc ccccccaccc
     3841 tgccctgcgg tgaacctcta cgctcggtcc tgacccggat gctggccccg gcgccctccg
     3901 accggttcca gtcggcgcga gaggtgcggg cagccttgct cgcggggtcc acgctctccc
     3961 agaacctgcc tacgctcctc tccaacgcac cccgggtaca tccggttgct tcgctgggct
     4021 cggtccctcg agagatgacc ggggcggcag ccgatctgtt gaaacgcact gcctacactc
     4081 cgttgcagct gatgaacacc aaggatcgtc gcgccgaggg actcgatccc ctggatatcg
     4141 tgctcgtggt cttcttctcg gtgcttaccg tgggaatcct gccggcggtg ttctggggca
     4201 cctaccgcgg ccgaaagcgc cggctcaaac cgttcttcgt ccgcggcatt cccgggaccg
     4261 gcaaggtcat cgacaaagcg agggaggaaa tcggcttcgg cgagaagctg gtgcgagtgc
     4321 gctacacgtt cgaggccgac ggcgaacggc accggggctc cgatcaggtc ctgccgctca
     4381 tcgcggactg gtgggagccg ggtgagatca tcaacatcct ctacctcccc gatcgcggct
     4441 acgacagcat gat
//
LOCUS       DASWKS010000019        12816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3333630, whole genome shotgun sequence.
ACCESSION   DASWKS010000019 DASWKS010000000
VERSION     DASWKS010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12816
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3333630"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1796
                     /locus_tag="VGA78_00695"
     CDS             <1..1796
                     /locus_tag="VGA78_00695"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9892401.1"
                     /translation="MRGLQNLAAIALPKSGVPLDQVIADLDLVASRLEAEYPDFNTNL
                     TVRPAGLLDGPVARVGPALYVLLGAVGFLLLLACANVSNLLLARSVARGREVAIRAAL
                     GAARGRMLRQFVTENLFLAAAGAGVGVVLAIALKGTVLALAPDGLPRMDDITLDWRVF
                     GIIFGVMVVVGLGLGGVSAAHLTIADGMEDLRDGARSGGGPRARRFRQALTALEVALS
                     VMLLVGAVTLGRTFLNLRRIEPGFDPASVLTARVVQPFRMTSFEGFGRMIPVWARFQR
                     SLIEQVESIPGVRAAAVASTLPLTGAWESTGFSIEGKPAPTPGNPYTAFFAGVSEGYF
                     SALRVPVIRGRTFSRADPDSVPVAVISETLARAYWPNEDPLGQRIRVFGDFPLQIVGV
                     VGDVRQRQLGSEPERMLYLPPSVYTGPSVTLVVSTTGAPLSIVPTVRERLRALDRGTP
                     LTAVASMEDILAESLAQQRFSATLLGVFSTAALALAVLGLYSVISFGVARRAREFGVR
                     LALGAHPGRVQRMVLREGLTLSLVGVGAGVAGAAALSRVVSGLVYGASTTDPATLLGV
                     AALLTTVTLIATLVPARRAMTVDPAVVLREE"
     gene            complement(1805..3916)
                     /locus_tag="VGA78_00700"
     CDS             complement(1805..3916)
                     /locus_tag="VGA78_00700"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX9892402.1"
                     /translation="MTTHPVQLEGFRELLDAVPDAVVVVDPLGSVVALNRQAEGLFGW
                     TEAELLGQPLNRLIPPRFQQVSELLDLSGGGPPEIPPQGGPVSLFARRRDGSEFPVEF
                     NRSPLGPGTDAPVLVAIRDLTKWRRAQETLFREKEQASVTLASIADAVITTDLASTIT
                     YLNPTAERLTGWRMAEALGQPLATVLTLISDSTRQPIESIPARCLQEGRAVDLPNGVL
                     LLRRDGTEVAIGDSAAPLRDRNGATIGVVLVFHDVTERRRAARELSHEATHDALTGLV
                     SRKEFERRLARVLANVAAGAAEHALCYLDLDRFKLVNDTCGHEAGDDLLRTIGRLLGA
                     RLRSRDTAGRLGGDEFGILLEHCSLSKAEEIAGNLQRAIQDLQFVWGESSFSLGVSIG
                     VIPITAASGRTADVLRAADQACYAAKNAGGNRVELAPIKAAPGVRQQVELRHVTHLTR
                     AVDEGSFQLYAQAIVPLAEPRARPRCEILLRLRDEHGGVELPDSFLLHAERYRLMPAI
                     DRWVVRQTVALLGQWHRDHPQCELPLCSINLSVSSLDDADLVAEVREYLVQHRLPPET
                     LCFEIAEAAALGNFSQLVRLISEIRATGCGVGLDGFGNSLPSFVHLKALSLDFVKIAG
                     HYVRGVIEDPVYGTLVSTVNEIGRIMGIATIADEVENETILERLRVLGVGYAQGHAVA
                     PPAPLADQEGEAILPCVQRSG"
     gene            complement(4908..5267)
                     /locus_tag="VGA78_00705"
     CDS             complement(4908..5267)
                     /locus_tag="VGA78_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892403.1"
                     /translation="MTFKSAFWSPIVVGLSVINFVALGFAVGSAEPWHAAGHAALALG
                     FGVWAQRLRQGRGGREPAGMKQQLEQQAGALEDAQTTLADQSAQLAELQERLDFAERL
                     LAQGRDRQALGTRDQRE"
     gene            complement(5303..5767)
                     /locus_tag="VGA78_00710"
     CDS             complement(5303..5767)
                     /locus_tag="VGA78_00710"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9892404.1"
                     /translation="MQLIQDLEATRDETLQYFTLGEKDLARTYAPGKWAIRFILHHLA
                     DSETVFNDRIRRVLSEPRQVLWVYDQDAWARGLDYAHVPLELSRRVYESVRSAIIYFA
                     GLHYENNGHLEFVHSTTGVRTLKDELDKVASHNAHHLNQIRTALGVASRPDA"
     gene            complement(5836..8517)
                     /locus_tag="VGA78_00715"
     CDS             complement(5836..8517)
                     /locus_tag="VGA78_00715"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9892405.1"
                     /translation="MIDRVLSHYRIIQELGAGGMGVVYLAEDVRLGRRVALKLLPPEH
                     TQDEDRLRRFKQEARAASALNHPNILTIHEVGEEDGHHFIVTEFIDGESLRAALHRTG
                     SLTFSQALSVATQVASALAAAHEAGIVHRDIKPENIMLRRDGYVKVLDFGLAKLTETL
                     APHGGDASTLAPSVALHTEPGMVLGTTQYLSPEQAAARDVDARSDIFSFGAMLYEMVT
                     GQAAFQGASAMETVAAILAQEPRPLPASIHPELSKVILRCLRKDPARRHQTMADLKVA
                     LEDVQEESKSGRRVQQVRLRRRLVGALVLALGLVGGIFAWRDWATPRSAEPLQAVPLT
                     TLPGVQRYPSFSPDGEHVAFTWNGPRQDNPDIYVQQIGSAQPLHLTSDAGNDFNPVWS
                     PDGRWIAFLRSQSEPNRSELRLIAPLGGPERKLAEVRLLGSLDITPPYLAWCPDGTCL
                     VVTDSPGEGHPNALFAFSLESAERRQLTHPQPPAGGDSHPAVSPDGRWLVFRRMAGLF
                     VGELYRLPLGPGVTAAGEPERLTLAALNAEHPAWMPDSKEILFSAKSSLWRLSVSGEN
                     APARLPFVGDYGLMPAVSRPQPGRPLRLVYIRSFLDGNIWRVETAAPGATASTPPVVA
                     ISSTRLEDMPQFSPDGRRVAFTSDRSGNWEIWLTDPDGANAVQLTSMGAVAAGYPHWS
                     PDGQQIVFHSNVDGQWEVYLVPAAGGKPRNLTSHPAHDAKPRFSRDGKWVYFNSARTG
                     EQHQSVWKVPASGGSAVQVATGAGYAPQESPDGESIYYVEAIDKPSPLWRLPRSGGAP
                     VKLLEGILLANFAVLTGGIYYIDQPSGQVGTHYVDQPTGETRLRYFDFATRKVTTVAR
                     NLGSVDLPLTVSSDGRTILFPRLDASTNDLMLVSNFR"
     gene            8862..10892
                     /locus_tag="VGA78_00720"
     CDS             8862..10892
                     /locus_tag="VGA78_00720"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional serine/threonine-protein
                     kinase/formylglycine-generating enzyme family protein"
                     /protein_id="HEX9892406.1"
                     /translation="MSNLGDQVQAALGDAFRVQAELPAGGMSRVFLAVESSLNRRVVV
                     KVLPPELTSDVSAARFRREAELLAQLQHPHILPIISSGSRGGLLYYIMPYVQGESVRH
                     RLEREGMFPVEDAIRVVTEVVDALSYAHAAGVLHRDIKPENILLEGRHAVLADFGVAR
                     ALQQSQTGGRLTATGMSVGTPGYMSPEQVSGDSVDARADLYALAVVGYEMLTGKPPFS
                     GPTAQAVLAAHLTTPPLPVEELRPEVPLHVSRAIARALSKRPEDRFESAGTFRDALEG
                     REIAPATAPALPLPGRWLRRRTLGILLAVSVALAVVAVLWRRGTGIDPGLLGIIRATA
                     DSGWVDEIARLLDSGGVAPDHPVLRETLARFTGRLAVEVEPRSALVEIVRVEPIQSFS
                     GRGFRPVGATQRVAVLAGEYLLRGSAPGFQERMTLVQVAADSSAEVALRLLPSDSALG
                     PRVQVPAGSSPVGGEVGPLLISRFEVTNEEYLGFVSAGGYRDRSLWPDRMWFGDQGQP
                     WDQAVTRFVDRTGLPGPRTWESGRYPVAKATHPVAGITWYEAAAYAKWVGGQLPTAAA
                     WWRASLGAVVRPYPWGTSGTAVHLRANLEGVETATVGSYPLSVSPFGAMDMAGNVREW
                     LADSAGATHRFTAGGSWQEPVYTAGLEWVERFPPGYTSTALGFRVMWREAEP"
     gene            10889..11830
                     /locus_tag="VGA78_00725"
     CDS             10889..11830
                     /locus_tag="VGA78_00725"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9892407.1"
                     /translation="MRRSTRGILRLVTIAVVGLAPILGAQVRPEGDEWLKQPVDDRTF
                     ATFLTFFDYDAKRPLDIRVAKVEDSEGIRSELLSYESAAGIRVTARLYHAPGAVPGGP
                     GLVFLHGGTGVGKDSPGLRQLCDHLARAGFTVLAIDLQYFGERATELLREFTEEEKHQ
                     KLYNQPGTYLAWVTQTVKDAGRAIDVLVERGVNPGRVGLVGFSRGAQLGFIVGGAERR
                     FAAVVAIIGGHFDFRETGHVPAACPANYIGRISPRPLLMVNGNADPDYIRATAVEPLE
                     RLAREPKQMIWLETGHLMPQGEIRTTIARWLQQRLGR"
     gene            complement(12058..12435)
                     /locus_tag="VGA78_00730"
     CDS             complement(12058..12435)
                     /locus_tag="VGA78_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892408.1"
                     /translation="MGLVDPPYKRLDKKMRRGVRGHPIATIAFYGPTNELASKVVVSI
                     VPGPDQPATVLKRWFSEGPDIRYDEAIGAMILALLQERGARSVVMTRGVIGCPHEEGV
                     DYPLGEVCPRCPFWKDRDRWKEA"
BASE COUNT         2097 a         4211 c         4343 g         2165 t
ORIGIN      
        1 tcatgcgggg tctgcagaac ctggcggcca tcgccctgcc gaaatcgggc gtcccgctcg
       61 accaggtcat tgccgacctc gacctggtcg cgagcagact cgaagcggag taccccgact
      121 tcaacaccaa tctcaccgtc cggccggccg ggctgctcga cggccccgtg gcccgggtcg
      181 ggccggccct gtacgtcctg ctgggcgcgg tcgggttcct gctgctgctc gcctgcgcca
      241 acgtctcgaa cctgctgctg gcgcgatcgg tggcgcgggg tcgtgaggtg gccatacggg
      301 ccgccctcgg cgccgcgcgc gggcggatgc tccgccagtt cgtgaccgag aatctgtttc
      361 tcgccgcggc gggagccggc gtgggggtcg tgctggccat cgccctcaag ggcacggtgc
      421 tcgccctggc ccccgacggg cttccccgga tggacgacat cacgctggat tggcgggtct
      481 tcggaatcat cttcggcgtg atggtagtgg ttggcctcgg gttgggaggc gtttcggccg
      541 cccacctcac catcgccgac gggatggaag acctgcgcga tggggcccgg tccggtggcg
      601 gccccagggc gcgacggttt cgccaggccc tcactgccct cgaggtggcc ctctcggtga
      661 tgcttctcgt gggcgcggtc acgctgggac gaaccttcct caacctccgg cggatcgaac
      721 cgggattcga ccccgcctcg gtgctcaccg ctcgcgtggt gcagccgttc cggatgacga
      781 gcttcgaggg gttcgggcga atgattccgg tatgggcccg cttccagcgg agtctgatcg
      841 agcaggtgga gtccattccc ggcgtgcgcg ccgcggccgt cgcgagcacg ctgccgctca
      901 ccggagcctg ggaatccacc ggcttctcca tcgaagggaa gccggcgccg acgccgggaa
      961 atccctacac cgcctttttc gcaggcgtct cggaagggta cttcagcgcg ctgcgcgttc
     1021 cggtgatccg gggccggacc ttcagccgag cggaccctga cagtgtcccg gtggcggtca
     1081 tcagcgagac cctggcgcgc gcctactggc ccaacgagga tccactgggt cagcgcatcc
     1141 gggtcttcgg cgactttccg cttcagatcg tgggtgtggt gggcgacgta cggcaacggc
     1201 aactggggag cgagccggaa cgaatgctct acctgcctcc ctcggtgtac accggcccgt
     1261 cggtcacgtt ggtggtctcc accaccggtg cgccgctctc gatcgtgccg acggttcggg
     1321 agcggctccg ggccctcgac cggggcactc cgctcaccgc ggtcgcctcg atggaagaca
     1381 tcctggcgga atcgctcgcc cagcagcggt tcagcgccac gcttctcggc gtattctcca
     1441 ccgccgctct ggcgttggcc gtgctcgggc tctatagcgt gatcagcttc ggcgtggccc
     1501 gacgggcgag ggagttcgga gtgcggctgg ccctgggcgc gcatcccggg cgggtgcaac
     1561 ggatggtgct gcgcgagggc ttgacgctat cgctcgtggg ggtcggggcc ggcgtcgcgg
     1621 gtgccgccgc cctctcgcgc gtggtgtcgg ggctggtcta cggggccagc acgaccgatc
     1681 ccgctaccct cctcggggtc gcggctctgc tcacgacggt caccttgatc gccacgctgg
     1741 tccccgcccg ccgagccatg acggtggacc cggccgtagt gctccgggag gagtgaagac
     1801 agggtcaccc cgatcgttga acacagggta ggatcgcttc gccctcctgg tccgccagag
     1861 gcgccggcgg cgcgacagca tgcccttgcg cgtatcccac gcccaggacc cgaagccgct
     1921 ccagaatggt ttcgttctct acctcgtcag cgatcgtggc gatgcccatg attcgaccga
     1981 tctcgttcac ggtgctcacc agcgtgccgt acaccgggtc ctcgatcacg ccccggacgt
     2041 agtgcccggc gatctttacg aaatcgagcg acagcgcctt gaggtggacg aacgagggca
     2101 ggctgttgcc gaagccgtcc agcccgactc cgcagccggt cgcccggatc tcggaaatga
     2161 ggcggaccag ttgggaaaag ttccccagcg ccgccgcttc ggcgatctcg aaacacaggg
     2221 tctccggcgg aagccggtgc tgcaccaggt actcccgcac ctcggcgacc aggtccgcat
     2281 cgtccaggga ggacacgctg aggttgatcg agcagagggg tagctcgcac tgcgggtggt
     2341 cccgatgcca ttggcccagg agtgcgaccg tctggcgcac gacccaccgg tcgatcgccg
     2401 gcatgaggcg gtaacgctca gcgtgcagga ggaacgagtc ggggagctcc acgccaccat
     2461 gctcgtcccg caagcgcaac agaatctcac accggggacg tgcccggggc tccgccaacg
     2521 gtacgatcgc ttgggcgtac agctgaaagc tgccctcgtc caccgcccgg gtcaggtggg
     2581 tgacatgtcg gagctccacc tgctgccgga ccccaggggc cgccttgatc ggcgcgagct
     2641 cgacccggtt gcctcctgcg ttcttggcgg cataacaggc ctgatcggcg gcccgcagga
     2701 cgtcagccgt tcgtccgctc gcggcggtga tcgggatgac gccgatgctg acgccgagcg
     2761 agaagctgct ctccccccag acgaactgga ggtcctggat cgcccgctgg aggttcccgg
     2821 cgatttcttc cgccttggac aacgagcagt gctccaggag aatgccgaat tcatcgccgc
     2881 cgaggcgccc ggcggtgtcg cggctgcgca aacgggcacc caggagacgc ccgatcgtcc
     2941 ggaggaggtc atccccggcc tcgtgaccgc aggtatcgtt gaccagcttg aagcggtcca
     3001 ggtcgaggta acacagcgcg tgctcggccg caccggccgc gacattggcc agaacccgcg
     3061 ccaggcgccg ctcgaactcc ttccggctca ccaggcccgt gagggcatcg tgggtcgcct
     3121 cgtgggagag ctcgcgggcc gcacgccgtc tctcggtcac gtcgtgaaag accagcacca
     3181 caccgatggt ggccccgttg cggtcgcgga gcggggcggc cgagtccccg atcgccacct
     3241 cggtcccatc gcggcgcagc agcagcacgc cgttgggcag gtccaccgcg cgcccttcct
     3301 ggagacagcg ggccgggatg ctctcgatgg gttgccgcgt ggagtcggag atgagcgtga
     3361 ggacggtggc caggggctgc cccaaggcct cggccatgcg ccagccggtg agccgctcag
     3421 ccgtggggtt caaataggtg atcgtgctgg ccaggtcggt cgtgatgacc gcatcggcga
     3481 tcgatgccag agtgacggag gcctgctctt tctcccggaa gagggtctcc tgagcccgac
     3541 gccacttggt gaggtcgcga atggctacca gaacgggcgc gtcggtgccg ggaccaagcg
     3601 ggcttcggtt gaactctacc gggaactcgc tgccgtcccg tcgccgagcg aagaggctga
     3661 ccggcccacc ctgcggcgga atctcaggcg ggccgccgcc gctcaaatcc agcaactctg
     3721 acacctgctg gaagcgaggg gggatgagcc gattcagagg ctggcccagg agctccgctt
     3781 cggtccagcc aaacaatcct tcggcctgtc gattcagcgc gactacgctt cctagcgggt
     3841 caacgacaac aacggcgtcg gggacggcgt cgagcagctc ccggaatccc tccagctgca
     3901 cgggatgcgt ggtcatggcg gcagctccag tcgcgggtca gtgtgacatg ttacgttcct
     3961 gagggtgctg ctacggaagg ggcgtcgaag ccgtgcctgc cggacgcggc cccgacatgt
     4021 ccgtcacgcc gacccgccgt cggcctccgt ctggtagctg ctgtggtcat ggtcatggga
     4081 gctgctgagg ccacatcatc actgaaaacg agggctcggc gcgggcacgt cgaatgggat
     4141 ttcgcggctg cagcgacacg gcggataggc accctccgga tccgttcgcg gtggtcaacc
     4201 gtcagggtca acgctatctc aacccctgta tagaaaatgg gcagaactga gcctggcgca
     4261 agctgtcaag cttgataggg tacttacttt ttgttagctt gccgcgcccc gcctaaccgc
     4321 ggggtccgca aagcagccga ctgggtgggc tcgtgggcct tcgaggacac ccagttcaaa
     4381 acgatcgaag ggcgtgaagc aaagcttcct tggcgcgcgc gtaaccggtg ggggcttggc
     4441 ttgcgcgggg acccgccacg ttgagccgga ctgtgtcccg ggtccgcagg agttccttca
     4501 gccatgcccg gatcgccgag ccggccgcga acgagtccag cgtcatcagg tcaagatcga
     4561 gaacggggcg gtggagtcta taagctgcgt cgagagtctc gagggtcccc ccactggcgt
     4621 tccccattcg cagaaccaga gttgcatcag tgtcctgaac gttccgacgg gtccggacac
     4681 catagtcctg ggaatctgtt tctcgcagcg agccataccg agcaggaacc tgcccgtctt
     4741 cggccctgcg gccgagcgga atccagccgc cggtcgggag tgcaagctcg atggctgcat
     4801 cgagggccgc gcgatcgacg ccggtttggc ccccggtcca gatttccagc tgttgaccag
     4861 ctggcgcggg agcgtttcga tgcaagagcc cgcctctggt ggctgtctca ctcgcgctgg
     4921 tcgcgagtgc ccagcgcctg ccgatctcgg ccctgtgcca ggagtcgctc ggcaaagtca
     4981 agccgttctt gaagctctgc gagctgggct gactgatcgg ccaacgtggt ctgggcgtcc
     5041 tccagtgcgc cggcctgctg ctccaattgc tgcttcatgc cggcgggctc cctgccgcca
     5101 cggccctgcc gcaggcgctg cgcccatacc ccgaacccca gcgccagggc tgcgtgaccc
     5161 gcggcatgcc acggctcggc tgatccaacc gcgaaaccca gtgcaacgaa attgatgacg
     5221 ctgagcccga cgacgatcgg ggaccagaac gcagacttga aggtcatgtc gatatcctga
     5281 tgaggcgccc acggagtgtt ggttaggcgt caggccttga tgcgacgcca agtgccgtcc
     5341 tgatctgatt gaggtgatgg gcgttgtgcg aagcgacttt atcgagctcg tctttcaacg
     5401 tccgcacgcc ggtcgtgctg tgcacgaact caaggtgtcc attgttctcg tagtgcaaac
     5461 ccgcaaagta gatgatcgcg cttctgaccg actcgtagac ccgacgcgag agctcgagag
     5521 ggacgtgagc gtagtccagt cctctggccc aggcatcctg atcgtatacc caaagcacct
     5581 ggcggggctc gctgagaact cgtcggatgc gatcgttaaa tacggtctcg ctgtccgcga
     5641 ggtggtgcag gatgaacctg atggcccact tgcccggcgc gtaggtccgg gcaaggtcct
     5701 tttcgccgag ggtgaagtat tgcagcgttt cgtcgcgggt ggcttcgaga tcctggatca
     5761 gttgcacgag accactcctg gcaatgtcat gtcccgcaac acggcctgtc aggtcgggac
     5821 tcacccatgg gtccttcacc ggaagttcga caccagcatc aggtcattgg tggaggcatc
     5881 cagccgggga aagagaatcg tgcggccatc tgaagagacc gtgagcggga ggtccaccga
     5941 accgagattg cgagccactg tggtgacctt gcgcgtcgcg aagtcgaagt accgaagccg
     6001 ggtctcgcca gtcggctggt cgacatagtg ggtgccgacc tgacccgaag gctggtcgat
     6061 atagtaaatg cctcccgtga gcaccgcgaa gttggccagc aggattcctt ccagcagttt
     6121 caccggagca ccgccggagc gtggcaaacg ccacagcggg ctcggtttgt cgatggcctc
     6181 gacgtaatag atggactcgc catcgggcga ctcctgcggc gcgtagccgg cgcctgtcgc
     6241 cacctgcacc gcacttccgc cggacgccgg gactttccag accgactgat gttgctctcc
     6301 agttctggcc gagttgaagt acacccattt tccgtcccgg gagaatctcg gcttggcatc
     6361 gtgcgccggg tgagaggtga gattgcgagg cttgccaccg gcggcgggca ccaggtacac
     6421 ctcccactgc ccgtcgacat tggagtggaa cacgatctgt tggccatcgg gagaccagtg
     6481 ggggtagccc gccgcgactg cacccatgga ggtgagctgg accgcattcg cgccgtcagg
     6541 atcagtcagc cagatctccc agttccccga gcggtcggag gtgaaggcga cgcgacggcc
     6601 gtcgggagag aactgtggca tatcctcgag tctggtggac gaaatagcga cgactggtgg
     6661 tgtggaagcc gtcgcgccgg gagccgccgt ttccacccgc cagatattgc catccaggaa
     6721 actgcgaata tagaccagac gaagtgggcg cccgggttgc gggcgcgaaa ccgccggcat
     6781 cagaccatag tctcccacga acggcagccg cgccggggcg ttctccccgg agaccgagag
     6841 tctccagaga ctgctcttgg cggaaaagag aatctcctta ctgtcgggca tccaggcagg
     6901 gtgttccgca ttcagcgcgg ccagggttag tcgctccggc tcgccggcgg cggtcacccc
     6961 tggtcccagc ggaagccggt agagctcacc gacgaacaga cccgccattc ggcgaaacac
     7021 gagccacctg ccatcagggg agacggcggg gtggctatcg cctccggccg gcggctgggg
     7081 atgggtcaat tgccttctct ctgccgactc gagcgagaac gcgaacaggg cattggggtg
     7141 accttcaccc ggagaatccg tcactaccag gcaggtccca tctggacacc aggcaaggta
     7201 cggaggggtg atgtcgaggc taccgaggag acgcacctcg gccagcttgc gctccggccc
     7261 acccagcggc gcgatcaatc gcaattcgct ccggttgggt tccgattgac tccgcaagaa
     7321 ggcgatccaa cggccgtcgg gcgaccagac cgggttgaag tcgttgccag cgtcactcgt
     7381 caggtggagg ggctgggccg agccgatttg ctgcacgtag atgtcggggt tgtcctgcct
     7441 cggtccgttc caggtgaacg ccacgtgctc cccgtccggg gagaaagacg gatagcgttg
     7501 cacgccgggt agcgtggtga gcggcacggc ctggagcggc tccgcgctcc tcggcgtggc
     7561 ccagtcacgc caggcaaaga ttcccccgac cagtccgaga gcgagcacca gggccccgac
     7621 caaccggcgg cgcagtcgca cctgctggac ccgcctcccc gatttcgatt cctcctggac
     7681 gtcctccagc gccaccttca gatccgccat cgtctgatgg cgccgggccg gatccttccg
     7741 caggcagcgc agaatgacct tggaaagctc ggggtgaatc gaggctggca gcggccgggg
     7801 ttcctgagcg aggatcgcgg ccacggtctc catcgcggag gcgccctgaa acgccgcctg
     7861 cccggtcacc atctcgtaga gcatggcgcc gaatgagaag atgtcgctcc gggcgtcaac
     7921 gtcccgcgcg gccgcctgct ccggcgacag gtactgggtg gtgcccagca ccatccccgg
     7981 ttcggtatgg agggcgaccg atggggccag ggtgctcgcg tctcccccgt gaggagcgag
     8041 ggtctccgtc agcttggcga gcccgaagtc aaggactttc acatacccat cgcggcggag
     8101 catgatgttc tccggcttga tgtcgcgatg cacaatcccg gcctcgtggg ccgcggccaa
     8161 ggccgacgcc acttgcgtgg ccacgctcag cgcttggctg aacgtcaggc tgcccgtccg
     8221 gtgcagcgcc gcgcgtaggc tctcaccgtc aatgaactcg gtgacgataa agtgatggcc
     8281 gtcttcttcg ccgacttcat gaatggtgag gatattgggg tgattgaggg cggacgccgc
     8341 cctggcttcc tgcttgaatc gtcgcaggcg gtcttcatcc tgcgtgtgtt cgggcggcag
     8401 gagcttcagc gccacgcggc ggccaaggcg gacatcttcc gccaggtaca ccacgcccat
     8461 gccgccggca cccagctcct gaatgatccg gtaatgcgag agaacccggt cgatcattga
     8521 tcgtccgatg cgagaactcg tgcgactctg ctgcgaaccc caaatgaaac gcgaacgggt
     8581 gacgctggca aactcggagg cacaatcgag cgaggtccag gctttgactc cacggagtcc
     8641 ttgtcggtcc gcgtagacgg ccacaattgg cccgtcctcg tcaggtggaa ctgcgggtga
     8701 aggcccatcg gcgggtccaa cgggggagta gcaagggccc ttcccgcatt tccccgccat
     8761 tccggtaact ttcaagtcca tggattcagc cccgccggga ctccggcccg cgcagtcgcc
     8821 cccctcgccc cccggccggt gctgatgcgg acgcgtatct cgtgagcaat ctgggtgatc
     8881 aggtgcaggc ggcgctgggc gacgccttcc gggtccaggc ggaactgccg gccggcggga
     8941 tgagccgcgt ttttctggcg gtcgagtcat ccctcaaccg ccgggtcgtc gtcaaggtgc
     9001 ttccgcctga gctcaccagc gacgtgagcg cggcccggtt ccggcgggag gccgagctcc
     9061 tggcccagct ccagcacccg cacatccttc ccatcatcag cagcggatcc cgcggcggcc
     9121 tcctctacta catcatgccc tacgtgcagg gcgagtcggt ccggcaccgc ctcgagcggg
     9181 agggcatgtt cccggtggaa gacgcaatcc gggtcgtgac cgaggtggtg gacgcgctga
     9241 gctacgccca cgctgctgga gtactgcatc gcgatatcaa gcccgagaac attctgttgg
     9301 aaggacgtca cgctgtgctc gccgacttcg gggtcgcgcg ggcgctccag caatcccaga
     9361 ccggcggccg cctgaccgcg accggcatgt cggtcggcac tccagggtac atgtcgcccg
     9421 agcaggtgtc cggtgattcg gtggacgcgc gggccgactt gtatgctctg gccgtggtcg
     9481 gctatgagat gcttactggg aaaccaccct tcagtggccc caccgcccag gcggtgctcg
     9541 ccgcccatct cacgacaccc ccgcttccgg tcgaggaact gcgtcccgag gttccgctcc
     9601 acgtgagccg ggccatcgcg cgggccctct ccaagcggcc ggaggaccgg ttcgaaagcg
     9661 cggggacgtt ccgagacgca ctggagggtc gggagatcgc gccggcgacc gcgccggcct
     9721 tgcccttgcc gggacggtgg ctccgtcgaa ggactctcgg catactgctg gcggtgagcg
     9781 tggccctggc ggtggtcgcc gtcctatggc gccgcgggac aggaatcgat cccggccttc
     9841 tgggaatcat ccgcgcgacg gccgactcag ggtgggtcga tgagatcgcg cggctgctgg
     9901 acagcggggg cgtggcaccc gaccacccgg tcttgcgaga gaccctggca cggttcaccg
     9961 ggcgcctggc ggttgaagtc gaaccgcggt cggccctggt ggaaatcgtc cgagtcgagc
    10021 cgatccagag cttcagcggc cgcggattcc gaccggtcgg cgccacgcag agggtggcgg
    10081 tccttgccgg tgaatacctg ctccgcggca gcgcgccggg tttccaggag cgcatgaccc
    10141 tggtgcaggt ggccgcagac agcagcgccg aggtagccct caggctcctg ccctccgaca
    10201 gtgccctcgg gccccgggtt caggtgcccg ccggcagcag tccggttgga ggggaggtgg
    10261 gcccccttct gatcagccgg ttcgaggtga ccaacgagga gtacctcggg ttcgtcagcg
    10321 ccggtggtta ccgggatcgg tccctctggc ccgaccgcat gtggttcggc gaccaggggc
    10381 aaccatggga ccaggctgtc acccgcttcg tcgaccgaac cggtctgccg ggccccagga
    10441 cgtgggagag cggccggtat ccggtggcga aggcgaccca tccggtcgcc gggatcacct
    10501 ggtacgaggc cgctgcgtac gccaagtggg tcggtggcca actcccgacg gcggcagcat
    10561 ggtggcgcgc ttcgctgggc gccgtggtcc gtccgtatcc gtgggggacc tcggggacgg
    10621 cggtccacct tcgcgcgaac ctcgaggggg tcgaaaccgc caccgtcggc tcctaccccc
    10681 tcagcgtgag tccattcggt gcgatggaca tggccggcaa cgtccgggaa tggctggccg
    10741 attcagcggg cgcaacccac cggttcactg ccggcggatc gtggcaggag ccggtctata
    10801 ctgccgggct cgagtgggtc gagcgcttcc cgccgggcta cacgagcacg gcgctcggat
    10861 tcagagtcat gtggagggag gccgaaccgt gagacgctct acccgtggga ttcttcggct
    10921 ggtcaccatc gcggtggtgg ggttggcccc tatcctgggc gcgcaggtgc gacccgaagg
    10981 tgacgagtgg ctcaaacagc ccgtggatga ccggaccttc gccacattcc tgactttctt
    11041 cgactacgat gcgaagcggc cgctcgatat ccgggtcgcc aaggtcgagg acagcgaggg
    11101 catccggagc gagctgctct cctacgagag cgcggcgggc atcagggtga ccgctcggct
    11161 ctaccacgct ccgggtgcag taccgggcgg ccccggcctc gtgttcctgc acggtgggac
    11221 cggtgtgggg aaggatagcc cgggactccg ccagctgtgc gaccaccttg ccagggccgg
    11281 attcaccgtg ctcgccatcg acctccagta ctttggcgag cgcgctaccg agctgctgcg
    11341 ggaattcacc gaggaggaga aacaccagaa gctgtacaat cagccgggca cctatctggc
    11401 ctgggtgacc cagacggtga aagacgcagg tcgcgcgatc gacgtgctgg tggagcgcgg
    11461 agtcaacccg ggccgggtgg ggctggtcgg cttcagccgg ggtgcccagc tcgggttcat
    11521 tgtcggcggc gcggagcgac ggtttgcggc ggtcgtggcg atcatcggcg gacatttcga
    11581 tttcagggag accggccatg tcccggccgc ctgcccggcg aactacatcg ggcggatcag
    11641 tccgcggcct ctgctgatgg tgaacgggaa cgccgatccg gactacatcc gcgccaccgc
    11701 agtggagcca ctcgagcgat tggctcggga acccaagcag atgatctggc tcgagaccgg
    11761 acatctgatg ccgcagggcg agatccgaac caccatcgcc cggtggctcc agcagcgact
    11821 gggccggtga cgctggcctg ctccttccat cgttcaacgt tcacgccgat cgcgaggagc
    11881 cacagcacca gcgacagttc gccgggggcg gcgagggcca ggttgaaggg ggacacggag
    11941 ttcgcgagcg gcggccccac aagcgtgcgg taatccaaac ccgccagacc agggcggggg
    12001 aattgaaaga gactgctgac agcctgaaga gcgatcgcca cgaggctgaa gaacggatca
    12061 cgcttccttc cagcggtccc gatccttcca gaaggggcat cggggacata cctcgccgag
    12121 cggatagtcg accccctcct catgggggca cccgatgacg ccgcgggtca tcacgaccga
    12181 tcgagcgccc cgttcctgga gcagagccag gatcatcgct ccgatcgctt cgtcgtagcg
    12241 gatgtccgga ccctcgctga accaacgctt caggaccgtg gccggctgat cgggccctgg
    12301 gacgatactg acaaccacct tcgaggccag ttcgttggtt gggccgtaaa acgcgatcgt
    12361 cgcgatcgga tggccgcgaa cgccgcggcg catcttcttg tcgagtcgct tgtagggtgg
    12421 atctaccagt cccatacatc ctgctccaat cggacccaca gagacgtgcg cccaacggat
    12481 cggtactcag cggcaggcgc cgcatgggta cgagcggccg cgccatcctc caaccaacat
    12541 tggagcgcgg ccgcaacttg tcaaagggac tcccgggcgc ctgtccgatg caatacccgg
    12601 gttaggcacc agggagtgca ccggtgcccg ggtgcaaggc ccttagcgcc ctacgtgagc
    12661 gcgcacccag tgcaggccgg tcatggcttc gaggtaccgg gctaactggc gcgggtcggc
    12721 gggcgggccc cttgagaacc cgacccggct tggccccggt cagcgatccg tcccggagca
    12781 ccaactgccc gttgaccagt atgtgaacca tcccga
//
LOCUS       DASWKS010000020         3891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1857359, whole genome shotgun sequence.
ACCESSION   DASWKS010000020 DASWKS010000000
VERSION     DASWKS010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3891
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857359"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1096
                     /gene="argF"
                     /locus_tag="VGA78_00735"
     CDS             176..1096
                     /gene="argF"
                     /locus_tag="VGA78_00735"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX9892409.1"
                     /translation="MSKRDFLAIPDLSRDEVHRLMALALDMKAGRYRDRPLAGKTLGM
                     VFAKSSTRTRVSFEVGTFQLGGHALFLSSRDIQLGRGEPIRDTARVLSRYVDGIMIRT
                     FDHADVEELARFATVPVINGLTDRLHPCQVLADLLTVKESLGGWEGLTVAWIGDGNNM
                     ANSWINAAGLLGFELRLACPAGYQPDPAILQRNQGKAKIEVVREPARAAEGAQVLTTD
                     VWASMGQEEEAEARRQAFAGYVVDQSLMARAADQAIFLHCLPAHRGEEVSEAVLEGPQ
                     SRVWDEAENRLHIQKALLAALMGDDAVRLQ"
     gene            1093..2199
                     /gene="gcvT"
                     /locus_tag="VGA78_00740"
     CDS             1093..2199
                     /gene="gcvT"
                     /locus_tag="VGA78_00740"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017950434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEX9892410.1"
                     /translation="MTEALKHTPIHAAHVALGAKMVPFAGYEMPVQYPGGIMAEHQAV
                     RTDVGIFDVSHMGEFEVTGPDRNAFVNRVTCNDVSVIKTGQVQYSAILSDEGTFVDDC
                     TIYRFDDKIMLVVNASNRQAAWDHIVEQKKGANVRLRDISDDIGLLAVQGPRAEALLQ
                     PLAGLDLQAIGYYHHASGSIGEVGCFISRTGYTGEDGFELYCRGRDTALLWEAVTRAG
                     ARPIGLGARDSLRLEVGYALYGNDIDDTITPLEAGLGWIVKLDKGAPFTGLEALKTQK
                     LRGVTRKLVGFQLTERGIPRHGYPVWLDGKQVDIVRSGGQSPTLGEAIGTTYLPPASA
                     KTGTRFQVDCRGQRVAAVVVKKPFYTGGSARKDG"
     gene            2311..2793
                     /locus_tag="VGA78_00745"
     CDS             2311..2793
                     /locus_tag="VGA78_00745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MogA/MoaB family molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="HEX9892411.1"
                     /translation="MRTAILTISDAGHRGERADKSGDAIAAWAAARGDAVATRDLVPD
                     EAPEIVRKLVIWADSGTVDLILTTGGTGLTPRDVTPEATRAALEREAPGIAEALRVTV
                     YPRFPRAALSRGVAGVRGRTLIINLPGSPGGVKDGLEVMEQWIDHAVDLVRGERTSHE
                     "
     gene            2833..>3891
                     /locus_tag="VGA78_00750"
     CDS             2833..>3891
                     /locus_tag="VGA78_00750"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9892412.1"
                     /translation="MTDQIILTMDDLETAVPLNAALEADGLTTAMVSAMDDPRAALRR
                     ARPELLILTGGAHEQPSQQLIALARDQEIFTLALLEPTEQQRSERVARLGVSETMKKP
                     VRPDEVVLTARRLLERHRLQRHTGIFGQSSAVHEVLVKIEQMAPVSSTVLIQGESGTG
                     KELVAKAIHDLSPRRGQPFITVNCAALPETLLESELFGHEKGSFTGAAERRLGRFELA
                     DTGTIFLDEIGEMNPATQVKLLRVLENRTFFRVGGVSPIKVDVRVIAATNRTLKDQVA
                     LGEFREDLYYRLNVLNIYLPPLRERREDIPLLVRKFIREFTTQHDRKFPGLSAEALQR
                     LVSAPWPGNVRQLRNLIES"
BASE COUNT          647 a         1338 c         1311 g          595 t
ORIGIN      
        1 gtatcccgaa tcccctgaac ggctccggtt cgacaccgtg gtttccggcc gggccctgcg
       61 cgcgacgctt tcggacgtcg cctattaccg cagcttcacg ccgtaggtct gtcgccgggt
      121 tgccgccccc ccggtgatgg actatgatcc gcccccagcc tggcctcgga actccatgag
      181 caaacgcgac ttcctcgcca ttcccgatct ctcgcgggac gaagtccacc ggctcatggc
      241 cctggcgctc gacatgaaag cgggccgcta ccgcgatcgc ccgctggcgg gcaagaccct
      301 cggcatggtg ttcgccaaaa gctccacccg tacccgggtc tctttcgagg tggggacctt
      361 tcagctgggc ggtcacgcgc tgttcctctc gtcccgcgat atccagctgg gtcggggcga
      421 accgatccgg gacacggccc gggtgctgtc gcgctacgtc gacggcatca tgatccgcac
      481 cttcgaccac gccgacgtgg aagagctggc ccgcttcgcc acggtcccgg tgatcaacgg
      541 tctcaccgat cggctgcatc cctgccaggt cctggccgat ctgctcacgg tgaaggagag
      601 cctgggaggc tgggaaggcc tgaccgtggc gtggatcggg gacggcaaca acatggccaa
      661 cagctggatc aacgccgccg gcctgctcgg cttcgagctg cgcctggcct gcccggccgg
      721 ttaccagccc gatcccgcca tcctgcaacg caaccagggc aaggcgaaga tcgaggtggt
      781 gcgcgagccg gctcgagcgg ccgagggcgc ccaggtgctc accaccgacg tgtgggcctc
      841 gatggggcag gaggaagaag ccgaggcccg gcgccaggcc ttcgccggtt acgtggtgga
      901 ccagtcgctc atggcccgcg ccgcagacca ggccatcttt ctccattgtc ttccggccca
      961 ccggggggaa gaagtgagcg aggccgtgct cgaggggccc caatcgcggg tgtgggacga
     1021 agccgagaac cggctgcaca ttcaaaaggc attgctcgcc gctctcatgg gcgacgatgc
     1081 cgtgagactc caatgacgga agccctgaag cacaccccga tccatgccgc ccacgtcgcc
     1141 ctgggcgcca agatggtgcc gttcgcggga tacgaaatgc cggtgcagta tcccggcggc
     1201 atcatggccg agcatcaggc ggtgcggacc gatgtgggga tcttcgacgt ctcccacatg
     1261 ggcgagttcg aggtgaccgg cccggaccgc aatgccttcg tcaaccgggt cacctgcaac
     1321 gacgtcagcg tgatcaagac cggccaggtg caatactccg ccatcctctc ggacgaaggc
     1381 accttcgtcg acgactgcac catctatcgc ttcgacgaca agatcatgct ggtggtgaac
     1441 gcgtccaacc ggcaggccgc ctgggaccac atcgtggagc agaagaaggg cgccaacgtg
     1501 cggctgcgcg acatctcgga cgacatcggc ctgctggcgg tgcagggccc ccgggccgag
     1561 gcgctgctcc agccgctcgc cggcctcgat cttcaggcca tcggctacta ccatcacgcc
     1621 agcgggtcga tcggcgaggt cggctgcttc atctcgcgca ccggctacac cggggaagat
     1681 ggcttcgagc tctactgccg cgggcgcgac accgccctgc tgtgggaagc cgtcacccgg
     1741 gccggggccc ggcccatcgg cctgggggcg cgcgactcgc tccggctcga ggtcggctac
     1801 gccctgtacg gcaacgacat cgacgacacc atcacgccgc tcgaggccgg tctgggctgg
     1861 attgtgaagc tcgacaaggg cgcccccttc accggcctgg aagcgctcaa gacccagaag
     1921 ctccggggcg tcactcgcaa gctggtggga ttccagctga ccgagcgcgg cattccccgg
     1981 catggatacc cggtctggct ggacggaaaa caggtcgaca tcgtgcggag cggcggccag
     2041 agccccacgt taggcgaggc catcggaacc acctacctgc cgcccgcatc ggccaagacc
     2101 ggaacccggt tccaggtcga ctgccggggg cagcgggtgg ccgcggtggt ggtgaagaag
     2161 ccgttctata ccgggggaag cgcgaggaag gacggttagg gcggataggg cggttaggcg
     2221 gttaggcggt tagggcggtt atgaacttca cctttccggc cttaaccgcc ctgaccgcct
     2281 taaccgcctt aaccgcctta accgcctaat atgcgcactg ccatcctcac catcagcgac
     2341 gccggccacc gcggtgagcg ggcggataag agcggcgacg ccatcgcggc ctgggccgcc
     2401 gcgcgcggtg acgcggtggc gacccgggac ctggtgccgg acgaagcgcc ggagatcgtg
     2461 cggaagctgg tgatctgggc cgattcgggg acggtggacc tgatcctcac caccggcggc
     2521 accggcctca ccccccggga cgtgactccg gaagcgaccc gggcggccct cgagcgggag
     2581 gcgcccggca tcgccgaggc gttgcgcgtg acggtctacc cccggttccc ccgggccgcc
     2641 ctctcccgcg gcgtcgccgg cgtgcggggc cgcaccctca tcatcaatct ccccggcagt
     2701 cccggcgggg tgaaggacgg actcgaggtg atggagcagt ggatcgacca cgcggtggat
     2761 ctggttcgcg gcgagaggac cagtcatgag tgaccagtcg gtcggtcggt cagtcggtct
     2821 gtcggtccgc ccatgaccga tcagatcatc ctcaccatgg acgatctcga gactgcggtg
     2881 ccgctcaacg ccgcgctcga agccgacggg ctcaccaccg cgatggtctc ggccatggac
     2941 gatccccgcg ccgcgctgcg ccgggcccgg cccgagctgc tgatcctcac cggcggtgcg
     3001 cacgagcaac ccagccagca actcatcgcc ctggcccgcg accaggagat cttcacgctg
     3061 gctctgctgg agcccaccga gcagcagcgc agcgagcggg tcgctcggct gggcgtcagc
     3121 gagaccatga agaagccggt ccggccggac gaggtggtgc tcaccgcccg ccggctgctg
     3181 gagcgacacc ggctgcagcg ccacaccggg atcttcgggc agagctccgc ggtgcacgag
     3241 gtgctggtca agatcgagca gatggcgccg gtctcgagca cggtcctgat ccagggcgag
     3301 tccggcaccg gcaaggagct ggtggccaag gcgatccacg atctctcgcc ccggcggggg
     3361 cagccgttca tcacggtgaa ttgcgcggcg ctgcccgaga ccctgctcga gtcggaactg
     3421 ttcgggcacg agaaggggtc cttcaccggc gccgcggagc ggcggctggg acgattcgag
     3481 ctggccgaca ccggcaccat cttcctcgac gagatcgggg agatgaatcc ggccacccag
     3541 gtgaagctgc tccgggtgct ggagaaccgc accttcttcc gggtgggcgg ggtctcgccc
     3601 atcaaggtgg atgtgcgggt catcgccgcc accaaccgca ccctgaagga ccaggtggcg
     3661 ctgggcgagt tccgcgagga tctttactac cggctgaatg tcctcaacat ctatctcccg
     3721 ccgctccggg agcggcggga agacattccg ctgctggtgc ggaaattcat ccgtgagttc
     3781 accacccagc acgaccggaa gttccccggc ctgagcgccg aggccctgca gcggctggtg
     3841 tcggcgccct ggcccggcaa cgtacgccag cttcgcaatc tgatcgaatc g
//
LOCUS       DASWKS010000021        13819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2967036, whole genome shotgun sequence.
ACCESSION   DASWKS010000021 DASWKS010000000
VERSION     DASWKS010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13819
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2967036"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..162)
                     /locus_tag="VGA78_00755"
     CDS             complement(<1..162)
                     /locus_tag="VGA78_00755"
                     /inference="COORDINATES: protein motif:HMM:NF014494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HEX9892413.1"
                     /translation="MLAVTGASGAPYAVRLLEQLAQQALPVWLIVSTHGWRLLEQECG
                     ITGPDQLRAA"
     gene            complement(326..1237)
                     /locus_tag="VGA78_00760"
     CDS             complement(326..1237)
                     /locus_tag="VGA78_00760"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HEX9892414.1"
                     /translation="MSRETQVLPAEGQVLRGESLLVRYANFVKLPHTLFALPFAFLGV
                     LAASRRTPVSGRTVLLVAVAFTAARWVAMGFNRIADRALDAANPRTRGRELPQGKLSL
                     AQAWMSVVLAAVVFLFSAWQLSPLCFALSPAALAWVMAYSLSKRFTWWPHLWLGLSLS
                     IAPVGGWLAVTGGWSDPWWLLLAITVAVMTWVAGFDIFYALPDEEFDRGAGLGSAVVR
                     LGRARSIRLAKSLHAITIPALMLFGWGAGFGAWYYAGIGVATVILVYEHRLVRPGDLS
                     RLDAAFFNLNAVMSVTVFGFALIDVLL"
     gene            complement(1234..1983)
                     /gene="ubiE"
                     /locus_tag="VGA78_00765"
     CDS             complement(1234..1983)
                     /gene="ubiE"
                     /locus_tag="VGA78_00765"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: protein motif:HMM:NF001244.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEX9892415.1"
                     /translation="MLATDRGLRGDVGKGERVEGSGKRTYVRDVFTAIAPRYDFLNHL
                     LSLNIDRLWRRAAVRQLGWERAPGGRYLDVCAGTMDLAATLARRSGFTGQVVAADFVQ
                     PMLALGKRKAPRTIPVTADALELPFTAGRFEGAMVGFGVRNLADLDAGLREMARVLKR
                     DARLVILEFTTPPRQPLRALYSFYFRLVLPLIGRLVSKHTTAYTYLPESVMAFPEPVA
                     LAERIRQAGFTEVHFRRLTGGICACHVGRKP"
     gene            2037..2642
                     /locus_tag="VGA78_00770"
     CDS             2037..2642
                     /locus_tag="VGA78_00770"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9892416.1"
                     /translation="MAEPRAPLNSASDQDVVARARDGEEAAHRELVRRYERPVFSLIY
                     RMVRDREIAEDLSQETFIKVLNAIASYRPEFKFSSWVFKIANNTAIDHLRRKELDTLS
                     LEGSPHAATPEAIEATALQLGTERSSPLDHVAARELGGEIEAAINRLRPEYRSCILLR
                     HVEGRAYEEIAEILGLPLGTVKTYIHRARNELRVMLAHLRE"
     gene            2678..3259
                     /locus_tag="VGA78_00775"
     CDS             2678..3259
                     /locus_tag="VGA78_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892417.1"
                     /translation="MTTTPHLTPDDLDALLVGSMSASVRTHLGECALCRSLATTDRAV
                     ITVLERLPRFSPSPGFSDRVMARVSVAKASSRSILGLRVRVPTGRRAWLAAAVGVLLL
                     AGLTTSVVWSLGNRDVLAGWGQQTLSLLDGWLWLGVQTLAANLTEQPWYQPVRSALGT
                     PARLAVAGVAIVVTWSAGMLALKRLVALPSRTA"
     gene            3531..4520
                     /locus_tag="VGA78_00780"
     CDS             3531..4520
                     /locus_tag="VGA78_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEX9892418.1"
                     /translation="MERSLRQLLERRGPIQLTVPEGRAWMGDFGLGTGDTLRGHLLVL
                     RGTAQIFGRLEGNVVALDGDIVVHRGGSVTGDALAISGKVRDADRAIEGEVRALSQVA
                     TPPPRVGPLSALRRGAGLAGVFLILSLIGFGLVTFARPSLETVSDTVRHSLGRAFLVG
                     LLAQVLVIPTFGMLVVGLALTVVGVLLIPFAVATYLLLVLAALVLGVIAMAHATGETY
                     TRRRMALGVVVSPNSYRYVRLGLLALLALWVVWVVFGWVPMAGSLVFGGAALVTWLMT
                     TVGFGASLLSRAGVRPDFAGRIIPSEALTDEYLWATPQLGVPAVKRPTTPKGP"
     gene            4652..5428
                     /locus_tag="VGA78_00785"
     CDS             4652..5428
                     /locus_tag="VGA78_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892419.1"
                     /translation="MREYEAARPVRGERQMTVNLDFAAGGLRLMPGPAGTLYRLEARY
                     DTERFAPVSVYDSRRGRLTLGLRSTGAFGIRVTSRRHLDQQATVWLSPEVELGLEVTL
                     GAAESRIDLGGLRLRDLVLRAGGSRTRLVFSRPGVGVCREAVLEAGAGELVVDRFANA
                     GCRRLRLNGGVGVVSLDLGGALTGELTAELGMTMGELTLRLPHGAGVRLTLDRFLASF
                     QPAGFTRQGEQFVTPDYESAVRRIDLRVSTAVGAVKVEWY"
     gene            complement(5444..5926)
                     /locus_tag="VGA78_00790"
     CDS             complement(5444..5926)
                     /locus_tag="VGA78_00790"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9892420.1"
                     /translation="MGTRAETLAARIEQGAAALAAFAETLSESEWATELPRDGRTVGV
                     LVHHVASVYPIEIELAQVLRSGQPIKGVTWSVVADMNAKHAHDHNRVSQREAVELLLR
                     NSRTAAQAVRQFTDEELDRAAPVSLNGDAPLTTQFFIEDHALRHSFHHLARIRAALGK
                     "
     gene            complement(5973..7073)
                     /locus_tag="VGA78_00795"
     CDS             complement(5973..7073)
                     /locus_tag="VGA78_00795"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEX9892421.1"
                     /translation="MTLDARVAAALARIHNPRLDNDLLSAGMIRDLAVTPEGRVSFTF
                     LLAREDPATLVREARKALQAIDGVSEVKINVMDPAGPSKVTHGPPGAPQSVGAVPAPS
                     PQEMPNLGRVIAVSSGKGGVGKSTVAVNLAVALAQRGLRLGIMDADIYGPNVPRMFGL
                     FERPPVIKGRIQPLEAFGVRLISLGLIVDRDAPAIWRGPIIMKVIQQFLRDVEWGQLD
                     YLIVDMPPGTGDAQLSLVQSTPVSGAVIVTTPQEMAVGDALRGAKMFERVNVPVLGIV
                     ENMSGFTDPATGQRWEFFGSGGGQRLADELGVPLLGRVPLQPDLAALADRGQPVLTAA
                     PDSPAAQALLRIAGEVVNQVSAKGLVLPVLNN"
     gene            complement(7123..7362)
                     /locus_tag="VGA78_00800"
     CDS             complement(7123..7362)
                     /locus_tag="VGA78_00800"
                     /inference="COORDINATES: protein motif:HMM:NF013286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEX9892422.1"
                     /translation="MNTSEILDRIEQALNTLRPYIASHRGHVEVVDFDDQDGVLLLRM
                     GGTCQGCAASSITLRQGIEVRLRETVPEVRQVLSV"
     gene            complement(7404..8444)
                     /locus_tag="VGA78_00805"
     CDS             complement(7404..8444)
                     /locus_tag="VGA78_00805"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEX9892423.1"
                     /translation="MTLTLSVAKRDAARAVGAALAGAQRIALTTHVNPDGDGLGSEVA
                     LAHLLRAAGRDVVIVNPTATPSRFEFLFRDLPGVDRHREAIKELRRADLICVLDIADT
                     GRLGSLGATLSQHRAPVICVDHHASPGTLPPGPSYVDPGAAATGELIYELALANGWPV
                     TVPVARALYVALLTDTGGFRFSNTHPRTLRVAADLLETGIDPESIYLDVYATAPEGRP
                     RLLAETLQTLVVERDLGLAWVTVPPGAMERYDLTPDDLDGVVEHPRSIAGVRLAILFR
                     EMSQGRVKVSLRSVGDVDVARFASQYGGGGHSKAAGVALPGSLAEVQETVLTAAREYL
                     LKWRRITGRRDA"
     gene            complement(8497..9936)
                     /locus_tag="VGA78_00810"
     CDS             complement(8497..9936)
                     /locus_tag="VGA78_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9892424.1"
                     /translation="MSLFRRKSIATLQAEAGAEQGLRRALGAWNLTLLGIGAIIGTGI
                     FVLTGTVAAQNAGPAVVLSFVLAGVVSVFAALCYAEFASTVPVAGSAYTYGYATLGEL
                     LAWIIGWDLILEYALSATTVAIGWSGYMVRLLNTLGIGLPPELTAARGAVLTLADGST
                     VTALFNLPAVIIVALVTTLLVIGVKESATLNNVVVFIKVGVVLLFIALAAKAVNPANW
                     TPFIPPNAGPREAFGVTGIVAGAGVVFFAYIGFDSVSTAAQEAKNPQRDMPIGIITSL
                     LVCTVLYIIVSAIATGVVPYAQLDVPDPIAKVADAAGLGLVTDLITVGAIAGLSSVIL
                     VQLYGQSRIFYTMANDGLLPPWVAKIHPRFRTPWITQIVVGVAVAFPAAFLTVREAAS
                     LVSIGTLLAFAIVSAGVLVLRRREPNLHRPFRTPLVWFVAPMGVISALYLMTGLPLRT
                     WMRLVIWLAIGLVVYFLYGIRHSRLAKQS"
     gene            complement(9933..10064)
                     /locus_tag="VGA78_00815"
     CDS             complement(9933..10064)
                     /locus_tag="VGA78_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892425.1"
                     /translation="MRTTALLFMLGAWVFVLGLTFWSFRKLMSTPQDEKLPPPGSIP"
     gene            complement(10061..11650)
                     /locus_tag="VGA78_00820"
     CDS             complement(10061..11650)
                     /locus_tag="VGA78_00820"
                     /inference="COORDINATES: protein motif:HMM:NF012435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892426.1"
                     /translation="MSDPAPPRERWGSRIGLILAMAGNAVGLGNFLRFPRQAVENGGG
                     TFMIPYFIAFLLVGIPLMWIEWGVGRHGGQHGEGSTPGMFNSLWKHPVAKYLGVLGLF
                     MPFIVLCYYCYIESETLAWTFFSLIGSTQGLDQDSMRQFLNSYQDLSDPSVHATWVPF
                     AFFVVTIGVNFWVVSRGLSGGIEKLAKIGMPILFIFAAILVVRVLTLPAQSVADAAGC
                     AAGAMCRPSDGLNFMYTPDWKALGNPGVWLAATGQIFFTLSVGMGSLQAYASYLKKDD
                     DIVLSGVATAATNETAEVVLGGSLAIPAVVTFFGVTGAVAIARGGSFDLGFIAMPLVF
                     NQLPGGQLMSILAGFMWFGLLFFAGITSSVSMITPVLSFVEENFGLTKKRALAVIGSV
                     AVLLGLLHVTYNARGFLAEWDYWAGTFGLVILALVESIIFIWVFGPDNAWRELHQGAS
                     IRIPRFFKPILTYVTPLFLLVMMIWWTKDEAIPTLLFDGIPEDQHGVRTASRLVMIGV
                     LLVQLWLIRAAWARRARKGAA"
     gene            complement(11875..13335)
                     /gene="guaB"
                     /locus_tag="VGA78_00825"
     CDS             complement(11875..13335)
                     /gene="guaB"
                     /locus_tag="VGA78_00825"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX9892427.1"
                     /translation="MSVILPDQGLTFDDVLLVPRHSTVHPRDVSTTSWFTRGIPLHIP
                     VISAAMDTVTESDMAIAMARAGGIGVIHKNMPVDRQGAEVDRVKRSESGMILNPITLG
                     PDRPLREAAALMKRFSISGVPIVDGQGRLIGIVTNRDLQFERNLEQPIHQAMTREKLV
                     TAPVGTTLEEAERILAKHRIEKLPVIDGQGVLRGLITVKDIFKRQQFPGANKDEHGRL
                     RVAAAVGSGPDALTRARALVGAGCDVIVVDSAHGHSEGVLRAVAQLRETFPDTQLVAG
                     NVATEAGAAELVRRGVDGVKVGIGPGSICTTRVVTGVGVPQITAIMDAVRGASDVPII
                     ADGGIKYSGDIVKAIASGAASVMMGSMLAGTEESPGESILAEGRRFKMIRGMGSLGAM
                     QEGSADRYFQEGEISPAKMVPEGIEGRVPYRGPVSDVLFQMVGGIRSGMGYCGVVDIQ
                     GLQRDVAFLRITAAGLRESHPHDVTITREAPNYSVS"
     gene            complement(13435..>13819)
                     /locus_tag="VGA78_00830"
     CDS             complement(13435..>13819)
                     /locus_tag="VGA78_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892428.1"
                     /translation="GAVMNELLKQRIARRLEALSDERGYQILDYVEFIESKYAERSAA
                     GGFFSKLTETAEDTMRAVGLPIKAVSGTMGLMESAGKVMKGVAAAAQSVVDEAVKAAG
                     SQESRSANRETPLPPQDGSEGPKPA"
BASE COUNT         2392 a         4659 c         4582 g         2186 t
ORIGIN      
        1 cgccgcgcgc agttgatccg gtccggtgat gccgcattcc tgttccagca gccgccatcc
       61 atgggttgag acaatgagcc agaccggcag agcttgctgc gccagctgct cgagcaggcg
      121 taccgcatag ggcgcacccg atgcgccggt caccgccagc acgatcggca gtcgcgggtt
      181 cagcgtcccc tccggttcgg cgtgggcgtc ttggggggat gcttcggaac agcgggtcga
      241 aggcggtcga agcgggtcga agggggtcga agcgagtcaa cctgcttcga ctgccttcga
      301 ctcccctcga ccgtcttcga ccgtttcata gaagcacgtc gatcaacgcg aacccgaaga
      361 cagtcaccga catcaccgcg ttcaggttga agaacgccgc atcgagccgg gagaggtcgc
      421 cgggccggac cagccggtgc tcgtagacca gaatgaccgt cgccacaccg atcccggcgt
      481 agtaccaggc cccgaacccc gcaccccagc cgaacagcat cagggccgga atggtgatcg
      541 cgtggagcga cttggccaac cggatgctgc gggcccggcc cagccgcacc accgcgctgc
      601 caagcccggc cccccggtcg aactcttcgt ccggcaaggc gtagaagatg tcgaacccgg
      661 cgacccaggt cattaccgca acggtgatcg ccagcaacag ccaccaggga tcgctccacc
      721 caccggtgac cgccagccag ccgcccaccg gggcgatgga cagactcagg cccaaccaca
      781 ggtggggcca ccaggtgaac cgcttgctca agctgtaggc catgacccag gccagcgcgg
      841 cggggctcag ggcgaagcac aacggcgaca gctgccaggc cgagaacaga aacacgaccg
      901 ctgcaaggac caccgacatc caggcctgcg ccagcgacag cttcccttgc ggcagctccc
      961 gcccccgggt gcggggattg gcggcgtcga gggcgcggtc ggcgattcga ttgaacccca
     1021 tcgccaccca acgcgcggcg gtaaaggcga ccgcgaccag cagcacggtg cgcccgctca
     1081 ccggggtgcg gcgtgacgcc gccaggacgc ccagaaacgc gaaggggagc gcgaagaggg
     1141 tgtgcggcaa cttgacgaag ttggcgtaac ggaccagcag cgactcgccc cgcaggacct
     1201 ggccttcggc gggaaggacc tgggtttcgc ggctcacggc ttccgtccca cgtggcaagc
     1261 gcatattccg ccggtgaggc gacggaagtg aacctcggtg aagccggcct gccgtatgcg
     1321 ttccgccagt gcaacgggct cgggaaacgc catcaccgac tctggaaggt acgtgtacgc
     1381 ggtcgtatgt ttcgacacga gacgaccgat cagcggcaac accaggcgga agtagaagga
     1441 gtagagcgcg cgaagcggtt gccgcggcgg ggtggtgaac tcgagaatga cgaggcgtgc
     1501 atcgcgcttg agcacccgcg ccatttctcg gagtccggcg tcgagatccg ccaggttgcg
     1561 cacgccaaac ccgaccatcg cgccttcgaa gcggccggcg gtgaacggga gttccaaggc
     1621 gtccgcggtc accgggatag ttcggggcgc cttacgcttg cccagcgcca gcatcggctg
     1681 cacgaaatcg gcggccacca cctgaccggt gaagccgctc cgccgcgcca gcgtcgcggc
     1741 caggtccatc gtaccggcgc acacatccag gtaccgccct ccgggcgcgc gttcccagcc
     1801 gagctgccgc actgcggccc ggcgccagag gcggtcgata ttgagactga ggagatggtt
     1861 gaggaaatcg taccggggag cgatggcggt gaacacgtcg cggacatacg tccgtttccc
     1921 gctcccctcc acccgctccc ccttccccac atctccgcgc aagcctcggt cggtggccaa
     1981 catagcgcgg caatgtagcg tgccgcgaaa ccccggtgca acccgcggac tcgggcatgg
     2041 ctgagccgcg agctccgctc aattccgctt cggaccagga tgtggtcgcc cgggcccgcg
     2101 atggcgagga agccgcccat cgcgagctgg tgcggcgcta cgagcgaccg gtcttttccc
     2161 tcatctaccg catggtccgc gaccgggaga ttgctgaaga tctgtcgcag gaaacgttca
     2221 tcaaggtctt gaacgcgatc gcctcctacc ggcccgagtt caaattctcg tcctgggtct
     2281 tcaagatcgc gaacaacacg gccatcgatc accttcgccg caaagagctg gatacgctgt
     2341 cgctggaagg atcgccccat gccgccactc cggaggcgat cgaggcgacc gcactgcagc
     2401 tcggcaccga acggtcctcg cccctggacc acgtcgccgc ccgcgagctg ggaggcgaaa
     2461 tcgaggccgc catcaaccgg cttcgccccg agtatcgcag ttgcattctg ctccgtcacg
     2521 tcgaaggccg ggcctatgag gaaatcgccg aaatcctcgg cctgcccctc ggcacggtga
     2581 agacctacat ccaccgggcg cgcaatgagc tccgggtgat gctggcccat cttcgcgagt
     2641 gaaacccgag attccttcac gccgtatagg agggcgcatg acgacgacgc cgcatctcac
     2701 acccgacgat ctcgatgccc tgttggtagg gtcgatgagc gcatccgtcc gcacccacct
     2761 gggtgaatgc gcgctgtgcc gctcgctggc cacgaccgac cgggccgtaa tcacggtgct
     2821 ggagcggctc cccaggttct ctcccagtcc tgggttctcc gaccgggtca tggcccgcgt
     2881 cagtgtcgcc aaggcctcct cgcgttccat tctgggactt cgggttcgcg tcccaaccgg
     2941 gcggcgggct tggctcgccg cagcggtcgg ggtcctcctg ctcgccggtc tcaccaccag
     3001 cgtggtctgg tccctcggca atcgcgatgt gctcgcgggc tggggtcagc agacgctgtc
     3061 actgctcgac ggttggctct ggctcggagt gcagaccctg gccgccaacc tgaccgagca
     3121 gccgtggtac cagccggtcc gcagtgccct cggtacgccg gcccggctgg ccgtcgcggg
     3181 ggtcgcgatc gtggtcacct ggagcgccgg gatgctggcc ctcaagcgac tggtcgccct
     3241 cccctcccgc actgcctaag ggggtcgcca tgcggctccc acaacggtcg aagagagtcg
     3301 aagtcggtcg aaggtggtcg aagagggttt tcctggcttt agctctcatt cctctctggg
     3361 tctgctcggc gtccgcaact gcgctcgtag gaccgggcga gaagctcgcc gggctgatcg
     3421 aatggttcgg tgattggcag caggaccggg ccgatccccc tcaggccatt cccgcggcgg
     3481 gccccaccgg tccgaccctc cctctcgatc gcctcgatga cccatcagcg atggaacgat
     3541 cgctgcgaca attgctggag cgacggggtc cgatccaatt gacggtgccg gagggtcggg
     3601 cctggatggg cgatttcggg ttgggcaccg gggacaccct ccgcggtcat ctgctcgtgc
     3661 tccggggcac cgcccagatc ttcggccggc tggaaggcaa cgtggttgcg ctggatggag
     3721 atatcgtggt ccatcggggc ggctcggtca ccggtgacgc gctggcgatt tcgggcaagg
     3781 tccgcgacgc cgatcgcgcc atcgaaggcg aggtccgcgc actgagccag gtggcgacgc
     3841 cgccgccccg ggtggggccg ctgagcgcgc tccgtcgcgg agccgggctg gcgggcgtct
     3901 tcctcatcct gagcctcatc ggcttcggcc tggtgacttt cgcccggcca tcgctcgaaa
     3961 ccgtgtccga tacggtgcgc cactcgctgg ggcgcgcgtt tctggtggga ctgctggccc
     4021 aggtcctggt gataccgacc ttcggaatgc tggtggtggg gctggccctc accgtggtgg
     4081 gcgttctcct cattcctttc gcggtcgcga cctacctgct gctggtgctg gcggcactgg
     4141 tcctgggcgt catcgcgatg gcgcacgcca cgggcgaaac gtatacccgc cggcgcatgg
     4201 cgctgggggt ggtggtttcg cctaacagtt atcgctacgt caggctgggc ctgctggcgc
     4261 tgctggcgct ctgggtagtc tgggtggtgt tcggctgggt tccgatggcc ggctcgctgg
     4321 tgttcggcgg cgcggccctg gtgacctggc tcatgaccac tgttggattc ggtgccagcc
     4381 tgctgagccg ggccggcgtt cggcccgatt tcgccggccg catcatccca tcggaagcgc
     4441 tgaccgacga gtacctctgg gccaccccgc agctgggcgt gcccgcggtc aagcggccga
     4501 ccacgccgaa gggaccatga cagcggtcga aggcggtcga agcaggtcga agcaggtcga
     4561 acgtggttcg actggcttcg actgtcttcg actgccttcg acctgcgcgc tgctggtgct
     4621 cggttggggg agccagagtt ctgcgcagat catgcgcgaa tacgaagcgg cccggccggt
     4681 tcgaggcgaa cgccagatga cggtgaacct ggatttcgcg gccggtggac tgcgtttgat
     4741 gccgggcccg gccggtacgc tataccggtt ggaagctcgc tacgacaccg agcgtttcgc
     4801 gccggtcagc gtgtacgact cccggagggg ccgcctgacc ctggggctcc gcagcaccgg
     4861 cgcgtttggg atccgggtca cctcccgccg gcacctcgat cagcaggcga cggtctggct
     4921 gtcaccggag gtcgagctgg ggttggaggt gaccctgggg gccgcggaaa gccggatcga
     4981 cctgggggga ctccggctgc gcgatctggt gctgcgcgcg ggcggaagcc gtacccggct
     5041 ggtcttctcc cggccgggcg tgggggtctg ccgcgaagcc gtgctcgagg ccggagcggg
     5101 cgagctggtg gtggatcgct tcgccaacgc cggttgtcgg cggctccggc tgaacggcgg
     5161 agtgggcgtg gtctcgctcg atctgggggg ggcgctcacc ggcgaattga ccgccgagct
     5221 ggggatgacc atgggtgagc tgaccttgcg cctgccccac ggcgccggcg tgcggctgac
     5281 gctcgatcgg ttcctggcat cgtttcagcc ggccggcttc acccgccagg gcgagcagtt
     5341 cgtgacgccc gactacgaga gcgccgtccg ccggatcgac ctgcgggttt cgaccgcggt
     5401 gggcgcggtc aaagtggagt ggtactgaac ctggttccgg gagctacttg cccagggctg
     5461 ctctgatcct ggccaggtga tgaaagctgt gccgcagggc gtgatcctcg atgaaaaact
     5521 gggtggtcag cggcgcatca ccattgagcg acaccggagc cgcccggtcc aattcctcgt
     5581 cggtgaactg ccgcacggcc tgggcggcgg tccggctgtt cctcaagagc aactcgacgg
     5641 cttctcgctg actcacccgg ttgtggtcgt gggcgtgttt ggcgttcatg tcggccacaa
     5701 cgctccaggt cactcccttg atcggctggc cggaccggag tacctgcgcc agttcgatct
     5761 cgatgggata gacgctcgcc acgtgatgca ccagcacgcc gaccgtacgc ccgtcacggg
     5821 ggagttcggt cgcccattcc gactcggaga gtgtctcggc gaaggccgcc agagcggcag
     5881 ctccctgctc gatacgggcg gcgagtgttt cggcgcgtgt gcccatgaag tctcccctcc
     5941 agagccgatg tctcgtgact cgtgattgac gactagttgt tcagcaccgg cagtaccaga
     6001 cccttggcac tcacctgatt gactacctcg cccgcgatgc gaagcagcgc ctgggcggcg
     6061 ggcgaatcgg gagcagcagt caggaccggc tggccccggt cggccagcgc ggccagatcg
     6121 ggttgcagcg ggacccggcc caacagcggc acgcccagtt catccgccag ccgctggcct
     6181 ccgcccgacc cgaagaactc ccaccgttgt ccggtggcgg ggtcggtgaa tccgctcatg
     6241 ttctcgacga tccccagcac cgggacgttg acccgctcga acatcttggc tcctcggagc
     6301 gcgtcaccca ccgccatttc ctgcggcgtc gtgacgatca cggctccgct cacgggggtg
     6361 ctctgaacca gtgaaagctg agcatcgccg gttccgggcg gcatgtcgac gatcagataa
     6421 tccagctggc cccactcgac atcgcggagg aactgctgga tcaccttcat gatgatggga
     6481 ccgcgccaga tggccggtgc gtcccggtcc acgatcagac ccagcgagat caggcggacg
     6541 ccgaaggcct ccaacggctg gatccgtccc ttgatcaccg gcggccgctc gaacaacccg
     6601 aacatccgtg gcacgttggg accgtagata tcggcatcca ttattcccag ccgaagcccc
     6661 cgctgggcca gagccaccgc caggtttacg gccacggtgc tcttgcccac accgcctttg
     6721 ccggaggaga ccgcgatgac ccgtccgagg ttgggcattt cctgcgggct gggagcggga
     6781 actgccccaa ccgactgggg ggcgccggga ggaccgtgcg tcaccttgga gggacccgcc
     6841 gggtccatca cgttgatctt tacctcgctc acgccatcga tcgcctggag cgccttgcgc
     6901 gcctcacgaa ccagcgtggc cggatcctcg cgcgccagga ggaaagtgaa ggagaccctg
     6961 ccctcgggag tgaccgcgag atcacggatc atccctgcgg aaagaaggtc gttgtccaat
     7021 cgggggttgt ggattcgggc cagggccgcg gccacccgag cgtcgagggt catggagctc
     7081 tcgtcgacca ccttcgaccg ccttcgaccg ccttcgactg tttcatacgg acaggacctg
     7141 ccgcacctcg ggaaccgtct cccgcaaccg gacctcgatg ccctgccgga gcgtgatgga
     7201 cgacgcggca cagccctgac aggtgccgcc catccggagc agcaggacgc cgtcctggtc
     7261 atcgaaatca accacttcca catggccccg gtgggaagcg atgtacggcc gaagcgtatt
     7321 cagagcctgc tcgatccggt ccagaatctc agaggtattc atcaccctgc aaacttaacg
     7381 aactcgatac cgcggtgagc cgctcaggcg tcccggcgac cggttatccg ccgccatttc
     7441 aggaggtact cccgggccgc cgtcaggacg gtttcctgga cttccgccag gctgccaggg
     7501 agtgcaaccc cggccgcttt ggagtgccca ccgcccccat attggctggc gaaccgggcc
     7561 acatcgacat cgcccaccga gcggagggac accttcaccc gaccctggga catctcccgg
     7621 aacaggatcg ccagccggac gccggcgatg gatcgaggat gctcgactac cccgtccaga
     7681 tcgtcggggg tgaggtcgta ccgttccatg gcgccggggg gaaccgtcac ccaggccagg
     7741 ccgaggtctc gctccaccac cagggtctgg agggtttccg cgagcagccg gggccgacct
     7801 tcgggggccg tggcatacac atcgagatag atcgactcgg gatcgatccc ggtttccagc
     7861 aggtccgccg cgacccggag ggtccgggga tgggtgttgc tgaagcgaaa gccgccggta
     7921 tcggtcagga gggcgacgta cagcgcccgg gccaccggga ccgtcaccgg ccatccattc
     7981 gccagcgcca actcatagat cagctctccc gtcgccgccg ccccggggtc gacatagctg
     8041 ggaccgggcg gcagtgtccc ggggctggcg tgatggtcca cgcagatgac cggcgcccgg
     8101 tgttgggaga gagtcgcgcc cagcgagccc agccggccgg tgtccgcgat gtcgagcacg
     8161 cagatcagat cggcgcggcg gagctccttg atggcttcgc gatggcggtc cactccgggc
     8221 agatcgcgaa acagaaactc gaagcgggag ggcgtggctg tcgggttgac gatgaccacg
     8281 tcacgtccgg cggcccggag cagatgggcc agcgccactt cgctgcccag gccgtcgccg
     8341 tcgggattga cgtgggtggt gagagcgatg cgctgggccc cggccagcgc cgctccgacg
     8401 gcccgcgccg cgtcgcgctt cgctaccgag agggtcagcg tcatggggcc ggggtcatgc
     8461 cgaatccagc gaaaagggag gcaagtgctc gagtcactag ctttgcttgg ccaggcgtga
     8521 atgccggatg ccataaagga agtagaccac cagaccgatc gccaaccaga tcaccagccg
     8581 catccaggtc cgcagcggca atccggtcat cagatacaac gcggaaatga cccccatggg
     8641 tgccacgaac cagaccagcg gcgtccggaa tgggcggtgc aggtttggct cgcgccggcg
     8701 gagcaccagc accccggccg acacgatggc gaaggcgagc agcgtcccga tcgagaccag
     8761 cgaggccgcc tcccggaccg tgagaaatgc cgcggggaaa gcgacggcca ctccgacgac
     8821 gatctgggtg atccacgggg tccggaaccg ggggtggatt ttcgcgaccc acggcggaag
     8881 cagtccatca ttggccatcg tatagaagat gcgcgactgg ccgtacagct ggaccaggat
     8941 gacggatgag agtcccgcga tcgctccaac cgtgatgaga tcggttacca gccccagccc
     9001 cgcggcgtcg gccaccttgg cgatgggatc gggcacgtcg agctgggcgt agggcaccac
     9061 cccggtcgcg atggcggaga cgatgatgta caacacggta cagaccagca acgaggtgat
     9121 gatgccgatc ggcatgtccc gttgggggtt cttcgcctcc tgcgccgcgg tactgacgct
     9181 gtcgaacccg atgtaggcga agaagaccac cccggcgccc gccacgatgc cggtgacccc
     9241 gaaggcctca cggggtccgg cattaggagg aatgaacgga gtccagttgg ccgggttcac
     9301 cgctttcgcc gccagcgcga taaacaggag aacgacaccg accttgatga acaccacgac
     9361 gttgttgagc gtcgccgatt ccttcacccc gatcaccagc agcgtcgtaa ccagggcgac
     9421 gatgatgacg gcgggaaggt tgaagagggc cgtgacggtg gacccatcgg ccagcgtgag
     9481 caccgccccc cgggccgcgg tgagctccgg ggggagaccg atcccgagcg tgttcagcag
     9541 ccggaccatg tagcccgacc agccgatcgc gaccgtggtg gcggagagcg catactccag
     9601 gatcaggtcc cacccgatga tccaggcgag gagctcgccc agggtggcat aaccataggt
     9661 gtaggcgctc cccgccaccg gcaccgtgga cgcgaattcg gcgtaacaga gggcggcgaa
     9721 gaccgacacg acacccgcca ggacgaacga cagcaccacc gcggggccgg cgttctgggc
     9781 ggcaacagta ccggtgagaa cgaagatgcc ggtcccgatg atggcgccga taccgagcag
     9841 ggtcagattc cacgccccga gggcgcggcg gagtccctgt tcggcccccg cctcggcctg
     9901 gagcgtggcg atggacttcc gccggaagag gctcacggga tgctgcccgg gggcggcagc
     9961 ttctcgtcct gcggagtgct catgagcttc ctgaacgacc agaacgtaag ccccagcacg
    10021 aagacccagg caccgagcat gaacagcagg gcggtcgttc tcatgcggcc cccttccggg
    10081 cccggcgggc ccacgcggca cgaatcaacc acagctggac cagcaggaca ccaatcatga
    10141 ccagacggga agcggtccgg acgccgtgct ggtcctccgg gatgccgtcg aagaggagcg
    10201 tcggaatggc ctcatccttg gtccaccaga tcatcatgac cagcaggaac agcggggtga
    10261 cgtaggtcag gatcggtttg aagaaccgcg gaatccggat cgaggcaccc tggtgcagct
    10321 cacgccaggc gttgtccggc ccgaagaccc agatgaagat gatcgactcg accagcgcca
    10381 ggatcaccag cccgaaggtg cccgcccagt agtcccactc ggccaggaag cctcgggcat
    10441 tgtaggtcac gtgcaggagc ccgagcaaga ccgccaccga gccgatgacc gctaaggccc
    10501 gctttttcgt gagcccgaag ttctcttcca cgaaggacag cacgggcgtg atcatcgaca
    10561 cgctggaggt gatcccggca aagaacaaca ggccgaacca catgaatccg gccaggatcg
    10621 acatgagctg accaccgggc agctgattga agaccagcgg catcgcgatg aagcccaggt
    10681 cgaaactccc gccccgggcg atggcgaccg cgccggtcac gccgaagaag gtcaccaccg
    10741 cgggaatggc cagggagccg cccagcacca cctcggccgt ctcgttggtg gcggcggtgg
    10801 cgacgcccga aaggacgatg tcgtcgtcct tcttaaggta ggacgcgtaa gcctggagcg
    10861 accccatccc caccgaaagg gtgaagaaga tctgccccgt ggcggccagc caaacgccgg
    10921 gattgcccaa cgccttccaa tccggggtgt acatgaagtt gagtccgtcg gagggacggc
    10981 acatggctcc tgccgcacac ccggccgcat ccgccaccga ttgggccggc agggtcagga
    11041 ctctgaccac cagaatggcc gcgaagatga acaggatggg cataccgatc ttggccagct
    11101 tctcgatccc gcccgagagg ccgcggctca ccacccagaa attcacgccg atcgtgacca
    11161 cgaaaaacgc gaacggcacc caggtagcgt gcaccgacgg gtcggagagg tcctgatacg
    11221 agttgagaaa ctggcgcata ctatcctgat cgagtccctg agtggacccg atcagcgaga
    11281 agaaggtcca ggccagcgtc tccgactcga tgtagcagta gtaacagagc acgatgaacg
    11341 gcatgaacag cccgagcaca ccgaggtact tcgccaccgg gtgcttccac agggaattga
    11401 acatccccgg cgtcgaccct tcgccgtgct gaccaccgtg ccggcccacg ccccactcga
    11461 tccacatcag cgggatcccg accagcagaa acgcgatgaa gtaggggatc atgaacgtcc
    11521 cgccgccgtt ctcgactgcc tggcgcggga accggaggaa gttgccgagg ccgaccgcgt
    11581 tgccggccat ggcgaggatc aggccgatgc gcgagcccca tcgctcgcgg gggggggcgg
    11641 ggtcgctcac gtactctccc ttggtgaggg ttccaggtgc caagttccgg gtgccgagtg
    11701 aagtactagg tgcggtgcca ggtgccccgt tccggtggat ggcccccgag gctacgcgct
    11761 gtcgccaggc ggcacctggc aggcggcacc gcacgcggaa ccgcacctgg caccgcactc
    11821 ggaacccgga accacggaac ccggaacgca gctgagcctc agcccagctg acgctcagct
    11881 gacactgtag ttaggcgctt cccgcgtgat cgtcacatcg tgcgggtgcg attcccgcag
    11941 tccggcggct gtgatcctca ggaaggcgac atcgcgttgg agaccctgaa tgtccaccac
    12001 cccgcagtac cccatgccgc tccggatgcc gcctaccatc tggaatagaa cgtcggaaac
    12061 cggtcctcgg taaggcaccc gcccttcgat gccctcgggt accatcttgg ccggcgagat
    12121 ttcgccttcc tggaagtaac ggtcggccga gccctcctgc atcgcgccca gactgcccat
    12181 accccggatc atcttgaagc gccgaccctc ggccaggatc gactcgcccg ggctctcctc
    12241 ggtaccggcc agcatcgatc ccatcatgac gctggccgcg cccgaagcaa tggccttcac
    12301 gatgtcgccc gagtatttga tgccgccgtc cgcgatgatc gggacgtcgc tggcgccccg
    12361 gaccgcatcc atgatggccg tgatctgcgg cacgcccaca ccggtgacca cccgggtggt
    12421 gcagatgctc cccggaccga tgcccacctt cacgccgtcc accccgcgcc gtaccagctc
    12481 ggcggccccg gcctcggtgg cgacgttccc ggccaccagc tgggtgtcgg ggaaggtctc
    12541 ccggagctgc gccaccgcac ggagcacgcc ttcgctgtgc ccgtgggccg agtcgaccac
    12601 gatcacgtcg cagcccgcgc cgaccagggc ccgggcccgg gtcagcgcat cgggcccgga
    12661 gccgaccgcc gcggcgactc ggagccggcc gtgctcgtcc ttgttggcgc cgggaaactg
    12721 ttgccgtttg aagatgtcct tgaccgtgat caggccccgc aggacgccct gcccgtcgat
    12781 caccggaagc ttctcgatcc ggtgcttggc caggatgcgc tccgcctcct ccagggtggt
    12841 ccccaccggg gccgtgacca gcttctcccg ggtcatcgcc tgatgaatgg gctgttccag
    12901 gttgcgttcg aactgcagat cgcggttggt gacgatcccg atgagccgtc cctgcccatc
    12961 cacgatcggg accccggaga tgctgaaccg cttcatcagc gcggccgctt cgcgcagcgg
    13021 ccgatcggga ccgagcgtga tgggattcaa gatcatcccg ctctcgctcc gcttgacccg
    13081 atcgacctcg gccccctggc ggtccaccgg catgttcttg tggatcaccc cgataccgcc
    13141 ggcccgcgcc atggcaatgg ccatgtcgga ctcggtgacc gtgtccatgg ccgccgaaat
    13201 gaccgggatg tggagcggga tgccgcgggt gaaccagctg gtggtggaga cgtcccgggg
    13261 gtgaaccgta gaatgccgcg ggacgaggag aacgtcgtcg aaagtgaggc cctgatccgg
    13321 aaggatcacg ctcatgcgga gcggtcccgg aggggaaagg actggattgt tcgccggatt
    13381 gggggcgtgc cggggagcaa catcccgaaa gcttaggagg cacccccctc agggtcaagc
    13441 gggcttgggg ccctcggagc cgtcctgggg cggaagaggg gtctcgcgat tggcgcttcg
    13501 ggactcctga ctcccggccg ccttcaccgc ctcgtccacc accgactgcg ccgccgcggc
    13561 cacgcccttc atgaccttcc ccgcgctttc catcaggccc atggtaccgc tcaccgcctt
    13621 gatcggaagc cccaccgccc gcatggtgtc ttcggcggtc tcggtaagtt tcgaaaagaa
    13681 gcccccggcg gcactccgct cggcatactt gctctcgatg aactccacgt agtccaggat
    13741 ctggtagccc cgctcgtcgc tcagcgcttc gagacggcgc gcgatccgct gcttgagaag
    13801 ctcgttcatt accgcccct
//
LOCUS       DASWKS010000022         7371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_378896, whole genome shotgun sequence.
ACCESSION   DASWKS010000022 DASWKS010000000
VERSION     DASWKS010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7371
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378896"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VGA78_00835"
     CDS             complement(<1..830)
                     /locus_tag="VGA78_00835"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEX9892429.1"
                     /translation="MKRIPVVLTLAWLAGCDEGATTPEPPPGLSIDAQLRASIGNWGI
                     VPIGPMPAQNPAQVALGRALFFDKILSGNRDIACATCHEVATSLGDGRSLSVGTGGTG
                     VGPARRLGPGRQFTPRSAPSLLNAGLGLFYIFWDLRLSGAHGQFVTDSNVTLPPGLPN
                     ILTAQAMLPVLNRQEMRGVPGDVDVFGNPNELALIGDKQPAEVWNALVDRLLAVSEYV
                     AMFNAAFPGSGRPRFEHAARALATFQMEEFIRTRSPFDRYLDRDDAAMTLEQKRGGLL
                     "
     gene            complement(894..2393)
                     /locus_tag="VGA78_00840"
     CDS             complement(894..2393)
                     /locus_tag="VGA78_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892430.1"
                     /translation="MRARAFPLGTFLLATWATPAAAQLISIRTVPISQSHQFDLFPSL
                     RGAMGGVSLAVDDSLHDPFGNPAKGARLGASRFFGSPGVYSVSSGAGAGRSLPLGAWV
                     RSGRWFGGAAVAFQQIDLSENTNPIFPLSCPACDARGGIELPAADRTQGNAFGYALLG
                     MTLPGTGLSLGASLSWAGLHAVDGVDLLYPGSVRLRQNGHSLDLRVGALKQWQGDRAL
                     SAVVLHNRFASTHDVFYLDSFWDPGTQQFAQRPRPEQNLDHTNTWGAQVEYTHPLPEP
                     GWRMGWVATTNLMSHPKIPNYEIQNIPRDPGNSEAFNLGVGVSKSDASSTVALDLLYQ
                     PIWSYTWADAAAPITTSRGSTIPAGGKTIENRFRFSNALLRLGFAQDMAFDEATKAVG
                     LQLGLAVHRIDYSLVQDDNVQVRTRRQNEDWIEWTPTWGLSLRFPAWELRYRGSVTHG
                     TGRPGVQSGNDFAVPAAEAGTILVAPSGPLTLTGVKVMTHQVAIVFPFR"
     gene            2599..3144
                     /locus_tag="VGA78_00845"
     CDS             2599..3144
                     /locus_tag="VGA78_00845"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9892431.1"
                     /translation="MKEENDGVLLRRVLEGETRVYARLVERYRERLGRYALRMLGNQA
                     DADDALQDTFIRAYRSLSRCNGSDGFGPWVFGILVNRCRTYAARRALTEGIMVRSEVA
                     LATASVESSEGRDTLRDAIQRALRQLPPEQREAFLLKHVDDLSYETMETVTGVRSATL
                     RMRVFRARDELRKLLAEMVRD"
     gene            3137..3709
                     /locus_tag="VGA78_00850"
     CDS             3137..3709
                     /locus_tag="VGA78_00850"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HEX9892432.1"
                     /translation="MTDRDDPLEAIIEILKEPADLSPDLTDRVMSEIDRLSPPGVVAG
                     PGLGPWWRRRWTIRLSPLGGLGLAAGLGLLLLAAQLAGRRTNPAASPIAVVSAAGRLT
                     QFVLIAPDARAVTVVGDFNDWSMSATPLERAEGDGVWYVTVPLTPGRYRYAFVVNGTI
                     WRNDPEAPAAEDEFGRPNSVVTVEERDRAL"
     gene            3699..4349
                     /locus_tag="VGA78_00855"
     CDS             3699..4349
                     /locus_tag="VGA78_00855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892433.1"
                     /translation="MRCSRIPVLFLLVALPSLANGQEPRLVGRVPDPARAQVDAVLDG
                     ARARGLPVEPLVDRALEGAAKGAPPGLIVAAVIRLRDELVVVRGAFGDTASTAELTAG
                     ASALRAGAGAEDLARLRRLRPGQPLTVAAAVLADLVAAGVPADTAVGAVLALAPGLGD
                     AEYIAFRRNVQRDIELGASPAAALGVRLRVADEMANAPNAPNTGTGSTGGRRKQKP"
     gene            4429..5487
                     /locus_tag="VGA78_00860"
     CDS             4429..5487
                     /locus_tag="VGA78_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen-binding domain-containing protein"
                     /protein_id="HEX9892434.1"
                     /translation="MADQVEGTLGLTGSIVEYDGFLASGAAVFTPALRFDSPRLVIAG
                     QGSWTLFESGNGILQGAAAAAWLAGSRGSWRLELSGSAGGSEYAAEPGVGHVLAGGRL
                     HLFGTSAGGWIGAHAGKSFGGPSGVPVELVVAGWSMKNRLAMVGTITTTRQGEARYLD
                     LLGAVRWTGVKAELEARGGARVSDGSTGVYGEISAAVPLSPWLAISLGGGKYPSDPVR
                     QILGARYASAGVRLRAFGPPARSVPVHTTGVLRGRLVPTSESGPPLEIGGSAERRMLR
                     VRAPGAISVELMGDFTDWVPVRLGQVMPGVWETQLPVPPGVHRVNVRLDGGPWSVPGG
                     ARLERTEFGGTVGIVVVP"
     gene            complement(5416..5832)
                     /locus_tag="VGA78_00865"
                     /pseudo
     CDS             complement(5416..5832)
                     /locus_tag="VGA78_00865"
                     /inference="COORDINATES: protein motif:HMM:NF024918.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
     gene            5912..6088
                     /locus_tag="VGA78_00870"
     CDS             5912..6088
                     /locus_tag="VGA78_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892435.1"
                     /translation="MAEPQAAPHPAEVVIELEDQVVEPGAQPLEQPVPRGEPVELVAV
                     NDEEPAAVGFVPDC"
     gene            complement(6160..>7371)
                     /locus_tag="VGA78_00875"
     CDS             complement(6160..>7371)
                     /locus_tag="VGA78_00875"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9892436.1"
                     /translation="FFLGEDTAFRAIRALPPDAKAEWCDGRLHLSGGFPVSRAQPLGR
                     DPAIEGYIELFRIAMDRRVRPDEDVGVPLSGGRDARHILLELCRAGRRPKLCLTLQPD
                     PPYPDEGAVAAEIARSVDVPHVVVAQGRSRIEAELQKNRLTNFCSDEHAWYLALGEYL
                     RGRVRHIYDGIGGDVLSAGLFLTVERLALFDAGRFEELAISLLATSESRIRLVAPGWQ
                     GRLGRDPAVARLAGELARHAEAPNPVGAFYFWNRTRREIALAPYRILNRSVEVLSPYL
                     DHDLYDFLVSLPASLFLDLDFHSETIRRAYPRYRDLRYEQKEVNPNLGAEQFRRFARE
                     TAAYLLRSSLARPAVRLAGSRFVLSRSLLGALVGSSSRFGWQLAAFAIYLLQLSSEME
                     RPQVEAVETGR"
BASE COUNT         1168 a         2426 c         2627 g         1150 t
ORIGIN      
        1 aagagcaggc cgccccgctt ctgttccagg gtcatggccg cgtcgtcccg gtcgaggtag
       61 cgatcgaacg gcgagcgggt ccggatgaac tcctccatct ggaaggtggc cagggcccgg
      121 gccgcgtgct cgaaacgggg ccggcccgat cccggaaacg cggcgttgaa catcgccacg
      181 tactccgaga cggccaggag ccggtccacg agcgcgttcc acacctcggc gggctgcttg
      241 tcgccgatca gggcgagctc gttgggattg ccgaacacat cgacgtcgcc gggcacaccc
      301 cgcatctcct gccggttcag gaccggcagc atcgcctggg ccgtgaggat gttcggcaaa
      361 cccggcggca gggtcacgtt cgagtcggtg acgaactggc cgtgcgcgcc cgacagccgc
      421 agatcccaga agatgtagaa cagtcccagg ccggcgttga ggagggacgg ggcgctgcgc
      481 ggggtgaact ggcgcccggg ccccagccgg cgggcggggc ccacgccggt gccgccggtg
      541 ccgaccgaca acgagcgtcc gtcgcccagc gaggtcgcga cctcgtggca ggtggcgcag
      601 gcgatatcac gattgccgct caggatcttg tcgaagaaca gcgcccggcc cagtgcgacc
      661 tgcgccgggt tctgggccgg catggggccg atcggcacga taccccagtt gccgatgctg
      721 gcccgcaact gggcatcgat cgagagcccc ggcggcggct cgggcgtcgt ggcgccctcg
      781 tcgcagccag cgagccaggc cagggtcagg acgaccggaa tgcgcttcat cggccaatct
      841 ccttgttcag gacttaggac ttaggactaa gcactcagcc cgtcctgtac gtttcaccga
      901 aacggaaaga cgatcgcgac ctgatgggtc atgaccttca cacccgtcag cgtgagcgga
      961 ccgctgggcg cgaccaggat ggtgccggcc tccgccgccg gcacggcgaa gtcattaccg
     1021 gactgcaccc ccggacgacc tgtcccatgc gtgacactgc cgcggtagcg aagctcccag
     1081 gccggaaacc ggagactcag accccaggtg ggagtccact cgatccagtc ctcgttctgc
     1141 cgccgggtcc tgacctgcac gttgtcgtcc tgcaccaggg aatagtcgat gcgatggacc
     1201 gcgagcccga gctggagccc gaccgctttg gtcgcctcat cgaatgccat atcctgggcg
     1261 aagcccagcc ggagcagggc gttcgagaag cggaaccggt tctcgatggt cttgccgccc
     1321 gcgggaatgg tgctgccgcg cgaggtcgtg atcggggcgg cggcatcggc ccaggtgtaa
     1381 ctccagatcg gctggtacag caggtcgagc gcgacggtgg acgacgcgtc cgacttggag
     1441 acgccgaccc ccaggttgaa ggcctccgag tttcccggat cgcggggaat gttctggatt
     1501 tcgtagttgg ggatcttcgg atgcgacatc agattggtgg tggcgaccca ccccatccgc
     1561 cagccgggtt ccggaagcgg gtgggtatac tcgacctgag caccccaggt attggtgtga
     1621 tcgaggttct gctccggccg cggccgttgg gcgaattgct gggtgccggg atcccagaag
     1681 gagtcgaggt agaacacatc gtgggtggac gcgaaccggt tgtgcagcac cacggcgctc
     1741 agtgcccggt cgccctgcca ctgtttcagg gcgcccaccc gcagatcgag ggagtgcccg
     1801 ttctgccgga ggcggacgct gcccggatag agcaggtcca cgccgtcgac cgcgtgcagg
     1861 ccggcccagg acaggctcgc tcccagggat agcccggtgc cgggcagggt catgcccagc
     1921 agcgcgtacc cgaaggcatt gccctgggtc cgatcggcgg ccgggagttc gatgccgccc
     1981 cgggcatcgc aggccgggca gctgagcgga aagatgggat tggtgttctc actcaaatcg
     2041 atctgctgga aggcgacggc agccccgcca aaccatcggc ccgaccgcac ccaggctccc
     2101 agcggcaagc tgcggccggc acccgctccg ctcgaaacgc tgtacactcc gggggagccg
     2161 aagaagcgac tcgcgcccaa gcgggcgccc ttggcgggat tcccgaacgg atcgtgcagg
     2221 gagtcgtcga ccgcgagcga gacgcctccc atcgcccccc gaagggacgg gaagagatcg
     2281 aactggtgtg actgggagat tgggaccgtg cgtatcgaaa tgagctgcgc cgcggccggc
     2341 gtggcccagg tcgcgaggag gaaagtcccc aacgggaacg cccgtgcacg cattcgccac
     2401 ctcgcttgca gagtgggatc ttactctcta tacccattca gctgggggaa cgtcaccacg
     2461 gtcggtcagt cgagcagtcg gtcagtcggt caggcggtcg gtagggccgg aagggtcgga
     2521 cggattccga ccgacttgac cgactgaccg accgagcccc tcttgtgacg ccagtcacca
     2581 acctggggta tttgaattgt gaaggaagag aacgacggag tgctgttgcg ccgggtgctg
     2641 gagggggaga cccgggtcta cgcgcggctg gtggagcgct accgggagcg tctggggcgt
     2701 tacgcactcc gtatgctcgg gaaccaggcc gatgccgatg acgccctgca ggacacattc
     2761 attcgcgcgt accgctcgct gtcccgctgc aatggaagcg atgggttcgg accctgggtg
     2821 ttcggcattc tggtcaaccg ctgccggacc tacgcggcca ggcgggccct caccgagggc
     2881 atcatggtga ggagtgaggt ggcgttggcc acggcctcgg tggagtcttc cgaaggccgc
     2941 gacaccctgc gcgatgccat ccagcgggcc ctgcggcagc tacccccgga gcagcgtgag
     3001 gcgtttctgt tgaagcatgt cgatgacctg agctacgaga ccatggagac cgtgaccgga
     3061 gtgcgctcgg ccacgctccg catgcgagtc ttccgtgccc gggacgagct gcgcaaactg
     3121 ctggcggaga tggtacgtga ctgatcggga cgatccactc gaagcgatca tcgagatcct
     3181 gaaggagccg gcggacctgt cgcccgacct gaccgaccgg gtcatgtcgg agatcgatcg
     3241 cctttctccg ccaggcgtgg tcgccggtcc gggcctgggt ccctggtggc gccgtcgctg
     3301 gaccatccgg ctgagccccc tcggcggtct ggggctggca gccggcctgg ggctcctgct
     3361 gctcgccgct cagctcgccg gacgacgcac caacccggcc gcctcaccaa tagcagtggt
     3421 aagcgccgca ggtcgcctga cgcagttcgt cctgattgct ccggacgcca gggcggtgac
     3481 ggtggtgggg gacttcaacg actggagcat gtccgccacg ccgctggagc gggcggaggg
     3541 ggatggagtc tggtatgtga ccgtgcccct cacaccgggc cgctaccgct acgccttcgt
     3601 cgtgaacggc accatctggc gcaacgaccc ggaggcgccg gctgccgaag acgagttcgg
     3661 tcgtcccaac tccgtggtga ccgtggagga gcgtgaccgt gcgctgtagc aggattccgg
     3721 tgctcttcct gctcgtggcg ctcccgtcac tggcgaatgg tcaggagccc cgcctggtgg
     3781 gccgcgtgcc cgacccggcc cgggcccagg tggacgccgt tctggacggg gcccgggccc
     3841 gcggactccc agtcgagccg ctggtggatc gggctctgga aggggcggcg aaaggcgcgc
     3901 cgcccggctt gatcgtcgcc gccgtcatcc gcctccggga cgagctggtg gtggtgcgag
     3961 gcgcgttcgg tgataccgcc tcgaccgccg agctcaccgc cggcgcaagc gcgctccgcg
     4021 cgggagccgg agcggaggat ctggctcggc tgcggagact gcggccgggt cagccgttga
     4081 cggttgcggc ggcggtgctc gccgatctcg tcgcggccgg tgtgccggcc gatactgccg
     4141 tcggcgcggt gctggcgctc gcgcccggtt tgggcgacgc cgagtacatt gcattccgcc
     4201 gcaatgtgca acgcgatatc gagttgggcg cttcaccagc cgcagcgctg ggagtccgtc
     4261 tccgggtggc ggacgagatg gcgaacgccc ccaacgcacc taacaccggg accggatcca
     4321 cggggggacg tcgcaagcag aagccgtagc gttgcgcctc gggtgacgct gggctgttgg
     4381 cgcgctggtc ttgcgctggc agcgtggctc gttccggccc ggtccctcgt ggctgatcag
     4441 gtcgagggta ctctcggtct caccggctcc atcgtcgagt acgacggctt tctcgcttcg
     4501 ggggccgccg ttttcactcc tgcgctgcgg ttcgattctc ctcgtctggt gatcgccggt
     4561 cagggaagct ggaccctgtt cgagagcggt aacgggattc tccagggtgc cgcggccgcc
     4621 gcctggctgg ccggctctcg gggctcctgg cgcctcgagc tgtccggctc ggccggtggc
     4681 tccgagtacg ccgccgagcc gggcgtcggg cacgtgctcg ccggtgggcg actgcacctc
     4741 ttcgggacca gcgccggagg ctggatcggg gcccacgcgg ggaagtcatt cggcggaccg
     4801 tccggggtgc cggtggagct ggtggtggcg ggctggtcca tgaagaaccg cctggcaatg
     4861 gtgggaacca tcacgacgac gcggcaaggc gaggctcggt acctggacct gctcggcgcg
     4921 gtccgctgga ccggcgtcaa agcggaactc gaagcccgcg gaggtgcccg ggtgagcgac
     4981 gggtccacgg gagtgtacgg cgagatctcg gccgccgtgc cgctcagtcc gtggctcgca
     5041 atatcgttag gcggcggcaa gtacccctcg gatccggtgc gccagatcct gggcgcccgg
     5101 tacgcgagcg ccggggtccg gctccgagcc ttcggaccgc cggcccggtc ggtgccggtc
     5161 cacacgaccg gcgtgttgcg gggtcggctg gtgccgacca gcgagagtgg tccaccgctg
     5221 gagatcggag gatcggcgga acggcgcatg ctcagggtcc gcgcgccggg cgccatctcg
     5281 gtcgagttga tgggcgactt caccgattgg gtcccggtac ggctcgggca agtgatgccg
     5341 ggcgtgtggg aaactcagct cccggttccg ccgggggttc accgcgtcaa cgtgaggctc
     5401 gatggaggcc cctggtcagt tcccggggga gctcggctgg aacgaaccga gttcggcggt
     5461 accgtcggaa tagtggtggt tccgtgaccc cccgttccac tcctcgccag tcgctgcctc
     5521 ggcaaccacc cgaaccagga tccgccctgc ctggccgcac cactcccgga accagccggt
     5581 gtccacctga gccggcaggt ggctcagcgc atcgagatcg aagatcgggt ggctgatgcc
     5641 tacccgcgac aattccccat ccagggcgtt cagcatctgc tcgaggtgat cctcgaccgg
     5701 caccatgagc accggcttgc cgagcaccgc cgcctcgctc accgactcga acccggcggt
     5761 gcacatcacc gcgcggcagc cggccatgag gcggaggaac ttctcgccgt cgagttggtg
     5821 aaaagtgaga ttgggccccg ccgcttcgac cgccggggcc cctggccacc gcggacttgg
     5881 tccgggcctt caggtacgcg gcgaccgacc tgtggccgag ccccaggcgg cgccgcaccc
     5941 ggctgaagtg gtgattgagc tcgaggacca ggtcgtagaa ccgggcgccc agccgctcga
     6001 gcagccggtt ccccgcggtg agcccgtcga actggtggcc gtgaatgacg aggaaccggc
     6061 ggccgtcggc ttcgtaccgg attgttgaat acacgtcacg ccgtgtgaca accgtgtggt
     6121 gcgaacgtga cgcgggcccg gtccgtgact tccggccgcc taacgacccg tttcgaccgc
     6181 ctcaacctgg ggccgctcca tctcgctgga gagttgcagc agatagatcg cgaaggctgc
     6241 cagctgccag ccgaaccggg acgaactgcc caccagcgcg cccagcagac tccggctcaa
     6301 gacaaaccgg ctgccggcca gccggactgc gggacgggcc agcgagcttc gcaggaggta
     6361 ggcggccgtt tcccgggcga atcggcggaa ttgctccgcc cccaggttgg gattcacttc
     6421 cttctgttcg tacctgaggt cgcggtacct ggggtaggcg cggcggatgg tctccgaatg
     6481 aaaatcaagg tccaggaaca acgaagccgg gagcgagacc aggaagtcgt acaggtcatg
     6541 atcgaggtag gggctcagga cctcgacgct ccggttgagg atccgatacg gcgcgagagc
     6601 aatctcgcgc cgggtgcggt tccagaagta gaacgccccg accggattcg gcgcctcggc
     6661 gtggcgcgcc agctcgcccg ccagccgggc cacggcgggg tcgcggccca gccggccttg
     6721 ccaacccggg gcgaccaggc ggatgcggct ctccgaggta gcgagcaggc tgatggcaag
     6781 ctcctcgaac cgcccggcgt cgaacagggc cagccgctcg accgtgagga acagaccggc
     6841 ggacaggaca tcacctccga tgccgtcgta gatgtgccgg acccgacctc gcaggtactc
     6901 gcccagcgcg aggtaccagg cgtgctcatc ggagcagaag ttggtgagac ggttcttttg
     6961 cagctcggct tcgatccggg acctgccttg ggcaaccacc acatggggca cgtcgaccga
     7021 gcgcgcaatc tcggcggcga cggcgccttc gtcggggtag ggtgggtcgg gctgcagcgt
     7081 gaggcagagc ttcgggcgtc ggccggcccg gcagagctcg agcagaatgt ggcgcgcgtc
     7141 gcggccaccg ctcaacggaa cgcccacgtc ctcatcgggc cgcacccgcc ggtccatggc
     7201 gatccggaac agctcgatgt aaccctcgat cgccggatcg cggcccagcg gttgggcccg
     7261 ggataccggg aacccgcccg agagatgtaa tcgcccgtca caccactcgg ccttcgcatc
     7321 aggggggaga gcgcgaatgg cgcggaatgc cgtgtcctcg cccaggaaga a
//
LOCUS       DASWKS010000023         7462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1488254, whole genome shotgun sequence.
ACCESSION   DASWKS010000023 DASWKS010000000
VERSION     DASWKS010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7462
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488254"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VGA78_00880"
     CDS             complement(<1..220)
                     /locus_tag="VGA78_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892437.1"
                     /translation="MFENLIESKQKRFTSLKQTLISLVFHGVIIFAAVKATTGAAETL
                     REILQDTTMVFLKPPEPPPPPPPEAPPPD"
     gene            complement(320..1786)
                     /locus_tag="VGA78_00885"
     CDS             complement(320..1786)
                     /locus_tag="VGA78_00885"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9892438.1"
                     /translation="MRTLRRRLTIWYTAALLATLFAFGFTLYVDRRISTARELDERLA
                     LEASLSGYWLATSQRVLERLVTPDESGQFKLDPGIAAYFEAFRDYLIVADPQGRPLFI
                     SETARPLPYASIERMIEPLYPPPLQRQYGTYTPDQRIGALRYVVQPVSGAAGQVGGIL
                     VAATFGSVVYGPSALLRSMMVALPVVVAASLLLGYGLAQSVKPMETMVLELEAISDGR
                     SLHRRLPVPRTDDEVARLALAVNRMFARLEQSFVALHRFIADASHELKTPLMVLRAGV
                     ERALTNPRNPPDNLEALDNALAEVNRMTEMVENLLTLARADEGRAPLSVEPCDLRELV
                     NEAVETAGMLAESEAIQVTTRIPDHSVPLNVDRNRIRQLLLNLVTNAVKYTPAGGSIG
                     VELDDRGQDVMLQVKDTGIGIAPGDLPSIFDRFWRGDPSRSRVGAQPGTGLGLAITKW
                     IAEAHGGTIAVQSRPGRGTTFTVVLPRFAEPPEGVPII"
     gene            complement(1783..2454)
                     /locus_tag="VGA78_00890"
     CDS             complement(1783..2454)
                     /locus_tag="VGA78_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9892439.1"
                     /translation="MRILIVEDDKTVGQYVQHGLEEQGYHADLVDDGLEGLRQISGGR
                     FDLAVLDLRLPSMNGVELVRTLRDRGVGIPILVLTAQDALESKVQALRAGADDYVTKP
                     FAFEELLARVEALSRRPRQVTTPVLRVGDLEVDTQTREVRRAGKQIELTPKEYAVLEY
                     LMRHEGRVMSRTLITEYAWDYHFDPGTNIVDVVINRLRKKLDQSSGPRLLHTVRGVGY
                     VVKAG"
     gene            complement(2451..3953)
                     /locus_tag="VGA78_00895"
     CDS             complement(2451..3953)
                     /locus_tag="VGA78_00895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9892440.1"
                     /translation="MPDSFALVRDVARALNRDQAPEEVFRSVVTLLLTHLPLRRATLW
                     RRAPSGTQVVAVTAPPDAPVEQWGERVAPGVLRLPLTHAGHRLGALELEPAQPGALPD
                     PETLSVVAEVLAPFLDAVLLSEDLASEVATRSRELHEQRRLISLIIDSLPVGLYVIDR
                     DYRIVVWNRKRETGTQGMRRDQVVGRKVFEVLTRQSADQLKSEYDTIFETGELLQRDQ
                     VVEVAGERRTFRQSKIPMRLDGEAISHVITIGEDVTERDLAEQRILQSEKLAAVGQLA
                     AGVMHEINNPLATIGACAAAIEARLGDAADSTVQEYLGIIEREVHRCTRIVDQLLDFS
                     RPRAETAVSRLEPSPLNNLVNDTLHLLKHHQRFKQLSLQKDLAPGLPLTMVDAERMVQ
                     ALMAILLNAADAMERGGNLVIRTARNNARDDELVVEIIDSGVGIPPEALGKIFEPFYT
                     TKPPGRGTGLGLTICYGIVEEHGGRIVVESEPGVGTTFRLFLPAAPDSPP"
     gene            4181..5605
                     /locus_tag="VGA78_00900"
     CDS             4181..5605
                     /locus_tag="VGA78_00900"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX9892441.1"
                     /translation="MALLPWIDNAPRRARGREVQPVTRPWDGRAIARIELATGEDLDR
                     AIEGAERAFGVMRAMPAHRRREILLATAALLRRERVPLGRLMAQDAGKPVTLALAEVD
                     RAIATFTIAGEELRHGSGELHPADIDPRGEGFVAVSQRFPVGPIAAISPFNFPLNLVA
                     HKVAPAIAVGSALVLKTPPQAPLVPFRLAALLAEAGLPPGGFQVLHLPIAVAERLATD
                     PGFAMLSFTGSDRVGWHLKSVAGRKKVLLELGGNAATIVHEDAVDLPALAARVAFGAF
                     AYAGQICIKVQRLLLHRPIAARFIRHLVAATRGLKAGDPLDPATIVGPMIDDEAVLRV
                     QGWIDEAIEGGARPLLRGRRRRRILGPTILAEVGPGMKVLSREVFGPVLTLQTYRTWD
                     QALRLANDSVYGLQAGIFTRDAGRVRAAFRELEVGGVIANDIPTLRLDHLPYGGVKAS
                     GFGREGLRESMREMTESKLLLWRP"
     gene            complement(5615..6073)
                     /locus_tag="VGA78_00905"
     CDS             complement(5615..6073)
                     /locus_tag="VGA78_00905"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX9892442.1"
                     /translation="MALPAAGTPAPDFTLPSTSGQSVTLSELRGKKVLLAFFPLAFTG
                     TCTAEMCAFSDDYGRFQDEQTVVLPISVDSVPTLKEFKAKERLAVDLLSDFKRDVSRR
                     YGNLNEDKFFSNRAYVLIDREGTVRWTHTEDSNSNRRENAELLQQLKAVT"
     gene            complement(6105..6713)
                     /locus_tag="VGA78_00910"
     CDS             complement(6105..6713)
                     /locus_tag="VGA78_00910"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEX9892443.1"
                     /translation="MPFTLPPLPYDYTALEPHIDEQTMRIHHDKHHGTYVTNLNAALE
                     NQAGLQAKSIEALLRDLSAVPEDKRTAVRNNGGGHYNHTLFWEIMAPGGARTPQGKLS
                     DAINSSFGGFDSFKEQFAKAGMGRFGSGWAWLVRKGDGLAIESTPNQDNPLMEGRSPV
                     MGCDVWEHAYYLKYQNRRADYLAAWWNVVNWTVVGERYQSGR"
     gene            complement(6754..>7462)
                     /locus_tag="VGA78_00915"
     CDS             complement(6754..>7462)
                     /locus_tag="VGA78_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892444.1"
                     /translation="ALLSPHLPVALGLVFLAGALELLLPRRPRLLRCWLGAALVFLGA
                     AAVLTATIIGPLPATYVALREGPIGDPAARLLVLLLALPVLVYLAWWSLIPAGGLLLG
                     RIAGSVLPAGVLLWQGIGMPLTLLVAGWCAVRRRPLLLGASLGGFGLWSGNPQGWMGG
                     GLLLAATMLWPLLPATGQRVGPFLQRGIAGIAGAGLVLTIAGGLQVQVGYTVLLAVIS
                     AGRLVLHRGVRAAVASR"
BASE COUNT         1237 a         2521 c         2477 g         1227 t
ORIGIN      
        1 cgtccggtgg cggcgcctcg ggtggtggcg gcggtggtgg ctccgggggc ttcaggaaca
       61 ccatcgtggt gtcctgcagg atttcccgaa gggtctccgc agcgcccgtc gtggccttca
      121 cggcggcgaa gatgatcacg ccgtggaaca ccagcgaaat cagggtctgc ttcagcgacg
      181 tgaagcgctt ctgcttcgac tcgatcaggt tctcgaacat gactctccct tcctgcgcgt
      241 caggaacgct cgaccactaa tcaaccgcgc gactctgaca ggaggatgtc ggccggatta
      301 caaattgatt acagaggcgt tagatgatgg gaacaccctc gggcggctcg gcaaaccgtg
      361 gtagcacaac ggtaaaagtg gtcccgcggc cggggcggct ttgcaccgcg atggtcccac
      421 catgagcctc ggcgatccat ttcgtaatcg ccagtcccag cccggtcccg ggctgggccc
      481 ccacccggga ccgggaggga tcgccccgcc agaaccggtc gaagatgctg ggcaggtccc
      541 cgggggcgat cccgatcccg gtgtccttca cctgcagcat cacatcctga ccccggtcgt
      601 ccagctcgac cccgatgctg ccacccgcgg gcgtgtactt caccgcgttg gtcaccaggt
      661 tcagcagtaa ttgccgaatc cggttgcgat ccacattcaa gggcaccgag tggtctggaa
      721 tccgggtagt gacctgaatg gcctccgact cggctaacat gccggcggtc tcgaccgcct
      781 cgttcaccaa ctctctcaga tcacagggct ccacggacag gggcgcgcga ccctcatcgg
      841 cgcgggccag ggtcagcagg ttttccacca tttcggtcat gcggttgacc tcggccagcg
      901 cgttgtcgag ggcttcgagg ttgtcgggtg gattccgggg attggtgagg gcgcgttcca
      961 ctccggcacg cagcaccatg agcggggtct tgagctcgtg gctggcatcg gcaatgaagc
     1021 gatgcaacgc cacaaagctc tgctccagcc gggcgaacat acggttcacc gccagggcga
     1081 gacgcgcgac ttcatcgtcg gtacgaggca cgggcagccg gcggtgcagg ctgcgcccgt
     1141 cgctgatcgc ctccagttcg agcaccatgg tttccattgg cttgaccgac tgggccagtc
     1201 cgtaccccag gagcagcgac gccgccacca ccaccggcag ggccaccatc atggaacgca
     1261 gcagcgccga ggggccgtac accaccgagc cgaacgtggc cgccaccagg atgccgccca
     1321 cttgcccggc cgcgcccgac accggttgga ctacgtatcg cagcgcgcca atcctctggt
     1381 cgggcgtgta ggtaccgtat tgtcgctgca ggggcggcgg gtagagcggc tcgatcatcc
     1441 gctcgatgga ggcatacggc agcgggcgtg cggtttcgga aataaagagg ggccgcccct
     1501 ggggatcggc cacgatcagg tagtcccgga aggcctcgaa gtacgcggcg atcccggggt
     1561 cgagcttgaa ctggccgctc tcatccgggg tgaccagccg ctcgagcacc cgctgggacg
     1621 tggccagcca gtatcccgag agactcgcct ccagcgccag ccgctcgtcc agctcgcggg
     1681 cggtggaaat gcggcggtcg acgtagaggg tgaagccgaa ggcgaacagc gtggcgagca
     1741 gcgccgccgt gtaccagatg gtgaggcgcc ggcggagagt tctcatcccg ccttgacgac
     1801 atagccgaca ccgcgaaccg tatgcagcag cctgggtccc gagctttgat ccagcttctt
     1861 tcgcaaccgg ttgatcacca catccacgat gttggtgccg ggatcgaaat ggtagtccca
     1921 ggcatactcg gtgatcaggg tccgcgacat cacccggccc tcgtgccgca tcagatactc
     1981 cagcaccgcg tattccttgg gcgtcagctc gatctgcttc ccagcccgcc gaacctcgcg
     2041 ggtctgggta tcgacttcga gatcccccac ccgcagcacc ggcgtcgtca cctggcgggg
     2101 ccgccgactc agggcctcga cccgggccag cagttcttcg aaggcgaagg gcttggtgac
     2161 gtaatcgtcc gcccccgcgc gcagcgcttg caccttggac tccagcgcgt cctgggcggt
     2221 gagcaccaga atcgggatgc ccaccccccg gtcccgcagg gtacgcacca gctcaacccc
     2281 gttcatgctg ggcaagcgca ggtcgagcac cgccaggtcg aacctgccgc ccgagatctg
     2341 ccgcagccct tccagcccat catcgaccag gtcggcatga tagccctgct cctccagacc
     2401 gtgctggacg tactgaccca cggtcttgtc gtcctccacg atgaggatcc tcacggaggg
     2461 ctgtccggcg cggccggcag gaacagccgg aatgtcgtcc cgacgcccgg ctcgctctcg
     2521 accacgatgc ggccgccgtg ttcttccacg atgccgtagc agatcgtgag gccgaggccg
     2581 gtaccgcggc cgggcggctt ggtggtatag aagggctcga agatcttgcc cagcgcctcg
     2641 ggcgggatgc ccacaccgct gtcgatgatc tcgaccacca gctcgtcgtc ccgggcgttg
     2701 ttccgggcgg tgcggatcac caggttgccg cctcgttcca tggcgtcggc cgcgttcagc
     2761 aggatggcca tgagcgcctg caccatccgc tcggcgtcca ccatcgtgag gggcagaccc
     2821 ggagcgaggt ccttctggag cgacagctgc ttgaaccgtt gatggtgctt gaggagatgc
     2881 agggtatcgt tgaccaggtt gttcagcggg ctcggctcga gccgcgacac ggcggtttcc
     2941 gcccggggcc ggctgaagtc gagcagctgg tccacgatcc gggtacagcg gtgaacctcg
     3001 cgttcgatga tccccaggta ctcttgaacg gtgctgtcgg cggcgtcgcc cagccgggcc
     3061 tcgatggccg ccgcgcaggc cccgatggtg gcaaggggat tgttgatctc gtgcatgacg
     3121 ccggcggcca gctggccgac agcggccagc ttttcactct ggagaatccg ttgctcggcc
     3181 aggtcacgtt cggtcacgtc ttcaccgatg gtgatgacgt gactgatggc ttcaccatcc
     3241 agccgcatgg ggatcttgct ctggcggaag gtccgccgct cgcccgccac ttccaccacc
     3301 tggtcccgct gcagcagctc gccggtttcg aagatggtgt cgtattcgga cttgagctgg
     3361 tccgccgact gccgggtcag gacctcgaag accttccgcc ccaccacctg gtcgcgccgc
     3421 atgccctggg tgccggtctc ccgcttgcga ttccagacca cgatccggta gtcgcgatcg
     3481 atcacgtaca ggcccaccgg caaactgtcg atgatgaggc tgataagccg ccgctgctcg
     3541 tgcagctccc gggaccgggt ggcgacttca ctggccagat cttccgagag cagcacggcg
     3601 tcgaggaacg gagccagcac ctcggcaacc accgacaagg tttccggatc gggcaaggca
     3661 cccggttgag ccggctccaa ctcgagcgcg ccgagccggt ggccggcgtg ggtgagcggc
     3721 agccgcagga cccccggggc gactcgttcg ccccactgtt cgaccggggc atcgggcggc
     3781 gcggtaaccg ccaccacctg ggttccactg ggcgcgcgcc gccagagcgt ggcccggcgg
     3841 agcggaaggt gggtcaggag cagggtcacg accgagcgga agacctcttc gggcgcctgg
     3901 tctcggttga gggcacgggc gacgtcacgg accagggcaa atgagtcggg cacgatggta
     3961 aggtatccgg cggggccgga acttctaggt ttctcttcca ggttcctggt tccgggttcc
     4021 aggttccagg tgcggtgctg ggtacggtgc cggagtaccc catgccaggt gctgccccgg
     4081 cttgagattt aagtttggat gctatcgccg ccgcgcatcc agtacgagtg cacccggcac
     4141 cgcatcgacg gaacttggaa cccggaaccc ggaacgtctt atggccctcc tcccctggat
     4201 cgacaacgcc ccgcgccggg cccgcggccg cgaagtgcag cccgtcaccc gcccctggga
     4261 tggtcgagcc atcgcccgga tcgagctggc caccggcgag gacctcgacc gcgcgatcga
     4321 gggagcggag cgggccttcg gcgtgatgcg agcgatgccg gcgcaccgcc gccgcgagat
     4381 tctcctcgcc acggcggcgc tgctgcggcg ggaacgggtc ccgctgggtc gcttgatggc
     4441 ccaggatgcg ggtaagcccg tcaccctggc gctggcggag gtcgaccggg ctatcgccac
     4501 cttcaccatc gcgggcgaag agctgcggca cgggagtggc gagctccacc ccgcggacat
     4561 cgacccccgg ggcgaagggt tcgtcgcggt ctcgcagcga ttcccggtcg ggccgatcgc
     4621 ggccatctcg cccttcaact ttcccctcaa tctggtggcg cacaaagtcg cccccgccat
     4681 cgcggtggga tcggccctgg tcctcaagac gcctccccag gcgcctctgg tcccgttccg
     4741 gctggcggcg ctgctggccg aggccggcct gcccccgggc gggttccagg tgctgcacct
     4801 gccgattgcc gtcgcggaac ggctcgcgac cgatcccggg ttcgccatgt tgagcttcac
     4861 cggcagcgac cgggtcggtt ggcacctcaa gtccgtggcg gggagaaaga aggtgctgct
     4921 ggagctggga ggaaacgccg ccaccattgt gcacgaggac gccgtcgacc tgccggccct
     4981 ggcggcacgg gtggcgttcg gtgccttcgc ctacgctggt cagatctgca tcaaggtgca
     5041 gcggctgctg ctgcaccggc ccatcgccgc ccgattcatc cgccacctgg tcgcggccac
     5101 gcggggactc aaggccggcg acccgctcga cccggcgacg atcgtcggtc ccatgatcga
     5161 cgacgaagcg gttctgcggg tacagggctg gatcgatgag gcgatcgaag gtggcgcccg
     5221 gccgctgctg cgaggccgcc ggcggcggcg gatcctcggc cccaccatcc tggcggaggt
     5281 cggccccggg atgaaagtac tgtcgcgcga agtcttcgga ccggtactga ccctgcagac
     5341 ctaccgtacc tgggaccagg cgctccgatt ggccaacgat tcggtctacg gactgcaggc
     5401 cgggatcttc acccgggacg cggggcgggt ccgggccgcc ttccgcgagc tggaggtggg
     5461 tggcgtcatc gcgaacgaca tcccgacgct ccgattggat cacctgccct atgggggcgt
     5521 caaggcatcc ggattcggcc gagaaggatt gcgcgagtcg atgcgggaaa tgacggaatc
     5581 caaactgctg ttgtggcggc cctgaccgat tcggttatgt caccgccttc aattgctgga
     5641 gcagctcggc gttctcgcgc cggttgctgt tgctgtcctc ggtgtgggtc cagcgcaccg
     5701 tgccctcccg gtcgatcagc acgtaggccc ggttgctgaa gaacttgtcc tcgttgaggt
     5761 tgccatagcg acggctcacg tcgcgcttaa agtcgctcag caggtcgacc gcgagccgct
     5821 ctttggcttt gaactccttc aaggtgggaa ccgaatccac gctgatcggg agtacgacgg
     5881 tttgctcgtc ctgaaaccgt ccgtagtcgt cgctgaaagc gcacatctcg gcggtgcagg
     5941 tcccggtgaa cgccagcggg aaaaaggcca gcaacacctt cttcccgcgc aattcggaga
     6001 gcgtcaccga ctgtcccgag gtcgacggaa gggtaaagtc tggcgcgggg gtgccggcgg
     6061 ccggaagagc catgtcatgt cccaggctga agtcccgcgc gtcgtcagcg gccgctttgg
     6121 taccgctcgc ccaccacggt ccagttcacc acgttccacc acgcggccag ataatccgcc
     6181 cggcggttct ggtacttgag gtagtaggcg tgctcccaca cgtcgcagcc catgacggga
     6241 gaacgcccct ccatcagcgg attgtcctgg ttgggggtgc tttcgatggc gagcccgtcg
     6301 cccttgcgga ccagccaggc ccagccactt ccgaatcggc ccattcccgc cttggcgaac
     6361 tgctccttga agctgtcgaa cccaccgaaa ctgctgttga tcgcatcgga cagcttgccc
     6421 tgaggcgtcc tggcgccacc cggagccatg atctcccaga acagcgtgtg gttgtagtgt
     6481 ccaccgccgt tgtttcgcac cgcggtgcgc ttgtcctcgg gcacggccga gagatcgcgc
     6541 agcagcgctt cgatgctctt ggcctgaagc ccggcctgat tctccagggc ggcattcagg
     6601 ttggtgacgt acgtcccatg atgcttgtcg tggtggattc gcatggtctg ctcgtcgata
     6661 tgcggctcga gcgccgtgta gtcgtagggc agagggggaa gcgtgaatgg catgtggtcc
     6721 tcctgacagg gcggcgggaa tatgagcgcg ccatcagcga gaggcaacgg cagccctcac
     6781 gccccggtga aggacgagcc ggcccgccga gatcaccgcg agcaacacgg tgtagcccac
     6841 ctgcacctgt aacccgcccg cgatcgtcaa caccaggccg gccccggcga tccccgcgat
     6901 gccgcgttgc aggaatgggc cgacgcgctg gccggtggcc ggcaacaggg gccacagcat
     6961 cgtcgctgcc agcagtaacc cgccacccat ccatccctga gggttgccgc tccagagtcc
     7021 gaacccgccg agcgatgcac cgagcagaag cggccggcgg cgcacagcac accaaccggc
     7081 caccagcagc gtgagcggca tgccgatgcc ctgccacagc agcacgccgg ccggcaacac
     7141 cgagccggca atccggccga gcaacagccc cccggccggg atcagggacc accaggcgag
     7201 ataaaccaga accggcagcg ccaggaggag caccagcagc cgcgcggccg ggtcgccgat
     7261 cggtccttcc cgcaacgcaa cataggtggc cggcaacgga ccgatgatcg tggccgtgag
     7321 gaccgctgct gcccccagga ataccagcgc agcaccgagc cagcaccgaa gcaggcgggg
     7381 ccgccgaggc aacagcagct cgagcgcacc cgccaggaag accagcccga gcgcgaccgg
     7441 aagatggggc gagagcagcg cg
//
LOCUS       DASWKS010000024         2305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_10386, whole genome shotgun sequence.
ACCESSION   DASWKS010000024 DASWKS010000000
VERSION     DASWKS010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10386"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VGA78_00920"
     CDS             <1..267
                     /locus_tag="VGA78_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892445.1"
                     /translation="GHVGDSGLRINGGYFVFRRTIFEYIKDGEDLVDAPFHRLIAENK
                     LLAFPYDGFWASMDTFKERQLLEDLYGIGKAPWMVWDRREPESR"
     gene            267..923
                     /locus_tag="VGA78_00925"
     CDS             267..923
                     /locus_tag="VGA78_00925"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HEX9892446.1"
                     /translation="MLGLRLAPPEGRPLRLLCLGAHSDDLEIGCSGTVQQLLRSWPQA
                     HCTWVVWSGAGARREEAEQAARQILPGPGQSTVVLEQFKDGFFPDQWADIKGRFETLK
                     ATAAPDLIFTHQRNDRHQDHRVIAELTWNTWRDHAILEYEIPKYEGDLSTPTLYVPLA
                     PEVVDRKVEVLLSVFQTQQSRRWFDAETFRGLMRLRGVECGSPTGYAEGFHASKLVLT
                     "
     gene            complement(916..>2305)
                     /locus_tag="VGA78_00930"
     CDS             complement(916..>2305)
                     /locus_tag="VGA78_00930"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9892447.1"
                     /translation="TGAPETGRRFALQSLDQRAMAGPVAKAVIRLGGGMAMADDVARA
                     HALALAEEPGPVVLELGGGEAGEGRGEGRGQVPSPPSRLPALHELVTLVKAARRPVIY
                     AGQGCAGGAASLRRLAEQLGAPVATTLSGRGVIPEDHPLALAIDLSPAGVDALNRLLA
                     TADLILVLGCKLSHNGSAGFRLVLPPDRLVHVDASAEVLGANYPARLTLQADVPGLLV
                     QLAAEPWTSGAWRADEIDACRRAARPDDRAEPRIHGVEPPTPEVFFAALRAELPPEAI
                     LTLDSGQHQMLARRHYRVLSPRGMIAPSDFQSMGFGLPAAIGAALAAPERPVVALIGD
                     GGFAMSGLELLTAVRNRLPVITIVFRDGMLGLIREQQMREFGHAHGVDLPPVDLAAFA
                     AAVGIRYVGMDGDLRTELQTALSAREPALVDVRVGDSPAMRRQHATGFARASVRRALG
                     PRLIGVLKRWLR"
BASE COUNT          396 a          777 c          796 g          336 t
ORIGIN      
        1 gggcacgtgg gcgacagcgg actgcggatc aacggcggct atttcgtctt ccgccggacc
       61 attttcgagt acatcaagga cggagaagac ctggtggacg cgcccttcca ccggctgatc
      121 gccgagaaca agctgctcgc cttcccgtac gacgggttct gggcctccat ggacacgttc
      181 aaggaacgac agctgctgga ggacctctac ggcattggga aggcgccctg gatggtctgg
      241 gaccggcggg agccggagtc gcgctgatgc tggggctccg cctggctcct cccgagggac
      301 ggccgctgcg cctgttatgc ctcggagcgc actccgacga tctggagatc ggatgcagcg
      361 ggacggtgca gcagctcctg cgctcctggc cccaggctca ctgcacctgg gtggtatgga
      421 gtggtgccgg cgctcggcgc gaggaggcgg agcaggccgc tcggcagatc ctgcctggtc
      481 cgggacaatc gaccgtcgtg ctggagcagt tcaaggatgg ctttttcccg gatcagtggg
      541 ccgacatcaa agggcggttc gagacgctca aggccaccgc ggcgccggat ctgatcttca
      601 cccaccagcg aaacgaccgg caccaggatc accgggtcat cgccgagctg acctggaata
      661 cctggcggga tcacgccatc ctcgagtatg agattcccaa gtacgagggc gacctcagca
      721 ctccgacgtt atacgtgccg ctggcgccgg aggtggtgga ccgcaaggtg gaggtcctcc
      781 tgtcggtgtt tcagacccag cagagccgcc gctggttcga tgccgaaacc ttccgcgggc
      841 tgatgcggct gcggggcgtg gaatgcggct caccgaccgg gtatgccgag ggctttcacg
      901 cctccaagct ggtgcttacc tgagccaacg cttgaggaca ccgatcagcc ggggccccag
      961 ggcgcggcgg accgaggccc gggcgaaccc ggtggcatgc tggcgccgca tggcgggcga
     1021 atctccaacc ctcacgtcga ccagagcagg ctcgcgggcg gagagggccg tttggagctc
     1081 ggtcctcaag tcgccgtcca ttccgacata acggattcct accgccgcgg caaaggccgc
     1141 cagatcgacc ggcggcaggt ccacgccgtg agcgtggccg aactcgcgca tctgctgttc
     1201 ccggatcagg cccagcattc cgtcccggaa gacgatcgtg atcaccggca gccgattgcg
     1261 gaccgcggtg agcaactcca gtcccgacat cgcgaaaccg ccatcgccga tcagcgccac
     1321 caccggccgc tccggcgcgg ccagggccgc tccgatcgcg gccggaagtc cgaagcccat
     1381 ggattggaag tcgctcggag cgatcatccc gcgaggggag agcacccggt agtggcgccg
     1441 cgccagcatc tgatgttgac cggagtcgag ggtgagtatc gcctcgggcg ggagctcggc
     1501 ccgcaaagcg gcgaaaaaaa cctccggggt cggcggctcg accccgtgga tcctgggctc
     1561 ggcccgatca tcgggtcggg cggctcggcg gcaggcgtcg atctcatccg cccgccacgc
     1621 tccggaggtc cacggctccg ccgcaagctg aaccagcaac cccggcacgt cagcctgcag
     1681 ggtcagtcgt gccggatagt tcgcacccag aacctcagca gaggcgtcga catggaccag
     1741 gcggtccggg ggaaggacca accggaatcc agcgctgccg ttgtgggaga gcttgcagcc
     1801 cagcacgaga atgaggtcag cggtggcgag caagcgattg agcgcgtcga ctcccgcggg
     1861 actgagatcg atggcgagcg ccaacggatg atcctcgggg atgacgccgc ggccggacag
     1921 cgtcgtggcg acgggggcgc ccaactgttc cgccaagcgg cggagcgaag cggcaccgcc
     1981 cgcgcatccc tggccggcat agatgaccgg cctgcgcgcc gccttcacga gcgtgacgag
     2041 ttcgtggaga gcggggagac gggagggggg agacgggacc tggcctctcc cctcccctct
     2101 cccctctccc gcctctccac cacccagctc caagacaacc gggccgggct cctcggccag
     2161 agccagggca tgagcgcggg cgacatcgtc ggccattgcc attccgccgc cgagccggat
     2221 cacggccttg gccaccgggc ccgccatggc ccgttgatcc aaagactgca gcgcgaaccg
     2281 gcgtcccgtc tcgggcgcgc cggtg
//
LOCUS       DASWKS010000025         4645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3336796, whole genome shotgun sequence.
ACCESSION   DASWKS010000025 DASWKS010000000
VERSION     DASWKS010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3336796"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VGA78_00935"
     CDS             complement(<1..603)
                     /locus_tag="VGA78_00935"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HEX9892448.1"
                     /translation="MPLAPLGWLGSILLFGIPSLVFTFFLFVVLPAVAARGASPFVTF
                     HAGFVLPLLLMLIAALVGYRLEGRPWSWAGIRDRFRLQRPDRTTWLWTAGLVALLILL
                     LPILPFTAAIQNAFAGIHFYDQPAGYTAFMTGLTDGETQILGRPFTWGLLFYFLAGLF
                     VFNILGEELWWRGFILPRQELAFGPRAWIIHGVLWTLFHAF"
     gene            759..1850
                     /locus_tag="VGA78_00940"
     CDS             759..1850
                     /locus_tag="VGA78_00940"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9892449.1"
                     /translation="MRSIDIFRWSLVVWLAGNAAGSSAQTNTGEDETARLLARLDSLR
                     QVSHIPGLAVVVLRDTTILAAQGMGYADLERKVPVTPETPFNIASVAKPISAVVALRL
                     VERGVLDLDRPMRSYEGFAEFCADVRQAGGIFFTDLSCDGEALTLRHVLAMTANGPPG
                     TRFFYNPPVYSWASRPMAQVAGAPFSDLTAKLVFEPAGMTRSARIHRRLPLRPDLAAD
                     LARPYHIDSSGRTVESPPPGPQGDGAAGGVVSTALDLARFDIALTQGRLVSAESQKLM
                     WTAGRSPAGQVLPYGLGWFVAQLGGEPVVWHTGLWDGAYSALYLKAPRRGLTLVLLAN
                     SDGLRWEGWLDEAAIERSPFAVAFLELVR"
     gene            complement(1860..2462)
                     /locus_tag="VGA78_00945"
     CDS             complement(1860..2462)
                     /locus_tag="VGA78_00945"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HEX9892450.1"
                     /translation="MTALPDPVEWQAFRQQLLGYVGRRVNHPADAEDLVQDILARAAG
                     RLSSLRSGERLVPWLHAISRHALVDFYRAKGRTPELVELEPGTHELDGQPEEGATGRA
                     ALVSCVRPMLAVLPEIYREAVLRVDLNEERQVDVARDLGLGISALKSRVQRGRVLLRD
                     AFTDCCALERDATGRVVDFHPKGRTCLIEECARVRLRRGP"
     gene            complement(2783..>4645)
                     /locus_tag="VGA78_00950"
     CDS             complement(2783..>4645)
                     /locus_tag="VGA78_00950"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9892451.1"
                     /translation="EVVGVLPPGRDDMGGVRATVWVPVKLPPPVRRGPFWMRGMARLK
                     EGVTVEMAAADLAQVSARILPIWSDFRDTLAKLTPIPLRERIVGRADRQVGLFAGAVL
                     LVLLLSITNVATLVLVRASAREPEVAVRVMLGAGKGRIARLLVTENILLTLAAGAVGV
                     VLASFGLKLAISELPNLPRIQYAALDWRAMSFAFAAALLSGILVSLSPVAALSDRRGT
                     LRADARRAGTGRHSNTMRGAMVTAEFALALPLLVGAGLLLNSFVRLSRVDPGFDPEGI
                     VSVSLALPSARYPGQPELQRFWQQAEQLMVEMPGAVAAGLASDIPPDNSGNNNNFNLV
                     DHPVPSGQSEPVSPWYAATAGYFHALGIPVLDGRLFTAADTVEPVVVVSHSWARRYFP
                     NESAVGRQLIEGGCYDCPRTTIIGVVGDVKNIGLAESEDAVYGPLDQARARSMNLVVR
                     STAGTAAALRALRENVHALDPELPLVESTIAERFDDSLADPRRWTVVLAAFAGVGVAL
                     AALGIFGLMSYVVRQRRREIGVRLALGAQPGTVTRLIIARGVRYAVVGSGVGLVVTLL
                     LVRRLETLLFGVSPTDVRTITGVAALLLAVALVACWLPGRRAGRISPVEAISTE"
BASE COUNT          817 a         1633 c         1533 g          662 t
ORIGIN      
        1 aaaggcgtga aacagggtcc agagcacccc gtggatgatc caggcgcgcg ggccgaatgc
       61 caactcctgc cggggcagga tgaagcctcg ccaccaaagc tcctcaccca ggatgttgaa
      121 gacgaaaagc cccgccagga agtagaagag cagcccccag gtgaagggcc ggcccagtat
      181 ctgggtctct ccgtcggtga gcccggtcat gaatgccgta tagccggccg gctggtcgta
      241 gaagtggatg ccggcgaacg cattctggat cgccgcagtg aacgggagga tcgggagcag
      301 caggatcagg agagccacca gcccggcggt ccagagccag gtggtgcgat cggggcgctg
      361 cagccggaac cggtcgcgga tcccggccca gctccagggc cgcccttcca gccgataccc
      421 caccagggcc gcgatcagca tgagcagcag cggcaggacg aagccggcgt gaaacgtgac
      481 aaacgggctg gcgccccgcg cggcgaccgc gggaaggacc acgaacagga agaaggtgaa
      541 aaccagcgag ggaataccga acaggagaat gctgccgagc cagccgagtg gcgcgagagg
      601 catgagtcct caagagggtg gatgagagat tctatccccc gagggcccgc cccgcgaacg
      661 ccgcccgatg taccaagcgg tggcttcggc gatctcacag ccgcggaggc gccccgatcc
      721 tcgctgatag gcggtcaggc taccttccct gcatgagcat gcgaagcatt gacatatttc
      781 gctggagcct ggtcgtctgg ctcgccggca acgcagccgg ttcgagcgcg cagactaaca
      841 ccggggagga cgagacggca cgcctgttgg ctcgcctcga ttctctgcgc caggtgtcac
      901 acattccggg actggccgtc gtcgtgctgc gcgatacgac catcctcgcc gcacagggca
      961 tgggctatgc cgacctcgag cggaaagtgc ccgtcacccc tgagacccca ttcaacatcg
     1021 cgtcggtggc caagccgatt tccgccgtcg tggccctgcg gctggttgag cgcggcgtcc
     1081 tggacctcga ccgccccatg cgcagctacg aggggttcgc cgaattctgc gccgacgtgc
     1141 gacaggccgg tgggatcttc ttcactgact tgagctgtga cggagaggcg ctgaccttgc
     1201 gacacgtgct ggcgatgacg gccaacggcc cgcccggcac tcgcttcttc tacaatccgc
     1261 cggtgtactc ctgggcatcc cgtcccatgg cccaggtcgc aggagccccg ttttccgatc
     1321 tgaccgcgaa gctggtcttc gaacccgcgg gcatgacccg ctcggctcgg atccatcgcc
     1381 ggctacccct gcggcccgac ctcgccgccg atctggcgcg tccctatcac atcgattcgt
     1441 cgggccggac ggtcgaatcg ccgcccccgg gccctcaggg cgacggcgcg gccggcggcg
     1501 tggtctctac cgcgctcgac ctggcgcgct tcgacatcgc cctcacgcaa ggcaggctgg
     1561 tgtcggccga gtcgcaaaag ctgatgtgga ccgcgggccg atcgcccgcc ggtcaggtct
     1621 tgccatatgg gctggggtgg ttcgtcgccc agctgggcgg ggaaccggtg gtgtggcaca
     1681 ccggactgtg ggacggagcc tactcggcgc tctatctcaa ggcgccgcgc cggggactta
     1741 ccctggtact gctggccaac agcgacgggc tgcgttggga gggctggctg gacgaagccg
     1801 ccatcgaacg ttcgcccttc gcggtggctt tcctggaact ggtgcggtga ttccggtatt
     1861 catggcccgc ggcggagcct aacccgggca cactcctcga tcagacacgt cctgcccttg
     1921 gggtggaagt ccaccacccg tcccgttgcg tcgcgctcca acgcgcaaca gtcggtgaat
     1981 gcgtcgcgca acaggacccg gccccgctgc acccggctct tgagcgccga aatgccgagc
     2041 cccaggtcgc gcgccacatc gacctgccgt tcctcattca ggtctacccg gagcaccgcc
     2101 tcgcgataaa tctccggcag tacggccagc atgggccgga cgcacgaaac cagggccgcg
     2161 cggccggtcg cgccctcttc cggctggccg tccagctcgt gggtgccggg ctcgagctcc
     2221 accaactccg gcgtccggcc cttcgcccga tagaaatcca ccagggcgtg gcgcgaaatt
     2281 gcatggagcc acgggacgag ccgttccccc gaccggagcg acgacaagcg ccccgccgcc
     2341 cgggccagga tgtcctgcac caggtcttcc gcgtcggccg gatggttgac ccggcggccg
     2401 acgtagccca gcagctgctg ccggaaggcc tgccattcca ccggatccgg cagggcggtc
     2461 atgtccggca tgatacggcg cggcccgccg gcgcgcgagc ccggcgggcg cgccaccgcc
     2521 tcaacaacag ccagtctcgt ccgaaccgta gcagccaccg gtacttccgg gacaacaggg
     2581 accaggcatg cttcctccag gcgtgagagc ttcgtgaggg ccgaatgccg gcgctcactt
     2641 ctgaagacga aggcacgctt gaaaggacgc aagcaccgtc ggtcggtcgg tcaggcggac
     2701 aggcggtcag acccctcccc gcctttccac cctgaccgcc tgacgactga ctgaccgact
     2761 gaccgactga ccgactgacg ccctattccg tgctgatcgc ctccaccgga ctgatccgcc
     2821 cggcccggcg gcctgggagc cagcaagcga cgagcgccac cgccagcagg agcgcggcca
     2881 ctccggtgat ggtacgcaca tcggtggggc tgacgccgaa caacagcgtc tccagccgcc
     2941 ggaccagcag cagggtcacc accaggccga caccactccc caccaccgca tagcgcaccc
     3001 ctcgggcgat gatgagtcgg gtcaccgtgc cgggttgcgc ccccagcgcc aggcgcactc
     3061 cgatctcccg gcggcgctgc cgcaccacgt aggacatcaa tccgaagatg cccagcgcgg
     3121 cgagcgccac ccccacgccg gcaaaggccg cgagcaccac ggtccagcga cgcggatcgg
     3181 ccagcgaatc gtcgaatcgc tccgcgatag tggactccac cagcgggagc tcgggatcca
     3241 gcgcgtgcac gttttcacgc agggcgcgga gggccgctgc ggtccccgct gtgctgcgca
     3301 ccaccaggtt catggacctg gcccgggcct ggtcgagggg cccgtagacc gcgtcctccg
     3361 attcggccag tccgatgttc ttcacgtcgc ctaccacgcc gatgatcgtg gtgcggggac
     3421 agtcgtagca gccgccctcg atcaattgcc ggccgaccgc cgattcgttc gggaaatagc
     3481 gcctggccca ggagtgactg accaccacca ccggttccac ggtatcggcc gccgtgaaca
     3541 gccgtccatc gaggaccggg ataccgagcg catggaagta gccggcggtt gcggcatacc
     3601 agggcgacac cggttcggat tgtcccgagg gcaccggatg gtcgaccagg ttgaagttgt
     3661 tgttgttccc tgaattgtcg ggagggatat ccgaagccag tcccgccgcc accgcgccgg
     3721 gcatttcgac catcagctgc tccgcctgtt gccagaaccg ctggagctct ggttggccgg
     3781 gatagcgggc cgaaggcaac gccaggctga ccgacacgat gccctccgga tcgaatcccg
     3841 ggtccactcg cgagagccgg acgaagctgt tgagtaggag cccggcgccc accagcagcg
     3901 gcaacgccag cgcaaattcg gcggttacca tagcaccgcg catagtgttg ctgtggcgcc
     3961 cggtgcccgc ccggcgggcg tcggcgcgaa gtgtcccgcg gcggtccgag agggccgcga
     4021 ccggggagag gctcaccaga atgccggaaa gcagcgccgc cgcgaaggcg aagctcatcg
     4081 cgcgccagtc gagtgcggcg tactgaatcc gcggcaggtt gggcagctcc gagatcgcga
     4141 gcttcaagcc gaacgatgcg agcaccaccc ccacggcacc ggcggccagg gtgaggagga
     4201 tgttctcggt gacgagcaga cgggcgatcc ggccctttcc cgcacctaac atcacccgca
     4261 ccgccacctc cggttcccgg gcggaggcgc ggaccaggac caacgtcgcg acgttggtga
     4321 tcgacagcag cagcaccagc agaaccgcac cggcaaagag cccgacctga cgatccgccc
     4381 ggccgacgat ccgctcgcgc agagggatgg gagtgagttt ggccagagtg tcccggaagt
     4441 cgctccagat gggaaggatc cgggcgctga cctgggccag atcggccgcc gccatctcga
     4501 ccgtgacgcc ctccttgagg cgggccatgc cccgcatcca gaagggtccc cgccgcaccg
     4561 gaggcggtag cttgaccggc acccagacgg tagcccggac tccgcccatg tcatcccggc
     4621 ccggcgggag caccccgacg acctc
//
LOCUS       DASWKS010000026         5315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1489019, whole genome shotgun sequence.
ACCESSION   DASWKS010000026 DASWKS010000000
VERSION     DASWKS010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5315
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489019"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VGA78_00955"
     CDS             complement(<1..209)
                     /locus_tag="VGA78_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892452.1"
                     /translation="MSHRSALLLMLVASACFQPARLARDDSATVLAKQILEAPDPTLL
                     GPLPVRTLYYGSGNDRRRRAFKDSVT"
     gene            complement(380..631)
                     /locus_tag="VGA78_00960"
     CDS             complement(380..631)
                     /locus_tag="VGA78_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX9892453.1"
                     /translation="MGLIITLVIGLIVGVIAKALMPGRDPGGIIITILLGIGGALVGT
                     WLGRLVGLYQPGASAGFIMSVVGAVVILWIYRMVKGRTA"
     gene            758..2224
                     /locus_tag="VGA78_00965"
     CDS             758..2224
                     /locus_tag="VGA78_00965"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9892454.1"
                     /translation="MSLSNRCVGLLVGAAAVGIPLSRSSAQAAPDSVRIARVVAGLRS
                     SVQVAGRRPRIWSLAERMSQYRAPGVSIAVISGGRVTWARGFGVKEAGGADAVTSETL
                     FQAASISKPVAATGTLRLVAQGRLALDTNVNRYLASWQVPENRFTASEKVTLRRLVSH
                     SAGLTVHGFPGYAQGMPVPSVVQVLNGEKPANTAAVRVDTTPGAIWRYAGGGTTVQQL
                     LLTDVTGEPFPELIRRLVLAPAGMTRSTYEQPLAEARWPEAARAHRGTGMVIPGRWHT
                     YPEMAAAGLWTTPTDLARWALAIAAARAGTDSTLLPPALAAEMLTPQKGSFGLGPSLS
                     GAGRAFRFGHGGANEGFRSNLLYFPEAGVGAAVMVNSDNGDALIQEIFYAIAAEFGWP
                     DYGPRQISAVPRDSAALAAAAGVYDMEFNRQRFPLTVRFEQGALSASLPPSPVAEELV
                     PVDSIAYASLSRGWRYEIRGDSLTVVIEDGPRISGKKR"
     gene            2251..4278
                     /locus_tag="VGA78_00970"
     CDS             2251..4278
                     /locus_tag="VGA78_00970"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9892455.1"
                     /translation="MRAFVVLGVGLLLTASLPDRLTAQGTPPLEDVVSLRQAGGVAVS
                     PDGRRVAYTIRTTDWKENRFDTEIWLAQGGAEPLQLTRSVKGSATTPRWSPDGKWMGF
                     LSDRGERRQLFLISALGGEAVQLTKAATSVTNFRWSPDGKVIAFTAAEAENDAMKQRK
                     DKYGEFAVEDADWVPNHLWLVDVDPAKGADGATPEARRLTEGRAFTVGGFQWSPDGSR
                     IAFDHQADPLITSGITADISVVTVATKAVTPLVRAPGGDNGPVWSPDGQWLLFGSSGG
                     DTTSNFYRNNRLMKIAAGGGAPTRLGADFDEQIGGVSWTAAGIYFAGFEKTRRNLYRL
                     DPASGAVQKVWDSPLTLFGVDLTPDGRTLAFTAQTPSTLSEVYLVPLPSPVSPAPTPS
                     KVTDLSSQISSWPVGSAEVVSWKSRDGATIEGVLHKPRDFSPSQKYPLLVVIHGGPTG
                     IDLPLPVTGGVYPITQWVAKGALVLRPNYRGSAGYGGAFRSLNVRNLGVGDMWDVMTG
                     VDHLVAQGMVDTSRMGAMGWSQGGYISAFLTTNTNRFKAISVGAGISNWVTYYVSTDI
                     HPFTRQYLKANPWVDPAIYAKTSPMTTIRQAKTPTLIQHGEFDRRVPIQNAYELFQGL
                     QDVGVPTRLIVYKGFGHGITKPKEQLAAMVHNWEWFGKYVFGEGGVTAAQP"
     gene            complement(4358..>5315)
                     /locus_tag="VGA78_00975"
     CDS             complement(4358..>5315)
                     /locus_tag="VGA78_00975"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9892456.1"
                     /translation="FGMMMFFMLGGALRSAGDARTPLRLGVTLTALNILLNVILIRGL
                     GPIPAMGTAGAAWGTVIAGGVISLFALSRLVSGTWVVAFPKGMSWRPDWSIIRALFRF
                     GLPAGYQGVAMNIAGVLLLRFIGSLDQSAEAQAAYAVGYTELFSLVTWTSVGLMGATA
                     AVAGQNLGAGHPDRSARAVRVASRIGLALAGTVGLLFLAVPRTLLAVFGMRDPAVVAL
                     GVQLLGYLSVSGLFITVALVYTGGLQGTGDTRSPFYISIVSQIVVPLGLCALFQELGG
                     LEPREIWLAILLGHATRCLLSVSRFRQEKWRHIHVGIEPAPS"
BASE COUNT          929 a         1757 c         1816 g          813 t
ORIGIN      
        1 gtcaccgagt ccttgaaggc ccgccggcgc ctgtcgttgc cgcttccgta gtacagggtc
       61 cgtaccggca gggggcccag cagagtggga tcgggggcct cgaggatctg tttggccagg
      121 acggttgcgg aatcgtcgcg ggcgagacgg gccggctgaa agcaagccga cgccacgagc
      181 atgaggagca gcgcggatcg gtggctcatg ggtccaagtt cctggttcag ggtgccgagt
      241 gcggtgctcg gtgcggtgct gggtgccaag tgctgcggcc aagaatcgca gactcgaggt
      301 cgcaccaaga aaccaggcac ccagcaccgc accgagcacc gcacgcggta cccggaacca
      361 ggaacgagga acctgaaacc taggccgttc ggcccttcac cattcgataa atccatagaa
      421 tcaccaccgc accgaccacc gacatgatga acccggcgct ggcaccaggc tggtacagcc
      481 cgaccagccg tcccagccag gtgccgacca aggcgccgcc gataccgagc aggatcgtta
      541 tgatgattcc gccggggtct cggcccggca tcagagcttt ggcgatcacg ccgacaatca
      601 aaccgatgac gagagtaatg atcagaccca tggccgatcc tccgaagggg gcggaaccct
      661 atgacgggaa aacccgtaga tttgttccag aatgtatcac ccgatcagag gcggtgcgat
      721 gttgacgatt cgtgattcat ggtcgacgat tggacgcatg tctctctcaa atcgttgcgt
      781 cgggctcctg gtgggtgcgg ccgcagtcgg catcccactc tcccggtctt cggctcaggc
      841 agcgcccgat tcggtccgga ttgccagggt agtggcgggg ctccggtcct cggttcaggt
      901 ggcaggccgc cgcccccgga tctggtcctt ggccgagcgg atgtcgcagt accgagcgcc
      961 cggcgtcagc atcgcggtga tttcgggtgg ccgggtgacg tgggcccgcg ggttcggggt
     1021 gaaggaagcc ggcggcgctg acgcggtgac ctcggaaacg ctgtttcagg cggcatcgat
     1081 cagcaagccg gtggccgcca ccggtacctt gcggctggtg gctcagggcc gtctggcgct
     1141 cgataccaac gtcaaccgct acctcgcgtc ctggcaggtt cccgagaacc gcttcaccgc
     1201 gagcgagaag gtcacgctga ggcggctggt gagccacagc gccggactca cggtgcacgg
     1261 cttccccggc tacgcccagg ggatgccggt gccgtcggtg gtgcaggtgc tgaatggtga
     1321 aaagccggcc aacaccgctg cggtgcgggt cgacaccacc cccggtgcca tctggcgtta
     1381 cgccggcggc ggaaccacgg tgcagcagct gttgctgacc gatgtgacgg gcgagccgtt
     1441 ccccgagttg atccgccggc tggtgctcgc cccggccggg atgacccgaa gcacctacga
     1501 gcaaccgctg gccgaggcgc gctggcccga agccgcgcgg gcccatcggg gcaccggaat
     1561 ggtgattccg ggacggtggc atacctatcc cgagatggcc gccgcggggc tgtggaccac
     1621 gcccaccgac ctggctcgct gggcgctggc gattgccgcc gcccgcgcgg gaaccgattc
     1681 gaccctgttg ccgcccgcgc tggccgccga gatgctgaca ccgcagaagg ggagcttcgg
     1741 cctgggtccg tcgctgagcg gggccggtcg cgccttccgg tttggacatg gtggcgccaa
     1801 cgaaggcttc cgctccaacc tgctctactt cccggaagcc ggggtcggag ccgccgtgat
     1861 ggtgaactcc gacaacggcg acgcgctgat tcaggagatc ttctacgcga tcgccgccga
     1921 attcggctgg cccgattacg gcccccgcca gatcagcgcg gtcccgcgcg acagcgcggc
     1981 cctcgccgcc gccgccgggg tgtacgacat ggaattcaac cggcagcggt ttccgttgac
     2041 cgtgcggttc gaacagggcg cgctgagcgc gagcctgccc ccctccccgg tagccgagga
     2101 gctggtgccg gtggacagca tcgcctatgc gagcctgtcc cgggggtggc ggtacgaaat
     2161 ccggggcgac tccctgaccg tggtgatcga ggacggtccg cgaatctccg gcaagaaacg
     2221 gtagttggga cgcctactcg tggaggacca atgcgcgcat ttgtagtgtt aggcgtgggg
     2281 ctgttgctga ccgccagcct gcctgaccgc ctgaccgccc agggaacgcc gccgctcgag
     2341 gacgtggttt ccctgcgcca ggcgggcgga gtggccgtct cgcccgacgg ccgccgggtc
     2401 gcctacacca tccggactac cgactggaaa gagaaccgct tcgacaccga gatctggctg
     2461 gcgcagggcg gggccgagcc gctgcagctc acccgcagcg tgaagggttc ggctaccacg
     2521 ccccgctggt cgcccgacgg gaaatggatg gggtttctct ccgaccgggg ggaacgccgg
     2581 cagttgttcc tgatctcggc gttaggcggc gaggcggtgc agctgaccaa ggcggccacc
     2641 agcgtcacca acttccgctg gtcgcccgac ggcaaggtga tcgccttcac tgcagcggag
     2701 gcggagaacg acgcgatgaa gcagcgcaag gacaagtacg gcgagttcgc ggtcgaggac
     2761 gcggattggg ttcccaatca cctgtggctg gtggatgtcg acccggccaa gggcgccgac
     2821 ggggcgacgc ccgaagcccg ccggctcacg gagggccggg cgttcaccgt gggcggcttc
     2881 cagtggtcgc ccgacggcag ccggatcgcg ttcgaccacc aggccgatcc cctgatcacg
     2941 tcgggcatca cggcggacat ttccgtcgtg acggtggcta ccaaggcggt gacccccctg
     3001 gttcgcgcgc caggcggcga caacgggccg gtctggtcgc ccgacggaca gtggctgctc
     3061 ttcggcagca gcggagggga caccacgtcc aacttctacc gtaacaaccg gctgatgaag
     3121 atcgcggccg gcggcggtgc tccgacccga ctgggcgcgg atttcgacga acagatcggg
     3181 ggcgtctcgt ggacagcggc cgggatctac tttgccggct tcgagaaaac ccggcggaat
     3241 ctgtatcggc tcgatcccgc ttccggcgcg gtccagaaag tctgggactc gcccctcacc
     3301 ctcttcgggg tcgatctgac cccagacggc cggaccctgg ccttcacggc ccagacgccg
     3361 agcacgctgt cggaggtgta tctcgtcccc ctcccgtctc ccgtctcccc ggccccgacg
     3421 ccgtcaaagg tcacggacct gagcagccag atctcgagct ggcccgtcgg atcggccgaa
     3481 gtggtgtcct ggaagagccg ggacggcgcc accatcgaag gcgtgctgca caagccgcgc
     3541 gacttcagcc cgtcccagaa atacccgttg ctggtggtga ttcacggcgg ccccaccggg
     3601 atcgacctgc cgctgccggt caccggcggt gtctacccca tcacgcagtg ggtcgccaag
     3661 ggggccctgg tgttgcggcc caactaccgc ggatcggccg gctacggtgg ggcgttccgc
     3721 tcgctcaacg tgcgcaacct gggcgtgggc gacatgtggg acgtgatgac cggggtggac
     3781 cacctggtcg cgcaggggat ggtcgacacc tcccgcatgg gcgccatggg gtggagccag
     3841 ggcggctaca tctcggcgtt cctcaccacc aacaccaacc ggttcaaggc catctcggtc
     3901 ggggccggga tttccaactg ggtcacctac tacgtgtcga ccgacattca tcccttcacc
     3961 cggcagtacc tcaaggcgaa tccctgggtg gatcccgcga tctacgccaa gacctcgccc
     4021 atgaccacca ttcggcaggc caagacgccc accctgatcc agcacggcga gttcgatcgc
     4081 cgggtgccga tccagaacgc gtacgagctg tttcaaggcc tacaggacgt gggcgtcccc
     4141 accagactga tcgtgtacaa agggttcggg cacggcatca ccaagcccaa ggagcagctc
     4201 gcggccatgg tgcacaactg ggaatggttc gggaaatacg tcttcgggga gggcggggtg
     4261 acggcggcac aaccataggt cggaagggtc ggaaggttcg taagagtcgg aatttgctcg
     4321 atccgttccg acgcttacga cccttccgac cttgttgcta ggatggtgcc ggctcgatgc
     4381 cgacgtgaat atgccgccat ttctcctgcc ggaagcggct gacgctcagg aggcagcggg
     4441 tggcgtgacc caggaggatc gccaaccaga tctctcgcgg ctccaggccg ccgagctcct
     4501 ggaacagagc gcagagtccg agcggaacca cgatctgcga gacgatggag atgtagaacg
     4561 ggctccgggt gtcaccagtg ccttgtaacc caccggtgta gaccagcgcc acggtaatga
     4621 acagccccga cacgctgaga tagcccagca gctgcacccc cagcgccacc acggccgggt
     4681 cgcgcattcc gaaaacggcc agcaaggttc gcggaaccgc gaggaagagc agcccgaccg
     4741 tgccggcgag ggcgagtccg atgcgggagg cgacccggac ggcgcgggcg gagcgatccg
     4801 gatggccggc cccgagattc tgccccgcga ccgcggcggt cgctcccatc aggcccaccg
     4861 aagtccaggt gaccagggag aacagctcgg tgtatcccac ggcgtaggcc gcctgggctt
     4921 cggcgctctg atcgagcgag ccgatgaagc ggagcagcag tacgccggcg atgttcatcg
     4981 cgacaccctg gtaaccggcg ggaagtccga agcggaagag cgcccggatg atggaccagt
     5041 cgggccgcca gctcatccct ttcgggaacg ccaccaccca tgtccccgag accagccggc
     5101 tcagcgcaaa gaggctgatc acaccgcccg caatgacggt cccccaggcg gcgccggccg
     5161 tgcccatcgc cgggatgggt cccagcccgc ggatcaggat cacgttcagc agaatgttca
     5221 aggccgtgag ggttacgccc aggcggagcg gggtgcgggc gtcgccggcc gagcggaggg
     5281 caccgcccag catgaagaac atcatcatgc cgaag
//
LOCUS       DASWKS010000027         2512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3337438, whole genome shotgun sequence.
ACCESSION   DASWKS010000027 DASWKS010000000
VERSION     DASWKS010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3337438"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VGA78_00980"
     CDS             complement(<1..426)
                     /locus_tag="VGA78_00980"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9892457.1"
                     /translation="MNLVTLRGVSLGYGARAVLQSVDLSIVTGDFLGLVGPNGSGKTT
                     LLRGLLATLSPLAGSITIAPGVRFGYVPQREQIDARYPLRVLDVVLMGRYSRIGVLRR
                     PSAADRAAAVEALAHVGIADLAEKQLADLSGGQKQRTLIA"
     gene            complement(423..1319)
                     /locus_tag="VGA78_00985"
     CDS             complement(423..1319)
                     /locus_tag="VGA78_00985"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEX9892458.1"
                     /translation="MKGIALVVTLLGTFSDAPQLRVVTSTTDLWDIARQVGGARVVAR
                     HISEGYQDPHFVEAKPSFVLELQKADVFAYVGLELERGWAPVLLAGARNRKIQQGAPG
                     NLDVSRTIPLLDIPSGNVDRSQGDVHPLGNPHYWLDPANASRIAALLRDTFSRLDPEG
                     APDYAANTQAFESQLAAAAREWAPALARLKGKPVVAWHTSWRYLAEYTGLNIVGFMEP
                     KPGVPPSPSHVVGLIQTMQHTGARLIIMEPWYDRKMADFVAARTGAKVLVLPPSVGGA
                     KGLDDYVSLMRHAIESIAGALP"
     gene            complement(1330..>2512)
                     /locus_tag="VGA78_00990"
     CDS             complement(1330..>2512)
                     /locus_tag="VGA78_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892459.1"
                     /translation="DATRQGECMERWGRLARLQKALLSTLVLVAPAAAQQQGTGPTNP
                     RLMPDISVVGDLVFDLSRRSTQEGGARFNVREMEVAFQAAVDPYFRGDVFFGYSDVEG
                     VSIEQAYLTATALPWQLEARLGRFLVPMGKLPTTHRHDLHTLEFPWVVQRFMSPEGLK
                     GTGGYVSKVVSPLGFYQEVIVMVLDRLGEAPEDLTPDEPSNAKLSGLGYVARLRNYWD
                     LTQHANLELSASAGTSLTPQPVEGVEEFNAINARQSLLGVDLTYRWRPLQQGLYRSFI
                     LQAEYLRQINQQDPDLPTGVTELQYLGPRRAFDGGYLFARYQLTRRGYIGMRGDLVED
                     PEADGRTLRAASAYWQFFPSEFSKLLAGYERLWPEGASSSGRLILQATFALGPHRPHP
                     F"
BASE COUNT          433 a          863 c          819 g          397 t
ORIGIN      
        1 agcgatcagg gtccgttgct tctgcccgcc cgacagatcc gccagctgct tctcggccag
       61 gtcggcgatg cctacatgag caagcgcctc gaccgccgcg gcgcgatccg cggcggacgg
      121 ccggcgcagc accccgatgc gggagtaccg gcccatcagc accacgtcca gcacccggag
      181 cggatagcgg gcatcgatct gctcccgctg ggggacgtag ccgaagcgga ccccgggcgc
      241 gatcgtgatg ctgccggcca gcggggacag ggtcgccagc agccctcgga gcagggtcgt
      301 cttgccggag ccgttcggcc caaccagccc gaggaagtcg cccgtgacga tggacagatc
      361 cacgctctgc aggacggcgc gagcgccata ccccagcgac acccctcgca gggtgacgag
      421 attcatggta gcgcgccggc gatcgattcg atcgcgtgcc gcatcagcga gacgtagtcg
      481 tccagtccct tcgcgccccc gaccgagggt ggcagcacca gcaccttcgc cccggtccgc
      541 gccgccacga aatcggccat cttgcggtcg taccatggct ccatgatgat cagcctggcg
      601 ccggtgtgct gcatggtctg gatcagcccg acgacatgag acggcgaagg cggcacgccc
      661 ggcttgggct ccatgaatcc gacgatgttg agtccggtgt attcggccag gtaacgccag
      721 ctggtgtgcc aggccacgac cggcttgccc ttgaggcggg ccagcgccgg cgcccattcc
      781 cgcgcggcag cggcaagttg cgactcgaag gcctgcgtgt tggccgcata gtcgggggcg
      841 ccttcgggat cgagccgtga gaacgtgtcc cggagcagtg cggcgatccg gctggcgttg
      901 gctggatcca gccagtaatg cggattgccc agcggatgca cgtcgccttg cgagcggtcg
      961 acattgccgc tcgggatgtc gagcagcggg atcgtacgcg agacgtcgag gttgccggga
     1021 gcgccctgct gaatcttccg attccgggcc cccgccagga gtaccggggc ccagccccgt
     1081 tccagctcca ggccgacgta cgcaaacacg tccgccttct gcagctccag cacgaagctt
     1141 ggcttggcct cgacgaagtg cgggtcctgg tatccctcgc tgatgtgacg ggcaaccact
     1201 cgcgcgccgc ctacctgtcg agcgatgtcc cacaggtccg tggtgctggt gaccactcgc
     1261 aattggggag catcggagaa cgtccccagc aacgtcacca ccaacgcaat gcctttcatg
     1321 acatacctct caaaacggat gcggccgatg aggaccgaga gcaaaggtcg cctgcagaat
     1381 caggcgcccg ctcgatgacg ctccctcggg ccagagccgc tcgtagccgg ccaggagttt
     1441 ggagaattca ctggggaaga actgccagta ggcggaggcg gcacggagcg tacgcccatc
     1501 cgcctcgggg tcttccacca gatcccctcg catcccgatg tagccccgcc gggtcaattg
     1561 atagcgcgcg aacagatagc caccgtcgaa tgcccgacga ggacccaggt actggagttc
     1621 cgtgaccccg gtcggcaaat ccggatcctg ctggttgatc tgtcgcaggt actccgcctg
     1681 gaggatgaac gagcggtaga gtccctgctg gagcggccgc cagcgatagg tcagatccac
     1741 ccccaggagc gactggcggg cgttgatggc attgaactcc tcgaccccct ccaccggttg
     1801 gggcgtgagg ctcgtcccgg cgctggccga cagctccagg ttagcgtgct gggtgagatc
     1861 ccagtagttc ctgaggcgtg cgacgtagcc caggccggag agcttggcgt tggacggctc
     1921 gtcgggcgtc agatcctccg gggcctctcc cagccggtcg agcaccatca cgatcacttc
     1981 ctggtagaag ccgagcggcg acaccacctt gctcacatag ccgccggtcc ccttcaggcc
     2041 ttcgggcgac atgaagcgct ggaccaccca ggggaattcc agggtgtgca ggtcatgccg
     2101 gtgggtcgtc ggcagtttcc ccatggggac cagaaaccgg cccagccgcg cctccagctg
     2161 ccacggcagc gcggtggcgg tgagatacgc ctgctcgatc gacacccctt cgacgtcact
     2221 gtacccgaag aacacatcgc cgcggaaata cggatccacc gccgcctgga acgcgacctc
     2281 catctcccgg acgttgaagc gggcaccacc ctcctgggtc gagcggcgcg acaggtcgaa
     2341 gaccagatca cccacgacgc tgatatccgg catcagccgc gggttggtcg ggccggtgcc
     2401 ctgctgctgg gccgcggccg gcgccaccag gaccagggtc gagagtagag ccttctgcag
     2461 ccgagccagc cttccccatc tctccatgca ctccccctgc ctggtggcgt cc
//
LOCUS       DASWKS010000028         5012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1861505, whole genome shotgun sequence.
ACCESSION   DASWKS010000028 DASWKS010000000
VERSION     DASWKS010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861505"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VGA78_00995"
     CDS             complement(<1..210)
                     /locus_tag="VGA78_00995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX9892460.1"
                     /translation="MTQGQHPTITGFLERADVVFGPQYSAVLHGSAVRGDYLPGRSDL
                     NLLVVAEGVGPDQLRGLTSGLALFES"
     gene            complement(210..1067)
                     /locus_tag="VGA78_01000"
     CDS             complement(210..1067)
                     /locus_tag="VGA78_01000"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEX9892461.1"
                     /translation="MRPKAMRAVVLLQLAAGSLAQAQDQGERLFPPQPTGYVTDVAGV
                     IDAGSSQAMTAKIQRLRDATGAEIAVVTLPTIGDRAAVDVAVAIGRAWGVGAAADVGD
                     QRRNAGLIMLLVPRREGDPNSGQIFIATGRGLEGIVTDATAGRVRDLMRPHLSAGEYG
                     AGLQVGVDALAAIVAQGLGVSDSSLTQGGRAVHRRGTGQTSPRVTSLIVSAVVVAIGI
                     AIISSMIRGAMMPPGRRRRRRRGRDIFFGGPGWGGGFGGFGGGFGGGGFGGFGGGGGF
                     SGGGAGGRF"
     gene            1071..1802
                     /locus_tag="VGA78_01005"
     CDS             1071..1802
                     /locus_tag="VGA78_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892462.1"
                     /translation="MPALRKAALVIRTVIVRSFALLALAGCGPQDVVIAVSVPNEDGV
                     ETPLPGVRLVLLPFDRDSVLTVLENRAPSARPGSTRLDSLFADFRGPFNQYLQLAYAI
                     DRTRDAVAATSDSAARGRLQDSLQALTTSLEQARRALNTTRARLEPAIDSERTRLRGW
                     EDTAFRSYDSLANALTRQSHRDPIVDSTRSTGMTRVRLRQGDWWVVARAVNVRDPNSE
                     WYWNVKVDGDTVRLRPGNGRSRPRI"
     gene            1802..2413
                     /locus_tag="VGA78_01010"
     CDS             1802..2413
                     /locus_tag="VGA78_01010"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX9892463.1"
                     /translation="MRILMAGMALVLTTAPAHAQRGTDPLAMRTKGSASAPITVYEMS
                     DFQCPFCKRHVDQTFPILEKEYIATGKVRWIFINYPLVSIHPNAVPAAELAMCAGRQG
                     KFWEAHHLVFRTQRVWGPLKDPGPFLASLVDSLRLPKPAMLPCLEKGEAVQEIRTDAE
                     GAARTGAQSTPSFYIEGGLMAGAQPIELFRHILDSIYAVKTRR"
     gene            complement(2504..3241)
                     /locus_tag="VGA78_01015"
     CDS             complement(2504..3241)
                     /locus_tag="VGA78_01015"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX9892464.1"
                     /translation="MSYWKSAREPRHSLIFVLPLLLAYEALAWTLGRTGQAAVRNGAD
                     VLLKELFVALGGLYGLRAFAVLLLGTGAFLVIRDIRRSGRPVPRVLGGMVVESVVYAL
                     TLGVVASAVTSFLLTGRLALVQGEPLQQFSLPVQLMVSLGAGIYEELVFRVLLVAGLA
                     ALAHKVLGWKPLPSGIMAALLGALIFSGFHYLGPYGDPWRLDTFTFRAVAGLLFSGLY
                     LTRGFGIAAWTHALYDVFLTVAGNGGR"
     gene            3373..4695
                     /locus_tag="VGA78_01020"
     CDS             3373..4695
                     /locus_tag="VGA78_01020"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HEX9892465.1"
                     /translation="MSRTSLAYRLLVRAAVGAIPLAAPFHAKLARSHQRRRGALERLT
                     AWARAQRDPRRPLVWMHAPSVGEGLQARAVLQRLQARRPDWQIAYTYFSPSAEEFARG
                     QPADISEYLPYDTPEAAREALDLLQPSALVFAKLDVWPELATSAAERGIPAGLIAGTV
                     SPVSGRVGWPSRLLIRPGYAALSAVGAIADSDAERLIGLGVAPHRIQVTGDPRYDSVL
                     DVISNVSPDDPLVALGRAAPTLVAGSTWPADESVVLEAFAAVRSTHPEARLMLVPHEP
                     TPDHLARTETLAGRVGLRAPVRLGPNPAPDSWILVDRTGVLARLYGAGTMAYVGGGFG
                     RAGLHSVLEPAAWGLPVVFGPEWRNSREAAVLQQAGAGCSLPRGSTAAAARLAGIWRA
                     WLSNEAARGEAGERARKVVRDGAGAAERSAALVEQLVVGFPGPVPTDR"
     gene            complement(4682..>5012)
                     /locus_tag="VGA78_01025"
     CDS             complement(4682..>5012)
                     /locus_tag="VGA78_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892466.1"
                     /translation="CAQTFDATALGIPVTMASQAGPAPQGERFRVNSTSLFAAWGLLP
                     ITRASLEKSLAHQLVGARSVSNVKIRVRSRWSDLLITGLTLGLFVPRTVTFEGVVSGV
                     AADTTGR"
BASE COUNT          855 a         1767 c         1669 g          721 t
ORIGIN      
        1 gctctcgaac agcgccagcc cggaggtcag cccgcggagc tgatcgggac ccacgccctc
       61 agccaccacc agcagattca ggtccgagcg gcccggcagg tagtcgcccc gtaccgcgga
      121 accgtgcagg accgccgaat actgcgggcc gaacacgaca tcggcgcgct ccaggaaccc
      181 ggtgatcgtc gggtgctgac cctgagtcac tagaatctcc ctccagcccc gccaccgctg
      241 aatccgcctc cgcctccgaa gcctccgaat ccaccacccc caaagccccc gccgaagcca
      301 ccaaacccgc caccccaacc gggaccgccg aagaagatat cgcgcccccg ccggcgccgg
      361 cgtctgcgac ccggcggcat catcgcgccc cggatcatcg agctgatgat ggcgatgccg
      421 atcgcgacga cgacggcgga gacgatcagg gacgtgacgc ggggggaggt ctggccggtc
      481 ccgcgccgat ggaccgcgcg cccaccctgg gtgagactcg agtcgctgac gccgaggccc
      541 tgggcgacga tggcggcgag agcgtccact ccgacctgga gcccggcgcc gtattcaccg
      601 gccgatagat ggggccgcat gagatcgcgc acccgtcccg cggtcgcatc ggtgacaatg
      661 ccctccaggc cgcgtccggt ggcgatgaag atctgacccg aattcgggtc gccctcccgc
      721 cgcggcacca gcagcatgat cagacccgca ttgcggcgct gatcaccgac atcggcggcg
      781 gcccccaccc cccaggcccg tccgatcgcc accgcgacat cgaccgcggc gcggtcccca
      841 atggtcggca acgtcactac cgcgatctcg gctccggtgg cgtcacgcaa ccgctggatc
      901 ttggcggtca tcgcctggct ggagccggca tcgatgacgc ccgccacgtc ggtgacgtac
      961 ccggtcggtt ggggcggaaa aagccgctcc ccctgatcct gggcctgcgc cagcgatccc
     1021 gcggcaagtt gtagcagcac caccgcgcgc atagctttcg gcctcacttt atgcccgccc
     1081 tccggaaagc cgccctcgtg atacgtaccg tgatcgtccg cagtttcgcg ctgctggcgc
     1141 tggccggttg cgggccgcag gatgtcgtca tcgcggtaag cgttcccaac gaggacgggg
     1201 tcgagactcc cctgcccggt gtgcgcctgg ttctgctgcc gttcgaccgg gacagcgtgc
     1261 tcaccgtgct ggagaaccgg gccccatcag cgcggcccgg cagcacgcga ctcgacagcc
     1321 tctttgccga tttccggggt ccgttcaacc agtacctcca attggcctac gccatcgacc
     1381 ggacccggga cgcggtggcc gcgacctccg actcggccgc gcggggccgg ctgcaggatt
     1441 cgctgcaggc gctcaccacc agcctggagc aggcgcgccg ggcgctcaac accacccgcg
     1501 cccggctcga gccggccatc gattccgagc gcacccggct ccgcggctgg gaagataccg
     1561 ccttccggtc ctatgacagt ctggccaacg cgctgacccg gcagagtcac cgggacccga
     1621 tcgtcgactc cacccgctcc accggaatga cgcgggtccg gctgcgacag ggcgactggt
     1681 gggtggtggc ccgggcggtg aacgtgcggg atcccaattc cgaatggtat tggaacgtca
     1741 aggtcgacgg cgataccgtg cgcctgcgtc ccggcaacgg ccgttcccgg ccgaggatct
     1801 gatgcgaatt ctgatggctg ggatggcgct ggtcctgacc accgccccgg cgcacgcgca
     1861 acgcggcacc gatcccctgg cgatgcgcac caaaggctcc gcctcggcgc cgatcaccgt
     1921 ctacgagatg tcggacttcc agtgtccctt ctgcaagcgc cacgtggacc agacctttcc
     1981 gatcctggaa aaggagtaca tcgccaccgg gaaggtgcgc tggatcttca tcaactatcc
     2041 gctggtgtcg atacacccca acgcggtgcc ggcggccgag ctggcgatgt gcgccgggcg
     2101 gcagggaaag ttctgggagg cccaccacct ggtgtttcgg acccagcggg tctggggtcc
     2161 tctaaaagac ccgggaccgt ttctcgcgag cctggtggat tcgctgcgcc tccccaagcc
     2221 ggcgatgctt ccctgcctgg agaagggtga agcggtgcag gagatccgga ccgacgcgga
     2281 gggagcggcc cgaaccggag cgcagagcac gccctcgttc tacatcgagg gcgggttgat
     2341 ggcgggtgcc caaccgatcg agctgttccg acacattctc gactcgatct acgcggtcaa
     2401 aacccggcgg taaagggtca ccccacggtg aacagggaac agtgaacggt taacgccaag
     2461 gaatgccggg aggatggtcg gttcactgtt tacggttcac cgtttaccgg ccgccgtttc
     2521 cggcgacggt cagaaaaacg tcgtacaacg catgggtcca ggccgcgatg ccgaatcccc
     2581 gagtcagata gagcccgctg aagagcagtc cggccaccgc ccggaaggtg aacgtgtcca
     2641 accgccaggg atcaccgtac ggaccgagat agtgaaagcc ggagaagatc agggcaccga
     2701 ggagcgcggc catgattccc gagggcagcg gcttccatcc caggactttg tgcgccagcg
     2761 ccgccagccc ggccaccagc aacacccgga acaccagctc ctcgtagatc ccggccccga
     2821 gtgacaccat cagctggacc ggcagggaga actgctgcag cggctcgccc tgaaccagag
     2881 cgagcctgcc ggtgagcaga aacgaggtga ccgcgctcgc cacaacccca agcgtgagcg
     2941 cgtacaccac cgactcgacc accatgccgc cgagcacccg gggcacgggg cggccgctcc
     3001 gccggatgtc gcggatgacc aggaaggccc cggtgccgag caacaacacc gcgaaggcgc
     3061 ggaggccgta gaggccgccc aacgccacga agagctcctt gaggagcaca tcggcgccgt
     3121 tgcgcaccgc cgcctgcccg gtccggccca gggtccaggc caatgcctca tacgccagca
     3181 gcagcgggag gacgaagatc aggctgtggc gcggctcgcg agcggatttc cagtaactca
     3241 tgtctcagtc gaacggtcgg aaaggtcgca aagagtcgga agagtcggaa gagtcggaac
     3301 aaaggtacac ccaggcgact tccgactcat ccgacccttc cgaccccgtc gtcagcccca
     3361 ccatacttag aagtgtcccg gacttctctc gcctatcgcc tcctggttcg agcagcggtg
     3421 ggagccattc cgctcgccgc gccgtttcac gccaagttgg ctcgcagcca tcagcgacgc
     3481 cggggggcgc tggagcgatt gacggcgtgg gcccgagccc agcgtgatcc gcgccggccc
     3541 ctggtctgga tgcacgcgcc ctcggtgggt gagggactgc aggcccgcgc ggtcttgcag
     3601 cggctgcagg cgcggcggcc cgactggcag atcgcctata cctacttcag cccctcggcc
     3661 gaagaattcg cccgagggca gccagccgat atctcagagt atctgcccta cgacactccg
     3721 gaggctgccc gcgaagcact ggatctgttg caaccgtccg cgttggtatt cgcgaagctc
     3781 gacgtctggc ccgaattggc cacctccgcg gcggaacgcg gcatcccggc aggcctgatc
     3841 gccgggaccg tgagtccggt gagcgggaga gtcggctggc cctcacgact gctgattcga
     3901 cccgggtatg cggcgctctc cgcggtgggc gcgatcgccg acagcgacgc cgagcgcctg
     3961 atcggcctgg gcgtggcacc ccaccggatc caggtgaccg gcgatccccg ctatgacagc
     4021 gtgctcgacg tcatcagcaa cgtaagcccc gatgacccct tggtggcgct gggtcgggcc
     4081 gcgccgacgc tggtggccgg gtccacctgg cccgccgatg aatcggtggt cctggaagcc
     4141 ttcgcggccg tccggagcac tcatccggag gctcgactca tgctggtgcc acacgaaccc
     4201 accccggacc atctggcccg caccgagacg ctggcggggc gagtgggttt gagggccccg
     4261 gtgcggctcg gacccaaccc cgcacccgat tcgtggatcc tggtcgaccg caccggggtg
     4321 ctcgcccggt tgtacggggc agggacgatg gcatacgtgg gaggtgggtt cggccgagcc
     4381 ggactgcatt cggtgctgga accagcggcc tgggggctgc cggtggtctt cggccccgag
     4441 tggagaaaca gccgcgaagc ggccgtcctg cagcaggcgg gcgcgggctg ctccctgccc
     4501 cgcggctcca ccgccgcggc ggctcgactg gcggggatct ggcgggcctg gctctccaat
     4561 gaggcggccc gcggggaggc cggtgaaagg gcgcgcaagg tggtacggga tggtgccggc
     4621 gcggcggaac ggagcgcggc gttagtggag caactcgtcg tggggttccc gggaccggtg
     4681 cctaccgacc ggtagtgtcc gccgcgactc cgctcaccac gccttcgaac gtcacggtac
     4741 gaggcacgaa cagtcccagc gtcagcccgg tgatcaacaa gtcactccac cggctccgca
     4801 cccggatctt cacgttggag acactccggg cgcccaccag ctggtgggcc agcgatttct
     4861 cgagcgacgc ccgggtaatc ggcagcaggc cccaggcggc aaacaggctg gtggagttga
     4921 cccggaagcg ctcgccttgg ggcgccgggc cggcctggct ggccatggta accgggatgc
     4981 cgagcgccgt cgcgtcgaag gtctgcgcgc ac
//
LOCUS       DASWKS010000029         8353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_12686, whole genome shotgun sequence.
ACCESSION   DASWKS010000029 DASWKS010000000
VERSION     DASWKS010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8353
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12686"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..909)
                     /locus_tag="VGA78_01030"
     CDS             complement(256..909)
                     /locus_tag="VGA78_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892467.1"
                     /translation="MHARTLIVAAVMTGIWAAACSKPTSENSKSNETGAAQSAPEIFL
                     VDRAGTDTPLVSELEVGRDPKLALVGPAERKVPEPRARRNVSAAASSSHVHAAVPTAE
                     LVPEMGRTSIALASAPENLPAASMPATPAGEVYGSGGDGVAPLPAEGNRGPVIIIRGG
                     RGGPLDDCAIHGRGGHGGPGIAINRSVPGFGGGAMVNERAPRLGGSGRSGFPRGGIR"
     gene            1085..1582
                     /locus_tag="VGA78_01035"
     CDS             1085..1582
                     /locus_tag="VGA78_01035"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892468.1"
                     /translation="MTAWGATRVGCSLLLAGLAGCQPPSSRSGQDDAALADTLRARIE
                     DAYDFSRPGVADRMNALYPDTGRVISASGGQITASADSLRAGIAAFWQNVGRHMRDPK
                     WVWGEVYVDRLSRDAAVLTATWSIPHIAPTGRPHVIRGAWTAVFRRVAGKWLIVAEHL
                     SVPPT"
     gene            1793..1912
                     /locus_tag="VGA78_01040"
     CDS             1793..1912
                     /locus_tag="VGA78_01040"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX9892469.1"
                     /translation="MRSFVAVADAGSLGAGGRVLALAQPTLSRQMDRPESALR"
     gene            1939..2082
                     /locus_tag="VGA78_01045"
     CDS             1939..2082
                     /locus_tag="VGA78_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892470.1"
                     /translation="MHPTPAGVVLQREIPAVLAEVAGPVQSARWAGRGVNGRCVVDQW
                     RPR"
     gene            2150..2731
                     /locus_tag="VGA78_01050"
     CDS             2150..2731
                     /locus_tag="VGA78_01050"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HEX9892471.1"
                     /translation="MNLVERVRNILLQPKKEWTVIDAEPATSASLYSGYVVPLAAIPA
                     IAGFIGTSILGFGVLGSTVRVPIGRGITGAVFQYVAALVGVYVLALIIDALAPNFGGT
                     KSQIQALKLAVYSSTASWIAGIFLLLPGLRALSFLGLYSLFLLYLGLPVLMKSPEDRS
                     LGYILVVIVSAIVIYAVIGAVGSRLTGFGMWGY"
     gene            2801..4372
                     /locus_tag="VGA78_01055"
     CDS             2801..4372
                     /locus_tag="VGA78_01055"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9892472.1"
                     /translation="MRLPLGFLLGWLALVPGPDAYGQQEAGSPSLSSYHRARAIVDRA
                     LAAMGPSGGAISSLVVEGTGYEDLTAELQGMSPEAESRRPHREILAVDVASGGVAYER
                     HTARNDRSLRWRRFILTPDARGVVDFTTGFSSLRAAPVPDTERAAYRRRVPLFLLQEL
                     AQRPAGLRWLGQTSRQGKTLDLVAAPLPTGAQLVMFFDAAPQLARVEYLLEFPGLGDT
                     PIEIEYPIWASHPRLGRFPTGHRVLVGERVLQDVTYSRVLVDDSSAANYLRVPAQPGG
                     SQRAAPRPMAPMRAAPPPGTASMVADGVYLVEDLAGFDLMFVDLGGEVLVAEAPGAHP
                     FLDAIPARNYPPGPPVSREYLSLIQRTLPGLPIRYLVLSHHHSDHLGGVREFIAAGAT
                     VLAPPGDTALVRRISRLPHTLKSNLSHFAADARIETVNGRRVISGRDRSVEIHQVGPN
                     PHTDDNLLLWIPASRILFQGDLFYFSQGEPPPVDRETMNRFFGDWVAKQGLRPARIYG
                     MHNDGFATLDDLPRR"
     gene            complement(4585..5058)
                     /locus_tag="VGA78_01060"
     CDS             complement(4585..5058)
                     /locus_tag="VGA78_01060"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9892473.1"
                     /translation="MQAKDLMCPNPATCSPDTPIAEAARLMNEYDCGCLPVEQEHSAP
                     RVVGVITDRDIATRAVARGKSPDTRVRDIMSADPSCCYPDDDVKSVERIMAERQVRRV
                     PVVNGDGGCVGIIAQADLARSHVPARELARTVERISEPSPAPRRESPIGVHPARQ"
     gene            complement(5352..8240)
                     /locus_tag="VGA78_01065"
     CDS             complement(5352..8240)
                     /locus_tag="VGA78_01065"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX9892474.1"
                     /translation="MANSSLTPSVLRSRFGRRLLLLFVVCSLLPSLALALLSFGTVTR
                     QLRQASLERLEHSGRLLANDITDRLRFIQQDLSRLAVRSQPCPPTTLEIDDPACDGSL
                     EYSLTALAFVPTGGHPIGLFGPLKDVPVLTEADQQQLAAGRAVVIDRVVRGRPRIYLV
                     RRTGSAGWFIGQLDPAWLWGGVDRTPLIPTMQFHVVNAAARVISQPDVLLQELPESVR
                     SGFDGNTTGTFDWEIDEVPFLAAFAPVPDVDRLALPLWTLVVSEARTAVIAPMDDFKR
                     TFPVVIALAVGAALVLSLSQLRRSLAPLDALHAGTRRLTARQFDQPVVVTSRDEFAEV
                     AASFNAMTNQIQRQFSALATAAEVDRAVLSSVDTNRIVQTVLQRMRDVCACDVVGVTL
                     LDPFGGEEVQTFVEGESPDRVMTSWSGWLMPGERERLSAGPTTLEADGDLPVYLQPLA
                     QRGSQSLLVFPLRYQSDLLGAIALGSRGTTLRADEDLVHAKRLAGQVALALTNARMVD
                     QIRRLAFYDSLTGLPNRLSFKERLGEALERGQREGSQVGVCFLDLDHFSRINDTLGHK
                     VGDRLVQEVGRRVSARCGEVAAIAEVARLGGDEFTVMVSDLSGPEVVETLARRILESF
                     ATPFALDGYEVFISTSIGVAIFPADGDDLETLLKNADVAMYQAKQKGRNRIELYADAM
                     SARAVRRLTLENHLRKAMEAGQFELWYQPIANLKTGRIESAEALIRWQHPELGWVPPG
                     EFIPVCEESGLIVPMGEWILRTVCAQNVAWQREGLTPIPVAINISGQQLRSDATVELV
                     RQVLETTGLSPQHLILELTESILMQGEGEASTALQALARLGVGLAIDDFGTGYSSLSY
                     LKHFPVNTVKIDKSFVLEVTSDADDAAITSAIIAMGSALGLKVIAEGVERQDQVAFLR
                     EQGCDAIQGYLVGYPLAAPEFRECLVENGVIGALQGERRSKRRLRRAV"
BASE COUNT         1316 a         2841 c         2777 g         1419 t
ORIGIN      
        1 ggtgctgcgc tcggttccgg ttcccggcac gccggacggc gtggcggtac tggaggcgcc
       61 gtgaccggag ggttcggcct gtggcactcg ctggaaggtc accgcgacgc cggcctgctc
      121 atcgcccgaa tcgggtttgg cgcggccgcg ttctgccttg gacaaatacg acgcccccgc
      181 gacagtcggc gtcgcggggg cgttcgggtg cggctcgctc agtctcgggg cttatcgcgc
      241 ccctcccgga ctcctctagc ggataccccc gcgagggaag ccagaccggc cacttccgcc
      301 cagtcggggg gcgcgctcgt tgaccatggc tccgccgccg aagccgggca cactgcggtt
      361 gatggctatc ccgggcccac catgcccacc tcgcccgtgg atggcgcagt catcgagcgg
      421 tccccctctg ccaccccgaa tgatgatcac cggtccgcgg ttgccttccg caggcagcgg
      481 ggcgacaccg tcaccgcccg agccgtacac ctctccggca ggggttgccg gcatggacgc
      541 cgcgggcaga ttctccggcg ccgaggccag ggcgatgctg gtccgtccca tctcgggaac
      601 cagctcggcg gtcgggacgg ccgcgtgaac atgagaggag ctcgcagcgg ccgagacgtt
      661 tctccgcgct cgaggctcag gcactttccg ctcggccggg cccaccagag ccagcttggg
      721 atcccgcccg acctccagct cggacaccag tggcgtgtcg gtgccggctc ggtcgacgag
      781 gaagatctcg ggggcgctct gggccgcgcc ggtttcgttg ctcttgctgt tctcggaggt
      841 gggcttggaa catgcagcag cccagatgcc cgtcatcaca gcggcgacga tgagggttcg
      901 tgcgtgcacc ggctcctcct gacatcaagg gtcacagatt gaagccacag cgggcaggac
      961 ctggtggtaa tcggcatatg ccgggccaca ccatatatag cgggttcccc cagggaagcg
     1021 cccgggtgcc cggggccacc tgtcaccgtc gtggtacacc gggccgtctc acgaggtaga
     1081 catcatgact gcatgggggg ccacccgggt agggtgcagc ctgctcctgg cgggactggc
     1141 cgggtgccaa ccgccgtcgt cccggagcgg tcaggatgac gccgcgctgg ccgacaccct
     1201 gcgggcccgg atcgaggacg cgtacgattt cagccgtccc ggcgtggccg accggatgaa
     1261 cgcgctctac cccgacaccg ggcgggtcat ctcagccagc ggcggacaga tcacagcctc
     1321 cgccgactct ctgcgggcgg gcatcgcggc cttctggcag aacgtcgggc ggcacatgcg
     1381 cgatcccaaa tgggtctggg gtgaggtgta cgtcgaccgg ttgagccgcg acgcggcggt
     1441 gttgaccgcc acctggtcga tcccgcacat cgcacccacc ggccgtcccc acgtcatccg
     1501 gggcgcctgg accgcagtct tccggcgcgt cgccggaaag tggctgatcg tagcggagca
     1561 cctttcagtc ccccccacct gacgccgccg gccccagggc cggtctcgcc aatccagtca
     1621 gtgcccgcgc tcgaacggac cctgacggca ctcggtattc acgagtacca ggtccgcgac
     1681 ccgatttcct ctctctggcc gcctgcgacc gcattgctcc gtaacgtgct cgacgtgctc
     1741 cgacaagtcg gtcggggtgc cgggccttcc tcccggcttg gagctgcggt acttgcgttc
     1801 gttcgttgcg gtggcagacg cgggaagcct gggtgctggg ggacgggtcc tcgcgctggc
     1861 ccagcccacc ctctcccgtc agatggaccg gccggagtcc gccctccgct gaccctgctg
     1921 cagcggagcg gtcgcggggt gcatcccacg ccggctggcg tggtgctgca gcgcgaaata
     1981 ccggcggtgc tcgccgaagt ggccgggccg gtgcagagcg cccggtgggc cgggcgcggc
     2041 gtcaatggcc gatgtgtcgt ggaccagtgg aggccgcgct gagccttatc gccactatcg
     2101 cttctcccga gtcgcggtac cttctcgcgt cccccatggg agccatcctg tgaacctggt
     2161 cgagcgggtc aggaacatcc tgctgcagcc gaagaaggaa tggactgtca tcgacgccga
     2221 gccggccacc tcggcgtcgc tctactccgg atacgtggtc ccgctcgccg cgatcccggc
     2281 gatcgcgggg ttcatcggca cctccatcct gggctttggg gtcctgggct ccaccgtccg
     2341 cgtgccgatc gggcggggca tcaccggcgc cgtgttccag tatgtggcgg ccctggtcgg
     2401 ggtctatgtc ctggcgctca tcattgacgc tttggcaccc aacttcggcg ggaccaagag
     2461 ccagatccag gcgctcaaac tcgccgtcta ctccagcacg gcgtcgtgga tcgcggggat
     2521 tttcctgctg ctccccgggc ttcgggcatt gagcttcctc gggctctact ccctgttcct
     2581 cctctacctc ggcctcccgg tcctgatgaa gtccccggaa gaccggtccc tgggctacat
     2641 cctggtggtc atcgtctccg cgatcgtgat ctatgcggtg atcggcgcgg tcgggagccg
     2701 gctgacggga tttgggatgt gggggtattg agccagccgg gcgaacccgg ggagcccatg
     2761 gtccgtaggg atttgtcaga tctccttcag aacggtggcc atgcgactcc cccttgggtt
     2821 cctgctcggc tggctggcgc tggttcccgg tcccgatgcc tatggccagc aggaggctgg
     2881 tagcccgagt ctgagctcgt accatcgcgc ccgagccatt gtagaccggg cgctggcggc
     2941 gatggggcca tcgggcggtg cgatatcctc gttggtggtc gaggggaccg gctacgagga
     3001 tctcacggcc gagctgcagg gtatgagccc ggaggcggag agccgccggc cccatcgtga
     3061 gatcctggcg gtcgatgtcg cgagtggggg cgtggcctac gaacggcata cggcccgcaa
     3121 cgaccggagt ctccgctggc gccggttcat tctgacgccc gatgcgcgcg gcgtggtgga
     3181 cttcaccacc gggttcagct cgctgcgggc cgctccggtt cccgacactg agcgggccgc
     3241 ctatcggcgg cgggtgcccc tcttcctgct gcaggagctg gcccagcggc ccgccggcct
     3301 ccgctggctg gggcagacct cgcgacaagg aaaaacgctc gacttggtag ccgctcccct
     3361 gccgaccgga gcgcagctcg tcatgttctt cgatgccgcg ccccagttgg cgcgggtcga
     3421 atacctcctg gagtttcccg gcctgggtga cacacccata gagatcgaat acccgatctg
     3481 ggcgtctcac ccccggctgg gtcgctttcc cactgggcac cgcgtcctgg taggcgagcg
     3541 ggtgctgcag gatgtcacct actctcgagt gctggtcgac gattcttcag ccgccaatta
     3601 cctgagagtg ccggcccagc ccggcggatc ccagcgagcc gcgccacggc ccatggcccc
     3661 gatgcgagca gcgccgccgc ccggcacggc atcgatggtg gcggatggcg tgtatctggt
     3721 ggaagacctg gcgggcttcg acctgatgtt tgtcgatctg ggcggcgagg ttctcgtagc
     3781 cgaggcgccc ggcgctcatc cgtttctgga cgcgatcccg gcccggaact acccacccgg
     3841 cccgccggtg agccgcgagt atctgagcct gatccagcgg acgctacccg gactaccaat
     3901 ccgctacctg gtcctcagtc atcaccacag cgaccacttg ggcggagtac gagagtttat
     3961 cgcggcgggg gcgacggtgc tcgctccacc gggcgatacc gcgttggtgc gacgcatctc
     4021 gcggctgccc catacgctca aatccaacct cagtcacttc gcggctgacg cccggatcga
     4081 gaccgtcaac ggacggcggg tcatctccgg ccgggatcgg tcggtggaga tccaccaggt
     4141 cgggcccaac ccgcataccg atgacaatct gctcctgtgg atcccggcct cccggatcct
     4201 gtttcagggg gatctcttct atttcagcca gggggagcct cccccggtcg atcgtgagac
     4261 catgaaccgg ttcttcgggg actgggtcgc gaagcaggga ctgcggcccg cgcggatcta
     4321 cggcatgcac aacgacggct tcgcgaccct ggacgatctg cctcggcgct agtgaggctc
     4381 cgcgccgaca tctcgttcgt cacaaaccgc tcgagctcca cctgacggct gccgaagtcg
     4441 ggctgaggcg tgattatcag cggcatcagc gtaatctgcg gattgaatca gtagggggct
     4501 atccgccgat gccgccgatg gttcacaacg cgctcgaact gcacctgccg gccgccgagg
     4561 tcgggcaata ggtctgacac cgattcactg gcgcgccgga tgcactccaa tgggagattc
     4621 ccggcgcggc gccggtgacg gctccgagat ccgctccacg gtacgggcca gctcgcgagc
     4681 cggcacatgg ctccgggcca gatccgcctg cgcgatgatg ccgacgcaac cgccgtcgcc
     4741 attcaccacc ggaacccgcc gcacctgtcg ctccgccatg atcctctcga ccgatttgac
     4801 atcgtcgtcc ggataacagc agctcggatc agcggacatg atatcccgca cccgggtgtc
     4861 gggcgacttc ccgcgagcca cggcgcgggt cgcgatgtcg cgatcagtga tgacgcccac
     4921 gacccgtggt gcgctatgct cctgctcgac cggcagacaa ccacagtcgt actcattcat
     4981 gagccttgcc gcctccgcga tcggcgtgtc cgggctgcag gtcgccggat tggggcacat
     5041 gaggtccttg gcctgcatgg ttccctcctg ggggcagtgg tcaacgacgt ggggggccgc
     5101 cggttgctcg gcccaccccc tcattcggtg gacgaggcga ttcgaatctc attgcacagg
     5161 aggggtcgca tgatcgcatc agaagggagc agggagcagg gagcagggag cagggagcag
     5221 gatgcaggga gcagggagca gggagccggg agcaggatgc agggagcagg gagggggaaa
     5281 acgggacggg cgatcgtctc ctgcctccta tcctgctccc tgctccctgc tccctgaggt
     5341 ttttagtggt tttagaccgc ccgtcgcagc cgtcgcttgg agcgccgctc cccctgtaag
     5401 gcaccgatca ctccgttctc gaccaggcac tcgcggaatt ccggcgcggc gaggggatac
     5461 cctaccagat agccctggat cgcatcgcat ccctgttccc ggaggaacgc gacctggtcc
     5521 tgtcgctcga ccccttccgc gatcaccttg agaccgaggg cgctgcccat ggcgatgatg
     5581 gccgaggtga tggcggcgtc atcggcgtcg ctggtaacct cgagcacgaa cgacttgtcg
     5641 atcttcacgg tattgaccgg gaagtgtttg aggtagctca gcgacgagta tccggtcccg
     5701 aagtcgtcga tcgccagtcc gaccccgagc cgggccagcg cctgcagggc ggtggaggct
     5761 tcgccctcgc cctgcatcag gatgctctcg gtgagctcga ggatcaggtg ctggggcgac
     5821 aatccggtgg tctcgagcac ctggcggacc aattccacgg tggcgtcgct ccggagctgc
     5881 tggcccgaaa tgttgatcgc gaccggaatc ggggtcagcc cctcccgctg ccaggcgacg
     5941 ttctgggcgc acaccgtccg gaggatccat tcgcccatgg ggacgatcag cccgctctcc
     6001 tcgcagaccg ggatgaactc gcccggaggc acccagccca gctcgggatg ctgccagcgg
     6061 atcagcgctt cggcgctctc gattcgtccg gtcttcaggt tggcgatcgg ctggtaccac
     6121 agctcgaact ggcccgcttc catcgccttg cgcaggtggt tctccagggt gagtcgccgg
     6181 accgctcgcg cgctcatggc gtcggcgtag agctcgatcc ggttgcggcc cttctgcttg
     6241 gcctggtaca tcgccacgtc ggcgttcttg agcagggtct ccagatcgtc gccgtcggcc
     6301 gggaagatcg cgaccccgat gctggtcgag atgaagacct catacccgtc cagcgcaaac
     6361 ggcgtcgcga acgactcgag aatccggcgg gccagggtct ccaccacctc cgggccgctc
     6421 aggtccgaga ccatcacggt gaattcgtcc ccgcccagcc gggccacctc ggcgatcgcg
     6481 gcgacttccc cgcaacgagc gctcacccgc cgacccactt cctgcaccag gcggtctcca
     6541 accttgtgac ccagcgtgtc attgatgcgg ctgaaatggt ccagatcgag gaagcacacc
     6601 ccgacctggc tcccttcccg ctggccccgc tccagcgcct cgcccagacg ctccttgaag
     6661 gacagccggt tggggaggcc ggtcaaactg tcgtagaacg ccagccgacg gatctggtcg
     6721 accatccgcg cgttggtcag ggccagcgcc acttgtcccg ccagccgttt ggcgtgaacc
     6781 aggtcttcgt cggcccgaag ggtggtgccc ctgctgccca gggcaatggc acccagcaga
     6841 tccgactggt aacgcagcgg aaagaccagc aatgactggc ttccccgttg ggccagcggc
     6901 tgcaggtaca ccggcaagtc cccgtcggcc tcgagcgtgg tcggaccggc ggacagacgc
     6961 tcccgctcgc ccggcatcaa ccatccgctc cagctggtca tgacccggtc cggcgattca
     7021 ccttccacaa acgtctgaac ttcctcaccg ccgaacggat ccagcagggt cactcccacc
     7081 acatcgcaag cgcacacatc gcgcatgcgc tggagcacag tctgcacgat ccggttggtg
     7141 tcgaccgagg agagcacggc ccggtcgact tcggccgcgg tggccagcgc ggagaattgg
     7201 cgctggatct ggttcgtcat ggcgttgaac gaggccgcga cttcggcgaa ttcatcccgg
     7261 ctggtcacca cgaccggttg atcgaattgg cgcgccgtca gccgccgggt tccggcatgg
     7321 agcgcatcca acggcgccag gctgcgccgc agctgactca ggctcaacac cagggccgcg
     7381 cccacggcca gggcgatgac caccgggaag gtgcgtttga agtcatccat cggcgcgatc
     7441 accgcagtcc gggcttcgct cacgaccaga gtccagagcg ggagggccag gcgatcgacg
     7501 tcggggaccg gcgcgaaagc cgccaggaac ggcacctcgt ctatttccca gtcgaaggtc
     7561 ccggtggtgt tgccgtcgaa gccggaacga accgactcgg gcagctcctg cagcagcacg
     7621 tccggctggg aaatcacccg agccgccgcg ttgaccacgt ggaactgcat ggtggggatc
     7681 agaggcgtcc gatcgacgcc gccccagagc cacgcgggat cgagctggcc gatgaaccat
     7741 ccggcgctgc cggtgcggcg gaccaggtag atcctcggcc ggcctcggac cacccgatcg
     7801 atgaccacgg cgcgccctgc cgccagttgc tgctggtctg cctcggtaag gacgggcacg
     7861 tctttgagcg ggccgaagag cccgattgga tgacccccgg tggggacgaa agccaaggcg
     7921 gtcagactat actccagcga accatcgcag gcagggtcgt cgatttccag tgtggtggga
     7981 ggacacggct gggaccgaac cgcgaggcgg ctcaggtcct gctggatgaa tctgagtcga
     8041 tcggtgatgt cattggcgag cagccggccg gaatgctcca accgctcgag actggcttgg
     8101 cgcagctgcc gagtgacggt tccgaatgag aggagcgcca gcgccaggga agggagcagc
     8161 gagcagacca cgaacaagag caacaggcgc ctgccgaaac ggctgcgcag caccgaaggc
     8221 gtgaggctcg agttggccat ccgttcgcgt ctcccgggcc cgatcccaac ctggtgaagc
     8281 tctacggcag agtatcggtc ccaaggagca agcgatatac caatcccaaa ggcccgtgcg
     8341 atcttgttgt cgg
//
LOCUS       DASWKS010000030         6691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_13722, whole genome shotgun sequence.
ACCESSION   DASWKS010000030 DASWKS010000000
VERSION     DASWKS010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13722"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VGA78_01070"
     CDS             <1..277
                     /locus_tag="VGA78_01070"
                     /inference="COORDINATES: protein motif:HMM:NF027432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4824 family protein"
                     /protein_id="HEX9892475.1"
                     /translation="RPALVVLERDTLLTVIDAGLDGDALEARYPDRSRFLILRALIGA
                     YYYSDPGTADGHVRSLLPPRLYLPPGSGREGPFRLHAGRLRLPFVTE"
     gene            350..2596
                     /locus_tag="VGA78_01075"
     CDS             350..2596
                     /locus_tag="VGA78_01075"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9892476.1"
                     /translation="MPERLRQALADRYSLRQEIGRGGMATVYLATDLRHDRPVAVKVL
                     RPDLAAVHGLPERFLREIRIAASLAHPNILPVHDSGELEGYLYFVMPYLGGESLRERI
                     TRTGQLPIEQALRITGAIASALDYAHRQRIVHRDVKPENILLVDGHPVVADFGIARAL
                     SDTKGERLTVLGMVIGTPAYMSPEQAAGEEVDGRSDQYSLACVAYEMLVGHPPFPGGS
                     ARATLARQIVEEPAPLKPERAAVPPAVEWAIMKALTKEPATRFASATEFADALTRAVP
                     ETLAAPVSVSGRDARAIAVLPFVNASPDPEDEYLSDGLTEELINALAQVEGLHVASRS
                     TVFARKGRVTDAREAGAALGATFLLDGVLRRSGQRLRITAQLTNALDGRLLWSARFDR
                     DAQEVFAVQEEIARTIVVTLRGTLLGDLSDPQPKRATDNARAYHLYLRGRHAWAARRG
                     PEGLAEAIRFFEQAIDEDPGFALAYTGLSDSYALVLDYRGVPVKEGMERAKAEARRAL
                     ALDESLAEAHTSLAWVLFIYDWDWTEAENEFRRAIELDPRYATARQWYAWLLIARGRV
                     EEALMQARLAVELDPPSVSIRRSLGWLYIMARQPEAAIAYLRRTVTLDPTAEETHRVL
                     GMAYLQKGMLEDARAAFEEALAMAPETAYAMAGLAATHAKAGRVDEVERLLAELDAIR
                     AQRYVSPVAYAMIHAARGDADQTFAWLEQAWTERRGWLTYLKAEPMLDPIRGDPRFGK
                     WLRRMKLD"
     gene            2743..3663
                     /locus_tag="VGA78_01080"
     CDS             2743..3663
                     /locus_tag="VGA78_01080"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9892477.1"
                     /translation="MRLHTQVMLLLVAGCARQEQPPAVDTLATTPAVAATREVVAEGF
                     STPESAIYDADQAVWFVTNINGVPSEKDGNGFISRLTRDGTIDSLHFVEGGRGGATLH
                     APKGQAITGDTLWVADIDAVRGFNKRTGAPLAAVEFGRRARFLNDIAVGPDGALYITD
                     TGIIIANGQIEHPGPDRLFRLAGRTITILAEGDRLERPNGIAWDNANRRFIMVGFGGK
                     TVFAWAPDSTPAAMAEGPGGHDGVVVLDDGRILVSSWADSTVFLAGKDRSSKTVTGVD
                     APADIGLDPSRRRIAIPLFNRNRVEFWTIP"
     gene            3682..4908
                     /locus_tag="VGA78_01085"
     CDS             3682..4908
                     /locus_tag="VGA78_01085"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9892478.1"
                     /translation="MLPLLSALLGLAIGGVVGLWLAPRLRRTGQSPPDESDQAARLTD
                     AGRRMAEVAHELNNPLSAILAFAQDLIQADPSPEQREALLMIQQQARRSRKLVRGLLE
                     EVRAVPAEGPRVSAGELVQRVAPIFERDAARSGISFAAGADPTLPPLEGDAGGLEQVL
                     TNLLQNAFQATPRGGKVTLITRVRGRLLEFVIEDNGPGIPAEDLPRIFDPFFTSKGPG
                     EGTGLGLSVSQTIVRRHRGTLVAENIPPWEGGGARFIVALPFLDRRQQDREAALEEPP
                     VDAAVGRRVLLIEDDDAVRQSMRRFLRRGGWLVSEAVEGRAGLELALRDRWDVIICDV
                     KLPGLSGIELYDRVVEVNPAQARRVVLVSGDTGSYDMVAFRERTDAVILEKPFELKIF
                     GETVERAAGIGPPGGS"
     gene            4905..5642
                     /locus_tag="VGA78_01090"
     CDS             4905..5642
                     /locus_tag="VGA78_01090"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9892479.1"
                     /translation="MIVLGYGLAVLIGITLGLLGGGGAILTVPVLVYVLGVGVRQAVP
                     MSLVVVGLTSLVGVLQHSRGRNVNGRALVAFAPAAIAGSVLGSMLALRVSARLQLTIF
                     AVVLLVAAGSMLWGARKAPAPPRAARPLSLLAGIGGGVGLLTGLVGVGGGFLYVPSLA
                     TLAGLDMKQAVGTSLALITVSCAAGVVGYLGRVPIDWRIVAGFSGLAFVGVGIGAALV
                     PKVSQATLRRWFAGLLLIMGVLVLIRR"
     gene            5684..>6691
                     /locus_tag="VGA78_01095"
     CDS             5684..>6691
                     /locus_tag="VGA78_01095"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9892480.1"
                     /translation="MLFQRFYDDSLAQTSYLIGCQTTGEAMVVDPNREVDQYIAAAEA
                     EGMRIGGVTETHIHADFVSGTRELAQRTGARMLLSAAGPEEWQYGFRSDPAVVLLQGG
                     ERIPLGRVVVEPVHTPGHTPEHLSFLVTDGAASREPLGILTGDFVFVGDVGRPDLLEK
                     AARVQGASEGSARDLFHSLQRFRQLPEHLQVWPGHGAGSACGKGIGAVPQSTVGYEKR
                     TNWALGIDDESSFVRQVLTGQPEPPRYFGVMKRINRDGPPILGGFPVPERIGEGRVAP
                     LLAGGAEVVDCRPAAAFGAGHIPGTINLPLNRSFATYAGSLLPYDRDLYFLVEGGPAA
                     IR"
BASE COUNT         1011 a         2188 c         2415 g         1077 t
ORIGIN      
        1 gcgtcccgcc ctggtggtgc tggagcggga cacgctgctg acggtgatcg atgccggtct
       61 ggatggcgac gccctggagg cccggtaccc cgaccggagc cggttcctca tcctgcgagc
      121 gttgatcggc gcctactact acagcgatcc cggcacggcc gacggtcacg tccgcagcct
      181 gctgccgccc cggttgtatc tcccacccgg ttccgggcgc gaaggtccct tccggctgca
      241 tgcggggcgg ctccgattgc ccttcgtcac cgagtaggcg ccaccagcac ccaacggcct
      301 atttttcagg gctatgaccg gagagtccag tctctctgcc ggagcggtgg tgcccgagcg
      361 cctgcggcag gcgttggccg atcgctattc gctgcgacag gaaatcggtc ggggcggcat
      421 ggccacggtc tatctcgcca ccgacctgcg gcacgaccgt cccgtcgcgg tcaaggtgct
      481 acgccccgat ctcgcagcgg tccacggcct accggagcga ttcctgcgcg agatccggat
      541 cgccgcgagc ctggcccatc cgaacatcct tccggtacac gactcgggcg agctggaggg
      601 ttacctctac ttcgtcatgc cctatctggg cggtgaatcc ctgcgggagc ggatcacccg
      661 gaccggccag cttcccatcg agcaggcgct ccggatcacg ggcgccatcg cttcggcgct
      721 ggactacgcc caccgccagc ggatcgtgca tcgcgacgtc aagccggaga acatcctgct
      781 ggtggatggt catccggtgg tggccgactt cggcatcgcc cgcgccctga gcgacaccaa
      841 gggcgaacgc ctgaccgtgt taggcatggt gatcggcacc ccggcctaca tgagcccgga
      901 gcaggcggcg ggcgaggagg tcgacggccg gagcgaccag tacagcctgg cctgtgtcgc
      961 ctacgagatg ctggtgggtc acccgccgtt ccccggcgga tcggcccggg ccaccctcgc
     1021 ccgccagatc gtggaggagc cggcgccgct caagccggag cgcgccgcgg tgccgcccgc
     1081 ggtcgagtgg gccatcatga aggcgctgac caaggagccc gccacccggt tcgcctcggc
     1141 caccgaattc gccgacgcgc tcacccgggc ggtcccggag acccttgccg caccggtttc
     1201 ggtttcgggc cgggatgccc gcgccatcgc ggtgctcccc ttcgtgaacg cgagccccga
     1261 tccggaagac gaatacctga gcgatggcct gaccgaagag ctgatcaacg ccctggcgca
     1321 ggtcgaaggg ctgcacgtgg cgtcccgcag caccgtgttc gcccggaaag gaagagtgac
     1381 cgacgcgcgg gaagcggggg ccgccctggg cgccaccttc ctgctcgacg gggtgctgcg
     1441 ccggtcgggc cagcggctcc gcatcacggc ccagctcacc aacgcgctgg atggccggct
     1501 gctctggtcg gcccgcttcg accgcgatgc ccaggaggtg ttcgcggtcc aggaggagat
     1561 cgcgcgcacc atcgtcgtga cgctccgggg aacgctgtta ggcgatctga gcgatcccca
     1621 gccgaaacgc gccaccgaca atgcgcgggc ctaccacctg tatctccggg gccgacacgc
     1681 ctgggcggcg cgccggggac cggagggcct ggccgaagcg atccggttct tcgagcaggc
     1741 aatcgacgag gatccgggct tcgcgctggc ctacaccggc ctgtccgaca gctacgcgct
     1801 ggtgctggac tatcgcgggg ttccggtcaa ggaaggaatg gagcgcgcca aggccgaggc
     1861 gcgccgggcg ctggccctgg atgagagcct ggccgaggcc catacctcgc tggcgtgggt
     1921 ccttttcatc tacgactggg actggaccga ggccgagaac gagttccgcc gcgccatcga
     1981 gctggatccc cgctacgcca cggctcggca gtggtatgcc tggctgctga tcgcgcgggg
     2041 ccgggtggag gaggccctga tgcaggcccg gctggcggtg gagctggatc caccctcggt
     2101 ctcgatccgc cgcagcctgg gatggttgta catcatggcc cgccagccgg aagctgccat
     2161 cgcctatctc cgccgcaccg tcacgctgga tccgaccgcc gaagagaccc accgggtgct
     2221 ggggatggcg tacctgcaga agggcatgct ggaggacgcc cgcgcggcgt tcgaagaggc
     2281 cctggccatg gcgcccgaga cggcctacgc gatggcgggc ctcgccgcga cccatgccaa
     2341 ggcgggtcgg gtggacgagg tcgagcggct gctggccgag ctggacgcga tcagggccca
     2401 gcgctacgtc tcgccggtgg cgtatgcgat gatccacgcg gcgcgaggcg acgccgatca
     2461 gactttcgcc tggttggaac aggcgtggac cgagcggcgc ggctggctca cgtatctcaa
     2521 ggccgagccg atgctcgacc cgatccgggg cgatccgcgg ttcggcaaat ggctgcggcg
     2581 gatgaagctc gactgaggcc tcaggaaacg gtagaccgtg aacggtgaac ggtgagcacg
     2641 gtgagcagtg agcagtaagc agtgagcagc gaacggtgaa aagtgagcag tgaatggtgc
     2701 gccgttcacg cctggccgga caacaacggt atggagcgga acatgcgact acacactcag
     2761 gtgatgcttc tcttggtagc ggggtgcgcc aggcaggagc agccgccggc ggtggatacg
     2821 ctggccacga ccccggcggt ggcggcgacc cgcgaggtcg tcgcggaggg attctcgacg
     2881 ccggagtcgg ccatttacga tgccgatcag gcagtctggt ttgtcaccaa catcaacggg
     2941 gttccatcgg agaaggacgg caacggcttc atcagccggc tcacccggga tggaaccatc
     3001 gattcgctgc acttcgtcga gggtggacgg ggcggtgcga ccctgcacgc gcccaaggga
     3061 caggccatca cgggcgacac cctttgggtg gcggacatcg acgcggtgcg gggcttcaac
     3121 aagcgcaccg gcgcgccgct tgcggccgtg gaattcggcc ggagggcccg cttcctcaac
     3181 gacatcgcgg tgggtccgga tggagcgctg tacatcaccg acaccggcat catcatcgcc
     3241 aacggccaga tcgagcatcc aggcccggac cggctcttcc ggctggcggg ccggacgatc
     3301 acgatcctgg ccgaaggcga tcggctggaa cggcctaacg ggatcgcgtg ggacaacgcc
     3361 aaccgccggt tcatcatggt cggattcggc ggcaagaccg tgttcgcctg ggcgccggac
     3421 tcgaccccgg ccgcgatggc cgaaggtccg ggcggtcatg acggcgtggt ggtgctggat
     3481 gacggccgga tcctggtgag cagctgggcc gactcgaccg tgttcctggc cggaaaggac
     3541 cgcagctcca agaccgtgac gggagtcgat gcgccggcgg acatcgggct ggatccgtcc
     3601 cggcggcgga tcgcgatccc gctcttcaat cggaaccggg tcgaattctg gaccataccg
     3661 taacagtact attctttccc catgcttccc ttgctgagcg cgttgttggg cctcgccatt
     3721 ggcggtgtgg tcggattgtg gctggcccct cgcctgcggc ggacggggca atcccctccc
     3781 gatgagtcgg atcaggccgc gcgcctcacg gacgcaggcc gccggatggc cgaggtggcc
     3841 cacgagctca acaacccgct ttccgccatt ctggcgttcg cgcaggacct gattcaagcc
     3901 gatccgtccc ccgagcaacg cgaggcgttg ctgatgatcc agcagcaggc ccgccggagc
     3961 cgcaagctgg tgcgtggcct gctcgaggaa gtgcgagcgg tgccggcgga ggggccgcgg
     4021 gtcagcgcgg gagagctggt ccagcgggtg gcgccgatct tcgaacgtga tgccgcccgc
     4081 agtggcatca gcttcgccgc cggcgccgac ccgaccctgc cgccgctgga gggcgatgcc
     4141 ggtggcctgg agcaggtgct gaccaatctg ctccagaacg ccttccaggc cacgccccgg
     4201 ggtgggaagg tgaccctcat cacccgggtc cgcggccggc tgctcgaatt tgtgatcgag
     4261 gacaacgggc cgggcattcc ggccgaggat ctcccccgca tcttcgatcc gttcttcacg
     4321 tccaagggtc ccggggaagg caccgggctc gggctttcgg tctcgcaaac catcgtgcgg
     4381 cggcatcggg ggacattggt ggcggagaac attccgccct gggaaggcgg cggggcccgg
     4441 ttcatcgtcg cgctgccgtt ccttgaccgg cggcaacagg atcgggaagc cgcgctcgag
     4501 gagccgcccg tggacgccgc cgtcggtcgg cgggtgctgc tgatcgaaga cgatgatgcc
     4561 gtgcgtcagt ccatgcgacg gtttctgcgt cggggcggat ggctggtcag cgaggcggtc
     4621 gaaggccggg ccggcttgga gttggcgctg cgggaccgat gggatgtgat catctgcgat
     4681 gtgaagctgc ccgggctatc cggtatcgag ctgtacgacc gggttgtcga agtgaacccc
     4741 gcccaggcca ggcgggtggt gctggtctcg ggcgataccg gcagctacga catggtggcc
     4801 tttcgcgaac ggaccgacgc cgtgatcctg gagaagcctt tcgagctcaa gatcttcggc
     4861 gaaacggtcg agcgggccgc gggtatcggg ccgccaggag gatcatgatc gtcctgggct
     4921 acggcctggc cgtcctcatc ggcatcacgc tcggcctcct gggtggcggt ggcgcgatcc
     4981 tcaccgtgcc ggtgctggtg tatgtgctgg gcgtcggcgt gaggcaggcg gtaccgatga
     5041 gcctcgtcgt cgtgggcctg accagtctgg ttggggtgct gcaacactcc cgcgggcgca
     5101 acgtgaacgg ccgcgccctg gtggcgttcg cgccggcggc gatcgcgggg tcggtgctgg
     5161 gctcgatgct ggcgctccgg gtcagcgcac ggctgcagct cacgattttc gcagtcgtcc
     5221 tgctggtcgc agcagggtcc atgctctggg gcgcccgaaa ggcaccggcc ccaccgcgcg
     5281 cggcccggcc cctgagtctc ctggccggca tcggcggcgg cgtcgggctg ctgaccggac
     5341 tggtcggcgt gggaggggga ttcctgtacg tgccttcgct agcgacgctg gccgggctcg
     5401 acatgaagca ggcggtcggt acctcgctgg ccctgattac cgtgagctgc gccgcggggg
     5461 tggtgggcta tctcggacgg gtgcccatcg actggcgaat cgtggcgggg ttcagcggcc
     5521 tggcgttcgt gggcgtgggg atcggcgccg cgctggtccc caaagtgtcg caggcgacgc
     5581 tgcggcgctg gttcgcgggg ttgttgctca ttatgggagt gttggtactg atccgacgtt
     5641 agcgttacga gccgcggctc gtgaccctcc accgagtgag agcatgctct tccagcgctt
     5701 ctacgacgac tcccttgccc agaccagcta tctgatcggg tgccagacga cgggcgaagc
     5761 catggtggtc gatcccaacc gcgaggtcga ccagtacatc gccgcggccg aagccgaagg
     5821 catgcggatc gggggggtca ccgaaaccca catccacgcc gacttcgtgt ccggcacccg
     5881 ggaactcgcg cagcggaccg gcgcacgcat gctgttgtcg gccgccggtc cggaggagtg
     5941 gcagtacggc ttccggtccg acccggcggt ggtcctgctg cagggcgggg aacgaatccc
     6001 gttgggcaga gtcgtggtgg agccggtcca cacgccgggc catacccccg agcacctcag
     6061 tttcctggtg accgacggcg cagccagccg cgagccgctc ggaatcctca cgggcgactt
     6121 cgtcttcgtg ggcgatgtgg gacggccgga cctgctggag aaggcggccc gggtccaggg
     6181 cgcgagcgag ggatcggccc gggacctttt tcacagtctg cagcggtttc gacagctgcc
     6241 cgagcacctg caggtctggc cgggtcacgg cgccggatcc gcctgcggca aggggatcgg
     6301 ggcggtgccg caatcgacgg tggggtacga gaaacgcacc aactgggcgc ttgggatcga
     6361 tgacgaatcg agcttcgtgc gacaggtgtt gacgggtcag ccggagccgc cgcgctactt
     6421 cggcgtcatg aagcggatca atcgggatgg gccgcccatc ctgggcggct tcccggttcc
     6481 ggagcggatc ggggaagggc gggtcgcgcc cctgctggcg ggaggcgccg aggtggtgga
     6541 ctgccggccg gcggcggcgt ttggggccgg ccatatcccc ggcacgatca accttccctt
     6601 gaaccgcagc ttcgccacgt acgccggatc gctgctcccc tacgatcgcg atctctattt
     6661 cctggttgag ggtggtcccg cggcaatccg g
//
LOCUS       DASWKS010000031         8621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2232032, whole genome shotgun sequence.
ACCESSION   DASWKS010000031 DASWKS010000000
VERSION     DASWKS010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2232032"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(272..1183)
                     /locus_tag="VGA78_01100"
     CDS             complement(272..1183)
                     /locus_tag="VGA78_01100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892481.1"
                     /translation="MRVLFSIALACTGVGGTLQAQATSELQQRASQAWFDKDWAKAAE
                     AYGALAGQTPNTALPHFRLGVSLINLGRAAEARSHLEAAERLGMPLPQVAFRLAQVAA
                     AAGDKDAAFGHLKRATDAGLALVPLPLDTDPAFMRLKGDARLDLFLTAVDRNARPCLD
                     DPKHAEFDFWLGDWEVRPRGQPSAPAASNVITKIHDGCVVLESYSAPGYTGQSFNIYD
                     RTRKQWNQTWVDKTGGLHVYWGVARDGNMYYEGEMPDPTAPSSRVKTRLTFFRMAADT
                     VRQFSESTRDEGKSWTVNYDLLYTRKR"
     gene            1313..2212
                     /locus_tag="VGA78_01105"
     CDS             1313..2212
                     /locus_tag="VGA78_01105"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9892482.1"
                     /translation="MASQAQMDFAYSLTDRLFRLSVGELSDFSGAKYDGDFSLPLEAA
                     QRRKHELIAEQLQVPAGGRILDLGCGWGAMLAFFRARDIAGVGVTLSQGQQRSCLGHG
                     LDVHLMDARAVTRDTFGGFDGVVSLGAFEHFCSIEEWQAGRQDAIYSEVFKNVAGMLP
                     SGGRFFLQTMVFGRNMIPYEEIDLGAPWLSNGHVLGLLQKTFPGSWLPYGAEQIERNA
                     EPHFRLVYQENGRNDYIETIRQWRMRFGRVTWRKLGLWASLLPRYLGSADFRHAFVSG
                     VSANTIAFERELMDHYRLVFERR"
     gene            2273..3139
                     /locus_tag="VGA78_01110"
     CDS             2273..3139
                     /locus_tag="VGA78_01110"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9892483.1"
                     /translation="MAALDTIVFETGSVRVGAFRCPAHDNRFRNTGPTQGHIVVFPRT
                     AVWIRHAGSRPFVADPGIVTIYNKGQEYTRAPLAADGDRSDWFGVSPEVAFALAHETD
                     PRTAQNPDRPYRVEWSVSDASLYLRQRTLFRRLESHEMAPLEAEQAVLELVAEVIRRA
                     HGPSAPRPAGRRARDAHRELAQRARAALAGNPAAPTDVTTLARTLQVSPFHLCRVFRA
                     VTGMTLHAYRLDLRLRLALERLADRVTDLSRLAFDLGFSSHSHFTHTFRTRLGFPPSA
                     FRPSRLETTASF"
     gene            3239..4393
                     /locus_tag="VGA78_01115"
     CDS             3239..4393
                     /locus_tag="VGA78_01115"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX9892484.1"
                     /translation="MMLRRMSLPRVVILGATVLGLLTSAQHFMVMQRSADDPTWRTVQ
                     HALNKEMPFWYLWALLAPIVVWVLRRVPLARGRLALAIPVHAAVAIACILLHGVMLLA
                     IYRLTGWPVPTGPFWQVYREGILFRITLGLLAYTILFGTVLAADYYDRFRERERAAAT
                     LSTQLAEARVQALRMQLNPHFLFNTLNTVSMLVRQQANSQAVRMLAGLSGILRYVLED
                     APPQEVTLRQEIDFIERYLAIEQSRFPDRLQVTVTAEPGTLEAMVPNLILQPLVENAI
                     RHGIARRAAAGQLQILAARRGARLELEVRDDGPGFDGGVDPVTPPGGVLVPGAGIGLP
                     NTIARLEQMYGPAGTLTLESPPAGGTIARVTLPFRLGTVESEVPDAVGAA"
     gene            4390..5160
                     /locus_tag="VGA78_01120"
     CDS             4390..5160
                     /locus_tag="VGA78_01120"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX9892485.1"
                     /translation="MNPLKVLVVDDEPVARAGITALLARESDVVVVGECGDGRSAASA
                     IQELHPDLVLLDVQMPELNGFEVIEAVGPRRMPPVVFVTAYDQFALKAFEVHALDYLL
                     KPFDDERFVEAIARVRRAIQQGRMGDLTSRLESLLQTDPPPGRYLDRIVVRKASGAVF
                     VPVDEIDWIEAADYCARIHSRGKVHVIRETMQRLEQRLDPNRFFRVHRSGIVNLDRVR
                     EMQPAPHGDHLLILQDGTKIRLSRGRKAALEERLGQPL"
     gene            complement(5220..6119)
                     /locus_tag="VGA78_01125"
     CDS             complement(5220..6119)
                     /locus_tag="VGA78_01125"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HEX9892486.1"
                     /translation="MRPFRLTPAALVWPAALLAGLGLTARALSAQPSLAARPIAATTA
                     QRLQGRGGLVIEVLVDSALLGGADVEVVEVTFPAGSAGGGHQHGGVEILYVLSGELEH
                     VVGQSAVRLTRGMAGVVRLGATVSHRVVSSEPVRALVIWVPGGELGRIRPAFTDQGRR
                     PLDRLDQDLSALSRLREQWTALYNRGDTVGLRPLYAGDAVRMPYDAGMQTGQAAIMEG
                     FVRSFAARPFAPRLQLTADQIHLSDDRAVERGRYHELMTPRQGRRLEETGKYVQLSRR
                     GGDGEWRIEWSIFNRDGPARAVP"
     gene            complement(6194..7267)
                     /locus_tag="VGA78_01130"
     CDS             complement(6194..7267)
                     /locus_tag="VGA78_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892487.1"
                     /translation="MVAESGVTRWALSGLLLATLALGDATRGVAQPATDTSLTALYAA
                     REKVWRDYFANGPDLAKTLPPGFLGIGAGDTAWADRASTLAGAKASAGRGTRLVALRF
                     PRNRVERHGDVAIIHSRYEAELETGAGRNTLRGNITEVFLWTGTGWTHPSWHMDYDRP
                     AASATASVTTPQRRLAAGDTAARREALAAYQAHQGEFDYLLGDWEFSGIRQRADGPVK
                     IRGYWSATRSADGALISDEFRMVDDSGRTIYVSTTLRVYDPVQQRWNLIGVEPGGGIP
                     QLGTAWKEGADMRIDQTFTSSDGTSRLWRIRYFNIGPDRFSWRADISSDGGVSWSENQ
                     MTMEGRRTGPARPPVALTPRRAN"
     gene            7481..8374
                     /locus_tag="VGA78_01135"
     CDS             7481..8374
                     /locus_tag="VGA78_01135"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX9892488.1"
                     /translation="MITNLLIATLLVASPDTVLVSAQWLQRHLSDPDLVVLQVGFDRI
                     AYDEGHIPGARFAPLDRFHNHTVADRLPDPQSMAAALGAVGVSNRSRVIISGDPLGAS
                     ILFVALEYLGMGDRTAVLDGGAAAWVASGGELSRKPVTITPATFTPKLREDLVVDAAA
                     VQRRLGQRGVTLLDGRSRAEYEGTARESLPRRGHLPGARHLDWLDTFDPRDVGSANGR
                     RGDNPPQAARLRPVAELERLFAGAGADRAGEVVTYCTVGMRASHLYFVARLLGYPVRI
                     YVGSMADWTTQPSRPVVAGAK"
BASE COUNT         1336 a         2939 c         2840 g         1506 t
ORIGIN      
        1 ttgttccaat ttaggaatca tcggcgcgcg cgaacagata ctttttcagc aacctgttag
       61 cggtttgacg ctttcgcgat tcagcgatta cgcccagctg gtttcgagtc aaccggccaa
      121 tcgctaaatc gaaccgacct ccttgatgcc cgtgccggag acaattgacg attcagcggt
      181 tccgcgattt ggcgattgct ggttgctgtt ggtgtgccga ttcgcgccag catcatcgct
      241 aaaccactaa ttcgataaat cgctaaatgg ttcagcgctt tcgagtgtac agcagatcat
      301 agttgaccgt ccagctcttc ccctcatccc gggttgactc ggagaactgc cgcaccgtat
      361 ccgccgccat ccggaagaag gtgagcctgg tcttgacccg agagctgggc gcggtggggt
      421 cgggcatctc gccctcgtaa tacatgttcc cgtcgcgagc cacaccccag tacacatgca
      481 acccgccggt tttgtcgacc caggtctggt tccactgctt ccgggtgcgg tcgtagatgt
      541 tgaagctctg gccggtgtag cccggggcac tgtagctctc cagcaccacg cagccatcgt
      601 ggatcttggt aatgacgttg gacgccgccg gcgccgacgg ctgcccccgg ggccggacct
      661 cccagtcacc cagccagaag tcgaactcgg cgtgcttggg atcgtctagg catggccggg
      721 cgttgcggtc gaccgcggtg aggaagagat cgagcctggc gtcgcccttg agccgcatga
      781 aggccggatc ggtgtcgagc ggcagcggga caagggccag ccctgcatcc gtggcccgct
      841 tgaggtgccc aaaggccgcg tccttgtcgc ccgcagccgc ggccacctgc gccaggcgaa
      901 aggcgacctg aggcaacggc atccccagtc gttcggcggc ctccaggtgg gaacgggcct
      961 cggcggcgcg gcccagattg atgagcgaca cccccagacg gaagtggggc agcgccgtgt
     1021 tgggcgtctg gcctgcgagg gcgccataag cctccgcggc cttggcccaa tccttgtcga
     1081 accaggcctg agaggcgcgt tgctgaagct cactcgtggc ctgggcctgg agagtgcccc
     1141 cgaccccggt gcacgccaag gcgatcgaaa aaaggacccg catggagact ccggagagac
     1201 cgttcggagt atcatgccca ggacccgtca cccccgacta tcaccggatt gcttgcgcgc
     1261 gtcgcaaccg gaaacttaga atccggctcc ggcgttccag attcggagac ttatggcgtc
     1321 ccaggcccaa atggacttcg cgtattcgct gaccgaccgg ctcttccggc tgagtgtggg
     1381 ggagctgtcc gacttcagcg gcgccaagta cgacggcgat ttctcgcttc ccctggaggc
     1441 ggcccaacgg cgcaagcatg agctgatcgc cgaacagctt caggtcccgg ccgggggcag
     1501 gattctggac ctcggctgtg gttggggggc gatgctggcc ttcttccggg cgcgggacat
     1561 cgccggagtc ggcgtgaccc tttcccaggg ccagcagcgc tcctgcctcg gtcacggact
     1621 cgacgtgcat ctcatggatg cccgcgcggt cactcgcgac accttcggcg ggttcgacgg
     1681 ggtcgtcagc ctgggggctt tcgagcactt ctgctccatc gaagagtggc aggccggccg
     1741 gcaggatgcg atttactcgg aggtgttcaa gaacgtcgcc gggatgctgc cttcgggggg
     1801 ccgtttcttc cttcagacca tggtcttcgg ccggaacatg atcccctatg aggagatcga
     1861 tctgggggcg ccctggctgt cgaacgggca cgtgctgggc ctgttgcaga agaccttccc
     1921 cgggtcctgg ttgccctatg gagcggaaca gatcgagcgc aacgccgagc cccacttccg
     1981 tctggtctac caggagaacg gccgcaacga ttacatcgag accattcggc agtggcggat
     2041 gcggttcggc cgggtcacct ggcgcaagtt agggctctgg gcttccctgc tgccgcgcta
     2101 cctcggcagc gccgatttcc ggcacgcctt cgtctccggt gtcagcgcca acaccatcgc
     2161 gttcgagcgg gagctgatgg accattaccg cctggtgttc gagcggcgct agcctggctg
     2221 tctcacccgc gaaaccggtc ttccatccgg agcgtcgggt cgagtacccg ctatggcagc
     2281 cctcgacacg atcgtctttg agaccggctc ggtccgggta ggggccttcc gctgtcccgc
     2341 ccacgacaac cgctttcgca acaccggacc gacccaaggg cacatcgtgg tctttccccg
     2401 gaccgcggtc tggatccgac acgccggctc ccggccgttt gtggccgatc ccgggatcgt
     2461 gaccatctat aacaagggcc aggaatacac ccgagctccg ctggcggcgg atggggaccg
     2521 gagcgactgg tttggcgtga gccccgaagt ggcgttcgcc ctcgcccacg aaaccgaccc
     2581 ccgcaccgcg cagaacccgg accggcctta ccgggtcgag tggtccgtgt cggatgcgag
     2641 tctctacctc cggcaacgca ccttgttccg gagactggaa tcccacgaga tggcgcccct
     2701 cgaagccgag caggcggtat tggagctggt ggccgaagtg atccggcgag cccacggccc
     2761 atcggcgccg agaccggctg ggcggcgggc ccgggacgcc catcgcgagc tggcccaacg
     2821 tgctcgggcc gctctggcgg gaaacccggc tgcccccacc gatgtcacga ccctggcacg
     2881 caccctccag gtgtccccct tccacctgtg ccgggttttc cgggctgtga ccgggatgac
     2941 gctccacgct taccggctgg acctcaggtt gcggttggcg ctggaacgtc tggccgaccg
     3001 ggtcaccgat ctctcccggc tggcattcga tctgggcttc tccagtcaca gccatttcac
     3061 ccacactttc cggacccgcc tggggttccc gccgtccgcg tttcggccgt cacggctgga
     3121 gacaactgcc tcgttctaac cgcggctggc cgggcggttg cggtggttcg ctgcgcggtg
     3181 gcgcgggttc gctgcaccgg ccgctggctc cccggcccga tcgcccttag ccttgaccat
     3241 gatgctccgc cggatgtccc tccctcgcgt cgtgattcta ggcgcgaccg ttctcggcct
     3301 gctgacttcg gcccagcatt tcatggtcat gcaacgttcg gcggatgacc ccacctggcg
     3361 gacggtccag cacgcgctca acaaggaaat gcccttctgg tatctctggg cgctgctggc
     3421 cccgatcgtg gtgtgggtgt tacggcgggt gcctctggcg cgggggcggc tggccctcgc
     3481 cattccggtg cacgcagcgg tggccatcgc ctgcattctg ctgcacggcg tgatgctgct
     3541 ggcgatctac cgactcaccg gctggccggt acccaccgga cccttctggc aggtgtaccg
     3601 cgaggggatc ctgttccgga tcacgctggg cctgctggcc tataccattc tgttcggaac
     3661 cgtgctcgcc gccgactact acgaccggtt ccgggagcgg gagcgcgccg cagccaccct
     3721 ctcgacccaa ttggccgagg cccgggtcca ggcgctccgg atgcagctca acccccactt
     3781 tctgttcaat acactcaaca ccgtgtcgat gctggtgagg caacaggcca acagtcaggc
     3841 ggtgcggatg ctggcgggcc tgagcgggat tctccgctac gtgctggagg atgctccccc
     3901 gcaggaggtc acgctccggc aggagatcga tttcatcgag cgctatctgg cgatcgagca
     3961 gagccgcttt cccgaccggc tgcaggtgac ggtcaccgcc gagcccggga cgctggaggc
     4021 gatggtgcct aacctgatcc tgcagccact ggtggagaac gccatccggc acgggatcgc
     4081 ccgtcgcgcc gccgccggac agctccagat cctggctgct cggcgcggcg cccggctcga
     4141 gctggaggtt cgggacgacg gtcccggttt cgacggtggt gttgatccgg taacaccccc
     4201 cggcggtgtg ctggtgccgg gagcgggaat cggtctcccc aacacgatcg cccggctgga
     4261 gcagatgtac ggcccggccg gaaccctgac gctggagagt cctcccgccg gcggaaccat
     4321 cgcccgggtc acgctgccgt tccgcctcgg gaccgtcgag tccgaggtcc cggatgccgt
     4381 gggggcggcg tgaatccgct caaggtgctg gtggtcgatg atgaaccggt ggcccgggcg
     4441 gggattaccg ccctgctggc gcgcgagtcc gacgtggtgg tggtcggcga atgcggagac
     4501 gggcgttcgg cggcctcggc gatccaggag ctccaccccg atctggtact gctcgacgtt
     4561 cagatgccgg agctcaacgg tttcgaggtg atcgaagcgg tgggcccgcg gcgcatgcca
     4621 ccggtcgtgt tcgtcaccgc ctacgatcag tttgccctca aggcgttcga agtgcacgcc
     4681 ctcgactacc tgctcaaacc cttcgacgac gaacggttcg tggaggccat cgcgcgggtc
     4741 cggcgcgcga ttcagcaggg acggatgggc gacctgacca gccggctgga gtcactgctc
     4801 cagaccgatc cgccccccgg gcgctatctc gaccgcatcg tggtgcggaa agcttcgggc
     4861 gccgtcttcg tgccggtgga cgaaatcgac tggatcgaag cggcggacta ttgcgcccgg
     4921 attcacagcc gaggcaaagt ccatgtgatc cgggagacca tgcagcggtt ggaacagcgg
     4981 ctcgatccca accggttctt ccgggtgcac cgctccggca tcgtgaacct cgaccgagtg
     5041 cgggagatgc agcccgctcc ccatggcgac catcttctga ttctccagga cgggaccaag
     5101 atccgtctca gccggggccg gaaggcggcc ctggaagagc ggttgggaca gcccttgtga
     5161 cgggcggaca ggcggcaggc ggtcggcggt cgggcggacc ggtgtggctc cggggcgcgt
     5221 tacggcacgg cccgggcggg gccgtcccgg ttgaagatgc tccactcgat gcgccattcg
     5281 ccgtcaccgc ctcggcgtga cagttggacg tacttcccgg tctcctccag ccgccggccc
     5341 tgccgcggag tcatgagctc gtgataccgc cctcgctcca cggcgcggtc atccgacaag
     5401 tggatctgat cggcggtgag ctggagcctc ggcgcaaacg gtcgagcggc aaagctgcgc
     5461 acgaaaccct ccatgatcgc cgcctgtccg gtttgcattc ctgcatcgta cggcatgcgc
     5521 accgcgtccc cggcgtaaag cggtcgcagg ccgaccgtgt caccgcggtt gtagagggcg
     5581 gtccattgct ctctcagccg ggacagcgcg ctcaggtcct ggtccaggcg gtcgagcggc
     5641 cgccggccct ggtccgtgaa cgccggtcgg attcgcccga gctcgccgcc cggcacccag
     5701 atcaccaggg cgcgcaccgg ctccgacgat acaaccctgt gactgaccgt cgctcccagg
     5761 cgcaccacac cggccatccc ccgggtgagc cgcacggccg actggcccac cacgtgctcc
     5821 agctcgccgc tcagcacgta gaggatctcc acgcctccat gctggtgccc gccgccggcc
     5881 gacccggccg ggaaggtgac ctcgaccact tccacgtcgg cgccaccgag cagagcggag
     5941 tcgaccagga cctcgatcac cagtccaccc cgtccctgca gccgttgcgc cgtggtggcg
     6001 gctatcggcc tcgcggccag ggaaggctgg gcggagagag cccgggctgt gaggccaaga
     6061 ccggccagaa gcgcggcagg ccagaccagg gctgccgggg tgagacggaa gggtcgcatg
     6121 cagggtagac tccgtggttc acccctgcga cgctaccaga aacttgcgcg agatctagcg
     6181 ccttaagccc ctctcagttc gcccgccggg gcgtcagagc gaccggcggg cgggccggac
     6241 ccgtccggcg tccctccatg gtcatctggt tctcgctcca ggaaacccct ccgtcggacg
     6301 aaatgtcggc ccgccacgag aaacgatccg gaccgatgtt gaagtagcgg attcgccaca
     6361 agcggctcgt gccgtcactc gaggtaaagg tctggtcgat ccgcatgtca gcgccttcct
     6421 tccaggccgt tccgagctgg gggatgccgc cgccgggctc gacgccgatc aggttccaac
     6481 gctgctgaac cgggtcatag acccgcaggg tggtgctcac gtagatcgtc cggccactgt
     6541 catcgaccat gcgaaactca tcactgatga gggccccatc ggccgagcga gtggcgctcc
     6601 aatacccgcg aatcttcacc gggccatcgg cccgctgccg gatgccgctg aactcccagt
     6661 cacccaggag gtagtcgaat tccccctggt gggcctggta ggcggcgagc gcctcacggc
     6721 gggcggcggt gtccccggcc gcaagacggc gttggggtgt ggtgaccgac gccgtggctg
     6781 acgccgccgg ccggtcatag tccatgtgcc agctgggatg ggtccagccg gttccggtcc
     6841 acaggaatac ttcggtgatg ttcccgcgga gtgtgtttcg tccggcaccg gtttccagct
     6901 ccgcctcgta gcgggagtga atgatggcca cgtctccatg gcgctccact cggttccgcg
     6961 gaaagcggag cgccaccaac ctggtgcccc gacccgccga tgctttcgcc ccggccaacg
     7021 tgctggcccg gtcggcccaa gccgtatccc ccgctccgat ccccagaaaa cccggcggca
     7081 gggtcttcgc caggtcaggc ccgttggcga agtaatcgcg ccagactttc tcccgcgccg
     7141 cgtagagcgc cgtgagtgag gtatccgttg cgggctgcgc cacgccccgg gtggcatcac
     7201 cgagcgccag cgtcgcgagc aggagaccgg acaacgccca ccgggtcaca ccagactcag
     7261 ccaccattcc gtcctcctgg ctctgatctc gccggacccg ctggtggctc cggcgtgacg
     7321 ggcacgatgc cactgcccgg gtcacaatgg atgatcgtgg agtacgggag ttgtacgaga
     7381 attgtcagcg acagccagcc gttccagcca ttcactgcac tggaacgcag ttggctgcac
     7441 tggacgtggg aggaggcgcc actcccccgt agtgatgttc atgatcacca acctcctgat
     7501 tgcgaccctc ctggtcgctt cccccgatac ggtgctggtg tcggcccagt ggctccagcg
     7561 gcatctgtcc gatcccgatc tggtcgtgct gcaggtcggc ttcgaccgca tcgcctacga
     7621 cgaaggtcac atccccggtg cccgcttcgc gccgctggac cggtttcaca atcacacagt
     7681 ggccgaccga ctccccgacc cccagtccat ggccgccgca ctcggtgccg tgggggtttc
     7741 gaatcgatcg cgggtgatca tctcgggcga tccgctggga gcatccattc tgtttgtcgc
     7801 gctcgagtac ctggggatgg gcgatcggac cgcggtgctc gacggtgggg ccgccgcctg
     7861 ggtcgcgagc ggcggggagc tatcccgcaa accggtgacc atcactcccg cgaccttcac
     7921 cccgaagctg cgggaggacc tggtagtgga cgcggccgcg gtccagcgcc gcctgggcca
     7981 gaggggcgtc accctgctgg acggtcgttc ccgggcggag tacgagggga ccgcgcggga
     8041 atcgctgccc cggcggggcc acctgcccgg tgcccggcat ctcgactggc tcgacacctt
     8101 cgatccgcgt gatgtgggga gcgccaacgg gcgccgtggg gataacccgc cccaggccgc
     8161 ccggctccgg ccagtggcgg agctggagcg gctcttcgcc ggggccggcg cggaccgggc
     8221 cggcgaagtc gtgacctact gcaccgtcgg catgcgggcc agtcacctgt atttcgtcgc
     8281 ccggctgctg ggatacccgg tccggatcta tgtgggctcc atggccgact ggaccaccca
     8341 gccctcccgg ccggtggtgg cgggagcgaa atgagacttc ggcggccggt gccgctcgac
     8401 tggtgggccg tggtgatcgc ctcgatggcc atcgctggat aggtttctga agaggatact
     8461 cccatgctca caatcctgct ctcgctggcc gcctcgaccc tggcgccgca acagagtacc
     8521 ccgctgctgg ttacgaccga ctggctggca tcccacctga aggacccgaa gctggtgctg
     8581 ttccacatcg ggacccagcc ggcctatcag gcgggacaca t
//
LOCUS       DASWKS010000032         3241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1490618, whole genome shotgun sequence.
ACCESSION   DASWKS010000032 DASWKS010000000
VERSION     DASWKS010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490618"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VGA78_01140"
     CDS             complement(<1..312)
                     /locus_tag="VGA78_01140"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9892489.1"
                     /translation="MLSDGLDAATRALVTLAAAVAVGREPLIEEQSRAAVAADVPAVW
                     IDELLLQSVLMVGWPRALVAAGIWRRESGARAPAADPSLTEDSEQWRRRGEATCGVVY
                     GT"
     gene            complement(343..1359)
                     /locus_tag="VGA78_01145"
     CDS             complement(343..1359)
                     /locus_tag="VGA78_01145"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX9892490.1"
                     /translation="MPELRVEVLRGGQVESVHRVSAAVVDRSGRLIGSAGDPRFVTYW
                     RSAAKPFQALPLVEDGVLSRLSLGSDVLALACASHSSEPRHLQLTDRILDRIGCTEAD
                     LACGPHPPLGPGVVQDVVAHRTVLTPRWSNCSGKHAGMLALARHHGWDIAGYELAGHP
                     VQERILDSVVRWTGRDRNAIVLGVDGCTTVCFGLPLLAMARAYAALAAAASESLSVIR
                     HAMLAHPELVAGEGRFCTDLMRALPGEVVAKVGAEGIHCAAIPSAGIGIALKVEDGDM
                     RASPPALLSILQALAPRLPGPARLRSDALPDWAHRPVYDTRGGRVGEIRGSGTLHFLD
                     DPVR"
     gene            1419..2456
                     /locus_tag="VGA78_01150"
     CDS             1419..2456
                     /locus_tag="VGA78_01150"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX9892491.1"
                     /translation="MTASPSFGISRERILQLASRARGRRIVVVGDVMLDRYVLGETER
                     LSPEAPVPVVHVRETRAALGGAGNVAANVKAIGADVRLVGVVGDDPHGLSIRAELAAQ
                     QLLDGNLLTVAGRATTTKTRIVARGQQIVRIDEEVESLLEGTDVDRLTALVIQSLDGA
                     DALLLEDYNKGALAPGLIRPVIEEARKRGVPVVVDPKFRQFFDYGGATVFKPNRRELE
                     AALGAAVDLESPDALPDALSRLRVDNLLLTLGPAGMVLVTKDRTVTRIPSLAREVFDV
                     SGAGDTVTAWVGTMLAAGASLKEAALLATYAAGIEVGKAGVATVTPEEVLSVHEQQYD
                     RLGLLRRGGAI"
     gene            2749..3096
                     /locus_tag="VGA78_01155"
     CDS             2749..3096
                     /locus_tag="VGA78_01155"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9892492.1"
                     /translation="MKIERELIRGAGPVAVLQLLKRREMYGYELAEALSRRTEGVLAM
                     GQSTLYPLLYSLEAKKLVASRWVETPSGRKRRYYRLTSQGAALLGQRRAQWRELFEAM
                     IDIGVVAPAPRGG"
BASE COUNT          535 a         1099 c         1119 g          488 t
ORIGIN      
        1 ggtcccgtac accacgccgc aggtagcctc acctcgtcgg cgccactgct cgctgtcctc
       61 ggtcagggac ggatccgccg ccggcgcccg cgctccgctc tcgcggcgcc agatgccggc
      121 ggccaccagg gcccggggcc agcccaccat caacaccgac tgcaacagca gctcgtcgat
      181 ccacaccgcc ggcacgtcgg ctgccaccgc ggctcggctc tgctcctcga tcagcggctc
      241 ccggccgacg gccacggcgg cggcgagcgt gaccagtgcg cgggtagcgg cgtcgagccc
      301 gtcactcaac atggcggttt ccggttggcc tgggggcacc aatcacctca ccgggtcgtc
      361 gagaaaatgc agcgtgccgg aaccgcggat ctctcccacc cgcccacccc gggtgtcgta
      421 caccggacga tgggcccaat ccggcagggc atcgctccgg agccgggcgg gcccgggaag
      481 ccgcggggcg agggcctgaa gaatcgagag cagcgcggga ggcgaggcgc gcatgtcacc
      541 gtcttccacc ttgagggcga tcccgattcc cgccgacgga atggcggcac agtgaatccc
      601 ctcggcgccg accttcgcca ctacctcgcc cggcagcgcc cgcatcaggt cggtgcagaa
      661 gcggccttct ccggccacca gctcgggatg ggccagcatg gcgtggcgaa tcacgctcag
      721 gctctcgctg gctgccgcgg ccagagccgc gtaggcccgg gccatggcga ggagaggaag
      781 accgaagcag accgtggtgc atccatcgac ccccaggacg atggcgtttc ggtccctgcc
      841 ggtccatcgc accaccgagt cgagaatccg ttcctggacc gggtgcccag ccagctcgta
      901 tccggcgatg tcccatccat gatggcgggc cagggccagc atcccggcgt gttttcccga
      961 gcaattgctc cagcggggcg tgagcacggt tcgatgggcg acaacgtcct gcaccacgcc
     1021 aggaccgagc ggcgggtgcg gtccgcaggc gagatcggct tcggtgcatc cgatccggtc
     1081 gaggatccga tcggtcagct ggaggtgacg cggctcgctg gaatgggagg cgcaggcgag
     1141 cgccagcacg tcggacccca gactcaggcg cgacagcacg ccatcctcta ccagcggcag
     1201 ggcctggaac ggcttggcgg ccgagcgcca gtacgtgacg aaacggggat caccggccga
     1261 cccgatcagg cggccggacc gatccacgac ggcggccgaa acccggtgca ccgactcgac
     1321 ctgtccgccg cgcaggacct cgactcgaag ctctggcata gcggcgaggg aaaatagcag
     1381 gcttgcaccg gaggcggcgg tcccgcacct tctgccgcat gacagccagt ccgagctttg
     1441 ggatcagccg ggaacggatt cttcagctgg cgagccgagc gcggggccgc cgcatcgtgg
     1501 tggtgggcga cgtaatgctc gaccgctacg tgctgggaga aaccgagcgg ctctcccccg
     1561 aagcgccggt gcccgtggtc cacgtgcggg agacccgcgc ggccttgggc ggcgccggca
     1621 atgtcgccgc caacgtcaag gcgatcggcg ccgacgtgcg gctggtgggc gtggtgggcg
     1681 atgatcccca tgggttgtcg atccgggccg agcttgccgc gcagcagctg ctcgatggca
     1741 atctcctcac cgtggcgggg cgggccacca ccaccaagac ccggatcgtg gcccgggggc
     1801 agcagatcgt ccggatcgac gaagaagtcg aatctctgct ggaaggcacc gacgtcgacc
     1861 ggctgaccgc cctggtcatc cagtcgctcg acggggccga tgcgctgctg ctggaggact
     1921 acaacaaggg tgcgctcgcg cccggtctga tccgcccggt gatcgaggag gcgcgcaagc
     1981 gcggagtgcc ggtcgtggtg gatcccaagt tccgccagtt cttcgactac ggcggggcca
     2041 cggtgttcaa gcccaaccgg cgggagttgg aggccgcgct gggagccgca gtggacctgg
     2101 agagccccga tgccctgccc gacgcgctga gccggctcag agtggacaac ctgctgctga
     2161 ccctgggccc ggcggggatg gtgctggtca ccaaggaccg caccgtgacg cggattccca
     2221 gtctggcccg cgaagtgttc gacgtctcgg gcgcggggga caccgtgacc gcctgggtcg
     2281 gcaccatgct cgcggccggg gcttcgctca aggaggccgc gctgctggcg acctacgcgg
     2341 cgggcatcga agtcggcaag gccggcgtgg cgacggtgac gccggaggaa gtcctgtcgg
     2401 tgcacgaaca acagtacgat cggttgggat tgttgcggcg gggcggcgca atctaatcgc
     2461 cgccgaccgc gcgagttctg actgccaaaa acagcggcaa aaggcatcca cggattacac
     2521 cgataacacg gatttcaaac taccaacaac aacacagttt ttttatggcg attctttcct
     2581 cggctggtcc aatccgtgta atccgtgtca tccgtggatc ccttttcgct gttggtcagg
     2641 ggttgtcgtt ctgggaagcg ctcgagcaga tgctgggcta tcgggttttg cgatctcgtc
     2701 ctgccccaca tactattgac agcgaggtat ccctagcgag gaaacagcgt gaagatcgaa
     2761 cgcgagctca tccggggcgc cggcccggtc gcggtgctcc agctgctcaa acggcgcgag
     2821 atgtacggct atgagctggc cgaggcgctc tcccgccgga ccgagggtgt gctggcgatg
     2881 ggccaatcca cgttgtatcc cctgctctac agtctggaag ccaaaaagtt ggtcgcgagc
     2941 cgctgggtcg agaccccctc cggccgcaag cgccgctact accggctcac ctcacagggc
     3001 gccgccctgc tcggccagcg ccgggcccag tggcgggagc tgttcgaggc catgatcgat
     3061 atcggtgtcg tggcgccggc tccccgggga gggtgagcca tgcccccgca cgatgactcg
     3121 ctctcgggcc ggctcgatcg tctcgcagtc gcgcgactcg ctcgcgccga aggactgccg
     3181 gagatcctgg cggaacatgt cgccggcctg gtaaccgcca cgggcctgcc ggaagaccgt
     3241 c
//
LOCUS       DASWKS010000033        17519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_384936, whole genome shotgun sequence.
ACCESSION   DASWKS010000033 DASWKS010000000
VERSION     DASWKS010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17519
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384936"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..1180)
                     /locus_tag="VGA78_01160"
     CDS             complement(209..1180)
                     /locus_tag="VGA78_01160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HEX9892493.1"
                     /translation="MTLPIAILLVVLGLAILAGGGELLVRGAVAIAALAGLTPAVIGL
                     TVVAMGTSLPELVVSVVAGLEHQPDIAIGNVVGSNIFNLTFIAGLTAMVASLPIRGNV
                     VRLEWPVMFAASLGFLVSARDGLIDRVEAGVFLIVLVGFVGYSIRIARVDAMPAEVRD
                     LSDQAAARALHPRHKELLLSVLAVVAGLLLLIIGGRMLVAGSVRIAQLAGLSERVIGL
                     TIVAAGTSAPEVATTLVAAARRQTDVAIANLIGSNIFNLLGILGVAGLILPIPVSPAI
                     FRGDVWWMLGTSALIYPLMLGGMKLSRKEGALLFGAYLLYVGLLLRG"
     gene            complement(1329..2693)
                     /locus_tag="VGA78_01165"
     CDS             complement(1329..2693)
                     /locus_tag="VGA78_01165"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX9892494.1"
                     /translation="MHRLLLLILLVVPPPPAAWSQQPERPFGTLQEQSQRQQSWLARR
                     LETVLPVMMRKYGIDMWVIPMREYNEDPTFTSLVSPTTFAARRRTVYVFFDRGPAAGV
                     ERLALGGSSQGGLYQAYRSQRAVSAPAGVGGRTAELWGDQQWLVLKEVIEARKPARIA
                     INTSRTWAFADGLSSGELDGMRKLLGEPWTSRFVPAEGLAVDFIASRLPEEEVFYREL
                     QQLVWTLVGEMFSERVVTPGVTRTSDLVWWWRQRVNDLGLGTWFQPSVSAQRRGATAE
                     QLGDDPVIQRGDLLWCDVGITALRLNTDTQHNAYVLREGEAEPPAGLVRALRNANQLQ
                     DLLFQEIRPGRTGNEVLAATLGRMKAAGLDGTMYSHPIGMHGHGAGTLIGLWDYQEGV
                     PGRGDHAIIPGMWYSSELQVTSPVPEWGGQRVRIAQEEDFGIGSDGKPGWFKGRQTDF
                     WIVK"
     gene            complement(2701..3219)
                     /locus_tag="VGA78_01170"
     CDS             complement(2701..3219)
                     /locus_tag="VGA78_01170"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9892495.1"
                     /translation="MRYLMFAAALVAMARPALAQQYVPKDVLVSDFQRQKVILMRYID
                     IMPDDRLSFAPTPGVRTFAGQIAHIAQMTGGMLARIARHGTQPHGDSGVYLRNKSALK
                     DYVARNYDFAIAGVQSLRPVQMVTISDLYDLKWPNFKWVLAVQEHAAWILGATALYLR
                     LNGQQAPEYLPF"
     gene            3321..4799
                     /locus_tag="VGA78_01175"
     CDS             3321..4799
                     /locus_tag="VGA78_01175"
                     /inference="COORDINATES: protein motif:HMM:NF014135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX9892496.1"
                     /translation="MLFAGQEGVLRSTTDPLSQGLVAAIIVLVFVVLALEKAHRVLVI
                     FSAVAALWLITYLTPFKLITFEGAKTAIDLNVLFLLAAMMAAVGVLKTTGVFEWAVGR
                     LLQQAGGRPIVIQALIAWFTGILSAFADNVTTVIFVTPMALEMARLTGVRPLAYLLPM
                     VMAANIGGTATLIGDPPNIMIGSGANLSFLDFIYDLSVPVLWMMLLLEFFSRRWYRAD
                     FASAIAMGGSFPQPEVQDPQLLRWSLGITGGIFIGFFTHSWTGMPVAVPAVIGAAAIL
                     IVQDVLYLRRHRPSHAERVHGLLEVIEKEIEWPTLSFFAFLFIAVGAAVDTGLIDTMA
                     TGLAWLIGTGQASFGLSAQGTLLFGALMICWASGVLSALIDNIPFVAVAIPIVARLTG
                     TLEGNTEVLWWALSLGACLGGNGSAIGASANVTTIGLSERGGTRISFAEFTRFGAIVA
                     ALTLLVASLFLGGYVYLGDQRVFRLGLGGLAVIAIARAVLRR"
     gene            complement(4845..5324)
                     /locus_tag="VGA78_01180"
     CDS             complement(4845..5324)
                     /locus_tag="VGA78_01180"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892497.1"
                     /translation="MNFLKLPALLAVVAAGPAEAQTAAERDEVLQPIVQLFDGMRKRD
                     SAMVRAAFAPQARLGGAQERNGQVSIHFITPDDFARVVGSQPAPPWDERIYDPEVRID
                     GRLATVWVKYDFLAGDKWSHCGIDAFQLARLPEGWRITQLGDTRQTTGCTTPAAPKN"
     gene            complement(5435..6148)
                     /locus_tag="VGA78_01185"
     CDS             complement(5435..6148)
                     /locus_tag="VGA78_01185"
                     /inference="COORDINATES: protein motif:HMM:TIGR03008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAAX prenyl protease-related protein"
                     /protein_id="HEX9892498.1"
                     /translation="MSSGEPSGENPPAGRPSVRPSVHLPWVLPFAAFMALLAIMPLLD
                     LDPALDQALRILIVGGLLLTVSRPVVDLRVKRWFGSIALGGVVFLIWIGPDLVWPGWH
                     DGLLFSNDIVGRPESSLPEAARTSRLALGLRFTRAAALIPIVEELFWRGWLPRVAIRS
                     DFHQVPLGTFTPAGFWITALLFATEHGSWWDVGLAAGVLYNWWMMRTRSLGDCILAHA
                     VTNACLSIYVMAAGRWEYW"
     gene            complement(6202..9084)
                     /locus_tag="VGA78_01190"
     CDS             complement(6202..9084)
                     /locus_tag="VGA78_01190"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9892499.1"
                     /translation="MPYSRWNVLAVWLFALPVGPLTAQTGVAGRVSDSASQQPLFNAL
                     VTARAAAGGPAHGSTSTGATGRYRLTLSPGSYTVEVAAIGYQARSRQVTVSAGAVATL
                     DVALTESAIQLVPIVVSATRGVPEKQTDAPAAVAVVSQTEVEERPALTVADHLRALPA
                     VDVSQGGLTQSNIVARGFNNIFSGATLMLVDNRYAAVPSLRVNVPAFFSATNQDIEQI
                     EFVLGPGAALYGPNSAKGVLAITTKSPFSSRGTTLTLETGLRSDSRDPDGNGFANDGH
                     ALWRAGLRHAGTVGDKFGYKISGEYLKGEEWRLRDPAEPTALPAPGRPPIPGLEPGTC
                     NTETGCRDFDLEKYNLDARIDILPSERTQIIAAAGTVNAGSVIEYTGIGAAQARDWRY
                     SFGQLRFRYDRLFVQGFANFSNAGDTFLFRDGNPIEDNSRVWGAQVQHGLEIGDRETL
                     LYGLDYTYTDARTNGTINGRNEADDTIKEFGAYVHSTTRLASPLDLVLAFRLDTHNRL
                     KDPDGSGDVNLSPRAALVWRPAEDQTLRFTYNRAFSTPSNNNLFLDIVAGGLPGTPFN
                     VRALGVPEAGFHFRGYCGEGGVGNGLCMRSPWPGAPATAIPAQAAPFWPVAREAVIAR
                     LPQNLPPELQPLIPGITAAMRSMTPPTPAQVTTALRSLDPTALVFNPVNPDAVTDIDP
                     IRVEISNVLEAGYQGVINHRLRLAGNLWYESKKDFVGPLIVESPNVFLDLATTAAYYQ
                     NSPQWQAFLASVTPLIGPQNAAALTQAIVAGMAGLPGSTTAPGVPLGTVVPDSPLNQN
                     ADLFLTYRNFGDVNLWGADLAFDYLFTDRVSLSGTWSWVSDDFFSADEVEGPTDIALN
                     ASSHKFSLNGRYREGITGFSADLGLKYTKGFPINSGVYVTPLGTDGSREPLPSWTTVD
                     VLAAYRFKFGLLAALSVQNLFNENYATFAGIPQLGRMVMTKLQYEF"
     gene            complement(9225..10550)
                     /locus_tag="VGA78_01195"
     CDS             complement(9225..10550)
                     /locus_tag="VGA78_01195"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9892500.1"
                     /translation="MLQFAVESKRARGRAARYITAVLTALLPTTSVAQSPSVVLLRPD
                     RVWDGIADQTRTGWVVMVQGNRIVTVGPAAAIQPPPHVTIIELPGTTLLPGLVDAHSH
                     LLLHPYNETSWDDQVLHESLGLRVARATVHARQTLLAGFTTLRDLGTEGAGYADVGLR
                     TAIEQQVIPGPRLIVTTRAIVATGSYGPKGFAPEASTPLLGAETADGLDGVTRVVRDQ
                     ISHGADWIKVYADYRWGPNDEARPTFTLDELTRMVEVARSSGRAVVAHASTPEGMRRA
                     ILAGVETIEHGDGGTPEVFRLMRERGVALCPTLAAGHAIQQYRGWRPSRDPEPASVRA
                     KRESFAAALAAGVTLCNGSDVGVFAHGDNARELELLVAYGARPLDALRAATSVNGRVL
                     HLEDRIGQVKPGLLADLIAVEGDPLQDIGALRKVRFVMKDGMIYRNGEQ"
     gene            10624..11520
                     /locus_tag="VGA78_01200"
     CDS             10624..11520
                     /locus_tag="VGA78_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892501.1"
                     /translation="MLLALAAAGCQGGGTGMAARIPSDSTEYYRTQTQQLSTISAQKD
                     SLLTELSETTKLITDVSGELATIRTDTRNAPVVAGEGARVDERAEVLAKVRALVSRVR
                     QSEARLAAARRRVDALTGTSDSLRTALTAYANTITELQGVVESQKATIATLNEQVTAL
                     TGQVTTLSDEKRVLTDTVSTMTERENEIFYVVGTKKELADRGVITQEGGTRFLVFTRT
                     GETLAPARVLDPQQFTRADKRTLSEIALPKADKEYRIVSRHDLAYAEADQMANGKFRG
                     TLRITSPQQFWSASKYLIVVEN"
     gene            11674..12180
                     /gene="sixA"
                     /locus_tag="VGA78_01205"
     CDS             11674..12180
                     /gene="sixA"
                     /locus_tag="VGA78_01205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0101006 - protein histidine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HEX9892502.1"
                     /translation="MRLLIIRHAIAEDREEWAKSGKPDGERPLTAKGMKRMQAAAGGL
                     SRLVETPETIGTSPLVRAAQTAEIVAEVLGDVKVKPVEALSPSADFADLVAWLRSLKT
                     NGTVAVVGHEPHLSGLACYLLTGRRESFLELKKGAACLIQLSEPPTPGVARLLWSLSP
                     GQLRSIAD"
     gene            complement(12274..13083)
                     /locus_tag="VGA78_01210"
     CDS             complement(12274..13083)
                     /locus_tag="VGA78_01210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEX9892503.1"
                     /translation="MTWPGRPEPLDDDEALPADAPGTDWEPAGDEEESEFLTGPRSRL
                     KELLRVTRIAAEFVKGFRALHFVGPCVTVFGSARFRETHPYYQLARTMGERLAGLGLT
                     VMTGGGPGIMEAANRGAKEAGGHSIGCNIELPAEQHENRYLDRFVTFRYFFVRKVMLV
                     KYSVAFVVLPGGFGTLDELFEALTLVQTKKIEMFPVVLMGVGYWSRLLDFMRSTLVRN
                     RTIDLQDANLLTVTDSPEVAVSAIQEGVKRYGILWPTPPKRRKLLKEKALP"
     gene            13147..14865
                     /locus_tag="VGA78_01215"
     CDS             13147..14865
                     /locus_tag="VGA78_01215"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9892504.1"
                     /translation="MTDGLRSELETALGSAYDIGRELIGGGMSHVYVATERALGRKVV
                     VKVLPPDLAAGVNRDRFQREIKLAAQLQHPHIVPLLSAGEHGRLLWYTMPYIEGESLR
                     TQIDRRGQLPVREVVRIITDVAEALTFAHGRGVIHRDIKPGNVLLQGGHALVTDFGVA
                     KALSAALPTGAGTSTGMAIGTPSYMAPEQLASDPSADHRVDIYALGLLAYELLAGASP
                     FEGPSPRETMAAQLTRVPPPLDSSNPEVTPALAALVSNCLQKDPAQRPGAAEEVVRRL
                     EALSSGAISARSSPRRRVGLVGLLTTGAVLAAAVLFFRSDEVTDPLVDGDTTAAARPD
                     TVVVREAVPVPLSREDSLEIARAVESRRAASGAPSWSQAQVESLQIQLQRAMAESLSR
                     ALAQLQHQPAPRSAQPEGRDREPAWTLDTARNPATVFINPGSRPDAPPSGPPVAIVFP
                     VHVSGPVEPSFMAALGPVRDSLLRIVRGVKGLEVVNLDSLTRLMNRRGSQVAIQLRNS
                     IQVIGVFSARADSMVLRIDLRPPGWPVRGRVIRVESPAVPRDQPLAAVEAIASKLDAF
                     LRRAVP"
     gene            complement(14935..>17519)
                     /gene="ligD"
                     /locus_tag="VGA78_01220"
     CDS             complement(14935..>17519)
                     /gene="ligD"
                     /locus_tag="VGA78_01220"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX9892505.1"
                     /translation="LHSAIRILHSTPPFLPDNLLFVMPPDDPPDNLLKAYRAKRDAER
                     TPEPSGVVGREPGRLYVMHKHAATRMHWDLRLELEGTLKSWAVPKGPSFDQADKRLAV
                     HVEDHPIEYGDFEGIIPEGNYGAGAVIVWDRGTWEPIEDPVAGMEKGKLLFELHGHKL
                     KGRWTLVKIKKSEKDWLLIKERDGLMTAGGREVPEESVLSGRTVEELRDGRDLATPIR
                     TELDRLKAARRSVRVDDVDIMHAETVEAPFTRDGWLFELKLDGYRILAELTEGRVRLV
                     TRRGNEANGSFPEIVRAVSALPYRHIILDGEVVATDEQGRPSFQRLQQRARFLRPTEI
                     RRATLENPVTFYAFDFLAFEDRDLRGLPLTERKRLLRELLPPAGQVHYLDHFEREGEQ
                     LFAQVEKMGLEGLVAKRADSVYQGGRSPHWLKVRVDRTDDFVVVGFTAPRGSRTGLGA
                     LHLADYVNGLLTYAGRAGSGFKEKELAQLRSELERARRPTPPCEGPVPTGSDTFWVEP
                     ELVCEVRYKEWTDEALLRQPVFLRFRDDKTPEECIRREPEQLEELETPVGADPPAAVD
                     RKVAFSNLDKVFWPDEGYTKGDLIEYYRAIGPWLLPFLRNRPVVLTRYPDGIAGKSFF
                     QKDAPGFTPEWLRTERVWSEDTQREISYFVAEDEPSLLYLANSGSIPLHIWLSSVGSL
                     ELPDWCVLDLDPKEAPFSDVVKVALVLHELCDEVGLPHFVKTSGSSGIHVLVPMNRQL
                     TYEQSRSFGELLSQVVVSRARDIATVVRAIQRRDGKVYLDYVQNGYGRLLVAPFSVRP
                     LPGAPVSMPLRWDEVNQSLNPKAFTIKSAPDRMRQRGDPMAGLLEAKADLMKALERLE
                     KLGR"
BASE COUNT         2911 a         5877 c         5784 g         2947 t
ORIGIN      
        1 atttcgtggc ctctcgttcc tgaatggtca gtgaccgggt gtccgcgcga ggggtcgcgc
       61 ctgggggagg gcgatcacga cgctcctggt tttcccggag gcgccggagg taatctggct
      121 cgtcagacat ggacattctc ccggcagcag gccgttggcg acaggcgctt acgatagtcg
      181 gcctttcgcc cggtcggaag ccccagcgtc agccgcggag cagcaatccg acatacagca
      241 gataggcacc gaacaggagc gcgccttcct tccgggagag cttcatcccc cccagcatca
      301 gcggatagat cagggccgag gtgcccagca tccaccagac atcgccccgg aaaatggccg
      361 gggacaccgg gatcggcagg atcaggccgg ccacgcccag aatccccagc agattgaaga
      421 tgttggagcc gatcagattg gcgatcgcga cgtcggtctg acgccgagcc gcggccacca
      481 gtgtcgtggc cacctcgggg gcgctggtgc ccgccgccac gatggtcagt ccgatcactc
      541 gttcgctgag cccggccaat tgcgcgatcc gcaccgaacc ggccaccagc atccggccgc
      601 caatgatcag cagaagcagt ccggcgacga cggcaagcac cgacagcagc agctccttgt
      661 gccgggggtg aagggctcgt gccgcggcct ggtccgagag atccctgact tcggccggca
      721 tggcgtcgac ccgggcaatc cggatgctgt accccacgaa gccgaccagc acgatgagga
      781 acactcccgc ttcgacccgg tcgatcagac catcccgcgc gctcaccagg aaccccagac
      841 tcgcggcaaa catgaccggc cattccagcc ggaccacatt gccccggatc gggaggctgg
      901 ccaccatcgc ggtgaggccc gcgatgaacg tgaggttgaa gatgttggac ccgacgacgt
      961 tgccgatcgc gatatcgggc tggtgctcga gccccgcgac cacgctcacc accagctccg
     1021 gcagtgacgt ccccatggcc actacagtga gtccgatcac tgccggcgtg agccccgcca
     1081 gagccgcgat ggccaccgcg ccgcggacca gcagttcccc accgccagcc aggatggcca
     1141 gcccgagcac aaccaggagg atggcgatgg gaagggtcat ggaagaggtg ggcgggagga
     1201 atgaatgcag agtgcccaat gccgaatgcc cacagcagaa ggagggcctt cgtggttgtt
     1261 tcccctctgc actgggcatt gggcattggg cactctccgg ttcattccac ccttccccct
     1321 cctccctctc acttcacaat ccaaaaatcg gtttgccgtc ccttgaacca ccccggtttg
     1381 ccatcggagc cgatgccgaa atcttcctcc tgagcgatcc gcacccgctg gccgccccac
     1441 tccggcaccg ggctggtcac ctggagctcg ctcgaatacc acatgccggg gatgatggcg
     1501 tggtctcccc gccccgggac cccttcctga tagtcccaca ggccgatcag ggttccggcg
     1561 ccgtgcccat gcatgccgat gggatggctg tacatcgtcc cgtccaggcc cgccgccttc
     1621 atgcgaccca gcgttgcggc caggacttcg ttgccggtgc gtcccgggcg gatttcctgg
     1681 aacagaaggt cctgcagctg gttggcattg cggagagccc ggaccagtcc ggctggtggt
     1741 tcggcttctc cttcgcgcag cacataggcg ttgtgctggg tatccgtgtt gagccgcaga
     1801 gcagtgatac ccacgtcgca ccagagcagg tcaccccgct ggatcaccgg atcgtcgccc
     1861 agttgttcgg cggtggcgcc gcggcgctga gcgctcaccg aaggctggaa ccaggtgcct
     1921 aacccgagat cgttcacccg ctgccgccac caccacacca ggtcgctggt acgcgtcacc
     1981 cccggggtga cgacccgctc cgaaaacatc tctcccacca gcgtccagac cagctgctgc
     2041 aactcccggt agaagacctc ctcctccggc agccgcgacg cgatgaaatc caccgccagg
     2101 ccctcggcgg gcacgaagcg ggaggtccac ggctcaccca gcagttttcg catgccgtcc
     2161 agctcgcccg aggataggcc gtcggcaaag gcccaggtgc gggaggtgtt gatggcgatc
     2221 cgggccggct tccgggcctc gatgacctcc ttgagcacca gccactgctg gtcgccccag
     2281 agctcggcgg tacgccctcc aaccccggcc ggggcgctca cggcccgctg gctgcgatag
     2341 gcctggtaca agccaccctg gctgctgccg cccagggcga gccgttccac ccctgcggcc
     2401 ggcccgcgat cgaagaagac gtagacggtg cggcggcggg ctgcgaaggt ggtgggggac
     2461 accagggagg tgaaggtggg atcctcgttg tattcccgca tcgggatcac ccacatgtcg
     2521 atcccgtatt tccgcatcat cacgggaagc acggtctcca gccgtcgggc gagccaggat
     2581 tgctgtcgct gggactgctc ctggagggtg ccgaagggcc gctccggttg ctgcgaccag
     2641 gcggccggcg gcggagggac aaccagcaga atcaggagga ggagacggtg cacgaggcgc
     2701 tcagaagggg aggtattcag gggcttgctg gccgttcagg cgtaagtaga gggcggtggc
     2761 ccccagaatc caggccgcgt gctcctggac cgccagaacc catttgaagt tgggccattt
     2821 gagatcgtac aggtcggaga tggtgaccat ctggaccggc cggagcgact gcacccccgc
     2881 gatggcgaag tcgtagttgc gggcgacgta atccttgagg gccgatttgt tccggagata
     2941 aaccccggaa tcgccgtggg gctgggtccc gtgtcgggcg atccgggcga gcatcccacc
     3001 ggtcatctgg gcgatgtggg cgatctggcc ggcgaaggtc cgcacccccg gggtgggcgc
     3061 gaacgagagc ctgtcgtccg gcatgatgtc aatgtagcgc atcaggatga ccttctggcg
     3121 ctgaaaatcg gagaccagca cgtccttggg gacatactgc tgggccaggg ccggccgggc
     3181 catggctacg agtgcggcgg cgaacatcag gtagcgcacg aaaccctcga actgcttgga
     3241 gcctattgac gattgacgat gaaccgctga cgattgtggt gcgctaatcg tcaatccttc
     3301 atccccaatc gtcaatcccg atgctgtttg cgggtcaaga gggtgtcctt cgctccacca
     3361 ccgaccctct atcccagggt ctggtcgccg ccatcatcgt cctggtgttc gtggtgctgg
     3421 ccctggagaa ggcccaccgg gtcctggtga tcttctcggc ggtggccgcc ctctggctga
     3481 tcacctacct cacgcccttc aagctcatca ccttcgaggg cgccaagacc gccatcgatc
     3541 tgaacgtcct cttcctgctg gcggccatga tggcggccgt gggcgtgctc aagaccacgg
     3601 gcgtcttcga gtgggccgtc ggccgcctgc tgcagcaggc cgggggacgc ccgatcgtca
     3661 tccaggccct gatcgcctgg tttaccggga tcctgtcggc cttcgccgac aacgtcacca
     3721 cagtcatttt cgtgaccccg atggcgctgg aaatggcgcg gctgaccggg gtccgccccc
     3781 tggcctatct gctgcccatg gtgatggccg ccaacattgg gggcaccgcc accttgatcg
     3841 gcgatccccc caacatcatg atcgggtcgg gggccaacct ctccttcctg gacttcatct
     3901 acgacctgag cgtaccggtc ctgtggatga tgttgctgct cgagttcttc tcccgccgct
     3961 ggtaccgggc cgacttcgcc tcggccatcg caatgggcgg gagcttcccc caaccggagg
     4021 tccaggaccc ccaattgctg cgctggagtc tgggcatcac gggagggatc ttcatcggct
     4081 ttttcaccca ttcctggacc gggatgccgg tggcggtgcc tgcggtcatc ggcgccgccg
     4141 cgatcctgat cgtccaggat gtgctctatc tccggcgcca ccggccttcc cacgcggaac
     4201 gggtgcacgg actgctggaa gtgatcgaga aggaaatcga gtggcccacg ctgtcgttct
     4261 tcgccttcct cttcatcgcc gtgggcgccg cggtcgatac cgggctcatc gacacgatgg
     4321 cgaccggcct ggcctggctc atcggaaccg gtcaagcctc gttcgggctc tcagcccagg
     4381 ggacattgct gttcggggcg ctgatgatct gctgggccag cggggtgctc tcggccttga
     4441 tcgataatat tcccttcgtc gcggtcgcca tccccatcgt cgcccgcttg accggcactc
     4501 tggagggaaa cacggaggtc ctgtggtggg ccctgtcgct tggcgcctgc ctcggcggca
     4561 acggcagtgc catcggggcc tccgccaatg tgaccaccat cgggctgtcg gaacggggcg
     4621 gcacccggat cagcttcgcc gagttcaccc gtttcggcgc gatcgtcgcc gccctcacgc
     4681 tgctggtcgc ctctctcttc ctgggcggct acgtctacct gggcgaccag cgggtctttc
     4741 ggctggggtt gggaggattg gcggtgatcg cgattgcccg ggcggtgctg aggagatagg
     4801 accgaggact gagtggcggt cactcagtcc tcagcactca gtccctagtt tttgggcgcc
     4861 gccggtgtgg tgcagccggt ggtctgcctg gtgtcgccca gttgggtgat tctccaccct
     4921 tcgggcagcc gggccagttg gaacgcgtca atgccgcagt gactccactt gtcgccggcc
     4981 aggaaatcgt acttcaccca cacggtcgcc aggcgaccgt cgatccggac ctccggatca
     5041 tagatccgct catcccaggg cggcgccggc tggctgccga ccacccgggc gaagtcgtcg
     5101 ggtgtgatga agtggatgct gacctggccg ttgcgttcct gggccccgcc caaccgggcc
     5161 tgcggggcaa aggccgcccg caccatcgcg gagtctcgtt tccgcatgcc atcgaaaagc
     5221 tggacgatgg gctggagcac ttcgtcgcgc tccgcggcgg tctgggcttc tgccggccct
     5281 gcagcaacca cggcgagcag cgccggcaac ttgaggaagt tcacgatcaa gtctcgattg
     5341 gaggttgaga gacccttcga ctggtgacga ggcagagttt cagcccgcac caactcagta
     5401 cttcgcccct aagtccttag ccctgagtcc ttgcttacca gtactcccac cgtcccgccg
     5461 ccatcacata gatggagagg caggcgttgg tgacggcgtg cgccaggata cagtcaccca
     5521 ggcttcgggt tcgcatcatc caccagttgt agagcacccc cgcggccaac ccgacatccc
     5581 accaggaccc gtgctcggtg gcaaagagca gcgccgtgat ccagaacccg gccggggtga
     5641 aagtcccgag cggcacctgg tggaagtcgg accggatcgc gacccgcggc agccagccgc
     5701 gccagaacaa ctcttccacg atcgggatca acgccgcggc ccgggtgaac cggagcccga
     5761 gggccaggcg gctggtgcgg gcggcttcgg gcaggctcga ttcgggccgg cccacgatgt
     5821 cgttgctgaa gagcaggccg tcgtgccagc ccggccacac cagatcgggc ccgatccaga
     5881 tcagaaacac cacgccaccc agcgcgatgc tgccgaacca ccgcttgacg cgcagatcga
     5941 ctaccggccg ggagaccgtg agcaggaggc cccccacgat caggatccgg agggcctggt
     6001 ccagcgccgg atccaggtcc agcagcggca tgatggccag cagcgccatg aatgccgcga
     6061 aggggagaac ccacggaagg tggacggacg gacggaccga cggacggccg gccggtgggt
     6121 tttcgcccga cggttctccc gagctcatgg cgtaacggac cgtcggtccg tcagtccgtc
     6181 tgtccgtggt ccgcccgacc gtcagaattc gtactgcagc ttggtcatca ccatccggcc
     6241 cagctgcggg atcccggcaa aggtcgcgta gttctcgttg aaaagattct gcacgctcaa
     6301 tgccgccagc aagccgaact tgaagcggta ggccgccagg acatccacgg tagtccagct
     6361 gggcaacggc tcgcgactgc cgtcggtccc gagcggcgtg acgtagaccc cggagttgat
     6421 cgggaagccc ttggtgtact tgaggcccag gtccgccgag aacccggtga tcccttcgcg
     6481 ataccgcccg ttgagcgaga acttgtgaga gctggcattc aaggcgatgt cggtgggacc
     6541 ctcgacctcg tcggcgctga agaaatcatc gctgacccag gaccaggtcc ccgagagcga
     6601 gacccggtcg gtgaagagat agtcgaaggc caggtcggcg ccccacagat tcacgtcgcc
     6661 gaagtttcgg taggtcagga agagatccgc gttctggttg agcgggctgt cgggcaccac
     6721 ggtcccgagc ggcacccccg gcgcggtggt gctgcccggc agaccggcca tgccggccac
     6781 gatggcctgg gtgagcgcgg ccgcgttctg gggaccgatg agcggcgtca ccgaagccag
     6841 gaacgcctgc cactgcgggc tgttctggta gtaggcggcg gtggtggcca gatcgaggaa
     6901 gacgttgggc gattccacga tcagcggccc gacgaagtct ttcttggact cgtaccagag
     6961 attgccggcc agccgcagcc ggtggttgat cactccctga tacccggctt ccagcacgtt
     7021 gctgatctcg acccggatgg gatcgatgtc ggtgaccgcg tcgggattca ccgggttgaa
     7081 gaccagcgcg gtcggatcga gggaccggag ggcggtggtg acctgggccg gggtgggcgg
     7141 ggtcatcgac cgcattgccg cggtgattcc ggggatcagc ggttgcagct cgggcggcag
     7201 gttctgcggc agccgggcga tgaccgcctc gcgggcgacc ggccagaagg gcgcggcctg
     7261 ggccggaatc gcggtggccg gcgcgccggg ccagggtgag cgcatgcaga gtccgttgcc
     7321 cacaccgccc tcgccgcagt agccccggaa gtggaatcca gcttccggca cgcccagcgc
     7381 tcgcacgttg aacggcgtcc ctggcagccc gccggccacg atatcgagga acaggttgtt
     7441 gttgctgggg gtggagaagg cccggttgta ggtgaaccgc agggtctgat cctcggccgg
     7501 gcgccatacc agcgccgccc ggggcgacag gttcacgtcg cccgagccgt ccggatcctt
     7561 gaggcgattg tgggtatcga gccggaacgc caggaccaga tccagtgggg aagccagtcg
     7621 ggtggtgctg tgcacgtaag ccccgaactc cttgatggta tcgtcggctt cgttgcggcc
     7681 gttgatggtc ccgttggtcc gggcgtcggt gtaggtgtag tccagaccgt acagcagcgt
     7741 ctcccggtcg ccaatctcca ggccatgctg gacctgtgcc ccccagaccc gcgagttgtc
     7801 ctcgatcgga ttgccatccc ggaagaggaa ggtgtccccc gcgttactga agttggcgaa
     7861 gccctgcacg aagagccggt cataccggaa ccggagctgc ccgaagctgt agcgccagtc
     7921 gcgggcctgg gccgccccga tgccggtgta ctcgatcacg ctgccggcgt tcaccgtgcc
     7981 ggccgccgcg atgatctggg tccgttccga cggcaggatg tcgatccgcg cgtcgagatt
     8041 gtacttctcg agatcgaagt cccggcagcc ggtctcggtg ttgcaggtac cgggctccag
     8101 ccccggaatg ggcggccggc ccggagccgg cagcgcggtg ggttcggccg gatcccgaag
     8161 gcgccattcc tcccccttca ggtactcccc cgagatcttg tagccgaatt tgtcgcccac
     8221 ggttccggcg tgcctgagcc cggcccgcca caacgcgtgc ccatcgttgg cgaagccatt
     8281 gccgtccggg tcgcgcgaat cgctgcggag gccggtctcc agcgtcagcg tagtgccccg
     8341 ggagctgaag ggggacttgg tcgtgatcgc caggaccccc ttggcggagt tgggcccgta
     8401 gagggcggcg cccggcccca gcacgaattc gatctgctcg atgtcctggt tggtcgccga
     8461 gaaaaatgcc gggacgttca cccggagcga ggggacggcg gcgtaacggt tgtccaccag
     8521 catcagggtc gcgccggaga agatgttgtt gaagccccgc gccacgatgt tggactgggt
     8581 cagcccgccc tgcgaaacgt ccaccgccgg aagggcccgc aggtggtccg ccaccgtcag
     8641 cgcggggcgt tcctccacct cggtttgcga caccacggcc accgccgcgg gcgcgtcggt
     8701 ctgcttctcg gggacgcccc gggtagcgga cacgacgatc ggcaccagct ggatggcgga
     8761 ttcggtcagc gccacatcca gcgtggcgac cgccccggcg ctgaccgtca cctgccggct
     8821 ccgggcctga tatccgatag cggccacttc caccgtgtag ctaccgggtg acagcgtcag
     8881 ccgatagcgg ccggtcgcac cggtgctggt gctgccgtgc gccgggccac cagccgcggc
     8941 ccgggcggtg accagcgcgt tgaagagcgg ctgctgcgag gcgctgtcgc tgacccggcc
     9001 ggcgacgccg gtctgggccg tgagcggacc aaccggaagg gcgaacaacc acacggcgag
     9061 cacgttccac cggctgtaag gcatgcggaa ccctcgggag agcggtagtc gggctggggt
     9121 gacgatgggt tcaatacacc gtccccaggg aggcttgtca agaaaccagg gacggtgaac
     9181 ggtgaacggt gaacggtcaa cggtcaacgg ttcacgtcca ctggtcattg ttcaccgttc
     9241 cggtagatca ttccgtcctt catcacgaac cggactttcc tgagtgcgcc gatatcctgg
     9301 agcggatcgc cttccaccgc gatcagatcg gccagcagtc ccggtttcac ctgcccgatc
     9361 cggtcttcca ggtgcagcac ccggccgttg accgacgtgg ccgcccgcaa ggcatcgagg
     9421 ggccgggcgc cgtaggcgac cagcagctcc agctcgcggg cgttgtcgcc gtgggcgaag
     9481 acccccacgt cgctgccgtt gcagagcgtc accccggcgg cgagcgccgc cgcgaagctc
     9541 tcccgcttgg cgcggacgga agccggttcg ggatcgcgcg aaggccgcca gccgcggtat
     9601 tgctgaatcg cgtgccccgc cgcgagcgtg ggacatagcg ccacgccccg ctcgcgcatc
     9661 aggcgaaata cctccggcgt gccaccgtcg ccgtgctcga tggtctcgac ccccgccagg
     9721 atcgcacgcc gcatcccttc cggggtcgac gcgtgggcca ccaccgcgcg gccggacgag
     9781 cgagccacct ccaccatgcg ggtaagctca tcgagggtga aggtgggacg ggcctcatcg
     9841 ttcgggcccc agcggtagtc ggcgtacacc ttgatccagt ccgctccgtg gctgatctgg
     9901 tcccgcacca cgcgggtcac tccgtccagg ccgtccgcgg tttcggcccc aagcaggggg
     9961 gtgctcgctt ccggtgcgaa gcctttgggc ccgtaggagc cggtcgccac gattgcgcgg
    10021 gtggtcacga tcaaacgggg accgggaatc acctgttgct cgatcgcagt tcggagaccg
    10081 acatcggcgt acccggcgcc ttcggtgccc agatcgcgca aagtggtgaa cccagccaac
    10141 aaagtctgcc tagcatgtac ggtcgcacga gccacacgca acccgagtga ctcgtgcaga
    10201 acctgatcgt cccaactggt ctcgttgtag gggtgcaaaa gcagatgact gtgtgcgtct
    10261 actaagccag gaagtaatgt agttcccggc agctcaatga tggtaacatg aggcggtggt
    10321 tggatcgccg ccgcagggcc gaccgtcacg atacggttgc cttgaaccat caccacccag
    10381 ccggttcgtg tttgatctgc gatgccgtcc caaacgcggt cgggacggag cagtaccacc
    10441 gagggcgact gcgccaccga tgtcgtgggc agtagggccg tgaggacggc agtgatgtac
    10501 cgggctgcac gaccgcgcgc gcgtttgctc tcaaccgcga attggagcat gtttatgagc
    10561 cccttcccca cccatgtccc aggagtgctg atgtcccgtt tcacccgttc tacgggtagt
    10621 ctcgtgctgc ttgctctggc cgccgccggt tgtcagggcg gtggcacggg gatggccgcg
    10681 cgaattccgt ctgattcgac cgagtattat cgaacccaga cgcagcagct gtccaccatc
    10741 tcggctcaga aggacagtct cctcaccgag ctgtccgaaa ccaccaagct catcaccgac
    10801 gtgagcggtg agctggccac catccggacc gacacgcgta acgcgccggt cgtggccggt
    10861 gaaggcgccc gggtggatga gcgggccgag gtgctggcca aggtgcgggc gctggtgagc
    10921 cgggtccggc agtccgaggc tcgtctggcc gcggcccgcc gccgggtgga tgccctcacc
    10981 ggcaccagcg acagccttcg caccgcgttg accgcctatg ccaacaccat caccgagctg
    11041 cagggtgtgg tggagtccca gaaggccacc atcgccacgc tcaacgagca ggtcacggcg
    11101 ctgaccggcc aggtcaccac cctgtccgat gagaagcggg tcctcaccga caccgtctct
    11161 acgatgaccg agcgggagaa tgagatcttc tacgtcgtcg gcaccaagaa ggagctggcg
    11221 gaccgcggcg tcatcactca ggaaggcggc acccggttcc tggtcttcac ccgcaccggt
    11281 gagaccctgg ccccggcccg cgtgctcgac ccgcagcagt tcaccagggc cgacaagcgg
    11341 accctgtcgg agatcgcgct gcccaaggcc gacaaggagt atcgcatcgt gtcgcggcac
    11401 gacctggcct atgccgaagc cgatcagatg gccaacggca agttccgcgg cactctgagg
    11461 atcacgtcgc cgcagcagtt ctggtcggcg tcgaagtacc tgatcgtggt ggagaactaa
    11521 cggtcgaagt tggtcgaagg tagtcgaggg cggtcgaagg gggttggggc gtcggtcccg
    11581 gcccccttcc ctttttcacc gttttcgact ctcttcgacc cacttcgacc cacttcgacc
    11641 cacttcgacc acttcgaccc acttcgaccc cctatgcgcc tcctgatcat ccgccacgcc
    11701 atcgccgaag accgtgagga atgggccaag agcggcaagc cggacggcga acgccccctg
    11761 accgccaagg gtatgaaacg tatgcaggcg gcggccggcg gtctgtcacg cctggtggaa
    11821 acccccgaga cgatcggcac cagccccctg gtgcgggcgg cccagacggc ggagatcgtg
    11881 gccgaggtgc tgggtgacgt caaggtcaag ccggtcgagg ccctgtcccc cagtgccgac
    11941 ttcgccgacc tggtcgcctg gctgcggagc ctcaagacca acgggacggt cgcggtcgtg
    12001 ggccatgagc cgcatttgag cgggctggcc tgttatctcc tgaccggccg gcgggagagc
    12061 ttcctcgagc tcaagaaggg cgcggcctgc ctgatccagc tctcggagcc cccgaccccg
    12121 ggggtggccc ggctgctctg gagcctgtca ccggggcagc tgcggtccat tgccgattga
    12181 cgattgacga ttgacaatta cgtgggtcgg cgttctggag cgcccgatga gcagttgtcg
    12241 atcgtcaatc ggcaatcggc aatcgtcaat gggtcacggc agcgccttct ccttgagcag
    12301 ctttctccgc ttcggcggcg tcggccacaa aatcccgtag cgtttgacgc cctcctgaat
    12361 cgcggacacc gcgacctcgg gtgaatccgt gaccgtcagc aggttggcgt cctgcaggtc
    12421 gatggtccgg ttgcgcacca gcgtgctgcg catgaaatcc agcagccggg accagtatcc
    12481 cacccccatc agcaccaccg ggaacatctc gatcttcttg gtctgcacca gggtcagcgc
    12541 ctcgaacagc tcgtccaggg taccaaagcc tcccggcagg accacgaacg ccacgctgta
    12601 tttcaccagc atcaccttgc ggacgaagaa gtatcggaag gtgacgaagc gatcgagata
    12661 gcgattctcg tgctgttccg ccgggagctc gatgttgcag ccgatcgaat ggccaccggc
    12721 ctccttggca ccccggttgg cggcctccat gatcccggga ccgccacccg tcatcaccgt
    12781 gaggcccaga ccggcgagcc gttcccccat ggtgcgggcg agctggtagt agggatgggt
    12841 ctcccgaaat cgggcggaac cgaacacggt cacacacggc cccacgaagt gcagcgcgcg
    12901 gaatcccttc acgaactcgg ccgcgatccg ggtgacccgc agcagctcct tgagccgcga
    12961 acgcgggccg gtgaggaatt ccgactcttc ctcgtcgccg gcgggttccc aatcggttcc
    13021 gggcgcgtcg gccggaaggg cttcatcgtc gtccagcggc tcgggtctgc cgggccaggt
    13081 catgcgaatc ctcggaaagc tgcggcggat gactgatcgg cctgaggaag atactttgcc
    13141 tctatcatga ccgacgggct tcggagcgaa ctcgagacgg cgctgggctc ggcctacgac
    13201 atcggccggg agttgatcgg cggcggcatg agccacgtgt acgtggccac cgagcgcgcc
    13261 ctgggccgga aggtggtggt gaaggttctg ccccccgatc tcgccgcggg ggtcaaccgg
    13321 gaccggttcc agcgcgagat caagctggcc gcccagctcc agcaccccca catcgtcccg
    13381 ctgctgtcgg ccggcgaaca cggccggctg ctgtggtaca ccatgccgta catcgaaggc
    13441 gagtcgctcc ggacccagat cgaccgccgt ggccagctac cggttcgcga ggtggtccgg
    13501 atcatcaccg acgtggcgga agccctgacg ttcgcgcacg gccgcggggt cattcaccgc
    13561 gacatcaagc ctggaaacgt gctgctgcag ggcggccacg ccctggtcac tgatttcggg
    13621 gtcgccaagg ccttgagcgc cgccctgccg accggggccg gcacctccac cggcatggcc
    13681 atcggcacgc cgagctacat ggcgccggaa cagctcgcgt ccgatcccag cgccgaccac
    13741 cgggtcgaca tctacgcgct gggattgctg gcctacgagc tcctggccgg cgcctctccc
    13801 ttcgagggtc cttcgccccg cgaaaccatg gcggcccaac tcacccgggt accgccgccg
    13861 ctcgactcca gtaaccccga ggtcacgccg gcactggccg ccctggtgag caactgcctc
    13921 cagaaggacc cggcgcaacg gcctggtgcg gccgaggagg tggtccgccg gttggaggct
    13981 ttgagctcgg gtgccatctc ggcccgttcc agcccccgtc gccgagtcgg cctggtcggc
    14041 ctgttgacca ccggcgcagt gctcgcggct gcggtgctgt tcttccggtc agatgaggtc
    14101 accgatccgc tggtcgacgg ggacacgacc gcggcagcga gaccggatac cgtggtagtc
    14161 cgtgaggcgg tgccggtccc gctgagccgg gaggactcgc tcgagatcgc cagggcggtg
    14221 gagagccgcc gggcagcgag tggcgcgccg tcctggagtc aggcgcaggt ggaatcattg
    14281 cagatccaac tgcagcgagc catggccgaa tcgctctcgc gtgccctggc gcaactgcaa
    14341 caccaaccgg cgccccgctc ggcccagccg gagggccgag atcgcgagcc ggcctggacc
    14401 ctcgataccg cccgaaaccc cgcgaccgtg ttcatcaacc cgggatcacg gccggacgct
    14461 cccccttctg gcccgccggt ggcgatcgtc tttcccgtcc acgtgagcgg tccggtcgag
    14521 ccatccttca tggccgcgct cggtccggta cgcgacagcc tgcttcggat tgtgcgcggg
    14581 gtgaaggggc tggaggtggt caatctggac agtctgaccc gcctgatgaa ccggcggggc
    14641 agccaggtgg cgatccagct gcggaacagc atccaggtga tcggggtgtt ctccgcgcgg
    14701 gccgacagca tggtgcttcg gatcgacttg cgcccaccgg gctggccggt ccggggccgg
    14761 gtgatccggg tggaaagtcc ggcggtgccc agggaccagc cgctcgcggc ggtcgaagcc
    14821 atcgccagca agctggacgc ctttctccgg agggcggtcc cgtaggaatg caggatgcgg
    14881 agtgcagaat tcagaagggt ctttgcgcct cgtcaccctg agcgaaccgc cgtcttacct
    14941 ccccaacttc tccagccgct ccagcgcctt catcagatct gccttcgcct ccagcagtcc
    15001 cgccatcgga tcaccccgct gccgcatccg gtccggggcg ctcttgatgg tgaaggcctt
    15061 gggattgagc gactggttga cctcatccca ccggagcggc atcgagacgg gcgcaccggg
    15121 gagcggtctc acgctgaagg gcgcgaccag gagccggcca tacccgttct gcacgtaatc
    15181 gaggtacacc ttgccgtccc gccgctgaat cgcccgcacc acggtggcga tatcgcgggc
    15241 gcgggaaacc acaacctggg agagcagctc gccgaaggat cggctctgtt cgtaggtgag
    15301 ctgccggttc atgggaacca gcacatggat gccgctcgat ccactggtct tcacgaaatg
    15361 cgggagaccc acctcgtcgc acagctcatg caacaccagg gcaaccttca ccacatcgga
    15421 gaagggtgcc tccttggggt ccaggtcgag cacacaccag tcgggtaatt ccagcgagcc
    15481 aacgctgctg agccagatat ggagcgggat ggatcccgag ttggccaggt acaggaggga
    15541 cggttcgtcc tcggccacga agtagctgat ctcgcgctgg gtgtcttcgc tccagacccg
    15601 ctcggtacga agccactccg gcgtgaatcc gggcgcgtcc ttctggaaaa aggacttgcc
    15661 ggcgatcccg tcgggatatc gggtgagcac caccggacgg ttcctcagga agggcagcag
    15721 ccaggggccg atcgcgcggt agtactcgat caagtcgccc ttggtatagc cctcgtcggg
    15781 ccagaacacc ttgtcgagat tggagaaggc cactttgcgg tccaccgccg ccggtgggtc
    15841 ggccccgacc ggtgtttcca gctcctccag ctgctccggc tcccggcgaa tgcactcctc
    15901 cggcgtcttg tcatcgcgga agcgcaggaa taccggctgc cggagcaggg cctcgtcggt
    15961 ccattctttg taccgcacct cgcacaccag ctccggctcg acccagaagg tgtcggagcc
    16021 ggtgggcacc ggtccctcgc agggcggggt gggacgacgg gcccgctcca gctccgagcg
    16081 cagctgggcc agttccttct ccttgaatcc gctgccggcc cgtccggcgt aggtcagcag
    16141 tccgttcacg taatcggcca ggtgtagtgc gccgaggccg gtgcgcgatc cgcgcggagc
    16201 ggtgaaaccc accaccacga agtcgtcggt ccggtccacc cggaccttga gccagtgggg
    16261 tgagcggccc ccctggtaga ccgaatcggc ccgttttgcc accagaccct cgagtcccat
    16321 cttctccacc tgggcgaaca gctgctcgcc ttcccgctcg aagtgatcga ggtagtggac
    16381 ctggccggcg ggagggagca gctcccgcag gagccgcttg cgttcggtga gcggcagtcc
    16441 ccggagatcg cggtcttcga acgccagaaa atcgaaggcg tagaaggtca ccgggttctc
    16501 gagggtggcc cggcgaatct cggtgggccg caggaaccgg gcccgctgct gcagccgctg
    16561 aaagctgggc cggccctgct cgtcggtcgc caccacttcg ccgtccagaa tgatgtggcg
    16621 gtacggcagc gcgctcacgg cgcgcacgat ctcagggaac gagccgttgg cctcgttccc
    16681 gcgtcgggtg accagccgga cccggccctc ggtcagctcc gccaggatgc gatagccgtc
    16741 cagcttgagc tcgaacagcc agccgtcacg ggtgaagggc gcctcgaccg tctcggcgtg
    16801 catgatgtcc acgtcgtcca cccgcaccga ccggcgggcg gccttgagcc ggtcgagctc
    16861 ggtccggatg ggggtggcga gatcgcggcc gtcgcgcagc tcctccaccg tgcggccgga
    16921 gaggaccgac tcttccggca cctcacgccc gcccgccgtc atgagaccgt cgcgctcctt
    16981 gatcagcagc cagtccttct ccgatttctt gatcttcacc agggtccacc ggcccttgag
    17041 cttgtgcccg tgcagctcga acagcagctt gcccttctcc atcccggcca ccggatcttc
    17101 gatcggctcc caggtcccgc ggtcccagac gatgaccgcc ccggcgccgt agttcccctc
    17161 cgggatgatg ccttcgaagt caccgtattc gatgggatgg tcttcgacgt gaaccgccaa
    17221 tcgcttgtcg gcctggtcga aggaaggccc cttgggcacg gcccacgact tgagcgtgcc
    17281 ttcgagctcg agccgaagat cccagtgcat ccgggtcgcg gcgtgcttgt gcatcacgta
    17341 cagccggccc ggttcccggc ccaccacacc tgatggctcg ggagtgcgct cagcgtcgcg
    17401 tttggcccgg tacgctttca gcaagttgtc gggaggatcg tcgggcggca tgacgaagag
    17461 taggttatcc gggaggaagg gaggagtcga gtgcagaatg cggattgcag aatgcagag
//
LOCUS       DASWKS010000034         3744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_16623, whole genome shotgun sequence.
ACCESSION   DASWKS010000034 DASWKS010000000
VERSION     DASWKS010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16623"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VGA78_01225"
     CDS             complement(<1..654)
                     /locus_tag="VGA78_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892506.1"
                     /translation="MSAADQPAQPAGAPAAEPSPAASRAMMHRLDRLEHENRKLRRQG
                     TTMLVVTAILLGVGVALVVTAARHGMPGFVPDVVEAKEFLLRDSEGRVRGAWGSDQDG
                     AIRLVLQGDQSNTSIKLNLLADGSSGLTFTDSAGTPRLVVALLPDNTVNLVLGDQRGV
                     ARTVLGLNPNGGSTLVFADQGGTTRTGIGVDNRGRSMLSVGQESGVVEEERADTATKK
                     "
     gene            complement(938..2290)
                     /locus_tag="VGA78_01230"
     CDS             complement(938..2290)
                     /locus_tag="VGA78_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892507.1"
                     /translation="MSTGFIPRDAVEEDAPEEAPRDPPLPQTVADTGLPEEFIVDLAL
                     KLLYVHGPRSGKQITDSIKLPFPFVDEQLLTMQQRRFVEVKSTTGASRAGYVFDLTQM
                     GRERARDALTSSMYVGPAPVPLAQYRHWVAVQSIQHVHVTRRDVEASFAPLVLNQETL
                     DEVGPASNSGRSMFLHGESGNGKTAIAEIVARMLGGSLWIPYAIEIDGQIIVVYDPLY
                     HRSPHDKARAADADGDDLWLPDTNHDLRWVKAARPVVLTGGELILDQLDLQYDNYTKL
                     YQAPFQVKANGGVLIIDDFGRQRVPPRDLLNRWIVPLEKRVDFLTLHTGSKFPIPFDV
                     LLVIATNIDPKQLVEEAFLRRIHYKIRVESPSVEQYERIFRSYCEGKGIPYRPEAVQQ
                     VYRNFYHAHSIAPRGCHPRDVVDHLLDIAKYLEIPPLLTQDLVERAGRSYFMDFPTAT
                     "
     gene            complement(2287..2658)
                     /locus_tag="VGA78_01235"
     CDS             complement(2287..2658)
                     /locus_tag="VGA78_01235"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX9892508.1"
                     /translation="MSQNRGAVKVTNVTRGTVVGSDVYFASTWWGRARGWLGHPEPAQ
                     GEGLLLIPCKGIHMVGMKYPIDVAFLDGDGGVVAIYASLAPWQRTKLHNNANTALELP
                     AGTLARTGTVVGDTLTWEVAS"
     gene            complement(2676..3620)
                     /locus_tag="VGA78_01240"
     CDS             complement(2676..3620)
                     /locus_tag="VGA78_01240"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9892509.1"
                     /translation="MVPFVIAALIALTVAGVVLLVANLFPAQPEVIRRLHQMPGSEGQ
                     AAFERRKREERTVKLQELLGALGERVQSTPAAGASAARKLLVGAGYFGPTALAVLYGI
                     KIASAALIGFVFFALSPTIASALGLPRNLILLIGVWGTVLGWVAPTFILASMANRRKR
                     EILRGLPDALDLMVVCVEAGLGLNQAIQRVAEEITAMAPALGEQMVLVNLEIRAGTPR
                     DDALRNFAARTDLEDVRSIAAVLIQTERFGTSVAQALRTHSEVLRTKRRQRVEEASAK
                     TAIKMLFPLVFCIFPALFIVILGAGVIQAIKVLGGAGF"
BASE COUNT          631 a         1254 c         1233 g          626 t
ORIGIN      
        1 ctttttggta gcagtatccg cccgctcttc ctccaccaca ccgctttcct gccccacgga
       61 cagcatcgat cggccccggt tgtcgacgcc gattccggtc cgagtggtcc cgccctggtc
      121 ggcgaaaacc agggtgctgc cgccgttggg attgagaccc agcacggttc gggcgactcc
      181 gcgctgatca cccaggacca gattcaccgt attatcgggc agcagggcga ccaccaggcg
      241 aggggtcccg gcgctgtcgg tgaaggtcag gccgctggag ccgtcggcca ggagattcag
      301 cttgatgctg gtgttgctct ggtcaccctg cagcaccagc cggatggcac catcctgatc
      361 cgatccccag gccccccgca cccggccttc gctgtcgcgg agcaggaact ccttggcttc
      421 gaccacgtcg gggacgaacc cgggcatacc gtgccgcgcc gccgtgacca ccagcgcgac
      481 gcccacgccc agcaggatgg ccgtcacgac cagcatcgtg gtcccctggc ggcggagctt
      541 gcggttctcg tgctccaggc gatcgagccg gtgcatcatc gcccgggacg cggcggggga
      601 cggttctgcg gcgggagcac cggccggttg agcaggctgg tcagcggcgg acatggattc
      661 tcctgaacta caggactaag gactcaggtc taaggtctaa gtaactcaac ggccgcttgc
      721 gcggctacgg caccgacgcg gggcactgtg cgctgggaat tcgctcgcgg aaaggcaggg
      781 agcaggaagg agggagcagg gagcaggaag ccgggagccg gctgccccgc tccgtctacc
      841 tctccctcct tcctgcttcc tgccttctgc gagcgaattc cgaggtccgc caaggactaa
      901 tcgagccctc gcaccggccg cccttcgtga ctcgcgccta agtcgccgtt ggaaagtcca
      961 tgaaatagga tcgacccgcg cgctccacca agtcctgcgt cagcagcggc ggaatctcca
     1021 gatacttggc gatatccagc aggtgatcga ccacgtcccg cggatggcag ccccgcggcg
     1081 cgatcgagtg cgcgtgatag aagttccggt acacctgctg caccgcctcg ggccggtaag
     1141 ggatcccttt gccctcacag tagctccgga agatccgctc gtattgctcc acgctgggac
     1201 tctcgacccg gatcttgtag tggatccggc gcaggaaggc ctcttccacc agctgcttgg
     1261 gatcgatgtt ggtggcgatc accagcagca cgtcgaacgg gatcgggaac ttggacccgg
     1321 tgtgcagggt caggaagtcc acccgcttct ccagcggcac gatccagcgg ttgagcaggt
     1381 cgcggggggg cacccgctgg cggccgaagt catcgatgat cagcaccccg ccgttggctt
     1441 tcacctggaa cggggcctgg tacagcttgg tgtagttgtc gtactgcagg tccagctggt
     1501 ccaggatcag ctcgccgccg gtgaggacca ccggccgagc cgctttcacc caccgcaagt
     1561 cgtggttggt gtcgggcagc cagagatcgt cgccgtccgc gtccgcggcg cgggccttgt
     1621 cgtgaggcga gcggtggtag agcgggtcat agaccacgat gatctggccg tcgatctcga
     1681 tggcataggg gatccacagg ctgccgccca gcatccgggc gacgatctcg gcgatggcgg
     1741 tcttgccgtt gccggactcg ccatggagga acatggagcg gcccgagttg ctggcgggtc
     1801 cgacttcgtc cagggtctcc tggttgagca ccagcggcgc gaaggaagcc tccacgtcgc
     1861 gccgggtgac gtgcacatgc tggatcgact gcaccgcgac ccagtggcgg tactgcgcca
     1921 gcggcaccgg cgccggcccc acatacatgc tgctggtgag ggcgtctcgg gcccgctcgc
     1981 gtcccatctg ggtgagatcg aagacgtatc ccgcccggct ggcgccggtg gtgctcttga
     2041 cctccacgaa ccggcgctgc tgcatggtca gcagctgttc gtccacaaag gggaacggca
     2101 gcttgatgga gtcggtgatc tgcttgccgc tccggggacc gtggacgtag agcagcttga
     2161 gcgccaggtc cacgatgaat tcttccggca ggccggtatc ggccacggtc tgaggcaggg
     2221 gtggatcgcg gggcgcttcc tcgggcgcgt cttcctccac ggcgtcgcgc ggaatgaatc
     2281 cagtgctcat gacgcaacct cccaggtcag cgtgtcgccc accacggtcc cggtgcgggc
     2341 gagggtcccg gccggcagct ccaatgcggt gttggcgttg ttgtgcagct tggtgcgctg
     2401 ccagggcgcc agcgatgcgt agatcgccac caccccgcca tcgccatcca ggaacgccac
     2461 gtcgatcggg tacttcatcc cgaccatgtg gattcccttg cagggaatca gcaggagccc
     2521 ttcgccctgg gccggctcgg gatgtcccag ccagccccgg gcccgtcccc accaggtgga
     2581 ggcgaaatac acatcggagc cgaccacggt tccgcgggtt acgttggtaa ccttgacggc
     2641 ccctcggttc tggctcacgg ccgtctagtg gtcactcaga agccagcccc gcccagcacc
     2701 ttgatggcct ggatcacgcc ggcgcccagg atcacgatga acaaggccgg gaagatgcag
     2761 aacaccagcg gaaacagcat cttgatcgcg gtcttggccg aggcttcctc cacccgttgg
     2821 cgtcgcttgg tgcgcaggac ctcggagtgg gtccggaggg cctgggctac cgaggtgccg
     2881 aatcgctcgg tctggatcag caccgcggcg atggagcgga cgtcctcgag gtcggttcgc
     2941 gccgcaaagt tccgcagcgc gtcgtcgcgc ggggtgccgg cccggatctc caggttgacc
     3001 agtaccatct gctcccccag cgccggggcc atcgcggtaa tctcctccgc cacccgctgg
     3061 atcgcctgat tcaggcccag gccggcttcg acgcagacca ccatgaggtc cagagcgtcc
     3121 gggagtcccc gcagaatctc ccgctttcgc cgattggcca tgctggccag gatgaatgtc
     3181 ggcgccaccc atcccagcac cgtgccccag acgccgatca gcaggatgag attgcgcggc
     3241 agaccgagcg ccgaggcgat ggtgggcgac agggcgaaga acacgaaccc gatgagggcg
     3301 gcactcgcga tcttgatccc gtagaggacg gcgagggcgg tcggcccgaa gtatccggcc
     3361 ccgaccagca gcttgcgggc cgcagaagct ccggccgccg gggtagactg gacccgctca
     3421 cccagcgccc ccagcagctc ctgcagcttg acggtccgtt cctcccgctt gcggcgctcg
     3481 aaggcggcct ggccttcact acccggcatc tggtgcagcc gccggatcac ctccggctgg
     3541 gccggaaaca ggttggccac cagcagtacc acgccggcga cggtgagggc aataagggcg
     3601 gcgatgacga aaggcaccac ggtcagaact cgatgtcgag gattctacgg atccagaggt
     3661 aacccaatac ctgaaacacc agagcacctg ccagcatgta ccgcccgatc tcctccgtga
     3721 agatcggcat catgtacccg gggt
//
LOCUS       DASWKS010000035         5935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3342205, whole genome shotgun sequence.
ACCESSION   DASWKS010000035 DASWKS010000000
VERSION     DASWKS010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5935
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3342205"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4084
                     /locus_tag="VGA78_01245"
     CDS             <1..4084
                     /locus_tag="VGA78_01245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX9892510.1"
                     /translation="QVQVAVQPPASAQSGIPLAPQPEIQVTDQSGNPVSSAGISVVAS
                     LGSGTGTLGGTLTIPTNASGRAVFTNLAITGPSGSFTLRFTTAALGSVVTDPVTLGAG
                     SATQLSIAIQPANTAQSGAALAPQPAIQLRDGANNPVALAGVTITAGIASGGGTLLGT
                     TTAVTNGSGLATFVGLGISGTVGNRTLQFTAPGLTPVTSNTIAITPGAAAKLALTAQP
                     SPTASSGTPFVQQPVVQIQDAAGNSVAESTTAITAAIETGAGGSLGGGLIALTNAAGQ
                     ASYTNLALTGASGNYTLRFTSGTLTAVVSNTIALGAGAGSKLSLSQQPSPSAKNGQNF
                     PQQPVAQLLDASDNPVAQAGVPIAVTILSGGGTLSGTRPIPTNGAGQAAFTDLAITGT
                     VGDRTLIFAATGYSSITSDIISLTPGDPAALEITTQPSGSAQSGVPLAQQPVIHLEDV
                     SGNAVSQAGIVVTATLASGTGTLANASATTDGSGVATFSSLTITGTVGSKTLGFSAAS
                     LTGTTSGIVNLASGAATQLTITTQPGGAASGQSLTPQPQVQLRDGAGNPVSQVGVIIT
                     AAIATAPGGSPTLTNPTATTDPNGLATFSGLTITGPVGSYTLQFSSGSLTPTTSGPVI
                     VGAGTPSQLTITSAPSSNAQSGSALASQPLIQVRDAGGNAVGQAGLTVTAVIASGPGG
                     SLGNASAITDGTGLATFTGLTITGPVGGYTLRFESGALTPATSGTITLAAGAPALITI
                     EVQPPSNAQSGQAFTADPRVRVLDAGSNPLAAVSVTVALGTGAGNGTLNGPLAQSTDA
                     DGRVTFAGLSISGLIGNYTLGFAAGAASATSTGITLSAGTAAKLSIQTQPSPTARNDQ
                     EIAIQPVIQVEDAGGNPVTTSGLTVNAAIVSGGGTLSGTSATTNGSGQASFTGMKITG
                     TIGTRTIQFSSGSLAVATSNGVTVTAGTATKILIVTNPPTSISSGSTLSPNPVVDLRD
                     VSDNDVDSSGVEVTVGLASGAGTLSGTLVRTTGASGQAVFDDLVISGVPGDRTLGFSG
                     SGLAGATSNTITVTAAAPAQLVITVSPSNTARSSIPLATAPEVQVLDGSSVPVSGVTV
                     NASLDQAGSLSGSASGVSDIDGKVVFTGLTITGPVGNKTISFSANGLPTTTTSVIALS
                     AGPATQLGIITQPGSPAINGELFSTQPVLQLLDGAGNSVDSSGASVDVAILAGTGVLA
                     GVTTAVTGANGTAPFVDLAITGSTASPFTLQFTATGLTSATSNNIILQAGAATQLIIK
                     TQPPASAVTAVTLSTPPEVELRDSGGNLVATNGVEVTAVLETISGAGVITPGSTNPVS
                     TVGGVASFGNLSITGAGTFTLRFDAPGVSSATSIVITVTP"
     gene            4462..>5935
                     /locus_tag="VGA78_01250"
     CDS             4462..>5935
                     /locus_tag="VGA78_01250"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9892511.1"
                     /translation="MAQVDVQPAGAGLIIGSTQQFTATPRTASGIPVPNRQTTWSSSD
                     PGIATVSVSGLVTAVGLGEVEITARVDGASGSRPVNVSPRPVAQVTVQPPTAEFPVGQ
                     SVQLQVTTLDSEGQPLTGRTVLYTSDNPAVVTVSATGLMTGVGAGQTLVRANSEGKEG
                     TCTVTVTTRPATKLGFTTQPANGTAGQALGAVLVAVQDVTGGTVLGATGAVTIALSDN
                     PGNATLGGTLTVNAVAGVATFSNLVLNRVASGYTLQATSGSLTPAISNPFAIAPGPPA
                     ALAITTQPPGNTQSGAALNPQPVVQLRDTQGNPVPQAGVAITAVLLGTGGTLNGTPTA
                     TTNPSGSAVFSNLAITGSAGVFQIRFTSPNLIAATSSNVAITAAALAITTHPSATAAS
                     GVVLAQQPVIRLVDALGAPVPQAGVVISASLTGAGAALGGILSATTNGSGVATFTDLT
                     ITGTVGAYQLSFAAPGMAPISSGTINLTAGVAAKLALAVAP"
BASE COUNT         1064 a         2037 c         1886 g          948 t
ORIGIN      
        1 ccaggtccag gtggcggtcc agccgccggc ctcggcccag agcggcatac cgctcgcgcc
       61 ccagcccgag attcaggtga cagaccagag cggcaacccg gtgtcgagcg ccgggatctc
      121 ggtggtcgcg tcgctcgggt ccggcaccgg cacgttaggc ggtaccctca ccatcccgac
      181 caacgccagc ggccgagcgg tcttcaccaa cctggcgatc accgggccgt cgggcagctt
      241 caccctgcgg tttaccacgg ccgcgctggg ctcggtggtc acggatccgg tgacgctcgg
      301 ggccggcagc gccacccagc tctcgatcgc gatccagccg gcgaacacgg cgcagagcgg
      361 cgcggccctg gccccgcagc cggcgattca gctgcgcgac ggcgccaaca atccggtcgc
      421 gctggcgggc gtgacgatca ccgccggtat cgcgtcggga ggcggaacgt tgctcgggac
      481 aacgacggcc gtaaccaacg ggtcgggcct ggccaccttc gtcggcctgg gcatcagcgg
      541 cacggtgggg aaccgcaccc tgcaattcac cgcaccgggg ctgacgccgg tcacctccaa
      601 caccatcgcg atcacgccgg gtgcggcggc gaagctggcg ctgaccgcgc agccgtcgcc
      661 caccgcctcg agcgggaccc cgttcgtgca gcagccggtg gtgcagatcc aggatgcggc
      721 cggcaacagc gtggccgaga gtaccaccgc gattaccgcc gcgatcgaga ccggggcggg
      781 aggatccctg ggtggcgggc tgatcgcgct gaccaacgcg gcgggccagg cgagctacac
      841 caacctggcg ctgaccgggg cgtcggggaa ctacacgctg cgattcacat ccggcaccct
      901 gacggccgtg gtatccaaca ccattgcgtt aggcgcgggc gcgggcagca agctgagcct
      961 ctctcaacag ccgtccccct cggccaagaa cggccagaac ttcccgcagc aaccggtcgc
     1021 ccagttgctc gacgcctcgg acaaccctgt ggcccaggcc ggggtgccga tcgcggtcac
     1081 catcctgagc ggcggcggca cgctcagcgg cacccggccg atcccgacca acggcgcggg
     1141 gcaggcggcc ttcaccgatc tggcgatcac cggaacggta ggggaccgga ctctgatttt
     1201 cgcggcgacg ggctattcca gcatcacgtc cgatatcatc agcctcacgc ccggggatcc
     1261 ggccgccctg gagatcacca cccagccctc gggctcggcc cagagcgggg tgccgctggc
     1321 gcagcaaccg gtgattcacc tcgaggatgt gagcggcaac gccgtgagcc aggcggggat
     1381 cgtggtcacg gccactctcg cgtccgggac cggcaccctg gccaacgcca gcgcgaccac
     1441 cgatggctcg ggcgttgcca ccttctcgag tctcactatc acgggtacag taggatcgaa
     1501 gaccctaggg ttcagcgcgg ccagtctgac cggcactacg tcgggcattg taaacctggc
     1561 ctctggagcc gccacccagc ttaccatcac aactcagccg ggtggggccg cgagcggtca
     1621 gtcccttact ccccagccgc aagtgcaatt acgggatggg gccggtaatc cggtgagtca
     1681 ggtaggcgtg atcatcaccg cagcgatcgc aacagcgcct ggaggaagtc caactctcac
     1741 gaaccccacc gccacgaccg acccaaacgg cctcgcgacg ttcagcgggc tcaccattac
     1801 cgggccagtc gggagctaca ctctgcagtt cagctcaggc tcgcttacgc ctacgacgtc
     1861 agggcctgtt atcgtcggag ccggtacgcc gagccagctc acgatcacat ctgcgccgtc
     1921 gtcgaacgcc cagagcggtt cggcgctcgc ctcacaaccg ctcattcaag tcagagacgc
     1981 aggcgggaat gcagtaggtc aggcgggcct tactgtcact gcggtaatag cttcgggacc
     2041 gggtgggagc ctggggaacg ccagcgcgat caccgatggc acggggctcg ccactttcac
     2101 tgggcttacg atcaccggtc cagttggcgg ttacaccctg cggttcgagt cgggcgctct
     2161 gacaccagcc acatcgggga ccatcacgct tgcggcggga gctccggccc taattaccat
     2221 cgaagtccaa cccccgtcga acgcccagag cgggcaggct ttcacggccg acccgcgagt
     2281 gcgagtgctc gacgcaggtt ccaacccttt agccgcggtg agtgtgacag tggcgcttgg
     2341 gactggggcc ggcaacggaa cgctcaacgg ccctctggcc cagagcacag atgcggacgg
     2401 tcgcgtcacg ttcgccggac tttccatttc cggactgata ggcaactaca cactggggtt
     2461 tgcggccggg gcggctagtg cgacttccac tgggatcaca ctgtctgctg gtacagccgc
     2521 gaagctcagc atacagaccc agccgtcgcc gaccgcccgc aacgaccagg agatcgcaat
     2581 ccaaccggtc attcaggtgg aggatgccgg aggaaaccct gtcactacga gcggcctgac
     2641 tgttaacgca gccatagtct ccggcggggg aacgctttca gggacgagcg ccacgaccaa
     2701 cgggtccggg caggccagtt ttacgggcat gaagatcacc gggacgatag gcaccagaac
     2761 gattcagttc agttccggta gcctcgcggt tgcaacatcc aatggcgtga ccgtcacagc
     2821 cggaacggcc acgaagattc taatcgtcac caatccgcca acgagcatca gtagcggctc
     2881 gacgctttcg cccaatccag tggttgatct ccgggatgtg agcgataacg atgtggattc
     2941 ctcaggagta gaggtgacgg tgggacttgc gagcggtgct ggtactctgt ctggtactct
     3001 ggtgcggacc acgggagcca gcggccaagc cgtcttcgac gatctggtca tttcaggagt
     3061 cccgggtgac cggactctcg ggttcagcgg tagcgggctg gccggggcca catccaatac
     3121 gataacagtg accgcggcgg cgcctgccca gcttgtcatc acagtttcac cttcgaacac
     3181 tgcgcggagc agcattccgc ttgctacagc tccagaggtg caggtactgg atggctcaag
     3241 cgttccagtg agcggggtga cagttaatgc atccttggat caggccggtt ctctgtctgg
     3301 ttccgccagc ggcgtgagtg atatcgacgg caaggtggtt tttaccggtc tcaccatcac
     3361 agggccggtg ggcaacaaga ccatcagctt cagtgccaac ggcctcccaa cgaccaccac
     3421 gagtgtcatc gcactcagcg ccggcccggc gactcagctg gggatcatca ctcagccggg
     3481 atctcccgcc atcaacgggg agctgttctc gacgcaaccg gttctccagt tactcgatgg
     3541 cgccgggaac agcgtagact cgtcgggagc ttcggtcgac gtggcgattc tggccggaac
     3601 cggcgtgctc gccggggtta ctactgccgt gacgggtgcc aacggcaccg cgccattcgt
     3661 cgacctggca attaccggca gcacggcgag tcccttcacg ctccaattca ccgcaactgg
     3721 gctcaccagt gcgacttcaa acaacatcat cttgcaggca ggtgcggcaa ctcagctgat
     3781 aatcaagacc caaccacctg caagtgccgt aacggctgta accctgtcga cgcccccaga
     3841 agtggaactt cgtgacagcg gcggcaatct cgtcgccacg aatggcgtgg aggtaacggc
     3901 ggtgctagag acaatcagtg gggccggcgt gatcacccct gggtcgacca atcccgtgtc
     3961 taccgtcgga ggcgtggcga gctttggtaa cctctcgatc actggagcag gaaccttcac
     4021 cctgaggttc gacgcaccag gggtctcaag cgccacttcc atcgtgataa ccgtcacgcc
     4081 ctgagccgcg gcgagtagcc ccgtggcgcc gcctccacat gaatgtggtc gcatcgcctg
     4141 cgccggcagc ccgaacccgc gggcctgacg acccggatag tgcccctcca gtgtatcgac
     4201 ttgaccaatg ccaatccgga ctgcatagtc gtagatacaa ccggggggcg taagttttta
     4261 tacagcaagg tgttagcata actgcgcgca cgcttcgtgc acgattttcg ctacgctgac
     4321 gccccgcccc ccaattcagg aagctcgagg cgctcggtca tctccatgcg aagggcgtgt
     4381 ctccggttgc ttgcatccgt gtcgctcgcc gggctgtcgg cttgtgcatc cgacagcacc
     4441 ggcgctgggg aggtcctggt cgtggctcag gtggacgtgc agccagccgg ggccgggctc
     4501 atcataggca gcacccagca gttcaccgct acgcccagga ccgcgagcgg catcccggtt
     4561 cccaaccgac agaccacctg gtccagctcc gatcccggga tcgccaccgt ttcggtgtcc
     4621 ggcctggtca ccgcggtcgg ccttggcgag gtagaaatca ccgcgcgggt cgatggagcc
     4681 agtggaagcc ggccggtcaa cgtgtcaccc aggccggtgg cccaggtcac ggtgcagcca
     4741 cccacggcgg agtttccggt aggccaatcg gtgcagctcc aggtgacgac gctcgactcg
     4801 gaaggacagc cgctcaccgg ccggacggtg ctctacacca gcgacaatcc cgcggtggtg
     4861 accgtttcgg ccaccggtct catgaccggg gttggcgcgg gtcagactct ggtacgagcc
     4921 aattcggagg ggaaggaagg cacttgcacc gtcacggtca cgacccggcc cgccaccaag
     4981 ctcgggttca cgacccagcc ggccaacggg accgcgggcc aggcacttgg ggcggtgctg
     5041 gtggcggtac aggacgtaac gggcggtacc gtgctcggag ccacgggagc cgtcaccatc
     5101 gccttgtcgg acaatcccgg caacgccacg ttgggcggaa ccctgaccgt caacgcggtg
     5161 gccggagtcg ccaccttcag caatctggtc ctgaaccggg tggcctcggg ctacacgttg
     5221 caggccacct cgggcagtct cacacccgcc atcagcaacc catttgccat tgcgcccgga
     5281 ccgccggcgg ccctcgcgat caccacccag ccccccggca acacccagag cggagcggcg
     5341 ctcaacccgc agccggtggt gcaactccgc gatacccagg gcaacccggt ccctcaggcc
     5401 ggggtcgcaa tcaccgcggt cctgctgggg accggcggta ccctcaatgg gacgccgacc
     5461 gccaccacca acccgagcgg gtccgcggtc ttcagcaatt tggcgatcac cggctcggcc
     5521 ggagtctttc agatccggtt cacgtcgccc aatctcatcg ccgccacttc atccaacgtt
     5581 gcgatcaccg cggcggccct cgcgatcaca acccaccctt cggccaccgc ggccagcggc
     5641 gtggttctgg cccaacagcc ggtgatccgg ttggtcgacg ccctgggagc gccggtgccc
     5701 caagccgggg tggtgatctc cgcctcgctc accggcgccg gcgcggcgct gggcgggatc
     5761 ctgtcagcta cgactaacgg ttccggcgtg gcgacgttca ccgacctcac gatcaccggc
     5821 acggtgggag cctaccagct gagctttgcc gcaccgggca tggcgccgat ttcctcgggg
     5881 accatcaacc tcactgccgg ggtcgcggcc aagttggcgc tggcggtggc accgc
//
LOCUS       DASWKS010000036         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2975776, whole genome shotgun sequence.
ACCESSION   DASWKS010000036 DASWKS010000000
VERSION     DASWKS010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2975776"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1409
                     /locus_tag="VGA78_01255"
     CDS             <1..1409
                     /locus_tag="VGA78_01255"
                     /inference="COORDINATES: protein motif:HMM:NF006560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9892512.1"
                     /translation="GQSSEHHDLVILHGRVIDPETGFDGIANVGITGGIIRVISSAPI
                     TGKQIIDGTGLVVTPGFIDILSYDPNPIGAWNKIADGVTTALAMHGGSANPDAWYAHH
                     TRNRPPVNFGASFFHTEARHQLGLSRYQPANARHIRQLTAFAEHALRRGALGISISPE
                     YIPGATGDEILPLMHLAKQYDVPVFFHARYSDMEEPGTNLDALNEIIAYARTSGAAVH
                     IEHLNSTGGTFSMPQSLGMLEQARQDGLDITACTYPYAFWATYLNSARFDRGWQTRFR
                     ISFGDLQLGGSSERLTEQSFRKYRGMGKLAVAYAIPEDDVVGALQSPLVMIGSDAILE
                     RGFNNHPRASGTFARTLGVYVRERGVLSLMDAVAKMTILPARRLELRSEAMRRKGRLS
                     AGADADITIFDYDKVLDRATVEHPEYQSTGIEYVIVHGQIVKDPAGLRRSTRPGRPIR
                     NRLEPDPLVPATRMVTGQ"
BASE COUNT          268 a          525 c          459 g          259 t
ORIGIN      
        1 ccggccagtc gtccgagcac catgacctcg tcatcctgca tggccgtgtc atcgatcctg
       61 aaacgggatt cgatggcatt gccaatgtgg ggattacggg tggcatcatc agggtgatct
      121 cttccgcacc gatcacaggg aagcagatca ttgatggaac cgggctggtg gtaacgcccg
      181 gcttcatcga catcctgtcc tacgatccca accccatcgg cgcctggaac aagatcgccg
      241 acggagtgac caccgcgctg gcgatgcacg gcggatctgc gaaccccgac gcgtggtacg
      301 cccatcacac ccgcaaccgg ccccccgtca acttcggggc ttcgttcttc cacaccgagg
      361 cccgccacca gctggggttg agtcgctatc agccggccaa tgcgcgtcac atccgccagc
      421 tgacggcttt cgccgagcat gcgctccgcc gcggggcgtt aggcatctcg atttcgccgg
      481 agtacatccc cggggccacc ggggacgaga tcctcccgct gatgcatctg gcgaaacagt
      541 acgacgtccc ggtgttcttc cacgcccgct actccgacat ggaggagccg ggcaccaatc
      601 tcgatgcgct gaacgagatc atcgcctatg cccgcaccag cggggccgcg gtgcacatcg
      661 agcacttgaa cagcaccggc ggcaccttct caatgccaca gtcgctgggg atgctggaac
      721 aggctcggca ggatggactg gacatcaccg cctgcaccta tccctacgcc ttctgggcca
      781 cctacctcaa ttcggcccgg ttcgaccggg gctggcagac ccgcttccgg atctccttcg
      841 gcgatctcca gctgggcggc agcagcgagc ggctgaccga gcagagcttc cggaagtacc
      901 gggggatggg caagctggcc gtggcgtatg ccatcccgga ggatgatgtc gtcggggcac
      961 tgcaatcgcc cctggtgatg atcgggagcg acgcgattct cgaacgcggc ttcaacaatc
     1021 atccccgagc ctcggggaca ttcgcccgca ccctcggcgt ctacgtccgg gagcggggcg
     1081 tgctgtccct gatggatgcc gtggccaaga tgaccattct cccggcccgc cggctggagc
     1141 tgcgctccga ggcgatgcgg agaaaaggcc ggctctcggc aggtgcggac gccgacatca
     1201 cgatcttcga ctacgacaag gtcctcgatc gggcgaccgt cgagcacccc gagtatcagt
     1261 cgaccggcat cgagtatgtg atcgtgcacg gacagatcgt caaggatccg gccggcctcc
     1321 gccggagcac ccgacccggc cgcccgatcc gaaatcggct ggagcccgat ccgctcgtcc
     1381 ccgcgactcg tatggtgacg gggcagtgaa atcctcacgt cccacacccg gaaggccatg
     1441 atgctgtcgc tgatcaagcc cctctcctcc ctggcggttc ccctgatcgt ggcggccccg
     1501 ctcctggctc a
//
LOCUS       DASWKS010000037        14518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_18587, whole genome shotgun sequence.
ACCESSION   DASWKS010000037 DASWKS010000000
VERSION     DASWKS010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18587"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..1156)
                     /locus_tag="VGA78_01260"
     CDS             complement(200..1156)
                     /locus_tag="VGA78_01260"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX9892513.1"
                     /translation="MPGRNWSSEIWVTGVGCVSAAGPGNAALGALLESGSGALRADPQ
                     LGIPTGRAPDPPPLRQVRHLDRTAQFFAMAAEEAWASAGLTGGGDPPSDVAVIEGSSL
                     GSMADLLGTQRASGSHAHTSRPHPSHLVRYMPDAGAMAFAQAHGVEGPVFSVSAGSIS
                     GALAILEGYRRLATGEVDLIVAGGSECPVDRDIIGTFQAAGVIADPAECRPFDRHRKG
                     TVLGEGSGALVLEQAGHAVRGARADWPGFSAWVSAPSIPAGPDPGRMAPASGPRPSEP
                     WRRPEQQRLGGSRHMGPGLDPATPRKLAHCTCSSETGWEASP"
     gene            complement(1182..2795)
                     /gene="groL"
                     /locus_tag="VGA78_01265"
     CDS             complement(1182..2795)
                     /gene="groL"
                     /locus_tag="VGA78_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211302.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX9892514.1"
                     /translation="MAHKAMLFRASAREKVLRGATALADAVRVTLGPKSKCVLVGRKW
                     GAPVICNDGVTIAREVDLEDPEENLGAQVLREAAVRTGDVVGDGTTTSTLVAHAIFAE
                     GLRNVAAGASAVDLKRGLDRALTAAVTALKELSRPVASRREREQVATISGHNDPQIGA
                     MVADAVERVGPEGAITVEEAKGIETTLEVVEGMQFDRGYLSPYFVTDPAKMEAVLDNP
                     LVLLHEKRIVSLKDMLPLLEQVAKLGRPLLVVAEDVEGEALATLVLNKVRGLLQSVAV
                     KAPGFGDRRKEMLQDMGILTNGRVLAEEMGVTLAHLTAEELGTAVRVVSTREHTTLIG
                     GAGDRAAIAGRCDEIRRQIEKTTSDYDKEKLQERLARLTGGVAVIKVGAPSETELKNR
                     KEAVDDAISATKAAIAEGIVAGGGLALLRVIPAVEREADACEGDVRTGTLILRRALEV
                     TTRQIAENSAMDGGVVVDRMRAGTGNYGFDAARGEYCDLVEAGIIDSTKVLRVALENA
                     VSVASVLLLTEATLTELPEKKEAEGLPEA"
     gene            complement(2850..4022)
                     /locus_tag="VGA78_01270"
     CDS             complement(2850..4022)
                     /locus_tag="VGA78_01270"
                     /inference="COORDINATES: protein motif:HMM:NF037526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892515.1"
                     /translation="MTARGIEVATPSQALIERLAGLKAPRPLVITCYVPLRPQDRTRS
                     QYAITVRGALQRLELVIEQAGMAHDDRAMLQRDFDRIREYLADIEQLPHASGLALFVS
                     EAIGLFEAVPLSRVLHTRVELDARPRVAELLAGAQEVGTVVATAIDRTHARFFQVTSF
                     EVRELPGVTATATRGGKFHSDRQDSPGWGESHFHHRMLEERRRHAAVVAEELILRVTQ
                     TGAQGIFLGGPIRATSELLQALPEPLRHQVIGMSRLNPTAVTPAQIRQMVIEAGADAE
                     IEREQHLVAELEASLDTGWAVTGARPTLRALARGQVRTLFLRARHTLPGFRCGGAGRL
                     VISPADCQDEGTPVPLQDLVNESIEDALRQDVKIVMVGEPELGRKLNGFAALLRFR"
     gene            4677..5423
                     /locus_tag="VGA78_01275"
     CDS             4677..5423
                     /locus_tag="VGA78_01275"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEX9892516.1"
                     /translation="MIWAYTLASVGLVSLIPLAGLLLLRERTERVRRLALWLVSFAIG
                     ALLGGAVLHLIPEAFERLGSGPGLSLYLLAGFLGFFVLEKFLWLHGHNRRIVSPDRLQ
                     PVALLNLIGDGLHNLLDGMMIAAAYSAETSVGVAATVAVVLHEVPQEIGDFGVLLYSG
                     LPIRRAVLFNFLSGLAALAGAAITLAIGRFAAGSTDALLPIAAGAFIYVAASDLVPEL
                     RREESRSATLGQIGLVLLGIGMMALPRLLE"
     gene            complement(5443..6330)
                     /locus_tag="VGA78_01280"
     CDS             complement(5443..6330)
                     /locus_tag="VGA78_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892517.1"
                     /translation="MSRPASRLSQLRAGTGLALVLWLAPAGSTGPKVQERPGALLPGH
                     RIVAFYGNPRSAKLGILGALPPAIMLEELARTAERWAATDPTTPVRPALHLIATCAER
                     APGVERLYRGQYSSQTIEGVAGWAEARGWLLVLDLQVGHSSLAKEIARLLPWLSRPYV
                     HLALDPEFAMKDDTPPGRRIGTMDATEVNGAIALLARLVDSLGLPPKVLVVHRFTTAM
                     LTNAGSIRVDPRVQVVIDMDGFGTKSQKRATYRSIVAREAVQFTGFKLFTQPWLDRPL
                     MTPKEVLALRPRPVYILYQ"
     gene            6596..7249
                     /locus_tag="VGA78_01285"
     CDS             6596..7249
                     /locus_tag="VGA78_01285"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEX9892518.1"
                     /translation="MLSNVEMQKKVLEALDFEPSLDATHIGVATNDGIVTLTGQVPSY
                     ADKVAAERAVKRIFGVKGIAINLEVRLAGDARRSDSDLAAAAVRALEWDVQVPHQRIQ
                     VRVADGWVTLEGSADWNYQRESAYRAVRNLTGVRGVSNLIALTKKVMPGDVQSRIEKA
                     LKRTAELEARGIQVQTTGGKVVLEGKVHSWAEREEAENASWSAPGVTEVVDHLVVTA"
     gene            7344..7484
                     /locus_tag="VGA78_01290"
     CDS             7344..7484
                     /locus_tag="VGA78_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892519.1"
                     /translation="MPDGPKKFDNRRRIRTAAAKRFARTKIQKTDRKQTVRQVGRRRG
                     GY"
     gene            7489..7974
                     /locus_tag="VGA78_01295"
     CDS             7489..7974
                     /locus_tag="VGA78_01295"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9892520.1"
                     /translation="MSRTATMPVWEVMSPSPVTVHPDTPVRVLIALFERLDHNAFPVV
                     DARQVLCGLVTKLDLLRLLRPDAEFRVPDFADVAGCQVSQIMRRGVVTVEPDDPAAAA
                     ADLMVTTGLRSLPVVERKAGPPVLMGMLSRGDLLRGLWVESGGASAAVTPLAAQTRPQ
                     E"
     gene            complement(8103..8426)
                     /locus_tag="VGA78_01300"
     CDS             complement(8103..8426)
                     /locus_tag="VGA78_01300"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEX9892521.1"
                     /translation="MQTFVMLTRLSPEAVRHPQGYEVLERAAMNAIHAECPQVRWLHS
                     WAVLGPHDYLDVFAAPDLETAVRVATLVRIAGHAHTEVWGAVEWPAFREMVRSLPEAG
                     QLVAV"
     gene            complement(8496..9068)
                     /locus_tag="VGA78_01305"
     CDS             complement(8496..9068)
                     /locus_tag="VGA78_01305"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEX9892522.1"
                     /translation="MEQPLQITAHNLALSQDVEAVIRREVAKLEQFYPRIINCRVLLD
                     AEHRFPAGEVVAYGVRIDLTVPNGGLPTTRQTHEELLTAVQRAFDASRRQLEDHARIQ
                     RGEVGAPEVTPHGRVRLLFPWEGYGFLETADGREVYFHRNSVQDEAFDRLEVGLEVRF
                     VEEPGEKGPQATTVAPVFRGRRRRSHQPES"
     gene            9277..11049
                     /gene="acsA"
                     /locus_tag="VGA78_01310"
     CDS             9277..11049
                     /gene="acsA"
                     /locus_tag="VGA78_01310"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF003313.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX9892523.1"
                     /translation="MATATTTWPPLIDPVPTEASPTNLGDYEATRGSFSWGSARRQLA
                     GLPGGGLNIAWEAVGHHAAGRLADKVALRCLGKDGSRQELTFRDLDRLSSRFANALAD
                     LGAGRGTRVYVLAGRIPELYAAVLGGLKHGCVVCPLFAAFGPEPIRARLAIGRGEVLV
                     TTAPLYERKISGIRSDLPALQHVILIGEDPVSPGQGIHRWSALTERVRDEYAIPRSTA
                     SDLALLHFTSGTTGRPKGAMHVHGAVIAHAATARTALDLRPEDVFWCTADPGWVTGTS
                     YGIIAPLVLGVTSIVDEADFDLERWCSILEREGVSVWYTAPTAIRMMMRAGLEPFRRR
                     RFPHLRFLASVGEPLNPDAVVWGRDAFGHPFHDNWWQTETGSIMIANFAGTEIRPGSM
                     GRPVPGIEAGIVRREGEGVEEIREPGVEGELALRPGWPSMFRGYWEDPDRTTGCFAGG
                     WYLTGDLARRDEDGYYWFVGRSDDVIKTSGHLVGPFEVESVLLAHPAVAEAAVIGKPD
                     PVALEIVKAFVALKPGHAGDDGLRRDLLGFARSRLGAVVAPKELVFVDSLPKTRSGKI
                     LRRLLKARELGLPEGDISTLEGMP"
     gene            11046..12047
                     /gene="pdhA"
                     /locus_tag="VGA78_01315"
     CDS             11046..12047
                     /gene="pdhA"
                     /locus_tag="VGA78_01315"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX9892524.1"
                     /translation="MTVTAAMPVGAPPGRDHARDLLARMLLIRRFEERCIELYSQEKI
                     RGFLHLYIGEEAVAVGAMQALTADDAVVATYREHGHALARDISPGVIMAEMFGKVSGC
                     SRGRGGSMHLFDAARRFYGGYAIVGGGLPIAVGLALADRLQDRPGITACFFGDGAVAE
                     GEFHESLNLATLWKLPVLFLCENNRYAMGTAIERHQASTNIAAKASAYGMTGEQVDGM
                     DVLAVEAAVRQAAQQVRLGTGPVLLELLTYRFRAHSMYDPELYRSKDEVRRWMERDPI
                     ATFTARLRQWNLLDDAGLQVLEREAQAAVALAVEEAERGGLEPVEEVLRHVTLEATR"
     gene            12044..13033
                     /locus_tag="VGA78_01320"
     CDS             12044..13033
                     /locus_tag="VGA78_01320"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEX9892525.1"
                     /translation="MSRITYREAVRAALVTALENDPRVFLMGEDVGRYGGAYAASHGL
                     LDRFGPDRVRDTPLSESTFVGAGVGSALGGMRPIVEIMTVNFSLLALDQIVNNAATLR
                     HMSGGQLGVPLVIRMATGAGRQLAAQHSHSLEGWYAHVPGLRVVAPATVADAAGMLLA
                     ALREPDPVIIFEHASLYPMEGDVAEPLAPADLVQAALRREGDDVTLIAHGYSVWKALA
                     AADELAHDGISAEVIDLRILRPLDDATMLASVRKTHRVVAIDEAWRTGSLAAEVCARI
                     TEQAFYELDAPPARVCSAEVPMPYARHMEEAALPQATQIAAAVRAMLGSPVRG"
     gene            13041..14147
                     /locus_tag="VGA78_01325"
     CDS             13041..14147
                     /locus_tag="VGA78_01325"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX9892526.1"
                     /translation="MPSLGADMRAGRLLEWLKQPGDRVTRGDIIAEVDTDKGVIEVEV
                     FTSGVVERLLVEPGTRVPVGTPLATIREEGVPEAAPAAAGPPGVPAPPERHRASPLAR
                     RRAAELGLDLRTIAGSGPSGVVTREDVERASRAPAAPPEEAGEVDRTARMRAAIAAAV
                     SRSKREIPHYYLATTVDLGGLMTWLADYNRNRPVAERLGPNALLLKATALALRDFPDL
                     NAQWLEGRAVPAQGIHLGLAISLRGGGLVVATLPNTDQRPVSQLMTDVMEVVRRARTG
                     GLRSSELSGSTVTVTQLGDRGVESVFGVIYPPQVAIVGFGRVVERPWVVGGQVVPRPV
                     VTVTLAADHRASDGHRGGLFLFALSGLLQEPERL"
     gene            14171..14392
                     /locus_tag="VGA78_01330"
     CDS             14171..14392
                     /locus_tag="VGA78_01330"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HEX9892527.1"
                     /translation="MLRALGSVAPEADLTRLDPGRPIRDQLDIDSMDFMNFLLELDRE
                     LHVDVPEMDYARVATLDQCVAYLSARLET"
BASE COUNT         2259 a         4828 c         4912 g         2519 t
ORIGIN      
        1 ctctcggcga gcagtaacgc cgacccgccc gagcaggcca tcacggtgcg ggtgacccgg
       61 caagagggaa gctctgggtc ggattggtca tggcccaggg ttgccgggat gatctgtctt
      121 tgaaatgcca gaactaccgc gacggcctcc agcgcgccgc tcgctcccag cgtgtggccc
      181 agcgaggatt tcaggcccgt cagggggatg cttcccagcc ggtctccgaa gagcaggtgc
      241 agtgcgcgag cttccgcggc gtcgccggat cgagtcccgg tcccatgtgc cttgatccac
      301 ccaaccgttg ctgctcgggt cgtcgccagg gctcgctcgg ccgcggtccg gatgccggcg
      361 ccatccggcc tgggtccggt ccggctggaa tgctcggtgc actgacccac gccgagaatc
      421 cgggccagtc cgcgcgcgcc ccgcgcaccg cgtgcccggc ctgttccagc accagcgcgc
      481 cactcccctc tcccagcacg gtccccttgc gatgccggtc gaacggccgg cattcggccg
      541 ggtcggcgat gacgcctgcc gcctggaagg tcccgatgat gtcgcggtcg accgggcact
      601 cgcttccacc ggccacgatc aggtctacct cgcccgtggc caggcggcgg tagccttcga
      661 ggatggccag cgcgccggag atactgcccg ccgagaccga aaagaccggc ccctcgaccc
      721 cgtgggcctg ggcgaacgcc atcgcacccg catccggcat gtaccggacc aggtgagacg
      781 gatggggccg actggtgtga gcgtgggaac cggaagcgcg ctgtgtgcct aacaggtctg
      841 ccatcgatcc aagcgacgag ccttcgatca ctgcgacgtc cgacgggggg tccccgcccc
      901 cggtcaagcc ggcggaagcc cacgcctctt ccgccgccat cgcgaagaac tgcgcggtgc
      961 ggtccagatg gcggacctgg cgcagcggag gtgggtccgg ggcccggccg gtcgggatgc
     1021 cgagctgtgg atcagcccgg agcgcgccgc tgccggattc gagcaacgcc cccagggcgg
     1081 cattccccgg cccggctgcg ctcacgcagc cgacccccgt cacccagatc tcactgctcc
     1141 aattccggcc cggcactgga ctctcctcac ggggaagagg ttcaagcctc cggcagcccc
     1201 tctgcttcct tcttctcggg taattcggtc agggtagctt ccgtcagcag cagcacactc
     1261 gccaccgaga ccgcgttctc cagggccacc cgaaggactt tggtggagtc gatgattccg
     1321 gcttcgacca agtcgcagta ttccccgcgc gcagcgtcga acccgtaatt gccggtcccg
     1381 gcccgcatcc ggtccaccac caccccgcca tccatggccg agttctcggc gatctgccgg
     1441 gttgttactt ccagggcgcg ccgcaggatg agcgtgccag tacggacatc gccctcgcag
     1501 gcgtcggcct cgcgctcgac cgcgggaatc acccgcaaca acgccaggcc gcctcccgct
     1561 acgatgccct ccgcgatcgc ggccttggtg gcgctgatgg catcgtcgac cgcttccttc
     1621 cgattcttga gttcggtctc cgatggcgcg cccaccttga tgaccgccac accgccggtc
     1681 agccgcgcca gccgttcctg gagtttttcc ttgtcgtaat cggacgtggt cttctcgatc
     1741 tggcgtctga tctcgtcgca ccggcccgca atcgcggcgc gatccccggc accgccgatc
     1801 agggtggtgt gctcccgggt cgacaccact cggacggcgg tccccagctc ctcggcggtc
     1861 aggtgggcca gggtgacgcc catttcctcg gccaggaccc ggccgttggt gaggattccc
     1921 atgtcctgca gcatttcctt gcggcggtcg ccgaagccgg gtgccttcac cgccaccgac
     1981 tgcaacaggc cgcgcacctt gttcagcacc agggtggcga gggcttctcc ttccacgtcc
     2041 tccgcgacga cgagcagggg gcggccgagt ttggccacct gttccagcag cggcagcatg
     2101 tccttgagcg agacgatccg cttctcgtgc agcagaacca gcggattgtc gaggactgct
     2161 tccatcttgg ccggatcggt gacgaagtag ggcgagagat acccgcggtc gaactgcatg
     2221 ccttccacca cttcgagggt ggtctcgatg cccttggctt cctccaccgt gatggcgcct
     2281 tccggaccga cccgctcgac cgcgtccgcc accatggccc cgatttgcgg atcgttgtgg
     2341 cccgagatgg tggcgacctg ctcccgctcc cgccggctgg ccaccgggcg tgacagctct
     2401 ttgagcgcgg tgaccgccgc ggtcagcgcc cgatcgagtc cccgcttgag gtccacggca
     2461 ctggcgccgg ccgccacgtt gcggagcccc tcggcgaaaa tggcgtgggc cacgagggtg
     2521 gacgtggtgg taccatcacc caccacgtcg ccggtgcgga cggccgcctc gcgcaggacc
     2581 tgggccccca gattctcctc gggatcctcc agatccacct cgcgggcgat ggtcacgccg
     2641 tcattgcaga tcaccggtgc tccccacttg cggcccacca gaacgcactt ggatttggga
     2701 cccagggtca cccggaccgc atcagccagc gcggtcgcgc ctcgaagcac cttctcccgg
     2761 gccgaggccc ggaacaacat cgccttgtgt gccataccgc ctctcctgtc ctatcacgct
     2821 ggcagatgtc cgcaggctat gaagtccgcc taacggaacc gcagcagtgc cgcgaacccg
     2881 ttcagcttcc ggccgagttc tggttcaccg accatcacga tcttgacgtc ctgccgcaga
     2941 gcgtcttcga tcgactcgtt caccaggtcc tgcagcggaa ccggcgttcc ctcgtcctgg
     3001 cagtcggcgg gggagatgac cagccggccg gccccgccgc agcggaaccc cggcagggtg
     3061 tgtctggccc ggaggaagag ggtccgtacc tggccccgcg cgagtgcgcg aagggtgggg
     3121 cgagcgccgg tcaccgccca tcccgtgtcg agcgatgcct cgagctccgc taccaggtgc
     3181 tgctcccgct cgatctcggc gtccgctcct gcctcgatca ccatctgacg gatctgggcc
     3241 ggcgtcaccg ccgtgggatt gagacgggac ataccgatca cctggtgccg aagcggttcc
     3301 gggagggcct ggagcagctc gctggtcgcc cggatgggtc cgcccaggaa gatgccctgg
     3361 gctccggtct gggtgacccg cagaatcagc tcctccgcca ccacggccgc atgacggcgc
     3421 cgctcttcca gcatccgatg gtggaaatgg gactcgcccc agcccgggga atcctgacga
     3481 tcgctgtgga atttgccgcc gcgggtggcc gtggcggtaa cgccaggcag ctcgcggact
     3541 tcgaacgagg tgacctggaa aaagcgcgcg tgggtgcggt cgatggccgt cgccacgacg
     3601 gtcccgacct cctgggcccc ggcgagcagt tcggccaccc gaggccgggc gtcgagctcc
     3661 acccgggtgt gcagcacccg cgatagcggc acggcttcaa acaggccgat cgcttcgctg
     3721 acgaagagcg ccaggcctga agcgtgagga agctgctcga tgtccgcgag gtattcgcgg
     3781 atgcggtcaa agtcccgctg cagcattgcc cgatcgtcat gggccatgcc ggcctgctcg
     3841 atcaccagtt caagtcgctg caacgctccc cgcaccgtga tcgcatattg ggagcgggtg
     3901 cggtcctggg gccgcagcgg gacgtaacag gtaatgacca gcggtcgggg ggctttcaga
     3961 ccggcgaggc gctcgatcag tgcctgtgag ggagtggcga cttcgattcc cctggctgtc
     4021 atgttcgact cctgcctttg tcggagctct aacgcatcgt ccggcgcccg aacgggttct
     4081 ggttgtccat cgacaaatat cccccgggcg ttcccaagcg gcattgagga agaattgaat
     4141 cttgacttag aaagctgcgc gcgatattcg ggcttcatcg ccgctccagg ttgcgaggcg
     4201 gccggcggga ggttttcagc ggaagtgggc aaacgcagcc ggggcgacct gtttgctgac
     4261 aggccgcccc ggttcgcgcc ggttacccgg agtcgtgggc tttcaccctc gttcttcttc
     4321 cctccgccgc cgcccacctg aatgtcgcgg cttggcgtcg ggagctccgg cttcaatccc
     4381 cacgcggttt gctgtcgcgt ggttcgccgg cgtgggcgct gccagtcaac cgaatcgcgg
     4441 accagtctct ggcactgcac gccgttacgc cgcctcggcg tggatgaggc gcgcgatcgg
     4501 cctcaccgct gccgaatcaa gcccatgcac gagctcgaaa cggcaaaacc caatctcgca
     4561 ggcgaggcat gaaccgagac tgaaaccagc gtgaagcttt tcggatggaa aggtcctggc
     4621 gcgctgtggc tggcgtgggc ggtagctttc cgccgcatcc cttggcggag ggccgagtga
     4681 tctgggccta cacgctcgcg agcgtcgggc tggtgagtct cattccgctg gccggcctgc
     4741 tcctgttgcg ggaacggacc gaacgggtgc ggcgcctggc gctgtggctg gtcagctttg
     4801 ccatcggtgc gctgctgggc ggggcggtgc tccatctgat tcccgaggcg ttcgagcggc
     4861 tgggatccgg cccgggtctg tcgctgtatc tgctggccgg gttcctgggt ttcttcgtgc
     4921 tcgagaagtt cctctggctc cacggtcaca atcgccgaat tgtgtcgccc gatcggcttc
     4981 agccggtggc gttgctcaac ctgatcgggg acgggctcca caatctgctc gacgggatga
     5041 tgatcgcggc agcctactca gccgagacct ccgttggcgt ggcggcgacc gtggcggtcg
     5101 tcctgcacga ggtaccgcag gagatcggtg actttggcgt gttgctttac agcgggttgc
     5161 cgatccgccg cgccgtgctc ttcaacttcc tgtctggtct cgcggcgctc gctggagcgg
     5221 ctatcacgct ggcaatcggg cgattcgcgg ccggatccac cgatgcgctg cttccaatcg
     5281 ctgccggagc cttcatctat gtcgccgcat ccgacctggt gccggagctg cggcgcgagg
     5341 agagccgctc ggcgaccctg gggcagatcg ggctggtcct cctcggcatc ggcatgatgg
     5401 cgctgcccag gctcctggag tgaactcacc gggaactccg gttcactggt acaggatgta
     5461 gaccggccgg ggccgtagcg ccagcacttc cttcggggtc atcagaggac ggtcaagcca
     5521 tggctgggta aacagtttga aaccagtgaa ctgcaccgct tcgcgggcga cgatcgagcg
     5581 gtaggtagct cgcttctgac tcttggtgcc aaatccgtcc atgtcgatca cgacctggac
     5641 ccgcgggtcc acccggatgc tcccggcgtt ggtcagcatg gcggtggtga accggtggac
     5701 cacgagcacc ttcggcggca gcccgagcga gtcgaccaag cgggcgagca gggcgatggc
     5761 cccgttcact tcggtggcgt ccatcgttcc gatccggcgg cccggcgggg tgtcgtcctt
     5821 catggcgaac tcgggatcga gggcgaggtg aacgtagggg cggctgagcc acggcaggag
     5881 ccgggcgatc tccttcgcca gggagctgtg ccctacctgc agatcgagga ccagcaacca
     5941 cccccgcgct tcggcccacc cggccactcc ctcgatcgtc tgggacgaat actgaccccg
     6001 atacagccgc tccacgccag gggcgcgctc agcgcaggtg gcgatgaggt gaagtgccgg
     6061 tcgcaccggg gtcgtgggat cggtggcggc ccaccgttcg gcggtgcgcg ccaactcctc
     6121 cagcatgatg gccggcggga gcgcgcccag aatcccgagt ttcgcggagc gaggattgcc
     6181 atagaaggcg acgatccgat gcccgggcag cagggcgccc ggtcgctcct ggaccttggg
     6241 cccggtcgat ccggcaggtg cgagccacaa cacgagcgcc aagccggtac cggcgcggag
     6301 ctggctcagc cgactcgccg gtctgctcaa gtgcgtcatc ctgccctctt cacgggtgct
     6361 cctcacggac gtcatgaaga caagttaggg actgggctgg aaggagcgat gaaagagacg
     6421 tgatggtcga ggaatctctg cgcaggctgg agtgcaccag ccggtcggtg aaggaggttt
     6481 gttcgcactt tcaagcgtgc ttcaccaccg cagcatgatc ttcgattggt tccggtgcct
     6541 ttgtgcccac aacggaccat tgtaccgggc gcccaatgtt ctcaggggag gggatatgtt
     6601 gagcaacgtg gagatgcaga aaaaggtgct cgaagccctc gatttcgagc cgagcctcga
     6661 cgcgacgcac atcggcgtag cgaccaatga cgggatcgtc acgctcacgg gacaggtccc
     6721 gtcgtatgcc gacaaggtcg cggcagagcg ggcggtgaag cggatatttg gggtcaaggg
     6781 gatcgccatc aacctggagg tccggctggc aggagacgca cggcgaagcg atagcgacct
     6841 ggccgccgcg gcggtgcgag cactcgaatg ggacgtgcag gtcccgcacc agcggattca
     6901 ggttcgggtg gccgacggat gggtgaccct ggaggggtcg gctgactgga actaccagcg
     6961 ggagtccgcc taccgggcgg tccggaacct caccggcgtc cggggggtca gcaacctgat
     7021 tgcgctgacc aagaaggtga tgccggggga tgtccagagc cgcatcgaga aggcgctcaa
     7081 gcggactgcg gagttggaag cccgtggcat ccaggttcag accaccggcg gcaaggtcgt
     7141 cctcgagggg aaagtccaca gctgggccga acgggaagag gccgagaatg cgtcctggtc
     7201 ggcgcccggt gtcacggagg tcgtggatca cctggttgtg accgcctgag gcggtaagga
     7261 cagccggctc cgcgggggtg gttcagtcgg ccacccccgc gcgaagccgg cagccgcgtt
     7321 ctgcggccga accggaaaag catatgcctg acggaccaaa gaagttcgac aaccgacgcc
     7381 ggattcggac cgcggcggcc aaacggttcg cccggaccaa gatccagaaa accgaccgca
     7441 agcagacggt ccgccaggtc ggacgccggc gcggtggata ctgagaccat gtcccggact
     7501 gcgaccatgc cggtgtggga ggtcatgtcc ccctcccccg tgacggtgca tcccgacact
     7561 ccagtgcggg tcctgatcgc cctgttcgag cgtctcgatc acaacgcgtt tccggtggtg
     7621 gatgctcggc aggtgctgtg cggtctggtc accaagctgg atctgttgcg gctgttgcga
     7681 cctgatgccg agttccgggt ccccgatttc gccgacgtcg cgggctgtca ggtcagccag
     7741 atcatgcggc gtggcgtggt gacagtcgag ccggatgatc cggcggccgc ggcagcggac
     7801 ctgatggtga ccaccggtct caggagtctg ccggtggtcg agcggaaggc cggtccgccg
     7861 gttctgatgg gaatgttgag ccggggcgat ttgctgcggg gtctctgggt ggagagcggg
     7921 ggagcgagcg ccgccgtaac gccgctcgcc gcccaaaccc ggccccagga gtaacctccc
     7981 actgggtcac tccatcgctc gcccgcattc cggggagggt gtgcgccatc ccgtgtccaa
     8041 gcagcaagcc cgccagtagt aatcgcttca taccctgcct cccccatcct ccgaccggcg
     8101 ctctacaccg cgaccagttg tccggcctct ggcagggagc ggaccatctc acggaatgcc
     8161 ggccactcca ccgcgcccca cacttccgtg tgcgcatgcc cggcaatccg gacgagcgtc
     8221 gcaacccgca cggcggtttc aagatctggc gcggcaaata catccaggta atcgtgcggc
     8281 cccaggacgg cccagctgtg cagccagcgc acctgcgggc actcggcgtg gatcgcgttc
     8341 atggccgcgc gctcgagcac ttcatacccc tgggggtgtc ggaccgcctc gggtgacagg
     8401 cgggtaagca tgacgaacgt ctgcatagta cgaccctcct tcgttccctt gttcgcggcc
     8461 cggctcctcc ccccggccct tcgtcggcgg taggatcagc tttccggctg gtggctgcga
     8521 cggcgacggc cccgaaacac cggagccacg gtggtcgcct gagggccctt ctcccccggc
     8581 tcttccacga agcggacctc caagccgacc tcgagacgat cgaacgcctc gtcctgaaca
     8641 ctgttacggt ggaagtacac ctcacgtcca tccgcggtct ccaggaatcc gtatccctcc
     8701 caggggaaga gcagccggac ccgaccgtgc ggggtcactt ccggggcgcc aacctcgccg
     8761 cgttggattc gggcgtggtc ttccagttgt cgcctggatg cgtcgaacgc gcgctggacc
     8821 gcggtcagca actcctcatg agtctggcgg gtggtgggga gcccgccgtt cggcactgtg
     8881 agatcgatcc gtaccccata ggctacgacc tcgccggccg gaaagcggtg ctccgcgtcc
     8941 agcagcacac ggcagtttat gatgcgcggg taaaactgct ccagtttcgc cacttcccgt
     9001 cggatgaccg cttcgacatc ctgcgacagc gcaaggttgt gtgccgtgat ctgcagtggt
     9061 tgttccatgg taccatcctc tcctcccgta cggccccaat gctccggtca ccggaaagtg
     9121 cgcgcgacga catgaagcct ctatgaaccg ggtgcgaacc tggcgatgcc aagcgcgctt
     9181 ccaagacacg aacagtcagc ttcagaccag gctcattcat gcttcacccg aacaggatta
     9241 gtctgggcgt ggcctcgtca ccgagggacg cccgtgatgg ccactgccac gaccacctgg
     9301 ccgccgctga tcgacccggt accaacggaa gcatctccca ccaatctggg tgactacgag
     9361 gccacgcgtg ggagtttctc gtggggatcg gcccgccgcc agcttgccgg gctgcccggt
     9421 gggggtctca acatcgcgtg ggaggcggtt gggcatcatg cagccggccg tcttgccgac
     9481 aaggtggcct tgcggtgcct ggggaaggat ggctccagac aggaattgac ctttcgcgat
     9541 ctcgatcgcc tgtcgagccg cttcgccaac gccctcgcgg atctgggtgc cgggcgaggc
     9601 accagggtct acgttctggc tggtcgaata cccgagctat acgccgcggt gctcggtggt
     9661 ctcaaacacg gctgtgtggt ctgtcccctc tttgcggcgt ttggacccga acccatccgg
     9721 gctcgcctgg ccatcggccg gggtgaggtg ttggtcacga ccgccccgtt gtatgagcgg
     9781 aaaatcagcg ggatccgatc cgaccttcct gccctgcagc acgtgatcct catcggcgag
     9841 gatccagtgt cgcccggcca gggaatccac cgctggtcgg cgctcacgga gcgcgttcgg
     9901 gacgagtacg ccattccccg aagcacggcc tcggatttgg cgctactgca cttcaccagc
     9961 ggcacgacgg gacggcccaa aggagcgatg cacgtccatg gagcggttat cgcccatgcg
    10021 gcgaccgcac gaacggcgct ggacttgaga ccggaggacg tcttctggtg cacggccgat
    10081 cccggttggg tgacggggac gtcctatggc atcatcgctc cactcgtcct gggcgtcacc
    10141 agcattgttg acgaggccga ctttgacctc gaacgctggt gctccatcct ggagcgggaa
    10201 ggcgtttccg tgtggtacac cgccccgacg gcgattcgaa tgatgatgcg ggccggtctc
    10261 gagccgttcc ggcgccgacg gtttcctcat ctccggttcc tcgccagcgt aggagaaccg
    10321 ctgaaccccg atgccgtggt gtggggccgc gatgccttcg ggcacccgtt ccacgacaac
    10381 tggtggcaga ccgagaccgg gtccatcatg atcgccaact tcgcgggcac cgaaatccgc
    10441 cccggaagca tggggcgccc tgtgccggga atcgaggcgg gcatcgtgcg ccgggagggc
    10501 gaaggggtcg aggagattcg ggaacccggc gtagagggtg aactggcgct ccgcccgggg
    10561 tggccgtcca tgtttcgtgg ctactgggag gatcccgacc gcacgaccgg gtgttttgcc
    10621 ggcggctggt atctcaccgg cgatctggct cggcgggacg aggacggata ctactggttc
    10681 gtcggccggt cggatgacgt gatcaagacc tcggggcacc tggtcggtcc gttcgaggtc
    10741 gaaagtgtgc tcctggctca tcccgcggtg gcggaggcgg ccgtcatcgg caagccggac
    10801 cccgtcgccc tggaaatcgt gaaggcattc gtggccctca agccgggaca tgccggcgat
    10861 gacgggttgc gtcgtgacct tctcgggttc gcccggtccc gtctgggcgc ggtcgtggcg
    10921 ccgaaagaac tggtgttcgt cgattccctg ccgaagacgc ggagcggcaa gattctgcgt
    10981 cggctgctca aagcccgcga gctcgggcta ccggagggtg acatctccac cctggagggc
    11041 atgccgtgac cgtcaccgct gctatgccag tcggggcccc gcccggtcga gatcacgccc
    11101 gggatttgct cgcccggatg ctgctcatcc ggcgattcga ggagcgctgc atcgagctgt
    11161 acagccagga gaagatccgg ggcttcctcc atctgtatat aggagaagag gcggtggcgg
    11221 tcggggcgat gcaggccctc acggccgacg acgccgtagt ggcgacctat cgcgagcacg
    11281 gccacgccct cgcccgcgac atctcacccg gtgtgatcat ggccgagatg ttcgggaagg
    11341 tttccggctg cagccgcggc aggggcggct cgatgcatct gttcgatgcc gccaggcgat
    11401 tctacggcgg ctacgccatc gtggggggcg ggcttcccat cgctgtgggg ctggccctgg
    11461 ccgaccggct gcaagaccgg cccgggatca cggcgtgctt cttcggcgac ggcgctgtgg
    11521 ctgaaggcga gttccacgaa tcgctcaatc tggccacgct ttggaaactc ccggtgctct
    11581 tcctctgcga gaacaaccgc tacgccatgg gaaccgccat cgagcggcat caggcctcga
    11641 ccaacattgc agccaaggcc tcggcctacg gcatgaccgg tgagcaggtc gatggcatgg
    11701 acgtcctggc ggtggaagcg gcggtgcgac aggcggccca gcaggtgcgt ctgggcaccg
    11761 ggccggtgct cctcgagctg ctcacgtatc gcttccgggc ccactccatg tacgacccgg
    11821 agctgtaccg cagcaaggat gaggtgcgcc gatggatgga acgggatccc atcgcgacct
    11881 tcaccgcgcg tctccgccag tggaacctgc tcgacgacgc ggggctccag gtcctggagc
    11941 gggaggcgca ggccgcggta gccctggccg ttgaggaggc ggagcggggc gggcttgagc
    12001 cggtggaaga ggtgctccgt cacgtgactt tggaggcgac cagatgagtc gtatcacgta
    12061 ccgggaagcg gtgcgcgcgg cgctggtgac cgcgttggag aacgaccccc gggtctttct
    12121 catgggagag gatgtcggtc gctatggagg ggcgtacgcg gccagtcacg gtttgctcga
    12181 ccggttcggc cccgatcggg tgcgcgacac cccgctctcg gagtctacgt tcgtcggcgc
    12241 cggcgttggg tccgcgctgg ggggcatgcg gcccatcgtc gagatcatga cagtcaactt
    12301 cagtctgctg gcgctggatc agatcgtgaa caacgcggcc accctccgcc acatgtcggg
    12361 tggccaactc ggcgtgcccc tggtgatccg gatggccacc ggcgccggtc gccagcttgc
    12421 ggcgcagcat tcgcacagtc tcgaaggatg gtacgcccac gtgccgggcc tccgggtggt
    12481 ggccccggcc accgtcgccg acgcggccgg gatgttgctc gccgcgctgc gcgagcccga
    12541 tccggtcatc atcttcgagc atgcgtcact ctatcccatg gaaggcgatg tggccgagcc
    12601 gctggccccg gccgacctgg tgcaggccgc gctccgccgc gaaggcgatg atgtgacgct
    12661 gatagctcat ggctactccg tgtggaaagc gctcgcggcg gccgatgagc tggcacacga
    12721 tggcatctcg gccgaagtga tcgacctccg catcctccgg ccgctcgacg acgccacgat
    12781 gctcgcctcg gtgcgcaaga cccatcgggt ggtcgccatt gatgaggcat ggcgcaccgg
    12841 cagcctcgcg gccgaggtgt gtgcccgcat cacggagcag gctttctacg agctggatgc
    12901 accaccggcc cgggtctgca gtgccgaggt tccgatgccc tatgcccggc acatggaaga
    12961 ggcggcgctg ccccaagcca cccagatcgc tgccgccgtg agggcgatgc tcgggagccc
    13021 ggtccgtggc tgagttcgtg atgccatctc tcggcgcgga catgcgggcc gggcgactgc
    13081 tcgagtggct caagcagccg ggcgaccggg tcacccgggg cgatatcatc gcggaggtgg
    13141 acaccgacaa gggggtcatc gaggtggagg tctttacctc cggcgttgtg gagcggttgc
    13201 tggtggagcc gggcactcgg gtgccggtgg gaacgccgct cgccaccatc cgggaagagg
    13261 gcgtgcctga agccgcgccg gccgcggccg gtccgcccgg cgttccggcc ccacccgaac
    13321 gtcatcgggc ttcgccgctg gcccgtcgcc gggccgccga gctggggctc gacctcagga
    13381 cgattgcggg aagcgggccc agtggcgtgg tgacccgcga ggatgtggag cgtgcgtcgc
    13441 gagcgccggc ggcaccaccc gaggaggccg gggaggtcga ccgaaccgcc cgcatgcggg
    13501 ccgccattgc cgccgccgtg tcacgctcca agcgggagat cccccactat tacctcgcga
    13561 ccacggtgga tctgggtggc ctgatgacgt ggctggccga ctataaccgc aaccgcccgg
    13621 tggcggagcg gcttgggccc aatgccctcc tgctcaaggc caccgcgctg gctctcagag
    13681 acttccccga tctaaacgcc caatggctgg agggtcgtgc ggtcccggcc caggggatcc
    13741 atcttgggtt ggcgatttcg ctccggggtg gcggactggt cgtggcgacc ctgcccaata
    13801 ccgatcagcg gccggtgtca caactcatga ccgatgtcat ggaagtggta cggcgggcgc
    13861 ggaccggtgg actgcgcagc tcggaactga gcggctccac cgtcaccgtc acccagctgg
    13921 gcgaccgggg tgtcgaatcg gtattcggcg tgatttaccc accccaggtg gcgatcgtcg
    13981 gattcgggcg ggtggtggag cgtccctggg tcgtgggggg acaggtggtc ccgcgtcccg
    14041 tcgtcacggt taccctggcg gccgaccatc gtgcgagcga cggccatcgc ggagggctgt
    14101 ttctcttcgc attgtcgggc ctgttgcagg agccggaacg gctgtgatcc ccgctgatgt
    14161 caggtccgcc gtgttgcgtg ccctcgggtc ggtggccccg gaagccgatc tcactcggct
    14221 cgaccccggc aggcccatcc gcgaccagct ggacatcgat tcgatggact tcatgaactt
    14281 tctgctggag ctcgaccgcg agcttcacgt ggacgtgccc gagatggatt atgcccgggt
    14341 cgctacgctg gatcagtgtg tcgcctacct gtctgcgagg ctcgaaacat gacacctgcc
    14401 ttcgtcctct cgtctccggg ctttacgcct gacggttcca ttccttcgaa atacacctgc
    14461 gacgggaccg atcattcccc gccgctggcc tggggtggcg cgccggccgg cacgaaga
//
LOCUS       DASWKS010000038         5760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1867188, whole genome shotgun sequence.
ACCESSION   DASWKS010000038 DASWKS010000000
VERSION     DASWKS010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5760
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867188"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /gene="pyrH"
                     /locus_tag="VGA78_01335"
     CDS             complement(<1..576)
                     /gene="pyrH"
                     /locus_tag="VGA78_01335"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX9892528.1"
                     /translation="MPLAYRRALLKLSGEALAGERGLGLDYSVIERLADEIRTAHGRG
                     VQLGLVVGGGNMVRGARASKEGLDRVSGDYMGMLATVINALALQDVLERFGLATRVMT
                     AIRMESVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFSTDTAAVLRALEIDAEVILKA
                     TNVDGIYTEDPKTNPAATFIPELTFQQALVEG"
     gene            complement(576..1463)
                     /gene="tsf"
                     /locus_tag="VGA78_01340"
     CDS             complement(576..1463)
                     /gene="tsf"
                     /locus_tag="VGA78_01340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX9892529.1"
                     /translation="MTQTIAAKDVAELRARTGAGMMDCKKALEEAGGDMGRAAEILRA
                     KGIAKAEKRAGRTTSQGVVAALLLPDGSAGAMVEVTCETDFVARNDDFQKAVSELLNQ
                     VMATEPMGLEAFLAQPAAGPHGQTVADQVKELTAKTGENVALRNAVKYAPGHSGAVGL
                     YLHHNRQVGVLVELECGSEGVARGSGVQELARELALHIASADPIAVRGEDIPAEVVDR
                     ERRIAEEQVTAEGKPEAVRGKIVEGKIKKFLSERALLNQLWVKDDKKTIGQLVDAVSK
                     PLGDAVTVTRFTRLKVGES"
     gene            complement(1573..2457)
                     /gene="rpsB"
                     /locus_tag="VGA78_01345"
     CDS             complement(1573..2457)
                     /gene="rpsB"
                     /locus_tag="VGA78_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEX9892530.1"
                     /translation="MTGTQPQVKDLLEAGVHFGHQTRRWNPKMRRFIFAERSGIYIID
                     LQKTVRQIQKAQELLRNVVMRGDNVLFVCTKKQLKALVKAEADRSGAFYITERWLGGT
                     LTNFQTIKKQIRRLRDLEQGGDSGEFANYTKKERLLFERERVKLSRNLEGLKNMGRLP
                     GALFVVDAKKEKIAIAEANKLGVPVVAIVDTNADPDLITVPIPGNDDAIRSVALITAA
                     LSDVIHETRMQAPARESSEDTDAETYSTDAGTEGDVDAERRKRRPARKRRPKPEAIAA
                     RLKADVPEGTSPATSDAS"
     gene            complement(2650..3054)
                     /gene="rpsI"
                     /locus_tag="VGA78_01350"
     CDS             complement(2650..3054)
                     /gene="rpsI"
                     /locus_tag="VGA78_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013938599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEX9892531.1"
                     /translation="MTSTTPEFRWHAVGRRKTSVARVYLTPGTGKWDINGRTLGDFFP
                     RGSLVTHIQQPFTTTDTLGAFDVRARVNGGGQTGQAGALRMAIARALCAADEMHRTKL
                     RANSLLTRDPRAVERKKPGRPGARKRFQFSKR"
     gene            complement(3051..3494)
                     /gene="rplM"
                     /locus_tag="VGA78_01355"
     CDS             complement(3051..3494)
                     /gene="rplM"
                     /locus_tag="VGA78_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019309628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEX9892532.1"
                     /translation="MKTFTATPADISHDWHVVDAQGVPLGRLATMVAQLIRGKHKPTF
                     TPHMDGGDFVVVVNAAKVKLTGTKMDQKRYFRHTGYMGHERFTAAKDMLAKHPERIIE
                     KAVHGMLPKNSLAKQKLRTKLKVYAGPSHPHSAQQPKPYPTKVSA"
     gene            complement(3585..4097)
                     /locus_tag="VGA78_01360"
     CDS             complement(3585..4097)
                     /locus_tag="VGA78_01360"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9892533.1"
                     /translation="MKYFVSLAGRTHEVLVESGGVVLNGRVHQAQLELVPGTPLCHLI
                     LDGRSFCFAVSPEAPGEWNLLDAGETVAVEVLDERTRYIRSLAGGGKTHLTGGAVKAP
                     MPGLVVKLLVGPGDQVKAGQSLVVLEAMKMENELKAPGAGLVAAVSVKPGQAVEKGQP
                     LVLLQPVPPA"
     gene            complement(4094..5308)
                     /locus_tag="VGA78_01365"
     CDS             complement(4094..5308)
                     /locus_tag="VGA78_01365"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX9892534.1"
                     /translation="MTAPVRILRIAAGGDGVGRLADGRTVFIPRTAPGDLVDPAEVRL
                     HARFARARLGRLLAPGADRIEPPCRHYDADSCGGCQLQHLGREAQRTARRAIVGDALR
                     RIGRLDTPDPVLEAGAEELHYRTRITLALDPAGRRAGFHRLGEADEVFELERCEIADE
                     RLNQLWFVVRNASGEWPPALRQIVLRVGRDGSAHLIFRGPVRPDLHLTRRIDAAIWWE
                     PPDQPPRLVSELAVAAGVIPPGVFEQVHPAMASRVRDYALAQLGPVARHHVWDLYAGV
                     GETSAALATAGATVESVEVDQDAVQVAEQRGPRQGVTRYLGRVEDWVAQLRRPDAVVT
                     NPPRTGMDPRVVRDLASARPRLLVYISCDPATLARDLAGFRERYRVDDVRAFDLFPQT
                     AHVETVVRLEVR"
     gene            complement(5305..>5760)
                     /locus_tag="VGA78_01370"
     CDS             complement(5305..>5760)
                     /locus_tag="VGA78_01370"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014804.4"
                     /note="catalyzes the ATP-dependent carboxylation of a
                     covalently attached biotin and the transfer of the
                     carboxyl group to pyruvate forming oxaloacetate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEX9892535.1"
                     /translation="LPSTGRISYLRAPGGPGVRWDAGFEAGDEVSLFYDSMIAKLIVF
                     APDRITAIARMRRALNELVVLGVATNQGFHTRLFADPSFRAGEVDIQFLERRADLLRP
                     VADEARDLPLAVAAALLEDRRRHGLKLSVGPGESGPNPWLDAGRRDGLR"
BASE COUNT          876 a         2039 c         1851 g          994 t
ORIGIN      
        1 cccctcgacc agcgcctgct ggaacgtcag ctccggaatg aaggtggccg cgggattggt
       61 cttcggatcc tcggtgtaga tcccgtccac gttggtggcc ttgaggatga cctcggcgtc
      121 gatctcgagc gcccgcagca ccgccgcggt gtcggtggag aaaaagggat tgccggtgcc
      181 ggcggcgaag atgaccaccc ggcccttctc cagatgccgg atggcgcggc gccggatgta
      241 tggctccgcc accgactcca tgcgaatcgc ggtcatcacc cgggtggcga gcccaaagcg
      301 ctccagcacg tcctgcagcg ccagcgcgtt gatgaccgtg gccagcatgc ccatgtaatc
      361 gcccgacacc cggtccagcc cttccttgct ggcccgcgcg ccgcgtacca tgttgccgcc
      421 acctaccacc agtcccagct gcactccccg gccgtgcgcg gtgcggattt cgtccgccag
      481 ccgttcgatg accgaatagt ccagacccag gccgcgctcc cccgccagcg cctcacccga
      541 cagtttgagc agagcccggc ggtaggccaa gggcatcagc tctctcccac cttgagccgg
      601 gtgaagcggg tcacggtgac ggcgtcgccc agcggcttgg agaccgcgtc caccagctgg
      661 ccgattgtct tcttgtcatc cttcacccag agctggttga gcagcgcccg ctcggacagg
      721 aacttcttga tcttgccctc gacgatcttg ccccggaccg cttcgggctt gccctcggcg
      781 gtgacctgct cctcggcgat gcggcgctcc cggtcgacca cctcggccgg aatgtcctcg
      841 ccccgcaccg cgatcggatc ggccgaagcg atgtgcagcg ccagctcacg cgccagctcc
      901 tgcaccccgc tgccccgggc cacgccctca ctgccgcact cgagctccac cagcaccccg
      961 acctggcggt tatggtgcag gtacagtccg accgcgccgg aatgaccggg ggcgtacttc
     1021 accgcgttgc ggagcgccac gttctcgccg gttttggcgg tcagctcctt gacctggtcg
     1081 gccacggtct ggccgtgggg cccggccgcc ggctgggcca ggaacgcctc caggcccatc
     1141 ggctcggtgg ccatcacctg gttgaggagc tccgaaaccg ccttctggaa gtcatcgtta
     1201 cgggccacga aatcggtttc gcaggtgact tcgaccatgg ctccggcact gccgtccggc
     1261 aggagcaggg cggccaccac gccctgcgag gtggttcggc cggcccgctt ttcggccttg
     1321 gcgataccct tggcgcgcag gatctccgcc gcccggccca tatcgccccc ggcctcttcc
     1381 agggccttct tgcagtccat catgcccgcc ccagtccggg cgcggagctc cgccacgtct
     1441 ttcgccgcta tcgtctgcgt cataatcctg tccctaagaa aaccgccgct ccgggccttg
     1501 tgccagagag cggcggatga tggatcctgg gcggcgggaa ccgcccgcct gcccgcctgc
     1561 ccgcccgtcg gcctaggacg cgtcgctcgt cgccggtgac gtcccctcgg gaacatccgc
     1621 cttcaaccgg gccgcgatgg cctccggctt gggccgccgc ttacgggccg gccgacgctt
     1681 gcgacgctcg gcgtcgacat cgccttccgt gcccgcgtcg gtgctgtagg tctccgcgtc
     1741 ggtgtcctcg gacgactccc gtgccggggc ctgcatccgg gtttcgtgaa tcacatcgga
     1801 caaggccgcg gtgatgagcg ccaccgaccg gatcgcgtcg tcgttgcctg ggatcggcac
     1861 cgtaatgaga tccggatcgg cgttggtatc cacaatggcg acgaccggca cccccagctt
     1921 gttggcctcg gcgatggcga tcttctcctt ctttgcatcc accacgaaca gggccccggg
     1981 caaccggccc atgttcttga gtccttccag gttgcgggac agcttgaccc gctcccgctc
     2041 gaacagcagc cgttccttct tggtgtagtt ggcgaactcg ccgctgtccc cgccctgctc
     2101 cagatcccgc agccggcgaa tctgtttctt gatggtctgg aagttggtga gggtcccgcc
     2161 cagccagcgc tcggtgatgt agaaggcgcc ggagcgatcg gcctccgcct tcaccagtgc
     2221 cttcaactgt ttcttggtgc agacgaagag aacgttgtcg ccccgcatca ccacgttgcg
     2281 caacagctcc tgggctttct ggatctggcg cacggtcttc tgcagatcga tgatgtagat
     2341 gccggaccgc tcggcgaaga tgaaccggcg catcttggga ttccagcgcc gggtctgatg
     2401 tccgaagtgt acgcctgctt cgaggagatc cttgacctgc ggttgtgtgc ccgtcattac
     2461 gcttgtcgtc acgcgctgct gtttccttcc atgagggttg gttccgccac cgccatcatc
     2521 tcgttcgctg acccgtaggc accctgcgat ccgatccggc gatgtgtgta ttcggtcggt
     2581 cggtcggtat gttggtcagg tcggtcgggt cggaccgact ggccgaccga ccccggaccg
     2641 gctgacaacc taccgcttac tgaactggaa ccgcttccgc gctcccggcc ggcccggctt
     2701 cttccgctcc accgcgcggg gatcgcgggt cagcaggctg ttggcccgga gtttggtgcg
     2761 gtgcatttca tcggcggcgc agagcgcccg cgcaatcgcc atccgcagcg cgccggcctg
     2821 gccggtctgc ccgccgccgt tgacccgggc ccggacgtca aaggcgccca gagtatcggt
     2881 ggtggtgaac ggctgctgga tatgcgtcac cagcgagccg cgggggaaaa aatcacccag
     2941 cgtgcggccg ttgatgtccc actttccggt ccccggagtc agatacacgc gggcgacgct
     3001 ggtcttgcgg cggccgacgg cgtgccaccg gaactcgggg gtcgtactgg tcatgcgctc
     3061 accttcgtgg ggtagggctt gggctgctgg gccgagtgcg gatggctggg tccggcgtac
     3121 accttgagtt tggtgcggag cttctgtttg gccagcgagt tcttgggtag catgccatgc
     3181 acggccttct cgatgatccg ctccgggtgc ttcgccagca tgtccttggc ggcggtgaag
     3241 cgttcgtgac ccatgtaccc cgtgtgccgg aagtaccgct tctggtccat cttggtgccg
     3301 gtgagcttca ccttggcggc gttgaccacg acgacgaaat cgcccccatc catgtgcggc
     3361 gtgaaggtcg gcttgtgttt gccccggatc agctgcgcca ccatcgtggc gagccgcccg
     3421 agcggcacgc cctgcgcatc cacgacatgc cagtcgtggc tgatatcagc cggcgtggcg
     3481 gtaaaggtct tcatcagtct cgaatgtccg cgtgatcccg ctttccttcc gccagaaccg
     3541 gatctggcag agcatggaaa actaatttgt agcaaggggt tacgtcaagc gggaggaacc
     3601 ggctggagta gcacaagggg ctggcccttc tccaccgctt gacccggctt cactgacacg
     3661 gccgccacca gcccggcccc gggcgccttg agctcgtttt ccattttcat ggcctcgagc
     3721 accaccagac tctgtcccgc cttcacctgg tcccccggcc cgaccagcag tttgaccacc
     3781 agacccggca tcggcgcctt caccgctccg ccggtcagat gggtcttgcc gccgccggcc
     3841 aggcttcgga tgtaccgggt ccgttcgtcc agtacttcca ccgcgaccgt ctcacccgca
     3901 tccagcagat tccattcgcc cggagcctcg ggcgagacgg cgaaacagaa cgaccggccg
     3961 tccaggatca ggtgacacaa cggcgtcccg gggaccagct ccagttgggc ctgatgcacc
     4021 cggccgttga gaaccacccc gccactttcg accaggacct catgggttcg tcccgccagg
     4081 ctgacgaagt acttcatcgc acctcgagcc gcaccacggt ttccacgtgc gcggtctggg
     4141 ggaagaggtc gaatgcgcga acgtcgtcca cccggtaacg ctcgcgaaac ccggcgaggt
     4201 cccgggccag ggtcgcggga tcgcaggaga tataaacgag aagccggggg cgggccgaag
     4261 ccaggtcgcg gaccacccgt gggtccatgc cggtacgcgg agggttggtg accactgcat
     4321 ccggccggcg gagctgggcc acccagtcct ccacccggcc gaggtagcga gtcacaccct
     4381 gacgcggacc gcgttgctcc gcgacctgca ccgcgtcctg gtccacctcc acgctctcga
     4441 cggtcgcgcc ggccgtggcg agcgccgctg aggtttctcc caccccggcg tagagatccc
     4501 agacgtggtg tcgggcgacc gggccgagtt gggccagcgc gtagtcgcgc acccgggacg
     4561 ccatggccgg atggacctgc tcgaacacgc ccggcggaat caccccagcg gcgacggcca
     4621 actcactcac cagccgggga ggctggtcgg gaggttccca ccagatcgcc gcgtcgatcc
     4681 ggcgggtcag gtggaggtcc ggccgaaccg ggccccggaa gatcaggtgc gccgatccgt
     4741 cgcgaccgac ccgcagcacg atctgccgca gcgcgggtgg ccattcgccc gatgcgttgc
     4801 gcacgacgaa ccagagctgg ttcaggcgct cgtccgcgat ctcgcagcgc tcgagctcga
     4861 agacctcgtc cgcttcgccc aaccgatgga acccagcccg ccgcccggcg gggtcgagcg
     4921 cgagcgtgat cctggtccgg tagtgcagtt cctctgcgcc agcctcgagc accggatcag
     4981 gagtgtcgag acggccgatc cggcgcagcg catcacccac gatcgcgcga cgagcggtgc
     5041 gctgggcttc gcggccgaga tgctggagct gacagccgcc gcacgaatcg gcgtcgtagt
     5101 ggcgacaggg cggctcgatg cgatccgccc cgggagccag caaccggccc agtcgcgccc
     5161 gggcaaatcg ggcgtggagc cgcacctcgg ccggatcgac cagatctccc ggggcggtac
     5221 gcgggatgaa cacggtccgg ccgtccgcca gccggcccac gccgtcacct cccgccgcga
     5281 tccgcagaat ccgaaccggc gcggtcaccg cagtccgtcg cgccgtcccg catccagcca
     5341 gggattggga ccactctctc ccgggccgac cgagagtttg agcccgtggc gacgacggtc
     5401 ctccagcaga gcagccgcca ccgccagcgg aagatcgcga gcctcgtccg ccaccggacg
     5461 cagcaggtcg gcccgccgtt cgaggaactg aatgtcgact tcgccggccc ggaaggaagg
     5521 atcagcgaac agccgggtat ggaatccctg gttggtggcg acccccagca cgaccagctc
     5581 gttcagcgcc cggcgcatcc gggcgatggc ggtgatccga tcgggagcga atacgatgag
     5641 cttggcgatc atcgagtcgt aaaaaaggga tacctcatcg cccgcttcga agcccgcatc
     5701 ccacctcacg ccaggcccgc cgggggcacg gagatagctg atccggccgg tagaggggag
//
LOCUS       DASWKS010000039         1966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_389465, whole genome shotgun sequence.
ACCESSION   DASWKS010000039 DASWKS010000000
VERSION     DASWKS010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389465"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..377)
                     /gene="nuoK"
                     /locus_tag="VGA78_01375"
     CDS             complement(66..377)
                     /gene="nuoK"
                     /locus_tag="VGA78_01375"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX9892536.1"
                     /translation="MTDGMALLGPALGLSAILFSLGVAGVLLRRNVIVLFVCIELMLN
                     AVNLTFVALAQLHGAGGQVMVFFVMTVAAAEAAVGLAIILAIFRHKQSVDLQNINLLR
                     G"
     gene            complement(377..934)
                     /locus_tag="VGA78_01380"
     CDS             complement(377..934)
                     /locus_tag="VGA78_01380"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX9892537.1"
                     /translation="MTEAVFYVFAACAVVTASMCILSRSAMSAVLWLTATMLSLAALY
                     VLLSAEFIAAIQVLVYAGAVMVLFLFVVMLLNLGHPTTDMRGPASVAATIVIAGLLAI
                     QLAALWRYSPARLAGEVAQAPQFSDPATLFAAGRLAREEAVAHGVVGAVAAPLFQVYL
                     VPFEITSILLLAAIVGAVVLAKRRI"
     gene            complement(935..1438)
                     /locus_tag="VGA78_01385"
     CDS             complement(935..1438)
                     /locus_tag="VGA78_01385"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HEX9892538.1"
                     /translation="MKRPDRQVSYVRATLKGMALTFKHMLEKKVTMQYPEQKSTDQDH
                     GGGTYSLSPRWRGTHRMLTDEQGRSKCVACGLCPQICPANCIKLVPGEDEQGNRYPLI
                     YEIDEFRCIFCGYCQEVCPEEAIHVGVHFENSEYSRGRFVYDLERLQSQTHAVSTLWD
                     PSDPEGE"
     gene            complement(1459..>1966)
                     /locus_tag="VGA78_01390"
     CDS             complement(1459..>1966)
                     /locus_tag="VGA78_01390"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HEX9892539.1"
                     /translation="HTEYSAMKFSFFFIAEYANVVTVCAMITTLFFGGWDIPFTDWDR
                     SGGLLPTLVTWLFFFVKVLFWVFVVMWIRWTLPRFRYDQLMALGWKFMMPLALTYIMV
                     MCTAIYLVERVLKVDSPVMGSLILFGLNIAIAFLVFGVLDSGVFIRGSGYRQKVLEAR
                     GTRAAVAG"
BASE COUNT          380 a          646 c          665 g          275 t
ORIGIN      
        1 tccgttgacg aggaaccctg ccagggggag cgccacggcg agccagaccc actgagaagc
       61 gatcatcagc cccggagcag attgatgttc tggaggtcca ccgactgctt atgccggaag
      121 atggcgagaa tgatggcaag ccccaccgcg gcctcggcgg cggcgacggt catcacgaag
      181 aacaccatca cctggccgcc ggccccgtgc agctgggcca gcgccacgaa ggtgaggttc
      241 accgcgttca gcatcagctc gatgcagacg aagagcacga tcacgttgcg ccgcagcagc
      301 acgccggcga cgccgaggct gaagaggatc gccgagagcc ccagcgccgg gcccagcagg
      361 gccatgccgt cggtcatcag atcctccgct tggccagcac cacggcgccg acgatggccg
      421 cgaggagcag gatggaggtg atctcgaagg ggacgaggta gacctggaag agcggcgcgg
      481 ccaccgcccc caccaccccg tgggccaccg cctcttcgcg ggcgagccgc cccgcggcga
      541 agagggtggc cggatcgctg aactggggcg cctgcgccac ctcgcccgcg aggcgcgccg
      601 gcgagtagcg ccacagggcg gcgagctgga tcgcgagcag gcccgcgatc acgatcgtcg
      661 ccgccaccga ggcggggccc cgcatgtcgg tggtcgggtg gcccaggttc agcagcatga
      721 cgacgaagag aaagaggacc atcaccgcgc cggcatagac cagcacctgg atcgcggcga
      781 tgaattccgc gctcagcagg acgtagagcg ccgccagcga gagcatcgtc gccgtgagcc
      841 agaggacggc ggacatggcg ctgcgggaca ggatgcacat cgaggccgtc actaccgcgc
      901 aggccgcgaa gacgtagaag accgcctcgg tcatctactc accctcgggg tccgaggggt
      961 cccagagcgt cgagacggcg tgggtctgcg actggagccg ctcgaggtcg tacacgaacc
     1021 ggccacggct gtactccgag ttctcgaaat ggaccccgac gtggatcgcc tcctcggggc
     1081 agacttcctg gcagtagccg cagaagatgc agcggaactc gtcgatctcg tagatgagcg
     1141 ggtagcgatt cccctgctcg tcctcgcccg gcaccagctt gatgcagttg gccgggcaga
     1201 tctgggggca gagcccgcag gccacgcact tcgagcgtcc ctgctcgtcg gtgagcatcc
     1261 ggtgggtgcc gcgccagcgg ggcgacagcg agtacgtccc ccccccgtgg tcctgatcgg
     1321 tgctcttctg ctccgggtat tgcatcgtca ccttcttctc cagcatgtgc ttgaaggtga
     1381 gcgccattcc cttgagggtg gcccggacgt agctgacctg ccggtccgga cgcttcatga
     1441 ctttcacgcc gatcgccatc agcccgccac cgcggcacgg gtgccgcgcg cttcgagaac
     1501 cttttgccgg tagccggagc cccggatgaa cacgccgctg tcgagcacgc cgaagaccag
     1561 gaaggcgatg gcgatgttga ggccgaagag gatcagcgat cccatcaccg ggctgtccac
     1621 cttgagcacc cgctcgacca ggtagatcgc ggtgcacatc accatgatgt aggtcagcgc
     1681 cagcggcatc atgaacttcc agccgagcgc catgagctgg tcgtagcgga accggggcag
     1741 cgtccagcgg atccacatca cgacgaagac ccagaagagg accttgacga agaagaacag
     1801 ccaggtcacc agggtgggca gcagtccgcc cgaccggtcc cagtcggtga aggggatgtc
     1861 ccagccgccg aagaagagcg tcgtgatcat ggcgcagacc gtcaccacgt tggcgtactc
     1921 cgcgatgaag aagaaggaga acttcatcgc gctgtactcg gtgtgg
//
LOCUS       DASWKS010000040         2798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_390060, whole genome shotgun sequence.
ACCESSION   DASWKS010000040 DASWKS010000000
VERSION     DASWKS010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390060"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..688)
                     /locus_tag="VGA78_01395"
     CDS             complement(<1..688)
                     /locus_tag="VGA78_01395"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9892540.1"
                     /translation="MSAPAIEFKGIRKRFGRLQVLDGIDAVLGSGRVTAIVGPNASGK
                     STLIKCALGLVRPDAGECLVLGASANGGPEYRRRIGYMPQGAPLPDNLTGREVLQLVQ
                     GIRPGEETDEDLLHRFGLGPELDKPVRTLSGGTRQKLNAAIAFLFRPALIVLDEPTAG
                     LDPLASGILKDRVREAVEAGATALLTSHVMSEVEVLADDILFLVDGKAHFHGSMIQLQ
                     HTTGEQRLERA"
     gene            complement(685..1923)
                     /locus_tag="VGA78_01400"
     CDS             complement(685..1923)
                     /locus_tag="VGA78_01400"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HEX9892541.1"
                     /translation="MNVKRLLPLVLAGMVLPGSIPAQTIVSAGGPISSVAEAVRRAAP
                     GDRIVVRAGTYHEGPIIIDRRLELVGEGRPVIRGRGDHTLVLVTADSVVLRGLVLENV
                     QPSQVEDRAALRFEGVRGCRVVDLEIRESYFGIYLAQSEGCRLERNRVRGPGRRQRDA
                     GNAIHLWSANRMDLVDNVVSGHRDGLYFEFVRNTLIQGNTSSGNARYGLHFMFSDSCT
                     YRENLFRRNGAGIAVMYTRRIIIERNRFEENEGATAYGLLLKEIADSRLSDNQLRRNT
                     VGILVDGGGRLEIRGNRFLDNGWAVKLMASSVDNRFERNVFAGNSFDVASNSQSNYST
                     FAGNWWDRYRGYDLDRDGRGDVPFRPVRLFSLLVARHEPAMILLRSSFVDLLDLAERV
                     LPVLTPETLADSAPLMARPQ"
     gene            complement(1934..2389)
                     /locus_tag="VGA78_01405"
     CDS             complement(1934..2389)
                     /locus_tag="VGA78_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEX9892542.1"
                     /translation="MGSRGWLLAAMIGAGCGAPRPASIRYGAVNCQHCHMAVADPRFS
                     AELVTRRHKVYVFDDPGCLAAFVSAGRVAARDVHSLWVSDFLEPDSLLDARRVVFIRT
                     DRIRTPMDSRVIAVRPGARADSLRVALNGVEQTWDEVLAAASAQGQPEQ"
     gene            complement(2389..>2798)
                     /locus_tag="VGA78_01410"
     CDS             complement(2389..>2798)
                     /locus_tag="VGA78_01410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892543.1"
                     /translation="PIIPESIPELRFMPVILGGLLLLGLGAAAAGRRPLLYAWTSALL
                     LLALAGLGDFWRWGYDYGHNLDSTAAIKVPGMAYQPPLIGSRQLLNFQATSWPALGGW
                     AIMVAGFLASAACVVEWKRSRVTPPEAALRRAA"
BASE COUNT          471 a         1008 c          885 g          434 t
ORIGIN      
        1 ccgcccgctc cagccgctgc tcgccggtgg tgtgttgcag ctggatcatc gagccgtgga
       61 agtgagcctt cccgtcgacc aggaacagga tgtcgtcggc cagcacttcc acttcgctca
      121 tcacgtgcga cgtcagcaac gcggtcgctc ccgcttccac cgcttcccgc acccggtcct
      181 tgagaatgcc gctcgccagc ggatccagcc ccgcggtcgg ttcatccagc acgatcaacg
      241 ccggccggaa cagaaacgcg atggcggcgt tcagcttctg gcgcgtgcca ccggacaggg
      301 tgcggaccgg cttatcgagt tccgggccga gcccgaaccg atgcagcagg tcttcgtcgg
      361 tttcctcgcc gggccgaatg ccctgcacca gctgcagcac ctcccggccg gtgagattgt
      421 ccggcaacgg cgctccctgc ggcatatagc cgatccgccg ccgatactcg ggtccgccgt
      481 tggcggacgc acccagcacc aggcactcgc ccgcgtcggg ccgcaccagc cccagcgcgc
      541 acttgatgag cgtcgacttg cctgacgcat tggggcccac gatggcggtg acccgcccgg
      601 aacccagtac ggcgtcgatg ccgtccagca cctgcagccg gccgaagcgt ttccggattc
      661 ccttgaactc gatggccggg gcgctcattg gggccgcgcc atcagcgggg ccgaatccgc
      721 cagggtctcg ggcgtgagca ccggaagcac ccgctccgcc agatccagca ggtccacgaa
      781 actgctccgg agcaggatca tcgccggttc atggcgcgcc accagcagag aaaacagtcg
      841 caccgggcgg aacggcacgt ccccccggcc gtcccggtcg agatcgtagc cgcgatagcg
      901 gtcccaccag tttcccgcaa aggtggagta gttgctctgg ctgttgctgg caacgtcaaa
      961 cgagttcccg gcgaagacat tccgctcaaa ccggttgtcg acgctgctgg ccatcagctt
     1021 cacggcccag ccattgtcca ggaagcgatt gcccctgatc tccagccgcc cgcctccatc
     1081 aaccaggatc cccaccgtgt tgcggcggag ctggttgtcg ctgagccggc tgtcggcgat
     1141 ctccttgagc aggaggccgt aagcggtcgc gccctcgttc tcctcgaagc ggttccgctc
     1201 gataatgatg cggcgggtgt acatcaccgc gattccggcc ccgttccggc ggaagaggtt
     1261 ctcccggtag gtgcagctgt ccgagaacat gaaatggagt ccgtagcgcg cgttgccgct
     1321 gctggtgttt ccctggatca gcgtgttgcg cacgaattcg aagtagagcc cgtcgcggtg
     1381 gccgctgacg acgttgtcca ccaggtccat ccggttggcg ctccaaagat ggatggcgtt
     1441 gccggcatca cgttggcgcc ggcctggtcc ccgcacccgg tttcgctcca agcggcaccc
     1501 ctctgactgg gcgagataga tgccgaagta cgactcgcga atctccaggt ccaccacgcg
     1561 acagcctcgc acgccctcga atcgcagcgc ggcccggtcc tccacctggc tgggctgcac
     1621 gttctccaac acgagacccc ggagcacaac gctgtccgcg gtgaccagca ccagcgtatg
     1681 gtcgccccgg ccccggatga ccggacgccc ttcgccgacc agctcgagcc ggcggtcgat
     1741 aatgatgggg ccttcgtgat aggtccccgc ccgcaccacg atgcgatcgc ccggcgcggc
     1801 ccgccgcacc gcctcggcca cggaggagat gggtccgccg gctgagacga tggtttgcgc
     1861 cggtatggag ccgggcagga ccatccccgc cagcaccagg ggaagtaacc gtttcacgtt
     1921 caccgttcac cgttcactgt tccggctgac cctgagccga ggcggccgcc agcacctcgt
     1981 cccaggtctg ctccacaccg ttcagcgcga cccgcaaact gtcggcccgg gctcccgggc
     2041 gcaccgcgat cacccggcta tccatcggag ttcgaatccg gtcggtcctg atgaagacca
     2101 ccctccgggc atcgagcagc gagtcgggct ccagaaagtc gctcacccag agcgagtgca
     2161 cgtcacgggc agccaccctg cccgccgaaa cgaaggccgc caggcatccc ggatcgtcga
     2221 acacgtagac cttgtgccgg cgggtcacca gctcggcgct gaagcgggga tcggccacgg
     2281 ccatgtggca gtgctggcag ttgaccgcgc catacctgat ggaggcggga cgcggcgctc
     2341 cgcatcccgc cccgatcatg gccgccagga gccacccgcg cgaacccatc aggccgcgcg
     2401 ccggagcgcg gcttcgggcg gagtgactcg ggagcgcttc cattccacga cacaagcggc
     2461 cgacgccaga aaaccggcca ccatgatggc ccagcctccc agcgcgggcc acgacgtcgc
     2521 ctggaagttg aggagttgcc tgctgccgat cagaggcggc tggtaggcca tgccgggcac
     2581 cttgatcgcc gcggtggaat cgaggttgtg gccgtagtcg tacccccacc tccagaagtc
     2641 ccccaggccc gccagcgcca gcagcagcag ggcggaggtc caggcataga gcagcgggcg
     2701 gcggccggcc gctgctgccc ccaatcccag cagcagcagc ccgcccagga tcacgggcat
     2761 gaatcgcagc tccgggatcg attccgggat aatgggct
//
LOCUS       DASWKS010000041         3173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2238141, whole genome shotgun sequence.
ACCESSION   DASWKS010000041 DASWKS010000000
VERSION     DASWKS010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238141"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1595)
                     /locus_tag="VGA78_01415"
     CDS             complement(<1..1595)
                     /locus_tag="VGA78_01415"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9892544.1"
                     /translation="MLVRPVVLALWLPLAALLFSTPLQAQADTAATRSDSTRRVTRLS
                     PISVTATRSDRRVFHIPSPVLVLDSATVRQEVPNGVADLFRNLPGVDVTGVGPSQSRL
                     VIRGQRGQRILLAENGIRLNNSRRQQDFGELPSLTDINGVSRVEVVRGPASVLYGTDA
                     IGGVVNQITLAAPGQGTPDGVRGSLMFTYGSAAEQQLVHGLLTGRAGRLGFAFTAGYR
                     DAGAYDAPAGTFGNLTLNRPTRVNDTGVIDRNFSGDLGYDVARGQTISLRVSHYAARD
                     AGFGYVTPSDLGDAEGATVQLLYPEQDVTRATLGYHATGLSWALADRLSLTGYTTQND
                     RVFTQFIAVPFGEPFPPGSGIDINTKNVTDIGTYGARIEASKIVAGKHSITYGVDWFT
                     DRADNADTNVTVMRMFGPPTTRISNAPTLPNASLWSGGAFAQADLALLERFSLGLGLR
                     GQTIHSETRTTEGLPADRAGISATDGTVVGSVSGRYQLTNAINLVGTVGRAFRAPNLV
                     ERYFEGAVPEGNGFQLANPDLAP"
     gene            complement(1777..2421)
                     /locus_tag="VGA78_01420"
     CDS             complement(1777..2421)
                     /locus_tag="VGA78_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9892545.1"
                     /translation="MTAIRVLIVDDHALVREGIRQALAAPGFEVVAEAGDGAEGIAKA
                     RQFDPDVVLLDISLPGENGLRTAARLRADVPGSRILMLSVYDQPEYVLEAVRVGAHGY
                     LLKDTLPAELRQAIQTVAAGGTLFERVLSGPREPEPRVIPGDLLERLDQLTRREREVL
                     VGIAGGKTNKEMAAALGLSPRTVESYRESLIRKLGIPSVAGLTKFALDAGLLGR"
     gene            complement(2418..>3173)
                     /locus_tag="VGA78_01425"
     CDS             complement(2418..>3173)
                     /locus_tag="VGA78_01425"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX9892546.1"
                     /translation="DDGILVAVGEQIGAALEALELTQRLAGRSADLERLSVRMIHQHE
                     EQRRRLARELHDETAQVFSALKLQLGSLREAAVPELAPRFDRVLELVNTGVRSIRNVT
                     EDLRPTILDDLGLVPALRTLADQFSQWSGLRVEFESPDQLPDLTAEAELALFRAVQEG
                     LSNVARHANARGVLVSVQQQNGRLRLLVEDDGVGLAAERLSQITTGPGRSGLFGMRER
                     ITAQGGRVTLDPGRAGGLRLVVELPVQDVEGVR"
BASE COUNT          500 a         1089 c         1088 g          496 t
ORIGIN      
        1 tcgggcgcga gatcggggtt ggccagctgg aagccgttgc cctccggcac cgcgccctcg
       61 aaatagcgct ccaccagatt gggcgcccgg aaggcccgtc ccactgtgcc gaccaggttg
      121 atcgcgttgg tcagctgata ccggccgctg accgagccga ccacggtgcc gtcagtggcc
      181 gagatccccg cgcgatcggc cggcaggccc tcggtggtcc gggtctcgga gtgaatcgtc
      241 tggccccgga gccccaggcc cagcgagaac cgctccagca gggccaggtc cgcctgggcg
      301 aacgcacccc cgctccagag cgacgcgtta ggcagggtcg gcgcattgga aatccgggtc
      361 gtggggggac cgaacatccg catcaccgtc acgttggtgt ccgcgttatc ggcccggtcg
      421 gtgaaccagt ccacgccgta cgtgatggag tgtttgcctg ccacgatctt ggacgcctcg
      481 atccgggcgc cgtaagtgcc gatgtcggtc acgttcttgg tattgatgtc gatgcctgag
      541 ccgggcggaa agggttcccc gaacgggacg gcgatgaact gggtgaagac ccggtcgttc
      601 tgggtggtgt agccggtcag actgagccgg tccgccagcg cccaggacag gccggtggcg
      661 tgataaccca gtgtcgcgcg ggtgacgtcc tgctccggat agagcagctg cacggtggcg
      721 ccctccgcgt ctcccaggtc gctcggggtc acgtacccga aaccggcgtc gcgcgcggcg
      781 tagtgcgata ctcgcagcga aatcgtctgg ccacgggcta catcgtagcc cagatcaccc
      841 gagaagttgc ggtcgatcac gccggtatcg ttgactcggg tcgggcgatt gagcgtcagg
      901 ttgccgaagg tgcccgcggg cgcgtcatag gcgcctgcgt cgcggtaacc cgcggtgaag
      961 gcgaatccca gccggccggc gcggccggtc agcaggccgt ggaccagctg ctgttcggcc
     1021 gccgagccgt aggtgaacat caggctgccg cgcaccccgt ccggtgtccc ctggcccggg
     1081 gccgccagcg tgatctggtt gaccacgccg ccgatggcgt ccgtcccgta cagcaccgag
     1141 gccggccccc gaaccacctc gactcggctc acgccgttga tgtcggtcag gctggggagc
     1201 tcgccgaaat cttgctgccg gcggctgttg ttgagccgga tgccgttctc ggccaggaga
     1261 atgcgctgac cccgctggcc ccggatgacc aggcgggact ggctgggccc cacgcccgtc
     1321 acgtccaccc cgggaagatt gcggaacagg tcggcgactc cgttaggcac ttcctgccgc
     1381 accgtggcgg agtcgagcac caggaccggg ctgggaatgt ggaacacccg gcggtcgctg
     1441 cgggtggccg tcacggagat cggcgacagc cgggtcacgc gccgggtgga gtcgctccgc
     1501 gtggcggccg tgtcggcctg ggcctgaagc ggggtggaga acagcaatgc cgccagaggc
     1561 agccacagcg ccagcacaac gggtcggacc aacatggtgt ggggctcgag tctgaagagt
     1621 cgttggcaat ctctgtccga gcgcctagcg gcgtcaccgt acgattgcgg gaaaaacgga
     1681 cccgtatttc tacggcggtg aggttctcta agtgagagga tgaagcggag ttaagtggcg
     1741 ggtgaaaccc ggttcagaaa ggggtgtccc agaggactat cttcccagca gccccgcatc
     1801 gagcgcgaac ttggtgaggc cggccaccga gggaatcccc agcttccgga tcaggctctc
     1861 gcgataggat tccaccgtgc gcgggctcag tcccagcgcc gcggccatct ccttgttggt
     1921 cttcccgccg gcgatcccta ccaggacctc gcgctctcgc cgggtcagct gatccagccg
     1981 ctcgagcagg tcgcccggga tcacccgcgg ttcaggttcc cgcgggcccg agaggacccg
     2041 ttcgaacaaa gtcccacccg ccgccacggt ttgaatcgcc tggcggagct ccgcgggcag
     2101 ggtgtccttg agcaggtagc cgtgggcccc gacccgcacc gcttccagca cgtactccgg
     2161 ctgatcgtag acgctcagca tgaggatccg ggaacccgga acatcggccc ggaggcgggc
     2221 cgccgtccgc aacccgttct cgcccggaag cgagatgtcg agcagcacca cgtcggggtc
     2281 gaactggcgc gccttggcga tgccctcggc gccgtcgccc gcttcggcga ccacctcgaa
     2341 gccgggtgcg gcaagggcct ggcggatccc ttcccgcacc aacgcgtgat cgtccacgat
     2401 gagcacccgg atcgcggtca tctgactcct tcgacgtcct gcaccggcag ctcgaccacc
     2461 agccgcagcc cgccggcccg gcctggatcg agggtcaccc ggcccccctg ggcagtaatt
     2521 cgctcccgca tcccgaatag tccggagcgc cccggcccag tggtgatctg ggagagccgc
     2581 tcggcggcca ggccgacgcc gtcatcctcc accagcagtc gcaaccggcc gttctgttgc
     2641 tgcaccgaga ccaagacgcc ccgcgcgttg gcgtgacggg ccacgttgga cagcccttcc
     2701 tgcaccgcgc gaaagagcgc cagctccgcc tccgcggtca ggtcgggcaa ctgatcgggc
     2761 gattcgaact cgaccctgag gccgctccac tgggagaact ggtcggccag ggtccggagg
     2821 gcgggcacca gacccaggtc gtcgagaatg gtgggacgga gatcttccgt gacattgcgg
     2881 atgctgcgga ctccggtgtt caccagttcc agcacccgat cgaaccgggg ggcgagctcg
     2941 ggcaccgcgg cctcccgcag gctgccgagc tgcagcttga gcgccgagaa gacctgggca
     3001 gtctcgtcgt gcagctcgcg ggccagtcgg cggcgctgtt cctcgtgctg atggatcatg
     3061 cgaaccgaaa gccgctccag gtcggcgctg cggcccgcga gccgttgggt cagctccagc
     3121 gcctccagcg cggccccgat ctgttcgccc accgccacca ggatcccgtc atc
//
LOCUS       DASWKS010000042        17546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_390456, whole genome shotgun sequence.
ACCESSION   DASWKS010000042 DASWKS010000000
VERSION     DASWKS010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17546
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390456"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..1929
                     /locus_tag="VGA78_01430"
     CDS             172..1929
                     /locus_tag="VGA78_01430"
                     /inference="COORDINATES: protein motif:HMM:NF025067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HEX9892547.1"
                     /translation="MRFPSLALLAERAAVVARRFPLTLLAGAVAATAAIISTEATRQD
                     DWVRLTFVAALGLPATIALRLLAERRRWSPAPRLLAPALGLVLLAGFHAIWPGPDQKH
                     EAIRYFQLSAVVHLAVAFLPLTGSPDSLAVWQYNRRLFLGFLRAVVFSAVLFVGISIA
                     LAALDQLFGVDVEEETYLRIWFVMAFVVNTWIFLADVPRDLDALAQDTDYPRALKVFA
                     QYILTPLVFGYLLILLAYLVKLVAGTEWPSGWIGWLVSSVAVTGLLGFLLVHPLRTDP
                     GETWIRTYARWLFVGLIPAALMLLVALWKRIEPYGLTEPRVLAVLLGTWLLGIAIRFS
                     LRPASGIRLIPSSLALLLVLTLYGPQSVTGVSVASQRNRLRNHLARDPMGGDDAAQAS
                     AALRFLLEHQAGGAIAAAVGRELPPIDWESVRHRGAPRDSAGTRIMALAGARYIPEYA
                     ALGPDGTFHLGADRSAPTLVTGFDWVLALHSGDVGVNPAGGDTVAVRFDSATGIAQVQ
                     VGADTMRFDLMPVIERVVDSIPAGRAIRADLLQADAIPGGRKARLMLERLGGGRNEGS
                     LVIRNWSGSLLLGARDKED"
     gene            complement(2007..2444)
                     /locus_tag="VGA78_01435"
     CDS             complement(2007..2444)
                     /locus_tag="VGA78_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892548.1"
                     /translation="MGFVRSFALALVSGTAACGAGPAAAPPVPASGATLAQVYYWRAK
                     PGKFEEYGRYITEFAERVDAEAHQEGAFVSVTTYVSRDSTSPWTHMRVFLLRDSTQLR
                     GLSAALERAGSRVEPDSARRRARSEYSATLRDRVGSETLEVLR"
     gene            complement(2544..3956)
                     /locus_tag="VGA78_01440"
     CDS             complement(2544..3956)
                     /locus_tag="VGA78_01440"
                     /EC_number="4.1.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF009709.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050371 - tyrosine phenol-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006570 - tyrosine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine phenol-lyase"
                     /protein_id="HEX9892549.1"
                     /translation="MSEHPFETAGQQHQRRSWAEPWKIKVVEPLRVTSPAERQRALAE
                     AGYNTFLLRSEDVYIDLLTDSGTSAMSDRQWAGMMLGDEAYAGSDNFYHLEAAVREHY
                     SYKWVVPTHQGRGAEHLISRAAIEPGQFVPGNMYFTTTRLHQELAGGTFVDVIIDAAH
                     DATNRHPFKGNIDLAKLEALIRREGAAKVAYVSLAATVNMAGGQPVSMENVRSVRALC
                     DRYGVRLYLDATRAVENAFFIQEREPGYANMAVKAILHEFCSHTDGAWMSAKKDSLVN
                     IGGWLAVNDADLFEQLGNMAVVYEGLHTYGGMAGRDMEALAIGITESVQDDYIRARIG
                     QVRYLGEILTGWGIPIVEPVGGHAIFLDAKRFYPSITQDQFPAQTLAAQLYLDSGVRS
                     MERGVVSAGRDPATGDHRYPKLELTRLTIPRRVYTQAHMDVVAESVRAVWETREGTEG
                     LRMVFEPRYLRFFQARFEPA"
     gene            complement(3957..6689)
                     /locus_tag="VGA78_01445"
     CDS             complement(3957..6689)
                     /locus_tag="VGA78_01445"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX9892550.1"
                     /translation="MPRRRIGLLLIVAGFAAVLLLFPILSGLLTDWWWFKEIGYQVVF
                     TRELVTRALLFLAAGALTFGVLYGNLRLAQRGLVPHPIVLELGESAQPFNLTAALRRL
                     SLPASLALGLLAGLAVTPAWSVVLRMIYRTPFGIADPVFSRDIGFYLFTLPGLGSLLG
                     FLTGLVSISLLLLFPLYWIRGDIIPGRRQIRFEPSAGIHLGSLIAVLFLLTAVRLWFV
                     DAPQLLYSTTGPLVGASYTDLHARLPAIRVTAGLALVAAAMVLIGALRRDLSRWGLRA
                     VVGYIAVVLLGRALIPLVLQKLVVAPTELTRETPYLEHHIAATRAAWGLDSVDTRELD
                     GEADLTLADIRANSATIENVRLWDRDPLLQTFGQLQEIRTYYDFVSVDDDRYWIDGKY
                     RQVLLSPRELNPASLPTRTFINEHLTFTHGMGLTLSPVNQVTIEGLPVLFIRDLPPVS
                     DVSLKVTRPQIYYGEVANEFVFVGTKQREFDHPSGEANVYASYEGSGGVKVGNLLRRL
                     VLAVRFGSSKILLSQDITNDSRVLYYRNVIQRAGRALPFLRFDRDPYMVATTEGRLVW
                     IADAYTASAGYPYAQRLADGTSYMRNSVKLVIDAYDGTLTAYVSAPGDPMIRTWAKVF
                     PGIFQPLDSMPADLRAHLRYPDDLYRVQTALYTSYHMEAPEDFYHREDQWQIPVVADA
                     QAAVPFMRHIVMRLPDEPTAEFIYMVPFTPRGKDNLAAWMVARNDGDAYGKLRVYRLS
                     RQSLVFGPQQIENRINQDTEVSRQVSLWDQGGSKVIRGDLLVIPIEQSLLYVQPLYLQ
                     AEGGKIPELKRVVVAYQNQVVMEETLDAGLARLFGGSAKDAPVAVAGTGPAPAAATSG
                     PALSDAELQTLVAEARSRYQAALAAQRAGDWARYGEEIRKLGEVLERLGGKGGR"
     gene            7434..7751
                     /locus_tag="VGA78_01450"
     CDS             7434..7751
                     /locus_tag="VGA78_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892551.1"
                     /translation="MPSARRVSYDIAGLWVRVGLSATLGVLMTQWPYRHECGWPLMGY
                     FGAVSTVMLSGAWIGFTSWRLRSGFAHLVALVLFFWGIVLAAEQLLPRIGYAALEAAW
                     RCR"
     gene            8019..9209
                     /locus_tag="VGA78_01455"
     CDS             8019..9209
                     /locus_tag="VGA78_01455"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEX9892552.1"
                     /translation="MSPSKGTIAILTGGGDVPGLNPAIRAITIRALREGYRVVGIRRG
                     WAGLVDYVPDPSADNSANVQLLSEADVNRAGRTGGTFLHTSRTRPSHLPRARVPAHLS
                     GYSEPVNDITKDVLANLTHIGIDVLIPIGGDDTLSYAKRLHDEGVPVVAIPKTMDNDV
                     YGTDYCIGFSTCVTRTIELTHRLRTSAGSHERFLVIEVFGRYAGFTALLPTMAGAADR
                     CVIPEHPVDVEHLTELLTYDRNRNPSRYAVVLVSEGAHLTTHEGMSFESEETDMFGHR
                     KLGGIGDKVAAALTEYSQRFNNGRRIDVVNQRLGYLVRSGDPDALDSIVPMAFGNLAL
                     QLVLRKEYGRLVSIHRGFYDSVPIGSVTAEKKVVNVLKYYQTERLRPIYEFDGAPLFI
                     MTSD"
     gene            complement(9226..10419)
                     /locus_tag="VGA78_01460"
     CDS             complement(9226..10419)
                     /locus_tag="VGA78_01460"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9892553.1"
                     /translation="MNFMKVWSLAALLALSVRVAGAAQSAFPGRTWPTATPASVRLNP
                     AVLDSIAGEIGSGRYGYVDRMVVIQGGRLVYDKHWAWNYDSIYGDSARVRNPLNAHDP
                     TGHYNYFNPWWHPTWRRGDLHSLQSVTKTITSVIIGTAILRGDFPSIDSPVLRFFDTT
                     KVEHIDDRKRRMTVRHLLTMSGGLDWNEDLPYIDSANTAVAMEASYDWVGYTINRPMA
                     VEPGSRWRYSSGETELLAHIFRRATGSDIEEYAAKHLFAPLGIERWFWKRTPSGLVDT
                     EGGLYLEARDLARIWYLWLKGGNWNGNAIVSPQWVRESVAPALRVSNAAGAPSYGFKW
                     WLYRNPMDTTKWVWSGSGFGGQIPMAVPELDLVVVFNGWNILPGRPGLPRGRVLERIL
                     RAAAR"
     gene            10619..11527
                     /locus_tag="VGA78_01465"
     CDS             10619..11527
                     /locus_tag="VGA78_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892554.1"
                     /translation="MGHPHFRGAFLWTILVPVLAACGGDNPAELPRPIPPIGNRATAD
                     RPAETSGSQIHIIYMVPADGKDTGIDTTGRLENSVGSFQNWLVGKVGKRIRQDTYQGR
                     LDISFFKSSKADADIAASGQSILRNLYDELHAAGFDDPATKYLIYYDGTNPNTCGNAF
                     RDGPAAALYLRGSANGKSCIGRFVTSPDAHPGYWEFAMLHEILHTLGMVDAKAPHHDA
                     TRPLHVEDGEDLMHGGGGTWLPDFVDRDNDDYYGDSVPSNARNLRNDPILVSAPAAAI
                     ARAQAQLTRPRFIPHFVHEVLEFKKP"
     gene            11829..12902
                     /locus_tag="VGA78_01470"
     CDS             11829..12902
                     /locus_tag="VGA78_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892555.1"
                     /translation="MSPKCMPVLGFAAGALLVAACQNQREPTGPEQIPSSQATAQQLP
                     AQAQQRTTWFRQVSPEVMALPRTVFADDDESSGLLVFGVEHAEVVAGVRAVLTRHGLP
                     ASAYRIEVTEPIRFAADLQDAHRPTLGGIQIVFRSSACTLGFNVEHADGPSFVTNSHC
                     SSRIGAIDGTDYYQPVRVVPPQFAEIIADEVDDPTYFKGGVCSLGKKCRYSDAARALY
                     RSGIDSEQGEIARTSGANNGSIDVIGDFTITAQGDYTTNTLHKVGRTTGWTSGQVVGT
                     CITVNVFGSNVQLLCQNEVQLANTQILGAGDSGSPVFQIVSGNNVRLVGILWGGSVTG
                     DSFVFSPFSAIQTELGSLTATLP"
     gene            13379..15091
                     /locus_tag="VGA78_01475"
     CDS             13379..15091
                     /locus_tag="VGA78_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892556.1"
                     /translation="MSFESRAAFATLLSLLAAWLVPACPAAAQEGPVKGNLGITISAL
                     PARLTPGDSVRLLGSTGLTGSSSQVSIVVRPPGKPPVTLQVKPGTQGAYQIRFGATGG
                     LGTYQVEAVAPDGKGKASTSFTIVSAVALAEETARKADSLVMLGSRVVDRVQQAVDGL
                     PASPAKNEVKEKLDKVDSELAKLPQQVAALRQQMSKVFAARTKVAKPIPEWVDYEEEL
                     VQWEADADQALAKLEKLAAPTAAATQGCSDLDRYNEMLTFTSEAMNYLAAPFDLSRGF
                     WTDKIPGGLVARSSGAQALTSAERFALVETMKIGAAALQGPAGIVSAVPGLLLDTAQW
                     FVQDYFGKFCEKWEGPMQGTFLGESFTRQGEPFFDYTIMLDGKLMLLYPKNVPAGKPV
                     SLQGYFEGNGRFEIRDNPKPIARLVPGSVLFHRITAPPGSGYWDELGQASRGLLPHSF
                     RIPVKGIMAGDSIMLTLQPADHDFGPTVAGVSTWVIMPLGGLVPEVINAKIGLQKAHP
                     IIERVIRRRPVLRFVTAGKSMTAEATFSRDTTNTEKTARVRTTLKVKACNPGCLPLPG
                     GGKL"
     gene            15109..16158
                     /locus_tag="VGA78_01480"
     CDS             15109..16158
                     /locus_tag="VGA78_01480"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9892557.1"
                     /translation="MRYHSLLLLPAAGLLPGTARAQSPQVPFAPALQLTWASSLSGEP
                     DYETVITVKQVDSGEARLTIAWNRGARREWQSVERRVSSRERRLARSFYFYSSTSNPR
                     EYRGTTQSLLSGAVLNQLKSAGRADVVLLVPSLSNLPFRGTLQRAGTGAEPFPVLLNG
                     KRVMLPGIRARGQFKGDRLLDFDVLVWDNPEAPWVLEATSKQVEEDRGGRRLLVRIGT
                     DARGQEVASTLDERCTVSIHDIYFATGSDALDSTSAPALGAIARTLESHPDWRITIVG
                     HTDSIGADAANLDLSRRRAERVRTTLVGEYGIAADRLKSDGRGEKQPLDDNGTISGRA
                     RNRRVDLVRACKPSS"
     gene            16174..17184
                     /locus_tag="VGA78_01485"
     CDS             16174..17184
                     /locus_tag="VGA78_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892558.1"
                     /translation="MRIGTWPAVMAILAVACGGGAESAGKDAAPDAAALPSGPDPCSL
                     VSQSDVEALMGPLAEPPYRVDNNRRPAVAGEGCFYRARDRRNVTILVDWEDGELGFQM
                     LAGTGASISDILTGYDATTDTLEGNWDKVGAPFGQFIVLKGKTSIQIDPLGSRIGLDG
                     AARLASIAIGRLGSPLDYSGAKATQARAEDTPRSRNPCELVTRQEVEALMGPLLADPT
                     PAEDGSGCEFRTDKKFLNEPVVRKLEVQWTDGFYTLGQERSATGMAAKAMQMHVDPET
                     PTLSREAVGEAEPWDERMTLMPGLITVVKQDVLLKLPGDGVFGFDEEKALKLLRIAVG
                     RL"
     gene            complement(17257..>17546)
                     /locus_tag="VGA78_01490"
     CDS             complement(17257..>17546)
                     /locus_tag="VGA78_01490"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892559.1"
                     /translation="FVILPPDEPMVSGSKKVRSWLEAYPAVKQFDPEFDHIEGQDHFA
                     VGYGHYTITIEAKGTSTKTNGKFVNTYRRDDHGKWLCACQIWNSNAPAATR"
BASE COUNT         2963 a         5913 c         5684 g         2986 t
ORIGIN      
        1 gcggtcgaga tcgtatgggt cggtggcgga ttctcttccg gcgtcgcgca actcgcctcc
       61 ttgcagtgat tgcgctcgcg tcccggcgcg gcttctttga gcaggtagag gccccgtagt
      121 attcagaagc gggacggcgc gttggtcacc ttccccctcc ccgaggcacg catgcggttc
      181 ccttccctgg ctctgctcgc cgagcgcgcc gcggttgtgg ctcgccgttt ccctctcacg
      241 ctcctggcgg gcgcggtcgc ggcgaccgcc gccatcatct ccaccgaggc gacccgccag
      301 gacgactggg tccgcctgac gttcgtcgcg gctctcgggc tcccggcaac catcgccctc
      361 cggctgctgg ctgagcgccg acgatggtcg cccgccccgc gactgctcgc ccccgcgctg
      421 gggctggtcc tgctcgccgg tttccatgcc atctggcccg gcccggatca gaagcacgag
      481 gccatccggt acttccagct gagcgcggtg gttcacctcg cggtcgcatt tctgccactc
      541 accggctcgc ccgactcgct cgccgtctgg cagtacaacc gtcgcctctt cctgggattc
      601 ctgcgcgccg tcgtgttctc ggccgtgctc ttcgtgggca tctcgatcgc gctggccgcg
      661 ctggaccagc tcttcggggt tgacgtcgag gaggagacct acctgcgcat ctggttcgtc
      721 atggccttcg tggtgaacac ctggatcttc ctggccgatg tgccccggga tctcgacgcc
      781 ctggcgcagg acaccgacta tccccgcgcg ctcaaggtct tcgcccagta cattctgacg
      841 ccgctggtct tcggctatct gctgatcctg ctcgcctacc tggtgaagct ggtggccggc
      901 accgagtggc ccagcggatg gatcggctgg ctggtgagca gtgtggcggt gaccggactg
      961 ctcgggttcc tgctggtgca tcccctccgg accgaccccg gcgaaacctg gatccggacc
     1021 tacgcccgct ggctcttcgt aggcctgatt ccggctgccc tcatgctgct ggtcgccctg
     1081 tggaagcgga tcgagcccta tggcctcacc gagccacgcg ttctcgcagt cctgctcggc
     1141 acctggctgc tgggcatcgc gattcggttc tcgctccggc cggccagcgg catccggctg
     1201 attccatcat ccctggccct gctgctggtg ctcactctgt acggcccgca gagcgtcact
     1261 ggcgtctcgg tggcgagcca gcgaaaccgg ctcaggaatc acctggcgcg ggatcccatg
     1321 ggcggggacg acgcggccca agcgagtgcc gcgctccgct tcctgctgga gcatcaagcc
     1381 ggcggcgcga tcgcggcagc cgttgggcgc gagctccctc ccatcgactg ggagtcggtg
     1441 cgccaccggg gcgcgccccg ggattcggcc ggaacccgga tcatggcctt ggccggtgcg
     1501 cgctacatcc ccgagtacgc ggcgctcggc cccgacggca cgttccatct gggcgccgac
     1561 cgatcggcac cgacgctcgt gaccggcttc gactgggtcc tcgcgctgca ttccggcgat
     1621 gtgggtgtga accccgccgg aggcgacacg gtcgcggtcc gtttcgacag cgccacgggc
     1681 atcgcgcagg tccaggtggg cgcggacacc atgcggttcg acctgatgcc cgtgatcgaa
     1741 cgggtggtcg attcgatccc cgccggccgg gcgatccggg ccgacctgct tcaggccgat
     1801 gccattccgg gtggacggaa ggcgcggctg atgctggagc gtctgggagg cggccggaac
     1861 gaggggagcc tggtcatccg gaactggtcg gggtcactgc tcctcggggc gagagacaaa
     1921 gaggactgag gactgaggac cggggactga gggggaccgc accctcggac cgactctgga
     1981 gatccccgtg caatcgcctc gccttgttag cggagcacct ccagcgtctc gctcccgacg
     2041 cgatccctga gcgtagcgga gtactcgctg cgggcgcggc gcctggccga gtcaggctcg
     2101 acccgtgagc ccgctcgctc cagcgccgcc gacaggcccc ggagctgggt gctgtcccgg
     2161 agcaggaaga cgcgcatgtg ggtccagggc gacgtggagt cgcgcgatac atacgtcgtc
     2221 accgacacga acgcaccctc ctgatgtgcc tccgcgtcga cccgctccgc aaactcagtg
     2281 atgtagcggc cgtactcctc gaatttgccc ggcttggcgc gccagtagta cacctgggcc
     2341 agcgttgcgc ctgacgccgg aaccggcgga gcagcagcgg gccccgcgcc acaggccgcc
     2401 gtcccggaca cgagggccag agcgaaggac ctgacgaatc ccattccagc ctccagttcg
     2461 atggggtgaa ggtatcggag tgccagtcgg attaggccgc ctgcggcccg ccgggttgcg
     2521 ccccgcgcga tcgggggaca ggctcaggcc ggctcgaacc tcgcctggaa gaacctcaag
     2581 taccggggct cgaagaccat ccggagtccc tctgtcccct cccgcgtttc ccagaccgcc
     2641 ctcaccgact cagccaccac gtccatgtgc gcctgggtgt aaacccgccg ggggatcgtg
     2701 agccgcgtca gctcgagctt gggataccgg tggtcccccg tcgccgggtc gcgccccgcg
     2761 ctcaccaccc cccgctccat gctccgcaca cccgagtcga gatacagctg tgccgccagg
     2821 gtctgcgccg gaaactgatc ctgggtgatg ctcgggtaaa agcgcttcgc gtccaggaag
     2881 atcgcatgcc ctcccaccgg ctccacgatc ggaattcccc accccgtcag gatctctccc
     2941 aggtaccgca cctgaccgat gcgcgcccgg atatagtcgt cctgcaccga ctcggtgatc
     3001 ccgatcgcca gcgcctccat gtcccgcccc gccatccccc cgtacgtgtg cagtccctcg
     3061 tacaccaccg ccatgttccc cagctgctcg aagagatccg cgtcgttcac cgccagccac
     3121 cctccgatgt tcaccaggct gtccttcttg gcgctcatcc aggcgccgtc ggtatggctg
     3181 cagaactcgt ggaggatcgc cttcaccgcc atgttggcgt aacccggctc ccgctcctgg
     3241 atgaaaaagg cgttctccac cgcccgcgtg gcatcgaggt agagacgcac gccataccgg
     3301 tcgcagagcg cccgcactga ccgtacattc tccatgctca ccggctggcc gccggccatg
     3361 ttgaccgtcg ccgccaggct cacgtaggcg accttcgcag ccccctcccg cctgatcagc
     3421 gcctccagct tggccagatc gatgttcccc ttgaaggggt gccggttggt tgcgtcgtgg
     3481 gccgcgtcga tgatcacgtc cacaaaggtc ccgcccgcca actcctggtg gagccgcgtg
     3541 gtagtgaagt acatgttgcc cggcacgaac tgcccgggct cgatcgcggc cctgctgatc
     3601 aggtgttccg ccccgcgtcc ctggtgagtc ggcaccaccc atttatacga gtagtgttcg
     3661 cggacggccg cttcgagatg gtagaagttg tcactcccgg cgtaggcctc gtcgcccagc
     3721 atcatccccg cccactgccg gtcgctcatc gcgctggtgc cgctgtcggt cagcaggtcg
     3781 atgtagacgt cctccgagcg gagcaggaag gtgttgtaac ctgcctcggc gagggcgcgc
     3841 tggcgctccg ccggggaggt cacccgaagt ggctcgacca ccttgatctt ccagggttcg
     3901 gcccagctgc gacgctggtg ctgctggccg gcggtctcga agggatgttc tgacattcag
     3961 cggcctccct ttccgcccaa ccgctcgagt acctcgccca gtttgcggat ttcctcgccg
     4021 taccgggccc aatccccggc ccgctgcgcg gcgagcgcgg cctgatagcg gctccgcgct
     4081 tccgccacca gcgtctgaag ctccgcatcg ctcaacgcgg gccccgacgt tgccgcagca
     4141 ggagcaggtc cggtcccggc caccgccacc ggcgcatcct ttgccgaccc gccgaacagc
     4201 ctggccaatc cggcgtcaag cgtctcctcc atcaccacct ggttctggta ggccaccacc
     4261 acacgcttca gttcgggaat cttgcccccc tccgcctgga ggtagagcgg ctgcacgtag
     4321 agcaacgact gctcgatcgg aatcaccagg aggtcgccgc ggatcacctt ggagcctccc
     4381 tggtcccaga gcgagacctg ccgggagact tcggtgtcct gattgatccg gttttcgatc
     4441 tgctgcggac cgaagaccag gctctggcgc gacagccggt agacccggag cttgccgtac
     4501 gcatccccgt cgttgcgcgc caccatccac gccgccaggt tgtccttccc ccggggagtg
     4561 aacggcacca tgtagatgaa ctccgccgtc ggctcgtcgg gcaggcgcat gacgatgtgc
     4621 cgcatgaacg gcaccgccgc ttgcgcgtcc gccaccaccg ggatctgcca ctggtcctcc
     4681 cggtggtaga aatcctccgg cgcctccatg tggtaactgg tgtacagcgc ggtctggacc
     4741 cggtagagat catcgggata gcggaggtgg gcccggagat ccgccggcat gctgtcgagc
     4801 ggctggaaga tgcccgggaa caccttggcc caggtacgga tcatcgggtc gcccggcgcg
     4861 ctcacatagg cggtgagcgt cccgtcgtag gcatcgatga ccagcttgac actgttccgc
     4921 atgtagctgg tgccatccgc cagccgctgg gcgtaggggt agccggcgga agcggtgtac
     4981 gcgtcggcga tccataccag gcggccctcg gtggtggcca ccatgtaggg atcgcgatcg
     5041 aagcggagaa acggcagcgc ccgcccggcc cgctggatga cattccggta gtagagcacc
     5101 cggctgtcgt tggtaatgtc ctgtgacagc aggatcttgg acgagccgaa ccgcaccgcc
     5161 agcaccagcc ggcgcagcag gttgccgacc ttcaccccgc cgctcccctc gtaggaggcg
     5221 tagacgtttg cctcgcccga cggatggtca aactcccgct gcttggtgcc gacgaacacg
     5281 aattcgttgg cgacctcgcc gtagtagatc tggggccggg tgaccttgag cgacacatcc
     5341 gacaccggcg gcaggtcccg gatgaacagg accggaagcc cctcgatggt gacctggttg
     5401 accgggctca gcgtgagtcc catcccgtgg gtgaaggtca ggtgttcgtt gatgaaggtc
     5461 cgggtcggga gcgaggcggg gttgagctcc cgcggactga gcagtacctg ccggtatttg
     5521 ccgtcaatcc agtagcggtc gtcgtctacc gagacgaaat cgtagtaggt gcggatttcc
     5581 tgcagttggc cgaaggtctg caacagcggg tcccgatccc agagccgcac gttctcgatg
     5641 gtcgccgagt tggcgcggat gtccgccaga gtcaggtcgg cctcgccgtc gagctcgcgg
     5701 gtgtccacgc tgtcgaggcc ccaggccgcc cgagtggcgg cgatgtgatg ctcgagatac
     5761 ggcgtctccc gggtgagttc ggtgggcgcc accacgagtt tctgcagcac cagcggaatg
     5821 agggccctcc cgagcagcac caccgcgatg taccccacca cggcccggag cccccagcgc
     5881 gacagatccc gccgcagggc cccgatcagg accatcgcgg cggccaccag ggcgagccct
     5941 gccgtcaccc ggatggccgg cagccgcgcg tgcagatcgg tatagctggc gccgaccagc
     6001 gggccggtgg tcgagtagag cagttgcggg gcatccacga accagagccg cacggcagtg
     6061 agcaggaaca acaccgcgat gaggctgccc agatggatgc cggctgacgg ctcgaaccgg
     6121 atctgccgcc ggccggggat gatgtcaccg cggatccagt agagcgggaa gagaagcagc
     6181 aacgagatgc tgacgagacc agtcaggaat ccgagcaggc tccccagacc gggcagcgtg
     6241 aagaggtaga atccgatgtc gcgggagaaa accgggtccg cgatgccgaa cggcgtccgg
     6301 tagatcatcc ggagcacgac gctccaggcc ggggtcacgg ccagtccggc cagaagtccc
     6361 agcgccagcg aggctggaag ggacaaccgc cgcagggcgg cggtcaggtt gaacggctgg
     6421 gccgactcac cgagctccag cacgatcgga tgcggaacca ggccccgctg cgccaatcgc
     6481 aggttaccgt agagcactcc gaaggtcaga gcccccgccg ccaggaagag cagcgcccgg
     6541 gtgacgagct cccgggtgaa gaccacctgg tacccgatct ccttgaacca ccaccagtcg
     6601 gttagtaacc cactgaggat gggaaagagc agcaggaccg ccgcgaaccc ggcgacgatc
     6661 agcagcaaac cgattcttcg acggggcacc gaatcctcct gaacccggcc tcaccctgcc
     6721 ggctgggaaa ggtagtcccc gtcagggagg cgcgggaacc ctgggggggc aggcgcctgc
     6781 tccgtcatct tctgatcttc cgattgccag ggctcggaaa ctccaggact tcatgcacga
     6841 acggaggaat gagacccggg ccggcaggct gagcccgggc ccgggcaatc atggcagccg
     6901 aaaccggaac gagaatcgga tcgtccttca agtttctccc gctgcagcgc ttgccgccga
     6961 ccgatccgcg caggtacagc gcggcggccc gtccgcgctg ttctcccact atctccagct
     7021 ggttgggctg ctgcaccggg ccgtttgatt ccgatcactc cggaaagcgt tgtcaaatta
     7081 tcgaataccg cgtcatgaag tgctccggac ctgcctgggg aggcagagtg caagtccaga
     7141 gcggccgccg gagcgcccgg gtctggaatc attcgtttat cggtagggca cttgggctgt
     7201 tggttcgccg gtggtacgac aaatgcggcg cctggccctt cacaaccctc atcgatccca
     7261 tggccgacat tccccgtggt gcccgtccgg accccgttgc ccgggaggtg gatcgcctgc
     7321 tggagcagct cagctacagc ggttcacggg cagtgcccta cgctgagcaa ccgcgccctg
     7381 agcgtcgacc acgaacaccg gtgccgacgc gggcgaaacc ggctccgaac gcgatgccgt
     7441 cggcgaggcg ggtttcctat gacatcgccg ggctgtgggt ccgggtgggg ctgagtgcga
     7501 ccctcggtgt cctgatgacc cagtggccat atcgacacga atgcggctgg cctttgatgg
     7561 gttacttcgg cgctgtctcg accgtgatgc tgagcggtgc ctggatcggg ttcacctcct
     7621 ggagactccg gagcgggttc gcccacctgg tcgccctggt gttgttcttc tggggcattg
     7681 tgctcgccgc ggagcagctc cttccccgca tcggctatgc ggcactagag gctgcctggc
     7741 gttgccggta ggcagagcag gaattcccct ccgcgcaata cggtctgcaa gtaggtcagg
     7801 gcattcgtat tctgaaatca cccgcgatgg tcaggcgaag ttctcggcca gcagctcacc
     7861 gttgatcttg atggccgcgg ccaggggacc gtgacagccg gttcgatggc gagctgacga
     7921 ccttccgctg aaccacccga catctcctgc cggggccccc gagccgcact tccagcgaca
     7981 tcccagtgta gactccatcg aaccccagaa atggacttat gtcgcccagc aagggaacca
     8041 ttgcgatcct cacgggcggc ggcgacgtcc ccgggctgaa tccggccatt cgagcgatca
     8101 cgatccgggc tctccgcgaa gggtatcggg tagtcgggat ccgacgcggg tgggccggcc
     8161 tggtggacta tgtgcccgac cccagcgccg ataacagcgc gaatgtgcag ctgctctcgg
     8221 aagccgacgt gaatcgggcg ggccgaaccg gcggcacgtt tctgcatacc tcccgcactc
     8281 gaccgagcca tctcccccgc gcgcgggtcc ccgcccacct gagcggctac agcgagccgg
     8341 tcaacgacat caccaaggat gtgctggcga acctgacgca catcggcatc gacgtgctga
     8401 tccccatcgg cggggacgac acgctcagtt acgccaagcg gctgcacgat gaaggcgtgc
     8461 ctgtcgtcgc gatccccaag accatggaca acgacgtcta cggcacggac tattgcatcg
     8521 gcttcagcac ctgcgtgact cgcacgatcg agctgaccca ccggctccgc acctcggcgg
     8581 ggtcgcacga gcgctttctc gtcatcgagg tcttcggacg ctacgcgggg ttcacggcgc
     8641 tgctcccgac catggccggc gccgccgacc gctgcgtcat tccggagcac cccgtcgacg
     8701 tcgaacatct caccgagctg ctcacctacg accgcaaccg gaatccgagc cgctacgccg
     8761 tggtcctggt gtcggaggga gcccacctga ccacccacga aggaatgagc ttcgagagcg
     8821 aggagaccga catgtttggc caccggaagc tgggcggcat cggcgacaag gtggcggccg
     8881 cgctgacgga atactcccag cggttcaaca acggccgccg catcgacgtg gtgaaccaac
     8941 ggctcggcta tctggtccgc tccggcgatc cggacgcgct cgactcgatc gtgccgatgg
     9001 cgttcggcaa cctggcgctc cagctggtcc tgcggaagga gtacggccgg ttggtgagca
     9061 tccaccgcgg gttctacgac agcgtcccga tcggaagcgt cacggcggaa aagaaggtgg
     9121 tcaacgtgct caagtactac cagaccgaac ggctgcgccc gatctatgag ttcgacggcg
     9181 cgccgctgtt catcatgacg agcgactgac cgaccgcgca ggacatcacc tggccgcagc
     9241 cctgagaatc cgctccagca ccctgccccg cggcagtccc ggacgcccgg gcaggatatt
     9301 ccagccgttg aagaccacca ccagatcgag ctccgggacc gccatgggga tctgtccccc
     9361 gaagcctgat ccgctccaca cccatttcgt cgtgtccatt ggattgcggt acagccacca
     9421 cttgaatccg taactcggcg cacccgccgc gttcgacacc cggagcgcgg gggcgaccga
     9481 ctccctgacc cactgcggcg acacgatcgc gttgccgttc cagttgccac ccttgagcca
     9541 cagataccag atccgcgcca gatcgcgtgc ctcgaggtag agcccaccct cggtgtccac
     9601 caacccgctc ggcgtccgct tccagaacca ccgctcgatg ccgagcgggg cgaacaggtg
     9661 cttcgccgca tattcctcga tgtcgctgcc ggtggcgcgg cggaagatgt gcgccagcag
     9721 ctcggtctcg ccgctgctat agcgccaccg gctccccggc tccaccgcca tcggccggtt
     9781 gatcgtgtac cccacccagt cgtatgacgc ctccatggcc acggcggtgt tggcggagtc
     9841 gatgtacggc aggtcctcgt tccagtccaa cccgcccgac atggtgagca ggtggcggac
     9901 cgtcatccgc cgcttccggt cgtcgatgtg ctccaccttg gtggtgtcga agaagcggag
     9961 caccggcgag tcgattgaag ggaagtcccc ccggaggatg gccgtcccga tgatcaccga
    10021 cgtgatggtc ttggtgaccg actggagcga gtgcaggtcg ccccggcgcc aggtcgggtg
    10081 ccaccacgga ttgaagtagt tgtagtgccc ggtcgggtcg tgcgcattga gcgggttccg
    10141 cactcgcgcg gagtcgccgt agatgctgtc gtagttccag gcccagtgct tgtcgtacac
    10201 caggcgcccg ccctgaatga ccaccatccg gtccacgtag ccgtagcgtc ccgacccgat
    10261 ttcaccggcg atgctgtcga ggaccgcggg gttgaggcgc accgaggcgg gcgtggcagt
    10321 aggccaggtc ctgcctggga atgcgctttg cgcggctccg gccacccgga ctgacagagc
    10381 aagcagggcg gcgagcgacc acactttcat gaagttcatc agcgcctcgg atggcgaacc
    10441 atttgggaat cgggttcttc ggtggaatct atcgtacccg gccgaggaac ctgtcttgaa
    10501 ccgatcggga ggtatatttc gtggttccat cgagcatgcg acgtctggtg gagcgcggga
    10561 ctcagtcggc cgatactctg atgagtgtcc ctgactgcca cgtccaggca aggacgacat
    10621 gggccatcca catttccggg gcgccttcct ctggaccatc cttgttccgg tccttgccgc
    10681 atgcggaggc gataaccccg cggagcttcc gcgcccgatt ccaccgatcg gaaacagggc
    10741 caccgcggac cgcccagctg aaacctcggg cagccagata cacatcatct acatggttcc
    10801 ggccgacggc aaggacactg gcatcgacac caccggcagg ctggaaaact cggtaggttc
    10861 gtttcagaac tggctggttg gcaaggtcgg aaagcggatc cgccaggaca cgtatcaggg
    10921 aaggctcgac atctcgttct tcaagtcgag caaagcggac gcggacattg ccgcgtccgg
    10981 ccaatcgatc ctgcgcaatc tctacgatga actccacgct gcgggattcg atgatcccgc
    11041 caccaagtac ctcatctact atgacggcac aaaccccaac acctgcggaa acgcgtttcg
    11101 cgatggcccc gccgctgcgc tctacctacg cggatcggcc aatggcaaga gctgcatcgg
    11161 gaggttcgtg acatcgccgg acgcccatcc cggctactgg gagttcgcca tgctgcacga
    11221 gattctgcac accctcggca tggtggacgc gaaggctccg caccacgacg cgacccgacc
    11281 cttgcacgtg gaggacggag aagatctcat gcacggaggt gggggaacct ggcttcccga
    11341 ttttgtcgac cgggacaacg acgactatta cggcgattcg gtcccttcga acgcgaggaa
    11401 tctgaggaac gatccgattc tggtttccgc tcccgccgcc gcgatcgccc gggcccaagc
    11461 gcagctgacg cgtccgcgct tcattccgca cttcgtccat gaagtgctcg agttcaagaa
    11521 gccctgaact cggagggtct tcccggtttg gctccagccc ctcatcccga ccggctcacc
    11581 cgcagaccag agtggcgttg cccttcccgg ccggttcccg gcctgccgcc gtcgagattc
    11641 ccgggagcat gtggcaaagg gaccacaccc tcgcggacgc ttccctgttg acactcgcag
    11701 ccccaaatcc tagtctggga gtgcagccgc tcgtcgccag cggccgtctt catcctccca
    11761 acgcttggta atggcccgag gttatggcca ggtccgttgc ttccgtttcc ttccatttcg
    11821 gagaatccat gagcccgaag tgcatgccgg tccttggctt tgccgccggc gcgctcctgg
    11881 tcgccgcctg tcagaatcag cgggaaccga ccgggccgga acagattccc tcctctcaag
    11941 ccacggcgca gcagctcccc gcccaggcgc aacaacggac aacctggttt cgccaggtga
    12001 gcccggaggt catggcattg ccccggacgg tgttcgccga cgatgacgaa tcctccggcc
    12061 tgctggtgtt cggcgtggaa catgccgaag tggtcgctgg cgtcagggcc gtgctcactc
    12121 ggcacggtct gccggcgtcg gcctaccgga tcgaggtgac cgaaccgatc cgctttgcgg
    12181 ccgacttgca ggacgcgcat cgccccacgc tgggcggtat tcagattgtc ttcagaagct
    12241 ccgcttgcac gctgggcttc aacgtggaac acgccgacgg gccctcgttt gtcacgaatt
    12301 cccactgcag cagccggatc ggcgcgatcg atgggaccga ctactaccag ccggtgaggg
    12361 tcgtcccgcc ccagttcgcc gagatcattg ccgatgaggt cgacgacccc acctacttca
    12421 aggggggagt ctgctcgctg gggaagaagt gccgctacag cgacgcggcg agagccctgt
    12481 accggagcgg gatcgactcg gagcagggcg agatcgcccg gacctcgggc gcgaacaacg
    12541 gttcgatcga tgtgatcggc gatttcacga tcaccgcaca gggcgattac acgacgaaca
    12601 cgctgcacaa agtggggcgc accaccggct ggacttcggg ccaggtggtc ggcacctgca
    12661 taacggtgaa cgtcttcggg tcgaatgttc aactgctctg ccagaacgag gtgcagctag
    12721 ccaacaccca gatcctcggt gcgggcgaca gcgggtctcc ggtgttccag atcgtaagcg
    12781 gcaacaatgt gcgtctggtc gggatcctct ggggaggcag cgtgactgga gacagcttcg
    12841 tgttcagccc cttttcagcg atccagactg agcttgggag tctgaccgcg accctgcctt
    12901 gaccgcgagt ctggaccccg agcgaacggc gagccttgga gctcgccgtt cgtgcttcga
    12961 ggcagcgggc ttcctacctt ctaccgaccg ggtttttggt tcgccgtggg gaaagccgcg
    13021 cgggatacga accgatcttc tcgaccgtgt attcgctggc ccagaagtca gcggggcctt
    13081 cgctgtccgg cgccttgttg caaaatggct tgagaccgcg cttgagacac gccgcgctac
    13141 gcgccaatgc aaacggccta cgccgttcag ccggttgaag tcggcctccc caatgaggca
    13201 gcccactctt catgtggtct tcccagacct ttcataccct atcgggaaga tttcgtgatt
    13261 acggcccgac cctctaccac tcctaaccaa gtggaacaga gcggaagggg atcgcgccgg
    13321 gctgcgttat tgttgagagc cccttccttc cattacacga gcgctcagga ggcatccgat
    13381 gtcgttcgag tcacgcgctg ctttcgccac gctcctgtcc ctgcttgcgg cctggctggt
    13441 ccctgcctgc cccgccgccg cccaggaggg tcctgtcaag ggcaacctgg gcatcaccat
    13501 ctcggcgctt cccgccaggc ttacaccggg tgactcggtg cggctcctgg gcagcaccgg
    13561 cctgaccgga agctcgagcc aggtgagcat cgtggtgcgg ccaccgggaa agccgcccgt
    13621 caccctgcag gtcaagccgg gtacccaagg ggcttatcag atccgattcg gcgctaccgg
    13681 cgggctaggc acctatcagg tcgaggccgt cgcccccgac gggaagggca aggcaagcac
    13741 ctccttcacc atcgtgagtg cggtcgcgtt agcggaggaa acggcccgga aggcggactc
    13801 gctggtgatg ctgggatcgc gggtggtgga ccgggtgcag caggcggtcg acggccttcc
    13861 cgcgtccccg gcgaaaaacg aggtcaagga gaagctggat aaggtggaca gcgagctggc
    13921 caaactgccg cagcaggtgg ccgcgctacg acagcagatg agcaaggtct tcgccgcccg
    13981 caccaaggtg gccaagccca ttcccgagtg ggtggattac gaggaggagc tggtccagtg
    14041 ggaagctgac gcggaccagg ccctggccaa gctggaaaag ctggcggcgc ccaccgcggc
    14101 cgcgacccag ggatgcagcg atctcgaccg ttataacgag atgctgacgt tcacctccga
    14161 ggcgatgaac tacctcgcgg cgccgttcga tctgagccgg ggattctgga ccgacaagat
    14221 cccgggcggt ctggtggcgc ggagcagcgg cgcccaggct ctcaccagcg ccgaacggtt
    14281 cgcgctggtg gaaacgatga agatcggcgc cgccgcgctg cagggccccg ccggcatcgt
    14341 gagcgccgtg cccggcctgc tgctcgatac cgcccagtgg ttcgtccagg actacttcgg
    14401 caagttttgc gagaagtggg aaggaccgat gcagggcacc tttctgggcg agtccttcac
    14461 ccgccagggt gagccgttct tcgactacac catcatgctg gacggcaagc tgatgctgct
    14521 ctatcccaag aacgtaccgg cgggcaagcc ggtatcgctc caggggtatt tcgagggaaa
    14581 cggccggttc gagatccgcg acaaccccaa gcccatcgcg cggctggtac ccggctcggt
    14641 gctgttccac cggatcaccg ctccgccggg atcgggttac tgggatgagc tgggccaggc
    14701 cagccgggga ctgctgcccc actcgttccg gattccggtg aagggaatca tggccggcga
    14761 ctcgatcatg ctgacgctgc aaccggccga tcacgacttc ggccctaccg tggccggggt
    14821 ctccacctgg gtgatcatgc cgctgggcgg gctggtgccc gaggtcatca acgccaagat
    14881 cggactgcag aaggcgcacc cgatcatcga acgagtaatc cggcgccggc cggtgctccg
    14941 gttcgtcacc gcgggcaaga gcatgaccgc ggaggcgacc ttcagccggg ataccaccaa
    15001 caccgagaag acggcccggg tccgcaccac cctcaaggtc aaggcatgca atcccggctg
    15061 cctgccgctt ccgggcgggg gcaaactctg aaccggccgg ggctccggat gcgttaccac
    15121 agcttgttgc tgttgccggc cgccgggctg cttcccggca ccgcacgggc ccagtcgccc
    15181 caggtgccgt ttgccccggc gctgcagctc acctgggcca gctccctgtc gggcgagccc
    15241 gactacgaga ccgtgatcac ggtcaagcag gtcgacagcg gcgaggcccg attgactatc
    15301 gcatggaatc gcggggccag gcgcgagtgg caatcggtcg agcggcgggt ctccagccgc
    15361 gagcggcggc tggcgcgttc cttctacttc tactcttcga ccagcaatcc acgcgagtac
    15421 cgggggacca cccaatcgtt gctgtcaggt gcggttctga accagctcaa aagcgccggc
    15481 cgggccgatg tcgtgctgct ggtacccagc ctctcgaacc tcccctttcg cggcacgctg
    15541 cagcgagccg gtaccggggc cgagccgttc ccggttctgc tgaatggcaa gcgggtgatg
    15601 ctgcccggga tcagagctcg cggccagttc aagggtgatc gcctgctgga cttcgacgtg
    15661 ctggtctggg acaatccgga ggcgccctgg gtgctcgagg ccacctcgaa gcaggtggaa
    15721 gaggaccgcg gcggccggcg gctcctggtg cggatcggca ccgacgcgcg ggggcaggag
    15781 gtagcctcga cgctcgatga gcgctgcact gtgagcatcc acgacatcta cttcgccacc
    15841 ggctcggatg cgctggattc cacctccgcg cccgcgctcg gagcgatcgc acggaccctg
    15901 gagagccatc cggactggcg catcacgatc gtgggtcata ccgacagcat cggggccgac
    15961 gccgccaacc tcgatctgtc acgccggaga gcagagcggg tgcgtaccac gctggtgggt
    16021 gagtatggca tcgcggccga ccggctcaag tccgacggac gaggcgaaaa gcagccgctg
    16081 gacgacaacg gcaccatatc aggacgggct cgaaaccgcc gggtcgacct ggtgcgggcc
    16141 tgcaaaccaa gcagttgagc ggaggaggtt gttatgcgga tcggaacctg gccggccgtg
    16201 atggcgatac ttgcggtggc ttgtggggga ggagccgaga gcgccggcaa ggacgccgcc
    16261 cccgatgcgg ccgcgctgcc gtcgggcccg gatccgtgtt ccctggtctc gcagtcggac
    16321 gtggaggccc tgatgggtcc gctggccgag ccgccctatc gggtggacaa caaccgcagg
    16381 ccggccgtcg cgggcgaggg ctgtttctac cgggcacgcg accggcgcaa cgtcaccatc
    16441 ctggtggatt gggaggacgg cgagctgggc ttccagatgc tggccggcac cggcgccagc
    16501 atctcggaca ttctcaccgg ctacgacgcc accaccgaca cgctggaagg caactgggac
    16561 aaggtggggg cacccttcgg acagttcatt gtgctcaagg gcaagacctc gatccagatc
    16621 gacccgctcg gctcccggat cgggctcgac ggcgcggcgc ggctggcgtc gatcgcgatc
    16681 ggacggctgg ggtcaccgct cgactacagc ggcgccaagg ccacccaggc ccgagccgag
    16741 gacacgcccc gctcccgcaa tccgtgcgag ctggtgaccc gacaagaggt cgaggcactc
    16801 atgggtccgc tgctggcgga tcccacaccg gcggaagacg gctcgggatg cgagttccgc
    16861 accgataaga agttcctgaa cgagccggtg gtgcgaaagc tcgaggtcca gtggaccgac
    16921 ggcttctaca cgctggggca ggaacgatcc gccaccggaa tggcggccaa ggccatgcag
    16981 atgcacgtgg atcccgagac gcccacgctg agccgggaag ccgtggggga agccgagccg
    17041 tgggacgagc ggatgaccct gatgcccgga ctgatcaccg tggtgaagca agatgtgctg
    17101 ctcaagctgc cgggcgacgg cgtgttcggg tttgatgagg agaaggcgct gaagctactc
    17161 aggatcgcag ttggacggct gtaattctac gcccttgagc cgtaagcacg tcgggggccg
    17221 catccggccc ccgacggaca tctccctccg atgtggttag cgggtagcgg ccggcgcgtt
    17281 cgagttccag atctggcagg cacagagcca cttgccgtga tcgtcgcggc ggtaggtgtt
    17341 cacgaatttg ccgttcgtct ttgtcgacgt ccctttcgcc tcgatcgtga tggtgtagtg
    17401 tccgtagccc accgcgaaat ggtcctgccc ctcgatgtgg tcaaactcgg gatcgaattg
    17461 cttgacggcg ggatacgcct cgagccagga ccggaccttc ttgctgccgg agaccattgg
    17521 ctcatcgggt ggaaggatga cgaaat
//
LOCUS       DASWKS010000043        10162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_760465, whole genome shotgun sequence.
ACCESSION   DASWKS010000043 DASWKS010000000
VERSION     DASWKS010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_760465"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1665)
                     /locus_tag="VGA78_01495"
     CDS             complement(<1..1665)
                     /locus_tag="VGA78_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9892560.1"
                     /translation="MRIRLFALASVLVALAALIPFGAAAGQARGGMSPEAKARRWATE
                     KELDSLAVIDRKVMMPMRDGIRLATDIYYPRDSSKKYPIIFVKTPYNFNFWDVRNGVP
                     SDMTGALTAIKRGYAYVVQNERGHFFSEGNYDILGPPRTDGYDAMEWMVKPSWSNGKI
                     GVIGCSSTAEWQMAVAAMAPPGLAAMIPQGYGAGVGRVAPYFEQGNWYRGGATQMLFI
                     AWLAGEQNQIRPTFPATATQGELIAASRLFDLGEQAPPVDWSAALRHLPVQDIIKAAG
                     GPRGIFADSMPVPTGGRMAQRAPNDPAWYRGGLFHDDMTINVPGLWVMSWYDVSVGPN
                     LATFNHVRKSARPDIANQQYAVIAPTLHCSFTRATENTLVGERSMGDARYDFSALHYA
                     WFDRFLKGEANGLLDTMPKVRYFTMGLNRWQTSSTWPPQGAQPLTFYLSSGGRANTLN
                     GDGALIPKTPSAAKPDSFSYDPRNPVPSYGGNVCCTGNAVQGGSFDQRKMEERPDVLV
                     YSSEPLKEAMEVSGPVDVTLYVASDVKDTDFTVKLLDVYPDGRAFNL"
     gene            complement(1738..3207)
                     /locus_tag="VGA78_01500"
     CDS             complement(1738..3207)
                     /locus_tag="VGA78_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892561.1"
                     /translation="MKRVRVLLCCGALVLLTSAHIGSPDTWFAGSAGPYPVRVLVRSP
                     GVIPGLADVTIWTDSGAQRVWVTPAYFNAGDRGLPPPDTARTVGGRPGTWSVQLWIMI
                     PGSYSVRVTVDGDQGTGTAIVPISAVATQVREMDPKLGIVLAVMGLFLVTGLVTIVGA
                     ATRESVLAPGEEADPRRRRRARIAMAATAIALALVLWGGKAWWRAEDRAYRRGLGQQW
                     RTETVVFGEGAARRLRLIIADSVWSERRVTPLVPDHGKLMHLFLASADGGDAFAHLHP
                     VSLDSSNFETPLPPLPAGQYRLFADVTHESGFARTLTGSVQLPGADSSGAALDLDDGW
                     RIGPPDDSSAALTGGARLVWEGRRTLRANEEADLRFAVREADGSPGAVEPYLGMAGHA
                     AVIREDGGVFIHLHPMGTISAAAQVLLVERTAADTARGALGKRLSEAGAFSRHSGHAT
                     LPGSFEFPYAFPDSGAYRVWVQVRRNGRIETAAFRAIVE"
     gene            complement(3204..4388)
                     /locus_tag="VGA78_01505"
     CDS             complement(3204..4388)
                     /locus_tag="VGA78_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892562.1"
                     /translation="MAIPVSVDAPPVSAPAPAVVLVTRAGVVAAALIVTGLIWDIAWH
                     RSVGRDTFWSPPHLVEYAAAIIVGLSCGWLILRTSFGGSPAERGAMVRFWGFRGPMGA
                     WVSVWGALAMITSAPFDDWWHNAYGLDVEIVSPPHMVLLAGMLAIVIGAMLMALARQN
                     RAAEADSGAARWSYAFAAALVLLLLVTATFEYTGFPNLWRGKAFYQISAAVFPFALAF
                     AARTGRLRWPATTTAALYLLASLTLSWILQLVPATARLAPIQNPVTHLVPAPFPLLLV
                     APAFAFDLLYRRWGRKGDWRLSLLLGTAFVIVLVAVSWPAAAFLISPLARNPVFLADQ
                     WDYTVRLGPWRYEYWDSVEEIRAGTRVQPIGLGFLIAVLYAATSSRVGLAWGQWMREV
                     KR"
     gene            4450..4854
                     /locus_tag="VGA78_01510"
     CDS             4450..4854
                     /locus_tag="VGA78_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892563.1"
                     /translation="MPAPALDSVRPAFRAAAAAFVPETAAADAATWERLEEVVATALA
                     ARPPRLRRQILLFIRLLDLLVLARYGKRLAALDSARRSRLLQRLGASRLLLVRRGVWG
                     LRTLVQMGWYGQPEIQQRLGYRASISGWEARQ"
     gene            4851..6323
                     /locus_tag="VGA78_01515"
     CDS             4851..6323
                     /locus_tag="VGA78_01515"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9892564.1"
                     /translation="MTNRRYDVVIVGSGAGGGTVAQALTPLVERGKRVLVLERGPRFR
                     DEDFTGRELEMAPDLYVDGGGFLTADGSMTLAFGQGYGGSTIVYTGTSLIAPERVIRH
                     WNVPGLDYADVERRSRRYVSENNVHLLPSELINDNNRLFVEGCVNAGYHAEQFPLNLR
                     GCRGSSLCNLGCPNAAKQGTNRVQLPNAERGGVEVVTRAEVLALGDRRLQVRVSPRPA
                     GGKGTEPEWAPGEYQVDAERVVLAAGAIGTSTILLRSRLPSLPRSVGTGFTCHPAHIL
                     VGEHPETITNDVGHPKSFFVDRAESERFVLETCMYFPFITAKNLAGFGALHSVLMHAF
                     PRLQMILVLACDRAIPENRVTVTRAGRPVVHYRFTPEVIRAMVQATRASARIFFAAGA
                     VRVHAPSADPPLIEAGDAGRIDQLIDQRHFQRGRISISAAHLMGGCGMGRVTDEWGRV
                     HGLPWVRVADASLFPDSLEINPYLTVMALADRVAEGVLNG"
     gene            6357..8141
                     /locus_tag="VGA78_01520"
     CDS             6357..8141
                     /locus_tag="VGA78_01520"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9892565.1"
                     /translation="MPTLNGAQLVVRALEDEAISVAFGIPGTHNIELYDVLARSSVLP
                     VLVTDEQSAGFMADGYWRASGRLACVNLVPGAGFTHALSGIAEAWMDGVPMLVLGCGI
                     RQDVRRAFQLHDIDQLAMAAPVTKATFRPMSGAELYPTIRKACALARAGTPGPVMVEV
                     PVNLYLTRHDIDPATLTAPAPLPGPRQASEDLAQAAEFLGRSQSMPLLYVGLGAAPAG
                     ADLVRLAETLGAPVATTIQGKGVFPESHPLFLWNGFGNSAPPFAREIAARCDRVLAIG
                     CRFSEVGTAGYGLTLPGPLCHVDINPEVLGRNFPAELGITADAGRFVRALLGTLSGPS
                     AVVGGIASSITPAGPVVPSPPLDLAAAIAAGHAGVRQEWTRQRSADRVSPPLLLQRLQ
                     AILGPDTIFTTDSGNGTFLAMECLRLEQPGRFLAPVDYSCMGYSVPAALGAKLARPDA
                     PVIALAGDGAFLMTGLECLTAAARGIAVGVVVLRDRELAQITQFQETAFNRPVASALP
                     DYDLSALGRGMGLECLELSRDADIDAVLEGMKARLEQGRPVLVDAAVDYSEKTYFTRG
                     VVKTMLGRLAWKDRLRFVARAVVRKVTG"
     gene            complement(8241..9881)
                     /locus_tag="VGA78_01525"
     CDS             complement(8241..9881)
                     /locus_tag="VGA78_01525"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX9892566.1"
                     /translation="MPSARHPLNRALEAFGVLSIVATAVVTALLVIEAEYRVRVQEQG
                     RRLQVVARAAVDLLDLLPEVQAAPVRALPDRVTAALHDLARGEGDADGISVTADGGRV
                     LWATGDVTYHDAAAARRDWRPAPGETRIVSAERRRFALGALRSNDWLVTLSAQVPARS
                     VSPLLLRDVGMLVLVGLLIFYLGWRLLDRRMFQPLSAAEAVTVRVSAGDLRIDQDAIG
                     RVGGGPLTEALRKMVVALTRLVSAIRGSAEEAAALGEEISAATEEMTSSTQEVAATTQ
                     ELTDRATKQASTVRLVADEAGRILAISQELASSSLQAADRNAALVRLAETHRSGLRTS
                     TGELTRLADELEQGTQEAEALAQAADEIEEFIAQTAAIAKRTHILALNAAIEAARAGE
                     EGLGFTVVADEVRRLAGQAGEAAAHTRSTMQSVVHRVQTARERLLRLGQSSLVARDAA
                     QSAASGLDQVVDQAVTNHDWTRGISLSSQDVRGLIESIATRSTDLAAGTEDVAAAAQQ
                     IAAAAEELNASTEEIAASATRLAEASVRLTGEVGKFKL"
     gene            9948..>10162
                     /locus_tag="VGA78_01530"
     CDS             9948..>10162
                     /locus_tag="VGA78_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892567.1"
                     /translation="MTSLPTAELLALQNALAGRFAVERLLGQGGMGLVFLARDLTLER
                     PVAIKLLAPSLARDPAYRQRFLREARAA"
BASE COUNT         1612 a         3513 c         3466 g         1571 t
ORIGIN      
        1 gaggttgaag gcccgaccgt cggggtacac gtccagcagc ttcacggtga aatcggtgtc
       61 cttgacgtcg gacgcgacgt acagggtgac gtcgaccggt ccgctcacct ccatcgcttc
      121 cttgagcggc tcggaactgt agaccaggac atcgggccgc tcctccatct tgcgctgatc
      181 gaacgagccg ccctggaccg cattcccggt gcagcagacg ttgccgccgt acgaggggac
      241 cgggttcctg ggatcgtagc tgaagctgtc gggtttggcc gcgctgggag tcttcgggat
      301 cagcgctcca tcgccgttca gggtgtttgc ccggccgcca ctcgacagat agaacgtgag
      361 cggctgcgcg ccctggggcg gccaggtgga ggaggtctgc caccggttga ggcccatggt
      421 gaagtagcgg accttgggca tggtgtcgag cagtccgttg gcttcgccct tgaggaagcg
      481 atcgaaccag gcgtagtgca gggcgctgaa atcgtagcgg gcatcgccca tgctccgctc
      541 gcccaccagg gtgttctcgg tggcgcgggt gaagctgcag tggagggtgg gcgcgatgac
      601 ggcgtactgc tggttggcga tgtcgggccg ggcgctcttc cggacgtggt tgaaggtcgc
      661 caggttgggg cccaccgaca catcgtacca cgacatgacc cagagtccgg gcacgttgat
      721 ggtcatgtca tcatggaaga ggccgccccg gtaccaggcc gggtcgttcg gcgcgcgttg
      781 ggccatccgg ccgccggtcg ggaccggcat cgagtcggcg aagatacccc tcggaccgcc
      841 cgccgccttg atgatgtcct gcaccggaag atgtcgcagc gccgccgacc aatcgaccgg
      901 cggggcctgc tcccccaggt cgaagagccg ggaggcggcg atcagctccc cctgggtagc
      961 ggtggcggga aacgtcgggc ggatctgatt ctgctctccc gccagccagg cgatgaacag
     1021 catctgcgtg gccccgcccc gataccagtt gccctgctcg aaataaggcg ccacccgccc
     1081 cacgccggcc ccgtacccct gggggatcat ggcggcaagc cccggcggag ccatcgcggc
     1141 cactgccatt tgccactcgg cggtggaaga acagccgatg accccgattt ttccgttgga
     1201 ccaggacggc ttgaccatcc actccatggc gtcatacccg tcggtccgcg gtggaccgag
     1261 gatgtcgtaa ttcccctcgg agaaaaagtg gccccgctcg ttctgcacca cgtaggcgta
     1321 gcctcgcttg atggcagtga gggcccccgt catgtccgag ggaacgccgt tgcgcacgtc
     1381 ccagaaattg aagttgtacg gggtcttgac gaagatgatc gggtatttct tcgaactgtc
     1441 cctgggatag tagatgtcgg tggcgagccg gatcccgtcc cgcatgggca tcatgacttt
     1501 ccggtcgatg accgccagtg agtcgagctc cttctcggtc gcccagcgcc gggctttggc
     1561 ctccggggac atgcctcctc tggcctgacc ggcggccgcg ccaaagggaa tgagggccgc
     1621 gagggcgacc aggactgacg ccagagcgaa aagacgaatg cgcatgttca gggctcctga
     1681 agatggccgg caagatcctt cgctacgctc acgatgacaa ctcacacctg ccatccgtca
     1741 ctcaacgatc gcgcgaaaag cggcggtctc gatccggccg ttgcgccgga cctggaccca
     1801 gacccgatag gcgccgctgt ccgggaacgc gtacgggaat tcgaagctgc ccggcaaggt
     1861 tgcatgcccg gagtggcggc tgaacgcgcc tgcctccgag agccgcttgc cgagggcgcc
     1921 gcgggcggta tcggccgcgg tgcgctccac caaaagcacc tgggccgcgg cggagatagt
     1981 ccccatcggg tgcagatgga tgaacactcc gccgtcctcg cgaatcaccg cggcgtgtcc
     2041 cgccataccg agatagggtt ccaccgctcc cggcgaaccg tccgcctccc gcaccgcaaa
     2101 ccggaggtcc gcttcctcat tcgcgcggag cgtccggcgg ccttcccaga ccagcctcgc
     2161 ccccccggtc agcgccgcac tgctgtcgtc gggtgggccg atccgccatc cgtcatccaa
     2221 gtcgagcgcc gcaccggagg aatcggcccc cggcagttgg accgatccgg tgagggtgcg
     2281 ggcaaatccg ctctcatggg tcacgtcggc gaagaggcgg tactggcctg ccggcaacgg
     2341 gggcaacggg gtctcaaaat tggaggagtc gagtgagacc gggtgcaggt gcgcgaaggc
     2401 atcgcctcca tccgcgctcg ccaggaacaa gtgcatcagc ttgccatggt ccggtaccag
     2461 cggcgtcact cggcgctccg accagaccga gtcggcaatg atcagccgga ggcggcgcgc
     2521 ggcgccctcc ccgaatacta cggtctcagt ccgccattgt tggcccaggc cgcggcggta
     2581 ggcccgatcc tccgctctcc accaggcctt gccaccccac agcaccaacg ccagcgcgat
     2641 cgcggtggcc gccatcgcga tccgggcccg gcgacgccgc cggggatcgg cttcttctcc
     2701 cggagcgagg acgctctcac gggtggcggc gcctacaatg gtcacgagtc ccgtcaccag
     2761 gaacagcccc atcaccgcca ggacgattcc cagcttggga tccatctccc ggacctgggt
     2821 ggcaaccgcc gaaatcggaa cgatggcggt tccggttccc tggtcaccgt cgacggtgac
     2881 ccgaacgcta taggacccgg gaatcatgat ccagagctgt accgaccacg tcccaggccg
     2941 cccaccgacg gtgcgcgcgg tatcgggcgg gggcagtccc cggtcaccgg cgttgaaata
     3001 ggccggggtg acccacactc tttgcgcgcc ggaatcggtc cagatggtca cgtccgccag
     3061 tccgggaatc acccccgggg agcgcaccag cactcggacc ggatagggcc ccgccgaccc
     3121 ggcgaaccag gtatcgggcg agccgatgtg ggccgaggtc agcaggacca gagccccgca
     3181 gcagagcaga acccggacgc gcttcaccgc ttgacctcgc gcatccactg gccccacgcc
     3241 aggcccaccc gcgaggacgt cgcggcgtag agcaccgcga tcagaaaccc gagaccgatg
     3301 ggctgcaccc gcgtgccggc ccggatctcc tcgaccgagt cccaatactc gtatcgccag
     3361 ggacccaggc ggaccgtgta gtcccactga tcggccagga acaccgggtt tcgcgccagg
     3421 ggcgagatca gaaacgccgc cgcgggccag ctgaccgcca ccaagacgat cacgaaggcg
     3481 gtgcctaaca gcagcgagag acgccagtcg cccttccggc cccagcgccg gtacagcaga
     3541 tcgaaggcga atgcgggagc caccagcagg agcggaaagg gcgcgggcac caggtgggtc
     3601 accggattct ggatcggtgc cagccgggcc gtggccggaa ccagctgcag gatccagctc
     3661 agggtcaggc tggcgagcag gtacagcgcg gcggtggtgg tcgcgggcca gcgcagtctg
     3721 ccggtgcggg cggcgaaggc gagcgcgaag ggaaagaccg ccgccgagat ctggtagaaa
     3781 gccttccccc gccagagatt ggggaatccg gtgtactcga aggtggcggt caccagcagc
     3841 agcagcacca gcgccgccgc aaaggcgtag ctccagcggg cggcgccgct gtcggcctcg
     3901 gccgcgcggt tctgccgggc cagcgccatc agcatcgccc cgatgacgat cgccagcatc
     3961 cccgccagca acaccatgtg gggcgggctc acgatctcca catcgagccc gtaggcgttg
     4021 tgccaccagt cgtcgaatgg ggcgctggtg atcatcgcca gggcgcccca gaccgagacc
     4081 caggccccca tcgggccccg gaatccccag aaccgtacca tggccccgcg ctcggccggg
     4141 ctgccgccga agctggtgcg gaggatcagc cagccgcagg acagaccgac gatgatggcc
     4201 gcggcgtact cgaccagatg gggtggcgac cagaaggtgt cccgccccac actgcgatgc
     4261 cacgcaatgt cccagatgag tccggtcacg atcagcgccg ccgccaccac cccggctcga
     4321 gtgaccagca ccacggcagg cgccggggcg gacaccggtg gggcatcgac ggaaacagga
     4381 atagccatga cctgagtcta ctctgctgcg acagtcgcgc gaggggagca tggctgatac
     4441 actccgaccg tgccggcccc agcgctggat tcggttcgtc ccgccttccg ggcggcggcg
     4501 gcagcattcg tcccggagac ggcggccgcc gacgcggcca cctgggagcg gctggaggag
     4561 gtcgtggcca ccgccctggc cgcgcgccca ccccggctgc ggcggcagat cctgctcttc
     4621 atccggctgc tggatctcct ggtgctggcc cgctacggta agcggctcgc ggcgctcgac
     4681 tcggcccgcc gcagccggct gctgcagcgg ctcggggcgt cccgtctgtt gttggtgcgg
     4741 cgcggcgtct ggggacttcg gaccctggtc cagatgggct ggtacgggca acccgagatc
     4801 cagcagcggc tgggttatcg cgcctcgatc agcggctggg aggcgcggca atgaccaatc
     4861 gccggtacga tgtggtgatc gtcggctcgg gcgccggggg tggcacggtg gcgcaggccc
     4921 tcaccccgct ggtcgagcgg ggaaagcgcg ttctggtgct ggagcgagga ccgcgcttcc
     4981 gggacgagga cttcaccggc cgggagctcg agatggcgcc ggatctctac gtcgatggcg
     5041 gaggattcct caccgccgac gggagcatga ccctggcatt cggccagggg tacggcggct
     5101 ccaccatcgt gtataccggc acctccctaa tcgcacccga gcgggtcatc cgccactgga
     5161 acgttcccgg tctggattac gccgacgtgg agcgccgcag ccggcggtac gtgagcgaga
     5221 acaacgtcca tctgcttccc tccgaactga tcaacgacaa caaccggttg ttcgtcgagg
     5281 ggtgcgtcaa cgccggttac cacgccgagc agttcccgct caacctgcgc ggctgccgtg
     5341 gctccagcct gtgcaatctg ggatgtccca acgcggccaa acagggcacc aaccgggtgc
     5401 agctgcctaa cgccgagcgg ggcggggtgg aagtggtcac tcgcgcggag gtcctcgcgc
     5461 tgggggaccg gcggctccaa gtgcgggttt cccctcggcc ggccgggggc aaagggaccg
     5521 agccggagtg ggccccgggc gagtaccagg tcgacgccga acgggtggtc ctggcggcgg
     5581 gggcgatcgg gacatccacc atcctgcttc ggtcccggct ccccagcctc cctcgctcag
     5641 tgggcaccgg cttcacctgt cacccggcgc acatcctggt cggcgaacac cccgagacca
     5701 tcaccaacga cgtggggcat cccaagagct tcttcgtcga tcgggccgag tcggagcggt
     5761 tcgtgctgga gacctgcatg tacttcccgt ttatcacggc gaagaatctg gccggcttcg
     5821 gtgcgctcca cagcgtcctg atgcacgcct tcccgcgact ccagatgatc ctggtgctgg
     5881 cgtgcgaccg ggccattccg gagaaccggg tgacggtgac gcgggcgggc cggccggtgg
     5941 tgcactatcg gttcaccccc gaggtgatcc gggccatggt ccaggctact cgcgcctcgg
     6001 cccgcatctt cttcgccgcc ggcgcggtgc gggtgcacgc gccctcggcc gacccgccgc
     6061 tgatcgaggc gggtgatgcc gggcgaatcg accagctcat cgaccaacgc catttccagc
     6121 gggggcggat ctcgatatcc gcggcccatc tgatgggggg atgtgggatg ggacgggtca
     6181 ccgacgaatg gggacgggtg cacgggctgc cttgggtccg ggtggcggat gccagccttt
     6241 ttcccgattc attggagata aacccgtacc tgacggtgat ggcgttggcg gatcgggtgg
     6301 cggagggagt attgaatggg taaggcacgt tcctcgttcc gggaacgagg cccagagtgc
     6361 cgaccttgaa cggcgcccag ctcgtcgtcc gcgcgctgga ggatgaagcg atctccgtcg
     6421 cctttggcat ccccggcacc cacaacatcg aactgtacga tgtgctggcc cggtcctctg
     6481 tcctcccggt attagtcacc gacgagcaga gcgccggatt catggccgac gggtactggc
     6541 gcgcgtcggg ccgcctcgcc tgcgtgaatc tggtgccggg ggcgggcttc acccacgcac
     6601 tctccggcat cgccgaagcc tggatggacg gggtgccgat gctggtgctg ggctgcggca
     6661 tccggcagga cgtacgccgg gcctttcagc tgcacgacat cgatcagctg gccatggccg
     6721 cccccgtcac caaggccact ttccggccga tgagcggcgc cgagctgtac cctaccattc
     6781 gaaaggcgtg tgccctcgcg cgggcgggaa cgcccggccc ggtaatggtt gaggttccgg
     6841 tcaatctcta cctcacccgc cacgacatcg atccggccac gctgaccgcc ccggctccgc
     6901 tgcccggccc ccggcaggcg tcggaagacc tggcacaggc ggccgagttt ctgggacggt
     6961 cccaaagcat gccgctgctg tatgtggggc tgggcgccgc gccggcgggg gcggatctgg
     7021 tccgcctggc cgaaacgtta ggcgcgccgg tggccaccac catccaggga aaaggggtct
     7081 tcccggagtc gcatccgctc tttctctgga acgggttcgg aaactcggcg ccgcccttcg
     7141 cgcgcgagat cgccgcccgc tgcgaccggg tcctggcgat cggctgccgg ttcagcgagg
     7201 tgggaacggc ggggtacggg ctcaccctcc ccgggccatt gtgtcacgtc gacatcaacc
     7261 ccgaggtcct gggccgcaac tttccggccg agctggggat tacggcggac gcggggcggt
     7321 tcgtgcgggc attgctgggg accctcagtg gtccgtcggc cgtggtcggt ggcatcgcgt
     7381 ccagcatcac gccggcgggg cccgttgtcc cgagcccgcc gctggacctc gccgctgcca
     7441 tcgccgcggg ccatgccggg gtgcggcagg agtggacccg gcaacgttcg gccgaccggg
     7501 tttcaccccc cctcctgctc cagcggctgc aggccatcct cggcccggac accatcttca
     7561 ccaccgacag cgggaacgga acctttctgg cgatggagtg cctgcggctc gagcagccgg
     7621 ggcggtttct cgctccggtc gactactcct gcatgggcta cagcgtcccc gccgcgctcg
     7681 gcgccaagct ggcccggccc gacgctcccg tgatcgcgct cgccggcgac ggcgcctttc
     7741 tcatgaccgg gctcgaatgc ctcaccgcgg ccgcccgcgg gatcgccgtg ggggtggtcg
     7801 tgctgcgcga ccgcgagctg gcccagatca cccagtttca ggaaaccgcg ttcaaccgcc
     7861 cggtcgccag cgcactcccg gactacgacc tgtccgccct ggggcgcggg atgggactgg
     7921 agtgcctgga gctgtctcgc gatgcggata tcgacgccgt gctggagggg atgaaggccc
     7981 ggctggagca gggccggccg gtgctggtgg atgcggcggt cgattacagt gagaagacct
     8041 acttcacgcg cggcgtcgtc aaaaccatgc tgggacgcct ggcctggaag gataggctgc
     8101 gtttcgtagc gagggcggtg gtccggaagg tgacagggtg aatgaatgca gaatgcccag
     8161 tgcccaatgc ccatggcaaa ggggtctacc ccaccccacc tctgcaatgg gcattgggca
     8221 ctcggcattc tgcactcatt ttacaatttg aacttcccaa cctcccccgt cagccgaacc
     8281 gaggcttccg ccagccgagt ggccgaggcg gcgatttcct cggtactcgc attcagctcc
     8341 tccgccgcgg ccgcgatctg ctgagccgcg gcggcgacat cctccgtccc ggctgccaga
     8401 tcagtgctgc gggtggcgat cgactcgatc aggccccgga catcctggga cgagagcgag
     8461 atgccccggg tccagtcatg attggtgacc gcctgatcca ctacctggtc caggcccgac
     8521 gcggctgact gggccgcgtc gcgcgccacc agactgctct ggcccagacg cagcagccgc
     8581 tcccgcgcgg tctggacccg atgcaccacg ctttgcatgg tcgaccgggt gtgggccgcg
     8641 gcttcgcccg cctggcccgc cagccgccgg acttcgtcgg ccacgaccgt gaacccgagt
     8701 ccttcctcgc cggcacgcgc ggcttcgatc gcggcgttga gggccagaat gtgggtccgc
     8761 ttggcgatgg ccgcggtctg ggcgatgaac tcctcgatct cgtcggcggc ctgggccagc
     8821 gcttcggctt cctgggtccc ctgctccaac tcgtcggcca ggcgagtcag ctcgccggtg
     8881 ctggtcctga gtcccgagcg gtgcgtctcc gccagccgca ccagcgccgc gttgcgatcg
     8941 gccgcctgca gcgagctgct ggcgagctcc tgggaaatcg ccagaatccg ccccgcctca
     9001 tcggccacca agcggaccgt cgaggcctgc ttggtggccc ggtcggtcag ctcctgggtc
     9061 gtggcggcca cttcctgggt ggaggaggtc atctcctcgg tggccgccga gatctcttcg
     9121 cccagggccg cggcttcttc ggccgagccg cggatggcgc tcaccagccg ggtcagcgcc
     9181 acgaccatct tccgcagcgc ttcggtgagt ggacctcccc ccacccgccc gatggcgtcc
     9241 tggtcgatcc tgagatcacc ggcagaaacc cggaccgtca ccgcttcggc ggcgctcagc
     9301 ggctggaaca tccggcgatc cagcaagcgc cagccgaggt agaagatcag caggcccacc
     9361 agcaccagca tgccgacgtc ccggagcagc aggggagaga ccgaccgggc cggcacctga
     9421 gccgacagcg tgaccagcca atcgttgctg cggagcgcgc cgagggcaaa ccgcctccgc
     9481 tcggcggaca cgatacgggt ctcaccgggc gccggacgcc agtcccggcg ggccgcggcc
     9541 gcgtcgtgat aggtgacgtc cccggtggcc cacagcaccc gcccgccgtc cgccgtcacg
     9601 ctgatgccgt cggcgtcgcc ttcgccccgg gcgaggtcat gcaacgctgc ggtgacccgg
     9661 tcgggcaggg ctcgaaccgg agccgcttgc acctcgggaa gaaggtccag cagatcgacc
     9721 gcggcccggg cgacgacttg caagcggcga ccctgctcct ggacccgaac ccggtactcg
     9781 gcttcgatca ccagcaacgc cgtgaccacc gcggtggcga cgatcgacaa caccccgaag
     9841 gcctccaggg cgcggttgag cgggtgacgg gctgatggca tggggtcagt acaagataca
     9901 agagccggct tgccgtcggc ggaggcaagc accatcctcc atccacaatg acttcgctgc
     9961 ccaccgccga actgctcgcc ctccagaacg ctctggccgg ccggtttgcc gtggagcggt
    10021 tgctgggcca gggcggcatg gggctggttt tcctggcccg cgacctcacg ctggagcggc
    10081 cggtcgccat caaactgctg gcgccgagcc tggcccgaga tccggcgtac cggcaacgct
    10141 ttctccgaga ggctcgcgcg gc
//
LOCUS       DASWKS010000044        16672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1131009, whole genome shotgun sequence.
ACCESSION   DASWKS010000044 DASWKS010000000
VERSION     DASWKS010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16672
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1131009"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1358)
                     /locus_tag="VGA78_01535"
     CDS             complement(<1..1358)
                     /locus_tag="VGA78_01535"
                     /inference="COORDINATES: protein motif:HMM:NF014754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEX9892568.1"
                     /translation="MRIGIAYLDGPRLARSMFAASEWVAAGREEINRINVFPVPDGDT
                     GTNLSLTLRAVADALQALGDASLPDTARTMARAAILGARGNSGMMLANFLLGITESLG
                     SRDTATAQDIARALRLGFDRLYGALDEPREGTILTVAREVAQAAERAATDSPDLTSFV
                     KLLHQEGEVALAATPELLSVLKDAGVVDAGGMGFMRMFEGMVRFVEGDPILAAAGPSY
                     LEGDAPASLVEVAEDRDYQFCTEVVVQGEQLPSTNEARTVMHRFGGSVVVVGTGDILK
                     AHVHTDTPEAVFTAAGRWGQVTFTKADDMRAQHRALKHLERRPVALVSDTAADLADSI
                     LDRHRIALVPLQVTFGDRSFKDRVELRPDQFYSRLRGAKELPTTSQPTPADFVKTFRS
                     ALEEAEDVVVVLVSGVLSGTFNAGQTAARVAGLSRVHFVDSRSVSLGQGMLVLRGAEL
                     AES"
     gene            complement(1367..1813)
                     /gene="rplI"
                     /locus_tag="VGA78_01540"
     CDS             complement(1367..1813)
                     /gene="rplI"
                     /locus_tag="VGA78_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEX9892569.1"
                     /translation="MIEVILREDVKSLGKAGALVRVKPGYARNYLLPRGLAYEATEGN
                     RKRIAAEQKARDTHVAAEKTDALKAAEVLSQVALTLSAKAGEGDRLFGSITTQDIADA
                     LSAQGHPVDRRRIELEHPIKQLGAHTVAIRLHPEVHADLRLTVVPE"
     gene            complement(1810..2739)
                     /locus_tag="VGA78_01545"
     CDS             complement(1810..2739)
                     /locus_tag="VGA78_01545"
                     /inference="COORDINATES: protein motif:HMM:NF021506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HEX9892570.1"
                     /translation="MNVVLAPAPGRRIPRGLFGALVVFLISPFPGLCLAAPLAGRLLL
                     ARPRTGREWGWIGGALFLVVAGFAAERNLAQQLLIGYSLAFTGAVLALQRWRPGPVFP
                     RVAVAAVDMATLISVIAWAAGIQWNEVRLVLETQFQQQLTDALAVWNVSSAQAADLRK
                     IVAGLATVYPGVAVLGAIAGGMLSNAMAWYITGGRSGEEPVRFREFRFNDHLIWGAIV
                     TLGLVLAPLRSPWSVLAFNMLLVWAGVYLARGTAVALSMVARWSLSFRLALFISGALL
                     LPYAAGALMLVGLADTWLDLRRGHGPPAQGVMQ"
     gene            complement(2739..2957)
                     /gene="rpsR"
                     /locus_tag="VGA78_01550"
     CDS             complement(2739..2957)
                     /gene="rpsR"
                     /locus_tag="VGA78_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEX9892571.1"
                     /translation="MRVKKGDPIAELRIRVIDYKDDKLLSRFLTERGKILPRRLSGIS
                     ARHQRQLSVAIKRARYLALLPYIKGHQG"
     gene            complement(2957..3301)
                     /gene="rpsF"
                     /locus_tag="VGA78_01555"
     CDS             complement(2957..3301)
                     /gene="rpsF"
                     /locus_tag="VGA78_01555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEX9892572.1"
                     /translation="MIRPYEVVYIFDSTLEDEAINQKLTQFHALIQTPGAEAPRINQW
                     GRRTLAYPIKKRATGYYVIANFDTDVKLLPEFERALRLDDAVLRFLVVLNDHPPTPAQ
                     VGTAKAEFEEEE"
     gene            3403..6444
                     /locus_tag="VGA78_01560"
     CDS             3403..6444
                     /locus_tag="VGA78_01560"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9892573.1"
                     /translation="MELRRRRLLVAGLFAVLQQLGATLPAPTLLAAQATGAVEGRVVS
                     EVGQPLLGALITLTTPEGVLARQVETDRSGGFRIGFLRAGSYLLASRRIGYRAAVPIL
                     VSVASGETVRLTLRLEPVPLALDSLVVSAPRVTITRQDTEFGTRLTARELALLPTFND
                     ARALVAFTPGARPDQIWGAASAQANQYQLDGITVNHPGLGGDFLQPSITWIETVEVRG
                     LGAGAETGNFQGGIVNYLTKSGSNTFEGQARATFESHRLNGSNLGLAEVGSEPKGRYE
                     LDAQVRGPVIRDRLHFALFGQLIGRGQRVPNQVPQQATSLVDPAPDFSELKLLGKLAW
                     RPGSRDLMNGSVSRIDLDGDPSGLTGFESPEAGYRQTFRTTLYSLGWRHTWSERSDLD
                     LKLGGFDSREDRDPYGGGLVPGVLTLQEVDPLAYQNAPFSERRRPTSFDATVTWSVRG
                     RVLGLAHDLKLGGQFQRGGWDFSRLRTGGLTWRPFNRRIAPFWSPTDPATWVSQGVIA
                     STWGGEIRLESEVENNGLFLQDYIEVTSRIRLNPGLRYGRWVGKLTPTTGPEFTAVKD
                     QALEPRIGLVVDLDRRGTLVAKAHWGRYHQSMFAAFFDRVEGADVFTDEQQWNYQGPV
                     FSDPHARFTQAERDQLAAQGLFELAQTISLSETGPVENYRQPYVDQALLGLEKTFGDS
                     WKAQALYVRRRNRNMVALVDKNLASNWTEFRDVQMLTRFFTPIQFGGQNLIMDRLWIS
                     NKDIIYWWELVKSGECPGSILAPCVPPGMTPDQLNALTYNPDYVLTTVPEAKRDFDQL
                     QLSVEARYSTWWASASATVSELEGNFNAVTGPDDYTNGGAGPWVRPNEQLNFFGPLNN
                     QSRFELKAQLGGILPWGFRGGAFLSFFQGDRVTPTLTINPLLLEMAIQEEGKPLPTRF
                     RYFFLFNQAGHRIFVQPRGSFAYPSRTALDLHLERSFPAGRSEFLVTADAFNVFGADA
                     VSSIQTSVNGLFDAFTASPEFGKVRGRMAPRTLRFGAAYRF"
     gene            6644..7297
                     /locus_tag="VGA78_01565"
     CDS             6644..7297
                     /locus_tag="VGA78_01565"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEX9892574.1"
                     /translation="MNIGQPRTVGSEDATDPFDRPFTSAIWKEPVQGPIWLDATGLHG
                     DRVADTKHHGGPYRAALMYSGDHYPRWRSEWNRKDIGPGGFGENLTVRGVVEATVCLG
                     DVFEVGEALVAVTSPRTPCHILARRHGRRDLVETVRANHRHGWYLRVLRPGWIEAGQP
                     VALRERPYPQWPIDRVAEVKWNRKQCPEEAALLAQCPALIPNWKAALREGGGVRVEG"
     gene            complement(7429..8175)
                     /locus_tag="VGA78_01570"
     CDS             complement(7429..8175)
                     /locus_tag="VGA78_01570"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9892575.1"
                     /translation="MGRIPRRALLLAGLLLLPAGLAAQSSIAGRVLDDSTSKPIAGVE
                     LLIQALDRRTVTDTAGAFRFDNLTSGIHFVLVRRIGFRPVQLRAILVADDTLETTVKL
                     TAAAVELAPLEVTVSAIPPGMEAFEERRRAGLGHFIDAKVLRQAEHRTLADLFRTVSG
                     VSLRYGRGNKIILINNRDRCAMQIYLDGIKIYEPRTGGGRAGEPPDINQFSIAQLEAI
                     EIYRGPAETPAQLGGTGGACGTVVLWTRRR"
     gene            8369..8791
                     /locus_tag="VGA78_01575"
     CDS             8369..8791
                     /locus_tag="VGA78_01575"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEX9892576.1"
                     /translation="MGDYKQLKVWEKAHQLCLSVMHETERFPTDERDGLAAQLRRSAI
                     SLASSIVEGSDRQSEGDMGRFLQIARGSLWAVHYQLLVARDLGFLAAEQWSELSARCD
                     EIGRMLQGLLTHVRRQSRKGNGARDTQPARRKAVRAGA"
     gene            complement(8835..10883)
                     /locus_tag="VGA78_01580"
     CDS             complement(8835..10883)
                     /locus_tag="VGA78_01580"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001960.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX9892577.1"
                     /translation="MTQYALYAALGGLGGLVVAFLVYQYIRRQPDGSDVMRDIAGLIE
                     SGAMAFLRREYTILLPFLLIVAALLSLAVGTRTGVAYVFGGLCSIAAGLFGMKAATKA
                     NVRTAEAARSSGQGKALRIAFNGGAVMGLAVASLGLIGIGTVTYLVLPAGALDFQTYK
                     AFSEIISGYAMGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPATIAD
                     NVGDNVGDVAGMGADIFESYVGAVIATIALAATSPAIQDAMRANAVLLPILMVLAGLG
                     CSVVGIGAMKLLEKGSPAGALRLTTFIAAGLFILAAWFLTAAFPLGMAARPAMGPFWA
                     VVAGTVAGIAIGLVTEYFTAGKPIRDIAKASLTGPATNIIAGLAVGMMSVLLPLLLIC
                     AAIYVSFWAADLYGIAISAVGMLATVGVTMTVDAYGPIADNAGGIAEMSHLGKDVRKI
                     TDGLDALGNTTAAIGKGFAIGSAALTALALFSAFATAVTPEGQVLSLDLLNPMVVIGL
                     FIGGTLPFVIGALTMTAVGRAAAGMVEEVRRQFREIKGLMEGTAKPDSARCVDISTRA
                     ALREMILPGVTAVAVPVLVGATLGVQALGGLLGGATLSGVMLALFMANAGGAWDNAKK
                     YIEGGEYGGKGSDPHKAAVVGDTVGDPFKDTSGPAMNILIKLMSVVSLVLAPWFASLN
                     "
     gene            complement(10880..11458)
                     /gene="pth"
                     /locus_tag="VGA78_01585"
     CDS             complement(10880..11458)
                     /gene="pth"
                     /locus_tag="VGA78_01585"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEX9892578.1"
                     /translation="MRTILGLGNPGPEYAETRHNAGWWLADHLAARWGLGAWRRERFY
                     RIVIGEREGRTVRLVKPLTYMNRSGAVLAPLHASGEFDPATELLVLVDEAALPVGRFR
                     LRAMGSAGGHNGLKSIEAALGGREYARLRIGVGPMPETGDDLADYVLDIMPSDERTAV
                     TQLLDPMSEAVECWLAEGIEPAMNRFNRRENP"
     gene            complement(11462..12121)
                     /locus_tag="VGA78_01590"
     CDS             complement(11462..12121)
                     /locus_tag="VGA78_01590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HEX9892579.1"
                     /translation="MATQATLTAEPRSTTGKGAARALRRAGRIPAIIYGHNRTPENLA
                     VDVVEAARLIQTIGAAAAIIEVSVAGREPVKVLIREVQRNPVRPSDLLHLDLYEISAD
                     EKIVVEVPVHLVGVPDGVRNSGGVLDHLLHKLEIRVFPRDIPEHIEVDVTTLTIGHQV
                     FVRDVTVANAEVMNDPNQPICTVVPPRTETVEVPAPVAEVAEPELIRKPKAEEEAPAE
                     E"
     gene            complement(12136..13089)
                     /locus_tag="VGA78_01595"
     CDS             complement(12136..13089)
                     /locus_tag="VGA78_01595"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX9892580.1"
                     /translation="MKATALSRAPFLVMSGSANRLLAEELAQHLETQLCQVTVRRFAD
                     GEIFVKIDENVRGRDVFIVQPTNPPAENILELLLLMDAAKRASAARITAVIPYFGYAR
                     QDRKDQPRVAISAKLMANLVSQAGADRVLAIDFHQHQLQGFFDLPVDHLYAAPVFVSH
                     YRQKQFTELVVVASDVGGAKMARGFAKRLNASLAIIDKRRTAANVAEAVNVVGEVEGR
                     DCMIPDDMIDTGGTMTEAVYALKRLGAGKIYICATHALLSGPACERLSQAPVEEIAVT
                     NTIALPPERKIEKLKVLSIAPLLAKAIGYTHSDLSVSSLFE"
     gene            complement(13394..13464)
                     /locus_tag="VGA78_01600"
     tRNA            complement(13394..13464)
                     /locus_tag="VGA78_01600"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13430..13432),aa:Gln,seq:ttg)
     gene            complement(13533..14393)
                     /gene="ispE"
                     /locus_tag="VGA78_01605"
     CDS             complement(13533..14393)
                     /gene="ispE"
                     /locus_tag="VGA78_01605"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEX9892581.1"
                     /translation="MTAPVTVEAPAKLNLFLRVLGREVDGYHSIETLFLRIGLADQLV
                     AEARPAAGVSLTVEGPDLGPERENLAVRAAELVLAALRPSFGVQLHLVKRIPVGAGLG
                     GGSADAAAALQAVNALGGHAVPRHELFQLAARLGSDVAFCFSGASLALGWGRGERLFV
                     VPPPAPAPVLLLSPPVPVRTALAYAWVDQAREAAGRRGSIALDLAALSTWGSIGRMSG
                     NDFEAPVFGRHPEVRAAFEAVAGTHPLICRMSGSGSTVFGIYRNVRDRDDAAMMLGKR
                     FGRVSTTETR"
     gene            complement(14390..15442)
                     /locus_tag="VGA78_01610"
     CDS             complement(14390..15442)
                     /locus_tag="VGA78_01610"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEX9892582.1"
                     /translation="MPTATDAGRGRGRHTLAILLGLALSAVLLWWAMRGLRLADVWTH
                     IRSAPPGPLLLAVFLATLTFPLRALRWRILLRLHDGTPLPLGPAWHALAIGYMANNLL
                     PLRAGELLRAFAASRLAPVRMSTAFASVAVERVFDALTVVAMLVVALLTADLPENIRF
                     GELSVPALARRIGILAAVALLAAALVLARPDPAARLLERLVPWPALSRRLVGLLYGVR
                     DGLAALRSPARLLLLGAWCVAVWCVNAVSFQALFPGFGIDLGFAGAILVQSMIVFLIA
                     APSTPGFVGTFEAGIVTALALYGIPGDRALAYALTYHAATFLPITLLGLWSTTRTIGW
                     GELNRGRTQELGNRPA"
     gene            complement(15426..>16672)
                     /locus_tag="VGA78_01615"
     CDS             complement(15426..>16672)
                     /locus_tag="VGA78_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892583.1"
                     /translation="PPAERLVRITHSMQSLRGLAGLAELAPLPDLLDATDTAVRELQR
                     YPALPPGAAELCATAADAFGRVAREVAERGHPDPELGEAHRFADQLLRTLAGSEVVVS
                     IDTLDGGAPVLQRPEQRFAEPVDLASLGERLRAGADQLRDAPGRAAARLQALVLLAVL
                     RDAPGGLGRRPAGRLVARLVESLTDAAANGDLTSLAPALDAAGQALAEGARGDLEALE
                     ARLDELSGEPEPVPIEQLLEVETVVEIADLAPAPERPALDIPIDRTRLERSLSQYSRM
                     VREDAPVPPLSPALVAPVAEPPLPVPPPPLEPIEFEEIELEPVAIELLAPDEEPVPIE
                     LLAPEPEPVPIELLAPEESPTGVVPIESLLYSGRAALERADQVRQLLEGSLRTASDEL
                     DRVEPLVRELLDLVPLALADGD"
BASE COUNT         2795 a         5565 c         5726 g         2586 t
ORIGIN      
        1 gactccgcca gctcggcccc ccgcagcacc agcatcccct gacccagaga gaccgaccgg
       61 ctgtcgacaa aatgcacgcg ggacagcccc gcaacccggg ctgccgtctg cccggcgttg
      121 aaggtccctg agaggacgcc ggacaccagc accaccacca cgtcctcggc ctcctccagc
      181 gcggagcgga acgtcttcac gaaatcggcc ggggtgggct gtgaggtggt gggcagctcc
      241 ttcgcccccc gcagccggga atagaactgg tcgggccgga gctccacccg gtccttgaag
      301 gaacgatcac cgaacgtcac ctgcagcggc accagcgcga tccgatgccg atcgagaatg
      361 ctgtccgcca agtccgccgc cgtgtcgctc accagggcca ccggccggcg ctccagatgc
      421 ttgagcgcgc gatgctgggc ccgcatgtcg tcggccttgg tgaaggtgac ctgaccccag
      481 cgacccgcgg cggtaaaaac cgcctccggc gtgtcggtat ggacgtgggc cttgaggatg
      541 tccccggtgc cgaccaccac caccgatcca ccgaagcggt gcatcacggt tctggcctcg
      601 ttggtggagg ggagctgttc cccctgaacc acgacttcgg tgcagaactg gtagtcccgg
      661 tcctcagcga cttccaccag ggacgcgggc gcatcgcctt cgaggtagga cgggccggcc
      721 gcggccagga tcgggtcgcc ttcgacgaac cggaccatgc cctcgaacat ccgcatgaat
      781 cccatgcccc cggcatcaac cacgccggcg tctttgagga ccgacagcag ctcgggcgtg
      841 gcggcgaggg cgacctcgcc ttcctgatgg aggagcttga cgaaactggt gaggtcgggc
      901 gaatcggtcg cggcgcgttc ggccgcctgg gcgacttcgc gtgccacggt gaggatggtg
      961 ccttcacggg gctcatccag ggccccgtac agccggtcga accccagccg cagggctcgg
     1021 gcgatgtcct gggcggtggc cgtgtcgcgg ctgcccagcg attcggtgat gccgagcagg
     1081 aagttcgcca gcatcatgcc ggagttgcct cgggcgccca ggatcgcggc ccgggccatg
     1141 gtgcgtgcgg tgtccggaag cgaggcgtcg cccagcgcct ggagagcatc ggcgacggca
     1201 cgaagcgtca gactcagatt ggtgccggta tcgccatcgg gcaccgggaa gacgttgatc
     1261 cggttgatct cctcccgacc cgcggccacc cattccgagg cagcgaacat ggagcgggcc
     1321 agacggggcc cgtccaggta cgcaatgccg atgcgcatcc gggacgctac tcgggaacca
     1381 ccgtcaggcg caggtcggcg tgcacttcgg ggtggagccg gatggccacc gtgtgagctc
     1441 cgagctgctt gatgggatgc tcgagctcga tccggcgccg gtcgaccggg tgtccctgag
     1501 ccgagagcgc gtcggcgata tcctgggtgg tgatcgagcc gaacagccga tcgccctcgc
     1561 ccgccttggc cgacagggtg agcgccacct gcgacaggac ctcggccgcc ttgagcgcgt
     1621 cggtcttttc ggccgccacg tgggtatcgc gagccttctg ctcggcggcg atccgcttgc
     1681 ggtttccttc ggtagcctcg taggcgagac cgcggggcag caggtagttg cgggcgtagc
     1741 cgggcttgac ccgcaccagc gcgccggcct tgcccagcga cttcacgtct tcccgcagga
     1801 tgacttcgat cattgcatga ctccttgggc cggcggacca tgaccgcgcc ggaggtcgag
     1861 ccaggtgtcg gccagaccga ccagcatgag cgcgccggcg gcatagggta acaggagggc
     1921 gccgctgatg aacagggcca ggcggaagga aagactccag cgcgccacca tcgacagggc
     1981 caccgcggtg ccgcgggcga ggtacacccc ggcccacacc agaagcatgt tgaacgccag
     2041 aaccgaccag ggcgagcgga gcggggcgag gaccagtccc agggtcacga tcgcacccca
     2101 gatcaggtga tcgttgaacc ggaattctcg gaagcgcacc ggctcctcgc cgctccgtcc
     2161 gccagtgatg taccaggcca tggcgttgga cagcatgcct cccgcgatcg cgcccagcac
     2221 cgccaccccg gggtacaccg tggccagacc ggccacgatc tttcgcaggt cggccgcctg
     2281 ggccgacgag acattccaga ccgccagcgc gtccgtgagc tgctgctgga attgggtctc
     2341 cagcaccagg cgcacttcgt tccactgaat ccccgccgcc catgcgatca cgctgatcag
     2401 ggtggccatg tcgaccgcgg caaccgccac ccgggggaac accgggccgg gacgccagcg
     2461 ctggagcgcc agcacggcgc cggtgaaggc gagactgtag ccgatcagca gctgctgggc
     2521 gaggttccgt tccgcggcga agccagccac caccaggaac aacgccccgc cgatccagcc
     2581 ccattcgcga ccggtccggg gccgggccag caacagccgg ccggccagcg gagccgcgag
     2641 acagagcccc gggaagggcg agatcagaaa caccacgagg gccccgaaga gccctcgtgg
     2701 tatgcggcgc cccggagcag gcgccagtac cacgttcatc agccctggtg acctttaatg
     2761 tagggcagca gcgccaggta gcgggcccgc ttgatggcca cgctcaactg ccgctgatgc
     2821 cgcgccgaga ttcccgacaa ccgccggggc agaatcttgc cgcgctcggt caggaaccgg
     2881 gacagcagct tgtcgtcttt gtaatcgatg acgcggatcc gcagctccgc gatcggatca
     2941 cccttcttga cgcgcattac tcctcctcct cgaactccgc cttggccgtt ccgacctggg
     3001 ccggcgtggg cggatggtcg ttcaggacca ccaggaaacg cagcaccgcg tcatccagcc
     3061 gcagggcccg ctcgaactcg ggcagcagtt tgacatcggt gtcgaagttg gcgatgacgt
     3121 agtaaccggt cgcccgtttc ttgatcggat aggcaagcgt gcggcgaccc cactggttga
     3181 ttcggggggc ttccgcgcca ggcgtctgga tcagggcgtg gaactgagta agcttctggt
     3241 tgatggcttc atcttcgagc gtactgtcga agatgtaaac cacctcgtag gggcggatca
     3301 tcgacacctt cctctggtcg tggcgccccg ggcctggtgt ggggcccgag gagggtggat
     3361 ttataagccc cgaaacgtag ccaacttagc cccggaacgg tagtggaact tcggcgtcgc
     3421 cggctcctgg tggccggact gttcgcggtc ttgcaacagc tgggagcgac gctgccggcg
     3481 cccaccctgc tggcggcgca ggcgaccggt gcggtggagg ggcgggtagt ctcggaggtc
     3541 gggcagccgc tcttgggcgc gctgatcacg ctcaccacgc cggaaggggt cctggcgcga
     3601 caagtcgaaa ccgatcgttc cggcggcttc cggatcggtt tcctgcgagc cggctcctat
     3661 ctgctggcat cccgccggat cggctatcgt gcggcggtcc cgattctggt ctcggtggcg
     3721 agcggcgaga ccgtgcggct caccctccgg ctggagccgg tgccattggc gctcgactcg
     3781 ctggtggtca gcgcgccccg ggtcacgatc actcgccagg ataccgagtt cggcactcgg
     3841 ctcacggccc gcgagctggc gctcctgccc accttcaacg acgcccgggc cctggtggcc
     3901 ttcacccccg gcgccaggcc ggatcagatc tggggcgcgg cgtcggccca ggccaaccag
     3961 tatcagctgg acggcatcac cgtcaatcac cccggtttgg gtggcgattt tctccagccc
     4021 agcatcacct ggatcgagac ggtggaggtg cgaggcctgg gcgccggggc cgagaccggc
     4081 aatttccagg gcggaatcgt caactacctc accaagtcgg gcagcaacac gttcgagggg
     4141 caggcccggg ccacgttcga gtcccaccgg ctgaacggct cgaatctggg gctggccgaa
     4201 gtcggcagcg agccgaaggg ccgctacgag ctcgatgccc aggtgcgcgg tccggtgatc
     4261 cgggaccggc tgcactttgc cctcttcggc cagctgatcg gccgggggca gcgggtgccg
     4321 aaccaggtcc cgcagcaggc caccagcctg gtcgatccgg cccctgattt cagcgagctc
     4381 aagctgttag gcaagctggc ctggcgtccc gggtcgcgcg acctgatgaa cgggagtgtg
     4441 agccgtatcg atctcgacgg ggacccctcg ggcctcaccg ggttcgagag ccccgaagcc
     4501 ggctaccggc agaccttccg gaccacgctg tattccctgg gctggcgtca cacctggtcg
     4561 gaacggagcg acctggacct caagctgggc ggcttcgatt cgcgggagga tcgcgacccc
     4621 tatggtggcg ggctggtccc gggggtgttg accctgcagg aagtcgatcc gctggcctat
     4681 cagaacgcgc ctttcagcga acggcggcgc cctaccagct tcgacgccac ggtgacctgg
     4741 agcgtgcgag gccgggtgct ggggctggcg cacgatctca agctgggcgg ccagtttcag
     4801 cgaggcggtt gggacttttc ccggctcaga accggtgggc tcacctggcg gccgttcaat
     4861 cggcggatcg ctcctttctg gagccccacc gacccggcca cctgggtctc acagggcgtc
     4921 atcgccagca cctggggcgg ggaaatccgg ctcgagtcag aggtggaaaa caacggcctc
     4981 ttcctgcagg actatatcga agtgacgtcc cggatccggc tcaatccggg actgcgttac
     5041 ggccgctggg tcgggaagct gacccccacc accgggcccg agttcacggc cgtcaaggac
     5101 caggcgttgg agccgcggat cgggctggtg gtggacctcg atcggcgggg aaccctggta
     5161 gcgaaggcgc attggggccg gtatcaccag agcatgttcg cggccttctt cgaccgggtg
     5221 gaaggggccg atgtctttac tgacgaacag caatggaatt accagggacc ggtcttttcc
     5281 gacccgcacg cccgattcac tcaggcagag cgggaccaac tggcggccca gggcctgttc
     5341 gaactggccc agaccatctc cctcagcgaa accggtccgg tggagaacta ccgccagccg
     5401 tatgtggatc aggcgttgtt gggactggaa aagaccttcg gtgattcctg gaaggcgcaa
     5461 gctctgtatg tccgccgccg caaccggaac atggtggcgc tggtcgacaa gaacctcgct
     5521 agcaattgga ccgagttccg cgacgtgcag atgctgaccc ggtttttcac gccgatccag
     5581 tttggcgggc agaacctgat catggaccgg ctctggatct ccaacaagga catcatctat
     5641 tggtgggagc tcgtgaaatc gggagaatgt ccgggctcga tcctggctcc gtgcgtgccg
     5701 ccggggatga ccccggacca actgaacgcg ctgacctaca atccggatta cgtgctgacg
     5761 acggtccccg aagccaagcg cgacttcgac cagctccagt tgtcggtgga ggcccgctat
     5821 tccacctggt gggcctccgc ctcggctacg gtttcggagc tggaaggaaa cttcaatgcg
     5881 gtgaccgggc cggatgatta caccaacggt ggtgcggggc cgtgggtccg gcccaacgag
     5941 cagctcaatt tcttcgggcc gctcaacaat cagagccggt tcgagctcaa ggcccagctg
     6001 ggcgggattc tcccgtgggg attccggggc ggtgccttcc tgagcttctt tcagggcgac
     6061 cgagtgacac ccaccctgac gatcaacccg ctgctgctgg agatggcaat ccaggaagag
     6121 ggcaagccgt tgccgacccg cttccggtac ttcttcctgt tcaatcaggc gggccaccgg
     6181 atcttcgtgc agccgcgcgg cagctttgcg tacccctcgc ggaccgccct ggacctgcac
     6241 ctggagcgga gcttcccggc cggccgttcc gagtttctgg tcaccgccga tgccttcaac
     6301 gtgttcgggg ccgatgcggt gagctcgatc cagacctcgg tgaacgggtt gttcgacgcc
     6361 ttcacggcct caccggagtt cggcaaagtc cgggggcgga tggcaccgcg gacgctgcgg
     6421 tttggcgcgg cgtatcgctt ctaacgttcc aaagttccgg gttccaggtg ccgggtgcgg
     6481 tgcggggtgc ggtgcttggt tccaggtact tggtgtactg cggtatcgct gtctccatca
     6541 ccgcacttca gattcggcgc acggcacagc actgagcacc gcacctggaa cccggaaccc
     6601 cggaacccag aacggttagg caatgccaat tacactcgaa tccgtgaaca taggtcaacc
     6661 ccgaacggtg ggaagcgagg acgccaccga tcccttcgac cgtcccttca ccagcgccat
     6721 ctggaaggag ccggtccagg ggccgatctg gctggatgcg accggattgc acggtgaccg
     6781 ggtggccgac accaagcacc acggaggacc ttatcgtgcg gcgctgatgt acagcgggga
     6841 tcactatcct cgctggcgga gcgaatggaa ccgaaaggac atcgggccgg gcgggttcgg
     6901 cgagaacctc acggtgcgag gagtggtgga ggcgaccgtc tgcctgggtg acgtgttcga
     6961 ggtgggtgaa gccctggtgg cggtgacgtc tccccggacc ccgtgtcaca tcctggccag
     7021 gcgacacgga aggcgggatc tggtggaaac ggtgcgcgcc aaccaccggc acggctggta
     7081 tctccgggtg ctgcggccgg gctggatcga ggcgggccag ccggtcgcac tgcgagaacg
     7141 gccctatccc caatggccga tcgaccgggt ggcggaggtg aaatggaacc ggaagcagtg
     7201 tcccgaagag gccgcgctgc tggcgcagtg cccggccttg atccccaatt ggaaagcagc
     7261 gctacgagag ggaggagggg tgagggtgga gggttgaaca aatgcagagt gcccaatgcc
     7321 caatgcccat ggaagaaggg ttgaggcaga ccctctgcaa tcggcattgg gcactccgca
     7381 ttcttcattc attcccccct tccgcctctc ccctctctcc tgaagctgtt acctcctcct
     7441 ggtccacaag acgaccgttc cgcacgcccc tccggtgcct cccaactggg ccggcgtctc
     7501 ggccggaccc cggtagatct cgatcgcttc cagctgggcg atgctgaact ggttgatgtc
     7561 ggggggctcg cccgcccgcc cgccgccggt cctgggctcg taaatcttga tgccgtcgag
     7621 gtagatctgc atggcgcatc gatcgcggtt gttgatcaga atgatcttgt tcccgcgtcc
     7681 gtagcggagg ctcactcccg agacggttcg gaacaagtcg gccagggtgc ggtgctccgc
     7741 ctggcgcagg accttggcgt cgatgaaatg gcccagaccg gcccggcgcc gctcctcgaa
     7801 ggcttccatg cccggcggga ttgcgctgac cgtgacttcc agcggcgcca gctcgacggc
     7861 ggcagcggtg agcttcaccg tggtctccag ggtgtcgtcg gccaccagga tggcccggag
     7921 ctggaccggc cgaaacccga tccgccggac caggacgaag tggatgccac tggtcagatt
     7981 gtcgaaccgg aacgcgccgg cggtgtccgt aacggtgcgg cggtcgaggg cctggatcag
     8041 cagctcgacg ccggcaatcg gcttgctggt agagtcgtcc agcacccgac cggcgatgga
     8101 agactgagcg gccaggccgg ccggaagaag cagcaggccc gccagtagca acgcccgcct
     8161 cgggattcgc cccatgtccg tgccctccaa ttggagcctt cacgcgactg cttccatcct
     8221 gcgggcctga cgaagcgggc ccggaccacg gtttcaaccc gtatgatcgc gatggctgcc
     8281 tcgttttgca cccgcatgcg ctattccggt taccgctcgg cgccgaattg tgccatctct
     8341 atctcgactt tcacttctcg aggcctcaat gggcgactac aagcaactca aggtgtggga
     8401 gaaggcacat caactctgtc tgtcggtcat gcatgagacg gaacggttcc cgaccgacga
     8461 gcgggacggg ttggccgccc aactgcggcg gtcggcgatt tccctggcgt cgagcatcgt
     8521 cgagggcagc gaccgtcaat cagaagggga catgggacgg tttcttcaga tcgcgcgagg
     8581 gtcgctctgg gcggttcact atcagctcct cgtcgcccgc gatctggggt ttctggcggc
     8641 ggagcagtgg agcgagctga gcgctcggtg cgatgagatc ggccggatgc tgcaaggtct
     8701 gctcacccat gttcgtcggc agagtcgaaa aggcaacggc gcccgagaca cccagccggc
     8761 ccgccggaag gcagtgaggg ccggagcata gctccggccc tcgggcggct cgctagcgcg
     8821 acgatcgagg gcgatcagtt cagggacgca aaccagggag ccaggaccag ggagaccacg
     8881 ctcatcagtt tgatcaggat gttcatggcc ggtcccgagg tgtccttgaa cggatcgccc
     8941 acggtgtcgc ccaccacggc ggccttatgg gggtcggagc ccttgccgcc gtattcgccg
     9001 ccttcgatgt acttcttggc gttgtcccag gcgccgccgg cgttggccat gaacagcgcc
     9061 agcatcacgc ccgagagggt cgccccgccc aggagaccgc ccagcgcctg gacccccaac
     9121 gtcgccccga ccagcaccgg cacggccacg gcggtcacgc ccggcaggat catctcccgc
     9181 agcgccgctc gggtcgagat gtccacgcag cgggcgctgt cgggtttggc ggtgccctcc
     9241 atcagaccct tgatctcgcg gaactggcgc cgcacctcct cgaccatccc ggcggcggcc
     9301 cgtcccaccg cggtcatggt gagagcgccg atgacgaagg gcagggtccc gccgatgaag
     9361 aggccgatca ccaccatcgg gttgagcagg tcgagcgaga gcacctggcc ctcgggcgtc
     9421 accgcggtcg cgaaggcgga gaagagcgcc agtgccgtga gcgccgccga gccgatcgcg
     9481 aaccccttgc cgatggcggc ggtcgtgttg cctaacgcat ccagtccatc cgtgatcttg
     9541 cggacgtcct tgccgagatg gctcatctcg gcgatgccgc ccgcgttgtc ggcgatcggg
     9601 ccgtaggcgt ccacggtcat ggtcacgccc acggtggcga gcatgccgac ggcggagatg
     9661 gcgatgccgt agaggtcggc cgcccagaac gagacgtaga tcgccgcgca gatcaacagg
     9721 agcgggagca gcacgctcat catgccgacc gccagtccgg cgatgatgtt ggtggcgggt
     9781 cccgtgagcg aggccttggc gatatcgcgg atcggcttgc cggcggtgaa gtactcggtc
     9841 accagcccga tggcgatgcc ggccacggtg ccggccacga cggcccagaa cggccccatg
     9901 gccggccggg cggccatccc gagcgggaac gccgccgtca ggaaccacgc cgcgagaatg
     9961 aacagcccgg ccgcgatgaa ggtggtcagc cggagggcac ctgcgggcga gcctttttcc
    10021 agcagcttca tggcgccgat cccgaccacc gagcagccca gcccggccag caccatcagg
    10081 attggcaaga gcaccgcgtt ggcgcgcatg gcgtcctgaa tcgccggcga ggtggcggcc
    10141 agcgcgatgg tagcgatgac ggccccgaca tagctctcga agatgtccgc ccccatgccg
    10201 gcgacatcac ccacgttgtc gccgacgttg tccgcgatgg tggctggatt gcgggggtca
    10261 tcctcaggaa tgccggcttc gaccttgccc accaggtcgg cgccgacgtc ggccgctttg
    10321 gtaaagatgc cgccgcccac ccgggcgaag agggcgatgg acgaggcgcc catggcgtag
    10381 ccggagatga tctcggagaa ggccttgtag gtctggaaat cgagggcgcc ggccgggagc
    10441 accaggtagg tcaccgtccc gatgccgatc aatccgagcg aggccaccgc cagacccatg
    10501 actgcgccgc cgttgaaggc gatccgcagg gctttgccct ggccgctgct gcgggccgct
    10561 tcggcggtcc ggacgttggc cttggtggcg gccttcatgc cgaacaatcc ggccgcgatg
    10621 gagcagagtc ccccgaagac gtaggcgaca ccggtgcggg tgcccaccgc gaggctgagc
    10681 agggcggcca cgatcaggag gaaaggcaac aggatggtgt attcccgccg caggaaggcc
    10741 atcgcgcccg actcgatcag cccggcaatg tcccgcatga catccgaccc gtcgggctgg
    10801 cgccggatgt actggtacac caggaaagcg acgaccaggc cgcccaggcc gccgagcgct
    10861 gcgtagagcg cgtactgggt cacgggttct ccctccgatt gaatcgattc atggcgggtt
    10921 caatcccctc ggccaaccag cactcgacgg cttcggacat cgggtccagg agctgagtga
    10981 ccgcggtgcg ctcatccgag ggcatgatgt cgagcacgta gtccgccagg tcgtcgccgg
    11041 tttcgggcat cgggccgaca ccgatgcgca gccgggcgta ttctcgacct cccaacgcgg
    11101 cctcgatgct cttgagtccg ttgtgaccgc cggcggagcc catggcccgc agccggaagc
    11161 ggcccaccgg cagggcggcc tcgtcgacca gcaccagcag ctcggtggcc ggatcgaatt
    11221 cgcccgacgc gtgaagcggg gcgagtaccg ccccgctccg gttcatgtac gtcaacggtt
    11281 tgaccagccg gaccgtccgg ccctcccgct cgccgatgac gatgcggtag aaccgttccc
    11341 gcctccacgc gccaaggccc caccgcgccg ccagatgatc ggccagccac cacccggcat
    11401 tgtggcgggt ctcggcgtac tccggaccgg gattgccgag acccagaatg gtccgcagga
    11461 gttactcctc ggcgggggct tcctcttccg ccttgggctt ccggatgagt tcgggttcgg
    11521 ccacctcagc gaccggcgcc gggacctcaa ccgtttcggt ccgcggcggc acgaccgtgc
    11581 agatcggctg attggggtcg ttcatgactt ccgcattggc caccgtcaca tcccggacga
    11641 acacctggtg cccgatggtg agggtagtca cgtcgacctc gatgtgctcc gggatgtccc
    11701 gcgggaagac ccggatctcg agcttatgga gcaggtgatc gagcacgccg ccgctgttgc
    11761 ggacgccgtc cggcactccg accaggtgga ccgggacttc gaccacgatc ttctcgtcgg
    11821 cgctgatctc gtacaggtcg aggtgcagca ggtcggaggg acggaccggg ttgcgctgca
    11881 cttcacgaat caggaccttg accggttcac gcccggccac gctcacctcg atgatcgcgg
    11941 cggcggcgcc gatggtctgg atcaggcggg cagcttcaac gacgtccacc gcgagattct
    12001 cgggcgtccg gttgtggccg tagatgatgg ccgggatccg gccggcgcgc cggagcgcac
    12061 gggccgcgcc cttgccagtg gtggagcggg gctccgccgt gagtgtcgcc tgggtggcca
    12121 tatcagtctt ccttcctatt cgaacagcga gctgaccgag agatcgctgt gggtatatcc
    12181 gatggccttg gccaggagcg gcgcgatcga gagcaccttc agcttctcga ttttccgctc
    12241 cggcggcagg gcgatcgtat tggtgaccgc gatttcctca accggggcct gcgacagccg
    12301 ctcgcaggcc gggccggaca acaaagcatg ggtagcgcag atgtagatct tgccggcgcc
    12361 gagccgcttg agggcgtaca cggcttcggt catggtcccg ccggtgtcga tcatgtcgtc
    12421 cgggatcatg cagtcccggc cttcgacctc acccaccacg ttcaccgcct ccgcgacgtt
    12481 ggccgcggtg cggcgcttgt cgatgatggc cagggaggca ttgagacgct tggcgaaccc
    12541 gcgcgccatc ttggcgccgc ccacatcgga tgccaccacc accagttcgg tgaactgctt
    12601 ctgccggtag tgactcacga acaccggcgc cgcgtacaga tggtcgacgg gcaggtcgaa
    12661 aaacccctgc agctgatgct ggtgaaagtc gatcgccagc acccgatcgg cgcccgcctg
    12721 ggagaccaga ttggccatca gcttggcgct gatggccact cggggttgat ccttgcggtc
    12781 ctggcgggca tacccgaagt agggaatgac cgcggtgatc cgggccgcgc tggcccgctt
    12841 ggccgcatcc atcagcagca acagctcgag gatgttctca gccggcggat tggtcggctg
    12901 cacgatgaag acgtcacggc cgcggacgtt ctcgtcgatc ttgacgaaga tttccccgtc
    12961 agcgaatcgg cggaccgtca cctggcataa ctgggtttcc aggtgctgcg ccagttcctc
    13021 ggcgagcagc cgattggccg acccgctcat cacaagaaat ggcgcgcgcg agagcgcggt
    13081 agccttcatt tccacagccc ccaaaggtaa gcggtcatga gggttctggt caaccaattc
    13141 gaaggctacg ccgtcggctg gtcgaggcgg ggcaaagcta acggtagctg atggttagcg
    13201 ggagggatat ggcacgccgc gttcccggtt cctggtgcca ggtacctggt gcggtgctgg
    13261 gtgccgagtg cggcgccagg tcccatccgc caggcgcgcc gcggcatccg ggtctcggtg
    13321 aaccgactcg gcaccgcacc cggtcccgtg gcactcggaa ctagggacgg ggttgtgaag
    13381 cggggaaggg agattgcccc tggtggactc gaaccaccat tcccggatcc aaagtccggt
    13441 gtcctgccat tggacgaagg ggcagaacga cgtaagagtg cccagtgccc aatgccgatc
    13501 gcagatgggt cggcatgagc aaagttacca atctagcggg tctcggtagt gctcacgcgg
    13561 ccgaaccgtt tgcccagcat catcgccgcg tcgtcccggt cgcggacatt gcggtagatc
    13621 ccgaagaccg tggacccgga gccgctcatg cggcagatca gagggtgggt cccggcgacg
    13681 gcctcgaacg cagcgcgcac ctcgggatgg cgaccaaaga ccggcgcctc gaagtcgttt
    13741 ccgctcattc ggccgatgct gccccaggtg ctcagcgcgg cgagatcgag ggcgatgctc
    13801 ccgcggcggc cggccgcttc gcgggcctgg tccacccagg cataggccaa agcggtgcga
    13861 accggcacgg gcggggagag cagcagcacc ggggccgggg ccggcggcgg caccacgaag
    13921 agccgttccc cccgtcccca ccccagcgcc agcgacgccc cggaaaaaca gaacgccaca
    13981 tcggatccca gccgggccgc gagctggaac agctcgtgtc ggggcaccgc gtggccgccc
    14041 agtgcgttga ccgcctgcag ggcggccgcc gcatcggcgg agccgccgcc gagtccggcc
    14101 cccaccggaa tgcgcttcac caggtggagc tggacgccga aggagggacg gagcgccgcg
    14161 agcaccagct cggcggcccg gaccgcgagg ttctcccgct cgggtcccag gtcgggccct
    14221 tccacggtga gggacactcc ggcggccggg cgcgcctccg ccaccaactg atcggccagc
    14281 ccgatccgca ggaacaaggt ctcgatgctg tggtacccgt cgacctcccg tcccagcacc
    14341 cgcaggaaca ggttgagctt ggccggagcc tcgaccgtga ccggagcggt cacgcggggc
    14401 ggttccccag ttcctgggtc cgtccccgat tgagctcgcc ccagccgatg gtacgggtgg
    14461 tcgaccacaa tcccagcagg gtaatgggaa ggaaggtcgc cgcgtggtag gtcagggcgt
    14521 aggccagggc ccggtcgccg gggatgccgt agagcgccag tgcggtcacg atgccggcct
    14581 cgaaggtgcc gacgaagccg ggggtggagg gcgcggcgat caggaagacg atcatgctct
    14641 gcaccaggat cgcgccggcg aagcccaggt cgatgccgaa gccgggaaac agggcctgaa
    14701 agctgacggc gttcacacac cacaccgcca cacaccaggc gcctaacagc agcaaccggg
    14761 ccggtgaacg aagggcggcc aggccgtccc gcacgccgta caacaacccc accaggcgtc
    14821 gggagagcgc cggccacggt accagccgtt cgaggagccg ggccgcggga tcgggccggg
    14881 ccagcaccag cgccgcggcc aggagcgcca ccgccgcgag aattccgatc cggcgggcca
    14941 gcgccgggac cgacaattcg ccgaagcgga tgttctcggg cagatcggcg gtgagcaggg
    15001 ccacgaccag catcgcgacg accgtcagcg cgtcgaacac ccgctccacc gccaccgaag
    15061 cgaacgccgt gctcatccgg accggtgcca gccgggaggc ggcgaaggcg cgcagcagct
    15121 cgccggcgcg gagcggcagg aggttgttcg ccatgtagcc gatggcgagc gcgtgccagg
    15181 ccgggcccag cgggagcgga gtgccgtcgt ggagccggag caggatgcgc caacggagtg
    15241 ccctgagcgg gaaggtcagg gtcgcgagga atacggccag caggagcggg ccgggcggcg
    15301 cgctgcggat atgggtccac acgtcggcca ggcgcaggcc ccgcatggcc caccagagga
    15361 ggaccgcgga cagcgccagt cccagcagga tggcgagggt atggcgcccg cggccccggc
    15421 cggcgtcagt cgccgtcggc aagcgcgagc gggacgaggt ccaggagttc gcgcaccagc
    15481 ggctcgaccc gatccagttc gtccgatgcg gtgcggagcg agccttccag cagctgccga
    15541 acctggtccg cccgctccaa cgcggcccgg ccggaataga gcaggctctc aatcggcacc
    15601 acgccggtgg ggctctcctc cggggccagc agctcgatcg gaaccggctc gggctcgggc
    15661 gcgagcagct cgatgggaac cggctcctcg tcgggcgcga gcagctcgat ggctaccggc
    15721 tccagctcta tttcctcgaa ctcgatcggt tcgagtggcg gtggagggac cggaagcggc
    15781 ggctccgcga cgggtgccac gagcgccggc gagaggggcg ggaccggggc gtcctcgcgc
    15841 accatgcggc tgtactgtga aaggctccgc tccaggcgag tccgatcaat ggggatgtcg
    15901 agggcgggtc gctccggagc cggcgccagg tcggcgatct cgaccaccgt ttcgacctcg
    15961 agcaactgct cgatcggtac cggctcgggt tcaccgctca attcatcgag tctcgcctcc
    16021 agcgcctcca gatctccccg ggctccttcg gccagcgcct gtcccgccgc atccagcgcc
    16081 ggtgccagcg aggtgaggtc gccgttagcg gcagcgtcgg tgagcgattc caccaggcgg
    16141 gcaaccagac ggcccgccgg acggcggccc aatccgccgg gagcgtcgcg cagaacggcc
    16201 agcaggacca gcgcctgcaa ccgggcggcg gcccggccag gggcgtcgcg cagctgatcg
    16261 gcgccggccc ggagccgttc gccgagcgag gcgaggtcga ccggctccgc gaagcgctgc
    16321 tcgggccgct gcagcaccgg cgcgcccccg tccagggtgt cgatcgacac caccacttcg
    16381 ctccccgcca gggttcgcaa caactggtcg gcgaagcgat gggcttcacc cagctccgga
    16441 tcggggtgac ctcgctcggc cacctcgcgc gcgacccggc cgaatgcgtc ggcagcggtc
    16501 gcgcagagtt cggccgcgcc cgggggcaga gccgggtagc gctgcagctc gcgcaccgct
    16561 gtgtcggtgg cgtcgagcag atcggggagg ggggccagct ccgccaagcc ggccagtccc
    16621 cgcagagact gcatcgagtg ggtgatgcgg accagccgtt cggccggcgg cg
//
LOCUS       DASWKS010000045         4934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2240171, whole genome shotgun sequence.
ACCESSION   DASWKS010000045 DASWKS010000000
VERSION     DASWKS010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4934
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240171"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VGA78_01620"
     CDS             <1..705
                     /locus_tag="VGA78_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892584.1"
                     /translation="TSADASGANTDCNAGFFALGSMAAGCANQAAGTLANQGGFAGGS
                     GWSGAAGSDPAPFMFSGGYGYNLRLVGSLAGKLSEFGIFTRVPDGAGGFIYAFTSIPT
                     FGAKSINSQFQVANGSDWGFFIRNSFNPATGGCVGPNTDCSDATGGFTSASFQQFALF
                     QGGLNQWGSPNYLVGAEDNQLSVLPNGGFFDSDYNDYLVEVTVTPEPLSMALLATGLV
                     GLAGAGIIQRRRRART"
     gene            complement(860..1852)
                     /locus_tag="VGA78_01625"
     CDS             complement(860..1852)
                     /locus_tag="VGA78_01625"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9892585.1"
                     /translation="MARINLIGWRNQAGLSRDLALLQDVLTGAGHEVRVNGLTPPRRL
                     KRLWLRLRSGGPPWDLAIFVEKVVPSWMELARHNVLIPNPEWLEETPGLRRVDAVWTK
                     TRFASEALGNLGLPLREIGFSTLDRGHLAPERDGTRQWHCALHVAGRNRTKGTAPILD
                     IWRRHPEWPSLTVVAAWSEPQSRPADLPPNIQLVDHFLDDTRLAALQRQCGLHLCPSE
                     VEGFGHTLVEGMSVGAVVLTTDAAPMSEIVAPTRGFLVPAQSLEPMRRGHRARVEPAL
                     LEEAVAQVLGLPESRLQEIGREGRDWFEANDRAFRQRLVSAVEALLLPDARASH"
     gene            complement(1869..2525)
                     /locus_tag="VGA78_01630"
     CDS             complement(1869..2525)
                     /locus_tag="VGA78_01630"
                     /inference="COORDINATES: protein motif:HMM:NF023410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EpsI family protein"
                     /protein_id="HEX9892586.1"
                     /translation="MPNSVMRLVPVGILGVGCALLLKIGGQSKTGLVGTLDGIPPEIA
                     GYRGRDQRVNEEEQRVAGMDSYLLRIYQRDSTDGFSLYVGYYEAQTQGKTIHSPKNCL
                     PGAGWEPVESRPLTVALPTGEMTVNRYLLEKGSSRAIVYYWYQGRGRVSWNEFAVKWE
                     LLRDKALHGRSEEALVRIVVPLRPDAVASADSVASAAAREIVPALFGILAPLSPSRES
                     "
     gene            complement(2518..3411)
                     /locus_tag="VGA78_01635"
     CDS             complement(2518..3411)
                     /locus_tag="VGA78_01635"
                     /inference="COORDINATES: protein motif:HMM:NF021254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase/archaeosortase family protein"
                     /protein_id="HEX9892587.1"
                     /translation="MTLPATTLPGDRTGRLDLATQLPLWLALAAFVLLFAKPAGLLLR
                     DWWSDPEAGHGLLLGPAAAWLVWKRGLLPERTRNVGLGFALLLGAVLLRLASELAAEL
                     FIMRFSMVMAAGGMVVYYLGLRQALAWWLPFTLLVLAIPLPELIRSTLALPLQFKASQ
                     LGATLLEWRNVPVRLAGNIIQLPGHRLFVTEACSGLRSLTALLSLALLMGGIWLRWPV
                     LRAALLLSAVPIAVAINGVRVFLTGFLVYYVDPALGQGFMHLTEGWLLFVVSFGLVGV
                     AAYGMTWIDRWRGRRQEVANA"
     gene            complement(3421..4179)
                     /locus_tag="VGA78_01640"
     CDS             complement(3421..4179)
                     /locus_tag="VGA78_01640"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX9892588.1"
                     /translation="MEPPSSIAASTSTPASAGRAAEADRGRTGAVYAVHPGRAGLAGP
                     RRILNVLMALLLLVLTAPIWLVIALAIKLSSRGPVLYRQTRVGLDQRRSGIRPNDPRR
                     RSDVGGKPFTIYKFRTMRLDAEDGTGAVWACHDDPRITMVGRILRQYRLDELPQLLNV
                     LRGEMNLVGPRPERPSIVTELRKEIPYYQQRHRTLPGITGHAQVNLQYDASLEDVRKK
                     VDHDLEYLRKASAWEDFKIMVKTIPVMLFRRGSR"
     gene            complement(4198..>4934)
                     /locus_tag="VGA78_01645"
     CDS             complement(4198..>4934)
                     /locus_tag="VGA78_01645"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX9892589.1"
                     /translation="ATAQTPPVTEARLDTRRAQASRRELEASLAQIDTILKSPGYSSR
                     IREAKRREAALIRDRLTEGDLQVGDQIALSVLNEEAFTGTFLILAGRVLALPGLPGIP
                     LRGVLRSEAEQYLTEQLGKYVRNPSVKVTTSIRLAVLGSVSKQGFYQVPADVLISDAI
                     MVAGGPIGEANPNKSRILRSENEILSREEVAQAIVQGATLDQLNLRAGDQIFVDEDAR
                     KPGSFRTVLAVVGAVTSVAFLATRLF"
BASE COUNT          822 a         1696 c         1626 g          790 t
ORIGIN      
        1 acgtccgccg acgcgagcgg cgccaatacc gactgcaacg cgggcttctt cgccctcggc
       61 agcatggctg cgggatgcgc caatcaggcg gcaggcaccc tggccaacca gggtggcttc
      121 gccggtggca gcggctggtc cggggcggcc ggttcagacc cggcgccgtt catgttctcc
      181 ggcgggtacg ggtacaacct ccgactggtc gggtcgctgg ccggcaagct gagtgagttc
      241 gggatcttca cccgcgtgcc ggacggcgcg ggtggcttca tctacgcttt caccagcatt
      301 ccgacgttcg gggccaagag catcaactcg cagttccaag tggccaacgg cagcgactgg
      361 ggcttcttca tcaggaacag cttcaacccc gcgaccggcg gctgcgtggg tcccaatacc
      421 gactgctccg atgccaccgg cggtttcacc agcgcgtcgt tccagcagtt tgcgctgttc
      481 cagggcgggc tcaatcagtg gggcagcccc aactacctgg tcggtgccga ggataaccag
      541 ctttcggtgc tgcctaacgg tggtttcttc gactccgact acaacgacta cctggtcgaa
      601 gtcaccgtca ccccggaacc gctgtccatg gcgctgctcg ccacggggct ggtcggcttg
      661 gcgggcgccg gcatcattca gcgccgccgc cgcgcccgga cctgagcttt cccatccgcc
      721 agcgtgccgc cgccccgcga gtttcggggc ggcttgcatt ttggccggca cgcggcacta
      781 atcctgcctc agtccattga tacagttcgc cccgggagcc cgctcgccag cgccgtggcg
      841 ttgagcctgg gtctcgcgct cagtggctgg ctcgagcgtc gggcagcagc aacgcttcga
      901 ccgccgacac caaccgttgc ctgaaggctc gatcattggc ctcaaaccag tcccgaccct
      961 cccgcccgat ttcctgaagc cgtgactccg gcagcccgag gacctgggcg accgcctcct
     1021 ccagcagcgc cggctctact cgagcccggt gcccccgccg catcggttca agactctggg
     1081 ccgggaccag gaagccccgg gtcggggcca cgatctcgct catgggggcc gcgtcggtgg
     1141 tcaacaccac cgctcccacg ctcatgcctt ccaccagcgt gtgcccgaag ccttccacct
     1201 cggaggggca caggtgcaag ccgcattggc gctgcagcgc ggccagtcgg gtgtcatcca
     1261 ggaaatgatc gaccagctgg atgttcgggg ggagatcggc cggccgcgac tgtggctcgc
     1321 tccaggcggc caccaccgtc aagctgggcc actccggatg gcgccgccag atatcgagga
     1381 ttggggccgt gcccttggtc cggttccggc ccgccacgtg aagcgcgcag tgccactgcc
     1441 gtgtcccgtc ccgttccggt gccaggtgcc cccggtcgag ggtgctgaat ccgatctccc
     1501 gcaggggcaa gccgaggttg ccgagggcct ccgaggcgaa ccgcgtcttg gtccagaccg
     1561 catccactcg ccgcagccca ggtgtctcct ccagccattc cgggttggga atcagcacgt
     1621 tgtggcgggc cagctccatc caggacggca ccactttctc gacgaagatg gcgaggtccc
     1681 agggaggtcc tccggatcgg agccggagcc acaagcgctt gagccggcgc ggtggtgtga
     1741 ggccgttgac ccgcacctcg tgtcccgcgc cggtcaggac gtcctgcagc agcgcgaggt
     1801 cacgcgagag tccggcctgg tttctccaac cgatcagatt gatgcgagcc acgagtgccg
     1861 gtggtgggtc aggactcgcg cgaaggcgac agcggagcga ggatgccgaa gagggccgga
     1921 acgatctccc gcgcggcggc cgacgccacc gaatcggccg acgcaaccgc gtcgggccgc
     1981 aacggcacca cgattcggac cagggcctcc tcactgcggc cgtgcagcgc cttgtcgcgg
     2041 agcaattccc attttaccgc aaactcgttc caggacaccc ggccgcggcc ctggtaccag
     2101 taatacacga tggcgcggct ggagcctttc tcgagcagat agcggttgac cgtcatctcg
     2161 ccggtcggga gcgccaccgt gagcggccgg ctttccaccg gctcccagcc ggcccccggc
     2221 aggcagttct tgggggagtg aatggtcttc ccctgggtct gcgcctcgta atagccgacg
     2281 tacagggaaa agccgtcggt cgagtcgcgc tgatagatgc gcagcaggta gctgtccatc
     2341 cccgcgaccc gttgttcttc ctcgttgacg cgttggtcgc gtccccggta cccggcgatt
     2401 tccgggggga tgccgtccag agtgccgacc agtccggtct tcgactgacc cccgatcttg
     2461 agcagcaagg cacagccgac gcccaggatg cccaccggga ccaatcgcat cacgctgtta
     2521 ggcattcgcc acctcctgcc gccgcccccg ccaccggtcg atccaggtca tgccatacgc
     2581 cgccaccccg accaggccga acgaaaccac gaagagcagc cagccttcgg tcaggtgcat
     2641 gaatccctgt cccagcgccg ggtccacgta atacaccagg aagccggtga ggaagacccg
     2701 gacgccgttg atcgccacgg cgatcgggac ggcgctcagg agcagagccg cgcgcagcac
     2761 cggccaccgt aaccagatcc cgcccatcag gagcgccagg ctgagcaggg cggtgagcga
     2821 gcgcagtccg ctgcacgcct cggtcacgaa cagccggtgc cccggcagct ggatgatgtt
     2881 ccccgccaac cggaccggga cattgcgcca ctccagcagg gtcgcgccca gctgggaggc
     2941 cttgaattgg agggggaggg ccagggtgct gcggatcagc tcgggaaggg ggatcgccag
     3001 caccagcagg gtgaagggca gccaccaggc cagcgcctgc cggaggccca ggtaatacac
     3061 caccatcccg cccgcggcca tgaccatcga gaatcgcatg atgaacagct ccgccgccag
     3121 ctccgacgcc aggcggagga gcaccgcccc caggaggagc gcgaatccca atcccacgtt
     3181 gcgggtgcgc tcgggtagca acccgcgctt ccacaccagc cacgccgccg ccggacccag
     3241 cagcaatccg tggcccgcct ccgggtcgct ccaccaatcc cgcagcagca gcccggccgg
     3301 cttggcgaag agcaggacaa aggcggccag cgccagccag agaggcagtt gcgtggcaag
     3361 gtccaggcgg ccggtacggt cgccggggag ggtagtggcg ggaagggtca cgcctgaaag
     3421 ttatcgggaa ccgcggcgaa acagcatcac cgggatggtc ttcaccatga tcttgaaatc
     3481 ctcccaggcc gatgccttgc gaagatactc cagatcgtgg tcgacctttt tccggacgtc
     3541 ttccagcgag gcgtcgtact gcaggttgac ctgagcgtga ccggtgatcc ccggcagggt
     3601 acgatggcgc tgctggtagt acgggatttc cttgcgcagt tcggttacaa tgctgggccg
     3661 ctcgggccgc ggtcccacca ggttcatctc gccccgcagc acattgagca actggggcag
     3721 ctcgtccagc cggtactgac gcaggatccg tcccaccatc gtgatgcggg ggtcgtcgtg
     3781 gcaggcccac actgcgccgg tgccgtcttc ggcgtccagc cgcatggtgc ggaatttgta
     3841 gatcgtgaag ggcttgccgc ccacgtcgga gcgccggcgc ggatcgttgg ggcggatgcc
     3901 gctgcggcgc tggtccaggc cgacccgggt ctgacggtag agcaccggac cacgggagct
     3961 gagtttgatg gcgagagcga tcaccagcca gatgggcgcg gtcagcacca gcagcagcaa
     4021 cgccatcagg acattcagga tccgccgcgg accggccagc cccgcgcgcc ccgggtgcac
     4081 cgcgtagaca gctccggtcc gtccccggtc cgcctcagcc gcccggccgg cggaggccgg
     4141 agtactggtg gaggcggcga tggaagaggg gggttccatg gctgaatggc ccaacgctca
     4201 gaagagccgg gtggcgagaa aggccaccga ggtcaccgcc ccaaccaccg cgaggaccgt
     4261 ccgaaaactg ccgggcttgc gggcgtcctc gtcgacgaaa atctggtccc ctgctctcag
     4321 gttgagctga tccaacgttg cgccctggac gatcgcctgg gccacttcct ctcgactcag
     4381 gatctcgttt tccgagcgga ggatccggct cttgttggga ttggcttctc cgatcgggcc
     4441 tccggccacc atgatcgcgt ccgaaatcag aacgtcggcc ggcacctggt agaagccctg
     4501 cttgctcacc gaacccagca ccgccaggcg aatggacgtg gtcaccttga ccgaagggtt
     4561 tctgacgtac ttgcctaact gctcggtcag gtattgctcg gcttcggaac gcagcactcc
     4621 gcggagcggg atgccgggca acccgggaag ggcgagcact cgcccggcca ggatcaggaa
     4681 ggtaccggtg aaggcctctt cgttgaggac cgacaaggcg atctgatctc ccacttgcag
     4741 gtcgccttcg gtgagtcggt ctcgaatgag ggccgcctcc cgccgcttgg cctcccggat
     4801 ccgggagctg taccccggag atttgaggat ggtgtcgatc tgcgcgaggc tggcttccag
     4861 ttcccgccgc gacgcctggg cccgacgggt atccaaacgg gcttctgtca ctggcggggt
     4921 ctgcgctgtg gcgg
//
LOCUS       DASWKS010000046         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2981772, whole genome shotgun sequence.
ACCESSION   DASWKS010000046 DASWKS010000000
VERSION     DASWKS010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2981772"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..1675
                     /locus_tag="VGA78_01650"
     CDS             326..1675
                     /locus_tag="VGA78_01650"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9892590.1"
                     /translation="MKPEPDVEAGFRRELGLVDASVLVAGAVIGVGIFANPANVARIL
                     GQPSLILLAWVLGGGLALLGGFAYAELGSRLPRVGGQYSYLASAYHPLVGFLYGVALL
                     FIINGGALAAVAILFASYVDRGFVPLGPWGIRLVAALVLILLTLVNGLGIRAGKWTNN
                     LLMAAKVGGIVGLIGLALGGGRAPVSDFASLTVPPGREVVPLLLTALVPIMFAYGGWQ
                     NCASVAAEIKDPARTLPRANVLGVAVVVALYLGLNVAYLWVLTPEQMGASTALAADMA
                     RAVAGETGARLVAALILISSLGFLSVIILTGPRLYYAMAADGLFLKRAARLHPRHRTP
                     TFTLWFQTAVSVILLATNTFDQLLSYVVFADWLFFGLTVGGLFVLRRRNPGREGVASM
                     PGHPVTTLIFVLAAAGIVLNSFVAYTAQSLAGTAILAVAAAGYLLLFRARAPARDVP"
     gene            1662..>2670
                     /locus_tag="VGA78_01655"
     CDS             1662..>2670
                     /locus_tag="VGA78_01655"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9892591.1"
                     /translation="MTFPEFVYMGWAKSRPSARINLARSGIEPCPVSLLGTRGKAIEI
                     QHPAGYGWLPLRRAIARRYRVLPDQVYPISGGASMANWLACSSAIDGERGVEAIVERP
                     TYEQLLRLPQALGCRVRRLDRRFQEGYAIDLDRFEALVTRRTRVALVSNLHNPSGARI
                     DLPALGRMAAILRRVGAWLVVDEVYLECLFRAGTESAVLAGPNVIATNSLTKAYGLDG
                     LRAGWILGPEEIIARVRRINDLMCVNGVAPGEQLALQALRKLKAIRQRADRLLDSGLE
                     LITDFLIREQRLEAVLPPGGNVIFPRLAPAFNSEALADHLQHRYSTLVVPGKFFESPR
                     HV"
BASE COUNT          368 a          896 c          873 g          533 t
ORIGIN      
        1 tccagccacc gtgatgcctt cgggttccag cacgtcccgg acgacttcca gctgatccgg
       61 gtcatcgtct acgagcaaca atcgtaggga aactgggagc gccatggggc atccctcctt
      121 gtgatcgtct agcatcccca ccgcatattt acggacgcca accgatccga attggagcac
      181 attgggcaac ggctcggtcg cacgatcatg cgaggccgca agatgaatgc cggatagtgc
      241 tccccagtgg tgcgtcggct agtcgcggga tacgttgttt cgcaatgctc aatcctggca
      301 tgtctaccac ctgtcccgtc gctctttgaa gccggagccg gacgtcgagg ctgggttccg
      361 ccgggagttg gggctggtcg atgcctcggt tctggtggca ggtgccgtca ttggcgtcgg
      421 tatcttcgcc aatcccgcca acgtggcccg gattctgggc cagccctccc tgattctcct
      481 ggcatgggtt ctgggcgggg ggttggcgct gctgggcggg ttcgcttacg ccgagctggg
      541 gtcccggctc ccccgggtgg gggggcagta cagctatctc gccagtgcct accaccccct
      601 ggtgggtttc ctctacggtg ttgcgttgct gttcatcatc aacggcgggg ccctggccgc
      661 ggtcgccatt ctgttcgcca gctacgtcga tcgcgggttc gtccccctcg ggccgtgggg
      721 catccgcctg gtggcggcgc tggtgcttat cctgctgacc ctggtcaacg ggctgggaat
      781 ccgagccggt aaatggacta acaacctgct gatggcggcc aaggtgggcg gcattgtggg
      841 cctcatcggg cttgccctcg gcggcggccg ggcgcctgtc agcgactttg cctccctcac
      901 cgtaccgccg gggcgtgagg tcgttcctct gctcctgacc gcgctggttc ccatcatgtt
      961 cgcttacggc ggctggcaga actgcgcgtc ggtagcggcc gagatcaagg accccgcccg
     1021 aaccctcccg cgagccaacg tgctgggtgt ggcggtggtc gtggcgctct acctcggtct
     1081 caatgtcgcc tacctgtggg tcctgactcc ggagcagatg ggagcgtcca ctgccctggc
     1141 cgccgacatg gcgcgcgccg tggccggaga aacgggagcc aggctggtcg ccgccctgat
     1201 cctgatctcc agcctgggat ttctgtccgt catcatcctg actggtcccc ggctgtacta
     1261 cgccatggcg gccgatggcc tgtttctcaa gcgagcggcc cggctccatc cccggcaccg
     1321 caccccgacg ttcactctgt ggttccagac cgcggtctcg gtgatcctgc tcgccaccaa
     1381 cacgttcgac cagctcttgt cctatgtcgt gttcgccgac tggctcttct tcgggttgac
     1441 cgtgggcggg ctgttcgtgc tgcgacggcg gaatcccggg cgagaggggg tcgcgtccat
     1501 gcccgggcat ccggtcacga ccctgatctt cgttctggcc gccgccggga tcgtgctcaa
     1561 cagcttcgtg gcctacaccg cccagtccct ggccggcacc gcgatcctgg cggtcgcggc
     1621 cgccgggtat ttgctgctct tccgtgcccg agcgccggcc cgtgacgttc cctgagttcg
     1681 tctatatggg ttgggccaag tcgaggccca gcgcccgcat caacctggcg cgcagcggca
     1741 tcgagccctg tcctgtgtca ctgctcggca cgcgagggaa ggccatcgag atccagcatc
     1801 cggccggtta cggctggttg cccctccgtc gggccatcgc gcgccgttat cgggtcctcc
     1861 ccgaccaggt ctatcccatc tccggcggcg ccagcatggc caattggctc gcctgcagct
     1921 ccgcgattga tggcgaacgc ggagtcgagg caatcgtcga gcggccgacg tacgaacaac
     1981 tgctgcgcct gccccaggcg cttggctgcc gggtgcggcg gctcgaccgt cggttccagg
     2041 aaggctatgc catcgacctg gaccggttcg aggcgctggt cacgcggcgg accagggtcg
     2101 cgctcgtcag taatctccat aacccctctg gcgcccggat cgaccttccc gcgctcggcc
     2161 ggatggcggc gatcctccgg cgggtgggcg cgtggctggt ggtggatgag gtgtatctcg
     2221 agtgcctctt tcgggccggc accgaatcgg cggtgctcgc ggggcctaac gtgattgcca
     2281 ccaacagcct gaccaaggcc tatggcctcg atgggttgcg ggccggatgg attctgggac
     2341 ctgaggaaat catcgcgcgg gtgcggcgca tcaacgacct gatgtgcgtc aacggcgtgg
     2401 cgccgggaga acagctggcg ctccaggccc tcaggaagct gaaggccatt cgacagcgag
     2461 ccgatcggct gctcgattcc gggctcgagc tgatcacgga tttcctgatc cgagagcagc
     2521 ggctcgaggc cgtcctgccc ccgggtggca acgtgatctt cccccgtctg gccccggcct
     2581 tcaacagcga agccctggcg gatcatctgc agcaccgata ctccacactg gtggtcccgg
     2641 gaaagttctt cgaatctccc cgtcacgtcc
//
LOCUS       DASWKS010000047         5200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_23205, whole genome shotgun sequence.
ACCESSION   DASWKS010000047 DASWKS010000000
VERSION     DASWKS010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5200
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23205"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1928)
                     /locus_tag="VGA78_01660"
     CDS             complement(30..1928)
                     /locus_tag="VGA78_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HEX9892592.1"
                     /translation="MSVPEHRPGQQQPTGKALAGLALGALGVVFGDIGTSPLYGIKEG
                     FSGPHAIAATPEHILGFLSLVFWSLVFVIAIKYLGFVLRADNNGEGGILALTALVSGI
                     KRDGRVPMVAILLGLFGAALLYGDGVITPAISVLGAMEGLSVVTPALERYVPWVSAVI
                     LAVLFLFQKHGTGNIGKVFGPVILVWFITISLTGVRGILIDPSILRAVNPLYALDFFL
                     RDGLRAFLVLGTVVLVITGGEALYADMGHFGRRPIRVAWFSVAMPALMINYFGQSALV
                     LHDPQAAENPFYRLAPEWALWPLIVIATAAAIVASQALISGAFSLTQQAIQLGYSPRM
                     TIVHTSSSQVGQIYLPEVNKALAVGCIVLTLGFRSTSNLAAAYGIAVTGTMVITTLLF
                     HRVMTEVWNWPAWRAGLVTGVFLVVDLSFFGANIVKIGQGGWVPIAVAGGVFALMSTW
                     KRGRAIVRTALREGSLPLDLFIPDVAKRQLHRVPGTAVFMTSDAAGAPPVLLHHIKHN
                     KVLHQRVVIMSFTTRGVPHVPREERLEVRELGEGFWVVVGHNGFMETPDLSQVREGLA
                     AKGLELKPAETSYYLGRETLLPTGSSKLARWRKKLFIVMSRNAQSATAFFGLPPNRVV
                     ELGAQIQL"
     gene            complement(1925..2356)
                     /locus_tag="VGA78_01665"
     CDS             complement(1925..2356)
                     /locus_tag="VGA78_01665"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HEX9892593.1"
                     /translation="MSFRMGAAVAALAGLFVSAYLWLYKLGQIGTLTCGTGGCETVQL
                     SPYSRFLGVEVAAIGVAGYAVLLGLSLASLSPRQANSIRLINWLVLLSGAALGFTLYL
                     KYLEFFVIKAICRWCVASAVLIAILFGLAVLERRRLGRQPA"
     gene            complement(2353..3027)
                     /locus_tag="VGA78_01670"
     CDS             complement(2353..3027)
                     /locus_tag="VGA78_01670"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX9892594.1"
                     /translation="MADPSPLKRFYALFGLIAAAGIGFLLWQMNRSSTPSIPVPVTVQ
                     PSDTAGFRGYVLGDDSAKVEVIEYADYQCPACQQFATVEWPYVRDRLVRAGKVRWVFR
                     DFPLSQHQWARLAAHAGACGQEQNKFWELQDEIFATQPEWQFSRDAGPTFRTAAQKVG
                     MDVSAYDECMNSLKYAGRIQASANEGVRLGVGSTPTFVIGGRLYPGLIPYDRLRALVD
                     SLSASP"
     gene            complement(3006..3314)
                     /locus_tag="VGA78_01675"
     CDS             complement(3006..3314)
                     /locus_tag="VGA78_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892595.1"
                     /translation="MADHDEVYGEARADQLEDLLRFIAQRIEELDRAGRLLAEAPELL
                     RLLGEARSELFHYEVRSTYDTPETAEHRRLVEEAQQDPDFLTDDDDDEEDEPWRTPPL
                     "
     gene            3462..3734
                     /locus_tag="VGA78_01680"
     CDS             3462..3734
                     /locus_tag="VGA78_01680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892596.1"
                     /translation="MTNSNKKKARVAPASAPSLFDQARDELFSHILRCGVVEADAEQQ
                     KAWMDDTMQYLAERYPDLNEEQLTELRVLGDRFCQPVRRQPAGTVS"
     gene            complement(3843..4280)
                     /locus_tag="VGA78_01685"
     CDS             complement(3843..4280)
                     /locus_tag="VGA78_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892597.1"
                     /translation="MRIICILVTTILAAARALTGQVRHELGMQVTATTGRPAALVAGL
                     AWAWRPGYRDRLVLHSGLGVAEHRLAARSEVVWHFLLQPAAPSGVGVYGGAGLAGQVA
                     RSARGWIVVLVGIESRPGGRSGWMLEAGVGGGVRVGAGYRWRK"
     gene            complement(4311..4727)
                     /locus_tag="VGA78_01690"
     CDS             complement(4311..4727)
                     /locus_tag="VGA78_01690"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX9892598.1"
                     /translation="MADESNIRVIQTAWTGDLRFEGGAIDGPRITIDGDNTSAPGPML
                     TLLLAAAACAGADIVSILKKMQVSLTRCEAKLTGLRAPDHPKRYLNLQFIWTIAGEGL
                     DEAKARRAIDLSIEKYCSVLHSLNPDIPVSYELHLG"
     gene            complement(4796..>5200)
                     /locus_tag="VGA78_01695"
     CDS             complement(4796..>5200)
                     /locus_tag="VGA78_01695"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX9892599.1"
                     /translation="AGTDLLDGPIARRFGSSRFGAFLDPLVDKLFMAAAFGVVLFSGE
                     LRFYEIIAVLARDIVAAVAFLAVTVFRRPLSIPARPGGKAVTVAQTLTITAFLFDSPL
                     LRPLAWATGAIALYAIWDYQRVAKRQARPVGQ"
BASE COUNT          977 a         1768 c         1664 g          791 t
ORIGIN      
        1 ctccccccta ccccctccca cctcttacct cacagttgaa tctgcgcccc caactccacc
       61 acccggttgg gcgggagccc gaagaaggct gtcgcggact gggcgttccg cgacatcacg
      121 atgaacagct tcttgcgcca ccgggccagc tttgacgagc cggtgggcag cagggtttcc
      181 cggcccagat agtaggacgt ctccgccggt ttgagctcga ggcctttggc cgccaaaccc
      241 tcccgaacct ggctcaggtc gggcgtctcc atgaagccgt tgtgtcccac caccacccag
      301 aacccttcac ccagctcccg gacctccagc cgctcctcgc ggggcacgtg gggcaccccc
      361 cgggtggtga acgacatgat gaccacgcgc tgatgcagca ccttgttgtg cttgatgtgg
      421 tgcagcagca ccggcggcgc accggccgcg tcggacgtca tgaacacggc cgtgccaggc
      481 acccggtgaa gttgccgctt ggcgacgtct gggatgaaca ggtccagcgg cagcgagcct
      541 tctcgcaacg ccgtccgcac gattgcccgg cccctcttcc aggtgctcat gagggcgaac
      601 acgccaccgg ccacagcgat ggggacccag ccgccctgac cgatcttcac gatgttggct
      661 ccgaagaacg acaggtccac caccagaaac actccggtca ccagccccgc ccgccaggcg
      721 ggccaattcc atacctcggt catgacccgg tggaacagga gggtggtgat caccatcgtg
      781 cccgtcaccg cgatgccata ggccgcggcc aggttcgagg tggaccggaa gcccagggtc
      841 agtacgatgc accccacggc cagtgccttg ttgacctccg ggagatagat ctgaccgacc
      901 tgactgctcg aggtgtgaac gatcgtcatc cgaggactgt aacccagctg gatggcctgc
      961 tgggtaagcg agaacgctcc ggaaatgagg gcctgcgagg cgacgatggc cgccgcggtc
     1021 gcgatgacga tgagcggcca gagggcccac tccggcgcca gtcggtaaaa cgggttctcg
     1081 gcggcctggg ggtcgtgcag gaccagcgcg gactgtccga agtagttgat catcagcgcc
     1141 ggcatcgcca ccgaaaacca cgccacccgg atgggacgtc gcccgaaatg tcccatgtcg
     1201 gcgtagagag cttcgccgcc ggtgatcacc agcaccacgg ttcccagaac cagaaaggcc
     1261 cgcaggccgt cccgcaggaa gaaatccagg gcgtacaacg ggttgaccgc ccgcagaatc
     1321 gacgggtcga tcaggatgcc gcgcacaccc gtgagcgaga tggtgatgaa ccacaccagg
     1381 atgaccggtc cgaacacttt gccgatgttg ccggtgccgt gcttctgaaa caggaacagc
     1441 acggccagaa tgacggccga cacccagggg acataccgct ccagggccgg cgtgaccaca
     1501 ctcagacctt ccatggcccc gagcaccgag atggccggcg tgatcacccc gtcgccatag
     1561 aggagcgccg cgccgaacag gccgaggagt atggcaacca tggggactcg accgtcccgc
     1621 ttgatcccgc tgaccagcgc ggtcagcgcc aggatcccgc cttccccatt gttgtcggcc
     1681 cgcagcacga acccgaggta cttgatggca atcacgaaca ccagcgacca gaaaaccagt
     1741 gagaggaagc ccaggatgtg ttcgggcgtg gcggcgatgg cgtggggccc ggagaatcct
     1801 tccttgattc cgtagagcgg gctggtcccg atgtccccga acaccacgcc cagcgcaccg
     1861 agcgccagcc ccgccagcgc cttcccggtc ggttgctgct gccccggccg gtgctcggga
     1921 acgctcatgc cggctgccgt cccagccgcc gccgctccag caccgccaac ccgaagagga
     1981 tcgcgatcaa cacggccgac gcgacgcacc agcggcagat cgccttgatg acgaagaact
     2041 cgagatactt gaggtagagg gtgaagccca gggccgcccc gctcagcagg accagccagt
     2101 tgatcagacg gatcgagttc gcctggcgag gactgagtga agccaggctc agccccagca
     2161 ggacggcata gccggcgaca ccgatggcgg ccacctccac gccgaggaac cggctgtagg
     2221 gagagagctg gaccgtctca cacccgccgg tgccacaggt cagggtaccg atctgcccca
     2281 acttgtacag ccacaggtac gcggaaacaa agagcccggc gagcgccgcc acggcggcgc
     2341 ccatgcggaa gctcatggtg aggcgctcag cgaatcgacc agggcccgca accggtcgta
     2401 gggaatcagc ccaggataga gcctgccccc gatgacaaag gtaggagtcg agccgacccc
     2461 gagccgcacc ccttcattgg ccgaggcctg gatccgtccg gcgtacttga gcgagttcat
     2521 gcactcgtca taggcgctga cgtccatgcc caccttctgg gccgcggtcc ggaaggtagg
     2581 gcccgcatcc cggctgaatt gccattccgg ctgggtggcg aaaatctcgt cctggagctc
     2641 ccagaacttg ttctgttcct ggccgcacgc ccccgcgtgg gccgccagcc gggcccactg
     2701 gtgctgggag agcggaaagt cccggaacac ccagcgcacc ttaccggccc tgaccagccg
     2761 gtcgcgcacg taaggccatt ccaccgtggc gaactgctgg caggccgggc attgatagtc
     2821 ggcgtactcg atcacctcca ccttggcgct atcgtctccc agcacgtaac cccggaaccc
     2881 ggccgtatcc gacggttgca ccgtcactgg caccgggatg gacggtgtcg acgaccgatt
     2941 catctgccag aggagaaacc cgatgccggc cgcggcgatg agcccgaaca gcgcgtagaa
     3001 ccgcttcaaa ggggaggggt ccgccatggt tcgtcttcct cgtcgtcgtc gtcatcggtc
     3061 aggaaatcgg ggtcctgctg ggcttcctcg accaaccggc ggtgctcggc cgtctccggc
     3121 gtgtcgtagg tgctgcgcac ttcgtagtgg aacagctcgg agcgggcctc gcccaacaac
     3181 cgcagcagct ccggcgcttc ggcgaggagt cggcctgctc ggtcgagctc ttcgatgcgt
     3241 tgcgcgatga aacgcagcag atcctcgagc tggtcggcgc gggcctcccc gtacacttcg
     3301 tcgtggtcgg ccatggtgag gcccaaatgt aatgacccgg ttcgcgccgt gaagttgtgg
     3361 cgccactgag ggttgcgttg catttcgacc cgggcggctg ttatatttgg gcgctgagtg
     3421 gctcgcgctc gcgacgatct gcactcccaa ggaagagggg catgacgaac agcaacaaga
     3481 agaaggcacg cgtagcgccc gcttcggcgc cgtccctgtt tgaccaggcc agggacgaac
     3541 ttttcagtca catcctgcgg tgcggcgtcg tggaagccga tgcggagcaa cagaaggcct
     3601 ggatggatga caccatgcag tacctggccg agcggtaccc ggatctgaac gaggagcagc
     3661 tcaccgagct gcgggtcctc ggcgaccggt tctgtcagcc agttcggcgc caacccgccg
     3721 gcacggtttc ctgacacgaa tcacgagtca cgagtcgtga gctgaaatag cgggagcgcc
     3781 gccctcattt ggaggacggc gctttgtcgc tggcactctc gatgtgcgct cgcaacccgt
     3841 gcctacttcc gccagcggta tcccgcgcca accctgaccc cgcctcccac ccctgcttcc
     3901 agcatccagc ccgaccgtcc tccgggcctc gactcgatac cgaccagcac cacgatccat
     3961 cctcgcgccg accgggcgac ctgtcccgcc agaccggccc cgccgtaaac acccacaccc
     4021 gagggagcgg cgggctggag cagaaaatgc cacaccacct cggaccgggc cgccaggcgg
     4081 tgctccgcga ccccgagccc cgagtgcagc accaggcgat cgcggtatcc tgggcgccag
     4141 gcccacgcga gcccggccac gagtgccgcc ggccggccgg tggtcgcggt aacctgcatc
     4201 cccagctcgt ggcggacctg tccggtgagg gcgcgcgcgg ccgccaggat cgtggtgacg
     4261 agaatgcaga tgatcctcac ggagccggtt ttcgagctcg tgagtcgcgg ctagccgaga
     4321 tgcagttcgt agctgaccgg aatatccgga ttcaacgaat ggagtaccga gcagtacttc
     4381 tcgatcgaga ggtcgatggc gcggcgggct ttcgcctcgt ccagtccctc gccggcgatg
     4441 gtccagatga actggaggtt gagatagcgt ttcgggtggt cgggcgcgcg caggccggtg
     4501 agctttgcct cacagcgggt cagcgagacc tgcattttct tgaggatgct cacgatatcg
     4561 gctccggcgc acgcggccgc cgccagcagg agcgtcagca tggggccggg cgccgatgta
     4621 ttgtcgccgt cgatggtgat tctcggccca tcgatcgcgc cgccttcgaa tcgaagatcg
     4681 ccggtccagg cggtttggat cacccggata ttggattcgt cggccatcgg gtcacaagtc
     4741 acagggaagg gtcgcgggaa aagtacaccg gaataggcag ggaccctgga cccggttact
     4801 gcccgaccgg tcgcgcctgc cgcttggcca cccgctggta atcccagatg gcatagagcg
     4861 cgatcgcgcc ggtggcccag gccagcgggc gcagcaaggg tgaatcgaag aggaaggccg
     4921 tgatggtcag cgtctgggcc acggtcaccg ctttcccgcc cggacgagcc gggatcgaca
     4981 gcggacggcg gaacacggtc accgccagga aggcgacagc cgccacgatg tcccgcgcca
     5041 gcaccgcgat gatctcgtag aaacgaagtt cccccgaaaa gagcaccacg ccgaacgccg
     5101 cggccatgaa cagcttgtcg accagcgggt cgagaaaggc cccgaaccgc gacgagccga
     5161 accggcgcgc gatcggaccg tccagcaggt cggtcccggc
//
LOCUS       DASWKS010000048         4766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_763759, whole genome shotgun sequence.
ACCESSION   DASWKS010000048 DASWKS010000000
VERSION     DASWKS010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763759"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VGA78_01700"
     CDS             <1..694
                     /locus_tag="VGA78_01700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HEX9892600.1"
                     /translation="PRLLPLTTDTGLVVDRAIKAGHRVLMEGAQGALLDVDHGTYPFV
                     TSSNTTAGGAAVGAGIGPTAIDAVLGVVKAYTTRVGNGPLPTEASDERGAELRRLGGE
                     FGAVTGRARRCGWFDATVVRYAARVNGLSGLAVTKLDVLDSFAEIPVGTAYQIDGDPC
                     EEFPAGVELLERARPVYQSLAGWKRSTGEARTLADLPREARVYLDRLEQLAGVPIRYV
                     SVGTRRDQIIAV"
     gene            719..2041
                     /locus_tag="VGA78_01705"
     CDS             719..2041
                     /locus_tag="VGA78_01705"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HEX9892601.1"
                     /translation="MPESVMDKLVSLCKRRGFVFQSSEIYGGLGSVWDYGPLGVELKK
                     NVKENWWSTMVHARDDIEGLDAAILMHPRVWEASGHVAGFTDPLVDCRVCKARFRADK
                     LEDAQCPRKPSKHPGEHKECDLTEPRQFNLMFKTFIGPVEEQAAVVFLRPETAQGIYV
                     NYQNVLNSSRQKVPFGIAQIGKAFRNEITPGNFIFRTREFEQMEMQFFVKPGSDEEWF
                     ERWRALRMAWHCELGLNPDRLRWHQHTSTELAHYARAAYDIEYEFPFGWHEIEGIHNR
                     GDFDLGRHQESSGKKLEYFDQAANQRYLPYIVETSAGADRVMLTLLVDAYREEVVQGE
                     TRVVLGLHPSVAPIKTAVLPLVNKDGMPEVALKLHHDLRSRFPSFYDDSGAIGRRYRR
                     QDEAGTPFCVTIDGQTIQDQTVTVRERDSMNQERIAIDSVRRYVTERL"
     gene            2138..2833
                     /locus_tag="VGA78_01710"
     CDS             2138..2833
                     /locus_tag="VGA78_01710"
                     /inference="COORDINATES: protein motif:HMM:NF018021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HEX9892602.1"
                     /translation="MRYSDFEALVSRMAAELPQEYLNGVAEIVVSPKVIPHPVRAEIY
                     TLGECVPLPSAGGELEDIQSRVVLYHGSFQAAGHQDPDFDWREEAWETLTHEVRHHLE
                     WRARVPDLEALDRAAESNYARQDGESFDPLFYRDGEVAAAGVFRVEDDYFLEQVVRTR
                     PESAWFGWHGKNYQVEVPADAALPALLVVDGLEEPPPGDLVLVLTRKAGLRDLFRPRA
                     AYQAVVEAKEVGF"
     gene            2880..4094
                     /locus_tag="VGA78_01715"
     CDS             2880..4094
                     /locus_tag="VGA78_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEX9892603.1"
                     /translation="MKSSCITAELARLPRGHLRHLRNLRMALLVAGSLVPIAAMAQAS
                     GSYLVGVVSESGDIITWLKPDGKGGLVQERVVQVGIMPADVDGPHNIAVAPDQRSYFV
                     TIAHGVPFGTLWRFDAATDTVLGRAEVELFPTTIALSPDGEWAFVANSDFHGERPRVN
                     PVSIVHVASMTKVTDLPACDMPHGVKANRAGTKVYVSCMHSDEILELDAGSFEILRRV
                     RVGAGHAMPAGGHTGHQPSPAAARPPRRGADVPPSANVAKECAATFVAVAPDDSKLYV
                     ACNYGNELQVYDAATLRLIKAMPTGAGAYNVEPSSDGTRIIVTNKKDQSISIFDGASL
                     TELKRITTSKKIVHGVAYSPDGRYAYISQESIGADPGAVDVLDLTTLTVTGSIAVPAQ
                     PTGIAILKLGGR"
     gene            4084..4377
                     /locus_tag="VGA78_01720"
     CDS             4084..4377
                     /locus_tag="VGA78_01720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892604.1"
                     /translation="MVADFLMVHQALTTLDGAEVLARAWQFFAERVPHQAAYPEKQGD
                     TWLTLRGQGGEEIALATFPQGQYTQVRASTLLFDQSVMRFLSTLPPAPRETAA"
     gene            4374..4631
                     /locus_tag="VGA78_01725"
     CDS             4374..4631
                     /locus_tag="VGA78_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892605.1"
                     /translation="MSAPLSLRVMVLDSWDEVLIEADPNARVAEVKEQALAQAQVTRP
                     PDSFLVKHHGWEVSETATLADAGIGPNAALIILPRRRQPVR"
BASE COUNT          847 a         1511 c         1623 g          785 t
ORIGIN      
        1 gccgcgcctg cttcccctga ccactgatac cggcctcgtg gtcgaccggg cgatcaaggc
       61 gggacatcgg gtgctgatgg agggggcgca aggcgctctg ctcgatgtgg accacgggac
      121 ctatcctttc gtcacctcct ccaataccac agccggaggg gccgcggtgg gcgcggggat
      181 cggccccacc gccatcgacg cggtgctcgg cgtggtcaag gcctacacca cccgggtggg
      241 aaacggtccg ctcccgaccg aggcgagcga cgagcgcggg gccgagctgc gccgcctggg
      301 cggcgaattc ggcgcggtga ccggccgggc ccgccgctgc ggctggttcg atgcgaccgt
      361 ggtgcgctat gcggcgcggg tgaatgggct ctcgggtctg gccgtgacca agctggacgt
      421 cctggacagt ttcgccgaga tcccggtggg aacagcctac cagatcgacg gggacccgtg
      481 cgaggaattc ccggccgggg tggaactgct ggaacgggcc cgcccggtgt atcaaagcct
      541 cgccgggtgg aaacggtcca ccggcgaggc ccggacgctg gcggatctgc cccgggaagc
      601 ccgggtgtat ctcgaccggc tggagcagct ggccggtgtc ccgatccgct atgtgagcgt
      661 gggaacccga cgggatcaga tcatcgccgt ctgagtgagg ggtctttcag gagtcccgat
      721 gcccgaatcc gtgatggaca agctggtcag tttgtgcaaa cgccggggct tcgtgttcca
      781 atcgtccgag atctacggcg gcctcgggtc ggtgtgggac tacggcccgc tgggcgtcga
      841 gctcaagaag aacgtcaagg aaaactggtg gagcacaatg gtgcacgcgc gcgacgacat
      901 tgagggcctc gatgccgcca tcctcatgca tccgcgggtg tgggaggcat ccggccacgt
      961 ggccggcttc accgatcccc tggtcgactg ccgggtctgc aaggcgcggt tccgagccga
     1021 caagctggag gacgcccagt gtccccgcaa accgtccaag catcccggcg agcacaagga
     1081 atgcgacctc accgagccgc gtcagttcaa cctgatgttc aagaccttca tcgggccggt
     1141 ggaggagcag gccgcggtcg tcttcctgcg gccggagacg gcccagggga tctacgtcaa
     1201 ctatcagaac gtgctcaatt cctcacgcca gaaggtgccg ttcggtatcg cccagatcgg
     1261 gaaggcattc cggaacgaga tcacgcccgg gaatttcatc tttcgaaccc gggaattcga
     1321 acagatggag atgcagttct tcgtgaagcc gggcagcgac gaggaatggt tcgagcggtg
     1381 gcgcgcgctc cggatggcct ggcattgcga gctgggtctc aaccccgacc ggctccggtg
     1441 gcaccagcac accagcaccg aactggcgca ctacgcccgg gcggcctacg atatcgagta
     1501 tgagttcccc ttcggatggc atgagatcga ggggattcac aaccggggcg acttcgacct
     1561 gggccggcat caggaatcct ccgggaaaaa gctggaatac ttcgaccagg cggccaacca
     1621 gcgctacctc ccctatatcg tcgagacctc ggccggcgcc gaccgggtga tgctgaccct
     1681 cctggtcgac gcctaccggg aagaagtggt ccagggcgaa acccgggtgg tgctggggct
     1741 gcatccgtcc gtcgcgccga tcaagaccgc ggtcctgccg ctggtaaaca aggacggcat
     1801 gcccgaggtg gccctcaagc tgcaccacga tctgcggagc cgctttccgt ccttctacga
     1861 cgacagcggc gccatcggcc ggcgctaccg gcgccaggac gaggccggga cgcccttctg
     1921 cgtcaccatc gacggtcaga ccatccagga ccagaccgtc acggtgcggg aacgggacag
     1981 catgaaccag gagcggatcg caattgattc ggttcggcgc tacgtgactg aacgcctctg
     2041 aaagccattg acgattgacg attgccgatt gagcagccgg agcctggtcc ggacaaccgt
     2101 caatcgtcaa tcgtcaatcg tcaatcatca atgaccgatg cgctattccg atttcgaagc
     2161 cctggtgtcc cgcatggccg cggagcttcc tcaggagtac ctgaacggcg tggccgagat
     2221 cgtcgtttcc cccaaagtca tccctcaccc ggtgcgggcc gagatctata cgctgggcga
     2281 atgcgtcccg ctgccttcgg ccggcggcga gctggaggac atccagagcc gggtggtgct
     2341 ctaccatggc tcgttccagg cggccggcca ccaggatccc gatttcgact ggcgggaaga
     2401 ggcctgggag acgttgaccc atgaagtgcg gcatcacctg gagtggcggg cccgggtacc
     2461 ggacctggag gcgctggatc gggcggccga gtcgaactac gcccggcagg acggggaatc
     2521 attcgatccc cttttttatc gcgacggaga agtcgccgcc gccggggtgt ttcgggtcga
     2581 ggacgattac tttctggagc aggtggtacg cacgcgtccc gagtcggcct ggttcggctg
     2641 gcacgggaaa aactatcagg tcgaagtacc cgccgacgcc gcgctacccg cgttgctggt
     2701 ggtcgacgga ttggaagagc cccctccggg cgacctggtg ctggtcctga cccggaaagc
     2761 gggcctgcgt gatctcttcc ggcccagggc cgcctatcag gcagtcgtcg aggcaaagga
     2821 agtcgggttc tgacgatgga tccgcagatg acgcagatga cgccgattga ggtgctgtca
     2881 tgaaaagcag ctgcataacc gcagaattgg cgcgcctccc gcgtggtcat ctgcgtcatc
     2941 tgcgcaatct gcggatggcg ttgctggtag ccgggagttt ggtgccgatc gccgcgatgg
     3001 cccaggcaag cgggtcgtat ctcgttggcg tggtgagtga gtcgggcgat atcatcacct
     3061 ggctcaagcc cgacggcaag ggtggcctgg tccaggagcg ggtggtgcag gtgggcatca
     3121 tgccggccga cgtggatggt ccccacaaca tcgcggtcgc gccggaccag cgttcctact
     3181 tcgtcacgat cgcgcacggc gtgccgttcg gcaccctgtg gcgcttcgac gcggccaccg
     3241 ataccgtgct ggggcgggcc gaagtggagc tctttcccac caccattgcg ctctcgcccg
     3301 acggcgaatg ggccttcgtc gccaattcgg acttccatgg tgagcggccc cgggtcaacc
     3361 cggtgtcgat tgtgcacgtg gccagcatga ccaaggtgac cgatctgccg gcctgtgaca
     3421 tgccccatgg agtcaaggcc aaccgggctg gtaccaaagt gtacgtgtcg tgtatgcaca
     3481 gcgacgagat tctcgagctc gacgccggca gcttcgagat tctgcggcgg gtgcgggtcg
     3541 gagccggcca cgccatgccg gccggcggcc acaccggcca ccagccgtcg cctgcggcgg
     3601 cccgcccgcc ccggcgaggg gccgatgtgc cacccagtgc caacgtcgcc aaggaatgcg
     3661 ccgcgacctt cgtggcggtg gcgcccgatg actcgaagct ctatgtcgcc tgcaattacg
     3721 gcaacgagct gcaggtctat gacgccgcga cgctgcgcct gatcaaggcg atgccgaccg
     3781 gtgccggggc ctacaatgtc gaaccctcgt ccgatggtac ccggatcatc gtgaccaaca
     3841 agaaggacca gagcatcagc atattcgatg gcgccagtct taccgagctc aagcggatca
     3901 cgaccagcaa gaagatcgtc catggcgtgg cgtactctcc cgacggtcgc tacgcctaca
     3961 tctcccagga atcgatcggg gccgaccccg gcgccgtcga cgtcctggac ctcaccacct
     4021 tgaccgtcac cggctcaatc gccgttccgg ctcagcctac cgggatcgcg atactgaagc
     4081 tgggtggtcg ctgacttcct catggtccat caggcattga ctaccctcga cggcgcggag
     4141 gtgctggcgc gcgcctggca attcttcgct gaacgggtgc cgcaccaggc cgcctatccc
     4201 gagaaacagg gtgacacctg gctgacgctt cggggccagg gcggggaaga aatcgcgctg
     4261 gccacgtttc cgcagggtca gtacacccag gtccgggcct cgaccctgct cttcgaccaa
     4321 tcggtgatgc ggttcctctc gaccctccca ccggccccgc gcgagaccgc cgcgtgagcg
     4381 ctccgctgtc gctccgggtc atggtgctcg acagctggga cgaggtgttg atcgaggccg
     4441 atcccaacgc ccgggtggct gaggtgaagg agcaggctct ggctcaggcc caggtgaccc
     4501 ggccccccga ctcgtttctg gtgaaacacc acggctggga ggtttccgag accgcgaccc
     4561 tggcggatgc agggatcggt cccaatgccg cgctgatcat cctgccgcgc cggcgccagc
     4621 cggtccggta acagcaagag acggcagcag ggagcgggag cagggagcag ggagcaggga
     4681 gcagggagca gggagcaggg agcagggagc agggagctgg gagcagggag cagggagctg
     4741 ggagctggga gcagggagca gggaga
//
LOCUS       DASWKS010000049         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1134125, whole genome shotgun sequence.
ACCESSION   DASWKS010000049 DASWKS010000000
VERSION     DASWKS010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1134125"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            666..1712
                     /locus_tag="VGA78_01730"
     CDS             666..1712
                     /locus_tag="VGA78_01730"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX9892606.1"
                     /translation="MLGLFALLYSTERWASSRFPRYLHVYLAIQTVLALVILLLPPQH
                     FFSAALGLVLSGQAVLWLPGRQAYAWIGAFIGVMLFGLVQGQGLLNGLTLGLLYVGGY
                     LFTGAYAGAVGRATAAQHRSEALLSDLQEAHEQLRMYAVQAEQLAVVEERQRMARDLH
                     DSAVQALYGLVLSSEGAARKLAEGKVGLVGERLQEIRRTAHAALHEMRSLIFELRPPD
                     LEKEGLVAALRGRLESVEDRAGVRTSLEVEGDGRLPHNLEAGLYRVIQEALNNALKHS
                     GAEQVTVSLNIGPEQVALEVADDGIGFDTQAAQSGGGLGLRGMVERAQELGGKLSLQS
                     EPGQGTRIRLEVPQ"
     gene            1751..>2334
                     /locus_tag="VGA78_01735"
     CDS             1751..>2334
                     /locus_tag="VGA78_01735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9892607.1"
                     /translation="MVRTGIRHLLETEPGIQLVGEATNGREAVSAVNQTRPDVILLDL
                     VMPELDGTGAIREIKVSHPDVRILVLTTFASDDKLYPAIKAGAMGYLLKDTEPEDLVR
                     AIQQVHRGEYPLSPAIAQKVLREIARRAEEPLTTDPLTEREVEVLGLIARGLTNRQIA
                     DQLVISEATVRTHVGNILGKLHLASRTQAALYALR"
BASE COUNT          408 a          726 c          788 g          412 t
ORIGIN      
        1 catccgtctt gattggggga gattgtgaga tcgacgccgg acgcctgggc ttccgccacc
       61 gacgccgcgc gagccggtaa cttacccgac ggcgaagtga actcgaggga cgagctcggc
      121 gccgggtcag atccgggggt gggggtgctg gtctggtctg gctgcgaagc ggcgctcgcg
      181 gaagggactc ccggagcagc cgcgagggag ccaaccagga tcgaggccgc gagcggcagg
      241 gcccacagca acctgcccga agggcgagtg gttctgagca gtcttcggat cacaaccgag
      301 atggagaggc gcggtttgaa cataggaggt cctccgacct ctttattagg tggttacaag
      361 ccatgcacgc cggtgtgcag ggcatcggtc tgtattacgg ctaaaaccgg cttacggagg
      421 accccgttcc ctccgccagg agggctccgc cgcgccatac tacggccacg acggccagcg
      481 gagatcggca aaactgcgta tttctggctc cgcgccttgc accgtataat ccgggcgtga
      541 ggactctgcg gcacaggccg gcgttctttt atgcctttgg gtcgcttttt gtcctggccg
      601 taggagcccg ttcgcttggg gcatacttcc tcacggggca cccgctgagg tggattgcgg
      661 ccagcttgct cggcttgttc gcgctgctct attccaccga gcgatgggcg tccagtcggt
      721 ttccgcgata cctccatgtg tatctggcca ttcagaccgt cctggcgctg gtgatcttgc
      781 tcctgccgcc ccagcacttc ttctctgccg cccttggcct ggtcttgagc gggcaagccg
      841 tgctctggct gcccggtcgc caggcgtacg cctggatcgg cgctttcatt ggagtcatgc
      901 tcttcggtct cgtgcagggg caaggactgc tcaacggcct caccctcggc ctgctctacg
      961 tcggcggcta cctcttcacc ggcgcctacg ccggggcggt cgggcgggcc actgccgctc
     1021 aacaccgaag cgaggcgctg ctctcggatt tacaggaggc tcacgaacaa ctgcggatgt
     1081 atgccgttca ggccgaacaa ctggcggtgg tggaggagcg gcagcggatg gcgcgggacc
     1141 tgcacgattc cgcagttcag gcgctgtacg ggttggtgtt gtcgtccgaa ggggcggctc
     1201 gaaagcttgc cgaggggaaa gtcgggctgg tcggcgagcg attgcaagag atccggcgga
     1261 cggcccacgc cgcgctgcat gagatgcgat cgctgatctt cgagttgcga ccaccagatt
     1321 tagaaaagga aggactggtc gctgccttgc ggggtcggtt ggaatcggtc gaagatcggg
     1381 cgggtgtgcg cacctccctg gaagtcgaag gagacggccg gttgccccac aacctggaag
     1441 ccgggctcta ccgggtcatt caggaagcgc tcaacaacgc gctgaaacac tcaggagcgg
     1501 agcaggtcac ggtctcattg aacatcgggc cggagcaggt tgcgctcgaa gtggccgacg
     1561 acgggattgg cttcgacacc caggccgccc agtccggcgg cgggctcggc ctgcgcggga
     1621 tggtcgaacg ggcccaagaa ctcggcggca agcttagcct gcagagcgag cccgggcagg
     1681 gcacccgcat ccggctggag gtgccccaat agccgacccg atccgggttt tgatcgcaga
     1741 cgaccacccg gtggttcgga ccgggatccg ccacctcttg gagaccgagc ctggcatcca
     1801 actggtgggc gaagccacga atggtcgaga ggcggtgagc gcggtcaacc agacccgccc
     1861 ggatgtgatc ctgttggatc tggtgatgcc cgagctggac gggaccgggg cgatacgcga
     1921 aatcaaggtc agccaccctg atgttcgaat cctggtgctg accaccttcg cctcggacga
     1981 caaactctat ccggcgatca aagccggtgc gatgggttat ctcttgaagg acaccgaacc
     2041 cgaggatctt gtccgggcga tccagcaggt ccaccgcggc gagtacccgc tgtcgcccgc
     2101 catcgcccag aaggttctgc gggagatcgc gcggcgagcc gaagaacccc tgaccaccga
     2161 cccgctgacc gagcgggaag tcgaggtgct cggactgatc gcccgggggc tcaccaaccg
     2221 acagattgcc gaccagctcg tcatcagcga ggcgaccgtc cggacccacg tcggcaatat
     2281 cctggggaaa ctccatctcg ccagccggac ccaggccgcg ttgtatgccc tgcg
//
LOCUS       DASWKS010000050         3114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1873762, whole genome shotgun sequence.
ACCESSION   DASWKS010000050 DASWKS010000000
VERSION     DASWKS010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873762"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VGA78_01740"
     CDS             complement(<1..663)
                     /locus_tag="VGA78_01740"
                     /inference="COORDINATES: protein motif:HMM:NF045177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892608.1"
                     /translation="MSDVPLAQGPAAALEIRGPDVPGQERILTPDALEFVERLASRFG
                     PRRDQLLARRREVQRRLRAGELPEFLEETAEVRSARWSVAPSAPDLTDRRVEITGPVE
                     RKMMINALNSGARVFMGDFEDALSPPWINVITGQANCMDAVRRTLEYLSPEGKRYALG
                     EELATLVVRPRGWHLEEKHLRLDGRPVSASLVDFGLYFFHNARELLARGSGPYFYLPK
                     LES"
     gene            complement(660..1103)
                     /locus_tag="VGA78_01745"
     CDS             complement(660..1103)
                     /locus_tag="VGA78_01745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892609.1"
                     /translation="MSLQTCEVGGKNWQPMAYNPNTGYFYVPANEWQMDLWNEPIAYK
                     RGAAFLGAGFTIKPVFPDLDQVGQGAVGAGWPAVRGGSFRMGRRGSTLGRRGRQGYRA
                     HQPGRDAVGIPAGVVIRMLAAMRREGVVQELSRTRGLSYTPPGEP"
     gene            1397..>3114
                     /gene="acs"
                     /locus_tag="VGA78_01750"
     CDS             1397..>3114
                     /gene="acs"
                     /locus_tag="VGA78_01750"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX9892610.1"
                     /translation="MTDQLATLLNEQRRFPPPPEFATRANGTQALYEAAARDRLGYWA
                     EQARSLDWVQPWTEVLDWNPPFAKWFVGGKLNAAANCLDRHLTGARRNKAAIIWEGEP
                     GDRRVLTYWDLAREVSRCANALKQLGVRKGDRVAIYLPMIPEAAVAMLACARIGAVHS
                     VVFGGFAAESLRDRGNDAQVRVVITADAGYRRGQIVALKRAVDEALKECPSVEHVVVV
                     ERRAGGQGDESFASMQEGRDHWWHALVGRASASCPAEPMDAEDLLFILYTSGTTGKPK
                     GIVHTTGGYLTQVAATTRYVFDLKDEDVFWCTADVGWVTGHSYIVYGPLAIGMTVLMY
                     EGAPDWPERDRFWEIIARYGVTVFYTAPTAIRAFMKWGTQHPARHDLSTLRLLGSVGE
                     PINPEAWIWYQQHVGGGRCPIVDTWWQTETGGIMITPLPGVITTKPGSATVPFPGICA
                     ELVDTQGKVIPQGGGFLTLNEPWPGMLRTIYGDDERYRETYWSRFPGRYFAGDGAKVD
                     EDGYWWVLGRVDDVLNVAGHRIGTMEVESVLVEHPAVAEAAVVGKPHELKGQALAAFV
                     TLKDGY"
BASE COUNT          495 a         1069 c         1050 g          500 t
ORIGIN      
        1 gctctccagc ttggggaggt agaagtaggg gccgctcccg cgggcgagca gctcgcgcgc
       61 gttgtggaag aagtagaggc cgaagtccac caggctggcg gagacggggc ggccgtccag
      121 ccgcaggtgc ttctcctcca ggtgccatcc gcggggacgc acgaccaggg tcgccagctc
      181 ctcgcccagc gcgtaccgct tgccctccgg gctcaggtac tccagcgtgc gccgcaccgc
      241 gtccatgcag ttggcctggc cggtaatcac gttgatccac gggggcgaga gggcatcctc
      301 gaagtctccc atgaacaccc gggcgcccga gttgagcgcg ttgatcatca tcttccgctc
      361 gaccgggccg gtgatctcga cccggcggtc ggtgagatcg ggcgccgagg gcgctacgct
      421 ccaccgggcg gaccggacct cggcggtctc ctccagaaac tccggcagct cgccggcgcg
      481 aaggcgccgc tgcacctcgc gtcgccgtgc cagcagctgg tcgcgccgag gcccgaaccg
      541 gctggccagc cgttccacga actccaacgc gtccggtgtg aggatccgct cctgcccggg
      601 aacgtcgggc ccgcggatct cgagcgcggc cgccggccct tgggcgagtg gtacgtcgct
      661 catggttccc cgggcggggt ataactgagg cctcgggtcc gggacagctc ctgcaccacg
      721 ccctcccgcc gcatcgcggc cagcatgcga attaccaccc cagccggaat acccacggca
      781 tcccgccctg gttgatgtgc tcggtagcct tggcgacctc gccgccccag agtggaaccg
      841 cgccgcccca tccggaaact accgccacgt actgctggcc atccagcgcc cacagctcct
      901 tgcccgactt ggtcgagatc ggggaacacc ggcttgatgg tgaagccggc gcccaggaac
      961 gccgcgccgc gcttgtaggc gatcggctcg ttccacaggt ccatctgcca ctcgttggcc
     1021 gggacgtaga aatagcccgt attcgggttg taggccatcg gctgccagtt cttcccgccg
     1081 acctcgcacg tctggaggct caccgacggt cgcgccaccc gtcgcgcgac agatgtcccg
     1141 cccgcgacag gtgtcctccc ggatcgtgct tgtgcgttgc cgcaaagcgc accaagttat
     1201 cctccaccta tgcgagccct cgaccccgtt ccgttcgatc cggcatcgca gcgacgtgcc
     1261 gagcgtcagt ggctgactgc cgtgcgcgat cataccaccc cggtcgaagt tcggaacgtg
     1321 gttcggggcg ggtctttcga tctcgataga cctggccacc tcccccccgc ggaaaactct
     1381 tagccacctg aagcccatga ccgaccaact cgctaccctg ctcaatgagc aacgccgctt
     1441 tcccccgccg cctgagttcg ccacccgggc caacggcacc caagcgctct acgaggcggc
     1501 cgcccgcgac cggctgggct actgggcgga gcaggcccgg agcctcgact gggtgcagcc
     1561 atggaccgag gtcctcgact ggaacccgcc cttcgccaaa tggtttgtcg gcggcaagct
     1621 caacgccgcc gccaactgtc tcgaccgtca tctgacgggg gcccggcgga acaaggcggc
     1681 gatcatctgg gagggtgagc cgggcgatcg ccgcgtcctc acctattggg acctggcgag
     1741 ggaggtctcc cgctgcgcca acgcgctcaa gcagctcggc gtgcggaagg gcgaccgggt
     1801 ggcgatctat ctcccgatga tcccggaagc cgcggtcgcc atgctcgcct gcgcccggat
     1861 cggcgcggtg cactcggtgg tgttcggcgg ctttgccgcc gagtcgctgc gggaccgggg
     1921 gaacgacgcc caagtccggg tcgtgatcac cgccgacgcc gggtaccggc ggggtcagat
     1981 cgtcgccctc aagcgcgcgg tcgatgaagc gctcaaggag tgtccctcgg tcgagcacgt
     2041 cgtggtggtg gagcggagag cgggcggcca gggcgacgag tccttcgcct ccatgcagga
     2101 aggccgggac cattggtggc acgcgctcgt ggggagggct tcggcgagct gcccggcgga
     2161 accgatggat gccgaggacc tcctgttcat cctttacacc tcggggacca ccgggaagcc
     2221 caaagggatc gtgcacacca ccggcggcta cctcacccag gtggcggcca cgaccaggta
     2281 cgtgttcgat ctgaaggatg aagatgtctt ctggtgcacc gccgacgtgg gctgggtcac
     2341 cgggcattcc tacatcgtgt acggccccct ggccattggg atgaccgttc tcatgtatga
     2401 aggcgccccc gactggccgg agcgggatcg gttctgggag atcatcgcgc gctacggagt
     2461 caccgtgttc tacaccgcgc ccaccgccat tcgcgccttc atgaagtggg gcacccagca
     2521 tcccgcccgg catgacctct cgacccttcg gctgctgggg tccgtcggtg agccgatcaa
     2581 tccggaggcc tggatctggt accagcagca cgtcggcggc ggccgctgcc cgatcgtgga
     2641 tacctggtgg cagaccgaaa ccggcgggat catgatcact cccctgccgg gggtcatcac
     2701 caccaagccg gggtcggcca cggtcccgtt cccggggatc tgcgccgagc tggtggatac
     2761 ccagggcaag gtgattccgc agggaggcgg gttcctcacc ttgaacgagc cgtggcccgg
     2821 gatgctgcgc accatttacg gcgacgacga gcgctaccgg gaaacctatt ggagccgctt
     2881 cccgggtagg tacttcgccg gtgacggggc caaagtggat gaggacgggt actggtgggt
     2941 gctcggacgg gtggacgatg tgctaaacgt ggccggccac cgcataggca cgatggaagt
     3001 ggagagcgtc ctggtggagc atccggcggt ggccgaagcg gcggtggtgg gtaagcccca
     3061 cgagctcaag ggccaggcac tggcggcatt cgtgaccctg aaggacggct acca
//
LOCUS       DASWKS010000051         2664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1496633, whole genome shotgun sequence.
ACCESSION   DASWKS010000051 DASWKS010000000
VERSION     DASWKS010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496633"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /gene="nrfD"
                     /locus_tag="VGA78_01755"
     CDS             complement(<1..410)
                     /gene="nrfD"
                     /locus_tag="VGA78_01755"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX9892611.1"
                     /translation="MLKTPDWHLLIVWYFFLGGIAGGAYFTAAIADNFGSARDRSVVR
                     IGYILSLLMIGVCGILLILDLGTPSRFLNMVMHFKFWDPMSIGAWMLGVFGLFALVSS
                     ALSLSADEGRAPLRRKISLVGTIFGFFLASYTGVL"
     gene            complement(403..1179)
                     /locus_tag="VGA78_01760"
     CDS             complement(403..1179)
                     /locus_tag="VGA78_01760"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX9892612.1"
                     /translation="MARTLAMFTDTSLCIGCRACQVACKQWNELPMEAPEWTGTYQNH
                     AHFTDKTYRLVRFIEKPQANGELQWLLMSDVCKHCAQAGCLQACPTGAIYRTEYGTVD
                     INQDVCNGCRYCVSSCPFGVVAFNHDTGRANKCTFCNDRIHNGLGPACAKACPTESIQ
                     FGFRDELAAKAEKRVAKLKEMGYSGAQLYGVDSNGPLGGLNAFFLLLDKPSTYNLPEK
                     PLLPQRNVLVDSVLSVGAALLVGVTAVVAFRERGKGDDHA"
     gene            complement(1182..>2664)
                     /locus_tag="VGA78_01765"
     CDS             complement(1182..>2664)
                     /locus_tag="VGA78_01765"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEX9892613.1"
                     /translation="MFVDMYKGVIKGFLADGQNPAVGGPNAKLARAALGKLEWLVVKD
                     IFLTETAEFWKAPGASAKDIKTEVFFLPAAPAAEKDGSLTNTMRLIQWHEKAVNPPGD
                     VTSDAEFFVSLAKRLQKLYAGSKKGRDQGFLATKWEYGDNPKEPNMELVLKEVNGYAT
                     QEITDKAGKVVYKKGQALNTFVHMTDDGKTAGGCWIYTGVTVEGPDGKLINKANLRKP
                     ADDKDYLGHGWGFSWPANRRILYNRASADLKGKPWSEKKKLIWWDAAAPGNEPDKKGK
                     WVGLDVPDFNAFLAPDAKNGDKPFIMRGDLVGAFFGPLNDGPFPEHYEPIESPTANLL
                     SKQQNNPVAKIWSVPDQKNDLAKLGSTDYPYVITTYRLTEHHLSGVMSRYLPMLAELF
                     HSHFAEISHELAGELGIANGERVTVMTPRGKIHVTAMVTHRLKPFMIDGKKTHQIGVP
                     WHWGYNGISKGDITNDLSATVGDPTVYIQETKAFLCNVKKGEV"
BASE COUNT          421 a          836 c          905 g          502 t
ORIGIN      
        1 agcacgccgg tgtagctggc gaggaagaag ccgaagatgg tgcccaccag gctgatcttc
       61 cgccggagcg gggcccgtcc ctcgtcggcg gagagcgaca gcgcggagga gacgagggcg
      121 aagaggccga agacccccag catccaggcc ccgatggaca tcgggtccca gaacttgaag
      181 tgcatcacca tgttgaggaa acggctgggc gtccccagat cgaggatcag gaggatgccg
      241 cacacgccga tcatcagcag cgagaggatg tagccgatgc gcacgacgct gcggtcacgg
      301 gcgctgccga aattgtccgc gatggccgcc gtgaagtagg cgccccccgc gatgcccccc
      361 agaaagaagt accagacgat cagcaggtgc cagtcggggg tcttaagcat ggtcgtcccc
      421 cttgcctcgc tcgcggaacg cgacgaccgc ggtcaccccg accaggagcg cggcgcccac
      481 cgacagcacc gagtccacca ggacattgcg ctgcggcagc agcggcttct cgggcagatt
      541 gtaggtggac ggcttgtcca gcaggaggaa gaaggcgttg agcccgccga ggggcccgtt
      601 gctatccacg ccgtagagct gggcgccgga gtagcccatc tccttgagct tggccacgcg
      661 cttctcggcc ttcgcggcca gctcgtcgcg gaagccgaac tggatggatt cggtggggca
      721 ggccttggcg caggccggcc cgagcccatt gtggatgcga tcgttgcaga aggtgcactt
      781 gttggcgcgc cccgtgtcgt ggttgaaggc caccaccccg aaggggcagg agctgacgca
      841 gtaccggcag ccgttgcaca cgtcctggtt gatatcgacg gtgccgtatt cggtccggta
      901 gatcgccccg gtgggacagg cctggaggca tcccgcctgc gcgcagtgct tgcagacgtc
      961 tgacatcagg agccactgga gctcgccgtt ggcctgcggc ttctcgatga agcgcaccag
     1021 gcgataggtc ttgtcggtga agtgggcgtg gttctggtag gtgccggtcc actccggcgc
     1081 ttccatcggc agctcgttcc actgcttgca cgccacctga caggcccgac agccgatgca
     1141 gagggaggtg tccgtgaaca tcgcgagggt gcgggccatg gctacacctc ccccttcttc
     1201 acgttgcaga ggaaggcctt ggtctcctgg atgtagaccg tggggtctcc caccgtcgcc
     1261 gagagatcat tggtgatgtc gcccttggag atgccgttgt agccccagtg ccagggcacg
     1321 ccgatctgat gcgtcttctt gccgtcgatc atgaacggct tgagccgatg ggtgaccatc
     1381 gcggtcacgt ggatcttgcc ccggggggtc atgacggtca cgcgctcgcc gttggcgatc
     1441 ccgagctcgc cggccagctc gtggctgatc tcggcgaagt gcgaatggaa cagctcggcc
     1501 agcatcggga ggtagcgcga catgacaccc gagaggtgat gttccgtcaa ccggtacgtc
     1561 gtgatcacat atggatagtc cgtcgagccc agcttggcca ggtcgttctt ctgatcggga
     1621 acgctccaga tcttcgcgac cgggttgttc tgctgcttgg acagcagatt cgccgtcggg
     1681 gactcgatgg gctcgtagtg ctccgggaag ggcccgtcgt tgagcgggcc gaagaacgct
     1741 cccaccaagt cgccccgcat gatgaacggc ttgtcgccgt tcttggcgtc gggcgccagg
     1801 aaggcgttga agtcgggaac gtcgagcccg acccacttgc ccttcttgtc gggctcgttg
     1861 ccgggtgcgg cggcgtccca ccagatgagc ttcttcttct cgctccaggg cttgcccttg
     1921 aggtcggcgg aggcccggtt gtacaggatg cgccggttgg ccggccacga gaacccccag
     1981 ccgtgcccga gatagtcctt gtcgtcagcg ggcttgcgca ggttcgcctt gttgatcagc
     2041 ttgccgtcgg ggccctcgac ggtgacgccg gtgtagatcc agcagccgcc cgcggtcttg
     2101 ccgtcgtcgg tcatgtggac gaaggtgttg agggcctggc ccttcttgta gacgaccttg
     2161 ccggccttgt cggtgatctc ctgggtggcg tagccgttga cctccttgag gaccagctcc
     2221 atgttcggct ctttggggtt gtcgccgtac tcccacttgg tggcgaggaa tccctggtcg
     2281 cggcccttct tcgagccggc gtagagcttc tgcaggcgct tggccaagct cacgaagaac
     2341 tcggcgtccg aggtcacgtc gccgggcggg ttcaccgcct tctcgtgcca ctggatcagc
     2401 cgcatggtgt tggtgaggct gccgtccttc tcggcggcgg gagcggcggg caggaagaag
     2461 acctcggtct tgatgtcctt cgcgctcgcc ccgggcgcct tccagaactc cgcggtctcg
     2521 gtcaggaaga tgtccttgac caccagccac tcgagcttgc ccagggcggc ccgggccagc
     2581 ttggcgttgg gtccgcccac cgccgggttc tgcccgtcgg ccaggaagcc cttgatgacg
     2641 cccttgtaca tgtccacgaa catg
//
LOCUS       DASWKS010000052         1810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1496986, whole genome shotgun sequence.
ACCESSION   DASWKS010000052 DASWKS010000000
VERSION     DASWKS010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496986"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1810)
                     /locus_tag="VGA78_01770"
     CDS             complement(<1..>1810)
                     /locus_tag="VGA78_01770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892614.1"
                     /translation="SDISYPTGAGDASIAAGNYTLNMYFNALPTAGSPAVAATNTSVN
                     NTANTQHTVSLPSGIQSGNLLIVVFGYKAGSSQTITWPGGWTQFFRSDRSTNVGVAAA
                     YRQADGSEGATITVQTGTSAKTSHLSYRITGAENPATQPPESLDSNGNSTTPDPPSLT
                     PTGGAKDYLWIAVELNNHTGTSIPITAFPANYSGSIQANGDTNNSTTGAAYRQLNAAS
                     EDPSNFSIGTAIAWAAGTLVVHPASNPSVDVQVSVSHTALDGSGATTIVQSSTTTINS
                     STPDPLTISIDSGALQTFTAADPRLLRVNVQVTAVSGSGFVLDFDGSCAANRCSSLDT
                     PAVTVPEVTLLLVVVVVLIPILTYILTEKRRRRIAARLISVVVSLLLALGLLSRDVLV
                     AIAAPDSFYLHDTDTSGITPAGEYMNSTAPTEPTPPAEFPAEPIYRSIGTNSGTLYST
                     GNASINAGQTAVNFGGGASLPSPTAVGAVGVGDKLVIGSETFFILSRDSATQVTVQAA
                     AASTHTDEAYTITRAYNSFQAWEDPCGATPCLPTSSGGRGGNLVGENRIEVGVAYKDG
                     VFSPTTTTLVNGSTTDANYYMRLTVGVGQRHSGVAGT"
BASE COUNT          300 a          535 c          633 g          342 t
ORIGIN      
        1 gtgccggcca ccccgctgtg gcgctgccca acgcctaccg tcagccgcat gtagtagttg
       61 gcatccgttg tcgagccgtt gacaagcgta gtagtcgtcg gagagaagac cccatccttg
      121 taagccaccc caacttcgat ccggttctcc ccgaccaggt tccctccccg gccgccactg
      181 gaggtcggca ggcagggggt cgcgccgcac ggatcttccc aggcctggaa gctgttgtag
      241 gcccgggtga tggtgtaggc ctcgtcggtg tgggtcgagg cggcggccgc ctgcaccgtc
      301 acctgagtgg cgctgtccct ggagaggatg aagaaggtct ccgatccaat gaccagcttg
      361 tcccccaccc cgacggcacc gacggctgtc ggcgacggta ggctcgcccc tccaccgaag
      421 ttgaccgctg tctggccggc attgatcgag gcattccctg tgctgtagag cgtcccggag
      481 ttagtaccga tcgagcggta gattggctca gcagggaact cggccggcgg ggtcggctcg
      541 gtcggcgccg tggagttcat gtactcgcct gccggcgtga tcccgctcgt gtcggtatcg
      601 tgcaggtaga aggaatctgg tgcggcaatc gccaccagca cgtcgcggga gagcaggccg
      661 agggccagta gcagagaaac aaccacgcta atgaggcgag ccgcaatacg ccggcgccgc
      721 ttctcagtca ggatgtaggt gaggatggga ataagtacga caaccactac cagcagcagc
      781 gtcacctctg gcacagtcac cgccggcgtg tccaagctgc tgcagcggtt ggcggcacag
      841 ctgccgtcga agtccagaac aaagcccgag ccgctcactg ccgtcacctg gacgttgacc
      901 cgcagcaagc gcggatcggc ggcggtgaag gtctgcagcg cgccggagtc aatcgagatc
      961 gtcaggggat ccggtgtgct ggaattgatg gtggtcgtcg aggactggac gatggtcgtg
     1021 gcgcccgatc catccagggc cgtgtgggag accgagacct ggacatccac cgaggggttt
     1081 gaggccgggt gcaccaccag ggttcccgcg gcccaggcga tggcggtgcc gatcgagaaa
     1141 ttgctcggat cctccgaagc cgcgttgagt tggcgatagg ctgccccggt ggtgctgttg
     1201 ttggtgtcac cgttggcctg gatgctgccc gaataattcg ccggaaaggc cgtgattggg
     1261 atcgaggttc cggtgtggtt gttcagctcg accgcaatcc agaggtaatc cttggctccg
     1321 ccggtcgggg tcaggctcgg cggatccggc gtggttgagt tcccattgga gtcgaggctc
     1381 tccgggggct gggtcgccgg gttttcggcc ccggtgatcc ggtagctcag gtgggaggtc
     1441 ttggcgctcg taccggtctg gacggtgatg gtcgcgcctt cgctgccatc cgcctgccga
     1501 taagcggctg ccacccccac gttggtcgag cggtccgatc ggaaaaactg ggtccatccg
     1561 ccgggccagg tgatcgtctg ggagctaccc gccttgtatc cgaaaacgac gatcagcagg
     1621 ttgccggact ggatccccga gggcaggctg accgtatgtt gggtattggc tgtgttgttg
     1681 accgacgtgt tggtggcggc gaccgcagga gagcccgcgg tgggcagcgc gttaaagtac
     1741 atgttgaggg tgtagttgcc ggccgcgatc gaggcgtcgc ctgccccggt cgggtaactg
     1801 atatccgaat
//
LOCUS       DASWKS010000053         2264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1874491, whole genome shotgun sequence.
ACCESSION   DASWKS010000053 DASWKS010000000
VERSION     DASWKS010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1874491"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VGA78_01775"
     CDS             <1..240
                     /locus_tag="VGA78_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX9892615.1"
                     /translation="MSRKGIEYGSITLHPDGIPHGPHPGRTEASIGAKATNELAVMMD
                     TFRPLQVASDALGIEDPKYFQSWIEQGSAFNPPTS"
     gene            339..>2264
                     /locus_tag="VGA78_01780"
     CDS             339..>2264
                     /locus_tag="VGA78_01780"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9892616.1"
                     /translation="MLTLLALLSFQAPATPQTPTVQQASPIARLVVTPGLRVTMPAQD
                     SIRLSATPVDAEGRPVPGATVQYFSSGGRFEGAVDSTGKVTSGSTGTITVTIVARVPG
                     TRPVTERVEVSMVAGPAARIDVGPATGMLVVGQRIRLEATAFSRAGDRRYQPLAWSSS
                     ASRVASVRADGMVTALAPGEAVIAARETGAGESGPRGELRVRVLATPVASVDLTPATT
                     AAKQGDVIRFKAVAKDAQGKEIPGLTPQWTMSSGKGVIEADGAFTGYDPGTYVISASF
                     GNRSADATVTLAPRDVRRPATVVGRLPRTRFTTEEVWIHPNGRNAYLGSGSGGDVLYT
                     LDISDPAKPTVTDSIVTNTRRVNDVMSTPDGKVIVFTREGASDRRNGIVIASTEDPAH
                     PKVIAEFTEGVTAGVHSAFIYQQPKYGTHVYLTNDGTGAMHVIDISDPSQPREVAQWK
                     TSRPDAGRTLHDIDIQNGLAYLSYWNDGLVVLDVGNGIKGGTPASPQLVSQVKYDLNA
                     LYRDVEAAGGPGFIRGTHTAWRHKNYVFIADEVFPASGVRGAKDASAGRAYGRMQVVD
                     VTDLAKPKIVAWYEPEFGGVHNIWVAGDTLYMGAYNAGFRAFDITGELRGDLRAQGRE
                     MVHVHTADMEGFVKNAAM"
BASE COUNT          399 a          776 c          744 g          345 t
ORIGIN      
        1 atgagccgga aggggatcga gtacggcagc atcacgctgc atccggacgg gatcccccac
       61 gggccccacc cgggacggac cgaggccagc atcggcgcca aggccaccaa tgagttggcg
      121 gtgatgatgg ataccttccg cccgctgcag gtggccagtg acgcgctcgg catcgaggac
      181 ccgaaatact ttcagtcgtg gatcgagcag ggatcggcgt ttaatccgcc gacctcatga
      241 ccaacattga tgattgacga ttgacgattg ggccatgcga cgcgcagtcg tcaatcgtca
      301 atcgtcaata acccaccatt tcaccgtcta gcggactaat gctgaccctt ctcgctctct
      361 tgagttttca ggccccggcc acgccgcaaa cgccgactgt ccagcaggcc agtcccatcg
      421 ccaggctggt ggtcaccccc ggtcttcgtg tgaccatgcc ggcacaggac agcatccgtc
      481 tctccgccac cccggtcgac gccgagggac ggcccgtccc gggcgcgacg gtgcagtact
      541 tcagttcggg cggccgtttc gagggggcgg tggattcgac cgggaaggtg acctcgggct
      601 ccaccggcac catcaccgtg accatcgtgg cccgggtacc gggaacccgg cccgtgaccg
      661 agcgggtgga ggtcagcatg gtcgcgggac ctgccgcccg gatcgacgtc ggtccggcca
      721 ccgggatgct ggtggtcggt cagcggatcc ggctcgaagc cactgcgttc tcccgggcgg
      781 gcgaccggcg ctaccaaccg ctcgcctgga gcagctccgc ctctcgggtg gcgtcggtcc
      841 gcgccgacgg gatggtgacc gcgctcgctc ccggtgaggc cgtcatcgcc gcccgggaga
      901 ctggagccgg ggagagcggt ccccggggcg agctccgggt ccgcgtcctg gccacgccgg
      961 tggcctcggt cgatctcacg ccggccacca ccgcggcgaa gcagggggat gtcattcggt
     1021 tcaaggcggt ggcgaaggat gcccagggga aggagatccc cggtctgacg ccgcagtgga
     1081 ccatgtcttc cggcaagggc gtgatcgaag ccgacggggc gttcaccggc tacgacccgg
     1141 ggacctatgt aatcagcgcc tccttcggga accgaagcgc cgatgccacc gtgacgctcg
     1201 cgccccgcga tgtgcgccgt cccgcgaccg tggtgggacg cctgccgcgc acccgcttca
     1261 ccaccgaaga ggtctggatc catcccaacg gccgcaatgc gtatctcggc agcggctccg
     1321 gcggcgacgt gctctacacc ctcgacatca gcgatccggc gaaacccacg gtgaccgatt
     1381 cgatcgtcac caacacccgt cgggtcaacg acgtgatgtc gacccccgac ggcaaggtca
     1441 tcgtgttcac ccgcgaggga gcgtccgacc gccgcaacgg catcgtcatc gcgtcgaccg
     1501 aagacccggc tcaccccaag gtcatcgccg agttcaccga aggagtgacc gcgggagtac
     1561 actccgcgtt catttatcag cagccgaaat acggcaccca cgtctacctc accaacgacg
     1621 gtaccggtgc catgcacgtg atcgacatca gcgatccgtc ccagccgcgg gaagtggccc
     1681 agtggaaaac gtcccggccc gacgccggtc ggaccctgca cgacatcgac atccagaacg
     1741 gcctcgccta cctgagctac tggaacgacg gcctggtggt gctcgacgtc gggaacggga
     1801 tcaagggagg caccccggcc agcccccagc tggtctccca ggtcaagtac gacctcaacg
     1861 cgctctaccg cgatgtggaa gcggccggcg gtcccgggtt cattcgggga acccacaccg
     1921 cgtggcgcca caagaactat gtcttcatcg ccgacgaggt ctttcccgcg agcggagtgc
     1981 ggggcgcgaa ggacgcgtcg gcgggacggg cctacggccg gatgcaggtc gtcgacgtca
     2041 ccgatctggc caagccgaag atcgtggcgt ggtacgagcc ggagttcggc ggggtgcaca
     2101 acatctgggt ggcgggcgat accctctaca tgggcgccta caatgccggc ttccgcgcct
     2161 tcgacatcac gggcgagttg cggggtgacc tgcgggccca gggccgggag atggtccacg
     2221 tccacaccgc cgacatggag ggcttcgtca agaatgccgc catg
//
LOCUS       DASWKS010000054         7545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1135792, whole genome shotgun sequence.
ACCESSION   DASWKS010000054 DASWKS010000000
VERSION     DASWKS010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1135792"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VGA78_01785"
     CDS             <1..466
                     /locus_tag="VGA78_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Holliday junction DNA helicase RuvB C-terminal
                     domain-containing protein"
                     /protein_id="HEX9892617.1"
                     /translation="LARIVARSAAIFDVPVDEAGGSEIARRSRGTPRVANRLLRRVRD
                     YAQVRADGRITAQVAADALARLNVDEFGLDDMDARILSTIIEKFGGGPVGLTTLAAAV
                     GEDPGTLEEVYEPFMMQQGFLDRTQRGRVATAMAYKRLGIRPPAGQASIFEP"
     gene            456..1520
                     /gene="queA"
                     /locus_tag="VGA78_01790"
     CDS             456..1520
                     /gene="queA"
                     /locus_tag="VGA78_01790"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEX9892618.1"
                     /translation="MSPDRRSSLSDFDYDLPAELIAQRPPARRGDSRLLLVRRADGRT
                     GGRAEEAFEDRVFPDLATLIPSSDLLVLNTTRVRHARFIGTRPSGAPAEVLLIHPAPN
                     GGWVALGKPGSALRPGKRVRIGPDAFVETVEVLEDGNRVIRFVGTTAEEAMQRFGRLP
                     LPPYITREPDQSDEDRYQTVFADREGSVAAPTAGLHFTPQLLVALGERGVRLGTLELE
                     VGPGTFKPVETEILSDHVMHPERYQISADLAEGIGATRALGGKIWAAGTTVVRALESA
                     AEKGGKVRAGADETRLFITPGYRFKVVDRLITNFHLPRSTLLMLVSAFAGAETVRTAY
                     RHAIEERYRFYSYGDAMVVI"
     gene            complement(1572..3194)
                     /locus_tag="VGA78_01795"
     CDS             complement(1572..3194)
                     /locus_tag="VGA78_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9892619.1"
                     /translation="MAPSSAAAQTVELRVIEDSSRRPLAGVVVRLVREGQPVIMGLSN
                     PAGRVVLRAPSGGSYELRANRIGYEGMTPFRLVLEAGATVAQLVVMPRTVRRLPELTV
                     TGDTRCRRSPGSGSLAAAIWEEVQTALSANRITAEQGLEIVHSIRYERDLSPTREMLR
                     ERLLGSGVTRGQPFVSLPPRQLARSGFVYQVADTVQYAAPDAALLLADEFVSSHCFKV
                     DPQGPAAGLVGLAFEPAGTSRLPDVKGTLWIDRQSRELRYLEYTYTGLRGPEGLGDPG
                     GEIHFQRLASGAWIVREWFIRMPRAAERRPRPTVGGDRWQLVGWLEQGGRASRNAPPG
                     LPGGGARSAVQGVAFDRLHQTALAGALVTVDGEPDSTRTDSSGAFRLEIAGQGPRLLR
                     VSHPLLGLVADSSTQEIRLAPGRAATPRIDVPPVGRFVQTFCHEQKGSSGVIGMARDS
                     SGTPLSGARIRAAWFRSLDEYLLRGRVVTRALTVESDPRGVFAFCDLPGDWGVRLELL
                     GEGDRALGYVTFRVIAGEFSWQDLRPLPALGR"
     gene            3255..4445
                     /gene="tgt"
                     /locus_tag="VGA78_01800"
     CDS             3255..4445
                     /gene="tgt"
                     /locus_tag="VGA78_01800"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX9892620.1"
                     /translation="MFEFTLDAVDGATRAGTLILPHGQVRTPAFMPVGTHGAVRGLHP
                     AEVERAGAQIILGNTYHLHLRPGEEVIRTMGGLHRFSTWPRPMLTDSGGFQVFSLHGL
                     RKISEDGVEFVSHIDGSIRTLTPESSMAIQWALGADIAMAFDHVVPGQASHDLAEEGM
                     ERTLRWLERCGRRHAELTDGRSDGRSDGRTDENGRQSVSPSVRQTLWPIIQGGTHEDL
                     RLRSLTGTLERGPWTGIAIGGLSVGESKPVMHRILEDLIPAMPPETPRYLMGVGFPED
                     LVQGIARGVDLFDCVAATRNGRHGSAWTMTGRVNIRNAANRTAEAPLDPDCDCETCSR
                     FSLGYLRHLFVAQELLGLRLVSIHNVRFLLRVTELARAAIVAGEFERWSREWLRRYHE
                     REIR"
     gene            4442..4768
                     /gene="yajC"
                     /locus_tag="VGA78_01805"
     CDS             4442..4768
                     /gene="yajC"
                     /locus_tag="VGA78_01805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX9892621.1"
                     /translation="MTLSLWSVSLLAPEGGSAGLSILLFQIGAIALVFYLLVIRPQGK
                     ARKRHAEMLAQLKRGDEVMTAGGIIGKVKDLKDDRVTVESGTSSVVVDRSRIVKVGDA
                     MAPGQQ"
     gene            4765..5295
                     /gene="def"
                     /locus_tag="VGA78_01810"
     CDS             4765..5295
                     /gene="def"
                     /locus_tag="VGA78_01810"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX9892622.1"
                     /translation="MSLRDLHLLGSPALRTRSTEVDVVDDAVRGLIDDLFETMDAAKG
                     VGLAANQIGITLRVAVIDAEGQRLAMVNPVLTAPQGKAKAEEGCLSIPEAYAHVTRPE
                     RILLQAIDRDGKPFSLEAEGLTARAIQHEVDHLDGILFIDHLSPLKRQLLLARYKKDH
                     RGEGIIKQLKAEEAGR"
     gene            5300..6223
                     /gene="fmt"
                     /locus_tag="VGA78_01815"
     CDS             5300..6223
                     /gene="fmt"
                     /locus_tag="VGA78_01815"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX9892623.1"
                     /translation="MRVVFFGTPAFAVPSLRALVDEGADVVGVVTQPDRAQGRSRSIL
                     IPPPVKLAGEEMGLPVHQPERPRGDVFVAWLRRLNADLGVAVAYGHILRPEVLAVPSG
                     GMVNVHASLLPRHRGAAPIQAAILANDPVTGVSIMQMDAGMDTGPVLHQLTTPISAVD
                     TGGSLTDRLASLGAQALIEALVMLQRGELRPVPQDAARATLAPKIDHDTARIRWEEGA
                     DAAARRIRAFDPVPGAWTVLDGLEVKCFGPSILPQPAEPGLVVGTEPMLIIGAGPGSV
                     AVAQVQPAGKRRMPASEWSRGRGARAGQRFA"
     gene            6262..6849
                     /locus_tag="VGA78_01820"
     CDS             6262..6849
                     /locus_tag="VGA78_01820"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX9892624.1"
                     /translation="MRTSHHLGASAAAIASLGPAVALVARDPAASASDLSTFTVRLLA
                     IAHPAEAAVIVSARPDIAASLGADGVQLRAGDLAPGDARQVLPTGWIGRSVHTASEAV
                     DAVAAGADYLVAGNIWQTPTHPDRPGIGLGLIETLASLGRPVIAIGGITADRAREVHA
                     AGGYGIAAIRALWSARDPAAAAAALLEAWTTSTEY"
     gene            6882..7088
                     /gene="thiS"
                     /locus_tag="VGA78_01825"
     CDS             6882..7088
                     /gene="thiS"
                     /locus_tag="VGA78_01825"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEX9892625.1"
                     /translation="MDLSITVNGQLRSVPGPATLADLLAHLSLDPAQVVVELNRQIVR
                     RPRLPEVTLKPGDTVELVHFVGGG"
     gene            7092..>7545
                     /locus_tag="VGA78_01830"
     CDS             7092..>7545
                     /locus_tag="VGA78_01830"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEX9892626.1"
                     /translation="MDTPFSIAGRAFRSRLMVGTGKYRSNEEMVAAIEASGAEVVTVA
                     VRRVDLDRSKEAGVLYHLDPETWFLLANTAGCYSADEAIRYARLAREAGFNEFIKLEV
                     IGDKETLLPDVAGLIEATGVLAKEGFAVLAYTNDDLISALRLEDAGAAA"
BASE COUNT         1184 a         2560 c         2653 g         1148 t
ORIGIN      
        1 cctggcgcgg atcgtcgccc ggtcggccgc catcttcgat gtgccggtcg acgaggccgg
       61 cggcagcgag atcgcccggc gcagccgggg gactccccgg gtggccaacc ggttgctccg
      121 gcgagtgcgc gactacgccc aggtccgggc cgacgggcgg atcaccgccc aggtggcggc
      181 agatgcgctg gcccggctca acgtggatga attcgggctg gatgacatgg acgcccggat
      241 cttgagcacg atcatcgaaa aattcggagg cgggccggtc gggctcacca ccctggcggc
      301 cgccgtgggt gaggatcccg gcacgctgga ggaagtctac gagccgttca tgatgcagca
      361 ggggttcctc gaccgcaccc agcggggccg ggtggccacc gcgatggcct acaagcgcct
      421 gggaatacgc ccgccggcgg ggcaggccag catctttgag ccctgaccgc aggtcctcgc
      481 tctccgattt cgattatgac ctcccggccg agctgattgc ccagcggccc ccggcgcggc
      541 ggggcgacag tcggttgttg ctggtgcgac gggcggacgg gcggacgggc ggacgggcgg
      601 aggaggcgtt cgaggaccgg gtgttccctg atctggcgac gctgattccc tcgagtgacc
      661 tgctggtgct caataccacc agagtgcggc acgcccgatt catcggaacc cggccgtcgg
      721 gcgcgccggc ggaagtgctg ctgatccatc cggcgcctaa cggcgggtgg gtggcgctgg
      781 gcaaaccggg gagcgcgttg cgcccgggaa agcgagtgcg gatcggcccc gacgcgttcg
      841 tggaaacggt cgaggtcctg gaggatggca accgggtgat ccggttcgtt ggcaccaccg
      901 cggaagaagc catgcagcgc ttcggccggc tgcccctgcc cccttacatc acccgcgagc
      961 ccgaccagag cgacgaggat cggtaccaga ccgtcttcgc cgaccgggag ggcagtgtgg
     1021 ccgcccccac ggcaggactg catttcaccc cgcagctgct ggtggcgctg ggagagcgcg
     1081 gcgtgcggct cggcacgctc gaactggagg tgggtccggg cactttcaag ccggtcgaga
     1141 ccgagatcct gtccgatcat gtcatgcacc cggagcgata ccagatctcg gccgatctgg
     1201 ccgaaggcat cggggccacc cgggcgctgg gagggaagat ctgggcggcg ggcaccacgg
     1261 tggtgcgggc tctggaatcg gcggcggaga agggcggcaa ggtccgggcg ggagccgacg
     1321 agaccaggct gttcatcacg ccgggctacc gcttcaaagt ggtggaccga ctgatcacca
     1381 actttcacct gccccgctcg acgctgctga tgctggtgag cgccttcgcg ggagctgaga
     1441 ccgtccggac cgcttaccgg cacgccatag aggagcggta ccgtttctat tcttatggcg
     1501 atgcgatggt agtgatttaa ttgtgcgagg gttcccgcct gtccgcctgt ccgtccgccc
     1561 gattcagggc ctcagcggcc cagggccggt agcggccgca ggtcttgcca gctgaactcg
     1621 ccggcaatca ctctgaaggt gacatagccg agcgctcgat cgccctcccc cagtagttcc
     1681 agccgcaccc cccaatcacc gggcaggtcg cagaaggcaa atactcccct cggatcgctt
     1741 tcaaccgtca aggcgcgtgt gacgacgcgc ccgcgcagca ggtattcatc gaggctccgg
     1801 aaccacgcgg cccggatgcg ggctccactg agcggcgtcc cgctgctgtc gcgagccatg
     1861 ccgatcaccc cggacgatcc cttctgttcg tgacagaagg tttgcacgaa tcggcccacc
     1921 ggcgggacgt cgatccgggg agtggcggca cggccggggg ccagccggat ttcctgagtt
     1981 gagctgtcgg ccaccagccc cagcagcggg tgggacaccc gcagaagtcg cggaccctgg
     2041 ccggcgatct cgagccggaa cgctccgctg gaatcggtac gggtggaatc gggctcgccg
     2101 tcgacggtga ccagcgcacc cgcgagcgcc gtctggtgaa gccgatcgaa ggccacgccc
     2161 tgcaccgccg accgggcgcc cccgcccggc agcccggggg gcgcgttccg gctggctctc
     2221 cctccctgct ccagccaccc gaccagctgc caacggtcgc cccccacggt agggcggggg
     2281 cggcgttccg ccgcgcgcgg catccggatg aaccactcgc gcacgatcca ggcaccggag
     2341 gccagacgtt ggaagtggat ctcgcccccg gggtcaccca gtccctcggg accgcgcagc
     2401 ccggtatagg tgtattccag ataccgcagc tcgcggctct gacggtcgat ccagagggtg
     2461 cctttgacat cgggaaggcg actggtcccg gcgggctcga aggccagccc caccagtccc
     2521 gcggccgggc cctggggatc gaccttgaag cagtgggagc tcacgaattc gtcggccagc
     2581 agcaaggccg cgtccggcgc cgcgtactgt accgtgtcgg ccacctgata cacaaagccg
     2641 ctccgggcca gctgccgggg aggaagcgag acaaagggct ggccccgggt cactccgctt
     2701 ccgagcaagc gctcccgcag catctcgcgg gtcggggaga gatcccgctc gtagcggatg
     2761 ctgtgaacta tttcgagacc ctgctcggcg gtgatacgat tggcactgag cgcggtctgc
     2821 acctcttccc agatcgccgc agccaggctc ccgctccccg gggaccggcg gcagcgggtg
     2881 tcacccgtga cggtgagttc cggcaggcgg cggacggttc ggggcatcac caccaactgc
     2941 gccacggtgg ccccggcctc gagcaccagc cgaaagggcg tcatcccctc gtagccgatc
     3001 cggttggcgc gcagctcgta gctgccgccg ctgggcgcgc gaagcaccac tcggcccgcc
     3061 gggttggaca gtcccatgat gaccggttgg ccttcccgca ccaggcgaac caccacaccg
     3121 gccagcggcc ggcgggagct gtcctcgatc actcgcagct ccacggtctg cgccgccgcg
     3181 gacgatgggg ccatcgtcgc aagaatcagg atcagccgac gggagatcgg agtcatgggc
     3241 gttaatttct ggccgtgttc gaattcacgc tagacgcggt agacggcgca actcgggccg
     3301 gaaccctcat cctgccgcac gggcaggtgc ggactcccgc gttcatgccg gtgggcaccc
     3361 acggcgcggt gcgggggctc catccggccg aggtggagcg ggccggggcc cagatcatcc
     3421 tgggcaatac ctatcatctg catctgcggc cgggcgaaga ggtgatccgg accatgggcg
     3481 ggttgcaccg tttctccacc tggccgcggc ccatgctcac cgactccggc gggttccagg
     3541 tgttttccct gcacggactc cgcaagatca gcgaggacgg cgtcgagttc gtgagccaca
     3601 tcgacgggtc gatccggacc ctcacgccgg agtcgtcgat ggccatccag tgggccctgg
     3661 gcgcggacat cgcgatggca ttcgaccatg tggtaccggg acaggccagc cacgatctgg
     3721 cggaagaagg gatggagcgg acgctgcggt ggctggagcg ctgcgggcga cggcacgcgg
     3781 agctgacgga cggacggtcg gacggacggt cggacggacg gacggacgag aacggccgtc
     3841 agtccgtcag tccgtccgtc cgtcagacat tgtggcccat catccaggga ggaactcacg
     3901 aggacctgcg gctccgctcc ctcaccggaa ccctggagcg cggcccctgg accggcatcg
     3961 cgatcggcgg gctctcggtg ggcgagtcca agcccgtcat gcatcgtatt ctggaggatc
     4021 tgataccggc catgcccccc gaaacgcccc gttatcttat gggcgtcggg ttccccgagg
     4081 acctggtgca ggggatcgcg cggggtgtgg atctgttcga ctgcgtggcc gcgacccgga
     4141 acggccggca tggcagcgcc tggaccatga ccggccgggt caacatccgg aacgcggcca
     4201 accggaccgc cgaggcgccg ctcgaccccg attgtgactg tgagacctgc agccgtttct
     4261 cgctgggcta cctgcgacat ctgttcgtgg cgcaggaact cctcggactc cggctggtct
     4321 cgattcacaa tgtgcgcttc ctgctccgcg tgacggagct ggcccgcgcg gcgatcgtgg
     4381 cgggagagtt cgaacgttgg agccgggagt ggctccggcg ataccatgaa cgagagatca
     4441 gatgaccttg agcctgtggt cggtgagcct gctcgccccc gaggggggat cggcggggct
     4501 gtcgattctg ctgttccaga tcggcgcgat cgcgctggtg ttctacctcc tcgtgatccg
     4561 gccccagggc aaggcccgca agcggcacgc ggaaatgctg gcccagctca agcggggcga
     4621 cgaggtgatg accgccggcg gcatcatcgg gaaggtcaag gatctcaaag acgatcgggt
     4681 caccgtcgag agcggcacgt ccagcgtagt ggtggaccgc tcccggatcg tgaaggtggg
     4741 cgacgccatg gcaccaggac agcaatgagt ctgcgggacc tgcacctgct gggttctccc
     4801 gcgcttcgga cccggagcac cgaggtcgac gtggtggacg atgcggtgcg cggcctgatc
     4861 gacgacctgt tcgagaccat ggacgcggcc aagggcgtgg ggctggcggc caaccagatc
     4921 ggcatcacgc tcagggtggc cgtgatcgac gccgaaggcc aacggctggc gatggtcaat
     4981 ccggtgctca cggcgccgca ggggaaggcc aaggccgaag aaggctgcct gtcgatcccc
     5041 gaggcctacg cccacgtcac ccggccggag cggatcctgc tccaggcgat cgaccgcgac
     5101 ggcaagccgt tcagcctcga ggccgaaggc ctgacggcgc gagcaatcca gcacgaagtc
     5161 gaccacctgg acggcattct gttcatcgat cacctgagtc cgctgaagcg ccagctcctg
     5221 ctcgcccggt acaagaagga tcaccggggc gagggtatca tcaagcaact gaaagctgaa
     5281 gaagccggtc gatagtcgca tgcgcgtggt gtttttcggg accccggcct tcgcggtccc
     5341 gtcgctccgc gctctcgtgg acgagggcgc ggatgtggtg ggtgtcgtca cccagccgga
     5401 ccgggcccaa ggacggtcgc gctcgatcct gattcccccg ccggtcaagc tcgccggcga
     5461 agaaatgggg ctgccggtgc atcagccgga gcgaccccgg ggtgacgtct tcgtggcctg
     5521 gctccgccgg ctcaatgccg atctgggtgt cgcggtcgca tacggccaca ttctccgccc
     5581 ggaagtcctg gcggtcccct ccggtggcat ggtcaacgtg cacgcctcgc tgctgccccg
     5641 acaccggggt gccgctccca ttcaggcggc cattctcgcc aacgacccgg tcaccggcgt
     5701 cagcatcatg cagatggatg ccgggatgga caccggcccc gtgctgcacc agctcaccac
     5761 cccgatcagc gcagtggaca ccggcgggtc gctcaccgat cgactcgcct cgctcggggc
     5821 ccaagcgctc atcgaggcgc tggtcatgct gcagcggggt gagctccggc cggtgccgca
     5881 ggatgccgcc cgggccacac tggcgcccaa gatcgaccac gacaccgccc gcatccgctg
     5941 ggaagagggc gccgacgccg cggcgcggcg gatccgcgcc ttcgatccgg tgccgggcgc
     6001 ctggaccgtg ctggacggcc tggaagtgaa gtgcttcggg cccagcatcc tgccccagcc
     6061 ggccgagccg ggactggtgg tcggaaccga gccgatgctc atcatcggtg ccgggccggg
     6121 ctcggtcgcc gtggcgcagg tgcagccagc ggggaagcgg cggatgcccg catcggagtg
     6181 gagccggggc cggggtgccc gggccggcca gcggtttgca tgaggcccct gccccggctt
     6241 ctggccttca ccgatggctc cgtgagaacc tcgcaccacc tgggcgcctc ggccgccgcg
     6301 atcgcctcac tgggcccggc cgtggcactg gtggcgcgtg atcccgcggc ctccgcttcc
     6361 gatctcagca ccttcaccgt gcggctgctt gccatcgccc atcccgccga ggccgcggtc
     6421 atcgtctccg cccgacccga tatcgccgcc agcctaggcg ctgacggggt ccagctccgg
     6481 gcgggcgatc tcgcgccagg cgatgcccgc caagtgctgc cgacgggctg gatcggccgc
     6541 tcggtgcata ccgcctccga ggccgtggac gccgtggccg cgggggcgga ttatctggtc
     6601 gccggcaaca tctggcagac cccgacccat ccggatcggc ccggcatcgg cctcgggctg
     6661 atcgagaccc tggcgtcgtt aggcaggccg gtgatcgcga tcggtggaat cacggcggac
     6721 cgggcccggg aggtgcacgc cgccggcggg tacggcatcg cggcgatccg ggccctctgg
     6781 tccgcccgag atccggccgc ggccgctgcg gcgttgctgg aagcctggac aactagtact
     6841 gagtactgag tactgagtac ttggcagtgt aagtttcccc catggacctc agcatcaccg
     6901 tcaacggcca gctccggtcg gtgcccggcc ccgcgaccct ggccgatctc ctggcccacc
     6961 tgtcgctcga tccggcgcag gtggtggtgg agctcaatcg tcagatcgtg cgccggcccc
     7021 ggctcccgga ggtcaccctc aagccgggcg ataccgtgga gctggtgcac ttcgtgggag
     7081 ggggttgaag catggacacg ccgttcagca tcgcgggacg ggcgttccgg tcccggctga
     7141 tggtcggcac cgggaagtac cgcagcaacg aagagatggt cgcggccatc gaggcttccg
     7201 gggcggaagt cgtcacggtc gcggtgcgcc gggtggacct cgaccggtcc aaggaagcgg
     7261 gcgtcctcta ccacctcgac ccggagacct ggttcctgct ggccaacacc gccggctgct
     7321 attcggccga cgaagccatc cggtacgccc ggctggcgcg cgaggcggga ttcaacgagt
     7381 tcatcaagct ggaagtgatc ggcgacaagg aaaccctgct gccggacgtt gccggcctga
     7441 tcgaagcaac cggggtcctg gccaaggaag gcttcgccgt cctggcctac accaacgatg
     7501 acctgatcag cgcgctccgg ctggaggatg ccggcgccgc ggcgg
//
LOCUS       DASWKS010000055         2847 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3349870, whole genome shotgun sequence.
ACCESSION   DASWKS010000055 DASWKS010000000
VERSION     DASWKS010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3349870"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VGA78_01835"
     CDS             complement(<1..446)
                     /locus_tag="VGA78_01835"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX9892627.1"
                     /translation="MLQVDVRTLRQGSTPIEATVAPNDPMFAGLGIELMEPVRISGTL
                     QSAGEGSFRLEGRAVGKARGECRRCLTEVTLLFDVEFDAVFTTSLDLVDDPGVYRLTE
                     PVTRINLTEAVREEVGFAVPTWALCRDACAGLCPRCGADLNQGPCG"
     gene            complement(613..1044)
                     /gene="ndk"
                     /locus_tag="VGA78_01840"
     CDS             complement(613..1044)
                     /gene="ndk"
                     /locus_tag="VGA78_01840"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX9892628.1"
                     /translation="MGGRFTLGIVKPDAVETGKMGSILAHLEMAGYRIRAARLVRLTR
                     PEAEAFYAIHRERGFYPDLVAFMTSGPCLPVALEKEDAVTGFRATIGATDPAEAAPGT
                     IRKLFAESKGRNAVHGSDSDENAAREIAFFFSESERAALGF"
     gene            complement(1065..1940)
                     /gene="sucD"
                     /locus_tag="VGA78_01845"
     CDS             complement(1065..1940)
                     /gene="sucD"
                     /locus_tag="VGA78_01845"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX9892629.1"
                     /translation="MSIFINRGTRLLVQGITGRDGSFHSRQMLEYGTQVVAGVTPGKG
                     GQRFEGSVPIFNTVADAVAATNADCSVIYVPPALAAGAIYEAADAGIGLIVCITEGIP
                     TVDMMKVMPFVREKRARLLGPNCPGLISPGQAKVGIIPGSICAAGRVGLVSRSGTLTY
                     EVVNHLTCNGIGQSTCVGIGGDPIIGTSFIDVLGAFQDDPETDAIVMMGEIGGIDEQK
                     AASFVRARVTKPVVGFIAGQTAPPGRRMGHAGAIISGSSGTAAEKMAAFRDNGIAVME
                     RPADVVHLVRQALGE"
     gene            complement(1937..>2847)
                     /gene="sucC"
                     /locus_tag="VGA78_01850"
     CDS             complement(1937..>2847)
                     /gene="sucC"
                     /locus_tag="VGA78_01850"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX9892630.1"
                     /translation="MNIKGLTVTRVLVVPAADIATEAYMGMIIDRESQRPVLMVSPAG
                     GIDIEEVAAKTPEKIYRLAIDPRYGLLPHQALGLGFKLYPEFPQVRAAARIMEQLYTV
                     FMANGATLAEINPLATTPDGKVLALDAKISVDDNELERRPDLASLRDETAEAPAEVEA
                     RRAGLTFIKLDGNVGCVVNGAGLAMATMDLVKYYGGEPANFLDIGGSSNPEKVVNALR
                     IITRDPAVKAILFNIFGGITRTDDVANGIKAALAQFPVQVPIVVRLTGTNEAVAVRIL
                     QEIGMTALSAMDEAVQKVVALAQEAA"
BASE COUNT          458 a          990 c          898 g          501 t
ORIGIN      
        1 cagccgcagg gcccctggtt caaatcggcc ccgcaacggg gacagagtcc ggcgcatgca
       61 tcgcggcaca gggcccaggt cggcacggca aacccgacct cttcccgcac cgcctcggtg
      121 agattaatcc gggtgaccgg ctcggtcagc cggtacactc ccggatcgtc caccagatcc
      181 agcgacgtcg tgaagaccgc gtcgaactcg acgtcaaaca gcagcgtgac ctcggtcagg
      241 cagcgacgac actcgccgcg cgccttcccc accgcccggc cttccagccg aaagctccct
      301 tcgcccgccg actgcagtgt gccgctgatc cggaccggtt ccatgagctc gatgccgagc
      361 cccgcgaaca tcgggtcatt cggagcgacc gtcgcctcga tcggagtgga tccctgacgg
      421 agggtgcgga cgtcgacttg gagcatagcc cctaactcta atggggttag agacttacat
      481 caaggtacca tcctcgtcga aggggtcgaa ggcggtcgaa gatagtcgaa gctggcaggg
      541 ccgagggcgc agtttggagg aaaccgtctt cgactgcctt cgacccgctt cgaccagctt
      601 cgaccggttt gactagaacc ccaacgccgc ccgctcggat tccgaaaaga agaaggcgat
      661 ctcccgggcc gcattctcgt cgctgtccga cccgtgcacc gcgtttcgtc ccttggactc
      721 cgcaaacagc ttccggatgg tgccgggcgc ggcctcggcg ggatcggtcg ccccgatggt
      781 ggcgcgaaag ccggtgacgg catcctcctt ttccagcgcc accgggagac agggaccact
      841 ggtcatgaag gcgaccaggt cggggtagaa gccccgttcc cggtggatgg cgtagaacgc
      901 ttccgcttcc ggccgggtca gccggaccag tcgggctgcg cgaatccggt agccggccat
      961 ttccaggtgg gccaggatgg agcccatctt gccggtttcc accgcatcgg gtttgacgat
     1021 gccgagcgtg aatcttcccc ccatggacgc tcccgttctc cgagtcactc gcccaatgcc
     1081 tgacggacca ggtgcaccac atccgcgggg cgctccatca ccgcgattcc gttatcgcgg
     1141 aaggcggcca tcttctcggc ggcggtgccg gatgagcccg agatgatcgc ccccgcgtgg
     1201 cccatgcgac gacccggtgg cgcggtctgt ccggcgatga aacccaccac cggcttggtc
     1261 acgcgggctc ggacgaagga ggccgccttc tgctcgtcga tgccgccgat ttcgcccatc
     1321 atcacgatgg cgtcggtctc gggatcgtcc tggaaggccc ccagcacgtc gatgaaactg
     1381 gtgccgatga tcgggtcgcc cccgatcccg acgcaggtgc tttgcccgat tccgttgcag
     1441 gtcagatggt tcaccacttc ataggtgagc gtgccgctgc gcgacaccag tcccacccgg
     1501 ccggcggcac agatggatcc aggaatgatc cccaccttgg cctgcccggg tgagatcagc
     1561 ccggggcagt tggggccgag cagccgggcc cgtttctccc gcacgaaggg catgaccttc
     1621 atcatgtcga ccgtggggat cccctcggtg atgcagacga tcaagccgat cccggcgtcg
     1681 gccgcctcgt agatggcccc ggccgcaagt gccggcggca catagatcac gctgcaatcg
     1741 gcgttggtgg ccgccaccgc gtcggccacg gtgttgaaga tcggcaccga gccttcgaat
     1801 ctctgaccgc cttttcccgg cgtcacgccc gcgacgacct gggtgccgta ctccagcatc
     1861 tgccgggagt ggaacgaccc gtcgcggccg gtgatgccct gcaccagcag ccgggtgccg
     1921 cggttgatga agatgctcac gcggcctcct gggccagcgc caccaccttc tgcaccgcct
     1981 cgtccatggc gctgagcgcg gtcatcccga tctcctgcag aatcctgacc gccaccgctt
     2041 cgttggtccc ggtcaaccgc accacgatgg gaacctggac cgggaactgc gccagggccg
     2101 ctttgatccc gttggcgacg tcgtcggtcc gggtgatgcc cccgaagatg ttgaacagga
     2161 tcgcctttac cgcgggatcc cgggtgatga tccgcagcgc gttcaccacc ttctcgggat
     2221 tggagctgcc cccgatgtcg aggaagttgg ccggctcgcc cccgtagtac ttgaccaggt
     2281 ccatggtcgc catcgccagc ccggcgccat tcaccacgca tcccacgttg ccatcgagct
     2341 tgatgaaggt caggccggcc cggcgggctt cgacctcggc cggcgcctcg gcggtctcgt
     2401 cccggagcga ggccaggtcg ggccggcgct ccagctcgtt atcgtccacc gagatcttgg
     2461 cgtccagcgc caggactttg ccgtccggtg tggtggcgag cggattgatc tccgccaggg
     2521 tggcgccgtt ggccatgaac acggtgtaga gctgctccat gatccgggcc gcggctcgca
     2581 cctgcgggaa ctcggggtac agcttgaatc ccaggcctaa cgcctgatgg ggcagcagcc
     2641 cgtagcgggg gtcgatcgcc agccggtaga tcttctccgg ggtcttggcc gcaacttctt
     2701 cgatgtcgat cccccccgcg gggcttacca taagcaccgg ccgctggctt tcgcggtcga
     2761 tgatcatgcc catgtacgct tcggttgcga tgtccgccgc cggcaccacc agcacccgcg
     2821 tcaccgtgag gcccttgatg ttcattc
//
LOCUS       DASWKS010000056         4354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2607123, whole genome shotgun sequence.
ACCESSION   DASWKS010000056 DASWKS010000000
VERSION     DASWKS010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4354
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2607123"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..864)
                     /locus_tag="VGA78_01855"
     CDS             complement(<1..864)
                     /locus_tag="VGA78_01855"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX9892631.1"
                     /translation="MRSRSQSTTLLIVAAFATVYVVWGSTYWAIKVALDSFPPFALGA
                     IRYLIAAGLMLGVLAATGTARPTREHWKAAAITGTLLLLLGNGAVIFAEQRAPTGLVA
                     LIVASAPLWIVLFDWLRPTGIRPERMVFAGLGAGTLGILLLVDPSGSVGSGVPLRETG
                     LLLVGAMAWSAGSLWSRHSKVTGSAMVLVALQMLVAGILFSGLSFATGELGRLAPARV
                     TLESVLALGYLILFGSIIAFTAYVWLMRVASPAAVSTYAYVNPVVALTIGTAIGGELL
                     TPRTMVAAAVLL"
     gene            1040..1510
                     /locus_tag="VGA78_01860"
     CDS             1040..1510
                     /locus_tag="VGA78_01860"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX9892632.1"
                     /translation="MVGTIDDIDHRILGILQDNARISNADIAREVGMAPSATLERVRK
                     LEERGLLKGYEARLDHNLLGRGLTAFIFVRSNEMPVGEGAAKALAAIEEVLEVHHVAG
                     EDCFLVKVRAADTRDLHRLIRERLGAIPQVTSTRTTIVLETVKETLKLSLNGAG"
     gene            1655..2056
                     /locus_tag="VGA78_01865"
     CDS             1655..2056
                     /locus_tag="VGA78_01865"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX9892633.1"
                     /translation="MAGVALIGEQLTHSVIGAFFEVYNVLGFGFLEHLYVMALERELR
                     ARGHHVAREVAIPVCYKGETLGTQRIDMIVDDKLVVETKSTYTLHKAAARQVYNYLRA
                     TRLEVGLLLHSGPEPSFYRLIHRKGVIRQIR"
     gene            complement(2104..3432)
                     /locus_tag="VGA78_01870"
     CDS             complement(2104..3432)
                     /locus_tag="VGA78_01870"
                     /inference="COORDINATES: protein motif:HMM:NF004426.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl ornithine aminotransferase family
                     protein"
                     /protein_id="HEX9892634.1"
                     /translation="MKDYPRIVVGPPGPKARAIVERDQRYTSTCYLKEYPLAIASGRG
                     AMVEDVDGNRFLDFMAGIAVSSTGYNHPRVVAAIQEQAGKFLHICGSDFYFEGMAALA
                     ERLANLAPGPAPKRVFLTNSGTEATEGAIKLARYATGRTALVAFKGAFHGRSTGSLAL
                     TSSKARQRAGMGPLLPDVHHVFYGYCYRCEFGKTYPSCDIFCVDHIERDLFGRHLDPT
                     EVAAVFVEPVQGEGGYIVPPTGWMQRLRELCTRHGILLVADEVQSGIGRTGKMWAIDH
                     TGVVPDMVLTAKGLGSGMPIGAIIATEEVTTWKKGAHGSTFGGNPVCVAAALATLDLI
                     EGGLMENARVMGDRLMAGVRKLAEKYPAVGDVRGLGLMIGMEFVKDRASRTRNPELVE
                     KLVQRAFGRGLLLLGAGPSALRFAPPLVVDDYDVDTGLQIIDEILASLTD"
     gene            complement(3429..4211)
                     /locus_tag="VGA78_01875"
     CDS             complement(3429..4211)
                     /locus_tag="VGA78_01875"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX9892635.1"
                     /translation="MTLLSQLVDALNGGRIRMVDLTQPLGPETPVIGLPPQFGSSPGV
                     TLELISRFDDKGPAWYWNIIRMGEHTGTHFDAPVHWITGKDLPDNTCATIPARRFVGP
                     ACVIDVTAEVLTNPDFLLLPEHITAWEKQHGPIPAGAWVLLRTGWSRRRDPAAFLNVA
                     EDGPHSPGFHRSASELLANDRDVLGVGVETVGTDAGQAGRFDPPFPNHATMHGAGKFG
                     LASLCNLDQLPATGAVVIAAPLKITGGSGSPLRVLALVEGSA"
BASE COUNT          791 a         1443 c         1405 g          715 t
ORIGIN      
        1 caggagcacc gccgccgcga ccatggtgcg gggcgtgagc agctcgccgc cgatcgcggt
       61 gccgatggtg agcgcgacca ccgggttcac atacgcataa gtcgagacgg ccgccggact
      121 cgccacacgc atcaaccata cgtaggccgt gaaggcgatg atcgagccga acaggatcaa
      181 gtaccccagc gcgagtaccg actccagggt cactcgcgcg ggcgcgagtc gccccagctc
      241 accggtggcg aaagagaggc cgctgaagag gattcccgcc accagcatct gcagcgccac
      301 cagcaccatg gccgagccgg tgaccttgga gtgccgcgac cacagcgaac cggcggacca
      361 cgccattgcg ccgaccagaa gcagcccggt ttcacgcagg ggaacgccgg agccgaccga
      421 gccgctcggg tcgaccagga gaaggatgcc gagcgtgccc gcccccagcc cggcgaatac
      481 catgcgctcg ggccgaatcc cggtcggccg gagccaatcg aacaacacga tccagagtgg
      541 ggcgctcgct acgatcaggg ccaccagtcc ggtcggtgcc cgctgctcgg cgaaaatcac
      601 cgcgccgttt cccagcaaca acagcaacgt cccggtgatc gcggccgcct tccagtgctc
      661 ccgggtgggc cgcgcggtac cggtcgcggc gagcacgccc agcatcagtc cagcggcgat
      721 gaggtaacgg atggccccca gcgcaaaggg cggaaacgaa tcgagcgcca ccttgatggc
      781 ccaataggtg gagccccaga cgacgtacac ggtcgcgaag gcagcgacga tgagaagggt
      841 ggtggattgc gaccgactgc gcatgatgtt ctccccgaca gcgacggacc ggccgatcgt
      901 tcgatgacga ccggcccagg gcgaacgata ggtgacaagc ctcggcctgt caagaacaat
      961 gttcttgcgc agagtaacat ttcagactat tgtactgcat gcgcacgtaa cgaacgtgcg
     1021 acgttcggtg gaggctagca tggtgggaac gatcgacgat atcgaccatc ggatcctcgg
     1081 cattctgcag gacaatgccc gaatctccaa cgcggatatc gcgcgcgagg tcggcatggc
     1141 gccctccgcc acgctggagc gggtccggaa gctggaggag cgaggcctgc tcaagggcta
     1201 cgaggctcgg ctggatcaca atctgttggg ccggggactg accgccttca tcttcgtgcg
     1261 atccaacgaa atgccggtgg gagaaggcgc cgccaaggcg ctggccgcca tcgaggaagt
     1321 gctggaggtg caccacgtcg ccggggaaga ctgcttcctg gtgaaggtcc gcgcggccga
     1381 cacccgcgat ctccaccggc tgatccgcga gcgcctcggc gcgatccccc aggtgacgtc
     1441 cacccggacc accatcgtgc tggagaccgt taaagagact ctgaaactat cgctgaacgg
     1501 ggctggctga ccgctttttc tggcaggctc ttaggaatca gggtcagccg gatacttcgg
     1561 atgggacgga tcaggcggat cagccctgca gcattatgat ggcaccggcg tctctattgg
     1621 tttcacaaac ctccgtccta atgcgtcttg gagaatggct ggcgtcgcgc tgatcgggga
     1681 gcagctgaca cattcggtca tcggcgcctt cttcgaggtg tacaacgttc tcggctttgg
     1741 gtttctggaa catctgtatg tgatggcgct cgagcgtgag ctgcgagccc ggggccatca
     1801 cgtggccagg gaggtggcga tcccggtctg ctacaaaggc gagacgctcg gaacccagcg
     1861 aatcgacatg atcgtcgacg acaagctggt ggtggaaacc aaatcgacct acacccttca
     1921 caaagccgcc gcacgccaag tctacaacta cctccgcgct acccgcttag aggttggatt
     1981 gcttttgcat tctggtcctg agccaagctt ctaccgtttg attcatcgaa aaggagtgat
     2041 ccgccagatc cgttgaatcc gaagtatccg gctgaaccct cggtccttga tgcccgccag
     2101 agttcagtcc gtcagtgagg ccaggatttc atcgatgatc tgcagtcccg tatcgacgtc
     2161 gtagtcgtcc accaccagcg gcggcgcgaa acgcagtgcg ctgggtccgg cgccgagcag
     2221 caacagcccc cgcccgaagg cccgctgcac cagcttctcg accagctcgg ggttgcgggt
     2281 ccgcgaggcc cgatccttca cgaattccat tccgatcatc aggcccaggc cgcgcacatc
     2341 gccgaccgcg gggtacttct cggccagctt ccgcaccccg gccatcaggc gatcgcccat
     2401 cacccgggcg ttctccatca acccaccctc gatcaggtcg agggttgcga gcgcggccgc
     2461 cacgcacacc ggattgccgc cgaaggtcga gccatgcgcg cccttcttcc aggtggtgac
     2521 ttcctcggtg gcgatgatcg ccccgatcgg catgccgctg ccgagccctt tggccgtcag
     2581 gaccatgtcg gggacgacgc cggtatggtc gatggcccac atctttccgg tccggccgat
     2641 gccgctctgg acttcgtcgg cgaccagcag aatcccgtgt cgggtgcaga gctcgcgcag
     2701 ccgctgcatc cagccggtcg gcggcacgat gtagccgcct tcgccctgga ccggctccac
     2761 gaatacggcc gcgacctcgg tggggtcgag atggcggccg aacaggtcac gctcgatatg
     2821 gtcgacgcag aagatgtcgc aggaggggta ggtcttcccg aactcgcagc gatagcagta
     2881 gccgtagaag acgtgatgga cgtcgggaag taacggcccc atccccgccc gctggcgcgc
     2941 cttgctcgag gtcagcgcca gtgagccggt gctccggccg tggaaagccc ccttgaacgc
     3001 caccagggct gtgcgcccgg tcgcatagcg ggccagtttg atggcccctt cggtcgcctc
     3061 ggttcccgaa ttggtgagga agacccgctt cggggccggt cctggcgcca ggttcgccag
     3121 ccgttcggcc agcgcggcca ttccttcgaa gtagaagtcc gacccgcaga tatgcaggaa
     3181 cttccccgct tgctcctgga tggcggcgac cactctgggg tggttgtacc cggtggatga
     3241 cacggcgatg cccgccatga aatcgagaaa ccggttgccg tccacatcct cgaccatcgc
     3301 cccccggccg ctcgcgatgg cgagcggata ctccttgaga tagcaggtcg aggtgtagcg
     3361 ctggtcgcgc tcgacgatgg cgcgagcctt cgggccgggg ggccccacga cgatgcgagg
     3421 atagtctttc atgcggatcc ttccaccagc gcgagcaccc gtaacggact gccgcttccg
     3481 ccggtgatct tgagcggggc cgcgatcacc acggcgccgg tcgccggcaa ctgatccagg
     3541 ttgcacaggc tcgcgagccc gaacttgccc gcgccgtgca tggtagcgtg gttggggaag
     3601 ggcgggtcga accggcccgc ctgcccggcg tcggttccca ccgtttcgac ccccacgccc
     3661 agaacgtcgc gatcattcgc caggagctcc gacgcgctcc gatgaaagcc cggcgagtgc
     3721 ggaccatcct ccgccacatt cagaaacgcc gctgggtccc gccgccggct ccagccggtg
     3781 cgaagcagca cccacgcgcc ggccgggatc gggccgtgct gcttctccca cgcggtgatg
     3841 tgctccggga gcagcagaaa gtccgggttc gtcagcacct cggcggtcac gtcgatcacg
     3901 caggccggtc cgacgaaccg gcgagccgga atagtggcac aggtgttgtc gggcagatcc
     3961 ttccccgtga tccagtggac cggggcgtcg aaatgggttc cggtgtgttc gcccatgcgg
     4021 atgatgttcc agtaccaggc cggtcccttg tcgtcgaagc gggagatcag ctccagcgtc
     4081 acaccgggcg acgatccgaa ctggggcggc aggccgatca ccggtgtctc ggggccgagc
     4141 ggctgggtca ggtccaccat ccggatccgg cccccgttca aggcgtcgac cagctggctc
     4201 agcaacgtca tgactatccc tggggttgga cgccgcgcag gtggcgctgg aactggaagc
     4261 gattctccag catcggcaga tcggtgatgt accccgacgg gcccaccgcc tcgaccttgg
     4321 ccaccagcgt ggtcgtctct tccgccgcct gggc
//
LOCUS       DASWKS010000057         3215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1875917, whole genome shotgun sequence.
ACCESSION   DASWKS010000057 DASWKS010000000
VERSION     DASWKS010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875917"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1682)
                     /locus_tag="VGA78_01880"
     CDS             complement(<1..1682)
                     /locus_tag="VGA78_01880"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEX9892636.1"
                     /translation="MNQLRRLRPRKRSNGLIPRLTLAGWCLLTACQEVAEPVWHAEAG
                     YRWRELRIAAGQPGFTRMGPRTGIRFENRVSDSVLLGNRILGQGGGVALGDVDGDGLV
                     DVFLARTEGPNALYRNLGGWRFEDVSDRAGVAAADRYSTGAAFADVDGDTDLDLVLLA
                     TTGPNTLFLNDGRGRFSEHRLDTLPRGSTTPALADVDGDGDLDLYVANYKPVSVPDVI
                     PPQRRAFDQVVSQVAPGRFEVTPAYREHFRLVTPPGMGGTYLTIRAEPDQFYLNQGGR
                     FSLVPLPSERFLDRTGRSAPADESFGLDARFADLNGDLAPDLYVANDFEDPDRFWLND
                     GRGGFRLADWTVQRQTSNSGMGLDVGDINADGLPDLFEVDMLSSDSRRLKTQMPTHTA
                     LPKQPGATETQLQQQRNTLFLNRGDGTFSEIAAFAGVQASGWSWATMFLDVDLDGWQD
                     LLVTTGHLWDVMDADTQERLQNRLSDVAWQRERWEYPSLPLANVAWRNRGDLTFEDAS
                     RTWRFGAEADISHAMAAADLDGDGDLDVVINRLGAPALVLRNDAPAPRIAVR"
     gene            complement(1679..2110)
                     /locus_tag="VGA78_01885"
     CDS             complement(1679..2110)
                     /locus_tag="VGA78_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892637.1"
                     /translation="MTWARGAVTMMTLAGIWPGGMPEALAQKRQRDLITREELVSSAQ
                     KSEDLYQAIRSLRPHFLLPPRGIRTLGAAPPEPTVLYVDGTKQGGLDGLKSILTMHVE
                     EVRYLEPSRAQHEYGFTHSGGAVIVKLAKFTKPPAKPDSGG"
     gene            complement(2444..>3215)
                     /locus_tag="VGA78_01890"
     CDS             complement(2444..>3215)
                     /locus_tag="VGA78_01890"
                     /inference="COORDINATES: protein motif:HMM:NF025702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4397 domain-containing protein"
                     /protein_id="HEX9892638.1"
                     /translation="FIHAVPDTGALDFRPVDIVENTTFYGIAFRSTGQAFYKNSRAGA
                     RHFKIFLTPDQNLPAEQQQAMAQTVVQDINVTLEAGHRYTFILWGYSRAGSSPAMQLT
                     ILDDNPGDPGSQVALRLVNAGAGLGAVDGFQYARGTATGTSCPGGGTPAETATWTGLA
                     ELTASAYVQTAPGTKCYRVTPAGSGTTLFADAMALAGAPPNTVTGHQALPGTTQAGSA
                     VSGFVVPRSVLGSKAPQTLTTPTIIFLWDRRPPNSEGF"
BASE COUNT          516 a         1051 c         1092 g          556 t
ORIGIN      
        1 aaccggaccg cgatccgggg ggcgggggcg tcgttccgca gtacgagcgc gggggcgccc
       61 aggcggttga tcaccacgtc cagatccccg tcgccgtcga gatcggcggc cgccatggcg
      121 tgggagatgt cggcctcggc gccgaagcgc caagtccggc tggcgtcctc gaaggtcagg
      181 tcgccccggt tgcgccaggc gacgttagcc agcgggagcg acgggtactc ccaccgctcc
      241 cgttgccagg cgacgtcgct caaccggttc tggagccgtt cctgggtatc cgcgtccatc
      301 acatcccaga ggtgacccgt cgtcaccagc aggtcctgcc acccgtccag gtccacgtcc
      361 aggaacatgg tggcccagga ccagccgctc gcctgcacgc cggcgaacgc ggcgatctca
      421 ctgaaggtcc cgtcgccccg attgagaaag agggtgttgc gctgttgctg gagctgggtc
      481 tccgtggcgc cgggttgctt gggcagcgcg gtgtgggtcg gcatctgggt cttgagccgg
      541 cgggagtcgc tgctcaacat gtcgacctcg aacagatcgg ggagtccgtc ggcgttgatg
      601 tcgccgacgt ccaggcccat gcccgaattg ctggtctgtc gctgtaccgt ccagtcggcg
      661 agccggaacc ccccgcgccc gtcgttgagc cagaaccggt cggggtcctc gaagtcgttg
      721 gcgacgtaga gatcgggggc gaggtccccg ttcagatcgg cgaaccgggc gtcgaggccg
      781 aacgattcgt cggccggcgc cgaccgtccg gtgcggtcga ggaaccgctc ggagggcagg
      841 ggcaccaggg aaaagcgtcc gccctggttg aggtagaact ggtccggctc ggcccggatg
      901 gtcaggtagg tgccacccat gcccggcggg gtcaccagcc tgaaatgctc gcgataggcc
      961 ggagtaacct cgaatcggcc cggggcaacc tgggacacca cctggtcgaa ggcgcggcgc
     1021 tggggcggga tgacgtccgg cacgctgacc ggcttgtagt tggcgacgta cagatcgaga
     1081 tcgccgtcac cgtccacgtc ggccagcgcg ggcgtggtgg accctctggg gagtgtatcg
     1141 aggcggtgct cgctgaagcg gccgcggccg tcgttgagga aaagggtgtt agggccggtg
     1201 gtggcgagga ggacaaggtc gaggtcggtg tcgccgtcca catcggcaaa cgccgctcct
     1261 gtggaatacc gatccgccgc cgcgacgccc gcccgatcgc tgacgtcttc gaaccgccag
     1321 ccgccgaggt tgcgatagag cgcgttaggc ccctcggtcc gcgccaggaa gacatccacc
     1381 agaccgtcgc cgtcgacatc acccagggcg acgccgccgc cctgtcccag aatgcggttc
     1441 cccagcagca ccgaatcgct tacccggttt tcgaagcgga tgccggtgcg tggccccatc
     1501 cgggtgaatc ccggctggcc ggcggcgatc ctcagttcgc gccagcggta tcccgcctcg
     1561 gcgtgccaca ccggttcggc gacctcctgg caagcggtga gcaggcacca cccagccagg
     1621 gtaagacggg ggatcaggcc gttggaccgc ttccgcgggc ggagtcgtcg cagttggttc
     1681 aaccgcctga gtcgggcttg gccggtggct tggtgaactt ggccagcttc acgatcaccg
     1741 ccccaccgct gtgggtaaac ccgtactcat gctgggctct gcttggttcc aggtaccgca
     1801 cctcctccac atgcatcgtc aggatcgact tgaggccatc cagcccaccc tgcttggtcc
     1861 cgtcgacgta gagcacggtc ggctccggag gagccgctcc gagagtccgg atgccccggg
     1921 gcggcaacag gaaatggggt ctcaggctcc ggatggcctg gtacaggtcc tcactcttct
     1981 gggccgacga caccagctct tctcgagtga tgaggtcgcg ctgtcgcttc tgggccagcg
     2041 cctccggcat tccgcccggc cagatgcccg ccagcgtcat catcgtcacc gcgccccgag
     2101 cccatgtcat ggttcgatcc tcacagtgcc taagatagtt tcccacggtc ttgcctttgc
     2161 tatcggcgta acctgctgat aggtcgtttt gttgacaaac aagcttgtcc gcagatggcg
     2221 cggatgccgc cgataaggtc ggtgctgttc gcgcgtcgcc taacacacac aacagcgttt
     2281 gaggtggcgt acaccgtctt atctgcgcaa tcggcgtaat ctgcggatag gttttttgtt
     2341 tgaacaacca ttcaccgggc cgtccgggtc ccggtcggaa aaagcgaggc cgccggggca
     2401 cctgcggccc ggcggcccac gtcgggacct gtgaaagccc gacctagaat ccttctgaat
     2461 tcggcggccg gcgatcccag aggaaaataa tggtcggggt cgtaagggtt tgcggtgcct
     2521 tgctccctag taccgaccgg gggaccacga agccgctcac agccgatcca gcctgagtgg
     2581 tgcccgggag cgcctggtgc ccggtcacgg tgttgggcgg ggcccctgcc agcgccatgg
     2641 cgtcggcgaa gagggtcgtt ccgctgccgg ctggagtcac ccgatagcac ttggtgcctg
     2701 gcgccgtttg gacgtaggct gaggcggtca actcggccaa accggtccag gtcgccgtct
     2761 cggccggcgt gccccctccc ggacacgaag tgccggtcgc tgtcccccgt gcgtactgga
     2821 agccatcaac cgcgcccagc cccgcgccgg cattgaccag ccggagcgca acctgactgc
     2881 ccggatcccc cgggttatcg tcgaggatag tgagctgcat agccggcgac gagcccgccc
     2941 gggaataccc ccacaggatg aaggtatagc ggtgtcccgc ctcgagcgtc acgttgatgt
     3001 cctgaaccac cgtctgcgcc atggcctgtt gctgctcggc cgggagattc tggtcgggag
     3061 tcaggaagat cttgaaatga cgcgctccgg cacgggagtt cttgtagaag gcctggcccg
     3121 tgctccggaa agcgatcccg tagaaggtcg tgttctccac gatgtccacc ggccggaaat
     3181 caagggcacc cgtgtcgggg acggcgtgga tgaag
//
LOCUS       DASWKS010000058         6842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1137335, whole genome shotgun sequence.
ACCESSION   DASWKS010000058 DASWKS010000000
VERSION     DASWKS010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6842
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137335"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1364)
                     /locus_tag="VGA78_01895"
     CDS             complement(<1..1364)
                     /locus_tag="VGA78_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX9892639.1"
                     /translation="MSDARSHRLGLLPQLLRQRILVLDGAMGTMIQAYRLGEADFRGE
                     RFGDWPVDLKGNSDLLCLTRPDIIRAIHEAYLEAGADIIEANSFTSTRIAQADYRMEG
                     LAAELNRAAAQVARAAADAWEARDPSRPRYVAGILGPTNRSGSLSPDVSNPGYRNVTF
                     EDLRAAYLEAATALIEGGADLLMVETIFDTLNAKAALFAIDEAAELTGIRLPVMISGT
                     IVDRSGRTLSGQTVEAFWYSVAHARPLAVGLNCALGVDLIAPFVQDLARVAPVLVSTH
                     PNAGLPNELGGYDDTPEYMARTLGDLAARGLLNLVGGCCGTTPAHIRALAKAVRGLAP
                     RVPPPVEHRCRLSGLEPLVLWPGSNFVNIGERTNVTGSRRFARLIKDAKYEDALAVAR
                     EQVESGAQLIDVNMDEGLLDSEQAMTTFLNLVAGEPSIAKVPVLVDSSKWSVIEAGLR
                     CIQG"
     regulatory      complement(1541..1614)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            1850..2731
                     /locus_tag="VGA78_01900"
     CDS             1850..2731
                     /locus_tag="VGA78_01900"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9892640.1"
                     /translation="MPDRPDHRQLPGQPVPIQYGSEGFRQVEVGPFRITDVRLSARDR
                     IEPHFHDRPNIGVMLEGSFDLAFRGRPSYCCDRGVVFIEPAGETHCNCMGCQGAWVLA
                     IQPDPVELENLLPRAGFLDAPSVRQAAPAGLLARRVARELRSPDAFSGLMIEGLAAEL
                     LALAGRTRAQVVRPSKTPGWLERVHKAVEDASPGRVTLSQLAQTAGVHVTHLNRQFRA
                     RYGKSAGRYLLEHRLEWAAAQLSGGTQPIAEIACLAGFADQSHFTRRFRDYTGLTPGR
                     YRSVARGARLLSMELQS"
     gene            complement(2722..3198)
                     /locus_tag="VGA78_01905"
     CDS             complement(2722..3198)
                     /locus_tag="VGA78_01905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892641.1"
                     /translation="MGNDGIQVTGGGLLVHPSLGPFTFSVSAIKQADGTVGGRWEYHY
                     FFAGDLKFKGDVTCFEVDAVNRRAWIGAVITFSNDPEQVTNPIFGPGHDAWFRKLDNG
                     NGQAEVDRITVVGFEGSAGIETSEEHCQIQIWPGPPLDAVNARTWPIESGGVTIHD"
     gene            complement(3245..3565)
                     /locus_tag="VGA78_01910"
     CDS             complement(3245..3565)
                     /locus_tag="VGA78_01910"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HEX9892642.1"
                     /translation="MPAGTSAPGPISPLPDGVRLRVHVQPRASRTEVVGLHGDSIKIR
                     LAAPPVEGAANAELIRFLAAELGVPARSVILERGLGSRQKTVRITGVTADQATQVLSP
                     AKST"
     gene            complement(3626..4207)
                     /locus_tag="VGA78_01915"
     CDS             complement(3626..4207)
                     /locus_tag="VGA78_01915"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX9892643.1"
                     /translation="MGGIALTIDLILRGIVIAAFTATGLVALTHWMVQEQRIAPFGPW
                     VNGVRRASDPVLRPLERMLVRQGRNPQEGSFWLLAIVVVGGIVLITVGRWLTRTLLTM
                     TALTQAGPFGWLRFIVELAFNLLLLAIVVRVIGSWLSIGRYRRWMRPFFYATDWLVEP
                     IRRRLPPLGMIDLSPLLAYVVILFARAIVLALL"
     gene            complement(4210..4617)
                     /locus_tag="VGA78_01920"
     CDS             complement(4210..4617)
                     /locus_tag="VGA78_01920"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9892644.1"
                     /translation="MRDGEDFAAWLSDLTTNDPDTYAALSDHHLVLTDEVGDWIGGIR
                     FTMRGGVATVIDVGVVPSERGQGHALRLLEGFEQYAVDDGAHMIEFWTDQLSIEPLLA
                     ALGWRRVATRSDYVGGRTWHLLEKRLPSAEHPA"
     gene            complement(4709..4984)
                     /locus_tag="VGA78_01925"
     CDS             complement(4709..4984)
                     /locus_tag="VGA78_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892645.1"
                     /translation="MSSSRNKIITLLVVLGFIAFLAWSTLQSQGVECQVCVQFNGRDN
                     CASASGPGDAEAAETAHNTACGPVTYGMDDAIACNNKPPASKTCRRR"
     gene            complement(5009..5413)
                     /gene="cutA"
                     /locus_tag="VGA78_01930"
     CDS             complement(5009..5413)
                     /gene="cutA"
                     /locus_tag="VGA78_01930"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEX9892646.1"
                     /translation="MEKGHHADQRRGPGRSDFRSAREALTSDLEAAVIVTTTLGDETA
                     ALGLARAVVEERLAACVHLTPITSVYRWQGKVEEAREWSCQMKTTPDRTARLLERVRA
                     FHPYQVPEILVLPVAGGDPSYLRWLAQSVRDS"
     gene            complement(5338..5721)
                     /locus_tag="VGA78_01935"
     CDS             complement(5338..5721)
                     /locus_tag="VGA78_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892647.1"
                     /translation="MMRVLGPLGLAMLLWGCRTYDRYSRVVDQDGMVPAEVFAKFGAE
                     QAQAIAIGRALGVGFTGTDDGALARQVQEAASYAKRLPAVVDVQADTAAFILTVTFKS
                     GWRKAITPISDGVPADQTSGLPARR"
     gene            5785..6750
                     /locus_tag="VGA78_01940"
     CDS             5785..6750
                     /locus_tag="VGA78_01940"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9892648.1"
                     /translation="MTGRTGRRTVGRSVGCCLTFSLLASGTSGQAPSGPLVVFNAGSL
                     AAPFRDLLQEFRRRNPAVQPRQESSGSLEAARKLTELGRIPDVIGVADSVVIPSMLFP
                     SHATWYATFARNAMTLVYSARSDGAGEITGVNWWRILLRPGIRTGRSDPALDPNGYRT
                     LLVTQLAERHYQQPGLAGRLLAAMPPRYMRPKEADLVALVQAGELDYAWSYRSIAATV
                     GLRSLTLPPQVDLSDPALGNWYAQASVRLPGSTRAAGDSVTVLGAPIVYALTIPTRAA
                     NRPAAEAFARFVFSPEGQAVLGRHGFLLMEHPVVGGPGRPPKFLP"
BASE COUNT         1144 a         2285 c         2274 g         1139 t
ORIGIN      
        1 ttgccctgga tgcagcggag cccggcctcg atgaccgacc atttcgagga atccaccagg
       61 accgggacct tggcgatgga gggctcgccg gccaccagat tcaggaaggt cgtcatggcc
      121 tgttccgaat cgagcaggcc ttcgtccatg ttcacgtcga tgagctgggc cccgctctcc
      181 acctgctccc gcgccaccgc gagcgcatcc tcgtatttcg cgtccttgat gagccgcgcg
      241 aagcggcgcg acccggtgac gttggtccgc tcgccgatgt tcacaaagtt gctgccgggc
      301 cacagcacca gcggctccag ccccgagagc cggcaacgat gctccaccgg gggagggacc
      361 cgcggcgcca ggccgcgcac cgccttagcc agggccctga tgtgggccgg ggtggtcccg
      421 caacagccgc cgacgaggtt gagcagcccg cgggcggcga gatcgcccag cgtccgggcc
      481 atgtactccg gcgtgtcgtc gtaaccgccc aattcgttag gcaggccggc attggggtgg
      541 gtgctcacca gcaccggcgc gacccgcgcc aggtcctgca cgaagggcgc gatcagatcg
      601 acgcccaggg cgcagttgag accgaccgcg agcggccggg cgtgggccac cgaataccag
      661 aaggcttcga ccgtctgtcc cgacagggtg cggccgctcc ggtccacgat ggtgcccgag
      721 atcatcaccg gcagcctgat cccggtcagc tcggccgcct catcgatggc gaagagcgcc
      781 gccttggcgt tcagggtgtc gaagatggtc tcgaccatca gcaggtcggc cccgccctcg
      841 atcagggccg tcgccgcctc caggtaggcc gcccgcagat cctcgaaggt gacgttgcga
      901 tagcccggat tggaaacgtc cggcgacagc gacccggacc ggttggtggg gcccagaatg
      961 ccggcgacgt agcgcggacg ggatggatcc cgcgcttccc aggcatcggc cgcggcccgc
     1021 gcgacctgag ccgccgcccg gttcagctcc gccgccagcc cctccatccg gtagtccgcc
     1081 tgcgcgatcc gggtgctggt gaaggagttg gcctcgatga tgtcggcgcc ggcttcgaga
     1141 taggcctcgt gaatcgcccg gatgatgtcc ggccgggtga ggcagagcag gtcgctgttg
     1201 cctttgagat ccaccggcca gtcaccgaat cgctcacccc gaaagtcggc ttcacccaga
     1261 cgataggcct ggatcatggt gcccatggcc ccgtccagca ccaggatgcg ctggcggagc
     1321 aattggggaa ggagcccaag gcggtgggaa cgagcgtcgc tcatcttttc aggtcagagg
     1381 cggagtgaac cggagagtgc ccaatgccca gtgcccattg cagaaggagg cacttctggc
     1441 cgactggact ctgccctggg cattgggcac tgggctttct ccggttcatt cggtcctctc
     1501 acgtctcagg tcccaaaaag aaaaagtccc gaggccaaaa cggcctccgg gcggcgcgtt
     1561 ttagcgagtt gtttaacgtg gccgcaagca gcgcaaatca ccacgagctt caattatcct
     1621 gttgaattgt aacgggtggc tcatccgggc gggaggtctg ggtcggtcat ggattgctgg
     1681 gaggcccggg gggtgggggt caggcaatcc ggcccgtgtc catctgacac ggtttatcta
     1741 ccccgcatcc gccgttcgcg gagggggatt ccgcgcaact ttcgcccggt ccggggcttc
     1801 gctaaccagg accggaacgg cacacgtcct gcccctccgg ccggcctgca tgcccgaccg
     1861 acctgaccac cgacagctgc ctgggcagcc ggttcccatc cagtacggaa gcgaaggctt
     1921 ccggcaggtg gaggtcggcc cgtttcggat caccgatgtg cgactatcgg ctcgggaccg
     1981 gatcgaacct cactttcacg accggcccaa catcggggta atgctggagg gctctttcga
     2041 cctcgctttc cggggccgac cctcgtactg ctgcgaccgg ggcgtggtgt tcatcgagcc
     2101 ggccggggag acccactgca actgcatggg ctgccagggt gcctgggtgc tcgcgatcca
     2161 gcccgatccc gttgagctcg aaaacctgct gccccgggcc ggctttctgg acgctcccag
     2221 tgtgaggcaa gccgccccgg ctggcctgct ggcacgtcgg gtggcgcgcg agcttcgatc
     2281 gcccgatgcc ttcagcgggc tcatgatcga gggactcgcg gccgagctgc tggccctggc
     2341 cggcaggacc cgcgctcagg tcgttcggcc aagcaagact ccgggctggc tggagcgggt
     2401 gcacaaggcg gtggaggatg cctcgcccgg ccgcgtgacg ctgagccagc tggcacaaac
     2461 cgcgggggta catgtcaccc acctcaatcg ccagttccga gcccgttacg gcaaatccgc
     2521 cggccggtac ctgctggagc accggctgga atgggccgcc gcccagctga gcggtggaac
     2581 ccagcccatc gccgagattg cctgcctggc cggctttgcc gaccagagcc acttcacccg
     2641 ccggttccgc gactacaccg gcctcacccc gggccgatat cgcagcgtgg cccggggcgc
     2701 acgtctgctc agcatggaac ttcaatcgtg aatggtcacc ccgcctgact cgatgggcca
     2761 ggtccgcgca ttcaccgcat cgagtggggg cccgggccag atctgaatct ggcagtgttc
     2821 ctccgaggtt tcgatgccgg cggagccttc gaatcccacc accgtgatgc gatcgacctc
     2881 cgcctgcccg ttgccgttat ccagcttccg gaaccaggcg tcgtggcccg gtccgaagat
     2941 cgggttggtg acctgctccg gatcgttgct gaacgtgatc acggccccga tccaggcccg
     3001 ccggttcacg gcgtcgacct cgaagcaggt gacgtctcct ttgaacttca ggtccccagc
     3061 gaagaagtag tggtattccc agcggccgcc gaccgtgccg tcggcctgct tgatagcgct
     3121 cacggaaaag gtgaacggcc cgagcgaggg atgaaccagc aggccgcccc ccgtgacctg
     3181 gatgccatcg ttgcccactc cgatgacgcc gagggacagg cttgtggccc ggcctcggca
     3241 actgtcaggt ggacttggcg ggactgagta cctgggtggc ctggtcggcg gtgaccccgg
     3301 ttatccggac cgtcttctgc cgggagccga ggccccgctc gaggatgacc gaacgggctg
     3361 gaactccgag ttccgcggcg aggaaccgga tgagctccgc gttggccgct ccctcgaccg
     3421 gcggggccgc cagtcggatc ttgatcgaat cgccgtgcag ccccacgact tcagtccgcg
     3481 aggctcgggg ttgaacgtga acccggagac ggaccccatc gggtagcggc gaaatcgggc
     3541 cgggagcaga cgttcccgca ggcaagatcc ctcgctttgc tcgggatact ggaaaggggg
     3601 ctcgggatga ccgacgaagc ttggcttaca agagcgcgag cacgatagcc cgggcgaaca
     3661 ggatcaccac gtaagccagc agcggactca ggtcgatcat gccgagcgga ggaagccggc
     3721 gccgaatcgg ctccaccagc cagtcggtcg cgtagaagaa gggccgcatc caccggcggt
     3781 accggccgat gctgagccag ctgccgatga cccgtaccac gatcgccagc agcaggaggt
     3841 tgaaggccaa ttcaacgatg aagcggagcc agccgaaagg tccggcctgg gtcagggccg
     3901 tcatggtgag tagcgtgcgg gtgagccagc gccctacggt gatgagcaca atgccgccca
     3961 ccacgacgat ggccagcagc cagaacgatc cctcctgggg attgcgtccc tggcgtacca
     4021 gcatccgctc cagcggccgg aggaccgggt cgctggcccg ccggacgcca ttcacccagg
     4081 gaccgaaagg cgcgatccgc tgctcctgca ccatccagtg ggtgagcgcc accaagcccg
     4141 tggccgtgaa ggcggcaatc acgatgccgc gcagtatgag atcgatggtg agcgcgatgc
     4201 cgcccacggt caggcgggat gctccgcgga gggcaggcgc ttttccagca ggtgccaggt
     4261 cctgccgccg acatagtcgg accgggtggc cacccggcgc cagccgagcg cggcgagaag
     4321 gggttcgatc gaaagctggt ccgtccagaa ctcgatcatg tgggctccgt catccaccgc
     4381 atactgctcg aatccctcga gcagccgaag ggcatgcccc tgaccccgtt ccgacggcac
     4441 cacaccaacg tcgatgaccg tggcaacccc gccccgcatc gtgaacctga tgcccccgat
     4501 ccagtccccg acctcatcgg tgagtaccag atggtggtcc gacaaggcgg cataggtgtc
     4561 ggggtcgttg gtcgtgagat cggacagcca ggccgcgaag tcctcgccgt cgcgcatctc
     4621 gcgaattctc aggtcacggt caggttgcac catacccatt gggttcaact cccccatcct
     4681 gaacggggtt cccccgccga gcggggggtc agcggcgccg gcaggtcttg ctggccggcg
     4741 gcttgttatt gcaggcaatc gcatcgtcca tgccataggt cacaggcccg caggcggtgt
     4801 tgtgcgcggt ctcggccgcc tcggcgtccc cgggcccgga agcgctggcg caattatccc
     4861 taccgttaaa ctggacacag acttggcact cgacaccctg ggactggagg gtggaccaag
     4921 ccaggaaggc aatgaagccc agaacgacga gcagggtgat gatcttgttg cggctggagg
     4981 acatggacga ttgcggatgg acagagggtc aggaatcccg cacgctctgg gcgagccacc
     5041 ggagatagga ggggtcccct ccggccacag gcaggaccag aatctcgggg acttgatacg
     5101 gatggaacgc ccggacccgt tccagcagcc gggcggttcg gtccggagtc gtcttcatct
     5161 ggcagctcca ttccctggcc tcctccacct taccctgcca acggtacaca ctggtgatcg
     5221 gcgtcaagtg gacgcaggcc gccagccgct cctcgacgac ggcgcgggcg aggccaagtg
     5281 cagccgtttc gtcacccagg gtggttgtga cgatgaccgc cgcctcaaga tctgacgtca
     5341 gcgcctcgcg ggcagaccgg aagtctgatc ggccgggacc ccgtcgctga tcggcgtgat
     5401 ggcctttctc cagccgctct taaacgtaac cgtgagaatg aaggccgcgg tgtcggcttg
     5461 tacgtcgacg acggcgggga ggcgcttggc gtagctggcg gcctcctgga cctgacgcgc
     5521 caaggccccg tcgtccgtcc cggtgaaccc gacgccgagg gcccggccga tcgcgatggc
     5581 ctgggcctgc tcggcgccga atttcgcaaa gacctcggcg gggaccatgc cgtcctgatc
     5641 caccactcga gaatagcggt cgtaggtccg gcagccccaa agcaacatcg ccaggccgag
     5701 cgggcccagt actcgcatca tcgctctgtc cttggagagt tcggttctcg cgtcagaata
     5761 taccagtcga gttaggttat ttgcatgacg ggacggacgg gcaggcggac ggtcggacgg
     5821 tcggtgggct gctgcctcac cttttcgttg ctcgcttcgg gcacctccgg ccaggcgcca
     5881 tcggggcccc ttgtcgtatt caatgcgggg agtctggcgg cgccgtttcg ggatctgctg
     5941 caggagtttc gccgccggaa tcccgcggtg cagccgaggc aggagagctc tggcagcctg
     6001 gaggcggccc gcaaactcac cgagctgggc cggattcccg acgtgatcgg tgtcgccgac
     6061 tcggtggtca ttccctcgat gctgtttccg tcccacgcga cctggtacgc caccttcgcc
     6121 cgcaacgcga tgaccctggt gtattcggct cgctcggacg gggcgggtga gatcaccggc
     6181 gttaactggt ggcggatcct gcttcggccc gggatacgga ccggacggtc ggatccggcc
     6241 ctcgacccca atggctaccg gactctgctg gtaacccagt tggcggaacg ccactatcag
     6301 cagcctggcc tggccgggcg gctgctcgcg gcaatgccgc cgcgttacat gcgacccaaa
     6361 gaagctgatc tggttgcact ggtgcaggcc ggcgagctcg actacgcctg gtcctaccgg
     6421 tccatcgcgg ccaccgtggg tctcaggagt ctgacgctgc cgcctcaggt cgacctgagc
     6481 gatccggcac tgggaaactg gtacgcccag gcttcggtgc ggctcccggg ttccactcga
     6541 gctgcgggcg attcggtgac ggttctgggc gcaccgatcg tctacgccct gaccatcccc
     6601 acccgtgccg ccaaccggcc ggcggccgaa gcgtttgcgc ggttcgtctt ctcgcccgag
     6661 gggcaggcgg tgctcgggcg gcacgggttt ctgctgatgg aacatcccgt tgtcggtggg
     6721 ccgggccggc ctcccaagtt cctaccgtaa ctaactctaa aaggaagcag gaagcaggga
     6781 gcaggaagca ggatccagct tccccgctcc tgctccctgc tccctgctcc ctgctccctg
     6841 ct
//
LOCUS       DASWKS010000059         6068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2243784, whole genome shotgun sequence.
ACCESSION   DASWKS010000059 DASWKS010000000
VERSION     DASWKS010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2243784"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VGA78_01945"
     CDS             <1..748
                     /locus_tag="VGA78_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892649.1"
                     /translation="AGYTYSRVKDLITLGSSIAFSNYQFTVVEGSIENRSLSSSAFEV
                     PHNIFLSATADLPLAFYASVSYNGRSGRPYTYVVNGDGNADGITSNDALYVPRDAGDI
                     LLTNPADFDRLNTWLVAEDCILEQRGQVMKRNSCRNPFVHGINMRFGKRINTFRGQSM
                     EITADVFNLLNLINDDWGVIRSNFGQASEFEQRVAPIRVAGFDNRGTPETSDDRPRYS
                     VDALAQFPVRDQAVLNSSRWRMQLGLKYVF"
     gene            complement(904..1986)
                     /locus_tag="VGA78_01950"
     CDS             complement(904..1986)
                     /locus_tag="VGA78_01950"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX9892650.1"
                     /translation="MRLLDRYVLSSWIKIFVLTAVGFPLVQVLLNATDRVARLLDRNL
                     SAGTIALSYLYQLPESMSQMIPAATLFATVFTLGPLSRNSELTAVKAGGVSFHRILLP
                     LIFAAVFASGSSFLIGEFSTRASARALELQKERRASSISVRYNFVYRGDQGWIYAVRL
                     LDTQTQRMENVVFERAGTGDTNPTVSVVADSVVYVDTLPGRWRFLRGSTHYMGDSSQV
                     LATFQFRKARLKALTQQPRELLVEAKDPSEMDYQELGDYIETLRRSGNDVRKLKVEQA
                     IKVAVPVACFIIALFGGPLAMTAPRAGAAVGVAISLGTTVSYLMLINLTRAVGASGLM
                     NPTLAAWTPNILFFVVAIILLIKVRT"
     gene            complement(1990..3507)
                     /locus_tag="VGA78_01955"
     CDS             complement(1990..3507)
                     /locus_tag="VGA78_01955"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX9892651.1"
                     /translation="MRLLSRYLLGQLLAPFLFSLGALTGMLMLNQIAKRFGDLVGKGL
                     PADVITEVLLLFLPFIVALTLPMAVLVSVLYGFSHLAADNEITAMRATGVSVAQMLRP
                     VFAAGVLVAALNFLFIDQVLPRSNARLRTLQMDIGRKRPTLTMREQAVNQLPPTEYFI
                     RAGTIEPGTGRMRDVTIYDLTLPNARRIIYADSGAMMFEENARNLRLRLFRGEVHEYR
                     PEEEGTVRVTQFDVNTIRARDVANVLERSTEMAERGDRELSVCQMIDRRELSQEQAAR
                     ARDQREDLTRRDLRSILRQRPAEPRVFPEPGRRKHCGAWRRFEDALGRVIFPAAAEAQ
                     AQAPASPPQPLPPATPPDTATGARPYLAPVMLSSPSDVAEARGNQRSEVRSANSLGVE
                     IHKKFTISVSCFNFVVIGIALALRFPRGGMGLVLGGSMLIFTLFYVGMTAGEQLADRG
                     FLTPAAAMWAPNVLIGALGLLGLRAASRTTGTTRGGDLADLIDLMFGWLRRRRRA"
     gene            3603..4520
                     /locus_tag="VGA78_01960"
     CDS             3603..4520
                     /locus_tag="VGA78_01960"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX9892652.1"
                     /translation="MLIRPILLAFFLAGCQEKAPPAPEFDGDQALAYARTQVDFGPRI
                     PGTEGHLRMAGWLDSLLRTRADTVVVQAWDHVTADAKTLPMRNYIARFNPQATTRLLF
                     LAHWDTRPISDAAGASDSTAPVPGANDGASGVAVLLGMADALKRSPPGVGVDLLFVDG
                     EDYGDWDASGRPDVLIGSRYYAKNPVPGPQPRFAVLFDMVGDAMLQIPKESYSVTGAP
                     DVVDLVWSTAARLGYQTTFIDQQGIATTDDHIPLQEAGIKAIDLIDFDYGPNNSYWHT
                     PQDTFDKLSARSLKIVGDVAMAVIREARP"
     gene            4687..5289
                     /locus_tag="VGA78_01965"
     CDS             4687..5289
                     /locus_tag="VGA78_01965"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEX9892653.1"
                     /translation="MTKSERRVIIALLALAVAGQGVRLVFDRTAPPGEALLPPRQRAN
                     VAAQREASRAVGIPLQPGERLDPDRASAQELARLPGIGMRMAKEIVSDRELRGFFGSP
                     QGLLRVDGIGPATVGRLEPFLRFQTPQSGGTAPSSLPNLNTMTAADLDRLPGVGPSRA
                     RAILAYRDKNGPFADPRDLERVPGVGQRLAERLTRLVVVG"
     gene            5385..>6068
                     /locus_tag="VGA78_01970"
     CDS             5385..>6068
                     /locus_tag="VGA78_01970"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HEX9892654.1"
                     /translation="MTVTLHSTDRLGDLLLQEGLISSDQLRQALAEQRQSGHRLGYVL
                     VKQNILEEVEITKALARQLRMPAVDLSRFEPDPKLLRLIPADMARKHLVMPLRRDGRN
                     LTVAMADPSDLSLLQDLKFITRFDVFPVIAGEYTLRTLIDKYVENGDQQQLTDLLRDV
                     EESGDGLEVLQDQEEETATQAQINDAPVVKLINGILGEAVRRGASDIHIEPFEHEMRV
                     RYRIDGALQE"
BASE COUNT         1056 a         2018 c         1997 g          997 t
ORIGIN      
        1 ggccggctat acctacagcc gggtcaagga cttgatcacc ctggggtcgt ccatcgcctt
       61 ctccaactac cagttcacgg tagtggaagg ctcgatcgag aaccggagcc tctcgagctc
      121 cgccttcgaa gtaccccaca acatcttcct gagcgccacg gcggatctgc cgctcgcgtt
      181 ctatgcctcg gtgagctaca acgggcggtc ggggcggccc tacacttacg tggtgaacgg
      241 cgacggcaac gccgacggga ttacctccaa cgacgccctc tatgtccctc gcgatgcggg
      301 cgacatcctg ctgaccaacc cggccgattt cgaccggctc aacacctggc tggtagccga
      361 ggattgcatc ctggagcagc ggggccaggt gatgaagcgg aacagctgcc gcaacccctt
      421 cgtccacggc atcaacatgc ggttcggcaa gcggatcaac accttccgcg gccagtcgat
      481 ggagatcacc gccgacgtgt tcaacctgct caatctgatc aacgatgact ggggtgtgat
      541 ccgctccaac ttcggccagg cctccgagtt cgagcagcgg gtggctccca ttcgcgtggc
      601 gggcttcgac aaccgcggca cccccgagac ctccgacgac cggccccgct actcggtgga
      661 cgccctggcc caattcccgg tgcgggacca ggcggtgctg aacagctcgc gctggcggat
      721 gcagctggga ttgaagtacg tcttctgaac ggcggtcgaa gccgtcgaag ccgtcgaagc
      781 ggtcgaagca gtcgaaggag tcgaagatgg tcgaaaggcc tccggaaccg ggggcctttc
      841 gttactcaac cgccttcaac tccttcgact ccttcgactc cttcgacccc ttcgactgtt
      901 gttttaggta cggactttga tgagcaagat gatggcgacc acgaagaaga ggatgttggg
      961 cgtccacgcc gccagggtcg ggttcatcag cccgctggca ccgaccgccc gagtcaggtt
     1021 gatcagcatc aggtagctca ccgtggtccc gaggctgatg gcgacgccga ccgcggcccc
     1081 ggcccggggc gcggtcatgg ccaggggtcc gccgaagagg gcgatgatga agcacgccac
     1141 cggcaccgcg accttgatgg cctgctctac cttgagcttg cggacgtcgt tgccggaccg
     1201 ccgcagcgtt tcgatgtagt cccccagctc ctggtagtcc atctccgacg ggtccttcgc
     1261 ctccaccagc agttcgcgcg gctgctgagt cagggccttc agcctcgcct tgcgaaactg
     1321 gaacgtggcc agcacctggg acgaatcgcc catgtagtgg gtcgatccgc gcaggaagcg
     1381 ccaccgtccc ggcagggtat cgacgtagac cacgctgtcg gccacgacgg aaacggtggg
     1441 gttggtgtca ccggtgccgg cccgctcgaa taccacgttt tccattcgct gggtttgagt
     1501 atcgagcagc cggacggcgt agatccagcc ttgatcgccc cgatagacga agttgtaccg
     1561 caccgagatg ctgctggccc gccgctcctt ctgcagctcc agcgcccggg ccgaggcgcg
     1621 ggtggagaac tccccgatca ggaagctcga gcccgaggcg aacaccgccg cgaagatcag
     1681 cggcagcagg atccggtgga agctgacgcc gccggccttg acggcggtga gctccgagtt
     1741 gcgggacagc ggacccagcg tgaacaccgt cgcgaacaac gtcgcggcgg ggatcatctg
     1801 ggacatgctc tcgggcagct ggtacagata cgacagcgca atggtgccgg ccgagaggtt
     1861 tcggtccagc agccgagcca cccgatcggt ggcgttgagg agcacctgga ccagcgggaa
     1921 tccgaccgcg gtcagcacaa agatcttgat ccaggaggac aggacgtagc gatcgagcag
     1981 ccgcaccggt caggcccgcc gccgccgccg gagccagccg aacatcagat cgatgagatc
     2041 ggccaggtcg ccgccccggg tagtgccggt ggtccggctg gccgcccgca agcccagcag
     2101 ccccagcgcg ccgatcagca cgttcggagc ccacatggcg gcggcgggcg tgagaaaccc
     2161 ccggtcggcc agctgctcac ccgcggtcat tcccacgtag aacagggtga agatcaacat
     2221 gctgccgccc agcaccagcc ccatgccgcc ccgggggaat cgcagcgcca gcgcgatgcc
     2281 gatgaccacg aagttgaagc aggaaacgct gatcgtgaac ttcttgtgga tctcgacgcc
     2341 caggctgttg gcgctgcgca cttccgaccg ctggttgcct ctcgcctcgg cgacgtcgct
     2401 ggggctgctc agcatgaccg gggccaggta tggccgggcg ccggtcgctg tgtcgggtgg
     2461 ggtcgccggg ggaagcggtt gaggcggtga ggccggggcc tgcgcctggg cttcggccgc
     2521 ggcggggaag atcacccggc ccagcgcatc ctcgaaccgg cgccaggcgc cgcagtgctt
     2581 ccgccgcccc ggttccggga agacccgcgg ttccgccggg cgctgccgca ggatcgaacg
     2641 cagatcccgc cgggtcagat cttcccgctg gtcccgggcc cgggcggcct gttcctgcga
     2701 cagctcccgg cggtcgatca tctggcagac gctgagctcg cgatcgcccc gctccgccat
     2761 ctcggtgctt cgctccagga cgttggccac gtcgcgggct cggatcgtgt tgacgtcgaa
     2821 ctgggtgacg cggaccgtgc cctcctcctc ggggcggtac tcgtgcacct ctccccgaaa
     2881 cagccgcaac cggagattgc gggcgttctc ctcgaacatc atggcgccgc tgtcggcgta
     2941 gatgatgcgg cgcgcattgg gcagggtgag atcatagatc gttacgtccc gcatccgccc
     3001 ggttcccggt tcgatggtgc cggcccggat gaagtactcg gtgggtggca gttgattgac
     3061 ggcctgctcc cgcatagtga gcgtgggccg tttgcgcccg atgtccatct gcagggtccg
     3121 gagccgggcg ttgctgcgcg gcagcacctg gtcgatgaac agaaagttga gcgccgccac
     3181 cagcacgccg gccgcgaaca ccggccggag catctgggcc acgctcaccc cggtcgcccg
     3241 catggcggtg atctcgttgt cggcggccag atggctgaag ccgtacagca ccgacaccag
     3301 caccgccatg ggcagggtca gcgccacgat gaagggcagg aacaacagca gcacttcggt
     3361 gatcacgtcc gccggcaggc ccttcccgac cagatccccg aaccgtttgg cgatctggtt
     3421 gagcatcaac atgccggtga gcgccccgag cgaaaagaga aacggggcca gcagctggcc
     3481 cagcaggtag cgggagagca ggcgcacggc tcaaacctag tcgggcagtc ggtcagtcgg
     3541 tcagtcggtc aggtcgcggc ccgactgacc aacagcccga ccgaccgact agcttgtttg
     3601 ccatgctcat tcgccccatt ctattggcct tcttcctcgc gggctgccag gaaaaggccc
     3661 cgccagcgcc ggaattcgac ggcgaccagg ctctcgccta cgcccggacc caggtcgact
     3721 tcggaccccg catcccgggc accgaaggcc acctgcggat ggccggctgg ctcgactcgc
     3781 tgctccggac ccgggccgac acggtcgtgg tccaggcctg ggaccacgtc acggccgacg
     3841 cgaagacctt gccgatgcgg aactacatcg cccgtttcaa tccccaggcg acgactcggc
     3901 tgctcttcct ggcacattgg gacacccgcc ccatttcgga tgcggccggc gccagcgact
     3961 cgaccgcgcc ggtccccggc gccaacgatg gcgcctcggg ggtcgcggtg ctgctcggca
     4021 tggcggacgc gctcaagagg tcccccccag gggtcggggt ggatctgctg ttcgtggacg
     4081 gtgaggacta cggcgattgg gacgccagcg ggcgtccgga tgtgctgatc ggttcgcgct
     4141 actacgccaa gaatccggta ccgggacccc agccccgctt tgccgtcctg ttcgacatgg
     4201 tcggcgacgc catgctgcag atccccaagg agagctactc cgtgaccggg gcgcccgatg
     4261 tggtggacct ggtgtggagc acggccgccc ggttgggata ccagaccacg ttcattgacc
     4321 agcaaggcat tgcgaccacc gacgaccaca ttccgctgca ggaagcgggc atcaaggcca
     4381 tcgaccttat cgacttcgac tacggtccca acaacagtta ctggcacact cctcaggaca
     4441 ccttcgacaa gctgagcgcc cggtccctca agatcgtggg cgatgtggcc atggcggtga
     4501 tacgggaggc gcggccgtga actgccggtc gaaggcggtc gaagcggtcg aagacagtcg
     4561 aaggcggtag ttgttcagtc accgtcttcg accgtcttcg accgtcttcg accacttcga
     4621 cgaaattggt gggctccgcg tttagatgat ggcagctcgg aagactgtcc ccgctaatct
     4681 cggggaatga cgaaaagtga gcgccgcgtc atcatcgcgc tgctggcttt ggccgttgcc
     4741 ggtcagggcg ttcgcctggt cttcgaccga accgctccgc ccggcgaggc cctgctacct
     4801 cctcggcagc gtgcgaatgt cgcggcacaa cgcgaggcga gccgcgcagt cggaattcct
     4861 ctccaaccgg gcgagcggct cgatccggac cgcgcctccg cccaggagct ggcccgattg
     4921 cccggaattg gcatgcggat ggccaaggaa atcgtgtcgg accgcgaact tcggggtttt
     4981 ttcgggtcgc cccaggggtt gttacgcgtg gacggtatcg ggccggctac cgttggcagg
     5041 ttggagccgt tcttgcgatt ccagacgccc cagtccgggg ggaccgcgcc gtcctccctg
     5101 ccgaacctca acacgatgac ggcggccgac ttggatcggc ttcccggcgt gggtccttcc
     5161 cgtgcccggg cgatcctcgc atatcgcgac aagaacgggc cgttcgcgga tccgcgcgac
     5221 ctggagcggg tgcctggagt tggtcaaaga ttggccgagc ggttgacccg gttggtagtg
     5281 gtcgggtagg aggcaccttg gccgatgacc tggacaaacg acgatggaga agcccggcgg
     5341 atcgaccgcc gctacccact gatgacccac gactcacggc tggcatgact gtaacgctgc
     5401 actcaaccga ccgactcggc gatctcctgc ttcaggaggg gctgatctca tccgatcagc
     5461 tcaggcaggc gctggccgaa cagcgccagt ccggtcaccg gctgggatac gtgctggtca
     5521 agcagaacat cctggaagag gtcgagatca ccaaggcgct ggcccggcag ctccggatgc
     5581 cggcggtgga tctctcccgc ttcgagcccg atcccaagct gcttcggctg attccggccg
     5641 atatggcccg gaagcacctg gtgatgccgc tccggcggga cgggcggaac ctcaccgtgg
     5701 ccatggccga tccgtcggac ctgagcctgc tgcaggacct caagttcatc acccggttcg
     5761 atgtgttccc ggtgatcgcc ggcgagtaca ccctccgcac cctgatcgac aagtacgtcg
     5821 agaacggcga ccagcagcaa ctgaccgacc tgctgcgcga cgtcgaggaa tcgggcgatg
     5881 ggctcgaggt gctgcaggac caggaagagg agaccgccac ccaggcccag atcaacgacg
     5941 cgccggtggt caagctgatc aacggcattc tgggcgaggc ggtgcggcgg ggggccagcg
     6001 acatccacat cgagcccttc gaacacgaaa tgcgggtgcg ttaccggatc gacggcgcgc
     6061 tgcaggag
//
LOCUS       DASWKS010000060         5908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1139213, whole genome shotgun sequence.
ACCESSION   DASWKS010000060 DASWKS010000000
VERSION     DASWKS010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5908
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139213"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VGA78_01975"
     CDS             <1..188
                     /locus_tag="VGA78_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892655.1"
                     /translation="PGMTAEEMAAERMAELEARVADLELAQDRVAQLEERMDFSERLL
                     VQGRGAAALEERQSRDS"
     gene            234..629
                     /locus_tag="VGA78_01980"
     CDS             234..629
                     /locus_tag="VGA78_01980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892656.1"
                     /translation="MVSREDIQSFIDRLESGGPPADEVAPGLWVLQTTDGAECVVHYS
                     PPVVVLRVRVMEPPTGDNRRADLYRRLLELNARELVHGSYGLEGDHVVLTDTLELENL
                     DFNEFQASYDSIMLALATHMGSLAQYRER"
     gene            634..1404
                     /locus_tag="VGA78_01985"
     CDS             634..1404
                     /locus_tag="VGA78_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HEX9892657.1"
                     /translation="MGIFDRIATLFRSNLNDLISRAENPEKMLNQLILDMKTQLAKAK
                     QEAASAIADEKRLQADAEQLKKQAEDWERRAMLAVQEGRDDLATQALLRYNEALQGAQ
                     QLHETWVRHKAETDNLKVSLRQLHDKIEEAKRKKNILVARAKRAEAQQRIQQTMAGMS
                     DKSAFESFDRMAEKIEDIERKALAAAELQQEFSGDDLMQQFKALEYKGSADQQLLELK
                     AKMGLLGKGADEPARQLGKGEHVHDAEVVPEPEGEQQR"
     gene            1501..2577
                     /locus_tag="VGA78_01990"
     CDS             1501..2577
                     /locus_tag="VGA78_01990"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1611 domain-containing protein"
                     /protein_id="HEX9892658.1"
                     /translation="MAPKRFLILADGDFSPMTSKTANSVIRYMPERVVGVVDHVTAGR
                     TANDVLGFGNGIPVVPDMNAGLGLAPDGIMIGIAPMGGRLPEQWRLWLKSALEAGCDV
                     WSGLHTFLGDDPMLADAARARGREIRDVRRPPKDLPVAEGFARLVEPMVLLTVGTDCN
                     VGKMTCQLQLTRQLNARNVRTRFVATGQTGIFIEGWGIAVDAVVADFIAGAAEWLVLE
                     GAKNADIVMVEGQGSINHPGYSGVTLGLLHGACPNAIILCHQASRTHLSEYRSKAWLP
                     IPPLSEYVKLYQSLAGAVWPTKVIGISLNTYDLSDSAARAACEAATRETGLPATDPVR
                     FPDDPALLNATLEARARYLKTGAC"
     gene            complement(2593..2997)
                     /locus_tag="VGA78_01995"
     CDS             complement(2593..2997)
                     /locus_tag="VGA78_01995"
                     /inference="COORDINATES: protein motif:HMM:NF024093.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9892659.1"
                     /translation="MKVRYVIIFVSDIRRSVAFYRDLLGMTVRGEARNSAELDGGGVT
                     LALHAAHVDPDIHHHPPMLAGSCRLGFYVDDLTAVHQRLADAGVRCLSPPEAQYDLRV
                     ALYEDPDGINFTLAEPLPAEEAAEQGGAHRLR"
     gene            complement(3097..5595)
                     /locus_tag="VGA78_02000"
     CDS             complement(3097..5595)
                     /locus_tag="VGA78_02000"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX9892660.1"
                     /translation="MSKTGSGLSSAQAAERLRQAGPNALPEEPAEPAWRRFARQFRSP
                     LIYILLFALLLELGIWLVQRGGFPFEAIAIAAILLLNAGLGMWQEWKAENALERLKEL
                     GTPQIWTMRDGSITRIPSPELVPGDLIRLESGDRVPADGMVQDGENLLLDESVLTGES
                     FPVEKENGAELFSGTLAVRGHTYVEVTRTGPQSAMGRLAGMLGEVESQATPLERRLEE
                     FGRRIARWVLALAALLAAAGLLIEGIGRMGQVLLFAVALAVAAVPEGLPAVLTFTLAL
                     GVERMARRKAVVRRLAAVEALGSVTVIATDKTGTLTENRMVVRGVESPDPPRALRALA
                     LANDAEPGSAAGDPLELALYAWARGQGVEPERLQADQPRLSSRSFDAAWKYMRVTVSE
                     HDSEVSYLKGAPEVLLQHCRMVDADREAWNRKLEEYAAEGLRTLALAWGPGESETELT
                     WLGLVLLWDPPRAEVPDAIAQARAAGIRVLMITGDHPATAQTVARVIGLEAGQVLTGP
                     DLEAMSPDRLRTAVREVSVFARMKPEHKLRLVEALRESGDVVAMTGDGVNDAPALKRA
                     DVGVAMGRRGSAVSREVADLVLLDDNFATIVAAVEEGRSIYYNVQAFIRFLFSTNLSE
                     VLVVALGLVAAAALGLRESDGGWLLPLTAAQLLWINLVTDGAPALALALDRTPGVMQR
                     PPRAVDAPLLDPSSLRFIVTTGSLKALVALALLGLLPLAGTSLDVTRTTVFLFLAVGQ
                     LLFAYPARRTDVTPGPNRLLHFAVLAGVAAQLPILLVPALRAAFDVALGPLPLLPLVA
                     LAAVASWLAAEGAGRIVWRRTKAAPGLEKPGSRV"
BASE COUNT         1052 a         1998 c         1967 g          891 t
ORIGIN      
        1 acccggggat gacggccgag gagatggccg ccgaacggat ggccgagctg gaagcccggg
       61 tggcggacct ggagctggcc caggaccggg tggcgcagct ggaagagcgg atggactttt
      121 cagagcgtct gctggtgcag ggacgcggcg cggccgcgct ggaagagcgg cagtctcgtg
      181 actcgtgact cacgactcgc gactaaattg cagcccgacg ggagactatc acgatggtaa
      241 gccgggaaga catccagtcg ttcatcgacc gattagagag cggcgggcca cccgccgatg
      301 aagtggcacc gggtctgtgg gtgctccaga ccaccgacgg ggcggaatgt gtagtgcatt
      361 acagtccgcc ggtggtggtg ctgcgggtgc gggtaatgga gccgcccacg ggcgataatc
      421 gccgcgccga tctctatcgc cggctgctcg agctgaacgc gcgcgagctg gtccacgggt
      481 cgtacgggct cgaaggagat catgtcgtcc tgaccgacac cctcgagctg gagaacctcg
      541 acttcaacga gttccaggcc agttacgact cgatcatgct cgcgctcgcc acccacatgg
      601 ggtcgctggc gcaataccgc gaaaggtgat ccgatgggca tctttgaccg tatcgcgacg
      661 ctgtttcgat ccaacctgaa cgacctcatc tcccgggccg agaacccgga gaagatgctg
      721 aaccagctga tcctcgacat gaagacccag ctggccaagg ccaaacagga agccgcctcc
      781 gcgatcgccg acgagaagcg gctgcaggcc gacgcggagc agctgaagaa acaggccgaa
      841 gactgggagc gacgcgccat gttggcggtg caggaaggcc gcgacgacct ggccacccag
      901 gcgctgttgc gctacaacga ggcgctccag ggagcccagc agctgcatga aacctgggtc
      961 cgccacaagg ccgaaaccga caacctcaag gtgtcgctgc ggcagctcca cgacaaaatc
     1021 gaggaagcca agcgcaagaa gaacatcctg gtcgcgcggg ccaagcgggc cgaagcccag
     1081 cagcggattc agcagaccat ggccgggatg agcgacaaga gcgccttcga atccttcgac
     1141 cggatggccg agaagatcga ggatatcgag cggaaggcgc tcgcggccgc cgagctgcag
     1201 caggagttct cgggcgacga cctgatgcag cagttcaagg cgctggagta caagggcagc
     1261 gccgatcagc agttgctgga gctcaaggcc aagatgggat tgttgggcaa aggcgccgac
     1321 gagccggccc gccagctggg gaagggcgag cacgtgcacg acgccgaggt ggtgccggag
     1381 cccgaaggcg agcagcagcg ctgaatccgg cgggaccggt cggccccagg ggctgaccgg
     1441 tcttgctttg gtcccgactc ggaatacaat tctgtatact atacctgcga tccccggcta
     1501 atggccccca agcgcttcct gatcctcgcc gacggcgatt tctcgccgat gacctcgaag
     1561 accgcgaatt cggtcatccg ctacatgccg gagcgggtcg tgggcgtggt ggaccacgtg
     1621 accgccggcc ggaccgcgaa cgatgtgctc ggcttcggca acggtatccc ggtggtgcct
     1681 gacatgaacg ccggtctggg cctcgcgccc gacggcatca tgatcggcat cgccccgatg
     1741 ggcggccgcc tgccggagca gtggcgcctc tggctcaagt cggccctcga ggcggggtgc
     1801 gacgtctgga gcggactgca caccttcctc ggcgacgacc ccatgctggc cgatgcggct
     1861 cgggcccgcg ggcgggagat ccgcgatgtg cggcgaccgc ccaaagactt gccggtggcc
     1921 gaagggtttg cccggctggt ggagccgatg gtcctgctga ccgtgggcac cgactgcaac
     1981 gtcggcaaga tgacctgtca gttgcagctc acccggcaac tcaatgcccg gaacgtccgg
     2041 acccgtttcg tggcgaccgg ccagaccggc atcttcatcg aaggctgggg gatcgcggtc
     2101 gacgcggtgg tggcagattt catcgccggc gcggccgagt ggctggtgct ggaaggcgcc
     2161 aagaacgccg acatcgtgat ggtggagggg caaggcagca tcaaccaccc ggggtattcc
     2221 ggggtgacgc tgggtctact gcacggggcg tgtcccaacg ccatcatcct gtgccaccag
     2281 gcttcccgca cccacctgag cgagtatcgc tccaaggcct ggctgccgat cccgcccctc
     2341 agtgaatacg tgaagctgta ccagagtctc gccggggcgg tctggccgac caaggtgatc
     2401 gggatcagtc tcaacaccta tgacctgagc gacagcgccg cgcgagcggc gtgcgaagcg
     2461 gccactcggg agaccggact tccggccact gacccggttc gtttccccga tgatcccgcg
     2521 ctcctgaacg ccaccttgga ggcgcgggcg cggtatctca agaccggagc ctgctgacct
     2581 tcgcgtcctc cctcatctca gccgatgcgc gccgccctgc tccgctgcct cttcggcggg
     2641 gagcggctcg gccagtgtga agttgatccc gtccgggtct tcgtacagcg ccacccgcag
     2701 gtcgtactga gcctccggcg gagagagaca acgaacgccc gcatccgcga ggcgctggtg
     2761 caccgccgtc agatcgtcca cgtagaaccc caggcggcag gagccagcca gcatcggggg
     2821 atggtggtgg atgtccgggt ccacatgggc cgcgtgcagc gccagagtga cccctccgcc
     2881 gtcgagctcc gccgagttgc gggcttctcc tcgaaccgtc atgcccagca ggtcgcggta
     2941 aaaggccacc gagcggcgga tatcactcac gaagatgatc acgtaccgga ctttcatggg
     3001 ccctccaggc gcaccgtggt ccctccccga ggcaccaccc ggataaccat atgtcgaagc
     3061 ccgggaatta tctggtggtt tcgcatgaag aagggctcat acacggctgc ccggcttctc
     3121 gagccccggg gccgccttcg tccgtcgcca cacgatccgc ccagccccct cggccgccag
     3181 ccaggaggcc acggccgcta gagcgaccag cggcaacagc ggaagcggcc ccagcgcgac
     3241 atcgaacgcc gctcgcaagg cgggtaccag caggatcggg agctgggcgg ccacgccggc
     3301 cagcaccgcg aaatgcagca atcggttcgg ccccggggtc acgtcggttc gcctggccgg
     3361 gtaggcaaac aggagttgcc ccacagcgag gaaaaggaag acggtggtcc gcgtcacgtc
     3421 cagcgacgtc ccggccaatg gaagcagacc cagcagcgcg agcgcgacca gggccttcaa
     3481 gctgccggtg gtgacgatga accggagcga gctcgggtcg agcaatgggg cgtccacggc
     3541 gcggggcggg cgttgcatca cacccggtgt gcgatccagc gccagcgcca gcgccggcgc
     3601 gccgtcggtc accaggttga tccagagcag ctgagccgcg gtcagcggca gcagccagcc
     3661 gccgtcgctc tcccggagcc ccagcgcggc ggcggcgacc aggcccaggg ccaccaccag
     3721 gacttcggac agattggtgg agaacaggaa gcgaatgaag gcctgcacgt tgtaatagat
     3781 gctgcggccc tcctccaccg ccgcgacgat ggtggcgaag ttgtcgtcca gcagtaccag
     3841 gtcggcgact tcgcggctca ccgcgctgcc ccgccgcccc atggccacac ccacgtccgc
     3901 ccgcttgaga gctggtgcgt cgttcacccc gtcgccggtc atggccacca cgtcaccgct
     3961 ctcccgcagc gcttccacca atcgcagctt gtgttccggt ttcatgcggg cgaagaccga
     4021 gacctcacgc accgctgtcc gtaaccgatc gggggacatc gcctccaggt cggggccggt
     4081 gaggacctgg ccggcctcga ggccgatgac ccgggccaca gtctgtgccg tggcggggtg
     4141 atcgcccgtg atcatgagga cccggatgcc ggccgctctg gcctgcgcga tcgcgtcggg
     4201 aacctccgct cggggcggat cccatagcag caccaggccg agccaggtca gttccgtttc
     4261 ggactcgccg gggccccacg ccagcgccag agttcggagt ccttcggccg catactcctc
     4321 cagcttccgg ttccatgctt cccggtcggc gtcgaccatc cggcagtgct ggagcaggac
     4381 ttcgggcgcg cccttgaggt agctcacctc gctgtcgtgc tcgctgaccg taactcgcat
     4441 gtacttccag gccgcatcaa acgaccggct ggagagcctc ggctggtcag cctgcagccg
     4501 ctccggctcc acgccctgcc cgcgagccca ggcgtagagg gccagttcca gcggatcgcc
     4561 ggccgcgctg ccgggctcgg catcgttggc cagcgccagc gcccggagcg cccggggtgg
     4621 atcgggcgat tccacgcccc ggaccaccat ccggttttcc gtgagcgtcc cggtcttgtc
     4681 ggtggcgatg acggtgaccg agccgagcgc ctccaccgcg gccaggcgcc ggaccacggc
     4741 tttccggcgg gccatccgtt cgacgcctaa cgcgagggtg aaggtgagca ccgccggaag
     4801 cccctccggc actgccgcca ccgccagggc gaccgcgaac aggagaacct ggcccatccg
     4861 tccgatgccc tcgatcagaa gaccggccgc ggccaacagc gccgccaggg ccagcaccca
     4921 gcgggcgatg cgccgcccga actcctccag acggcgctcc agcggtgtcg cctgggattc
     4981 gacctcgccc agcatgcccg ccagtcggcc catcgcgctt tgcgggccgg tgcgggtcac
     5041 ctccacgtac gtgtgtcctc tgaccgccag ggtaccggag aagagctcgg ccccgttctc
     5101 cttctcgacc ggaaacgatt ccccggtgag gaccgattcg tccagcagca ggttttcccc
     5161 gtcctgcacc atgccgtcgg ccggtacccg atcaccgctt tccagccgga tgaggtcgcc
     5221 cggtaccagc tcggggctgg gtatccgggt gatggacccg tcgcgcatgg tccagatctg
     5281 gggcgtgccc agctccttga gccgctccag cgcgttctcg gctttccatt cctgccacat
     5341 gcccagtccg gcgttgagca gcaggatggc cgcaatggcg atcgcttcga acgggaagcc
     5401 gccccgctgc accagccaga tgccaagctc gagcagcaga gcgaacagca ggatgtagat
     5461 gaggggactg cgaaactgcc gtgcgaatcg gcgccacgcc ggctccgccg gctcctccgg
     5521 caaggcgttg gggccggcct ggcggagccg ttccgccgcc tgggcgctgg agaggccact
     5581 accggtcttg gacattgcgc ccaacggatg gcgaagggtg gagtctaagg gaggggggaa
     5641 taatcagaga atgccgaatg ccgagtgccc attgcagagg tgatcttcac gaaggaagac
     5701 ctgtgccctg ggcactgggc attcggcatt ctctattcat tcaacccttc tccctccccc
     5761 ctcccacatc actagaaggg cttgaaccca ggactaccgt acctcgtcat gtggaagata
     5821 tcccagagcg ggatcgcgta cgcgatcacc accaggatta cggcgaccac gaaccagagc
     5881 tccaggcggt cccagatcga cggtttgg
//
LOCUS       DASWKS010000061        16236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_768379, whole genome shotgun sequence.
ACCESSION   DASWKS010000061 DASWKS010000000
VERSION     DASWKS010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16236
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768379"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VGA78_02005"
     CDS             <1..780
                     /locus_tag="VGA78_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892661.1"
                     /translation="QNTIGDGLENSSAQEGLVALSTRPGFTTRFDLRAGATRFDPGPL
                     GETWTSATGFARFRWAARDRGPSIELNGQRVPLGTTPALVLSRAVRTEGRLLAEVPLG
                     PIRLRGEGRRGTIAALGETNQRWSLDGALVFPLGWWGELSLQGHRLRYDDSSTAGYFA
                     ADKVETVEAGSYLELGDGAPWLAALDLGAGGQRIQRFGEAPGDWKLAARAWGWITYSL
                     GAGRALQLEIEGYNAPGAAAAVATSPAWRHGSMSLSIKWGL"
     gene            891..963
                     /locus_tag="VGA78_02010"
     tRNA            891..963
                     /locus_tag="VGA78_02010"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:924..926,aa:Phe,seq:gaa)
     gene            complement(1035..1577)
                     /locus_tag="VGA78_02015"
     CDS             complement(1035..1577)
                     /locus_tag="VGA78_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9892662.1"
                     /translation="MQFDLELSIDVLRRSPGALRVLLDGIGRPWARGTEGPDTFSPFD
                     VVGHLIDGEETDWIPRARIILAQGPERRFEPYDRFRHYTRNADRSLESLLDEFDRLRA
                     ANLSLLQSWRLTPAQLDLLGEHPSLGPVTLRQLLAAWVVHDLGHLAQVARVMAKQYRD
                     AVGPWVQYQPVLTDHEVPRS"
     gene            1966..2292
                     /locus_tag="VGA78_02020"
     CDS             1966..2292
                     /locus_tag="VGA78_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018310970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9892663.1"
                     /translation="MAKSKVTRSSGNVFADLGLPQPEERLAKAALARELARLIRARGL
                     TQKAAAERLEIDQPKVSHLLHGRLAGFSTERLMGFLTALGRDVEIIVKAAPRSRRRGR
                     MRVVAA"
     gene            3270..4922
                     /locus_tag="VGA78_02025"
     CDS             3270..4922
                     /locus_tag="VGA78_02025"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX9892664.1"
                     /translation="MRLPRIPDRHRTLVLLLLLALALRVAWWTFYVDIIENEGVEYAR
                     LAWNLFHGRGYVGIFGGTHTHFPPFYPLLIGLVAPVAGSEEAAARLISLLAGVATVGA
                     IYHLARRIFDDRVAWLAGALVACHPLLVALSVTTYTEGLFLALSSGCALATVSWIATP
                     SPWRAIAVGALAGFSYLTRPEGIALAAAFGGLLVLAGGLRHHAWRTGLAHASLIALVA
                     ALIASPYVAYLSRLAGGFRWEGKSAHNAIQAGRMAEGMTLNEASRGLTPEGTAAGPSL
                     IASQDSVLSIPASRHGGLRFLMRDPVERFEEIGLGIVRAGFLGAPMLLLLGLSGILLT
                     QWWRNRLLEALALLALPVLGFLVLLAVRWTWPRYFFPLLPGSLVWAAAGADRIAQLVV
                     SGSARIGLPARLHPAARASMAVVLALSVLVLAARDTTSVADLSQTRNGDLRAAGQWIR
                     GDYLAAGEGDSPPLIASLGVALAYYAGGEVVYLPFADEPRALRFLHAAAPDYLAIRDS
                     ELARIPFAQDWFDGRVGDACIHPVTTLPPAAASHVRIWRWTC"
     gene            complement(5167..6042)
                     /locus_tag="VGA78_02030"
     CDS             complement(5167..6042)
                     /locus_tag="VGA78_02030"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9892665.1"
                     /translation="MARLAAAALAVAACGRTPAPPADGARTGWITVPNRLRIFYEIQG
                     QGDTLILIHGGFVDRRMWDEQADELARSYTVIRYDLRGFGRSDLPTKPYHAVNDLLAL
                     YDALGIGSASLIGLSMGGGVALSFTLAYPERVDALVLAASPANGLPVQQEDIDRIMAL
                     FEAGNTGGADSAVALWLRHPMLAALMEKPELASRMEFLARENARFFTLPFWPFESEEP
                     PASERLGEIRVPTLVIWGDRDTETVQQNSAATAERIPGARTGVLRGAGHMVNMERPHE
                     FLRAVRALLEEVPDA"
     gene            complement(6099..7025)
                     /locus_tag="VGA78_02035"
     CDS             complement(6099..7025)
                     /locus_tag="VGA78_02035"
                     /inference="COORDINATES: protein motif:HMM:NF021497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A deacylase LpxR family protein"
                     /protein_id="HEX9892666.1"
                     /translation="MLPRTVEIALLLLMTGAAPLLGQRHSAWSLTVDNDLFAIWRSTS
                     ARTDRDYSSGVELSLARPLSPAVRWTRTLVLTLDHQLFTPDIREPRPVPEDRPFAAVL
                     SAGATLQFEQPDRRHSFGVGLAVTGPPALGDELQELVHDLLNSPVAHGWEQQLPFEVG
                     VSVAYAGDRRLIEAGSEDGVGVRTAARWGGELGTIRSAATIGLGTVAGWRPPRAWRPP
                     APEPSERSGLRVFIPLGVGLDIVGQSIVLDGGVIAKSTGLDRETLVPYAEFGLGVEIG
                     AVAVSWTGHVTGREFETQPGAHRYGTFKLSIR"
     gene            complement(7160..7957)
                     /gene="speB"
                     /locus_tag="VGA78_02040"
     CDS             complement(7160..7957)
                     /gene="speB"
                     /locus_tag="VGA78_02040"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEX9892667.1"
                     /translation="MASIALLGIPYDGDSSYRRGAAGGPAAIRAEITRVRQYSSMTTE
                     GGLDLDRPGLLIESGDVPVTDPEGTRQAIGTAIGRELHAGHRVVALGGDHSITYPILH
                     AVHHTLGRVDVLHFDAHPDLYPVFEGNRYSHACPFARSFEDGLIGRLVQVGIRSQNPT
                     LRAMAERYNVEQFTMREWAGPPRLSFERPVYISLDLDGLDPAFAPGVSHPEPGGLSVR
                     DVIATLQKMEGRVVAGDLVEYNPDADATGGTGVVAVKLLKEMLHTMA"
     gene            7996..9117
                     /locus_tag="VGA78_02045"
     CDS             7996..9117
                     /locus_tag="VGA78_02045"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEX9892668.1"
                     /translation="MSAAHECFAIVAPGLEALAVSELVNLGARVVGRETGGVSFSATS
                     SQLYAANLHLRTVSRVIVRVARFRATAFWELEKQAKLVPWDAFVPPGGSVTLSVTSRK
                     SKLYHQRGIAERLTEAVRQQVSGASGSDSDAAQLFLVRVDHDQVGISADSSGALLHQR
                     GYRLDSGKAPLRETLAAAMLLGAGWDGTAPLLDPFSGSGTIPIEAAMLARRIPPGWRR
                     EFAFERWPGFDGDGWRRVKADAEERILPTAPAVIIGSDRDAGSIEAAQSNAARADVQG
                     SVQFERRALSEVTPPAERGWLITNPPYGVRVGEADRLRDLYARLGQVLSRMPGWSAGI
                     LAADARLIGQTRLQLAEVWRGKNGGIPVRFMVSRRGVSG"
     gene            9217..9591
                     /locus_tag="VGA78_02050"
     CDS             9217..9591
                     /locus_tag="VGA78_02050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892669.1"
                     /translation="MAVATATALGADRLEAQDETAWVGTFKGTFVTDGPSGNMTLTIG
                     QENKVWKFSGAVEAEGAPPANGDGRDIKVEGNAFEFTQTFGEFDVIFKGTRDGTTIKG
                     TIEAYQAGSMVGSGTFELTKQA"
     gene            9588..10730
                     /gene="galK"
                     /locus_tag="VGA78_02055"
     CDS             9588..10730
                     /gene="galK"
                     /locus_tag="VGA78_02055"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004335 - galactokinase activity [Evidence
                     IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HEX9892670.1"
                     /translation="MRRVRAPGRVNLIGEHIDYNGLPVLPFALNREIVLEYRPRADRR
                     VILHNTDSGFPPVEFTLSGDLAAAAAGSWGNYPRAAAQILWRETGPLMGLEGEVSSTL
                     PIAAGLSSSSALVVATALALLDASGREVPREQLMSLLARGERYVGLQGGGMDQAISLA
                     GRQGHALRIDFRPELRLTPVPVPPDWRIIVASSLVEAAKSAGAKESYNTRVGQTRTAL
                     EQVATRGLGIAPPTDYADLLNRVPAEEALARAESVLDEVLYRRFRHVVTEAGRVDAAV
                     EAMHASDLPGFGRLLHQSHVSLRNDYEVSCAELDQLVAIAESAGAVGARLTGAGFGGC
                     TLAACSTTAVDGVMEALAREFYAPRGVSDLGDVLFTATPSDGAGIA"
     gene            complement(10900..13542)
                     /locus_tag="VGA78_02060"
     CDS             complement(10900..13542)
                     /locus_tag="VGA78_02060"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9892671.1"
                     /translation="MLTPRRLLRRLRALLTRGRLDRELDAELDFHLAMNTESRERRGE
                     LHGAARLAAERELGAVLQIKDQVRDTRGVRPVEEFLTDLRVAVRGLMRKPSFTAASLT
                     TFALGVGGVAAVFGAVHGILLTPLPFGDPDRLVVAWEYDQRRAVQQEASPGNFLDWRA
                     RTTGFEALAGIEPFGLDWISPEGPITLATWLVSEGFFDLFRVRPLLGRSFRPDEHQPG
                     RGQAVVLGHALWQRVFGGDSGVVGRILTLDGRPYEVVGVMPRDFDIPYGNDAVWAPKV
                     LAGWEATSRTSPFYSVMGRLKDGVTLEQAQADIARVAAQLAQEYPQTNGHIGARLVPL
                     PEQVVGGARTALLILLGAVGLVMLVAAANIISLQLARALDRAREFSVRAALGAGRGRM
                     VRQLITENLLLAVLGSGLGFGLAVAGLAVIRRLAPPELPRADQLQADGLVLLVAFAVG
                     LLTAVVSGLVPAISAARSDPTKGLGAAGRSVTTSPTARRLRAVLVTSQFALALVLLVG
                     AGLLLRSFVALLNEDRGFRTDRILVMVTQAWGFYTTPPDRAEYVRQAVARLEALPGVE
                     AVGVSSAIPLSSPIGAEQGRIAIVGRPVDPNQTPEAQVAITTGGFFRSLAIPLRRGRL
                     FTPDDRQGTAPVAIVNDAFVRRYLPQGEAIGRRVAVTLARQPGGDREIVGVVADVRRD
                     ALHEAARPTVYLPHAQAPTGAVGFLIRTAGNPDAMLDQAKQVVWSLNASMPVSEATTM
                     ERLVGESLRERRFLLALLGAFALLGLGLAATGIFGVMSYVTGERTREIGVRMAFGADR
                     GRVQRMVLRDGGRLAGAGIVLGVGGALFATRLVERMLYGVRPLDPITFGGGALLLLAV
                     ALLATWIPAFRASRLDPVEALRSE"
     gene            complement(13547..13867)
                     /locus_tag="VGA78_02065"
     CDS             complement(13547..13867)
                     /locus_tag="VGA78_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9892672.1"
                     /translation="MSDRLQGTLDLLILRTLQSEPMHGWGIAQRLQLLSRDLFQPNQG
                     SLYPALHRLEDQGWIAAEWGTSENQRRARFYRLTPAGRRQLARERESWDTFVAAVARV
                     LREA"
     gene            complement(14140..14430)
                     /locus_tag="VGA78_02070"
     CDS             complement(14140..14430)
                     /locus_tag="VGA78_02070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892673.1"
                     /translation="MGIDIPSALVGQIVLFTVFGIIIFALVREAARVVIKALLVVGIV
                     LAIAILAGWLDDSMVGRLLERIGDALIVGIKAVVGWVMRAWAAVSNSPQETP"
     gene            complement(14438..>16236)
                     /locus_tag="VGA78_02075"
     CDS             complement(14438..>16236)
                     /locus_tag="VGA78_02075"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HEX9892674.1"
                     /translation="SGRLFPWPAMQLNALDWVMVALYGLLTVAIGLAVSRRAGSGTQE
                     FFLSGRSLPWWLLGISLVATTFSTDTPNLVTDLVRTGGVSQNWAWWAFCLTGMATVFF
                     YARFWRRSEALTDIAFYELRYSGKPAAFLRGFRAIYLGVFFNAMIMASVNLAAIKIAG
                     VLIGLDKYTTVIICSGITALYAASSGLRGVVLTDAVQFGIAMLGAFTAAYYAVIQPEV
                     GGLAGLFSHPNVAGKLSLLPDFGDWRTAAAVFIIPVAVQWWSTWYPGAEPGGGGYVAQ
                     RMLAARNEKESLLSTLLFNILHYGLRPWPWILVALASLIIYPDVASIQARFPHLDPSI
                     IRNDLAYPAMLVYLPHGLLGIMVASLAAAYMSTISTHLNWGSSYIVDDFYRRFIVPDR
                     PDRHYVTMARVSTVLLVIVAGALSLWLENAIQAFQIMLQVGAGTGRIYLLRWFWWRVS
                     AWSEIAGMVVSFLVAVYFQFVHTRLGFAPLDAGTTLVVGVAITTIGWLTVTWLTPETN
                     RATLQAFYDRIRPLGRGWAGVVDTAGKPSQENVTAVFLCWFLGCVVVYGALFATGSLL
                     YGRWLPGLASAAAAGFAGLHLFRTLPLVGVTR"
BASE COUNT         2705 a         5394 c         5546 g         2591 t
ORIGIN      
        1 cagaacacca tcggcgacgg actggagaac tcctccgccc aggagggact ggtggctctg
       61 tcgacccggc ccggtttcac cacccgattc gatctccggg ccggtgccac tcgattcgac
      121 cccggaccgc tgggtgagac ctggacctcc gcgaccggtt tcgcccgctt ccgttgggcc
      181 gcgcgcgacc gaggcccgtc catcgagctc aatggccagc gagtcccgct cggcaccacg
      241 ccggcgctgg tgctgagtcg ggcggttcgc accgagggca ggctcttggc ggaagtcccc
      301 ctgggaccga tccggctcag gggggaaggc cggcgcggga ccatcgcagc gttgggcgag
      361 accaaccagc gctggagtct cgatggtgcg ctggtattcc cgctgggatg gtggggcgag
      421 ctatcgctgc aaggccatcg cctgcgctac gacgattcca gcaccgcggg ctatttcgcg
      481 gccgacaagg tcgagaccgt ggaagcggga agctacctcg agctgggcga tggagctccc
      541 tggctggcgg ccctggacct gggggcaggc gggcaacgga tccagcggtt cggggaggcg
      601 cccggtgatt ggaagctcgc ggcgagagcc tggggctgga tcacctattc gttaggcgcc
      661 ggccgggccc tgcagctgga aatcgagggc tacaacgccc caggcgcggc cgcggcggtc
      721 gcgaccagcc cggcctggcg tcatggatcg atgagcttgt cgatcaagtg ggggctgtaa
      781 agcaagtatt gagtactgag tactgagtcc gccgccacca ctcccgctta ctcagccaca
      841 tccgtctcat gcttcacggg gggtcgaggg atgcctatat ttgtccgccc ggccaggtag
      901 ctcagttggt agagcacgtg actgaaaatc acggtgtcgg cagttcgatt ctgcccctgg
      961 ccattgcagc agtcgcggac cctcgcccga ttcattacac cacacgttca gtccttccca
     1021 gcacgtcacg ccagctaaga acgaggcacc tcgtggtcgg tgagcacggg ctggtattgc
     1081 acccagggac cgaccgcgtc gcgatactgc ttggccatga cccgcgctac ctgggccagg
     1141 tgacccaggt cgtgcactac ccaggccgcg agcaactgcc tcagggtcac cggccccagg
     1201 ctgggatgct cgcccagcag gtcgagctgg gccggggtga gtcgccagga ttggagcagg
     1261 ctcaggttgg cggcgcggag ccgatcgaat tcgtccagca gtgattccag cgaccggtcg
     1321 gcgttgcggg tgtagtggcg gaagcggtcg taaggctcga accggcgctc ggggccctgg
     1381 gccaggatga tccgggcccg cgggatccag tcggtctcct ccccgtcaat cagatggccg
     1441 accacatcga agggactgaa ggtgtcgggg ccctcggtgc cccgggccca gggtcggcct
     1501 attccgtcca gcaggacccg caaggctccg ggtgaccgcc gaagtacgtc gatcgacaac
     1561 tcgagatcaa actgcatcga ttctctccgg ccaggcccag cgttcaacct aatccctgac
     1621 gttccacgat gacggggtgg aattgcaacc atttcgtgct tagatgggag cagctgacag
     1681 ccgctgcggg gtagttaggt gtgcgcagcg ggagccaggg cccgcccgct tgacgcggta
     1741 tgccagaata agcatatttc cgtatgctcg cgccgccgct gaagccggtc gaatgggtcg
     1801 gcgccagtct ggacgatctc cggagctgtc ccgaggcggt ccaggacgtg gtcggctacg
     1861 cgctgttcct cgcccaaggc agtgagcgcc acccggcagc gaaggcgctc aagggcgcgg
     1921 gcccaggatc accacgcccg gcaccatggg aagaaggagt agcgcatggc caagagcaaa
     1981 gtgacccgca gcagcggcaa cgtgttcgcc gatctggggc ttccccagcc cgaggagcgg
     2041 ctcgccaagg cggctttggc ccgcgaactc gcccggctga tccgggcccg gggcctcacc
     2101 cagaaggcgg cggccgagcg gctggagatc gatcagccta aagtctcgca cctgctgcac
     2161 ggccgtctcg ccggcttctc caccgaacgc ctgatgggct tcttgaccgc gctcgggcgc
     2221 gacgtggaaa tcatcgtgaa ggcggcgccc cgctcccggc ggcgtggccg catgcgcgtg
     2281 gtcgccgcct aacgcgcgtg gggtatcctc cgccgtgatg tccattgaaa actcgcgtcg
     2341 ggtcgccgag gcatgagtta cgaccaatct ttgcccgcgg tatgttacgt cgttcagtcg
     2401 ctgacccctt gccggtaggc gcggtttcag gagagcccat gcgccttccc ggcatccgga
     2461 ccgtcggccg cggtgcggtt cggctggggg atcggctgtt ccgctacaga cgccgaaccc
     2521 ttgagagtgg agagacagtc gtcaatttct ggttgggtca gtaaggcatg gatgctgcag
     2581 agttgtttct tgggttctgc ttcgatcatg caggcagcat atcggcgcgc gttggaaatt
     2641 gatgctagtg aagagacagc ccgtggatac gtcgcgctct cgtactttct cagcggggat
     2701 ggcgagaaga cttcgtcgct ggtgcaccct gagccgggtc ggagtcgaga cccggcactg
     2761 ctcagtgtgt gggccgctct gggggagact tccgctgaag tcattagtcg acttgaacag
     2821 ggcctaagac aatcaccatc gtccctcaga ctctggcgtc agtgtgcgac ggaaacactt
     2881 agagccggcc tcttgcgaca agcaagggaa gcccacagct ggttgtcgcg gcatgaggat
     2941 agtccatcgg agcgccagcg agttgctgaa atagtggaaa ggcaccactg gtaaccagcc
     3001 ggactggcca agtgaagaag acagtaggcc cggttctggt tgtggccggg ctttcgcctt
     3061 cgcggcctgc tggcgcgggt cttagaggcc atgtacgctg gcgggggcgt ggaggccgtc
     3121 ggacgagttc gaggaccgct tgccgattgg cgacgggaag gtcctgaggc cttagtgtcg
     3181 aaggtctcgt tcggcgggta gcgaccggac cggcccgcgg taggtttcgc tgatccgcct
     3241 tccagcggcc gcgccttcca ggagagccca tgcgcctgcc ccgcatcccg gaccggcacc
     3301 gcactctcgt tctgctcctg ctcctggcgc tcgctctccg agtggcgtgg tggacgttct
     3361 acgtcgacat catcgagaac gaaggcgtgg agtacgcccg gttggcctgg aacctgtttc
     3421 acggccgcgg atacgtgggc atcttcggcg gcacccacac ccacttccct cccttctacc
     3481 cgctcctgat cgggctcgtg gcgccggtcg cgggatcgga agaggccgcg gcgagactga
     3541 tttcgctcct ggccggggtc gcgaccgtcg gcgcgatcta ccacctggcc cgacggatct
     3601 tcgatgatcg ggtagcgtgg ctggcaggcg ccctggtggc ctgccatccg ctgctggtgg
     3661 ccctctcggt gaccacgtac acggaagggt tgtttctcgc cctctcctcc ggctgcgccc
     3721 tcgcgaccgt cagctggatc gcgacgccat cgccgtggcg agccatcgcg gtgggagcgc
     3781 tggcgggttt ctcgtacctc acccggcctg aaggcatcgc actggccgct gcattcggcg
     3841 gcctcctggt tcttgcgggc ggattgcggc accatgcctg gcgcaccgga ctggcgcacg
     3901 cctcgctgat agccttggtc gccgcgctga tcgcttcgcc ctacgtggcc tatctctcgc
     3961 gtctcgccgg cggattccgt tgggaaggca agtcggccca caacgccatc caggccggcc
     4021 gcatggccga gggcatgacg ctcaacgagg cttcccgcgg actgactccc gagggcacag
     4081 cggccggccc gtctctgatt gcgagtcagg acagcgtgct ctcgattccc gccagccggc
     4141 atgggggact ccgcttcctc atgcgcgatc cggttgagcg cttcgaggaa ataggactgg
     4201 gcatcgtgag ggcagggttt ctcggtgccc cgatgcttct gctcctcggg ttgagcggga
     4261 tcctcctcac tcagtggtgg cgcaaccggt tgctcgaagc gctggcgctc cttgcgcttc
     4321 cggtgctggg ctttctggtg ctgctggcgg tgcgctggac ctggccccgc tattttttcc
     4381 cgctccttcc gggcagcctg gtctgggcgg cggccggcgc tgatcggatc gcccagctgg
     4441 tggtctccgg atccgcccgc atcgggctcc ccgcccgcct tcacccagcc gcgcgagcgt
     4501 cgatggccgt agtgctggcg ctgagcgtgc tggtacttgc cgcgcgggat acgaccagcg
     4561 tcgccgatct gtcgcaaacc cggaacgggg acctgcgggc ggcggggcag tggattcggg
     4621 gcgactacct cgcggccggg gagggcgatt ccccgccgct catcgccagc ctgggtgtcg
     4681 cgctggccta ctacgccggg ggcgaagtgg tgtacctgcc ctttgccgac gagccacggg
     4741 cgcttcgctt tcttcacgcc gcggccccgg actacctcgc cattcgcgac tcggagctgg
     4801 cccggattcc gttcgcgcag gattggttcg acggcagagt gggcgacgcg tgtatccacc
     4861 cggtgacgac tctgccgccg gcggccgcgt cccacgttcg gatctggcgc tggacctgct
     4921 gatcccggaa aaccaaaacc ccgccgcgat ccctgaggat ggcggcgggg tggttggcat
     4981 cgagcccgag gcgagcgcct cgctcggtgt cagaacgaac tgcgaggctc gttaacgagc
     5041 caggcgatcg cttgccctgg ttgagctcga tatgcaacac tcactagaca atggatcacc
     5101 tcctcggctg gggttgaaca ttgggcagaa gtccagcgtc ctgctcctga taagctagta
     5161 cggctgtcaa gcgtccggta cttcctccag cagggcccgc accgcccgca ggaactcgtg
     5221 gggccgctcc atattcacca tgtgccccgc cccccggagc acgccggtgc gcgccccggg
     5281 gatccgttcg gccgtggcgg ccgagttctg ctgcaccgtc tcggtgtcgc ggtcgcccca
     5341 gatcaccagg gtgggaaccc ggatctcgcc cagccgttcc gaggccggcg gctcctcgga
     5401 ctcgaaaggc cagaagggca gggtgaaaaa ccgggcgttc tcccgggcca gaaactccat
     5461 ccggcttgct agctcgggct tctccatcag cgccgccagc atcggatggc gcagccagag
     5521 cgccacggcg ctgtccgccc cgccggtgtt ccccgcctcg aatagcgcca tgatccggtc
     5581 gatgtcctcc tgttgcaccg gaaggccgtt cgccgggctc gcggccagca ccagcgcatc
     5641 gacccgctcg ggatacgcca gcgtgaaaga cagggcaact ccaccgccca tcgacaatcc
     5701 gatcaggctg gcgctgccga tgccgagcgc atcgtagaga gcgagcaggt cattgacggc
     5761 gtggtagggt ttggtgggca ggtccgaccg gccgaatcca cgcagatcgt aacggatgac
     5821 ggtgtaggat cgcgccagct catcggcctg ttcgtcccac atccggcggt cgacgaatcc
     5881 gccatggatc aggatgaggg tatcaccctg accctggatc tcgtagaaaa tccggagccg
     5941 gttggggacg gtaatccacc cggtgcgggc cccgtccgcc ggcggtgcgg gcgtgcgacc
     6001 gcacgccgct accgcgagcg ccgcggccgc cagtcgtgcc atcgccccga atcgactcgt
     6061 ccaccgcacc tgacaagtat actccgcgcc cgggacgcct atcggatcga gagtttgaag
     6121 gtcccgtaac ggtgggcacc gggctgggtt tcgaattcgc gaccggtcac gtggccggtc
     6181 catgatacgg ccaccgcgcc gatctccacg cccaggccga actcggcgta ggggaccagg
     6241 gtttcgcggt ccaggccggt ggacttggcg atcacgccgc cgtccagcac gatggactgg
     6301 cccacgatgt cgagccccac gcccagggga atgaacaccc tgagcccgct tcgctccgac
     6361 ggctccggag ccggcggccg ccaggctcgg ggagggcgcc accctgcaac ggtccccagt
     6421 ccaatcgtcg cggcggaccg aatggttccc agctctccgc cccaacgcgc tgcggtgcgt
     6481 accccaacac cgtcctccga cccggcttcg atcagtcggc gatcgccggc gtaggccacg
     6541 ctcacgccca cctcgaacgg caattgctgc tcccatccgt gggctaccgg cgaattgagg
     6601 agatcgtgca ccagctcttg cagctcatcc cccaaggcgg ggggtccggt gaccgccagc
     6661 cccacgccga aactgtggcg ccggtccggc tgctcgaatt gcagggtcgc ccccgcggat
     6721 agtacggcgg cgaaaggccg atcctcggga accgggcgcg gttcccggat atcaggcgta
     6781 aacagttgat ggtcgagggt cagaaccaag gtacgggtcc agcggacggc aggcgacagc
     6841 ggcctggcca ggctgagctc gaccccgctg gagtagtcgc gatcggttcg agcgctggtc
     6901 gaacgccaga tggcaaaaag gtcgttgtcg accgtcaggc tccaggcgga gtggcgctga
     6961 cccaggagcg gagccgcccc ggtcatcagg agaagcaggg caatctcgac cgttctcggc
     7021 aacatgtggc tggcccccgg tgttcagatc tggggggccg accctcaacg gccccacttg
     7081 taaatgcgcc gccggcaaaa gcgccccgac attcgttcaa cgtggcctgg ttccgtccgg
     7141 ttcccgggtc gaacccggtt caggccatgg tgtgcagcat ttccttgagc agcttgacgg
     7201 ccactacccc cgtgccgccg gtggcatcgg cgtcgggatt gtattcgacc aggtctcccg
     7261 ccaccacccg gccttccatc ttctggaggg tggctatgac gtcacgcacg ctcaggccgc
     7321 ccggctccgg atgggagacc cccggggcaa acgcaggatc cagcccgtcc aggtcgaggg
     7381 agatgtacac cggtcgctcg aacgagagcc ggggcggccc cgcccattcc cgcatggtga
     7441 actgctccac gttgtaccgc tcggccatcg cacgcagggt gggattctga ctccggatgc
     7501 cgacctgcac cagcctgccg atcaggccat cctcgaagga gcgggcgaag gggcaggcgt
     7561 gactatagcg gttgccctcg aataccggat acagatcggg gtgcgcgtca aagtggagaa
     7621 cgtcgacccg gcccagggtg tgatgcacgg cgtgcaggat aggataggtg atcgaatgat
     7681 cgccgccgag cgccaccacc cggtgtcccg cgtgcagttc tcggccgatg gcggttccga
     7741 tcgcctggcg ggttccttcc ggatcggtga ccgggacgtc gccgctctcg atgaggaggc
     7801 ccggccggtc gaggtcgagt cccccctcgg tcgtcatgga cgaatactgc cgaacccggg
     7861 tgatctcggc ccggatggcc gcaggtcctc ccgccgcgcc cctgcgatac gaggagtcgc
     7921 cgtcgtacgg aatgccgagc agggctattg aggccatagt gggaaagtta tccgcggaag
     7981 aggcagatta cccagatgtc cgccgcccac gagtgcttcg cgatcgttgc gccgggactc
     8041 gaagcgctgg cggtctccga gctcgtaaac ctcggcgctc gggtcgtcgg ccgcgaaacc
     8101 ggtggcgtga gcttcagcgc cacgtcgtcg cagctgtacg cggccaacct gcatctgcga
     8161 accgtatcgc gagtcatcgt acgggtggcc cggtttcgcg cgaccgcatt ctgggagctc
     8221 gagaaacagg cgaagctggt tccctgggac gccttcgtcc cgcccggggg gagcgtgacc
     8281 ctcagcgtga cctcgcgcaa gtcgaagctc tatcatcagc gcgggatcgc ggagcggctg
     8341 accgaggcgg tgcggcagca ggtgtcgggc gcctccggct ccgacagcga cgccgctcag
     8401 ctcttcctgg tccgggtcga tcatgaccag gtcgggatca gcgccgacag ctccggcgcc
     8461 ctgctgcacc agcgggggta ccgcctggac tcgggcaagg cgccgctgcg cgaaaccctg
     8521 gcggcggcga tgctgctggg cgccggctgg gacggtaccg ctccgttgct cgatcccttc
     8581 tcgggctcgg gcaccattcc gatcgaagcg gcaatgctgg cgcgacggat cccgccggga
     8641 tggcggcgcg aattcgcctt tgagcgctgg cccggcttcg acggcgatgg atggcgccgg
     8701 gtgaaggcgg acgcggagga acggatcctg cccacggccc cggccgtcat catcggctcg
     8761 gaccgcgacg ccggatcgat cgaggcggct cagtccaacg cggcccgggc cgacgtgcag
     8821 gggagcgtcc aattcgagcg gcgcgccttg tcggaggtga cgccaccggc tgagcgaggc
     8881 tggttgatca ccaacccgcc ttatggagtg cgggtgggag aggccgatcg tttgcgggac
     8941 ctttacgccc ggctgggtca ggtgctgagt cgcatgcccg gctggtccgc cgggatcctg
     9001 gccgccgatg cccgtctcat cgggcagacc cggttgcagc tagccgaagt ctggcggggg
     9061 aagaatggcg gaatcccggt caggttcatg gtcagtcgac ggggggtttc tgggtgaaac
     9121 cttccggtga taacgttcgt aaatcggaaa cgtcccaata gtccctcaat cggagtccta
     9181 atgaccttca cgacgcttcg ccgagccgta gcgctcttgg cagtcgccac ggcgaccgcg
     9241 ctcggcgccg accgcctgga agcccaggat gaaaccgcct gggtcggcac attcaagggc
     9301 acgttcgtta cggatggccc gtcgggcaac atgacgctga ccatcgggca ggagaacaag
     9361 gtctggaagt tcagcggcgc ggtggaggcc gagggtgctc ctcccgccaa cggggatggt
     9421 cgtgatatca aggtcgaggg caacgcgttc gaattcaccc agaccttcgg cgagttcgat
     9481 gtgatcttca agggcacgcg cgacggtacc acgatcaagg gcaccatcga ggcgtaccaa
     9541 gcggggtcca tggtgggctc gggcaccttc gagctcacga aacaggcttg aggcgggttc
     9601 gcgcgcccgg gcgcgtcaac ctgattggtg agcacatcga ttacaacggt ctcccggttc
     9661 tgccgtttgc gctgaaccgg gagatcgtgc ttgagtaccg cccccgcgcc gaccgccgcg
     9721 tcattctgca caataccgat tccggttttc ctccggtcga attcacgctc agtggcgacc
     9781 ttgccgccgc cgccgccggc tcgtggggca actacccccg tgccgcggcc cagatcctct
     9841 ggcgcgagac cggccctctc atggggctcg agggcgaggt gtcttcgacg cttcccatcg
     9901 cggccgggct gtcatcgtcg tcggcgctgg tggtggccac cgcgctggcg ttgctcgacg
     9961 ccagcggacg cgaggttccc cgcgagcaat tgatgagcct gctggcccgg ggggagcgtt
    10021 acgtcgggct ccaaggcggt ggcatggacc aggcgatcag cctggcagga cggcaggggc
    10081 acgcgctccg gatcgacttc cgtcccgagc tgcggttgac gccggtgccg gtcccgccgg
    10141 actggaggat cattgtggcc tcgagcctgg tggaagcggc caagtcggcc ggtgcgaagg
    10201 agagctacaa cacccgggta ggccagaccc ggacggcgct ggagcaggtg gcaacgcggg
    10261 gcctggggat cgcgccgccg accgactatg ccgatttgct gaaccgggtc ccagccgagg
    10321 aggcgctggc ccgggccgag tcggtgctgg acgaggtgct ctaccggcgg ttccgccacg
    10381 tggtgaccga ggccggccgg gtggatgcgg ccgtggaggc gatgcacgcg agcgatctgc
    10441 ccggcttcgg gcggctgctg caccagtctc atgtcagtct tcggaatgat tacgaggtga
    10501 gttgtgcgga gctggaccag ctggtggcca ttgccgagtc cgccggagcg gtgggagcga
    10561 ggctgaccgg ggccggcttt gggggctgca ccctggcggc gtgctcgacc actgcggtag
    10621 atggcgtcat ggaagccctg gcccgtgagt tctacgcgcc gcgcggggtc tccgatttag
    10681 gtgatgtgct cttcactgcg accccatcgg acggggcggg catcgcctga ttcttcgctt
    10741 cggagctcct gaaacacaaa cagcaatcca cggattacac ggattacacg gatgttgcaa
    10801 accccaccga cgatcaagtc ggccctggtt gttagtgctt tgtggtagtt gaatccgtgt
    10861 catccgggta atccgtggat ggctgttagg cgctcggcgt cactccgaac gcagcgcctc
    10921 gacgggatcc agtcgcgatg cccgaaaggc cgggatccag gtcgccagga gcgccacggc
    10981 caggagcaac agcgccccgc ccccgaacgt gatcgggtcg aggggacgca ccccgtagag
    11041 catccgctcg accaggcgcg tagcgaacag agccccgccg acgcccagca cgatcccggc
    11101 ccccgccaac cggccgccgt ctcgcagcac catccgctgg acccggcccc ggtcggctcc
    11161 gaacgccatc cgcaccccga tctcccgggt ccgttcgccc gtgacatagc tcatgacgcc
    11221 gaagatgccg gtggcggcca ggcccagtcc caacagggcg aatgcgccta acagcgccag
    11281 caggaaacgg cgctcgcgga gcgattcacc gaccagccgc tccatggtgg tggcttcgga
    11341 caccggcatg gaggcgttga gcgaccagac cacctgcttg gcctgatcca gcatggcatc
    11401 gggattgccg gcggtgcgga tcaggaatcc gacggcgccg gtgggcgctt gggcgtgagg
    11461 caggtacacc gtgggccggg cggcttcatg caacgcatcc cggcggacgt cggccaccac
    11521 cccgacaatc tcgcggtcgc cgccgggctg gcgggccagc gtgaccgcga cccgccggcc
    11581 gatggcctcg ccctgcggca ggtagcgccg gacgaacgcg tcgttgacga tcgccaccgg
    11641 cgcggtaccc tggcggtcgt cgggggtgaa caaccggccc cgccgcaggg gaatggccag
    11701 gctccggaag aagccgcccg tggtgatggc gacctgggcc tcaggggtct gattgggatc
    11761 gaccggccgc ccgacgatcg cgatccggcc ctgctcggcg ccgatgggcg agctgagcgg
    11821 aatggcggac gagacgccca ccgcctcgac ccccggcagg gcctccagtc gcgcgaccgc
    11881 ctggcggaca tactccgccc ggtccggcgg ggtggtgtag aagccccacg cctgggtcac
    11941 catcaccagg atccgatcgg tccggaaccc gcggtcctcg ttcagcagcg ccacgaaact
    12001 ccggagcaga agcccggccc ccaccagcag caccagcgcc agcgcgaatt gtgacgtgac
    12061 caggaccgcc cgcaaccggc gggcggtggg gctggtggtg accgagcgac cggcggcccc
    12121 caatcctttg gtcggatcgc tgcgagccgc cgagatggcc ggcaccaggc cggagaccac
    12181 cgcggtgagc agtccgaccg cgaaggcgac cagcagcacc aggccgtccg cctggagctg
    12241 atccgcccgc ggcagttcgg gcggggccag ccggcggatg acggccaatc cggcgaccgc
    12301 gagcccgaaa ccgagtccgc tccccagcac ggccagcagc agattctcgg tgatcagctg
    12361 gcgtaccatg cgtccccggc ccgcgcctaa cgcggcgcgg accgagaatt cccgggcccg
    12421 gtcgagggcg cgcgccagct gcaggctgat gatgttggcg gccgcgacca gcatgaccag
    12481 cccgaccgcc cccagcagga tcagcaacgc ggtccgggcc ccgcccacaa cctgctccgg
    12541 cagcggcacc agacgggccc cgatgtgtcc gttggtctgg gggtattcct gcgccagctg
    12601 ggcggcaacc cgagcgatat cggcctgggc ctgttccagc gtcacgccgt ccttcaaccg
    12661 gcccatgacg ctgtagaacg gtgaagtgcg agaggtcgct tcccagcccg ccagcacctt
    12721 gggagcccag acggcatcgt tgccgtaagg aatgtcgaag tcgcgcggca tcacccccac
    12781 gacctcgtag ggcctcccgt ccagggtcag gatccgtccg accacgccgg aatctccgcc
    12841 gaagacccgc tgccacaggg catggcccag taccaccgcc tggccccgac ccggctgatg
    12901 ctcgtcgggc cgaaagctcc tgcctaacag cggtctgacc cgaaacaggt cgaaaaaccc
    12961 ttcgctcacc agccaggtcg ccagggtgat cgggccctcg ggcgagatcc agtcgagacc
    13021 gaatggctct atgcccgcca gagcctcgaa cccggtggtc cgggctctcc aatcgaggaa
    13081 gttcccggga gaggcctcct gctggacggc tcgccgctgg tcgtattccc aggcgaccac
    13141 cagccggtcg gggtcgccga aaggcagcgg ggtgagcagg atgccgtgca ccgcgccgaa
    13201 cacggccgcc acgccgccga ctcccagcgc gaaggtggta aggctcgcgg cggtaaacga
    13261 gggctttcgc atcaggccgc ggaccgcgac ccggagatcg gtgaggaact cctccaccgg
    13321 ccggaccccg cgggtgtccc gcacctgatc cttgatctgc agcaccgcac ccagttcccg
    13381 ctcggcggcg agccgggcgg cgccatgcag ttcaccccgt cgctctcggc tctcggtatt
    13441 catggccaga tgaaaatcga gctcggcgtc gagctcccga tcgagtcggc cccgggtcaa
    13501 cagggcccga agccgccgca gcagccggcg cggagtcagc atggcctcaa gcctcccgaa
    13561 gaacccgcgc gacggcagcc acgaacgtgt cccagctctc ccgctctcgg gccagctgcc
    13621 gcctgcctgc cggggttaga cgatagaagc gggcccgccg ctggttttcg gacgtgcccc
    13681 attcggcggc gatccatccc tggtcttcca accggtggag ggccgggtag agcgagccct
    13741 ggttgggttg aaacaagtca cgagagagga gctggagccg ctgggcgatg ccccacccgt
    13801 gcatgggctc actctggagg gtgcgaagga tgaggaggtc cagcgtgccc tggagtcgat
    13861 cggacatggg gtggttcctg ttgactgccg acaagaacag tggctgtctt cttgtcggct
    13921 gtcaacaggg cgggcggcat tgcccgtcgg tccgtcggtc cgtcggtcgc cggtccgtct
    13981 gtttatcgcc cggctagggc gaagagcaga tctacatagc tcttctccac ttcggccagc
    14041 ccggcccgct ttgatcccgg cttcggtcgg atctgaagct gggccgctgg gccgaggccg
    14101 gagcggccag gacgagcagg gccgatgcac aacacgacat cagggagtct cctgtggact
    14161 gttactgacc gcggcccagg cccgcatcac ccaccccacc accgctttga taccgacgat
    14221 gagcgcgtca ccgatccgct ccagcaggcg gcccaccatg gaatcatcga gccatcccgc
    14281 cagaatggcg atggcgagga cgatgccgac gaccagcaac gccttgatga ccacgcgggc
    14341 ggcttcgcgg accagggcga agatgatgat cccgaagacc gtgaagagaa cgatctgacc
    14401 gaccagtgcg ctgggaatgt cgatgcccat ggggcgctca gcgggtcacg ccgaccagcg
    14461 gcagggtacg gaagaggtgc agcccggcga accccgccgc cgcggccgag gccaggccgg
    14521 gaagccagcg cccgtagagc agcgagccgg tggcgaacag cgcaccatag accacgacgc
    14581 agccgaggaa ccagcacaga aacacggcgg tcacgttctc ctgggacggc ttcccggcgg
    14641 tgtcgaccac gccggcccaa ccccggccca gcgggcggat ccggtcatag aacgcctgca
    14701 gggtcgcgcg gttggtttcc ggcgtgagcc aagtaaccgt gagccacccg atggtggtga
    14761 tcgccacgcc gaccaccagc gtcgtaccgg cgtccagcgg ggcgaatccc agccgggtgt
    14821 ggacgaactg gaaatacacc gcgaccagga acgacaccac cattcctgcg atctcgctcc
    14881 aggcactgac ccgccaccag aaccagcgca gcagataaat gcggccggta ccggccccga
    14941 cctgcagcat gatctggaag gcctggatgg cgttctcgag ccagagcgac aacgctcccg
    15001 cgacaatcac cagcagaacg gtgcttaccc gtgccatggt cacgtaatgg cgatcggggc
    15061 ggtccgggac gatgaagcgg cggtagaagt catccacgat gtatgaggag ccccagttga
    15121 ggtgggtgct gatggtggac atgtacgccg ccgccagtga ggccaccatg atccccaaca
    15181 gtccgtgcgg cagatacacc agcatggcgg ggtaggcgag gtcgttccgt atgatggaag
    15241 ggtcgaggtg gggaaagcgg gcctggatcg aggccacgtc ggggtagatg atgagcgacg
    15301 ccagcgccac gaggatccag ggccagggcc tcaggccgta gtgcaggatg ttgaacagca
    15361 gggtggagag cagcgattcc ttctcgttgc gcgcggcgag catccgttgc gccacgtacc
    15421 cgccgccccc gggttcggcg ccggggtacc aggtgctcca ccactgcacc gccaccggga
    15481 tgatgaacac cgccgcggcg gtacgccagt caccgaagtc gggtaggagc gagagcttcc
    15541 cggccacgtt ggggtggctg aagagcccgg caaggccgcc tacctcgggc tgaatcacgg
    15601 cgtagtaggc cgccgtgaac gcccccagca tggcgatgcc gaactggacc gcgtcggtca
    15661 ggaccactcc gcgaagcccc gagctggcgg catagagcgc cgtgatcccg gaacagatga
    15721 tgacggtggt gtacttgtcg aggccgatca ggaccccggc gatcttgatg gcggccagat
    15781 tcaccgacgc catgatcatg gcgttgaaga acacgcccag gtagatggcg cggaatcccc
    15841 gcagaaacgc ggccggcttg ccggagtagc gcaactcgta gaaggcgatg tcggtcaggg
    15901 cttcgctgcg acgccagaac cgggcgtaga agaagaccgt ggccatgccg gtaaggcaga
    15961 aggcccacca ggcccagttc tggctgactc cgccggtgcg aaccaggtcg gtgaccaggt
    16021 tcggggtatc ggtggagaag gtggtggcga ccagcgagat gccgagcagc caccacggca
    16081 aggaacggcc cgagaggaag aactcctggg tcccggagcc ggcgcggcga ctcacggcga
    16141 ggccgatcgc cacggtgagg aggccgtaca gcgccaccat cacccagtcg agggcgttga
    16201 gctgcatggc gggccaggga aagagacggc cggaat
//
LOCUS       DASWKS010000062        14409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1140042, whole genome shotgun sequence.
ACCESSION   DASWKS010000062 DASWKS010000000
VERSION     DASWKS010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14409
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1140042"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..452
                     /locus_tag="VGA78_02080"
     CDS             <1..452
                     /locus_tag="VGA78_02080"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9892675.1"
                     /translation="WRLSPQDWAEVIDTNLTGAFNCISAVAPIFRGQRYGKIVSVSTH
                     QSAQPGFGVAPHAASKAGLEGLTRAAAVDLGPSNVNVNAVAPGFVRTERLEQLPGEVI
                     ERAKKGAVLGRIAEPGDVAQVVAFLCSEAARHITGQVLVVDGGLSLG"
     gene            488..1126
                     /locus_tag="VGA78_02085"
     CDS             488..1126
                     /locus_tag="VGA78_02085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892676.1"
                     /translation="MRFMILAALLAGCTAPPATAQEPAPKPKEQRRVGLLREGLVGQT
                     VPVLPITHVVRDSVPGDSSLMVPRAALLIWADSILAEGLVERAPEIVWLYGSELARIA
                     RRGTGILPEPSRFGHSILRSPKIKTVPDPTRSHLRTLTALAGARFVFVPASLLFAAGE
                     DGAVRATLIALVTDTRTGAISWRADATGTGATAAAALRATIDFFLPDQSTTP"
     gene            1131..2147
                     /locus_tag="VGA78_02090"
     CDS             1131..2147
                     /locus_tag="VGA78_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX9892677.1"
                     /translation="MAYGVTLIPGDGIGPEITAATVKVLEATGIEFDWDEQLAGVIAV
                     ERTGSPIPEATLQSIRERRLALKGPLTTPVGSGFRSVNVALRKEFELYANLRPAFTIL
                     PGRYDHIDIVLVRENLEGLYSGVEHFIQIGADPRAVAVSEAILTRQGAERIIRFAFDY
                     AVGHGRKKVTVVHKANILKMVSGLFLEVGRAIAREYAPELASNDLIVDNAAMQLVLKP
                     EQFDVIVTTNLFGDILSDLISGLVGGLGMTPGGNIGTQGAIFEAVHGSAPDIAGRGIA
                     NPSAQMLAAALMLDHLNEQAAAARVREALRRTIVDDRVRTRDLGGTATTVEFGDAVAR
                     RVSA"
     gene            2176..2415
                     /locus_tag="VGA78_02095"
     CDS             2176..2415
                     /locus_tag="VGA78_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892678.1"
                     /translation="MAGLGWGERCPACQAERKRRARRWARRISLVAALVAAVILSLRV
                     SPGTDARLWIGIGTLATFLLGRIISFRIAMEILPD"
     gene            2447..3808
                     /locus_tag="VGA78_02100"
     CDS             2447..3808
                     /locus_tag="VGA78_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892679.1"
                     /translation="MHRVLSVTTGLLVLATPLPAQRGLTIYSDGRVLVRATLPVRVGS
                     GSSSHRLALGYLDAASIFALDPEVAVMGASYDAAVDEQNTMRRALGRKLVFETGGWRN
                     GVADTVVAEVLGVEPELFRLADGTVTFQRPGRPRYPFDLVLTAPTVALNLRSTAARDQ
                     LRLAWFTDGASWNATYQVVLGRGDARVTGQAQVQSGRLSADEAEIQLLAGNVGRAERD
                     QLRYKRDARVQMAAEAAPSAPAQEERVGEAHLYSIPGRYTLRPGVATVAALFDPVNTA
                     WERVYTVRGQLPWYGPVPQYGEETQVPVEVQYLLKRGAQTPFGQKPLPGGLWRIYQPD
                     SAGRLQLVGEASNQHTAAGQDLRLTAGTAFDITAQRIQTDFVTQRETRRTLATVGYRV
                     TLSSAMDSAVTVDVLEDRQGEWQVLESSVPGEKLSSSQYRFRVRVPAKGQASLTYRIR
                     VVW"
     gene            3858..4673
                     /locus_tag="VGA78_02105"
     CDS             3858..4673
                     /locus_tag="VGA78_02105"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9892680.1"
                     /translation="MTATRLVHLSDLHFGAYVDLEQIAALERLLPEQAAAAIVISGDL
                     SQRARHGEFQRALAFVELCRRIAPTLPIPGNHDVRWWASPFGLRGQGPKYRHYRRYFG
                     DVLGPVLEVPGAVIVGTVSAHGLASGSVTWNPRDLTVKGHLARQEVMRAGAVFGGANP
                     EACRVLALHHNVLRGQISNRWGLARPQEAQRRLVECGAELILCGHDHQEAVGRLDGGT
                     VVATAGTHTFMTRGKRPSVFNLIDLDSGAITVYPMKWTGSSFEPGELTRYERR"
     gene            complement(4741..6030)
                     /locus_tag="VGA78_02110"
     CDS             complement(4741..6030)
                     /locus_tag="VGA78_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892681.1"
                     /translation="MSRSALTALFVLFPAVAPARQVPDTATMRRAIGEYQTACARDGG
                     ALWGKTLCGPLLLIDRATRMSVASESPPDTGFRAMGAVFIGPAPGNVPFANTASLWHG
                     RWWAFALTPLPTTSVARTHLLIHEAFHRIQGELGLSGIDALNNHLNERDGRYWYILEL
                     RAAAAALRLTPETAHQAVQDALLFRTYRHTLFPGADTLERALELQEGLAEYTGQRLAF
                     AAAADAERYAAEQLTAFESRATFVRSAGYGSGPALGLLLDRYAPGWRGLVNQKGLAPQ
                     LAEAVGFVPPSDLASRARERVEVYGGRELAAAEDARELARQKTLTAYRSRLVEGPVLV
                     LRQEGLMRSFNPNTLIPLPEGGTIYPTGTFSAEWGTIEVKTGALVAANFQTLTLPAPA
                     DTTPPSLQGPDWVLRLSAGWVLVPGPRRGDFTVVRKP"
     gene            complement(6027..7886)
                     /locus_tag="VGA78_02115"
     CDS             complement(6027..7886)
                     /locus_tag="VGA78_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892682.1"
                     /translation="MIFALLLTATIAAPSIQGDTTRPRYRISGIISPDGRTVTAHAEV
                     RAPAPSRSVRLAIPGLRITRIGRLSGAPVPARYNGDSSEVTVDGSAPVAVDYTVASDT
                     TRHRQFGYHLFLATGSDDAWYPVVPGHRFADFEVEIEAAPGTAVLTTGGAGRKFVVSR
                     VEGFALAYGDGFVTRAVSQQGLTVTALSQPQDTLLFRTVAESALRAARWYQQTYGFFP
                     VPSLGIVPGYRGARGGFPLSRMFMIHRGDLSPPFVRWITAHELAHYYWGLYVLDGQER
                     LGWLSLGLGIWTDQLYLARTGGVSLAAAWRDPRGDDSFTEFAQAALAGYDQRLGLPET
                     VADSLDYDYNSLVRHGKAATGVYLLALRLGEEQFVALQRRLLDEYRGRALSIEAFGAE
                     LVREGLPDAGAFLAAWARTDASLGYRIAGVEPVNRSLYQIRIQRTGTIPFPVTIEART
                     PTGRVARAAVDGRSALDSVQVELDAAPVEVRIDPDGLLPMASSDNLEMRRVYLRALGA
                     VGPTGRFLTLAADHLRSDPDPLVAAQVVERLFESGRYAEVVEVSGRHPTIAACTDRPT
                     CLAALQVARALVRTGDGPAAEALIRRLEPLLPVYGRTASLRIQLLKTELRSAP"
     gene            8105..9304
                     /locus_tag="VGA78_02120"
     CDS             8105..9304
                     /locus_tag="VGA78_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9892683.1"
                     /translation="MPTATTTSRFTGVDFYAFDTLLSEEERAIRDTVRSWVDDNLMPI
                     IGDCYVEGRFPKELIPQMAELGFFGANLPEEYGCAGLNNVAYGLIMQELERGDSGVRS
                     FASVQGALVMYPIYAFGSEEQKRRWLPRLASGQEIGCFGLTEPDYGSNPAGMITTARE
                     TPDGWVLNGTKMWITNGSQASVAVVWAKTGDIDDVRSIRGFIVPTDSKGFSARDQKGK
                     LSLRASDTSELHLDDVPLPKDALLPKSGGIKSPLSCLTQARYGISWGAIGAAMACYDE
                     AVRYARTRIMFGKPIGQTQIQQVRLADMLTEITKAQFLTLQLGRLKDAGTMNPQQVSL
                     AKRNNVDMATECARESRRLLGANGILAEYHSMRHMANLESVYTYEGTHDMHSLILGQD
                     ITGLSAF"
     gene            9359..10111
                     /locus_tag="VGA78_02125"
     CDS             9359..10111
                     /locus_tag="VGA78_02125"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX9892684.1"
                     /translation="MKIAVCLKRVPDTEMRFTIAPDGKSIDPAGLKYEISTFDEYAVE
                     VALRLNEQQGPGEVTVMGAGPDGLAELLRKALSLGADRAVHLTAADVPFDGMAVAQAL
                     ASELEGQPYDVILFGRNATDTGSGSVGAMAAELLGLPCVTAVMHLEVRDGRGTAQRTL
                     EGATETITFSLPAVLTIDEGIARPRIPSLKGIMAAKKKPMETRPAQFGPVRLTVERLE
                     MPPDRAAGRILGTGPDAVPELVRVLRDEAKVL"
     gene            10112..11101
                     /locus_tag="VGA78_02130"
     CDS             10112..11101
                     /locus_tag="VGA78_02130"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX9892685.1"
                     /translation="MADILVLAETRGGLARKAAFETVTAARAVADSTGGGEVHALVVG
                     GPGVAQVAETLGRFGADVVLALEHEALAHGNPEVTAATMAQRLRGGAYRLALFSASAQ
                     GRDLAPRVAGALGVSLAADVVSFEITGDAVLARHPVFIGKAIATLRLEGSPAVVSLRA
                     GAVTPAEKPRPARVESVTAALDPGAARLVVTAVEARGAAKLDLADAPVIVSGGRGLKA
                     AENFKLVEELAAAFGNAAVGATRAVTDDGWRDPADQIGQTGRVVSPGLYVAVGISGAI
                     QHLAGMRASKVIVAINRDKDAPIFKVADYGIVGDLFEVVPRLTEEIRKLRAEH"
     gene            11110..11982
                     /gene="nadC"
                     /locus_tag="VGA78_02135"
     CDS             11110..11982
                     /gene="nadC"
                     /locus_tag="VGA78_02135"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEX9892686.1"
                     /translation="MTRPEPDLRERLPDLAADARRLARLTLEEDGPADLTTAIVGPVP
                     HPGTGTIEFRGRGVLAGQVYADAVARELDCEVTWEAREGEQVTARAIGRIRGDRAGLL
                     RVERPLLNLLQRASGIASRTRQYVELLGDTPCRLLHTRKTAPGLRLFDVAAVVAGGGA
                     VHRLDLAHTVMIKDNHWRLLAQARRSLDAALRQARERGALSCQVEVESEAQVRLACTA
                     GADRLLIDNQRPAMVRAWSQLARTLRSDIAIEATGGITLENVRDFALAGADYVSVGGI
                     THSPPAADIALELD"
     gene            12001..13647
                     /locus_tag="VGA78_02140"
     CDS             12001..13647
                     /locus_tag="VGA78_02140"
                     /inference="COORDINATES: protein motif:HMM:NF045305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron-transfer flavoprotein:ubiquinone
                     oxidoreductase"
                     /protein_id="HEX9892687.1"
                     /translation="MSRIHPIRHQAPLPLERLIRSQAPGADAIPLDVLFVGAGPAGLA
                     GAIALARMARDDGSLGDVSIGVLEKAESLGEHCLSGAVVNPRAFQELFPGVPEAELPF
                     RQRVDREAVYLLTESKSVKIPTPPTMRNHGNYAGSLCEIVRWMGEQAEALGVNLFPGF
                     PVEALLVDGGRVQGVRTTPTGLARDGSPGNQYVEPTELTARVTVLSEGTRGTLGQAWR
                     QWQSVTSPNPQLFALGVKEVWQVRRPLDRVIHTLGWPLPRDAFGGTFLYPLGPSQVAL
                     GIVVGLDYRQASLDVHQLLQRMKLHPLFRDLLEGGELLEWGAKTIPEGGYYALPERMS
                     GDGLLLAGDTAGFVDVPSLKGIHYAMQSGMLAARAAFAALKSGDPSAATLSQYDRAVR
                     ESYVVRDLYRTRNMRLAFKDGFYVGGFKAGLMTLSGGALFGRRIAMHADVEQEREIGA
                     AAPFPPDNRLTFSKLDAVFKSGNATRDTIPSHLIVGPEVTAEVAEFYSHVCPAGVYER
                     LPDGTLRVNPPNCVDCKATDVVGPRWMPREGGSGPKYRLM"
     gene            complement(13691..14149)
                     /locus_tag="VGA78_02145"
     CDS             complement(13691..14149)
                     /locus_tag="VGA78_02145"
                     /inference="COORDINATES: protein motif:HMM:NF040341.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6174 domain-containing protein"
                     /protein_id="HEX9892688.1"
                     /translation="MMARLPLLFSASILASAACSDTSGPNPAEQIYTAALAQWNESGP
                     ASYDMVLKRQCICQVSEIDVTIQVRNRVVVSRTFTASGDPVGSGQVSLYPDVPGLFAL
                     VRAAMDDDPVFLSATYDQTYGHPIEIQLDLDGSRSDDNVVYTTLQLTPVT"
     gene            complement(14200..>14409)
                     /locus_tag="VGA78_02150"
     CDS             complement(14200..>14409)
                     /locus_tag="VGA78_02150"
                     /inference="COORDINATES: protein motif:HMM:NF040341.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6174 domain-containing protein"
                     /protein_id="HEX9892689.1"
                     /translation="DPQFADLFAAVPGLFDLIEEAIHAPAAGLAVRYNPAYGYPESIQ
                     IDWVAGVVDDEVSYHITDFVVLTAR"
BASE COUNT         2318 a         4806 c         4996 g         2289 t
ORIGIN      
        1 tctggcgcct ctccccccag gactgggccg aggtcatcga caccaacctc accggcgcgt
       61 tcaactgtat cagcgcagtg gctcccatat tccggggcca gcgatacggc aagatcgtca
      121 gcgtcagcac ccaccagtcg gcacagccgg gattcggcgt ggcgccccat gcggccagca
      181 aggcagggct cgagggactg acccgtgccg ccgcggtcga cctgggtcca tccaacgtga
      241 acgtgaacgc ggtggcaccc ggcttcgtcc gcaccgagcg gttggagcaa ctgccgggtg
      301 aggtgatcga gcgggccaag aagggagccg tcctcggccg gatcgccgaa ccgggcgatg
      361 tggcccaggt ggttgcgttt ctctgttcgg aggccgcccg gcacatcacc gggcaggtgc
      421 tggtggtcga tggaggactg tcgctcgggt aaccgcctta accgcctgtc cccgttatct
      481 ttcctgcatg cggttcatga tcttggctgc gcttctggcg ggctgtaccg ccccgcccgc
      541 cacggcccag gagccggccc ccaagccgaa ggagcagcgc cgggttggcc tgctgcgcga
      601 gggtctggtg ggccagaccg ttccggttct tcccatcact catgtggtgc gggattccgt
      661 gccgggcgat tccagcctga tggtcccgcg ggccgccttg ctgatctggg ccgactccat
      721 cctggcggaa gggctggtgg agcgggcccc tgaaatcgtg tggctctacg gcagcgagct
      781 cgctcggatc gcgcgccggg ggaccggcat tctgccggag ccctcccgct tcggccattc
      841 catcctgcgg tcaccgaaga tcaagacggt acccgatccg acccgctctc atctgcgcac
      901 cctcacggct ctggccggcg cccggttcgt gttcgtgccc gcgtcactgc tgttcgccgc
      961 tggtgaggac ggggcggtgc gggctaccct tatcgcgctg gtgacggaca cccgcaccgg
     1021 ggccatttcc tggcgggcag acgcgaccgg taccggagcg accgcggcgg ccgcgcttcg
     1081 cgccaccatc gactttttcc tccccgacca gtcaaccact ccgtaacgcc atggcctacg
     1141 gtgtcacgct gatcccgggc gacgggatcg gccccgagat caccgcggcg accgtcaagg
     1201 tgctcgaggc gaccggcatc gagttcgact gggacgaaca gctggccggc gtcatcgcgg
     1261 tcgagcggac cggctccccg atcccggaag ccacgctcca gagcatccgg gaacgacggc
     1321 tggcgctcaa ggggccgctc actaccccgg tgggaagcgg atttcgctcg gtgaacgtgg
     1381 cgttgcggaa ggaattcgag ctctacgcca acctgcggcc ggcgttcacc atcctgccgg
     1441 gacgctacga ccatatcgac atcgtgctgg tgcgggagaa tctcgaagga ctgtactccg
     1501 gggtcgagca cttcatccag atcggggccg atccgcgggc cgtagccgtc tccgaggcga
     1561 tcctcacccg ccagggcgcc gaacggatca tccgcttcgc cttcgactac gccgtcggcc
     1621 acgggcggaa aaaggtcacc gtcgttcaca aggcgaacat cctcaagatg gtgagcggat
     1681 tgttcctgga ggtcgggcgg gctattgccc gggagtatgc gccggaactc gcgtcgaacg
     1741 atctcatcgt cgacaacgcg gccatgcagc tggtgctcaa gccggagcag ttcgacgtca
     1801 tcgtcaccac caacttgttc ggtgatatcc tgagcgatct gatttcgggt ctggtgggcg
     1861 ggctgggcat gacgccggga gggaacatcg ggacccaggg cgcgatcttc gaggcggtgc
     1921 acggcagcgc gcccgatatc gcgggacgcg gcatcgccaa cccctcggcc cagatgctgg
     1981 cggcggcgct catgctcgat catctgaacg agcaggccgc cgccgctcgg gtccgggagg
     2041 cgctgcggcg gaccatcgtg gacgatcggg tccgcactcg cgatctgggt ggcaccgcca
     2101 ccactgttga attcggcgat gcggtcgctc ggcgggtatc agcctgaggt cccgtgcgtt
     2161 cgctgcggcg aacgcatggc cggcctgggg tggggcgagc gctgcccggc ctgccaggcc
     2221 gagcggaaac ggcgtgccag gcggtgggcc cggcgcatct ccctggtggc ggcgctggtc
     2281 gcggcggtca tcctcagcct tcgcgtatcg cccgggacgg atgcccgcct ctggatcggg
     2341 atcgggaccc tcgcgacgtt tctcctgggc cggatcatca gcttcagaat cgcaatggaa
     2401 atacttcccg attagcgacg cagcgaaggc gaaaggtcgg ttcgacatgc atcgggtctt
     2461 gagtgtcacg acgggtctcc tggttctcgc gactcccctg ccggcgcagc gcggtctcac
     2521 catctacagc gacgggcggg tgctggtgcg cgcgacgctg ccggtgcggg ttgggtcggg
     2581 cagctccagc caccggctgg cgctcggata cctggacgcg gcgtccatct ttgccctcga
     2641 tcccgaggta gccgtcatgg gggcatcgta cgacgccgcg gtcgacgagc agaacaccat
     2701 gcggcgggcc ctggggcgga agctcgtgtt cgaaaccgga ggttggcgca acggggtcgc
     2761 cgacacggtg gtggccgagg tcttaggcgt cgagcccgag ttgttccggc tggccgacgg
     2821 caccgtcacg ttccagcggc cgggccggcc ccgctacccg ttcgatctgg ttctgaccgc
     2881 gcccacggtc gcactcaacc tgcgcagcac ggcggctcgc gaccagcttc gtctggcgtg
     2941 gttcaccgac ggcgcgtcct ggaatgccac ctatcaggtg gtcctggggc gcggcgacgc
     3001 ccgggtgacg ggacaggctc aggtgcagtc gggtcgcctg agcgccgacg aagccgaaat
     3061 ccagctgctc gccgggaacg tgggccgggc cgaacgggat cagctgcggt acaagcggga
     3121 tgcgcgggtg cagatggcgg ccgaggcggc cccttcggcg ccggctcagg aagagcgagt
     3181 gggcgaggcc catctctaca gcattcccgg ccgctacacg ttgcgccccg gcgtcgcgac
     3241 cgtggcggcc ctgttcgatc cggtgaacac cgcctgggag cgggtctaca ccgtgcgggg
     3301 tcagcttccc tggtatggac cggtccccca gtacggcgag gaaacccagg tcccggtgga
     3361 ggtgcagtac ctcctcaagc ggggcgccca gaccccgttc ggccagaagc cgctgccggg
     3421 tggcctctgg cggatatacc agccggacag cgccggcaga cttcagctgg tgggagaagc
     3481 gtccaatcag cacaccgctg ccggccagga tctgcggctg acggcgggaa ccgcattcga
     3541 catcacggcg caaagaatcc agaccgactt cgtgacccag cgggagaccc ggcgcaccct
     3601 ggcaacagtg gggtaccgcg tgacgctttc cagcgccatg gattccgccg tcaccgtgga
     3661 cgtcttggag gatcggcagg gcgaatggca ggtgctggaa agctcggtgc cgggagagaa
     3721 gctctcctca tcgcagtacc gattccgggt gcgggtgccg gccaagggac aggcgtcgct
     3781 gacctatcgc atccgggtcg tctggtgacg ggcggcccga cggacgagcg gtcgggcggt
     3841 cggcttcccg ctgacgcatg accgctaccc ggctggttca tctttctgac cttcacttcg
     3901 gggcgtacgt cgacctcgaa cagatcgcgg cgttggagcg gctcctgccg gagcaggctg
     3961 ccgccgcgat cgtcatttcc ggtgacctgt cgcagcgggc gcgccacggc gagttccagc
     4021 gcgccctggc cttcgtggaa ctgtgccggc gcatcgcgcc gacgctcccg attccaggga
     4081 atcacgatgt ccgctggtgg gccagtccgt tcggcctccg cgggcagggc cccaagtacc
     4141 gacactaccg tcgctacttc ggcgacgtcc tggggccggt gctcgaggtg cccggagccg
     4201 tgatcgtggg aaccgtctcg gcccacggcc tggcgtcggg atcggtgacg tggaaccccc
     4261 gcgatctcac ggtcaaaggt catctggccc gccaggaggt gatgcgggcg ggggccgtgt
     4321 tcggcggcgc gaacccggaa gcctgccggg tgctggcgct gcatcacaat gtgctccggg
     4381 gccagatctc caaccggtgg ggcctggccc gcccgcagga agcccagcgc cgattggtgg
     4441 aatgcggcgc tgagctgatc ctctgcggcc atgatcatca ggaggctgtg ggtcggctgg
     4501 atggcggaac cgttgtagcc accgccggca cgcatacctt catgacccgg ggcaagcggc
     4561 cgtcggtgtt caacctcatc gacctggatt ccggcgcgat caccgtctac cccatgaaat
     4621 ggactggaag ttccttcgag cccggcgagc tcactcggta cgagcggcgt taggaaaagg
     4681 ccagatccct cccattcggt cccgccaccg tttggcggcc cgcttccccc tggccactcc
     4741 tcagggcttc cggaccaccg taaagtcgcc gcgccgcgga cccggaacca atacccaccc
     4801 cgctgagagc cgcaggaccc agtcgggacc ctggagcgaa ggcggggtcg tgtccgccgg
     4861 cgcgggtagc gtgagggttt gaaagttcgc cgccaccagg gcaccggtct tcacttcgat
     4921 cgtcccccat tccgcgctga aggtacccgt cgggtagatc gttccgccct ctggaagcgg
     4981 tatcagggtg ttggggttga acgaccgcat caatccttcc tgccggagca ccaggaccgg
     5041 gccttcaacc aggcgcgacc gatacgcagt gagggttttc tgacgggcca gctctcgcgc
     5101 gtcctctgcc gccgcgagct ccctcccacc gtagacctcc acccgctccc gagcccggga
     5161 tgcaaggtcg gatggtggga cgaagccgac cgcctcggcc aactgcgggg cgagaccctt
     5221 ctggttgacg aggcccctcc accccggcgc ataccgatcc aggaggagcc ccagcgcggg
     5281 cccgctgccg tacccggctg agcgaacgaa ggtcgcccgg gactcgaatg ccgtcagctg
     5341 ctccgcggca taccgttcgg cgtcggccgc cgcggcaaag gcgaggcgct ggccggtgta
     5401 ttccgccagc ccctcctgca gttccagcgc ccgctcgagg gtgtcggctc cgggaaagag
     5461 ggtatggcga taggtccgaa acagcagggc gtcttgcacc gcctggtggg ctgtctcggg
     5521 ggtcaggcgc aaggccgccg ccgcggcccg tagctccagg atgtaccagt atcgtccgtc
     5581 tcgttcgttg aggtgattgt ttagggcatc gatgccgctc agtcccagct caccctgaat
     5641 gcgatgaaac gcctcgtgga tcagcaggtg ggtccgggcc acggacgtgg ttggcagcgg
     5701 cgtgagagcg aaggcccacc aacggccgtg ccagagactg gcggtattcg cgaacgggac
     5761 attcccgggc gccggcccga tgaagaccgc ccccatcgca cggaaaccgg tgtcgggagg
     5821 cgattcgctg gcgacactca tccgggtggc ccggtcgatc aggaggagcg gcccgcagag
     5881 ggtcttgccc cagagcgcgc cgccgtcgcg ggcacacgcg gtctggtatt ccccgatagc
     5941 gcggcgcatg gtcgcggtgt cgggcacttg ccgggccgga gcgaccgccg ggaacaacac
     6001 gaacagcgcc gtcaaggcgc tcctgctcat ggcgcagacc tcagttcggt tttgagcagc
     6061 tggattcgga gcgatgcagt gcgaccgtag accggaagca gcggctccag gcgacggatc
     6121 aacgcttcgg ccgcgggccc gtcgccggtt ctcaccaagg cgcgcgccac ctgcagcgcg
     6181 gcgaggcagg tcggccggtc ggtgcaggcc gcgatggtag gatgccggcc cgagacctcg
     6241 accacctcag cgtagcggcc ggactcgaag agtcgttcga cgacctgggc cgcgaccagc
     6301 ggatcggggt cggagcgaag gtggtccgcg gccagggtga gaaaccttcc cgtgggcccc
     6361 accgcgccga gcgcccgcag gtatacccgc cgcatctcga ggttgtcgct gctggccatg
     6421 ggcagcagtc cgtccgggtc gatccgcacc tccaccggag ctgcatcgag ctcaacctgt
     6481 accgagtcga gggccgacct tccgtcgacc gcggcgcggg cgacccgccc ggtcggagtt
     6541 cgtgcctcaa tggtcaccgg aaacgggatg gtcccggtcc gctggatccg gatctggtag
     6601 agggagcggt tcaccggctc cacgccggcg atacgatagc cgagactcgc gtcggtccgg
     6661 gcccaggcgg ccaggaatgc gcctgcgtcg ggtaggccct cgcgcaccag ttcggctccg
     6721 aacgcctcga tggacaaggc ccgcccgcgg tattcgtcga gcagccggcg ctggagcgcg
     6781 acgaactgct cctcacccag ccggagggcg agcaggtaca caccggtggc cgccttgccg
     6841 tgccgcacca gcgagttgta gtcgtagtcg agcgaatcag cgaccgtctc gggcaatccc
     6901 aggcgctggt cgtatcccgc cagcgcagct tgggcgaact ccgtgaagct gtcgtcgcct
     6961 cgcggatcgc gccaagcggc cgccagcgaa accccgccgg tgcgggcgag atagagctgg
     7021 tcggtccaga tcccgagccc gagcgacagc caacccaggc gctcctggcc gtcgagcaca
     7081 tagaggcccc agtagtaatg ggccagctcg tgagcggtga tccatcgtac gaagggcgga
     7141 ctcagatcgc cccggtgaat catgaacatc cgggacagcg ggaaaccacc ccgcgctccg
     7201 cggtatccgg ggacgatgcc gaggctgggc accgggaaga atccatacgt ttgctggtac
     7261 caccgggcag cacgcagggc cgactcggcc acggtgcgga atagcagggt gtcctggggc
     7321 tgactcaggg cggtgaccgt aagaccctgc tgcgacacgg cgcgagtgac aaagccgtcg
     7381 ccataagcga gggcgaaccc ttcgactctc gagacgacga acttgcggcc ggcgccaccg
     7441 gtggtgagca ccgcggtccc cggcgcggcc tcgatctcga cctcgaaatc ggcgaatcgg
     7501 tggcccggca ccaccggata ccaggcgtcg tcggagccgg tcgccaggaa gaggtggtac
     7561 ccgaattgac ggtgccgggt ggtgtcggaa gcgacggtgt agtccacggc cactggggcc
     7621 gatccgtcga ccgtcacctc cgatgaatcc ccgttgtatc gggccggcac cggtgcgccg
     7681 ctcagtcggc cgatccgggt gatacgcagg ccggggatcg ccagccgcac ggatctgctc
     7741 ggggccggag cccggacttc ggcgtgcgcc gtgaccgtac gtccatccgg ggagatgatc
     7801 ccggagatcc ggtacctggg ccgggtcgtg tcaccctgga tggaaggtgc ggcaatggtg
     7861 gcggtgagga gcagcgcaaa gatcacagcc ttctttacgc cggcctgtgc cggggggttt
     7921 ccgcccgcga ctcccgaccc ggactatcgg acgatgcggg cgggcggcgc tggtacggag
     7981 tgggagccga cgtcgcaagc gtaagtgaaa caacgagata gcaacccacc cggcggcttc
     8041 ctcaagccgg gtccggcggt tatcattagc agtttccgag ctttcacgag cgcgaggacc
     8101 accgatgccg accgccacca ctacgtcccg gtttaccggc gttgattttt atgccttcga
     8161 taccctcctc agcgaagagg agcgggcaat ccgcgatacc gtccggtcct gggtcgatga
     8221 caacctgatg ccgatcatcg gcgactgtta cgtcgagggt cggtttccca aagaattgat
     8281 tccccagatg gcggagctgg ggttcttcgg cgccaacctg ccggaggagt acggctgtgc
     8341 gggactcaat aacgtcgcgt acgggctcat catgcaggag ctggagcggg gcgacagcgg
     8401 agtgcggagc tttgcttcgg tgcagggcgc gctggtaatg taccccatct acgccttcgg
     8461 gtcggaggag cagaagcgtc gttggctgcc ccggctcgcc tcggggcagg agatcggctg
     8521 cttcggtctg accgagccgg actacggctc caatcccgcc ggcatgatca ccacggcccg
     8581 ggagaccccg gacggctggg tcctgaacgg taccaagatg tggatcacca acggctccca
     8641 ggccagcgtc gcggtcgtct gggccaagac cggggatatt gacgacgtca ggagcattcg
     8701 cgggttcatc gttcccaccg acagcaaagg gttcagcgcc agggatcaga aggggaagct
     8761 gtcgctgcgg gcctcggaca cgagcgagct gcatctcgac gacgtgccgc tgcccaagga
     8821 cgccttgctc cccaagtcgg gcggcatcaa gagcccgctt tcgtgcctca cccaggcccg
     8881 ctacggcatt tcgtggggcg cgatcggcgc ggccatggcc tgctatgacg aagccgtccg
     8941 ttacgcccgg acccggatca tgttcgggaa gcccatcggt cagacccaga tccagcaggt
     9001 ccgcctggcc gacatgctga ccgagatcac caaggcgcag ttcctcaccc tgcagctggg
     9061 ccggctcaag gacgcaggca ccatgaaccc gcaacaggtc tccctcgcca agcgcaacaa
     9121 cgtcgacatg gccaccgaat gcgcccgcga atctcgccgc ctgctcggcg ccaacggcat
     9181 cctggcggag tatcactcca tgcgccacat ggccaacctg gaatcggtgt acacctacga
     9241 gggcacccac gacatgcact ccctgatcct gggccaggat atcacggggt tgagcgcatt
     9301 ctgagctttc caccagcgcc atctgcccgc tgaccactga cctgagcgcc accgtcccat
     9361 gaagatcgcc gtgtgcctca agcgcgtccc cgataccgag atgcgtttca ccatcgcgcc
     9421 ggacgggaaa tcgatcgacc ccgcgggcct caagtacgag atcagcacct ttgatgagta
     9481 cgcggtggag gtcgcgctcc ggctcaacga gcagcagggg cccggcgagg tgacggtcat
     9541 gggtgcgggc ccggacgggc tggccgaact gcttcgcaag gcgctcagcc tgggtgccga
     9601 tcgcgccgtc cacctgaccg ccgccgacgt gccgttcgac ggcatggccg tcgcgcaggc
     9661 cctcgcgagc gagctcgagg gccagcctta cgacgtgatc ctgttcggcc ggaacgccac
     9721 cgataccggc agcggcagcg tcggggccat ggccgccgag ttgctgggac tgccgtgtgt
     9781 gaccgcggtg atgcatctcg aggtccggga cggtcgcggc accgcgcaac gcacgctgga
     9841 aggggccacg gagacgatca ccttttccct gccggccgtg ctcaccatcg atgagggcat
     9901 cgcgagaccg cgcatcccct cgctcaaagg catcatggcc gccaagaaga agccgatgga
     9961 aacgcggccg gcgcagttcg gccccgtccg gctcaccgtc gagcggctgg agatgccgcc
    10021 tgatcgggcg gccggccgga ttctgggaac cggccccgac gcggttcccg agctggtgcg
    10081 ggttcttcgt gacgaagcaa aggtgctcta gatggccgac atcctggtac tggcggagac
    10141 ccgcggcggt ctcgcgcgga aggcggcctt cgagaccgtg accgcagccc gcgcggtagc
    10201 ggattcgacc ggtggcggcg aggtccacgc gctcgtggtc ggggggccgg gtgtggccca
    10261 ggtggccgag accttgggtc ggttcggcgc tgatgtcgta ctcgcgctgg agcacgaggc
    10321 gctggcgcac ggcaatcccg aggtgacggc ggctacgatg gcccagcggc tccggggcgg
    10381 tgcctatcgc ctggcgctct tctcagcctc ggcccaggga cgcgacctgg caccccgggt
    10441 cgccggcgcc ctgggtgtga gcctcgccgc cgatgtggtc tcgttcgaga tcacggggga
    10501 tgcggtcctg gcccgccatc cggtgtttat cggcaaggcc atcgcaaccc tgcggctgga
    10561 gggcagcccc gcggtcgtgt cgctccgtgc cggcgccgtc acgccggcgg agaaaccccg
    10621 ccccgcccgg gtggagtccg tgaccgcggc tctcgacccc ggcgcggcgc ggctggtggt
    10681 gaccgccgtc gaggcccggg gggcggccaa gctggatctg gccgacgcgc cggtgatcgt
    10741 gagtgggggg cggggcctca aagcggcgga gaatttcaag ctggtcgaag agctggccgc
    10801 cgcgttcggc aacgccgcag taggcgccac ccgggcggtt accgatgatg gctggcggga
    10861 ccccgccgat cagatcggcc agaccggacg ggtggtgtct cccggcctct atgtcgccgt
    10921 aggaatctcg ggagccattc agcatctggc cgggatgcgg gcgtccaagg tgatcgtcgc
    10981 catcaaccgg gacaaggacg cgcccatctt caaggtcgcg gactacggga tcgtgggcga
    11041 tttgttcgag gtcgtgcccc gtctcaccga ggaaatccgg aagctccgcg ccgaacactg
    11101 aatctccccg tgaccagacc cgagccggac ctgcgcgagc gcctgccgga ccttgcggcg
    11161 gacgcccgac gcctggcccg gctcaccctc gaggaagacg gccccgccga tctgacgacg
    11221 gcgatcgtcg gcccggtccc tcatcccgga accggcacca tcgagtttcg cggccgcggc
    11281 gttttggccg gacaggtcta tgccgatgcg gtggcccggg agctggattg cgaggtcacc
    11341 tgggaggccc gggagggaga gcaagtcacg gcccgtgcca tcgggcggat ccggggggat
    11401 cgggccgggc tgcttcgggt ggagcgtccg ctcctcaatc tgctgcagcg ggcctcgggg
    11461 atcgccagcc gcacccgcca gtacgtcgag ctcctggggg acaccccctg ccggttgctg
    11521 cacacccgga agaccgcgcc cgggctccgg ctgtttgatg tggccgcggt ggtcgcgggc
    11581 gggggcgccg tgcatcggct ggatctggcc cacaccgtga tgatcaagga caatcactgg
    11641 cggttgctgg cgcaggcaag acgctcgctc gacgccgcgc tgcggcaggc gcgggagcgg
    11701 ggcgcgttga gctgccaggt ggaggtcgaa agcgaggccc aggtgcgcct cgcctgtacc
    11761 gcaggagccg atcgcctgct gatcgacaac cagcgtcccg ccatggtgag agcctggagc
    11821 cagctggccc gaaccctgcg ctctgacatc gcgatcgagg ccaccggcgg catcacgctc
    11881 gagaatgtcc gcgacttcgc actggctggc gccgactacg tttctgtcgg cgggatcacc
    11941 cacagcccgc ccgccgccga catcgcactg gaactggact gagtcaaccc gggaacccag
    12001 gtgtcacgca tccatccgat ccgccaccag gcgccgctgc cgctggagcg tctgatccga
    12061 tcgcaggctc ccggcgccga cgcgatcccc ctggacgtgc tgttcgtggg cgcggggccg
    12121 gccgggctcg ccggggccat cgcgctggcg cgaatggccc gggatgacgg ttcgctgggc
    12181 gacgtcagca tcggcgtcct ggaaaaggcc gagtcgctgg gcgagcactg cctttccggg
    12241 gcggtggtca atccgcgcgc ttttcaggag ctgttccccg gcgttcccga agccgaactg
    12301 cccttccgcc agcgggtcga ccgcgaggcg gtgtacctcc tcaccgaatc gaaatcggtg
    12361 aagatcccga cgccgccgac gatgcggaat cacgggaact acgccgggtc gctctgcgaa
    12421 atcgtccgct ggatggggga gcaggccgag gcgctgggtg tcaatctctt ccccgggttc
    12481 ccggtcgagg cgctgctggt cgacggcggg agggtccagg gcgtgcgcac cacgccgacg
    12541 gggctggccc gagacgggtc acccggcaac cagtacgtcg aacccaccga gttgacggcg
    12601 cgggtgaccg tgctcagcga agggacccgg ggtaccctgg gacaggcctg gcgccaatgg
    12661 cagagtgtga cgtcgcccaa cccccagctg tttgcgctgg gggtcaagga agtgtggcag
    12721 gtccgccggc cgctcgaccg ggtcatccac acgttaggct ggcccctgcc tcgagacgca
    12781 ttcggaggaa ccttcctgta tccgctggga ccgtctcagg tggccctcgg cattgtggtg
    12841 gggctcgatt accgccaggc gtcgctcgat gtgcaccagc tgctgcagcg gatgaaactg
    12901 catcccctgt tccgggatct gctggagggc ggagaactcc tggagtgggg agccaagacc
    12961 attcccgaag gcggctacta cgccctgccg gaacggatgt cgggcgatgg cctgctgctg
    13021 gccggggaca ccgccggctt cgtcgacgtg ccgtcgctca aggggatcca ttacgcgatg
    13081 cagtccggca tgctggccgc tcgagccgcg ttcgcggccc tcaaatcggg cgacccgtcc
    13141 gccgcgaccc tgtcgcaata cgatcgggcg gtgcgcgaga gctacgtcgt ccgggacctg
    13201 tatcgcaccc gcaacatgcg gctggcgttc aaggacggtt tctatgtcgg aggattcaaa
    13261 gcggggctga tgacgctgtc gggtggcgcg ctgttcggcc gccgcatcgc catgcacgcc
    13321 gatgtcgagc aggaacgtga gatcggagcg gccgcgccgt tcccccccga caaccggctg
    13381 acgttcagca agctcgacgc ggtcttcaag tcgggcaacg ccacccgcga caccatcccg
    13441 tcgcatctca tcgtcggacc ggaggtcacc gccgaggtgg cggaattcta cagccacgtg
    13501 tgtcccgccg gagtctacga gcgcctgccg gacggcaccc tccgggtgaa cccgcccaac
    13561 tgcgtggatt gcaaggcgac cgatgtggtg ggaccgcgct ggatgccccg ggagggtggg
    13621 agcgggccga aataccgact catgtaaagc caagtactga gtactcagtc ctcagcactt
    13681 agtactggtg tcaagtgacc ggcgtgagct gcagcgtcgt gtacaccacg ttgtcgtcgc
    13741 tgcggctgcc gtcgaggtcg agctggatct cgatcggatg gccgtaggtc tggtcgtagg
    13801 tcgccgacag aaacaccgga tcgtcgtcca tcgcggcccg caccagcgcg aataaccccg
    13861 ggacatcggg atagagcgac acctggccac ttcccaccgg atcgccgctc gcggtaaagg
    13921 tccggctcac taccacccgg ttgcggacct ggatggtcac gtcgatttcg gatacctggc
    13981 agatgcactg acgcttgagc accatgtcgt aagaggcggg tccgctctcg ttccactgag
    14041 ccagagccgc cgtgtagatc tgctccgctg ggttcgggcc ggacgtgtcg gagcaggcgg
    14101 ctgaagccag gatcgaagcc gagaacagca gggggagacg ggccatcatt gggattccgc
    14161 cgcagcgcgg cctaccgagt gaatgaaatc cgtccgcgat cagcgggcgg tcagcacgac
    14221 aaaatcggtg atatggtagg atacctcgtc gtccacgacc cccgccaccc agtcgatctg
    14281 gatcgattca gggtagccat aggccgggtt gtatcgcacg gcgaggccgg ccgcgggggc
    14341 gtggatggct tcttcgatca agtcgaacag tccgggtacc gccgcaaaga ggtcggcaaa
    14401 ctggggatc
//
LOCUS       DASWKS010000063        10916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_769302, whole genome shotgun sequence.
ACCESSION   DASWKS010000063 DASWKS010000000
VERSION     DASWKS010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10916
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769302"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VGA78_02155"
     CDS             complement(<1..630)
                     /locus_tag="VGA78_02155"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9892690.1"
                     /translation="MPDLDLESKLKVLMSLAADDREGLPPPPRLRHVNDVGALGPVNI
                     RNLRPTPGIKMRLLRILMTNACSFNCHYCPMRRDREMARTLLKPEELVRIFMGALQRG
                     WCEGLFVTTGIPGRPVPVMDQLIKALTLLREKHRFAGYIHVKLVPGADPAQIDRLTSL
                     ASRVSLNFEAACGATLAEIAPDKNWDVTRRNFEQVRSLVVREREARDHGR"
     gene            733..1863
                     /locus_tag="VGA78_02160"
     CDS             733..1863
                     /locus_tag="VGA78_02160"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9892691.1"
                     /translation="MRSLVLALIASVGAASNAAAQLGLVPFDVRMPKAPVPFAADGKV
                     HLVYELRVTNIARQDRGVQRVEALVGNGVVGSWWGDSLKAIALRVGEAAVGVDARVLP
                     GGRQALLYLMVSLPAGSTPSSVAHRFYLTHPDSLSGPARDTLNGPTVPVEAGSPVSIA
                     SPLKGGPWLAANGPGNLSGHRRTVIPIQGLGRIAQRFATDWIKLGPDGRLWKGDSTRN
                     ENWFGYKEPLLAVAEAVVVAVKDSIPENVPLSPQRTVPITLETVGGNHVILDLGGGRY
                     AFYAHMVPGSITVKVGDRVRPGQVIGLLGNSGNSDAPHLHFHVGDMPSPLGTEGLPFV
                     IDGYEKLGMAQANFLAGWSSTAPAAPRRGELPLQNHVVRFKP"
     gene            complement(1965..2930)
                     /locus_tag="VGA78_02165"
     CDS             complement(1965..2930)
                     /locus_tag="VGA78_02165"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9892692.1"
                     /translation="MTRTAQLTDHRPHWLAASLMTLALAACGGTDGPETASNDVVQTP
                     GSATPVVPTSITTAVAVRETTPAAPRVVTYEDAEAVFQAGNYSEAKALFTVYVESKPE
                     NPWGHYMLGLSSWKSGDLTGAERALDLAIKRDPKHVKSLINSARVLLDLGRGAEALER
                     INTARTLDSTSSDVLRLLARAQYAKGDVPSAVKTYHQVLVTDERDVWAMNNLGVLYIE
                     QNDAQSALAPLARAVQLKPTSPVFQNNLGMALELTGHLAEARVAYDNAVKADSTFGKA
                     VRNAKRLSEMTVDPTAPGLDVKEFAELFRQYVRMWRDSIPTTPDL"
     gene            complement(3663..5012)
                     /locus_tag="VGA78_02170"
     CDS             complement(3663..5012)
                     /locus_tag="VGA78_02170"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9892693.1"
                     /translation="MSRILVVDDVAALAEQYAYDLRRLGGHEVSVAASGKGALEALER
                     DGADCVILDLEMPGVDGFEVLRRLKHQGIDTPVIVYTGTGDYDRCIQAIRLGAMGFID
                     KAEPMERVNQEVVSAVERHRLRREVFALQRRLGESSVLLGVSNAMARLRDVIARIAPI
                     PSTVLILGESGTGKELVARELHRLGKNPAGPFIAINCAALPEQLVESELFGHERGAFT
                     GAVAQRKGAFEVAAGGTLFLDEVGELPPAVQAKLLRALEGDQIQRVGATHPVTVDARV
                     VAATNRDLDAEVKRGGFREDLLYRLNVHTIEVPPLRDRREDIALLAERFLDETSRRFG
                     VLPRRLSGEAKELLVGYDWRRNNVRELRNMVERMVVTADGETIRAEHVPPAIRGDDAP
                     TDSPRSFQDLKTEAERAIILAALERHEWHVTRTAEALDLADHASLLKIMRRLDIRRE"
     gene            complement(5009..6658)
                     /locus_tag="VGA78_02175"
     CDS             complement(5009..6658)
                     /locus_tag="VGA78_02175"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9892694.1"
                     /translation="MIFRTRLAIGFVTAAIIPLALFGFVVRREMTARLDAQATRRVEA
                     LVGVLRADLAAETSTLRTRLRTLAAGVAAENRFRLATGAGGITERRWLLDWAGEAMAG
                     SGLAVLRVMDSAGRVLSSGHFRNEFDRLDSPLPAAIALANGQPMLIRLPAPDGDVMAL
                     AAMDSFTVAGRHYRLVGGLPFDAARAASLVPQDEIAVALVPGEAAAPNVAAEIALPLW
                     DAIAGSGSTARLVVTRDPAPMKELRTRVDRWLAIAAGLTLLLAGVLAVGMAARVSRPL
                     ADLAEKTSRLDLDRLDQDFASDRRDEIGALGNLLSEMTGRLRTSTSRLREAERRAATG
                     DLARQINHDVKNGLAPIRHVLRHLSETAARHPEQLAAVFADRRETLESSVTYLEGLAR
                     NYARLAPALDRGSSDLGALLQEVARGSRADGVEFEVRLGENLPPVRADAVVLRRIVEN
                     LVSNAVDALEGRPGRVTLSSEAVPNGSEPRVRLTVADTGRGMTAEELDRAFDDFHTTK
                     TSGTGLGLSVVRRLVGDLGGTLRVDTSPGQGSTFMVEILAL"
     gene            complement(6655..7491)
                     /locus_tag="VGA78_02180"
     CDS             complement(6655..7491)
                     /locus_tag="VGA78_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892695.1"
                     /translation="MRDTISVALPASDASRFLVAHLTDSASVDCEGHPISTRRGGYRL
                     GSSNPTILLSSDSTAPVILLHDIQPGTDPRDLIDRRVDLVITADPVTLDYARTQRDLR
                     LVPLAWSVTYTLVSSPGQAPPLEPSDGFRAELAHDAVRAEARPAERPERRDVEGGCTV
                     QSPRPAVRLPDIAIPRNDPIARALAERLVAVAAPSGPRRVTALPPAGLDSALTHGTAM
                     AYIVPLSRVRPTECAGTYPLPRGSSLFPLIDVRATAVLRPGVPPFFIEGDGTIRFPSR
                     QP"
     gene            complement(7598..7792)
                     /locus_tag="VGA78_02185"
     CDS             complement(7598..7792)
                     /locus_tag="VGA78_02185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892696.1"
                     /translation="MGMLRFQDPVTTVDQLLALPDDGLRHELLDGEHVVTPAPAYRHE
                     PLLEIPVRDLFADLPEPGDQ"
     gene            7870..8160
                     /locus_tag="VGA78_02190"
     CDS             7870..8160
                     /locus_tag="VGA78_02190"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX9892697.1"
                     /translation="MSPARDPFDPLDGPITDELDLHRMTAPEAKAAVTGFVRRAPKGA
                     LLHVITGKGRNSAGGPVLRNTIRAMLRAGSMPQVRAWASDDNEGGFLIRIAN"
     gene            complement(8203..8619)
                     /locus_tag="VGA78_02195"
     CDS             complement(8203..8619)
                     /locus_tag="VGA78_02195"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9892698.1"
                     /translation="MLDEVLLPERLGILLVGLCSSLAAIVAAVGIAAAVAYAVGRHRR
                     DLALRIALGAAPRRALRAVLGPTFTHLGVGMGLGLLGGAALGRVLAGVVYGLEGIEPL
                     TLVLVTLGLAVIATVAALLPARKALRLDPMTELRSD"
     gene            complement(8631..9056)
                     /locus_tag="VGA78_02200"
     CDS             complement(8631..9056)
                     /locus_tag="VGA78_02200"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEX9892699.1"
                     /translation="MAWALDDLIRIPIINRRIGLDPLLGLVPGAGDTVAALMAVTTLT
                     AALKRGVPGIIIARMGINIGLDYLIGLVPLIGDLGDFGFKANRRNLALLRRHATEIRK
                     SSWRDYVVVGGVLGGLGALFVGGIWLGFLGLRSLLRRLG"
     gene            complement(9149..9838)
                     /locus_tag="VGA78_02205"
     CDS             complement(9149..9838)
                     /locus_tag="VGA78_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892700.1"
                     /translation="MPSDKDFKRLVRGRMQKTGESYTAARATLLKKPPRKAPVSPPAV
                     PDYAKLAGMSDAAVEAKTGCNWAKWVWALDYLKAYTWTHREIAEYVHEKYQVPDWWSQ
                     TVTVGYERIRGLRDIGQRRGGSYEASRSKTVAVPVARLYRAFADGRVRNRWLPGVTLK
                     VRKATPNKSVRITWADDTSVEVWFIAKGDAKASAAVSHRGLTGKEDVARVKAYWGERL
                     DALADVLTGVN"
     gene            10108..10740
                     /locus_tag="VGA78_02210"
     CDS             10108..10740
                     /locus_tag="VGA78_02210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892701.1"
                     /translation="MRRALVLAVLALPQGLLGQRTIVGNRLVSPALPKATLEIAAELR
                     YAGTQTFDLYGVATAEQHLFVALDGDRITRLLWVQFEGYHDSNSNTYNYRDSTLTHSG
                     QTWHRRINAVRVPETESRPQSDGARVRAFLRSKGWTLGPDILSERLVWLLDSPARNEL
                     MVIYMEDLAEQGYAAADLNEGGKGRAFWPGVAQTFHERALASFKVTGARP"
BASE COUNT         1793 a         3644 c         3706 g         1773 t
ORIGIN      
        1 cctgccgtgg tcccgcgcct ctcgttcgcg caccaccagt gaacgcacct gctcgaagtt
       61 ccgccgagtg acgtcccagt tcttgtccgg tgcgatctcg gccagggtag ccccgcacgc
      121 cgcctcgaaa ttcagcgaca cccggctggc cagtgaggtc agccgatcga tctgcgccgg
      181 gtccgcgccg ggtaccagct tcacgtggat gtagccggcg aaccggtgct tctcgcgcag
      241 cagcgtgagg gccttgatca gctgatccat cacgggaacc ggtcggcccg ggatgccggt
      301 ggtcacgaag agcccttcgc accagccgcg ctggagcgcg cccatgaaga tccgcaccag
      361 ctcttcgggc ttgagcagag tgcgggccat ttcccggtcg cgccgcatgg ggcagtagtg
      421 gcagttgaag ctgcaggcgt tggtcatcag gatgcggagc aaccgcatct tgatgcccgg
      481 agtgggccgg aggtttcgga tgttgaccgg acccagggct ccgacgtcgt tcacatgacg
      541 caggcgggga ggcgggggga gtccttcgcg gtcgtcggcc gcgagtgaca tgagtacctt
      601 gagcttggat tcgagatcca gatcgggcat gagggcgcca tatgaacgac accccaccat
      661 accgaataaa taccgaaagt caatggcatc ggcagccact cggatgaccc gtccttgcct
      721 gggagttttc agatgcgatc tctggtgctg gcactgattg cttcggtggg agctgccagt
      781 aacgccgccg cccagctcgg cctggtgccg ttcgacgtgc ggatgccgaa ggcgccggtc
      841 ccattcgccg ccgacggcaa ggtgcatctg gtgtacgagc tccgggtgac caacatcgcg
      901 cggcaggatc gcggggtcca gcgggtcgag gcgctggtgg gcaacggcgt ggtcgggagc
      961 tggtggggcg acagcctcaa ggcgatcgcg ctcagggtag gtgaggcggc cgtcggcgtg
     1021 gatgcacggg tgctgccggg gggacgtcag gcgctgctgt acctcatggt ctcgctgccg
     1081 gccggatcga cgccgagctc ggtggcgcac cggttctacc tgacccatcc cgactcgctc
     1141 tcgggcccag cccgcgacac gctcaacgga cccacggtgc cggtcgaggc tggatccccg
     1201 gtgtcgatcg cctcgcccct caaaggcgga ccctggctcg cggccaatgg acccggcaac
     1261 ctgtcgggcc accgccgcac cgtgatcccg atccagggcc tgggacgcat cgcccaacgg
     1321 ttcgctactg attggatcaa gctcggcccc gacggccggc tctggaaagg cgactcgacc
     1381 aggaatgaga actggttcgg ctacaaggag ccgttgctgg cggtggccga agccgtggtg
     1441 gtggcagtga aggacagcat ccccgaaaac gtgccgctct caccgcaacg gaccgtgccg
     1501 atcacgctcg agaccgtggg cgggaatcac gtgatcctgg acctgggtgg gggccgctac
     1561 gctttctacg ctcacatggt gccgggatcg atcacggtca aggtgggcga ccgggtccgt
     1621 cccgggcagg tgatcggcct gctgggcaac tcgggcaact ccgacgcgcc ccacctgcac
     1681 ttccatgtag gcgatatgcc gtcgccgtta ggcaccgaag ggctgccgtt cgtgatcgac
     1741 ggctatgaga agctggggat ggcgcaggcc aacttcctgg caggctggtc ctccaccgct
     1801 cccgccgcgc cgcgccgggg cgagttgccg ctccagaacc acgtcgtgcg gttcaagccg
     1861 tagcgtccgt cggtccgtcg gtccgtcggt ccgtcggtcg tgaatccgtg taatccatgg
     1921 acgcctttta tccacagatt acacggatta atcgctgcga tcggttagag atccggcgtg
     1981 gtggggatcg agtcccgcca cattctcacg tactgccgaa acaactcggc gaactccttc
     2041 acatccagcc ccggcgcagt ggggtcaacg gtcatctcac tcagccgttt ggcgttgcgc
     2101 accgccttgc cgaaggtgct gtcggccttg accgcgttgt cgtaggcgac gcgggcctcg
     2161 gccaggtggc cggtcagctc gagtgccatg cccaggttgt tctggaacac cggtgaggtg
     2221 ggcttgagct ggacagcgcg ggccaaaggc gccagcgccg actgggcgtc attctgctcg
     2281 atatacagca cgcccaggtt gttcatggcc cagacatcgc gctcatcggt caccagcact
     2341 tggtggtagg tcttgaccgc cgaggggacg tcgcccttgg cgtactgggc ccgcgccaac
     2401 agccgcagca cgtccgacga ggtcgagtcg agggtgcgcg cggtgttgat ccgctccagc
     2461 gcttcggcgc cgcggccgag gtccaacagc acccgggccg agttgatcag gctcttcaca
     2521 tgcttcgggt cgcgcttgat cgccaggtca agcgcgcgct cggcgccggt caggtcacca
     2581 ctcttccagg acgagaggcc cagcatatag tggccccacg gattctcggg cttcgactcg
     2641 acgtacaccg tgaagagcgc cttggcctcg ctgtagttcc ctgcctggaa caccgcctcg
     2701 gcgtcttcat aggtgacgac ccgcggcgcc gcgggcgtgg tctccctcac cgccacggcg
     2761 gtggtgatac tggtcgggac caccggcgtg gcagagccgg gagtctgaac cacatcattc
     2821 gatgcggttt cggggccgtc tgtgccgccg caggcggcga gcgccagggt catcaatgag
     2881 gcggccagcc agtgtgggcg gtggtcggtg agctgcgcgg tgcgggtcat gtcgtcctcc
     2941 tcggggttgg gcgccccggt cgccggatga gttcatcggg gtcaccaggg aggaggggca
     3001 aggacggcgc ccgggacggt agatcgaaac agcctttggc agtaagcggt tagccgagga
     3061 ggggagaagc tattgtgtcc ggtcggacac ccgggcgggc tttcgggcgt gtccgggcgg
     3121 actcatcggg ccggcatcaa ggacctaagg ttgcttcgga tggggcggat caagcggatc
     3181 tttttttggg ctcttcaagg aattgcgggg aacgccgcgc ggatcctcaa aaccaaactg
     3241 caaaaagcat ccgccgatga cacggattat ggggatgaca cggatttcac tagctcagag
     3301 aggcatgcct accggattga tcctgactcg agtccgtgtc atcccagtga atccgtgtca
     3361 tccgtggaag ctttattgtc cctcttcaag agttcaccaa ccgcccggac ccgaaattcc
     3421 gagaagaacc tttttttgtg ggcgcttttt ctggtttcgg tgtttgggat ccgttcagcc
     3481 acaatgcggg atcttcggac atagaccacc aaaaaaggat ccgcccgatc cgctgcatcc
     3541 gaagcatccg cgtcgaaccg ttgatccctg atggtcgcct ggagcagatc cttcggtcgc
     3601 gttgcgacct caggatgacg gaacggctag cgttgcgacc tcaggatgac ggaatggctc
     3661 ccctattctc gccggatgtc caggcgacgc atgatcttga gcaggctggc gtggtcggcg
     3721 agatccagcg cctccgcggt gcgggtgacg tgccactcgt gccgttccag ggccgcgagg
     3781 atgatggcgc gttcggcttc ggtcttgagg tcctggaacg agcggggtga atcggttgga
     3841 gcgtcgtcgc cccggatggc gggcggcacg tgctcggcgc ggatggtctc gccgtcggcc
     3901 gtcaccacca ttcgctccac catgttgcgg agctcacgca cgttgttccg cctccagtcg
     3961 tagccgacca gcagttcctt ggcctcaccc gacaatcgcc gtggcagcac cccgaatcgg
     4021 cggctggtct cgtccaggaa ccgctcggcc aggagcgcaa tgtcttcccg tcggtcccgc
     4081 agcggcggga cttcgatcgt atggacgttc aggcggtaga gaaggtcctc ccggaatcca
     4141 ccacgcttga cctccgcgtc cagatcacga ttggtggctg cgaccacccg cgcatcgacc
     4201 gtgaccggat gagtggcgcc gacccgctgg atctggtccc cctccagcgc gcggagcagc
     4261 ttggcctgaa ccgccggcgg caactcgccc acctcgtcca gaaacagggt accgccggcg
     4321 gcgacttcga aggccccctt ccgctgggcc acagcgccgg tgaacgcacc ccgctcatga
     4381 ccgaacagct cgctctcgac cagctgctcc gggagcgccg cgcaattgat ggcgatgaag
     4441 ggtccggccg ggttcttgcc cagccggtgc agctcgcgcg ccaccagctc tttgccggtc
     4501 ccgctctccc ccaggatcag gaccgtgctg gggatgggcg cgatccgggc gatcacatcc
     4561 cgcagtcggg ccatagcatt actcacgccg aggagcacgc tgctctcgcc caggcgccgc
     4621 tgcagcgcga agacctcgcg ccggagccgg tgccgctcga cggcgctcac cacttcctgg
     4681 ttcacccgct ccatcggctc ggccttatcg atgaacccca tggcgccgag ccggatcgcc
     4741 tggatgcagc ggtcgtagtc gccggtgccg gtgtagacga tgaccggtgt gtcgatgccc
     4801 tgatgcttga gccggcggag cacctcgaag ccgtcgacgc cgggcatctc caggtcgaga
     4861 atgacgcagt ccgcgccgtc ccgttccagc gcttccagtg cgcccttgcc ggatgcggcg
     4921 acgctgacct cgtgcccgcc cagccgcctg aggtcgtagg catactgctc cgccagcgcg
     4981 gcgacgtcgt ccaccaccag gatgcggctc atagcgcgag aatctccacc atgaaggtgc
     5041 tgccctgacc gggactggtg tccacccgga gggtgccgcc gagatcgccg accagccggc
     5101 gcaccaccga aaggcccagg ccggtgccgg acgtcttggt ggtgtggaag tcgtcgaagg
     5161 cccggtccag ctcctcggcg gtcatgccgc ggccggtgtc ggcgaccgtc agccggaccc
     5221 gcggttccga gccgttaggc acggcctcgg aggataacgt cacccgtccc ggccggccct
     5281 ccagggcgtc gaccgcgttg ctcaccaggt tttccacgat gcggcgcagc acgacggcat
     5341 cggcccgcac cggcgggagg ttctcgccca ggcggacctc gaactccacg ccgtcggcgc
     5401 gggacccgcg ggccacctcc tgcaacagcg cgccgaggtc gctggaacca cggtcgagtg
     5461 ccggcgccag tcgggcgtag ttgcgggcca gcccttcgag ataggtgacg ctggactcga
     5521 gggtctcgcg ccggtccgca aacaccgccg ccagctgttc cggatgccgg gccgccgttt
     5581 ccgagaggtg ccgcagcacg tggcgaatgg gagccagccc gttcttcacg tcatggttga
     5641 tctgccgggc caggtcgccg gttgcggccc gccgctccgc ctcccgcagg cgggacgtac
     5701 tggtccggag ccggccggtc atctcggata gcaggttgcc gagggcgccg atctcatcgc
     5761 gtcggtcgga ggcgaagtcc tgatccagcc ggtccaggtc gagccggctg gtcttctcgg
     5821 ccagatcggc caagggacgc gagacccggg ccgccatccc gacggcgagc accccagcca
     5881 gcagcaaggt cagccccgcc gcgatcgcga gccagcggtc gacccgggtc cgcagttcct
     5941 tcatgggcgc gggatcccgg gtgacgacca ggcgagcggt tgacccggaa ccggcgatcg
     6001 cgtcccacag cggcagagcg atctcagccg cgacgttagg cgctgccgct tcacccggca
     6061 ccagcgcgac cgcgatttcg tcctgaggta ccagcgaggc cgcgcgggcc gcgtcgaagg
     6121 gcaggccgcc gaccaggcga tagtgccggc cggcgacggt aaacgaatcc attgccgcca
     6181 gcgccatcac gtctccgtcg ggagcgggga gacggatcag catgggctga ccgttcgcca
     6241 gggctatcgc cgcggggagg ggggaatcga ggcgatcgaa ctcgttgcgg aaatggcccg
     6301 agctgagcac ccgtcccgcc gagtccatca cccgcagaac cgcgaggcca ctgccggcca
     6361 tggcttcacc ggcccagtcg aggagccagc gtcgctcggt gatcccaccg gcgccggtgg
     6421 ccagccggaa tcggttctcg gccgccacgc cggcggccag ggttcggagc cgagtccgca
     6481 aggtcgaggt ctcggcggcc agatcggccc gcaggacccc gaccagcgcc tccacccgtc
     6541 gggtcgcctg agcatcgagc cgcgcggtca tctcgcgccg taccacgaaa ccaaacagcg
     6601 ccagcgggat gatcgccgcc gttacgaacc caatggccag ccgggtgcga aagatcatgg
     6661 ctgccgcgac ggaaatcgga tggtcccgtc accttcgatg aagaatggcg gcaccccggg
     6721 acggagcacg gcggtcgcgc ggacgtcgat cagcggaaac aagctggagc cgcgcggcag
     6781 cggatacgtc ccagcgcact cagtgggccg aacccgggac agcggcacga tgtacgccat
     6841 ggcggtccca tgggtcaacg ccgagtcgag cccggccggg ggcagggcgg ttacccgccg
     6901 cggcccggaa ggggcggcaa cggcgaccag tcgttcagca agcgcacggg cgatgggatc
     6961 gttccgggga atcgctatgt cagggagacg aacggcgggg cggggtgact gcacggtgca
     7021 gcctccctca acgtcccgcc gctcaggtcg ctccgccggc ctggcttcgg cccgaacggc
     7081 gtcgtgggcc agctcggcgc ggaatccatc cgagggctcg agtggagggg cctggccggg
     7141 ggaggacacc agggtgtagg taaccgacca ggcgagcggt accaacctga gatctctttg
     7201 cgtccgggcg tagtcgagcg tcacgggatc ggccgtgatg accaggtcca cccggcggtc
     7261 gatcagatcg cgcgggtcgg tgcccggctg aatatcgtgg agcaggatga ccggagcggt
     7321 ggagtcggag gagaggagga tggtcgggtt gctggagccg agccgatacc ctccccgccg
     7381 ggtcgagatg ggatgacctt cgcagtcgac ggacgcagag tcggtgaggt gcgcaaccag
     7441 gaaccgggag gcatcggatg cggggagcgc caccgagatg gtgtcgcgca tcagggaatc
     7501 gggtgccgcc acgtagcaag ggttgctgac cggaagaacc tcgggcggcc tcgcagcgcc
     7561 gccacaggcg gcgaggacca gggcgagcgg cgccggccta ctgatcgccc ggctctggca
     7621 gatcggcaaa gaggtctcgg accggaatct cgagcagcgg ctcgtgacgg taggctggag
     7681 cgggggtcac gacgtgctcc ccgtccagga gctcgtgccg cagcccatcg tcgggcaggg
     7741 ccagcagctg atccacagtc gtgaccggat cctggaaacg cagcataccc ataatgtgtg
     7801 tcctctcgat acgaagcagc aactcggcat cccggcttag gttctaccca tgcctgtaga
     7861 gcgggatgaa tgagcccagc acgcgatccc ttcgaccctc tcgacggtcc gatcaccgac
     7921 gagctggatc tgcatcgcat gaccgctccc gaggccaagg cggcggtgac ggggttcgtg
     7981 cggcgcgcac ccaaaggggc tttgctccat gtcatcacgg gaaaggggag aaactcagcc
     8041 ggcggtccgg tcctgcggaa taccattcgc gccatgctgc gggcggggtc catgcctcag
     8101 gtgcgagcgt gggcctcgga tgacaatgag gggggatttc tgatccgaat cgctaactga
     8161 ctacaggcgg tcagtcggtc ggtcggtcgg tcggtcagtc agtcagtcgg atctcaactc
     8221 ggtcatcggg tcgagccgga gggctttcct cgccggcaac agcgccgcga cggtcgcgat
     8281 gacggcgagc ccaagcgtca ccagcaccag cgtcagcggc tcgattcctt ccagaccgta
     8341 gaccacgccc gccagcaccc ggcccagcgc ggcgccaccg agaagaccga gccccattcc
     8401 gacgcccagg tgggtgaagg tgggtcccag cacggcgcgc agggcgcggc gtggcgcggc
     8461 gccgagcgcg atgcggagcg ccaggtcgcg ccggtgccgg ccgaccgcgt aggcgacggc
     8521 ggccgctatc cccacggcgg cgacgatggc cgcgaggctg ctgcagaggc ccaccaggag
     8581 aatgcccagc cgctccggca gcagcacctc gtcgagcatg cagacactcg ttaccccagt
     8641 cggcggagta gactcctcag tccgagaaag ccgagccaga tcccacctac gaacagggcg
     8701 ccaagcccgc ctaacacgcc tccgacgacc acataatccc tccaagacga cttccggatc
     8761 tcagtagcgt ggcgtcggag caaggcgagg ttccggcgat tggccttgaa cccgaaatcg
     8821 cccaggtcac cgatcagcgg aaccaggccg atcaggtaat ccagtccgat gttgatcccc
     8881 atccgcgcga tgatgatgcc ggggacaccc cgtttcaggg cggcggtgag cgtcgtcacg
     8941 gccatgagcg cggccacggt gtcgcccgct cccggcacca gtcccagcag cggatcgagg
     9001 ccgatccggc gattgatgat gggtatccgg atcaggtcgt ccagggccca ggccacccgc
     9061 tccagccaga ccaggtcctg ggggacggcc gggtcgtggg gtgggcccga cggcggcccg
     9121 ccctccgagg ggttcgcggg attcgggatc agttgacccc ggtcagcaca tcggccagcg
     9181 cgtcgagccg ttcgccccag taggccttga cccgggccac gtcctccttg ccggtgagcc
     9241 cgcggtgcga caccgcggcc gaagccttgg cgtcaccttt ggcgatgaac cagacctcga
     9301 ccgaggtgtc gtcggcccag gtgatccgca ccgacttgtt aggcgtagcc ttccgcacct
     9361 tgagcgtgac gcccggcagc cagcggttcc ggacccgccc atcggcgaag gcgcggtaga
     9421 gcctggccac cggaacggcg accgtcttgc tccggctggc ttcgtagctg ccgccccggc
     9481 gctggccgat gtcccgaagg ccccggatcc gctcgtagcc caccgtcacc gtctggctcc
     9541 accaatccgg tacctggtac ttctcgtgca catattcggc gatctcgcgg tgggtccagg
     9601 tgtaggcctt caggtaatcg agggcccaga cccacttggc ccagttgcag ccggtcttcg
     9661 cctcgaccgc ggcgtcgctc atgccggcga gcttggcata atcgggaaca gccggcggtg
     9721 aaaccggcgc cttgcgaggt ggcttcttga ggagagtggc gcgggcggcg gtgtaggatt
     9781 cgcccgtctt ctgcatgcgc ccgcgaacca ggcgcttgaa gtccttgtca gacggcatcg
     9841 tgaggctcct ttggtcgggc cacgggccat ccccccagcg gcgagcccgt ggcgacacaa
     9901 aggctcggat gccgatccgg gagtctgccc ccctttgcct ctcggaagga cccctgctgg
     9961 ggagggatcg aagaggttgg gcgtggatct ccgcccgtgc tcaacgatgc gatacggccg
    10021 gcaattctgc aagaccggcg cgtacctgct ggagaaacac ccacctcacc tgcctcgtag
    10081 gggtggcact ccgaccgggc cttcaacgtg cgtcgtgctc ttgtgctcgc cgtgctggcg
    10141 cttcctcagg ggctgctggg acagaggacc attgtcggga atcgactggt ctctcccgcc
    10201 ctccccaagg ccactctcga aatcgcggcc gagctgcgtt acgccggcac ccagacgttc
    10261 gacctgtacg gcgtcgccac cgctgagcag cacctgttcg tcgccctgga cggcgaccgg
    10321 atcacccggc tgctgtgggt gcagttcgag gggtatcacg actccaacag caacacctat
    10381 aactaccgcg acagcaccct cacgcattcg ggccagacct ggcaccggcg gatcaacgcg
    10441 gtgcgcgtcc cggagacgga atcccggccc cagtcggatg gcgcccgggt ccgggctttc
    10501 ctacgctcaa aaggatggac cctcggcccc gacatcttga gcgagcggct ggtgtggctg
    10561 ctggactcgc ccgcccggaa cgagttgatg gtgatctaca tggaagacct ggccgaacag
    10621 ggctatgctg ccgcggacct gaatgagggg ggcaagggtc gcgcgttctg gcccggggtg
    10681 gcgcaaacgt tccacgagcg ggcgctcgca tcattcaagg tcaccggggc tcgtccgtga
    10741 cttccctgaa taccgccgcg taccttcacg tacccgccac cgggaaaact cgtgacccac
    10801 ctgctacgcg atatccgctt tgccttgcgt ggcttccgct cggcgccggc cgccaccgtc
    10861 gtgaccgctc tgactatctc gctcggcgtc ggcgccacgg ccacggtgct gagcgt
//
LOCUS       DASWKS010000064        14163 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_400504, whole genome shotgun sequence.
ACCESSION   DASWKS010000064 DASWKS010000000
VERSION     DASWKS010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14163
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400504"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..472)
                     /locus_tag="VGA78_02215"
     CDS             complement(56..472)
                     /locus_tag="VGA78_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEX9892702.1"
                     /translation="MPEPKTRPTTASVAAFLGTIRQSERQRDARTVAAMMRAATGARA
                     TMWGPTIIGFGRHPITGSTGRATEWPIAAFAPRSTGLVLYFMADFLANNPLLPRLGKY
                     RVGKSCLYIRRLADVDLPTLRLLVASSVQAVQAQGR"
     gene            complement(914..1198)
                     /locus_tag="VGA78_02220"
     CDS             complement(914..1198)
                     /locus_tag="VGA78_02220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892703.1"
                     /translation="MSETVFLMALAMAAITLIVSVKAIAGAISGRMSRSEIAQLRAQL
                     DQQATALEDSQNSFASQATQLAELQERVDFTERLLAQNRDRIALPGEKRE"
     gene            complement(1665..2642)
                     /locus_tag="VGA78_02225"
     CDS             complement(1665..2642)
                     /locus_tag="VGA78_02225"
                     /inference="COORDINATES: protein motif:HMM:TIGR01250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HEX9892704.1"
                     /translation="MNLSSGFPRLVILLAGACAPADQTSLEPGSGFIPVGAGRVWYEV
                     AGEGPGTPVLLIHGGPGGRSCRLARLKGLGADRPVILYDQLGTGRSDRPTDTTLWRLP
                     RFVEEIDSIRAHLGLTRLHLYGHSWGATVALEYALTRPGSGIQSVTLSGPLVSTPRWI
                     ADGDTLRQQMPADLQRTLREHEAAGTVDSPAYRAATDSFYARFMSRRQPPAPAIECEG
                     VTGNDSVYRYMWGPTEFHATGTLRDHDRTDRLGELTLPVLFLAGEFDEARPPTVRGFA
                     EKVPGARFEVITGAGHAFPNDEPEQTIRIVGAFLRQTDSAAPASSEKRD"
     gene            2679..3065
                     /locus_tag="VGA78_02230"
     CDS             2679..3065
                     /locus_tag="VGA78_02230"
                     /inference="COORDINATES: protein motif:HMM:NF015893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HEX9892705.1"
                     /translation="MPKPGAGRVMEVQIFGTRKSPATRSALRFFAERRIRTHFVDLME
                     RAASPGELRRFAQKFGVRELIDREGRRFAELGLGPASHGEERWLELLAAEPLLLKQPL
                     VRNGNLLTIGESPTTWSEWIARAATA"
     gene            3152..3427
                     /locus_tag="VGA78_02235"
     CDS             3152..3427
                     /locus_tag="VGA78_02235"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HEX9892706.1"
                     /translation="MKQREDRADESDPGRDLEEDAEVELETGRGLHAEAQVICPYCGE
                     AVEITLDPGGGLIQEYVEDCQVCCRPWQVHVRYEASGGAEVWIEEAQ"
     gene            3449..4855
                     /locus_tag="VGA78_02240"
     CDS             3449..4855
                     /locus_tag="VGA78_02240"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9892707.1"
                     /translation="MRLVLALLLLMRADAPTADQTQAPPIVITHVNLVNPETGAVRAN
                     QTMVITGDLIRAVGNSDAVPVPRGAREVDGRGGWLIPGLWDMHVHLGMSGRPSLALLV
                     ANGVTGVRDMGGTGDQVRAWRDSIAAGALLGPRIEMSGPIVENARWLNAVMRFALQRG
                     DSNLIRELNGRIAVATPEEARAAVERIAATGATLVKVRTNPPAPAYFALLREAKARGL
                     RVVGHPPERGPSLADASDSGQASIEHLLFRFRDGTWMVTLEALSPAERSDLLGRLRRN
                     RTALVPTLIAGVGFRRMPDSMALALITDSSGALDPRRRFVSPALAERWRRQIEMKQDE
                     GAQPDWNALALRASPYLRALDSAGVTILAGTDLGTPLTYPGFGLHDELALLVREGGLT
                     PAAALRAATIGPARFFGREREVGTITAGMRADLVLLTGNPLADVTNVGKIRAVVLGGR
                     LLDRKELDGLLADVAAGH"
     gene            complement(4826..5461)
                     /locus_tag="VGA78_02245"
     CDS             complement(4826..5461)
                     /locus_tag="VGA78_02245"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEX9892708.1"
                     /translation="MQVGILIFDGVEVLDFAGPFEVFSRTRLVPGIDSRRNEDSAPFH
                     PFTVAVRPGPVTATGGLRVLPYSDITADPPIDLLVVPGGFGTRALLSETTVLDWIRRT
                     AKRAQRVTSVCTGSLLLARAGLLAGRRATTHWGALDLLASLDPTITVERGQRVVEDGI
                     ITSAGVSAGMDMALSVVEALHGPEVADETARYIEFPRGSTSVSVAGSNIRQ"
     gene            complement(5467..6198)
                     /locus_tag="VGA78_02250"
     CDS             complement(5467..6198)
                     /locus_tag="VGA78_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015880361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9892709.1"
                     /translation="MSPILQQVELLREKVADWRAYPFSIPAVAHLQRLALHPGVTFLV
                     GENGSGKSTLLEAIAIKAGFNPEGGSKNFTTSNRPSESSLHQYLRLVRGPRREKSGFF
                     LRAETMFNVSTEAEQYGDYGWENLHHKSHGEAFLWVALNRFRSDGLYLLDEPESALSP
                     ARQLALLARMHQLVSARSQFVISTHSPILMAYPGARIFLLDQDGIHQISYEATEHYTV
                     TRSFLQNPARTLRELFADPTTEDAS"
     gene            complement(6195..6575)
                     /locus_tag="VGA78_02255"
     CDS             complement(6195..6575)
                     /locus_tag="VGA78_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892710.1"
                     /translation="MSAWPPALLYAVVMFGVAVFALPTALAARRAARNGAPRLLVRGF
                     DPLPTFREEIARPFADVMTHVGQPALLRRRADRPGRTRELHLCRHTIRSAGERPGAAR
                     PSRPTLAGTSRRGSYPTLSHGPGR"
     gene            6688..8853
                     /locus_tag="VGA78_02260"
     CDS             6688..8853
                     /locus_tag="VGA78_02260"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX9892711.1"
                     /translation="MVRPPLAAYLTSSARWIQARLRSKRFWRFVLAGGVVGLLVIGYE
                     AAFRARIHPSMERLPTALYTRPTLWGAPEERAEPVPIGSLKGEIAEYRIPVRLDVVPD
                     HLIQAVLAVEDQRFYDHHGLDLKRIAGAAFANLKSGGIRQGGSTITQQLAKNLFLSSR
                     RTPLRKLREAAMASALEDRYDKATILEAYLNEIYLGQDGGDAIHGVGAAARYYLGKEV
                     SDLTAGEAALLAGMISAPNRYTPVRHPATARQRRDLVLGLMEAQGRIRAGSANRGRRE
                     RIRSRSHPRLAVHAPYFRDFAVAGLAQQAARLGPRGGAVFTTLDADLQRAANRAVREG
                     LGQLPARGAQAALVALDPRTGEVLAMVGGRDYGASQFNRATEARRQPGSAFKPVVALA
                     ALGRDGRDDPQFTLASVIRDEPLQVETPAGRWEPVNYDREFRGPVTFREALEQSLNVP
                     FARIGLAVGPERIVAVARDLGITSPLRSLPSLALGASEVTPLELTRAYGTLAAGGYRA
                     ELRALLGMVDQQGRARALGERRGVQAVDPAEAYLVTSALEGAAARGTGRGLGDLAEWG
                     GLAGKSGTSNDWRDAWFVAYTPSLAVGVWVGYDDGRSLRLPGARAALPIVARFLHAVL
                     EDQRPEPFSMPEGVELARISSGTTDGWVDWSCDGQPEVFLRGTAPRNGCRSFEFMERW
                     GRGMDHRTEKLLELLQEHGGEFVRRLAERLSEEGRRALR"
     gene            complement(9182..9457)
                     /locus_tag="VGA78_02265"
     CDS             complement(9182..9457)
                     /locus_tag="VGA78_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892712.1"
                     /translation="MSPKPRRPKHPTPKQLVQWRGISRIDQPSTRTYGWFVRIGFVTR
                     RNGTSGPKHSKFFGDAGHGGPEKSLRAARRWRDQQAPKPKRGTARHK"
     gene            complement(9520..9939)
                     /locus_tag="VGA78_02270"
     CDS             complement(9520..9939)
                     /locus_tag="VGA78_02270"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9892713.1"
                     /translation="MIPTYGLTHIALAVRDPERAFRFYQGVLGAVAVYRSDDFIQAQT
                     PGSRDVLVLERGGSKAGTSGGVAHFGFRLTDPADIEPARRAVKAAGGTVQEQGEFVPG
                     EPYLFCRDPDGYTVELWYEIPTPVDPPARRPAARKPG"
     gene            complement(9943..10500)
                     /locus_tag="VGA78_02275"
     CDS             complement(9943..10500)
                     /locus_tag="VGA78_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892714.1"
                     /translation="MAKRTRYKLEKVEVFPADSRPASWTFAGAPVRGVEHTYLVNDTN
                     VDLRKRQWEFIVRVPEERNGRVEVRPRTVPNVTAWAELPDRSLTFMPATRGAAKGRWY
                     CQVALADASGEKSKAVVRAEQRDELPSWFREVDSHLRRKETVRPTQGTDANALVALVA
                     AGDHAAMIRLFFATKVWILSEKVVL"
     gene            10694..13345
                     /locus_tag="VGA78_02280"
     CDS             10694..13345
                     /locus_tag="VGA78_02280"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9892715.1"
                     /translation="MTIVGRWLTQSLARRITVLVSVLLLAVGAGVLAVSFYQVVRVSE
                     QMAADRLEQIASQLTPLFARGNQDRGARLSRLASNPVILSGLKAHDTLPGSPAGLALQ
                     QAVAADRRVAVALFDSTGVRLLEAGPPGYPSWFGDEPMTLNAALTDSGLTIGPLVRLN
                     DSTLLYDLVLPVRDGSSILGAVLHRGTMILNPESRATFGWLLGSSTSVVLGNPSTNVW
                     TDLGSISTAPPREALDTGTINQFSWGETDYIGFTQAIPKTPWFLIVRAPRSSVRMPAT
                     AYLSRAAGLTLVLVGLGGLVAAAIGRRVSRPIEEITEVTESIAGGDYQSRANETAPGE
                     VGRLGAAFNAMVQRVADSTSQVRESEESLRGFVSRSGEGIWRMEFPDGLDTSLAPDRQ
                     LDAWYRAELECNQSMARMLGVELPNGMARFPLERVFPRNDPAAVQVLRNFMRDSYRVE
                     GAETRALLDGTGTRLFVDHLIGIVEQGRLRRVWGTRRDITLERMVDERLSQSQRLESI
                     GRLAGGVAHDFNNLLTVMLGYAESLKERLPDGQARRDADEIRQTALKAAELSRQLLAF
                     SRGQVLRPTILDLNAVLRAMEPILRKVLGEDIDLQLNLADPLEHIEADPGQIERVVMN
                     LVVNGRDAMPEGGTLELRTAVSELHESDIPSHPTLTPGGYVLLSISDTGTGMTDEVKR
                     HAFEPFYSTKDKGRGHGLGLATVYGIVRQSQGGITLYSELGHGTEFKVLLPAKVGAVA
                     TEIAASAPESSGAVRGETILLVEDEPAVLEMAKTALSEAGYNVLAAANGQEALRVSAE
                     QRGPIDLVLTDMVMPGMNGRDLVKALRQRRPKIRVIISSGYSGETHPALNSMSPDEGY
                     LEKPFLISKLRRSVREMLDTTGTSTEY"
     gene            13464..14030
                     /locus_tag="VGA78_02285"
     CDS             13464..14030
                     /locus_tag="VGA78_02285"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEX9892716.1"
                     /translation="MVSRRTFVAAGIAALPGMVGLPRWLFAEDEATPLLPFEGNAASR
                     ELAFTHSHTGERLAVEYFTAGSYQPEAMVEVNQFLRDFRTEEVHPIDPGVLDILHALR
                     IMTGGSRPFQVISGYRSPATNAMLRRLSGGVAGNSLHMEGKAIDIRLPGVSLRRVRDA
                     ALKLKRGGVGYYPASRFVHVDTGRVRRW"
BASE COUNT         2348 a         4651 c         4823 g         2341 t
ORIGIN      
        1 gcgctttgcc agctccaaac gccggttaga cagcattgga cgaggcgggt tcgattcagc
       61 ggccctgggc ctgcacggcc tgcaccgatg atgctaccag caggcgaagg gtcggaagat
      121 ccacatccgc caatcgtctg atgtagaggc agctcttgcc cacccggtac ttaccaaggc
      181 gcggaaggag tgggttattg gcgaggaagt cggccatgaa gtagagcacg aggccagtgg
      241 agcgcggggc gaaagcagcg attggccatt cggtagcccg gccagttgag ccagtgatcg
      301 gatgccgacc aaagccaata atggtgggac cccacatggt cgcccgcgct ccggtagcgg
      361 cgcgcatcat cgcggcgact gtacgagcat cgcgttggcg ctcggactgg cgaatcgtgc
      421 cgagaaaggc ggcgacactg gcggtggtcg gtctcgtctt gggctcaggc atcgagtctc
      481 cagcagctcg cagacttatc gggcctgaat tgcaggtgcc ccggagtgta ccgtccctgg
      541 atagatggcg atgctgtcta acgaaccgca tttcagctgc gagggcgctg cgcggcagcc
      601 gccgcgcaga cctcaaggcc aaagatagag cgcggcggct gacgccgata gcgcgccctc
      661 gtcagctgca catgcttgtt aggcagcgcg tcttgacaag ggttccgacc gggtcagtcc
      721 cagacattgc cgatgcagat gcgcaccaca cgcccatcgc acgtagtcac gttgatcacg
      781 tgaaggcgct cccgcggatc ctcatagatc cgatccagaa tcttcccggt gggaaggcgt
      841 gccgtagaag tcgagcacac gctgctggta tgcccgaccc tacgggtgtc tggcggcgca
      901 gcgatactcc ccatcattcg cgcttttcgc cgggcaaggc tatacggtcg cgattctggg
      961 cgagcaatcg ctcggtaaag tcgacgcgct cctggagctc tgccagctgt gtggcctgac
     1021 tggcaaagct gttctgagag tcttccagcg cggtggcttg ctggtccagt tgcgccctca
     1081 gctgagcaat ctcggaccga gacatgcgtc cgctgatggc tccggcaatg gccttcacgc
     1141 tcacgatgag cgtgatggcc gccatcgcga gtgccatcag gaaaacggtc tcgctcatgg
     1201 ttgtctcctg aggggaaaag cggttcgtcg ccgcgctgcc taactattat tggacctgca
     1261 ggccagcgac atgccagcgt gtaagcatcc cgtaaagctg caatctttgc agcctaatca
     1321 gaaactgctg caatcggcag ttcgccgcaa actgcactgc atcaagtagt tcccagcccg
     1381 ttagtctgct tccctacctt cttcgcccgg ctcagaatgc tcacttcagt tccggtgagc
     1441 cggaactgcg ggtcgagccg gacggcgcgg aacgcggctg gtgacgtttt gggactgcaa
     1501 tctggaatgt tgcgcgcatc cacagatgct gcgatcccga gcttactggt attccggcta
     1561 ctgccagcca gagactggtc gcaattgtcc gctgtcctcc ggcaacgctc cctatcaatt
     1621 ctgatcgctt gaccgcgtgc caagatgatc cagtgcagag ccggtcagtc cctcttctcg
     1681 gagcttgccg gtgctgccga gtcggtttgg cgcaggaatg ctcccacgat ccggatggtc
     1741 tgctcgggct cgtcgttggg gaaggcgtga ccggcgccgg tgatgacctc gaatctcgcg
     1801 cccggcacct tctccgcgaa cccgcgaacc gtgggcggcc gggcctcgtc gaactcgccg
     1861 gccaggaaaa gcaccggcag ggtcagctcc cccagccgat cggtccggtc atggtcgcgc
     1921 agcgtcccgg tggcgtggaa ctcggttggc ccccacatgt agcggtacac gctgtcgttg
     1981 ccggtgacgc cttcgcactc gatggccggg gccggcggct gtcgccggct catgaaccgg
     2041 gcgtagaacg aatcggtggc ggcccggtag gccggcgaat ccacggtccc cgccgcctcg
     2101 tgttcccgga gggttcgctg caggtcggcc ggcatttgct ggcgcagagt gtccccgtcg
     2161 gcgatccagc ggggcgtgct gaccagcggc ccgctcaggg tcaccgattg gatgccggac
     2221 cccggccggg tgagggcgta ttccagcgcc acggtcgcac cccacgagtg gccgtagaga
     2281 tgcagccgag tgaggcccag gtgagcccgg atcgaatcga tctcctcgac gaagcggggg
     2341 agccgccaga gcgtggtatc ggtggggcgg tcggaacggc cggtgccgag ctgatcgtag
     2401 agaatcaccg gacgatcggc gcccagtccc ttgagacggg ctagccggca gcttcgcccg
     2461 cccggaccac cgtggatcag caagaccgga gttccgggtc cttcgcccgc gacctcgtac
     2521 cagactcggc cggctcccac cggaatgaag ccggaccctg gttccagcga ggtttggtcg
     2581 gccggcgcac aggcgccggc cagcaagatc accagccggg ggaaaccgga agagaggttc
     2641 atttcagttg aaaggtaata ccgcgttact atcccccgat gccgaaaccc ggtgccggcc
     2701 gcgtcatgga agtccagatc tttggcaccc ggaagagtcc cgccactcgc tcggcgctcc
     2761 ggttcttcgc ggagcgccgg atccgcaccc acttcgtcga cctgatggag cgggccgcgt
     2821 cgccggggga gctgcgacgg tttgcccaga agttcggggt gcgggagctg atcgaccggg
     2881 aaggccgccg cttcgccgag ctgggcctgg gcccggcgag ccacggcgag gaacgctggc
     2941 tcgagctgct ggcggctgag ccgttactgc tcaagcagcc cctggtgaga aacggtaacc
     3001 tgctcaccat cggcgagtca ccgacgacct ggagtgaatg gatcgcccgg gcggcgacag
     3061 cctgagcgca gccaaggatc cggactcagc gccggagccg tcgccacgcg gtttacttcc
     3121 cgatccgcta gactgggtca cggaggttcc catgaaacag cgcgaggatc gggcagacga
     3181 gagtgatccg ggccgggatc tggaggagga cgcggaagtg gagctggaga ccggtcgcgg
     3241 cctgcacgcc gaggcccagg tcatctgtcc ctactgcggc gaagcagtgg agatcacgct
     3301 ggacccgggc ggcgggctga ttcaggagta cgtggaggat tgtcaggtgt gttgccgccc
     3361 gtggcaggtc catgtgcggt atgaggcgtc gggcggagcg gaggtctgga tcgaggaagc
     3421 ccagtagaat accgcggggg actccgaaat gagactggtg ctggccttgc tcctgctgat
     3481 gcgggcggat gcaccgacgg ccgaccaaac ccaggcgccg ccgatcgtca tcacccacgt
     3541 caacctggtc aatcccgaga ccggcgcggt aagggccaat cagaccatgg tcatcaccgg
     3601 cgacctgatt cgcgcggttg gaaactccga cgcggttccg gtcccgcgcg gggcccgtga
     3661 ggtcgacgga cgaggcgggt ggctcatccc tgggctctgg gacatgcacg tgcacctcgg
     3721 catgagcggt cgcccgtcgc tcgcgctgct ggtcgccaat ggcgtcaccg gcgtacgcga
     3781 catgggcggc accggcgacc aggtgcgggc ctggcgcgac agcatcgccg ccggagcgct
     3841 tcttgggccc cgcatcgaga tgagcggtcc gatcgtcgag aacgcgcgct ggctgaacgc
     3901 cgtgatgcgg ttcgctctgc agcgagggga cagcaatctc attcgcgagt tgaacggccg
     3961 catcgcggtg gcgacacccg aggaggcccg ggctgccgta gaacggatcg ccgccaccgg
     4021 cgccacgctg gtcaaggtgc gtaccaaccc tccggcaccg gcttacttcg cgttactgcg
     4081 tgaggcgaag gcgcgcggcc ttcgggtcgt ggggcatccc cccgagcgcg gccccagcct
     4141 ggcggacgcc tccgattcgg gccaggccag catcgaacat ctgctgttca ggtttcgcga
     4201 tgggacctgg atggtcacgc tcgaggcgct gtccccagcc gaacgcagcg atctcctggg
     4261 ccggttgcgt cgcaaccgga cggcgctggt gccgaccctg atcgcagggg tgggcttccg
     4321 ccgcatgccc gacagcatgg cgctggcgct catcaccgac agcagcggcg cgctcgatcc
     4381 ccgccgccgc ttcgtatcac cggccctggc ggaacggtgg cggcggcaga tcgagatgaa
     4441 acaggacgag ggcgcgcagc cggactggaa tgcgctcgcc ctgagggcca gcccgtatct
     4501 tcgcgccctc gactcggccg gcgtgaccat cctcgcgggg accgatctgg gaacgccgct
     4561 cacctacccg gggttcggcc tgcacgacga gctggcactg ctcgtgcggg agggcggact
     4621 cacccccgcc gctgcgttgc gcgctgccac catcggcccg gcccggttct tcggccggga
     4681 gcgagaggtg ggcaccatca cggccgggat gcgggccgat ctggtactgc tcaccggcaa
     4741 tccgctggcc gatgtcacca acgtgggaaa gattcgggcc gtggtgctgg gcggccgact
     4801 gctcgaccgc aaggagctcg acggcctact ggcggatgtt gctgccggcc actgagacgc
     4861 tcgtcgaccc gcgggggaac tcgatatacc tggccgtctc gtccgccacc tccgggccgt
     4921 gcagggcttc gaccacgctc aacgccatat ccatgccggc tgataccccg gccgaggtga
     4981 tgatgccgtc ctcgaccacc cgctggcctc gttcgaccgt gatggtcgga tcgaggctgg
     5041 ccagcagatc cagggcaccc cagtgggtgg tcgctcgccg cccggccaga aggccggccc
     5101 gcgcgagcag cagggacccg gtgcacaccg acgtgacccg ctgagcccgc ttggcggtgc
     5161 gccggatcca gtccagcacc gtggtctcgc tgaggagcgc tcgggtccca aatccaccgg
     5221 gcactaccag caggtcgatc ggcgggtcgg ccgtgatgtc gctgtagggc aagacccgga
     5281 gaccaccggt cgccgtcacc ggaccggggc ggaccgcgac ggtgaaggga tgaaacggag
     5341 ccgagtcttc gttccggcgg gagtcgatgc ccggtaccag ccgggttcgg gagaacactt
     5401 cgaacggccc ggcaaagtcg agcacctcga ctccgtcaaa gatgagaatg ccaacctgca
     5461 tctgcttcac gacgcgtcct cggtggtggg gtccgcgaag agctcccgca gcgttcgcgc
     5521 cggattctgg aggaagctcc gggtgaccgt gtagtgctcg gtcgcttcat agctgatctg
     5581 atgaatgcca tcctggtcca gcaggaagat gcgcgctccg ggataggcca tcaggatggg
     5641 cgaatgggtc gagatcacga actggctccg ggcgctcacc agctgatgca tccgggcgag
     5701 cagggccagt tggcgggcag gcgagagggc cgactccggc tcatccagca gatacagccc
     5761 atcggaccga aagcgattca gagccaccca gaggaaggcc tcaccatgcg acttgtggtg
     5821 caggttctcc cacccgtagt caccgtattg ctcggcctcg gtcgagacgt tgaacatcgt
     5881 ctcggcccgc agaaagaacc ccgacttttc gcggcgaggt cctcgcacca gtcggagata
     5941 ctgatgcaat gaggactcgc tgggccggtt cgaggtcgtg aagttcttac tgccgccctc
     6001 cgggttgaag ccggccttga tcgcgatggc ttcgagcagc gtggacttgc ccgatccgtt
     6061 ctccccgacc aggaaggtga ctccgggatg gagcgcgagc cgctgcaagt gagccaccgc
     6121 cgggatggaa aacgggtacg cccgccagtc ggccaccttc tcgcggagca gctcgacctg
     6181 ctgcaggatc gggctcacct gcctgggccg tggctcagcg tggggtagct ccctctgcgg
     6241 gacgttccgg ccagtgtcgg tcgggacggg cgggcagcgc ctggtcgctc cccagccgat
     6301 cgaatcgtat gtcggcatag atgaagttct cgggtgcgac cggggcgatc cgcccgccgc
     6361 cggagcaacg ccggctggcc cacatgggtc atgacgtcgg cgaacgggcg ggcgatttct
     6421 tcccggaagg tcgggagcgg gtcaaaaccg cggaccagga gccgcggcgc tccgtttctg
     6481 gcggcgcgac gcgcggccag cgccgtcgga agtgcgaaga cagccacgcc gaacatcacc
     6541 acggcgtaga ggagtgccgg cggccatgct gacaaggtgc ctcctggcga atgaggagaa
     6601 gaatagccct ctcggtggtg ttccaggatg aaaccattcc aggcgtctga gcgtctgacc
     6661 gtatatgcac ctcgggaggg acgacccatg gttcgacccc cactcgccgc ctacctgacc
     6721 tccagcgcgc gctggatcca ggcccggctt cgctccaaac gcttctggcg cttcgttctg
     6781 gcgggagggg tcgtgggcct cctggtcatc ggatacgagg ccgcgttccg ggcccggatc
     6841 cacccttcga tggaacgtct ccccacggcg ctctacaccc gtcccacgct ttggggcgct
     6901 cccgaggagc gcgccgagcc ggtgccgatc ggctcgctca agggcgaaat cgccgaatac
     6961 cggatcccgg ttcgcctcga cgtggttccc gaccacctga tccaggcggt cctcgcggtc
     7021 gaggaccagc gcttctatga ccaccacggg ctcgacctca agcgcattgc cggggccgcg
     7081 ttcgcgaacc tgaagagcgg gggaatccgg cagggcggca gcaccatcac ccagcagctg
     7141 gccaagaatc tcttcctgtc ctcgcgccgc acgccgcttc ggaagctgcg cgaggcagcg
     7201 atggcctccg ccctggagga ccggtacgac aaggcgacga tcctcgaggc ctacctcaac
     7261 gagatctacc tgggccagga cggcggtgac gccatccacg gtgtcggggc cgccgcgcgc
     7321 tactacctcg gcaaggaagt gagcgacctg acggcgggag aagccgccct gctggccggg
     7381 atgatcagcg cccccaatcg ctacaccccg gtgcgacatc ccgcgaccgc ccgccagcgt
     7441 cgcgacctgg tgctcggact gatggaagcc cagggccgca tcagggcggg cagcgccaac
     7501 cgcggccggc gagaacggat ccgatcccgg tcccatcccc ggctcgcggt gcacgcgcct
     7561 tacttccgtg atttcgcggt tgcgggtctc gcccagcagg cggcccggct gggtccgcgg
     7621 ggaggcgccg tgttcacgac gctcgatgcc gacctgcagc gagccgccaa tcgggcggtc
     7681 cgcgagggtc tgggtcagct gccggcacgg ggcgcgcagg cggccctggt cgcgctcgat
     7741 ccgcggaccg gcgaggtgct ggcgatggtg ggtggacggg actacggggc gtcgcagttc
     7801 aaccgcgcca ccgaagctcg gcgccagccg ggcagcgcat tcaagccggt ggttgcgctc
     7861 gccgcgctgg gccgcgacgg acgggacgat cctcaattca ctcttgcgtc cgtcatccgc
     7921 gacgagccgc tccaggtcga gacccccgcc ggtcgctggg agccggtcaa ctacgatcgg
     7981 gagttccggg gcccggtcac ctttcgggag gcgctggagc agtcgctcaa cgtgcccttc
     8041 gcccggatcg gcctggcggt cgggccggaa cggatcgtgg cggtggcccg ggacctcggg
     8101 atcaccagcc cgctccggtc cctgcccagc ctggcgttag gcgcgtccga ggtcacgccg
     8161 ctcgagctca cccgggccta cggtacgctg gccgccggtg gctatcgggc cgagcttcgc
     8221 gccctgctgg gaatggtcga tcagcaagga agggcgcgag ctctcggcga acggcggggc
     8281 gtccaggcgg tggatccggc cgaggcatat ctggtcacgt ccgccctgga aggagcggcc
     8341 gctcgcggca ccggtcgcgg gttgggagac ctggcggagt ggggaggcct ggcggggaag
     8401 tcgggcactt ccaacgactg gcgtgacgcg tggttcgtgg cctatacccc gtcgttggcg
     8461 gtcggggtct gggtcggcta cgacgacgga cggagcctgc ggctcccggg agcccgcgcc
     8521 gcgctcccca tcgtcgcccg gtttctccac gcggtgctgg aagaccagcg cccggagccg
     8581 ttctccatgc cggagggagt ggagttggct cggatcagct cggggacgac cgacgggtgg
     8641 gtggattgga gctgcgacgg acagccggag gtcttcttgc gaggcacagc tcccagaaac
     8701 gggtgccgct cgttcgaatt catggagcgg tggggtcgcg ggatggatca ccgcaccgag
     8761 aaactactgg agctgctcca ggagcacgga ggcgaattcg tccgccggct ggcggaacgg
     8821 ctctccgagg aaggacgccg ggcgctgcgt taggaccgtt ccaggtcagt cgtcgacggt
     8881 gaaatcctcc gtctcgtcgg cgacggccgg gcggtcgacg agctgccgct ccgaacatcg
     8941 gaaaaatcag cgggtgggtc cttcctgttc ttgcgaccga agagattgtc gagaattccc
     9001 atctggcgtc tccttctctg gcgaggggac cgcgccggtg cgcggttccg ctatccgcaa
     9061 ggagtgagac gacaaagcgc cgggatcttc gcacccgcgt ccggaccccg aactggggca
     9121 ccacgcgtgg ccgtttgatc gcgcgatggg agcatccggg atcagctgcg tcccggaagt
     9181 gctacttgtg tctggcggtt ccgcgtttgg gcttcggagc ctgctgatcc cgccagcgcc
     9241 gagccgcccg cagcgacttt tccggccccc cgtgccccgc gtcgccgaag aacttggaat
     9301 gcttgggccc gctggttccg ttccgccggg tgacgaaacc gatgcgcacg aaccagccat
     9361 aggttcgggt cgagggctgg tcgatgcggg agatgccacg ccactgcacc agctgcttgg
     9421 gggtgggatg cttgggacgc cgcggttttg gactcaagtc gactctcctg tgatcgggtg
     9481 gtaccagtat ccgccatcaa agcagtgact gtctacacct taccctggtt tgcgcgccgc
     9541 cggccggcga gccggcggat ccaccggggt ggggatctcg taccagagct ccaccgtgta
     9601 tccgtcgggg tcgcggcaga agagataggg ctcacccggc acaaactctc cctgctcctg
     9661 gaccgtcccg cccgcggcct tgaccgcccg gcgggccggc tcgatgtcgg ccgggtcggt
     9721 cagccggaag ccgaaatgcg ccaccccgcc cgacgtcccc gccttggagc caccccgctc
     9781 gagcaccagc acgtcccggc tgcccggggt ctgggcttga atgaaatcgt cggaacgata
     9841 caccgccacg gcgcctaaca caccctggta gaagcggaac gcccgttccg ggtccctcac
     9901 cgccagcgcg atatgggtca acccgtaggt cgggatcatg gactagagga cgaccttctc
     9961 ggaaagaatc cagaccttgg tcgcgaaaaa gagccggatc atcgcggcgt ggtcgcctgc
    10021 cgccaccagc gccaccaggg cattggcatc ggtcccctgg gtggggcgca ccgtctcctt
    10081 gcgccggagg tgcgagtcga cctcccggaa ccaggagggc agctcgtccc gctgttccgc
    10141 ccggaccacg gccttggatt tctcgcccga ggcatcggcc agcgccacct gacaatacca
    10201 ccgccccttg gccgcgcccc gagtcgccgg catgaaggtg agcgaccggt caggcagctc
    10261 ggcccaggcc gtgacattag gcaccgtccg gggccgcacc tccacccggc cgtttcgctc
    10321 ctccggtacc cgcacgatga actcccactg ccgcttgcgc aaatcgacgt tggtgtcgtt
    10381 caccagatag gtatgctcca caccccggac cggagctccc gcaaatgtcc acgaggccgg
    10441 gcgggaatcg gcgggaaaaa cctccacctt ctccagcttg taccgcgtgc gtttggccaa
    10501 aggcatctcc tgcctgaggg gtcccggcct gcctaaccgt atgggggtcc gcagacaata
    10561 cccccgctcc ccggtttcgt cacccccggg tccggctgat gctaacatgc acctaggcgg
    10621 ttggtattgc gattgctaag ttaggaaatg gggccggtcg ttccgccccg aattcgccta
    10681 acagaatagc ccaatgacca ttgtgggacg ctggctgacg cagtcgctgg cccggcgcat
    10741 caccgtcctg gtatcggtcc tgctcctggc cgtgggtgcg ggggtcctgg ccgtctcgtt
    10801 ctaccaggtg gtccgggtga gcgagcagat ggcggccgac cggctggagc agatcgccag
    10861 ccagctgacc ccgctgtttg cccgcggaaa ccaggaccgt ggcgcccggc tgtcgcgact
    10921 cgcgagcaat ccggtcatcc tcagcggcct caaggcccac gacacgctgc ctggctcccc
    10981 ggccggatta gcgctgcagc aggcggtggc ggccgaccgg cgggtcgcgg tggcgctctt
    11041 cgactctacc ggggtcagac tgctggaggc cgggccaccc gggtacccgt cctggttcgg
    11101 cgacgaaccc atgacgctga acgccgccct gaccgacagc ggtctcacga tcggcccgct
    11161 ggtgcggctc aacgattcca ccctgctcta cgacctggtc ttgccggtca gggatggcag
    11221 ttccattctc ggcgccgtgc tgcaccgcgg caccatgatc ctgaatcccg aaagccgcgc
    11281 caccttcggg tggctattgg gcagcagcac gtcggtggtg ctgggcaatc cctcgaccaa
    11341 cgtgtggacc gatctgggca gcatctcgac ggcaccgccg cgggaagccc tggataccgg
    11401 gaccatcaac cagttctcct ggggggagac cgactacatc gggttcaccc aagcgattcc
    11461 caagaccccg tggtttctca tcgtccgggc gccccgcagc tcggtcagga tgccggcgac
    11521 agcgtacctg agccgagccg cgggcctgac gctggtgctc gtggggctgg gcgggctggt
    11581 cgcggcggcc atcggccggc gggtgagccg accgatcgag gagatcaccg aagtcaccga
    11641 gtcgatcgcg ggcggtgact accagtcccg cgccaacgag acggcgccgg gtgaagtggg
    11701 ccgtctgggc gcggcgttca atgcgatggt gcagcgagtg gccgactcga ccagccaggt
    11761 ccgggaaagc gaggaaagcc tgcgcgggtt cgtctcccgc tctggggaag gcatctggcg
    11821 catggaattc cccgacgggc tggatacttc gctggcgccc gaccggcagc tcgacgcctg
    11881 gtaccgagcc gagctcgagt gcaaccaatc catggcacgc atgctgggcg tggaactgcc
    11941 gaacggaatg gcgcgcttcc cgctggagcg ggtgtttccc cggaacgacc ccgccgccgt
    12001 ccaggttctc cgcaacttca tgcgcgacag ctaccgggtg gagggcgccg agacccgcgc
    12061 gctgctggat gggaccggca cccggctctt tgtcgaccac ctgatcggga tcgtggagca
    12121 gggacgactt cgtagggtct ggggcactcg gcgcgatatc acgctggagc ggatggtgga
    12181 cgagcggctg tcccagagcc agcggctgga gtcgatcggc cggctggccg gcggcgtggc
    12241 ccacgatttc aacaatcttc tgacggtcat gctgggttac gccgagtcgc tcaaggaacg
    12301 gctgccggat ggccaggccc ggcgggacgc cgacgagatc cggcagaccg cgctcaaggc
    12361 cgccgagctc agccgccagc tgttggcgtt cagccggggt caggtgctca ggcccaccat
    12421 cctcgatctc aacgccgtgc ttcgggcgat ggaacccatc ctccgcaagg tgctgggcga
    12481 ggacatcgat ctgcagctca atctggcgga ccctctggaa cacatcgagg cggatcccgg
    12541 ccagatcgag cgggtggtca tgaacctggt cgtaaacggc cgcgacgcca tgcccgaggg
    12601 cggcaccctc gagctgcgaa cagccgtgtc cgagctgcac gagagtgaca tcccgagcca
    12661 cccgacgctg acgccgggag gctacgtcct gctttccatc agcgacaccg ggaccggcat
    12721 gaccgacgag gtcaagcggc acgccttcga gcccttctat tccaccaagg acaaggggcg
    12781 aggtcacggg ctcggcctgg cgacggtata cggtatcgtg cgccagagcc agggcggcat
    12841 cacgctgtat tccgaactgg gccacggcac cgaattcaag gtgctgctac cggccaaggt
    12901 cggtgctgtc gcgaccgaga ttgcggcctc ggcaccggag tcgtcgggcg cggttcgggg
    12961 tgagaccatc ctgctggtgg aagacgaacc cgcggtgctg gagatggcta aaaccgcgtt
    13021 gagcgaggca ggttacaatg tgctggccgc ggccaacggg caggaggccc tccgggtcag
    13081 cgccgagcag cgggggccga tcgacctggt gctcaccgac atggtgatgc cgggaatgaa
    13141 tggccgggac ctggtcaagg cgctcaggca acgccggccc aagatccggg taatcatttc
    13201 ctcgggttac agcggggaga cccatccggc gctgaactcc atgtctcccg acgaaggcta
    13261 cctggagaag cccttcctca tttccaagct gcggcgcagc gtgcgggaga tgctcgatac
    13321 aacggggacg agcactgagt actgagtact gatgactgag tgtcgagaat tgagtgccct
    13381 gggtggcttc ggatttgcct cgaccggttg acgtagacct cgccgctggc gaacttgtcc
    13441 ggtcgaattg aggagtccga agagtggttt cacgcaggac ctttgtagcc gccggaatcg
    13501 cagcgctgcc gggcatggtt gggcttcccc gctggctctt tgccgaagac gaagcgaccc
    13561 ccctgctccc attcgagggt aacgccgcca gccgggagct ggcctttacc cattcccata
    13621 ccggcgaacg acttgcggtc gagtacttca ccgcgggctc gtaccagccc gaggccatgg
    13681 tcgaggtcaa tcagttcctg cgtgacttcc gcaccgaaga agtacacccc atcgatccgg
    13741 gggtactcga tatcctgcac gcccttcgga tcatgacggg cggctcgcgg ccgttccagg
    13801 tgatctccgg ctaccgctct cctgccacca acgcgatgct acgccggctc agcggagggg
    13861 tcgcggggaa cagtctccat atggaaggga aggcaatcga catccggctt cccggcgttt
    13921 cgctccggcg ggtgcgggac gcggcgctca agctgaagcg tggtggggtg gggtactacc
    13981 cggcgtcgcg gtttgtccat gtggataccg gacgcgtgag acgctggtag ctacggtcga
    14041 atacagtcga aggcggtcga agcggtcgaa gcagtcgaag gcggttccaa cctgggatcg
    14101 cctctctttt ttcgaccgtc ttcgactccc ctcgaccatc ttcgactgta ttcgaccccg
    14161 ttt
//
LOCUS       DASWKS010000065         4470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2248989, whole genome shotgun sequence.
ACCESSION   DASWKS010000065 DASWKS010000000
VERSION     DASWKS010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2248989"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VGA78_02290"
     CDS             complement(<1..252)
                     /locus_tag="VGA78_02290"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEX9892717.1"
                     /translation="MAASPPGRPSARPIVSLVVAMAENRVIGKGGGLPWHLPDEMRHF
                     KRLTVDHTVIMGRRTFDEIKRPLDNRRNVVITRNPDFRPH"
     gene            complement(280..1074)
                     /locus_tag="VGA78_02295"
     CDS             complement(280..1074)
                     /locus_tag="VGA78_02295"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEX9892718.1"
                     /translation="MKQYLALMQHILDNGRDKTDRTGTGTLSIFGHQMRFDLAQGFPL
                     VTTKKLHLKSIVHELLWFLRGETNVASLNAAGVRIWDEWAREDGDLGPIYGYQWRSWP
                     TPDGRHIDQIAQVVDAIRRTPDSRRLIVSAWNVADIPRMALAPCHVLFQFHVADRRLS
                     CQLYQRSADVFLGVPFNIASYALLTLMLAQVTGLEPGEFIQTLGDAHLYRTHLEQARL
                     QLSREPRPLPRMELNPEVTALEQFQFEDFRLVGYEPHPHIAAPVAV"
     gene            complement(1071..2729)
                     /locus_tag="VGA78_02300"
     CDS             complement(1071..2729)
                     /locus_tag="VGA78_02300"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9892719.1"
                     /translation="MAAVGVTAPVRADIRARAAYAEGAGIYRILPSAVACPSRVEEVI
                     RLLEWARESGMPVIPRGAGSSMSGGNVGEGLVLDLSAVGDRRVTVDAANRVAHAAAGA
                     TGAAVNSAARRHGLRLGPNPSSLAFATSGGLVSTNASGARSFQSGSVRRWVAGLDLIT
                     ADGEQLVLDRGRVADQTVAAVRRFEQLAGRRIRVASRLVRERFPGTRKNSSGYGLDAW
                     LASGDLADLAIGAEGTLGLVTAVRWKLEPVPAARGGLRVAVLDDAELMYALGVLQGMD
                     PSAIELLDRTFLRFIAGSLSDATGHLALRAGAILLAEFEGAPDFVQARLRAARGRLGP
                     RVYEATASYGESALEALWSIRHAASPILARLGTHRRSLQVIEDGCVPVENLPRYLAAL
                     RVIPERHGVEAVVFGHAGDGHLHVNLLPDTTQPGWEATVRAIFDEVSSVQLALGGTPA
                     GEHGDGRLRAGLVERLYGREIVDLFWDVKRAFDPEGLLNPGVILESRESPAPISSLKV
                     GPAAVELPADIADALRQIEQSGSWETDRLALADRPSARPPARPS"
     gene            2796..3590
                     /locus_tag="VGA78_02305"
     CDS             2796..3590
                     /locus_tag="VGA78_02305"
                     /inference="COORDINATES: protein motif:HMM:NF014078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF116 domain-containing protein"
                     /protein_id="HEX9892720.1"
                     /translation="MSDVPRAELIKLDTDRRLGHEWDEWDGTPLPDGGNFDAPISLFF
                     GWSAFATSAALALLWGLVWLVRPHLIAIHPLVYTTLTWTVTVLAIVAWAWWLLLAGSF
                     LTRRALLPEWLAERGPFLRLMRWTSRVAGRFGRRDWVENAAVKVYNAMALWRNRKVGT
                     GELLLLVPRCLSRETLDGVLDIARRYAVPVFVATRGQLARRVIRERRPRAVVAVACER
                     DMVSGLHDVAGKVPVLGLTLRLPSGPCKDTMVDLPRLEEWVRAYLV"
     gene            complement(3669..4271)
                     /locus_tag="VGA78_02310"
     CDS             complement(3669..4271)
                     /locus_tag="VGA78_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892721.1"
                     /translation="MRRTDGPTDRPPDRPTDRRTVILSAPKDLLGFTAILLFVGCQTT
                     STRPGFGPLPGSATAEVELFQGRATQILAEALRADSIPVARVVEIDGVIESDWFAVPG
                     YQVVQSRALGPGTVRVRAWVDIGKPGYSVYTIETVYRVYADPSRQERELEQPVAETHP
                     ARVKVAKLLERLVERYGEPVVKPDTGAKAPAVDTTFSIDD"
     gene            complement(4268..>4470)
                     /locus_tag="VGA78_02315"
     CDS             complement(4268..>4470)
                     /locus_tag="VGA78_02315"
                     /inference="COORDINATES: protein motif:HMM:NF012928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9892722.1"
                     /translation="IGPLALMDLVGLDTALRVSDIMFDEFREPQYAAPPLLRRMVMAG
                     HLGRKTGRGFYDYSVNPPVPAV"
BASE COUNT          732 a         1502 c         1520 g          716 t
ORIGIN      
        1 gtgggggcga aagtccgggt tccgcgtgat gaccacgttg cggcggttat ccagcggccg
       61 tttgatctcg tcgaaggtgc gccggcccat gatgaccgtg tggtcgaccg tcagacgctt
      121 gaagtggcgc atttcatcgg gcaggtgcca gggcagcccg ccgcctttgc cgatgacccg
      181 gttttcggcc atggcgacga ccagcgagac gatcgggcgg gcggacggac ggccgggcgg
      241 gctggcggcc acagggctct cgcgactcgt gactcgtgac tacaccgcaa ccggagccgc
      301 gatgtgggga tggggctcgt atcccaccag ccgaaaatcc tcgaactgga actgttcgag
      361 cgccgtcacc tcggggttga gctccatccg gggcaacggg cggggttcgc gcgagagttg
      421 cagccgggcc tgttccagat gggtgcgata caggtgggcg tcgcccagcg tttgaatgaa
      481 ctctcccggc tcgagcccgg tcacctgggc cagcatcagc gtgaggaggg catagctggc
      541 aatgttgaac ggtacgccga gaaagacgtc cgcgctccgc tgatagagct ggcaggagag
      601 ccgtcggtcg gccacatgga actgaaacag cacgtgacag ggagccagcg ccatccgggg
      661 aatgtcggcc acattccagg cgctcacgat gagccggcgc gagtcggggg tgcggcgaat
      721 ggcatcgacc acctgcgcga tctggtcgat gtgacgccca tcgggggtgg gccaggaccg
      781 ccactggtac ccgtagatgg gacccaggtc gccgtcttcg cgggcccact cgtcccagat
      841 ccgcacgccc gccgcattga gcgaggccac attcgtctca ccccgcagga accagagcag
      901 ctcgtggacg atgctcttga ggtgaagctt cttggtagta acgagcggga agccctgggc
      961 caggtcgaac cgcatctgat gcccgaagat gctcagcgtg ccggtgccgg tccggtcggt
     1021 cttgtcccgg ccgttatcca ggatgtgctg catcagggcg agatactgtt tcatgacggg
     1081 cgggcgggcg gacgggcgga cgggcggtca gccaatgcga gccggtcggt ttcccagctt
     1141 ccggactgtt cgatctgacg gagcgcgtcg gcaatgtcgg ctggcagctc caccgcggcc
     1201 gggcccacct tgaggctgga aatcggcgcc ggagactctc gcgactcgag aatcacgccc
     1261 gggttgagca gaccctccgg atcgaaggcc cgcttcacgt cccagaacag atccacgatt
     1321 tcccgcccgt acaatcgctc aaccaaaccc gcccggagcc gcccgtcccc gtgctcgccc
     1381 gccggggtgc cgcccaatgc cagttgcacc gagctcacct catcgaagat ggcgcgcacg
     1441 gtagcttccc agccgggctg ggtggtgtcg gggagcagat tcacatgcag atgaccgtcg
     1501 ccggcgtgtc cgaacaccac ggcctccact ccgtgccgct ccggaatcac ccgcagggcg
     1561 gccaggtagc gaggcaggtt ctccaccgga acgcagccgt cctcgatgac ttgcagggaa
     1621 cggcggtggg tccccagtcg ggccagaatc gggctggccg cgtgccgaat ggaccagagc
     1681 gcctccaggg ccgattcccc ataactcgcg gtagcttcat acacccgcgg accgagccgc
     1741 ccccgggcgg cgcgcaggcg agcctgaaca aaatcgggag caccctcgaa ctccgccagg
     1801 agaatggcac cagctcgtag cgccaggtgg ccggtcgcat cggagagcga cccggcaatg
     1861 aaccggagaa aggtgcggtc cagcagttcg atggccgacg gatccatccc ctgcagcact
     1921 cccagagcat acatcagctc ggcatcgtcc aagaccgcca cccgcagtcc tcctcgggcc
     1981 gccggcaccg gctcgagctt ccaccgcacg gccgtgacga gacccagggt gccttcggct
     2041 ccgatcgcca ggtcggccag atcaccgctg gcgagccagg catccaagcc gtatccgctg
     2101 gagttcttcc gggtccctgg gaatcgctcg cgcaccagac gggaggcgac ccggatgcgc
     2161 cgccccgcca gctgctcgaa gcgccggacc gccgcaaccg tctgatccgc gacccgtccg
     2221 cggtcgagca ccagctgctc accgtcggct gtgatcagat ccagaccggc gacccaccgg
     2281 cggacgctgc cgctctggaa tgagcgggcg ccggaagcgt tggtcgagac caaaccgccg
     2341 gaggtggcga aggctagact ggacgggttg ggacccaggc gaagaccatg gcggcgagcc
     2401 gccgagttga ccgcggcgcc ggtggccccg gccgcggcat gggccacccg gttggcggca
     2461 tcgaccgtga cccggcggtc acccaccgcg ctgagatcga ggaccagtcc ttcgcccacg
     2521 ttgccgccgc tcatcgagct gccggctccg cgcgggatga ccggcatccc cgactcgcgg
     2581 gcccattcga gcagccgaat gacctcctcg acccgtgagg gacaggccac ggcggagggc
     2641 agaatgcggt agatcccggc gccctccgca taggcggcgc gggcgcgaat gtcggcgcgg
     2701 actggcgcgg tgaccccaac ggctgccatc gggccaaagg tagcgatgtg acgtgacgcg
     2761 gcgaaatccc gagagggacg gtattatttg ggtccatgtc cgacgtaccc cgcgccgaac
     2821 tcatcaagct cgataccgac cgtcgcctgg gccatgagtg ggacgagtgg gatgggactc
     2881 ccttgcccga tgggggcaac tttgacgccc cgatatcgct tttcttcggt tggtctgcct
     2941 tcgccaccag cgccgccctc gcgttgctct ggggtctggt atggctggtc cggccgcacc
     3001 tgatcgcgat ccacccgctg gtctacacca ccctgacgtg gacggtgacg gtgctggcca
     3061 tcgtggcgtg ggcctggtgg ctgctgctgg ccgggtcgtt tcttacccgg cgcgcgctgc
     3121 tgccggaatg gctcgccgag cggggacctt tcctgcggct gatgcgatgg acttcacggg
     3181 tggcgggtcg tttcggacga cgggattggg tcgaaaacgc cgcggtgaag gtctacaatg
     3241 ccatggcgct gtggcggaac cggaaggtcg gcaccggcga gctgctgctg ctggtgcccc
     3301 gctgcctctc gcgtgaaact ctggacggcg tgctggacat cgcgcgccgc tatgcggtgc
     3361 cggtgttcgt cgccacccga ggccagctgg cgcgcagggt gatccgggag cggcggcccc
     3421 gcgccgtggt ggcggtcgcc tgcgagcgcg acatggtcag cgggctgcat gacgtggcgg
     3481 gcaaggttcc ggtcctcggg ctcaccctcc gcctgccctc gggaccctgc aaggacacga
     3541 tggtcgatct gccgcgactg gaggagtggg tgagagcgta cctggtctga caccattttc
     3601 gattgacgat tgacgattga cgattgctag tgcagccccc gaacccctcc acgagtaatc
     3661 gtcaatcgtc aatcgtcaat cgagaatgta gtgtccaccg cgggagcctt cgccccggtg
     3721 tccggcttca ccaccggctc cccgtatcgt tccaccagcc gttccagcag cttcgccacc
     3781 ttgactcggg ccggatgggt ttccgcgacc ggctgttcca gttcccgctc ctgccgggag
     3841 ggatcggcgt agacccggta cacggtctcg atggtgtaga cgctgtagcc cggcttgccg
     3901 atatcgaccc aggcccgcac ccgcacggtc cctggcccga gcgcgcgaga ctgcaccacc
     3961 tggtatcccg gcaccgcgaa ccagtcgctc tcaatgactc cgtcgatttc cacgacccga
     4021 gcgaccggga tgctgtcagc ccggagcgcc tcggccagga tctgagtcgc gcgaccttga
     4081 aacagctcca cttcggccgt cgccgaccct gggaggggac cgaacccggg ccgggtgctg
     4141 gtggtctggc agccgacgaa cagcaggatc gcggtgaagc cgaggagatc cttcggggcg
     4201 ctcaggatga ctgtccgtcg gtccgtcggg cggtcgggcg gtcggtccgt cggtccgtcc
     4261 gtccgtctca taccgccggc accggcggat tgaccgagta atcgtagaat ccccgcccgg
     4321 tcttccggcc caggtgacct gccatcacca tccggcgcag gaggggcggc gcggcgtact
     4381 ggggctcgcg aaactcgtcg aacatgatgt ccgagacccg gagcgcggta tccaatccca
     4441 ccaggtccat gagcgccagc gggccgatcg
//
LOCUS       DASWKS010000066         9514 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2612675, whole genome shotgun sequence.
ACCESSION   DASWKS010000066 DASWKS010000000
VERSION     DASWKS010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2612675"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1373
                     /locus_tag="VGA78_02320"
     CDS             <1..1373
                     /locus_tag="VGA78_02320"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9892723.1"
                     /translation="DLYSPQQLATFQRNTLGNNYGGVGMQIESQDGLITVVRVFPGTP
                     GEMGGVQAGDRIMQVDTTAVTGMKLEDVSGRLTGQAGTKVNVAFAREGIPEPIRVTFT
                     RAVIRVPAVPYTLILENGVGYLPLQRFNENAAEQVEQGLQQLRGKGAKSYLIDLRGNP
                     GGSLDQSLEISNLFLKPGVEIASVRHRGKTPEIYRANRLSVIDSSSVIVLIDQYSASA
                     SEIVAGALQDQDRALVVGMSSFGKGLVQTLFPLEGGWAIKLTTGKWYTPSGRSIQGEH
                     KQYADGRFVEYVPDTAETDSARKARPQFKSASGRVVFGGGGVTPDVVVKPDTITSPEL
                     EFLKAAVAPKQGIIYNTVYAYARELKNTVKPDFKVEPAWREELYNRLVKAEVKLDRAQ
                     YDAAEPLITRWLEERVARIAFGDSAWVRRALPEDRQLVTALDYLKKGRNQRELLAMAA
                     RESKNQ"
     gene            complement(1473..3266)
                     /locus_tag="VGA78_02325"
     CDS             complement(1473..3266)
                     /locus_tag="VGA78_02325"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX9892724.1"
                     /translation="MTARIVMSTLPLLALGLVGPRQAPPPISRVHYELRFDAATARQR
                     SLDVTMTFDVAAALPIRLSLPAWTPGAYEISNFARNVRSFEARQEATVLRWDKADFDT
                     WRVRPVRAGPVTLRFTYFADELDNARAWARTDFLLVNGTNVFLYPEGMNRNFPATVTV
                     KTQAGWTVITGMHRGSAGSYRETNYHDLVDMPFFIGRLEVDSSEIGGKWYRLASWPAG
                     VFRGVERQQFHRELAGSVPAMTQVFGETPWDSYTTLLLFEPTFSGGSALEHQNSHVGI
                     YQPEFIGTPILASITAHEIFHGWNVKRLRPADLWPYRYDQPQQTVWLWVSEGITDYYA
                     DLALVRGGVVDSAGFLALTQEKIDQVYDAPAVSLEDASLSTWISPTDGTSSIYYPKGA
                     LAGLLLDLIIRDASDNRQSLDHVMRDLYQRAWKAGRGFTAEDWWSAVRQAAGGRSFEH
                     FAERYIDGRDEFPWSEVLPLAGFRLSQDSVREPRIGISTSADSSSGAVIVTQVVPAGM
                     GAEAGLEPGDRLISVGDITVAGADFGVQFRRRYAAEPEGVVVPIVVERAGRRQSLQGR
                     LRQAVRVVRQFQFDPAPSAKAARIRKSLLGG"
     gene            3327..4556
                     /locus_tag="VGA78_02330"
     CDS             3327..4556
                     /locus_tag="VGA78_02330"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX9892725.1"
                     /translation="MNDPATPSIVVMTRNMYLGADVDRVIAALSGSSEEDPQAALEAV
                     LQEFIATDPPTRLNALAGEIARFRPHVVGLQEVSGLSVNLPPEFGVPPFQTDFLAGLM
                     QALAARGLSYQVITNQNFRFSLFGGAIVLQDSDALLIDSRLPILSSAGATFSCGQLCI
                     PLPGLGTLKRGWVRARTQFSGRTVTFVSTHPESGEEPRIAQLRAGQMQELMGLLQTVE
                     EPIVLMGDLNDTPGSAMHQVVTGAGFVDVWASLRPSHPGYTCCHATHLQSGSFDHRID
                     YVMVRGGFLNGTGRVVRGAKVQIVGESSDERIQGAFGLIWPSDHGGVVVTLPPAQTLI
                     DPHRPSSTIFDHAPSCSQGPGLLAHLHPLASAGPHHQTAGAGLSLAARDTAPGGGRLC
                     PADAGVQPGRRDGHVAG"
     gene            4444..4881
                     /locus_tag="VGA78_02335"
     CDS             4444..4881
                     /locus_tag="VGA78_02335"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX9892726.1"
                     /translation="MALAYLWPPGIPHQVVGDYVRLTLAFNRGAAMGMSLGEWSRPAF
                     TVIAIVLLGAMGWLYRRTDASNRIQGAVLAFIAAGAVGNLIDRIRHARGVTDFIDLGI
                     GNVRFWTFNVADMGITLGAIALAFTMKEVEGGRRRSKRVEEVL"
     gene            complement(4878..5942)
                     /gene="ada"
                     /locus_tag="VGA78_02340"
     CDS             complement(4878..5942)
                     /gene="ada"
                     /locus_tag="VGA78_02340"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF011964.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HEX9892727.1"
                     /translation="MSVPAFQSLTDNDRWLAVLSRDRQLNASFVYAVRSTGIYCRVGC
                     PSRRPRRPQVEFFPVPAAAEQAGYRACRRCRPREVVGRDPQVALVERACRLLEQAGGE
                     RVTLAALGRALRVSAPHLQRVFTRVTGVSPRSYADTLRSGRLRASLKSGATVSRALYD
                     AGYGSPSRVYEDRAASIGMTPATYREGGAGQRMAWATEPTPLGRVLVAATPRGLCFVS
                     LGDSDQVLEQALAAEFPRALRVRDDKALRGQVREVVERISGRVPHQDLPLDIRATAFQ
                     RAVWQELRQVPAGTTVTYAELARRIGRPSAVRAVANAVASNNLAVVVPCHRVVRSDGE
                     LGGYRWGPERKRRLLQVEGG"
     gene            complement(6117..>9514)
                     /locus_tag="VGA78_02345"
     CDS             complement(6117..>9514)
                     /locus_tag="VGA78_02345"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HEX9892728.1"
                     /translation="LGVALVWLLIGALVLPAFRFSPTAVTLFRLAGYLVLAAVLIRFV
                     ILPLLRRVTDEQIARYIEEQEPGIEALLVSAVEQAEGHPDSVALAEQVVVQAVSHIRA
                     ADDGRRIEARRLRQAAGAAVTLAAAVLAALVIGPTTLKRAGRAFLPWQDAAAATPYAV
                     LVTPGDVTVPKGGDVEIEARLRGFATEQVELLLREGGSPEWQRVPMVPGDSSGTWGFR
                     MFDVTEPVEYVVEANGVRSRRYLVTVADLPAVQNLALELRYPAYTGLATERQDPGGDI
                     AVPRGTSVKFMVASTRPTPAGRVITESGDTIPLKPGNEALLAGELRAARAGWYRIELQ
                     APAGNFVEASLRYRIDVLDDVGPSVVMTKPGRDAQATAVEEVFAEARATDDYGVRKLE
                     LVYRVNGGEEQTASLYQGGGKRLSEVSAGHTFFLEELPLSPGDLITYFARATDNGPNG
                     GRTASSDIYFLRIRPFGKDYRQAEQAGMPGQQGETPEGLSARQREIIAGTFKVQRDRS
                     TSSEQQLREDLALLALTQGRLRERVEGLLEQLRRRNAVNVDSTFAIIQRELEAALPEM
                     QAAENQLGQRKADDALPPEQRSLQHLQRAEEAFREVQVSFGNQGGGGGDSKSEAEDLA
                     DLFELETDKLQNQYETLERGEERERQRELDETLERLRQLAARQQQETERMQRQAGGQS
                     GGQAGSQGGQSGASQRQLAQEAEELARQLERLTRDRANPEAAEAARRLQEAANAMRRA
                     ATGQSNSETESRSAADRLREASRSLEESRRAGMSRSIREASQRAQQLAERQRDIAQDV
                     GRATQGAGRPDMETQRRLSERKDSLAADVGRLEQDLSALGRETRGNRPEAGRQLEESA
                     RGLREDRVQDKIRFSKGLLRGGTPPEYARTLEESIAANIDSAAARIDRAERAMASSDS
                     SGAGRALDRARELVQGLESLNERLRQQQGGPAGGQQQQGGQAGGRSGGQQQDGQAGGR
                     SDGQPRDGQAGGRQSATQQEGGARPGQTAEQNNSASGRPAFVPPGQARQFQRELRERR
                     EAAEALRGEVERMELDPAELDRVIAELKRLETGRLFSDPSGLERLERDVLDRLKAFEF
                     ALRRRVEGDTNRPLVGPADQVPPKFKEMVEEYYRSLAKTGRRN"
BASE COUNT         1540 a         3292 c         3093 g         1589 t
ORIGIN      
        1 ccgatctgta ctcgccccag caactcgcaa ccttccagcg caacacgctg gggaacaatt
       61 atggcggcgt ggggatgcag atcgaatcgc aggatggcct cattaccgtg gtccgggtct
      121 tcccgggaac cccgggcgag atgggcggag tgcaggccgg cgaccggatc atgcaggtgg
      181 acaccacggc cgtcactggc atgaagctgg aggacgtctc cggcaggctg acaggtcagg
      241 cgggcaccaa ggtcaacgtc gccttcgccc gcgagggcat cccggagccg atccgggtga
      301 cgttcacccg cgcggtgatc cgggtcccgg cggtgccata cacgctgatc ctcgaaaacg
      361 gcgtgggcta cctgccattg caacggttca acgagaacgc cgccgaacag gtggagcagg
      421 gactgcaaca gctccggggc aagggcgcca agtcctacct gatcgacctg cggggcaacc
      481 cgggcggaag cctggaccag tcgctcgaga tcagcaatct ctttctcaag cccggagtgg
      541 agatcgccag cgtccggcac cggggcaaga cccccgagat ctaccgggcc aaccgtcttt
      601 ccgtcatcga ctcgtcgtcg gtcatcgttt tgatcgacca atactcggcc tccgcctcgg
      661 agatcgtggc cggcgcgcta caggaccagg accgggctct ggtggtggga atgagctcct
      721 tcggcaaggg actggtgcag accctgttcc cgctcgaagg cggctgggcc atcaagctga
      781 ccaccggcaa gtggtacact ccgagcggcc gctcgattca gggtgagcac aagcagtacg
      841 ccgacggccg cttcgtcgag tacgtccccg acacggccga gaccgattcg gcccgcaagg
      901 ctcggccgca gttcaaatcg gccagtgggc gggtggtctt cggcggcggc ggagtgacgc
      961 cagatgtcgt ggtgaagccc gataccatca ccagtccgga actcgagttc ctcaaggcgg
     1021 cggtggcacc caagcagggc atcatctaca acacggtgta cgcctacgcc cgggagctca
     1081 agaacaccgt caagcccgat ttcaaagtcg agccggcctg gcgggaggag ctgtacaacc
     1141 gcctggtgaa ggccgaggtc aagctcgatc gggcccagta cgatgcggcc gagccgctga
     1201 tcacccgctg gctggaggag cgggttgccc ggattgcgtt tggtgattcg gcctgggtcc
     1261 gccgggcctt gccggaggat cgccagctgg tgacggcact ggactacctg aagaagggtc
     1321 gcaaccagcg ggagctgctg gcgatggcgg cgagagagtc gaaaaatcag taggtcaggc
     1381 ggtcaggtgg tcaggcgtta gggtggatgc gaggagggcg gctttgagag ccgccctcct
     1441 ttttggctac tagccgaatg gtcccagcca ccctaaccgc ctagcagact tttcctgatc
     1501 cttgccgctt tcgccgaggg cgccggatcg aactggaatt gccgcaccac ccgcacggcc
     1561 tggcgcagcc ggccctgcaa cgactgccgc cggccggctc gctccaccac tatgggaaca
     1621 acgactccct cgggctcggc ggcgtaacgg cgacggaact gcactccgaa gtccgctcct
     1681 gccaccgtaa tgtcccccac ggagatgagc cggtcgccgg gctccagccc ggcctcggcc
     1741 cccatccccg ccgggacgac ctgggtcacg atcaccgccc cgctgctgct gtcggcgctg
     1801 gtggagatcc cgatgcgcgg ctcccggacc gagtcctggc tcaaccgaaa gcccgccagc
     1861 ggcaggacct cgctccaagg gaattcatcc cggccatcga tgtagcgctc ggcgaagtgc
     1921 tcgaagctcc tgccgcccgc cgcttgccgg accgccgacc accaatcctc ggcggtaaag
     1981 ccgcgtccgg ctttccaggc ccgctggtac aggtcccgca tcacgtgatc gagcgattgg
     2041 cggttgtcgc tggcgtcccg gatgatgagg tccagcagca ggcccgccaa cgcgcccttg
     2101 gggtagtaga tgctggatgt gccatcggtg ggactgatcc aggtcgatag cgacgcatcc
     2161 tcgagcgaca cggcgggcgc gtcgtacacc tggtcgatct tctcctgggt gagcgccaga
     2221 aacccggccg aatccaccac cccaccccgc accagagcca ggtcggcgta gtagtcggtg
     2281 atcccctcgc tgacccagag ccacaccgtc tgctgcggtt gatcgtagcg atagggccag
     2341 agatcggccg gccgcagccg cttcacgttc cagccgtgga agatctcatg ggcggtgatc
     2401 gaggctagga tcggagttcc gatgaactcg ggttggtaga tcccgacgtg cgagttctga
     2461 tgctccaacg cgctgccacc gctgaaggtg ggctcgaaga ggagcaaggt ggtatagctg
     2521 tcccaggggg tttccccgaa gacttgagtc atcgcaggca ccgagcccgc cagttcccga
     2581 tggaattgct gccgttccac cccccggaac acgccggcgg gccaggaggc cagtcgatac
     2641 catttcccgc cgatctcgct gctgtcgacc tccagccttc cgatgaagaa gggcatgtcg
     2701 accaggtcgt gatagttggt ctcgcgatag ctccccgctg aaccgcggtg catgccggtg
     2761 atcactgtcc acccggcttg ggtcttgacc gtcaccgtgg ccgggaagtt ccggttcatc
     2821 ccctcgggat acagaaagac attggtcccg tttaccagca ggaaatcggt tcgagcccag
     2881 gcgcgggcgt tgtcgagttc atccgcgaaa tacgtgaagc gaagcgtcac cgggccggcc
     2941 cgtaccgggc ggacccgcca ggtgtcgaag tcggccttat cccagcgcaa gaccgtcgcc
     3001 tcctggcggg cctcgaagct cctcacgttg cgcgcgaaat tcgagatctc gtacgctccc
     3061 ggcgtccagg cggggagcga caagcggatc ggcaatgcgg ctgcgacgtc gaacgtcatg
     3121 gtaacatcga gggaccgctg tcgggccgtt gcggcgtcga aacgcagctc gtagtgcacc
     3181 cgcgagatgg gtggcggggc ctggcgcggc ccgacaaggc cgagcgcgag cagggggagc
     3241 gtcgacatca cgatgcgagc ggtcacggcg ggaacatctc ccaagactgg tcgagcggaa
     3301 aatagccgta ccgaggagta ccatccatga acgaccccgc cactccatcc atcgtggtaa
     3361 tgacccggaa catgtacctc ggggccgacg tcgaccgggt gatcgcggca ctctcgggca
     3421 gcagtgagga ggatccgcag gcggcgctcg aggccgtgtt gcaggagttc atcgccaccg
     3481 atccgccgac gcgcctcaac gccctggccg gggagatcgc ccgcttccgg cctcacgtgg
     3541 tgggactgca ggaggtgtcc ggcctgagcg tcaaccttcc accggaattc ggcgtgccac
     3601 catttcagac cgacttcctc gcggggctga tgcaggccct cgcggcgcgg ggcctgtcgt
     3661 accaggtgat caccaatcag aatttccggt tcagcctgtt cggaggcgcg attgtcctgc
     3721 aggactccga cgcgctcctc atcgattcgc ggctcccgat cctcagctcg gccggcgcca
     3781 cattctcttg cggccagctc tgcattccct tgcccggact cggcacgctc aaacggggct
     3841 gggtccgagc ccggacccag ttcagcggtc gcacggtgac tttcgtaagc acgcacccgg
     3901 aatccgggga ggagccccgc atcgcccagt tgcgcgcggg ccagatgcag gagctgatgg
     3961 gcctgctcca gacggtggaa gagccgatcg tgctgatggg tgatctcaac gacacccctg
     4021 gaagtgcgat gcaccaggtc gtcaccgggg cggggttcgt ggatgtctgg gcttccctcc
     4081 ggccgagcca cccggggtac acctgctgcc acgccactca cctgcagagc ggcagcttcg
     4141 accaccggat cgactacgtg atggtcaggg gaggcttcct caacggcacc ggtcgcgtgg
     4201 tgcgcggagc gaaggtccag atcgtcggcg agtcctcgga cgagcggatc cagggagcct
     4261 tcgggctgat ctggccctcg gatcacggcg gagtggtggt gacgttgcca ccggctcaaa
     4321 ccctcatcga ccctcatcga ccctcttcga ctattttcga ccatgccccc agctgctccc
     4381 aaggcccggg tcttctggcc catcttcatc ctctggctag tgctggacct catcaccaaa
     4441 cagctggcgc tggcctatct ctggccgcca gggataccgc accaggtggt gggagactat
     4501 gtccggctga cgctggcgtt caaccggggc gccgcgatgg gcatgtcgct gggtgagtgg
     4561 tcgcggcccg cgttcaccgt catcgcgatc gtgctgctgg gggccatggg atggctctac
     4621 cggcgcaccg acgcgtccaa ccggattcag ggcgccgttc tcgccttcat cgcggccggg
     4681 gcggtgggca acctgatcga ccggatccgc cacgcccgcg gggtaaccga tttcatcgac
     4741 ctcggtatcg gcaacgttcg cttctggacg ttcaacgtcg ccgacatggg gatcacgctg
     4801 ggcgcaattg ccctcgcgtt caccatgaaa gaagtcgaag gcggtcgaag gcggtcgaag
     4861 agggttgaag aggtgcttta gccaccttcg acttgcaaca gccgccgctt ccgttccggt
     4921 ccccaccggt acccacccag ctcaccatcg ctccgcacca cccggtggca tggcaccacg
     4981 acggccaggt tgttgctcgc cacggcattc gccaccgccc gcaccgcgct gggacggccg
     5041 atccggcgag ccagctccgc gtaggtcacg gtcgttccgg cgggcacctg tctgagctcc
     5101 tgccacaccg cccgctgaaa cgccgtggcc cggatgtcga gcggaaggtc ctggtgaggc
     5161 acccgcccgc tgatccgctc caccacttcg cgcacctggc cccgcagtgc cttgtcgtcc
     5221 cggacccgga gcgcccgcgg gaactccgcg gccagggcct gttccagcac ctggtccgag
     5281 tcgcccagac tcacgaaaca gagtccccgc ggggtcgcgg caaccaggac ccgccccagg
     5341 ggggtcggtt cagtagccca ggccatgcgt tgaccggctc cgccttcgcg gtaggtcgcg
     5401 ggcgtcattc cgatggatgc ggcgcgatct tcgtagaccc ggctgggcga gccgtagccc
     5461 gcgtcataca gcgcgcggct gacggtcgcc cctgacttga gtgaggcccg cagccgaccg
     5521 gatcgaagcg tgtcggcgta ggagcgaggc gagacgccgg tgacccgggt aaacactcgc
     5581 tgcagatgag gggcgctgac acggagcgcg cggcccaggg cggccagggt gactcgttcg
     5641 cctccggcct gctccaggag gcgacaggcc cgctccacca gcgccacctg aggatcgcgc
     5701 ccgactacct cacggggacg gcaacgacgg caggcgcggt aaccggcctg ctccgcggcg
     5761 gccggcaccg gaaagaattc cacctgcgga cggcggggcc gccgcgatgg gcaaccgacc
     5821 cggcagtaga tcccggtgga tcgcaccgca tacacgaagg acgcattcag ttgccggtcg
     5881 cggctcaata ccgcgagcca gcggtcgtta tcggtgaggg actgaaaagc gggcacagac
     5941 acattgggct ccggtggttc aaccggaacc atactagtca aaggagggag gaggggctat
     6001 ccgaaatgag ggggcaaagt gaatgcagag tgccgaatgc ccagtgccca tggcagaagt
     6061 gtggcagatg ggagaaccct ctctgctatg ggcactgggc actcggcact ctccgatcaa
     6121 ttcctccgcc ccgtcttcgc caatgatcgg taatactcct cgaccatttc cttgaacttg
     6181 ggcgggacct ggtcggccgg cccgaccagc ggccggttgg tgtcgccctc gactcgacga
     6241 cgcaacgcga attcaaacgc cttgagccgg tccaggacgt cgcgctccag ccgttcgagg
     6301 ccgctgggat ctgagaacaa ccgtccggtc tcgagccgct tgagctcggc aatgacccgg
     6361 tccagctcgg ccgggtcgag ctccatccgc tcgacctcac ctcgcagcgc ttcggccgct
     6421 tcgcgccgct cccgcagctc ccgctggaac tggcgagcct ggcccggcgg cacaaaagca
     6481 ggccgtcccg atgcagagtt gttctgctcg gcggtctgcc ccggacgcgc accgccttct
     6541 tgctgggtcg cagactgccg cccgcccgcc tgtccgtctc gtggctgtcc gtcagaccgt
     6601 ccgcccgcct gtccgtcctg ttgctgtccg cctgaccgcc cgcccgcctg tccgccctgt
     6661 tgttgttgcc cgcccgccgg cccgccctgt tgttgccgca gccgttcgtt cagagactcc
     6721 aatccctgga ccagctcccg agcccgatcc agggcccgtc cggcaccgct ggaatcgctg
     6781 gacgccatcg cccgctcggc ccggtcgatc ctggccgcag cgctgtcgat gttggccgct
     6841 atggattcct ccagcgtacg ggcatactca ggcggcgttc caccccgcag cagtcccttc
     6901 gagaaccgga tcttgtcctg cacccgatcc tcgcgaaggc cccgagccga ctcctcgagc
     6961 tgacggcctg cttccggccg gttcccgcgg gtttcgcgac ccagcgccga gagatcctgc
     7021 tccagccgcc cgacatcggc ggccaggctg tccttgcgct ccgacaaccg gcgttgggtt
     7081 tccatgtcgg ggcgaccggc gccctgggtg gcgcggccga catcctgtgc gatgtcccgc
     7141 tgccgttcgg ccagctgctg ggcccgctga gacgcctcgc ggattgaccg cgacatgccg
     7201 gcccgccggc tctcctccag ggaccgggag gcctcgcgca accggtcggc cgcggagcgc
     7261 gactcggtct cactgttgga ctggccggtc gcggcgcgcc gcatcgcgtt ggcggcctcc
     7321 tgcagccgcc gagccgcctc ggccgcttcg ggattggctc gatcacgagt cagccgctcc
     7381 agctggcgag ccagctcctc cgcctcctgg gccagctgcc gctggctggc tccggattga
     7441 cccccttgac ttcctgcctg cccgccagac tggccgcccg cctgccgttg catccgctcg
     7501 gtttcctgct gctgccgggc tgccagctgg cgcagccgct ccagagtttc gtccagctcc
     7561 cgctgacgct cgcgctcctc acctcgttcc agcgtttcgt actggttctg gagtttgtcg
     7621 gtctcgagct cgaagagatc ggccaggtct tcggcctcgg acttcgagtc accacctcca
     7681 ccaccctggt tgccgaagct gacctgcact tcgcggaagg cctcttcggc ccgctgcaga
     7741 tgctgcagcg accgctgttc cggcggcagc gcgtcatccg ctttccgctg gcccagctgg
     7801 ttctcggccg cctgcatttc cggcagcgca gcctcgagct cgcgctggat gatggcgaac
     7861 gtggaatcga cgttgaccgc gttgcgccgc cgcagctgct ccagcaagcc ttcgactcgc
     7921 tcccgcagcc ggccctgggt cagggccagc agggccagat cctcccgcaa ctgctgctcg
     7981 ctcgaggtgc tccggtcgcg ctgcaccttg aaggtgccgg cgatgatctc gcgctgccgg
     8041 gccgaaagcc cttccggggt ttcgccttgc tgtccgggca tgccggcctg ctcggcctgg
     8101 cgatagtcct tgccgaaggg acggatccgc aggaagtaga tgtccgaaga cgcggtgcgt
     8161 ccgccgttgg ggccgttgtc ggtggcccgg gcgaagtagg tgatcagatc acccggggac
     8221 agggggagct cctccaggaa gaacgtgtga ccggcgctga cttcgctcag ccgcttcccg
     8281 cctccttgat agagcgacgc agtctgctct tccccaccat tcacccggta caccagctcc
     8341 agcttgcgta ctccgtaatc atcggtggcc cgggcctcgg caaacacctc ttccaccgcg
     8401 gtcgcctgcg catcacgacc cggtttggtc atcactaccg acggcccgac gtcgtcgagc
     8461 acgtcgatcc ggtagcgcag cgacgcctcc acgaaattgc cggcgggcgc ctgcagctcg
     8521 atgcggtacc agccggcccg cgccgcgcgc agctctccgg ccagcaatgc ttcattgccc
     8581 ggcttgaggg gtatggtgtc gccggattcg gtgatcaccc gacccgccgg cgttgggcga
     8641 gtggacgcca ccatgaactt gacgctggtg ccgcggggga ccgcgatatc gccgccggga
     8701 tcctgccgct cggtggccag cccggtgtaa gccgggtaac gcagctccag cgccaggttc
     8761 tggacggccg ggaggtcggc cacggtgacg aggtagcgac gcgagcgcac gccgttggcc
     8821 tccaccacgt attcgaccgg ctcggtcaca tcgaacatcc ggaagcccca ggtcccgctg
     8881 gagtcgcccg ggaccatggg gactcgctgc cattccggtg aaccaccttc gcgcagcagc
     8941 agttccactt gctcggtggc gaagccgcga agccgggcct cgatttccac gtccccgccc
     9001 ttcgggacag tgacgtcccc cggcgtgacc agcacagcgt agggagtcgc cgcggcggca
     9061 tcctgccacg gcaggaaagc ccgaccggcg cgcttgagcg tggtgggccc gatcacgagg
     9121 gccgcgagga ccgccgcggc cagcgtgacg gctgctcctg cggcctgtct gagccggcgg
     9181 gcttcgattc ggcgtccatc atcggcggcg cggatgtggg agacggcctg caccactacc
     9241 tgctccgcca gcgccaccga atcgggatgt ccttcggcct gctcgaccgc gctcaccaac
     9301 aaggcttcga tgcccggttc ctgttcttcg atatagcgag cgatttgttc atcggtcacg
     9361 cgccggagca acggcaggat gacgaagcgg atcagtaccg cggcgagaac caggtatccg
     9421 gcaaggcgga acagcgtgac tgcggtcgga ctgaaacgga aggccgggag gaccagcgcc
     9481 ccgatcagga gccagacgag cgccactccc agga
//
LOCUS       DASWKS010000067         3887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2612971, whole genome shotgun sequence.
ACCESSION   DASWKS010000067 DASWKS010000000
VERSION     DASWKS010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3887
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2612971"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VGA78_02350"
     CDS             complement(<1..293)
                     /locus_tag="VGA78_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892729.1"
                     /translation="MVGGLLVAVAVFQGVNVAPVAGPRRTTALARAVSVAPKLDGRLD
                     DAVWSEAVVLGDFVQREPDEGRPASEPTEVRVVYTGAALFIAVRAFDSLPDQIA"
     gene            complement(503..1273)
                     /locus_tag="VGA78_02355"
     CDS             complement(503..1273)
                     /locus_tag="VGA78_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX9892730.1"
                     /translation="MPDLRVLIVDDEPLARERIRELLARETGIQVVAEARNGAEAAVM
                     AAEHEPDVVFLDVQMPEVDGFGFLELLGPERTPVTVFVTAFDQYALRAFEVHALDYLL
                     KPFDRERFQRALQRARDVLGGRETRAMSHRIAAMLAELTPERRYAERLVVKTADKTIL
                     VRTDEVDWIEAAANYLRLHRGRDVHLLRETMSSIESRLDPSRFVRIHRSTIVNLDRVA
                     HLESWFHGDYCVKLADGTALTLSRTYRDRFEERLGRPL"
     gene            complement(1266..2399)
                     /locus_tag="VGA78_02360"
     CDS             complement(1266..2399)
                     /locus_tag="VGA78_02360"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX9892731.1"
                     /translation="MEFRASVGPRWSLIGLYFAGWTVVGIAFAVQNYAASAMKGYPII
                     WQEATAWSFNDWAGWALVAPLGVYGARRWAMASDTWRRHLPIHLGLMLVAVAAHAFLV
                     YGAELLEDIFYYPAMPFWEGYRYYLIKKSAFDGIVYWAVVGFVHALSYYQLYRERELR
                     ASQLETRLARTQLQVLRAQLQPHFLFNTLNSISALMHRDVESADRMVTRLGDLLRLSL
                     THTERQEVPLRQELDFLERYLDIQRTRFRDRLSAKVDADPAALDALLPSLILQPLVEN
                     AIRYGIEPRAAPGRVEIRARLDDDRLVIEVEDDGPGLPLAAQKDPNGGCGIGLANTRA
                     RLEQLYGDRQQFSLVNGGGRGLVVRLAIPYRVGQLPTPVATHA"
     gene            2644..3231
                     /locus_tag="VGA78_02365"
     CDS             2644..3231
                     /locus_tag="VGA78_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HEX9892732.1"
                     /translation="MPTSSIPGEVTRLLDQLRGGDRTALDRLFPLVYQELRLAADRVL
                     RREAPGHTLQPTALVHETFLKLAGGPVSSENRAHFLGIAARAMRQVLVDHARRRRAAK
                     RGGGDVAVSLSEADGAWDVQSDELVALDEALERLGEHSERLRRVVELRFFGGLTEEET
                     AQTLGVTTRTIQRDWSKARAWLHKELAAGRSDREA"
     gene            3228..>3887
                     /locus_tag="VGA78_02370"
     CDS             3228..>3887
                     /locus_tag="VGA78_02370"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9892733.1"
                     /translation="MSGPEARWARIEALFDGALERPRTERAAWLGAAAAADPGLRDEV
                     WAMLAAHDQVDGVLDRPLPIPSIPAGIPPGFAQAIADRYVLAEPIGEGGMAHVILALD
                     RSSDRLVVIKVLKPEIATWFGADRFRTEVELAARLSHPHILGLIDSGESGEFLYYVMP
                     YLGGETLRSRLQRQGRLDRAEAIGLLRDLADALAYAHRAGVVHRDLKPENVLCAGGRA
                     LL"
BASE COUNT          634 a         1343 c         1324 g          586 t
ORIGIN      
        1 gcgatctggt cgggcaggga atcgaaggcg cgcaccgcga taaagagcgc ggcgccggtg
       61 tacaccaccc ggacctcggt gggctcggag gcgggccggc cctcgtccgg ctcgcgttgc
      121 acgaagtcgc ccagcaccac ggcctcggac cagacggcgt cgtcgagccg cccatcgagc
      181 ttgggcgcga cactcaccgc ccgggccagc gcggtcgtcc ggcgcggccc cgccaccggg
      241 gcaacgttca ccccctgaaa caccgcgacc gcaaccagca gaccgcccac catcgaggga
      301 tccgtcgtct ctgacgattg ccacgatacg gtgagaccat cgaccattca ggtagtttgg
      361 gatcaaatgc cttgggggag ggatgagcgg ggaatgaatg cagaatgccc agtgcccaat
      421 gcccatcgca gaagtatggg aattaggaga acctctccca tccccctctg cattgggcac
      481 tgggcattgg gcactctgca ttctataggg gccgcccgag ccgctcctcg aaccggtccc
      541 ggtaggtccg gctcaacgtc agcgcggtgc catcggccag cttgacgcag tagtcgccgt
      601 gaaaccagga ttccaggtgg gcgacccggt ccaggttcac gatggtggaa cggtgaatgc
      661 ggacgaaccg ggaggggtcg agccgggact cgatggagct catcgtctcg cgcaggagat
      721 ggacgtcgcg gccccggtgg agcctgaggt agttggccgc ggcctcgatc cagtccacct
      781 cgtcggtccg caccagaata gtcttgtcgg cggttttcac caccagccgt tcggcgtagc
      841 gccgctccgg ggtcagctcc gccagcatcg cggcgatccg gtggctcatg gcgcgggttt
      901 cccgcccgcc taacacatca cgggcccgtt gcagcgcccg ctggaaccgc tcccggtcga
      961 acggtttgag caggtagtcc agggcgtgca cctcgaaggc gcggagcgcg tactgatcga
     1021 acgcggtgac gaacaccgtg accggggtcc gctcggggcc cagcaactcc aggaacccga
     1081 aaccgtccac ttcgggcatc tgcacgtcga ggaacaccac gtccggctcg tgctccgcag
     1141 ccatcaccgc cgcctcggcg ccattcctgg cctcggccac gacctgaatg ccggtctcgc
     1201 gggccagcag ctcgcgaatg cgttcccgcg ccagcggctc gtcgtcgacg atcagcaccc
     1261 gcaggtcagg catgggtcgc caccggggtc gggagctggc ccacccggta ggggatggcc
     1321 agccgcacca ccagtccgcg gccgcctccg ttcacgagac tgaactgctg ccggtcgccg
     1381 tagagctgtt ccagccgggc ccgggtgttg gccaggccga tcccgcagcc gccgttgggg
     1441 tctttctggg cggcgagcgg gagccccggc ccatcatcct ccacctcgat caccagccgg
     1501 tcgtcgtcga gtcgggcccg gatctccacc cgtccgggag ctgcgcgggg ctcgatcccg
     1561 tagcggatgg cgttctccac cagcggctgc aggatcagac tcggcagcag cgcatcgagc
     1621 gcggccgggt ccgcgtccac cttggcgctg agccggtcgc gaaagcgggt tcgctggatg
     1681 tcgagatagc gctccaggaa gtcgagctcc tgccgcagcg gcacttcctg gcgctcggtg
     1741 tgggtgaggc tcaaccgcag caggtcgccc agtcgggtca ccatccggtc cgccgattcc
     1801 acgtcgcggt gcatcagggc ggaaatgctg ttcagggtgt tgaagaggaa gtggggctgc
     1861 agctgagccc ggagcacctg cagctgggtg cgggccagcc gggtctccag ctgggaggcg
     1921 cggagctccc gctcccggta cagctgataa tacgagagcg cgtgcacgaa gccgacgacg
     1981 gcccagtaga cgatcccgtc gaacgccgac ttcttgatca gatagtagcg atacccctcc
     2041 cagaagggca tggcggggta gtagaagatg tcctccagca gctccgcgcc gtacaccaga
     2101 aacgcgtgcg cggcaacggc taccagcatc aatcccaggt ggatcggcag gtggcgccgc
     2161 caggtgtcgc tggccatcgc ccagcgccgg gcaccataga cgccgagcgg cgccaccagg
     2221 gcccaaccgg cccagtcatt gaacgaccag gcggtggcct cctgccagat gatgggatag
     2281 cccttcattg cgctcgccgc atagttctgc acggcgaagg caatgccgac cacggtccac
     2341 ccggcgaaat agagcccgat cagggaccag cggggaccga cggaggcgcg gaattccacg
     2401 atgaggaacg taccggccgg ccccgattcc ggggagggcg gctgggacgg gagggatcag
     2461 ggaagggatg agagggacga taggaatgca gagtgcccag tgccgaatgc ccatagcaga
     2521 ggttctgcca tctgccctac ttctgcctgg gcattgggca ctgggcactc tgcattcact
     2581 cctccctccc cccggcagcg atggtcctta tattgcccgg cagatccctc ctacctgaac
     2641 ccaatgccca catcctcgat cccgggagaa gtcacccgac ttctcgacca gctccggggc
     2701 ggggaccgca ccgcgctcga ccgtctcttt ccgctggtct accaggagct tcgactggcc
     2761 gcggaccggg tgctccggcg cgaagcgccg ggccacaccc tccagcccac cgcgctggtg
     2821 cacgagacct ttctcaagct ggcgggcgga ccggtctctt ccgagaaccg ggcccatttt
     2881 ctgggcatcg cagcgcgggc catgcggcag gtgctggtgg atcacgcccg tcgccgccgg
     2941 gcggccaagc ggggcggggg cgacgtcgcg gtctccctct ccgaggccga tggcgcctgg
     3001 gacgtgcaat cggacgagct ggtcgccctg gatgaagccc tggaacggtt aggcgagcac
     3061 agcgagcggc tgcgccgggt ggtggagctg cggttcttcg gcggactgac cgaggaggaa
     3121 acggcccaga ccctgggcgt gaccacgcgc accatccagc gagactggtc caaggcgcgg
     3181 gcctggcttc acaaggagct ggccgccggc cggagcgacc gagaggcatg agcggaccgg
     3241 aggctcgctg ggccaggatc gaggcactgt ttgacggcgc gctcgaacgg ccccggaccg
     3301 agcgggcggc gtggctcggc gccgccgccg ccgccgatcc gggcctgcgc gacgaggtct
     3361 gggccatgct ggccgcccac gaccaggtgg acggggtgct ggaccggccc ctgccgatcc
     3421 cctcgatccc ggccgggatt ccgcccggat tcgcccaggc gatcgccgat cgttacgtcc
     3481 tggctgagcc gatcggcgaa ggtggcatgg cccacgtcat cctggccctg gaccgctcct
     3541 ccgaccggct ggtcgtgatc aaggtgctca agccggagat cgcgacctgg ttcggcgccg
     3601 accggtttcg caccgaagtc gagctggccg cccgattgtc ccaccctcac atcctcgggc
     3661 tgatcgactc gggcgagtcc ggtgagttcc tctactacgt catgccctac ctcgggggcg
     3721 aaaccctgcg gtcccggctg cagcgccagg gccggctgga ccgggcggaa gcgatcgggc
     3781 tgctccggga tctggccgac gccctggcct acgcccatcg cgccggcgtg gttcatcgcg
     3841 acctcaagcc cgagaacgtg ctctgcgccg gcggccgcgc cctgctc
//
LOCUS       DASWKS010000068         4771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2613435, whole genome shotgun sequence.
ACCESSION   DASWKS010000068 DASWKS010000000
VERSION     DASWKS010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4771
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2613435"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="VGA78_02375"
     CDS             complement(<1..1136)
                     /locus_tag="VGA78_02375"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9892734.1"
                     /translation="MRATLLRAGCGRVLLAGLLAAPAQAQRPVTLAEALARADRHAYG
                     NRAARAARDLQAAERDRTLQGLLPSVKAEAGWMRTTDPMTAFGFQLRQRSVTQASFSP
                     DRLNHPAAITNFGTGFVAEVPLINPEVWLGRRAAAAATQAAAASAQWTRNQAQVDVVQ
                     AYFGGVLAREQVSALEAGLTAAQSHVRRAQSLLEQGMVTRSDLLLAEVRTGEVEAQLL
                     AARGGAALATRRLALAFGTPDDTALVLPAALPDPDLLTPLLMTDSGVTRADVQAARLG
                     QEAGRRDVSRATALWLPRLNSFGRLDWNTADAPFGSPASWTVGVMASWSLFGGGHELV
                     ERRAAQARAAGAAAMAEAATARALLEQAERRNDLDVAMATLRIAA"
     gene            1274..1624
                     /locus_tag="VGA78_02380"
     CDS             1274..1624
                     /locus_tag="VGA78_02380"
                     /inference="COORDINATES: protein motif:HMM:NF014672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HEX9892735.1"
                     /translation="MKTLLVLNDPPYGTERCYNALRWAGALAKREDCQVRVFLMGDAA
                     GCAKAGQSVPQGFYNLSRMLRVVIQHRGEVGVCGTCLDARGLSEPELVEGVHRRTIGD
                     LADWTDWADKVLVF"
     gene            1637..2794
                     /locus_tag="VGA78_02385"
     CDS             1637..2794
                     /locus_tag="VGA78_02385"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HEX9892736.1"
                     /translation="MAQPKTVIVLGGGTGGLVAANRLRRWLPDSHRVVLIDREGQHLF
                     QPSLLWLALGARRPERIQRPLARLRRKGIEVVQAEVESLDPENRRVRAGSRDFAGDAA
                     IISLGADLAPEVVPGLADAGHDLYTLTGAMALRDALPRLTEGRIVVLTAAPAYKCPAA
                     PYEAAMLIEAALRHRGIRDRVQLDLYAAEPGPMGVAGPQVSLAVRQLVESKGIGYYPE
                     HQVSVVDPGARRLGFTNGVEAGFDLLVYVPPHRVPAVVRQAGLAPEGGWVSVNRSDLA
                     TRFPGVFAIGDVTSVPLAMGKPLPKAGVFAHRQAEVVAANLAAEWSGRGDRQAFNGYG
                     ECFLETGDGRAGFGAGNFYAEPVPQVNLRGPSRRWHWGKLLFELHWLRRWF"
     gene            complement(2823..3770)
                     /locus_tag="VGA78_02390"
     CDS             complement(2823..3770)
                     /locus_tag="VGA78_02390"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX9892737.1"
                     /translation="MEDRLSAGLGTPHLAREGDGPHRAAGTERGLLPLLALLTILVVT
                     AGWWALALWPLPSTAPEWLLRTREICFGSAPDGLPLPGGWILLVGEPIGMLLVLFTVW
                     GGAVHQGLRRLLATWAGRLAVGTIGLAVLLGMGAAGARVAGAQGVRFVAGDAGEGRLV
                     RLNDRAPALRLVDQRGDTVSLQQFRGRPVLVTFAFAHCETVCPLLVRAALETRRRFDA
                     ERLVALVVTLDPWRDTPARLPALAAQWELGTDEYVLSGSVDAVENTLNAWKVPRVRNQ
                     ATGDLIHPSVTYVVEPGGRLVYLTDGSGRGLEKALGGER"
     gene            complement(3755..>4771)
                     /locus_tag="VGA78_02395"
     CDS             complement(3755..>4771)
                     /locus_tag="VGA78_02395"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX9892738.1"
                     /translation="SIWYLLGALTVGAVVLNEKISRTAFVLYILFISMASAHHLLVDP
                     GLGPAWKVVNTSYFMYMAVLASMVHGFTVPAGMELGQRLRGFTAGLFGWLRKAPWGDP
                     GFSALVFSVILFGFIGGITGVTIGTEQINIIAHNTLRVPGHFHATVVAGTALAFFGAT
                     YYLIPLVFRRKVAFWSLARIQPYLFAGGIFVFVMAMTFAGTFGVPRRHWDISFSQAPF
                     GVQFDPAVDVLLAVMALGGLTAAAALFIFVAVAVKSVFFGEPIGELVPGVPVAGLPPG
                     ITNPPRTPADIDRLNQELHAPGRGWRLSPAPGTLVLVGVFLIAFVLYYFVNWKILSVL
                     WKIG"
BASE COUNT          774 a         1679 c         1617 g          701 t
ORIGIN      
        1 gcggcgatgc ggagcgtagc catcgccacg tccagatcgt tccgtcgttc cgcctgctcg
       61 agcagggccc gcgccgtcgc ggcttccgcc atggcggcag caccggccgc ccgggcctgg
      121 gccgcgcgac gttccaccag ctcgtgcccg ccgccgaaca gcgaccagct ggccatcact
      181 cccaccgtcc acgaggctgg gctgccgaac ggtgcatcgg ccgtgttcca gtcgagtcgg
      241 ccgaaggagt tgagtcgggg gagccagagg gctgtggccc gtgacacatc ccgtctgccg
      301 gcctcctgcc cgagccgggc cgcctgcacg tccgctcgag tcacgccgct atccgtcatg
      361 agcagtgggg tgagcaggtc gggatcggga agtgccgccg gcagcaccag cgcggtgtcg
      421 tccggagtgc cgaaggcgag ggccagccgt cgggtcgcca gcgccgcgcc acctcgcgcc
      481 gccaggagct gagcctcgac ttcaccggtt cggacctcgg ccaggagcag gtccgagcgg
      541 gtgaccatcc cctgctccag caacgactgg gctcgccgca cgtggctttg cgccgccgtg
      601 aggccggcct cgagcgcgga cacctgttcc cgtgccagca ccccaccgaa ataggcctgc
      661 accacgtcga cctgggcctg gttcctggtc cattgggccg acgcagcggc cgcctgggtt
      721 gccgccgcgg ccgcccgtcg tcccagccac acctcgggat tgatgagcgg cacctcggcc
      781 acgaagccgg tgccgaagtt ggtgatggcg gcgggatgat tcaggcggtc gggactgaag
      841 gacgcctgcg tcacgctgcg ctggcggagc tgaaacccga acgcagtcat cgggtcggtg
      901 gttcgcatcc acccggcctc cgccttgacc gaggggagca ggccctgcag ggtccgatcg
      961 cgctcggcgg cctgcagatc gcgcgcggcc cgggcggcgc ggttgccgta ggcgtggcgg
     1021 tccgcccggg ccagcgcctc ggccagcgtg acgggccgtt gggcctgcgc cggggcggcc
     1081 agcagccccg ccagcaggac gcgaccgcat ccggcgcgca aaagcgtcgc tctcatgatt
     1141 gatgactata taaccatata ggatttattt caagactccg cgtcccggcg tccgctttcc
     1201 tgcggtcttc acgtcctctt catccgccgc gcctaccatt cgaaatgagc tgcaccgggg
     1261 agtggaggac tccgtgaaga cccttctggt gctcaatgat ccaccctacg gcacggagcg
     1321 ctgctacaac gcccttcggt gggccggcgc actggcaaag agagaagact gtcaggtcag
     1381 ggtcttcctc atgggtgacg ccgccggatg cgctaaggcg ggccaatcgg tgccacaggg
     1441 gttctacaac ctgagccgga tgcttcgcgt ggtgatccag caccggggtg aggtcggggt
     1501 atgcggcacc tgtctggatg cccgcgggct cagcgagccg gagctggtcg aaggggttca
     1561 ccgccggacg atcggggatc tggccgactg gaccgactgg gccgacaaag tgctcgtgtt
     1621 ctgagcggga ggagtcatgg cacagcccaa gacggtgatc gtgctcggag gaggcaccgg
     1681 tggcctcgtg gccgcgaatc gcctgcgccg gtggctcccc gactcccacc gtgtggtcct
     1741 gatcgaccgg gaaggccagc atctgttcca accgtcgctg ctctggctcg ccctgggggc
     1801 acggcggccc gagcggatcc agcggccgct ggcgcggctc cggcgcaagg gcatcgaggt
     1861 ggttcaggcg gaggttgagt cgctcgaccc cgaaaaccga agagtacgag ccgggagccg
     1921 ggacttcgcc ggtgacgcgg cgatcatctc ccttggtgct gacctcgcgc ctgaggtggt
     1981 tccgggactg gccgacgccg ggcatgatct ctacacgctc acgggcgcga tggccctccg
     2041 ggacgcgctg ccgcgcctca cggaaggccg aatcgtcgtg ctcacggccg ccccggcgta
     2101 caagtgccct gcggcaccgt acgaggcagc gatgttgatc gaggctgccc tccgccaccg
     2161 cggcattcgg gaccgggtgc agctcgatct ctatgccgcc gagcccggcc cgatgggcgt
     2221 ggccggtcca caggtctccc ttgcggtgcg tcaactcgtg gagtccaagg gtatcgggta
     2281 ctaccccgag caccaggtca gcgtggttga tccgggagct cgtcgcctcg ggttcaccaa
     2341 cggtgtggaa gccgggttcg acctgctggt ctatgtgcct ccccaccgcg tgccggcggt
     2401 cgtccgtcag gccggtctcg ctcccgaagg gggttgggtg agcgtgaacc ggtccgacct
     2461 cgcgacacga ttccctggtg tcttcgcgat cggcgacgtg acctcggtgc cgctggcaat
     2521 ggggaagccc ctccccaagg ccggggtttt cgcccaccgg caggccgaag tggtcgcggc
     2581 aaacctggcc gcggaatggt ccggccgggg tgaccggcaa gccttcaacg gctacggtga
     2641 gtgcttcctc gagaccggcg acgggagggc gggtttcggg gcggggaact tctacgccga
     2701 gcccgttcct caggtgaacc tccgcggccc gagtcgccgg tggcactggg gcaagctgct
     2761 cttcgagctt cactggctga ggcggtggtt ctagccgggc ctcgcgacgc tccacctcct
     2821 cctcaccgct caccccccag cgccttctcc agcccgcgcc cgctcccatc ggttagatac
     2881 accagccgcc cgcccggctc caccacgtac gtcaccgagg gatggatcag gtccccggtc
     2941 gcctggttgc gtacccgggg caccttccag gcattgaggg tattctcgac cgcgtcgacg
     3001 ctgccgctca ggacatactc gtccgttccc aactcccact gcgccgccag ggctggcagc
     3061 cgggccggcg tatcgcgcca ggggtccagt gtcaccacca gcgccaccag tcgctcggcg
     3121 tcgaatcggc gacgggtctc cagcgccgcc cgaaccagca gcggacacac cgtctcgcag
     3181 tgcgcgaacg cgaacgtgac caacaccggc cggccccgaa actgctgcag cgacaccgta
     3241 tcgccgcgct gatccaccag ccgcagtgcg ggggcgcgat cgttcaaccg taccagcctc
     3301 ccttcacctg cgtcgccggc gacgaagcgc accccttgag cgccggccac ccgcgcgcca
     3361 gcggctccca tgccgagcag caccgccagg ccaatggtcc cgaccgcgag ccgcccggcc
     3421 catgtggcca gcaaccgtcg gagtccctgg tggacggcgc caccccagac ggtgaaaagg
     3481 accagaagca tcccgatcgg ttcacccacg agcaggatcc agccgccggg caacgggagt
     3541 ccgtccggcg cactgccgaa gcagatctca cgagtgcgga gcagccattc gggtgccgtg
     3601 ctcggcaacg gccagagggc caaggcccac cagcccgccg tgaccaccag gatggtgagg
     3661 agtgccagga ggggaaggag gccgcgttcg gtgccggcgg ctcggtgcgg tccgtcgcct
     3721 tcccgagcca ggtgcggggt gccgagtcct gcgctcagcc gatcttccat agcaccgaca
     3781 ggatcttcca gttcacgaag tagtacagca cgaacgcaat caagaagacc cccaccagga
     3841 ccagcgtgcc cggcgccggg ctcaggcgcc agccccgacc cggggcatgg agctcctggt
     3901 tcaaccgatc gatgtcggcg ggggttcgcg gcgggttggt gatgcccgga ggcagccccg
     3961 ccaccggaac gcctggcacc agctcgccga tcggctcgcc gaagaacacc gacttcacgg
     4021 cgaccgcgac gaagatgaag agcgctgccg cggcggtgag cccgcccagc gccatcacgg
     4081 ccagcaacac gtcgaccgcc ggatcgaact gcacgccgaa cggtgcctgg ctgaagctga
     4141 tgtcccagtg gcgcctcggc accccgaacg tccccgcgaa cgtcatcgcc atcacgaaca
     4201 cgaatatgcc gccggcgaac agatagggct ggatccgcgc cagcgaccag aacgccacct
     4261 tccgccgaaa cacgagcggg atgagatagt aagtggcgcc gaagaaagcc agggcggtgc
     4321 cggcgaccac ggtggcatga aagtgccccg ggacccgcag ggtgttgtgg gcgatgatgt
     4381 tgatctgctc ggtcccgatg gtcaccccgg tgatcccgcc gatgaagccg aagaggatga
     4441 ccgagaagac cagggcgctg aagcccgggt ccccccaggg cgccttccgc aaccagccga
     4501 acaagcccgc ggtgaatccc cggagccgct gccccagctc catccccgcc gggacggtga
     4561 acccgtggac catgctggcg agcaccgcca tgtacatgaa gtagctggtg ttcaccacct
     4621 tccacgctgg cccgaggccg gggtccacca gcaagtggtg ggccgatgcc atggagatga
     4681 agaggatgta gaggacgaac gcggtgcggc tgatcttctc gttcagcacc accgcgccca
     4741 cggtgagcgc gcccagcagg taccagatcg a
//
LOCUS       DASWKS010000069         2252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1505769, whole genome shotgun sequence.
ACCESSION   DASWKS010000069 DASWKS010000000
VERSION     DASWKS010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1505769"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..627)
                     /gene="dcd"
                     /locus_tag="VGA78_02400"
     CDS             complement(49..627)
                     /gene="dcd"
                     /locus_tag="VGA78_02400"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEX9892739.1"
                     /translation="MSIKSDRWIRRMAQEHNMIEPFTERQVRQTDAQGRRVISYGVSS
                     YGYDMRVAPEFKIFTNVLSAIVDPKEFDARSFEEFEGPVCIVPPNSFALARSVEYFRI
                     PRNVLTICVGKSTYARCGIITNVTPFEPEWEGHVTLEISNTTPLPAKIYANEGICQVL
                     FFEADEDDICEVSYADKEGKYQGQKGVTLPRL"
     gene            883..1248
                     /gene="ndhC"
                     /locus_tag="VGA78_02405"
     CDS             883..1248
                     /gene="ndhC"
                     /locus_tag="VGA78_02405"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX9892740.1"
                     /translation="MLQPYIPVLLLVAFVVANAILMLALSHVLSSYRRTPTKIAPYES
                     GMPVLGDARERFSVKFYLVAMLFIIFDIETVFMIPWAVAFRQMSEIAGLLIIEMFVFI
                     VILAVGYVYIWKRGALQWD"
     gene            1239..1868
                     /gene="nuoB"
                     /locus_tag="VGA78_02410"
     CDS             1239..1868
                     /gene="nuoB"
                     /locus_tag="VGA78_02410"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEX9892741.1"
                     /translation="MGLTNPAGQNRGDEITSVAAVSPNWVTTRLDALTNWARANSLWP
                     MPFGTACCAIEYMATAASRFDIARFGMERQSFSPRQADVLICAGRLPFKLAPVIRRIW
                     DQMPQPKWSISMGACASSGGIFDNYSMVQGIDTIIPVDVYVPGCPPRPEGLMYGILLL
                     QKKIKGESFTDKSLRDEKLVGPSGLFLPPERVDELSEPFGNSVHQTRSA"
     gene            1990..>2252
                     /locus_tag="VGA78_02415"
     CDS             1990..>2252
                     /locus_tag="VGA78_02415"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX9892742.1"
                     /translation="MSSTSPSVPALRAEFGPAIERHFVSCGDTIVYASKARSHDVLAW
                     LKDTPGQQYDYLTDVTAVEYRDPERPLEVVYQLRSLPRRADLRV"
BASE COUNT          351 a          758 c          736 g          407 t
ORIGIN      
        1 gggctcgagg gatgggactg ggcccgggcg acgccgggcg agtagccgct acagccgcgg
       61 cagcgtcacg cctttctgtc cctggtactt gccttccttg tcggcgtaac tgacctcgca
      121 gatatcgtcc tcatcggcct cgaagaagag gacctggcag atgccctcgt tcgcgtagat
      181 cttggccggc agcggcgtgg tgttgctgat ctcgagcgtc acgtgacctt cccactcggg
      241 ctcgaagggc gtgacgttgg tgatgatgcc gcagcgcgcg taggtactct tgccgacgca
      301 gatggtgagc acgttccggg ggatccggaa gtactccacc gaccgggcca gcgcgaagct
      361 gttgggaggc acgatacaga ccggaccctc gaactcctcg aagctccggg cgtcgaattc
      421 tttcgggtcc acgatggcgc tcaaaacgtt ggtgaagatc ttgaattccg gcgccacccg
      481 catgtcgtac ccgtagctcg agaccccgta ggagatgacc cgccgcccct gggcatcggt
      541 ctgccgcacc tgccgctcgg tgaacggctc gatcatgttg tgttcctggg ccatgcggcg
      601 gatccagcgg tcggacttga tggacatgga gactccagcg gggcagcggg gcagcggggc
      661 ggcggggcgg tacccgccga ggaggcggca atatagtgac ggtgaaggtg cggggcagcg
      721 gggggagagg gcgatgcccg gcatcggccg gaaccgctgt cagcaggtcg cgttaggacc
      781 gccccgccgg cccgctgccc gctgccccgc ggggttgagt ccccctcgta acggccttac
      841 cttctgcgcg ataggccccg gacaccactc aaccggacac ccatgctgca gccgtatatt
      901 ccggtccttc tgctggtcgc cttcgtggtc gccaacgcga tcctgatgct ggccctctcg
      961 cacgtcctgt ccagctaccg ccggaccccg acgaagatcg cgccgtacga gtcgggcatg
     1021 ccggtcctgg gggacgcgcg cgagcggttt tcggtgaagt tctatctggt cgcaatgctc
     1081 ttcatcatct tcgacatcga aaccgtgttc atgatcccgt gggccgttgc gttccggcag
     1141 atgagtgaga tcgccggcct gctcatcatc gagatgttcg tcttcatcgt catcctggcg
     1201 gtggggtacg tctacatctg gaagcgtgga gcgttgcaat gggattgacc aaccccgccg
     1261 ggcagaatcg cggggacgag atcaccagcg tcgcggcggt gtcgcccaac tgggtgacca
     1321 cccggctcga cgccctcacc aactgggccc gtgccaactc gctgtggccg atgccgttcg
     1381 gcaccgcgtg ctgcgccatc gagtacatgg cgacggcggc cagccggttc gacatcgcgc
     1441 gcttcgggat ggagcggcag tccttttcgc cccgccaggc cgacgtgctc atctgcgccg
     1501 gacggctccc gttcaagctc gccccggtca tccgccggat ctgggaccag atgccgcagc
     1561 ccaagtggtc catctccatg ggcgcttgcg cgtcgtccgg cgggatcttc gacaactatt
     1621 cgatggtgca gggcatcgac accatcatcc cggtggatgt ctacgttccc ggctgtccgc
     1681 cgcggcccga gggcctcatg tacggcatcc tgctcctgca gaagaagatc aagggagaaa
     1741 gcttcacgga caaatccctc cgcgacgaga agctggtcgg cccctccggg cttttcctgc
     1801 cgcccgagcg ggtggacgag ctctcggagc ccttcggcaa ctcggttcat cagactcgct
     1861 cggcatgatg catcggacca cgtggggcct catcccgacc gcagggaggg acccgttgcg
     1921 ccgtgtgccg gcaccgggcc ggcaaggtcc ctcggtcgcg ttgctcactc gggatgaagc
     1981 ggggcaggca tgagctcgac gtccccctcc gtccccgccc tccgcgccga gttcggcccg
     2041 gccatcgagc gccacttcgt ctcctgcggc gacaccatcg tctacgcgag caaggcgcgg
     2101 agccatgacg tcctggcctg gctcaaggac acgcccggcc agcagtacga ctacctcacc
     2161 gacgtgaccg cggtcgagta ccgcgatccc gagcggccgc tcgaggtggt ctaccagctc
     2221 cgctcgcttc cgcggagggc cgatcttcgc gt
//
LOCUS       DASWKS010000070         2226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1506510, whole genome shotgun sequence.
ACCESSION   DASWKS010000070 DASWKS010000000
VERSION     DASWKS010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1506510"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2226
                     /locus_tag="VGA78_02420"
     CDS             <1..>2226
                     /locus_tag="VGA78_02420"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2341 domain-containing protein"
                     /protein_id="HEX9892743.1"
                     /translation="VEVTLSPNEDTTLYMYYGNAAAADQQNVAGTWDGAGAFRGVWHL
                     AEDPSSGAPQFLDSSTNSFNGTANSLTTTNQVEGRVDGSLAFDDSNERHVDNPSSAAL
                     QLSTNITVSAWVKTTDTQSDSGVVAAKWGPSGQRNYWLGKLDASNLAFYVDDTQNVPT
                     SLGLVNDGAWHYVVGVADVSGTLLRIYVDGSQRNTTAYTGSSQTGTGDLHIGNSPDII
                     LQEFDGGIDEVRIAAAARSAEWISAEYSNQNSPAGFYQVLDEELQADVELDLTGNSVT
                     LEAWVQFPANPSGNDGILSKNGFADGYRLVMQGAPPFVSFELTSSAGDLDTSGTLAAG
                     AWHHVVATYDGSTMRVYLDGAQDPTTRAKSGNIDRAGKELWLGHGDHAIEKAWSFPWQ
                     GDLDEVRVSDNARSTAWIGTQFNNQSSPGTFHTVGAEQPWSCVTPTPTATPTDTPTPT
                     ATNTLTPTPTPTNTPTPTATNTSTPTPTATPSGPGWWDCNYQFRQQVTVTAGSAAVPI
                     DYSVRVTFNHAALVSGGKSLASGNDIRVVFWNGASWVELDRMLEPGSAWNNASTALWL
                     KTQAAIGASGSDNNYYIYYGNSGAGAPPANGNNVFVFYDGFETGDLTGWTGNSVGNPG
                     DSITASTLQQYTGSYSGRGSSDTTSPAQGQVWTDPGSRTTLFARIHLFLDPAFFTSDH
                     MTFLQFIDTDSGWRNILAATINDTDDTLYLWNDLAGEAYGFQATTPITRGVWHTIEVQ
                     VT"
BASE COUNT          427 a          812 c          628 g          359 t
ORIGIN      
        1 ggtggaagtg actctctccc ccaacgagga cacgaccctc tacatgtatt acggcaacgc
       61 tgcggcagcc gatcagcaga acgtggccgg tacctgggat ggggccggag cgttccgcgg
      121 ggtctggcac ctggccgaag atccctcttc cggggccccg cagttcctcg acagctctac
      181 caacagcttc aacgggaccg cgaactccct gaccaccacg aaccaggtcg aggggcgggt
      241 ggacggcagc ctggcctttg acgatagcaa cgagcggcac gtggacaatc ccagcagcgc
      301 ggccctgcag ctctcgacta acatcactgt ctcggcctgg gttaagacca ccgacaccca
      361 gtccgactcc ggagtggtcg ccgctaagtg gggcccgagc ggacagcgca actactggct
      421 aggcaaacta gacgcctcga acctggcgtt ctacgtagac gacactcaaa acgtcccgac
      481 ctccctgggt ctggtgaacg atggtgcctg gcactacgta gtgggtgtag cggatgtctc
      541 cggaacgttg ctccgaatct atgtggacgg atctcagcgc aacacgaccg cgtacaccgg
      601 cagctctcag actggcaccg gcgatctgca catcgggaac agccccgaca tcatcctgca
      661 ggaattcgat ggcggaatcg acgaggtccg gatcgccgcc gcggcccgct cggccgagtg
      721 gatctcggcc gaatacagca atcagaacag cccggccggc ttctatcagg tcctggacga
      781 ggagctgcag gccgacgtcg agctcgacct gaccggcaac agcgtcactt tggaagcctg
      841 ggtccaattt cctgccaatc cctccggcaa cgacggaatc ctgagcaaga acggcttcgc
      901 cgacgggtac cggctggtca tgcaaggcgc gccacccttc gtctcgtttg agctcaccag
      961 ttctgctggc gacctcgata cctccggcac gctcgccgcc ggtgcctggc atcacgttgt
     1021 cgccacctat gacggttcga caatgcgcgt gtacctcgat ggggcgcaag atcccacgac
     1081 ccgagcgaag tccggcaaca tcgatcgcgc cgggaaggaa ctctggctcg ggcacggcga
     1141 ccacgccatc gagaaggcct ggagcttccc gtggcagggc gacctggacg aggtccgggt
     1201 ctccgacaac gctcggtcca ccgcctggat cggcacccag ttcaacaacc agtcttcgcc
     1261 ggggaccttc catacggttg gcgccgaaca gccgtggagc tgcgtcacgc ccacgcctac
     1321 cgccactcca accgacacac ccacacccac cgcaaccaac acgctgaccc cgacgcctac
     1381 accgacgaat accccgaccc ccacggcgac caatacttcg acgccgaccc cgaccgccac
     1441 cccatccggc cccggctggt gggactgcaa ttatcagttc cggcagcagg tcaccgtcac
     1501 agccgggtcc gccgcggtgc ccattgacta ctcggtccgg gtgaccttca accacgccgc
     1561 cctggtttcc ggcggcaagt cgctggccag cggcaacgac atccgggtgg tcttctggaa
     1621 cggggccagt tgggtcgaac tcgatcggat gctggagccc ggttcggcct ggaacaacgc
     1681 cagcaccgcc ctctggctca agacccaggc cgccatcggc gcctccggct ccgacaacaa
     1741 ctactacatc tactacggca actccggcgc cggcgcgccg cccgccaatg gcaacaatgt
     1801 cttcgtgttc tatgacgggt tcgagaccgg cgatctcacc ggctggaccg gcaactcggt
     1861 cggcaacccc ggcgactcga tcaccgcctc caccctgcag cagtacaccg gttcctactc
     1921 cggccgcggc tcgtccgaca ccacttcgcc cgctcaaggc caggtgtgga ccgaccccgg
     1981 ctcgcgcacc actttgttcg cccgcattca tctcttcctg gatccggcct tcttcacctc
     2041 ggaccacatg accttcctgc agttcatcga tactgattcc ggctggcgca acatcctggc
     2101 cgccaccatc aacgacaccg acgacacgct ctacctgtgg aacgatctgg ccggcgaggc
     2161 ctacggcttc caggccacca cccccatcac ccgcggggtc tggcacacca tcgaggtgca
     2221 ggtcac
//
LOCUS       DASWKS010000071         5827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1145636, whole genome shotgun sequence.
ACCESSION   DASWKS010000071 DASWKS010000000
VERSION     DASWKS010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5827
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145636"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VGA78_02425"
     CDS             complement(<1..327)
                     /locus_tag="VGA78_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892744.1"
                     /translation="MELCILSRESAECHEPRGLEVCISISDPAASPALLSPGFADVLR
                     LAFNDIQVLENPADVLFGADHASAIVEFVGRWSHADRLVVHCNAGVSRSPGVALGLCD
                     RSGWPAA"
     gene            complement(377..1042)
                     /locus_tag="VGA78_02430"
     CDS             complement(377..1042)
                     /locus_tag="VGA78_02430"
                     /inference="COORDINATES: protein motif:HMM:NF020296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEX9892745.1"
                     /translation="MTARTIGRALRRAPPPSVPAMRVLRRAWSRELRPLPPREVIRLA
                     IQLLDHPGPWSRLVGYELIAHHPGGIQALTPAALRRLSTGLADWGSVDAFACYLSGPA
                     WREGRLPTRQVHAWLRSPDRWLRRTAVVSTVALNVPARGGHGDTARTLAVCRQVVDDR
                     DDMVEKALSWALRSLAPRDPREVARFVARHNDELSARVRREVGTKLRTGRKVERRRTG
                     VAT"
     gene            complement(1059..1820)
                     /locus_tag="VGA78_02435"
     CDS             complement(1059..1820)
                     /locus_tag="VGA78_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892746.1"
                     /translation="MRSMIRGPSQVTAPARYRQLDNAEILATLTRLRDRVAERFPDSG
                     LARVAGELLSLSTETAALVQYVQRPHWPIRLGAGLAILAMALVLVVMVSSLRLSAGID
                     GFAELIQATDAAISSLVFLGITVFFLLTLENRLKRRRALVTLHQLRSVAHVVDMHQLT
                     KDPERITSPHLNTASSPERSLTTAELGRYLDYCSELLSVISKLAALHVQHFNDPVTLA
                     AVNDVETLTTGLSNKIWQKITLLDRTRREPEPPSA"
     gene            complement(1920..2351)
                     /locus_tag="VGA78_02440"
     CDS             complement(1920..2351)
                     /locus_tag="VGA78_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892747.1"
                     /translation="MGMNLGLPADSLLLWGAAGTIFSLAYIRFVWARAPLPIVTRGGT
                     VLAGALLFASLLALLASLNLWRTGQRTSMLGLALLWSAGLPVGIGGCWLALRFAAGTS
                     DRSLTAARAGLALLGFWLGAFGGYLMVAAAALAVVFLFGSR"
     gene            complement(2890..3411)
                     /locus_tag="VGA78_02445"
     CDS             complement(2890..3411)
                     /locus_tag="VGA78_02445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892748.1"
                     /translation="MIFRLRVLGTFILAAVSPLTAQDVPQSPFPSDARYFDFWEGTWY
                     RAVNGQPDTGGTRFIVRRGVHPASWEEEWRLRLDSTTVIAHALRSWDATKGRWGYVWV
                     SSQGHFQVWEGRRVDGDWYIYRPFEFPADRYLSRQAWLPVGPGRVRRISQKSYDGGQT
                     WELRFAEEYVRVR"
     gene            3532..3759
                     /locus_tag="VGA78_02450"
     CDS             3532..3759
                     /locus_tag="VGA78_02450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEX9892749.1"
                     /translation="MVRELKLRQVGGSVGATLPKDMADRLHLAVGDRVLAVETEHGIL
                     LTPFDPAVEAGLAAAARVAKKYRNALRELAK"
     gene            3763..4164
                     /locus_tag="VGA78_02455"
     CDS             3763..4164
                     /locus_tag="VGA78_02455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HEX9892750.1"
                     /translation="MAREPRWVPRLVLDAAHLDQLREHGGLPGIRDENGLEAALVRAR
                     QKWSYQPDTEFAALVAAYGFAITTSHPYRDGNKRAGFLAMAIFAGLNGYELEASDAEV
                     VTVMLGLAAGHVTERELSAWLRDHLVRVKKR"
     gene            complement(4275..>5827)
                     /locus_tag="VGA78_02460"
     CDS             complement(4275..>5827)
                     /locus_tag="VGA78_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9892751.1"
                     /translation="WRSSNPAIASVDRFGNVRAHGTGKVTITAEAEGMKAETSHTIAA
                     NPVRTVELGIRDTSIRTGDVIPLSATARGANGRPVTDVPIVWSYTYAPDDSIIPAGLP
                     GGAGIIQYGRFTGNYPGRYTLMARSGTANAETTIEVRPREARRRISITGRGSINHAHT
                     SDLWPWTAKNGRDYALVGTWGGDGWAYVYDITDLNNPVKTDSVQVDARTINDVTVSPD
                     GRYGALSREGASNRVNGVVILDLADPAHPKVASTFSQELTGGVHNMFATNDHLFAVSG
                     GAKYVIIDVKDLASPKYVSEYRHPNARLHDLWVRDGIAYSAQGGAGTVVVDVGNGKYG
                     GTIENPKLITVYAVNSGHEIFPYVQQATGKTYLFIGDEEMNRSGRVWEGTNYWGEMTT
                     PGGVAQTSGGYTHIVDFTDPMHPKGVGRYHLEDFGSHDIIVEDDVMYQAYYEGGVRVV
                     DVSGELMGNLADQGREIAVFKPYDPKGFTPNASFVMNAMPWKGHVLFTDFNSGLWAAR
                     LQPKPLTP"
BASE COUNT         1004 a         1901 c         1980 g          942 t
ORIGIN      
        1 ggccgccggc cagcccgatc ggtcacagag cccgagcgcg acgccgggag agcggctgac
       61 gcccgcgtta caatgcacca ccagccggtc ggcatgactc caccgcccca cgaactcgac
      121 gatggccgag gcgtggtcgg ccccgaagag cacgtccgcc ggattctcga gcacctggat
      181 gtcattgaat gccagccgca ggacgtcggc gaaacccggc gagagcagcg cgggggatgc
      241 cgcgggatca ctgatcgaga tgcagacctc gagacccctg ggctcgtggc actcggccga
      301 ctcacgtgac agaatgcaca actccatcgc ttccccctcg ccggatcgta tcgccgactc
      361 gggacctggc gccacttcag gtggcaacac ccgtccggcg gcgctcgacc ttgcggccgg
      421 ttcgaagttt ggtccctacc tcgcggcgga ccctcgctga cagctcgtcg ttgtgtcggg
      481 cgacgaagcg tgccacttcc cgggggtccc tcggcgccag tgatcgcagg gcccaggaga
      541 gggccttttc caccatgtcg tcccggtcgt cgaccacctg ccggcagacc gcgagggtgc
      601 gggcggtatc tccatgaccc cctcgggccg ggacgttcag cgccacggtg gagaccacgg
      661 ccgttcgccg cagccagcgg tcgggcgagc ggagccaggc gtgtacctga cgggtcggga
      721 gccggccctc acgccaggcc ggtcccgaca aatagcaggc gaaggcatcc acgctccccc
      781 agtcggccag cccggtactc agccggcgga gcgccgcggg cgtgagcgct tggattcctc
      841 cgggatgatg agcgatcagc tcgtatccga ccaggcgtga ccacgggccc gggtgatcga
      901 gcaattggat ggcgagcctg atgacctcgc gcgggggcag cgggcggagt tcccgggacc
      961 aggcccgtcg cagcacccgc atcgccggga ccgagggagg cggggcccgg cgcaacgccc
     1021 ggccgatggt ccgcgcggtc accccggggc ccggggcgtc aggcgctggg gggctccggc
     1081 tcacggcggg tgcggtccag cagcgtgatc ttctgccaga tcttgttgga caggccggtc
     1141 gtcagggttt cgacgtcgtt gacggcggcg agggtgacgg ggtcgttgaa gtgctggaca
     1201 tggagcgcgg cgagcttgct gatgacggag aggagctcgc tgcaatagtc cagataacgc
     1261 cccagctcgg cggtggtcag cgagcgctcg ggcgacgacg ctgtgttcag gtgaggcgac
     1321 gtgatgcgct cggggtcctt cgtcaactga tgcatatcaa cgacatgcgc gacgctgcgc
     1381 agttgatgca gcgtaaccag cgctctcctc cgtttgagcc ggttttccag ggtcaaaagg
     1441 aagaagaccg tgatgcccag gaacaccagg ctgctgatcg ctgcatccgt ggcctggatc
     1501 agctcggcga atccatcgat cccggccgac agccgcagag aactcaccat cacaaccagg
     1561 accagggcca tggcgaggat ggccaaccca gcgcccagcc ggataggcca gtggggccgc
     1621 tggacgtatt gaaccagggc ggccgtctca gtgctgagcg acagcagttc accggcaacc
     1681 cgggccaggc cggaatcagg gaagcgctcg gcgacccggt cgcgcaagcg ggtcagggtc
     1741 gcgagaatct cggcgttgtc gagttgacgg tatcgcgctg gagccgtcac ttgcgatggc
     1801 ccccggatca ttgacctcat gcggcctgca gccgggggcc ggaagggcgc tcgaattcca
     1861 cctgacagct gccgaggttg ggtaatcgct tggtcatcgg agtaatctgc cgataatcgc
     1921 taccggctcc cgaaaaggaa tacaacggcc agcgcggcgg cggctaccat caggtacccg
     1981 ccaaacgctc ccagccagaa tccgagcagc gccagcccgg cccgggccgc ggtcaaagag
     2041 cgatcgctgg tgccggctgc aaacctgagg gccaaccagc atccaccgat accgacggga
     2101 aggccggcgg accagagcag cgccagccca agcatggaag tgcgctgccc cgtccgccac
     2161 aagttgagcg aggcgagaag ggccagcaaa ctggcgaaca ggagcgcgcc ggcgaggacc
     2221 gtgccccccc tggtaacgat gggcagaggc gcccgggccc agacgaacct gatgtaggcc
     2281 agagagaaga tggtgccggc tgctccccac agcagtagag agtcggccgg gagcccaagg
     2341 ttcatgccca tgagagtaag ctacgagggc cgccggcctc ctgccggccg cgaggaggtc
     2401 agcggcctcg gcgacaggtg gcccggttct ggacgagatc catcctcgag tgatagtcga
     2461 tgctctcgca gtggttccgc cgcgtctgga atgagaacga cccttccgcg atcgatgaac
     2521 tcctggcgcc cgggtcgggt ggaggtaatg ggcaggtccg gtccagccgt cagcttcgac
     2581 ggctgtgcct gggtccgtca ccgtaacgga cggatccggg aaggctggaa ctccgggact
     2641 tcctgggcct gcttgagcgg atgtctcttc tgccggcagg cagcctgggt cttgccctga
     2701 ccggacagct cagccctcat ccgcaggcga tcggtcaggc tgccctggca gaatgaggct
     2761 gggcaacaac gcccaccggc cgatccgcca aatcaagagc aacgtggcgt gagctgacga
     2821 atcagactcg tggccagcgc gtcgcaaggt tcaggacgcg tgcgtggtgg agggagcacc
     2881 gtctcgtctc taacggaccc ggacgtattc ctcggcgaat cgcaactccc acgtctggcc
     2941 cccatcgtag gacttctggc tgatgcgccg gacccggccc ggcccgaccg gcagccaggc
     3001 ctggcgcgac aggtaccgat cggcggggaa ctcgaagggc cggtaaatgt accagtcgcc
     3061 gtcgaccctc cggccctccc agacctgaaa atgcccttgc gagctgaccc acacatagcc
     3121 ccagcggccc ttcgtcgcgt cccagctccg cagtgcatgg gcgatcacgg tggtggagtc
     3181 gaggcgcagg cgccactcct cttcccagga cgcggggtga actccccggc ggacaatgaa
     3241 acgggtgccg ccggtgtcgg gctgcccgtt gactgcgcgg taccaggtgc cctcccagaa
     3301 atcgaagtac cgggcatcgg atgggaatgg cgattgagga acgtcctgcg ccgtgagcgg
     3361 agagaccgcc gcgaggatga acgtcccgag cacgcggagc ctgaagatca taacacctcg
     3421 cagtcgcaag agctccttac ggagatgcgg cgacggaagt gtcagtgaag ccggctcttg
     3481 catgagtagt actgatatgc tactcttcag gaacccgact cggagggacc gatggtccgt
     3541 gaactgaagt tacgtcaggt gggaggctcg gtcggggcca ccctgcccaa agacatggcc
     3601 gatcggctcc acctcgccgt tggggatcgg gtgttggcgg tggagaccga gcatggcatt
     3661 ctcctcaccc ccttcgatcc cgcggtggag gccggtctcg ccgcggccgc gagggtggcc
     3721 aagaagtacc gcaatgccct gcgggagttg gccaagtagg ccatggcgag agagccgcgg
     3781 tgggtcccgc gcctcgtgct ggacgccgcc cacctcgacc agctgcgtga gcatggcggt
     3841 ctcccgggaa ttcgcgacga gaacggcctc gaggcggcct tggtgcgcgc ccgccagaag
     3901 tggagctacc agcccgacac ggagttcgcc gctctggtcg cggcctacgg ctttgcgatc
     3961 accaccagcc acccctatcg cgatgggaac aagcgagccg gcttccttgc catggccatt
     4021 ttcgccggcc tgaacggcta cgagctggag gcttccgacg ccgaggtcgt aaccgtgatg
     4081 ctcggtctgg cggcggggca cgtaaccgag cgcgagctga gcgcctggct ccgcgaccat
     4141 ctcgttcggg tcaagaagag atagtcgacg ccaccgagtt tattgagcca accccgacgc
     4201 tatcgcgatc tcctccgccc gccgctccgt gaactcaagc agttccggga gatccgggtg
     4261 ggtcccaccc aggcctacgg cgtcagcggc ttcggctgga gccgagcggc ccagagtccc
     4321 gagttgaagt cggtgaacag cacgtgcccc ttccagggca tcgcattcat cacgaacgac
     4381 gcgttaggcg tgaaaccttt cgggtcgtac ggcttgaaga ccgcgatctc ccggccctga
     4441 tccgccaggt tccccatcaa ttcgcccgac acgtccacca cccggacccc gccttcgtaa
     4501 taggcctgat acatcacgtc gtcctcgacg atgatgtcgt gcgagccgaa gtcttccagg
     4561 tgataccggc ccacaccctt ggggtgcatc gggtcggtga aatccacgat gtgggtgtag
     4621 ccgcctgagg tctgcgccac tccgccgggt gtggtcatct cgccccagta gttggtgcct
     4681 tcccagaccc ggcccgagcg gttcatctcc tcgtcaccga tgaagagata ggtcttgccg
     4741 gtggcctgct gcacgtaggg aaagatctca tgcccgctgt tcaccgcata cacggtgatg
     4801 agcttggggt tctcgatcgt tccgccgtac ttcccgttgc ccacgtccac caccaccgtg
     4861 cccgcgccgc cctgggccga ataggcgatg ccgtcccgca cccacaggtc gtgcagccgg
     4921 gcgttgggat ggcggtactc gcttacgtat ttggggctgg ccaggtcctt cacgtcgatg
     4981 atcacgtact tggcgccgcc cgagacggca aagaggtgat cgttggtagc gaacatgtta
     5041 tgcaccccgc cggtcagctc ctggctgaag gtcgaggcga ccttgggatg ggccgggtcg
     5101 gccaggtcga ggatcacgac accgttcacc cggttcgacg ctccctcgcg cgagagcgca
     5161 ccatagcgcc cgtcgggcga gaccgtgacg tcgttgatgg tgcgggcatc cacctggacc
     5221 gagtcggttt tcaccgggtt gttgagatcg gtgatgtcgt agacataggc ccagccgtcg
     5281 ccgccccagg tccctaccag ggcgtagtcg cggccgttct tcgcggtcca gggccacaga
     5341 tccgaggtgt gggcgtgatt gatggatccc cggcccgtga tggagattcg gcgacgagcc
     5401 tcgcgcggcc gtacttcgat ggtggtctcg gcgttggcgg ttccggagcg agccatgagg
     5461 gtatagcggc ccgggtagtt gccggtgaat cgcccgtact ggatgatgcc ggcgccgccc
     5521 ggaaggccgg ccgggatgat ggagtcatcg ggagcgtagg tgtagctcca gacgatcggg
     5581 acgtcggtca ctggacgccc gttggcgccc cgtgccgtgg ccgagagcgg gatcacatcg
     5641 ccggtgcgga tcgaggtgtc gcggatgccc agctcgaccg tacgcaccgg gttcgccgcg
     5701 atggtgtggc tggtctcggc cttcatcccc tcggcctcgg ccgtaatggt caccttgccg
     5761 gtcccgtggg cccggacgtt gccgaatcgg tccaccgacg cgatcgcggg gttggagctg
     5821 cgccagg
//
LOCUS       DASWKS010000072         9080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2992817, whole genome shotgun sequence.
ACCESSION   DASWKS010000072 DASWKS010000000
VERSION     DASWKS010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2992817"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            270..1706
                     /locus_tag="VGA78_02465"
     CDS             270..1706
                     /locus_tag="VGA78_02465"
                     /inference="COORDINATES: protein motif:HMM:NF021382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain fatty acyl-CoA regulator family
                     protein"
                     /protein_id="HEX9892752.1"
                     /translation="MPAPIHYGAKIRRLRLAQGLTQAALAARLGISPAYLNLLENGRR
                     RLTPDLLIRLARTFTIDLQEFGPEDDARLVTDLEEVFGEPLFEEAPVDRRDIEAVVVE
                     RPEIARAILRLHHAYNAARSSVETLAARAMDSSELATMDRVRLSSEQVSEFIQRRMNY
                     FPELEEAAEQLWRDARLDRDGLFTGLAQYLEQRHGVTVRIHKVDQMGGAVRRYDPVRK
                     ELLLSEILRRGSRNFQLATQLGLLSYQDPIGRLAEAAELTSDESRALGRLALASYFAA
                     AVLMPYGDFLRDTEEVRYDVELLGHRFRVGWEQVCHRLTTLRRPGSEGVRFHLVRVDI
                     AGNISKKFSVTSVRFPRFSGLCPLWNVHAAFLQPGRIRLQFSRLPDGNALFSVSRTVQ
                     RHAGDYHQPIVLYAVGIGCDVGEASRLVYADGVDLTNLAAAVPIGITCRLCERTNCQA
                     RAFPSLQFPLHIDEHVRGVSFFAPAVEG"
     gene            complement(1707..3485)
                     /locus_tag="VGA78_02470"
     CDS             complement(1707..3485)
                     /locus_tag="VGA78_02470"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX9892753.1"
                     /translation="MTRELQLGGGAIFLTESALSSAPPEGLARLLRGQPGWSDIPVLL
                     LADHGDSPLTAWAVETLGSLTVLERPVRTVTAVTALRSALKARQRQYELRNHLQAQGW
                     LAAVVASSDDAIISKTLEGVMTTWNAGAERLFGYSTAEAIGRPITLLIPEERREEESL
                     ILQRLRRGERIEHFETVRVTKEGHQLDVSLTLSPVLDSYGGIMGISTVARDITARRRE
                     EEARREADRRKDVFLATLAHELRNPLAPIRNAVHILRLASEHDTIPQHLIPIIERQVG
                     HLARLVDDLMEVSRISHGKIELRRERVDLADVVRSALETSRPLIEAGRHELAVTLPSE
                     PVQLFADPVRLTQVIANLLNNAAKFTPDGGRISLSARVEGTAAVITVRDTGIGMSPDL
                     LGSVFDLFIQGERPAQRQTGLGIGLTLVRSLVQLHGGTVEARSEGPGLGSEFILRLPS
                     LRLPGREGPAPESLERSGADPPTGSRRILVVDDSRDAADSLAELLRLMGYEVQLAYEG
                     LTALEAARQYRPDVAVLDLAMPGMDGFELARQLRRVPTGNRMRLIALTGYGQEEFRRR
                     SREAGFDAHFVKPADPGALQAVLTAS"
     gene            complement(3926..4216)
                     /locus_tag="VGA78_02475"
     CDS             complement(3926..4216)
                     /locus_tag="VGA78_02475"
                     /inference="COORDINATES: protein motif:HMM:NF014279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HEX9892754.1"
                     /translation="MAKSTKKKKKAPARKANAAFMRPVQPDAALAEVVGSKPIPRTEV
                     TKKLWAYIKKNDLQDKKNRRMIKADAALKTVFGGKSAVNMFEMTKLVGKHLK"
     gene            4440..5780
                     /locus_tag="VGA78_02480"
     CDS             4440..5780
                     /locus_tag="VGA78_02480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892755.1"
                     /translation="MTSEPAGGSDPLTRANREFAQVYPGERAARQPVHTVYGGGHLFR
                     RDTAPKLGQLARRALQEYGGSADRFGVAVGVAPGLADAVYARVAAKLDREAVEDFRID
                     FEDGYGNRPDSEEDGHVAQAAGEVAAGQLAGMLPAFLGIRVKPLNEELRRRSLRTLEI
                     FLTTLVERGGTLPTGFVITLPKITIPEQVAHVGVALGALEHRLGLPEGTVPLELMVEM
                     PQAIIDAEGRCPLAGLVAAGAGRVRGAHFGTYDYTAGLSITAACQRMSHPACDFAKGV
                     MQVALAGTGVWLSDGATGIMPVPIHRAPEGTTLSPSEQAENRASVHRAWALHYADVRH
                     SLETGFYQGWDLHPAQLPTRYAAIFAFFLEGLEAAGERLRNFLDQAAQATLVGDVFDD
                     AATGQGLLNYFLRAINSGAVSEADATRMTGLTADDFQSRSFGRILERRRPGLSG"
     gene            complement(5770..6609)
                     /gene="pucL"
                     /locus_tag="VGA78_02485"
     CDS             complement(5770..6609)
                     /gene="pucL"
                     /locus_tag="VGA78_02485"
                     /inference="COORDINATES: protein motif:HMM:TIGR03383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004846 - urate oxidase activity [Evidence
                     IEA];
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urate oxidase"
                     /protein_id="HEX9892756.1"
                     /translation="MTRLAWNGYGKAEVRLVKVDRNEAAHLLTDLSVDVQLQGNFESV
                     HTGGDNACVLPTDTMKNTVYALARQGTVDPPEAFAERLGAHFLDACPAATRAVVTLKA
                     HQWERLSVGGAAHRHAFARGSEERRIAVASVGRDRTVVEAGLEGLGLLKTTGSGFSGY
                     LRDRYTTLPETEDRIFATEVTAQWRYGERPLDFAAAWCAVRRALIETFAEHQSASVQQ
                     TLYAMGEQALRACAEAAEIRLVLPNRHHLLVDLRPFGLENPNEVFVATREPYGRIEAV
                     VTR"
     gene            complement(6606..6854)
                     /locus_tag="VGA78_02490"
     CDS             complement(6606..6854)
                     /locus_tag="VGA78_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892757.1"
                     /translation="MPTPEESLEEQREWLRVTLSSIGDAVVTTDTSGQVTFLNPVGER
                     ARKAGFDFHLVKPLDPDQLQQYLVGEGDPALPPFAETS"
     gene            complement(6883..7218)
                     /gene="uraH"
                     /locus_tag="VGA78_02495"
     CDS             complement(6883..7218)
                     /gene="uraH"
                     /locus_tag="VGA78_02495"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR02962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEX9892758.1"
                     /translation="MPSLTTHVLDISLGRPATGLSVRLERFDRAAWTAVAEAMTDIDG
                     RVRDWLPDGVPAGLYRLVFETGVWFARSGRATLYPRVHIDCDLEGDQPHYHVALLLAP
                     FGFSTYRGT"
     gene            complement(7415..7924)
                     /gene="uraD"
                     /locus_tag="VGA78_02500"
     CDS             complement(7415..7924)
                     /gene="uraD"
                     /locus_tag="VGA78_02500"
                     /EC_number="4.1.1.97"
                     /inference="COORDINATES: protein motif:HMM:NF010372.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /protein_id="HEX9892759.1"
                     /translation="MLTLEQLNALPPFDAAEHLRACCGSSRWVEALVAARPFESLEAA
                     LAAADRIWWTTSPEDWNEALVCHPRIGETASQTRVSDTARGWSVKEQEAVAASEESTR
                     RQLDSAIQEYERKFGWIYVVFASGRGAQELLADLHTRMANDPERERMVTAREQLAITE
                     LRLRRMIST"
     gene            complement(7924..8916)
                     /gene="alc"
                     /locus_tag="VGA78_02505"
     CDS             complement(7924..8916)
                     /gene="alc"
                     /locus_tag="VGA78_02505"
                     /EC_number="3.5.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR02961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004037 - allantoicase activity [Evidence
                     IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoicase"
                     /protein_id="HEX9892760.1"
                     /translation="MTSFTDLVDVAAERLGGVVLLATDDFFAPKENLLKPSKPVWKEG
                     VYTDRGKWMDGWETRRRRTPGHDWCIIRLGCRAVPHGVVVDTAFFRGNYPEQCSIDAC
                     VLDHAPDSAALAEDPAIGWKELLPRSPLEGDSENRFAVTSRDPVSHLRFNIFPDGGVA
                     RLRVYGEPVPDPRLRAGVQADLAALTNGGLVLASSDMFFGNRHNLILPGHSTFMGDGW
                     ETQRRRGPGHDWSLLRLASRGSIELIEVDTDHYKGNAPESCSLEVCDAPGATAERLTD
                     GAVAWTTVLARTGLEPDTRHLFSPSAVLPATHARLSIFPDGGIARLRLVGKVAG"
BASE COUNT         1451 a         2979 c         3116 g         1534 t
ORIGIN      
        1 ttcatcggcg cggggcaccg acgggccctc cacccgggcg gcgtcagttt gcagggaggg
       61 ctgggactgc tccaacaggg tcacgtcaag ctccgggtgc tggtccgttc acgtcacgtc
      121 acgatgcagt tgtcatgctg gaaatacagt aatgcgttgt gaggttcagt caagtaacat
      181 attatacagc aatatgttac atcaatgact cttgcgtcaa atcagttgta atgttgtatt
      241 gtgtgtaaat actgtggcga ggactcccca tgcctgcgcc gatccactac ggtgccaaga
      301 ttcgccggct ccgcctcgct caaggcctga ctcaggcggc cctggccgcg cgcctgggga
      361 tttcgccggc ctatctgaac ctgctggaga acgggcggcg ccggctgacg cccgatctgc
      421 tgatccggct ggcgcgaacc ttcacgatcg atctgcagga gttcggaccg gaggacgacg
      481 cccggttggt gaccgatctc gaggaagtgt tcggggagcc gctcttcgag gaggcgccgg
      541 tggaccggcg tgacatcgag gcggtggtgg tggagcgccc cgagatcgcc cgcgccattc
      601 tgcggctgca ccacgcctat aacgccgcgc gcagttcggt cgaaaccctg gcggcccggg
      661 cgatggactc gagcgagctg gccacgatgg accgggtccg gctcagctcg gagcaggtct
      721 ccgagttcat ccagcggcgg atgaactact tccccgagct ggaggaggcg gcggaacagc
      781 tgtggcggga cgcacggctg gaccgggacg gactattcac cggactggcc cagtacctgg
      841 aacagcggca cggcgtgaca gtgcggatcc ataaggtgga ccagatgggc ggggcagtgc
      901 gacgctacga cccggtgcgc aaggaactcc tcctgtcgga gattctccgc cgcggctcgc
      961 gcaacttcca gctcgcgacc cagctgggac tgctgtcgta tcaggatccg atcggccggc
     1021 tggccgaggc ggccgagctg acctccgatg agtcgcgggc gctgggacgc ctggcgctcg
     1081 ccagctattt cgccgccgcg gtgttgatgc cctacggtga tttcctgcgc gacacggagg
     1141 aggtgcgcta cgacgtcgag ctgctgggcc accggttccg ggtcggatgg gagcaggtgt
     1201 gccaccggct caccacgttg cgtcgaccgg gcagcgaggg cgtgcgattc cacctggtcc
     1261 gggtggacat cgccgggaac atctcgaaga agttcagcgt caccagcgtc cggttccccc
     1321 gtttctcggg actctgcccg ctctggaacg tccacgccgc ctttctccag ccgggccgga
     1381 tccggctgca attctcccgc cttcccgacg ggaatgcgtt gttctcggtc tcgcgcacgg
     1441 tgcagcgcca cgcgggcgac tatcaccagc ccatcgtgct gtacgcggtc ggaatcggat
     1501 gtgacgtggg tgaagccagc cggctggtgt atgccgacgg ggtggacctg accaacctgg
     1561 cggccgcggt gccgatcggg attacctgcc ggctgtgcga gcggaccaat tgccaggccc
     1621 gcgcttttcc ctcgctccag ttcccgcttc acatcgacga gcatgtccgg ggcgtatcgt
     1681 ttttcgcccc ggccgtggag gggtgatcag gacgcggtca gcacagcctg gagtgcgccg
     1741 gggtccgccg gcttgacgaa gtgggcgtcg aatcccgcct cgcgggaacg gcgccggaac
     1801 tcttcctggc cgtacccggt gagggcgatc aggcgcatcc ggttgccggt gggaacccgg
     1861 cgcagttgcc gcgccagctc gaagccatcc atccccggca tggccaggtc cagcaccgcc
     1921 acgtcggggc ggtattggcg ggcggcctcc agggcggtca gcccttcata ggccagctgc
     1981 acctcgtatc ccatcagccg cagcaactcg gccaggctgt cggcggcatc gcggctgtca
     2041 tccacgacca gaatccgtcg gctaccagtc ggggggtctg cgcccgaccg ctccagcgat
     2101 tccggcgccg gcccctcccg cccggggagc ctgagggagg gaagccgcag gatgaactcg
     2161 ctgccgagac cgggcccttc gctcctggcc tcgacagtgc cgccgtgcag ctggaccagg
     2221 ctccgcacca gtgtcaggcc gatgcccagg ccggtctgtc gctgggccgg gcgttcgccc
     2281 tggatgaaca ggtcaaagac gctgcccagg aggtcgggcg acatgccgat gccggtgtcc
     2341 cgcaccgtaa tgaccgcagc ggtcccctcg actcgggcgc tcagcgagat ccgtcccccg
     2401 tccggggtga acttggcggc gttgttcagc aggttcgcaa tgacctgggt gagtcggacc
     2461 ggatcggcga acagctggac cggctccgaa ggaagggtca cggccagctc gtgccggccg
     2521 gcttcgatca gcggccggct ggtctccagc gcggaccgga cgacatcagc cagatccacc
     2581 cgttcccgcc gcagctcgat cttcccgtga ctgatccggg acacctccat gaggtcgtcg
     2641 accagccgtg ccagatggcc gacctggcgc tcgatgatcg ggatgagatg ctgcgggatg
     2701 gtgtcgtgct cgctggccag ccgcaggatg tggacggcat tccggatcgg ggccagggga
     2761 ttgcgcagct catgagccag cgtggcgagg aacacgtcct tgcggcggtc ggcttcccgc
     2821 cgcgcctctt cctctctgcg ccgcgcggtg atgtcgcggg cgaccgtcga aatacccatg
     2881 ataccaccgt agctgtcgag caccggcgag agggtaagtg agacgtccag ctggtgaccc
     2941 tccttggtca cccgcacggt ctcgaagtgc tcgatccgct cgcctcgcct gaggcgctgc
     3001 aggatcaagc tctcttcctc gcgccgttcc tcggggatga gcagggtaat cggccggccg
     3061 attgcctcgg ccgtggaata accgaaaagc cgctcggctc cggcgttcca ggtggtcatg
     3121 acgccttcga gcgtcttgct gatgatggcg tcgtccgatg aggccacgac ggccgcgagc
     3181 cacccctggg cttgcaggtg gttccgcaac tcatactggc gctggcgcgc cttgagcgcg
     3241 ctcctgagcg ccgtgaccgc ggtgacggtc cggaccgggc gttcgagcac ggttaggctg
     3301 cctaacgtct ccaccgccca ggcggtgagg ggggagtcgc cgtgatcggc cagcaggagc
     3361 accgggatgt cggaccaccc cggctgaccc cggagcaacc gggccagccc ttcgggcggc
     3421 gcgctcgaca aggcggactc ggtgaggaaa atggccccgc cgcccagctg cagctcccgg
     3481 gtcaagtccg ccagcgttgc acagaagtga ccagccaaac gggcttggtc cagcacggcg
     3541 cggcaccgcg cgcggtcccc ggccgcgggg cccaggacga ggacgcgctc ttccgtgcga
     3601 gcgaggtccg gcggaaggct gctgctcata ctgtctattg aataccaaat ggatttccag
     3661 ggtgcaaggt gcttcgccgg gtgagttcca cgcccaacaa tcaggcgggg gattcgcgag
     3721 gcttccgggt cacatttcgc cccaattcgc agcatttctc ggatgccgac ggggaatttg
     3781 tgctagccat gtcggcgctt cccggtcacg atgttttcgc accgcgagcg ggcggaaagc
     3841 gccaggccgg cggagcacca gcccccgccg gcctgaagct gcgcttcaga agcggctctg
     3901 ttgaaagcga cttggagggg tcctgctact tcagatgctt ccctaccagc ttggtcatct
     3961 cgaacatatt gacggctgat ttgccgccga acacggtctt gagggccgcg tccgccttga
     4021 tcatgcgccg gttcttcttg tcctgcaggt cattcttctt gatgtaggcc cacagcttct
     4081 tggtgacttc ggtgcgcggg atcggcttgg agccgacgac ctcggccagc gcagcgtcgg
     4141 gctgaacggg tctcatgaac gcggcgttgg ccttccgggc aggtgccttc ttcttcttct
     4201 tcgtgctctt ggccatctgg gctccttggg tgggcgatga aaaccatcgt cgcgcagcgg
     4261 tgtgctgcgg ggccgcgggc caggagggcc gggcggcctc gcgaacaatg taagagggaa
     4321 gcggctgcac agccagcggt ttcccccggg ggaaccgcca ggaccgagga ctgaggactg
     4381 agtgctgagt cgtgatagtc cccttagctt ggtggcgttc ctctcctcag gagaccagaa
     4441 tgaccagcga gccggcgggt ggttccgacc ccctcacccg cgcgaatcga gaattcgccc
     4501 aggtgtatcc gggggaaagg gccgcgcgcc aaccggtcca caccgtctat ggcggagggc
     4561 acctgttccg gcgcgacacc gcgcccaagc tgggtcagtt ggctcggcgc gccctgcagg
     4621 aatacggcgg gagtgcggac cggttcggtg tggcggtggg cgttgcgcct ggcctggcgg
     4681 acgcggtgta cgcgcgggtg gcggccaagc tggaccgaga ggcggtggaa gatttccgaa
     4741 tcgatttcga ggacgggtac ggcaatcgcc ccgacagcga ggaggacggc cacgttgccc
     4801 aggcagccgg cgaagtggcg gcggggcagc tggccgggat gctgccggcg tttctgggaa
     4861 tccgggtgaa gccgctcaat gaagagctcc gccgccggag cctccgcacc ctggagatct
     4921 tcctcaccac gctggtggag cgcggaggca ccctgcccac tggattcgtg atcacgctgc
     4981 ccaagatcac cattcccgag caggtggccc acgtcggggt ggccctggga gccttggagc
     5041 atcgtctggg acttccggag gggacggtgc cgctggagct gatggtggag atgccgcagg
     5101 ccatcatcga cgcagagggc cgctgtccgc tggcgggtct ggtggccgcg ggagcgggcc
     5161 gggtgcgggg cgcgcacttc ggcacctacg actacacggc cgggctcagc atcacggccg
     5221 cttgccagcg catgagccat cccgcgtgcg acttcgccaa gggcgtcatg caggtggcgc
     5281 tggccggcac cggggtctgg ctctccgacg gagcgaccgg aatcatgccg gtcccgatcc
     5341 accgcgctcc cgaggggacg accctgtcgc cgtcggagca agcggaaaac cgggcgagcg
     5401 tgcaccgggc ctgggccctg cactacgccg acgtccgtca ctcgctggaa accggcttct
     5461 atcagggctg ggatctgcat cccgcccagc tgccgacccg ctacgccgcg atattcgcct
     5521 tctttctcga aggactggag gccgccggcg aacggctcag aaatttcctg gaccaggcgg
     5581 cgcaggccac gctggtgggc gatgtcttcg acgatgcggc caccggccag ggcctgctca
     5641 actacttcct ccgggcgatc aattccggag cggtcagtga ggcagatgca acccgaatga
     5701 ccgggctcac ggcggacgat tttcagagcc gttcgttcgg gcggatcctg gaacgcaggc
     5761 ggcccggcct cagcgggtga ccaccgcctc gatgcggccg tatggctcgc gggtggcgac
     5821 gaaaacctcg ttgggattct cgagcccgaa gggccgcagg tccaccagga ggtgatgccg
     5881 gttgggcagc accagccgga tctcggccgc ttccgcacag gcgcgcaagg cctgctctcc
     5941 catggcatag agggtctgct ggaccgacgc cgactggtgc tccgcgaagg tctcgatcag
     6001 ggcgcggcgg acggcgcacc aagccgccgc gaagtcaagc ggccgctccc cgtagcgcca
     6061 ttgggccgtg acctcggtag cgaagatgcg atcctcggtc tcggggagtg tggtatagcg
     6121 gtcccggagg tacccgctga acccggaacc agtggtcttg aggaggccca gcccttccag
     6181 gccggcttcg accacggtgc ggtcccggcc gaccgacgcc accgcgattc tccgctcctc
     6241 gctccctcgg gcgaaggcgt gccggtgggc cgcaccgccg acgctcaggc gctcccattg
     6301 gtgggccttg agcgtcacta ccgcgcgggt tgccgccggg catgcgtcga gaaaatgggc
     6361 tcccaaacgc tccgcgaagg cttcaggcgg atcgaccgtt ccctgccggg cgagagcgta
     6421 gacggtgttc ttcatcgtgt cggtgggcag gacgcaggcg ttgtcgccgc cggtatgaac
     6481 cgattcgaag ttgccctgga gctgcacgtc gaccgagagg tcggtgagca ggtgggctgc
     6541 ttcgttccgg tcaaccttca ccaggcgcac ctcggccttg ccatagccgt tccaggccag
     6601 ccgagtcatg aggtttccgc gaaggggggt agtgccggat ccccctcccc gacgagatac
     6661 tgctgcagct ggtcgggatc gagcggcttc accaggtgaa agtcgaagcc cgccttcctg
     6721 gcccgttccc caaccgggtt caggaatgtt acctggcccg aggtatcggt ggtcaccact
     6781 gcatcaccaa tgctagacag cgtgacgcgg agccattccc tctgctcctc taaactctcc
     6841 tctggcgtgg gcacgaaacc tcctagctgc cgaaaagtag cctcaggttc cgcgataggt
     6901 ggaaaaaccg aatggagcga gcaacagcgc gacgtgatag tgaggttgat cgccctcgag
     6961 gtcgcagtcg atgtgcaccc gggggtagag cgtggcccgc ccgctccggg cgaaccagac
     7021 cccggtttcg aagaccagcc gatagaggcc ggccggcacg ccatcgggaa gccagtcccg
     7081 cacccggccg tcgatgtcgg tcatcgcttc cgcgactgcg gtccaggcgg ctcggtcgaa
     7141 ccgttccaat cgcacgctca ggccggtcgc aggacggccg aggctgatat cgaggacgtg
     7201 agtggtgagg gagggcatgg ctgggctcaa gttccgggtt cctagttccg aatgccgggt
     7261 gcggttcaag gtgcggtgcc gcgtgccgtg tgccaggcaa gatccttcgc tgcgctcagg
     7321 attacagcgg tggggtcacg tcaacacgca gcacctcgca cctggcaccg cacgcagcat
     7381 cgcacccggc acctggaacc cggcaccggg aaccctaagt tgagatcatt ctcctgagcc
     7441 tgagctccgt gatcgccaac tgttcccggg cggtcaccat ccgttcccgc tccgggtcgt
     7501 tcgccatgcg agtatggaga tcggccagga gctcttgggc ccctcgtccg ctggcgaaca
     7561 cgacatagat ccacccgaat tttcgctcgt actcctggat cgccgagtcc agctgtcgcc
     7621 gtgtggattc ttccgaggcc gctaccgctt cctgctcctt gacggaccag ccgcgcgccg
     7681 tgtcgctcac ccgggtctgc gacgcggttt caccgatccg ggggtgacag acgagtgcct
     7741 cgttccagtc ttcggggctg gtggtccacc agatccggtc ggccgcggcc agggccgcct
     7801 cgaggctttc gaagggtcgc gcggctacca gcgcttcgac ccagcgcgac gatccgcagc
     7861 aggcgcgcag gtgctcggcc gcgtcgaagg gcggcagggc gttgagctgc tccagcgtca
     7921 gcatcagccg gccactttcc ccaccaggcg gagccgcgcg atccccccgt ccggaaagat
     7981 gctgaggcgg gcgtgggtgg ccggcagcac cgcactgggc gagaagagat gccgggtgtc
     8041 gggctcgagc ccggtgcggg cgagcaccgt ggtccaggcg accgcgccat cggtcagacg
     8101 ctcggccgtg gcgcccggcg catcacagac ttcgagggag cagctctcgg gagcattccc
     8161 cttgtaatga tcggtgtcca cttcgatcag ctcgatactc ccgcgcgacg ccagccgcag
     8221 caggctccag tcgtgtcccg gcccgcgccg ccgttgggtc tcccagccgt cgcccatgaa
     8281 ggtcgagtgg ccggggagaa tcaggttgtg gcggttgccg aagaacatat cgctggaggc
     8341 caggaccagc ccgccgttgg tgagcgcggc cagatcggcc tgaactccgg cccgcagtcg
     8401 cggatcgggg accggctcac catacacccg gagccgggcg accccgccgt cgggaaagat
     8461 gttgaagcgg aggtggctca ccgggtcgcg gctggtcacg gcaaaccggt tctcgctgtc
     8521 cccctcgaga gggcttcggg gaagcagttc cttccacccg atggcggggt cctcggcgag
     8581 cgcggcggaa tccggcgcgt ggtcaaggac gcaggcatcg atggagcact gttcggggta
     8641 gttgccccgg aagaaggcgg tatcgaccac cacgccgtgc ggcaccgccc gacatccgag
     8701 ccgaatgatg caccagtcat gaccgggggt gcgtcggcgc cgggtttccc agccgtccat
     8761 ccacttgccg cgatcggtat agacgccctc tttccacacc ggcttcgacg gcttcagcag
     8821 attctccttg ggcgcgaaga aatcgtcggt ggccagcagc acgacgccac cgagccgttc
     8881 cgcggctaca tcgaccagat cggtgaagga ggtcatgaat ggttgcgtga aaggaggcga
     8941 cccaggaccg ggccatcagg ctcatcgcgc cggaacaccg gttcccctcg aaggtatgtc
     9001 gcgacgacca cgcccgcgag ccggcggccc agccacgggg tgagcggatg gcggtgccgc
     9061 agcacggcct gggacacggt
//
LOCUS       DASWKS010000073        10215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1885605, whole genome shotgun sequence.
ACCESSION   DASWKS010000073 DASWKS010000000
VERSION     DASWKS010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1885605"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /locus_tag="VGA78_02510"
     CDS             complement(<1..756)
                     /locus_tag="VGA78_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX9892761.1"
                     /translation="MRSPGDWIPLLARIADEADAIALRFFRQASLRVDIKADASPVSE
                     ADQAIEAAARRLVVAHHPELGVLGEEEGETGSRDARLILDPIDGTKNYVRGIPVFASL
                     LAIEQGGEVSAGLVSAPALGQRWHAARGAGAWSGERRLRVSAVREWDRAQVFHGSLSG
                     SEGREMPAGLTRLIQRAGRSRGFGDFWQHTLVAEGTGEVAVDPRVAPWDIAALQVIVE
                     EAGGMATTLDGRRSIYGGSLVTSNGVLHQEALAV"
     gene            complement(781..1257)
                     /locus_tag="VGA78_02515"
     CDS             complement(781..1257)
                     /locus_tag="VGA78_02515"
                     /inference="COORDINATES: protein motif:HMM:NF041384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing (seleno)protein"
                     /protein_id="HEX9892762.1"
                     /translation="MLFRVASVLALTAAAAAFPARAQSTAPSTKVLVNTNQEGLALQG
                     YDPVAFFTQNHPVVGLPEITAVHRGATYRFSSTEHRALFQQEPGKYEPAFGGFCAYAV
                     SQGGTAPVDVSTFQILHGRLVLNKNPDVLELFNRDREERYRKAEANWPGIVEKKGR"
     gene            complement(1318..2547)
                     /locus_tag="VGA78_02520"
     CDS             complement(1318..2547)
                     /locus_tag="VGA78_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serpin family protein"
                     /protein_id="HEX9892763.1"
                     /translation="MRAFRSAARTSALLAALACRETGPTEPPPVLQSLPRTLTDGERR
                     AIEAANGFAFALLKRIDQRGADSTQFVSPLSISMALGMALQGARGSTLDAMRATLGFG
                     SMTGEEIGASYRGLIDLLRGLDRQVEFELANSMWVNQNFAVDPAFAEVARRYFAAETG
                     DLDFTAPSSVTTINTWVSDKTRGRITSILESIDPQEVLFLLNAIYFKGTWREGFDPAQ
                     TSDASFSGSGAPQSIRLMHRKGMMPYHDAEGFEAVDLSYGAAAYSMTVLLPKEGRTVN
                     DLVQSLTPEVWSAMTTGFHQAEVDLFLPAFRLEYQRSLKDDLSSLGISAAFDPREADF
                     AGIGADLFLTRVEHKTYVEVDEAGTTAAAVTGVGVGVVSLPRQVTFRVDRSFMFALRE
                     RLSGTILFLGKVTRLPD"
     gene            complement(2593..3777)
                     /locus_tag="VGA78_02525"
     CDS             complement(2593..3777)
                     /locus_tag="VGA78_02525"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HEX9892764.1"
                     /translation="MSTERLYFIDPYLTGFSARIVARSERAGRPAVLLDRSAFYPEGG
                     GQPADHGILNEVRVLDVQAEGEQIWHHLEGPLDDELVQGQIDWPRRFDHMQQHHGQHL
                     LSAAFEELFGLRTVAFHLGSESATIDLAGDAAESELLAAESRTNEVIWEDRPVLARFV
                     SREELAGIPLRKPPVVEGLIRVVSVPDFDHSACGGTHPRTTGAVGLLYLRRRERRGGE
                     TRVEFVCGGRVLRDLRGRGALLARLGTLFTAGVEDLESAVTRLRENEEAGRKRLAHVT
                     ERLLRYEARELVIAASASASSVVRIVRDDLTLDEARLLARFIGEDNCIAVIGVKGEKC
                     QLVMARPSGAERPDCGRIVREVLQRFGGRGGGQPMAAQGGVPDAGLLKNAVDAAAELA
                     GE"
     gene            3888..4301
                     /locus_tag="VGA78_02530"
     CDS             3888..4301
                     /locus_tag="VGA78_02530"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX9892765.1"
                     /translation="MPSGRANRTSRPNPFDVGRRERQIIEVVYRLGRASVSEVHTRLP
                     DPPTYSAVRAMLGKLEDKGFLSHVQDGPRYVYIPAVPAERARKTALRQVVDTFFGGSV
                     EQAVLALVKLPDGEIPDERLGQLAERIRRAREEGR"
     gene            4298..6346
                     /locus_tag="VGA78_02535"
     CDS             4298..6346
                     /locus_tag="VGA78_02535"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX9892766.1"
                     /translation="MITLEWLADAGLRAGAVVLLAGLFVRTVSRNPAALRHLAWTLAL
                     AGALVVPLLARVLPWRLPVVPARSTAVELDGPGQPTPAPGLAEKHKADGGKRESPGYQ
                     SSPVQSSSATVSLRTVAPLVWLAGAALLALRLLGGFVLLAGIARRAREPKTGDWLTLL
                     DRACGRIGVRVVPRLLLSDRITMPCTAGWLRPMILLPSDAITWDEGRREVVLLHELAH
                     LKRRDFLPHMLAQATCAVHWFNPLVWIAAHRMRSDAERACDDLVLSVGARPSDYAAHL
                     LEIVRGSPARRSPAPALPMAQRSEFEGRLLAILESTGERRMPSARAALVVTAFIMTAV
                     LPIAAMGAAPAQPSAVAGVDEGGGDPDRSVQAVDRESARLLVGALEDRVPSVRGAAAE
                     ALGSLRDTLAIRALMEVLRRDPDAGVRRAAAWALGEIEDARAIPALADALRSDTDQEV
                     RRNAAWAMGSIEDAAAVPALAEALRRERDVAIRKTIIEALGSIEDMSVTAGLTPSLKD
                     ADPEIRQAAAEALGSIEDPRSVDELMAAARDDVPEVRRAVIDALGSIEDRRAAPAIAR
                     ALSDSDVEVRRAAADAMGSLDELRQVPRELIAAINDSDAEVRYKVIQALGSFEDPAAV
                     GPLSALLKDEDVQIRRAVIEALDDIKDPAVTRALREALRDADPEVRRMAAKALGNRSR
                     "
     gene            6346..6879
                     /locus_tag="VGA78_02540"
     CDS             6346..6879
                     /locus_tag="VGA78_02540"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9892767.1"
                     /translation="MVTLSRVVVALSLAGGLGTAGPLAAQAAGQEPVRRLLDGLRGAS
                     PVQCELALRSLDFWSGWNHPIPDRDSEAGLVVAWVDRTHKDPAVVAPLAAALKDPDGC
                     VRRLAVRLLGRVRLPAARARLLEALRDTEPETRRLGAIGLGFSNDRTAVPQLVRALQD
                     RDPRVRAAAAWAIGAVH"
     gene            6914..8305
                     /locus_tag="VGA78_02545"
     CDS             6914..8305
                     /locus_tag="VGA78_02545"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9892768.1"
                     /translation="MSRWLIVLGLTPGATLQGSTVQTGTIAIRNVTVIPATGSTPITG
                     ATVVIAAGRIQQIERSAVQLPTGARIVDGTGKFLIPGLFEMHSHVSKARASALGLFVV
                     NGVTTVRDMGGDHQELIRWRREVRAGGRIGPRLLIAGPYLESADNARRQWNTPREEMA
                     EPVERTRIPVGSPADARRVVDSLAALELDHIKIRTVQSRAAWFEIVAAAKARGLSVVG
                     HANAGPDVVVESGQRSVEHGFEPQRLDSLSREERMLLWRRLAAAGVGVVPTLVTVTES
                     GSPAHSHLAAVVSDSLGQVEPRRRYLSRFLLVDWQEQLAEHNAARRAYFRRVWAPALR
                     HLREMCEAGVRIMAGTDVGVLNIYPGFTLHDELAHFVALLGWSPAQAIEAATRQSAEF
                     LGLADSVGTVETGKVADLLLLDADPLQAIRNTRRISAVVLGGKYFDRAALDSLFAAIE
                     SAPDRQVNDWPRP"
     gene            8658..9512
                     /locus_tag="VGA78_02550"
     CDS             8658..9512
                     /locus_tag="VGA78_02550"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9892769.1"
                     /translation="MGLTTSIRQVRYWVKRDWALSRFAAEEDPTIRAIAIALQRTLAG
                     EANPLERVWIERLELHRRELESSNEKITRLDHGAGSPAEHRSPAEMAAGVLVEDSLGR
                     ICRLASKGPSWCTLLFRLVRGLRPDACIELGSCVGVSASYLAAALHLNGKGSLITLEG
                     AESLADKARETLYRHGLTNAEVVTGRFQETFGPSLSRLAPVDFLFIDGHHEEQATLTY
                     FDQARSFTSDRSLFVFDDIQWSDGMGRAWAAISTDQSVDLALDLGPMGLCLVNRRGGR
                     HRTAKIPL"
     gene            complement(9541..10089)
                     /locus_tag="VGA78_02555"
     CDS             complement(9541..10089)
                     /locus_tag="VGA78_02555"
                     /inference="COORDINATES: protein motif:HMM:NF020483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1854 domain-containing protein"
                     /protein_id="HEX9892770.1"
                     /translation="MLKPTVFLARSTLRTAHSVPGRIPILPTLPTFPTLQLGTDGRLW
                     VGSGAEARAVAVRRCFPWSEPDRFISLRDEENREVVLVRDPAELDRESRQALETALAA
                     AGFVLTVTKVISVEEEIEIRHWQVETAQGPRSFQTRLDDWPRTLPGGGVLIRDVAGDL
                     YHVAAPEGLDHRSRELLWAFVD"
BASE COUNT         1635 a         3398 c         3456 g         1726 t
ORIGIN      
        1 caccgcaagc gcctcctgat gcagcacccc gttgctggtc acgaggctgc cgccgtagat
       61 cgaccgtcgt ccgtccagtg tggtggccat gccgccggct tcttccacga tcacttggag
      121 tgccgcgatg tcccaggggg ccacccgggg atccaccgcc acttcgccgg ttccttctgc
      181 caccagggtg tgctgccaga aatctccgaa gccccgactc cggcccgcgc gttggatcaa
      241 gcgggtcagg ccggccggca tctcccgtcc ttcgctgccg ctcaggctgc cgtgaaacac
      301 ttgggcccga tcccactcgc ggacggcgga tacccggagc cgtcgctcgc cgctccaggc
      361 accggcgccg cgggcggcgt gccagcgctg gcctaacgcg ggcgccgaga ccagaccggc
      421 gctgacctca ccgccctgtt cgatcgcaag gagcgacgca aagacgggaa tgccgcgcac
      481 atagttcttg gttccgtcga tcggatcgag aatcagcctg gcatcccgcg atccggtttc
      541 cccctcctcc tcccccagga caccgagctc cgggtgatgg gcgacaacca gtcggcgcgc
      601 ggcggcttcg atcgcctggt cggcctcact caccggactc gcatcggcct tgatatcgac
      661 ccgcagggag gcctgccgga aaaagcggag cgcgatcgcg tccgcctcgt cggcgatgcg
      721 ggcgagaaga gggatccagt ccccgggact tcgcatgccc caaagctact ctggggctcc
      781 ctagcgcccc ttcttctcca cgattccggg ccagttggct tccgctttgc ggtagcgctc
      841 ttcacggtcc cggttgaaga gctcgagaac gtcggggttc ttgttcagaa ccagtcggcc
      901 atggaggatc tggaaggtcg agacatcgac cggcgcggtc cctccctgcg ataccgcgta
      961 ggcgcagaaa ccgccgaaag ccggttcgta tttgccgggc tcctgttgga acaaggcccg
     1021 gtgttcggtc gagctgaacc ggtaggtggc gccccgatgc accgctgtga tctcgggaag
     1081 ccctaccacc gggtgattct gggtgaagaa tgcgaccgga tcgtagccct gcagagccag
     1141 gccttcctgg ttggtgttga ccaggacctt ggtcgatggg gccgtcgact gggcccgggc
     1201 ggggaatgcg gcggccgcgg ccgtcaacgc aagcactgag gcaacgcgaa acagcatgtg
     1261 agggagactc cacgatgtct ggatctgttc caatgtcgtt ccgcggtcga aagttcccta
     1321 gtcgggcaac cgggtcacct tccccaggaa cagaatggta ccggagagcc gctcgcgcag
     1381 cgcgaacatg aaggaacggt ccacccggaa ggtgacctgt cggggcaggg aaaccacccc
     1441 cactcccacg ccagtgaccg cggcggccgt ggtgcctgcc tcgtccacct ccacataggt
     1501 cttgtgctcg acccgggtca agaacagatc cgcgccgata ccggcaaaat cggcttctcg
     1561 cgggtcgaag gccgcagata ttcccagcga tgacaggtcg tccttgagac ttcgctggta
     1621 ttcgaggcgg aatgccggca gaaacaggtc cacctcggcc tggtgaaacc cggtggtcat
     1681 cgccgaccag acctccggcg tcagggactg cactaggtcg ttcacagtcc ggccctcttt
     1741 cggcagcagg accgtcatgc tgtacgcggc ggcaccgtag ctcagatcga ccgcctcgaa
     1801 tccttcggcg tcgtgatagg gcatcatgcc cttgcgatgc atcagccgga tgctctgggg
     1861 cgccccgctg ccgctgaagc tggcgtcgct ggtctgtgcc gggtcgaacc cttcccgcca
     1921 ggtccccttg aaatagatgg cattgagcag gaaaaggact tcctgcggat cgatgctttc
     1981 gaggatcgaa gtgatccggc cgcgggtctt gtccgagacc caagtattga tggtggtcac
     2041 cgagctgggg gccgtgaaat cgagatcgcc agtctcggct gcaaagtagc ggcgggccac
     2101 ttcggcgaac gccggatcga ccgcgaagtt ctgattcacc cacatcgagt tggccagctc
     2161 gaactcgacc tggcggtcga gaccccgcag caggtcgatc aggccgcggt aactggcgcc
     2221 aatctcctcg ccggtcatgc tcccaaaccc cagagtggcg cgcatggcgt cgagggtgga
     2281 gccccgagct ccctggagcg ccatgccgag tgccatggaa atgctcagcg gcgagacgaa
     2341 ttgggtggag tcggccccgc gttggtcgat cctcttcagg agggcaaagg cgaagccgtt
     2401 ggcggcctcg atcgcccgcc gttcgccgtc agtcagggtg cgggggaggg actggagtac
     2461 gggagggggc tcggtaggtc ccgtctcccg gcatgccagg gctgcgagaa gggccgacgt
     2521 tcgggccgcc gaacgaaatg ctcgcatggt tccctcggaa agggacgctc caagtaaaca
     2581 ccggcgactc agctactcgc cagcaagctc cgcggcggca tccaccgcat tcttcaggag
     2641 accagcatcg ggaaccccgc cttgagcggc catcggctgt ccgccgccac ggccgccgaa
     2701 tcgctgcagt acttcacgca cgatcctgcc gcagtcgggc cgctccgccc cggacggtcg
     2761 ggccatcacc agctggcact tctcgccctt tactccgatg acggcgatgc agttgtcttc
     2821 cccgatgaag cgtgccagga gccgggcctc atccagggtc aagtcgtcgc gaacgatccg
     2881 cacgacactg gaggccgagg ccgacgctgc gatcaccagc tcacgcgcct cgtaacggag
     2941 caaccgctcg gtgacgtgcg ccagccgctt gcggccggct tcctcgttct ccctgagccg
     3001 ggtgacggcg gactccaggt cttccacgcc ggccgtgaac agggtgccga gccgggccag
     3061 cagagcgccc cgcccccgaa ggtcccgcaa tacccgaccc ccgcacacga actccacccg
     3121 ggtctccccc ccgcggcgct cccggcgtct caggtacagc agtccgacgg cgccggtagt
     3181 gcggggatgg gttccgccgc acgccgagtg atcgaagtcg ggcaccgaga cgactcgaat
     3241 gaggccctcc accacgggcg gcttgcggag gggaatcccg gccagctctt cccgcgacac
     3301 gaatcgcgcc agcaccggcc gatcctccca gatcacctcg ttggtgcgtg actcggcggc
     3361 gagcagttcc gactcggccg cgtcaccggc gagatcgata gtggcggact cggagccgag
     3421 gtggaatgcc acagttcgga gcccgaatag ttcctcgaac gcggcggaga gcaggtgctg
     3481 gccgtgatgc tgctgcatgt gatcgaatcg gcgaggccaa tcgatctgtc cctggaccag
     3541 ctcatcgtcg agggggccct ccaggtggtg ccagatctgc tctccctcgg cttggacatc
     3601 cagcactcgc acctcgttca gtatcccatg atctgcgggc tggccgccgc cttcggggta
     3661 gaacgccgag cggtccagca gaacggcggg tcggccagcg cgctcggacc gcgcgacaat
     3721 ccgggccgag aacccggtca gatagggatc gatgaaatac agccgttcgg tggacatgaa
     3781 gggccaatat agcggctgtc ccggggtggt cggaggcgcg attgtcgggc ttgacggtcg
     3841 cccgccgtag tgctactgta gcagcaccat gctactgagg tagcaccatg ccgtcgggac
     3901 gcgccaaccg taccagccgc cccaatccgt tcgacgtggg ccgccgggaa cggcagatca
     3961 tcgaggtggt ttatcggctg ggcagggcgt cggtcagcga ggttcatacc cggctacccg
     4021 atcccccgac ctattcggcc gttcgcgcca tgctgggcaa gctcgaggac aagggcttcc
     4081 tgagccacgt gcaggacggc ccccgatacg tatatatccc ggcggtaccg gccgagcgag
     4141 cgcgcaagac ggcgctgcgc caggtggtcg atactttctt cgggggctcg gtggagcaag
     4201 cggtgttggc gctagtcaag ttgcctgacg gcgagatccc ggatgagcgg ttgggccagc
     4261 tcgccgagcg aatccgccgg gcgcgtgagg agggccgatg atcactctgg agtggctggc
     4321 ggatgccggc ctccgggcag gagccgtcgt actgttggcc ggattgttcg tgcgcaccgt
     4381 aagccggaac ccagccgccc tgcggcacct ggcttggact ctggccctgg ccggcgcgct
     4441 ggtggtgccg ctgctggcgc gggtactgcc ctggcggttg ccggtcgtgc cggcccgctc
     4501 gaccgcggtg gaattggacg gaccagggca gccgaccccg gctccggggc tggcggagaa
     4561 gcacaaggcc gacgggggaa agcgcgagtc gccggggtat cagtcgagtc cggtccagtc
     4621 gtcgtcggcg accgtttccc tccgcaccgt ggcgcccctg gtctggctcg cgggagcggc
     4681 attgctggcg ctccggctgc tgggcgggtt cgtgctcctg gccggtatcg cgcgtcgggc
     4741 gcgcgaaccg aagaccgggg actggctcac cctgctcgat cgggcctgcg gccgaatcgg
     4801 ggtacgggtg gtgccgcggt tgctgctgag cgaccgcatc accatgccct gcacggcggg
     4861 ctggctcagg ccgatgattc tcctgccctc cgatgcgatc acctgggacg aggggcgccg
     4921 cgaagtagtg ctactccatg agctggctca cctcaagcgg cgggacttct taccccatat
     4981 gctggcccag gcgacctgtg cggttcattg gttcaatccc ctggtatgga tcgccgccca
     5041 ccgcatgcgg tccgatgccg agcgggcctg cgatgacctg gtgctgagcg tcggggctcg
     5101 gccctcggat tacgccgctc atctgctcga gatcgtgcgg ggctccccgg cccgccggag
     5161 cccggctccg gcgctgccca tggcccagcg ctccgagttc gagggccggc tgctcgcgat
     5221 tctcgagtcg accggcgaac gacgcatgcc ttcagcccga gccgcgttgg tcgtcacggc
     5281 attcatcatg actgcggttc tccccatcgc cgcgatgggt gccgcgccgg cgcagccgtc
     5341 ggcggttgcc ggagtcgacg agggcggcgg agacccggac cgttcggtgc aggcggtcga
     5401 tcgagagtcc gcccgactgc tggtgggtgc tctggaagat cgtgtgccat cggtccgggg
     5461 ggccgccgcc gaagcgttgg ggtcgcttcg ggataccctg gcgatccggg ccttgatgga
     5521 agtgctccgc cgcgacccgg acgccggggt gcgtcgcgcc gccgcctggg cgctgggtga
     5581 aatcgaggac gcgcgggcca tccccgcgct ggccgacgcg ctccgcagcg ataccgacca
     5641 ggaagtccgg cgcaacgcgg cctgggccat gggctccatc gaagatgcgg cggccgttcc
     5701 ggcactggcc gaagcactcc gtcgggagcg cgatgtggcc atccgcaaga ccatcatcga
     5761 ggcgctcggt tccatcgagg acatgtccgt gaccgccgga ctcacgccgt cgctcaagga
     5821 cgcggacccg gagatccgcc aggcggctgc cgaagccctg gggagcatcg aggacccgcg
     5881 ttcggtcgat gagctgatgg cggcggcgcg ggacgacgtg cccgaggtga ggcgggcggt
     5941 gatcgacgcg ctggggtcga tcgaggaccg gcgggccgcg cccgctatcg cccgggcgct
     6001 gtccgacagc gacgtggagg tccgccgggc cgcggccgac gccatgggca gcctcgacga
     6061 gctgcggcag gttccccgcg agctgatcgc ggccatcaac gacagcgacg ccgaggtccg
     6121 gtacaaggtg atccaggcgc tgggcagctt cgaggatccg gcggcggtcg gcccgctgag
     6181 cgcgctgctc aaggacgagg acgtccagat ccggcgggcg gtgatcgaag cgctcgacga
     6241 tatcaaggat ccggccgtga cccgggcctt gcgcgaggcg ctccgggatg ccgacccgga
     6301 agtacggcgc atggcggcca aggcgttagg caaccggtcg cggtgatggt cacgctcagc
     6361 cgggttgtgg tcgccctatc tctggccggt gggctcggca ccgccggccc gctcgccgcc
     6421 caggccgccg gccaggaacc ggttcgccgg ctgctcgacg gcctgcgtgg cgccagcccg
     6481 gtgcagtgcg agctggcgct gcgttcgctc gacttctggt cgggttggaa ccacccgatc
     6541 ccggatcgcg attcggaggc cggactggtg gtagcctggg tggaccggac ccacaaagac
     6601 ccggccgtcg tggcccctct ggccgcggcg ctcaaggacc cggatggctg cgtgcggcgc
     6661 ctggcggtcc ggttgctggg gcgggttcgg cttcctgccg cacgagcccg gctgctggaa
     6721 gccctgcggg acactgagcc ggagacccgc cggctgggtg ccatcggtct cggcttttcc
     6781 aatgaccgca cggcggtgcc gcaactggtt cgagcgctgc aggaccggga cccgcgggtc
     6841 cgggcggccg cggcatgggc gatcggcgcg gttcactgaa cctggggatc acggaccagg
     6901 ccgccccgtg atgatgtcgc gatggctcat agtactgggg ctgactccgg gtgccacgct
     6961 gcagggctcg accgtgcaga ccggaaccat cgccatccgg aacgtcacgg tcattcccgc
     7021 cactggatct accccgatca cgggcgcgac tgtggtgatc gcggccggtc gaattcagca
     7081 aatagaacgg tcggcggtcc aacttccgac tggggcacga atcgtcgacg ggaccgggaa
     7141 gtttctcatc cccggtctct tcgagatgca ttcgcacgtg tccaaggccc gggcttccgc
     7201 cctgggtttg ttcgtagtga acggcgtgac caccgtccgg gatatgggcg gcgaccacca
     7261 ggagctgatc cggtggcgac gggaggtgcg ggccggaggc cggatcggcc cccgcctgct
     7321 catcgccgga ccgtacctcg aatcagccga taatgccagg cggcaatgga atacgccccg
     7381 cgaggagatg gcggagccgg ttgagcgcac tcgaattccg gtcggttctc cggccgatgc
     7441 acgacgggtg gtcgattcgc tggctgcact cgagctggat catatcaaga tccgcacggt
     7501 gcagagccgc gctgcctggt tcgagatcgt cgccgccgcc aaggctcgtg gcttgtccgt
     7561 cgtcggccac gctaacgccg gccctgatgt ggtggtcgaa tcgggccagc ggagtgtgga
     7621 gcacggattc gagccgcaac gactcgatag cctgtcccgc gaggaacgga tgcttctctg
     7681 gcgccgcctg gccgccgcgg gggtcggtgt ggtgccgacg ctggtgacgg tcacggagtc
     7741 ggggtccccg gcgcactcgc atctggcggc tgttgtctcg gattcgctgg gccaggtgga
     7801 accgcgccgc cgctacctct cgcgcttcct cctggtcgat tggcaagagc agctggcgga
     7861 gcacaacgcc gcccggcgcg cctacttccg tcgggtgtgg gccccggcac tccgccactt
     7921 gcgcgaaatg tgcgaagccg gcgtccggat catggccggg accgacgtgg gagtgctcaa
     7981 catctatccc ggcttcaccc tgcacgacga gctggcccat ttcgtcgccc tgctgggctg
     8041 gtcgccggcc caggccattg aagctgccac ccgccagtcc gccgagttcc ttggcctggc
     8101 ggactccgta ggcaccgtgg agacgggcaa agtggcggac ctcctgctgc tcgacgccga
     8161 cccgctccag gccatccgga acaccaggcg catctccgcg gtggtgctcg gcgggaagta
     8221 cttcgaccga gccgcgctcg actccctgtt cgcggccatc gaatcggcgc ccgaccgcca
     8281 ggtcaacgac tggcccagac cctagtgctc gagctccctg ccttggtttc cggccgccgc
     8341 tggctcgatt ccttgacgaa ggtcatccgc agatgacgca gattgcgcgg atacaaacac
     8401 gaattgcttt gggaacgatg atacgttagg cagctttggg cattcgaatg gtgcagtatc
     8461 tgcgccatcg gcgtaatctg cggatagttg tcgatcggcg cttcggatat ccgctacctg
     8521 tttcaatacc aagcgctagc tgccgtgcag aaaccgaagt atcgtgctaa cacggggttg
     8581 tggaaacgca gatctcttcg caccattgag catcctcgca gcacaccgtt ggacgttttt
     8641 cgaacgagct ctccgcgatg ggactgacca catccatcag gcaggtgcgg tattgggtga
     8701 agcgcgattg ggcgctgtcc cggttcgccg ccgaagaaga tcccacgatc agagcgatcg
     8761 ccatcgctct gcaacgcacc ctggccgggg aggccaaccc gctggaacgg gtctggatcg
     8821 aacggttgga gctgcatcgc cgggaattgg agagctcgaa cgagaagatc actcgactgg
     8881 atcatggcgc cgggtccccg gcggagcacc ggtcgccggc ggagatggct gcaggggttc
     8941 tggtggagga ctcgttgggc aggatctgcc gactggccag caagggtccc tcctggtgca
     9001 cgctgctgtt caggctggtg cgaggcttgc ggccggatgc ctgtatcgaa ctgggcagct
     9061 gcgtaggtgt ctccgccagt taccttgccg ccgcgctgca tctcaacggc aaggggtccc
     9121 tgattacgct ggaaggggcc gagtcgcttg ccgacaaggc gagggaaacc ctctaccggc
     9181 acggtctgac caatgccgaa gtggtgaccg gccgattcca agagaccttc ggccccagcc
     9241 tctcccgtct cgccccggtg gattttctgt tcatcgacgg ccatcatgag gagcaggcca
     9301 cgttgaccta cttcgatcag gcgcgctcct tcacctcgga tcggtccctg ttcgtcttcg
     9361 atgatatcca atggtcggac ggaatgggtc gcgcctgggc ggccatctcg accgaccagt
     9421 cggtggatct ggccctcgat ctgggcccga tgggtctctg tctcgtcaat cgccgcggcg
     9481 ggcgtcatcg gaccgcgaag attccgcttt aactagaggg tcgagggggg tcctcgaccg
     9541 ttagtcaaca aacgcccaca acaattcacg gctcctgtgg tccagcccct cgggagccgc
     9601 cacgtgatag aggtcgccgg cgacgtcacg gatcaacacc ccgccaccgg gcagagtgcg
     9661 tggccagtcg tccagccggg tctgaaagct gcgtggaccc tgcgccgtct ccacctgcca
     9721 gtggcggatc tcgatctcct cctccaccga gatgaccttc gtgaccgtca gaacgaaccc
     9781 ggcggcggcg agcgcggtct ccagcgcctg gcgggattcc cgatccagct cggctggatc
     9841 ccgtaccagc accacttcac ggttttcctc atcccgcagc gagatgaagc ggtcgggctc
     9901 cgaccagggg aagcagcgac gcaccgccac tgcgcgtgcc tcggctccgc tcccgaccca
     9961 gagccggccg tcagtcccta actgcagggt cggaaaggtc ggaagggtcg gaaggatcgg
    10021 aatcctcccc ggaacggaat gggccgttcg cagggtcgat cgtgccagaa ataccgttgg
    10081 tttcaacatt ctccctccac tcagtactca gtcctcagtc ctgaggagtt attgaagaac
    10141 cagctgcagg tcgtacagcc gccgatactt cccatcgggc cgggccagca gctcggcgtg
    10201 gctgccctgc tcgac
//
LOCUS       DASWKS010000074         3746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1887252, whole genome shotgun sequence.
ACCESSION   DASWKS010000074 DASWKS010000000
VERSION     DASWKS010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887252"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VGA78_02560"
     CDS             complement(<1..581)
                     /locus_tag="VGA78_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892771.1"
                     /translation="MTTELDPYGRLGEKYRFLLQLPPGAPVRVSGRYWEPLAEDFLAS
                     GLQPVALTDSSVTQPGSILCAFVEAHGHEVHPRFGDRFPPRGKAVVLIRRRLVPAGWV
                     RNQVRRAAGRAGLAVRAEFLPVPNLDQVEAFLIRDRDPTEWRLGRSPRLPVSLRQPRE
                     HVFFLAPADGATGFSEAARLLSHATGDHDFSVER"
     gene            748..2190
                     /locus_tag="VGA78_02565"
     CDS             748..2190
                     /locus_tag="VGA78_02565"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX9892772.1"
                     /translation="MTSTAIRRPGLGAPRTAVGAGLMEGIYALRPRALWHFFSRQPLS
                     FWLVCLYMLFEYVRPQAIYRWLQPVPWSQILILAAPLAFLLEGGRLKAKNPINFWMVL
                     MSLAVGLSWAFALYPATSQEKMFVWVNWILVYVLIANIVSTEGRFFLFFLLFLLASFK
                     MSQFGARTWAARGFGFANWGATGAPGWFHNSGEFGIQMCIFFPLSMYFITGLQKHWSK
                     AKRLLLLALPGTAVLSVIATNSRGAMLGVAAVGMWMLLRTRYRVRALVALGALAVLVV
                     TVMPQETKERFTTMGEDETSQNRITFWRHGIETFQRYPLTGIGYENWAEYYRNYYGRV
                     ALPHNIFIQASAELGAFGIVSLLGLIVSSFVVTYRTRRLANVMGERGRFLAATARGLD
                     GAMIGYLASAFFVTVLYYPYLWFSLGMTSALHAAAVNEAAKGGGAPAPAPATTGGRPV
                     RAAGWRSAATALTTRRLRGGVELRRPRTVE"
     gene            2187..2972
                     /locus_tag="VGA78_02570"
     CDS             2187..2972
                     /locus_tag="VGA78_02570"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9892773.1"
                     /translation="MNDDTMLPPEQVRADYNKTLRDVRGEYVQFRWLNSPTQRRHYQQ
                     TKAALRWAAGTARAGSLLEVGCGPAVWTPLFLPSASAATLVDISDEMLRGARRVLAGR
                     NGVSFVRADFTETDLGSEQFDTAVSIRAFEYMPDKPRVLERFAHVLRPGGRLILVTKN
                     AGWRDHQRAQFAAKAPSPTDIPKEVRLQAGVVGWQALTEMARGAGLREVEVHPVVIGS
                     YEGLARSRPALLLFDLIHRTSYRGSMSGRLDAWTESVMLLATR"
     gene            complement(2983..>3746)
                     /locus_tag="VGA78_02575"
     CDS             complement(2983..>3746)
                     /locus_tag="VGA78_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892774.1"
                     /translation="LRHQVRVLDACPAVEAVFHDYIWFKSGSDPEQGGRYLLRERFLE
                     RAAVYLIPAPETGCPAFLASRDIIKFMSTEIVGMHTSALAIRAQALSRITPQPPFREE
                     LPHGEDIDLWLRIASQTSLAIINLPLSYYRHRDNSWMNSHSRRRLALGSYLVKSEMLD
                     RLERMLTPAEWPVFRDRIASYWQGLAYQSLVAGLYPEARRGFRESLRISRNTRVSLLA
                     LKGLGVSLLPRVVLRSYWRATGGGEFARRGTPPAT"
BASE COUNT          662 a         1203 c         1192 g          689 t
ORIGIN      
        1 cgctcgaccg agaagtcgtg gtccccggtg gcatggctca gcagcctggc cgcctcgctg
       61 aatcccgtgg ctccgtctgc tggagcgaga aaaaagacat gctcccgcgg ctgtctgagc
      121 gagaccggga gtcgcggaga acgccccaag cgccactcag tcggatcccg gtcccgaatc
      181 aggaacgctt cgacctggtc gagattcgga acgggaagaa actccgcccg caccgcgagc
      241 cccgcccgcc cggcggcccg tcgaacctgg tttctgaccc agccggcggg taccagtcgg
      301 cggcggatga ggaccaccgc cttgccccga ggtgggaagc ggtccccgaa ccgcggatgg
      361 acctcatgac cgtgagcctc cacgaacgcg caaagaatgg atcctggttg ggtaaccgag
      421 ctgtcggtga gagctaccgg ctggaggccg gaagcgagaa aatcctcggc cagcggttcc
      481 caataccgtc cactgacccg taccggggca cccggaggca gctggagaag aaaccggtac
      541 ttttcgccca gacgaccata cggatccaat tcagtcgtca tcctaatggg atggagggag
      601 aacgcagaga tcgttcgaag gcgccatccc cgccacagta gcgtggtaca tttcgggtat
      661 ggcgccaggc ccgcaggccc aagttaaccc gttccgacga catgagttgc ggttgtccag
      721 gcacatgact tgcactagga tctccggatg acttcgaccg cgatcagacg acccggcttg
      781 ggcgcccctc ggacggcggt aggcgccggg ctgatggagg gaatctacgc cctccggccg
      841 cgggccctgt ggcacttctt cagccgccag ccgctttcat tctggctggt atgtctctat
      901 atgctgttcg agtatgtccg cccccaagcg atctaccgct ggctccagcc cgtcccttgg
      961 tcccagattc tgattctcgc ggctccactc gccttccttc tcgagggcgg ccgactcaag
     1021 gcaaagaacc cgatcaattt ctggatggtt cttatgtccc tcgcggtcgg cttatcctgg
     1081 gcctttgcat tgtatcccgc cacatcacag gagaagatgt tcgtctgggt gaactggatt
     1141 ctggtctacg tactgatcgc gaacatcgtc tccaccgaag gccggttttt cctgttcttc
     1201 cttctcttcc ttctggccag cttcaagatg agccagttcg gcgcccgcac ctgggccgcc
     1261 agaggattcg gatttgcgaa ttggggagcg accggtgcgc cgggatggtt ccacaactcg
     1321 ggcgagttcg ggatccagat gtgcattttc ttcccgcttt cgatgtattt catcaccggt
     1381 ttgcagaagc attggagcaa ggccaaacgc ctgctgctgc tggcgcttcc cggcaccgcg
     1441 gtactgagcg tcatcgccac caactctcga ggggccatgc tgggggtggc cgccgtggga
     1501 atgtggatgc tgctccggac ccgctaccgg gtgcgtgctc tggtggcgct gggtgccctc
     1561 gcggtcctgg tggtgacggt gatgcctcag gagaccaagg aacgcttcac caccatgggt
     1621 gaggacgaga cctcacagaa ccggatcacc ttctggcgcc acggtatcga gaccttccag
     1681 cgctatcccc tgaccggcat cgggtacgag aactgggccg agtattaccg caactactat
     1741 gggcgggtcg ccctgcccca taacattttc atccaggcaa gcgcggagct gggagcgttc
     1801 gggattgtat ctctgctcgg tctcatcgtt tcgtcatttg tcgtgaccta tcgcacccgc
     1861 cgtctggcta acgtgatggg agaacgcggg cggtttctcg ccgcgacggc ccggggcctc
     1921 gacggcgcga tgatcgggta cctcgcctcg gcattctttg tcacggtgct gtactatccc
     1981 tacctctggt tcagtctggg gatgacctcg gctcttcacg cggccgcggt gaacgaagcg
     2041 gccaagggag gcggagcccc ggcaccggct cccgccacca cgggggggag gccggtgaga
     2101 gcggccggct ggagaagcgc ggccacggcc ctgaccaccc gccggctccg cggtggggtc
     2161 gagttgaggc gtccgcggac cgttgaatga acgatgacac catgctgcct cccgagcagg
     2221 tccgggccga ctacaacaag actctgcgcg acgttcgagg cgaatacgtc cagttccgct
     2281 ggctgaattc tcccacccaa cggcgtcact accaacagac aaaggcggcc ttgcgctggg
     2341 cggctggaac cgcccgggcg ggcagtctgc tggaggtcgg ctgcggtccg gcggtctgga
     2401 ccccgctctt cctcccatca gcatcggccg caaccctggt ggacatctcc gacgaaatgc
     2461 tgcgaggggc aaggcgggtt ctggcaggcc ggaatggagt ctcttttgtc cgagccgatt
     2521 tcacggagac cgatctcgga tcggagcagt tcgacaccgc cgtctcgatc cgggccttcg
     2581 agtacatgcc ggacaagccc agagtcctgg agcgtttcgc ccatgtgctt cgcccgggtg
     2641 gccgcctgat tctcgtcacc aagaatgccg ggtggcggga ccatcagcgc gcccagttcg
     2701 cggctaaggc gccgtccccc accgacattc cgaaagaagt gcgcctccag gctggtgtgg
     2761 ttggttggca agcgttaacc gagatggccc gaggggccgg cctgcgcgag gtagaggtgc
     2821 acccggtcgt catcggaagc tatgagggtc tagcccgaag ccgcccggca ctcttgctct
     2881 tcgacctgat ccaccgtacc agctaccggg gttcgatgag cggccggctc gatgcctgga
     2941 ccgagagcgt gatgctgctg gctacccgct gaaccggctg cgtcaggtgg caggaggagt
     3001 cccccgccgg gcgaattcgc caccacccgt ggcgcgccaa tagctccgca gcacgacccg
     3061 cggaagcaag gagactccca gacctttcag ggcgagcagt gagacccggg tgttccgact
     3121 gatgcggagg gattcccgga agccgcgtcg cgcctcggga tacaaaccgg cgaccagcga
     3181 ctgataggcc agtccctgcc agtaagacgc gatccgatcg cgaaacaccg gccactcggc
     3241 gggggtcagc atccgctcca gccggtccag catctcgctt ttgaccagat acgaccccag
     3301 ggcgagccgc cgccgcgaat gggaattcat ccagctgttg tcccggtgcc gatagtagct
     3361 gagcggcagg ttgatgatcg ccagcgaggt ctggctcgcg atccggagcc agagatcgat
     3421 gtcctccccg tggggaagct cttctctgaa gggcggctgc ggtgtgattc ggctcagcgc
     3481 ctgggcccgg atggcaaggg cgctggtgtg catcccgacg atctcagtag acatgaattt
     3541 gatgatatcg cgggacgcca ggaacgcggg acagccggtt tccggggccg gaatcaggta
     3601 gaccgcggcc cgctccagaa atcgctcgcg gagcaggtac cgccccccct gctcgggatc
     3661 actgccgctc ttgaaccaga tgtagtcatg aaataccgcc tccactgcgg ggcaggcatc
     3721 cagcacccgc acttgatggc gcagct
//
LOCUS       DASWKS010000075         1876 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_404153, whole genome shotgun sequence.
ACCESSION   DASWKS010000075 DASWKS010000000
VERSION     DASWKS010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404153"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..561)
                     /locus_tag="VGA78_02580"
     CDS             complement(130..561)
                     /locus_tag="VGA78_02580"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9892775.1"
                     /translation="MKLRVGDPWMSSKAYSHTLKSLSINLLVAQIEPALAFQREVLGA
                     GVVYSDPDFAVCSGFGTEWMLHADHTYDKHAMGRTIAPGTLRGGGVELRLHGCDPDQA
                     EAAARRLGHEVLVPTADKGHGMREVYLRDPDGYIWVPDVAI"
     gene            complement(589..>1876)
                     /locus_tag="VGA78_02585"
     CDS             complement(589..>1876)
                     /locus_tag="VGA78_02585"
                     /inference="COORDINATES: protein motif:HMM:NF022702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3048 C-terminal domain-containing protein"
                     /protein_id="HEX9892776.1"
                     /translation="AAAAVLFLVFLLAVNRPMEQTQPAEPTTGDSTRQPAARFGARSV
                     TLVVTPLPRNSTTVSTGTPPPPPVATVPAVGPAYRPGFNPLTGLPVSSIQTLLKVPLL
                     VSITEFPPSARPQSGLSAASQVWETSIGEGMTRFLAVYYGDYLEVLSDLLERHPELTT
                     SDPAIGPIRSGRVGYQEIKLFYPGALLVIRYGSPEVIEQLTNLRTVYADDPNDVNSAT
                     LTLAELEALELDAAQPSSYAGLSFDLRVPAGGVPAPTLELIYSLYNQIRWEYDADRET
                     YLRFQDQADGSGTLVPSFDRLSSDRLQADNVLVLFADHKYQNLQGTILSIELAYVPKR
                     YGLLFRDGRQFEVQWSSRGLEFRVQDDQGKAVPLRPGVTYFEVVSYESSWDPAARIVR
                     FHNPPLPTLTITPTPTLTFTPSATESPEPPTATETP"
BASE COUNT          342 a          567 c          622 g          345 t
ORIGIN      
        1 gcttcttgta gtacacaagc cagatctcat tcttcgactt gtgattgcgc ttcaacaagg
       61 cgcgccactc gctgcgggtc gcggcctgca gcaacttggc cttcgggatc ggctgtttca
      121 ccctcagcct cagatggcga catccgggac ccagatgtat ccatcgggat cgcgcaggta
      181 gacctcccgc atgccgtgac ccttgtcggc ggtgggaacc aggacttcgt gcccgagccg
      241 ccgggctgcg gcttccgcct ggtccgggtc acaaccgtgc aatcgcagct cgacgccgcc
      301 cccgcgcaga gttccgggcg cgatcgtccg acccatcgcg tgcttgtcgt aggtatggtc
      361 ggcatgcagc atccattcgg ttccgaagcc ggagcagacc gcgaagtcgg ggtcggaata
      421 gacgacgccc gccccaagca cctcgcgctg aaacgcgagg gcgggctcga tctgcgcgac
      481 gagcaggtta atagacaggg acttgagagt gtgggagtag gcctttgagg acatccaggg
      541 atcaccgacc cgcagcttca tcgttcctcg ctttctatct agcccaagct atggggtttc
      601 agtcgccgtc ggtggctcgg gtgactcggt cgccgagggc gtgaacgtta gggtaggcgt
      661 cggggtgatg gtcagggtcg gcagcggcgg gttgtgaaag cggacgatcc gggccgccgg
      721 gtcccaggag gattcgtagc tgaccacctc gaagtaggtg actccgggcc ggagcggaac
      781 agccttgcct tgatcgtcct gcacgcgaaa ctcgagccct cggctcgacc actggacttc
      841 gaactgccgg ccatctcgga acagcagccc gtatcgtttg ggcacatagg ccaattcgat
      901 gctcaagatc gtcccttgca ggttttgata cttatgatcg gcgaacagga ccaggacgtt
      961 gtcggcctgc agccggtcgc tgctcaaccg atcgaacgag ggtaccaggg tgccgcttcc
     1021 gtcggcttga tcttggaaac gaaggtaggt ctctcgatcc gcgtcatact cccaacggat
     1081 ctggttgtac aggctgtaga taagttcgag ggtcggtgcc ggcacacccc cggcgggcac
     1141 ccgtagatcg aaggacaacc cggcgtagct ggacggctgt gccgcatcga gttccagggc
     1201 ctctagctcg gccagagtca gcgtggcgct gttgacatcg ttcggatcgt cggcgtatac
     1261 cgttcgcaaa ttggtcaatt gctcgatcac ttccggagag ccgtagcgga tgaccagcaa
     1321 ggcgcccggg taaaacagct tgatctcctg atacccgacc ctccccgatc ggatcggtcc
     1381 gattgccgga tcactcgtcg tcagctcggg atggcgctcg agcaggtccg acaagacttc
     1441 caggtagtct ccgtaatata cggccaggaa ccgggtcatc ccctccccga tggaagtctc
     1501 ccagacctgc gaggccgctg agagcccgga ctgagggcgg gccgagggcg gaaactcggt
     1561 gatcgagacc agcaatggca ccttgagcag cgtctgaata ctggagaccg gcagcccggt
     1621 cagcgggttg aagccgggcc ggtaggcggg gcccaccgcg ggaaccgtgg ccactggggg
     1681 aggagggggc gttccggtcg aaacagtcgt cgaatttctc gggagcgggg ttacgaccag
     1741 ggtgactgac cgcgctccga agcgggcggc cggctgacgg gtcgagtcgc cggtggtcgg
     1801 ctccgccggc tgggtttgtt ccatcggtcg gttcacggcg agcaggaaaa ccagaaacag
     1861 cacggcagcc gccgcg
//
LOCUS       DASWKS010000076        10742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_32436, whole genome shotgun sequence.
ACCESSION   DASWKS010000076 DASWKS010000000
VERSION     DASWKS010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10742
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32436"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1924)
                     /locus_tag="VGA78_02590"
     CDS             complement(26..1924)
                     /locus_tag="VGA78_02590"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX9892777.1"
                     /translation="MTPEPFDPREELVVAPPLPAVPEVDGLLAIRVVYPPAGTLIGPI
                     DSSFVFGSAGSGRASMTLNGDPVRVWANGTWLAWVKLPAGPEVRLDIVAWRGADSARV
                     NHMIRRRVEPEPSRAGGVWVDTTSFSPRGRIWWSTGEPILLVVRAVEGASIRLLLPDR
                     PAPIELAPLPARSGISDALRAFDRDTTNLLTSNRRDSYVGVLSSDAIGPPLGPVTNPA
                     NGPLAGEAILEVARNGDTLRVQWPIQVTRLEEPLPVVELDDDPRQQNNTDRITVGRAL
                     PGGTYHWFFPTGTRAVVTGRINADLRLRLSSGHSAWINAAEATLLPPGVGLEPAVLGS
                     ITATPANDRVSLRLPLSWRAPYRVEEHPDGVTLSFHTAVGDPNWIRHGPRRGPLASVT
                     WRQRAADIVDVTATLRSSLWGYRTRWDRDDLILELRTRPAPVGRRPLRGRLIVVDPGH
                     PPQGATGPSGLTEAEANLGVALVLERLLAQDGARVVMTRRDDRPVELWPRVKLADSLD
                     ADILVSIHNNALPDGLNPFTNNGSSVFYFHPRSIPLARAIQRELTRRLPLRELGIARG
                     DLALVRGTWMPSVLVEGMFMLIPEQEAALRTEAGRRAYAEAVRAGIRAFFAGEADVML
                     HQSGTSPN"
     gene            2070..3635
                     /locus_tag="VGA78_02595"
     CDS             2070..3635
                     /locus_tag="VGA78_02595"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9892778.1"
                     /translation="MTASSPDQLAPGAILAERYEIIRRLGAGGMGAVYLARHRLMDRL
                     CALKVLPPGHHRDAEALERFTREARNASRIVHPNVCTVYDFGTTVEGVAYLAMEYLEG
                     RTLGAILAEHGRLPLDRTVRLTREIAAGLDGAHELGIVHRDLKPDNVMVLASRAGETV
                     KLVDFGIAKALEAEPSREMTAPGVVIGTPDYMSPEQFAGDPVDPRTDVYALGVMFYRM
                     VTGSLPHLGESARETLTKRLTEPPRSLGDVAPDLVVPAGLHSIVEKVLARRPAERYPT
                     AGAFSDAVVSLLTGPLDISSLPTVRLDAATSPMPIATTRPRRNVAFSAAGLLGLAVVA
                     ALLLLQQGGDAGLTPATNDLVVNPPSALGPPPPAPQPSAAPTESTRSQQATLPPATSQ
                     RVRESTLARPVTPPPAPATPPPAPVAPPTERDLPDLNEIFNPATRDAARRKAEQIYAH
                     EGASFAVRAQAALVVATVHNEAQQYELARRWATSAQAMNSQDEPGDRRDSRAERIRRL
                     LATLPQSPDTTGS"
     gene            3632..4645
                     /locus_tag="VGA78_02600"
     CDS             3632..4645
                     /locus_tag="VGA78_02600"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX9892779.1"
                     /translation="MTDKAVTALIYAKTDLGRTRDHNEDAFLVADLSAGRSTLHSEVA
                     RYSIGERGLLVLVADGMGGAAAGELASAMAADLIFGHLVGTWTKEDELTPDRFTLRLR
                     EAVELANLQIHTYAREHPEVRGMGTTATVAGILGDHLYLAQVGDSRAYLVRHGNAVQI
                     TKDQSLTQRLVDAGEITEEEAEASSRRNIILQALGPDPRIRVELTHEQISRGDTLVLC
                     SDGLSGQVKRDEIAQYVGRQSDLETLGSELITLANTRGGPDNITVVVARFDGPGLPEP
                     EVDPSYVVLDTDEGAGPQTPTETPAAAPPPVRTERTGSPAGMALLVIGVLIVLLAIFL
                     AVI"
     gene            4686..6116
                     /locus_tag="VGA78_02605"
     CDS             4686..6116
                     /locus_tag="VGA78_02605"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX9892780.1"
                     /translation="MLSGARAGTRYPLSAGFATLGRHPTSELPFDPEKDAEVSTRHAA
                     VFRQGPGYVVRDLGSTNGTWVNGARVRGDQALEPGDRIRLGTRGPEVEFVVEEVEERP
                     GGLQAETAGVAPVLTPTPAAPPSAARRPVIGQEQSTTDLKIRVEVARQTDRLRRRLLG
                     IVLLAIAGMAMLVGWLSWSAYQARLGLARERERLIARVDSVDAVLINAAERASGLRQA
                     LDSARREADALRRTIAELGTSEEAIESLDSQVLQAIQRHDPLLRAARFDATAIAAANA
                     RATVMVFVDKGEGQRVSATGFVVRTKADTGWIVTSRHVLQGGSGPEPERIAVAFSGGK
                     VAWRARLVETHRSADLAVIRVLAWGHVFPVRAVNLEATPQAGEPIAILGFPHGLDTQG
                     GDWRTQGLRVSATTGTVSSMAPDRIQIDGYGAPGASGSPVFNATGQVVGVLSGGQPES
                     GGRMIYAVPASALKVWGAMVRAGSGE"
     gene            complement(6823..8460)
                     /locus_tag="VGA78_02610"
     CDS             complement(6823..8460)
                     /locus_tag="VGA78_02610"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HEX9892781.1"
                     /translation="MSGLDWAVVILYLVGTLVAGLYVARRGAKNLAEFFVGGRAIPWW
                     LAATSMAATTFNIDTPLYVAGRVARAGIAGNWEWWCFAIGHVLMAVLLAKLWRRASVL
                     TDMELTELRYSGRPAAVLRATRAFLLAVPFNCISIGYGMLAMRKVMMALGLLEGLPDL
                     PGDPRLWAVLPIVGVVLVYTAVSGLWGVVATDFIQYFLAMAGAFLVMAFALGEVGGLG
                     PMVDSIRSSGRQSHLDLVPLGPDALVPLSTFLGYIGIQWWAFRNSDGGGMFVQRLSAT
                     ATEAEAERAAHTFNLLNYVVRTWPWVLVALTAMVLLPNLDDPELAYPLMMRRYLPSGL
                     LGLTVASMMAAFMSTVSTQVNWGASYVVHDMYGRFRGVTDERRLMLAARVASVLITAV
                     AATVSFFMSDVGKVFQFLILIGNGPGLVLLLRWFWWRVNAWAELCAMLAGLVLALLTY
                     LPALAGLTFGQRLLLTAFGSMAIWVPAMFLTPPEPAETLDRFYARVRPGGAWGPVRAR
                     TQLTPLDNLKRDLLRWVGWVTLILGGTLAIGWVLVGR"
     gene            complement(8457..9890)
                     /locus_tag="VGA78_02615"
     CDS             complement(8457..9890)
                     /locus_tag="VGA78_02615"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX9892782.1"
                     /translation="MHNAGLRVARVLFPTLRWREAGDFGHEEARIVEALRLGVGGFLL
                     FGGTVDSVAALTSRLRNEAGRPLLIASDLERGAGQQVRGLAELPPPAALAAIGEQAVI
                     RGAGLLTGTEALRVGINWVLAPVADLDLEPDNPIVQTRSFGSDPLAVSESVASWIAGC
                     QATGALACAKHFPGHGRTRVDSHDALPVVSAGRDELSHTDLVPFRAAIEARVDSVMTS
                     HIAFPALDPSGAPATFSPVILGLLRESLGFHGIIASDALTMAGASTGRSPGSLALEAV
                     RAGVDVLLDAPEIDSMAAALEAEAGVDPELQSRLDESIRRVEHAAGLAPANAGDFIPT
                     SSSAVALGDWLLSLPAAREPVGPLRTPLELVVVDDDLGGKYPPSSPSNLVEQQLRGAG
                     ISLGPGGSRVVLAFAEPRASKGRAGFSDASLATLRAAAPHSAAIVLFGHPRLIAQMPH
                     GPPVLLAWHRQGLMQAAAARWLRERVE"
     gene            complement(9872..>10742)
                     /locus_tag="VGA78_02620"
     CDS             complement(9872..>10742)
                     /locus_tag="VGA78_02620"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX9892783.1"
                     /translation="VLDAGRVLPSDLDFIAFHGQTIWHEPPSVTWQLGEPALLAERFG
                     TRIVSGFRARDLAAGGEGAPLVPVADVLLFGAPDGGRILLNIGGMANLTYVPQLAVDD
                     GAFAFDTGPGVALIDAVARLVDPSRPFDQDGTLAARGRVDQVLLSRLLSDDYFKAPPP
                     KSTGRERFGADYARRLLDGRDGPAAAATAVELTVRSIAEALQRWTPAGVEVVASGGGC
                     HHPVLWASLERLLSAEGRRLRRFDDVFFPGDAKEAVAFALLGYLTIHGQPGNLPAATG
                     AAGPRVLGCITPA"
BASE COUNT         1887 a         3707 c         3629 g         1519 t
ORIGIN      
        1 gccaggaaaa gccactgcga ccgcatcagt ttggagacgt accagactgg tgcagcatca
       61 catccgcctc acccgcgaaa aacgcccgga ttccggcccg aactgcctcg gcataggccc
      121 gcctgccggc ctcggtacga agggcggcct cctgctcggg aatgagcatg aacattccct
      181 caaccaggac cgaaggcatc caggtgcccc ggaccagcgc caggtccccc cgggcaatcc
      241 ccagctcccg caacggcagg cgccgggtca gctcccgctg gatcgcccgc gccagcggga
      301 tgctgcgggg gtgaaagtag aagacgctgc tcccgttgtt ggtgaacggg ttcaagccat
      361 cgggcagcgc gttgttgtgg atcgaaacca ggatatcagc gtcgagactg tcggcgagtt
      421 tgactctggg ccagagttca accggccggt catcgcgccg ggtcattact acccgggctc
      481 cgtcctgagc cagcagccgc tccagcacca acgccacacc cagattggct tctgcctcgg
      541 tcagtccgct ggggccggtc gcgccctggg gtggatgccc cgggtccacc acgatcagtc
      601 tgccccgcag cggccggcga ccaaccggag ccggccgggt ccgcagctcc agaatgagat
      661 cgtcccggtc ccagcgggtc cgataacccc acagggagct ccgcagtgtg gcagtaacgt
      721 ccacgatgtc cgcggcgcgc tgcctccagg tgacactcgc cagtggaccg cgccgggggc
      781 catgacggat ccagttcgga tctcccacgg cggtgtggaa cgagagggta acgccgtcgg
      841 gatgctcttc cacccgatac ggcgcgcgcc acgaaagcgg cagacggagt gagacgcggt
      901 cgttagccgg ggtcgctgtg atcgacccca gcaccgcggg ctccaacccc accccggggg
      961 gcaacagcgt ggcctcggcc gcattgatcc aggcggagtg cccggaagag agtcggagcc
     1021 gcaggtcggc attgatgcgg ccggtgacga ccgcacgagt tccggttgga aagaaccagt
     1081 gataggtacc gccgggaagc gctcgaccca ccgtgatccg gtcggtgttg ttttgctgcc
     1141 gtggatcatc gtccagctcc acgaccggga gcggctcctc gagccgggtg acctggatcg
     1201 gccattgcac ccggagggtg tcgccgttcc tcgcgacctc caggatggcc tcacccgcca
     1261 gcggtccgtt ggccgggttg gttaccggcc ccagcggtgg tccaatggcg tcactggaaa
     1321 gcactccgac atacgaatcg cgccgattgg aggtcagcag attggtggtg tcgcggtcga
     1381 aggcccgaag cgcgtcggaa atcccgcttc gtgccgggag cggcgccagc tcgatgggag
     1441 cgggccgatc ggggagcaag aggcggattg atgcaccctc caccgcccgc acgacgagga
     1501 gaatcggttc ccccgtgctc caccagattc ggcctcgggg agaaaagctc gtggtgtcga
     1561 cccacacgcc gccggcgcga cttggctccg gctcaacccg gcgccggatc atatggttca
     1621 ctcgggccga atcggcgcct cgccaggcca cgatgtccaa ccgcacttcg ggcccggccg
     1681 ggagcttgac ccaggcgagc caggtcccgt tggcccagac ccgaaccggg tcaccgttga
     1741 gcgtcatcga ggcccgcccg ctgccggcac tgccgaatac gaagctcgaa tcgatcgggc
     1801 cgatcagggt gccggcggga ggatacacca cccggatggc caggagtccg tcgacctcgg
     1861 gcacggcggg taacggtggt gcaaccacca actcctcccg gggatcgaac ggttccgggg
     1921 tcatggttgg gggggccgaa gagccaaaag cgcaggcgga ggcaagggcc aggaacacga
     1981 ggggcggccg gtgcaacatg cgcagaaggt aacatacgac cgggcttcgc gttgacgctt
     2041 cccaaggcct acccgtacaa ttcgctgcaa tgaccgcctc ctcgcccgac cagctggcac
     2101 cgggcgccat actcgccgag cgctatgaaa tcatccgacg gctcggggcc ggcggcatgg
     2161 gggcagtcta cctcgcccga catcggttga tggataggct ctgcgccctg aaggtgctcc
     2221 ctcccggtca tcaccgggat gcggaagccc tggagcggtt cacccgggag gcccgcaacg
     2281 ccagccgcat cgtgcatccg aatgtctgca ccgtgtacga cttcggcacg acggtcgagg
     2341 gggtcgccta cttggcgatg gagtacctgg aaggccgcac cctcggtgcc atcctggccg
     2401 aacacggccg actgccgctg gaccggacgg tgcgattgac gcgggagatt gccgcgggcc
     2461 tggatggagc gcacgagctg ggcatcgtgc atcgcgatct caagccggac aacgtgatgg
     2521 tgctggcatc gcgggccggc gagaccgtga agctggtgga cttcggaatc gccaaggcgc
     2581 tggaggccga gcccagccgg gagatgaccg cgccgggcgt ggtgatcgga actccggact
     2641 acatgtcgcc ggagcagttt gccggtgatc cggtggatcc ccgtaccgac gtatatgcgt
     2701 tgggcgtgat gttctaccgg atggtcaccg ggtcgctgcc ccacctgggc gaaagcgcgc
     2761 gcgagaccct gaccaagcgg ttgaccgaac cgccccggtc tctgggcgac gtggccccgg
     2821 acctggtggt gccggcgggc ttgcattcca tcgtggagaa ggtgctggcg cggcgtcccg
     2881 cggagcggta cccgaccgct ggagcctttt cggacgcggt cgtgtctctg ctcaccggtc
     2941 cgctggacat cagctcgctg cccacggtgc gtctggacgc cgcgacgtcg cccatgccca
     3001 ttgccaccac gcggccccgg cgcaacgtgg cgttcagcgc ggcggggttg ttgggcctgg
     3061 cggtggtggc cgcgctgcta ctgctgcagc agggagggga tgccggactc accccggcca
     3121 ccaatgacct ggtggtgaac ccaccctccg cgttggggcc gcccccgccc gctccgcaac
     3181 caagcgctgc gcccaccgag tcgacccggt cccagcaggc cacgctcccc ccggcgacgt
     3241 cgcagcgggt tcgtgagtcg accctcgcgc ggcccgtcac cccaccgccg gccccggcca
     3301 cgcccccacc ggcaccggtt gcgccgccga ccgagcggga cctgccggat ctgaacgaaa
     3361 tcttcaatcc ggcgacccgg gatgcggcga gacgcaaggc agagcagatt tatgcccacg
     3421 aaggtgcgag tttcgcggtc agggcgcagg cggccctggt cgtggcaacg gtgcacaacg
     3481 aagctcagca atacgagctg gcgcgcaggt gggccacatc ggcccaggcg atgaactcgc
     3541 aggacgagcc cggggatcga cgtgattcac gagccgaaag gatacgacgt ctgctcgcca
     3601 ccctacccca atcaccggac accaccggat cgtgactgac aaagccgtca ccgcgttgat
     3661 ctacgccaag accgacctcg ggcgcacccg cgaccacaat gaggacgcgt tcctcgtggc
     3721 cgacctgagc gccggacgtt cgactctgca ctccgaggtc gcgcggtaca gcatcggcga
     3781 acgaggattg ctggtactgg tggccgatgg catgggtggc gccgcggccg gcgagctggc
     3841 gagcgccatg gccgccgatc tcatcttcgg ccatctggtg ggcacctgga ccaaggaaga
     3901 cgagctcacg cccgaccgct ttaccctgcg gcttcgcgag gcggtcgagc tggccaacct
     3961 gcagattcac acctacgccc gcgagcatcc cgaggtccgc ggcatgggga ccacggccac
     4021 cgtggccggc atcctgggtg atcatctcta cctggcccag gtgggtgaca gccgcgccta
     4081 tctagtgaga cacggcaatg cagtgcagat caccaaggat caatctctca cccaacggct
     4141 ggtggacgcc ggtgagatca ccgaggaaga ggcggaggcc agcagccgga ggaacatcat
     4201 cctccaggcg ctcggccccg acccgcggat ccgggtcgag ctgactcacg agcagatctc
     4261 tcgcggggat accctggtcc tctgctccga tgggctgtcg gggcaggtga agcgggatga
     4321 gatcgcccag tacgtcgggc ggcagagcga cctcgagacg ctgggcagcg agctgatcac
     4381 gctggccaac acccggggcg gtcccgacaa catcacggtg gtggtggcgc ggttcgacgg
     4441 acccggtttg cccgaacccg aggtggatcc gagctacgtg gtgctcgaca ccgatgaggg
     4501 cgccgggcca cagacaccga ctgaaacacc cgcggcggcg cccccgccgg tccggaccga
     4561 gcgcaccgga tccccggccg gcatggcgtt gctggtgatt ggggtactca ttgtcctcct
     4621 cgcaatcttc ctcgcggtca tctgacccgc ggcggatcaa gcggtccacc ggcgcggtgc
     4681 tccatgtgct gagcggcgcg cgggccggta ctcgttatcc gctcagcgcc ggctttgcca
     4741 ccctgggacg ccatcccacc tccgagctgc cgttcgaccc cgagaaggac gccgaggtct
     4801 ccacccggca cgcggcggtg tttcgccagg gacctggata cgtggtgcgc gacctcggca
     4861 gtaccaacgg aacctgggtg aatggggccc gggtccgggg cgatcaggcg ctcgagccgg
     4921 gtgaccggat ccggctgggc acgcgcggtc ccgaggtgga gtttgtggtg gaggaagtag
     4981 aggagcgccc cggtggcctt caggccgaga cggccggggt ggcacccgtg ctcaccccga
     5041 cccccgcggc gccgccctcc gccgctcgac ggccggtgat cggccaggaa cagtccacca
     5101 ccgatctcaa gatccgggtg gaagtggccc gccagaccga ccggctccgc cgccggttac
     5161 tgggaatcgt gctgctggcg atcgcgggca tggcgatgtt ggtgggttgg ctctcctggt
     5221 cggcctacca ggcgcggctg gggctggcgc gggaacggga gcggctgatc gcccgggtgg
     5281 acagtgtgga cgcggtgctg atcaacgcgg ccgagcgcgc ctcgggactg cggcaggcac
     5341 tggacagcgc ccggcgcgag gccgacgccc tgcgccgcac catcgcagag ctgggtacca
     5401 gcgaggaagc gatcgaatcg ctcgattccc aggtgctgca ggcgatccag cggcacgatc
     5461 cgctgctccg cgccgcccgt ttcgacgcca ctgccatcgc ggccgccaac gccagggcca
     5521 cggtgatggt gttcgtggac aaaggcgagg gccagcgggt gagcgccacc ggcttcgtgg
     5581 tgcggaccaa agccgacacc ggatggatcg tcacttcacg ccatgtgctg cagggcgggt
     5641 cggggccgga accggagcgg atcgcggtcg ccttcagcgg aggcaaggtg gcctggcgag
     5701 cccggctggt cgagacccat cggtcggcgg atctggcggt gatccgggtg ctggcctggg
     5761 gtcacgtgtt cccggtgcgt gctgtcaatc tcgaggcgac accccaggcg ggcgaaccga
     5821 tcgcgatcct cggtttcccc cacggactcg acacccaggg gggagattgg cgaacccagg
     5881 ggctcagggt ctccgccacg acgggcacgg tgtcctcgat ggcacccgac cggatccaga
     5941 tcgacggcta tggagcgccc ggtgccagtg gcagcccggt gttcaacgcg accggccagg
     6001 tggtcggggt gctctccggt ggacagcccg aaagcggtgg gcggatgatc tacgcggtcc
     6061 cggcgtcggc cttgaaagtg tggggggcga tggtcagagc agggagcggg gagtaggaaa
     6121 caggaagcag ggagcaggga gtagggagca gggagcaggg actagggagc aggggggccg
     6181 agtctttcga gcgagctcag gagctttcgc tcgcggcgaa tcagtcccag gagcacgcgg
     6241 cagcactcgc gacaagtagc attagtcggt tccgcggcac tttcgcccag ttcaaccaac
     6301 cgctcgagaa cgtcggctga ctccaggcag gatccatatg cgatacggta gtgccggatc
     6361 ttttgccggg gctccttgag cccatagccc tccgtgatgt tgagttggac cgagagtgac
     6421 gagcgtttca gctggccgta catagccgag aacgagggcc gccaacggca ttcgcaaagg
     6481 gtcacgacct ctttgacgac ccgtttggcc agtcgccaag cgatgagatt ggtatgatca
     6541 cgcatcgaac caatctcggt cgattcctgg gaagacgccc caccgcaacc cttcgacttg
     6601 gggttcaaaa accgcgagcg ggccactaac gaagccaaca aaccgtcgcc cattcccaga
     6661 tccctgctgc ctgctgcctg ctccctgctc cctgcttcct gcttcctgct ccctgctccc
     6721 tactcctgct ccctgctccc tgctccctgc ttcctactcc ctgctccctg ctccctgctc
     6781 cctgctccct gcttcctgct tcctactccc tgctccctgg tttcagcgcc ccacgagaac
     6841 ccatccgatg gcaagggtcc cacccagaat cagcgtcacc cagccgaccc agcgcagcag
     6901 atcccgtttc agattgtcga gcggagtgag ctgggtacgg gcccgcaccg ggccccaggc
     6961 gcccccgggg cgcacccggg catagaaccg gtcgagggtc tcggccggct ccggcggagt
     7021 gagaaacatg gcgggcaccc agatcgccat cgacccgaat gcggtcagca gcagccgctg
     7081 gccgaaggtg aggccggcca gggccggcag ataggtcagc agggccagca ccagacccgc
     7141 gagcatggcg cagagctcgg cccaggcgtt cacccgccac cagaaccagc gcagcaacag
     7201 caccaggccg ggaccgttcc cgatcagaat caggaactgg aagactttgc cgacgtcgct
     7261 catgaagaac gacaccgtgg ccgccacggc cgtgatcagc acgctcgcca cccgcgccgc
     7321 gagcatcagg cggcgctcgt cggtgacccc tcgaaagcgc ccatacatgt cgtggaccac
     7381 ataactcgcg ccccagttca cctgggtcga gacggtggac atgaaggcgg ccatcatgct
     7441 ggcgaccgtc aggcccaaca gaccggacgg gagatagcgg cgcatcatga gcgggtaggc
     7501 cagctccgga tcgtccaggt tgggcagcag caccatcgcc gtcagcgcca ccagaaccca
     7561 gggccaggta cgcaccacgt agttcagcag attgaacgta tgggcagcgc gctcggcttc
     7621 cgcctccgtg gccgttgcgg agagccgctg cacgaacatc ccacccccat cggaattgcg
     7681 gaacgcccac cattgaatgc cgatgtaacc caggaacgtc gagagcggaa ccagcgcgtc
     7741 aggaccgagc ggcaccagat ccagatggga ttgacggccg ctgctgcgga tggagtccac
     7801 catgggcccc agacccccga cctcgcccag cgcgaacgcc atcaccagga atgcaccggc
     7861 catagccagg aaatactgga tgaagtcggt cgccaccacg ccccagagtc ccgagaccgc
     7921 ggtgtacacc aggaccacgc ccacgatcgg cagcaccgcc cagagccggg gatcaccggg
     7981 gagatcgggc agcccttcca acaggccgag cgccatcatc accttccgca tggcgagcat
     8041 gccgtacccg atgctgatgc aattgaacgg caccgccagc agaaaggcgc gcgtggcccg
     8101 cagcacggca gccggtcgtc ccgaataccg gagctcggtg agctccatgt cggtgagcac
     8161 gctggcccgg cgccacagct tggcgagcag caccgccatc aagacgtggc cgatggcaaa
     8221 gcaccaccat tcccagttgc cggcgatccc ggcccgagcc acccggcccg ccacgtacaa
     8281 cggcgtgtcg atgttgaagg tggtagcggc catcgacgtc gccgccagcc accaggggat
     8341 ggcgcgcccg cccacgaaaa actcggccag gttcttggcc ccgcggcggg ccacgtagag
     8401 gccggcgacc agcgtgccga ccagatagag aatgacgacc gcccagtcga ggccgctcac
     8461 tcgacccgct cgcggagcca gcgcgccgcc gccgcctgca tcaggccctg ccggtgccag
     8521 gcgagcaaca ccggagggcc gtgcggcatc tgcgcgatga gccggggatg tccgaagagc
     8581 acgatcgccg cgctgtgggg cgcggcggca cgaagggtgg ccagactcgc atcactgaag
     8641 ccggcccgtc ccttggaggc gcggggctcc gcgaaggcga ggaccacgcg actgcctccc
     8701 ggcccgaggg agatacccgc gccgcgcagc tgctgctcga ccaggttgga gggcgaggac
     8761 ggcggatact tgccgcccag atcgtcatcc accaccacca gctccaacgg cgtccgcaac
     8821 ggccccaccg gctcgcgcgc cgctggcagc gacagcagcc aatcgcccag cgcgacggcg
     8881 gaactggagg tcgggatgaa atcgcccgcg ttggccggcg cgagaccggc cgcgtgctcg
     8941 acccggcgaa tcgactcatc cagccgcgac tggagctccg ggtcaacccc ggcctcggct
     9001 tcgagcgccg cggccatcga atcgatctcg ggcgcatcga gcagcacatc caccccggcc
     9061 cggaccgcct ccagcgccag actgccggga ctccgcccgg tgctggcgcc ggccatggtc
     9121 agcgcgtcgg atgcaatgat gccgtgaaag ccgagcgact cccgcagcag gcccagaatg
     9181 acgggggaaa aagtggccgg tgcacccgag gggtcgagcg ccggaaaggc gatgtgcgag
     9241 gtcatcacgc tgtcgactcg cgcctcgatc gcggcccgga agggaaccag gtcggtgtgc
     9301 gacagctcgt cccgaccggc tgagaccacc ggcagggcat catgtgaatc cacccgggtt
     9361 cggccgtgac cgggaaagtg cttggcgcag gccaatgcac cggtcgcctg acagccggca
     9421 atccacgacg caacggactc gctcaccgcc agcggatcgg acccgaagga acgggtctgg
     9481 acgatgggat tgtccggctc gaggtcgaga tcggccaccg gcgccaggac ccagttgatc
     9541 ccgacccgca gcgcctcggt tccggtgagc agaccggcgc cacgaatcac cgcctgctcc
     9601 ccgatcgccg ccagcgccgc ggggggcggc agctcggcca gacctctcac ctgctgcccg
     9661 gcgccccgct ccaggtcgga cgcgatcagc agcggccgcc ccgcctcgtt tcggagtcgg
     9721 gaggtgagcg cggcgaccga gtcgaccgtg ccaccgaaaa gcaggaaacc gccgacgccc
     9781 agtcgcagcg cctcgacgat ccgcgcctcc tcatgtccga agtcgccggc ttcccgccag
     9841 cggagggtgg gaaagaggac ccgggcgacc ctcaggccgg cgttatgcat cccagcactc
     9901 gagggcctgc ggctcccgtg gctgcgggga gattgcctgg ctggccgtga atcgtgagat
     9961 agccgagcag ggcgaacgcg accgcttcct tggcgtcacc gggaaagaag acgtcgtcga
    10021 agcggcgcag cctgcggccc tcggccgaaa gcaggcgctc gagggaggcc caaagcaccg
    10081 ggtgatggca gccgcctccc gacgcgacga cttcaacccc ggccggcgtc cagcgctgca
    10141 gggcctcggc gatgctccgg accgtgagct cgaccgcggt ggctgccgcg gccggaccgt
    10201 cccgaccatc gaggaggcgc cgggcgtagt cggcgccgaa tcgttctcgg ccggtgctct
    10261 tgggcggcgg ggctttgaag taatcatccg acaggagccg ggacagcaat acctggtcga
    10321 ctcgccctct ggccgccagg gttccatcct gatcgaacgg gcgagatggg tcgaccagcc
    10381 gggccacggc gtcgatcagc gcgactcccg gtccggtatc gaaggcaaac gcaccgtcgt
    10441 caaccgccag ttgtggcacg taggtcaggt tcgccatccc accgatgttg agcaggatcc
    10501 gacccccgtc cggcgccccg aagagcagga cgtccgcaac cggcaccagc ggtgcaccct
    10561 ccccccctgc cgcgagatcc cgggccctga acccgctcac gatccgggta ccaaatcgct
    10621 cggccagcag ggccggctct cccagctgcc aggtgacgct gggcggttca tgccagatgg
    10681 tctgaccgtg aaaggcgatg aagtcgagat cggacggaag cacccgcccg gcatcgagca
    10741 cg
//
LOCUS       DASWKS010000077         2081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_777254, whole genome shotgun sequence.
ACCESSION   DASWKS010000077 DASWKS010000000
VERSION     DASWKS010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_777254"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..>2081)
                     /locus_tag="VGA78_02625"
     CDS             complement(167..>2081)
                     /locus_tag="VGA78_02625"
                     /inference="COORDINATES: protein motif:HMM:NF013613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9892784.1"
                     /translation="TGGGSVSRTSAITDNTGSVSVIWTLGGFLGAQTLTVSAGSLPPA
                     VVGATGTVGPPALLLPVAGNTQFAVVGRPVPIKPRVRLTDAFGNPIAGRSITFTVTTG
                     GGTITDSVQTTNASGEVELGSWTLGPGAGNNRLRAFLESINTELLAIGTPASVVVFQG
                     NSQTVNAGTQVPVKPAVLALGPDGEALADVAIVFQVDAGGGQITGPSQTTDAQGIARL
                     GNWILGTTAGENRVSATTFGLAAVSFTATGIAANPAVVTAATPTSITGLVGNFLSSNP
                     AVRVTDGSGNPVAAVPVTFEVVTGGGVVASAGFEAAFGLLAAAGATTDFDGRAQLGAW
                     RLGSTPGDQSVRVNVGSLPPMTFTATAEPVPVGTYQIEVRFTGTQPSAAQQNAFTSAA
                     ARWQELVLNDLPDETFNEPATSCSPELNEVIDDLVIFAELTTIDGLGGVLGSAGPCWI
                     RDETGLTVVGRMRFDTADLASLETSGHLGEVILHEMGHVVGFGTLWSLLGLIEGAGGG
                     DPTFVGSSSRSAWVAASQSLGFVGNIVPVENSGGPGTRDGHWRETVARNELMTGFINN
                     GTNPLSAFSVASFRDMGYVVNDAASDQFILTQLLLGTPAAQLQIREAPLAGPIYVIDR
                     AGRRAGTRSRIPF"
BASE COUNT          346 a          699 c          696 g          340 t
ORIGIN      
        1 aggagcgatc agtcagggca ttatccgcag atgccgccga tgccgccgat cgttcacaac
       61 gggcgtgaac tccagctgaa tggctgccag gttgggcgat caacccggcc atcgcgtcat
      121 ccgtggcatc ggcggctgag cgttcctgac gactgggtgc tgacggctag aacgggattc
      181 gcgaccgggt gccggcccgg cggccggcgc gatcgatcac gtagatcggt ccggccaggg
      241 gcgcttcccg gatctgcagc tgagccgcgg gagtgcccag cagcagttgg gtcaggatga
      301 actggtccga cgcggcgtcg ttcacgacat accccatatc acggaacgac gcgaccgaga
      361 aggcgctgag ggggttcgtc ccgttgttga tgaagccggt catcagctca ttgcgagcca
      421 cggtctcgcg ccagtggccg tcgcgggtgc cgggcccgcc ggagttttca accggcacga
      481 tgttcccgac gaatcccagc gactgcgacg ccgccaccca ggccgaccgt gacgatgagc
      541 ccacgaacgt gggatcaccc ccgccggcgc cttcgatcag acccagcagg gaccacaggg
      601 taccgaagcc gaccacgtgc cccatctcat gcaggatcac ttcccccagg tggccgctgg
      661 tctcgaggct cgccaggtcg gccgtgtcga agcgcatacg gccgaccacg gtgagcccgg
      721 tttcatcgcg gatccagcac ggcccggccg atcccagcac cccacccaga ccatcgattg
      781 tggtcagctc cgcgaagatg accagatcgt cgatgacttc gttcagctcc ggagaacagg
      841 aggtggccgg ctcattgaag gtctcgtccg ggaggtcgtt cagcaccagc tcctgccacc
      901 gtgcggctgc gctggtgaac gcattctgct gcgccgccga cggttgtgtt ccagtgaacc
      961 ggacttcgat ctggtacgtt cccaccggga ccggttcggc cgtggcagtg aatgtcatcg
     1021 gcgggaggct gcccacgttt acgcgtaccg actggtcgcc tggcgtacta cccagtctcc
     1081 aggcaccaag ctgagcccgg ccgtcaaagt cggtggtggc cccggcggcg gccagcaggc
     1141 caaacgccgc ctcgaagccg gctgaagcga ccacgccgcc tccggtgacg acttcaaagg
     1201 tgacgggaac cgccgccacc gggttcccgg acccgtcggt cacccggacc gccggattgc
     1261 tgctgaggaa attccccacc agcccggtga tgctggtcgg cgtggcagcc gtcaccaccg
     1321 cggggttcgc ggcgatcccg gtggcggtga aggagacggc cgccagcccg aaggtcgtgg
     1381 cggagacccg gttctcgccg gcggtcgttc cgagtatcca gttgccgagc cgggcaatgc
     1441 cctgcgcatc ggtggtctgc gatgggccag tgatctggcc gccgccggcg tcgacctgaa
     1501 acacgatcgc gacatccgcg agtgcctcgc cgtcgggccc cagcgcgagg accgccggtt
     1561 ttacgggcac ctgggtaccg gcatttacgg tttggctgtt cccctggaac accaccacgc
     1621 tggcgggagt tccgatcgca agtagttcgg tattgatgct ctccaggaag gcccgcagcc
     1681 ggttgttgcc ggcacccgga ccaagggtcc agctgccgag ctctacctca ccgctcgcat
     1741 tggtggtctg aaccgagtcg gtgatggtcc cgccaccggt tgtgaccgtg aacgtgatgc
     1801 tacggcccgc gatggggttg ccgaacgcgt cggtgaggcg gacccggggt ttgatcggca
     1861 ccggtcttcc caccacggca aattgagtat tcccggccac aggcaagagg agcgcgggcg
     1921 gtccgaccgt tcccgtggca cccaccacag cggggggaag gctcccggcg ctgaccgtca
     1981 gagtctgggc cccgaggaac cctcccaagg tccagataac ggagaccgat ccggtgttat
     2041 cggtgatcgc ggaggtccgg ctcacgctgc cgccgccggt g
//
LOCUS       DASWKS010000078         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_778043, whole genome shotgun sequence.
ACCESSION   DASWKS010000078 DASWKS010000000
VERSION     DASWKS010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778043"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..638)
                     /locus_tag="VGA78_02630"
     CDS             complement(186..638)
                     /locus_tag="VGA78_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892785.1"
                     /translation="MPRSLRDPEGRRSILDRLAALTPEHPRTWGRMEPAQLLPHLAGG
                     LRMALGERKAEGSPSGWLPAPVWRYLAIHVLPWPEGKIQSPPGAFNTPSLGWQRDREV
                     VVELIERFAATPPEKLGGAHPTFGRMRALDWDVLQYRHLDHHLRQFGV"
     gene            complement(661..1485)
                     /locus_tag="VGA78_02635"
     CDS             complement(661..1485)
                     /locus_tag="VGA78_02635"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9892786.1"
                     /translation="MRWNGPTLLALSALAAAPAAAQSVQYRSPAGVEYRSQADTGAVA
                     RAEAALAADPRNVDRIIELGVAQSGVRQFREAIQTFTRGLGIAPDHAMLYRWRGHRYL
                     SVREFDRARDDLTRGYGLDSTNYGILYHLGIVRYAGGDFAGAADAFRRAQPRAPNAGE
                     LAGSIDWLWMSLARAGKAAEAQAVLDRAPDTLSIEIAYTQRLRLYRGKIGPDAVITPA
                     DTTDIAVATLSYGVGNWYLVQGDTARARSWFERSVRSGGWPAFGFIISEVELKRSR"
     gene            complement(1493..>1933)
                     /locus_tag="VGA78_02640"
     CDS             complement(1493..>1933)
                     /locus_tag="VGA78_02640"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX9892787.1"
                     /translation="IGQLGVGEALVSMLQEKAVPMPVERTLMSPPRCRMGAITPEERA
                     AVRARSPVGTRYDTRVNRESAYEMLAARAAPGGSAARDPVPQPEQKSRAGGPLTDLMW
                     GTKRRQGMVETMAKQAARTMGGQLGRQILRGVLGGILGGPRRRS"
BASE COUNT          296 a          670 c          679 g          288 t
ORIGIN      
        1 gagaaatagc ccagcccggc ggcgatcctg agagcggatt gggtgatgcc gcggagccgc
       61 gcggtggagt cgtcggtcat cttgccccct gtccatcgga attcgagatg ttgcgccaga
      121 gccgccgcgt gcgggttggt aacgggtgac tgcaccgagg tttcagcccg gccgttcgga
      181 ccggctcaga cgccgaactg ccggaggtga tggtcgaggt gccggtattg caggacatcc
      241 cagtccaggg cccgcatccg gccgaacgtc ggatgggccc cgcccagctt ctcgggcggc
      301 gtggcggcga accgctcgat cagctcgact accacttccc gatcccgttg ccagccgagg
      361 ctgggcgtgt tgaacgcgcc cggaggagat tggatctttc cctcgggcca gggcaggacg
      421 tgaatcgcga ggtagcgcca gaccggggcg ggaagccagc cggaaggtga gccctcggcc
      481 ttccgttcgc ctaacgccat ccggaggccg cctgccaagt gaggcagcaa ctgcgccggc
      541 tccatccgtc cccaggtgcg ggggtgctcc ggggtgaggg cggcaagccg gtccagaatc
      601 gagcgtcgcc cttcgggatc acgcagggag cggggcattc ggccctccag gaatgaaact
      661 ctagcgcgaa cgcttgagct cgacctcgga aatgatgaac ccaaaggccg gccagccgcc
      721 ggagcgcacc gaacgctcga accaggaccg ggcccgggcc gtatcaccct gtaccaggta
      781 ccagttgccc accccgtagc tcagcgtggc gactgcgata tcggtggtgt cggccggggt
      841 gatcacggca tcggggccga tcttcccccg gtacagccgc agccgctggg tgtaggcgat
      901 ttcgatcgag agcgtgtcgg gggcccggtc caggaccgcc tgggcttcgg ccgccttgcc
      961 cgcccgcgcc agcgacatcc agagccaatc gatggagccg gccagctcgc cggcgttagg
     1021 cgcccgcggc tgagcccgcc tgaaggcgtc cgcggcgccg gcgaagtcac cgccggcgta
     1081 ccggacgatc cccagatgat acagaatgcc gtagttggtg ctgtcgagcc cgtagccgcg
     1141 ggtgaggtcg tcccgggccc ggtcgaactc gcgcaccgac aggtaccggt gaccgcgcca
     1201 gcggtacagc atggcatggt ccggagcgat ccccagtccg cgggtgaagg tctgaatggc
     1261 ttcgcgaaac tggcgcacgc ccgattgggc gacccccagc tcgatgatcc gatccacgtt
     1321 gcgcgggtcg gccgcgaggg cggcctcggc ccgggcgacg gcaccggtgt cggcttggga
     1381 gcggtactcg acgccggccg gggagcggta ttgcaccgac tgagccgcag ccggcgccgc
     1441 ggccagagcc gagagcgcta gcagggtggg gccgttccat ctcatgggtt cctcacgatc
     1501 ggcggcgcgg gccgcccagg ataccgccta acacgcctcg caggatctgc cggcccagct
     1561 gaccgcccat ggtgcgggcc gcctgcttgg ccatcgtttc caccatgccc tgacgtcgct
     1621 tggtgcccca catcagatcg gtcaacggcc caccggcccg tgacttctgt tctggctgcg
     1681 ggaccgggtc acgggcggcg gaaccacccg gcgcggctcg cgcggccagc atctcatagg
     1741 ccgactcccg attcacccgg gtatcgtagc gggtgccaac cgggctccga gcccggactg
     1801 ccgcccgctc ctccggtgtg attgcgccca tgcggcagcg cggcgggctc atcagggtgc
     1861 gctccaccgg catcgggacg gccttctcct gcagcatgga caccagcgcc tcgcccacgc
     1921 cgagctggcc gat
//
LOCUS       DASWKS010000079         3849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2618945, whole genome shotgun sequence.
ACCESSION   DASWKS010000079 DASWKS010000000
VERSION     DASWKS010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3849
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2618945"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VGA78_02645"
     CDS             complement(<1..329)
                     /locus_tag="VGA78_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892788.1"
                     /translation="MSRSVLPLMCLMVGLAFTQPLSAQRAPAPRRAAAPGQSADSARG
                     ISSSTMSGLRFRSLGPALTSGRVGDIAVDPSDPSIWYVAAASGGVWKTVNAGTTWTPI
                     FDDQGSYS"
     gene            complement(403..1317)
                     /locus_tag="VGA78_02650"
     CDS             complement(403..1317)
                     /locus_tag="VGA78_02650"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX9892789.1"
                     /translation="MPTLPAVPESARGGLLPRLVAWLDSQSRTQLLASAAIMVAGLAG
                     LSSAVGSDLVLVVFYLAPIGVSAYFVGRREGRSIALLSALSWTVMAEALSPASTVLPI
                     VLAAGVNRAVLFLVVAELLGSLRTAFEHERELARTDSLTGIANARSFTEVATSELLRS
                     RRYGRPLTVVYLDLDGFKEVNDRMGHAAGDVVLKRVAAACRDTLRRTDLVARLGGDEF
                     AALLPETGAEAAQLVIGKLQRVLSTAFASEGWTVTASFGVVTCAVAPDAVDAVLDRAD
                     RLTYRSKSNGPNQVTHETVSSWGQQQPI"
     gene            1404..2765
                     /locus_tag="VGA78_02655"
     CDS             1404..2765
                     /locus_tag="VGA78_02655"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9892790.1"
                     /translation="MKSHSPAPLAPEGSDGGGLKRELGLLDATMINAGTMIASAIFIV
                     PSAIAAGVQGSVPSLLVWIAAGLVSLCGALCVAELGAAMPEAGGQYVYLGRAFTPAIG
                     FLYGWSAFLVINTASIAAIAVGFATYLGFFTPLTPFAIQVVASLSIVGLTLLNTQGLR
                     VGATVQNLLTVLKIGALLAIPLLALVLPGGSAENLQPLWPAGGAGTVALAAGPALVAA
                     LWAYDGWIESTYVGSEIRNPGRNLPLSIVLSTALVMLLYVIANLGYLFLLAPGGVARS
                     ALVASDAMKVVLGTGGALFIGIAILVSTLGANNGIVFTSARIPFAMARQGLFFGWASR
                     LSSRTHSPNITLLVQMGVAVLLTLTGSYLQLTTYVVFVSFLFYALSAAAVLVLRRREP
                     DLTRPYRAWGYPITPVVFILFALYLVIDTIVQTPRESAVGVGIVLLGLPAYWYWRRSE
                     GSQ"
     gene            complement(2849..3673)
                     /locus_tag="VGA78_02660"
     CDS             complement(2849..3673)
                     /locus_tag="VGA78_02660"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEX9892791.1"
                     /translation="MPNIAVFHPQIVHFVIALFFVGLVLRLISLSGRLSWTNPAAATL
                     IILAALGSVTAAKSGDQAHGPAERVPGARDAVVEHEEAGERARNLLLVVGGLELLGVV
                     LRRQEKLIRAGSAVAGLVAGFFLYEAAEHGGEVVYTYAGGVGTRSGDTTDVRRLLLAG
                     LYHQSRADREAGRPDAAARLTDEMVRRVPGDPTVTFLAIESRIHDRKDPQGALADLTG
                     MTIPPDDIRLATRHGLLAAEALEAAGMRDSARAVLSSLATRFPEHQGVRQALVRLQ"
BASE COUNT          619 a         1321 c         1243 g          666 t
ORIGIN      
        1 gagtacgatc cctggtcgtc gaagatcggg gtccaggtag tgccggcgtt caccgtcttc
       61 cacaccccgc ccgacgccgc cgccacatac cagatgctgg ggtcggacgg gtcgaccgcg
      121 atgtccccca ctcggcccga agtgagggcc ggtcccaggc tccgaaaccg aagcccgctc
      181 attgtgctgc tgctgatccc gcgagccgag tcggcggatt gtcctggagc ggcagcgcgc
      241 cgaggcgctg gcgcacgctg ggcggacagc ggctgggtga aggccaggcc aaccatgagg
      301 cacatcagag gcaagacgct tcgggacatg acgggactcc cgcggatgga aattcagcga
      361 cgagccaatc gctcaatcgc tcaatcgtca atcatcaatg gctcagatgg gttgctgctg
      421 cccccaggag gagaccgttt cgtgggtcac ctggttgggt ccgttcgact tggagcggta
      481 ggtcaaccgg tcggcccggt ccaacaccgc gtccaccgca tccggcgcga ccgcgcaggt
      541 gaccacgccg aagctggccg tcacggtcca gccttcgctg gcgaaggcgg tgctcagcac
      601 ccgttgcagc ttgccgatga ccagctgggc ggcctccgcc ccggtttcgg ggagcagcgc
      661 cgcgaattca tcgcccccga gccgggcgac caggtcggtc cgacggagcg tgtcccggca
      721 cgccgcagcg acccgcttga ggaccacgtc cccggccgcg tggcccatcc ggtcgttcac
      781 ctccttgaac ccgtccagat ccagatagac caccgtgagg ggacggccat agcggcggga
      841 ccgcagcaat tccgaggtcg cgacttcggt gaaggatctg gcgttggcga tcccggtgag
      901 ggaatcggtc cgggccagct cccgctcgtg ctcgaacgca gtccggagcg agcccagcag
      961 ctcggccacc accaggaaca gcaccgcccg gttgaccccg gcggctagga cgatcgggag
     1021 cacggtcgag gccggcgaaa gggcctccgc catcacggtc caggacaggg ccgagagcag
     1081 agcgatggac cgcccctccc gccgtcccac gaaataggcc gacacgccga tgggggcgag
     1141 gtagaacacc accagcacca gatcgctgcc aacggcggag gacagtcccg ccagcccggc
     1201 caccatgatg gcggcgctgg ccaagagctg ggtgcgcgac tggctgtcca gccaggccac
     1261 cagtcgcggg agcaggccgc cgcgcgctga ctccgggact gcgggaagtg tgggcaatgg
     1321 tcctatggag tgaacggcac ccgcaatatg gcgggggctg gtgacgggtg gtagcttgcg
     1381 gcatcctgat tccatcccga ctcgtgaagt cccattcccc agcgccgctc gcccccgaag
     1441 gctctgacgg tggcggcctc aaacgcgagc tcggccttct cgacgcgacc atgatcaacg
     1501 ccgggacgat gatcgcctcc gcgatcttca tcgtcccgag cgccattgcg gccggggtgc
     1561 agggctcggt gccgtcgctg ctcgtctgga tcgccgccgg gctggtctct ctctgtggcg
     1621 cgctctgcgt ggctgagctg ggcgccgcca tgccggaggc cggcgggcag tacgtgtacc
     1681 tgggacgggc cttcaccccg gcgatcggtt ttctctacgg ctggtcggcg tttctcgtca
     1741 tcaatacggc gtccatcgcc gccatcgccg tcgggtttgc gacctacctt ggcttcttca
     1801 ccccgcttac gcctttcgcc attcaggtgg tcgcttcact cagcatcgtg gggttgactc
     1861 tgctcaacac ccagggtctc agggtcggcg ccacggtcca gaatctgctg accgtgctca
     1921 agatcggcgc gctgctggcg ataccgctgc tggcgctggt gctgcccggc gggagcgcgg
     1981 agaacctgca gcccttgtgg ccggccggcg gtgccgggac cgtggcgctc gcggccggcc
     2041 ccgccctggt cgcggcgctt tgggcctatg acggctggat cgagtcgacc tatgtgggca
     2101 gcgaaatccg gaaccccggg cgcaacctgc cactttccat cgtgctgtcc actgccctgg
     2161 tgatgctgct ctatgtcatc gcgaacttgg gctacctctt cctgcttgcg cccgggggcg
     2221 tggcccgttc cgccttggtg gcttcggacg ccatgaaggt ggtgctcggt accggcggag
     2281 ccctgttcat cggcatagcc attctggttt cgaccctcgg ggccaacaac ggcatcgtgt
     2341 tcacctcggc ccggattccg ttcgcgatgg cacgccaggg cctgttcttc ggctgggcgt
     2401 cccggctgag ttcccgaacc cactccccca acatcacgtt gctggttcag atgggcgtgg
     2461 ctgtactgct gaccctgacc ggctcctacc tgcagctcac cacctacgtg gtctttgtat
     2521 cgttcctgtt ctatgccctc tccgccgccg cggtgctggt cctccgtcgc cgggaaccgg
     2581 atctgacccg gccctatcgg gcctggggct atcccatcac gccggtggta ttcattcttt
     2641 tcgcgctgta cctggtgatc gacaccatcg ttcagacacc ccgcgagtcc gcggtggggg
     2701 tgggcatcgt gctgctggga ttaccggcct attggtattg gcgtcggagt gagggctccc
     2761 aataaacatt gacgattgac gattgacgat tgcgtccgaa aactggcgcc aacgcaatcg
     2821 tcattcatca atcgtcaatc gtcaatgtct attggagtcg caccagcgcc tgcctcacgc
     2881 cctgatgttc ggggaatcgc gtggccaggc tggagagcac cgcgcgagcc gagtcacgca
     2941 tcccggccgc ctcgagcgct tcggcggcga gcaggccgtg gcgggtggcg aggcggatgt
     3001 cgtcaggagg aatggtcatc ccggtcagat cggccaacgc cccctgggga tctttccggt
     3061 cgtggatgcg cgactcgatg gcgaggaagg tcacggtcgg gtcccccggt acgcgacgaa
     3121 ccatctcgtc agtgagccga gccgctgcgt cgggccgacc ggcctcccgg tcggcccggg
     3181 actgatgata gaggccggcg agcagaagtc tccggacatc ggtggtgtct cccgaccggg
     3241 tacccacgcc gccggcatac gtatacacca cttcaccgcc gtgctcggcc gcttcataga
     3301 gaaagaatcc ggcgaccagc cccgccaccg cggaccccgc gcggatgagc ttctcctgcc
     3361 gccggagtac cacccccagc aactccaatc cgcccaccac cagcaagaga ttgcgggccc
     3421 gttcgccggc ctcctcgtgc tccaccacgg catccctcgc gcccgggacc cgttcggccg
     3481 gaccatgcgc ctggtcgcct gatttcgccg ctgtgaccga ccccagcgcc gcgaggatga
     3541 tgagggtcgc ggcggcgggg ttggtccagc tcagtcggcc gctcagcgag atcagccgaa
     3601 ggaccagccc gacgaagaaa agggcgatga caaaatggac gatctgcggg tgaaagacgg
     3661 cgatgtttgg cattccaaaa tctagtactc agtactcagt actcagtact atttgttccc
     3721 cgacgccatt tggctggctt cgggcagtcc ccgcagccgg agcatcgcga gcactccgaa
     3781 cagtggcccc ggagccagcg ccacaaaccc gatggcccac ccccatcgat ccaccagcgc
     3841 cgggaccaa
//
LOCUS       DASWKS010000080         3848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1149099, whole genome shotgun sequence.
ACCESSION   DASWKS010000080 DASWKS010000000
VERSION     DASWKS010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149099"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1486)
                     /locus_tag="VGA78_02665"
     CDS             complement(<1..1486)
                     /locus_tag="VGA78_02665"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9892792.1"
                     /translation="MDNPIHSIRLAIRSLRHTPGFALTAILTLALGIGLSTAVFTVVD
                     ALLIRELPVREQDRLVVLWGQSADRAFDHWPLGFASAREFGRRTRTLERVAFVGYEGA
                     WPQPIRDEGGMTRLRQAVVSGEFFEVLGVQPVLGRALRPEDDVVGAAPVVVLSHSAWQ
                     RYFGGDADAVGRQILVHGNGVSYTIVGVMPQGLDYPRGTDFWAPVVPVRTTPGTDSTF
                     ADVDLIGRLGPSTTGSMAREELTAFFGRPEASAWSRSLRGVVHSFPRLILGDVKPAVI
                     AFTAAVGLLLLITCINVANLLMVRGLARVREVALRSALGAGRRRVMLQLLTENALLAF
                     AGGALGVLVAVGAVGSFVAFAPAGVPRLDEIQVDLTALAGALAITGFAMFLFGLAPAI
                     FTSRVDLQQVLRSGTHQSAGRGSRLATEGLVAAQIALAVLVLSAAGLIARSLLKLERA
                     DLSFEGSQLLIAELAIRYDRFDTREKQLAMLDRLVPAIQAVPGVR"
     gene            1616..2545
                     /locus_tag="VGA78_02670"
     CDS             1616..2545
                     /locus_tag="VGA78_02670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892793.1"
                     /translation="MRTAITTIGIAVALGGVLPAVSAQPVTPGRRAHHALVYDEARQL
                     ILLTAGSTPVNGGQSFTFFNDLWAFDGSGWRPLGESGERLSGIRLAYDAPRHRVTSFG
                     GYNGRSMGELRALEGEQWRILGRLAEMLVAEPGFVFDLGRNRFVAFGGSSGPGRPAGD
                     TWEYDGTSWTRLAPAGPPPRQAHVMVFDERRGRTLVFGGMGAGASGQPPPSLDDTWEF
                     DGRTWVRREVSGPSARHSAGVAYDSKRGLVILFGGSAMTDSWATPGLGTGPSGPGSPR
                     LGPSRAVWATWHTTNGATGWSCSGAAKGIPMGT"
     gene            complement(2621..3061)
                     /locus_tag="VGA78_02675"
     CDS             complement(2621..3061)
                     /locus_tag="VGA78_02675"
                     /inference="COORDINATES: protein motif:HMM:NF025160.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HXXEE domain-containing protein"
                     /protein_id="HEX9892794.1"
                     /translation="MTLQPGNRPNPPGRFEMTFGALVLTQAAHSVEEYFGRLWESFPP
                     ARFLTGLISPDREIGFLVLNTALVAFGVWCLLGPVRRGRPSAVPLAWFWVTIQIINGV
                     GHPLWSLRQGGYTPGVATAPLLLLLALYLAWQLRRGSPTSVATV"
     gene            complement(3136..>3848)
                     /locus_tag="VGA78_02680"
     CDS             complement(3136..>3848)
                     /locus_tag="VGA78_02680"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9892795.1"
                     /translation="QAAPGESAALIALLGAWLDAGLDLGNHTYSHLRLFDVPLPEYQA
                     DFLRGERETSRLMAARGRRPRYFRHPTLNTGPDLATKGAFEGFLSERGYAVAPVTIDN
                     DDYLYALAYDRARGRADSGLMARLGDDYIRYMEATFGFYEALADSLLGRQLSQVLLLH
                     ANALNADQLPRLANMIAGRGYRFVSLDQALQDPAYQLPDRYVGARGPSWLVRWAITSG
                     RQPGEPPDVPAWVRASGR"
BASE COUNT          713 a         1271 c         1312 g          552 t
ORIGIN      
        1 cccgcacccc agggaccgcc tggatggccg gcaccagacg gtccagcatc gcgagctgct
       61 tctcccgggt atcgaatcga tcgtaccgga tggccagctc ggcgatcagc agctgggagc
      121 cctcgaacga gagatcggcc cgctccagct tgaggaggct tcgggcgatg aggccggcgg
      181 cggagaggac cagcaccgca agggcgatct gcgccgccac caatccctcc gtcgccagcc
      241 gggaacctcg gccggcactc tggtgtgtcc ccgaccggag cacctgctgc aggtcgaccc
      301 gtgaggtaaa gatcgccggc gcgagcccga agaggaacat tgcgaatccg gtgatcgcga
      361 gcgcgccggc cagagcggtc agatccacct ggatctcgtc caggcgagga acccccgccg
      421 gggcgaacgc gacgaagctc cctaccgcgc cgaccgccac caggacgccc agggcaccgc
      481 cggcaaacgc gagaagcgca ttctcggtga ggagctggag catgaccctt cgccgcccag
      541 ccccaagcgc cgatcggagc gccacctcac gcacccgggc gagtccccgc accatgagga
      601 ggttggcgac gttgatacag gtgatcagga gcagcaaacc gaccgccgcg gtgaacgcga
      661 tcacggccgg cttgacgtcg cccagaatga gccgggggaa cgagtggacc actccgcgca
      721 ggctgcgaga ccaggccgag gcctcaggcc gaccgaagaa ggccgtcagc tcctcccggg
      781 ccatggaacc agtagtggaa ggcccaagcc gcccgatcag gtccacgtcc gcaaaggtcg
      841 agtcggtccc gggtgtggtt cgcaccggga ccaccggcgc ccagaagtcg gtacctctgg
      901 gatagtcgag cccctggggc atgacaccga cgatggtata gctcacgccg tttccatgca
      961 ccagaatctg ccggcccacg gcatcggcgt cgccaccgaa gtaacgttgc caggcactgt
     1021 ggctcagcac caccaccggc gccgcgccca cgacgtcgtc ctcgggacgg agagcccgac
     1081 ccagcacggg ctgcacccca agcacctcga agaactcgcc cgacacgacc gcctggcgca
     1141 ggcgggtcat cccgccctcg tcccgaatcg gttgcggcca cgcgccttcg taccccacga
     1201 acgcaacccg ctccagggtg cgcgtacgac gcccgaattc acgagcgctc gcgaaaccca
     1261 gaggccagtg gtcaaaagcg cgatcggcgc tttgtcccca gagcactacc agacggtctt
     1321 gctcccgaac cggtagctcc cggatcagca atgcatcgac cacggtgaag accgcggtcg
     1381 acaggccgat gccgagtgct aaagtcagga tagcagttaa ggcgaatccc ggagtatggc
     1441 ggagactccg gatggcaagg cgaatactgt gaatcgggtt atccatgagt tgggaggtcg
     1501 gctgggtact acgcaaagtg cgctatcagg ccgatggccc gcaaccggga ggacgctggc
     1561 cgcccgaaac agagcctatg gccggctcgt ccggatgaga tccgaggaga gcagcatgag
     1621 aaccgcgatc accacgatcg gcatagccgt tgccctgggt ggcgtccttc cggctgtctc
     1681 agcccagccc gtcacgccgg gacgacgggc ccatcacgca ctggtgtatg acgaagcgcg
     1741 tcagctgata ttgcttaccg cgggcagtac gccggtgaac ggcggccaga gcttcacgtt
     1801 tttcaacgac ctgtgggcct tcgacggatc cgggtggcgg ccgctcggcg aatcgggcga
     1861 gcggttgtcc ggtatccggt tggcgtatga cgcgccccgt caccgagtca cgtccttcgg
     1921 cggctacaac gggcgttcga tgggcgagct gcgggcgctc gagggcgaac agtggcgcat
     1981 cctgggccgg ctggcggaga tgctggtggc cgaaccgggg ttcgtgttcg acctcggccg
     2041 gaaccgattc gtggccttcg gcggctcgag cggtccgggg cggccggccg gcgacacctg
     2101 ggagtatgac gggactagct ggaccagact cgcccccgcc ggcccaccgc cgcggcaggc
     2161 gcacgtcatg gtattcgacg aacgtcgggg gcggactctg gtgttcggtg gcatgggtgc
     2221 tggggcgtcg ggccagccac cgccctcact cgatgacacc tgggagttcg acgggcggac
     2281 ctgggtccgg cgagaggtct cgggcccctc ggcgcgtcac agcgcagggg tcgcctacga
     2341 ctccaagcgc gggctcgtca tcctgttcgg gggctcggca atgaccgatt cctgggcgac
     2401 acctggtctt gggacgggac caagtggacc cggctcgccg agactgggcc cgagccgcgc
     2461 ggtatgggct acctggcata cgacaaacgg cgcgaccggg tggtcctgtt cgggggccgc
     2521 aaagggtatc ccgatgggga cctgaatgat acctgggagt gggatggcac ccgctggcag
     2581 cgggtcggca actaatccga tcagctccct gtgaaagacg tcagacggtc gcgaccgagg
     2641 tgggtgatcc gcgccggagc tgccaggcga ggtagagtgc cagcagcagg agcaggggcg
     2701 cagtggcgac gccgggtgta tagccgccct gccgcaggct ccacagggga tggcccacgc
     2761 cgttgatgat ctgaattgtc acccagaacc acgccagtgg tacggcggac ggtcgtccgc
     2821 ggcgaaccgg ccccagcagg caccagaccc cgaacgccac cagggcggta ttgaggacca
     2881 gaaagcctat ctcgcggtct ggcgagatca ggccggtaag aaagcgcgcc gggggaaagg
     2941 actcccacaa ccggccgaag tactcttcca ccgaatgagc cgcctgggtc aggaccaggg
     3001 cgccgaaggt catctcgaac cgccccggcg gattcggccg gttcccgggc tgaagggtca
     3061 tcgtctgcaa cttagcggcg ggaatccttg ctcgtcagct cgatcgcttc cgccaacgtc
     3121 ataccgtctg ttgcgctacc gacccgaagc gcgaacccag gcgggtacgt ctgggggctc
     3181 gcctggctgg cggccactgg taatcgccca gcgcaccagc cacgatggcc cgcgcgcacc
     3241 gacgtatcgg tcgggcagct gataagcagg atcctgcagc gcctggtcca gggagacaaa
     3301 tcgatacccc cttcccgcga tcatgttcgc cagccgggga agctggtcgg cgttgagagc
     3361 gttggcgtgc aacagcagga cctgcgacag ttggcggccc aggagggaat cggccagtgc
     3421 ctcgtagaag ccgaaagtcg cctccatata ccggatgtag tcgtcaccga gccgcgccat
     3481 gagcccacta tccgcccgtc cgcgggcgcg atcgtacgcc agggcataca gataatcgtc
     3541 gttatcgatc gtgaccggtg ccacggcgta gccgcgctcg ctgagaaagc cctcaaacgc
     3601 tcccttcgtc gccaaatccg gtccggtatt gagcgtggga tggcggaagt agcgcggccg
     3661 gcggccccga gccgccatca ggcggctggt ctcgcgttcc ccgcgcagga aatcggcctg
     3721 gtattcgggg agcgggacgt cgaagaggcg aaggtgggag taggtgtgat tgccaaggtc
     3781 caatccggca tcgagccacg ccccgagcag ggcaatgagc gcggccgatt caccgggagc
     3841 cgcctgca
//
LOCUS       DASWKS010000081         5740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3357497, whole genome shotgun sequence.
ACCESSION   DASWKS010000081 DASWKS010000000
VERSION     DASWKS010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3357497"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..2522)
                     /locus_tag="VGA78_02685"
     CDS             complement(114..2522)
                     /locus_tag="VGA78_02685"
                     /inference="COORDINATES: protein motif:HMM:TIGR04312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor B family protein"
                     /protein_id="HEX9892796.1"
                     /translation="MLLILTVGMAAPLDAQTWPRESPPAVGFGVSVVLTGDELLVGRT
                     GMVAGFPMPPSNTGAVHRYRKSGGAWAETGSLSPSDTRIGDGFATALSVDGVWLAVGA
                     PQHATTGAVYLYERRAGTWTQAAKLVPAAGVSGDQFGQSVALKGADLIVGAPGRDSAR
                     GVTYGFRRGRSGTWEPVGEVGRGAATGDRFGAALALAVDVALIGAPGPVPAGFGGNIQ
                     LRRGSAIVYRANMAGRWSEVVRLEPGGDTTAAFGGAVAFVGAEAYVGAPHTKTATGAV
                     YRFREQAGSWVSAGKVQPTTLAPPAAYGSSIAGHATALFVGAPVANGLGGQVYVFNRS
                     GDTWTEKQVLTQRVVGLGVLFGSSVAVAGDQAVVGGPFAEFFEGSGYAYARDPASGEW
                     KDAGAVTDRPAGLPAVTGREVRCEQGKAALFGCEQMDLLGFLPVSALGGKRGIMLNDI
                     WGWTDEASSREFALVGRMDGTAFVEITDPSNPRYLGELPLHAGAKPNLWRDIKVYKNH
                     AFIVSDGAGPHGIQVFDLTQLLTALGGSRTFTETAHYDKIASAHNIAINEESGFAYPI
                     GNSGGGETCGGALHMVDIRDPRNPKFAGCYADPATGNARTGYTHDAQCVTYKGPDSRY
                     TGREICFNASETAVGIADVTDKANPKPIAVASYPNTAYAHQGWLTEDHRYFYLDDEGD
                     ELSGTVPKTRTLVWDMTKLDEPVLVKEFLGTTSATDHNLYVRGRYMFQSNYVSGVRVI
                     DISDPTNPKETGYFDTVPFGENVPGFAGSWSNYPYFKSGTIIATSMREGLFILRHRPT
                     QLVP"
     gene            complement(2781..3185)
                     /locus_tag="VGA78_02690"
     CDS             complement(2781..3185)
                     /locus_tag="VGA78_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892797.1"
                     /translation="MRIPILVAGALVVFIVTPLVAQRPRQRPEMTVAGIQRRNFSRDR
                     QEIERYFVAYRNDLPPGLAKRERLPPGVQKQLVKNGELPPGLEPEIQPLPRALEVKLS
                     ALDVAFRRGFVDGKVLTWDRKTRRVVDIIVVY"
     gene            3294..4670
                     /locus_tag="VGA78_02695"
     CDS             3294..4670
                     /locus_tag="VGA78_02695"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9892798.1"
                     /translation="MLRIAIVGAGPTGFFLAEKLLGQDTTPLAVDLFERLPTPYGLVR
                     YGVAPDHEKIRNVTRSFDKVAARTGFRFFGNTDVGRHLSLDDLRQCYHQICFTTGAQT
                     DRHMGIPGEDLPGSHAATEFVAWYNGHPDYCDRVFDLSAERVAVVGVGNVAIDVARML
                     CRTPEELATTDIADHALEALRTSRVREVYLLGRRGPAQAAFTNPEVKELGELAGADVT
                     ARPEEVALDPLSAAMLAREDDPSTRKKLDILAGYAGRERSGKPRLLAIRFLVSPVELL
                     ARDGRVGVMRLARNRLAEGVDGELKAQPTGETEELPVELVFRSVGYRGIAVPGLPFDE
                     KRGIIPNQSGRVVDILTPERAPLTGFYVSGWIKRGPSGVIGTNKPDAAETAEAMLADA
                     GAGQTLSPTGEDIEPLLRQRQPELVTWSDWVKLAAGETARGKPLGRPRVKHTRIAEML
                     AAIRSTED"
     gene            complement(4675..5469)
                     /locus_tag="VGA78_02700"
     CDS             complement(4675..5469)
                     /locus_tag="VGA78_02700"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX9892799.1"
                     /translation="MTYATLRYPVPSRYLATLALPVWMTAGMMPLHAQGQKWPANSME
                     RPRPPVVSPGPVGSPVTPPGDAIVLFDGRSLDQWQGGPGTPGWKLEDGYAEVVAGGGS
                     ISTRRHFGDIQVHLEWATPRPPHGTGQDRGNSGVFLMGMYEVQILDSYQNDTYPDGQA
                     GALYGQQPPLVNASRPPGEWQSYDIIFRRPHFNRDGSLLRPARATVLHNGVLIQDGVA
                     FTGRTVHGAEAKYSPHADLGPLTLQDHGQPVRFRNIWVREIPSTEY"
BASE COUNT          968 a         1910 c         1921 g          941 t
ORIGIN      
        1 cgcgccgccg ctttgagcgg cggcgcgcac ctcggcaccc ggaaccacgc cgctctgcgc
       61 cgcggcgcgc gaacccggca ccaggaacag cagcagacca aggcccagcc ggttcatggc
      121 accagctggg tcggccggtg ccgcagtatg aacagtcctt cccgcatgct ggtggcgatg
      181 atggtgccgc tcttgaaata ggggtagttg ctccatgacc cggcaaagcc gggcacattc
      241 tccccgaagg gcacggtgtc gaaatagccg gtctccttgg ggttggttgg atccgagatg
      301 tcgatcaccc ggaccccgct cacataattg gactggaaca tgtaccggcc gcggacatag
      361 agattgtggt ccgtggccga ggtggtgccg aggaattcct tgaccagtac cggctcgtcc
      421 agcttggtca tgtcccacac cagggtccgg gtcttcggca cggtgccgct caactcatca
      481 ccctcgtcgt ccagatagaa ataacggtgg tcctcggtga gccacccctg gtgggcgtag
      541 gcggtattgg gatacgacgc caccgcgatc ggcttggggt tggccttgtc ggtcacgtcg
      601 gcgatgccca ccgcggtttc cgaggcgttg aagcagatct cgcggccggt atagcggcta
      661 tccggacctt tgtaggtgac gcactgggca tcgtgggtat agccggtgcg ggcgttcccg
      721 gtggcgggat cggcgtaaca cccggcgaac ttggggttcc ggggatcgcg gatgtccacc
      781 atgtgcaggg cgccgccgca ggtctcgccc ccgccgctgt tgccgatcgg ataggcaaac
      841 ccgctctctt cattgatcgc gatgttgtgg gcgctggcga tcttgtcgta gtgtgccgtc
      901 tcggtgaagg tccgcgaccc acccagggcg gtcaggagct gggtcaggtc gaacacctgg
      961 atgccgtgcg ggccggcgcc gtcggagacg atgaaggcgt ggttcttata gaccttgatg
     1021 tcgcgccaca ggttgggctt ggcgccggca tggagcggga gctcgcccag gtagcgcggg
     1081 ttgctcgggt cggtgatctc gacgaaggcg gtgccgtcca tccggcccac cagggcgaat
     1141 tcccggctgc tggcctcgtc ggtccagccc cagatgtcgt tgagcatgat gccgcgcttg
     1201 ccgcctaacg cactcaccgg caggaagccg agcaggtcca tctgctcgca gccgaagagg
     1261 gcggccttgc cctgctcgca gcgaacctcc cggccggtca cggcgggcag gcccgcaggc
     1321 cggtcggtga cggccccggc gtctttccat tccccgctgg ccgggtcgcg agcgtacgca
     1381 tagcccgagc cctcgaagaa ctcggcgaac ggcccgccga ccaccgcctg gtctcccgcc
     1441 accgcgaccg agctgccgaa cagcactccc agaccgacca cccgctgggt caggacctgc
     1501 ttttcggtcc aagtgtctcc gcttcggttg aacacgtaga cctggccgcc cagcccgttg
     1561 gcgacgggtg cgcccacgaa gagcgccgtt gcgtggccgg caatcgagga gccgtaggcc
     1621 gccggtgggg ccagcgtggt cggctggact ttgccggcgc tgacccagct gccggcttgc
     1681 tcccggaagc ggtagacggc gccggtcgcg gtcttggtgt ggggagcgcc gacgtacgcc
     1741 tcggccccga cgaacgccac ggcaccacca aacgccgcgg tggtatcgcc acctggctcg
     1801 agccggacca cctcgctcca ccgcccggcc atattggccc ggtagacgat ggccgaaccc
     1861 cgcctcagtt ggatgttccc gccgaagccg gccggcaccg gtccgggcgc gccgatcagg
     1921 gcaacatcga cggcgagtgc cagcgcggct ccgaagcggt caccggtggc ggcaccccgg
     1981 cccacctcgc caaccggctc ccacgttcca gaccggccgc gcctgaatcc gtaggtcacc
     2041 ccgcgagcgg aatcgcgtcc cggtgcgccc acgatgaggt cggccccctt gagtgccacc
     2101 gattgcccga actggtctcc cgagaccccg gcggcgggta ccagcttggc cgcctgggtc
     2161 caggttcccg cccggcgctc gtagaggtag accgctccgg tagtcgcgtg ctggggagca
     2221 cccacggcga gccagacgcc atcaaccgac agcgcggtcg cgaagccgtc gccgatccgc
     2281 gtatcggagg gtgaaagcga gcccgtttcg gcccaggctc ccccgctctt ccggtaccgg
     2341 tgaaccgcac ccgtgttgga cggtggcatg gggaaaccgg cgaccatgcc ggtgcgcccc
     2401 accaacaact cgtcgccggt gaggactacc gaaacgccga acccgacggc ggggggagat
     2461 tcgcgcggcc aggtctgggc gtcgaggggg gcggccatac cgaccgtcag aatcaggagc
     2521 atctggtgca cgggtatagc ctctgggtcg cgaacgcagg aaggtactac acagctacgg
     2581 gttgcaaagg aggagggttt caggagcaac gttccaggta ccgagttccg ggttccaggt
     2641 gcggtgctgg gtgccacggc ctacgtgcat ctgcgaatgc gggatgtagt tcagatccac
     2701 gcggcacagt gccctcggca ccgcacgtac caccgcaccc agcaccgcac ctggaacaag
     2761 gaaccaggaa cacggaacga tcagtacacg actatgatgt cgaccaccct tcgggtcttc
     2821 cggtcccagg tgagcacctt cccatccacg aaccctctcc tgaaggccac gtccagagcc
     2881 gaaagcttga cttccagggc tcttggcaag ggctggatct ccggctccag cccgggcgga
     2941 agctctccgt ttttcaccag ctgcttctgc acgccgggcg gcaggcgctc ccgcttcgcc
     3001 agcccgggtg gaagatcgtt acggtacgcc acgaaataac gctcgatctc ctgccggtcc
     3061 ctggaaaagt tgcgacgctg gattccagcg acggtcatct cgggtcgttg ccggggtcgt
     3121 tgcgcaacca gcggtgtcac gatgaacacc acgagcgcac cggcgaccag tatgggaatt
     3181 cgcatgaatt ctcctcatgt gcaccccccg atgggagacg ccgcccccgg agtcgccacc
     3241 acgaaagcgg ccctgtacta tttcgagacc ccagcgaatg actcggaagg ctcatgctac
     3301 gcatcgccat cgtgggagca gggccaaccg gcttcttcct ggcggagaag ctcctcggcc
     3361 aggacaccac tcccctggcg gtcgacctgt tcgagcggct acccacgccg tacggcctgg
     3421 ttcgctacgg cgtggcaccg gaccacgaga agatccgcaa cgtcacccgc agcttcgaca
     3481 aggtggccgc ccgaaccggg ttccggttct tcgggaacac cgacgtgggg cgccacctgt
     3541 cactggacga tctgcggcag tgctatcacc agatctgctt caccaccggc gcccagaccg
     3601 accgccacat ggggattcca ggcgaggacc tgcccggcag ccacgcggcg accgagttcg
     3661 tcgcctggta caacggccac ccggattact gcgaccgcgt cttcgatctc tcggcggagc
     3721 gggtggcggt cgttggggtg gggaatgtgg cgatcgacgt ggcgcgcatg ctgtgccgca
     3781 cgcctgagga attggcaacc accgatatcg ccgatcacgc cctggaggcg ctccgaacca
     3841 gccgggtacg tgaggtgtac ttgctgggcc ggcgggggcc ggcccaggcc gctttcacca
     3901 atcccgaggt gaaggagctg ggcgagctgg ccggtgcgga tgtgaccgcc cggccggagg
     3961 aagtggctct cgatccgctg agcgcggcga tgctggcgcg cgaggacgac cccagcaccc
     4021 gcaagaagct cgacatcctc gcgggttacg ccgggcggga acggagtggc aagccccgct
     4081 tgctcgccat ccggtttctg gtctcaccgg tggagttgct ggcgcgagac ggacgggtcg
     4141 gtgtcatgcg cctggcgcgg aatcggctgg cggagggggt ggatggggag ctcaaggccc
     4201 agcccaccgg cgaaacggag gagctgccgg ttgagctggt gtttcgctca gtggggtatc
     4261 gcggaatcgc ggtcccggga ctgcccttcg acgagaaacg gggcatcatc ccgaaccaga
     4321 gcggacgggt ggtcgacatc ctcacgccgg agcgcgcccc gttgaccggg ttctatgtct
     4381 ccggatggat caagcgcgga ccttccggcg tcatcgggac caacaagccc gacgccgccg
     4441 aaacagcgga ggcgatgctg gcggatgccg gggcggggca gaccctatcc cccaccggcg
     4501 aagacatcga accgctgctg cgccaacgcc agcccgagct ggtgacctgg agcgactggg
     4561 tgaagctggc ggccggcgaa accgcgaggg ggaaacccct gggaaggccg cgggtcaaac
     4621 acaccaggat cgcggaaatg ctggcggcaa tcagaagtac tgaggactga gtcctcaata
     4681 ctcagtactt ggtatttccc tgacccagat gttccggaag cgcaccggtt ggccgtggtc
     4741 ctgcaatgtc aaagggccga ggtcggcgtg aggcgaatac ttcgcctccg ctccatgcac
     4801 cgtgcggccg gtgaaggcaa ccccatcctg aatcaggact ccgttgtgca gcacggtcgc
     4861 ccgggccggg cgcagcaggc tgccgtcccg attgaaatgg ggccggcgga aaatgatgtc
     4921 gtagctctgc cattcacccg gcggccggct ggcgttgacc agcggaggct gctgaccgta
     4981 gagggctccg gcctgtccat cggggtaggt gtcgttctgg taggagtcga gtatctggac
     5041 ctcgtacatg cccatgagaa acaccccgct gttcccccgg tcttgtccgg tgccatgcgg
     5101 tggcctgggc gtggcccatt ccagatgcac ctgaatgtcc ccgaagtgtc ggcgggtcga
     5161 gatgctccct cccccagcca cgacctccgc gtacccgtcc tcgagcttcc agccgggcgt
     5221 cccagggccc ccttgccatt ggtccagcga ccggccgtcg aacagcacga tagcgtcgcc
     5281 tggcggcgtc accggcgacc ccaccggccc gggagacaca acgggaggcc gaggccgttc
     5341 catcgagttc gcgggccatt tctgtccctg ggcgtgcaac ggcatcatgc ctgcagtcat
     5401 ccagaccgga agcgccaagg ttgcgaggta gcgggacgga accgggtacc gtagggttgc
     5461 gtatgtcatg agggaccttc gtgcgctaat ttccacggtg aaccgccccg gtgcggttcc
     5521 tggacacgtg gggcgtcccc gaagatatgg acacccctcc caggccctgg gacgtttgga
     5581 gacaagtaca tgaaattaaa gcgtttgaca accatttcct cgctgttcgt tctgcccctc
     5641 gcggtcggcg ccttcgtgct ccagggtcag gtgcaaaccc cggtcgacgg gccccggctg
     5701 ttcgcccggg tcaagcagat ggtcgagcag cacgcggtcg
//
LOCUS       DASWKS010000082         4535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_34294, whole genome shotgun sequence.
ACCESSION   DASWKS010000082 DASWKS010000000
VERSION     DASWKS010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4535
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34294"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..1316)
                     /locus_tag="VGA78_02705"
     CDS             complement(102..1316)
                     /locus_tag="VGA78_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892800.1"
                     /translation="MKAELGGTLPATLWALAVGAVVMAPFLGQLSTSLLAGRESQEEL
                     LEQYSADASLEFAIWELQNDQTYRDSVDVAPGTPISLSPAVTINGITTSTSATAIPIG
                     IWTAMANSPAGIGAGGDLAWNGADYIYALAGGSTNGFRRYSISSNNWTSLASTPAAIG
                     PGGSLAYAGGDFLYALRGGNQTTFWRYSISGNTWVTRAAAPARVDDGGSLVYTGGNDL
                     YALRGNNNRAFWRYSISGNSWSTLANAPANVGPGGALAFTGGDSIYTFRGVNQTAFWR
                     YSIAGDSWANLANTLASVNAGGALTWAASDYLFALRGNTTTTAWRYQLSRDVWIPVAA
                     APATVDFGGAMVYVGSDTIYALRGNGQQNFWRFEITPPEFDLTSTAGDFTIDARIRIT
                     GSTINVLIWDIN"
     gene            complement(1313..1795)
                     /locus_tag="VGA78_02710"
     CDS             complement(1313..1795)
                     /locus_tag="VGA78_02710"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9892801.1"
                     /translation="MRVRADERGFTIPEMLIATVLVASAAGLIATATYEVFVVARGGN
                     ARLAALSDLESASLWVGRDASEAQSFAAGSGTVYGTLTTSDPTIQYRYSYSAANTALV
                     REVVVSGSPTSTLQIARRIASQGNVAFSLSGSLLTVSITSTVGPTSESTTLKLGMRVK
                     "
     gene            complement(1792..2262)
                     /locus_tag="VGA78_02715"
     CDS             complement(1792..2262)
                     /locus_tag="VGA78_02715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892802.1"
                     /translation="MTHPIRQTRTASRITRKGLLRAFATRFHRDQRGISLPEELMSIA
                     MLALSVGLVVVGIYTASVGTKVRHARVNATTLARSQMELVLDGSYNADPTAVPYPTVA
                     PVSGYTVNVGVEYWTAPSGPFTSTVRNDGLQRVTVSVSDAEGQILALEGYVVNR"
     gene            complement(2259..3479)
                     /locus_tag="VGA78_02720"
     CDS             complement(2259..3479)
                     /locus_tag="VGA78_02720"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9892803.1"
                     /translation="MAYRYLAVGNDGKESRGVLDVASEEAAERTLWQRELTILDLSRV
                     RRQVDLAKYFPSLLGPRPKDVILFSRQLATLVDSGVALTAGLQLLGTQIGNKYLRRVL
                     GEIEDEIHMGTSLSAAMAKHPVAFSELYCRMIETGERSGNLGPALRQLADYEERIQIT
                     LAKVRGAMAYPLFVLTLAVFVVAILVKVALPPMVRLFEEFSAELPWPTRFLIAITNFF
                     GEYGLTLLIGAAVLSVALFLFSRRPSGRLLLHRLMLRLPLLGKISIHGSVARLSRTLS
                     ALIKAGLALPEALALSKETIGNLILQEALENVRQETLLGRGLSEPLSRVKQFPPMMSY
                     LARVGEETGTLDTHLATVADFYEQEVDRSLRVMTTVLEPALIIVVGLVVGFVAVSIMM
                     PMYNLLGAVQAGIP"
     gene            complement(3561..>4535)
                     /locus_tag="VGA78_02725"
     CDS             complement(3561..>4535)
                     /locus_tag="VGA78_02725"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HEX9892804.1"
                     /translation="AEMNIAETRRHQDGQFSTMFNEDEIFFRVATNDTTWGEMAVLRV
                     LGRAEAILSLPGLGFPPESLMVFRKMLQAPFGMILVAGPTGSGKTTTLYAAVDELDRK
                     QLNIMTIEDPVEYDFAGVNQIQVNRAAEITFGSGLRAIMRLDPDIILVGEIRDNETAE
                     TATRAALTGHLVLSSIHANDAPSALFRLTNLGVERYLIASSVIGVVAQRLVRRVCSHC
                     TTEIEPTMEEKLAYREAMDEELKSYASGMGCNFCNHTGFRGRTGLFELLVINDASQQL
                     FLQGASSFELKAEAERQGMTPMRRDGMQKVKEGITTPAEVIRNVFALD"
BASE COUNT          782 a         1452 c         1492 g          809 t
ORIGIN      
        1 ccggatgggc ctgtcccgag cggagccgag gggctcggcc atgggtgggg tccctaagct
       61 ggctgcgttg gtcgtgaaca tgcgtcccgt ttccccggcg gctagttgat gtcccagatc
      121 agcacgttga tcgtgctgcc ggtgatccgg atccgggcat cgatcgtgaa atcgccggcc
      181 gtgctggtga ggtcgaactc gggtggagtg atctcgaatc gccagaagtt ctgctgccca
      241 ttcccgcgca gggcgtagat cgtatcgctg ccgacgtaaa ccatcgcccc gccgaagtcc
      301 accgtggctg gtgcggcggc caccggaatc cacacatccc gcgagagctg gtatcgccac
      361 gcagtcgttg tggtgttgcc ccgcagtgca aagagataat ccgaagcagc ccaggtcagc
      421 gcgccgccgg cattcacgga cgccagcgtg ttcgccaggt tggcccagct atcgccggcg
      481 atgctgtagc gccagaaggc cgtctggttc acgccgcgga aggtgtaaat cgagtcgccg
      541 cctgtgaagg ccagcgcccc acctggtccc acattggcag gggcattggc caaggtcgac
      601 cagctgttgc cggagatgct gtaacgccag aacgcccggt tgttgtttcc tcgcagcgcg
      661 tagaggtcgt tgccgccggt atagaccagc gacccaccgt cgtcgacccg ggccggagcg
      721 gcggcacggg ttacccacgt gttccccgag atgctgtagc gccagaaggt ggtctgattg
      781 cccccacgaa gtgcgtacag gaaatcgccc ccggcatatg ccaacgatcc acccggcccg
      841 atcgcggccg gggtgctggc caggctggtc cagttattgc tggagatgct gtagcggcgg
      901 aaaccgttcg tgcttcctcc ggccagggca tagatatagt cggccccgtt ccaggccagg
      961 tcgccgccgg ctccgatgcc ggccggggaa ttcgccatcg cggtccagat gccgatcggg
     1021 atcgcggtgg cgctggtgga ggtcgtgatc ccgttgatcg tgaccgccgg ggaaaggcta
     1081 atcggggtgc cgggggcgac gtccaccgag tcgcggtaag tctgatcgtt ttgcagctcc
     1141 cagatcgcga actcgaggct ggcgtcggcc gagtattgct cgagcagctc ctcctgtgac
     1201 tcgcgcccgg ccagcaggct ggtgctcaac tgtccgagga agggagccat caccaccgcg
     1261 ccaacggcca gggcccagag ggtggcgggc agagtcccgc ccagctcggc cttcatttca
     1321 ctcgcatccc gagcttgaga gtggtgctct cggaagtcgg cccgacggtg gaggtgatcg
     1381 acaccgtcaa caaactgccg ctcaggctga aggccacatt gccctggctt gcgatccgcc
     1441 gggcgatctg caaggtcgag gtcggtgacc cggagaccac gacctcccga actagggcgg
     1501 tgttcgcggc ggaataagag tagcgatatt gaatggttgg atcgctggtg gtcagggtcc
     1561 catacacggt tccactgcct gccgcaaagc tctgggcttc gctggcatcc cggccaaccc
     1621 agagcgaggc gctttccaga tcgctcagcg ccgccagccg ggcattgccg ccgcgggcga
     1681 cgacgaagac ctcgtaagtg gcggtcgcga tcagccccgc cgccgaggcg accagcaccg
     1741 tcgcgatcag catctcaggg atggtgaacc cgcgttcgtc ggctcgcacc ctcatcggtt
     1801 caccacgtag ccttcgagcg ccaggatctg cccctcggcg tccgacacgc tcaccgtcac
     1861 ccgctgcagg ccgtcattgc ggacggtgct ggtgaacggg ccgctcggag cggtccagta
     1921 ctccaccccc acattgaccg tgtagccgct caccggcgcg accgttggat acggcaccgc
     1981 ggtcggatcg gcgttgtagc tgccgtccag caccagctcc atctgcgaac gggccagggt
     2041 ggttgcattg acccgagcgt ggcggacctt ggtgccgacg ctggcggtgt agatcccaac
     2101 gaccaccaaa ccgaccgaga gcgccaacat cgcgatcgac atcagctcct cgggcaggga
     2161 gattccgcgc tggtcccggt ggaatcgagt ggcaaatgcc ctcagcagcc cttttcgggt
     2221 gatcctgctg gcggtccttg tctggcggat ggggtgcgtc atggaatccc tgcctggacc
     2281 gcgcccagca ggttgtacat cggcatcatg attgagacgg ccacaaagcc gaccaccaat
     2341 ccgaccacga taattagggc cggctccagt acggtggtca tcacccgcaa tgagcgatcg
     2401 acctcctgct cgtagaagtc ggccacggtc gccaggtggg tgtcgagggt cccggtttct
     2461 tcgcccaccc gggccaggta agacatcatc ggaggaaact gcttcactcg gctcaatggc
     2521 tcggagagac cgcggcccag cagtgtctcc tggcgcacgt tctccagcgc ctcctgaaga
     2581 atgagattgc cgatggtctc cttgctgagg gcgagggcct ccggcagggc cagcccggcc
     2641 ttgatcaagg ccgacagggt gcgggagagc cgggcgaccg agccatggat gctgatcttg
     2701 ccgagcagcg gcaagcggag catgagccgg tgcaggagca ggcgcccgga gggtcgccgt
     2761 gagaacagaa agagggccac gctgagtacg gccgctccga tcagcagggt cagaccatac
     2821 tctccgaaga agttagtgat tgcgatcagg aagcgggtcg gccagggcag ctcggcgctg
     2881 aattcttcga acagccggac cattggcgga agcgccacct tgaccaggat ggccaccaca
     2941 aagactgcca gggtcagcac gaacaagggg taggccatgg cgccccgcac cttggccagg
     3001 gtgatctgga tccgttcttc gtagtcggcc agttggcgca gcgccggacc caggttgccg
     3061 ctgcgctcgc cggtctcgat catccggcag tacagctcgg agaacgccac cgggtgcttg
     3121 gccatcgcgg ccgagagcga ggtccccatg tggatctcgt cctcgatctc gccgagcact
     3181 cggcgcaggt atttgttgcc gatctgggtg ccgagcagct gcaggccggc ggtgagcgct
     3241 actccggaat cgaccagggt ggcgagctgc cgcgagaata gaatcacgtc tttcggccgc
     3301 gggcccagca ggctggggaa atacttggcc aggtcgacct ggcggcgcac ccggctgaga
     3361 tcgaggatgg tgagctcgcg ctgccagagc gtgcgctcgg cggcctcttc gctggccacg
     3421 tcgaggaccc cgcggctctc cttcccatcg ttgccgaccg ctaagtaccg gtaagccatc
     3481 ccgcctaccc tctccctttc gcaatctcgc tcacagtgat tccacttatg tcgagtacaa
     3541 gctggcgcct gtctcgaagt tcaatccaat gcgaacacgt tgcggatcac ttcggccggg
     3601 gtggtgatcc cttccttaac tttctgcatg ccgtcccgcc gcataggggt cattccttgc
     3661 cgctcggcct cggccttgag ttcaaaagaa ctggcgccct gcaggaagag ctgctgagag
     3721 gcgtcattga tcaccagcag ctcgaacagg ccggtgcggc cccggaaccc ggtgtggttg
     3781 cagaagttgc agcccatccc gctggcgtag ctcttcagct cctcgtccat cgcctcacgg
     3841 taggcgagct tctcttccat cgttggctcg atctccgtgg tgcagtggct gcagacccgc
     3901 cgcaccagcc gctgggccac caccccgatg accgaggaag cgatcaggta gcgctcgacg
     3961 cccaggttgg tcagccggaa cagtgcgctg ggtgcgtcgt tggcgtggat ggaagagagc
     4021 accaggtggc cggtgagcgc cgcccgggtg gcggtctcgg cggtctcgtt gtcgcggatc
     4081 tcacccacca ggatgatgtc gggatccagc cgcatgatgg cccgcaggcc cgagccgaag
     4141 gtaatctcgg cggcccggtt gacctggatc tggttgacgc cggcgaagtc gtactcgacc
     4201 gggtcctcga tggtcatgat gttcagctgt ttgcgatcga gctcgtcgac tgccgcgtag
     4261 agagtggtgg tcttgccgga gccggtcggg ccagcgacca ggatcatccc gaagggggcc
     4321 tggagcatct tgcggaacac catcagcgat tcgggcggaa agcccagccc cggcaaactg
     4381 aggatggcct cggcccgccc gagcacccgc agcacggcca tctcgcccca ggtcgtatcg
     4441 ttggtggcga cccggaagaa gatttcgtcc tcgttgaaca tcgtcgagaa ctggccgtcc
     4501 tgatggcggc gggtctcggc gatattcatt tccgc
//
LOCUS       DASWKS010000083         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_34994, whole genome shotgun sequence.
ACCESSION   DASWKS010000083 DASWKS010000000
VERSION     DASWKS010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34994"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VGA78_02730"
     CDS             <1..663
                     /locus_tag="VGA78_02730"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9892805.1"
                     /translation="ELTRAIEQAALDSAARIVVLRGAGKDFCAGLDLDEFYRSADAAD
                     SEHRREADQLAGLLGALLRLPQPSLSLVQGKAMGIGATLAVACDLVIASDSAVFAFPE
                     VTYGFVPAFAAAIVPRLIGERAAFELLVTGRLVRGEEARGLGLASRLVPEEGFEAVTG
                     SVVRGLCTCAVDTLAAVKGAFRAVEGKPLTEALNLSAAINARARASAAFKDAAHQFFS
                     MA"
     gene            660..839
                     /locus_tag="VGA78_02735"
     CDS             660..839
                     /locus_tag="VGA78_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892806.1"
                     /translation="MNRLKQILGLAGIIVALAGLAHDSGVLIWTAIGLLGVSVLLRAV
                     LKVRARRAESEPPSE"
     gene            882..>1816
                     /locus_tag="VGA78_02740"
     CDS             882..>1816
                     /locus_tag="VGA78_02740"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HEX9892807.1"
                     /translation="MDTATAVDLPSALALARAALDRHFGYPDFRPAQRRVVTSVLAGR
                     DVLGVLPTGAGKSVCFQIPALLRSGVTVVVSPLISLMQDQVDAARRRGIPASFINSSL
                     DRAAQAGVLQAVTLGHCRLLYVAPERLPRLTADLTERQVRPALFAIDEAHCISEWGHD
                     FRPAYRALGRAREVLGWPQVVALTGSATPEVREDIMATLRFGRQRRFDMHLASFDRPN
                     LRLEVARVRDDRRRVARLCGELQQENGCAIVYASTRNTTEAIARLLWYRGIRAVPYHA
                     GLTTLRRAETLQRFLDGDARVTVATCAFGMGIDKP"
BASE COUNT          233 a          622 c          643 g          318 t
ORIGIN      
        1 gagctcaccc gggcgatcga gcaggcagcg ctcgactccg ccgctcgcat cgtggtgctg
       61 cgcggggccg gcaaggactt ctgcgccggc ctcgatctgg acgagttcta ccgctccgcc
      121 gacgcggccg actcggagca ccggcgcgag gccgatcagc tggcggggtt gctgggggcg
      181 ctcctccgtc tgccccagcc gagcctctcc ctggtgcagg gcaaggcgat gggaattggg
      241 gccacactgg ctgtggcctg cgatctggtc atcgcctccg attccgccgt cttcgcgttt
      301 cccgaagtga cctacggttt cgtgccagcc tttgccgcgg ccattgtccc ccggctgatc
      361 ggggagcgcg ccgccttcga gctgctggtt acgggccggc tggtgcgggg agaagaagcc
      421 cgcgggctcg gactggcctc gcgactggtg ccggaagaag gtttcgaggc ggtgaccggg
      481 tcggtggtgc ggggtctttg cacctgtgcg gtcgacacgc tcgcggccgt gaaaggcgcg
      541 tttcgggcgg tggaggggaa gcccctgacc gaagccttga atctgagcgc cgccatcaat
      601 gcccgggctc gcgcctccgc cgccttcaag gacgcggccc accaattctt ttccatggcg
      661 tgaaccgcct caagcagatc ctcggtctgg ccggcatcat cgtagccctg gccggcctgg
      721 cgcacgacag cggtgtgttg atctggaccg cgatcggcct gctgggggtg tcagtcctgc
      781 tccgggccgt tctcaaggtc cgggcccgtc gcgcggaatc ggagcccccg agcgagtagc
      841 cgcggtacca cgaacttccg gtgcggtgcc agcttggtgg ggtggatacc gcgacggccg
      901 tcgatcttcc ctccgcacta gccctggccc gggccgcgct cgaccggcac ttcggctatc
      961 ccgacttccg tcccgcccaa cggcgggtgg tcacgtcggt gctggccggg cgggacgtgt
     1021 tgggcgtgct acccaccgga gcggggaaat cggtctgctt ccagatcccc gccctgctcc
     1081 ggtcgggggt caccgtggtc gtgtcgccgc tcatttcgct gatgcaggac caggtcgacg
     1141 ccgcccgccg gcggggcatc ccggcgtcct tcatcaacag ttccctggat cgtgcggccc
     1201 aggctggcgt gctccaggcc gtcacgctgg gtcactgccg gctgctgtac gtggcgccgg
     1261 aacggctgcc ccggctcacc gccgacctga ccgagcggca ggtcaggccc gcgctgttcg
     1321 ccatcgatga agcccattgc atctcggaat gggggcatga ctttcggccc gcctaccggg
     1381 cgctgggtcg ggcgcgggag gtgttgggat ggccccaggt ggtcgcgctg accgggagcg
     1441 ccacgcccga ggtccgggag gacatcatgg ccacgctgcg tttcggccga cagcggcggt
     1501 tcgatatgca cctggccagc ttcgaccggc cgaacctgcg tctcgaagtg gcccgggttc
     1561 gggacgaccg ccgtcgggtg gcccggctgt gcggagagct gcagcaggag aacggctgcg
     1621 ccatcgttta cgcttccacc cgcaatacca ccgaagccat cgcgcggctg ctgtggtatc
     1681 gcggtatccg ggcggttccc taccacgccg gtctcaccac gcttcgccgg gccgaaaccc
     1741 tgcagcggtt cctcgatggg gatgcccggg tcacggttgc gacctgtgcc ttcggcatgg
     1801 ggatcgacaa gccgga
//
LOCUS       DASWKS010000084         3271 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_780462, whole genome shotgun sequence.
ACCESSION   DASWKS010000084 DASWKS010000000
VERSION     DASWKS010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780462"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VGA78_02745"
     CDS             complement(<1..185)
                     /locus_tag="VGA78_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892808.1"
                     /translation="MREASATDSRACFDLFVESVCDLGDRLGVETITGGVEAIDTLWP
                     KRQPLFDHLAATADRWWL"
     gene            complement(252..>3271)
                     /locus_tag="VGA78_02750"
     CDS             complement(252..>3271)
                     /locus_tag="VGA78_02750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892809.1"
                     /translation="GSYSVGALAIDPTDPLTVWVGTGENNSQRSVGYGDGVYKSVDGG
                     RTWQNTGLKASGNIGRIAIDPRNSAVVYVAAQGPLWSGGGERGVYQTSDGGKTWKQIL
                     KGDNDWTGANEVHLDPRNPDVIYAVLWQRFRRQWGFINGGPGSGIHKSTDGGQTWRKL
                     SSGLPTEELGKIGLAVSPADPNTLYAVIEAANRGGGLFRSTNAGSSWRRMSSYNAGPP
                     FYYHELIPDPAEVQRVYSIDVRLQVSADSGRSFTGLNTRRVHVDYHALWIDPGDTRHL
                     ITGNDGGLYQSFDRGASWRYAGNLPITQFYKLALDNASPFYHVYGGTQDNNTIGGPSR
                     TRASRGIANEDWYIVVGGDGFQPRVDPENPDIIYGQSQYGELSRLDRRTGERVNIQPQ
                     PGAGEAPLRWHWDSPLIVSPHAGSRIYFASQRLFRSDDRGDTWQPVSADLTRNLDRNT
                     LRMMGRVWSVDAVAKNTSTSFFGHIVALAESPRRQGLIWVGTDDGLIQVTEDGGQTWR
                     RIESVAGVPDTTYVSDLEPSRHAEGTVYATFNNHKAGDFKPYVMKSTDLGRTWTSITG
                     DLPARGSVWTIVEDPVRPELLFAGTEFGAFFTVDGGKKWVQFRGGLPTIPVRDIAIQE
                     REGDLVLATFGRGFYVLDDYTPLRRLTPELIAAGATLLPVRPAPMFVPSNLSAGGQGD
                     AFYTAPNPPAGATFTYYLGQSLRTRRQRRQEAERSAARRNEDITVPSWDTLRVEEQEE
                     APAIVLTISDEAGNVVRRLTGPSAQGFHRVSWDLRHAAMNPVLALRRDEDQDPGDFGG
                     GFGGGATGPLTVPGTFRVQLAKRVDGVLTPLGEPQTFKAEPLMEPTLGNPDRAARLAF
                     QQRTAKLQRAVLGSVQVTGETLTRLGLLRAALDQTSTADAAVRQEVATLEGRLRELQT
                     ELSGDRVIESRSEPAAPGIQDRVQNIVSGSWSYSGAPTTTHQRDYEIAAAAFATWLPR
                     LRQLIEVDLKRLYDRAETAGAPWTPGRVPVWTP"
BASE COUNT          475 a         1117 c         1118 g          561 t
ORIGIN      
        1 agccaccacc ggtccgcggt ggcagcgagg tgatcgaaca gcggttgccg cttgggccag
       61 agcgtgtcga tcgcctcgac cccaccggtg atggtctcca ccccgagccg atcgcccaga
      121 tcgcagaccg attcgacaaa gagatcgaag caggctcgcg aatcagtcgc ggaagcctcg
      181 cgcattgtgt agttcactgt ccgcctgtcc gcctgtccgc ctgtccgtcc gtcggtccgt
      241 cggtccgtcg gtcagggcgt ccaaaccggc acccgtccgg gggtccaggg cgcgccagct
      301 gtctcggccc ggtcgtacaa tcgcttgaga tccacttcga tcagctgccg cagccgaggc
      361 agccaggtcg cgaacgccgc ggcggcgatc tcgtaatccc gctggtgggt ggtcgtaggt
      421 gccccggagt acgaccagct gccggacacg atgttctgga cccggtcctg gatgccgggc
      481 gcggccggct cgctccgcga ttcgatgacc cgatcgccgc tgagctcggt ctgcagctcc
      541 cgcaggcggc cttccagggt ggcgacctcc tgccgcacgg cggcatcggc cgtcgaggtc
      601 tggtccaggg ccgcacgcag cagtcccagc cgggtcaggg tctcgccggt cacctgaacc
      661 gagcccagca cggcccgctg cagtttggcg gtgcgctgct ggaaggccag ccgggccgcc
      721 cggtcggggt tgcctaacgt cggctccatc agcggttcgg ctttgaaggt ctgcggctcc
      781 cccaggggcg tgaggacccc gtcgacccgc ttggccagct ggacccggaa agtccccggc
      841 accgtgagcg gcccggtggc ccccccgccg aagcccccgc cgaagtcccc ggggtcctgg
      901 tcctcgtcgc gccggagcgc cagcaccgga ttcatcgcgg catggcgcag gtcccagctc
      961 acccggtgaa aaccctgggc cgacggcccg gtgagccgcc ggaccacatt gcctgcctca
     1021 tcgctgatgg tgaggactat ggcgggcgct tcttcctgct cctccacccg cagggtatcc
     1081 cagctgggca cggttatgtc ctcgttgcgg cgggcggccg agcgctccgc ctcttgacgg
     1141 cgctggcgcc gggtccggag cgactgaccc aggtagtaag taaaggtggc gccggccggc
     1201 ggattggggg cggtgtagaa cgcgtcgccc tgtcctcccg cggacagatt gctcggcacg
     1261 aacatgggtg ctggccgaac cggcagcagg gtcgccccgg cggcgatcag ctccggtgtc
     1321 aggcggcgca gcggagtgta gtcgtccagg acgtagaagc cgcggccgaa tgtcgccaac
     1381 accagatcgc cctcgcgttc ctggatcgcg atgtcacgca ccggaatagt gggaagcccg
     1441 ccgcgaaact gcacccactt cttgccgccg tcgacggtga agaaggcgcc gaactcggtg
     1501 ccggcgaaca ggagttccgg ccgcaccggg tcttccacga tggtccagac cgatccccgc
     1561 gcgggaagat cgcccgtgat gctggtccag gttcgcccca ggtcggtgct cttcatgaca
     1621 tagggcttga aatcccccgc cttgtgattg ttgaaggtgg cgtacaccgt gccttccgcg
     1681 tggcgcgacg gttccaggtc cgacacgtag gtggtatcgg gaacgccggc gacgctttcg
     1741 atccggcgcc aggtctgtcc gccgtcctcg gtcacctgga tcagtccatc atcggttccc
     1801 acccagatga gtccttggcg ccggggcgac tcggccagcg ccacgatgtg gccgaagaac
     1861 gacgtgctgg tgttcttcgc cactgcgtcg acgctccaga cccggcccat catcctgagg
     1921 gtgttgcggt cgaggttgcg ggtgaggtcg gcgctgaccg gttgccaggt gtcgccccgg
     1981 tcgtcgctcc ggaacagccg ctgggaggcg aagtagattc gcgatccggc gtgcggcgac
     2041 acgatcaggg gggagtccca gtgccagcgg agcggggcct cgcccgcgcc cggctggggc
     2101 tggatattca cgcgctcccc ggtgcgccgg tccagccggc tcagttcgcc gtactgggac
     2161 tggccgtaaa tgatgtcagg gttctccggg tccacccggg gctggaagcc atccccaccg
     2221 accacgatgt accagtcctc gttggcgatg ccgcgggagg cgcgggtgcg ggacggaccg
     2281 ccgatcgtgt tgttgtcctg ggttccgccg tacacgtggt agaacggcga ggcgttgtcg
     2341 agcgccagct tgtaaaactg ggtgatcggc agattgccgg cataacgcca cgaggcaccc
     2401 cggtcgaagc tctggtagag tccgccgtcg ttgccggtga tgagatgacg ggtgtcgccc
     2461 ggatcgatcc agagcgcgtg atagtccacg tgcacccggc gggtgttgag accggtgaag
     2521 ctgcgcccgc tgtcggcgga tacctgcagc ctgacatcga tggaatacac ccgctggact
     2581 tccgccgggt cgggaatcag ctcgtggtag tagaagggcg gccccgcgtt gtagctgctc
     2641 atgcggcgcc agctggagcc tgcgttggtg gagcggaaca gcccgccccc gcggttggcg
     2701 gcctcgatca cggcgtacag cgtgttgggg tccgccggtg agaccgccag gccgatcttg
     2761 cccagctctt cggtgggcaa tccgctgctc agcttgcgcc aggtctggcc gccgtcggtg
     2821 gacttgtgaa tccccgatcc gggcccgccg ttgataaagc cccactgccg ccggaaccgc
     2881 tgccacagga ccgcatagat cacgtcggga ttgcgcggat ccagatggac ctcgttggcc
     2941 ccggtccagt cgttgtcgcc cttgagaatc tgcttccagg tcttcccgcc gtcgctggtc
     3001 tggtacaccc cccgctcgcc gccgccggac cagagcggcc cctgcgccgc cacgtagacc
     3061 acggcggagt tgcgcggatc gatcgcgatc cgcccgatgt ttcccgacgc cttgaggccg
     3121 gtattctgcc aggtccggcc gccatcgacc gacttgtaca cgccgtcgcc gtagccgacg
     3181 ctgcgctggc tgttgttctc gccggtcccg acccacacgg tgagaggatc ggtcgggtcg
     3241 atggcgagcg cgcccaccga gtacgatccc t
//
LOCUS       DASWKS010000085         2892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_780648, whole genome shotgun sequence.
ACCESSION   DASWKS010000085 DASWKS010000000
VERSION     DASWKS010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780648"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1031
                     /locus_tag="VGA78_02755"
     CDS             <1..1031
                     /locus_tag="VGA78_02755"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEX9892810.1"
                     /translation="AQSGGARLYVTNQDDATISVIDVGTRALVETIDLQKMGFSANAK
                     PHHAQVEPDGRFWYVTLIGAGKVLKLDRDNQIVGSVDMEVPGLLALHPSQDLLVVARS
                     MSAVNPPKRMALIRRSDMKLLDDVDVFFPRPHAIAVHPAGKYAYVASLGVNQLASVRL
                     EDGQLTLIDVEGPQHTFTQFSLSPDGKWLVLTASQSHQLMIFDLADPARPALARTIPQ
                     EKGPFETAFSWDGRWLVTTNLDANAVTILDAQRWEPVQVIRHERFAQPHGVVFSPDGG
                     WVFVSNRHQSGGAHDHEGGKATGGGVVAAICLRTREVGKLIGVGHYAAGMGIAAPARP
                     PATPAACR"
     gene            1022..2860
                     /locus_tag="VGA78_02760"
     CDS             1022..2860
                     /locus_tag="VGA78_02760"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HEX9892811.1"
                     /translation="MSLKGRAAQVGMIGCAACGGGAPSAAPAPEAEVTARWEAVVSPF
                     PVVDSAGRMLDLAFLGGLNLPRPQLADLDGDGDLDLTIQEYTGRMLALTREGDGPDGL
                     PHWTLSSWRYGGLDVGEWSRLVDLNGDRLPDLFAERPYSYLRFFRNRGTTGQPWLVPV
                     ADSLRDTEGRAIFSDRQNIPQIVDVDCDGRVDLLIGRITGVILHYELVDPQDSIPVFR
                     LVSDRFQDLEIITGQGSMHGANTMAFADPDGDGDLDLFWGDFFEAGLLHFENVGSCAE
                     PHLRKDPVRFPPEDPVVTSGYNAPAFGDLDRDGRLDLIVGVLGGSYDPIRTTIRNLHY
                     YSREAGGGYRRRTAQLLPMIDVGSESLPGFADLDGDGDLDFLLANKIDPVERRTSRIF
                     WYENTGRPGAPAFAMRGALPVTGQYHWAPTFGDLDGDGGSDMLLGSFGASVAWYRLEA
                     GPRPGFTLVDSALVTITRGSNTTPAMGDVDGDGDLDLLVGEASGVLNFYRNDGTPRAP
                     RFVLVSDEFDAIDIGRRSAPLLTDIDGDGDLDLLIGSDDQGVVLYRNRGTRSVPRFER
                     DPSFQLDLPPATAPAAADLDGDGRLELIIGTAGGGALYFRLGAPGR"
BASE COUNT          447 a          976 c          984 g          485 t
ORIGIN      
        1 ccgctcaaag cggcggcgcg cggctgtatg tcaccaatca ggacgatgcc accatctcgg
       61 tgatcgatgt cggcacgcgc gccctggtcg agacgattga cctgcagaaa atgggcttct
      121 cggccaacgc caagccgcac cacgcccagg tggagcccga cggccggttc tggtatgtca
      181 cgctgatcgg cgccggcaag gtgctcaagc tcgaccgcga caaccagatc gtcggttcgg
      241 tggacatgga agtgccgggc ctgctggcgc tgcacccgtc tcaggatctc ctggtcgtgg
      301 cgcgatcgat gagcgcggtg aacccgccca agcgcatggc gctgattcgc cggtccgaca
      361 tgaaactgct cgatgacgtg gacgtattct ttccgcggcc gcacgccatc gcggtgcatc
      421 cggccggcaa gtatgcctac gtcgcgagcc tgggcgtgaa tcagctggcc agcgtgcgac
      481 tcgaggacgg ccagctgacc ctgatcgatg tcgaagggcc gcagcacacc ttcacccagt
      541 tcagcctgtc acccgatggc aagtggctgg tgctgaccgc ctcgcaaagc caccagctga
      601 tgatcttcga tctggccgat ccggccaggc cggcgctggc gcgcaccatt ccccaggaga
      661 aaggtccctt cgagaccgcc ttcagctggg atggtcgctg gctggtcacc accaacctcg
      721 atgccaacgc ggtgactatc ctcgatgccc agcgatggga gccggtccag gtgatccggc
      781 acgagcggtt cgcccagcct cacggcgtcg tgttctcccc cgatggcggc tgggtgttcg
      841 tgagcaaccg gcaccagtcg ggcggggccc acgatcacga gggcggcaag gccaccggcg
      901 gcggcgtggt cgcggcgatc tgtcttcgca ctcgcgaggt ggggaagctc atcggcgtgg
      961 gccactatgc cgccgggatg ggtatcgcgg ccccggctcg gccgccggcc accccggcgg
     1021 catgtcgctg aagggccgag ccgcccaagt cgggatgatc gggtgcgccg cctgcggcgg
     1081 gggggccccg tccgcggcac ccgctcccga ggcggaagtg acggcccggt gggaagcggt
     1141 ggtgagtccc ttcccggtgg tcgatagcgc cggtcggatg ctggacctcg cctttctggg
     1201 cggcctgaac ctccctcgac cccagctggc cgatctcgat ggcgacggtg acctggatct
     1261 cacgatccag gaatacaccg gccgaatgct ggcgctgacg cgggagggtg acgggccgga
     1321 cgggctgccg cactggacgc tctccagctg gcgctacggc gggctcgacg tgggcgaatg
     1381 gtcgcggctg gtggatctga acggtgaccg cctgcccgac ctgtttgccg agcggcccta
     1441 cagctatctc cgtttctttc gaaatcgggg tacgacgggt cagccgtggc tggtgcccgt
     1501 cgccgactcg ctccgcgaca cggaaggccg agccatcttc tccgaccggc agaatatccc
     1561 ccagatcgtc gatgtcgact gcgatgggcg cgtggatctg ctgatcggcc ggatcaccgg
     1621 agtgatcctg cattacgagc tggtagaccc ccaggactcg ataccggtat tccggctggt
     1681 gtccgaccgg ttccaggatc tcgagatcat caccgggcag ggcagtatgc acggggccaa
     1741 caccatggcg ttcgccgacc ccgacggcga cggcgatctg gatctgttct ggggcgattt
     1801 tttcgaagcc gggctgctcc acttcgagaa cgtcggatcg tgcgcagagc cccatctgcg
     1861 gaaggacccg gtgcgtttcc cacccgaaga cccagtggtc accagcgggt acaacgcgcc
     1921 ggcgttcggc gacctggacc gggacgggcg gctcgacctg atcgtggggg tcctgggcgg
     1981 gtcctacgac cccatccgga ccacgatccg caacctgcac tactactcga gagaggccgg
     2041 gggcggctat cggcgccgca ccgcacagct gcttccaatg atcgacgtgg gcagcgagtc
     2101 actgccaggc ttcgccgatc tggatggcga cggcgatctc gacttcctgc tcgccaacaa
     2161 gatcgatccg gtcgagcgcc gcacctcgcg gatcttctgg tacgagaata ccggacggcc
     2221 cggggcgccg gcctttgcca tgcggggggc cctcccggtc accggccagt accactgggc
     2281 gccgacattc ggcgatctgg acggcgatgg cgggagcgac atgctgctgg gctctttcgg
     2341 cgcttctgtc gcgtggtacc ggctggaggc cggcccccgg cccgggttta ccctggtcga
     2401 ttccgcgctg gtgaccatca cccgggggag caataccacg cccgccatgg gggacgtcga
     2461 cggggacggc gatctcgatc tcttggtggg cgaagcctcg ggcgtcctca atttctatcg
     2521 caacgatggc accccgcggg ccccgcgctt cgtcctggtg agcgacgagt tcgacgccat
     2581 cgacatcggg cgtcgcagcg ccccgctgtt gaccgacata gacggggacg gcgacctcga
     2641 cctgctgatc ggttcggacg accagggcgt ggtgctgtac cggaatcggg ggacccgctc
     2701 ggtcccgcgc ttcgagcgag acccgtcctt ccaactcgac ctaccgccag ccaccgcccc
     2761 ggctgccgcc gacctggacg gtgacggccg actggagctc atcatcggga ccgccggggg
     2821 tggcgcattg tacttcaggc tcggcgcccc aggccgctga gaccgtggtt ttcgccgggc
     2881 ctgagcgcgt ct
//
LOCUS       DASWKS010000086        15353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2622614, whole genome shotgun sequence.
ACCESSION   DASWKS010000086 DASWKS010000000
VERSION     DASWKS010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15353
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622614"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VGA78_02765"
     CDS             complement(<1..518)
                     /locus_tag="VGA78_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892812.1"
                     /translation="MPRPPEFKLPRRPDRTWWWAVAASAMVHLLILSVRATDWFWSEG
                     TPPEVRFIPLQPVLPQVDMPSRRPPIPAPEPQRRRRSDLPPPVAREPERPPSDVTEAD
                     RPGVPLAPRDSGGVAVEPPGPDAPRGIPRLRPQLGEGKLWVTPLPLAPQELAQRLTRT
                     HYELVDSAVSEIV"
     gene            complement(502..1698)
                     /locus_tag="VGA78_02770"
     CDS             complement(502..1698)
                     /locus_tag="VGA78_02770"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9892813.1"
                     /translation="MIEPSARVQALPGYPLAEIPSIKRRLIQAGVDVIDLGAGDNEAP
                     PPAPVVEALREAVRDPALSKYGFQQGLLQFRQAVSRYLERRFGLRFDPVSETLPLIGS
                     KEGLAHLPLAVADPGDVCIVPEPGYQAYLGGTLLAACEPHVVPLRQEQRFLLELDEVP
                     PAVLSRAKVAFVNYPNNPTAAVAPRDYLERTVAACRRYGILLGYDNAYCDLTFGGYVA
                     PSIFEIPGARDVAVEFFSLSKTFSMTGWRLGWAVGRPDLIAALTKVKSYVDTGPFLAL
                     QQAAVVALDRAEEFVAPIKATLQERRDACVDSLVGAGFPVRRPEAAMYLWVPLPPGVA
                     SLPFCRRALEEEGVAVLGGAAFGPAGEGYFRIALTAGPARLREAVTRLARALARVREE
                     QLAPAS"
     gene            complement(1695..2318)
                     /locus_tag="VGA78_02775"
     CDS             complement(1695..2318)
                     /locus_tag="VGA78_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9892814.1"
                     /translation="MTGIAPSKIVCVGRNYLAHAREMGNEVPAQPMLFLKPPSALIGP
                     GDAIVIPPESKQVEYEAEIGVVIGQRLRRVIAAVAERGIRGFTCVNDVTARDLQKTDG
                     QWGRAKGFDSFCPAGPSVVNGLDWRRLEVIGRVNGEERQRGKAAEMHFDIPGLLAFIS
                     NAMTLEPGDLVLTGTPAGVGPLRAGDEVEVEIPGVGVLRNPVRAEAA"
     gene            complement(2315..4816)
                     /locus_tag="VGA78_02780"
     CDS             complement(2315..4816)
                     /locus_tag="VGA78_02780"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HEX9892815.1"
                     /translation="MNRISPEVQTELAREIALAGGREVCFVASLDAEGRIVEARAVAR
                     GTADMVLALPGVARTGQMVLHNHPSGELEPSQPDLFVAARLHDGGVGFGIISNSADAL
                     YVVVEVGRPEPVLRIDPFDVVDTLGERGPIAPLLGAYEDRPSQRDMAAHIADAYNDGG
                     VVLLEAGTGVGKSFAYLVPALAWARANRERTIVSTNTINLQEQLVGKDLPVLARALSD
                     DEYRPRWALLKGWRNYLCLSRLEQAMGHQHSLLEPERVQELIGLTEWATRTSDGTLAD
                     LPVTPSHEVWDEVAAEPDLCTRIRCQHFERCFLFRARRRAAEADVVVVNHHLLAADLA
                     VRQASDNWQDAAVLPPYQRLILDEAHHLEDVAAGHLGLQVTSRGVRRLLARFERGGRG
                     LAPALAVELSRGADPLSRSSLDVLQQRLVPGLAHARIAADALFARLFTRLTDIPGGVL
                     RVDETFALDAVWEQGLSAELHEAVLGFRRLRDDVELIVDRLSSGDMSERRQQLLTEMR
                     GVLRRLEGTAEGLTQTLQPAPAGPPMVRWIERADARNRQVALHAVPLDLAPILRETLF
                     DRLRTVVLTSATLAAGGDFSFLEKRTGLAAEPSPVTVRELLPSPFDFGAQCLFGVPSD
                     IPDPRDDELGHDQAVAHVVEELAAASDGGMFVLFTSHGALRRTGSALRAGLGSRWPLL
                     VQGEAPRDQLLRRFRDSGRAILLGTDSFWEGVDVPGRALRALVLCKLPFKVPTEPLTA
                     ARLERLAEQGEDGFWSYLLPNAALKLKQGFGRLIRSRSDVGVVVLLDRRVVVKRYGPM
                     ILEGLPPAERVVGTWAEVRTKCEDFFARFGIGAEV"
     gene            complement(4922..6196)
                     /locus_tag="VGA78_02785"
     CDS             complement(4922..6196)
                     /locus_tag="VGA78_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892816.1"
                     /translation="MKRRTFVAAGAASLMPGLWRMPGSASWLLVPMDEGQADHLKAYG
                     VAFRALERGERGEWFLNWRGGSFLLPATAAASRDATLAGVTVEPVEDGQVAQIRAEIQ
                     SGNADAVPLEKAPKVAVYVPPNTAPWDDAVTMVLNYAGIKYEKIWDEEVIGPRLKDFD
                     WLHLHHEDFTGQYSKFYLNYSGAPWLAEMVDRNQRMARQLGFPNVPALKRGVAKGIAG
                     FVEDGGFLFAMCTATETLDLALASDGTDIAASYADGSPMDPQAGSKMQWDRALAFQDA
                     KLEQNPVAAVFSDIDGHQVNSVGGRQPLGSFSLFSFSAKIDPVATMLVQNHRQAIPDF
                     YGLTTSFTRHTLKPGVTILAEEAEAPWVKYIHGDRGRGTWTFFGGHDPEDPQHQIGDV
                     PTDLSLHPHSPGYRLILNNVLFPAAKKKELKT"
     gene            complement(6193..7908)
                     /locus_tag="VGA78_02790"
     CDS             complement(6193..7908)
                     /locus_tag="VGA78_02790"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9892817.1"
                     /translation="MTGRALCLLLGWAVPAAAQRTPYDRAFELERRGSYVQAAAGYRQ
                     ILTAHPADLNSLLGLERVLHELGRSGDLGPPASAAVAAEPKNPVLFAVAVRAWTAADR
                     ADSVVGLVNRWSAVEPASEAPYREWGFAALARRDRTAARRAYQLGRERLGRPDALAGE
                     IAQLATWEGDYSLAVSEWLLAIRATPGYRGSAVGLLSQIPVDRRAPLLAELDRRAQAP
                     TDQLAASLAARWNEPTSGFERLMRRLPVGAQGVGPLQEFLEEVRSGTGRDASLARART
                     LEALAERQTTQRAKHLAEAARAYSDAGEQNSARRMLAQLSIDPRASPDAAATAGATLV
                     GVLISEGKLEEADRRLADLKQTISLEEHERLTHRLARAWLRDGKTDRAERLVATDSTV
                     EGFALRGRARLYRGDLAGASHDLAAAGPFAAERSDATERAAILAILQVIDRDSLPALG
                     AAFLALERGDSAGAAGGFSAVGAGLPPDRGGAQLFLLAGQLRAGQGAVPEAEQLFVKA
                     ATVASSAAAPAAGLELARIMIRQGRPKDAIAALEQLILEFPQSAVAPQARRLLDTVRG
                     GAPQG"
     gene            complement(7905..11150)
                     /locus_tag="VGA78_02795"
     CDS             complement(7905..11150)
                     /locus_tag="VGA78_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892818.1"
                     /translation="MSRTGEALDRLGRPLRLTSGAGWGLGAVAAMAAVLGLAAWSIRL
                     GLAGPATVTFVAWGGAALSVVLFLWLARRERHRLGPRDLAGAIESAGGARRGALRGQL
                     EAPAAGTSSGLAFVADEVCSARVDSQGGEALHQLSRRLRRRAGWLGLAALAAITALAS
                     ARPARGPVAILWRPGQALQLLRAPVRLRAVPDVVDRGGEVTLLLEAEGQRSATLFSRA
                     PGQPWAQTPVMLDSLGQAERRLEGLASDMYFRLSSGSRGSDTVHVRVRIPAFLGALRV
                     TAWYPDYLGLEDESLPLSGDTLMLPAGTTLDTEGEASTVLTSAVWLGPGRRVTLNPKG
                     RRFAGQFVPLQSGSWTLSLLADDGTPVASDPVRIPLVVVPDSIPVVEVPSPGVDTIAP
                     LDLRIPLLIDARDDHGIVRIDVASRTSGTTPVVESVALSEQSRERALVEFVFDLSARA
                     LHPGDTVRYLVRATDNSPQRQVGESREFIVVVPTESDQRQAQREASGQARQQLDSLVA
                     ASRRLERQSEDLARERIRAEGQGRDQQALGFEEARRAEAVARSQEELLRQADQLRETL
                     EAMEEAARRGEEADTALARRLAEIGEQLDRALTPELRQKLAELQKSLQNLDPQAAREA
                     LKQLAEAQQALREALERARELFRRAALEGELSALADDAKELATEQKKWNQTAAASDSA
                     AAAAAEQKLAAQADTLAGGLERASQQMEEAGARQQMSQTAQQARQAAQQMRNAAASSQ
                     KGQRQQARQQGEQAQSQMEQVERETSEQRDQQQETWRKEVLQALDRALAETATLSRQQ
                     LDVAGGFRRGATLSSARREQATVEESAQKLLEQATALAGKNALVSPQIAVALAVARRE
                     MGLARDAVSSASPNLREAAERAGDAVDALNAAAFQMVRSRDDVSGSSSGSGLAEALER
                     MTQMAQQQGQLSQQAGGLLPMAGSASIQQQLQAMAAHQRSLAREMERMRAEGQIPGAR
                     QLAEEAKELARKLEAHQLDRETVQRQERLFRRMLDAGRTLRGEEEDERKERQSTAAKE
                     GEVRLPPALRRRLGEDGAIRFPTWDELQRLSPEERRMVTEYFRRLASRNGR"
     gene            complement(11147..11806)
                     /locus_tag="VGA78_02800"
     CDS             complement(11147..11806)
                     /locus_tag="VGA78_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEX9892819.1"
                     /translation="MIGRLALIAVMSAAPIAAAEAQLTIGRLHYDGGGDWYANPSSLP
                     NLLKTIGERTTLKVAAREVVVQLREDRLWDLPYLYMTGHGNVRFSDADLEILRRWLRQ
                     GGFLHADDNYGMDESFRREMKRVFPEAELVDVPADHPIYRVVYPFPRGIPKIHEHDGK
                     PAQGLGLFLDGRLAVFYSYETDLGDGWEDPEVHKDPPEKRESALRLGVNLFAYAVGYG
                     S"
     gene            complement(11803..12651)
                     /gene="rsmI"
                     /locus_tag="VGA78_02805"
     CDS             complement(11803..12651)
                     /gene="rsmI"
                     /locus_tag="VGA78_02805"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEX9892820.1"
                     /translation="MTRDSQIATLYVVATPLGNLGDLSPRAAEVLRTVPVVAAEDTRR
                     TRQLLSHLEAHPKLLSFHAHSEPGRLQELASLVERGTDVALVTDAGTPAVSDPGATLV
                     QAVRDRGGDVVPIPGPSAVITALSASGFSADRFIFLGFLPRKGAERERLLRQVAQSEL
                     TVVLFEAPPRLHGLLEDLAREAGEERRAAVARELTKLHEETRVGTLAELAGHYGKTEP
                     RGECTVVVEGSEPPLAPVADSEAARAIASRLLATGVTRREAARQVAVETGLSRNAAYR
                     LVMELP"
     gene            complement(12744..13076)
                     /gene="trxA"
                     /locus_tag="VGA78_02810"
     CDS             complement(12744..13076)
                     /gene="trxA"
                     /locus_tag="VGA78_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX9892821.1"
                     /translation="MADSKNTVPVTDDTFAGVVEKGQGLVLVDFWAEWCGPCRMIAPS
                     LEQLAVQYEGKATIVKMDVDANMRTPMRFNVRSIPTLMFFKDGKHVDTVIGAVPKTTL
                     EAKIQQHL"
     gene            13134..13523
                     /gene="mce"
                     /locus_tag="VGA78_02815"
     CDS             13134..13523
                     /gene="mce"
                     /locus_tag="VGA78_02815"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX9892822.1"
                     /translation="MMPTVAHIGIAVESIDTALAFYRDVLGVVPHRAEEADGARIVSL
                     PFGGPEIELLEPVSPDGPIARFLARHGPGIHHICYRVPDLEAALAACRALGYRLVDET
                     PRSGAGGRRIAFIHPKATAGILLELTE"
     gene            complement(13553..14008)
                     /locus_tag="VGA78_02820"
     CDS             complement(13553..14008)
                     /locus_tag="VGA78_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892823.1"
                     /translation="MRALTVLFLVLLAACGGGSTASVEPDPGPNAALDQFIRAVSDSN
                     LARMAQLWGTSSGSAAETGKPSDYPRRIAIIHAYLRGSKVKVLAEPERSSSRAVLLVE
                     VTRDDCRRQVPFTLTRTGQGQWLVEAIELGVLGSPGRPCAMDDRKPGDR"
     gene            14068..14799
                     /locus_tag="VGA78_02825"
     CDS             14068..14799
                     /locus_tag="VGA78_02825"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX9892824.1"
                     /translation="MRPIRLYINIDHVATVRQARRTDEPSPAAAARLCEAAGAHGITA
                     HLREDRRHIQDDDLLELSESVTTVLNVELATASDITELVCRLRPHQATLVPERREEIT
                     TEGGLDVSRRDPALIDTIQRLRSAAIRVSLFIDPTAAAVEASAQLGVQAVELHTGRYS
                     HTWRESHAALEEVRSAARLARRLGLDAHAGHGLTYLNVQPVAAIEEIEELNIGHSVVS
                     RAVLHGMVEAVTEMGRLIRTARRLP"
     gene            14925..>15353
                     /locus_tag="VGA78_02830"
     CDS             14925..>15353
                     /locus_tag="VGA78_02830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892825.1"
                     /translation="MRLARALRGAAMLAGPASYTRAASQLEHITRLIRDSSLGWAEAL
                     PALREAHAELERLAARASVWDEDGDRAAFALANRLRSLVDSAPPPAAPRPTEQSTQSI
                     RTFVAREAAAVAGAAGEAARAVAGASTPPADRLVRITHSMQ"
BASE COUNT         2408 a         5636 c         4943 g         2366 t
ORIGIN      
        1 acgatctcgc tgaccgcgct gtccaccagc tcgtagtggg tccgggttag ccgttgcgcc
       61 agctcctggg gggccaacgg cagcggcgtc acccagagct tcccttcgcc cagctggggt
      121 cggagccggg ggatgccccg cggcgcgtcg ggacccggag gctcgaccgc gacgccgcca
      181 ctgtcccgcg gcgccagcgg cacccccgga cgatccgcct cggtgacgtc cgagggcggc
      241 cgctccggtt cgcgcgccac cggcggcggc agatcggaac gccgccgccg ttgcggctcc
      301 ggggccggta tgggtgggcg ccgggagggc atgtcgacct gcggcagcac cggctgcaac
      361 gggatgaacc tgacctcggg cggcgtccct tccgaccaga accagtcggt cgcccggacc
      421 gagaggatca ggaggtgcac catcgcgctg gcggcgacgg cccaccacca ggtccggtcg
      481 ggccggcgcg gcaacttgaa ttcaggaggc cggggcaagt tgctcctcgc gaaccctcgc
      541 cagggcccgg gccagtcgag tcaccgcttc gcgcaggcgc gccggccccg cggtgagggc
      601 gatccggaaa tacccctcgc ccgccgggcc gaacgccgca ccgcctaaca ccgccacccc
      661 ctcctcctcc agagcccgcc ggcagaacgg cagtgacgcc accccgggcg ggagcgggac
      721 ccagagatac atggcggcct ccggccgccg aaccgggaac ccggcgccca ccaggctatc
      781 gacacatgca tcccgccgct cctggagcgt ggccttgatc ggcgcgacga attcctcggc
      841 tcgatccagc gccacgaccg cggcttgctg cagtgccaga aaggggccgg tgtccacgta
      901 ggacttcacc ttcgtcaacg ccgcgatcag gtccggccga cccacggccc agccgagtcg
      961 ccacccggtc atcgagaatg tcttcgacag cgagaagaac tccaccgcca cgtcacgggc
     1021 ccccgggatt tcgaagatgc tgggcgccac gtagccgccg aaagtgaggt cgcagtacgc
     1081 gttgtcgtag ccgagcagga tcccgtaccg ccggcaggcc gccaccgttc gctccaggta
     1141 gtcccgcggg gccacggctg cagtgggatt gttgggatag ttgacgaatg ccaccttggc
     1201 ccggctgagg accgcggggg ggacctcgtc cagctccagc agaaaccgtt gctcctgccg
     1261 gagcggcacc acgtgcggct cgcaggccgc gagcagtgtc ccgcccaggt aggcctggta
     1321 gcccggctcg gggacgatgc acacatcgcc cgggtcggcc accgccagcg ggagatgcgc
     1381 caggccttcc ttcgatccga tcaagggcag cgtctcactg accggatcga accgaaggcc
     1441 gaaccgtcgc tccaggtagc gcgagacggc ctgccggaac tggaggagac cctgctggaa
     1501 gccgtacttg ctcagggcgg gatcgcgtac cgcctcgcgc agcgcctcca ccaccggcgc
     1561 cggaggcggg gcttcgttgt ctcccgcgcc caggtcgatc acgtccacgc cggcctggat
     1621 cagccgccgc ttgatggacg ggatctcggc cagcgggtat ccgggcaggg cctggacccg
     1681 cgcgctgggt tcgatcatgc cgcctccgcc ctcaccggat tccgcagcac cccgacgccg
     1741 ggaatctcca cctcgacctc gtcccccgca cggagcgggc cgacgccggc gggagtgccg
     1801 gtgagcacca gatcgcccgg ctccagggtc atcgcgttgc tgatgaaggc gagcagcccc
     1861 ggaatgtcga agtgcatctc ggccgccttg ccgcgctgtc gctcctcacc gttcacccgt
     1921 cctatgacct cgagccgccg ccagtccagc ccgttcacca ccgacggacc ggccggacag
     1981 aagctgtcga accccttcgc ccgaccccat tggccgtccg ttttctggag atcgcgggcc
     2041 gtcacatcat tgacacaggt gaaaccccgg attccccttt cggcgaccgc ggctatcacc
     2101 cggcggagtc gctgcccgat caccacgccg atttccgctt cgtactcgac ctgcttcgac
     2161 tcgggtggaa tgacgatcgc atcgccggga ccgatcaggg cactgggcgg cttgagaaac
     2221 aacattggct gcgccgggac ctcattgccc atctcccgcg catgcgccag gtagttgcgg
     2281 cctacgcaca cgatcttgct cggcgcgatc cccgtcatac ttccgctcca atgccaaagc
     2341 gcgcgaagaa atcctcacac ttggtgcgta cctcggccca ggtacccacc acccgttcgg
     2401 ccggcggcag tccctccagg atcatgggcc cgtaacgctt taccaccacc cgccggtcaa
     2461 gcagaaccac caccccgacg tccgagcggc tcctgatcag tcgcccgaat ccctgcttga
     2521 gcttcagggc tgcgttgggg aggaggtagc tccagaaccc gtcctccccc tgctccgcca
     2581 gccgttccag ccgcgccgca gtcagcggct cggtcggaac cttgaaaggt agcttgcaga
     2641 gaaccagggc gcggagcgcc cgcccaggca catcgacccc ttcccagaag gagtcggtgc
     2701 ctagcagaat cgcccgtccg ctgtcgcgaa atcggcgcaa caactggtcc cggggcgctt
     2761 cgccctgcac cagcaacggc cagcgcgagc ccagcccggc ccggagcgcg ctcccggtcc
     2821 gccgtaacgc gccgtgggac gtgaacagca caaacatgcc cccgtccgac gcagcggcca
     2881 gctcctccac tacatgcgcc accgcctggt cgtgccccag ctcgtcatcc cgcgggtccg
     2941 gaatatcgct cggcacaccg aacaggcact gggccccgaa atcgaagggt gacgggagca
     3001 gctcccgcac cgtcaccggg gacggctccg ccgccagccc ggtccgcttt tcgaggaacg
     3061 agaaatcgcc gccggccgcg agcgtcgcgc tggtgagcac cacggtccgc aaccggtcga
     3121 agagggtttc gcgcagaatc ggagccaggt cgagtgggac ggcgtgcagg gccacctgtc
     3181 gattgcgcgc atcggctcgc tcgatccacc gcaccatcgg gggcccggcc ggcgcgggct
     3241 gcagggtctg ggtcagccct tcggccgtgc cttccagccg gcgcagcacc ccgcgcattt
     3301 cggtgaggag ttgctgccgc cgctccgaca tgtcgcccga gctcagccga tccacgatca
     3361 attcgacgtc gtcgcgcaat cgccggaacc ccagcaccgc ctcatgcagc tcggccgaga
     3421 gaccctgttc ccacaccgcg tccagggcga aggtttcgtc gacccgcagc acccctcccg
     3481 gaatgtccgt gaggcgggtg aacagtcgcg cgaagagcgc atcggccgcg atgcgggcgt
     3541 gggccagtcc cggcaccagc cgttgctgca gcacgtcgag gctcgaccgg gagagcgggt
     3601 cggcgccccg ggacagctcc actgccagcg ccggcgccaa tccccggccg ccccgttcga
     3661 agcgcgccag caaccgccgg acgccccggc tggtgacctg cagaccgagg tgccccgccg
     3721 ccacgtcctc caggtggtgc gcctcatcca gaatcaaccg ttgatatggc ggcaggaccg
     3781 cggcgtcctg ccagttatcc gaggcctgcc tcaccgccag gtccgcggcc agcagatgat
     3841 gattgacgac caccacgtcg gcctcggccg cgcggcgccg ggcccggaac aggaagcagc
     3901 gttcgaaatg ctggcaacgg atccgggtgc acaggtccgg ctccgccgct acctcatccc
     3961 acacctcgtg cgacggcgtc accggcagat ccgccagggt gccgtcgctg gtccgcgtgg
     4021 cccattcggt caggccgatc agctcctgca cccgctccgg ttccagcaac gagtgctgat
     4081 gccccatcgc ctgctccagc cgggagaggc agaggtaatt gcgccatccc ttgagcaggg
     4141 cccagcgggg ccggtactcg tcgtcactca gtgcccgcgc cagcaccggc aggtctttcc
     4201 caaccagctg ctcctgcaag ttgatggtgt tggtactgac gatggtgcgc tcccggttgg
     4261 cccgggccca cgccagtgcc ggcaccaggt aggcgaatga cttgccgact ccggtgccgg
     4321 cctcgagcag caccacgccc ccgtcgttgt aggcgtccgc gatgtgggcg gccatgtcgc
     4381 gctgactggg ccggtcttca taggcaccga ggaggggcgc gatcggcccc cgttccccca
     4441 gggtgtcgac cacatcaaag gggtcgatcc tgagcaccgg ctcgggccgc cctacttcca
     4501 ccactacata caaggcatcg gcgctgttgg agatgatgcc gaacccgacc ccgccgtcgt
     4561 gcagccgggc cgcgacgaag agatcgggtt gggagggctc cagctcaccc gagggatggt
     4621 tgtgcagcac catctggccg gtccgggcca cgccgggaag cgcgagcacc atgtcggcgg
     4681 tcccgcgcgc cacggcgcgc gcttccacga tgcgcccctc cgcgtccagg gacgcgacga
     4741 aacacacctc gcgtccgccg gcgagggcga tctcgcgggc cagctcagtc tggacttcgg
     4801 gggaaatgcg gttcatggcg cgcgattgac cattgacgat tgacaattga caacttctca
     4861 ggccggcctc gatccccgaa atgagtaccg caattgtcaa tcgtcaactg tcaatcgtga
     4921 atcaggtttt cagttccttc ttcttggccg cgggaaacaa cacattgttg agaatgagcc
     4981 ggtatcccgg cgagtgcggg tgcagggaaa gatcggtggg cacatccccg atctggtgct
     5041 gcgggtcctc cggatcgtgc cccccgaaga aggtccaggt gccgcggccc cggtcgccgt
     5101 ggatgtactt gacccagggc gcttcggcct cttcggccag aatggtgacg ccgggcttga
     5161 gggtgtggcg ggtgaacgag gtggttaatc cgtagaagtc gggaatggcc tggcgatggt
     5221 tctgcaccag catcgtggcg accggatcga tcttggccga gaagctgaac agcgagaagc
     5281 tgcccagcgg ctggcggccg ccgaccgagt tcacctggtg gccgtcgatg tcggaaaaga
     5341 ccgcggccac cggattctgc tccagcttgg cgtcctgaaa cgccagcgcc cggtcccact
     5401 gcattttgct cccggcctgc gggtccatcg gggacccgtc ggcgtagctg gccgcgatgt
     5461 cggttccgtc gctggccagc gccaggtcca gtgtctccgt cgcggtgcac atggcgaaga
     5521 ggaagccgcc gtcctccacg aaccccgcga tgcccttcgc cacgccccgc ttgagggccg
     5581 ggacgttggg aaaccccagc tggcgcgcca tccgctggtt acgatccacc atctcagcca
     5641 gccagggcgc gccggagtag ttgagataga acttggagta ctgcccggtg aaatcttcgt
     5701 ggtgcagatg gagccagtcg aaatccttga gccggggacc gatgacctcc tcgtcccaga
     5761 tcttctcgta cttgatgccc gcgtagttga gcaccatggt gaccgcgtcg tcccagggcg
     5821 cggtattggg cggaacgtag accgccacct tgggggcctt ctctagcggc accgcatcgg
     5881 cgttgccact ctgaatctca gcccggatct gcgctacctg cccgtcctcc accggctcga
     5941 ccgtcacgcc cgccagagtc gcatcgcgcg acgcggccgc cgtggccggg agaagaaacg
     6001 atccgccacg ccagttgagg aaccattcgc ctcgttcacc ccgctccagg gcgcggaagg
     6061 ccaccccgta tgccttgaga tgatcggcct ggccttcgtc catcggcacc agcagccagc
     6121 tcgcgcttcc cggcatccgc caaagcccgg gcatcagcga ggcggcaccg gccgccacga
     6181 aggtgcgtcg tttcatccct gaggggctcc gccccgaacc gtatcgagca gtcgccgcgc
     6241 ctgcggcgcc acggcgctct gaggaaactc cagaatcagc tgttccagcg ccgcgatcgc
     6301 gtccttgggc cgaccctgcc ggatcatgat gcgcgccagc tccaggccgg ccgcgggagc
     6361 cgccgcgctg ctggcgacgg tggccgcttt gacgaagagc tgctcggcct cgggcaccgc
     6421 gccttggccg gcgcgcaatt gccccgccag cagaaacagc tgggctccgc cccggtcggg
     6481 tggcagaccg gcgccgaccg cggaaaaccc gccggcggcg ccggcggaat cgccccgttc
     6541 caacgccagg aaggccgccc cgagcgccgg cagcgaatcg cggtcgatga cctgcaggat
     6601 ggccagaatg gccgcgcgtt cggtggcgtc actccgctcg gcggcgaacg gaccggccgc
     6661 ggccagatca tggctcgccc cggccaggtc gccccggtac aaccgggccc ggccccgaag
     6721 ggcgaagccc tccacggtgc tgtcggtggc caccaggcgt tcggcccggt cggtcttccc
     6781 gtcgcgcagc caggcacgcg ccagccgatg ggtcaggcgc tcatgctcct ccagcgagat
     6841 cgtttgcttg agatccgcca gccggcgatc cgcctcctcc agcttccctt ccgaaatgag
     6901 cacgcccacc agcgtggcgc cggcggtggc cgccgcgtcc ggcgaagccc gcggatcgat
     6961 ggacagctgc gccagcatgc gccgcgccga gttctgctcg cccgcatcgg aataagcccg
     7021 ggccgcttcg gccagatgtt tggcccgttg cgtggtctgc cgctcggcca gtgcctccag
     7081 cgttcgagcc cgcgccagtg atgcatctcg cccagtgccg ctccgcacct cctccaggaa
     7141 ctcctgcagc ggaccgacgc cctgggctcc aacggggagc cgtcgcatca gccgctcgaa
     7201 cccggaggtc ggttcgttcc accgggcggc caggctggcg gcgagttgat cggtcggcgc
     7261 ctgggcccga cggtccagct cggccaggag cggcgcccgc cggtccaccg gaatctggct
     7321 caacagcccg accgcggatc cgcgatagcc cggcgtggcg cgaatggcca gcagccattc
     7381 cgagacggcg agcgaatagt cgccttccca ggtggccagc tgcgcgatct ccccggcaag
     7441 cgcatcggga cggcccagcc gttcacgccc caattgatag gcccttcggg ccgccgtccg
     7501 atcgcgccgg gccagcgccg cgaaccccca ttcgcgataa ggcgcctcgc tggccggctc
     7561 gacggcggac cagcggttga ccagccccac gaccgaatcg gcccgatcgg ccgcggtcca
     7621 ggcccgcacc gccacggcga acagcacggg attcttgggc tcggccgcca ccgccgccga
     7681 ggccggcggt cccaggtcac cggaacgacc cagctcatga agcacccgct ccagtcccag
     7741 caacgagttc aggtcggccg gatgagcggt caggatctgg cggtagcctg ccgcggcctg
     7801 gacatagctg cccctgcgtt ccagctcgaa ggcacggtcg tagggcgtcc gttgcgccgc
     7861 ggccggcacc gcccaaccca gcagcaagca cagggcgcga cccgtcatcg gccgttcctc
     7921 gacgccagcc gccggaagta ttcggtgacc atgcgccgct cctccgggga aagtcgctgc
     7981 agctcatccc aggtggggaa tcggatcgcg ccgtcttcgc ccagtctgcg ccgcagcgcg
     8041 ggaggcaaac gcacttcgcc ttccttggcg gcggtgctct gccgttcctt ccgttcatcc
     8101 tcctcttcgc cccgcagggt tcgccccgca tcgagcatgc ggcggaacag gcgttcctgg
     8161 cgttgcaccg tttcacgatc gagctggtgg gcttccagct ttcgggccag ctccttggct
     8221 tcctcggcca gctgccgggc gccgggaatc tgtccctcgg cccgcatccg ttccatctcg
     8281 cgggccagtg agcgctggtg cgcggccatc gcctgcaact gctgctgaat cgacgccgag
     8341 cccgccatgg ggagcagacc accggcctgc tggctcagct gaccctgctg ctgcgccatc
     8401 tgggtcatcc gctccaaggc ttccgccaga cccgaccccg acgacgagcc ggagacatca
     8461 tcgcgcgatc gcaccatctg aaaggccgcg gcgttgagcg cgtctaccgc gtcgccggcc
     8521 cgttcggccg cttcgcgcag gttgggactg gcggacgaga ccgcgtctct cgcgagcccc
     8581 atctcgcgcc gggccaccgc cagcgccacc gcgatctggg gcgagaccag cgcgttcttc
     8641 cccgccagag cggtagcctg ctccagcagc ttctgggcgc tctcttccac tgtggcctgt
     8701 tcccgccggg ccgagctcag ggtggccccc cgccgaaacc cgccggccac gtccagctgc
     8761 tgccggctca gggtcgcggt ttccgccaga gcccggtcca gcgcctgtag cacttccttg
     8821 cgccaggttt cctgctgctg gtcccgctgt tcggaggtct cgcgctccac ctgttccatc
     8881 tgcgattggg cctgttcacc ttgttgccgc gcctgctgtc gctggccttt ctgggacgag
     8941 gccgcggcgt tccgcatctg ctgcgccgcc tgacgagcct gctgggccgt ctggctcatc
     9001 tgctgcctgg cgccagcctc ttccatctgt tgcgacgccc gctccagtcc gccggccagg
     9061 gtatcggcct gggccgccag tttctgttcg gcggcggcgg ccgcggccga atcgctggcc
     9121 gcggcggtct ggttccactt cttctgctcg gtggccagct ccttggcatc gtcggccagc
     9181 gcactaagct cgccctccaa cgcggcccgg cggaacagct cgcgggcccg ctccagcgct
     9241 tcgcgcaatg cctgctgggc ttccgccagc tgcttgaggg cctcgcgcgc ggcctgggga
     9301 tcgaggttct ggagcgactt ctgcaactcc gccagtttct gccgcagctc cggcgtgagc
     9361 gcgcgatcca gttgctcacc gatttcggcc agtcgccgcg ccagcgccgt gtcggcctcc
     9421 tcgccccgtc gcgccgcctc ttccatcgct tcgagggttt cgcgcagctg gtcggcctga
     9481 cgcagcagct cctcctggct gcgagccacc gcctcggcgc ggcgggcctc ttcgaatccc
     9541 agcgcctgct ggtcccggcc ctgcccttcg gcccggatcc gctcccgcgc caggtcttcc
     9601 gattgccgtt ccaggcgccg gctcgcggcc accagtgaat cgagctgttg tcgcgcctga
     9661 cccgaggctt cccgttgcgc ctggcgttga tcggattcgg tgggcaccac cacgatgaac
     9721 tcgcgggatt caccgacctg gcgttgggga ctgttgtcgg tcgcacgcac taggtagcgg
     9781 accgtgtcgc ccgggtggag cgcgcgggcc gagaggtcga atacgaactc gaccagtgcg
     9841 cgctcgcgcg actgctcgga gagcgccacc gattccacca ccggggtcgt gccggaggtt
     9901 cggctggcga cgtcgatgcg gacgatgcca tgatcgtccc gcgcgtcgat caggagcgga
     9961 atccgcaggt cgagcggagc gatggtgtcg accccgggag agggaacctc caccaccggg
    10021 atgctgtccg ggacgaccac cagcgggatg cgcaccggat cgcttgccac cggtgtgccg
    10081 tcgtcggcca gcagcgacag agtccagctg ccgctctgca acgggacgaa ctgacccgcg
    10141 aagcggcggc ctttcggatt gagagtcacc cgccggcccg gaccgagcca gacggccgac
    10201 gtcagcacgg tggatgcctc gccttcggta tcgagcgtgg tgccggctgg gagcatcagg
    10261 gtgtcgccgc tgaggggcag cgactcgtct tccagcccca ggtaatcggg ataccatgcc
    10321 gtgacccgca acgcgccgag aaaggccggg atccgcaccc ggacgtgtac cgtgtcggaa
    10381 ccgcggctgc cgctcgagag ccggaagtac atgtcgctcg ccagcccctc gagccgccgt
    10441 tccgcctgcc ccagcgaatc cagcatgacc ggcgtttgag cccacggctg ccccggagcc
    10501 cggctgaaga gggtggccga ccgctgtcct tcagcttcca acagcaaggt gacctctcca
    10561 cctcggtcaa ccacgtcggg aacggcgcgt aaccgcactg gtgcccgcag cagctgcagc
    10621 gcctggcccg gacgccagag gatcgccacg gggccccggg ccggacgggc cgacgccagc
    10681 gcagtgatcg cggccagggc agccagcccg agccagccgg cccgccggcg cagccgacgc
    10741 gacaactggt ggagcgcctc gcccccctgg gaatcgaccc gggccgagca gacctcgtcg
    10801 gccacgaagg ccagtcccga tgaagtgccg gcggccggcg cctccagctg accccgaagc
    10861 gcgccgcgcc gggcgccgcc ggcggactcg atcgcacccg caagatcacg cggccccagc
    10921 cggtgacgct cgcggcgggc cagccagagg aagaggacca cactcagggc cgccccgccc
    10981 caggcgacga aagtgaccgt cgcgggaccg gccagcccca accggatgga ccaggccgcc
    11041 agacccagta cggccgccat ggccgcgacc gcgcccagac cccagccggc gccgctggta
    11101 aggcgcagcg gacggcctaa ccggtccaat gcctcgccag tccgactcac gagccgtacc
    11161 ccaccgcgta cgcgaataga ttcacgccca gccgcaaggc ggactcgcgt ttctcgggag
    11221 gatccttgtg aacttcgggg tcttcccagc catcacccag gtccgtttca taggagtaga
    11281 acaccgccag ccgcccgtcc agaaagaggc ccagtccctg ggccggcttg ccatcgtgtt
    11341 catgaatctt gggtattcca cggggaaacg gatacaccac ccgatagatc ggatgatcgg
    11401 ccggcacatc caccagttcg gcctccggaa acacccgctt catttcccgc cggaacgact
    11461 catccatacc atagttgtca tcggcatgca gaaacccgcc ctgccggagc cagcggcgga
    11521 gaatctccag atcggcatcg gagaaccgca cgttgccatg cccggtcatg tagaggtagg
    11581 gcagatccca taaccggtct tccctgagct gaaccaccac ctcgcgggcc gcgaccttca
    11641 gggtggttcg ttcgccaatc gtcttgagca gattgggcag gctcgacggg ttggcatacc
    11701 agtccccgcc cccgtcgtag tgcaaccgtc cgatggtcag ctgggcctcg gccgccgcga
    11761 tcggtgccgc cgacatcacg gcaattagcg ccagcctacc gatcatggca gctccatgac
    11821 caggcggtag gccgcgttgc gcgagagtcc ggtttcgacc gcgacttggc gagcggcctc
    11881 ccgccgcgtc acgccggtcg ccagcaatcg ggatgcgatg gcacgggccg cctccgagtc
    11941 ggccaccggc gccagtggtg gctcgctccc ctcgaccact acggtgcatt cgccccgcgg
    12001 ttccgtcttc ccgtaatgtc cggccagctc ggccagcgtt ccgaccctgg tttcttcatg
    12061 caacttggtc agctccctcg ccacggctgc gcgccgctcc tcaccggcct cacgggccag
    12121 gtcctcgagc aagccatgca gccgtggcgg cgcctcgaac agaaccacgg tcagctcgct
    12181 ttgcgccacc tgccgcaaca ggcgttcccg ctcggctccc ttccggggca gaaatcccag
    12241 aaaaatgaaa cgatcggcgg aaaagccgct ggcggagagg gccgtgatca cggccgaggg
    12301 tcccgggatg gggacgacat ccccgccgcg gtcccgcacg gcctggacca gtgtggctcc
    12361 gggatcactg acggcgggag ttccggcgtc ggtcaccaac gccacatcag tcccgcgttc
    12421 gaccagggat gccagctcct gcaaccggcc gggctcggaa tgcgcgtgaa agctgaggag
    12481 cttgggatgg gcttcgagat ggctcaacag ctgtcgggtc cggcgggtgt cttcggcggc
    12541 gaccaccggt accgtgcgca acacctcagc cgcccgggga ctcagatcgc cgaggttgcc
    12601 gagcggcgtg gcaacgacat atagagtggc gatttgcgag tcacgagtca cgagaaggtc
    12661 ccgccatgcc cgaaatgtga cgcccccgcc tccaggtgtc accttggggg cgggggcgct
    12721 cgcgatgcgc gactggcgct ggtctagaga tgctgctgga tctttgcctc cagcgtggtc
    12781 ttcggcaccg cgccgatgac cgtgtccacg tgcttgccgt ccttgaagaa catcagcgtc
    12841 gggatggagc gcacgttgaa tcgcatcggg gtgcgcatgt tggcgtcgac atccatcttg
    12901 acgatggtcg ccttgccctc gtattgcacc gcgagctgtt ccagcgacgg ggcgatcatc
    12961 cggcagggac cgcaccactc agcccagaag tccaccagca ccagcccctg tcctttttcg
    13021 accacgccgg caaaggtatc gtccgtgact ggaactgtgt tcttgctgtc agccatctca
    13081 atctccgtta gaattcccct gagaccctca ggttacttca gccctcaagc gccatgatgc
    13141 ctaccgttgc gcacatcgga atcgccgtcg aaagcatcga taccgcgctg gcattctatc
    13201 gtgacgtcct gggcgtcgtc cctcatcgcg ccgaggaagc cgacggagcc cgcatcgtct
    13261 cgctcccctt tggcggcccc gagatcgagc tgctcgaacc ggtcagcccc gacgggccca
    13321 tcgcccggtt cctggcccgg cacggtcccg gcatccacca tatctgttac cgggtgcccg
    13381 acctcgaggc ggccctggcc gcctgccggg ccctcggtta tcgcctggtg gacgaaaccc
    13441 cccgttccgg cgcgggtggc cgccgcattg ccttcattca ccccaaagcc acggccggca
    13501 tcctgctcga gctcaccgag tgaaacgtca tccggccggt ttcggttccg gctcagcgat
    13561 ccccgggctt gcggtcatcc atcgcgcacg ggcgcccggg agagccgagc acacccagct
    13621 cgatggcctc caccagccat tggccctgac cggtccgggt cagcgtgaag ggcacctgcc
    13681 gacgacagtc gtcgcgggtg acctccacca gcagcaccgc gcgagagctg ctgcgttccg
    13741 gctccgccag tacctttacc ttgctgcccc gcagataggc gtgaatgatt gcgatgcgcc
    13801 ggggataatc gctgggcttc ccggtctccg ccgccgaacc gctcgacgtg ccccagagct
    13861 gggccatgcg agccaggtta ctgtcactca cggcgcggat gaactgatcc agcgccgcgt
    13921 tcggcccggg gtctggttcc acactggccg tgcttccgcc gccgcatgcg gccagcagga
    13981 ccagaaacaa cacagtcagg gctcgcacga tggtctgctc ctcggataac gtggtgcgaa
    14041 actaaacgac gctgaacgtc acgagcaatg cgccccatcc ggctctacat caacatcgac
    14101 cacgtggcga cggtgcgaca ggcccgtcgt accgacgagc ccagtccggc cgccgcggcg
    14161 cgcctgtgcg aagccgccgg agcccacggg atcaccgcgc atctgcgcga ggatcgccgc
    14221 cacatccagg atgacgatct cctggagttg agtgaatcgg tcacgacggt gttgaacgtg
    14281 gagctggcca ctgcgtccga tattaccgaa cttgtctgtc ggctccggcc gcaccaggcg
    14341 accctcgttc ccgaacggcg cgaagagatc accaccgaag gcggcctcga tgtgagccgc
    14401 cgcgacccgg ccctgatcga caccatccag cggttgcgct cggccgcgat ccgagtgagc
    14461 ctcttcatcg atcccaccgc ggcggcggtg gaagcatcgg cccagctggg cgtgcaggcc
    14521 gtcgagctgc ataccggccg ctactcgcat acctggcgcg agagtcatgc cgccctggag
    14581 gaggtccgat cggccgcccg actggcccgc cggttgggac tggacgcaca cgcggggcac
    14641 ggcttgacct atctcaacgt gcagccggtc gccgccatcg aggagatcga ggaactgaac
    14701 atcggccaca gcgtcgtcag ccgcgccgtc ctgcatggca tggtcgaagc cgtcaccgaa
    14761 atgggccgcc tgatccggac ggcccgaagg ttgccctgag gaaccagggg aaagacatgc
    14821 tcggatccgc aggccgctcc gaattctttg cccgcgaagc agctgactac ctacgggctc
    14881 tggcaatcct cctcggaccg accccgcccg aaggggacag tgtcgtgcgt cttgcacgag
    14941 cgctccgggg ggctgccatg ctggccggtc cggcatccta cacccgggct gcgagccagc
    15001 tggagcatat cactcgcctg atccgggact cctccctggg atgggccgag gcgctgcccg
    15061 ccctgcgcga agcccacgcc gagttggagc gcctggcggc ccgggcttcg gtgtgggacg
    15121 aagacggcga ccgggccgca ttcgccctgg ccaaccggct ccggtccctg gtggacagcg
    15181 ccccgccccc cgccgcacca cgcccgaccg aacagtcaac ccagagcatc cgcaccttcg
    15241 tggcgcgtga agccgccgcc gtggccggtg ccgcagggga agcggcccgg gcagtcgcgg
    15301 gtgcctccac cccaccggcc gaccggctgg ttcgcatcac ccactcgatg caa
//
LOCUS       DASWKS010000087         8042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2260108, whole genome shotgun sequence.
ACCESSION   DASWKS010000087 DASWKS010000000
VERSION     DASWKS010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2260108"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VGA78_02835"
     CDS             <1..402
                     /locus_tag="VGA78_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892826.1"
                     /translation="TRLYRETVRESLTPTHAPGIYRLVANASPSEAVVDVYGQGYLVQ
                     AEQVGPGLAFAESARPDWQETMEMRALKAGRGNPGTSPVDRVEVEVRLQDILGQGGLI
                     YPVESVTVERAWYCTLPAGSVEVRELGSPSA"
     gene            516..1865
                     /locus_tag="VGA78_02840"
     CDS             516..1865
                     /locus_tag="VGA78_02840"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9892827.1"
                     /translation="MAGSTGRFWPVWNMSFGFLGIQFGWGLQMANMSAIYEYLGARPD
                     QIPMLWLAAPLTGLIVQPIIGHLSDRTWWPPLGRRRPYFLVGAILSSLALIAMPNSST
                     LWMAAGLLWILDASINISMEPFRAFVADLLPPEERTRGFAMQSFFIGFGAVVASALPW
                     IMTNWLGVGPSLAGTIPVTVRWSFYVGAAAFFGAVLYTILTTPEKPPPDLAAFEREKA
                     ATAGIGAGFNQIVAAVRAMPATMRQLALVQICTWLGLFCMWLYFPVAVATNVFGATPG
                     SSRYQQGVEWAGVCFGAYSAVCFAFAFLLPPLARRRGRKGTHAICLLAGAAGLLSVSV
                     ITNPTLLLLSMVGVGIAWASTLSMPYSILAGAIPAGKTGVYMGIFNFFIVIPEIVAAL
                     GFGWVMSHWLNNNRMAAVVAGGVFMLLAAVLVTRVNDPKEAVAPRATPVTDPTEAVA"
     gene            1862..3733
                     /locus_tag="VGA78_02845"
     CDS             1862..3733
                     /locus_tag="VGA78_02845"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX9892828.1"
                     /translation="MRPRVGLVLGVSWLVAGTASAQAPVVEKVDPPNWWTGSTINPVR
                     VLIRGRNLGQARARCSRVRCTGLKVNQAGTYVFVDVTIPGGTAPGRYPFTLETAAGSV
                     EVPFALTAPLPARGRFQGFGPDDVIYLLMPDRFANGDPSNDNPAVSPGLVDRTKGRYY
                     HGGDLVGVRQRLPYLKSLGITAIWFNPIYDNSNALNRRETYEGQPITDYHGYGAVDFY
                     AVDEHFGDLAGFRQLVDQAHGHGIKIILDMVANHTGPYHPWVASSPTPTWFNGTTENH
                     LANTWQVWTLADPYSSTAVREATLNGWFANILPDLNQDDPEVARYIIQNSLWWVGVSG
                     IDGIRQDTWPYVPRRFWRDWMTALKREFPKLRVVGEVWDGNPALVAFFEGGRPQFDGI
                     DDKVDLLFDFPLFYPMRRAFGEGGHLREVAQMLSHDRLYRDPTSLVTFLGLHDVQRFM
                     NEKGATPAGLKLAYTFLLTTRGTPLIYYGDEIGLPGGGDPDNRRDFPGGWREDGRNAF
                     EASGRTAEEQSIFSHVQALLKLRASRPGLRGRRTETLVVGEQTLVYRRGETVIALNND
                     SLPATVRLPSGALGPDLLGACPLPRPDGGVRVAAIPPRTGCLFPAGSDSVANRPGGD"
     gene            3679..3924
                     /locus_tag="VGA78_02850"
     CDS             3679..3924
                     /locus_tag="VGA78_02850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892829.1"
                     /translation="MPLPRWVGLGRESARRGLKASPRIAAGNRTRLLVSPDSIHREMN
                     YNSGGEVSKETEKDARTAHIKLHHETGKWSTLQLPGN"
     gene            4006..>8042
                     /locus_tag="VGA78_02855"
     CDS             4006..>8042
                     /locus_tag="VGA78_02855"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HEX9892830.1"
                     /translation="MLAIGVVPLDAQQERVAFRHLTIADGLSQNAVQAIVQDHRGFMW
                     FGTKDGLNRYDGYQFVVFRHDPFDSTSISDSDITALFEDKAGWLWVGTRGGGLNRFDR
                     ASERFQRYRSGPNRPITSIAEDAGGIWIGTDGEGLFRITAQDSGPGAFQRWVHDAVDS
                     RSLSNNRINAVLADRRGDVWVGTESGLDRLDRSSGGPAGFTKYRARSDAPNGLIDREA
                     SALYEDAQGRLWIGSLPGVSVFDSARTRISHFYHRYRTYRYGWGEAVEMQEDRAGRIW
                     IATASELMQLDPSTGSFRYFRHNPLDPQGINSNLPIALFRDRSDILWIGTNGYGLNLH
                     DPKANRFGLFRRPASPTQRPSRQAGFSVYTLFEDAAGTIWIDAGLLYRWNRATGAFTS
                     FETSSSRPDDFGNTGVWAIVENPPGGLWTATYRGLYRYEIATGRSRLYRHDPADAGGL
                     PEQVVFDVFQDRDGTLWVVTENYLARLTDPESGRFTSYPYKEHPTTGQWVFPSTVQDP
                     EGFLWLGSNEGLARFDPATGSFRRYRSDPRRPISLSNDAIRALLPDPKQPRRFLWIGT
                     AGGGLNRFDRETETFTHFTEDTGLPNNVVYGVLADGGGKLWLSTNRGLSRFDPETGRF
                     RNYDANDGLQSNEFNSGAAFKSRSGELFFGGIYGFNYFRPEDIRDNPHVPEVAITAFR
                     RGNRFETVRDSGTALDRSIPETDTLRLSYQDDVIGLEFAALEYSAPAKNRYAYRLVGF
                     NDEWIESGAVRSATYTNLPPGRYTFEVKGSNNDGVWNETGASLAILISPPWWQTWWAY
                     SLYVVLAFSALYGARQYEMNRLRLKSRLEIEQVEAEQLRQLDRARSRLFANVSHEFRT
                     PLTLTLGPLDDLRAGLHGPLTPAMADQVELARRNAGRVLELINEILELARAEAGRTAV
                     RARRLDLGGFVAGVARSFVPLAERKAIGFEVVPPTEPITLYADPGHLEKVVSNLLSNA
                     FKFTPRNGAVRLTVTADAATARIGVRDSGPGIPADERTRVFDRFHRVEATAGNQPGTG
                     IGLALAKELAGLHGGSITVESEVGVGSSFVVALPLGRAHLTDDQIAAEGEIVTAPSTH
                     PIIPPRPEMTPALSEKVPAAEDDVTTVLIIEDNDEVRAYVRQHLMPAYRVLEAVDGEA
                     GLEMTRRLLPDLVLSDVMMPGLDGYALCRAIKTDPETEFIPVILLTARAEPADRLAGL
                     REQADDYLTKPFEVGELLTRIENLIAIRRRLRERFKGTVPAPAPRLQPTPAAVEPADE
                     QFLDRVRMAIEANLDEESFNVEKLAREVAHSRGHLHRRLRHLLGETPSDLIRRMRLER
                     AAQLLESQTGSVAEVAYSVGFKSVA"
BASE COUNT         1328 a         2695 c         2645 g         1374 t
ORIGIN      
        1 acccgattgt atcgcgaaac tgtgcgcgaa tcgctgacac ccacccacgc gcccggtatc
       61 tatcgcctgg tcgcgaatgc cagtccgagc gaagcggtcg tcgatgtgta cggccagggc
      121 tacctcgtcc aggccgagca agtcggcccg ggactggcct ttgccgaatc cgcccgtccc
      181 gactggcagg agacgatgga gatgcgggcg ctgaaggcgg gccgcggcaa cccgggcacg
      241 tcaccggtgg atcgcgtgga ggtcgaggtg cggctgcagg acattctggg ccagggcggg
      301 ctcatctatc cggtggaatc ggtgaccgtg gagcgcgcgt ggtactgcac cctgccggca
      361 ggttcggtgg aagtacgcga actgggtagc ccttccgcat agacggctca gcaggtcgac
      421 gaaaacacca ggaccggttt cggcacccgc aaggcccgcc agagcatagc gcggggctca
      481 tcgatctcca tcgtttggca aacccaggag actccatggc agggagcacc gggcggttct
      541 ggcccgtctg gaacatgagt ttcgggttcc tcggcatcca gttcggctgg ggtctccaga
      601 tggccaacat gagcgccatc tacgagtacc tcggcgcccg acccgaccag atcccgatgc
      661 tctggctcgc cgccccgctc accggcctca tcgtccagcc catcatcggc cacctgagcg
      721 accgcacctg gtggcctcct ctggggcgcc ggcgaccgta cttcctggtg ggcgccatcc
      781 tgagctcgct cgcgctgatc gccatgccga actcgagcac cctttggatg gcggccgggc
      841 tgctctggat tctcgatgcg tcgatcaaca tcagcatgga gccgttccgg gccttcgtgg
      901 cggacctgct gccccccgag gagcgcaccc gtggcttcgc gatgcaaagc ttttttatcg
      961 ggtttggcgc ggtggtcgcg tcggcgctgc cgtggatcat gaccaattgg ctcggcgtgg
     1021 gacccagcct cgccgggacc atccccgtga ccgtccggtg gtcgttctac gtcggcgccg
     1081 ccgccttctt cggggcggtg ctctacacca ttctcaccac cccggagaag ccgcccccgg
     1141 acctcgccgc ctttgagcgc gagaaggccg cgaccgccgg catcggcgcc ggtttcaacc
     1201 agatcgtggc tgccgtgcgg gcgatgccag ccaccatgcg ccagctggcc ctggtgcaga
     1261 tctgcacctg gctgggcctc ttctgcatgt ggctctactt cccggttgcg gtcgccacca
     1321 acgtgttcgg cgccacaccg ggctcgtccc gctaccagca gggtgtcgag tgggccggcg
     1381 tctgcttcgg ggcgtactcg gccgtgtgct tcgcgttcgc cttcctgctg ccgcccctgg
     1441 cccgccgccg ggggcggaag ggcacccatg ccatctgcct cctggccggt gccgcggggc
     1501 tcctgtccgt ctccgtcatc accaacccga ccctgcttct gttgtccatg gtcggcgtcg
     1561 gcatcgcctg ggccagcacg ctctcgatgc cctattcgat cctggccggg gccattccgg
     1621 ccgggaagac cggcgtctac atgggcatct tcaatttctt catcgtcatc cccgagatcg
     1681 tcgccgcgct cggatttggg tgggtgatgt ctcactggtt gaacaacaac cggatggcgg
     1741 cggtggtcgc ggggggggtg ttcatgctgc tcgcggccgt gctggtgacg cgggtgaacg
     1801 accccaagga ggcggtggct ccgcgcgcga caccggtgac cgacccgacg gaggcagtgg
     1861 catgagaccg agggtcgggc tggtactcgg ggtctcctgg ctggtggccg gcaccgcgtc
     1921 cgctcaggct ccggtagtgg aaaaagtgga cccgcctaac tggtggaccg gatcgaccat
     1981 caatccagtg cgggtcctga tccgcggtag gaacctgggc caggcccggg cgcgatgctc
     2041 gcgggtgcgg tgtaccgggc tcaaggtcaa ccaggccggc acctatgtgt ttgtggacgt
     2101 caccatcccg ggcggcaccg ctcccggtcg atatccgttc acgctggaga cggccgccgg
     2161 aagcgttgag gtaccgttcg cgctcaccgc tcccctgccc gcccggggcc ggttccaggg
     2221 cttcgggccc gatgacgtga tctacctcct catgccggat cgcttcgcca acggagaccc
     2281 ctccaacgac aacccagccg tctcgcccgg tctcgtggac cgcaccaagg gccggtatta
     2341 tcacgggggc gatctggttg gcgtgcgcca gcgcctccct tatctcaaat cgctcgggat
     2401 caccgcgatc tggttcaacc ctatatacga caacagcaat gccttgaacc ggagggagac
     2461 gtacgagggc caaccgatca ccgattatca cggctacggc gccgtcgact tctatgcggt
     2521 ggacgagcac ttcggggacc tggccgggtt ccggcaactg gtggaccagg cccacgggca
     2581 cggcatcaag atcattctcg atatggtggc aaaccacacc gggccctacc acccgtgggt
     2641 agccagctcg cccacgccca cctggttcaa cggcacgacc gagaaccacc tggccaacac
     2701 gtggcaggtc tggaccctgg ccgatccgta cagctcaacc gccgtgcggg aagcgaccct
     2761 caacggctgg ttcgccaaca tcctgcccga cttgaaccag gatgatccgg aggtggcgcg
     2821 ctacatcatc cagaattcgc tctggtgggt gggagtgagc gggatcgacg ggatccggca
     2881 ggacacctgg ccctacgtgc cgcggcgatt ctggcgggac tggatgacgg cgctcaagcg
     2941 ggagtttccg aagctcagag ttgtgggtga agtctgggac ggcaacccgg cgctggtcgc
     3001 gttcttcgaa ggcggccgtc cccagttcga cggcatcgat gacaaggtcg atctgttgtt
     3061 cgactttcca ctcttctatc ccatgcgccg ggccttcgga gaaggcggtc atctccgcga
     3121 ggtggcgcag atgttgtcac acgaccggct gtaccgcgat ccgacttcgc tggtcacctt
     3181 cctgggcctg cacgacgtgc agcgcttcat gaacgagaag ggcgccacac cggccggact
     3241 caagctggcc tacaccttcc tcctcactac ccggggcacg ccgctcattt actatggcga
     3301 cgagatcggc ctgcccggcg gcggcgaccc ggacaaccgg cgcgattttc cgggtggctg
     3361 gcgcgaggat gggcgcaacg ccttcgaagc gtcgggcagg accgcggagg agcaatccat
     3421 cttctcgcac gtgcaggcgc tgctcaagct ccgggcctcc cggcccgggc tccggggccg
     3481 gcgcaccgag acgctcgtgg tgggggagca aaccctggtg taccggcggg gcgagactgt
     3541 gatcgcgctc aataacgact cgctgccggc cacggttcgc ctccccagcg gcgccctggg
     3601 cccggatctg ctgggcgcct gtccccttcc ccggccggac ggcggcgtaa gggtcgccgc
     3661 gatcccacct cgaaccgggt gcctcttccc cgctgggtcg gactcggtcg cgaatcggcc
     3721 cggcggggac tgaaggcgtc gccgcgcatc gcggcgggga accggacccg gctgctggtc
     3781 tcacccgact cgatccaccg ggagatgaat tacaactccg gcggagaggt ttcgaaggaa
     3841 accgagaaag atgcccgaac ggctcacatc aagctgcatc atgaaaccgg gaaatggagc
     3901 acgctgcagc tcccggggaa ttgaaactcg gtcggatgtg tcgggtggtc gggtagtcga
     3961 atgaggtatt gcatcggttc acttagccca gcgctggtcc tgtcgatgct ggccatcggg
     4021 gtcgtgccgc ttgatgccca acaggaacgg gtggcattcc ggcatctcac catcgcggac
     4081 gggctgtccc agaacgccgt tcaggcgatc gtgcaggatc accgcggctt catgtggttc
     4141 ggcaccaagg acgggctgaa tcgctacgac ggctaccagt tcgtcgtctt ccggcacgac
     4201 ccgttcgatt ccacctcgat ctccgacagc gacatcaccg ccctgttcga ggacaaagcg
     4261 ggctggctct gggtcggcac ccgcggcgga ggattgaacc ggttcgaccg ggccagcgag
     4321 cggttccagc gctaccggtc gggccctaac cggccgatca cctcgatcgc cgaggacgcc
     4381 gggggcatct ggatcggaac ggacggtgaa gggctcttcc ggatcacggc ccaggactcc
     4441 ggtcccggcg ctttccagcg atgggtccac gacgcggtcg attcgcggag tctcagcaac
     4501 aaccgcatca atgccgtgct ggccgaccgg cggggcgatg tctgggtcgg caccgagtcc
     4561 ggactggacc ggctcgaccg cagctcgggc gggccggcgg gcttcaccaa gtatcgggcg
     4621 aggagcgacg cgccgaacgg gctgatcgac cgagaggcct ccgccttgta cgaggatgcc
     4681 caggggcggc tctggatcgg ctcgctcccg ggggtcagcg tcttcgattc ggcccgcacc
     4741 cgcatcagcc acttctacca tcgctaccgc acctaccgat atgggtgggg tgaggcggtc
     4801 gagatgcaag aggaccgagc cggccggatc tggatcgcca ccgcgtccga gctgatgcaa
     4861 ctggatccct ccaccgggag cttccggtat tttcggcaca atccgctcga ccctcagggc
     4921 atcaatagca acctgccgat cgcgctgttt cgggaccgtt cagacatcct ctggatcggg
     4981 accaacggct acggcctcaa cttgcacgac cccaaggcga accggttcgg gctgttccgc
     5041 cgccccgcat cccccacgca gcggccatcc cggcaggccg gattcagcgt gtacacgctg
     5101 ttcgaggatg ccgcgggtac gatctggatc gacgccggac tgttgtaccg gtggaaccgg
     5161 gccaccggcg ctttcaccag cttcgaaacc agctccagcc gccccgacga cttcggtaac
     5221 accggggtct gggccatcgt ggagaacccg ccgggcgggc tgtggacggc gacgtatcgc
     5281 ggactctatc gctacgaaat tgccaccggt cgttcccggc tgtatcggca cgatccggcc
     5341 gacgccggcg ggttgccgga gcaggtggtg tttgacgtgt tccaggaccg ggacggcacg
     5401 ctgtgggtgg tgaccgagaa ctatctcgcc cggctgaccg acccagagtc cggccggttc
     5461 acttcgtatc catataagga gcatccgacc acaggccaat gggtctttcc ctccaccgtg
     5521 caggacccgg agggattcct ctggctcggg tcgaacgaag gactggcacg cttcgatcct
     5581 gctaccggat cgttcaggcg ctaccgcagc gatccgcggc gacccatcag cctcagtaac
     5641 gatgccattc gcgccctcct ccccgatccg aagcagccac ggcgcttcct gtggatcggg
     5701 acagcgggcg gcgggctcaa ccggttcgat cgcgagaccg agaccttcac gcacttcacc
     5761 gaagacaccg ggctgcccaa taacgttgtc tacggggtgc tggcggacgg cggcgggaag
     5821 ctctggctca gcaccaacag ggggctctcg cgcttcgatc cggagacagg gcggttccgg
     5881 aattacgacg ccaacgacgg cttgcagagc aacgagttca actccggcgc cgctttcaag
     5941 agcagaagcg gcgagctctt cttcggcggg atctacggct tcaactactt ccggcccgag
     6001 gacatccggg acaaccctca cgtcccggaa gtggcgatca ccgccttccg tcgcggcaac
     6061 cgcttcgaga cggtacgcga cagcggcacg gcgctggacc gctcgattcc cgagaccgat
     6121 acgctccggc tctcctatca ggatgatgtg atcgggctcg agtttgcggc gctggaatac
     6181 tcggccccgg ccaagaaccg ctacgcctac cggttggtcg gcttcaacga cgagtggatc
     6241 gagtcgggag cggtacgctc ggccacctac accaacctgc cgccgggccg ctacaccttc
     6301 gaggtcaaag gtagcaacaa cgacggggtg tggaatgaga ccggcgcctc cctggccatt
     6361 ctcatctcgc cgccctggtg gcagacctgg tgggcctaca gcctctacgt agtactcgcc
     6421 ttctcggccc tctacggtgc caggcagtac gagatgaatc ggcttcgcct gaagagtcgc
     6481 ctcgagatcg agcaagtcga ggccgagcaa ctgcgccagc tggaccgcgc cagaagccgc
     6541 ctgttcgcga acgtgagcca cgagttccgg accccgctca ctctcacgct gggtcccctc
     6601 gacgaccttc gcgccggcct gcacgggccg ctgactccgg cgatggccga ccaggtcgag
     6661 ctggcccgcc gcaacgccgg gcgggtgctc gagctgatca acgaaatcct cgagctggcc
     6721 cgggcggagg cggggcgtac cgcggtgcgg gctcgccggt tggacctggg cgggttcgtg
     6781 gccggggtgg cccggagctt cgtgccgttg gccgagcgca aggcgattgg cttcgaggtg
     6841 gttccgccga ccgagccgat cacgctgtac gccgacccgg gtcacctgga gaaagtggtc
     6901 tccaacctgc tctccaacgc gttcaagttc acgcccagga acggcgcggt ccgcctaacg
     6961 gttacggccg acgccgcgac ggcccggatc ggggtgcggg acagcgggcc tggtattccc
     7021 gccgacgagc ggacccgggt gttcgaccgc ttccaccggg tcgaggcgac cgcggggaac
     7081 cagccgggca ccgggatcgg gttggccctc gcgaaagagc tggcgggtct gcacggagga
     7141 agcatcacgg tcgagagcga agtgggcgtg ggaagcagct tcgtggtggc actgccgttg
     7201 ggtcgtgctc acctcaccga cgatcaaatc gcggcggagg gcgagatcgt caccgcacct
     7261 tccacccatc ccatcatccc cccccgccca gagatgaccc cggcactgag cgagaaggtt
     7321 cctgcagccg aggacgatgt caccaccgtg ctgatcatcg aagacaacga tgaagttcgt
     7381 gcctacgttc gccagcacct catgccggcg taccgggtgc tcgaggcggt ggatggtgaa
     7441 gcggggctgg agatgactcg tcgcctgctg cccgacctgg tgctgtcgga cgtcatgatg
     7501 cctggtctgg acgggtatgc cctctgccgt gccatcaaga cagatcccga gaccgaattc
     7561 attccggtca tcctcctgac cgctcgagcc gagccggccg accggctagc cggcttgcgg
     7621 gaacaggccg acgactacct gaccaagcca ttcgaggtgg gggagcttct gacccggatc
     7681 gagaacctga tcgcgatccg gcggcggctt cgggagcggt ttaagggaac cgtccctgcc
     7741 ccggcgccaa ggctgcaacc gactcccgcg gcggtggagc cggccgacga gcagttcctg
     7801 gaccgggtgc gcatggcgat cgaagcgaat ctggatgagg agtcctttaa tgtggagaag
     7861 ctcgctcgcg aggtcgccca cagccggggg cacctgcacc ggcggctccg tcatctcctg
     7921 ggtgagacgc cctccgacct gatccgccgg atgcggctcg aacgggccgc gcagttgctc
     7981 gaatctcaga caggttcggt tgccgaggta gcctactcgg tcggattcaa gagcgtggcg
     8041 ca
//
LOCUS       DASWKS010000088         3485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2261268, whole genome shotgun sequence.
ACCESSION   DASWKS010000088 DASWKS010000000
VERSION     DASWKS010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2261268"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /locus_tag="VGA78_02860"
     CDS             complement(<1..931)
                     /locus_tag="VGA78_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9892831.1"
                     /translation="MRAALFGLVLLAPSSLIAQRVTTPLRAEIDRRAGTVLPKVVAWR
                     RDIHQHPELSNREVRTAKLVADHLTALGLEVKTGVAKTGVVGVLRGGRPGPVVALRAD
                     MDALPVTEQVDLPFKSTQKAMWNGQEVGVMHACGHDNHVAILMGVAEVLAGMKTQLPG
                     TVKFVFQPAEEGAPPGEEGGAGVMIREGVLDNPAPSAIFGLHVWPGQVGTVHYRSGPL
                     MAASDWLFITVKGRQTHGAVPWGGVDPIVVASQIVLGLQTIPSRQVEVTKVPAIVTVG
                     MIQGGNRGNIIPDSVIMQGTVRTFDEAMRADIKE"
     gene            complement(979..1953)
                     /locus_tag="VGA78_02865"
     CDS             complement(979..1953)
                     /locus_tag="VGA78_02865"
                     /inference="COORDINATES: protein motif:HMM:NF005292.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HEX9892832.1"
                     /translation="MTSAGELLYNLDTEVTGADHRIRPYVRETALDYSPELSRAWGAE
                     IFLKLENTQVTGSFKVRGAINRLLSTPISQRALGVVAASTGNHGAAVAYAMAKLNIPG
                     TVYVPTNASPSKLNAIRAWGAEVRVHGEDGLESELEARRYSEAKGLIYLSPYNDPYVV
                     AGQGTIGAELARQLDRVDVVCISVGGGGLIGGVAGFLKGIGRQVTVVGCSPEHSKVMY
                     ESVKAGQILELASEPTLSDGTAGGVEPGAITFPLCRALVDEWALLNETEIAEGIRLAI
                     DHAHQLVEGSAGMALAAARRLAGKYARSNIVVVLCGGNISAETLKQVL"
     gene            complement(1950..>3485)
                     /locus_tag="VGA78_02870"
     CDS             complement(1950..>3485)
                     /locus_tag="VGA78_02870"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9892833.1"
                     /translation="YDHTNSPGCALAIYRDGDIAFARGYGMANLELGIAISPRTVFDI
                     GSTSKQFTAFALGLLAQDGRLSLDDPLRKHIPEMGAYADPITVRNLVQHTSGLRDYLS
                     LMSLAGFNFDDVTDDQDALRLITRQKTANFAPDSEWLYSNSGYFLLSQVVKRSSGKSL
                     RAFADERIFGPLGMRATHFHDDHTMIVADRATGYSPRPGGGYRIEMSNFEQTGDGAVY
                     TTVEELLLWDRNWYSGQVGGAELLERLQQTGKLSSGRDHGYAGGIMLGTHRGLRTVRH
                     GGAWAGYRAELLRFPSERTSIACLCNRGDADPSTRADKVADILLAGKLAAEPVVAAAN
                     GSPAGAMTEQQLSALAGTWRSPVSGDLRFFEVRGGKLFPRGSSTEVRAQGADRFVWGP
                     YTAILAGGPGGSLRVEREGRSPETYQRLAPVSANAGSLQAYAGTWYSEELDAFWRLIP
                     SDSGLTIEIRDRPSGGLRQVGYDLFSDGGRHVEFTRLNGRLTGFTVSAGRVRGIGFTR
                     SSK"
BASE COUNT          572 a         1215 c         1112 g          586 t
ORIGIN      
        1 gctccttgat gtcggctcgc atggcttcgt cgaaggtgcg aaccgtcccc tgcatgatca
       61 cgctgtcggg aatgatgttc ccgcggttgc cgccctggat cattcccacc gtcacgatcg
      121 ccgggacctt ggtcacctcc acctgacggc tgggaatggt ctggagcccg agcacgatct
      181 gggacgccac cacgatcggg tccactccac cccagggcac ggccccgtgg gtctgacgtc
      241 ccttgaccgt gatgaagagc cagtccgagg cggccatgag cggcccggaa cgatagtgca
      301 ccgtcccgac ttggccgggc cagacgtgca gaccgaagat cgccgagggg gcgggattgt
      361 cgagcacccc ttcgcggatc atgaccccgg cgcctccctc ctcgcccggc ggtgcacctt
      421 cctcggccgg ctggaacacg aacttcactg ttcccggcag ctgagtcttc atcccggcca
      481 ggacttcggc cacgcccatc aagatcgcga cgtggttgtc gtggccgcat gcatgcatca
      541 cccccacttc ctgaccgttc cacatggcct tctgggtgga cttgaagggc agatccacct
      601 gttcggtcac cggcaacgcg tccatgtccg cgcgcagcgc gaccaccggc cccggccggc
      661 ctccccgcag cacgccgacc acaccggtct tcgccacacc ggtcttcacc tccagtccca
      721 gtgcggtgag atgatcggcg accagcttgg cggtgcgcac ttcgcggttg gacagctcgg
      781 gatgttgatg gatatcgcgc cgccacgcca ccaccttggg caggaccgtc ccggcccgcc
      841 gatcgatttc cgcccgcagc ggcgtggtta ccctctgggc gatgagcgac gatggggcaa
      901 ggagaaccag gccgaacagg gcggcacgca tgagatgagg cacctttgag tagaagactt
      961 gcgactcggg acccgccact acagcacttg cttcagcgtc tccgcactga tattcccccc
     1021 acacaacacc accacgatgt tgctgcgggc gtactttccc gccagccgcc gggccgctgc
     1081 gagcgccatg ccggccgagc cttccaccag ctgatgggcg tggtcgatcg cgagccggat
     1141 tccctcggcg atctcggttt cattcagcag ggcccattca tccaccaggg cgcggcagag
     1201 agggaaggtg atcgctcccg gctcgacgcc tcccgcggtt ccgtcggaga gcgtcggctc
     1261 cgacgccagc tccaggatct ggcccgcctt caccgactca tacatcacct tcgaatgctc
     1321 gggcgagcat cccaccacgg ttacttggcg cccgatgccc ttcaggaagc cggccactcc
     1381 accgatcagc ccgccaccac cgaccgatat gcagaccacg tccacccggt ccagctgccg
     1441 ggccagctcg gcgccgatgg ttccctggcc ggctacgacg tacggatcgt tatagggcga
     1501 caggtagatc aggcccttgg cttcggaata ccgccgcgcc tcgagctcgg actctagccc
     1561 gtcctcgccg tgcacccgta cctcggcgcc ccaggcccgg attgcgttca gcttggacgg
     1621 gctcgcgttc gtgggcacgt acaccgtgcc cggaatgttg agcttcgcca tggcataggc
     1681 gaccgccgca ccatgattcc cggtgctggc cgctaccacg ccgagggccc gttggctgat
     1741 gggggtcgac aacagccggt tgatggcgcc gcgcaccttg aacgacccgg tgacctgagt
     1801 gttctccagc ttgagaaaga tctcggcgcc ccaggcccgg ctcagttccg gcgagtaatc
     1861 gagcgcggtc tcgcgcacgt aggggcgaat gcggtggtcc gcccccgtga cttcggtatc
     1921 gaggttatag agcagctccc cggcagaggt cacttactgc tccgggtgaa gccgatgccg
     1981 cggacccgac cggcggagac ggtgaacccg gtgagccggc cgttgagccg ggtgaactcg
     2041 acgtggcgac ccccatcact gaagagatcg tacccgacct gccgtaaccc tccgctggga
     2101 cggtcgcgaa tctcgatcgt caggccgctg tccgaaggga tcagccgcca gaacgcgtcc
     2161 agttcctcgc tgtaccaggt tccagcgtag gcctggagac tcccggcatt ggcgctgacc
     2221 ggtgccagcc gctggtaggt ttccggggag cggccttccc gctcgacccg aaggctcccg
     2281 ccgggacctc cggccagaat cgccgtgtag ggaccccaga cgaaccggtc ggcgccctgg
     2341 gccctgacct cggtgctgct gccccgggga aacagcttgc cgccgcgcac ctcgaagaag
     2401 cggaggtctc cgctgaccgg actccgccag gtaccggcca gggcggacag ttgctgctcg
     2461 gtcatcgcac cggccggtga cccattcgcg gccgcgacca ccggctctgc cgcgagcttg
     2521 ccggccagca ggatgtcggc gaccttgtcg gcccgggtcg aaggatcggc gtcgccccgg
     2581 ttgcagaggc aggcgatcga ggttcgctcg gacgggaatc gcagcagctc ggcccgatac
     2641 ccggcccagg cacccccatg ccggaccgtg cgcaagcctc ggtgggtgcc gagcatgatg
     2701 ccgccggcgt agccgtgatc ccggccgctc gacagcttgc cggtctgttg cagccgctcc
     2761 agcagttcgg cgccaccgac ctgccccgaa taccaattgc gatcccacag cagcagctct
     2821 tccacggtgg tgtagaccgc cccatcaccg gtctgctcga agttcgacat ttcgatccgg
     2881 tagccgccac ccgggcgggg ggaatagccg gtggcccggt ccgcgacgat catggtgtga
     2941 tcgtcatgaa agtgggtcgc ccgcatcccc aggggcccga agatccgctc atccgcgaag
     3001 gcccgcagcg acttgccact gctccgcttc acgacctggg acagcaggaa atagccggaa
     3061 ttgctgtaga gccactcgct gtcaggggcg aagttggccg tcttctgccg ggtgatgagt
     3121 ctgagcgcgt cctgatcgtc ggtcacgtcg tcgaagttga atcccgccag cgacatcagg
     3181 ctgagatagt cgcgcagacc gctggtgtgc tgcaccaggt tgcggacggt aatcgggtcg
     3241 gcgtaggccc ccatttccgg aatgtgtttg cggagcggat cgtccagcga caaccgcccg
     3301 tcctgcgcca gcagcccgag ggcaaaggcg gtgaactgct tggaagtgga cccgatgtcg
     3361 aagacggtcc ggggcgagat ggcgatgccg agctccaggt tcgccatacc gtagccgcgg
     3421 gcgaaggcga tgtcgccgtc gcgatagatc gccagggcgc agccggggct gttggtatgg
     3481 tcata
//
LOCUS       DASWKS010000089         7024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_39538, whole genome shotgun sequence.
ACCESSION   DASWKS010000089 DASWKS010000000
VERSION     DASWKS010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39538"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VGA78_02875"
     CDS             <1..736
                     /locus_tag="VGA78_02875"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9892834.1"
                     /translation="VLRWNPGVNAMVYAGNGYAVLLPNYRGSTNYGERHRLDIVGNYF
                     QKGYEDIISGVDALVAQGIAHPDSLGVMGWSAGGHWSNWIMTQTTRFKAISSGAGAVN
                     WISMYAQSDVQRNRAEYFARGKKPWEDFESYWRVSPLRYIRNAKTPTLIHVVDGDPRV
                     PRPQSEELHMALKQQGIPTEFFVYPGTTHGIPDARNQYLKAVAEFQWFEKWIRGKPWF
                     AWKDLLKTVDDAAGPPSVRTAGNGDQ"
     gene            733..1239
                     /locus_tag="VGA78_02880"
     CDS             733..1239
                     /locus_tag="VGA78_02880"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9892835.1"
                     /translation="MTRPSVRLSIVVAFLAAATTGGHAQVHRSRAPTATSIREAYLEE
                     VARGTTETVDRLKRAFQADNPDDYVREFTPGGLYSPATGESRYGAAAIKVALGRRMPR
                     FGGMTLTRTDWTASGNLAYTFGRYFYGPISEGGAVEQGTYVMVLLMEGREWKIRSYIE
                     RVDPGQGE"
     gene            1259..2401
                     /locus_tag="VGA78_02885"
     CDS             1259..2401
                     /locus_tag="VGA78_02885"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX9892836.1"
                     /translation="MEYASLFGVEPTLGPLEQDYRRHYLKADASQATFILAATIGALL
                     LTNLVDLGSAGFTRDTVRRLWVIGTGGVVTIIIIPLLRRVQRAAVLDLLVFVWSLAVA
                     LVVVYFRSTHAPIVSEATVAVLALGCYTVVPNRLLFRVIPAFLLTAGDASLLFRRPEG
                     GTSAGYAVIFAYGFIHLVGIWSSSTLHRFRRRQFEALAGEQSARSEMQRLVRTDSLTG
                     LISRAHFIERAEQELGRYRRYNTPFATLIVDLDHFKAVNDTYGHSAGDEVLRRFADLL
                     QRHSRSNDLVGRLGGEEFGLLLPETRLVDAREVAARIVADCRELEVAVESHRLRFTVS
                     VGVTEADPLDGGFSDVLRRADAALYAAKQQGRDRVETLPQPPASSY"
     gene            2408..4714
                     /locus_tag="VGA78_02890"
     CDS             2408..4714
                     /locus_tag="VGA78_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892837.1"
                     /translation="MPLSVESVVEFLFKYRPVVFDKGRFAFGASQPAMLVALGLLGLA
                     LTAVVLTWRRAPGHATPRARVALVAIRAVALALVFWCLLQPTLLVTTAVPQRNVVGIL
                     VDDSRSMGIADNGQTTRADQVRQLLAANAQLPTELGQKFQLRWFKFSHRPERTRGSDG
                     LGFTGDRSDLAAALDGARRELAALPLAGLILVTDGADNADSALTTTVLSLSAAGVPVY
                     TVGVGAERLPRDLELSRVGAPRAALRGGSVLIEALIQQQGGGTDSAEIVVEDGGRILA
                     TRRFALPGDGQAATIGIPVPLAQAGARNLTVRLPGLPGETVVRNNAREALVTVRDREE
                     RVLYFEGEPRYEFAFLRRGLAADTNLRVVGLQRTAEGKFLRLGVDDSLDLAAGFPRTR
                     EELFRYRAIILGSVEASAFSADQLRMIGEFVGRRGGGLLLLGGRRALAEGAFRDTPLE
                     EVSPFRLDLPGDTTFFRELAVSVTAAGRDHPVTQLASGGAPSPRVWDSLPPLTSVNRL
                     GALKPGATALLAGRDTAGRGDQVVLAFHRYGRGRVVALPVQDTWMWQMHASVTVEDQK
                     YETFWRQLLRWLADDTPDRLDVASLTEEVAPGEAITIEAEVRDRLWQAVNDAAVTATV
                     TGPSGEATELPLDWVVGADGRYRGAFTAREVGEYRVTTAAVNASGAGRTDTLRAEPVF
                     IRAGQVQREFFGAAQRAPLLKRIAEETGGRYYTMQSVSTLPRDIVYTERGVTTTEQLD
                     LWDMPIVFFLLAGLLAGEWTLRRSRGMA"
     gene            4840..5682
                     /locus_tag="VGA78_02895"
     CDS             4840..5682
                     /locus_tag="VGA78_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892838.1"
                     /translation="MLIITGIGGEPKYSQEFTAQARTIIQALQKFRVPSDRITWLAEK
                     EEPPANGRATRDRVEQELVRIAAAAGPGDPLLMVFIGHGSDQSEPRLNLPGPDLTARD
                     LAGLVKGLGERPVALVVAASASGGFVDRLAGPNRLVITATKSGMERNESRFGHWLAQA
                     FAGGAADTDKDGAMSLLEAFSFAAAEVRREYESTNRLLTEHARLSDSALARRFVFSSA
                     GALAQSSDPAVRALQERKRDLEKRIDQLRGRKAQMDSTAYQRDLEALLLELARVNQDL
                     RRKP"
     gene            5679..>7024
                     /locus_tag="VGA78_02900"
     CDS             5679..>7024
                     /locus_tag="VGA78_02900"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9892839.1"
                     /translation="MRVPHRASRTARLLWPLGGSLLLTLVAALPAACQRDTARATIVR
                     PAWDGAIARGQLADAEKLLRAALASGPDMLVAQVRLGELFLLRGQKDSAFRLFGAAVS
                     AYRRSRQMSSGELAAVATGLRALGAEDPARFRDALRVYDEAIAADSGNLDARVALGDL
                     FLEKHNRPDAIATYNAVLAAQPRHPGALLGKARVGLADGEGEALALVRQALEADPEYV
                     PARVALAASHLDRESYQEAEAEAKRALQVNPASLPALTVLAASYLLRGDTAAYQQQRQ
                     RVFQQNPRYATFFAEVAEIQARNRFYREAADYAARGLALDSSDARVLTALGMNQLRVG
                     RVAEGRTHLERAFALDPFNVWVKNTLDLLDATRDYRELQSPRFRYYVAGSEADLLAPY
                     LTELAEAAYDTFALRYGYRPPPPIRVEVYRRHADFSVRTVGLAGLGALGVSFGRVVA"
BASE COUNT         1045 a         2326 c         2485 g         1168 t
ORIGIN      
        1 cgtgctccgc tggaaccccg gcgtcaatgc catggtctac gccggcaacg gctacgcggt
       61 cctgctgccc aactatcgcg gctccaccaa ctacggggag cggcaccggc tcgacatcgt
      121 ggggaactac ttccagaagg gctacgaaga catcatctcc ggtgtcgacg cgctggtggc
      181 gcaggggatt gcccaccccg actcgctggg tgtcatgggg tggagcgccg gcgggcactg
      241 gtccaactgg atcatgaccc agaccacccg gttcaaggcc atttcctccg gcgccggcgc
      301 ggtcaactgg atctcgatgt atgcccagag cgacgtgcag cgcaaccggg ccgagtattt
      361 cgcccggggc aagaagccct gggaagattt cgagtcgtat tggcgggtgt ccccgctgcg
      421 gtatatccgg aacgccaaga ccccgacgct gatccacgtg gtggatggcg atccccgggt
      481 cccgcggccc cagagcgaag aactgcacat ggcgctcaag cagcagggga tcccgaccga
      541 gttcttcgtg tacccgggca ccactcacgg catcccggat gcgcgtaatc agtacctcaa
      601 agccgtggcg gagttccagt ggttcgagaa atggattcgg ggcaaaccgt ggttcgcgtg
      661 gaaggacctg ctcaagacgg tcgacgacgc ggcgggaccg ccgagcgtac ggaccgccgg
      721 caacggagat cagtgactag gccgtccgtc cgcctgtcca tcgtggtggc gttcctggcg
      781 gcggccacca ccggcggcca cgcccaggtg catcgctccc gggcgccgac cgccacctcc
      841 attcgggaag cctatctgga agaagtggcc cggggcacca ccgagaccgt cgaccggctc
      901 aagcgggcgt ttcaggccga caatccggat gactacgtcc gcgagttcac acctggcgga
      961 ctgtactcgc cggccaccgg tgagtcgcgc tacggtgccg ccgccatcaa ggtggcgctg
     1021 ggacggcgga tgccccgctt cggggggatg acgctgacac ggaccgactg gaccgcgagc
     1081 ggcaatctgg cctatacctt cggccgctat ttctacggcc cgatcagcga gggcggggcg
     1141 gtggagcaag ggacctatgt catggtgctc ctgatggaag gccgggaatg gaagatccgg
     1201 tcgtacatcg agcgggttga cccgggacag ggggaatagc cccgccgggg cgctgatcgt
     1261 ggaatacgct tcgctgttcg gtgtcgagcc cacgctcggt cccctggagc aggattaccg
     1321 ccgacactac ctgaaggccg acgcctccca agccaccttc atcctggccg ccaccatcgg
     1381 ggcgctgctg ctcaccaacc tggtcgacct cggcagcgcc ggcttcaccc gggatactgt
     1441 gcgccgactc tgggtgatcg gcacgggtgg cgtggtcacg atcatcatca ttcccttgtt
     1501 gcggcgggtc cagcgggccg cggtactgga cctgctggtc ttcgtctggt cgctggcagt
     1561 cgcgctggtc gtggtctatt tccgaagcac ccatgccccc atcgtgagcg aggcgacggt
     1621 cgcggtgctg gcgctcggct gctacacggt ggtcccgaat cggctgttgt tccgggtgat
     1681 ccccgccttt ctgctcactg ccggcgatgc cagcctgctg tttcgccggc cggagggcgg
     1741 gacctcggcc ggctatgccg tgatcttcgc gtatgggttc atccacctgg taggcatctg
     1801 gtcttcctcc actctgcacc gctttcgccg aaggcagttc gaggccctgg ccggcgagca
     1861 gtccgcgcgg tccgagatgc agcgtctggt tcgcaccgac agcctcaccg gactcatcag
     1921 ccgggcccac ttcatcgagc gggccgagca ggagctggga cggtaccggc ggtacaacac
     1981 gccgttcgcg accctgatcg tcgacctgga tcacttcaag gcggtcaacg atacctacgg
     2041 acacagtgcg ggcgacgagg tgctgcggcg gttcgccgat ctgctccagc gccacagccg
     2101 gagcaacgat ctggtcggaa ggctgggcgg tgaagagttc ggcctgctgt tgccggagac
     2161 ccggctggtg gacgcgcggg aagtcgcggc ccgcattgtg gcggattgcc gtgagctcga
     2221 agtggcggtc gaaagccatc ggctgcggtt caccgtcagc gtgggggtca cggaggcgga
     2281 cccgctcgac ggcggctttt ccgatgtatt gcgacgggcc gatgccgcgc tctatgcggc
     2341 caaacagcag ggccgcgacc gggtggaaac tttgcctcaa ccgccggcgt caagttattg
     2401 atacgccatg ccgttgagtg tcgagtcggt cgtcgagttt ctcttcaagt accgccccgt
     2461 cgtgttcgac aaggggcggt tcgcctttgg ggcgagccag ccggccatgc tggtggccct
     2521 ggggctgctg gggctcgcgc tcacggccgt agtgctcacc tggcggcgtg caccgggaca
     2581 cgcgacgccc cgggcccggg tggccctggt cgcgattcgg gcggtggcac tggctctggt
     2641 gttctggtgc ctgctgcagc ccaccctgct ggtgacgacc gccgttccgc agcgcaacgt
     2701 agttgggatc ctggtggacg attcccgcag catgggaatc gccgacaacg gtcagaccac
     2761 ccgggccgat caggtacggc agttgttggc cgccaacgcg caactcccca ccgagctggg
     2821 ccagaagttt cagctccgct ggttcaagtt ctcgcatcgc cccgagcgga cccgtggcag
     2881 cgatggtctt gggttcaccg gggaccgctc cgatctggcc gccgcgctcg acggcgcgcg
     2941 ccgggaattg gccgcgcttc cactcgccgg gctcatcctg gtgacggacg gggccgacaa
     3001 cgcggattcc gccctcacca ccacggtgct ttccctgtcc gccgccggcg ttccggtcta
     3061 cacggtggga gtcggtgcgg aacggctgcc tcgcgatctg gagctctccc gggtgggggc
     3121 gccccgcgcg gcgctcagag gcgggtcggt gttgatcgag gcgctgatcc agcagcaggg
     3181 gggagggacc gactccgccg aaatcgtggt ggaagacgga ggccgaatcc tcgctacccg
     3241 aaggttcgcg ctcccggggg acggccaggc ggcgaccatc ggtattcccg tgcctctggc
     3301 tcaagccggc gcccggaacc tcacggtgcg gctgcccggc ctgccgggcg agacggtcgt
     3361 ccggaacaac gcccgtgaag ccctggtcac cgtgcgcgac cgggaggagc gggtgctcta
     3421 tttcgaaggg gagccgcgct acgagtttgc gtttctccgg cgcgggctcg ccgctgacac
     3481 caacctgcgg gtggtgggtc tgcagcggac cgccgaaggg aaatttctgc ggctgggcgt
     3541 cgatgacagc ctcgacctgg ccgcggggtt tccccgaacc cgggaagagc tgttccgcta
     3601 tcgcgccatc attctcggca gcgtcgaagc gtcggccttc agcgccgatc aactcaggat
     3661 gatcggcgag ttcgtggggc ggcggggcgg cgggctgttg ctgctgggcg gacgccgcgc
     3721 gctggccgaa ggcgccttcc gcgatacgcc cctggaggag gtgtcaccct tccggctgga
     3781 tctgccgggg gatacgacct tcttccgcga gctcgccgtt tcggtcaccg ccgcgggccg
     3841 ggatcatccc gtcacccagc tggcgtccgg cggagcgccc tcgccgcgag tgtgggattc
     3901 cctcccgccg ctgacctcgg tcaaccggct gggcgcgctc aagccgggcg ccacggcgtt
     3961 gctggccggc cgcgataccg ctggacgagg cgaccaggtg gtgctggcgt tccaccgtta
     4021 tggccggggc cgggtggtgg ctctcccggt gcaggacacc tggatgtggc agatgcacgc
     4081 gtccgtcacg gtggaggacc agaagtacga gaccttctgg cgtcaactgc tgcggtggct
     4141 ggcggatgac acgcccgatc gcctggacgt ggcgtcgctc accgaggaag tggcccccgg
     4201 cgaggccatc accatcgaag ccgaagtgcg ggatcgtctc tggcaagcgg tcaacgacgc
     4261 cgcggtcacc gccaccgtga ccgggccgtc gggtgaggcc accgagctgc cgctcgactg
     4321 ggtcgtgggc gcggacggac gctaccgcgg ggcgttcacc gctcgagagg tgggggagta
     4381 tcgtgtcacc accgcggcgg tgaatgccag cggtgccgga aggaccgata cccttcgggc
     4441 tgagccggtc ttcatccgcg ccggccaggt ccaacgcgaa ttcttcggcg ccgcccaacg
     4501 ggctccgctc ctcaagcgta tcgcggaaga gaccggtggt cgctactaca ccatgcaatc
     4561 ggtgtctacc ctcccgcgcg acatcgtcta caccgaacgg ggggtaacca ccacggagca
     4621 gctggatctc tgggatatgc cgatcgtgtt ctttctgctg gcgggattgc tggccggtga
     4681 atggaccttg cgccggtcgc gggggatggc gtgatccgcg ggatcgcggt cgcgtgtgcg
     4741 cttgcggggg gggttcttcg cttcgctcag aatgacgggc gcttcgctaa gcatggcggg
     4801 ggcttcgctc agaatggcgg gcaagcctcg tcgccctacg tgttgatcat caccggcatc
     4861 ggcggcgagc cgaaatactc ccaggaattc accgcccagg cgcgtaccat catccaggcg
     4921 ttgcagaagt tccgggtgcc gtcggaccgg atcacctggc tggcggagaa ggaagagccg
     4981 cccgctaacg gccgagccac ccgggaccgg gtcgaacagg agctggtccg tatcgcggcc
     5041 gcggccggtc ccggcgatcc actgctgatg gtcttcatcg gccacggcag cgatcagagc
     5101 gagccccgcc tcaatctgcc cggtcccgac ctcaccgctc gggatctggc cgggctggtg
     5161 aagggcctgg gcgaacgtcc ggtggcgttg gtagtggcgg cgagcgccag tggcgggttc
     5221 gtcgaccggt tggccgggcc caatcggctg gtcatcaccg ccaccaagag cggcatggag
     5281 cggaacgaga gccggttcgg gcattggctg gcgcaggcct ttgccggcgg cgcggccgat
     5341 accgacaaag acggcgccat gtcgctgctg gaggcgttca gcttcgccgc cgccgaagtg
     5401 cggcgcgaat acgaatcgac caaccggctg ctgaccgagc acgcccgcct gagcgactcg
     5461 gcgctggctc ggcgtttcgt cttcagtagc gcgggcgcgc tggcccagtc cagcgatccg
     5521 gcggtgcggg ctctgcagga acgaaagcgt gatctcgaga agcggatcga tcagctgcgg
     5581 ggccgcaagg cgcagatgga ctcgaccgcg tatcagcggg acctggaggc gctgctgctg
     5641 gagctggcgc gggtgaatca ggacctgagg cggaagccgt gagagtcccc catcgcgcct
     5701 cgcggaccgc gaggctgctc tggccgctgg gcggttcgct gctgctgacc ctggtggccg
     5761 ccctccccgc cgcgtgccag cgggacacgg ccagagccac catcgtccgt ccggcgtggg
     5821 atggggcgat cgctcggggg cagctggccg acgccgagaa actgctgcgg gccgcgctgg
     5881 cgtcggggcc cgacatgctg gtggcccagg tgcggttggg cgagctgttc cttctgaggg
     5941 gtcagaagga cagcgcgttc cggctgttcg gcgccgcggt gagcgcgtac cggcgctccc
     6001 ggcagatgtc gtccggggag ctcgccgcgg tggcgaccgg tcttcgcgcg ttaggcgcgg
     6061 aagatccggc ccgctttcgc gatgccctgc gggtctatga cgaggccatc gcggccgatt
     6121 ccggtaacct cgacgcccgc gtcgccctgg gcgatctctt cctggagaaa cacaaccggc
     6181 ccgacgccat cgccacgtac aacgcggtcc tcgccgccca accccggcat ccgggagcgc
     6241 tgctggggaa ggcacgggtc gggctggcgg atggtgaagg tgaagccctg gcgctggtcc
     6301 ggcaggcgct ggaagccgat ccggagtacg tgccggcccg ggtcgcactg gccgcctctc
     6361 atctcgaccg ggagtcatac caggaagccg aggccgaggc gaaacgggcc ctgcaggtga
     6421 atcccgcctc gctgcccgcc ctgaccgtgc tggcggcgtc gtacctgttg cggggcgaca
     6481 cggcggccta ccagcaacag cgccagcggg tgttccagca gaacccgcgc tacgccacct
     6541 ttttcgccga ggtggcggag atccaggccc ggaaccggtt ctatcgcgag gccgccgatt
     6601 atgccgctcg cggcctggcg ctcgactcga gcgacgcgcg ggtcttgacc gcgctgggga
     6661 tgaaccagct gcgggtgggc cgggtggcgg agggccgaac ccatctggag cgcgccttcg
     6721 ccctcgatcc gttcaacgtg tgggtgaaga acacgctcga tctgctggac gccacccggg
     6781 attaccgcga gctccagtcc ccccgctttc ggtattacgt cgccgggtcc gaggccgacc
     6841 tcctggcgcc ctatctcacc gagctggccg aagccgccta cgacactttc gccctgcgct
     6901 acggataccg cccgcccccg cccatccggg tggaggtcta ccggcgccac gccgacttct
     6961 cggtacggac cgtgggactg gccgggttgg gggcgttagg cgtgagcttc ggtcgggtgg
     7021 tggc
//
LOCUS       DASWKS010000090         2000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_407840, whole genome shotgun sequence.
ACCESSION   DASWKS010000090 DASWKS010000000
VERSION     DASWKS010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407840"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VGA78_02905"
     CDS             <1..304
                     /locus_tag="VGA78_02905"
                     /inference="COORDINATES: protein motif:HMM:NF023816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="osmoprotectant"
                     /protein_id="HEX9892840.1"
                     /translation="VTRALAADPTILLLDEPGAGLSAGERERLRDLVRRIRASGVTVL
                     LVEHDMDLVMDLADRIVVLNYGEKIAEGTPAEIQNNPEVVAAYLGGDVLEVPAARG"
     gene            467..1228
                     /locus_tag="VGA78_02910"
     CDS             467..1228
                     /locus_tag="VGA78_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015605179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9892841.1"
                     /translation="MTHDGTMLAVEGVVAGYGRVQVLHGVSVQVRRREIVTLNGPNGA
                     GKTTLLNAIMGVVTPRNGQIRLLDRDLVGVGPERMVHLGVGYVPERRQIFASMTVLDN
                     LWLGAYHRLGREEKRYILQEMERVFTIFPVLRERERQVAGTLSGGQQQMLALGRALMA
                     KPDLLLLDEPSLGLAPLVVAEIMRVIAELRRGGMTVLLVEQNAKAALAIADRGYVMEG
                     GRIALEGRAQELLADERVQRAYLGGRGRGARTENP"
     gene            complement(1575..>2000)
                     /locus_tag="VGA78_02915"
     CDS             complement(1575..>2000)
                     /locus_tag="VGA78_02915"
                     /inference="COORDINATES: protein motif:HMM:NF042682.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HEX9892842.1"
                     /translation="PGFLRLWLVTRLRPLRPISLRFAHEHAVISEYLHAVDRYATLDI
                     ELGCAVARLAQVVKGYGNVRRRTLRQFAQVLREIVAPLAEAEVHQRNEFPVTREAVER
                     ARTLLLAQPEGLEPALAAVPPLVERLRTQAAATPALAPR"
BASE COUNT          331 a          590 c          728 g          351 t
ORIGIN      
        1 ggtgacgcga gccctggcgg cggacccgac gatcctgctc ctggatgagc cgggcgccgg
       61 gctgtcggcc ggcgaacggg agcgcttgcg ggatctggtt cgacggatcc gggcctccgg
      121 cgtgacggtg ctgttggtgg agcatgacat ggatctggtc atggatctcg cggaccggat
      181 cgtggtcctg aattacgggg agaagatcgc tgagggcacg ccggccgaga tccagaacaa
      241 ccccgaggtg gttgccgcgt acctgggcgg ggatgtgctg gaggtgccgg ccgcccgggg
      301 gtgatgcgac cgccctccat tggcggaacg aaaaattgga aaccgacaac tgacaaccgg
      361 ccaatgaccg gttgtcggcc tgcgtcgagc tcaggcgaga cgttgtcagc tttccgtttt
      421 ccattgaagg cggaatctgt gtgcatctgt ggttccaggg tttgagatga cgcatgacgg
      481 aacgatgctg gcggtcgagg gggtggtggc cgggtacggc cgggtccagg tcctccacgg
      541 cgtgtctgtc caggtgcgcc ggcgagagat cgtcacgctg aacgggccga acggcgcggg
      601 aaagaccacc ctcctcaacg ccatcatggg ggttgtcacg ccccggaacg ggcagatccg
      661 actcctggac cgggatctgg tgggcgtggg accggagcgg atggttcatc tgggtgtggg
      721 atacgtaccc gagcggcgcc agatctttgc cagcatgacc gtgttggaca acctctggct
      781 cggcgcttac caccgtcttg ggcgcgagga aaaacgatac atccttcagg agatggagcg
      841 ggtcttcacc atctttcccg ttctgcggga gcgggagcgg caggtggcgg gcaccttgtc
      901 gggaggccag cagcaaatgc tggcgcttgg gcgcgccctc atggccaagc ccgacctctt
      961 gctcctcgac gagccctcgt tgggacttgc cccgctggtg gtggccgaga tcatgcgggt
     1021 gattgccgag ctgcggcgcg gtggcatgac ggttctcctc gtcgagcaga acgcgaaggc
     1081 ggcgctggcc atcgccgacc gcggctacgt catggaaggg ggccgcatcg ccctggaagg
     1141 gcgggcgcag gagttactgg cggacgagcg ggtccagcgc gcctacctgg ggggccgcgg
     1201 gagaggggcg agaacggaaa acccgtagga tgtgctgccg tgctgcggtt aggggacgca
     1261 gttaggggac gttgcattat aagtattatt tcctttgacc ctcccgcgcc gacattgcgc
     1321 gccacctcgg ggacgggagt atatatgact tataatgcaa catccccttt tgttcgtccc
     1381 gtcccctttt gttcgtccca accctccggc gggtgcctgc gccaagatgc ctcatgacgc
     1441 tgctggcctg gatccacgcc gcccagtcta atctacccgc tggctgcccg cagtcaagat
     1501 gtcaggaggc gagggtcaat cgcgagcagg actggggtgc cggttcttca tggttgattt
     1561 gtaagggctg gccgctaccg gggcgccagc gcgggagtcg ctgcagcctg ggtgcggagc
     1621 ctttcgacga ggggcgggac ggcggcgagg gcgggctcga ggccctccgg ctgggcgagg
     1681 agcagggtgc gggcccgttc gacggcctcg cgggtcacgg ggaattcatt gcgctgatga
     1741 acttcggcct ccgccagcgg cgccacgatc tcgcgcaaga cctgggcgaa ctgccgcagg
     1801 gtgcggcgcc ggacgttccc atagcctttc acaacctggg ccaggcgggc gacggcacag
     1861 cccaattcga tatcgagcgt cgcgtaccga tccacggcgt gcagatactc cgagatgacc
     1921 gcgtgttcat gggcgaaccg gagcgagatg ggccgcagcg gccgcaggcg cgtcaccagc
     1981 cacaagcgca ggaagcccgg
//
LOCUS       DASWKS010000091         3169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1896111, whole genome shotgun sequence.
ACCESSION   DASWKS010000091 DASWKS010000000
VERSION     DASWKS010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896111"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VGA78_02920"
     CDS             complement(<1..209)
                     /locus_tag="VGA78_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892843.1"
                     /translation="MRTAVSSLELLQPRTLRSALQMLAEGDGIVPLAGATDLYVALNA
                     GTLEGNRFLDLWPLSGLRRIRLDQDV"
     gene            complement(206..631)
                     /locus_tag="VGA78_02925"
     CDS             complement(206..631)
                     /locus_tag="VGA78_02925"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9892844.1"
                     /translation="MRFVLNGRDTDVDPPPMARLLDVLREQCGLTGTKEGCGEGECGA
                     CTVLLDGQAVCACLVPVAQVAGSEVTTIEGLGGDHPLQHAFMDEVGAQCGICTPGMIL
                     AATTLGKRPSMEKIRTGLAGNLCRCTGYAAIYRAVRKAT"
     gene            complement(616..2715)
                     /locus_tag="VGA78_02930"
     CDS             complement(616..2715)
                     /locus_tag="VGA78_02930"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9892845.1"
                     /translation="MGLSVPRKDGIGKATGGAKYADDLTFPGMLYARTIRSTIPCGEL
                     TSVRLDFDPTGFTIVDHRDIPGENAVALLVNDQPCLVERRIRHVAEPVLLLAHADREA
                     LLAARVVLEERPAEPVYDPLVSPQAFKTIRIEKGDLERGFGRADHIIEGTYRTGAQEH
                     VYIEPQGVIAVPEAGGITVYGSIQCPFYVHKALVLLLGNAVRRVRVVQTETGGGFGGK
                     EEYPSMIAGHAALLALKSGRPVKLIYDRAEDMLATTRRHPAIVRHRTGVTRAGRLVAM
                     EVEVMLDGGAYVTLSPVVLSRGAIHAAGPYRCDHVRIDARAMFTNTPPNGAFRGFGAP
                     QTQFAVEVHLDRIAEALDLDPVQLRERNALRPGDTTATGQTMGQDTSALEVLRTAVRR
                     AGYRRKRKAFAGSNRGIGLALYWHGSGFTGSGELKLASRAALELTPTGVRVLTSSTEI
                     GQGTRTMHAQIVADTLGIPYHDVDVATPDTGLVPDSGPTVASRTCMVVGRILQRAAQQ
                     IRATLGDLTPAQYFERHGPLTVTEQYVQPEWIRWDEEHYQGDAYATYAFGCDVAEVEF
                     DRDTWEVRPRKLTVVNDIGKAIHPALATGQIEGGSVQGLGWALLEHVVIRDGAMANAQ
                     LTNYLIPTTSDTPPLDVTILENPYGDGPFGAKGLGELPIDGPAPAVVNAIRYLGFDLR
                     EVPALPETIQEAGCVSS"
     gene            2971..>3169
                     /locus_tag="VGA78_02935"
     CDS             2971..>3169
                     /locus_tag="VGA78_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HEX9892846.1"
                     /translation="MLTERSRRIWAASEAAALGHGGIGLVETATGISRSTISRGLREL
                     ETGEPLPAERTRRPGGGRHRAA"
BASE COUNT          488 a         1061 c         1119 g          501 t
ORIGIN      
        1 acgtcctggt cgagcctgat gcgacggagc ccgctcagcg gccagagatc gagaaagcgg
       61 ttgccttcca gtgtgccggc gttgagcgcc acgtagaggt cggtcgcccc ggccagcgga
      121 acgatcccgt ctccctccgc cagcatctgg agagcgctcc gcagggttct gggctgcagc
      181 agctcgagcg aagagaccgc ggttctcatg tcgccttccg caccgcgcga tagatcgccg
      241 catacccggt acagcggcag agattgccgg ccaggccggt tcggatcttt tccatcgaag
      301 gccgcttccc caaggtggtg gcggccagga tcatgcccgg agtgcagata ccgcattggg
      361 ccccgacttc gtccatgaac gcgtgctgca gcgggtgatc cccgcccagg ccttcgatgg
      421 tggtgacctc gctgccggcg acctgtgcca ccggcaccag gcaggcacac accgcctggc
      481 cgtccagcag cacggtgcag gccccacatt caccctcgcc gcagccctcc ttggtgccgg
      541 tgagcccgca ctgctcccgg agaacatcga gcagccgcgc catcggcggt gggtcgacgt
      601 cggtgtcgcg gccattcagg acgaaacgca tccggcttcc tgaatggtct ccggcagggc
      661 cgggacttcg cgaagatcga agccgagata gcgaatggca ttcacgacgg cgggcgcggg
      721 gccgtcgatc ggcagctcgc ccaggccttt ggcgccgaag ggtccgtcgc cgtaggggtt
      781 ctccaggatg gtcacgtcga ggggcggcgt gtcggaagtg gtggggatca aatagttggt
      841 gagttgggcg ttggccattg cgccgtccct gatcaccacg tgctccagca gggcccagcc
      901 caggccctgc accgatccgc cctcgatctg gccggtggcc agggccgggt gaatggcttt
      961 gccgatgtcg ttcaccaccg tgagcttgcg gggccggact tcccaggtat cccggtcgaa
     1021 ctcgacctcc gccacatcgc agccgaaggc ataggtggca taggcatcgc cttgatagtg
     1081 ctcctcgtcc caccggatcc attcgggttg gacatactgc tcggtcacgg tgagcgggcc
     1141 gtgacgctcg aagtactggg cgggggtcag gtcgcccagc gtggcccgga tctgctgggc
     1201 ggcccgctgg agaatgcgac ccaccaccat gcaggtgcgg gacgcgacgg tgggaccgct
     1261 gtcgggcacc aagccggtat ccggggtcgc gacgtccacg tcgtggtaag ggattcccag
     1321 cgtatcggcc acgatctggg cgtgcatggt gcgggtgccc tggccgatct cggtgctcga
     1381 ggtgagcacc cgcactccgg tcggggtcag ctccaacgca gctcgcgacg ccagcttgag
     1441 ctcgccgctg ccggtgaacc ccgacccgtg ccagtagagc gccaggccga tgccccggtt
     1501 gctgccggcg aaggcctttc gcttgcggcg gtacccggcg cggcgcacgg cggtgcgaag
     1561 gacctcgagg gcgctggtat cctggcccat ggtctgtccg gtggccgtcg tgtcccccgg
     1621 gcgaagcgcg ttcctctccc gcagctggac cgggtccaga tccagggctt cggcgatccg
     1681 gtccaggtgc acttcgaccg cgaactgagt ctggggcgcg ccgaagccgc gaaacgcgcc
     1741 gttaggcggg gtgttggtga acatggcgcg ggcgtcgatc cggacgtggt cgcagcggta
     1801 gggcccggcc gcgtggatgg ccccgcggga gagcaccacc ggcgacaggg tgacgtacgc
     1861 gccgccgtcg agcatcacct ccacctccat cgcgaccagc cggccggcgc gggtgacgcc
     1921 ggtgcgatgc cgcacgatcg ccggatggcg ccgggtcgtg gccagcatgt cctccgcccg
     1981 gtcgtagatc agcttgaccg gacggcccga cttgagcgcc agcagcgcgg cgtggcccgc
     2041 gatcatggag gggtattcct ccttaccgcc gaagccgccg ccggtctcgg tctggaccac
     2101 ccgcacccgg cggacggcgt tgcctaacag cagcaccagc gccttgtgga cgtagaaggg
     2161 acactggatc gagccgtaga ccgtgatccc gcccgcctcg ggcaccgcga tgacgccctg
     2221 gggctcgatg tagacgtgct cctgggcgcc ggtgcgatag gtcccctcga tgatgtggtc
     2281 ggcccggccg aatccccgct cgaggtcgcc cttctcgatg cgaatggtct tgaaggcctg
     2341 gggagagacc agcgggtcat agaccggctc agccggccgt tcctcgagca ccacccgggc
     2401 ggcgagcagg gcctcccgat cggcatgggc cagcaacagc accggctcgg cgacatgccg
     2461 gatccggcgc tcgaccaggc agggctggtc gttcaccagc agtgccacgg cattctctcc
     2521 cgggatgtcg cggtgatcga cgatcgtgaa gccggtgggg tcgaagtcga gccggaccga
     2581 ggtgagctca ccgcagggga tcgtgctgcg gatggtccgg gcgtagagca tgcccgggaa
     2641 ggtcaggtcg tcggcgtact tcgccccgcc ggtcgccttg ccgatgccgt ccttccgggg
     2701 gacgctcagg cccacggcag cgagttgcga cctcgggggt tctgacatga tgatccgcag
     2761 agtacgcaga ttacgcagaa gtgccaagcc accggtcgaa cggccgtcct ccggtccgtc
     2821 caccatgaag ggaccgaggc gcggcccgcg tgggccaccg tcactaaggg attgtgaaga
     2881 aataactgat tgatttacga cgggcgcatt gtagattgat ggggtggagc tcagcacgcg
     2941 ctgcgtcgca cgtaccgagc gctccgaccc gtgttgaccg agcgatcgcg gcgcatctgg
     3001 gccgccagtg aagccgccgc gctcggccac ggcggcatcg gtctcgtgga aaccgccacg
     3061 gggatttcgc gctccacgat cagccgcggc ctgcgggaac tcgagaccgg tgagcccctg
     3121 cccgcggagc gaacccggcg tccgggcggg gggcgacacc gggcggcgc
//
LOCUS       DASWKS010000092         4839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3004667, whole genome shotgun sequence.
ACCESSION   DASWKS010000092 DASWKS010000000
VERSION     DASWKS010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3004667"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VGA78_02940"
     CDS             complement(<1..371)
                     /locus_tag="VGA78_02940"
                     /inference="COORDINATES: protein motif:HMM:NF037651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit beta"
                     /protein_id="HEX9892847.1"
                     /translation="MAIMAWFKKERKPKPAQRERLEIPPDAWEKCPKCGHLDLKARFQ
                     KSLNVCPECGYHFRLSAEEYIELLTDPGSWRELWGDLRSLDPLEFEGYAGRIDASEAK
                     AGKSDAIYTGAGRLDGLPLNLG"
     gene            complement(532..1770)
                     /gene="rodA"
                     /locus_tag="VGA78_02945"
     CDS             complement(532..1770)
                     /gene="rodA"
                     /locus_tag="VGA78_02945"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEX9892848.1"
                     /translation="MRGQSLDRPLLLEAFLLTGFGLLMLYSAGQTDAPTNAVGVWTRQ
                     LVWAGAALVAGAVAFRISPRIIEWLAPGVYLFSLLLLVLTLVIGTGAGSAAGTKSWIA
                     LGGVRLGQPAELAKLGTILFLAHYLSNLREPPDSLRRLIPACLIAGVPTFLVLAQPDL
                     GSAIVFVGILFAMLFWAGVRPALLLLLASPAISLLLAANTALWAVWMILLFVVLVAWR
                     IYISEGVLVYLVNSAMGIVAFILWNKLKPYQQRRFQSFLNPDIDPGGASYQAIQSKVA
                     HGSGGLFGSGYTQGPQKRLAFLPEQHTDFIFPVVGEELGFLGVTAALGLYLIFFLTLL
                     RIARRATDPFGGLIVFGVLGLLFTHMWENIGMTVNVMPITGIPLPFFSYGGSFLLTCG
                     VAIGLVLRVAWEARGAGYPD"
     gene            complement(1767..3608)
                     /gene="mrdA"
                     /locus_tag="VGA78_02950"
     CDS             complement(1767..3608)
                     /gene="mrdA"
                     /locus_tag="VGA78_02950"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX9892849.1"
                     /translation="MSSNAAQRTRERADQFRWVLFLAFLVLSGAFFRIQVLQVEEYRL
                     RSESNRLRALPLAAPRGPLLDRNGLVVADNIPGYTVKLLAPSADSLRAVLSRLGGIVA
                     LDSGTVEQVVRRWRGARYQPALVFNSMSFDVVARLEEHRQSLPGLVIQTEPRRYYPAG
                     PAVAHVVGYVGEVSEGDLERNRYPGARLGTIVGREGLEQQYDSVLRGREGLKYVEVNA
                     RGAMVREEVSTPSITPEPGRPLRITLDLPLQLYIDSLWTDSLRQFRGAMVAMTPEGEI
                     LALYSWPTFDPNDFVGGIAAAKYRALTSDSSGLPLYNRAIKGAYPPASPFKLATAAMA
                     LRRGLVNFSTHMDQPCRGGYRFGNRVFKCWKKEGHGSLDLTGAITASCDVYFYQLGLK
                     LGLERMLEDGVAFGFRERTGIDVGSETRSFYPPSRDYYNKAYGPRGWTNAVTLNLAIG
                     QGENSQTLINVMRFYQALAGDGTAHTPRFVSASDPGPKSLGLTPPQLAGLRDAMIAVV
                     QRGTAAGSRGKDLNVAGKTGTAQNPHGADHGWFIAFAPADHPQIIVGSIMEKALHGSS
                     VAPWVVRVIRRYLEGAGARPDAPIEIVLPQDSAPRVEVLPDTAGTRP"
     gene            complement(3605..4099)
                     /gene="mreD"
                     /locus_tag="VGA78_02955"
     CDS             complement(3605..4099)
                     /gene="mreD"
                     /locus_tag="VGA78_02955"
                     /inference="COORDINATES: protein motif:HMM:NF016019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEX9892850.1"
                     /translation="MNSRRGAWPLWLILGLLVLLHFYLRPRLYAGRGAPDFLLLALLI
                     ASFRSRPGTAAVAGFLVGLVDDVLTPAHFGAGMMAHTVVAYLAAWGRSVFFADNLLVN
                     AGLFATGTLLRNVLVLVFSGGGAAALLASVTFWGVMQSITTALAGTLVVLGIRHRVDF
                     RLEE"
     gene            complement(4096..>4839)
                     /gene="mreC"
                     /locus_tag="VGA78_02960"
     CDS             complement(4096..>4839)
                     /gene="mreC"
                     /locus_tag="VGA78_02960"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEX9892851.1"
                     /translation="MIGALTSSIRDTALLPLIWLQQRAEEGRTSRARFRAALAERDSA
                     AMRAHEAPALRAENERLRALLDIRGRFGSGYLAAEVLRQTMPTDGRTLLLSVGARQGA
                     RVFQPVITVEGLVGVISRVGPTSALATTWAHPEFRVSAVTEDGSVLGIVAPSANREPS
                     LTVLEFRGVAYRDTVPDGTRVMTAGLGGVFPRGIPIGVVRGVRREELGWERIYLLLPF
                     ANPGLASHVLLVTSASDTAGPVSLTDSLP"
BASE COUNT          907 a         1645 c         1586 g          701 t
ORIGIN      
        1 cccagattca gcggcagccc gtcaagccgg ccggcaccag tgtaaatcgc gtccgacttg
       61 ccggccttgg cttccgaagc gtcgatccgg ccggcgtagc cctcgaactc cagcgggtcg
      121 agcgaccgga ggtcacccca cagctcgcgc caactccccg gatcggtcag cagctcgatg
      181 tactcctcgg cgctcaaccg gaaatggtaa ccgcactcgg gacaaacgtt gagagacttc
      241 tggaatctgg ctttgaggtc cagatggccg cacttgggac acttctccca agcgtcggga
      301 gggatctcca gacgttcgcg ctgagccggc tttggcttcc gttctttctt gaaccaggcc
      361 atgatagcca tatgggtagc gaaagtgtgg agtgtgacct acagcacatg caatttggtc
      421 acgccgggcg attggcgcta gatacggtat ggtaagtact tcaggactaa tgacttatgg
      481 ctaaagagta agtaaccgaa gcgcttagca catagtccgt agaccttagc cctagtcggg
      541 gtaccccgct ccccgggcct cccaggcaac ccggagcacc agcccgatcg cgaccccgca
      601 ggtcagcagg aaggaccctc cgtagctgaa gaacggcagc ggaataccgg tgatgggcat
      661 gacattcaca gtcatcccga tgttctccca catgtgggtg aagagcaggc ccaggacccc
      721 gaatacgatg agcccgccga agggatcggt agcccgccgg gcgatccgga gcagggtgag
      781 aaagaagatc aggtacaagc ccagcgctgc ggtcaccccc agaaacccca gctcctcccc
      841 caccacgggg aagatgaaat cggtgtgctg ctccgggagg aacgccagcc gcttctgcgg
      901 gccctgggtg tagccgctgc cgaacaggcc acccgacccg tgggccacct tggattggat
      961 cgcctggtag gaagcgcccc cggggtcgat gtcggggttg aggaacgact ggaagcggcg
     1021 ctgctggtac ggcttgagct tgttccacag gatgaaggcc acgattccca tggcggaatt
     1081 caccaggtag accagcacgc cttccgagat gtagatccgc caggccacca gcacgacaaa
     1141 gaggaggatc atccagacgg cccagagggc cgtgttggcc gccagcagca ggctgatggc
     1201 cggcgaggcg agcaacagca gcagggccgg cctgaccccg gcccagaaca gcatggcgaa
     1261 caggatgccg acgaagacga tggcactgcc cagatcgggc tgagccagca ccaggaaggt
     1321 ggggaccccg gcgatcaggc aggcggggat gagccggcgg aggctgtcgg gaggctcacg
     1381 cagattggag aggtagtgag ccagaaacag gatggttccg agcttggcca gctcggccgg
     1441 ctgtcccagg cgtaccccac cgagggcgat ccagctcttg gtccccgccg cagaaccggc
     1501 ccccgtgccg atgaccagcg tgagcaccag cagcaggaga gagaacaggt acacgccggg
     1561 tgccagccac tcgataatcc ggggcgatat ccggaaggct actgccccgg cgaccagggc
     1621 ggcgccggcc cataccagct gccgggtcca gacccctacc gcgttggtcg gcgcatcggt
     1681 ctggccagcc gagtacagca tgagcaggcc gaacccggtc agcaggaacg cttccagcag
     1741 cagcggccga tccagcgact gccctctcac ggccgggtcc ccgcggtatc gggcagcact
     1801 tcaacccgcg gggccgagtc ctgcggcagc acgatctcga tcggagcgtc gggtcgagcg
     1861 ccggcgcctt ccaggtagcg tcgaatcacc cgtaccaccc agggtgccac cgacgagccg
     1921 tgcagcgctt tctccatgat gctgcccacg atgatctggg gatggtcggc cggagcaaag
     1981 gcgataaacc agccgtggtc ggccccgtgc gggttctgcg ccgtgcccgt cttaccggcc
     2041 acgttcaggt ccttcccgcg cgacccggcc gcggtcccgc gctgcaccac cgcgatcatc
     2101 gcgtcgcgga ggccagccag ttgcggcggg gtgagtccca gcgacttggg gccgggatcg
     2161 ctcgccgaca cgaaccgggg ggtatgcgcc gtgccgtccc ccgccagcgc ctggtagaag
     2221 cgcatgacgt tgatcagcgt ctgactgttc tctccctgcc cgatcgccag gttgagcgtc
     2281 acggcgttgg tccagcccct gggcccgtag gccttgttgt agtagtctcg tgagggagga
     2341 tagaaggacc gggtttcact ccccacatcg atgccggtcc gttcccggaa cccgaatgcg
     2401 actccatcct ccaacatgcg ttccagaccc agcttgagcc ccagctgata gaagtacacg
     2461 tcgcagctgg ccgtgatggc tccggtcaga tcgagcgagc cgtgcccttc cttcttccag
     2521 cacttgaaga cccggttgcc gaagcggtat cccccccggc agggttggtc catgtgagtg
     2581 gagaagttca ccagcccgcg tcggagcgcc atcgccgcgg tggcgagctt gaagggggac
     2641 gccggaggat aggcgccctt gatggcccgg ttatagagcg gcagaccgga gctgtcggag
     2701 gtgagcgccc ggtacttggc ggccgcgatg ccgcccacga aatcgttggg atcgaaggtg
     2761 ggccaggagt agagcgccag gatctctccc tccggcgtca tggccaccat ggccccccgg
     2821 aactgccgca gcgagtcggt ccacagcgag tcgatataga gctgcagcgg cagatcgagc
     2881 gtgatgcgga gcgggcggcc cggctcggga gtgatcgacg gagtggacac ctcctcccgt
     2941 accatcgcgc ctcgagcgtt cacctcgacg tacttgagtc cctcccggcc tcgcaggacg
     3001 ctgtcgtact gttgctccag tccctcgcgg cctacgatgg tgcccagtcg cgcgcccggg
     3061 taccggttgc gctcgaggtc gccttccgac acctcgccca catagccgac cacatgcgct
     3121 accgccgggc cggcgggata gtagcgccgc ggctcggtct ggatgaccag gcccggcaag
     3181 gactgacgat gctcctccag ccgggccacc acatcgaacg acatgctgtt gaagaccagg
     3241 gccggctgat agcgggcccc ccgccagcgg cgcaccacct gttccaccgt gccactgtcg
     3301 agcgccacga tcccgcccag gcggctcagc accgcccgga gggagtcggc cgatggcgcc
     3361 agcagcttga cggtgtagcc ggggatgtta tcggcgacca ccagaccgtt ccggtccagc
     3421 agcggaccgc gcggagcggc cagaggcaga gcccggagcc ggttggactc cgaccgcagc
     3481 cggtattctt ccacctgcag gacctggatc cggaagaagg cgccggacag caccaggaag
     3541 gccagaaaca gcacccagcg aaactgatcc gcccgctcgc gagtccgctg ggccgcgttg
     3601 gagctcattc ttccagccgg aagtcgaccc ggtggcgaat cccgagcact accaacgtgc
     3661 ctgcgagcgc ggtcgtgatc gactgcatga caccccagaa cgtcaccgaa gccagcaggg
     3721 cggcggcccc tcccccgctg aacaccagca ccagcacgtt ccggagcagc gtgccggtcg
     3781 cgaacaggcc ggcgttcacc agcaggttat ccgcaaagaa caccgaccgg ccccaggccg
     3841 ccaggtacgc cacgaccgta tgggccatca tccccgcccc gaagtgcgcc ggggtcagga
     3901 cgtcgtcaac cagacccacc agaaacccgg ccacggctgc cgtgcctggg cggctacgga
     3961 acgaagcgat cagcagggcg agcagcagga aatcgggagc accacgtccg gcgtaaagcc
     4021 ggggccgcag gtagaaatgc agcaggacca ggaggccgag gatcagccaa aggggccacg
     4081 ccccgcgtcg ggaattcacg gcagcgagtc agtcagtgac accggtcccg cggtgtccga
     4141 agccgacgtg accagcagca cgtgactggc caggcccgga ttggcgaatg gcagcaggag
     4201 gtagatccgt tcccacccca gctcctcccg ccgcactccc cgcaccacgc cgatgggaat
     4261 gccacgggga aacacccctc ccagacccgc ggtcatcacc cgggttccgt ccggcacggt
     4321 atcgcgatac gccacgccgc ggaactcgag cactgtgagg ctgggttccc ggttcgcgga
     4381 tggcgccacg attccgagga ccgagccgtc ttcggtgacc gcactcaccc tgaattccgg
     4441 gtgggcccag gtggttgcca gcgcggaggt gggtcccacc cgggatatca cgccgaccag
     4501 accctcgacc gtgatcaccg gctgaaagac ccgggcgccc tgccgcgccc cgaccgagag
     4561 cagcagggtg cgaccatcgg tgggcatcgt ctggcgcagc acttcggccg ccaggtatcc
     4621 gctgccgaac cgtccccgga tgtcgagcag ggcccgcagc cgctcgttct cggcccggag
     4681 ggcgggagcc tcgtgggccc gcatggcggc ggaatcgcgc tccgccagcg ccgcccggaa
     4741 ccgggcccgg ctggtgcgtc cttcctcggc ccgctgctgg agccagatca gcgggaggag
     4801 cgcggtgtca cgaatggatg acgtcagcgc cccgatcat
//
LOCUS       DASWKS010000093         5795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2628243, whole genome shotgun sequence.
ACCESSION   DASWKS010000093 DASWKS010000000
VERSION     DASWKS010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5795
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2628243"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1397)
                     /locus_tag="VGA78_02965"
     CDS             complement(<1..1397)
                     /locus_tag="VGA78_02965"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9892852.1"
                     /translation="MVTGLRPLHRKVVRDLWHLRSQMLAVAVVMACGISMFVALRSMH
                     RWLREAQADYYASYRFADVFAHVRRAPATLAAEIARLPGVTGVRVRVVADVTLDVPGL
                     DEPASGRLISIPEQRSPILNDLHLRRGRWITGAAGEVIVSQAFAQANGLELGDRLPAV
                     LNGRWQRLRIVGLAQSPEYIYEIRGLGDIFPDARRFGVLWMGERAMDAAYRMEGAFND
                     LSLTLGADAVSRDVIAALDRRLAPFGSAGAYPRADQLSHQFVSSEIEETRVTSVLLPS
                     IFLAVTAFLLHMVLARLVATQRDQIAVLKAFGYGNGTIALHYFQLALGPILLGTAAGV
                     ALGLWFAGGLAGVYARFYQFPAAVFRPDWGVVGASFGVSAGAALIGAISSVARAVRLP
                     PAEAMRPEAPATFRPGPVERLGLERLASPASRMILRNVERRPLKATLSALGIALATAT
                     VVTGWWMFDAVDVLK"
     gene            complement(1391..2113)
                     /locus_tag="VGA78_02970"
     CDS             complement(1391..2113)
                     /locus_tag="VGA78_02970"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9892853.1"
                     /translation="MGVAAAVRPVFEARGLSKVYRTGEVDVVALRHVDLELLPGEFVV
                     ILGPSGSGKSTLLNILGGLDIPTSGSVNFLDHDLTVDDDRALTRFRREHVGFVFQFYN
                     LIPSLTALENVALVTDLAEAPMDPAEALRLVGLGDRINHFPAQLSGGEQQRVAIARAV
                     AKRPDVLLCDEPTGALDYETGLRVLEVLEQVNRDLGTTVAIITHNAAIAAMADRVIRM
                     RSGTIVEVSRNPRRAAPSEIEW"
     gene            complement(2455..3375)
                     /locus_tag="VGA78_02975"
     CDS             complement(2455..3375)
                     /locus_tag="VGA78_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HEX9892854.1"
                     /translation="MTGSPLFWLVLALSLPVSPSVRLSAQQVSDSGFRPTVSSPAFAT
                     GRGPAVLLDEAHFNFHTTTGRYLAFVRLVEHDGFVVRANHSPFSAAALKDARILVIAN
                     ALADTGEWVLPARPAFTSAEVAAVREWVRGGGSLLLIADHMPFPGAAESLAQTFGVEF
                     SNGFAMDSTGREGMAVFRRREGTLAPHPITDGRAGGERIDSVRSFTGQAFRLTGPGTP
                     LLTLDSSFVNFLPARAWEFSAATQRHSAKGMLQGAAIDYGRGRMAVFGEAAMFSAQLS
                     GPQRLPMGMNRPDAPQNAQFALNVMRWLAQ"
     gene            complement(3424..5103)
                     /locus_tag="VGA78_02980"
     CDS             complement(3424..5103)
                     /locus_tag="VGA78_02980"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEX9892855.1"
                     /translation="MNPRRIGWAGLVALLLVGCRPEAGGAGAAETIHPDSLLAKIRVL
                     ASDEFEGRGPGTPGEEKTVQYLTRQFQQLGLTPGNPDGSWTQQVGMVGITTTPEVSFT
                     ARGRPVPMRVPDDIVVATLRHVNQVQIPASDVVFVGYGIEAPEYQWDDWKGVDVRGKV
                     VIMLVNDPPIVSSSDSTRLDDAVFRGKAMTYYGRWTYKYETASARGAAAAIIVHEEGP
                     AGYPYAVVVGSRGRENIDIARADSNRGRVPIEGWIHLDRARALFTAAGQDFDALKRAA
                     LTREFRPVPLDAKASIRAKVALRSFSSQNVVARLEGADPAVRDEYVIYSAHWDHLGRD
                     TTIAGDQIYNGALDNASGTAGMLEIARAFSSLREKPRRSILFLAVTAEEKGLLGAQYY
                     AENPLYPLSRTVADINIDGVNQWGRTSDLTLVGYGNSTLDSLLGEAAAGQGRVIKPDA
                     EPEKGYFYRSDHFEFAKKGVPALYTHSGIEYLEKPAGYGLEKRQRYVADDYHKPSDEI
                     KPDWDLSGAVEDLRLFFQVGLSLANGTTWPEWKPGTEFKAVRDSALQAKTD"
     gene            complement(5113..5229)
                     /locus_tag="VGA78_02985"
     CDS             complement(5113..5229)
                     /locus_tag="VGA78_02985"
                     /inference="COORDINATES: protein motif:HMM:NF028380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein THX"
                     /protein_id="HEX9892856.1"
                     /translation="MGKHDRKSFRGKLLRGTYGKRRPHKNKKKTVSTKQAQG"
     gene            5413..5742
                     /locus_tag="VGA78_02990"
     CDS             5413..5742
                     /locus_tag="VGA78_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892857.1"
                     /translation="MSRIPRWTPTAAILALLAVSSSSAQSTNERKGFWIGFGLGFGNL
                     SCGDCPNEPGGGFSGHLKLGGTPSRKVLVGFESMFWVKEDDDLDATLSYGNASAIVQF
                     AVGLTWH"
BASE COUNT          956 a         1997 c         1910 g          932 t
ORIGIN      
        1 tccttcagca cgtcgaccgc gtcgaacatc caccatccgg tgaccacggt ggcggtggcc
       61 agcgcaatgc ctaacgccga cagcgtagcc ttgagcggcc tccgctccac gttgcgcagg
      121 atcatccggc tcgcgggcga cgccagccgc tcgagtccca gccgttccac cggaccgggc
      181 cgaaaggtgg cgggggcttc gggacgcatg gcttcggcgg gagggagccg gaccgcgcgg
      241 gccacgctgg agattgcgcc gatcagagcg gcccccgcgc tcacaccgaa ggaagcgccg
      301 accactcccc agtccggcct gaagaccgcc gcgggaaact ggtagaaccg ggcgtagacg
      361 ccggccagtc cgccggcgaa ccagagtccc agagccacac cggccgcggt cccgagcagg
      421 atcggtccca gggccaattg gaagtaatgc agggcgatgg tgccgttgcc gtagccgaag
      481 gccttgagca ccgcgatctg gtcccgctgg gtggcgacca gccgggccag caccatgtgc
      541 agcaggaatg ccgtgacggc cagaaagatc gagggcagca ggacactggt gaccctggtt
      601 tcctcgattt cgctggacac gaactggtgc gacagctgat cggcccgcgg gtaggctccg
      661 gcgctgccaa agggcgcgag ccgccggtcg agggcagcga tgacgtcgcg gctcacggcg
      721 tcggcaccaa gcgtcagcga gagatcgttg aacgcccctt ccatccggta ggctgcgtcc
      781 atcgcgcgct cgcccatcca gagcacgccg aaccgcctgg cgtccggaaa gatgtcgccc
      841 agaccgcgga tctcgtagat gtattccgga gactgggcca ggcccacgat gcggagccgc
      901 tgccagcggc cgttgagaac cgccggcagc cggtcgccca gctccagccc attggcttgc
      961 gcgaacgcct ggctcacgat cacctcgccg gcggcgccgg tgatccagcg gccccgccgg
     1021 agatgcaggt cgttcaggat cggcgaacgc tgttcgggga tggagatgag acgtcccgag
     1081 gccggctcgt cgagcccggg cacatccagc gtcacgtcgg ccaccacccg cacccgcacg
     1141 ccggtgacac ccggcagccg ggcgatctct gccgccaggg tcgccggcgc gcggcggaca
     1201 tgggcgaaca cgtcggcgaa ccggtagctc gcgtagtagt cggcctgggc ctcccgcagc
     1261 cagcggtgca tgcttcgcag cgcgacgaac atggagatcc cgcaggccat gacgaccgcg
     1321 accgccagca tctgactccg gagatgccag agatcacgca ccaccttgcg gtgcagtgga
     1381 cgcaggccgg tcaccattcg atctccgagg gcgcggcccg cctggggttc cggctcacct
     1441 ccacgatggt accgctccgc attcgaatca cccggtcggc catcgcagca atggcggcgt
     1501 tgtgggtgat gatcgcgacc gtggtcccga ggtcgcgatt gacctgctcc agcacctcca
     1561 gcacccggag gccggtttcg tagtcgagcg ccccagtcgg ctcgtcacag agcagcacat
     1621 cggggcgctt ggcgaccgcc cgggcgatgg cgacgcgctg ctgttccccg cccgacagct
     1681 gggccggaaa gtggttgatc cggtcgccca gccccaccag gcggagtgcc tccgccgggt
     1741 ccattggggc ctcggccaga tcggtcacca gcgccacgtt ctccagcgcc gtcagggaag
     1801 gaatcaggtt gtagaactga aagacgaagc cgacgtgctc acggcggaag cgggtgagag
     1861 cccggtcgtc gtccaccgtc aggtcgtggt cgaggaaatt gaccgagccc gaggtcggga
     1921 tgtccagccc gcccaggata ttcaggaggg tcgacttccc gctgcccgat gggccgagga
     1981 tgacgacaaa ctcccccgga agaagctcca ggtccacgtg gcgcaacgcg accacgtcga
     2041 cctcgccggt ccggtagact ttgctgaggc cccgggcctc gaagacgggt cgaaccgctg
     2101 ccgcaacgcc cacgctttcc tccgcctgca gactaggcag cgggcggaga gaactcgatg
     2161 aaggtttggt gaaaggcgct tcaggcgacg acgccgaatc tgcagttcat cttccgcacg
     2221 atttcacatc ccccttaggg accggatcct accttggcct ccagcgtgag gcatggggca
     2281 tcaagggaag gccaccggat gcccgatacg catccgctcc gcctcacgtg gtcatagaag
     2341 tcgcagtggg tcgcagtggg tcggagaggg ccgaggaaac cgggtgtctg aagaggaggg
     2401 acagtccccc ggctcacctt cgaccctctt cgactgcctc gaccccttcg accgttattg
     2461 cgccagccag cgcatgacgt tgagcgcgaa ctgggcgttt tggggtgcgt ccggccggtt
     2521 catccccatc ggaagccgct gcggaccact taactgggcg ctgaacatcg ccgcctcccc
     2581 gaacaccgcc atccggcctc gtccgtaatc gatcgccgcg ccctgcagca tgcccttcgc
     2641 ggaatggcgc tgggtggcgg cgctgaattc ccaggcgcgg gccggcagga aattcacgaa
     2701 gctcgaatcg agggtcagca gaggagtgcc cggcccggtc aggcggaagg cctgcccggt
     2761 gaacgaccgc accgaatcga ttcgctcgcc cccggctcgg ccgtcagtga tcggatgcgg
     2821 ggccagggtg ccctcgcgcc gccggaacac ggccatcccc tctcggcccg tcgagtccat
     2881 cgcaaaaccg ttgctgaact cgacgccgaa ggtctgagcc agtgactcgg ccgcgccggg
     2941 aaacggcatg tggtcggcga tcaacagcag cgagccgccg ccccgcaccc actcccgtac
     3001 cgcggcgacc tcggcggacg tgaacgcggg ccgggcgggt agcacccact ccccggtatc
     3061 ggccagcgcg ttcgcgatca ccaggatgcg agcgtccttg agagccgccg ctgagaaggg
     3121 ggagtggttg gctcgcacca cgaagccgtc gtgctccacc agccgcacga aggccaggta
     3181 gcggccggtg gtggtgtgga agttgaagtg cgcctcgtcc agcagcaccg ccggccctcg
     3241 cccggtcgcg aacgccggtg aggaaaccgt aggccggaac ccggaatcac tcacctgctg
     3301 ggcggacaga cggaccgacg gactgacggg cagtgacaaa gccagcacca accagaagag
     3361 aggactcccg gtcatcagcg atccccggta ggcggtccgt cagtccgtca gtccgtcagt
     3421 ccgtcagtcc gtcttggcct gcagtgccga gtcccgcacc gccttgaact ccgtccccgg
     3481 cttccattcc ggccaggtgg ttccgttggc caggctgagc cccacctgga agaacaatcg
     3541 caggtcctct accgccccgg agaggtccca gtcgggtttg atctcgtcgg acggcttgtg
     3601 atagtcgtcg gcgacgtagc gctggcgctt ttccaggccg tagcccgccg gcttctccag
     3661 gtactcgatg ccgctgtggg tatagagggc cggcacgccc ttcttggcga actcgaagtg
     3721 gtcggagcgg tagaagtagc ccttctcggg ctcggcgtcg ggcttgatca ctcgcccctg
     3781 gcccgcggcc gcctcgccca gcaggctgtc gagggtcgag ttgccgtatc ccaccagggt
     3841 caggtcgctg gtgcggcccc actggttcac cccgtcgata ttgatgtcgg ccacggtgcg
     3901 ggacagcgga tacagcggat tctcggcgta gtactgggcg cctaacaggc ccttctcctc
     3961 ggccgtcacc gccagaaaga ggatcgagcg ccggggcttc tcgcgcaggc tcgagaacgc
     4021 ccgcgcgatc tccagcatgc cggccgtccc gctcgcgttg tccagggcgc cgttgtagat
     4081 ctggtcgccg gcaatggtgg tgtcgcgccc cagatgatcc cagtgggcgc tgtagatgac
     4141 gtactcgtct cgaaccgccg ggtcggcccc ttccagccgc gcgaccacgt tctgggacga
     4201 gaagctccgg agcgcgacct tggcccggat actggctttg gcgtcgagcg gcacggggcg
     4261 gaactcgcgg gtgagcgcgg cgcgtttgag ggcgtcgaaa tcctggcccg ccgcggtgaa
     4321 gagcgccctg gcccggtcga gatgaatcca gccttcgatg gggacccggc cccggttgct
     4381 gtcggcccgg gcgatgtcga tgttctcgcg gccccggctg cccaccacca cggcgtaggg
     4441 atacccggcc ggaccctcct cgtggacgat gatggccgcg gccgcgccgc gggcgctggc
     4501 cgtttcgtac ttgtaggtcc agcggccgta ataggtcatg gccttgccgc ggaacacggc
     4561 gtcgtccagc cgagtggaat cggacgacga cacgatgggc ggatcattca ccagcatgat
     4621 tacgaccttg ccccggacat ccaccccttt ccagtcatcc cactggtact cgggcgcctc
     4681 gatgccgtag cccacaaaga ccacgtcgga ggccgggatc tgcacctggt tgacgtgccg
     4741 cagggtggcg accacgatgt cgtccgggac ccgcatcggg accggccgcc cccgggcggt
     4801 gaacgacacc tccggggtcg tggtgatgcc caccatgccc acctgctggg tccaggagcc
     4861 gtcgggattc cccggcgtca gccccagctg ctggaactgc cgggtcaggt actgcaccgt
     4921 cttctcttca cccggtgtcc ccggcccccg gccttcgaat tcgtcggagg cgagcacccg
     4981 gatcttcgcg agcaatgagt ccgggtggat ggtctcggcc gcaccggccc cgcccgcttc
     5041 cgggcggcag cctaccagca acagggccac gaggccggcc caaccgatcc gcctgggatt
     5101 cacgccggct ccttatccct gggcctgctt ggtcgatacc gtcttcttct tgttcttgtg
     5161 gggacgtcgc ttgccatagg tcccgcgcag cagcttgccg cggaaggact tccgatcgtg
     5221 cttgcccata gtgcccggct cgtggttgag agaggctgaa taatacccta tcggcccaac
     5281 cggaatgcgt ctcccgaaga gtggtactgg agcatgaacc gagctgccgc ggcgctccac
     5341 cctcttgcgt cccttctcgc ttggacgaag ctttgagcac cgtttcggtc acatgatcct
     5401 tctggaggcc tcatgtcgcg gatcccgcgc tggaccccca ctgccgccat cctcgcgctg
     5461 ctggcggtat caagctcgag tgcccaatcg accaacgagc ggaaagggtt ctggatcggc
     5521 ttcggcctcg gcttcggcaa cctcagctgc ggagattgcc ccaacgagcc gggcggaggc
     5581 ttctccggcc atctcaagct ggggggcacg cccagccgga aggtgctggt gggattcgag
     5641 tcgatgtttt gggtcaagga ggacgatgac ctcgacgcca ctctctctta cggcaacgcc
     5701 agcgccatcg tgcagttcgc cgtcggcctg acctggcatt agaagcggcc tcgcctcctt
     5761 cgactccttc gacttccttc gaccgacttc gaccg
//
LOCUS       DASWKS010000094         7887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2265123, whole genome shotgun sequence.
ACCESSION   DASWKS010000094 DASWKS010000000
VERSION     DASWKS010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7887
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2265123"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VGA78_02995"
     CDS             complement(<1..218)
                     /locus_tag="VGA78_02995"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892858.1"
                     /translation="MTDGLRPALGPWQFFSFAFGSIVGVGWVVLLGDWLQRGGPVGAI
                     LGFAIGGGLMVLIGLCYGEAATMFPVSGG"
     gene            361..1341
                     /locus_tag="VGA78_03000"
     CDS             361..1341
                     /locus_tag="VGA78_03000"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX9892859.1"
                     /translation="MGAEPNGQPRAVAVVGTGEIGRSWIRVFARAGYETRAWDPEPEQ
                     LASAWEWMKAELKRARKEQGLRKRVVRSEREHVVRCATLQEAVDGVIWVQESGPEVLE
                     QRRPIFAQLDKLTPPKAVLASSTSMLDMTAIAKGLSGANRCVIAHPVNPPHIIPAVEV
                     VGGHRTDPLVLRRAVRFLERLGLTPVLLRGYVTGLLLHRMEAALVREALHLVKEGFAS
                     PEAVDAVMRDGLGLRWALMGPFAVGNTSTDGGIREFFRRYRPVFERVCADLCGDLTLT
                     PEVVDQLAKSVDGTWRRVSRAQQRAWRDDMVGRIRHLKEAHPVKPPDPDD"
     gene            1439..2317
                     /locus_tag="VGA78_03005"
     CDS             1439..2317
                     /locus_tag="VGA78_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892860.1"
                     /translation="MSAIRTLLSHAIDYAGLFPPAGLGMREVVTNYAEYRNSVAAWAL
                     GRLVVPAARLDEFLQVARPLLSQTGDRWRLSAIASEDVRNQLAAVSRFNEQDSGAAVD
                     CFEFRAGDLASFRELAGMGPFGFRRFAELPWGQLAAGYVTLMQSTLVGAKFRTGGVVP
                     EAFPDPDALMQQLGDVIQGGVAVKCTAGLHHVVRGRYRLTYQADSPQSMMYGYLNLML
                     AAAALRMGVDPGIAKAVLLEEDPAAFVIEPAAVRWRELHFAAPVLSMMRDEGSLAFGS
                     CSFTEPLDELGRIPVA"
     gene            2314..3612
                     /gene="fahA"
                     /locus_tag="VGA78_03010"
     CDS             2314..3612
                     /gene="fahA"
                     /locus_tag="VGA78_03010"
                     /EC_number="3.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004334 - fumarylacetoacetase activity
                     [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetase"
                     /protein_id="HEX9892861.1"
                     /translation="MISLNATHDPALRSFVESANRPDHDFPIQNLPFGVFRRGGAEPR
                     IGVAIGDEVLDLAAAAEREFLAGLGDAIHQACRADALNPLMALGAEAWSALRSRLSTM
                     LSAGSDHAAATTLIPLGEVALALPARVGDYTDFYASIHHATQIGAMLRPENPLLPNYK
                     WVPIGYHGRASSLVPSDTPVHRPAGQLKDDAAPAPVFGPSRALDYECEVALFIGPGNA
                     LGVPIPIDRAGSHLFGLCLLNDWSARDIQRWEYQPLGPFLSKSFATTLSPWVVTAEAL
                     APFRGPVLPRGQGDPAPLPYLLDPIDQTHGGFDVSLEVWLHTDAMRRSNRPPARLSAC
                     SFLQMYWTLAQIIAHHASNGCNLRPGDLLASGTVSGPTEDSRGCLLELTWRGTRPVTL
                     PGGEVRRFLEDGDEVILQGHCRRDGAVPIGFGECRGRILP"
     gene            3609..4244
                     /gene="pdxH"
                     /locus_tag="VGA78_03015"
     CDS             3609..4244
                     /gene="pdxH"
                     /locus_tag="VGA78_03015"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEX9892862.1"
                     /translation="MNLEQLRREYARETLDESTVDPDPLTQFGLWFAEAQQADLLDPN
                     AMTLATATPAGRPSARVVLLKGVDHGGFVFYTDYRSRKSQELDTNPWAALLFYWGELE
                     RQVRITGRVSRVAQEMSEAYFMSRPLGSQLGAWASHQSAVLPARAELEARLRQLAARF
                     AEVPVPLPPHWGGWRLEPEEFEFWQGRESRLHDRVRYRRNETTWTIDRLSP"
     gene            4241..6601
                     /locus_tag="VGA78_03020"
     CDS             4241..6601
                     /locus_tag="VGA78_03020"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9892863.1"
                     /translation="MKILRFARKASAAGLAVSGALAGFPSPLVSQQPPRELSVDWIMR
                     GFEISGREPTEVRWTPDGQWIHFRWLEPGASWREPLRPFRVRARPGFRPEPQTRAQED
                     SVAPAIANGPVSPDRTRKLVGVAGDLWLVQLPSGTQRRLTQTPTITEVPLGFDLSGTV
                     AFFRRDHNALAMDLVHGSIRQLTDIRSGPAPDSAPKAEGQRAAVEAENRRLIGAVRDR
                     RWQDSLTRAEREEREKRQARPVYLERDERVAQLSPSPAGSHVLVITTVEAKDRDTRIP
                     SFVTLSGYTEELEARPKVGDAQPQGRAGLLDVHSGTVSWLKPDPNDSAARVFGSLNSM
                     GWNDAGTAALLWVVTRDWTTRYLHRIDAGSSSLFTLDILRDSAWVSGPCFGCGGWLPG
                     DQGVWLVSEADGWAHLYTLRADGTNRRQLTTGQWEVMQATLSPDRTRFELHTSEPSVF
                     ERHFYRMPVSGGPRVKVTGPVGGHAAVPSPDGSQLAIVYSEANRPPELFLQAGRPGAA
                     MDRLTTSPAPEWLAFPWIKPQIVRIPGSDGAPVPARIYRPADLGATPNGAAVIFVHGA
                     GYLHNVHQYWSSYFREYMFHHLLAQRGYLVLDLDFRASAGYGRDWRTAIYRHFGGRDL
                     EDQVDASRWLQSQHGIAAERIGIYGGSYGGFITLMALFTRGEYFGAGAALRSVTDWAH
                     YNHPYTSRIINEPQEDSVAYRRSSPLYFAEGLNDPLLIAHGMADVNVHFQDVVRLAQR
                     LIELGKTRWEMAVYPVEDHGFVRPDSWTDEYRRILELFERNLRPEP"
     gene            6598..7467
                     /locus_tag="VGA78_03025"
     CDS             6598..7467
                     /locus_tag="VGA78_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX9892864.1"
                     /translation="MRASRAVRLAQLGLAVNGLLALVKLVAGIVGHSQALIADATESF
                     ADLFSSVVVWGGVRIADRAPDDDHPFGHGKAEALAAGVVGVMLLGAALTIAIGSIREI
                     VRPHHVPAPFTLAVLVGVVVVKEGMFRVVRRGAAAIRSPAVAADAWHHRSDAITSSAA
                     FLGISVALIGGPGWEAADDVAALLASAIIVFNGLKVLRPAVDELMDHAPDSRLLSGVA
                     RAATAVPGVLAIEKLRGRKQGRWYFLELHVQADPGLSLHEAHILSGMVKSAIRSAEPE
                     VANVLVHMEPYRP"
     gene            7464..>7887
                     /gene="tilS"
                     /locus_tag="VGA78_03030"
     CDS             7464..>7887
                     /gene="tilS"
                     /locus_tag="VGA78_03030"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX9892865.1"
                     /translation="MTGLPGRFARHLASLDLPDGPVAVAVSGGPDSVALLHLMAAVTK
                     QTGLERLGPVIVAHVDHGIHPDSGSLADRVHQIATRLGFPCLITRLGLGPATSETVAR
                     EARYRALHAIAREQGALLFTAHHRDDQVETVLLRVLGGS"
BASE COUNT         1180 a         2700 c         2691 g         1316 t
ORIGIN      
        1 cccccggaga ccggaaacat ggtggcggcc tcgccgtagc agagcccgat caacaccatg
       61 agcccgccgc cgatcgcgaa gcccaggatc gctcccaccg ggccgccccg ctgtagccag
      121 tcgcccagca gcaccaccca gccgaccccc acgatgctgc cgaaggcaaa gctgaagaac
      181 tgccacggac ccagcgccgg acggaggccg tcggtcatga aatttccagg gttggggtcg
      241 aaagcggaaa ggcggctaca ataataccgg ccagatgccc ctgacccggc cggctggcta
      301 tccggcggca ccgggagcaa gcttcagctc tgacgtaggc cacgacttac cgagggaatg
      361 atgggcgctg aaccgaacgg ccagcccaga gcagtcgcgg tagtgggaac cggggaaatc
      421 ggccggtcgt ggatccgggt atttgcccgc gccggctacg agacccgggc ctgggaccct
      481 gagccggagc agctggccag cgcgtgggag tggatgaagg ccgaactcaa gcgggcccgg
      541 aaggagcagg ggctccgcaa gcgggtggtt cgcagcgagc gggagcatgt ggttcgctgt
      601 gccacgctac aagaggcggt cgatggggtc atctgggtcc aggaaagcgg ccccgaggtg
      661 ctggagcagc ggcgtccgat cttcgcccag ctggacaagc tgacgcctcc caaggcggtc
      721 ctggccagca gcacctccat gttggacatg accgccatcg ccaaggggct gtcgggcgcc
      781 aaccgttgcg tgatcgccca cccggtcaat ccaccgcaca tcattccggc ggtcgaggtg
      841 gtgggggggc atcggaccga cccgctcgtg ctgcgccgcg cggtgcgctt cctggagcgg
      901 ctggggctga ccccggtact gttgcgcggg tacgtcacgg ggctgctgct gcatcgcatg
      961 gaggcggcgc tggtgaggga agcgctgcac ctggtcaagg aagggttcgc ctcccccgaa
     1021 gccgtcgacg cggtgatgcg ggatgggctg ggcctgcgct gggccctgat gggccccttc
     1081 gcggtgggga acaccagcac cgatgggggc atccgcgagt tcttccggcg ctaccgcccg
     1141 gtcttcgagc gggtctgcgc cgatctgtgc ggcgacctca cgctcacgcc ggaagtggtg
     1201 gatcagctcg cgaagtcggt ggacggaacc tggcgccggg tctcgcgtgc ccagcagcgg
     1261 gcctggcggg acgacatggt cggccggatc cggcacctga aggaggccca tccggttaag
     1321 ccacccgatc ccgacgattg atcccgctgg cacctcgcgc caacggtttg cgccccagcc
     1381 ggccccggaa ctcgcggact cacccagcgg gtgggtcggc tacaatatta cccgtcccat
     1441 gagcgcaatc cgcaccctcc tgtcccatgc gatcgactat gccggtctct tcccacccgc
     1501 cggtctgggc atgcgcgagg tcgtcacgaa ctatgccgag taccgtaatt ccgttgcggc
     1561 ctgggccctg gggcggttgg tagtgcccgc ggcccggctg gatgaattcc ttcaggtcgc
     1621 ccgtccgctg ctgagccaga ccggcgaccg atggcggctc agcgccatcg cctccgagga
     1681 cgtgcgcaac cagctcgctg cggtgtcccg attcaacgag caggattccg gcgccgccgt
     1741 cgactgcttc gagttcagag ccggcgatct cgcgtcgttc cgggagctcg ccggcatggg
     1801 tccgttcggt ttccggcggt tcgctgagct gccgtggggc cagctcgcgg ccggctacgt
     1861 gacgctgatg cagagcacgc tggtgggcgc caaattccgc accggtgggg tggtgccgga
     1921 agcctttccc gaccccgatg cgctgatgca gcaactgggc gacgtgattc agggcggggt
     1981 ggcggtcaaa tgcaccgccg gactgcacca cgtcgtgcgc gggcggtacc gactcaccta
     2041 tcaagcggat tcgccgcaga gcatgatgta cgggtatctc aacctgatgc tggccgcggc
     2101 ggcattgcgt atgggcgtcg atcccgggat cgccaaagcc gttctcctcg aggaggaccc
     2161 ggcggccttt gtcatcgagc cagctgccgt gcgctggcgc gagctgcatt tcgcggcccc
     2221 ggtgctctcc atgatgcgtg acgagggctc gctggcgttc ggctcctgct ctttcacgga
     2281 accgctcgac gagctgggcc ggattcccgt cgcatgatct cgctcaatgc cactcacgac
     2341 ccggccctgc ggtcgttcgt cgagtcggcc aataggccgg accacgattt tccgatccag
     2401 aatctcccct tcggggtctt ccgccgtggc ggcgccgagc cgcggatcgg ggtggccatc
     2461 ggcgacgaag tgctggatct ggcggcggcg gcggagcgcg agttcctggc cgggctgggc
     2521 gacgctatcc atcaggcctg ccgcgccgac gccctcaacc cgttgatggc cctgggtgcc
     2581 gaggcctggt cggcgctgcg atcccggctg tccacgatgc tcagcgccgg ttccgaccac
     2641 gccgcggcaa ccaccctgat cccgctgggt gaggtcgcac tggcgctgcc ggcccgggtc
     2701 ggggactaca ccgacttcta cgcctccatc caccacgcga cccagatcgg cgccatgctc
     2761 cggcccgaga atccccttct tcccaactac aagtgggtgc cgatcggcta ccatgggcgg
     2821 gcgtcctcgc tggtcccgag cgacacgccg gtgcatcgcc cagccggcca gctcaaggat
     2881 gacgccgcgc ccgcccctgt cttcgggcct tcccgcgccc tggattacga atgcgaagtc
     2941 gccctgttca tcgggccggg caacgccctg ggtgtcccga ttcccatcga ccgcgccggg
     3001 tcccatctct tcgggctgtg cctgctcaac gactggtccg ctcgcgacat ccagcggtgg
     3061 gagtaccagc ccctcgggcc gtttctgtcg aagagcttcg cgaccacgct gtcgccctgg
     3121 gtcgtcacgg cggaggcgct ggccccgttt cgcggtccgg tcctgccgcg cggccaaggc
     3181 gacccggctc cgctgcccta tctgctcgat ccgatcgatc agacccacgg cgggttcgac
     3241 gtcagcctcg aagtctggct ccacaccgat gccatgcgac ggtccaaccg cccgcccgcc
     3301 cgcttgtcgg cctgtagttt tctgcagatg tactggactc tggcccagat catcgcccac
     3361 cacgccagca acggctgcaa cctgcggccg ggcgacctcc tggccagcgg caccgtctcc
     3421 ggccccaccg aggactcgcg cggctgcctc ttggagctca cctggcgggg cacgcggccg
     3481 gtgacactcc ccgggggcga ggtccgtcga ttcctggaag acggagacga ggtcatcctg
     3541 cagggacatt gtcggcgcga cggcgctgtc ccgatcggtt tcggcgaatg ccgggggcga
     3601 atcctgccat gaacctggaa cagcttcgcc gggaatacgc ccgcgaaacc ctggacgaat
     3661 ccaccgtaga cccggatccc ctgacccaat tcgggttgtg gttcgccgaa gcccagcagg
     3721 ccgatctgct ggatcccaac gccatgaccc tcgcgactgc cacgccggcg ggccgcccct
     3781 cggcccgggt ggtgttgctc aagggagtgg atcatggtgg attcgtgttc tacaccgact
     3841 atcgcagccg caagagtcag gagctcgaca ccaacccctg ggccgcgctg ctcttctact
     3901 ggggcgagct ggagcggcag gtacggatca ccggccgggt gtcgcgggta gcgcaggaga
     3961 tgtccgaggc gtacttcatg agccggccgc tgggcagcca gctgggggcc tgggcctcgc
     4021 atcagagcgc ggtgcttccc gcgcgagcgg agctggaggc gcgcctgcgc caactggcgg
     4081 cccgtttcgc cgaagtcccg gtcccgctgc cgccgcactg gggcggttgg cggctcgagc
     4141 cggaggaatt cgagttctgg cagggacggg aaagccgctt gcatgaccgg gtccgctatc
     4201 gccgcaacga aaccacatgg accatcgacc ggttgtcgcc atgaagattc ttcgcttcgc
     4261 tcggaaagcc agtgcggcgg ggctcgccgt ttcaggcgcg ctggccgggt ttccatctcc
     4321 cctcgtgtcg cagcaaccac cgcgcgagtt gtcggtcgac tggatcatgc ggggcttcga
     4381 gatcagcgga cgggagccca ctgaggtacg ctggactcca gatgggcaat ggatccattt
     4441 ccgctggctt gagcctggcg cgtcctggcg ggagccgctg cggccgttcc gggttcgcgc
     4501 ccggcccggc ttccgtcccg agccacagac ccgggcgcag gaagattcgg tggcgcccgc
     4561 catcgcgaac ggtccggtca gcccggaccg gactcggaag ctggtcggag tagccggcga
     4621 tctctggtta gtccagctcc cctccgggac gcagcgccgg ctcacccaga cgcctaccat
     4681 caccgaggtt ccgctgggtt tcgacctgag cggtacggtc gccttctttc gccgcgacca
     4741 caacgcgctg gcgatggatc tggttcacgg gagtatccgg caactcaccg atatccggtc
     4801 ggggcccgcg cccgatagcg cacccaaggc cgaagggcaa cgcgcggcgg tcgaagcgga
     4861 gaaccgccgc ctgatcggtg cggtgcggga tcgtcgctgg caggacagtc tcacccgggc
     4921 cgagcgcgaa gaacgggaga agcgtcaggc ccggccggtg tacctggagc gggatgagcg
     4981 ggtggcgcag ttgtctccct cgccggccgg aagtcacgtg ctggtgatca ccacggtcga
     5041 ggcgaaggac cgcgacaccc ggattccttc gttcgtcacg ctctcgggat ataccgagga
     5101 gctggaggcc cgacccaaag tgggtgacgc ccagccacag ggccgggccg gtctgctcga
     5161 tgttcacagc ggtaccgtga gctggctcaa gcccgatccc aatgactcgg ccgcccgcgt
     5221 gttcggctcg ctcaactcca tggggtggaa cgatgccggg accgccgcac tgctctgggt
     5281 ggtcacccgc gactggacga cccggtatct ccaccggatc gatgccggat catcttcgct
     5341 cttcacgctc gacatcttgc gcgattccgc ctgggtcagc ggcccctgct ttggttgtgg
     5401 aggctggctg ccgggagacc agggtgtctg gctggtttcc gaagccgacg gctgggccca
     5461 tctatatacg ttgcgggccg acgggaccaa ccggcgccag ctgacgaccg ggcagtggga
     5521 ggtgatgcag gcgacgctct cgccggaccg cacccggttc gaactccata ccagcgagcc
     5581 gtcggtcttc gaacgtcact tttaccggat gccggtatcg ggcggccccc gggtcaaggt
     5641 caccggaccg gtaggtggac atgcggcggt cccctcgccc gacggctcgc agctcgccat
     5701 cgtctactcc gaagccaacc ggccgcccga actcttcctg caagccgggc ggcccggtgc
     5761 cgcgatggac cggctcacca cctcgcccgc gccggaatgg ctggcgttcc cgtggatcaa
     5821 gccgcagatc gtccggatcc cgggctccga cggagctccg gtaccggccc ggatctatcg
     5881 gccggcggac ctcggcgcca cgccgaacgg cgccgccgtg atcttcgtgc acggggccgg
     5941 ctatctccac aacgtgcatc agtattggtc cagctatttc cgggagtaca tgttccacca
     6001 cctgctggcg cagcgggggt acctggtgct ggatctcgat ttccgcgcct cggccggcta
     6061 tggacgcgac tggcgcacgg ccatctaccg gcatttcggc ggccgggatc tcgaggacca
     6121 ggtcgatgcc tcccgctggc tccagtcgca gcacgggatt gcggccgagc ggatcgggat
     6181 ctacggtggg agttacggcg ggttcatcac cctgatggcc ctcttcaccc ggggcgagta
     6241 tttcggcgcg ggcgcggcac tccggtcggt caccgactgg gctcactaca accatccata
     6301 cacctcgcgc atcatcaacg agccgcagga ggactcggtc gcctaccggc gctcgtctcc
     6361 gctctacttc gccgagggcc tgaacgaccc cctgctgatc gctcacggca tggcggacgt
     6421 gaacgtgcac ttccaggatg tcgtgcgtct ggcccagcgg ttgatcgagc tggggaagac
     6481 ccgctgggaa atggcggtct acccggtgga ggaccacggt ttcgtgcggc ccgactcgtg
     6541 gactgacgaa tatcgacgga tcctggagct gttcgagcgg aacctccgcc cggagccatg
     6601 agggcttcgc gcgccgtccg gctggcgcag ctcgggctgg cggtcaacgg cctcctcgcg
     6661 ttggtaaaac tggtcgccgg catcgtcggg cattcgcaag ccctgatcgc ggatgccacc
     6721 gaatccttcg ctgatctctt ctcgagcgtg gtcgtttggg gcggtgtccg catcgccgac
     6781 cgggcccccg acgacgacca ccctttcggc cacggcaaag ccgaggccct cgccgctggt
     6841 gtggtcgggg taatgctgct cggagccgcg ctgaccatcg ccattggctc gatccgcgaa
     6901 atcgtccgac cccaccacgt gccggcgccg ttcacgctgg cggtgctggt gggcgtcgtg
     6961 gtcgtgaagg agggaatgtt ccgggtggtg cggcgtggcg cggcggcgat tcgaagtccg
     7021 gccgtcgcgg ccgacgcctg gcatcatcgc agcgatgcga tcacctcatc cgcggccttc
     7081 ctcggcatct cggtggccct gatcggcggg ccgggctggg aagcggccga cgatgtggcg
     7141 gcgctgctgg cctcggcgat catcgtgttc aacggtctca aggtgctgcg ccccgccgtg
     7201 gatgagctga tggatcacgc gcccgattcc cggctgctct cgggagtggc ccgcgcggcc
     7261 acggcggtgc ctggggtcct ggccatcgag aagctgcggg gccgcaagca ggggcgctgg
     7321 tatttcctgg agctgcacgt gcaggccgac ccgggtctct cgctgcatga ggcgcatatc
     7381 ctgagcggca tggtcaagtc cgccatccgc agcgccgagc ccgaggtggc gaacgtgctg
     7441 gtccacatgg agccgtaccg gccgtgaccg ggctgccggg ccggttcgcc agacacctgg
     7501 cgtcgctcga cctacccgat gggccggtgg cggtcgcggt ctcgggcggc cccgactcgg
     7561 tggcgctgct ccaccttatg gcagcggtga cgaagcaaac cgggttggaa cggctgggac
     7621 ccgtgatcgt ggcccacgtg gaccatggga tccatcctga cagcggatcg ctggccgacc
     7681 gggtgcacca gatcgctacc cggctcggtt tcccctgtct catcacccgg ttagggctcg
     7741 gtccagccac cagcgaaacg gtcgcacggg aggcccgcta ccgcgccctg cacgcgatcg
     7801 cccgagagca gggcgcgctg cttttcacgg cccaccatcg ggatgaccag gtggagactg
     7861 tgctgctgcg ggttctgggc gggagcg
//
LOCUS       DASWKS010000095         2315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1520126, whole genome shotgun sequence.
ACCESSION   DASWKS010000095 DASWKS010000000
VERSION     DASWKS010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520126"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VGA78_03035"
     CDS             <1..296
                     /locus_tag="VGA78_03035"
                     /inference="COORDINATES: protein motif:HMM:NF014047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HEX9892866.1"
                     /translation="HDYVADEVAADRLERLIARVREQARRKHLSRVGQIHEILVERPA
                     RRGGFMLGRTRQNQLVLVDLPPTAVGEYHQTRLTGTTGSTFTGALERASLAVL"
     gene            293..577
                     /locus_tag="VGA78_03040"
     CDS             293..577
                     /locus_tag="VGA78_03040"
                     /inference="COORDINATES: protein motif:HMM:NF022179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="late competence development ComFB family
                     protein"
                     /protein_id="HEX9892867.1"
                     /translation="MIHNLVEEHVRDSFDGVVKSFPDFCGCYICREDVYVYALNRVTP
                     CYVRSHQGLAVTEVRLDKHQERAVIDVAVIDGIRRVHATPRCEKRRPVTK"
     gene            588..>2315
                     /locus_tag="VGA78_03045"
     CDS             588..>2315
                     /locus_tag="VGA78_03045"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX9892868.1"
                     /translation="MRRPPPVVWFVIAFGAGLATGLAHFRTGLAAFGCAGAVALLYRS
                     DGLLIPIAALLGLGHGLVAHDLAGRTCAARLRSGPQTLVVLLRDAGRVGLVSARPVGV
                     SCRGTIAVRWPERPPTSAGKTVTLEGRWLTRPAWAERPDGVFIVRRVLEVRGRPNPAA
                     RLRGWVTETAETRFGARAGLIDALVLGRRGAMDAELKDAFARSGLVHLLSISGFHVGL
                     ITAWLVLLLRSARVPRVRAIVIGAATSAAYVGFLGWPAPATRAAALGLLLALGIARQR
                     AVQPTALLLVTCLIVLLVDPWAISDLGAWLSAAALWGATTFTRWSDRAVGTHPGIRTL
                     FASIGATLAAAPITAYALGTVALAGIVLNFVGIPMAALAVPGILLTLLFSPVAPAVAD
                     AMAGGTGLVLAGLEQVALLGSRIPGGSLTVEPSPWALGFWLALLGVGCFVVTSGTRIE
                     LAIRRSALAFAASSWLWVTLFQFRIQHEGRGELTLFFLRVGQGDAAALRTPGGRWLLL
                     DAGPVSDRSDAGARTVAPFLLRHGARNLQGLVVSHAHADHLGGVPSVLRRLPAAGVLE
                     PAVPVPDSLY"
BASE COUNT          279 a          786 c          836 g          414 t
ORIGIN      
        1 cgcacgacta cgtggccgac gaggtggcgg cggaccggct ggagcggctc atcgcgcgag
       61 tccgggagca ggcccgccgc aagcacctct cacgggtggg acaaatccac gagattctgg
      121 tggaacgtcc agcccgccgc ggcggcttca tgctgggacg cacccgacag aatcaactgg
      181 tgctggtgga tctgccgccc accgcggtgg gcgagtatca tcagacccga ctcaccggca
      241 cgaccggatc caccttcacc ggggcgctcg agcgagcctc gctggcggtt ctatgatcca
      301 caatctggta gaagagcacg tgcgggactc cttcgacgga gtggtcaaga gctttcccga
      361 tttctgcggc tgctatatct gccgggaaga cgtctacgtc tatgccctga accgggtcac
      421 gccctgctac gtacggagcc accagggatt ggcggtgacg gaagtgcggc tcgacaaaca
      481 ccaggaacgg gccgtgatcg acgtcgcggt catcgacggg atccgccggg tgcacgcgac
      541 gccccggtgc gagaagcggc ggcccgtcac gaaatgatgg cgggggcgtg aggcgcccgc
      601 cccccgtggt ctggtttgtg attgccttcg gggccggtct cgcgaccggc ctcgcgcatt
      661 ttcgtaccgg tctggcggcg tttggctgtg ccggggcggt cgccctgctg taccgaagcg
      721 acgggctcct catcccgatc gcggctctgc tcgggctggg acacgggctg gtggcccacg
      781 acctagctgg ccggacctgc gcggcccggc tccggtccgg cccccagacc ctggtagtct
      841 tgctgcgcga tgccggccgg gtcggattgg tcagcgccag gccggtcgga gtgagctgcc
      901 ggggaaccat cgcggtgcga tggccggagc ggccgccgac ttcggccgga aagaccgtca
      961 cgctggaggg gcgctggctc acccggccgg cgtgggccga acgtcccgat ggcgtgttca
     1021 tcgtgcgacg ggtgctggag gttcggggac ggcccaatcc ggcggcgcgg ctccgcggct
     1081 gggtcaccga aaccgcggag acccggttcg gggcccgggc cggactgatc gacgccttgg
     1141 tgctcggccg gcgcggcgcc atggatgccg agctcaaaga cgcatttgcc cgaagcggtc
     1201 tggtgcacct gttgtccatc agcggctttc acgtgggcct gatcaccgcc tggctggtgc
     1261 tgctgctccg ctcggctcgg gtgccgcggg tccgggccat cgtcattggc gcggccacct
     1321 ccgccgccta cgtcggcttt ctaggctggc cggcgccggc gacccgggcc gccgcgctgg
     1381 gtctgctgct cgcgctgggc atagcgcgcc agcgagcggt tcagcccact gcgctgttgc
     1441 tggtcacctg tctgatcgtg ctgctggtcg atccctgggc catctccgat ctgggtgcct
     1501 ggttgtccgc ggccgctctc tggggcgcca ccaccttcac ccgctggagc gaccgcgcgg
     1561 tcgggaccca tcccggcatt cgcaccctgt tcgcctccat cggcgccacg ctggccgcag
     1621 ccccgatcac cgcctatgcg ctcggcacgg tggcgctggc cgggatcgtc ctcaacttcg
     1681 tcgggattcc catggcggcg ctcgcggtgc ccgggatcct gctgaccctg ctcttctcgc
     1741 cggttgcgcc tgcggtggcc gacgcgatgg ccggcggcac tggcctggtg ctcgcggggc
     1801 tggaacaggt ggccctgctg ggctcccgga ttccgggcgg ctccctgacg gtggagccca
     1861 gcccgtgggc tctggggttc tggctcgcac tcctgggggt cgggtgtttt gtcgtgacca
     1921 gcggaacccg gatcgaactg gcgattcgcc ggtccgccct ggcgttcgcc gcgtccagct
     1981 ggctctgggt gactctgttt cagtttcgga ttcaacatga gggccggggg gaattgacgt
     2041 tattcttcct ccgcgtgggc cagggtgacg cggccgcgct tcgcacgccg ggtggtcgct
     2101 ggctgctgct ggatgcggga ccggtcagcg accggagcga tgccggtgcc cgcactgtgg
     2161 ccccgtttct cttgcgacat ggcgcccgca atctgcaggg actggtcgtg tcgcacgctc
     2221 atgccgacca tctgggcggg gtgccgagcg tcctgcgccg gttgccggcg gccggagtgc
     2281 tggagccggc ggtaccggtg cccgactcgc tctac
//
LOCUS       DASWKS010000096         1614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3367308, whole genome shotgun sequence.
ACCESSION   DASWKS010000096 DASWKS010000000
VERSION     DASWKS010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3367308"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /locus_tag="VGA78_03050"
     CDS             complement(<1..1161)
                     /locus_tag="VGA78_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892869.1"
                     /translation="MKLRAQLLRAWSGPLPAAAILPAHYPLEVASERTVCEACGAPLR
                     RQRTSTRYPRGVVLGRPRVRYVEKQCVRCGRLYRCEEYHRLVPPQGNYAFDLIVVVGL
                     ARFREHRQDAEIQQELIARCGWPLPQTTIGELAQTFLDCLAATHFARASQLRKRLEED
                     GGYALHLDGTCEPGTETVFNLVAGPRGWTLAGAKMAAEEAASITQLLRRCVERFGRPL
                     ASVRDLSSQIENAVKEVLGDLPDLICHYHFLENVGTKLCEKPHGQLTAALRRLKIQSA
                     LRSLRKDLVRYSKQRARLSAEQIARCLEASESPADLDPLQVRRALTYFVLRWLEDYVA
                     DLAGEYFPFDLPSLAFYRRGCRIYDWLAQTTAAADFPHQDLSTLKTIARHLAP"
     gene            complement(1158..>1614)
                     /locus_tag="VGA78_03055"
     CDS             complement(1158..>1614)
                     /locus_tag="VGA78_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892870.1"
                     /translation="YQGIRFSKWGSLSKTVVGLVEQSPAGMTASELEKALQVPNLKPL
                     LTRLAGQAQVQRVGVGGSLVYLAVESARGQQQFQGREREVAAKRAAESLPALAEINAL
                     LVAMIRHPQDTPRQWARRLSRQGIRLKTGQIQAVIDHYRLDVKKGLSSS"
BASE COUNT          268 a          519 c          541 g          286 t
ORIGIN      
        1 cggcgccagg tggcgggcga tcgtcttcag ggtcgagaga tcctggtggg ggaaatcggc
       61 ggccgccgtc gtttgggcca gccaatcgta gatccgacag ccgcggcgat agaaggccaa
      121 gctcggcagg tcaaaaggga agtattcgcc tgcgaggtcg gcgacgtagt cctccaacca
      181 ccgcaacacg aaatacgtca gcgcccgccg cacctggagc gggtccaggt cggccgggga
      241 ttccgacgct tccaggcacc gtgcgatctg ttcggccgag aggcgggctc gctgcttgct
      301 gtagcgcacc agatccttgc gcagggaacg cagggcggat tggatcttca aacgccgcag
      361 ggcggcggtg agttgtccat gcggcttctc gcagagcttc gtgcccacgt tctccaggaa
      421 gtgatagtgg cagatcaggt cggggaggtc ccccaggact tccttgacgg cgttctcgat
      481 ttgagaactc aggtctcgca ccgaggccaa cggcctgccg aacctttcca cgcaacggcg
      541 cagcagttgc gtgatggagg cggcctcttc ggctgccatc ttcgcgcccg cgagggtcca
      601 gccgcgcggg cccgccacga ggttgaacac ggtttccgtg cctggctcac aggtgccgtc
      661 gaggtgcagc gcataacctc cgtcctcttc cagtcgcttc cgcaattgag aagcccgagc
      721 gaaatgagtg gccgccagac agtcgaggaa ggtctgagcc aactcgccga tcgtggtctg
      781 cggcagcggc catccgcagc gagcgattag ttcctgctgg atttctgcgt cttggcgatg
      841 ctcgcggaaa cgggccagtc ccaccacgac gatcaggtcg aaggcgtagt ttccctgcgg
      901 cggaaccagg cggtggtatt cctcgcagcg atagagcctg ccgcagcgga cgcactgctt
      961 ttcaacatag cgtacccgcg gccgaccgag caccacgccc cgcgggtaac gggtcgaagt
     1021 gcgctgacgg cgcagggggg cgccgcaggc ttcgcacacc gtccgctcgc tggccacttc
     1081 cagagggtag tgcgcaggca ggatcgcggc ggcgggcagc ggccccgacc aggcccgcag
     1141 cagttgggcg cggagtttca agaactcgag agcccttttt ttacgtccag ccggtagtgg
     1201 tcgatcaccg cctggatctg tccggttttc aggcggattc cttggcggct cagccgccgc
     1261 gcccactggc ggggagtgtc ttgcggatgg cggatcattg cgaccaagag ggcgttgatc
     1321 tccgccagcg ccggcaagga ctccgccgca cgcttcgccg ccacctcccg ttctcgcccc
     1381 tggaactgct gctggccccg cgcggactcg accgcgagat agaccagact tccgccgacc
     1441 cctacccgtt gcacctgggc ttggccggcc agacgggtga gcaggggttt gaggttggga
     1501 acctgcaggg ccttctcgag ttcgctggcg gtcatcccgg ctgggctttg ctcgacgagc
     1561 cccacgacgg tcttggagag gcttccccac ttgctgaagc gaatgccttg atag
//
LOCUS       DASWKS010000097         2460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2628873, whole genome shotgun sequence.
ACCESSION   DASWKS010000097 DASWKS010000000
VERSION     DASWKS010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2628873"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2460
                     /gene="uvrA"
                     /locus_tag="VGA78_03060"
     CDS             <1..>2460
                     /gene="uvrA"
                     /locus_tag="VGA78_03060"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX9892871.1"
                     /translation="LTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGLME
                     KPDVDSIEGLSPAISIEQKSTGHNPRSTVGTVTEIYDYMRLLWARVGIPLCPNDGTPV
                     SRQTPSQIADAILQWPEGTRLEILGPVVRGRKGEFKDLFEDLRKRGFVRVRVDGEIYE
                     LDKVPALHRRHNHDVAVVVDRLVVREGDRGRLVDSIETALKVADGIVEVVPQDKRPDG
                     PTARRTDAAGRPSVRPSARLFSERLACPTCGHSFPELEPRQFSFNSPFGVCPDCHGLG
                     TRREANLDLVLGDPSISLLEGVVLPWGEPSGYLRKVVLPTLARTYKFDLQAPWKSLPE
                     AARRVILQGAPGKTIKFAAEGSRAGQYESEWEGVLKNVERRYRETTSDSVRVQLDEFM
                     VEMPCAACGGRRLKPESLSVLVAGRNIGDVVDMSVDESLAFFDGIPLGRTRSNGVDPE
                     IAGPVVKEIAGRLRFLKDVGLEYLTLGRAAGSLSGGEAQRIRLATQIGSRLVGVLYIL
                     DEPSIGLHQRDNARLLATLRGLRDLGNTVLVVEHDEDTIRAADHVIDLGPRAGRHGGQ
                     VIAAGTIDRIVAHPESLTGRYLRNELRVAVPSGRRPPQPSRRLRIVGARANNLRNLTI
                     DIPLGLFVAVTGVSGSGKSTLVTEILYRALARHLYRAKLVPGAHSRIEGLDHIDKVID
                     IDQSPIGRTPRSNPATYTGLFTPIRDLFAQLPESKMRGYGPGRFSFNVKGGRCEACEG
                     DGLVKIEMHFLPDVYVPCEVCKGRRYNRETLEVRYKGRSIADVLDLTVADGLDFFDAQ
                     PRIVERLELLNDVGLGYLHLG"
BASE COUNT          396 a          823 c          827 g          414 t
ORIGIN      
        1 gctcacggtc atcaccgggt tgtccggttc gggtaagtcg tcgttggcct tcgacaccat
       61 ctacgccgaa ggacaacggc gctatgtgga gtcgctctcc gcctacgccc gccagttcct
      121 ggggttgatg gagaaacccg acgtcgattc catcgaaggc ctctcgcccg ccatctccat
      181 cgagcagaag tccaccggtc acaaccctcg ctccaccgtg ggtaccgtca ccgagatcta
      241 cgattacatg cggctgctct gggcccgggt cgggattccg ctctgtccca acgacggcac
      301 gcccgtcagc cggcagacgc cctcgcagat cgccgacgcc atcctgcagt ggcccgaggg
      361 gacccggctg gagatcctgg gaccggtggt gcggggccgc aaaggcgaat tcaaggacct
      421 gttcgaggac ctgcgcaagc gcggcttcgt ccgggtgcgg gtggatggtg agatctacga
      481 actggacaag gtgcctgccc tccaccggcg ccacaaccac gacgtggccg tcgtcgtcga
      541 ccggctggtg gttcgcgagg gcgatcgggg ccgcctggtc gattcgatcg aaaccgccct
      601 caaggtcgcg gacgggatcg ttgaagtggt accccaggac aagcggcccg acggtccgac
      661 ggcccgacgg accgacgctg cgggccgtcc gtccgtccgt ccgtccgccc gtctgttcag
      721 cgaacggctg gcgtgcccca cctgcggcca ctccttcccc gagttggagc cgcgccagtt
      781 ctccttcaac tcccccttcg gggtctgtcc cgactgtcac gggctgggca cccggcgcga
      841 agccaacctc gatctggtcc tgggtgatcc cagcatctct ctgctggagg gcgtcgtgct
      901 tccctgggga gagcccagcg ggtatctgcg gaaggtggtg cttcccaccc tggcccggac
      961 ctacaagttc gacctccaag cgccctggaa atcgctgccg gaagcggccc ggcgggtgat
     1021 cctgcagggc gcgccgggga agaccatcaa gttcgccgct gagggcagcc gggctgggca
     1081 gtacgagagc gaatgggaag gcgtgctcaa gaacgtcgag cggcgctacc gggaaaccac
     1141 cagtgactcg gtgcgggtcc agctggatga attcatggtc gagatgccct gtgccgcctg
     1201 cggcggccgg cggctcaagc ccgagagcct ctcagtgctg gtggccggcc ggaacatcgg
     1261 tgacgtggtc gacatgtccg tagacgaatc gctcgccttt ttcgatggca tcccgctggg
     1321 gcggaccaga tccaacggcg tggatccgga aatcgccggg ccggtggtga aggagatcgc
     1381 cggccggctt cggtttctga aggacgtggg cctcgagtat ctcaccctcg gacgcgcggc
     1441 cgggtcgctc tcgggcggag aggcccagcg gatccggctg gccacccaga tcggctcgcg
     1501 gctggtggga gtgctctaca tcctggacga gcccagtatc gggctccacc aacgggacaa
     1561 tgcccggttg ctcgcgaccc tgcgcgggct gcgcgatctg ggcaacaccg tgctggtggt
     1621 cgagcatgac gaagacacca tccgggcggc cgatcacgtg atcgatctgg gcccgcgagc
     1681 gggccggcat ggcggccagg tcatcgcggc ggggaccatc gatcgcatcg tggcccatcc
     1741 ggagtcgctc accggccgat acctccgcaa cgagctgcgg gtcgcggtgc cgtcgggccg
     1801 ccgcccgccc cagccgtccc gccggctccg gatcgtggga gccagggcca acaacctgcg
     1861 caaccttacc atcgatatcc cgctcggtct gttcgtagcc gtaacggggg tctccgggtc
     1921 ggggaaatcc actctggtga cggagatcct gtatcgggcg ctggcccggc atctctatcg
     1981 ggccaagctg gtgcccggag cgcacagccg catcgaaggc ctcgatcaca tcgacaaggt
     2041 gatcgacatc gaccagagcc ccatcgggcg gacgccccgg tccaatcccg cgacctacac
     2101 cgggttgttc actccgattc gcgatctctt cgcccagctc ccggagtcca agatgcgggg
     2161 ctacgggccg ggccgtttct ccttcaacgt gaagggcggc cgctgcgagg cctgcgaggg
     2221 cgacgggctg gtcaagatcg aaatgcactt cctgcccgat gtctacgtgc cctgcgaagt
     2281 gtgcaagggc cggcgctaca accgcgagac cctggaggtc cgctacaagg gacgcagcat
     2341 cgccgatgtg ctggatctca ccgtggcgga cgggctcgac ttcttcgatg cgcagcctcg
     2401 aatcgtggag cggctcgagc tgctgaatga cgtggggttg ggttacctgc atctgggcca
//
LOCUS       DASWKS010000098         2221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2629108, whole genome shotgun sequence.
ACCESSION   DASWKS010000098 DASWKS010000000
VERSION     DASWKS010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629108"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..460)
                     /locus_tag="VGA78_03065"
     CDS             complement(158..460)
                     /locus_tag="VGA78_03065"
                     /inference="COORDINATES: protein motif:HMM:NF025142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HEX9892872.1"
                     /translation="MSSAYQVVYWRDIPAQVKIRHDGGRAARPLSDRFQAAIDEAAMH
                     SGATDTDSYLEEWRSSDWQSRDGDPEALAVALVSELEAAYPPERLTALTANGGREG"
     gene            complement(457..1041)
                     /locus_tag="VGA78_03070"
     CDS             complement(457..1041)
                     /locus_tag="VGA78_03070"
                     /inference="COORDINATES: protein motif:HMM:NF019413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1638 domain-containing protein"
                     /protein_id="HEX9892873.1"
                     /translation="MTRTALIVCGALAREVLALRDKHGWEADVLGVPALLHNRPDRIP
                     DAVLARIREARAAYDRVLVVYGDCGTGGLLDRALEREGVERLAGPHCYEMYADREFDS
                     LMAAEPGTFFLTDYLVRSFDHLVIEGLGLDRHPELRDDYFHNYTRVLYLAQQADPALV
                     TRAQQAAARLGLPLTIGQVGYGALERRLQAWFER"
     gene            complement(1038..1973)
                     /locus_tag="VGA78_03075"
     CDS             complement(1038..1973)
                     /locus_tag="VGA78_03075"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX9892874.1"
                     /translation="MDRQTWLRMMDEAGGVLLADGAMGTMLFDSGLEFGEAPERWNLE
                     HPDRVGAVHAGYLAAGSQVLLTNTFGANRFRLALHGLEDRVAELNRAGAETLHAAVAA
                     AGRPALVAGDIGPSGSLLTPLGDLEFGDAVAGFAEQAGALVAAGVDLLWIETMSDLDE
                     IRAALEGVRQVAPEIAVVTTMSFDTHGRTMMGVKPGDAVQALHSWGATAVGGNCGNGP
                     EEVIQVVQKMRAVAPETVLVAKGNAGMPELVKGRACYHATPESMADYLRRAVEAGAAV
                     VGACCGSTPEHVRAMAGALNEIRRQRVLSPAEDPV"
     gene            complement(2032..>2221)
                     /locus_tag="VGA78_03080"
     CDS             complement(2032..>2221)
                     /locus_tag="VGA78_03080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892875.1"
                     /translation="GIVIKALKEAGIRDQLIVLVGGAPLNAAFAEEIEADAYCRDAAI
                     AVVTAKQLMAIKRGEVAV"
BASE COUNT          378 a          811 c          667 g          365 t
ORIGIN      
        1 atggtcaatc ggagaagctg gaggcggcca atcaaatcga atggcgggtc tggagtttgg
       61 ctaccgctgg cgggctacgc ctggcgggag ggccggctca ttgaccgaac tcggtcacgg
      121 ccggtattct tgcggagccg tacgccggcg gtcggattca gccttctcgc ccgccgttgg
      181 cggtgagagc ggtcaagcgc tcgggagggt aggcggcctc gagttcagag accagcgcga
      241 cggccagggc ctccggatcg ccgtcgcggg actgccaatc ggagctgcgc cactcctcca
      301 ggtagctgtc ggtgtcggtt gccccactgt gcatggccgc ttcgtcgata gctgcctgaa
      361 atcggtcgct cagcggccgg gccgcccggc cgccatcgtg gcgaatcttc acctgggctg
      421 gaatgtcccg ccagtacacg acctggtagg cagaactcat cgctcgaacc aggcctgcag
      481 ccggcgctcc agcgcgccgt aaccgacctg cccgatcgtg agcggaagcc ccaagcgggc
      541 cgcagcttgc tgcgcccggg tcacaagggc ggggtcagct tgctgggcca ggtaaagcac
      601 ccgggtgtag ttgtggaaat agtcgtcgcg cagttcggga tgacggtcga gccccaggcc
      661 ttcgatcacc agatggtcga aagaacgcac caggtagtcg gtcagaaaaa aggtgccagg
      721 ctctgcagcc atcagcgagt cgaactcccg gtcagcgtac atctcatagc agtgcggacc
      781 ggccaaccgc tccacgccct ctcgctccag agcacgatcg agcagaccgc ccgttccgca
      841 gtctccatac acgaccagca cccggtcgta cgcggcgcgg gcttcccgaa tccgcgccag
      901 caccgcgtcc ggaatccgat ccggccggtt gtgcagcaac gccggaaccc ccaggacgtc
      961 ggcctcccac ccgtgcttgt cccgcagggc caggacctct cgggcgagag caccgcacac
     1021 gatcaatgcg gttcgggtca aaccggatcc tccgccgggg agagtacccg ctggcggcgg
     1081 atttcgttca aggcaccggc catcgcccgc acatgctcgg gcgtactgcc gcagcaggcg
     1141 cccaccaccg ccgcgccggc ctccaccgct cgcctcagat agtccgccat gctttccggt
     1201 gtggcatggt agcaggcgcg tcccttgacc agctccggca ttcccgcatt gcccttagcg
     1261 accagcaccg tttcgggagc gacggcccgc attttttgga caacttggat cacctcttca
     1321 gggccattgc cgcaattccc gcccaccgcg gtggctcccc acgagtggag ggcctgcact
     1381 gcatctcccg gcttcacccc catcatcgtt cgcccgtggg tatcaaagct catcgtagtt
     1441 acgaccgcga tctcgggcgc cacctgccga acgccctcca gtgccgcccg gatctcatcg
     1501 agatccgaca tggtttcgat ccagagtaga tcgactcccg cagcaaccag cgctccagcc
     1561 tgttcggcga agccggccac tgcgtcaccg aactctaaat caccgagcgg tgtgagcaaa
     1621 gatccgctcg ggccgatatc tccggcaacc agcgcgggcc gcccggccgc tgcgaccgcg
     1681 gcatgcaggg tctccgcccc cgcccggttg agctcggcga cccgatcctc cagcccgtgc
     1741 agcgccaggc gaaaacggtt ggccccgaaa gtgttggtca gcagcacttg cgagccggcc
     1801 gccagatacc cggcgtgcac ggctcccacc cgatccgggt gctcgaggtt ccagcgctcg
     1861 ggagcctcgc cgaattccag gccggagtca aacagcatgg tacccatcgc cccgtcggcc
     1921 aacaggacgc ctcccgcttc gtccatcatt cgcagccagg tttgtcggtc cattacaagg
     1981 ccacctcgcc gccccggaac gccctccagt ccagccaccc ctctagcccc atcacaccgc
     2041 cacctcgccg cgcttgatcg ccatcagctg cttggcggtc accaccgcga tcgccgcgtc
     2101 gcggcaatag gcgtccgcct caatctcttc ggcaaacgcg gcgttgagtg gcgcgccgcc
     2161 gaccagcacg attagttggt cgcggatccc cgcctccttc agtgccttga tcacgatccc
     2221 c
//
LOCUS       DASWKS010000099         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_788979, whole genome shotgun sequence.
ACCESSION   DASWKS010000099 DASWKS010000000
VERSION     DASWKS010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_788979"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1824)
                     /locus_tag="VGA78_03085"
     CDS             complement(<1..1824)
                     /locus_tag="VGA78_03085"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9892876.1"
                     /translation="MSTGSGLVGQGIQRNEDPKLLTGRALFVDDVHLPGMLHAALVRS
                     DHAHARLRGIDTSAALKRSGVVAVYTAADLGEYWRPGPLLVGPVPIPGVVYHEATQVP
                     LVRDKVRHCGEPLALVVAESRYIAEDAAADVMVELEPLPAVTDLEAALAPGAALVHDQ
                     LGSNLAAHAVQRKGDWAAARAAAGRIISRRFRYDRGVSGAIENRGIVVSWDPRHEELT
                     VWDTTQAPIPIRNGLARMLGLRQSQVRVIAPFIGGGFGPKIMMFYPEEVLLPWAAMRL
                     GRPVKWIEDRQENFFATTQERLQIHDAELAISREGKILGVRDVFLHDTGAYNPYGLTV
                     PINSQCTLLGQYNVPNYESEFTVVFTNRPIVTPVRGAGRQHGVFVMERLLDLAARDLG
                     LDPVEIRRRNLLPPEAFPHNHGILFQDSAPLTYDSGDYLPALDQAAATIGWERFKADE
                     QPRARAEGRRLGIGLVTYIEGTGIGPYEGARVTVEPGGTIRLATGVGTQGQGHFTSFA
                     QIVGEVLGVDVGRVDVITGDTREFSWGTGTFASRGAVVAGTACHEAALRVRAKAAALA
                     AELLEVAPEDLEFREGRVAVKGVPHRGISLGDLAVRANPLRG"
     gene            complement(1821..2291)
                     /locus_tag="VGA78_03090"
     CDS             complement(1821..2291)
                     /locus_tag="VGA78_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9892877.1"
                     /translation="MVGVSVSVNGRTHDCQVEPRLLLSDFLRHDLELTGTHVGCEHGV
                     CGACTVLLDGEAVRSCLVFAVQTDGREVTTVEGLAEGGELHPLQAAFRQTHALQCGFC
                     TPGILMTLVPFLREYPDPGEAQIREALSAHLCRCTGYANIVAAVRLAAVEAPAS"
BASE COUNT          400 a          822 c          847 g          363 t
ORIGIN      
        1 cccgcgcagc ggattggcgc ggaccgcaag atcacccaga ctgatcccgc ggtgcggcac
       61 gcctttcacc gccacccgac cttcgcggaa ctcgagatcc tcgggcgcga cttccaagag
      121 ctcggccgcg agcgccgccg ccttggcgcg cacccgcagg gcggcttcat ggcacgcggt
      181 gcccgcgacc accgcgcccc ggctggcgaa ggtgccggta ccccacgaga actcgcgggt
      241 gtccccggta atcacatcga cccggccaac gtccacgccc agcacctccc ccacgatctg
      301 agcgaagctg gtgaagtgac cctggccctg ggttcctact ccggtagcca gccggatcgt
      361 cccgccgggt tcgaccgtca ctctggcgcc ctcgtagggg ccgatgccgg ttccttcgat
      421 gtaagtcacg agcccgatcc ccagccgccg gccctcggcc cgggctcggg gttgctcgtc
      481 ggccttgaac cgctcccaac cgatcgtggc cgcggcctga tccagcgccg ggaggtagtc
      541 gccgctgtcg taggtaagcg gagcggaatc ctgaaacagg atcccgtggt tgtgggggaa
      601 cgcctcgggg ggcaacaggt ttctccgccg gatctctacc gggtcgagtc ccaggtcgcg
      661 ggcggccagg tccaacagcc gttccatgac gaagactccg tgctgccggc cggctccacg
      721 gaccggggtc acgatggggc ggttggtgaa taccaccgtg aattcgctct cgtagttggg
      781 aacgttgtac tggcccagca aggtgcactg gctgttgatc gggacggtca ggccgtaggg
      841 gttgtaggcg ccggtgtcgt gcaggaacac gtcgcgcact cccaggatct ttccttcgcg
      901 gctgatcgcc agctcggcgt cgtggatctg gaggcgttcc tgcgtcgtcg cgaagaagtt
      961 ctcctgccgg tcctcgatcc atttgacggg gcggcccagt cgcatggcag cccatggcag
     1021 caggacttcc tcgggataga acatcatgat cttgggaccg aagccgccgc cgatgaacgg
     1081 cgcgatgacg cgaacctgcg actgccggag gcccagcatt cgcgccagac cattccggat
     1141 tggaatcggc gcctgggtcg tgtcccagac ggtgagctcc tcgtggcgcg ggtcccagga
     1201 gacgacgatg ccgcgattct cgatcgcgcc cgacaccccc cggtcgtagc ggaagcggcg
     1261 cgagatgatc cggccggccg cggcccgggc ggcggcccaa tcccctttgc gttggaccgc
     1321 gtgggcggcg aggttgctgc cgagctggtc gtgcaccaga gccgccccgg gcgcgagcgc
     1381 ggcctcgaga tcggtgaccg ccggcaaggg ctccagctcc accatcacat cggcagcggc
     1441 gtcttccgcg atgtagcggc tctcggccac caccagggcg agcggctcgc cgcagtgacg
     1501 caccttgtcc cgcaccagcg gtacctgggt cgcctcatgg tacaccactc cgggaatcgg
     1561 gaccggtccg accaggagcg gccccggccg ccagtactcg cccaggtcgg cggcagtgta
     1621 gaccgcgacc acgccgcttc gtttgagggc ggcggaggtg tcgatgccgc ggaggcgggc
     1681 gtgggcgtga tcgctgcgca ccagggccgc atgcagcatc cccggcagat gcacatcgtc
     1741 cacgaacagc gcccggccgg tgagcagctt ggggtcttca ttccgctgaa tgccctgccc
     1801 gaccaggccc gaaccggtgc tcacgaggcg ggtgcctcga cggccgccaa tcggaccgcg
     1861 gccacgatgt tggcgtaccc ggtgcaacgg cagagatggg cggagagggc ttcccggatt
     1921 tgggcctccc cggggtcggg atactcccgc aggaacggca ccagcgtcat gaggatgccc
     1981 ggagtgcaga agccgcactg gagcgcgtgc gtctggcgaa aggcggcctg gagcggatgg
     2041 agctcgccgc cttctgccag cccttccacg gtcgtcacct cccgaccgtc cgtctggacc
     2101 gcgaagacga ggcaggaacg caccgcctca ccgtcgagca gcacggtgca ggcgccgcag
     2161 acgccgtgct cacacccgac gtgggtgccg gtcagctcga ggtcgtggcg gaggaagtcg
     2221 ctgagcaaga gccggggctc cacctggcag tcgtgggtcc ggccattcac gctgacggaa
     2281 acgccgacca tccggactcc ggggaacagg aatcggtaac gtatcgatac tattgactgc
     2341 cgcaaggata gggagcagga agcagggagc aggaagcagg agcaaagagc agggagcagg
     2401 gagcaggaac agggaccagg ggcggggctg gt
//
LOCUS       DASWKS010000100         3954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2629926, whole genome shotgun sequence.
ACCESSION   DASWKS010000100 DASWKS010000000
VERSION     DASWKS010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3954
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629926"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VGA78_03095"
     CDS             complement(<1..209)
                     /locus_tag="VGA78_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892878.1"
                     /translation="MSRVLYTAVLAASLQACGGGDDGGPTGPPTPTSLTVVSGGQQNG
                     IVGQALAQPVVVRVNAGSQPATGVTL"
     gene            360..752
                     /gene="rpsL"
                     /locus_tag="VGA78_03100"
     CDS             360..752
                     /gene="rpsL"
                     /locus_tag="VGA78_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEX9892879.1"
                     /translation="MPTINQLVRHGRKKPTYKGKSPALKANPFRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLVHGYEIIAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGTL
                     DAAGVNGRRRSRSKYGAKAPKEAAGGKK"
     gene            749..1219
                     /gene="rpsG"
                     /locus_tag="VGA78_03105"
     CDS             749..1219
                     /gene="rpsG"
                     /locus_tag="VGA78_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEX9892880.1"
                     /translation="MSRRSRSVKRPVPPDPRYDSQTVSKFINNLMGRGKKGLAERVFY
                     SAMDMIEQRTSQPGVTVFKQAVSNAKPAVEVKSRRVGGASLQVPVEVRPERRTALAMR
                     WLIQFSRARNEKNMSERLAAELILASKGEGNTIKKKEDTHRMAEANRAFSHYRW"
     gene            1585..3681
                     /gene="fusA"
                     /locus_tag="VGA78_03110"
     CDS             1585..3681
                     /gene="fusA"
                     /locus_tag="VGA78_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX9892881.1"
                     /translation="MARQTPLDRYRNIGIMAHIDAGKTTTTERILYYTGKNYKIGEVH
                     EGAATMDWMEQEQERGITITSAATTCFWDRNDIRYRINIIDTPGHVDFTVEVERSLRV
                     LDGAVTLLDSVAGVEPQTETVWRQADRYNVPRLIFANKMDRIGADFTRCLKMIRDRLT
                     PRAFPVQLPVGAGETFTGHIDVLRRVEVVFDEVSLGKTFAEMPVPDVFKDAVEHARHE
                     LLEAAVEHDELLMEKYLSGAELSYQEIQQAIRKATVGGHIVPVLCGASFKNKGVQALL
                     DAVIDYLPSPMDVPAIQGHLPTHDETHVLRAPSDSEPFSALAFKIMTDPYVGRLTYFR
                     VYSGSIKSGSYVYNSTKDRRERIGRLLQMHANKRDEIEEVLAGDIAAAIGLKEARTGD
                     TLSAEDKPVILEAMKFPNPVIDVAIEPKTKADQDKLSLALQKLAEEDPTFRVRTDTET
                     GQTIIAGMGELHLEIIVERMRREFKVDANVGRPQVAYRETVTRRVEHVEGKFIRQSGG
                     RGQYGHVVIHLEPTPAGTGFIFEDKIVGGVIPREFIRPIEAGIKEALENGVLAGYPVV
                     DVKVELVFGSYHDVDSSEMAFKIAGSMAFKEAARSARPILLEPVMEVEVVTPAEFLGD
                     VMGDLSSRRGKIGGMVQRAEAQVVAADVPLGEMFGYSTTLRSMTQGRAVYSMQFDHYE
                     EVPKTVSEQIIAQATK"
     gene            3814..>3954
                     /locus_tag="VGA78_03115"
     CDS             3814..>3954
                     /locus_tag="VGA78_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX9892882.1"
                     /translation="MAKAKFERTKPHVNVGTIGHVDHGKTTLTAALTKVSAAKGWGTK
                     YIP"
BASE COUNT          775 a         1257 c         1318 g          604 t
ORIGIN      
        1 agcgtcaccc cggtggccgg ctgactgccc gcattgaccc ggacaacgac cggctgggcc
       61 agcgcctggc cgacaatgcc gttctgctgg ccccccgaca cgacggtcag gctggtgggg
      121 gttggcggac cggttggtcc cccatcgtcc ccccctccac aggcttgaag ggaggccgcc
      181 aacaccgcgg tatataggac gcgagacatc gtggtccaat ttagcatgcc ggtccagggg
      241 cgccccccta agtctctggc tccgcatcac ttgacctgag ccgaccgccc cagtaagtta
      301 tgagtctgcc gcaaaagcgg tttttggatt ctttacccca gcgggaacat cacggacgca
      361 tgccgaccat caatcagttg gtccgacacg ggcgcaagaa gccgacctac aagggcaagt
      421 cgccggcgct caaggcgaat cccttccggc gcggcgtctg cacccgggtc tacacgacca
      481 ctccgaaaaa gccgaattca gcgctccgca aggtcgccaa agtgcgcctg gtgcacgggt
      541 acgagatcat cgcgtacatc ccgggcgaag ggcacaatct gcaggagcac tcgatcgtgc
      601 tgatccgggg cggccgggtg aaagaccttc cgggcgtccg gtatcatatc gtgcgtggca
      661 cgctggacgc ggccggggtc aacggccggc gccgcagccg ttccaaatat ggcgccaagg
      721 cgcccaagga agccgccgga ggtaagaagt gagccggcgc tcccgttcgg tcaagcgccc
      781 ggtcccgccc gatccccgct acgacagtca gacggtctcc aagttcatca acaacctgat
      841 gggccggggc aagaagggtc tggccgagcg ggtgttctac tcggccatgg acatgatcga
      901 gcagcgcacc agtcagccgg gagtcaccgt cttcaagcag gccgtgtcca acgccaagcc
      961 cgcggtcgag gtgaagagcc ggcgggtcgg tggcgcttcc ctccaggtgc ccgtggaggt
     1021 gcgccccgag cggcgcaccg cgctggccat gcgctggttg attcagttct cccgggcccg
     1081 gaacgagaag aacatgtccg agcgcctggc ggccgagctg atcctcgcct cgaagggcga
     1141 aggcaacacc atcaagaaga aggaagacac ccatcggatg gcggaagcca accgggcctt
     1201 ctcgcactat cgctggtaag actcaacgga tccggcctga gggccaagga ccgggggcgg
     1261 ccaaacactc ggtctttggt ccggtgcaac gaggcgtcgc cactgggctt atgttggctt
     1321 cccccttgac tatgggtccc cttcggtaaa tctttgttgg ttctccggcc ggtggcagac
     1381 cggggagcgc gccgacccaa tttactcggc agacatcgga tgatgtgtcc ggatcgtctc
     1441 gggtacctct cgtccttcga acaacgcgtg gcgcccttca cgagggagcc catccgaccg
     1501 aagtcgttcg gatgcgcgcg gagcgatacc accggctggg ccgggttggt cgccccgctt
     1561 ttgtgttggg ttaacggaaa gcgaatggca cgacagacac cgctggatcg ataccggaac
     1621 atcggcatca tggcgcacat cgatgccggg aaaaccacga ccaccgagcg catcctgtac
     1681 tacaccggga agaactacaa gatcggtgag gtccacgagg gtgccgccac gatggactgg
     1741 atggagcagg aacaggagcg ggggatcacc atcacgtccg ccgccaccac ctgcttctgg
     1801 gaccggaacg atatccggta ccggatcaac atcatcgata cgcccggcca cgtcgacttc
     1861 acggtcgaag tggagcggtc gctccgggtg ctggacgggg ccgtcacgct gctggattcg
     1921 gtggccgggg tcgagccgca gaccgagacg gtgtggcgtc aggccgatcg gtacaacgtg
     1981 ccgcggctga tcttcgccaa caagatggac cgcatcgggg ccgacttcac ccgctgcctc
     2041 aagatgatcc gcgaccggct cacgccccgg gccttcccgg tccagctgcc ggtgggtgcg
     2101 ggcgagacct tcaccggcca catcgacgtc ctgcgccggg tcgaggtggt gttcgacgag
     2161 gtcagcctgg gcaagacctt cgccgagatg ccggtccccg acgtgttcaa ggacgcggtg
     2221 gagcacgccc gccacgagct gctcgaagcc gcggtagagc acgacgagct tctgatggag
     2281 aagtacctga gcggggccga gctgagctac caggaaatcc agcaggcgat tcgcaaggcg
     2341 acggtcgggg ggcacatcgt gccggtgctg tgcggggcgt ccttcaagaa caagggcgtg
     2401 caggcgctgc tggacgcggt catcgactac ctccccagtc cgatggacgt gcccgccatc
     2461 cagggccacc tcccgaccca cgacgagacc cacgtgctgc gggctccgtc cgacagcgaa
     2521 cccttcagcg cgctcgcgtt caagatcatg accgacccct acgtgggccg gctgacctat
     2581 ttccgagtgt attccggctc catcaagtcg ggcagttacg tctacaacag caccaaggac
     2641 cggcgggagc gcatcgggcg tttgctccag atgcacgcca acaagcggga cgagatcgag
     2701 gaagtgctgg cgggcgacat cgcggccgcg atcggcctca aggaagcccg caccggcgac
     2761 acgctctccg ccgaggacaa gccggtcatc ctggaggcga tgaagttccc caacccggtg
     2821 atcgacgtcg ccatcgagcc caagaccaag gccgaccagg acaagctctc cctggcgctg
     2881 cagaagctgg ccgaggaaga cccgacgttc cgggtgcgga ccgacaccga gaccggccag
     2941 accatcatcg ccggcatggg tgagctccat ctcgagatca tcgtcgaacg gatgcgccgg
     3001 gagttcaagg tcgatgccaa cgtgggccgg ccccaggtcg cctaccgcga gacggtgacc
     3061 cggcgggtgg agcacgtcga gggcaagttc atccggcagt cgggtggcag aggccagtac
     3121 ggtcacgtgg tgatccacct ggagcccacg ccggccggca ccgggttcat cttcgaggac
     3181 aagatcgtcg gcggcgtcat cccgcgggag ttcattcggc cgatcgaggc ggggatcaag
     3241 gaagccctcg agaacggcgt gctggcgggc tatccggtgg tcgatgtgaa agtcgagctg
     3301 gtcttcggca gctaccacga cgtggacagc tccgaaatgg cgttcaagat cgccggatcg
     3361 atggcgttca aggaggcggc gcgcagcgcc aggccgatcc tgctcgagcc ggtgatggag
     3421 gtcgaggtcg tcaccccggc cgagttcctg ggtgacgtga tgggtgatct ctccagccgt
     3481 cgcggcaaga tcggcggcat ggtccagcgg gccgaggcgc aggtggtcgc ggccgatgtc
     3541 ccgttgggcg agatgttcgg atactccacg accctccggt ccatgaccca gggacgggcg
     3601 gtgtactcga tgcagttcga ccactacgag gaagtaccga agacggtgtc ggaacagatc
     3661 atcgcccagg cgaccaaata ggtcgaaggc ggtcgaagac agtcgaaggc ggtcgaagcc
     3721 gggtgaggct gaaaccgcac gcagtaccag gtacccagca ccgcacccgg aacgtggaaa
     3781 cccggaacgc ggaaccatca gggagtaagg accatggcca aggcaaagtt cgagcgtacc
     3841 aagccccacg tgaacgtcgg cacgattggc cacgtggacc acgggaagac gacgttgacg
     3901 gcggcgctga ccaaggtgtc ggcggccaag gggtggggga cgaagtacat cccg
//
LOCUS       DASWKS010000101         7880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_44426, whole genome shotgun sequence.
ACCESSION   DASWKS010000101 DASWKS010000000
VERSION     DASWKS010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7880
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44426"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1123
                     /locus_tag="VGA78_03120"
     CDS             <1..1123
                     /locus_tag="VGA78_03120"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEX9892883.1"
                     /translation="VLSWGPLILGHAHPEVVRAIQQTAARGTSYGTPTEIELDLARRV
                     IERIPSVEMIRFVSSGTEATMSAIRLARAATRRRVIVKFEGCYHGHADPLLAAAGSGV
                     ATLGLPDSPGVPEGAVADTALVPFNDLAAVEALFEQRGEEIAAVIVEPVAGNMGVVPP
                     VAGFLEGLRGLTSRHGALLIFDEVMTGWRVHPLGAQGLYGIRPDLTCLGKVIGGGLPA
                     AAFGGRRDLMELIAPSGPVYQAGTLSGNPLAMAAGLATLDALDRPGVWESAETFAAEA
                     AEALVAEAGDAGLAVTVHRVGTMLTPFFGAGPVRNYDEVKRTDRSSYARFFHAMLEAG
                     VYLPPSAFEAWFTSAAHGEAELPVFRQAVQAAFRALQQG"
     gene            1126..2070
                     /gene="hemC"
                     /locus_tag="VGA78_03125"
     CDS             1126..2070
                     /gene="hemC"
                     /locus_tag="VGA78_03125"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEX9892884.1"
                     /translation="MSRRLRLGTRGSRLARWQAEWVRDHLSAAGHEAELVEISTTGDA
                     LTDVPLSDLGASDSFTRQIDEALLGGRVDLAVHSLKDLPTTLPDGITLAAVSRREDPR
                     DALVGRGPLRLDQIPVGAVIATCSLRRRAQLLRARPDLTLVDIRGNIETRLAKLDQNP
                     VWTATILAVAGLARLGLSNRIGERLDPALMLPAPGQGALAVTARANDPSAGSAARQGI
                     HHAATAVLVSAERAVLHHLDSGCHAPVAALAQDGGTEGVHLFGRVLSLNGEQSVEANM
                     TAPVGTDAEARALGASLAEHLLELGAAELLPRSESVES"
     gene            2070..2801
                     /locus_tag="VGA78_03130"
     CDS             2070..2801
                     /locus_tag="VGA78_03130"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEX9892885.1"
                     /translation="MRVVLTMGQDTLTGLAEALGAMGLEVKQRPLISFLPLGDWGSFD
                     HALLDLDSFNAIAVTSPRAAAVLAARIPRKPCPVPVWVTGETTAALLADTMKTVHLVE
                     PRGDQGAAEAVAEAMISAGVASPVFFPCGDRRRDALVIRLRAAGFEVRSELCYHSVIA
                     SAEETRAACEETDVVVVGSPSVARRLASSVDARARPRLVALGHSTATEAEHAGWKPDA
                     VATHPTVEAVVTALTSPSRPQPSAS"
     gene            2798..3877
                     /gene="hemE"
                     /locus_tag="VGA78_03135"
     CDS             2798..3877
                     /gene="hemE"
                     /locus_tag="VGA78_03135"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEX9892886.1"
                     /translation="MNDLLLKACRRQPVPRPPVWLMRQAGRYLPEYRVIRARHDFLTM
                     VRTPELASQVTLQPVDRLGVDAAIIFSDILVIPMALGMTLSVEEGVGPVLHRPLRSER
                     DIGRLRPFDPEGELSYLLDAIRMTRAALGGRVPLIGFAGAPWTLAGYMVEGAGTREWR
                     AIKRLIAEAPATAHRLLDLLTEAVGRTLVAQAAAGVQVLQIFDSWAGALAPRDFDRFA
                     LPYLARAARSVRATGLPVIVFAPGADWALESIAKETGADVVSIGWHTRPAEARSRLAS
                     FDVACQGNFDPAWLYSDPDVIRERVREMIAEFGVQGYIANLGHGVLKDTPVEHVQEFV
                     SAVQGWKSSGSERSERSEKSEAGLT"
     gene            3968..5026
                     /gene="hemA"
                     /locus_tag="VGA78_03140"
     CDS             3968..5026
                     /gene="hemA"
                     /locus_tag="VGA78_03140"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEX9892887.1"
                     /translation="MASWPPLHVIGITHRKADLGLRERFARSPEDIAALLSGDGAADR
                     TGVVLSTCNRFEVYWWGEADWAEWFLTLADRSGPPIPRAAVVRQRALPAVRHLFGVAA
                     GLDSQVLGETEILGQVRRAWGLSRDLGATSRELDLIFAAAIAAGRRVRRETALGRHPA
                     SVGSVAVQEASAECKGLAGRMVVVVGAGEAARAVAAALLAAGARTHAVSRHVDRALAL
                     ARSYPVVVEPWDQLDRLIAEADVMIAATSAPHAFLSTDRLQAAGGGRDQPLVLIDLGV
                     PRNVDADARSLPGMKILDLDDLRNRGSGRLLELNPGLDAARLILERELVRLLVKLERW
                     SAPVTEPGEPRARADSAG"
     gene            complement(4980..5474)
                     /locus_tag="VGA78_03145"
     CDS             complement(4980..5474)
                     /locus_tag="VGA78_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HmuY family protein"
                     /protein_id="HEX9892888.1"
                     /translation="MAQGTGARIVLFSGLGLFVALLGYLIAASLTRRAAPVFTPSPAG
                     VPLGDGTGLDTVTVQAQDQNLWRYVDLDQGIISPPGDSTGWDLAIRRFHVRVASPPGD
                     LGKWYHYGMLSHLLESADETYVVATGIGRTALVEILSYYCPGLEAGCLTLRYRLEPAA
                     PPVP"
     gene            5644..6675
                     /locus_tag="VGA78_03150"
     CDS             5644..6675
                     /locus_tag="VGA78_03150"
                     /inference="COORDINATES: protein motif:HMM:NF018484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HEX9892889.1"
                     /translation="MTVPAHQYVRFLFLRVAPGWRELDAGAQRASRRELGETILRHRA
                     RMLVRTFSLSGTRGDSDLMLWQASDSIDAFQNLQTEIFSTRLGTHLSIPHSFLGTVRR
                     SVYELPEESASAGRVTLRPQDSRYLFVYPFVKTREWYALPMERRQAMMEEHIRVGRRH
                     PAFRLNTLYSFGLDDQEFVLAFEGDDPSDFVSLVMELRETEASRYTLRDTPAFTCIQM
                     SIWDALDSLGGALEAVAEPSGPDDGFVPVAELHEIPNGGARRVYRGHDAIALFRVNGR
                     LHAVSDRCTHGRGSLSEGVLDPARCVLTCPWHGGQFDITSGEPLQGPVRAPIRVYQVK
                     LDGKRILVR"
     gene            6650..7585
                     /gene="hemH"
                     /locus_tag="VGA78_03155"
     CDS             6650..7585
                     /gene="hemH"
                     /locus_tag="VGA78_03155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX9892890.1"
                     /translation="MASASWSDSRPRFAVLLVAYGSPRNLDEVAPYLHDVRGGRPTPP
                     EVVEELRHRYAAIGGGSPLQSRTESQARSLAGTLNGTPVYVGMRHWHPYIADVMDRIR
                     SDGHEKIVAIPMAPHYSHLSIGAYQNAIEAARRNAAVRMVQQWFDHPAFLDAVAARVR
                     EGLEHFSPESRDRVALVFSAHSLPQRILAQGDPYPDQLRASVDGVMARLGRSEARIAY
                     QSAGRTNEPWLGPDAALVLHQLAAAGRRDVLLCPIGFVSDHLEVLYDVDIELKALAGT
                     LDLNLQRTESLNDSPLLIAALAGLVRDAAAAAGWV"
     gene            7585..>7880
                     /locus_tag="VGA78_03160"
     CDS             7585..>7880
                     /locus_tag="VGA78_03160"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9892891.1"
                     /translation="MRVAVVGGGLAGLTAAHALAAAGAEVKLLEASTRLGGQVWSERV
                     DGFLVEHGAEGFPARRTAIRGLCQQLGLGHRLLEQNAHRNLCLRNGRLEELGPG"
BASE COUNT         1197 a         2618 c         2758 g         1307 t
ORIGIN      
        1 ggtgctatcc tggggcccgc tgatactggg tcatgctcat cccgaggtcg tccgggcgat
       61 tcagcagacg gcagcgcggg gaaccagcta cgggacgccg accgagatcg agctggacct
      121 ggcccgacgg gtcatcgagc ggatcccctc ggtggagatg attcgcttcg tgagctccgg
      181 caccgaagcc accatgagcg ccatccgcct ggcgcgggcc gccaccagac gccgggtgat
      241 cgtcaagttc gaggggtgct atcacggcca cgccgacccg ctgctcgcgg ccgcgggatc
      301 gggcgttgcc acgctgggcc tgccggattc acccggcgtg cccgaaggag cggtggccga
      361 taccgcgctg gtgcctttca acgatctcgc cgcggtcgag gcgctattcg aacagcgggg
      421 cgaagagatc gccgcggtca tcgtcgagcc ggtcgccggg aacatgggcg tggtcccccc
      481 ggtggccggc ttcctcgagg ggcttcgcgg cctcacctcc cgccacggcg cgctgctgat
      541 cttcgacgag gtgatgaccg gctggcgggt gcatccgctg ggcgcgcagg gactctacgg
      601 gatccggccc gacctcacct gtctggggaa ggtcatcggg ggcggattgc cggccgcggc
      661 gttcgggggc cggcgtgatt tgatggagct gatcgctccg tcgggtccgg tctaccaggc
      721 cgggaccctc tcgggaaatc ctctcgcaat ggccgccggt ctggcgacgc tcgacgcgct
      781 ggatcggccg ggcgtctggg aatcggccga gacattcgcc gcggaggccg ccgaagccct
      841 cgtggccgag gccggggacg ccggtctggc ggtaaccgtt caccgggtgg gaaccatgct
      901 gacgccgttt ttcggcgccg gcccggtccg gaactacgac gaggtcaagc gtaccgaccg
      961 gtcgagctat gcgcggttct ttcacgcgat gctcgaggcc ggggtctacc tgcccccctc
     1021 ggcgttcgaa gcctggttta cgtcagccgc gcacggtgag gccgagctgc cggtattccg
     1081 tcaggcggtg caggcggcct ttcgggccct gcaacaggga tgagcatgtc gcgccggctt
     1141 cgattgggta cccgcgggag ccgattggcc cgatggcagg cggaatgggt tcgagatcac
     1201 ctttccgcgg ctgggcacga ggccgagctg gtcgagatca gcaccaccgg tgatgcactt
     1261 accgacgtgc cgctgtcgga tctgggcgcg agcgacagct tcacccgcca gatcgacgag
     1321 gcgctgctgg ggggacgggt ggatctcgcg gtgcactcac tcaaggatct tcccacgact
     1381 ctgcccgacg ggattacgct ggcagcggtg agcaggcggg aagatccccg cgatgccctg
     1441 gtgggccgcg ggccgctccg attggaccag atcccggtcg gggcggtaat cgcgacctgc
     1501 agcctgcgcc ggcgggctca attgctgcga gcccggccgg acctcaccct ggtggacatc
     1561 cggggcaaca tcgagactcg gctggcgaag ctggatcaga acccggtgtg gaccgcgacc
     1621 atcctggcgg tggccggcct ggctcgactg ggattgtcga atcggatcgg ggagcggctg
     1681 gacccggccc tgatgcttcc ggcgccggga caaggcgcat tggccgtgac tgcacgagca
     1741 aatgacccat ccgccggttc cgccgcccgc caggggatcc accatgccgc caccgccgtg
     1801 ttggtcagcg cggaacgggc ggtcctgcac catctcgaca gcggctgtca cgcaccggtg
     1861 gcggctttgg cccaggacgg tggaacggaa ggggtgcacc tgttcgggcg ggtcttgtca
     1921 ttgaacggcg aacagtcggt cgaggccaac atgacggctc cggttggcac cgacgcggag
     1981 gcgagggcac ttggcgcctc gctcgcggag cacctgctgg agctgggcgc ggccgagctg
     2041 ctcccgcgct cggaatcggt ggagtcgtga tgcgggtcgt tctcaccatg ggccaggata
     2101 cgttgaccgg actcgccgag gcgctgggag ccatgggcct ggaggtgaag cagcgcccgt
     2161 tgatctcgtt tctcccgctc ggtgactggg gctcgttcga ccatgcgctt ctggacctcg
     2221 actcgttcaa cgcgatcgcg gtaacgtcac cccgcgcggc cgcggtgctg gcagctcgaa
     2281 tcccgcggaa accgtgcccg gtaccggtat gggtcaccgg cgagaccacc gcggcgctgc
     2341 tggccgacac catgaagacc gtgcacctcg tggagccccg cggcgaccag ggcgccgccg
     2401 aagccgtcgc cgaggcgatg atcagcgcgg gggtggcttc cccggtgttc ttcccctgcg
     2461 gtgaccgccg gcgcgatgcg ctggtgatcc ggctccgagc ggcggggttc gaggtccgga
     2521 gcgagctgtg ttatcacagc gtcattgcat cggcggagga gacgcgcgcc gcctgcgaag
     2581 aaacggatgt ggtggtggtg ggcagcccca gcgtggcgcg acggttggcc agcagtgtcg
     2641 acgccagggc gcgcccccgc ctggtggcgc tggggcacag taccgccacc gaagcagagc
     2701 acgccggatg gaagcccgat gccgtcgcca ctcatcccac cgtcgaggcg gtcgtgaccg
     2761 cattgacgag cccgtcccga cctcagccct cggcttcgtg aacgatctgt tgctcaaggc
     2821 gtgccgccgc caaccggtgc cccggccccc ggtgtggttg atgcggcagg ccggccgcta
     2881 cctcccggaa taccgcgtca tcagagccag gcatgacttc ctcaccatgg tccgaacgcc
     2941 tgagctcgca tcccaggtca ccctccaacc ggtcgaccga ctcggggtgg atgccgcgat
     3001 catcttcagc gacatcctgg tgattcccat ggcgctggga atgacactga gcgtggaaga
     3061 gggtgtgggc cccgtgttgc atcgacccct gcgatccgaa agggacatcg ggcggcttcg
     3121 cccgttcgat cccgagggtg agctgtcgta tctgctcgac gccattcgga tgacccgcgc
     3181 tgccctgggc ggacgggttc cactcatcgg gtttgccggc gcgccctgga ccctggccgg
     3241 ttatatggtg gagggagcgg gtacccggga atggcgggcg atcaagcggc tcatcgctga
     3301 ggcccccgcg acggcccacc ggctgctgga cttgctgacc gaagcggtcg gccggaccct
     3361 ggtggcgcaa gccgccgccg gagtccaggt actgcagatc ttcgattcat gggccggcgc
     3421 gctggcaccg cgggacttcg accggttcgc cctcccctat ctggcccgag ccgcccgatc
     3481 cgtgagagcg acgggactgc cggtcatcgt ctttgcaccc ggggcggact gggccctcga
     3541 gtcgattgca aaagagaccg gggccgatgt cgtcagcatc ggctggcaca cccggccagc
     3601 ggaggctcgc tcccgcctcg cctcgttcga cgtggcctgt cagggcaact tcgatccggc
     3661 atggctctac tcggacccgg atgtgatccg ggaacgggtg cgcgagatga tcgctgagtt
     3721 cggagtgcag gggtacatcg ccaatctggg gcacggggtg ctcaaggaca caccagtgga
     3781 acatgtccag gagttcgtca gtgccgtaca gggctggaaa tcatcggggt cggaaaggtc
     3841 ggaaaggtcg gaaaagtcgg aagccggact cacgtgacga aagtttccga cccttacgac
     3901 ccttccaacc ctaccgactc agtttccgac ctttccgacc caatgccaag gtcgtagaat
     3961 agagccaatg gcctcctggc cccccctcca tgtgatcggc atcacccacc gcaaggcgga
     4021 tctcgggctc cgcgagcgct tcgcgcgttc acccgaggac atcgccgctc tcctcagcgg
     4081 agacggcgcc gcggaccgga ccggcgtggt gctgtcgacc tgcaatcgat tcgaggtcta
     4141 ctggtgggga gaagcggact gggccgagtg gttcctcacc ctggctgatc ggtcgggccc
     4201 tcccataccc cgagccgcgg tggtgcggca gcgagcgctg ccggcggtgc ggcacctctt
     4261 tggcgtggca gcgggactcg actcccaggt cctgggagaa accgagatcc tgggccaggt
     4321 ccgccgggcc tggggactct cccgtgatct gggggcaacc tcgcgcgagc tggacctcat
     4381 cttcgcggcg gcgattgccg ccggacggcg ggtgcggcgc gagaccgccc tgggacgcca
     4441 tccggcgtcc gtcgggtcgg tggcagtcca ggaggcgtcg gccgagtgca agggtctggc
     4501 gggccgcatg gtggtggtgg tcggcgcggg agaggcggcg cgtgcggtgg cggcggcgct
     4561 cctggccgca ggagcccgaa cccatgcggt cagccgccac gtcgaccggg ccctggccct
     4621 ggctcggagc tacccggtgg tggtggagcc ctgggatcag ctcgaccggt tgatcgccga
     4681 ggccgatgtg atgatcgccg ccacctcggc tccccacgcc ttcctttcca ccgaccggtt
     4741 gcaggcggcc ggcggcggcc gcgatcagcc tctggtgttg atcgacctgg gcgttcctcg
     4801 caacgtcgat gccgatgccc ggtcattgcc ggggatgaag attctggatc tggatgatct
     4861 ccgaaaccgc ggaagcgggc gactgctcga gctcaatccg ggactggacg cggcccgcct
     4921 gattctggag cgggagctgg tgcgtctgct ggtgaagttg gagcgctgga gcgctccggt
     4981 cacggaaccg ggggagccgc gggctcgagc cgatagcgca gggtgaggca ccccgcctcg
     5041 agaccgggac agtagtagct caagatctca accaaagcgg tgcggccgat gccggttgcc
     5101 acgacgtagg tctcatcggc tgattccagc aggtgcgaca gcatcccgta gtggtaccac
     5161 ttcccgaggt cccccggcgg cgacgctacc cggacgtgga atcggcggat ggccagatcc
     5221 cacccggtcg agtcccccgg tggggagatg atcccctggt caaggtcgac gtagcgccac
     5281 aggttctgat cctgagcctg gaccgtcacg gtgtcgagcc cggtgccgtc gcccagcggg
     5341 actccagccg gcgacggtgt gaacaccggc gccgcgcggc gggtgagcga ggccgcgatc
     5401 aggtagccca gcagggccac gaacaggccc agcccgctga acaacacgat ccgggccccg
     5461 gtgccctgcg ccatgagatc tcctcgctgg caaacgtgtc ggaagggtcg gaaaggtcgg
     5521 aaaagtcgga agccggactc aggtggcgaa ggttttccga cgcttacgac cttccgaccc
     5581 tttccgacgg ttctactggg gaacgccgaa tcttgagcgg catggctctt ttctgaaagc
     5641 tcaatgaccg tcccggccca tcagtatgtc cggttcctgt ttctcagggt cgctcccggc
     5701 tggcgagagc tggatgccgg ggcgcaacgc gcctcccggc gggagctggg cgagaccatc
     5761 ctgcgccacc gcgcccgcat gctggtccgg accttcagcc tgtcaggcac ccggggcgac
     5821 tccgatctga tgctgtggca agcctcggat tccatcgacg cctttcagaa cctccagacc
     5881 gagatcttct cgactcgtct gggaacccac ctctcgatac cccacagttt cctcggcacg
     5941 gtacggcggt cggtgtacga gctgcccgag gagtcggcga gcgccggccg ggtcacgctg
     6001 cggccccagg actcgcgcta cctgttcgtc tatcccttcg tcaagacccg ggagtggtac
     6061 gccctcccga tggagcggcg tcaggcgatg atggaggagc acatccgggt cggccggcgc
     6121 catccggcct tccgactgaa tacgctctac agcttcggac tggacgatca ggaattcgtg
     6181 ctggcgttcg agggcgacga tccctccgat ttcgtgtcgc tggtgatgga gctgcgggag
     6241 acggaggcct cgcgctatac cctgcgggac acccccgcct tcacctgtat ccagatgtcc
     6301 atctgggatg cgctcgattc gctcggcggc gcgctcgagg cggtggccga gcccagcggc
     6361 ccggatgatg gtttcgttcc cgtggccgag ctccatgaga tccccaacgg cggagcgcgg
     6421 cgggtatatc ggggccacga tgccatcgca ctgttccggg tgaacgggcg gctgcacgcg
     6481 gtcagcgatc gctgcaccca cggccgcggg tcgctgagcg agggcgtcct ggacccggcc
     6541 cgatgcgtgc tgacctgtcc ctggcacggt ggccagttcg atatcacgag cggcgagccg
     6601 ctccagggac cggtgcgggc gccgatccga gtctatcagg tgaagctgga tggcaagcgc
     6661 atcctggtcc gatagccggc cgcggttcgc ggtgctgctg gtggcgtacg gcagcccgcg
     6721 caacctcgac gaagtggccc cctatctcca cgatgtgcgc gggggccggc ccactccgcc
     6781 cgaagtggtg gaggaactgc gccaccgtta tgcggccatc gggggcggct cgcccctgca
     6841 gagccggacc gagtcgcagg cccgctccct ggcggggacc ctcaatggca cgcccgtcta
     6901 cgtggggatg cgacattggc acccctacat tgccgacgtg atggatcgca tcaggtccga
     6961 tggccatgaa aagatcgtcg cgattcccat ggctccccat tactcccacc tgagcatcgg
     7021 cgcctaccag aacgccatcg aagccgctcg ccggaatgcg gcggtcagga tggtgcagca
     7081 gtggttcgat catccggctt ttctcgacgc ggtcgccgcc agggtccgcg aaggcctgga
     7141 gcatttttcc cccgagtcac gcgatcgggt tgcgctggtc ttcagcgccc acagtcttcc
     7201 ccaacggatc ctggcccagg gcgatcccta tcccgaccag ctccgagcca gcgtcgacgg
     7261 cgtaatggcc cgcctgggac gatccgaagc gcgcatcgca taccagagcg ccggccgcac
     7321 caatgaaccg tggctggggc ccgacgccgc cctggttctg caccagctgg cggccgccgg
     7381 ccggcgcgac gttctgctct gccccatcgg attcgtgagc gatcatctcg aagtgctgta
     7441 cgacgtggat atcgagctca aagccctggc cggcaccctg gacttgaacc tgcaacgcac
     7501 cgaatccctg aacgacagcc ccttgctgat cgcggccctg gccggtctgg tccgcgatgc
     7561 cgccgccgcc gccggctggg tctgatgcgg gtcgccgtgg tcgggggagg actggccggt
     7621 ctcaccgcgg ctcacgcgtt ggccgcggcc ggcgccgagg tgaagctcct ggaggcgtcg
     7681 acccgactgg gcgggcaagt ctggagcgaa cgggtcgatg gctttctggt ggagcacggc
     7741 gcggaaggtt tcccggcccg gcgcactgcc attcgcgggc tctgtcaaca attggggctg
     7801 ggccaccgcc tgctggagca gaacgcgcat cgcaacctgt gtctccgcaa tggccggttg
     7861 gaggagctcg gccccggtga
//
LOCUS       DASWKS010000102         6260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1522214, whole genome shotgun sequence.
ACCESSION   DASWKS010000102 DASWKS010000000
VERSION     DASWKS010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1522214"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VGA78_03165"
     CDS             <1..672
                     /locus_tag="VGA78_03165"
                     /inference="COORDINATES: protein motif:HMM:NF017555.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HEX9892892.1"
                     /translation="DLAIDVWGADHHGYIARLRAVLKALGYPDDFFDVALVQLVKVVK
                     GGEEIRMSKRAGDFVTLRELSDEVGVDAARYFFLMRRGDTPFSFDVDLATRQTDENPV
                     FYVQMAHARMSGIFRVADLDPAAVGPAIDLSALPAALDAELAKALPAFVDVVARAARE
                     REPHRVCAFLEDLARVVHGWYHHCRVLGEPPEIQRNRLVLARAARTVLANGLAILGLS
                     APDRM"
     gene            675..1595
                     /locus_tag="VGA78_03170"
     CDS             675..1595
                     /locus_tag="VGA78_03170"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX9892893.1"
                     /translation="MSLVVVGSIALDSVFTPFGETADALGGSAIYFSVAGSLLHPVRV
                     VGVIGDDYPVDELERLAPRGIDWSGVERAPGESFRWKGKYSYDLQSRETLETRLGVFA
                     EFAPRLPDGWHDAQYVFLGNIDPVLQLGVLKQIQQPRLVACDTMNYWIKGKRAELLEL
                     LKRVDILMVNDTEARELSGDWNIHRAGRWILGQGPRRVVIKQGEYGALLMEPDRTFYV
                     PAFPLEEVFDPTGAGDAFAGGFMAYLARSGDISADAMRRAMVYGAAMGSYAVAGFGVR
                     GFDTLTLADLVQRVRQFTDLTHVPAAERIE"
     gene            1592..2617
                     /gene="purM"
                     /locus_tag="VGA78_03175"
     CDS             1592..2617
                     /gene="purM"
                     /locus_tag="VGA78_03175"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEX9892894.1"
                     /translation="MTERQYAAAGVDLQTAEASKERIARLVAGTRTPLALGVVGAFGG
                     MVRVPAGMRRPVLVMSTDGVGTKVLVAREAARLDSVGEDLVNHSVNDILVHGARPIAF
                     LDYLAGSALAVDQITALVEGVARGCRAHDMVLAGGETAQMPGLYQPGHFDLAGTIIGV
                     VEEDQALHGDRIVPGDVLLGYGSTGLHTNGYTLARRIGFERLGHRIDSYIPELGTTLG
                     DALLAVHRSYWRAVAPVLGRVHGLAHITGGGIPGNLVRVLPPDCEAVVEMGGWPVPPI
                     FQFLQQGGDVSDEEMRDVFNLGIGLIAVVPAAAAAALRDAATSAGVVTWVIGGVRAGA
                     TGVRFTG"
     gene            2667..3755
                     /gene="ribD"
                     /locus_tag="VGA78_03180"
     CDS             2667..3755
                     /gene="ribD"
                     /locus_tag="VGA78_03180"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEX9892895.1"
                     /translation="MTEAEAMRRALELAWRGWGRVHPNPMVGAVVLREGQIIGEGWHA
                     EFGGAHAEVEALANVSAAAAEGATLVVTLEPCRHHGKTPSCTEAIFDAGIARVVFGAD
                     DPSPEARGGAAQLADVGIQVDRVPVENQVRRQNAAFFHELRHPTRPFVALKLATSIDA
                     RLADYTGRSHWLSAKKARDWVHWLRAGFDAIAVGGRTARVDNPSLTVRGPVSPRVPPR
                     RVVFDRHAHLAGATTLLGSAREIPVLLVCEGTPVPDQAAEYAQAGVDILEAGNLTLAL
                     QGLYARGVKSLLVEGGGRLAGRLLGAGLIDRFYWLQTPLWLGEGGVPAFAGLHGELLE
                     QVYRWTPVERRSLGPDTLLVLDRQHSGQ"
     gene            complement(3802..4173)
                     /locus_tag="VGA78_03185"
     CDS             complement(3802..4173)
                     /locus_tag="VGA78_03185"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX9892896.1"
                     /translation="MADGSGTTGIWVMNADGSGVTQLTGGSNEDEEPGWSPDGTRIVF
                     SRDSQIWVINANGTGQVRLTSNAIDGDPVWSPDGSKIAFTRGPNGNRQIYVVFVANPS
                     DVRLRHQQLGENENLDWVRKP"
     gene            complement(4166..4816)
                     /locus_tag="VGA78_03190"
     CDS             complement(4166..4816)
                     /locus_tag="VGA78_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892897.1"
                     /translation="MLATLAPIDSALRILGRAERLLSPNDRELESAPRCTRAPLLVAA
                     GKPGAQVDADRGLALARRVGDLRLQGLCWQALGSYRFINVDDPAVSAPPLDSAETHQR
                     KARDLAGLAETLAWSGYDHFSFFDHGPALADLTLAIEFARRSSNRFAEAWAFRLKGSI
                     GWRTGALPHAARDLHAAENLARDFGDRPQLLNARRMLGKRGVGLLPRWRQDRLHGG"
     gene            5127..5720
                     /locus_tag="VGA78_03195"
     CDS             5127..5720
                     /locus_tag="VGA78_03195"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEX9892898.1"
                     /translation="MFTGIVTAIGRVKSTTRTREGMTLAIAVPWRRLALGESIAVDGV
                     CLTVVQKGKGWFKVQVVDTSLDRTRFRDYGAGDRVNLERALQVGDRLGGHLVQGHVDG
                     IARVARVVNRKDARVLDLVVPAEVARVSVPLGSITLDGVSLTVVEKPGRTTIRISLIP
                     FTLQHTTLGRLRAGSRVHVEGDIIGKYVEGLLTPRAS"
     gene            5717..>6260
                     /gene="ribB"
                     /locus_tag="VGA78_03200"
     CDS             5717..>6260
                     /gene="ribB"
                     /locus_tag="VGA78_03200"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEX9892899.1"
                     /translation="MTSDPRYGTIEQAIEDLRNGKVIIVADDRDRENEGDFVCAAQLV
                     TPEVVNFMAQHGRGLICLALTPERCDQLGLPQMTEQSTEELGTAFTVSIDADKRFGVS
                     TGISAADRARTIQIALNPETQKADLRRPGHVFPLRARPGGVLQRVGHTEASVDLARLA
                     GLLPAGVICEILNRDGTMARQ"
BASE COUNT          957 a         2034 c         2232 g         1037 t
ORIGIN      
        1 gatctggcca tcgacgtgtg gggcgccgac caccacggct acatagcccg gctgcgcgcc
       61 gtgctcaagg cgttaggcta tcctgacgat ttcttcgacg tggcgctggt gcagctggtg
      121 aaggtggtga agggcgggga agagatccgc atgtccaagc gggccggcga cttcgtcacc
      181 ctgcgcgagc tgagcgatga ggtgggggtg gacgcggcgc ggtatttctt tctgatgcgc
      241 cggggtgaca cgccgttcag cttcgacgtc gatctggcga cccggcagac cgatgagaat
      301 ccggtgttct acgtccagat ggcgcatgcc cgcatgagcg ggattttccg ggtggccgac
      361 ctcgatcccg cggccgtggg tccggccatc gatctctcgg ccttgccggc cgcgctggat
      421 gccgagctgg ccaaggccct gccggcgttc gtcgatgtcg tggcccgcgc ggcgcgggag
      481 cgggagccgc accgggtctg cgcctttctg gaggatctgg cccgggtcgt gcacggctgg
      541 taccaccact gccgggtgct gggcgaaccc cccgagatcc agcggaatcg cctggtgctg
      601 gcccgcgcgg cccggaccgt tctcgccaat ggtctggcaa ttctcggctt gagcgccccc
      661 gatcggatgt gaggatgagc ctggttgtgg ttggcagtat cgccctcgac tccgtgttca
      721 cgcccttcgg cgagacggcc gatgccctgg gcgggtccgc catctacttc agcgtggccg
      781 gctcgctgct ccacccggtg cgggtggtgg gcgtgatcgg ggacgactac ccggtggacg
      841 agctggagcg gctcgccccc cgggggatcg actggagcgg ggtggaacgg gccccgggcg
      901 aaagcttccg ctggaagggg aagtactcct acgatctgca gagccgtgag acgctggaga
      961 cccgcctcgg ggtgttcgcc gagttcgccc cccggctgcc cgacggctgg catgacgccc
     1021 aatacgtctt tctcggcaac atcgatccgg tgctgcagct cggagtgctg aagcagatcc
     1081 agcaaccccg cctggtggcg tgcgacacca tgaactactg gatcaagggg aaacgggccg
     1141 agctgctcga gctgctcaaa cgggtcgaca tcctgatggt gaacgacacc gaggcgcgcg
     1201 agctctcggg cgattggaac atccatcgcg cgggtcgctg gattctggga cagggtcccc
     1261 ggcgggtggt gatcaagcag ggcgagtacg gcgccctgct gatggagccc gatcggacct
     1321 tttatgtgcc ggcgtttccg ctggaggagg tgttcgatcc gaccggcgcc ggcgacgcgt
     1381 tcgccggcgg gttcatggcc tacctggccc gctcggggga catctcggcc gacgccatgc
     1441 ggcgcgccat ggtgtatggc gcggcgatgg gatcctacgc cgtagccggt ttcggggtgc
     1501 gtggattcga cacgctgacc ctggctgacc tggtccagcg ggtccgtcag ttcaccgacc
     1561 tgacccacgt gccggccgcg gagcggatcg aatgaccgaa cggcagtacg cggccgccgg
     1621 ggtggacctc cagaccgccg aagccagcaa agagcggatt gcccggctgg tggcggggac
     1681 ccgaacgccg ctggcgctgg gcgtcgtcgg cgctttcggc ggcatggtcc gggtgccggc
     1741 cggcatgcgg cgtccggtcc tagtcatgag caccgacggc gtcggcacca aggtgctggt
     1801 ggcccgggaa gccgctcggc tcgacagcgt gggcgaagac ctggtcaatc acagcgtcaa
     1861 cgacatcctg gtccacggag cccgtccgat cgcgttcttg gactatttgg cgggatcggc
     1921 cctggccgtc gaccagatta ccgccctggt ggaaggcgtg gcgcggggct gccgggcgca
     1981 cgacatggtg ctggccggcg gcgagaccgc tcagatgccc gggttgtatc agcccggcca
     2041 cttcgatctg gcggggacca tcatcggcgt ggtggaagaa gaccaggcgc tccacggcga
     2101 tcggatcgtc cccggcgacg tgctgctagg gtatggttcc accggattgc acaccaacgg
     2161 ttacaccctg gctcgtcgca tcgggttcga gcggttgggg caccggatcg attcatacat
     2221 tcccgagctc gggaccaccc tgggcgacgc gttgctggcg gtgcaccggt cgtattggcg
     2281 cgcggtcgcc ccggtgttag gcagggtgca cgggctggcc cacattaccg gcggtggcat
     2341 tcccggcaac ctggttcggg tcctgccgcc ggattgcgag gcggtggtgg agatgggcgg
     2401 ctggccggtc cctcccatct ttcagttcct ccagcagggc ggcgacgtga gcgatgaaga
     2461 aatgcgcgac gtgttcaatc tcggtatcgg tctgatcgcg gtcgttcccg ccgccgccgc
     2521 cgccgccctt cgcgacgcgg cgacctcggc cggggtcgtg acctgggtca tcggtggtgt
     2581 gcgcgccggg gcaaccggcg taaggttcac tggatgagaa ccacgctccc ggttggtccg
     2641 tccgtccgtc cggccgcccg cccgtcatga ccgaagccga ggcgatgcgg cgggcgctgg
     2701 agctcgcctg gcgcgggtgg ggccgggtgc atcccaatcc gatggtcggc gccgtggtgt
     2761 tgcgcgaggg ccagatcatc ggcgagggct ggcacgccga gttcggcggg gcccatgccg
     2821 aagtggaggc cctcgccaac gtgagcgccg ccgccgccga gggcgccacg ctggtggtca
     2881 ccctcgagcc ctgtcgacac cacggcaaga cgccgtcctg caccgaggcc attttcgacg
     2941 ccgggatcgc ccgggtggtg ttcggggccg atgatccgtc ccccgaagcc aggggcggcg
     3001 cggcccagct ggccgacgtc ggtattcagg tggatcgggt gccggtcgag aaccaggtgc
     3061 ggcggcagaa cgccgccttc tttcacgaac tgcgccatcc cactcggccg ttcgtggcgc
     3121 tcaagctggc caccagcatc gatgcccggc tggccgacta caccggccgc tcgcactggc
     3181 tctcggccaa gaaggcccgc gactgggtgc actggctccg cgccgggttc gacgccatcg
     3241 cggtgggcgg gcgcaccgcg cgggtggaca atccctcctt gacggtgcgc gggccggtca
     3301 gcccgcgggt gccgccccgg cgggtcgtct tcgaccgcca cgcccatctg gccggggcca
     3361 cgacgctgct ggggagcgcc cgggagatcc cggttctgct ggtctgcgaa ggcactccgg
     3421 tccccgacca ggcggccgag tatgcccagg ccggggtgga cattctggag gcgggcaacc
     3481 tcaccctcgc gctccagggc ctgtacgccc gcggcgtcaa atccctgctg gtggaaggcg
     3541 gcggccggct ggccgggcgg ctactcgggg ccgggctgat cgaccgattc tactggctcc
     3601 agaccccgct ctggctgggc gaaggcggcg tcccggcgtt cgccgggctg catggcgagc
     3661 tgttggagca ggtctatcgc tggaccccgg tcgagcgacg ctcgctgggc ccggacacgc
     3721 tgctggtgct cgaccggcag cacagcggtc aataagaggc tcgggagtgc cgggagattc
     3781 ccgcccctcc cggacattcc gctagggttt cctcacccaa tcgagattct cgttctctcc
     3841 cagctgctgg tgccgcagtc tcacatctga cgggtttgcc acgaacacca cgtagatctg
     3901 tcgattgccg ttcggaccgc gggtaaaggc gatcttgctg ccatcgggtg accagaccgg
     3961 atcgccatcg atcgcattgg acgtgagccg cacctgtccc gttccgttgg cgtttatcac
     4021 ccagatctga ctatctcggc taaagacgat tctcgttcca tcgggggacc agccgggttc
     4081 ttcgtcctca ttgctgccgc cggtgagctg ggtgacgccc gagccgtcgg cattcatgac
     4141 ccagatcccg gtagtgccgg atccgtcagc caccgtgaag gcgatcttgg cgccatcggg
     4201 ggagaaggcc aacgccacgt ttcccgagca tgcggcgcgc attgagcagc tggggtcgat
     4261 cgccgaaatc acgggcgagg ttttccgcgg catggagatc acgggcggcg tggggtaacg
     4321 cgccggttcg ccacccgatc gaccccttca ggcgaaaggc ccaagcctcg gcgaaccggt
     4381 tactcgaacg ccgtgcaaac tcaatcgcga gggtgagatc ggccagcgcg ggcccatgat
     4441 cgaagaagct gaaatgatcg tagccgctcc acgccagggt ttccgccaga ccggcgaggt
     4501 cccgcgcctt gcgttgatgc gtctccgcgc tgtccaaggg aggagcgctg acggccgggt
     4561 cgtcgacgtt gatgaaacgg taggatccga gggcctgcca acagagcccc tggagccgca
     4621 ggtcacccac ccgacgggcc agggccaacc cgcggtcggc atccacctgt gcacccggct
     4681 ttcccgccgc caccagcaac ggtgcccggg tacaccgcgg agcgctttcg agctcgcggt
     4741 cgttgggaga gagcagtcgt tccgcccgcc cgagaattct gagcgccgag tcgatgggtg
     4801 ccagggttgc cagcatcagc ctggctgggc ggtcgccagg aagctgcttc agccgggccc
     4861 ccaggcggtc ctgccacacc ggaacgctac cggattccac ggcatcaatc gccgcccgaa
     4921 ctgccgggcg ctgccgggcc ggggggtccg tcgtgccctg gaggacaatc aggaacagag
     4981 cgagcagtgg gacttgggac atagccgtcg gagcgagagg ttagcccctg gctgggacgc
     5041 ccgcaacaac cgggcgcagg gctcgaccgg gtgtgccgga gccgtatctt tccggccatt
     5101 ctggaacagg aaggcgcggg acgaacatgt tcacagggat cgtgacggcg atcggacggg
     5161 taaaatccac gacccggacc cgcgagggaa tgacgctcgc cattgcggtt ccgtggcgtc
     5221 gcctggcact gggggagagc atcgcggtgg acggggtctg tctgacggtg gtgcaaaaag
     5281 ggaagggctg gttcaaggtc caggtggtcg atacctccct cgaccgtacc cgattccggg
     5341 actacggggc cggtgaccgg gtgaacctgg agcgtgccct ccaggtgggc gaccggttgg
     5401 gaggccacct ggtccagggt cacgtcgacg gcattgcccg agtcgcgcgg gtggtgaacc
     5461 gaaaggatgc ccgggtcctc gacttggtcg tgcctgccga agtggcccgg gtctcggtgc
     5521 cgctgggatc gatcacgctc gacggcgtca gcctgaccgt ggttgagaaa ccaggtcgga
     5581 ccacgatacg gatctcgttg atcccgttta ctttacagca cacgaccctg ggccgattgc
     5641 gggccggctc ccgggtccat gtggagggcg acatcattgg gaagtatgtg gaaggactcc
     5701 tgacaccaag agcctcgtga ccagcgatcc caggtacggc accatcgagc aggccatcga
     5761 agacctccgt aacggcaagg tcatcatcgt ggccgacgac cgcgaccgcg agaacgaagg
     5821 cgacttcgtg tgcgcggcac agctggttac acccgaggtc gtgaacttca tggcgcagca
     5881 cgggcggggg ctcatctgtc tggctctgac gccggagcgt tgcgatcaac tggggttgcc
     5941 gcagatgacc gagcagagca ccgaagagct gggcaccgcc ttcaccgtga gcatcgacgc
     6001 cgacaagcgc ttcggggtga gcaccgggat ctcggcggcc gatcgggcac gcaccattca
     6061 gatcgcgctc aaccccgaga cccagaaggc cgacctccgg cgtcccggcc acgtgtttcc
     6121 gttgcgagcc cgcccgggcg gcgtgctgca gcgggtgggc cacaccgagg ccagcgtgga
     6181 tctggcccgg ctggccggcc tgctgccggc cggggtcatc tgcgagatcc tgaaccggga
     6241 cggcaccatg gcgcggcagc
//
LOCUS       DASWKS010000103         9639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_790399, whole genome shotgun sequence.
ACCESSION   DASWKS010000103 DASWKS010000000
VERSION     DASWKS010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790399"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1083)
                     /locus_tag="VGA78_03205"
     CDS             complement(<1..1083)
                     /locus_tag="VGA78_03205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9892900.1"
                     /translation="MPDASVPAVEFHSVSKSYGATRAVDRLSLSIAPGEFFSILGPSG
                     CGKTTTLRLLAGLELPDPGGTILIHGEDVTGRRPYDRRLSMVFQNYALFPHLSVERNV
                     AFGLEQRRVPASAIPARVRQGLELVRLDPATFARRMPSQLSGGQRQRVALARALVLEP
                     AILLLDEPLGAIDLKLRKQMQLELKALNRRLGLTFVYVTHDQEEALTMSDRIAVMEQA
                     RVAQVGTPAQIYEDPRTAFVAGFIGESNFLDGRADGRADGRTVVYRADGSSFLLPDQL
                     EPGRQVRIAIRPEWLDLFPPGQVPPAENAIPGTVREVIYRGETIHVLVDVGEGETMTV
                     ALRNEGQLIKPVSWRRGDRVIVGWLPE"
     gene            1179..2315
                     /locus_tag="VGA78_03210"
     CDS             1179..2315
                     /locus_tag="VGA78_03210"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX9892901.1"
                     /translation="MTRRVGAPVCLAANFPSNMFAPERLARTLAGGGLALLTVLFASQ
                     MYVWINWWPIRIGWPTALVWSLPQVAIWLLLAPAALELSRRVPLERGHRAARLVLHAA
                     ASLGFGLAGLLLLDLSDRLFHWAQLLGAPVLVTRLKYTVIHLHWGTAIYWVLLGADHT
                     MRYYRHVGERDLLAARLESQLSQARLSVLRDQLNPHFLFNTLNSIAVLVRHDPVAAEA
                     MLHRLSDFLRGTLEGGEAPLCSLDEELTRVRTYLGIEECRFQDRLSIRFQIDRDALVA
                     LVPSFILQPLVENALRHGIAPRPGPGLVEVTAQRNGGRLCLAVRDDGAGLPLPPVREG
                     VGLSNTRRRLQALYGSGSRLELRSRVPRGTEVLVELPWQAAEAS"
     gene            2312..3070
                     /locus_tag="VGA78_03215"
     CDS             2312..3070
                     /locus_tag="VGA78_03215"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator
                     DNA-binding domain-containing protein"
                     /protein_id="HEX9892902.1"
                     /translation="MISLLIVDDEPLARAGLRDFLADQRDVEVVGECQDGPEALEAIQ
                     RLHPDVVLLDVQMPGLGGFDVLAALEGELPLVIFVTAWDNYALQAFEVHAVDYLLKPV
                     ERARFHQALDQARRQLHRRETTDAGTRIAALLDALERSGSRRRFLVKSAGRIRLIRAD
                     QVRWIEAAGNYARLHTQDGRHSVRQTMQELEAQLDPSQFLRIHRSYFVNLDAVSEIQH
                     WVKGDLVVLLKGGGSLPLSRAYRSRLEERLGRLG"
     gene            3182..5317
                     /locus_tag="VGA78_03220"
     CDS             3182..5317
                     /locus_tag="VGA78_03220"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9892903.1"
                     /translation="MRCRLFLAGVIALLTPPLAAQSKGSPAPARRDPVVDTLHGVLVA
                     DPYRWLEDPDSPEVTRWIRAQDTWAREWADADPDRDRLRTRVATVAGSRRFGAPVPAG
                     GSYLYFEADASFVRRSLIQDDGAGGRRILIHEDSLPGSGAARLVNFFPSRDGRWLAWG
                     VSQSGSSWITLRVRDLRTGLDLADTLTGMNGGRTSLAWSGDGAGFYYERLPIPAPGTE
                     RSSTLQGERLWFHRVGTSQERDVLVYDPADPDLFLSTSVSGDGRWLVVGVGIGGDPRN
                     RVLLGDLAAGPPALKPLLPEPDASYTFLGSANDTLWFQTTLDAPRSRIIAVNARRPAR
                     AEWRTVVAESEDVIEPTIGAAYVGGRLIVPYRHDAWMRVKVYHGDGRFAYDVRLPKMG
                     SIWTGFSGRPDGSEAFFVLSDFADPGTIYSLDVATGRVRPFRRPDLRHDPDQFVTRQV
                     FYRSQDGTRIPMFVSHRRELRPGPGTPVLMYAYGAFGWSASPWYRPDVAVWMQLGGVF
                     ALPNIRGGGEYGREWHQAGIGRRKQTAIDDVIGAAEWLIAQGWTTRSKLAINAGSASG
                     MVAAAAIVQRPELFAASTIDYPALDMVRFDRFTGGRQWRSDFGSTENPEDFQALLAYS
                     PYHNLRPGTCYPATMVLPGERDEVTVPMHAYKFVAAMQAAQACDQPVLLRVSWGAGHS
                     AGATQEDSIDNWTDQLVFLSRVLQLPRGV"
     gene            5369..5920
                     /locus_tag="VGA78_03225"
     CDS             5369..5920
                     /locus_tag="VGA78_03225"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX9892904.1"
                     /translation="MQRRDLLRALSGAAAVSVLGPMSPEERLGFGRRLHAAVGDGSFS
                     ALDRQQVALVTELSDLIIPRTDSPGASDVRVVEFIDRILAFWDTGPERDRFLAGLDAI
                     QARARAMGAPGFAALQPAQKTELLTGLDSAAALPDGSGEQAWARLKGMVVYGYFTSRE
                     VQEKVLHSVVLPGRFDGCVPIGG"
     gene            5922..7607
                     /locus_tag="VGA78_03230"
     CDS             5922..7607
                     /locus_tag="VGA78_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9892905.1"
                     /translation="MARQDLYDAIVVGSGITGGWAAKELCEAGLRTLVLEAGRPIEPA
                     RDYVEHVQAWEHLYRGWGDRRTLERNQPVQRKCYACDEWASKFFVNDLENPYLTDSGT
                     TFDWIRGRHVGGRSIMWGRQVYRWSDLDFEANAREGIGGDWPIRYRELAPWYDHVERF
                     IGISGQAEGLPQLPDGRFLPPMQMNCAERDVAAAMARTWGRDRVMTIGRCAILTQDHN
                     GRAACHYCGACERGCITHSYFNSIASTLPAAEATGRMTLRPHSVVHSVIYDETRDRAA
                     GVRVIDAVSMQALEFRARVVFLCASALESARILLNSKTPRYPDGVGSSSGELGHNLMD
                     HIFLAGASATIPGHERERTFGNRPNGIYVARFRNVKERHPGFVRGYGCQGGASRSGWD
                     RTLKGFGADFKRALIEEPGPWSFWLGGWGECLPRHDNRVALDPELKDKWGIPALRVHC
                     TWGPNELAMAEDMQVTCAEILEAAGGIGIRTFNDHSTPGLCIHEMGTARMGRDQRTSV
                     LNRWNQVWDAPNLFVTDGACMASSACQNPSITYMALTARACSRAVALLRRHAL"
     gene            7848..8558
                     /locus_tag="VGA78_03235"
     CDS             7848..8558
                     /locus_tag="VGA78_03235"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX9892906.1"
                     /translation="METLCREAKQIGLQSVELLGEHEWPVTKRFGLTCAMATGPTTIA
                     VGLNRPDQHDRIVAEAARLLPLVAAAGLPNMIVFSGNRTGLSDGEGMEHCERGLRRIT
                     PLAEQWGVTVCMELLNSKVDHHDYQCDHTVWGAELVRRVGSPRFKLLYDIYHMQIMEG
                     DVIHTIRTHFNAIAHFHTGGVPGRHELDETQELQYRAIMTAIADLGYTGFVGQEFIPS
                     RGRDPIASLRQGFTVCSI"
     gene            8624..>9639
                     /locus_tag="VGA78_03240"
     CDS             8624..>9639
                     /locus_tag="VGA78_03240"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9892907.1"
                     /translation="MKGRQLTLLAVAETLAMGPWFAASAVLPQLRGEWTLTQSQAAWL
                     TMSVQLGFVVGAFGSAVINLPDRVPVYRLFAVSALLAAGANAAIPLLDTGPNLALVLR
                     FVTGVALAGVYPPAMKLVATWCREDRGFGIGLLVGALTLGSALPHLLNAVPILGSAGM
                     PPWRPVLLVTSAMTVLAAAIAAWFIRPGPYLTGTAPFDWRFVGRALAHRPTRLVNLGY
                     LGHMWELYAMWTWAPVFLLESYRQNGGSPTGGRLAGFAVVAVGALSCVAAGAVADRVG
                     RTTIAAWSMAISGTCALFAGFLFHMPVALTALCLVWGIAVVGDSAQFSAAASELTDPR
                     YVGTA"
BASE COUNT         1473 a         3220 c         3319 g         1627 t
ORIGIN      
        1 ttcggggagc cagccgacga tcacccgatc gccccggcgc caggagaccg gcttgatcaa
       61 ctgcccttcg ttgcgcagcg ccacggtcat cgtctcacct tcgccgacgt ccaccagcac
      121 gtggatggtc tcgccccggt agatcacctc acgcaccgtg cccgggatcg cattctccgc
      181 cggcggcacc tgccctggcg ggaacagatc gagccactcg ggacgaatgg caatccggac
      241 ttgacgcccc ggctccagct ggtcggggag caggaacgat gagccgtccg cgcggtaaac
      301 cacggtccgc ccgtccgccc gcccgtccgc ccgtccgtcg agaaagtttg actcgccgat
      361 gaagcccgcc acgaaagcgg tccgcggatc ctcgtagatc tgggccggcg tccccacctg
      421 ggccacccgg gcctgctcca tcaccgcgat ccggtccgac atggtgagcg cttcttcctg
      481 gtcgtgggtg acatacacga aggtgaggcc cagacggcga ttgagcgcct tgagctcgag
      541 ctgcatctgc ttgcgcagct tgaggtcgat ggcgccgagc ggctcgtcca gcaggagaat
      601 ggcaggctcg agcaccaggg cgcgcgccag ggccacccgc tgccgctgac cgccggacag
      661 ttgcgacggc atccggcggg cgaaggtcgc ggggtcgagc cgcaccagct ccagcccctg
      721 ccgcacccgg gccggaatgg ccgacgccgg gactcggcgc tgctccagcc cgaaggcgac
      781 gttgcgctcc accgagaggt gaggaaagag ggcgtagttc tggaaaacca tggagagccg
      841 gcggtcgtat gggcggcggc cggtgacgtc ttccccgtga atgagaatgg tgccgcccgg
      901 atcgggcagc tcgagaccgg cgagcaaacg gagcgtggtg gtcttgccgc agccggacgg
      961 gcccaggatg gaaaagaact cgccgggcgc gatactgagc gagagccggt cgacagcgcg
     1021 ggtggcgccg taggatttgg atacgctgtg aaactcgacg gcgggaacgg aagcgtcggg
     1081 cacggcagca ttctacaccc ggacgcggcg gcgaggaacg cacccttcgt cccggaggac
     1141 aacgggttcg tcccatggcg ccgcagctgg ccccgagaat gacccgccga gttggcgccc
     1201 cagtctgcct cgcagcaaac ttccccagca acatgttcgc ccccgagcgg ctggcccgca
     1261 ccctggcggg aggcggattg gcactgttga cggtgctctt cgcctcccag atgtatgtct
     1321 ggatcaactg gtggcccatc cggatcggct ggcccaccgc gctggtgtgg tcgctgcccc
     1381 aggtggcaat ctggctgctg ctcgcgcctg ccgccctcga gttgagtcgg cgggtgccgc
     1441 tggagcgggg ccaccgggcg gcccggctgg tacttcatgc ggcggcgagc ctcggattcg
     1501 gactggcagg cctgctgttg ttggacctca gcgatcggct gtttcactgg gcgcagttgt
     1561 taggcgcccc cgtcctggtg acccggctca agtacaccgt catccacctg cactggggaa
     1621 cggcgatcta ctgggtgttg ctcggggcgg atcacaccat gcgctattac cgtcacgtgg
     1681 gcgaacggga cctgctggcg gcccggctcg aatcccagct gtcgcaagcc cgcctctctg
     1741 tgctccgcga ccagttgaac ccgcactttc tcttcaatac cctcaactcc attgcggtgc
     1801 tggttcgcca cgatcccgtg gccgccgaag caatgctgca ccggctcagc gatttcctga
     1861 ggggaacgct ggaaggcggc gaggccccgc tgtgctcact ggacgaagag ctcacgcggg
     1921 tgcgtaccta cctggggatc gaagaatgcc ggttccagga ccggctttcc atccggttcc
     1981 agatcgaccg cgacgcgctc gtcgcgctgg tgccatcgtt catcctgcag ccgctggttg
     2041 aaaacgcctt gcgccacggg atcgcgcccc ggccgggacc gggcctggtg gaggtcacag
     2101 cccagcgcaa cggcggcagg ctctgtctgg cggtacggga cgatggggcg ggactgcccc
     2161 tgcccccggt ccgggaaggc gtcggactgt cgaacacccg ccggagactg caggcgctct
     2221 atggcagcgg gtcgcgactc gagctcagat cccgcgtgcc gcgcggcact gaagtgctgg
     2281 tagagctccc ctggcaggcg gcggaggcgt catgatcagt ctgctgatcg ttgatgacga
     2341 gccgctggcg cgggccggcc tgcgcgactt tctggcggac cagcgcgatg tcgaggtggt
     2401 cggtgagtgt caggacggtc ctgaggccct ggaggccatc cagcggcttc atccggatgt
     2461 ggtcttactc gatgtccaga tgcccggtct cggtggattc gatgtcctgg cggcgctgga
     2521 aggggagctg cctttggtca tttttgtcac cgcctgggac aactacgcct tacaggcgtt
     2581 cgaggtccac gcggtcgact atctgctcaa gccggtcgaa cgagcccgct tccaccaggc
     2641 gttggaccag gcccgccgcc agctgcaccg gcgggaaacc acggacgccg gcacccggat
     2701 tgccgccctg cttgacgcgc tggagcgctc cggatcgcgc cggcgtttcc tggtgaaatc
     2761 cgcgggccgg atccggctga tacgagccga tcaggtgcgc tggatcgaag cagccggaaa
     2821 ctatgcccgg cttcataccc aggacggccg tcacagtgtg cgacagacca tgcaggaact
     2881 cgaggcccag ctcgatccct cgcagttcct gcggatccat cggtcctatt tcgtgaacct
     2941 cgacgcggtc agcgagatcc agcactgggt gaaaggtgat ctggtcgtcc tgctcaaggg
     3001 cggaggttcg ctaccgctgt cgcgggccta ccggagccgg ctcgaggagc gtctgggccg
     3061 actgggctga ccgtccctga ttctcgccgg ttcatcccgc cagctggata cccgccccga
     3121 ccgggttcaa cccctctcgc gattccagta ccctcggtag accaaccaga tcgagggatc
     3181 cgtgcgctgc agactgttcc tggcgggagt gatcgctctg ttaacgccgc cgctggcggc
     3241 ccaatccaaa ggctcgcccg ccccggcgcg gcgtgatccc gtggtggaca cgctgcacgg
     3301 ggttctggtc gccgacccct accgctggct cgaagaccct gattctccgg aggtgacccg
     3361 gtggatccgg gcgcaggaca cctgggcccg ggagtgggcc gacgcggatc cggaccgcga
     3421 tcggcttcgc actcgggtgg ccacagtggc cgggagccgg cgattcggtg cgccggtgcc
     3481 ggcgggcggg agctatttgt acttcgaagc ggatgcgtcg ttcgtccgtc ggagcctgat
     3541 ccaggacgac ggcgccggtg ggagacgaat cctgatccac gaggactccc ttcccggctc
     3601 gggtgccgcg cgcctggtga acttcttccc cagccgggac ggacgctggc tcgcctgggg
     3661 cgtttcgcag agcggctcct cgtggattac cctcagggtt cgcgacctgc gcactggcct
     3721 ggatttggcc gacactctca ccggcatgaa cggcggccgc acctcgctgg cctggtccgg
     3781 cgatggcgcc ggcttctact acgaacgatt gccgataccc gcgccgggga ccgagcggtc
     3841 ctccacgctg cagggcgagc ggctgtggtt ccatcgagtc ggcacgtcgc aggagcggga
     3901 tgtcctggtg tatgacccgg ccgaccccga tctcttcctc agtacgtccg tgagtggaga
     3961 cggccgttgg ctggtggtag gcgtcgggat cggtggcgac cccaggaacc gggtcctgct
     4021 gggcgatctt gccgcgggac cacccgctct caagccgctg ctgcccgagc ccgacgcttc
     4081 gtacaccttc ctcggcagcg ccaacgatac gctctggttc cagaccaccc tcgacgcacc
     4141 ccgttctcgc atcattgcgg tcaatgcccg gcggccggcc cgagccgagt ggcgaacggt
     4201 ggtggccgag tccgaggacg tgatcgaacc gaccatcggg gcggcctatg tcggcgggcg
     4261 tctgatcgtg ccctaccggc acgacgcctg gatgcgggtg aaggtctacc atggcgacgg
     4321 gcgattcgcc tacgacgtgc gcctgcccaa aatgggctcg atctggaccg gcttctcagg
     4381 ccggcccgac gggagcgagg cgttcttcgt gctctccgac ttcgccgatc ccggcaccat
     4441 ctactcgctc gacgtcgcga ccgggcgggt gcgacctttc cggcggccgg acctgaggca
     4501 cgatcccgac cagtttgtca cccggcaggt cttctaccgg agccaggacg gcacccggat
     4561 ccccatgttc gtgagccatc gccgggagtt gcgtcccgga cccggtaccc cggtgctgat
     4621 gtacgcctat ggtgccttcg gatggtccgc gtctccttgg taccgacccg atgtcgcggt
     4681 gtggatgcag ctgggagggg tgttcgccct gcccaatatt cgggggggtg gcgagtacgg
     4741 gcgcgaatgg caccaggccg gcatcgggcg gcgcaagcag accgccatcg acgatgtgat
     4801 cggggcggcc gaatggctga tcgcacaagg gtggaccacc cgctccaagc tggcaatcaa
     4861 cgccggcagc gccagcggga tggtggcggc cgcagccatc gtgcaaaggc cggaactctt
     4921 cgccgccagt accatcgact atcccgcgct cgacatggtg cgattcgacc ggttcaccgg
     4981 cggccggcaa tggcgatcgg atttcggctc caccgagaac cctgaggatt tccaggcgct
     5041 gctggcgtat tccccctacc acaacctccg acccggaacc tgctatcctg ccacgatggt
     5101 actgccgggc gagcgagacg aggtcacggt tcccatgcat gcctacaagt tcgtggccgc
     5161 catgcaggcc gcccaggctt gcgaccagcc cgttctgctc cgggtgtcct ggggtgccgg
     5221 ccactcggcg ggggccacgc aggaggactc aatcgacaac tggacggacc agctggtctt
     5281 cctgagccgg gtgctgcagc tgcctcgagg cgtttgatgc caaccgtgca gggtataggt
     5341 tcccctggtc ccctgccagg acctctcgat gcagcgacgc gatctgctgc gggcgctgag
     5401 cggcgccgcc gccgtctcgg tcctcggccc gatgagtccg gaggaacggc ttggattcgg
     5461 gcggcgcctg cacgccgcgg tgggcgacgg ctccttctcg gccttggacc gccagcaggt
     5521 ggccctggtg accgagctct ccgatctcat tatcccccga accgatagtc ccggcgccag
     5581 cgatgtgcgg gtggtcgaat tcatcgaccg gatcctggcg ttctgggata ccggcccgga
     5641 gcgcgaccgc tttctggctg ggttggacgc gattcaggcg cgggcgcgtg ccatgggagc
     5701 gcccggcttc gctgcgcttc agccggcgca gaaaacggag ttgctgaccg ggctcgattc
     5761 cgccgcggcc ctccccgacg ggagcgggga gcaggcctgg gcccggctca agggcatggt
     5821 ggtctacggc tacttcacct cccgtgaggt gcaggagaag gtgctgcaca gcgtggtcct
     5881 gcccgggcgc ttcgacggct gcgtcccgat cggaggctga catggcgcgc caggacctct
     5941 acgacgccat cgtggtcgga tcgggaatca ccggcggctg ggccgccaag gagctgtgcg
     6001 aagccggatt gcggaccctg gtgctggaag caggacgccc catcgagccg gcccgcgatt
     6061 acgtcgaaca cgtccaggcc tgggagcacc tctaccgcgg ctggggcgac cgccgcacgc
     6121 tcgagcggaa ccagccggtc cagcggaagt gttatgcctg cgatgagtgg gcctcgaagt
     6181 ttttcgtcaa cgatctggaa aacccctacc tcaccgattc gggcacgacc ttcgactgga
     6241 tccggggccg ccacgtcggc ggccgttcga tcatgtgggg ccgccaggta taccgctgga
     6301 gcgatctcga tttcgaggcc aacgcgcggg agggcatcgg gggcgattgg cccatccggt
     6361 atcgcgagct ggcgccgtgg tacgatcacg tggagcggtt catcggtatc agcggccagg
     6421 cggaggggct gcctcagctt cccgacggcc ggtttctgcc gccgatgcag atgaattgcg
     6481 ccgagcggga cgtcgcggcc gccatggcgc gaacctgggg ccgcgaccgg gtcatgacca
     6541 tcggccggtg cgccattctc acccaggacc acaacgggcg ggcggcctgt cactactgtg
     6601 gcgcctgcga acggggctgc atcacccact cctatttcaa cagcatcgcc agcaccttgc
     6661 cggccgccga ggcgacgggc cggatgacgc tccggcctca cagcgtggtt cacagcgtca
     6721 tctacgacga gacccgggat cgggcggcgg gagtgcgggt gatcgacgcg gtgagcatgc
     6781 aggcgctcga gttccgggcc cgcgtcgtgt ttctctgcgc ctcggcgctc gaatcggccc
     6841 gcatcctgct caactcgaag accccgcgct accctgacgg cgtgggcagc agcagcggag
     6901 agctgggcca caatctgatg gatcacattt tcctggccgg ggcctcggcc accattcccg
     6961 gccacgagcg ggagcggacc ttcggcaacc ggcccaacgg gatctacgtc gcccggttcc
     7021 gcaacgtgaa ggagcgacat cccggcttcg ttcgcggcta cggctgtcag gggggcgcaa
     7081 gccgttcggg atgggaccgg accctgaagg ggttcggcgc cgacttcaag cgggccctca
     7141 tcgaagaacc ggggccctgg agtttctggc tgggcggatg gggcgaatgc ctgccgcggc
     7201 acgacaaccg ggtggcgctc gacccggagc tcaaggacaa gtggggcatc cccgcgctcc
     7261 gggtgcactg cacctgggga cccaacgagc tggccatggc ggaggatatg caggtgacct
     7321 gcgccgaaat cctggaggcg gccggcggca tcggcatacg aaccttcaac gaccactcca
     7381 cgccggggct ttgcatccac gagatgggca ccgcccggat gggtcgcgac cagaggacgt
     7441 cggtcttgaa tcgatggaat caggtgtggg acgcgccgaa cctgttcgtg accgatggag
     7501 cctgcatggc cagctcggcc tgccagaatc ccagcatcac ctacatggcg ctgactgccc
     7561 gggcctgctc ccgcgccgtc gcgctgctcc ggcggcacgc gttatagcaa tcgggatggg
     7621 gccggtatgt ttggaaagca gcgtcgaagg ggtcgaagag gtcgaagagg tcgaaggccg
     7681 tcgaagtcgg tcgaagggat cctatgaatc gaagacatgc gattgccacc atggtggccg
     7741 cgggggcggc ggctactcaa tcagcgtcag cgaccgcccg cccgcccgcc ccaccggctg
     7801 cccgcctgaa acagtcggtc tgccgctggc cttatgaggg agtcccgttg gaaaccctct
     7861 gtcgcgaggc aaagcagatc ggcctccaat cggtggagct gctgggagaa cacgagtggc
     7921 cggtcaccaa gcggttcggg ctgacctgcg cgatggccac cggacccacc accatcgcgg
     7981 tggggctcaa ccgtcccgat cagcatgacc gaatcgtggc cgaggcggcc cggctcctgc
     8041 cgctggtggc ggcggccggc cttcccaaca tgatcgtctt ctccggcaac cggaccgggc
     8101 tgtcggatgg ggaaggcatg gagcattgcg agcggggact gcgccggatc acgccgttgg
     8161 cggagcaatg gggcgtcacc gtgtgcatgg agctgctcaa cagcaaggtg gatcaccacg
     8221 actaccagtg cgatcacacg gtctggggtg ccgagctggt cagacgagta ggttcgcccc
     8281 gcttcaagct gctgtatgac atctaccaca tgcagatcat ggagggtgat gtcatccaca
     8341 ccatccggac ccatttcaac gccatcgccc actttcacac cggcggggtg ccggggcggc
     8401 acgagctgga cgagacccag gagttgcaat accgcgccat catgaccgcg atcgcggatc
     8461 tgggctacac cgggtttgtg ggtcaggagt tcattccctc ccgcgggcga gatccgatcg
     8521 cctcgctgcg acaggggttc accgtctgca gcatctaggt ccgggtcgcg agtcgcgcgt
     8581 ccgtgcaccc tcggcctgac gttttcggcg ggggctgctc cgcgtgaaag ggagacaact
     8641 caccctgctg gcggtggcgg agaccctggc gatgggcccg tggttcgccg cctcggccgt
     8701 gctgccgcag ctccggggcg agtggaccct cacccagtcc caggccgcgt ggctcaccat
     8761 gtcggtccag ctcggcttcg tggtgggtgc cttcggcagc gcggtgatca atctgcccga
     8821 ccgggtgccg gtctaccgtc tgttcgccgt aagcgccctg ctggcggccg gagccaacgc
     8881 ggccattccg ctgctcgaca ccggcccgaa cctggccctg gtgctccgat tcgtgaccgg
     8941 cgtggcgctg gcgggggtgt atccgccggc catgaagctg gtggcgacct ggtgccggga
     9001 agaccgcggc ttcggaatcg gtctgctggt cggggcgctc acgctgggct cggcgttgcc
     9061 ccatctgctc aacgcggtcc ccatcttggg ctccgccgga atgccgccct ggcggccggt
     9121 gctgctggtg acgtccgcca tgaccgtgct cgccgcggcc atcgccgcct ggttcatccg
     9181 ccccggtccc tacctgacgg gaaccgcgcc gttcgattgg cgcttcgtgg gccgggcgct
     9241 ggcccaccgg ccgacccggc tggtgaacct gggttatctg ggacacatgt gggagctcta
     9301 cgccatgtgg acctgggcgc cggtctttct gctggagagc taccgccaga acggcgggtc
     9361 tcctaccggg gggcgcctgg ccgggttcgc ggtggtggca gtcggcgccc tcagctgtgt
     9421 cgccgccggc gcggtggcgg accgggtggg gcggaccacg atcgcggcct ggagcatggc
     9481 gatttcggga acctgcgcgc tgttcgccgg attcctgttt cacatgccgg tagccctgac
     9541 cgcgctctgt ctggtgtggg gcattgcggt ggtgggcgac agcgcccaat tcagcgccgc
     9601 cgcttccgag ctgaccgacc cgcgctatgt cggcacggc
//
LOCUS       DASWKS010000104         8070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_790811, whole genome shotgun sequence.
ACCESSION   DASWKS010000104 DASWKS010000000
VERSION     DASWKS010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790811"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /gene="rsmA"
                     /locus_tag="VGA78_03245"
     CDS             complement(<1..724)
                     /gene="rsmA"
                     /locus_tag="VGA78_03245"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEX9892908.1"
                     /translation="MARPRRRFGQHFLTNTRILDRIAETLDPAPGDRVLEIGPGHGAL
                     TRALLARLAVITVIEIDRDLVPALRTRFPGIRVIEGDALELDWHQLIDTGCPSEPRPW
                     HVTGNIPYNITSPLLDKALSPPRPQRIVFLVQKEVADRVTARPGSREYGSLTVGVQAV
                     ASAERLFTVPAGAFHPPPRVDSAVILITPLERPLVPDESIRTFRRMVTGLFGFRRKQL
                     GRGIRQLTGWPADRVVELLAQQA"
     gene            complement(727..2223)
                     /locus_tag="VGA78_03250"
     CDS             complement(727..2223)
                     /locus_tag="VGA78_03250"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HEX9892909.1"
                     /translation="MRLACGDDPGYPVERPKAEGLVATPAGTSWFTPVPETEGLWLEI
                     HGDGARPTGMPRAALAAPLIEMLLSSERDAARLWDELTVRYAEIDLLYAISEILGQTV
                     RLEEAARTILRQVARVVGARRASIMVFDEPANLLRVVASQGFDKGHAPALSPDDPQSI
                     AARVFRDQRVIGGDATQVAGRRGAGRHPVYKGNAFLSVPICYAAPGSPARPIGVINLT
                     DSLDGDRFTPRDRKLVTAVANQIGAAIENARLAAREREQQRLEDELQLAHDLQLKLMP
                     EPHVLKGEAQVAVRCVPVASVGGDFYTFLRQGEGRLGVMLGDVSSHGMSAALVMALVL
                     SAAGIHTAAAAGPAETLHRLRESLLAKLSEVEMFATAFYGVLDRNARTLFYANAGHPH
                     AFRITEAGKAERLEATAMPLGLGTWGPIAQATFSWDVEHDLLCLFTDGLADAANADGN
                     RFGEARILERITALRDRPPEEIVDAVMTEVDRHSASPADDRTLLVLRF"
     gene            complement(2304..2768)
                     /locus_tag="VGA78_03255"
     CDS             complement(2304..2768)
                     /locus_tag="VGA78_03255"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9892910.1"
                     /translation="MADPGALALERLPGRPGDGLEAALALRLPSEVGLVDTVVELFAR
                     HCFDGRQSSRHSLFRLRVSLAEALANAIQCGNDCDPAKIVQVQAELFVDHIRLRVSDE
                     GPGFDPSLVPDPRDPEMLESPCGRGLFIIRHLAERVEFNEKGNTIWMTLPRR"
     gene            complement(2777..3109)
                     /locus_tag="VGA78_03260"
     CDS             complement(2777..3109)
                     /locus_tag="VGA78_03260"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX9892911.1"
                     /translation="MGLTTTARGEVAVIRVDGQLTVGNRQELKVTVQAGVDAGGRKFL
                     LDCSSTGYIDSSGLGALVTIAKRVREAGGQIRLAGLNDDLRSLFELTKLDTLFAIYPG
                     VEEALQGY"
     gene            complement(3196..4143)
                     /locus_tag="VGA78_03265"
     CDS             complement(3196..4143)
                     /locus_tag="VGA78_03265"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEX9892912.1"
                     /translation="MSFRATLRARARQVNARIVLAEGSDPRVQSAADTLRNEGIAEPV
                     LLGGPGIDPLGDPRLPAVAELLRTLRPDRINDAIHALDLAADPVRFAAGLVALGQADG
                     AVAGAVHTTADVIRAALWAIGITAEATLLSSAFYMALPDGQVLTFTDCAVVAEPDADQ
                     LAHIALAAARDRRRLIGDEPRVAFLSHSTRGSAAGPRVDRMAKALARFRELAPEVAAD
                     GELQGDAALVPEIAERKAPGSPLAGQANILVFPDLDAGNIAYKLVQRLAGAAAIGPLF
                     QGLARPMSDLSRGAAADDIVDVAAMVALQTREQGPGSRE"
     gene            complement(4140..4622)
                     /gene="coaD"
                     /locus_tag="VGA78_03270"
     CDS             complement(4140..4622)
                     /gene="coaD"
                     /locus_tag="VGA78_03270"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEX9892913.1"
                     /translation="MTRIAIYPGSFDPPTRGHEDLLRRSLTLADEVHLAVAVNPAKQP
                     LFDVKERLELLHALFGPVDRVKVVSFEGLLAGYARVVGATLVVRGLRAAGDFEYELQM
                     ALMNRQLNPALETVFLAPASNLGFVSSTLVREVARYGGELGALVHPIVAEALRKKFRA
                     "
     gene            complement(4619..5137)
                     /locus_tag="VGA78_03275"
     CDS             complement(4619..5137)
                     /locus_tag="VGA78_03275"
                     /inference="COORDINATES: protein motif:HMM:NF015559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HEX9892914.1"
                     /translation="MTRIIAGEFGGRRLAVPRGRTTRPTADRVREAWMSILAPRLPGA
                     RVLDLFAGTGALGLETLSRGAAAADFVEQAPAVLTLLRRNIAELGVAERARVIRADGL
                     HFATGLAPGAYQVALADPPYGGDYAERLAAAFRLVPFADLLALEHESGFDLAADDVRR
                     YGDTAISFFHAP"
     gene            complement(5144..6901)
                     /gene="recJ"
                     /locus_tag="VGA78_03280"
     CDS             complement(5144..6901)
                     /gene="recJ"
                     /locus_tag="VGA78_03280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEX9892915.1"
                     /translation="MIRWIVEAPADAGLAQTLVSALNIPPALARLLVQRGYDEPESAK
                     AFLRPSLDALSDPYSLAGMADAVAAVAGAVARGETILVHGDYDVDGQSATALLTRALR
                     AAGARVEPFVPHRLRDGYDFGPAGLAEAQRVGARLIITCDCGITAVETVRLAAEAGIA
                     VVVTDHHLPGPELPPAVAVVDPQRQDDVSGLGALCGTGIAFKLAQALVPALGLPVTLP
                     LHLLDYAAIATVADVVPLVGENRIIVRHGLRLLRQSRWPGLQALLRTAGLANRSVRAG
                     QIAFIIGPRLNAAGRVGEASAGLRLLLTDDHAEAVRLAEQLEVWNTERQAIDQRILQD
                     AIDLVEHDFDLERDSAFVLAAEGWHPGVVGIVASRVVERYGRPTFLIGFDGEIGKGSG
                     RSISRFNLHDALLECADLLDRFGGHRMAAGLTVRRDRLEEFRARFGAVARRLLDPGTL
                     GPEQRVDIELDLAEVTGDLERLCRHLEPCGMGNPSPVFGVREVRFANREVVGQGHLKG
                     ILRRGESGLDTIGFQWADRVPWLCDDPVDAAVKLERNDYMGRSTLQARLVALTPTGFS
                     REQGAGSREQGSVILTADD"
     gene            complement(6898..7617)
                     /locus_tag="VGA78_03285"
     CDS             complement(6898..7617)
                     /locus_tag="VGA78_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892916.1"
                     /translation="MHPDLEKLLDLQERDERLLDVDLRLKDLLDEVTALDAALARGRS
                     EVEETRKAHQNGAKRRDELEAKVDGLRVLQDRRRQRLDLAKTNRELQALTSELELARS
                     ILTKEEAEWFRAMEGAAELEGRVTAAEARVAELEAAQGTAREELAGRIAAIEAERQAA
                     AAERLVVAQGLSRPLLMRYDRLRSAHKATPVVVPLHGNACGACFTAVPMSRRSHIRAG
                     LLLDGCEACGVILYAAETINT"
     gene            complement(7638..>8070)
                     /locus_tag="VGA78_03290"
     CDS             complement(7638..>8070)
                     /locus_tag="VGA78_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892917.1"
                     /translation="RYGAKMEESLLRVLLASPSWRTRAAGEFTSGDFELAGFRAVFEA
                     LAALPENADASDALPHLPEEFAGVFERLRESAATRPGLDLDREYEGAAEKLRDRAEFR
                     RVFRIQDPAERRRIMMAWSPERKQRWMWLRADLSARRSRRQ"
BASE COUNT         1300 a         2828 c         2755 g         1187 t
ORIGIN      
        1 gggcttgttg ggccagcagc tcaaccaccc ggtcggccgg ccagccggtc agctgccgga
       61 tcccccgacc caactgcttc cggcgaaatc caaacaggcc cgtgaccatg cggcggaagg
      121 tcctgatcga ctcatcgggc acgaggggcc gttccagcgg agtaatgaga atgaccgccg
      181 aatcaacccg tggcggcggg tgaaaggcgc ccgcgggcac ggtgaacaat cgctcggcgc
      241 tggcgacggc ctgaacgccc acggtcagcg agccgtactc cctgctaccc ggccgggcgg
      301 tgacccggtc ggccacttcc ttctgcacca ggaacacgat ccgctgcggc cggggcggac
      361 tgagggcctt gtcgagcagg ggagacgtga tgttgtaagg gatgttgccg gtcacgtgcc
      421 agggacgagg ctcgcttggg caaccggtat cgatgagttg atgccaatcc agctcgagcg
      481 catcgccctc gatgacccgg atcccgggga atcgggtccg cagcgccggg accaggtcac
      541 gatcgatctc gatgacggtg atcacagcca gtcgcgccag cagggcgcgg gtcagggctc
      601 cgtgaccggg cccgatttcg agcacccgat cccccggggc cggatcgagc gtctcggcga
      661 tgcgatcgag aatgcgggtg ttggtgagga aatgctggcc gaaccggcgc cgcggccgcg
      721 ccacggctag aagcggagca ccagcagcgt gcggtcgtcg gccggtgatg cggagtgccg
      781 gtccacctcc gtcatcaccg cgtcgacgat ctcttcgggg ggacgatcgc gaagcgcggt
      841 gatccgctcc aggatccgcg cctcaccgaa gcggttgccg tccgcgttgg ctgcgtccgc
      901 cagcccgtcg gtaaaaaggc agagcagatc gtgctctaca tcccagctga aggtcgcctg
      961 ggcgatggga ccccaggtgc cgagaccgag cggcatcgcg gtggcctcga gtcgctcggc
     1021 cttcccggcc tccgtgatcc ggaaggcgtg gggatgcccg gcgttggcat agaagagagt
     1081 cctggcgttg cggtcgagca ctccgtagaa ggcggtcgcg aacatctcca cttcggagag
     1141 cttggccagc agactttcgc gcaggcgatg cagcgtctcg gccggccccg ccgccgcggc
     1201 ggtatgaatg ccggccgcgg acagcaccag tgccatcacc aatgccgccg acattccgtg
     1261 ggaggacacg tcacccagca tcacgccgag ccggccttcg ccctggcgca ggaaggtgta
     1321 gaagtcaccg cccaccgacg cgaccgggac gcagcggacc gccacctggg cttcgccttt
     1381 gaggacgtgg ggctccggca tcagcttgag ctggagatcg tgggccagtt gcagctcgtc
     1441 ttccaggcgc tgctgctccc gctcccgcgc ggccaggcgg gcgttctcga tagcggcgcc
     1501 gatctggttg gcgacggcag tcaccagctt tcgatcgcgg ggggtgaacc ggtcgccgtc
     1561 caacgaatcg gtgaggttga tgaccccgat aggacgagcc ggggagcccg gcgccgcata
     1621 acagatcggg acgctcagga aggcattgcc cttgtaaacc ggatggcggc cggcgccgcg
     1681 ccgccccgcc acctgggtcg cgtcgcctcc gatgactcgc tgatcgcgga agacccgggc
     1741 cgcgatcgac tgggggtcgt cgggtgaaag cgccggcgcg tggcctttgt cgaaaccctg
     1801 actggcgacc acccggagca gattggcggg ttcatcgaac accatgatgg aggcccggcg
     1861 ggcgcccact acgcgagcca cctggcggag aatggtgcgg gccgcctcct ccagccgcac
     1921 cgtctggccc aggatctcgc tgatggcata gagcagatcg atctcggcgt agcgaacggt
     1981 caactcatcc cacaggcggg ccgcatcgcg ctcggaggag agcagcatct cgatgagggg
     2041 cgctgccagc gcggcccgcg gcatcccggt gggtcgggcc ccgtcgccgt gaatctcgag
     2101 ccagagcccc tcggtctccg gcaccggggt gaaccagctg gtgccggccg gagtggccac
     2161 caggccttcg gccttggggc gctcgactgg ataccctgga tcgtcgccgc aggccagtcg
     2221 caaatgctgg tcgtccgcct gccagaggcg gagttgtgag cgggtgatgt tgccgaggag
     2281 ctccaggacg ggcgccagcc gccttaccga cgtggcagag tcatccagat ggtgttcccc
     2341 ttctcgttga actcgacgcg ttccgccaga tggcggatga tgaacagacc gcgtccgcac
     2401 gggctctcca gcatctccgg atcgcgggga tccggcacca gggaaggatc gaaaccgggc
     2461 ccctcatccg acactcgcag gcgtatatga tcgacgaaca gctcggcctg gacctgcacg
     2521 atcttggcag gatcgcagtc gttgccgcac tggatggcgt tcgcaagggc ctcggcgagc
     2581 gacacccgga gccggaacag ggaatggcgg ctgctctgac ggccgtcgaa gcaatggcgg
     2641 gcgaagagct cgacgacggt gtcgaccagg cctacttcgc tgggaaggcg cagcgccagc
     2701 gccgcttcca gtccgtcacc gggacggccc ggaagacgct cgagggccaa ggcgccgggg
     2761 tcggccatcg ccccgctcag tagccctgga gggcttcctc gacgccgggg tagatggcga
     2821 agagtgtgtc gagcttggtc agctcaaaca gcgagcgcag atcgtcattg agccccgcca
     2881 agcgaatctg gcctccggct tcgcggaccc gcttggcgat ggtgaccagc gcgcccagcc
     2941 ccgaggagtc gatatatccg gtggaagagc aatcgagcag aaacttacgg ccgccggcgt
     3001 cgacgccggc ctgcaccgtc accttgagct cctgccggtt gccgaccgtg agttggccat
     3061 ccacccggat gactgcgacc tctccccgcg ccgtcgtcgt gagacccatg cgtcccccgg
     3121 attcggagga agcaggaagc aggaagcagg gagcaggaag cagggagcag gacgtagctc
     3181 cctggggtcc cgtcatcact ccctgcttcc cggtccctgt tccctggttt gtagtgccac
     3241 catggcggcg acgtccacaa tatcgtcggc ggcagcccct cgcgacaggt cggacatggg
     3301 ccgggccagc ccctggaaca agggaccgat ggccgctgcg cccgccaacc gctggaccag
     3361 cttgtacgcg atgttgccgg catcgaggtc gggaaacacc aggatgttgg cctgcccagc
     3421 caggggcgag ccgggcgcct tgcgctccgc gatctcgggc accagcgccg catcgccctg
     3481 cagctcgccg tcggcggcca cctccggcgc cagctcgcgg aaccgggcta gcgccttggc
     3541 catgcgatcc acccggggcc cagcggcgct gccccgagtg ctgtgcgaga gaaaagccac
     3601 ccgtggctcg tcaccgatca gccggcggcg gtcccgggcg gcggcgagcg caatgtgggc
     3661 gagctggtcg gcatcgggct cggccaccac ggcgcaatcg gtgaaggtga gcacctggcc
     3721 gtcgggcagc gccatgtaga acgcggagct gagcagcgtg gcctcggccg tgatcccgat
     3781 ggcccagagc gccgcccgga tcacgtccgc ggtggtgtgc accgctccgg ccaccgcgcc
     3841 atcggcctgt cccagggcga ccagtcccgc ggcgaaccgc accggatccg ccgccaggtc
     3901 cagcgcgtga atcgcatcgt tgatccggtc gggccgcagg gtccgcagca gttccgccac
     3961 ggccgggagc cgcggatcgc cgagcgggtc gatgcccggg ccccccagga ggaccggttc
     4021 tgcgatgcct tcgttccgga gcgtgtcggc ggccgactgg actctcgggt cggatccttc
     4081 ggccaggacg atgcgggcgt tgacttgccg ggcccgcgcg cgcagcgtcg cccgaaagct
     4141 cacgcccgga acttctttcg cagcgcctcg gccacgatgg gatgcaccag ggcgcccagc
     4201 tccccgccat agcgggccac ctcgcgcacc agagtggagc tcacgaaccc gagattggag
     4261 gcgggagcca ggaacaccgt ctccagcgcc gggttgagct gccggttcat cagcgccatc
     4321 tgcagctcgt actcgaaatc acccgcggcc cgcagccccc gcaccaccag ggtagcaccc
     4381 acaacgcggg cgtaacccgc cagcaatccc tcgaaggaaa cgaccttcac ccggtccacc
     4441 gggccgaaga gggcgtgcag cagctcgagc cgctccttca cgtcgaacag gggctgcttg
     4501 gccgggttca ccgccaccgc gagatggact tcgtcggcca gcgtgagcga gcggcgcagc
     4561 agatcctcgt ggccgcgggt cggcggatcg aacgagccgg ggtagatggc gatgcgggtc
     4621 atggggcgtg gaagaaggag atagcggtgt cgccgtagcg tcgcacatca tcggcggcga
     4681 gatcgaagcc cgactcgtgc tccagtgcca acaggtccgc aaagggcacc agccggaagg
     4741 ccgcggccag gcgctcggca taatcccccc catagggtgg gtccgcaagc gccacctggt
     4801 acgctcccgg cgccagcccc gtggcgaagt gcaggccgtc ggcccggatc acgcgagccc
     4861 gctccgccac tcccagctcc gcgatgttcc ggcgaagcag ggtgaggacc gccggcgctt
     4921 gctcgacgaa atcggccgcg gcggctccgc gcgacagggt ctcgagtccc agcgccccgg
     4981 tgccagcgaa caggtcgagc acccgcgcgc ccggcaatct gggcgccaga atactcatcc
     5041 aggcttcccg cacccgatcg gcggtggggc gggtggttcg tccgcgcggc accgccagcc
     5101 gcctgccccc gaactcgccg gcgatgatgc gagtcatccg ttgtcaatca tcagccgtca
     5161 gaatgaccga gccctgctcc ctgctgcctg ctccctgctc cctgctgaaa ccagtcggcg
     5221 tgagcgcgac gagcctggct tgaagcgtac tgcggcccat gtagtcgttg cgttccagct
     5281 tgaccgcggc gtcgaccgga tcgtcacaca accaggggac ccggtcagcc cactgaaagc
     5341 cgattgtgtc gagtccggac tcgccccggc gaaggatgcc cttgagatgc ccctgcccca
     5401 ccacctcccg attggcgaac cggacttcgc gcaccccgaa cacgggtgac gggttgccca
     5461 tgccgcaggg ctcgagatgg cggcagagtc gctcgagatc gccggtgact tccgccaggt
     5521 cgagctcgat atccacccgc tgctccggcc ccagcgtacc gggatcgagc aggcgccgag
     5581 ccacggcccc gaaccgagcc cggaactctt cgagccggtc ccgtcgcacg gttagcccgg
     5641 cggccatccg gtgcccgccg aaccgatcca acagatcggc gcactccagc agcgcgtcgt
     5701 gcaggttgaa gcgggagatg ctccttcccg accccttgcc gatttcaccg tcgaagccga
     5761 tcaggaaggt gggccggccg taccgctcca ccacccgcga cgccacgatc ccgaccacac
     5821 cggggtgcca cccctcggcg gccagcacaa aggccgagtc gcgctccagg tcgaagtcgt
     5881 gttccaccag gtcgatggcg tcctgcagaa tccgctgatc gatggcctgt cgctcggtgt
     5941 tccagacttc gagctgctcc gccagccgca ctgcctcggc gtgatcgtcg gtcagcagca
     6001 ggcgcagacc ggcgctggcc tcgcccaccc gtcccgccgc gttcaaacgg ggtccgatga
     6061 tgaacgcgat ctgtccggca cgcaccgagc ggttggcgag ccccgcggtc cggagcagcg
     6121 cctgcaatcc cggccaccgg ctctggcgca acaggcgcag cccatgccgg acgatgatcc
     6181 ggttctcccc caccagcggc accacgtccg ccacggtggc aatggcggcg tagtccagca
     6241 gatggagcgg cagcgtgacc ggcagaccca gcgcgggtac cagtgcctgc gccagcttga
     6301 aggcgatgcc ggtgccgcac agcgcaccca gtcccgagac gtcgtcctgc cgctggggat
     6361 cgaccacggc caccgcgggg ggcaattccg ggccggggag atggtgatcg gtgaccacca
     6421 cggcaatgcc ggcctcggcc gccaggcgaa ccgtctccac cgcggtgatg ccgcagtcgc
     6481 aggtgatgat cagccgagcc ccgacccgtt gggcctcggc cagtccggcg gggccgaagt
     6541 cgtaaccgtc acgcagccgg tgggggacga agggttcgac ccgggccccg gccgcgcgca
     6601 gcgcccgggt gagcagcgca gtggcgctct ggccgtcgac atcgtaatcg ccgtgaacca
     6661 ggatggtctc gcctcgggcg accgcgccgg ccacggcggc gaccgcgtcg gccatgcccg
     6721 ccagcgagta gggatcggag agggcgtcga gcgaagggcg gagaaaggcc ttggcgcttt
     6781 cgggctcgtc gtacccgcgc tgcaccagca gccgcgccag cgccggcggg atgttgagcg
     6841 ccgagaccag ggtctgagcc aggccggcgt cggccggcgc ctcgacgatc cagcgaatca
     6901 cgtgttgatc gtctcggcgg cgtacaggat cacaccgcag gcttcgcatc catccagcag
     6961 caggccggcg cgaatgtggc tccggcggct cattggtacc gcggtgaagc aggcaccgca
     7021 ggcgttgccg tgcaacggaa cgactacggg agtcgccttg tgggccgagc gcagccggtc
     7081 gtatcgcatg agcagcggac ggctcagccc ctgagccacg accaggcgtt cagcggcggc
     7141 tgcctgacgc tcggcttcga tcgcggcgat ccggccggcc agctcctctc tcgcggttcc
     7201 ctgcgccgcc tcgagctcgg ccacccgggc ctccgccgcc gtcactctgc cttccagttc
     7261 cgccgcgcct tccatcgcgc ggaaccattc ggcttcctcc ttggtgagga tgctccgcgc
     7321 cagctccagc tcgctggtga gggcttgcag ctcccggttg gtcttggcga gatccagccg
     7381 ctggcggcgc cggtcctgca gcacccgaag gccgtccacc ttggcctcga gctcatcgcg
     7441 ccgcttggct ccgttctgat gggccttccg ggtctcctcc acctcggacc ggcctcgcgc
     7501 cagggccgcg tcgagcgcgg tgacctcgtc gagcagatcc ttgaggcgca gatccacgtc
     7561 caacaggcgt tcgtctctct cttgcaggtc gagcagtttt tcgagatctg gatgcatgca
     7621 ggtttccccg tactggttta ctggcgacgt gagcggcggg ccgagaggtc ggcccggagc
     7681 cacatccacc gctgttttcg ctccggcgac cacgccatca ttatgcgtcg gcgctccgcc
     7741 ggatcctgta tccgaaatac gcgacggaac tccgcacgat cgcggagctt ttccgccgcg
     7801 ccttcatact cccggtcgag atcgagcccg ggccgggtcg ccgcgctctc gcgcagccgt
     7861 tcgaagaccc cggcgaattc ctcgggcagg tggggcagcg catcggaggc gtcggcgttc
     7921 tcgggaagtg cggccagcgc ttcgaagacc gcccggaacc cggccagctc gaagtcccca
     7981 ctggtgaatt caccggcggc ccgggtgcgc caggaagggg aagcgagcag gacccgaagg
     8041 agggactcct ccatcttggc gccgtagcgc
//
LOCUS       DASWKS010000105         8016 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1523182, whole genome shotgun sequence.
ACCESSION   DASWKS010000105 DASWKS010000000
VERSION     DASWKS010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8016
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1523182"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1114
                     /locus_tag="VGA78_03295"
     CDS             <1..1114
                     /locus_tag="VGA78_03295"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9892918.1"
                     /translation="PTSSPSPDFFGGRRPGDNRWGNSVVALKGSTGEVVWGFQTVHHD
                     LWDYDNAAQPVLVTVRQNGRERAAVAQPTKTGSLFLLDRSTGELLFPVEERPVPPSRV
                     PGESAWPTQPFPTLPRPLMPQGRLRPEDAFGFTPVEREECRALLTRYRSEGIYTPPDT
                     LGTLMYPGNASGTNWGSAAWDPERQLLVLNTARLVTLVQLIPQDSLAASRAALGEYEH
                     GSMRGVPFAMRRKTVESSTGIPCNPPPWGTLAAVHLPTGQVKWEVPLGLVPDWVPQAG
                     DSIGKTMGVPNTGGPLVTAGGLVFIGATVDGMFRAFDTDTGRELWSAKLPRGGMATPM
                     SYTVNGKQYVVIAAGGHGKMDLPTGIGDWLVAFVLK"
     gene            1139..2371
                     /locus_tag="VGA78_03300"
     CDS             1139..2371
                     /locus_tag="VGA78_03300"
                     /inference="COORDINATES: protein motif:HMM:NF012470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEX9892919.1"
                     /translation="MKRVTMLVTLLLGAGGPAEGQPAPRRVILFIGDGVGTAYWSAAR
                     LATDSLAVERLRIMGLVDNRSSDNLVTDSGAGATVYATGIRTFNGAIGVGPDSMPLRT
                     VLEAARDRGWATGLVATSTLTHATPASFAAHVPSRASEFEIARQMVDARVDVMLGGGR
                     RYFDGRTRPDSVDLLATLRRQYTVVETAEAFRALDLRRTRRLVGLFAPSQMPAAATRV
                     PSLPDMTRAALAVLGQDPDGFFLMVEGSQPDWRGHANQPLDQVTAEMLDFDGAIRVAV
                     EHQRGHPETLIVVVADHETGGLSLELTRDSLAFEAAAQNLVSGMEPLAAVRALLSSEQ
                     QDEIARLSRELGATASRMRIEASRRGASSSLVARYTSPNHTAEMTPLFASGPGAERFG
                     GIIDNWRVGRLLLEIVER"
     gene            2506..3438
                     /locus_tag="VGA78_03305"
     CDS             2506..3438
                     /locus_tag="VGA78_03305"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9892920.1"
                     /translation="MRHFRWGLSAGLLVLPSVMEGQEAERRLAFRPPGMESVTRQANL
                     AYKAVPATAENRDYGDSLRYDVYRPPGSTRLPAIVFIHGGIIPGDTAALPASALPKEW
                     DSYLEWGRAAAAAGFAAITFNHRLTVRDQVIPVTEDVRDLMRTVRARADRHGIDPSRI
                     CVAVFSAGGPLANLFLRPDGEPVRCLILYYPFMDLAHLGVHTPFRGPHARAALDSAAA
                     WDPSRYLMTRPDSLPPLLLARAGRDAIPGINASIDRFLQLALLRNVQIDLYTHPTGAH
                     GFDRVAGADARAAEIVEATLAFARRYTSERARRQ"
     gene            complement(3552..6197)
                     /locus_tag="VGA78_03310"
     CDS             complement(3552..6197)
                     /locus_tag="VGA78_03310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9892921.1"
                     /translation="MRRLLFGKQLRRLGWKPGVQAEVEDELSHHLELMISEAMQRGLS
                     REEAEAQARLRFGADAAVRAACEELARSRDRSGDRLALLADLRDDLRWAVRSLRRSPA
                     YTLSSGLTLALVVAANALVFTLAYGILFRPLPYPDSGRLVALNERIRAGDVWEVSVPN
                     LEALQSQSRSFAGLAGWYGSEATLVSEDTPRVSLGLVTAEFFPTLGTPAAMGRTLTAA
                     DQQSAEGRPVVLSHAAWQTHFGGDLAILGRAITLNTEQLTVVGVMPASFRFPTPDVAA
                     WAPWGPIQPWMRNRSVHIMQVVGRLRPEVSLAAAATELATIMQRVQAEHPGEDPAHTV
                     LVRDLKTTLTGNARLTLLLLLGSVGAVLLLACANLAGLTVTRASQREGEFAMRAALGA
                     SRWRLIRQLVVESTLLALVAGGVGIGCAAGLVTPMLGFLPAAVPRPGPIGLDLTVVAV
                     TLVVAGSAGVIIGVIAAIRAARHDPALRLRTTGQAATASVSRLRLQRGLVATQMALSV
                     VLLAGAGLLLQSFREVLRIDPGYRTDSTLTAMVSLPSSRYSPSQVIRWYQDLPARLER
                     ISGVVSASAVSSLPVSGGLAQGDLTLEDQAFAPGQAPAVSYRRVLPNYFRTMGIPLIR
                     GREFTDQDRGEGAMVVVVGQSLADRFWPNQDPVGKRIKVGPPGGEPWLTIVGVVGDAR
                     YDQLEQPPRLDTYEPHAQRPRGTMGVVVRTAGDPLGLADAVRSGLREGDPVLPVWNVQ
                     SMDDRVSGSLDGRRFTTSILTGFGVAALLLAAIGIYGVSAYSVGRRRREFAIRLALGA
                     RPATVQRQVLRESLRVAGLGIMLGLPAGIVLTRMIRALLFDVSPSDPRIFGSAILLLG
                     AAVLAATWLPARSATRTDPVTALRE"
     gene            complement(6190..6525)
                     /locus_tag="VGA78_03315"
     CDS             complement(6190..6525)
                     /locus_tag="VGA78_03315"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9892922.1"
                     /translation="MARELDLPQGTLDLLILKVLTWGPRHGYAIARLIEERTGERLTI
                     EEGSLYPALYRMERKDWLKAEWGTSELGRNAKFYSLTRAGRGQLVRETDHWRTVTDAV
                     DKVLRSDHA"
     gene            6614..7396
                     /locus_tag="VGA78_03320"
     CDS             6614..7396
                     /locus_tag="VGA78_03320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892923.1"
                     /translation="MPFISQWLIVALAAACSACLGSTPSGPRPDPDAQVRILFVGNSL
                     TYFNDLPGMVKALSDSLDVPTTQAAAVAFPDYALEDHWNQGEARSAIQQGSWTHVVMQ
                     QGPSALESSRQNLLQWIVPFDQAIREQGGLPGMYMVWPSSERSADFDRVSETYRLAAQ
                     AINGLLFPAGDAWRAAWRRDAALELYGGDGFHPTAMGTYLAAITIAAVIHQRSPVGMP
                     RGLTVASGSLTLPAATATLLQEAATEAIAAAPVGVPAQVIRR"
     gene            complement(7445..>8016)
                     /locus_tag="VGA78_03325"
     CDS             complement(7445..>8016)
                     /locus_tag="VGA78_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892924.1"
                     /translation="AGELGSHQFDVAVWMLNGLPARISGRGAIRLHDDGRIVFDTVGA
                     ELVWANGVALQWSATLASSYGGQFEVLHYVNAAIRLAWTHAWLFKEVDSPTQGWEVYA
                     TRQQFYNDEGIVLVADATKLAAQGRLKEGAGLPHTPLHYALADFFTAATEGKQPATPL
                     AVAARATALGVLANQAITTGSLVPVPPDL"
BASE COUNT         1319 a         2758 c         2671 g         1268 t
ORIGIN      
        1 cccgacctcc agccccagcc ccgatttctt cggcggccgg cgaccgggag ataaccgatg
       61 ggggaattcg gtggtggcct tgaagggcag caccggggaa gtggtctggg gattccagac
      121 tgtgcatcac gatctgtggg actacgacaa cgccgcccag ccggtgctgg tgaccgtgcg
      181 ccagaacggc cgggagcggg cagcggtggc ccagccgacc aagacgggtt ctctcttcct
      241 gctcgaccgg tcaaccggtg agctgctgtt cccggtcgag gaacgaccgg tgccaccgag
      301 ccgggtcccg ggcgagtcgg cctggccgac ccagccattt ccaacccttc cccggccctt
      361 gatgccccag gggcggttac gcccggagga cgcgttcggc ttcaccccgg tggagcggga
      421 agagtgtcgg gccctgctga cgcgctaccg gtccgaaggg atctacactc cgcccgatac
      481 cttgggcacg ctgatgtatc cgggcaacgc ctccgggacc aactggggca gtgcggcctg
      541 ggatccggaa cggcagctgc tggtcctcaa caccgcccgg ctggtcacgc tggtgcagtt
      601 gatcccccag gattcactcg cggcgtcgcg cgcggcgctg ggcgaatatg agcacggcag
      661 tatgcgcggc gtcccctttg ccatgcggag gaaaacggtg gagtcgtcca ccggcattcc
      721 ctgcaatccc ccgccctggg gaacgctggc ggccgtccac ctccccaccg gccaggtgaa
      781 gtgggaggtg cctctgggac tggtgccgga ctgggtaccc caagccgggg actcgatcgg
      841 caaaaccatg ggggtgccta acaccggagg accactggtc accgccgggg ggctggtctt
      901 catcggggcc acggtggacg gcatgttccg cgccttcgat accgacaccg ggcgggagct
      961 gtggagcgcc aagctgccgc ggggcgggat ggcgacgccg atgagttaca cggtgaacgg
     1021 caaacagtat gtcgtgatcg cggcaggtgg ccacgggaaa atggatcttc cgaccgggat
     1081 cggcgattgg ctggtggcct tcgtcctgaa gtagcccgct ggttccagag gagaaagcat
     1141 gaagcgcgtg acgatgctgg tgacgttgct actgggagcc ggcggtcccg ccgagggaca
     1201 accggcaccc cgacgggtga tcctcttcat cggggacggc gtagggacgg cctactggag
     1261 cgccgcccgg ctcgcgacgg actcgttggc ggtcgagcgc ctccgcatca tggggttggt
     1321 ggacaaccgg agctcggaca acctcgtcac cgacagcggc gccggggcga cggtgtatgc
     1381 gacgggcatt cgcaccttca atggcgcgat cggggtgggc ccggactcaa tgccgctccg
     1441 gaccgtcctc gaggcggccc gcgaccgagg ctgggcgacc ggcctggtcg cgacctcgac
     1501 cctcacccac gccacacccg cctccttcgc cgcccacgtg ccatcgcgtg cttccgaatt
     1561 cgaaatcgcc cgacagatgg tcgatgcccg ggtcgatgtc atgctgggcg gcgggcggcg
     1621 gtacttcgac ggccggaccc ggcccgactc ggttgatctg ctcgccaccc ttcgccgcca
     1681 atacaccgtc gtcgaaaccg ccgaggcgtt ccgggccctc gatctccggc ggacccgacg
     1741 ccttgtcggg ctgttcgccc cgagccagat gcccgctgcg gcaacccggg ttcccagcct
     1801 cccggacatg acccgcgccg cgctcgcggt gttggggcaa gatcccgacg ggttctttct
     1861 gatggtggaa ggttcgcagc ccgattggcg gggtcacgcc aaccaaccgc tcgaccaggt
     1921 gaccgccgag atgctcgatt tcgatggagc catccgggtc gcggtcgagc atcagcgtgg
     1981 ccatccggaa actctgatcg tggtcgtagc ggatcacgag actgggggcc tgtccctcga
     2041 gctgacccgc gacagtctgg ccttcgaggc ggcggctcag aatctggtga gtgggatgga
     2101 gcccctggcc gctgtgcggg cactgctgtc ttccgagcag caggacgaga tcgcgcggct
     2161 ctcgcgggag ctgggcgcta cggcatcccg gatgagaatc gaggcttccc ggcgcggtgc
     2221 ttcgagcagc ctggtagcac ggtacaccag ccccaaccac acggcggaaa tgacccccct
     2281 gttcgcctcc ggtcctgggg cggaacggtt cggtggcatc atcgacaact ggcgggtcgg
     2341 ccgtcttctc ctggaaatcg tggaacgcta gtctccagcc gggagtcgca gcagcaccct
     2401 caccatgggc atccgtccct gacctggtcc gtctcatccc gccgggctgg cggacagcgg
     2461 ccggatcctc ggtatcagtg gaaccagatc aggaaagcgg gtccaatgcg acacttccgg
     2521 tggggtcttt cagcggggct cctggtgttg ccatcggtga tggaagggca ggaggccgag
     2581 cgccggctgg cgttccgccc gccggggatg gaatcggtca cccgccaggc caacctcgcc
     2641 tacaaggccg tgccggcgac ggccgagaac cgcgactatg gggattcgct gcgctacgat
     2701 gtctaccggc cgccgggatc gacccggctg ccggccatcg tgttcatcca cgggggcatc
     2761 atccccggcg acaccgcggc cctgccggcc agcgccctgc ccaaggagtg ggactcctat
     2821 ctcgagtggg ggcgggctgc ggccgcggcg gggttcgccg ccatcacctt caatcaccgg
     2881 ctcacggtcc gcgaccaagt gataccggtc acggaagacg ttcgcgacct gatgcgcaca
     2941 gtacgagccc gggccgaccg ccacggcatc gaccccagcc gcatctgcgt cgccgtgttc
     3001 tcggccggcg gaccgctcgc caatctgttt ctccggcccg atggcgagcc ggtgcgctgt
     3061 ctgatcctct actacccctt tatggatctg gcgcacctgg gtgttcacac gcccttccgg
     3121 gggccccatg cccgcgcggc cctggacagc gccgccgcct gggacccatc gcgctacctg
     3181 atgacccggc ccgactcgct tccgccgctg cttctggccc gggccggacg ggacgccatc
     3241 ccgggtatca atgcatcgat cgaccggttt ctccagctgg cgctgctccg gaacgtccag
     3301 atcgatctct acacccatcc aaccggggcg cacgggttcg atagggtagc gggagcggat
     3361 gcccgggccg ccgagatcgt cgaggctacc ctggcctttg cccggcgata caccagcgag
     3421 cgggcgcgac ggcagtaggt cttcggtttc aagtgtcgga agggtcggaa aagtcggaag
     3481 agtcggaaca caccgcagtc ttccgactct tacgaccctt acgacccttc cgactcttac
     3541 gacccttccg actattccct caacgccgtg accgggtcgg tcctggtggc gctccgggcc
     3601 gggagccacg tggctgccag caccgcggct cccaggagga ggatggccga tccgaagatc
     3661 cgaggatcgc tgggtgagac atcgaacaac agggcccgaa tcattcgcgt cagcacgatt
     3721 ccggccggga ggcccagcat gatgcccagc cccgccaccc gaagcgattc ccgcagcacc
     3781 tgtcgctgga cggtagcggg tcgggcgccg agcgccagac gaatggcgaa ctcgcgccgg
     3841 cgccgtccca cgctgtacgc gctcacgcca tagatcccga tggccgcgag caggagcgcc
     3901 gcgactccga agccggtgag gatcgaggtg gtgaagcgac ggccatccag tgacccgctc
     3961 acccgatcgt ccatgctctg gacattccag accggcaaga ccggatcgcc ttcgcgcagt
     4021 cccgaccgga ccgcatcggc cagccccagg ggatcgcccg ccgtccggac caccaccccc
     4081 atggtgccac ggggccgctg ggcatgtggt tcgtaggtgt ccaaccgggg tggctgctcc
     4141 agctggtcgt accgcgcatc gcccacgact cccacaatcg tgagccacgg ctcgcctccg
     4201 ggcggaccca ccttgatgcg cttccccacc ggatcctgat tgggccagaa ccgatcggcc
     4261 agcgactgac ctacgaccac caccatcgcg ccttcacctc ggtcctgatc ggtgaactcc
     4321 cgtccccgga tcagaggaat gcccatggtg cggaagtaat tgggcagcac ccgccggtat
     4381 gagaccgccg gggcctgccc gggtgcaaag gcctgatcct ccagcgtgag atccccctgc
     4441 gccaggccgc ccgagaccgg cagggagctg accgcgctgg cgctcaccac gccggaaatg
     4501 cgttccagtc gcgccggtag atcctgatac cacctgatca cctgggatgg cgaataacga
     4561 ctcgacggga gtgataccat cgccgtcagg gtgctgtcgg tccggtatcc cggatcgatc
     4621 cgcaacacct cccggaaact ctgcagcagc agcccggcgc cggccagaag caccaccgac
     4681 aacgccatct gggtcgcgac caggccccgt tgcaggcgga gccggcttac gcttgccgtg
     4741 gccgcctggc cggtcgtcct gagccgcagg gccggatcgt gtcgggcggc ccggatggcg
     4801 gcgatgacgc cgatgatcac acccgctgaa ccggcgacga ccagagtcac cgccaccacg
     4861 gtcaggtcga gcccgatggg gccgggccgg ggcacggcgg ccggaaggaa accgagcatt
     4921 ggcgtgacca ggccggcggc gcagccgatg ccgaccccgc cggccaccag tgccagcagg
     4981 gtgctttcga ccaccagctg ccggatcagc cgccagcgcg atgcgcccag ggccgcccgc
     5041 atggcgaatt caccttcccg ttgcgacgca cgggtcacgg tgaggccggc caggttggcg
     5101 caggcgagca ggagcaccgc gccgacgctg cctaacaaca gcagcagggt taatcgggca
     5161 ttgccggtga gggtagtctt gaggtcacga accaggaccg tgtgtgcggg atcttccccg
     5221 ggatgctcgg cctggacccg ttgcatgatg gtggccagct cggtggcggc cgcggccagg
     5281 ctcacctcgg gacgcagccg tcccaccacc tgcatgatgt ggaccgagcg attgcgcatc
     5341 cacggctgga tcggacccca cggcgcccac gccgcaacgt cgggggtggg aaagcggaat
     5401 gacgccggca tgacgccgac gacggtgagc tgctcggtgt tgagcgtgat cgcccggccc
     5461 aggatggcca agtcgccgcc gaagtgggtc tgccaggcgg cgtgactgag aaccacgggc
     5521 cggccttcgg cgctctgctg gtccgccgcg gtcaaggtgc gccccattgc ggccggcgtc
     5581 cccaaagtcg gaaaaaactc ggccgtcacc agccccaggc tgactcgggg cgtgtcctcg
     5641 ctcaccagcg ttgcttcgct gccgtaccat ccggccaatc ccgcgaagct ccggctctgg
     5701 gattggagcg cttccaggtt cggcaccgaa acctcccaga cgtcgccggc ccggatgcgc
     5761 tcgttgagtg cgaccaagcg gccggaatcg gggtagggaa ggggccggaa caggatccca
     5821 taggcgaggg tgaacaccag tgcgttggcc gccaccacca gggccagggt gaggcccgac
     5881 gaaagggtgt aggcgggact gcgacgcagc gatcgcaccg cccaccgcag atcgtcgcgc
     5941 aggtccgcca gcagcgcgag tcgatccccc gaacgatctc ggctgcgagc cagctcttcg
     6001 caggccgccc gcaccgccgc atcggcgccg aaacggagcc gggcctgcgc ttcggcctct
     6061 tcccgagaga gcccccgttg catcgcctca ctgatcatca actccaggtg atggctgagc
     6121 tcgtcttcca cctcggcctg gacccccggc ttccacccca gccggcgcag ttgtttcccg
     6181 aagaggagcc tacgcatggt cgctccggag cactttgtcc accgcgtcag tcaccgtgcg
     6241 ccagtggtcg gtttcacgaa ccagctgacc gcggccggcg cgcgtgagcg agtagaactt
     6301 ggcgttccgc cccagctcgg acgtgcccca ctccgccttg agccagtcct tccgctccat
     6361 ccgatagagg gcgggataca gcgagccttc ctcgatggtc agccgctcgc cggtccgttc
     6421 ctcgatgaga cgggcgatgg catagccgtg gcgcggcccc caggtgagca ctttcaggat
     6481 gaggaggtca agggtcccct gcggcaggtc gagttcgcgt gccatcttga tacctagaag
     6541 tgtataccta gaatataata gtatgacgac ccagatcaga aacccccgtc ttcaccccgg
     6601 cgtagggcca ggtatgccgt tcatatctca gtggctgatc gtggcgctcg ccgcggcgtg
     6661 ctctgcttgt cttggcagca ccccctcggg tcccaggccc gatcccgatg cccaggtccg
     6721 gatcctgttc gtcggcaaca gcctcaccta tttcaacgac ctgcccggta tggtgaaagc
     6781 gctgtccgac tcgctggacg tcccgaccac gcaggccgcg gcagtcgcgt tccccgacta
     6841 tgcgttggag gatcactgga accagggtga agcccgcagc gcgatccagc agggcagctg
     6901 gacccacgtg gtcatgcagc aagggccgtc ggcactcgag tcgagccgac agaatctgtt
     6961 gcagtggatt gtcccgttcg accaggcaat ccgggagcag ggaggcctgc cggggatgta
     7021 catggtgtgg ccgtccagcg agcgaagcgc cgatttcgac cgcgtcagcg agacctaccg
     7081 gctggcggca caggcgatca acggactgct ctttccggcc ggagatgcct ggcgggctgc
     7141 gtggcggcgg gatgctgcgc tcgagctcta tgggggtgac ggctttcatc ccaccgcgat
     7201 ggggacctat ctggctgcga tcaccatcgc ggcggtaatc caccagcgtt cgcccgtggg
     7261 gatgccccgc ggccttacag tggcatcggg ttcgttgacc ctacccgccg ccacggccac
     7321 cttgctccag gaagccgcca ccgaagccat cgcggcggcg ccggtcgggg ttcctgccca
     7381 ggttatccgc agataacgca gatgtcgccg atggagcgac aggtgcagtt tcatcggttc
     7441 tgtctcagag gtccggagga accggcacca gcgagccagt cgtaatggcc tggttggcga
     7501 gcacgccgag cgcggtggct cgagccgcca ccgcgagggg cgtagccggc tgttttccct
     7561 cggtcgcggc ggtgaagaag tccgccaggg cgtaatgcag gggggtatgg ggcaacccgg
     7621 cgccctcctt gagccgccct tgggcggcga gcttggtcgc atcggccacc aacacgatgc
     7681 cctcatcgtt gtagaactgc tgccgggtgg cgtagacctc ccacccctga gtcggtgaat
     7741 ccacttcctt gaagagccag gcgtgggtcc aggccaggcg gatggcggcg ttgacgtaat
     7801 gcagaacctc gaactgaccg ccgtaggagc tggccagggt cgcgctccat tgcagggcga
     7861 cgccgttggc ccagaccagc tcggccccga ccgtgtcgaa cacgatgcga ccgtcgtcgt
     7921 gcaaccggat cgcgccccgc ccgctgatac gagccggaag cccgttcaac atccagacgg
     7981 ccacgtcgaa ctggtgcgag ccaagctcgc ccgcca
//
LOCUS       DASWKS010000106         4708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1900915, whole genome shotgun sequence.
ACCESSION   DASWKS010000106 DASWKS010000000
VERSION     DASWKS010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900915"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..899
                     /gene="priA"
                     /locus_tag="VGA78_03330"
     CDS             <1..899
                     /gene="priA"
                     /locus_tag="VGA78_03330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEX9892925.1"
                     /translation="SFLQCRSCGAVPECPHCSISLTLHRTPAALRCHYCDHRAAIPTA
                     CAECGHAIQAERGVGTQQLEQVIAERFPEARLARMDLDTTGARWAHQRILGAVERREV
                     DILLGTQMIAKGIDLPEVTLVGVVDADVALYLPDFRAAERTFQLLTQVAGRAGRGDRG
                     GRVIVQTRQPRHHALVYASTHDVQGFLAAEREQRESPPYPPAVALVNVIVSGSQEPAV
                     VQRATQLADWCAAISQRHHLSLTVLGPAPCPIARIKQRWRYHVVLKGDGKDLGRIVRT
                     LAPEIGSGEVRVAIDRDPASML"
     gene            complement(1071..3152)
                     /locus_tag="VGA78_03335"
     CDS             complement(1071..3152)
                     /locus_tag="VGA78_03335"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9892926.1"
                     /translation="MVAALLTLISLQSPADTVRDSTRSVRLTDLEVTVARRRESLAAL
                     PMAAAVIPRYELTRGQPTIGLDEALTLVPGVFVANRWNFSLDQRLSIRGFGSRANFGL
                     RGVKVYLDGVPQTLPDGQSQLTNVEIASLERVEVLRGASSALYGNASGGALLLESTAP
                     SSQPSGGYGRLQGGGFDSFKWLLGGTFRQDRWSGGVQVSRFTTDGFRQHSAAESRQLS
                     ATLRYVTDGTVATLKVAAADNPRAENPGALTVAELAARFDSAAGTNITRGADKRVEQQ
                     QASLRIEQPLGTSSRLAVTGFVLWRRLDNPLATPPPGPVTSTAGTWNGIDREGGGVRV
                     ELNLPLTPSWRATGGVDLQAMNDERENQRAEAGVPTGAVLLRQRERVLEAGPFAQLRW
                     QAAPGLTVDGGVRYDFLGFDVDDRFVDDGIDHGGYRRMSALSGNLGAAFEPAAGLSVY
                     GLVSTSFETPTTTELVNQTGTSAGFNPDLDPQRAVNVELGVRGRRGRVELTATGFVTR
                     VQDAIVQVREVSGRAFFDNAGRMRNRGLELGLVVTPARRLVLNGAYTWADYTFTEYVL
                     VNGAQADTLTGNRLAGIPRHFLRAGVRLGPVRGLTLDVDQLVSSSLFADDANTITVDG
                     WGAGVTNARLAWSGALGGFRLVPFVTLQNAFDRRYVGSVTINGFGGRVFEPSPGRHAV
                     VGMELGLTPGR"
     gene            3182..4261
                     /locus_tag="VGA78_03340"
     CDS             3182..4261
                     /locus_tag="VGA78_03340"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892927.1"
                     /translation="MTGRTSPDFAAPPFAGAPQARFEPAPSDGVLPDGFFSTSNLPTY
                     VHVGGKWLMPERPRMDCVIVRRGSGLEAVEPRLARRGDAVAMGLAEDGSDGIVVYSEG
                     FLGSVASPNEFRFMGTAVSRERPVNYDDLAARLEQERQLGGYLIWVPGPALVHSRARA
                     DFEWFIANGYVQAVLAGNAVAVHDIEAAIYGTTLGMTSTGQPTEGGHGLHMRAINRVR
                     AAGSIEAAVGSGLVQSGIMYTLVTRKVPWVLAGSIRDDGPLPGVISDMAAAQDAMRQY
                     TVRATGAIFIATALHAIAVGNMLPSFHTHRGAPEPLMTICVDQTEFIVNKLRDRGTHQ
                     AYGVVTNAQDFMHVLRMYVERCRRA"
     gene            4246..4647
                     /locus_tag="VGA78_03345"
     CDS             4246..4647
                     /locus_tag="VGA78_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892928.1"
                     /translation="MPPRLAQAEPGTGPGWERLAEALRPVLTPGTIDGIWVFRTMRAG
                     QREFGTAILSQVEGDRRRIYTARYALLIKGRQRGGFDWGLDEVGSGPLEALEELLALV
                     PVRGVEDEPPLPIEVAVWFPASEEGPGERGG"
BASE COUNT          738 a         1646 c         1593 g          731 t
ORIGIN      
        1 cctcgtttct ccaatgccgc agctgcgggg cggtgcccga gtgcccccac tgcagcatct
       61 ccctcaccct gcatcgcacg ccggcggcgc tccggtgcca ctattgcgat caccgggccg
      121 cgattcccac cgcctgcgcc gagtgcggcc acgcgatcca ggccgaacgg ggggtcggta
      181 cccagcagct ggagcaggtg atcgcggaac ggtttcccga ggcgcggctg gcccgcatgg
      241 acctggacac caccggcgcg cgctgggcgc accagcgcat cctcggcgcg gtggagcggc
      301 gcgaagtcga tatcctgctc gggacccaga tgatcgccaa ggggatcgat ctgcccgagg
      361 tgacactggt cggcgtggtc gacgccgatg tggcgctcta tctgccggac ttccgggcgg
      421 ccgaacgcac cttccagctg ctgactcagg tggccggccg ggccgggcgg ggggatcgag
      481 gcgggcgggt catcgtgcag actcgccaac cccggcatca cgccctggtc tacgcgtcga
      541 cccatgacgt ccaggggttt ctggccgcgg agcgggagca gcgcgagtcc cccccgtatc
      601 cgcccgcggt ggcgctggtg aatgtcatcg tctcgggaag ccaggagccg gccgtggtgc
      661 agcgtgccac ccaactggcc gactggtgcg ccgccatcag ccagcgtcac cacctaagcc
      721 tcaccgtgct gggaccggcc ccctgtccga tcgcccggat caagcaacgg tggcgctacc
      781 acgtggtgct caagggagac ggaaaggacc tgggacggat agtgcggact ctggccccgg
      841 aaattggaag cggggaggtg cgggtggcga ttgatcggga tcccgcctcg atgctctaac
      901 ctctaaacgg tgaacggtga acggtgaaca gtgaacagta aacggtcgac aggaccggct
      961 cactgcactc cgcctaacgt tccgttctcc tgcttcctgc ttcctgctcc ccgctccctg
     1021 ctccctgttt cccgctccct gctccctgct ccctgcttcc tgcttcctgc tcaccgtccc
     1081 ggcgtcagcc cgagctccat tcctactacc gcgtgccgcc ccgggctggg ctcgaaaacc
     1141 cggcccccga atccgttgat cgtcaccgag ccgacgtagc ggcgatcgaa ggcgttctgc
     1201 agcgtcacga acggcaccag ccggaacccg cccaacgcgc cgctccacgc cagccgggcg
     1261 ttcgtcacgc cggcacccca gccgtcgacc gtgatggtat tggcgtcatc ggcgaatagc
     1321 gacgagctga ccagctgatc cacgtcgagc gtcagccccc ggaccggtcc gagtcgcact
     1381 ccggctctga ggaagtggcg cgggatgccc gccagtcggt tcccggtgag ggtatccgcc
     1441 tgagccccgt tcaccaagac atattcggtg aaggtgtagt cggcccaggt gtacgcgccg
     1501 ttgagcacca accggcgagc gggcgtgacc acgaggccca gctccagtcc gcggttccgc
     1561 atccggccgg cgttgtcgaa gaaggcccgc ccgctcactt cccgcacctg cacgatggcg
     1621 tcctgaaccc gggtgacgaa tccggtggcg gtgagctcga cccgaccccg ccggcccctg
     1681 acgcccaact cgacattcac cgcccgctgc ggatcgaggt cggggttgaa cccggccgag
     1741 gttccggtct ggttgaccag ctcagtggtg gtcggggtct cgaacgaggt cgacaccagg
     1801 ccgtacaccg agagcccggc ggcgggctcg aaggccgctc ccaggttccc gctcaacgcg
     1861 ctcattcggc ggtagccgcc gtggtcgatc ccgtcgtcga caaaccgatc gtccacgtcg
     1921 aagccgagga agtcgtagcg gaccccgcca tcgacggtca ggcctggcgc cgcctgccag
     1981 cggagctgcg cgaaggggcc ggcctcgagc acccgttctc gctggcgcag caggaccgcg
     2041 ccagtgggaa ctccggcttc ggcgcgctga ttctcgcgtt cgtcgttcat cgcctgcagg
     2101 tcgactccgc cggtggcgcg ccacgacggg gtgagcggca ggttcagctc cacccgcacg
     2161 cccccgccct cccgatcgat gccgttccag gtccccgccg tcgaggtcac cggcccggga
     2221 gggggcgtag ccagcggatt gtccagcctg cgccacagca cgaagccggt gacggcgagg
     2281 cggctcgacg tgcccagtgg ctgctcgatc cggagcgacg cctgctgctg ctccacccgt
     2341 ttgtccgccc cccgagtgat gttggtcccg gccgcgctgt cgaagcgggc ggcgagctcg
     2401 gcgaccgtga gcgcgcccgg attctccgcc cggggattgt ccgcggccgc caccttgagc
     2461 gtggccacgg tgccgtccgt gacgtatcgc agcgtggcgc tcagctgccg ggactcggcg
     2521 gcgctgtgct gccggaaccc atcggtcgtg aagcgcgaga cctgcactcc acccgaccac
     2581 cggtcctggc gaaaggtccc gcctaacaac cacttgaagg aatcgaatcc gccaccctgc
     2641 aatcgcccgt agccgcccga gggttgggag gagggtgccg tcgattcgag cagcaacgct
     2701 ccgccggagg cattgccgta gagggcggac gacgcgccgc ggagcacttc gacccgttcc
     2761 agtgaggcga tctcgacgtt ggtgagctgg ctctggccgt ccgggagggt ctgggggacg
     2821 ccatccagat acaccttcac gccccgcagc ccgaagttgg cgcggctgcc gaaaccgcgg
     2881 atcgagagtc gctgatccag cgagaaattc cagcggttgg cgacgaagac acccggcacc
     2941 agtgtcagcg cctcgtccag cccgatggtg ggctggcccc gggtcagctc gtagcgcgga
     3001 atcaccgccg cggccatggg caacgccgcc agggattcgc ggcggcgggc gactgtcacc
     3061 tccagatcgg tgagccggac cgagcgggtc gaatcccgga ctgtgtcggc cggactctgc
     3121 agcgaaatga gcgtgagaag ggcggcgacc atgggtgcaa cctattagaa ttgttgcacc
     3181 tatgacaggc cgaaccagtc ctgatttcgc ggcgccaccg ttcgcgggag cgccccaagc
     3241 gcgcttcgaa cccgccccct cggacggcgt gctccccgac ggattctttt ctacctccaa
     3301 cctgccgacc tacgttcatg tcggcgggaa gtggctgatg ccggaacggc cccgaatgga
     3361 ctgcgtgatc gtgcggcggg ggagcggact ggaagcagtc gagccgcggc tggctcgccg
     3421 gggtgatgcg gtcgcgatgg gcctggccga ggatggcagc gacggaatcg tggtgtacag
     3481 cgagggattc ctgggcagcg tcgccagtcc taacgagttc cggttcatgg gcaccgcggt
     3541 gagccgggaa cgcccggtca actacgatga cctggcggcg cgcctggagc aggaacgaca
     3601 gctgggcggc tacctcatct gggtgccggg gccggcgctg gtgcactcgc gggcccgggc
     3661 cgacttcgag tggttcatcg ccaacggcta cgtgcaggcg gtgctggcag gcaacgcggt
     3721 tgcggtccat gacatcgaag ccgccatcta cgggaccacc ttgggcatga cctccaccgg
     3781 ccagccgacc gaaggcggcc atggcctgca catgcgcgcc atcaatcggg tccgggcggc
     3841 cggatcgatc gaggccgcgg tcgggtccgg cctggtgcag agcggcatca tgtacaccct
     3901 ggtcacccgg aaggtgccgt gggttctggc gggcagcatc cgggacgacg gaccactgcc
     3961 gggcgtcatc agcgacatgg ccgccgccca ggatgctatg cgccaataca cagtccgagc
     4021 caccggggcc atcttcatcg ccaccgcgct ccacgccatc gccgtcggca acatgctgcc
     4081 gtcctttcac acccaccggg gagcacccga acccctgatg accatctgcg tggatcaaac
     4141 cgagttcatc gtgaacaagc tccgggaccg cggcacccac caggcctatg gtgtggtcac
     4201 caacgcccag gatttcatgc acgtgcttcg catgtacgtc gaacgatgcc gccgcgccta
     4261 gctcaggcgg agcccggcac cggccccggg tgggagcggc tggccgaggc gctgcgaccg
     4321 gtcctcaccc ccggcaccat cgacggcatc tgggtgtttc gcaccatgcg tgccggtcag
     4381 cgcgagttcg ggaccgctat cctgtcgcag gtcgaaggcg accggcgccg gatctatacc
     4441 gcccgctacg ccctgctgat caagggccgc cagcgcggcg gattcgactg gggcctggat
     4501 gaagtggggt ccggtcccct ggaggcgctg gaggaactgc tggccctggt cccggtccgg
     4561 ggggtggagg acgaaccgcc cctcccgatc gaggtggcgg tgtggttccc cgcatctgaa
     4621 gaaggaccgg gtgaacgtgg gggttgacac cgatctcgcg ccgctccggg aacagttcgc
     4681 ccggtatctg agagaccggc ggctcccg
//
LOCUS       DASWKS010000107         3783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_45924, whole genome shotgun sequence.
ACCESSION   DASWKS010000107 DASWKS010000000
VERSION     DASWKS010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45924"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..459
                     /locus_tag="VGA78_03350"
     CDS             100..459
                     /locus_tag="VGA78_03350"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9892929.1"
                     /translation="MAFLAAHLTDARHYLCRKVGRATENPLGGVLEKGRTLDELEPLP
                     PIATIVSAWEAVSLHLMAVLDELDEASLAQTGHRFPGTDGTLLGMAGFLAQHDSYHIG
                     QMSLLRRQLGLPAMMYI"
     gene            complement(483..2168)
                     /locus_tag="VGA78_03355"
     CDS             complement(483..2168)
                     /locus_tag="VGA78_03355"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX9892930.1"
                     /translation="MTRISLGSLLLMVSAAGAGAQTGPNPVKHDPKPTVAAITPADLM
                     SRVYIFADDSMLGREAGTPAHLKGTEYIERELRRIGLEPAGDNGSFFQEFGLETIQPQ
                     VTVSVAGEALVQGADYLAFPFVQLPAIGAPFNAENVNVVFGGKLGTPNLVAPDAVVGK
                     LALFLPADGGAGWQFWSRFGPPQYQRYAGAKGLIIAALDVTPTEVRGLLQGEGQMRIA
                     GQGELQKGEIPTMFVSRSAAEKMMGGPVTGILPGAEGKPVTAKGWFGPVPTPAPARNV
                     VALVRGSDATLKSQYVVFGAHSDHDGIRSAVEHDSLRAFNTVVRPGGAEDTGKQPTAQ
                     QAGAVRAVLDSLRQAGPGRVDSIMNGADDDASGSMALLELAEFFAKNPARRSLLFVWH
                     TAEEKGLFGSAWYTDHPTVPRDSMVAALNVDMIGRGGPADLQGGGPGYVQLIGSRRLS
                     TQLGTLVEEVNVKGNHGFTFDYQYDADGHPQQFYCRSDHYNYARYGIPVVFFSTGSHR
                     DYHMVTDEPQYLDYEKLAKVTSLIGDVGKTVANLDQRPVVDKPKPDPKGECKQ"
     gene            complement(2254..3615)
                     /locus_tag="VGA78_03360"
     CDS             complement(2254..3615)
                     /locus_tag="VGA78_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEX9892931.1"
                     /translation="MRFITPALLLALASPLSGQQRSVGEAYGEVATRIIAAATKDSAA
                     WQKLARLSDTFGSRLSGSESLERAIDWVLAEMQREGLQNVRGENVMVPRWVRGAESAE
                     LVGPRRQRLPMLGLGGSIGTPPEGITADLLVVSSFDELKARAAQARGKIVLFDVPFTT
                     YGATVQYRGTGAIEAARVGAFASLIRSVTPYSMRTPHTGGMRYDSTVGRIPAAALTLE
                     DATMLHRMQDRGERIVVKLMMSAQTLPDARSRNIVAELRGRERPDEIVVMGGHIDSWD
                     VGSGAMDDGGGVVIAWEALRLLKALGLQPRRTIRVVGWTNEENGLRGGNAYRDQHSAE
                     LDNHVLAIESDGGVFRPVGFGFTGGDSARSILRQVVSLLRPIGADSLLAAGGGADIGP
                     IMQRGVPGMSHVVDGNRYFWYHHTDADTPDKLDPREVAQNVAAIALMSYVVADLPDRL
                     PRR"
BASE COUNT          614 a         1260 c         1248 g          661 t
ORIGIN      
        1 cggcacgatc ttctcgctca acacccggct gctccaccac tgcctggatg gagtggatga
       61 cccgctggcc aatcgccggg tgacgccggc accgatactc tggcgtttct ggcggcccac
      121 cttaccgatg cccgccacta cctctgccgg aaggtgggcc gggccaccga gaatcccctg
      181 gggggcgttc tggagaaggg ccgcacactg gacgagctgg agccgcttcc cccaatcgcg
      241 acgattgtct cggcgtggga ggccgtgtca ctccatctca tggcggtgct ggacgaactg
      301 gacgaggcgt cactggcaca gacgggacat cgatttccgg gaaccgacgg aaccctgctg
      361 ggaatggcgg gtttcctggc ccagcatgac tcctaccaca ttggccagat gtcgctgctg
      421 cgaaggcagc tgggattgcc ggcgatgatg tacatatagt actcagtact cagtactcag
      481 tactattgct tgcattcccc cttgggatcg ggcttcggct tgtcaaccac gggccgctgg
      541 tccaggttgg cgaccgtctt gccgacgtca ccgatgaggc tggtgacttt agcgagtttt
      601 tcatagtcca ggtactgcgg ctcgtcggtc accatgtggt aatcccggtg gctgccggtg
      661 gagaagaaga ccactggaat tccgtagcgc gcgtaattgt agtgatcgct gcggcagtag
      721 aactgttggg gatggccgtc ggcgtcgtac tgatagtcga acgtgaatcc gtggttcccc
      781 ttgacgttga cctcttccac caacgtcccc agctgggtcg aaagccggcg cgagccgatc
      841 agctgcacat atcccggtcc tccaccctgg agatcggccg gaccgccccg cccgatcatg
      901 tccacgttga gagccgccac catcgaatcg cgaggaaccg tcggatggtc ggtgtaccac
      961 gcgctgccga acaatccctt ctcctcggcg gtgtgccata cgaacaggag ggagcgcctg
     1021 gcggggttct tggcgaagaa ttcggccagc tccagcaatg ccatcgagcc ggaggcatcg
     1081 tcgtcggcgc cgttcatgat ggaatcgacc cggcccgggc ccgcctggcg caggctgtcg
     1141 agcacggccc ggaccgcgcc ggcctgctgc gccgtgggct gcttgccggt atcctccgcg
     1201 cctcccgggc ggactacggt gttgaaggcg cgaagcgaat cgtgctccac cgccgagcgg
     1261 ataccgtcgt ggtcgctgtg ggccccgaag accacgtatt gcgacttgag ggtcgcatcg
     1321 ctgccccgca ccagggcgac gacgttgcgg gccggcgcgg gggtcggcac cggaccgaac
     1381 catcccttgg ctgtcaccgg tttcccttcg gctccgggca gaatcccggt gaccggtcca
     1441 cccatcatct tctcggctgc cgaccgggac acgaacatcg tcgggatttc gcccttctgc
     1501 agctcaccct ggcccgcgat ccgcatctgc ccctcgccct ggaggagtcc cctgacctcg
     1561 gtcggcgtga catcgagcgc cgcgatgatc agccctttgg cgccggcata tcgctggtat
     1621 tgcggcgggc caaaccggga ccagaactgc catccggcgc cgccatcggc cggcagaaac
     1681 agcgccagct tgccgacgac agcatcgggg gccaccaggt tgggggtgcc caacttcccg
     1741 ccgaacacga cgttgacgtt ctcggcattg aagggggcgc cgatggcggg aagctggaca
     1801 aagggaaaag ccagatagtc ggcgccctgc accagggcct cgccggccac gctcacagtg
     1861 acctggggct gaatcgtctc caggccgaac tcctggaaaa aggagccgtt gtcgccggcg
     1921 ggctcgaggc cgatccggcg cagctcgcgt tcgatgtact cggtgccctt gaggtgggcc
     1981 ggcgtgccgg cctcgcgacc gagcatcgaa tcgtcggcga agatatagac ccggctcatc
     2041 aagtcggctg gcgtaatggc cgctacggtc ggcttggggt cgtgcttgac cgggttgggg
     2101 ccggtctgcg cgcccgcgcc ggctgccgag accatcagta gaagactgcc gagagaaatc
     2161 cgcgtcatga tccttcctgg gtgtattcag tcagaagggc caggcggtgc ctggccccac
     2221 tcaaagatag acgacccggg gtcagggcgt gtttcagcgg cgtggcagcc gatcgggtaa
     2281 gtcggccacc acgtaggaca tgagcgcgat ggccgcgacg ttctgggcta cctcgcgggg
     2341 gtcgagctta tcgggggtat cggcatcggt gtgatggtac cagaagtagc ggttgccgtc
     2401 gaccacgtgg ctcatcccgg gcaccccgcg ctgcatgatg ggcccgatgt cggccccgcc
     2461 tcccgcagcg agcaggctat cggcgccgat ggggcggagc aggctgacca cctgccgcag
     2521 aatcgagcgg gcactgtctc caccggtgaa gccaaacccc accggccgga acaccccgcc
     2581 gtcggattcg atggccaaca cgtgattgtc gagctcggcc gagtgctgat cccggtaggc
     2641 gttgccgccc cggaggccgt tctcctcgtt ggtccacccc accacccgga tggtccggcg
     2701 gggttgcagg cctaacgcct tcagcagccg gagcgcctcc caggcgatca ccacaccgcc
     2761 cccgtcgtcc atcgcgccgc tgccgacgtc ccaggaatcg atgtgaccgc ccatcacgac
     2821 gatctcgtcc gggcgctccc ggccgcgcag ctccgcgacg atgttgcgcg accgtgcgtc
     2881 cggaagagtc tgggcgctca tcatcagctt caccacgatg cgctcgcccc ggtcctgcat
     2941 ccggtgcagc atcgtcgcgt cctccagcgt gagcgccgcg gccggaatcc ggccgacggt
     3001 ggagtcgtat cgcatgccgc cggtgtgcgg ggtccgcatc gaataaggcg tgaccgatcg
     3061 gatcagcgag gcgaacgcgc ccacccgggc cgcctcaatg gctccggtgc cgcggtactg
     3121 caccgtggcg ccgtaggtgg tgaagggcac atcgaacagt acgatcttcc cccgcgcctg
     3181 ggccgcccgc gccttgagct cgtcgaagct ggagaccacg agcaggtcgg cggtgatccc
     3241 ctccggcggt gtcccgatcg acccacccaa tcccagcatc ggcagccgct ggcgccgagg
     3301 accgaccagc tcggccgatt cggcgccgcg aacccagcgg gggaccatga cgttctcgcc
     3361 ccgcacgttc tggagcccct cgcgctgcat ctcggccagg acccagtcga tggcgcgttc
     3421 caggctttcg ctgccgctca agcgggagcc gaacgtgtcg ctgaggcggg cgagcttctg
     3481 ccaggcggcc gagtccttgg tcgctgccgc gatgatccgg gtggcgacct caccgtatgc
     3541 ctcgccgacc gaccgctgct ggcctgagag agggctggcg agggccagga gcagtgccgg
     3601 ggtgatgaac cgcatgggtg gtcctctcgt gattcgtgac taagggcttg tgacggaata
     3661 actgactcat ggctgtcggt gtttcgggcg aatcgtgtag ttccaatcgc cgtgaaacgc
     3721 atgcgggacg agatggacct gtgccatctg ctgatccgtc acggtcgttc ccctggggta
     3781 ctg
//
LOCUS       DASWKS010000108         9127 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_792969, whole genome shotgun sequence.
ACCESSION   DASWKS010000108 DASWKS010000000
VERSION     DASWKS010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9127
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792969"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VGA78_03365"
     CDS             complement(<1..419)
                     /locus_tag="VGA78_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892932.1"
                     /translation="MIDFRSGREPKSSSFDYISIRIAAPEEIRGPRDPKERERVELQG
                     NRNWWSWGEVTKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICD
                     RCGVEVTLSKVRRERMGHIELSVPVVHIWFFKTLPSP"
     gene            complement(428..4894)
                     /gene="rpoB"
                     /locus_tag="VGA78_03370"
     CDS             complement(428..4894)
                     /gene="rpoB"
                     /locus_tag="VGA78_03370"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEX9892933.1"
                     /translation="MADIRSEISFSKRESGMPMPHLLDIQTRAFDALMVPDDLEGERQ
                     DVSLERVFRDLFPISDVNGKYELTFKSYAIGEPKYTVEECIERDMTYAAPLKATLALN
                     VFEDVDGQRRLKNQIEKEVYLGELPMMTPLGTFVINGAERVVVSQLHRSPGVVFEEDI
                     HPNGQRLFSARIIPFRGSWVEFTIDIHDVIYVHIDKKKKFPATALLRAFGYGTNADVL
                     KLFFATKVLDISGKLEGRQERREVLGSLLAAEVSNPEEPAGDKLGQVGTELTPELLNR
                     MRHVGVKQVTIFAGYTGLDLRDEDMPTTMRERERHVLAFDVPDPETGEVLADAGTTVT
                     DALRQRLVKAGVVKVDVLLPAGRSESPLIKNTLAKDPTKNEADALQQIYSLLRPGDAP
                     NLDTARQALQRLFFNPRRYDLGRVGRHKINLRLKLKTDPNHTVLTEEDFIAIVRYLID
                     LADGRGHTDDIDHLGNRRIRSVGELIANQFSVGLSRMARLVKERMSINSDPEKISLDD
                     LVNARTVSAVIQAFFGSSQLSQFMDQTNPLAELTNKRRLSALGPGGLTRERAGFEVRD
                     VHYSQYGRMCPIETPEGPNIGLITSLATYARINDLGFIETPYRTVRNGRVTNEIRWLS
                     ATEEEDFAVAQANAAVGPDGKLEDNLVLSRKGDDYPLLPPERIDYMDVAPDQLVSIAA
                     ALIPFLEHDDANRALMGSNMQRQAVPLLFPQAPIVGTGLEGKVAQDSGAVIMARRSGT
                     ITRVNADEIIIDAGQDGPAVGDQPLARLAQVDRYRVKKFWRTNQDTAINQRPLVQVGS
                     KVTQGAVIADGAATEQGELALGANVTVAFMPWYGHNFEDAIVLSERLVKDDVYSSIHI
                     QELELHVRDTKRGQEEITREIPNVSDEALVDLDERGIVRIGAHVKPGDILVGKITPKG
                     ETELSPEEKLLTAIFGEKAKDVKDSSLKVPPGMKGTVIDVKIFSRVEDQVVEKDRGER
                     IGEVRRVEHEEKARISTVMLEELKALLEGQEVALMLKAGTVEEYIAPGSKLTREQLAS
                     VDLTQVDLKTLRLVNKPANERIRLTIDSATRERAKVEEKAEDQIDKILQPDELPPGVI
                     QLVKVYLGEKRKISVGDKMAGRHGNKGIVARIVPEEDMPFLPDGTPVDIVLNPLGVPS
                     RMNVGQILETHLGWCATLLGFQAKTPVFRGATENEIGVLLRLAGLVWAGQGLALRHKA
                     PTVDGATIDAVLSDLRHSAARTLTEATLADLNLRQASPVTRDLFDRVRQFVSASSVEL
                     GEREVALRRQEVIHHRALVAEAEGDRKKSLQKVLKELETAAGQSPADALEARGFAALA
                     ALARGGTAGADVAQAVEELIRAAGLTPSGKVRLRDGRAGQEFTNDVTVGTIYMLKLSH
                     LVDDKIHARSIGPYSLVTQQPLAGKAQFGGQRFGEMEVWALEAYGAAHLLQEMLTVKS
                     DDVNGRSKVYEAIVKGQNLPEPGIPESFNVLVKELQALGLKVHLGETAEGEE"
     gene            complement(5082..5468)
                     /gene="rplL"
                     /locus_tag="VGA78_03375"
     CDS             complement(5082..5468)
                     /gene="rplL"
                     /locus_tag="VGA78_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEX9892934.1"
                     /translation="MATTLSNDQIIEAIGNKSVVELAELIDAFKTKFNVSVVAAAAPA
                     GAGGGAAAAPAAEEQTEFTVILKEGGAKKIQVIKVVRELTSLGLKEAKDLVDGAPKTL
                     KEGISKAEAEEIKKKLEDQGAVVELK"
     gene            complement(5489..6025)
                     /gene="rplJ"
                     /locus_tag="VGA78_03380"
     CDS             complement(5489..6025)
                     /gene="rplJ"
                     /locus_tag="VGA78_03380"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEX9892935.1"
                     /translation="MSKTERQATVDALAERLKGSATLYITDFSGLPVDRMTDFRRRLR
                     AVGARYVVVKNSLARRALAAGAINAIEGDLLKGPIGIVLAGDDPLPAAKVLGEFAKLH
                     EKPSVRAGLVDGRQVAPAYVKRLGELPSRDALLSQFAGALNGILYQMVGVLEALRDQR
                     QAGGTEQSESTDSTDRTT"
     gene            complement(6022..6711)
                     /gene="rplA"
                     /locus_tag="VGA78_03385"
     CDS             complement(6022..6711)
                     /gene="rplA"
                     /locus_tag="VGA78_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEX9892936.1"
                     /translation="MATNGKKFRASAARIDRARDYAIDEACTLVKSSAFAKFDETVDA
                     AVRLGVDPRHADQVVRGTVVLPHGTGKSVRVLVIAQGDRAKEAEAAGADFVGPEYIQK
                     LKDGWLECDVIVATPDMMGQLGALGRILGPRGLMPNPKAGTVTMDVTKAVREIKAGKI
                     EFRVDKTGNVHAPIGKVSFSATQLRDNLQAFLETIVKAKPSAAKGTYLRSASISSTMG
                     PGIRLDTSGYR"
     gene            complement(6711..7136)
                     /gene="rplK"
                     /locus_tag="VGA78_03390"
     CDS             complement(6711..7136)
                     /gene="rplK"
                     /locus_tag="VGA78_03390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006676477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEX9892937.1"
                     /translation="MAKKITAVVKLQCPAGAANPAPPVGTALGPHGVNIMEFCKQFNA
                     RTQGQPGMVIPVIVTIFADRTFTFITKTPPAANLLLKEAGVEKGSATSNRTKVGKVTR
                     AQLKKIAELKMADLNASDVDSAMRMIAGTARSMGLEVAD"
     gene            complement(7307..7852)
                     /gene="nusG"
                     /locus_tag="VGA78_03395"
     CDS             complement(7307..7852)
                     /gene="nusG"
                     /locus_tag="VGA78_03395"
                     /inference="COORDINATES: protein motif:HMM:TIGR00922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEX9892938.1"
                     /translation="MATYRWYAIQTTAGHEKKVCSLLLQRIGDDPRPVEEKLVKQALV
                     PTQEVIEIKNGKKVLVERKLYPGYVLIETTMSQEAQHLVNSVQGVIKFVGTGKAPQPL
                     RPEEVNRLLGIAEETSETAPKEEIPFLVGQAVEITEGPFADFSGTVEEVLPEKGKVKV
                     SVSLFGRPTTVEMDYLQLRGH"
     gene            complement(7863..8102)
                     /gene="secE"
                     /locus_tag="VGA78_03400"
     CDS             complement(7863..8102)
                     /gene="secE"
                     /locus_tag="VGA78_03400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEX9892939.1"
                     /translation="MEQAPVNAPAGLAARIGAFRGFLVHVQAELKKVTWPTRPELIKA
                     TRMVVILSFILGIAIGLVDWLLQLILVRGVAAIAQ"
     gene            complement(8102..8254)
                     /gene="rpmG"
                     /locus_tag="VGA78_03405"
     CDS             complement(8102..8254)
                     /gene="rpmG"
                     /locus_tag="VGA78_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEX9892940.1"
                     /translation="MPREKIILECTTCKSRNYFTDKNRRVHPERVEWKKFCPRCNKHL
                     LHKESK"
     gene            complement(8716..>9127)
                     /gene="tuf"
                     /locus_tag="VGA78_03410"
     CDS             complement(8716..>9127)
                     /gene="tuf"
                     /locus_tag="VGA78_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312930.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEX9892941.1"
                     /translation="VEMFRKLLDDGQAGDNVGLLLRGVEKAEIERGMVLAKPNSMTPH
                     TKFHAEVYVLTKEEGGRHTPFFKGYRPQFYFRTTDVTGAVELPAGVEMVMPGDNVQMT
                     IELIMPIAAEEGLRFAIREGGRTVGAGVVTKILA"
BASE COUNT         1401 a         3151 c         2836 g         1739 t
ORIGIN      
        1 atcggggacg gcagggtctt gaagaaccag atgtggacca ccggcacgct gagctcgatg
       61 tggcccatcc gctcgcgccg gaccttgctg agggtgactt cgacgccgca gcggtcgcag
      121 atgacgccgc gatagcggat ccgcttgtac ttgccgcaat gacattccca gtccttgacc
      181 gggccgaaga tgcgctcgca gaagagccca tccttctccg gcttgaagga gcggtagttg
      241 atcgtctccg gcttggtcac ctcgccccag gaccaccagt tccggttgcc ctgcagctcc
      301 acccgttccc gttccttcgg gtcgcgcggc ccccggatct cttccggggc ggcgatgcgg
      361 atcgagatgt agtcgaaact cgaactcttg ggctcacgcc cgctgcgaaa atcgatcatg
      421 atccgggtta ctcctcaccc tcggccgttt cgccgagatg gaccttgaga cccagggcct
      481 gcaattcctt gacgagcacg ttgaacgact cgggaatccc gggctcgggc aggttctgcc
      541 ccttgacgat ggcttcgtag accttgctgc ggccgttcac gtcgtcggat ttcaccgtca
      601 gcatttcctg caggaggtgc gcggcgccgt acgcctccag cgcccacact tccatttcac
      661 caaagcgctg gccgccgaac tgggccttgc cggccagagg ctgctgcgtg accagcgagt
      721 agggcccgat cgagcgggcg tggatcttgt cgtcgaccag gtggctcagc ttgagcatgt
      781 agatggtgcc gaccgtgacg tcgttggtga attcctgacc cgcccggcca tcccgcagcc
      841 gcaccttgcc ggagggggtc aggccggcgg cgcggatcag ctcctccacc gcctgggcca
      901 catccgctcc ggccgtgcca ccccgcgcca gcgcggcgag cgcggcgaac ccgcgcgcct
      961 ccagcgcgtc ggccgggctc tggcccgcgg cggtctcgag ctccttgagc accttctgga
     1021 ggctcttctt gcgatcgcct tcggcctcgg ccaccagcgc ccgatggtgg atcacctcct
     1081 ggcgccgcag ggccacttca cgctcgccca attccacgct ggaagcgctc acgaactgcc
     1141 gcacccggtc gaacaggtcg cgggtgaccg gggaggcctg gcgcaggttc agatcggcca
     1201 gggtcgcttc cgtcagggtg cgggccgccg agtgccgcag atcgctcagc accgcgtcga
     1261 tggtggcccc atccacggtc ggcgccttgt ggcgcagcgc caaaccctgt cccgcccaga
     1321 ccaggccggc gaggcggagc agcaccccga tctcgttctc ggtggcgccg cggaagaccg
     1381 gcgtcttggc ctggaagccg agcagggtgg cgcaccagcc caggtgggtc tccaggatct
     1441 ggcccacgtt catgcggctg gggaccccca gcggattgag cacgatgtcc accggggtgc
     1501 cgtcggggag gaacggcatg tcctcctccg gcacgatccg cgcgacgatg cccttgttgc
     1561 cgtgccggcc ggccatcttg tcgcccaccg atatcttccg cttctcgccc aggtacacct
     1621 tcaccagctg gatcacgccc ggcgggagct cgtccggctg caggatcttg tcgatctgat
     1681 cctcggcctt ctcttccacc ttggcccgct cgcgggtggc ggaatcgatg gtgagacgga
     1741 tccgctcgtt ggcgggcttg ttgaccagcc gcagggtctt gagatccacc tgggtcagat
     1801 cgacgctggc cagctgctcc cgggtgagct tggagccggg cgcgatgtat tcctccaccg
     1861 tgccagcttt gagcatgagg gccacctcct gcccctcgag caacgccttg agctcttcca
     1921 gcatcacggt gctgatgcgg gccttctcct cgtgctccac ccgccgcact tcgccgatcc
     1981 gttcgccccg gtccttctcg accacctgat cctcgacccg gctgaagatc ttgacgtcga
     2041 tgaccgtgcc cttcatgccg ggcggcacct tgagcgaaga gtccttcacg tccttggcct
     2101 tctcgccgaa gatggccgtg aggagctttt cctcgggcga cagctcggtc tcgcccttgg
     2161 gcgtgatctt gccaaccaga atgtcgcccg gcttcacgtg ggccccgatc cgcacgatgc
     2221 cccgctcgtc caggtccacc agcgcttcgt cggagacgtt ggggatttcc cgggtgatct
     2281 cctcctgccc ccgcttggtg tcgcggacgt gcagttccag ctcctggatg tggatcgagg
     2341 agtacacatc gtccttgacc agccgctcgg acagcacgat ggcgtcttcg aagttgtggc
     2401 cgtaccatgg catgaacgcc acggtgacgt tggcccccag ggccagctcg ccctgctcgg
     2461 tggcggcgcc gtcggcgatg acggcgccct gggtcacctt gctgccgacc tgcaccaggg
     2521 gccgctggtt gatcgcggta tcctggttgg tgcgccagaa cttcttcacc cgataacgat
     2581 ccacctgggc cagccgggcc agcggctgat cgcccacggc cgggccgtcc tggccggcgt
     2641 cgatgatgat ctcatcggcg ttgacccggg tgatggtgcc cgaccgacgg gccatgatca
     2701 cggcccccga gtcctgcgcc accttgccct cgagcccggt gcccacgatg ggcgcctggg
     2761 gaaagagcaa cgggaccgcc tggcgctgca tgttggaccc catgagcgcg cggttggcgt
     2821 cgtcgtgctc caagaacgga atcagcgccg cggcgatcga gaccagctgg tcgggcgcca
     2881 catccatgta gtcgatccgc tccggcggca ggagggggta gtcgtccccc ttccgggaca
     2941 acaccaagtt gtcctcgagt ttcccgtccg gccccaccgc cgcgttggcc tgggcgaccg
     3001 cgaaatcctc ctcctcggtg gccgaaagcc agcggatctc gttggtcacc cgcccgttcc
     3061 tcaccgtccg gtacggcgtc tcgatgaagc cgagatcgtt gatccgggcg taggtggcga
     3121 gcgaggtgat cagaccgatg ttgggccctt ccggggtctc gatcgggcac atccggccgt
     3181 actgcgagta gtgcacgtcg cgcacttcga agccggcccg ctcccgggtg aggccgccgg
     3241 gtcccagggc cgagagccgc cgcttgttgg tcagctccgc cagcgggttg gtctggtcca
     3301 tgaactgcga cagctggctc gacccgaaga aggcctggat cacggccgac acggtgcggg
     3361 cgttgaccag atcgtccagc gagatctttt ccggatcgga gttgatgctc atccgctcct
     3421 tgaccagccg ggccatccgc gagaggccga ccgagaactg gttggcgatc agctcgccca
     3481 ccgaccggat gcggcggttg cccaggtggt cgatgtcgtc ggtgtgtccc cgcccgtcgg
     3541 ccaggtcgat cagataccgc acgatcgcga tgaagtcctc ttcagtcagg accgtgtggt
     3601 tcggatcggt cttgagcttg agccgcaggt tgatcttgtg ccggcccacc cggcccaggt
     3661 cgtagcgccg cgggttgaag aacaggcgct gcagcgcctg acgggccgtg tccaggttgg
     3721 gggcgtcgcc cggccggagc agactgtaga tctgctgcag cgcgtcggct tcgttcttgg
     3781 tcggatcctt ggccagcgtg ttcttgatga gcgggctctc cgaccggccg gccggaagca
     3841 gcacatcgac cttcactaca ccggccttga ccagccgctg gcgcagcgcg tcggtgaccg
     3901 tggtcccggc atcggccagc acttcgccag tctcgggatc gggcacgtcg aatgcgagca
     3961 cgtgacgctc ccgctcccgc atggtggtgg gcatgtcctc atcccgcaga tccagcccgg
     4021 tatagccggc gaagatggtg acctgcttca ctcccacgtg tcgcatccgg ttgagcagct
     4081 cgggcgtgag ctcggtcccg acctggccca gtttgtcgcc cgccggctct tccgggttgg
     4141 acacctcggc cgccagcagg ctgcccagca cctcacgccg ttcctgccgc ccctccagct
     4201 tgccgctgat atcgagcacc ttggtggcga agaagagctt gagcacgtcg gcattggtcc
     4261 cgtagccgaa ggcgcgcagc aacgcggtgg cggggaactt cttcttcttg tcgatgtgca
     4321 cgtaaatcac atcgtggatg tcgatggtga actccaccca cgagccccgg aagggaatga
     4381 tccgggccga aaacagccgc tggccgttgg ggtggatgtc ctcctcgaac accaccccgg
     4441 gagaccggtg cagctggctc accaccaccc gctcggcccc gttgatgacg aaggtgccga
     4501 gtggggtcat catcggcagc tcgccgagat acacttcctt ctcgatctgg ttcttgagcc
     4561 ggcgctgccc gtccacgtct tcgaacacgt tgagcgccag ggtggccttg agcggggccg
     4621 cgtaggtcat gtcccgctcg atgcactcct cgaccgtgta cttcggctcg ccgatggcgt
     4681 aggacttgaa cgtcagctcg tacttgccgt tcacgtcgct gatcgggaag aggtcgcgga
     4741 acacccgttc cagcgacacg tcctgccgct cgccctcgag gtcatccgga accatgaggg
     4801 cgtcgaaggc ccgggtctgg atgtccagaa gatgcggcat gggcatgccg ctctcgcgct
     4861 tggaaaaact gatttcactc cggatgtcag ccatcgaatc tcccgcccag cacaaagagc
     4921 cccgtggcga ggcgtccccg gttacctcgg gaacccccgc ggggcgttga taaccgcgtc
     4981 agttcttcag ctcgcgtcgt ctgcgcatgt cgcctcgctg agagtagcgt ttgccagcca
     5041 gatccctcgc cggtggagcc ggctcgggat agcgctgcgc gctacttcag ctcgacgacc
     5101 gcgccctgat cttcgagctt tttcttgatc tcttcggcct cggccttgga gatgccctct
     5161 ttgagggtct tgggagcgcc atcgaccaga tccttggcct ccttgagacc caggctggtg
     5221 agctcgcgca ccaccttgat gacctggatc ttcttggccc cgccttcctt gaggatgacg
     5281 gtgaactcgg tctgctcttc ggccgccgga gcggcagccg cgccaccgcc ggcaccagcc
     5341 ggggcggccg cggccaccac agagacgttg aacttcgtct tgaaggcgtc gatcagctcc
     5401 gcgagctcca ccaccgactt gttgccgatg gcctcgatga tctggtcgtt ggagagagtg
     5461 gttgccattg tcgctgttcc ttcccgcttc aggtggtgcg gtcggtactg tcggtgctct
     5521 cgctctgctc cgtcccgccg gcctggcgct ggtcgcgaag cgcttcgaga acgccgacca
     5581 tctgatacag aatcccgttg agcgctccgg cgaactggct caggagcgcg tcgcgcgagg
     5641 gcagctcgcc caggcgcttg acgtaggccg gcgcgacctg gcgaccatcc accagcccgg
     5701 cccggaccga cggcttctcg tgcagcttgg cgaactcgcc cagcaccttg gcggccggca
     5761 gcgggtcatc gcccgccagc acgatgccga tcggtccctt gaggagatcg ccttcgatcg
     5821 cgttgatggc gccggcggcg agggcccggc gggccaggct gttcttcacc acgacgtagc
     5881 gggccccgac ggcgcgcagg cgccgccgga agtcggtcat gcgatcgacc ggcaggccgc
     5941 tgaaatccgt gatgtagagt gtggccgacc ccttcaagcg ctcggcgagc gcgtcgacgg
     6001 tcgcctggcg ttcggtcttg ctcatcggta ccccgacgtg tccagccgga tgcccggccc
     6061 catcgtgctc gagatcgagg ccgaccgcag atacgtccct ttggcggccg acggcttggc
     6121 ttttacgatc gtctcgagaa aggcctgcag gttgtcccgc agctgcgtcg ccgagaagga
     6181 cactttgccg atcggggcgt gcacgttgcc ggtcttgtcc acccggaact cgatcttacc
     6241 ggccttgatc tcccggaccg ccttggtcac gtccatagtg accgtgccgg ccttggggtt
     6301 cggcatcagg ccgcggggtc ccaggatccg gcccagcgcg cccagctgcc ccatcatatc
     6361 cggcgtggcg acgatcacat cgcactcgag ccagccgtct ttcagtttct ggatgtactc
     6421 cggtcccacg aagtccgccc cggccgcttc ggcttccttg gcccggtcgc cctgggcaat
     6481 gaccaggacc cggacgctct taccggtgcc gtgaggcagc accacggtcc cccggaccac
     6541 ctggtcggca tggcggggat cgaccccgag ccggaccgcg gcgtccaccg tttcgtcgaa
     6601 cttggcgaac gccgaggact tgaccagggt acaggcctcg tcgatagcgt agtccctggc
     6661 ccggtcgatc cgggcggccg aggcgcggaa cttcttgccg ttggtcgcca tcagtccgcc
     6721 acctccagcc ccatcgaccg cgccgtcccg gcgatcatgc gcatggccga gtcgacgtcg
     6781 gaggcattga gatcggccat cttgagctcg gcgatcttct tgagctgggc ccgagtcacc
     6841 ttccccacct tggtgcggtt cgaggtggcg ctgcccttct cgacccccgc ttccttgagc
     6901 aggaggttgg ccgccggagg cgtcttggtg atgaacgtga aggtgcggtc cgcgaaaatg
     6961 gtcacgatca ccgggatgac catgccgggc tgcccctggg ttctggcgtt gaactgctta
     7021 cagaactcca tgatgttcac gccgtgcgga cccagcgcgg tgcccacggg cggcgcggga
     7081 ttggccgcgc cggcgggaca ctgcagcttc accaccgcgg tgattttctt tgccattcga
     7141 tctaccctct cgacccgtct gagtctgccg caaatggccg tgcggtcgcg gatcaaccaa
     7201 taggactaag gaaaggacta aggactaagc aaggacaata gacctcgatg gaccaaggaa
     7261 ctacttagtc ctcagtccta agtccttagt cctagcagcg gcgccgtcaa tgtccgcgga
     7321 gttgcaagta gtccatctcc accgtggtcg gccggccgaa caggctgacc gacactttga
     7381 ctttgccctt ctcgggcagc acttcttcga ccgtgccgct gaagtcggcg aagggtccct
     7441 cggtgatctc caccgcctgg ccgaccagga aggggatctc ttccttggga gccgtctccg
     7501 aggtctcctc ggcgatgccc agcagccggt tgacctcttc cggccggagc ggctgaggcg
     7561 ccttgccggt ccccacgaac ttgatgacgc cctgcacgct gttgaccagg tgctgggcct
     7621 cctggctcat ggtggtctcg atcaggacat agccgggata gagcttccgc tccaccagca
     7681 ccttcttgcc attcttgatc tcgatcactt cctgggtcgg taccagggcc tgcttcacca
     7741 gcttctcctc caccggccgg ggatcgtccc cgatccgctg cagcagaagc gagcacacct
     7801 tcttctcgtg gccggcggtc gtctggatcg cgtaccagcg gtaagtcgcc atggtaagca
     7861 tcctactgcg cgatcgccgc gacgccgcgg accagaatca actggagcag ccagtcgacc
     7921 aggccgatgg caatacccag aatgaacgac agaatcacca ccatccgggt ggctttgatc
     7981 agctccgggc gggtgggcca ggtgaccttc ttcagttccg cctggacgtg caccagaaac
     8041 ccccggaagg ctccgatccg ggccgccagt ccggcgggcg cgttaaccgg cgcctgttcc
     8101 actacttgga ctccttgtgc aacagatgct tgttgcaccg gggacagaat ttcttccatt
     8161 ccacccgttc gggatgaacg cggcggttct tgtcggtgaa atagttgcgg ctcttgcagg
     8221 tcgtgcactc gaggatgatc ttttcgcgcg gcatcgccac atccttccgt caccggtcgc
     8281 caaggcagcg caccgttcag tgagggcggg actcgggacc tggacgaccg gtgcccgata
     8341 cagaaggcgg aatcgacgga acccggtgga caacaccgaa tcgcccgaca cccgcgtgcc
     8401 gctcaaaagc gcccgcctct ggtaccgccc aacgtcccgg tggtcaacgc acggcaggct
     8461 tgccgctttg atgctcccac cggactcgtg tgcccgaaaa ccgagcaatg cattcccagg
     8521 cagactctta tactagatac gtcgtacgcc gttgtcaact gacataggtc taacgactta
     8581 ggtccaggga ctaagtagca ccgagggcca ggggcgatcg gaggtaccaa gtcctttccg
     8641 atcaccagcc tggccctcgt tgttgcacgc cttcgtacct ggtcctgctt ggtccttagt
     8701 cctcagtcct cagtcctatg ccaagatctt ggtgaccacg cccgcgccca ccgtccgccc
     8761 gccttcgcgg atggcgaagc gcagcccctc ttccgccgcg atcggcatga tcagctcgat
     8821 cgtcatctgc acgttgtccc ccggcatcac catctccacc cccgccggca gctccaccgc
     8881 ccccgtcacg tccgtggtcc ggaagtagaa ctggggccgg tagcccttga agaacggggt
     8941 atgccgcccc ccctcctcct tggtcagcac gtacacctcg gcgtgaaact tggtgtgcgg
     9001 cgtcatcgag ttcggcttcg ccagcaccat cccccgctcg atctccgcct tctccacccc
     9061 ccgcaacaac aaccccacgt tgtctcccgc ctgcccgtcg tccagcagct tgcggaacat
     9121 ctccacc
//
LOCUS       DASWKS010000109         8785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1157260, whole genome shotgun sequence.
ACCESSION   DASWKS010000109 DASWKS010000000
VERSION     DASWKS010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8785
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1157260"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VGA78_03415"
     CDS             <1..1021
                     /locus_tag="VGA78_03415"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX9892942.1"
                     /translation="GRPTHLLLMTALLEVQDLVKHYRSGGWLAGGGKTVFAVNGVTFH
                     IASGETLALVGESGCGKSTVGRTVLRLLEPTSGRVVFEGNDLSALNRSSLRALRRRMQ
                     IVFQDPYSSLNPRLTIGASVAEGLEIHRLLPRSEIPHRVGSLLEEVGLDPVMAERYPH
                     EFSGGQRQRIGIARALAVEPTFLVCDEPVSALDVSVQAQILNLFVDLQQRRGLAYLFI
                     AHDLAVVRQIAHRVAVMYLGVIVEEGEAETVIGRPRHPYTRALISAVPVPDPERQRMR
                     IVLPGDPPSPTVRPPGCPFFSRCFHPSKNDRCTVETPPLREVDGRLAACHYAEILPAA
                     VNGQQ"
     gene            1105..1890
                     /locus_tag="VGA78_03420"
     CDS             1105..1890
                     /locus_tag="VGA78_03420"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEX9892943.1"
                     /translation="MDLWQIDAFADRPFSGNPAAVCWLEEERDDGWRQAVAAEMNLAE
                     TAFLTAGPDGFGLRWFTPGLEVDLCGHATLASAQYLWESGRLAPGTVARFHTRSGLLT
                     AVRDGEWIVLDFPATPPQPAPAPAELEPGLGLTPRWVGRTAFDVFVELDNAAQVRQLT
                     PNLEHLTGIPARGIIVTAAGDRQGVDFVSRFFGPAAGVPEDPVTGSAHCALGPFWAER
                     LGKTRLIGFQASKRGGTVRVEVLGDRVLLGGQAITVLRGTLLA"
     gene            complement(2098..2610)
                     /locus_tag="VGA78_03425"
     CDS             complement(2098..2610)
                     /locus_tag="VGA78_03425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892944.1"
                     /translation="MTSRRRIGLLLAAGLAGFYLVVLVVVSLTSRTVVLPRGEPLRFC
                     GAYLDCHLSAAVRDLEIQPGPAGGLRYRVIVRFASDAKRATLPIRQLKAVLLVPGGVR
                     LEPVATPRYLEVGAGQSLEVDFVFNSLNPINDPVLWLSEGASVARLAEKLLVGDPDSF
                     LHKPVLLALK"
     gene            complement(2625..3329)
                     /locus_tag="VGA78_03430"
     CDS             complement(2625..3329)
                     /locus_tag="VGA78_03430"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR00055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HEX9892945.1"
                     /translation="MSGLHVAIIMDGNGRWAEAQGLQRAAGHREGARAVRRVVEAAPG
                     LGIGTVTLYAFSSDNWRRPSEEVSWLMRLFRTHLRSERRSLTANGVRLNVVGRRDRLP
                     QELRSEIEATERATQNGEQLWLRVAVDYSARDAIVRAAQLAGPDIDRARFERLLTLVD
                     HSAPVEPVDLLIRSGGERRLSDFLLWECAYAELHFTPRLWPDFNAEDLEAAIRDFHQR
                     DRRFGGLTSDRQAGAA"
     gene            complement(3326..3721)
                     /locus_tag="VGA78_03435"
     CDS             complement(3326..3721)
                     /locus_tag="VGA78_03435"
                     /inference="COORDINATES: protein motif:HMM:NF024988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX9892946.1"
                     /translation="MADRSAARRARPVEAAPPRGLEASPGQDAASSSLELDRLIHERV
                     RLAIVSALAVTPSLTFNDLKHILGTTDGNLSVHARKLEEAGYVTVTKSFAGRMPRTEY
                     ALTGAGRTALERYVGHMEDLIRMMKGQER"
     gene            complement(3714..4235)
                     /locus_tag="VGA78_03440"
     CDS             complement(3714..4235)
                     /locus_tag="VGA78_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892947.1"
                     /translation="MARATPVTAVPGWGGVAMGVSALGAAWLAARQANPAEWLAVWLG
                     EAILALSIGGFTFVRKAQRTGEPGLSYAGKQFVGNFTPPLVAGGLLTPVLYQAGLSHL
                     LPGVWLLLYGTAVTTAGAFSIRVVPIMGLCLMAVGGAALFAAPTAGDLFMAIGFGGFQ
                     IGFGLIIARRYGG"
     gene            4480..6084
                     /locus_tag="VGA78_03445"
     CDS             4480..6084
                     /locus_tag="VGA78_03445"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HEX9892948.1"
                     /translation="MLHPGFAAATAAVQTPRDSAFHALNRLGFGPAVGQLDSLARTGV
                     MAWIEHQISVKGPQDSRLASREASFQVLSASRAEMVERFTILQRERAQARRDSSMAPG
                     AVRRPAAGRGVREAGAELQQATLVRAALSRHQLAEVMADFWFNHFNVFLGKGLDRVLT
                     PSYVEETIRPNALGRFEDLLLAVARSPAMLFYLDNVQSVAPGSKPPQLERLDRARGRG
                     GRRLDPARRQRLDSLMQTAEQRRPTGLNENYARELLELHTLGVDGGYTQKDVTDVARI
                     LTGWGIAPPREGAGFQFHEWAHDRGEKTVLGVSFPSGKGEAEGVRLLRMLAAHPATMH
                     HVSGKLCARFVSDLMPDGCTDAAVAAWKRSQGDIREVLRAIVRSPDFWAPATVGSKVK
                     TPMEFLVSAVRAVAGQPDSTPRLAQQLVRLGQPLYLQAVPTGYPETQEDWVNSGALLT
                     RMNVAVALAAGRMAGVTVDLDAITPLSSDRTALVERVNLALLGGRMSARTRDVILRET
                     ADLTDPAMARALAVGLALGGPEFQRQ"
     gene            6081..7325
                     /locus_tag="VGA78_03450"
     CDS             6081..7325
                     /locus_tag="VGA78_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEX9892949.1"
                     /translation="MITRRAFVRGGGLALVSLGVDPVFLDRAAYALNRTGGTGGKTLV
                     CLFQRGAVDGLNMIVPHGDAAYYRERPRIAIPRSALVDLDGHFGLHPGLAGLGPFWEG
                     GSLAVVHAVGSPDSTRSHFDAQDYMESGTPGLKSTPDGWANRYCRHAREHSETPFRAV
                     AFGPQLPRILAGPSPALAIDDLRTFGLQTARREGNDKLTRAFEALYQGSATGLLATSS
                     AEGFDAIQRLRQADPTRHRPANGAEYPRGRLGQHLTQVAQLIKAELGLQIAFVDVGGW
                     DTHVNQGAEQGQLSARLTELGAALAGFATDLGERMRDVVVLTMSEFGRTVRENGTSGT
                     DHGHATAMLVLGGGVKGGRVVGRWPGLDPSARFEGRDLAVTTDFRDLFAEVLTRHLGQ
                     ADLSAIFPEHKTGPATFPGVFT"
     gene            complement(7364..8161)
                     /locus_tag="VGA78_03455"
     CDS             complement(7364..8161)
                     /locus_tag="VGA78_03455"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX9892950.1"
                     /translation="MDPFRSLQLLSRRSFVGMGLTGLAASLSGACLTDPEDDQVNDGR
                     LSARPRAPTGTATSGIVGLNLGGFRDGVLLVPEGYAAPQPVPLMVLFHGAGGAGSQVL
                     QRFSEAAQEFKVAIVAPDSRGSTWDRIFTGQFRTDVTFIDQVLNLVFDRVAVDPTRVV
                     AAGFSDGASYALSLGLTNGDLFTRIAAFSPGFSNPGDRVGNPPIFISHGTADPVLPID
                     VTSRRLVPELHALGYGVRYREFEGGHAVPAAIAREGVEWLTGAAAVP"
     gene            complement(8264..>8785)
                     /locus_tag="VGA78_03460"
     CDS             complement(8264..>8785)
                     /locus_tag="VGA78_03460"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEX9892951.1"
                     /translation="GTIPAQADPRVPWKRDIEAGAPDIAFDGVTPQFDLTLYAGRDAS
                     SVFGKGEEARLIEAEAALQAGDNAAWLATLNALRAGVAGLAALVDPGTADGRVDLMFS
                     ERAFWLFATANRLDDLRRMIRQYGRSANDIFPTGTHHKGPAYGNDVNFPVPDQEKQNP
                     NYSDGISCIDRNA"
BASE COUNT         1476 a         2931 c         2948 g         1430 t
ORIGIN      
        1 cggcaggccc acgcatcttc tcctcatgac ggctctgctc gaggtgcagg acctggtcaa
       61 gcactaccgg tccggcggct ggctggccgg cggtggcaag acggtattcg cggtgaacgg
      121 ggtgaccttc cacatcgctt cgggtgaaac cctggctctg gtgggcgaat ccggctgcgg
      181 caagtcgacg gtgggtcgga ccgtgctgcg cctgctggag cccacctcgg gccgcgtggt
      241 cttcgaaggg aacgacctga gcgccctgaa ccggtcgtcc ctgcgagccc tccggcgccg
      301 gatgcagatc gtgtttcagg atccctacag ctcgctcaat ccccgcctca ccatcggcgc
      361 gtcggtcgcg gaaggcctgg agatccatcg cctgcttccc cggtccgaga tcccgcaccg
      421 ggtgggaagc ttgctggagg aagtcgggct cgatcccgtc atggccgagc gctatcccca
      481 tgaattctcg ggcggacagc ggcagcggat cggcatcgcg cgcgccctgg cggtcgagcc
      541 cacctttctg gtctgcgatg agccggtctc agccctcgat gtctcggtgc aggcccagat
      601 tctcaacctg ttcgtggatc tgcagcagcg ccgcggcctg gcctacctct tcatcgcgca
      661 cgacctggcc gtggtgcgcc agatcgccca ccgggtggcg gtgatgtacc tgggagtgat
      721 cgtggaggaa ggcgaggccg agacggtcat cggacggcct cgtcatccgt acacccgcgc
      781 gctcatctcc gccgtgccgg tcccggatcc ggagcggcag cgcatgcgca tcgtgctccc
      841 gggcgatccc ccgagcccga cggtgcggcc gccggggtgt cccttcttct cgcgctgttt
      901 ccatccctcg aagaacgacc gatgcaccgt cgaaacccca ccactccggg aggtggacgg
      961 gcggctggcg gcgtgtcact atgcggaaat cctgccggcc gcggtgaacg gccaacagta
     1021 aacggtaacc ggctttcacc cttcaccgtt taccgtttac cgttcactgt tcactgttca
     1081 ctgttcactg tttaccgagg ctccatggat ctctggcaga tcgacgcctt cgccgaccgg
     1141 cccttcagcg gcaaccccgc ggccgtctgc tggctcgagg aggaacgcga cgatggctgg
     1201 cgacaagcgg tcgccgccga gatgaatctg gccgagaccg ccttcctgac ggctgggccg
     1261 gacggcttcg gtctgcggtg gttcaccccg ggtctggaag tggatctgtg cggccacgcg
     1321 acgctcgcca gcgcgcaata cctgtgggag agcggacgcc tcgcgccggg caccgtggcg
     1381 cgctttcaca ctcgcagcgg actgctcacg gcggtccggg atggggagtg gatcgttctg
     1441 gacttccccg ccacaccacc ccagccggcg ccggcgccgg cggagctcga accggggctc
     1501 ggactcacgc ctcgctgggt cgggcgtacc gcgttcgacg tcttcgtgga gctggacaat
     1561 gccgctcagg tccgtcagct gacacccaac ctggagcacc tgaccgggat tcccgcccgc
     1621 ggcatcatcg tcaccgcggc cggagaccgc cagggggtcg atttcgtctc gcggttcttc
     1681 ggccccgcgg ccggcgtgcc ggaagatccg gtgaccggtt cggcccactg tgccctggga
     1741 ccattctggg ccgaacggct ggggaagacc aggctgatcg gatttcaagc ctcgaagcgg
     1801 ggaggaaccg tacgggtgga ggtcctggga gaccgcgtcc tgttaggcgg acaggcgatc
     1861 acggttttgc gaggaaccct gctcgcctga cgagggctcg gggccctggg atccccgacc
     1921 gggcatcaag gatgaggggt cggtcgatgt ccgaaaatcc cggattgtgg ctgaatggat
     1981 cccaagcacc gaaaccggaa aacgcggcca taaaagaaag atccgttgat ccgccccatc
     2041 cgcagcatcc ggttgaaccg tcggaccttg atgccggggt gagagcgagt caagtagcta
     2101 tttcagcgcc agtagcaccg gtttatgcag gaaactgtcc ggatccccga cgagcagctt
     2161 ctcggccagc cgcgcgaccg aggcgccctc ggataaccac aggaccggat cgttgatcgg
     2221 gttgagcgaa ttgaacacga aatcgacctc gagggattgg ccggccccga cttcgaggta
     2281 gcggggcgtc gcaacgggct cgagcctcac gccgccgggc acgagcagca cggccttaag
     2341 ctgacggatc ggcagcgtgg cccgtttggc gtcgctggcg aatcgcacga tcacccggta
     2401 gcgcaatccg ccggcaggcc cgggctggat ttccagatcg cgcaccgcgg cgctcaaatg
     2461 gcaatcgagg tacgcgccgc aaaatcggag cggctcgccc cgcggaagca ccaccgtccg
     2521 gctggtgaga gagaccacta ccagtaccac gagatagaat ccggccaggc cggcggccag
     2581 cagcagaccg atgcgtcgtc gggaggtcat ggttcgaaag gggttcaggc cgcgccggcc
     2641 tgacggtccg aggtgaggcc cccaaaccgc cgatcgcgct gatggaagtc gcggatggcg
     2701 gcctcgaggt cctcggcatt gaagtcgggc cacagccggg gggtgaagtg cagctcggcg
     2761 taggcgcact cccagaggag aaaatcgctc aggcgccgct caccgccgga gcgaatcagg
     2821 agatcgaccg gctccaccgg cgcagaatgg tcgaccagcg tcagcagccg ttcaaaccgg
     2881 gcccgatcga tatcgggacc ggcgagctgt gcggcccgga cgatcgcgtc ccgtgcggag
     2941 tagtcgaccg caacccgaag ccacaactgc tcaccgttct gggtcgcccg ttcggtcgct
     3001 tcgatctcgc tgcggagctc ctggggaagg cggtcgcgcc ggccgaccac gttcagacga
     3061 accccgttgg cggtgaggga gcgccgctcc gaccgcaagt gggttcggaa caaacgcatc
     3121 agccaggaaa cctcctcgga gggccggcgc cagttgtccg atgagaaggc gtacagggtc
     3181 accgtcccga tgccgagacc gggtgccgcc tcgaccactc ggcgcactgc acgggctcct
     3241 tcccggtgcc ccgccgctcg ttgcaggcct tgggcctcgg cccagcggcc gttcccgtcc
     3301 atgatgatcg cgacgtgcag accgctcacc gttcctgtcc tttcatcata cgaatcaggt
     3361 cttccatatg ccccacgtag cgctccagcg cagtccgccc ggcgccggtc agcgcatact
     3421 ccgtgcgcgg catccgtccg gcgaacgatt tggtcaccgt cacgtatccc gcttcctcca
     3481 gcttccgagc gtgaacgctc aggttgccgt cggtggtccc gaggatgtgt ttgaggtcgt
     3541 tgaaggtgag cgacggggtg acggccaggg cgctgacgat ggccagccga acccgttcat
     3601 gaatcaaccg gtcgagctcg agcgacgagg aggcggcatc ctgccccgga ctggcttcca
     3661 ggccgcgcgg cggagcagcc tccaccgggc gggcccgacg ggccgccgag cgatcagcca
     3721 ccgtacctcc gggcgatgat cagaccgaat ccgatctgga acccgccgaa cccgatggcc
     3781 atgaagagat cacccgcagt cggcgcggcg aacaacgcag ccccgcccac cgccatcagg
     3841 cagagaccca tgatgggaac cacccggatg gagaacgcgc cggcggtcgt gaccgccgtg
     3901 ccgtacaaca gcagccatac ccctggcagc aggtgcgaca gtcccgcctg gtacagcacc
     3961 ggcgtcagca gccccccggc gacgagcggc ggagtgaaat tcccgacgaa ttgcttaccg
     4021 gcgtaagaca agcccggctc accggtgcgc tgcgccttcc ggacaaaggt gaaaccgccg
     4081 atgctcaagg cgagaatcgc ttcgcccagc cacacggcca gccattcggc cgggttggcc
     4141 tggcgggcgg cgagccaggc cgcgcccaga gccgagacac ccatggccac gccaccccag
     4201 cctgggacgg cggtaaccgg agtcgctcgc gccatggtgg cgcggataaa cgaaaggtct
     4261 tcagccgctc gtcggtggag cggctcggga tcaggtgatg ggacccgtag aggccgagac
     4321 atcatgtagc aagatagacg aagcccaatt acccgtcaag tactctgtgt tataaagtag
     4381 atccgggatc cttgtcttaa cgaagccgta ccacccaacg tccatcgacc aatgagatct
     4441 ctccgcccag cgcttcttct gcagttgtct gcgctctgca tgctgcatcc tggcttcgcc
     4501 gccgcgacag cggcggtgca aacgcccaga gattccgcct tccacgccct gaatcggctt
     4561 gggttcggcc ccgccgtcgg acaactcgac tcgctggccc gtaccggtgt catggcgtgg
     4621 atcgagcacc agatctccgt caaaggccct caggattcca ggctcgcgag tcgtgaggcg
     4681 tcgttccagg ttctgagcgc ttcgcgagcg gaaatggtcg agcgcttcac catactgcag
     4741 cgggagcggg cccaggctcg tcgggattcc agcatggctc cgggagcagt ccgacggccc
     4801 gctgcaggcc gcggggtgag agaggcggga gccgaactgc agcaggccac gttggtccgg
     4861 gcggctcttt cccgccatca gctggcggag gtcatggccg acttctggtt caaccacttc
     4921 aacgtcttcc tcggcaaggg tctcgaccga gttctcacgc cctcgtatgt cgaggagacc
     4981 atccggccga acgccctggg ccgtttcgag gacctgctcc tcgcggtggc ccgaagcccc
     5041 gccatgctgt tctacctcga caacgttcag agcgtggcac cgggttcaaa gccgccgcag
     5101 ttggagcggc tggatcgggc ccgcggccgt gggggtcgcc ggctcgatcc ggcccgccgc
     5161 cagcggctgg attcgctgat gcaaacagcc gagcagcgac ggccgaccgg gttgaacgag
     5221 aactatgccc gggagctgct ggagctgcac accctgggtg tggacggtgg atacacccag
     5281 aaggatgtca cggacgtcgc ccggattctg acgggttggg gcattgcgcc gccccgcgag
     5341 ggagccggtt tccagtttca tgaatgggcc cacgaccgcg gggagaagac ggtgctggga
     5401 gtgagcttcc cgtcgggcaa gggtgaagca gagggggtgc gccttctccg aatgctggcc
     5461 gcgcatcccg ccaccatgca tcacgtgagc ggcaagctgt gcgcccgctt cgtgagcgat
     5521 ctcatgcccg atggctgtac cgatgcggcc gtggcggcct ggaagcgaag ccagggcgac
     5581 attcgcgagg tgcttcgcgc catcgtgcga tcgcccgatt tctgggcccc cgccaccgtg
     5641 ggatccaagg tcaagacccc aatggagttc ctggtcagcg ccgtgcgcgc tgtggcgggt
     5701 cagccggact cgacgccgcg actggcccag cagctggttc gtctcggtca gccgctctac
     5761 ctgcaggcgg tcccgaccgg ttatccggaa acccaggaag actgggtgaa cagcggcgct
     5821 ctgctcaccc ggatgaacgt ggccgtggcg ctggccgcgg gacgaatggc gggggtgacg
     5881 gtcgacctcg atgccatcac gccgttgtcg agcgaccgga cggccctggt ggaacgggtg
     5941 aacctggctc tgctgggggg ccgcatgtcg gcccggactc gcgacgtgat cctgcgagaa
     6001 acggcggatc tcaccgaccc ggcgatggcc cgcgcgctcg cggtcggtct ggcactgggc
     6061 gggccggagt tccagcgaca atgatcaccc gtcgagcctt tgtccgcggc ggggggttag
     6121 ccctcgtcag cctgggcgtc gatccggtct tcctcgatcg agcggcctac gccctcaacc
     6181 ggaccggcgg caccggcggc aagactctgg tctgcctgtt ccagcgcggt gccgtcgacg
     6241 gcctcaacat gatcgttcct catggtgacg ccgcgtatta tcgcgagcga cctcgtattg
     6301 ccatccccag gagcgcgctg gtcgatctcg acgggcactt cgggctccat cccgggctgg
     6361 ccggtctcgg gccgttctgg gagggtggct cactcgcggt ggtgcacgcg gtcgggtcac
     6421 ccgattcgac ccggagccat ttcgacgccc aggactacat ggagtcgggc actcccgggc
     6481 tcaagagcac gccggatggc tgggccaatc ggtactgccg ccacgcgcga gaacacagcg
     6541 agacgccgtt tcgggccgtg gcgttcggcc cccagctgcc gcggattctg gccggcccct
     6601 cacccgcgct cgcgatcgac gatctcagga ctttcgggct gcagacggct cggcgcgaag
     6661 gtaacgacaa gctgacccgg gcatttgaag cgctctatca gggctcggcc accggccttc
     6721 tcgccacctc gagcgccgaa ggtttcgacg ccatccagcg gctgcgtcag gccgatccca
     6781 ctcgtcatcg tcccgcgaat ggggccgaat acccccgggg ccggctaggc caacacctga
     6841 cgcaggtcgc tcagctcatc aaggcggaac tcggcctcca gatcgcgttc gtggatgtgg
     6901 gcggctggga cacgcacgtc aatcagggcg ccgagcaggg ccagctgagt gcccggctga
     6961 ccgaactagg cgctgcgctg gccgggttcg ccacggacct gggtgaacgg atgcgcgacg
     7021 tggtggtatt gacgatgtcg gagttcggcc gcacggttcg tgagaacggc accagcggaa
     7081 ccgaccacgg tcacgccacc gccatgctgg tgctgggtgg cggagtgaag ggtggccggg
     7141 tggtgggccg ctggcccggt ctggatccgt ctgccaggtt cgagggccgg gacctggcgg
     7201 tgaccacgga ctttcgagat ctcttcgccg aagtgcttac ccggcatctg ggccaggctg
     7261 atctgtcggc aatcttcccg gaacacaaga cggggccggc gacgttcccg ggggtcttta
     7321 cctagtactt ggtactgagt actgagtaat cagtacttct atctcacggc acagcggccg
     7381 ctccggtcag ccattccacc ccctcccgcg cgatggcggc cggcacggca tgtccccctt
     7441 cgaactcgcg gtagcggacc ccgtagccca gggcgtggag ctccggcacc agacgtcggc
     7501 tggtgacatc gatgggcagc acggggtcgg cggtcccgtg cgagatgaag atgggcggat
     7561 tgcccacccg atcacccggg ttggagaagc cgggagaaaa ggcggcgatc cgggtgaaca
     7621 gatcgccgtt ggtgagcccc agtgacagcg cgtagctggc gccgtcggag aacccggccg
     7681 ccaccaccct cgtcgggtcc accgcgaccc ggtcgaatac cagattcaag acctgatcga
     7741 tgaaggtcac gtcggtccgg aactgaccgg tgaagatccg atcccaggtg ctgccccgag
     7801 aatcgggcgc cacgatcgcg accttgaact cctgggccgc ttccgaaaag cgttgcagca
     7861 cctgtgagcc ggctccaccc gccccgtgga agagcaccat gagcggcacc ggttggggcg
     7921 cggcataccc ttctggaacg agtagcacgc cgtcccggaa ccctcccagg ttcaggccca
     7981 caatccctga cgtcgcagta ccagtaggtg ctctgggccg ggcggagagc cggccgtcat
     8041 tgacctgatc gtcctcgggg tcggtcaggc aggctcctga caggctcgcg gccagaccgg
     8101 tcagtcccat tcccacaaac gagcggcgcg acagtagctg cagcgaacgg aacgggtcca
     8161 cagtcgggtc cttgattgtg tgatgggtgg ggggaaggcc cgcgagaagg ggaggccgga
     8221 ttggcctccc ctcacgcccc caggacccta cgggaccaac gtcctatgcg ttccggtcga
     8281 tgcaggagat cccgtcggaa tagttgggat tctgcttctc ctgatccggc accgggaagt
     8341 tcacatcgtt gccgtaggcc gggcctttgt ggtgggtgcc ggtcgggaag atgtcgttag
     8401 cactgcggcc gtactgccgg atcatacgcc gcaggtcgtc cagccggttg gcggtggcga
     8461 agagccagaa ggcgcgttcc gagaacatca ggtccacccg gccatccgcc gtgccgggat
     8521 cgaccaacgc ggccagaccg gccacgccgg cccgcaaggc gttcaacgtc gcgagccagg
     8581 cggcgttgtc gccggcctgg agcgcggcct cggcctcgat cagccgggcc tcttcgccct
     8641 tcccgaagac ggaggacgca tcgcgccccg catacagagt caagtcgaac tggggggtga
     8701 cgccgtcaaa agcgatgtcc ggggcccccg cttcgatatc ccgtttccac ggcactcggg
     8761 gatcggcctg cgccgggatg gtccc
//
LOCUS       DASWKS010000110         4477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2634882, whole genome shotgun sequence.
ACCESSION   DASWKS010000110 DASWKS010000000
VERSION     DASWKS010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2634882"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2508)
                     /locus_tag="VGA78_03465"
     CDS             complement(<1..2508)
                     /locus_tag="VGA78_03465"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9892952.1"
                     /translation="MSVLVRFAGIGSLVLLLAVGGSAPLTAQGITTAALRGSITREEG
                     NAAVEGAVITLINADKGTRLRAISQASGRYNFENVDPGVYNIEVRAIGFEQTTKTGIV
                     LTLGQRSVQDFQLKAQVVVLQELQITATTDPLINSARTGPAQIVSDTAIHRSPLLGRN
                     FTSLLASSPQVQVTGSGGASIAGQNNRFNSILVDGSVNNDLFGLAAEGTPGGQSNVKP
                     LSIEAIQEFQVLVAPFDVRQGGFAGGLVNAVTKSGTNAWSGSLFGYFQNRDLVGKDTV
                     GNKFAEFTTRQFGGTISGPFIKDRMHLFVAADIQQRDQPFVGNSVTDPTIGITQAITD
                     RVANAIRTQYGFDPGTASEPVLSTPNQNVFAKVTYEATDNHHLEVSHNYVNGFNDQFS
                     RSTLNRNNRDGFQLSASGYEQRNRTNSTRLKWIGQFGRISTEFIGAFQTVRDKRQLPN
                     EVPLFIVGGNLTGNSFVAAGGERFSHGNSLDQNIGELTFNATTTVGDHQVTVGTHNEI
                     FTFNNVFWQAKYGIWTFDNVDSLEAGRAQRYEILLAGAERPDGPVADWGVKQYGLYAQ
                     DQWLVSPRLTLTFGARIDVPILDKPSSNPALASSVLGIDTGEFPSGNALISPRFGFNF
                     DLTGRGNTVVRGGVGIFSGRPPYVWLSNAFTGTGLEAVTLTCTGTNVPTVTADISSLP
                     TTCVGGGAPTPPAASIVAFDQDFKFIQSLRYAVGLDQKLPGGIVGTFDFVHTQSKNTM
                     YLTDANLNYDAAFTTAEGRRQYGTISATGSATPARLTTAFRDVLVHTNRSADYATSIT
                     GQLAKRFGSNLEFLAGYTYSRVKDLITLGSSIAFSNYQ"
     gene            complement(2765..4138)
                     /locus_tag="VGA78_03470"
     CDS             complement(2765..4138)
                     /locus_tag="VGA78_03470"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9892953.1"
                     /translation="MTQRDSYGERLPRTVGMLGAVAVLIGITIGSGIFRVPATVAGRV
                     TEPGPFMLAWVLGGVLALFGALTLAELAAMFPRSGGVFAFLEEGLGRLPAFLFGWSQL
                     AVIRASALGAISTIFAEYLGYFVPLTPRQVQYVAAAVITVVGAINYIGIKRAEFVTNI
                     ATIAKYGALVGLVLLAFTSERGDSANFTTTNWSTALNISAIGTALVSIMWAYDGWADL
                     TYMAGEVRDPGRVLPRALITGTLLIILIYVSVNAAYLYMVPIGEMAQQRLIASTAAER
                     IPLLGALGGSVIAGVVMLSTFSSVNGTMMASPRIFYAMADRGLFFQWIARVSPRFQSP
                     SAAIWLAVALGVTYVLFNDFQQLADKFVLGIWPFYILAVAGIFRLRKRLPDAERPYRA
                     LGYPVIPIVFLLAATGMVVNALITDPVNTGITFAIILAGIPVYFIWVGRSGRPADGQA
                     DGRTGGR"
     gene            complement(4169..>4477)
                     /locus_tag="VGA78_03475"
     CDS             complement(4169..>4477)
                     /locus_tag="VGA78_03475"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX9892954.1"
                     /translation="ESIRGYEVDDAARSVIERAGFGDFFVHRTGHSIDRDLHGSGPHI
                     DDYETRDDRLLMPGVGFSVEPGIYLPGDFGVRSEVNMYWGDQGPVVTPASPQMDLITA
                     "
BASE COUNT          806 a         1396 c         1518 g          757 t
ORIGIN      
        1 ctggtagttg gagaacgcga tggacgaccc cagagtgatg aggtccttca cccggctgta
       61 ggtatagccg gccaggaact ccaggttgct gccgaaccgc ttggccagct gcccggtgat
      121 cgaggtggcg tagtcggctg agcggttggt atggaccagg acgtcccgga aggccgtggt
      181 gagccgggcg ggcgtggcgc tgccggtggc actgatggtg ccgtactgcc ggcgcccctc
      241 ggcggtggtg aaggccgcgt cgtagttcag attggcgtcg gtcaggtaca tcgtgttctt
      301 cgactgggtg tggacgaaat cgaaggtccc cacgatcccg cccggcagct tctggtccag
      361 gcccacggcg tagcgcagcg actggatgaa cttgaaatcc tggtcgaagg cgacgatcga
      421 cgccgccggc ggagtgggcg cgccgccgcc gacgcaggtg gtcgggaggc tgctgatgtc
      481 cgccgtcacc gtcggcacat tggtcccggt gcaggtcagg gtcaccgcct cgaggccggt
      541 gccggtgaac gcgttcgaaa gccacacgta gggcggccgg cccgagaaga tcccgacccc
      601 gccccgaacc acggtattcc cccgaccggt caggtcgaag ttgaacccga agcgagggga
      661 gatcagggcg ttgcccgagg gaaactcgcc ggtgtcgatt cccaggacgc tcgacgccag
      721 agcggggttg ctgctgggtt tatcgaggat cggcacgtcg atccgggccc cgaaggtcag
      781 ggtcaaccgg gggctgacca gccactgatc ctgggcgtat aacccgtact gcttgacacc
      841 ccagtcggcc accgggccat cgggccgctc cgcaccggca agcaggatct cgtagcgctg
      901 ggcccgaccc gcctccagcg aatcgacgtt gtcgaaggtc cagatgccgt atttcgcctg
      961 ccagaagacg ttgttgaagg tgaagatttc gttgtgggtc ccgaccgtga cctggtgatc
     1021 gcccacggtc gtggtggcat tgaaggtcag ctcaccgatg ttctggtcca ggctgttgcc
     1081 gtgggagaac cgctccccgc cggcggcaac gaacgaattg ccggtcaggt tgccgcccac
     1141 gatgaacagc ggcacttcat tgggcagctg acgcttgtcg cgaacggtct ggaaggcgcc
     1201 gatgaattcg gtggagatcc ggccgaactg cccgatccat ttgagccggg tggagttggt
     1261 ccggttgcgc tgctcgtacc cgctggcgga gagctggaag ccgtcccggt tgttgcggtt
     1321 gagagtactg cgactgaact gatcgttgaa tccgttgacg tagttgtggg acacctccag
     1381 gtggtgattg tcggtcgcct cgtaggtcac cttggcgaag acattctggt tgggcgtcga
     1441 cagcaccggc tcgctggcgg tccccgggtc gaagccatac tgagtccgga tggcgttcgc
     1501 gacccggtcg gtgatcgcct gggtgatgcc gatggtcgga tcagtcaccg agttccccac
     1561 gaagggctga tcccgctgtt ggatgtcggc ggccacaaac aggtgcatcc ggtccttgat
     1621 gaacggcccg ctgatggtgc cgccaaactg ccgggtggtg aactcggcga acttgttccc
     1681 gaccgtgtcc ttgcccacca gatcgcgatt ctggaaatac ccgaacagcg agccggacca
     1741 ggcgttggtt cccgacttgg tcaccgcgtt caccagcccg ccggcgaacc cgccctggcg
     1801 gacgtcgaaa ggcgccacca gcacctggaa ttcctggatg gcttcgatcg acagcggctt
     1861 gacgttggac tgcccgcccg gggtgccttc cgcggccagg ccgaagagat cgttgttgac
     1921 gctgccgtcc accagaatgc tgttgaaacg attgttctga ccggcgatgc tggcgccgcc
     1981 ggacccggtg acctggacct gggggctgct ggcgagcagt gaggtgaaat tccggcccag
     2041 cagcggggag cggtggatgg cggtatcgga gacgatctgg gccggaccgg tccgggccga
     2101 gttgatcagc ggatcggtgg tcgcggtgat ctggagctcc tgcaagacta cgacctgggc
     2161 cttgagctga aagtcctgga ccgagcgctg gcccagcgtc agcacgatgc cggtcttggt
     2221 ggtctgctcg aagccgatgg cccggacctc gatgttgtat accccgggat cgacgttctc
     2281 gaaattgtag cgcccgctgg cttgcgagat ggcccgcagc cgggtgccct tatcggcgtt
     2341 gatcagggtg atcaccgcgc cttcgaccgc ggcgttccct tcctcgcggg tgatgcttcc
     2401 gcgcaacgcg gcagtggtga taccctgggc ggtgagaggc gcgctgccgc cgaccgcgag
     2461 cagaagcacc agagaaccga tgcctgcgaa acggaccaga accgacatgg tcgtcactcc
     2521 ggaagtggaa gagctgcgtc cgggaccgga tgcgggaggt actccacaag ctgtgcccga
     2581 acaacgactt cggataatgg ggccggaacc gccgcacccg acgggctggg cgtcgcgact
     2641 aagttatcgc cggggcaggg cgggtcaagc ggcgaaaaag tcacgactta gtaccggacg
     2701 gctggacggt cggatggtcg gacggtcgga cggtcggacg gacagtacta catgcacacc
     2761 gaattcaccg cccgcccgtc cgtccgtccg cctggccgtc cgctggccgg cccgaccgac
     2821 cgacccagat gaaatacacc gggattccgg ccaggatgat tgcgaacgtg atcccggtat
     2881 tcaccgggtc ggtaatcagg gcattcacga ccatcccggt ggcggccagg agaaacacaa
     2941 tcggaattac cggatacccc aacgcccggt aaggccgttc cgcgtccggc agccgtttcc
     3001 ggagccgaaa gatccctgcc acggccagga tgtagaaggg ccagatcccc agcacgaact
     3061 tgtccgccag ctgctgaaaa tcgttgaaca ggacgtaggt gacccccagc gccaccgcca
     3121 gccagatggc cgcggatggg ctctggaagc ggggggagac ccgggcgatc cattggaaga
     3181 acaggccacg gtccgccatg gcgtagaaga tccggggcga ggccatcatg gtgccgttga
     3241 cgctgctgaa ggtggagagc atgaccaccc ccgcgatcac cgatcctccc agggctccca
     3301 gcagcgggat tcgctcggcc gcggtggagg cgatcagacg ctgctgggcc atctccccga
     3361 tcggcaccat gtacaagtag gccgcgttca ccgatacgta tatcaggatg atcagcaggg
     3421 tcccggtgat cagcgcccgg gggagtaccc ggccgggatc gcgcacctca ccggccatgt
     3481 aggtcaggtc ggcccagccg tcgtaggccc acatgatcga gaccagcgcg gtgccgatcg
     3541 ccgaaatgtt gagggcggtg ctccagttgg tggtcgtgaa gttggccgag tcgcctcgct
     3601 cgctggtgaa ggcgagcagc accagtccca ccagcgcgcc gtacttggcg atggtggcga
     3661 tgttggtcac gaactcggcc cgcttgatcc cgatgtagtt gatggcgcca accacggtga
     3721 tgaccgcggc ggccacgtac tggacctgtc ggggcgtgag cggaacgaag taaccgaggt
     3781 attcggcgaa gatggtggaa atggctccca gggccgaggc ccggatcact gccagctggg
     3841 accagccgaa gaggaacgcc ggcagccgcc ccagcccttc ttcgagaaac gcaaagacgc
     3901 ccccgctgcg ggggaacatc gccgccagct cggccagggt gagggcgccg aacagcgcca
     3961 gcaccccccc tagcacccag gccagcatga agggacccgg ttccgtaacc cggcctgcca
     4021 cggtggcggg gacccggaag atgccgctcc cgatcgtgat cccgatcagt accgcgacgg
     4081 cgcccagcat gccgacggta cgcgggagtc gttcgccgta gctgtcccgt tgggtcattg
     4141 tcgacgctgg tcgaaggtgg tcgaaggact aggcggtaat cagatccatc tgaggggagg
     4201 ccggcgtcac caccggtcct tggtcccccc agtacatgtt gacttcgctc cggaccccga
     4261 agtcccccgg aagatagatc cccggctcca ccgagaatcc cacccccggc atcaacagac
     4321 gatcatcccg ggtttcgtag tcatcgatgt ggggccctga cccgtgcagg tcccgatcga
     4381 tcgagtgacc ggtgcggtgc acgaaaaagt ccccgaaccc ggctcgttcg atgacgctcc
     4441 gggcggcgtc atccacttca tagccccgga tcgactc
//
LOCUS       DASWKS010000111         3309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_48696, whole genome shotgun sequence.
ACCESSION   DASWKS010000111 DASWKS010000000
VERSION     DASWKS010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48696"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1817)
                     /locus_tag="VGA78_03480"
     CDS             complement(78..1817)
                     /locus_tag="VGA78_03480"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX9892955.1"
                     /translation="MTTQVTAGDFRTCPVTGLQVHRDAERLIRANAVAATVSLLIGGI
                     AAVLVLLTRWPAVHLLPAHWFYRILTVHGMSMLIFFILFFEMAILYFTSAVLLNSRVA
                     APRTAWGAFWLMVGGALVVEWAMWTGRADVLFSSYVPLRAHPLYYLGIILFAVGALVV
                     TILFFATLVVAKRERTYQGSVPLVTYGGATAAIISVITLGHGAGIYIPTFLWSLGLME
                     VDPQVYRMVWWALGHSSQQINVAAMVAVWYLLGALTVGAVVLNEKISRSAFALYILFI
                     SLASAHHLLVDPGMGPAWKIVNTSYFMYMAVLASLIHGFTVPAGIELGQRLRGFGDGL
                     FGWLRRAPWGDPGFSSLVFSIVVFGFVGGITGVTFGTEQINIIAHNTLRIPGHFHSTV
                     VSGTAMAFMGLTYYVIPLIFRKQVAFYPLARIQPYLFAGGMLVFSMTMTFAGTFGVPR
                     RHWDISFAQAPFDVQFNPAVDLLLGIMAVGGLVAATGGASYIVVTVWSVFFGKPLEAR
                     AGAVAGVPPGIVAPPRHLPDADRINEELHSPARGLWGPAPGTLALVAVFLLAFVIYYF
                     VNWKLLSFVWKVG"
     gene            complement(1814..2413)
                     /locus_tag="VGA78_03485"
     CDS             complement(1814..2413)
                     /locus_tag="VGA78_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892956.1"
                     /translation="METHTGMESPKGVWWKRAHPTERMWVAIAFGWCMVLFAMMPLWH
                     FKGGQNPAGVRYKVKPADYMRRTQEFIAAYKVGTDQGIPIVEPPAGSDIYLIGLSFAW
                     QPILKLQQGTEYTLHLSSLDVNHGFSLYPMNINFQVVPGYDYGLRVTPTEAGDLRIVC
                     NEFCGIGHHTMVGRVIVTDSAGREVAVADRAAIAREVAP"
     gene            complement(2421..2594)
                     /locus_tag="VGA78_03490"
     CDS             complement(2421..2594)
                     /locus_tag="VGA78_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892957.1"
                     /translation="MPPEQSSATDPAEPIPLGQRFLDNWPLLMVLGIVIMLVVFTGWG
                     LWEITSLKSAPLP"
     gene            2761..>3309
                     /locus_tag="VGA78_03495"
     CDS             2761..>3309
                     /locus_tag="VGA78_03495"
                     /inference="COORDINATES: protein motif:HMM:NF012263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX9892958.1"
                     /translation="MISLIQSLDAAARRVLVWLDAAMNRLYGWRGNPIYQSGALTVAL
                     LLLLIATGVYLTFFYRVGSPYESVGRITDQVWLGRWIRGLHRYASDAAVVAVALHAFR
                     VYAQGRRWGPRTLAWISGVVLFGLILVCGWTGYVMVWDTFGQVLAVEGARLLDLLPLF
                     AEPIGRAFTGERPLGGAFFFLNL"
BASE COUNT          579 a         1106 c         1107 g          517 t
ORIGIN      
        1 ccagccggcc gtgatcagca ggatcagcgc gagcgtgccg agcgcccatg tcgcacggcg
       61 ggtcatgaga ccgacgctca gcccactttc catacgaacg acagcagctt ccagttgacg
      121 aagtagtaga tcacgaacgc cagcaggaag acggccacca gcgcaagcgt gccgggtgcg
      181 gggccccaga gtccccgcgc cggcgagtgc agctcctcgt tgatccgatc cgcgtccggg
      241 aggtgccgcg gcggagccac gatgccaggc ggcactcccg ccacggcccc cgcccgcgcc
      301 tcgagcggct ttccgaagaa gaccgaccag accgtcacca cgatgtagct ggcgccgccc
      361 gtggcggcga cgagcccgcc gaccgccatg atcccgagga ggaggtccac cgccgggttg
      421 aactgcacgt cgaacggcgc ctgggcgaag ctgatgtccc agtgccgccg cggcacgccg
      481 aacgtccccg cgaaggtcat cgtcatcgag aagaccagca tcccgccggc gaagaggtag
      541 ggctggatcc gggcgagagg gtagaatgcg acctgcttcc ggaagatgag cgggatgacg
      601 tagtaggtga gccccatgaa cgccatcgcg gtcccgctca ccaccgtcga gtggaagtgc
      661 cccgggatcc ggagggtgtt gtgagcgatg atgttgatct gctcggtgcc gaaggtcacc
      721 ccggtgatcc cgcccacgaa gccgaacacc acgatggaga agaccagcga gctgaagccg
      781 ggatcacccc agggggcgcg gcggagccag ccgaagagcc cgtcaccgaa gccgcggagc
      841 cgttggccca gctcgattcc ggcggggacg gtgaagccgt ggatcaggct ggcgagcacc
      901 gccatgtaca tgaagtagct ggtgttgacg atcttccagg cagggcccat ccccgggtcc
      961 accaacaggt ggtgggccga cgccaacgag atgaagagga tgtagagcgc gaaggcgctg
     1021 cggctgatct tctcgttgag caccaccgcc cccaccgtga gtgcgccgag caggtaccag
     1081 accgccacca tcgcggcgac gttgatctgc tgcgacgagt ggcccagcgc ccaccacacc
     1141 atccggtaca cctgcgggtc cacctccatc aggccgagcg accagagaaa ggtcgggatg
     1201 tagatccccg ccccgtgccc cagcgtgatc accgagatga tggcggcggt ggcgccgccg
     1261 taggtgacca gcggcaccga cccctgatag gtgcgctccc gcttggccac caccagggtg
     1321 gcgaagaaga ggatcgtcac caccagcgcc ccgacggcga agaggatgat gccgaggtag
     1381 tagagcggat gcgcccggag cgggacgtag gagctgaaca gcacgtcggc ccgaccggtc
     1441 cacatcgccc actcgaccac gagagcgccg cccaccatca gccagaacgc gccccacgcc
     1501 gtccggggcg ccgccacccg gctgttcagc aggacggcgc tggtgaagta caggatcgcc
     1561 atctcgaaga acaggatgaa gaagatcagc atactcatcc cgtgcaccgt gaggatccgg
     1621 tagaaccagt gtgccgggag caggtgcacc gccggccagc gggtgaggag caccagcacc
     1681 gcggcgatcc cgccgatgag cagggagacc gtggcagcca ccgcattggc gcggatcagc
     1741 cgctcggcgt cgcggtggac ctggaggccg gtgactggac aggtccggaa gtccccggcc
     1801 gtcacctgcg tcgtcatggc gccacctccc gcgcaatcgc cgcccggtcg gcgaccgcga
     1861 cctcccggcc ggcgctgtcg gtgacgatca cccggcccac catcgtgtgg tggccgatgc
     1921 cgcagaattc gttgcagacg atccggaggt cgccggcctc tgtgggggtg acccgcaggc
     1981 catagtcgta gcccggcacc acctggaagt tgatgttcat cgggtagagg ctgaagccgt
     2041 ggttcacgtc cagcgaggag agatggaggg tgtactcggt tccctgctgg agcttgagaa
     2101 tcggctgcca ggcgaagctg agaccgatga ggtagatgtc gctcccggcc ggcggttcga
     2161 cgatcgggat cccctggtcg gtccccacct tgtaggcggc gatgaactcc tgggtccggc
     2221 gcatgtagtc ggccggcttc accttgtacc ggactccggc cgggttctgg ccgcccttga
     2281 agtgccagag cggcatcatg gcgaagagga ccatgcacca gccgaacgcg attgccaccc
     2341 acatgcgctc ggtggggtgg gcccgcttcc accagacgcc cttgggtgat tccatgccgg
     2401 tatgggtttc catggctccc tcagggaagt ggggccgact tcaggctcgt gatctcccag
     2461 agcccccagc cggtgaagac caccagcatg atgacgatgc cgaggaccat cagcaggggc
     2521 cagttgtcca agaaccgctg gcccagcggg ataggctcgg ccggatcggt ggcggaactc
     2581 tgctccggcg gcatcggcac ctcctcgctt cgagttggct cgcgcgtgcc ggcgggcgtc
     2641 ggtcacgtga cgcgagaagc gtaagcagcg atctagggac tgagacggga taatttcttc
     2701 ctattgttgc tattatcatc tcgacccgca agcgccccga cgcctgcact ccttgactta
     2761 atgatttctt taatccaatc gctcgatgcc gccgcgcgcc gcgtcctcgt ctggctcgac
     2821 gccgcgatga accggctcta cggatggcgt ggcaacccca tttaccagag cggcgcgctc
     2881 accgtggcgc tgttgctgct gctcatcgcc accggcgtct acctgacctt cttctatcgg
     2941 gtgggctcgc cctacgagtc tgtcggccga atcacggatc aggtctggct cggtcgttgg
     3001 attcgtgggc tccaccgcta cgccagcgac gcggcggtag tagcggtcgc gctccacgcc
     3061 ttccgggtct acgcccaggg ccgccgctgg gggccgcgga ctctggcctg gatctccggc
     3121 gtcgtgctct tcggactgat cctggtctgc ggctggaccg gctacgtgat ggtgtgggac
     3181 accttcggcc aggtgctcgc ggtcgagggc gcacggttgc tggacctgct gccgctcttc
     3241 gccgagccga tcggccgcgc cttcaccggc gagcggccac tcggcggggc cttcttcttc
     3301 ctcaatctc
//
LOCUS       DASWKS010000112         4789 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1904446, whole genome shotgun sequence.
ACCESSION   DASWKS010000112 DASWKS010000000
VERSION     DASWKS010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4789
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1904446"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(385..1554)
                     /locus_tag="VGA78_03500"
     CDS             complement(385..1554)
                     /locus_tag="VGA78_03500"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9892959.1"
                     /translation="MTTQQLIGMVLVAVPSVLFGYAYLGYPAILWLLTRRASWSPPAS
                     EPPEWPPITIVLPVYNEERVIRQTIESLLAVDYPAERKQVLVFSDASTDGTHAIVREY
                     ATRGVELVALPERRGKTAAENQSARHARGDVIINTDATTRILPHAIKPLVSVFQDPTV
                     GVASGRDLSSAAGAVEDTMAESGYVGYEMWVRDLETRFGSIVGASGCFMAVRRTLFDQ
                     LFPEALSRDFASPLLARAAGYRAVSVPAATALVPRARALGVEYRRKTRTMARGLETLW
                     YLRQLLNPLRYGGFAWMLWSHKAARWFGFLMAPLGLVGLVLLAPASIIARALLSIAGA
                     GLACGLAAFVWPPDRKIPKVIAAAGYLLGGAAAAIAAWGRALRGERNPIWEPTRR"
     gene            complement(1558..2673)
                     /locus_tag="VGA78_03505"
     CDS             complement(1558..2673)
                     /locus_tag="VGA78_03505"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9892960.1"
                     /translation="MDIVQMLAPGPFGGLERVVAQLCGGLSSRGHSVVAALLVEEEQT
                     EEPGLVAALLGSGAAVELIRAPHRAYRRERALVRQLLSSSRPDLMHTHGYHADVLLRS
                     VGQQVGLPVAATVHGFTGGGFKNRLFEGLQRRSLRRMDATVAVSRALADRLARSGVPE
                     QRLHVVRNAYSSPGELLSRDEARSRLGLDPTAQVVGWVGRVTPEKGPDVMVEALGQLR
                     TPGVELSIVGRGRLEATLKQRVVQLGLAGMVHWHGAVPDAWRLFRAFDAYCLSSHTEG
                     TPIALFEAMAAAVPVVATEVGGVPDVVSVREAFLTPPGDAAALAAALDQALAEGRGAR
                     VVAASERLTREFGLDPWLDRYETIYRSITRVRDSQPR"
     gene            2709..3359
                     /locus_tag="VGA78_03510"
     CDS             2709..3359
                     /locus_tag="VGA78_03510"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HEX9892961.1"
                     /translation="MAEPSTPLAKSLLRRALPESLLRAIRVYRGLDPAARASLPRVWL
                     KRLFAGRQALPTLPPAPRVLFVCRGNILRSAMAEAVFQDLAVRGNGRSRCSVTSAGTA
                     AADGNPADPRGLRVARELGVDLSAHRARLLTQPAVDQADLILVMDYLNEAEVVGQFAG
                     AAPKVRLLGAFSSPNSRPHEIKDPYSGTEEDVRKAFETISKAVRHLVSTLSLAPDR"
     gene            complement(3405..4442)
                     /locus_tag="VGA78_03515"
     CDS             complement(3405..4442)
                     /locus_tag="VGA78_03515"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9892962.1"
                     /translation="MKVLVTGHGGYLGSVLVPLLQSAGHQVTGLDTFLFEGCTFGGPA
                     PQVPALRMDLRDVEPHHLRGFDAVIHLAALCNDPLGNLSPETTYAINHLASVRLARAA
                     KAAGVRRWLFASSCSLYGVAGDDLLTEEAPFNPLTPYGESKILTERDVRSLADDGFSP
                     TYLRNATAYGVSPHLRGDVVVNNLVAHAVVTGDVLIQSDGSPWRPLVHAEDIGRAFLA
                     VLHAPRELIHNQAFNVGRNEDNLRVREVADMVQAVVAGSRIRYAEGGGPDPRCYRVDC
                     RKLARTVPEFQPQWTVQLGVEQLYRAYREARIDGQFFDRYLRIKQIQQLQAQGRLDER
                     LRWRAPAAIGT"
     gene            complement(4439..>4789)
                     /locus_tag="VGA78_03520"
     CDS             complement(4439..>4789)
                     /locus_tag="VGA78_03520"
                     /inference="COORDINATES: protein motif:HMM:NF027546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX9892963.1"
                     /translation="VEILEVNASYLNLSPRGEPQLGRRGLYHATGGEAIPRDSQMALL
                     WVLSFSDGRHSLLDIAQRAGLPFSIIREAATALERTGLLRPISGTESADFVPPRLDAT
                     AAAEAARTPSGGSG"
BASE COUNT          842 a         1660 c         1546 g          741 t
ORIGIN      
        1 ggcggacgtg ttatcccaga accacccagc agcccggccg gcgttggacg gcgtaatggg
       61 gttcacgaat gctcccccgc cacccaggtc gagcacctgc gcggacaggg ccgggggcag
      121 ggcagccaga gccaggaaat agccgagggc cttgatgttc cgcacggggt ctcctgatgt
      181 ggagcacata aatcccttac tgcgcccccg aaaccgcaag caatatgccg tcgattagtt
      241 ccacgacacc ggtcgataac ctactgtccg taaagagctt gaggaagctc catgctgcca
      301 tggcgaccag aactttggca gtgaaactgt ggcccggtgc cgccgccgtt gcgcgtcacc
      361 cacaaatctt gagtcgggcg gaattcagcg gcgggtgggc tcccagatgg ggttgcgctc
      421 ccctcgtaag gccctgcccc acgccgcgat cgccgccgcc gccccaccca ggaggtatcc
      481 ggccgcggcg atcactttgg gaatcttgcg atcgggcggc cagacaaagg cggcgagtcc
      541 gcacgccagc ccggccccgg caatcgacag cagcgcgcgg gcgatgatgg acgctggtgc
      601 caagagcacc agccccacca accccagagg ggccatcagg aatccgaacc aacgggcggc
      661 tttgtggctc cacagcatcc aggcgaagcc gccatagcgc aacggattca acaactgccg
      721 caggtaccag agcgtctcga gcccccgggc catggtgcgg gtcttccgcc ggtattcaac
      781 cccgagcgcc cgggcccgcg gcaccagagc ggttgcggcc ggaaccgaca ccgctcggta
      841 cccggcggcc cgcgccagca gcggtgaggc gaagtctcgg ctcagggctt cgggaaacag
      901 ctggtcgaag agggtgcgcc gcacggccat gaagcagcca ctggccccca cgatcgaccc
      961 gaaccgggtt tccagatcgc ggacccacat ttcgtacccg acgtaacccg actccgccat
     1021 ggtgtcctcc accgcgccgg cggcggagct cagatcccgt cctgaggcga cacccacagt
     1081 ggggtcctga aacacgctca ccaggggttt gatcgcgtgg ggaagaatcc gggtcgtggc
     1141 gtcggtgttg ataatgacat cgccccgggc gtgacgggcc gactggttct cggccgcggt
     1201 ttttccccgc cgctccggca gcgccacgag ctcgacaccg cgagtcgcgt attcacgaac
     1261 gatggcgtgg gtgccatcgg tgctggcgtc ggagaacacc aggacctgtt tccgctccgc
     1321 gggatagtcg accgcaagca gagactcgat cgtctgccgg atcacgcgct cctcgttgta
     1381 caccgggagc acgatggtaa tcgggggcca ctcggggggc tcactcgcag gcggcgacca
     1441 cgaggctctc cgcgtcagta gccagaggat ggcgggatac ccgaggtagg catacccgaa
     1501 caggaccgac ggcacagcca ccagcaccat cccgatcagt tgctgagtcg tcacacatta
     1561 cctcggttga gagtcccgaa ctctggttat cgaccggtaa atcgtctcat accggtccaa
     1621 ccagggatcg agtccgaatt cccgggtcag tcgctcgctg gcggccacca cccgggcgcc
     1681 ccggccctcg gcgagggcct ggtccagcgc cgcggcgagc gcggcggcat cgccgggtgg
     1741 cgtcaagaac gcttcccgca ccgataccac atccggcaca ccgcccacct cggtggccac
     1801 gaccgggact gccgcggcca tggcttcgaa caacgcgatg ggggtgcctt cggtgtgaga
     1861 cgaaagacag taagcatcga aggctcggaa caatcgccac gcgtccggga cggcgccgtg
     1921 ccagtgcacc atcccggcca gtcctagctg caccactcgc tgcttcagcg tcgcctcgag
     1981 ccggccccga ccgacgatgg acagctcaac gcctggtgtg cggagctgcc ccaaggcttc
     2041 caccatgacg tcgggtccct tttcgggcgt cactctccca acccacccga ccacctgggc
     2101 ggtcggatcg aggcccagcc gggaacgggc ttcatctcgt gagagcaact cgcccggcga
     2161 cgaatacgcg ttgcggacga catgcagccg ctgctccgga accccggagc gggccagccg
     2221 gtccgccaac gccctcgaca cggcaacggt tgcatccatc cggcggagcg agcgccgctg
     2281 gagcccctcg aagagccggt tcttgaaccc gcctccagtg aacccgtgga ccgtggcggc
     2341 cacggggagg ccgacttgct gccccaccga ccggagcaga acatcggcat gataaccgtg
     2401 ggtgtgcatc agatccggtc gggaggacga aagcagctgc cgtaccagcg cccgctcacg
     2461 gcggtaggca cggtgggggg cccggatcaa ctcaactgcc gctcctgacc ccagcagcgc
     2521 tgcaaccagg cccggctcct cggtctgctc ctcctccacc aggagtgccg ccactacgga
     2581 atgcccccgg ctggacaagc cgccgcagag ctgggcgacc acccgttcga gcccgccgaa
     2641 cggcccggga gccagcattt gaacgatatc catgctgcga agcggcgctc cctgtgtaac
     2701 ttgatattat ggcggaacct tccacgcctc tggccaagtc gctgctccgt cgggcgctcc
     2761 ctgagtcgct cctgcgggcc atccgcgtct accgggggct ggaccctgcg gcccgcgcgt
     2821 ccctgccacg ggtctggctc aagcggctgt tcgccgggcg acaagctctg cccacccttc
     2881 cccccgcccc acgggtgctc tttgtctgcc ggggaaacat ccttcgcagc gccatggccg
     2941 aggccgtgtt ccaggacctc gcggttcgag gcaacggacg ctcgcgctgc agcgtgacct
     3001 cagccgggac tgcggcggcc gatggcaacc cggccgaccc gaggggcctc agggtagccc
     3061 gcgagctggg ggtggatctt tcagcccacc gcgcgcgtct gctcacccag cccgcggtgg
     3121 atcaggcgga cttgatcctg gtcatggact acctcaacga ggcggaggtc gtggggcagt
     3181 tcgctggtgc tgctcccaag gtccgcctgc tcggcgcctt cagctctccc aactcccggc
     3241 cccatgagat caaggacccg tattcgggaa ccgaggagga tgtccggaag gcgttcgaaa
     3301 ccatttcgaa ggccgtgcgt catctcgtct cgaccctcag tctggctcct gaccggtgag
     3361 agtggtttag aacctccttc atccttcgct ccggatcgct ggcctcaggt cccaatggcc
     3421 gccggggcgc gccagcgcag ccgctcatcc agtcgcccct gtgcctgcag ctgctggatc
     3481 tgcttgatgc ggagataccg gtcaaagaac tgtccgtcga ttcgggcctc ccgatacgcc
     3541 cggtagagct gctccacgcc gagctggacc gtccattgcg gctggaattc cggtaccgtg
     3601 cgcgcgagct tgcggcagtc gacccggtag caacgcggat cagggccccc gccttccgcg
     3661 tatcgaatcc ggctgccggc gactaccgcc tgaaccatgt cggccacctc ccggacccgc
     3721 agattgtcct cgttccgccc gacgttgaac gcctgattgt gaatcagctc ccgcggggcg
     3781 tggagcacgg ccaggaaggc gcgcccgatg tcctcggcgt gaaccagcgg gcgccagggc
     3841 gacccgtcac tctgaatgag cacgtccccg gtgaccaccg cgtgggccac caggttgttg
     3901 accacgacat caccgcgcag gtggggcgac accccgtagg ccgtcgcgtt tctcagatag
     3961 gttgggctga atccatcgtc tgccagggag cggacatcgc gctccgtcag aatcttcgac
     4021 tcaccgtaag gggtaagggg attgaagggc gcctcctccg tgagcaggtc atcccctgcc
     4081 acgccataga ggctgcagga cgaggcgaac aaccagcgcc ggaccccggc ggccttggcg
     4141 gctcgggcga gccgcacgct ggcaaggtgg ttgatggcgt aggtggtttc ggggctgagg
     4201 ttgccgagcg gatcgttaca caaggcggcg agatggatca ccgcgtcaaa gccccgcaag
     4261 tggtggggct ctacatcgcg cagatccatc cggagggcgg gcacctgagg cgccgggccc
     4321 ccgaaggtgc aaccctcgaa aaggaacgta tcgagaccag ttacctggtg cccggcgctc
     4381 tgcagcagcg ggacgaggac cgatccgagg tatccgccat ggccggtgac caggaccttc
     4441 atccactgcc tcctgacggg gtccgcgccg cttccgctgc cgccgtggca tcgagacgag
     4501 gcgggacgaa atcggcagat tccgtgccgg agattggccg aaggagaccg gtgcgctcga
     4561 gcgcagtcgc agcttctcgg atgatcgaga agggcaggcc cgcgcgctgg gcgatatcga
     4621 gcagcgagtg ccggccatcc gagaagctca ggacccaaag cagcgccatc tgcgaatccc
     4681 tcgggatcgc ctcgccaccc gttgcgtgat agaggccgcg acgtccgagc tgtggttcgc
     4741 cccgagggct cagattcagg taggaggcgt tcacctccag gatctcgac
//
LOCUS       DASWKS010000113         8054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2274187, whole genome shotgun sequence.
ACCESSION   DASWKS010000113 DASWKS010000000
VERSION     DASWKS010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2274187"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VGA78_03525"
     CDS             complement(<1..666)
                     /locus_tag="VGA78_03525"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9892964.1"
                     /translation="MKGTATRSASRQVARELTLDVPAEAVWKALTDAAELTRWFPLEA
                     RVRPGSGGAIWMKWEGVYEAESPIEAWEPGRHLRTVFPLHEPVRLSTDYYLESDKGRT
                     VLRVVTSGFGEGTDWDEWFAGVNTGWDFELRSLKHYLERHQGTDRVALSVRASYRSST
                     ADAWNRLAGIGAWLSFDEVSVAGSRYRARTQTGEELTGMVEQWLPPRQVVLTVDQYND
                     GIMR"
     gene            complement(663..1265)
                     /locus_tag="VGA78_03530"
     CDS             complement(663..1265)
                     /locus_tag="VGA78_03530"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9892965.1"
                     /translation="MKLASPLSVIDDPRRASLALDPIRLRLLQELAQPDSAVGLARRL
                     GLPRQKINYHLRLLEEQGLVELVEERRRRNCTERVVRAVAHSYLINPAALGALAADPS
                     RVSDRTSSTYLIATAAQVIRDVASLRDQADTAGKKLPTLTLQVDIRFASPADQQAFAQ
                     ELSEDVARLTAKYHDDQAAGGRRFRFISGAYPAPAQEEQS"
     gene            complement(1373..4021)
                     /locus_tag="VGA78_03535"
     CDS             complement(1373..4021)
                     /locus_tag="VGA78_03535"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9892966.1"
                     /translation="MAEIIERLTPHLADRYRLLRVAARGGASVIVYAEDIRHDRPVAV
                     KVMSGEFTAIAGADRFQREIGILARLQHPNILPLIDSGTADGLLYYVMPFVQGESLRQ
                     RLLAEGRLTLQEALRLLLEVCDALQYAHEQGLVHRDIKPENILIASRHALVADFGVAR
                     AMNAPQSGNQTTAGIAIGTPAYMAPEQAAADPNTDHRADIYALGVVAYEMLAGRPPFE
                     GDQAALILAAHVTQPAPPLSLHRPDLPPGLEQVIMRCLAKRPSERWESAGALRDALEP
                     FLLPSGALTPVGTSPVSRATRWRRGLLVGLGAVALTAGLAALWLRGGSGPTVQLGDPH
                     RLRVTGDLELDPVLSPDGRALAYAAGQNGSMRITVRQLPDGDTIVIARGVPGNQRWPR
                     WSPDGSRILFQAGAAIYTVPAFSGTAEAVVEGTTRAPPGGFDWSPEGNSIAYVMDGAV
                     WVRAADGASPAREVVRDVQAHSVVWSPGGKWLAYVRGNADFVFSETFLGNVAPSQLML
                     VSAEGGTPIPLTDGKSLALSPAWIDERTLAFVQARGGIRDVYRLRINGRGQPVGDQVR
                     ITTGLDPHGIVITPDRRTLSYAVLSHTSNVWALTVPTRGVALMRDARRVTSGRQLVED
                     LDVLPSDRFMLYDSNVDGSQDIWLVNLKSRQPVQLTRDSTEEFGPAWSPTGEEIAFYG
                     VRDGVRQVFVMRDNGKGARQITSDTLQNHQPRWSPDGQHLVFNRTTGPGLSHLYIVSR
                     NPDSSWGQPRRVTEDPGAEPNWSPDGRWIAFADPDGQIRIVPPEGGSSQVVATPAQTG
                     GLRLKRPLWLLDQPALLARAEAAGGQGGIWLIPIGGEAPRQVARFDDPQRPVYRNDFS
                     SAGENLYFIVTELSSSLWTAALVAGR"
     gene            4210..5223
                     /locus_tag="VGA78_03540"
     CDS             4210..5223
                     /locus_tag="VGA78_03540"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX9892967.1"
                     /translation="MRVLILGGTRNLGHDLVLHLLASGHAVSVLNRGRTPDTLPATVD
                     RLRADRSAPGELREAVGRRRWDVVVDLTLYNGPDAEAAIELFSGRVEHYLFISTGQVY
                     LVRTAAPRPAREEDYAGPVLAEPVAGSRDHANWVYGVEKRAAEDALARAGKESEFPVT
                     ALRLPMVNSRRDHYGRLHGYILRLQDGGPILVPDGPGLSLRHVYGDDVVRVIGLLLES
                     GTGKGEAFNLAQDETVSLEEFLGLVSQAIPGQRGRLRLTRAPLARLEERHLFPACSPF
                     SDTWMSALDNRKSKAALGFNYTPLAVYLPQLVRHYLDTRPAAPAGYEQRPQELELAEA
                     GRP"
     gene            5468..5593
                     /locus_tag="VGA78_03545"
     CDS             5468..5593
                     /locus_tag="VGA78_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892968.1"
                     /translation="MRWYRARKQGLGALRGYLEREWRGRLTRLKELAEAEESRHG"
     gene            5586..6359
                     /locus_tag="VGA78_03550"
     CDS             5586..6359
                     /locus_tag="VGA78_03550"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9892969.1"
                     /translation="MADPIVLELEILIRATPATVYRFLSDPARFRAWMGEGAELGDAV
                     GAPIRVAYPNGESAEGHIVARIPDRRLVFSDGYAGNPELAPGSTTVTIDLIGEGSATR
                     VVLRHDGLPSDSARTGHELGWTHYLSRLRGVATAEEMLPIARLAVAAWIAAWGETDPV
                     RRAELIADCWEDGSLFADHLGIAEGPAGLGGYIAGAQQFLPGSRLELRGPVEVVLDRV
                     RFQWAGILADGTVIGAGVNFGELSPGGRYARMTGWWNRP"
     gene            6382..6960
                     /gene="pnuC"
                     /locus_tag="VGA78_03555"
     CDS             6382..6960
                     /gene="pnuC"
                     /locus_tag="VGA78_03555"
                     /inference="COORDINATES: protein motif:HMM:TIGR01528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015663 - nicotinamide mononucleotide
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015890 - nicotinamide mononucleotide
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HEX9892970.1"
                     /translation="MEVVAVLFGIVSVWLSVRQNIWSWPTAIINVSLYFVIFYRERLY
                     ADMGLQVFYAAISVYGWYHWLFGGVDRTELKVSLTPRWLWPVLLVIWAAGSGLLGTLL
                     FQNTDAALPYIDSLLTVGSLLAQWMMTRKYVENWAIWVTLDVAYVIVFLNRGLPLTAF
                     LYFVYLLLAWRGFLEWRRSYQSTAPAVSPLPQ"
     gene            7071..7880
                     /locus_tag="VGA78_03560"
     CDS             7071..7880
                     /locus_tag="VGA78_03560"
                     /inference="COORDINATES: protein motif:HMM:NF012392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9892971.1"
                     /translation="MILRLEPPPEAGHDLNGLLLEETSYGVASVGAPPSPSVTMVLEG
                     LLVEADEPEVTPVPPLAVVIRSEDGRNLKRRSGVSGLTRCFEIRLGGAWATRMRECGL
                     DGRPALYVSAGRINTLVGQIHVEAVRPGLASAMAIGGLTLTLLAELRRVISTEAPSRP
                     MPGWLRRAVGLVHQRYREPLHMGELAREVGVHPVHLSRAFRRAFGVTMTEYVRDLRIH
                     VAAEALVSGPEPLPRIARSVGYHNLGHFTRSFKRATGMTPGAYRGRGRRAG"
BASE COUNT         1253 a         2638 c         2810 g         1353 t
ORIGIN      
        1 ccgcatgata ccgtcgttgt actggtccac cgtgagcacc acctgccggg gtgggagcca
       61 ctgttccacc atgccggtga gttcttcgcc ggtctgggtc cgagcccgat agcgggaccc
      121 ggcgacggag acttcgtcaa acgacagcca ggccccaata ccggccaggc ggttccaggc
      181 atcggccgtg ctggagcgat aggaggcacg gaccgagaga gctacccggt cggtcccctg
      241 atggcgctcg aggtagtgct tgaggcttct cagctcgaaa tcccaccctg tgttgacccc
      301 ggcgaaccat tcatcccagt cggtgccttc gccgaacccc gacgtcacca cccgaagcac
      361 cgtccgaccc ttgtcgcttt ccaggtagta gtcggtggac aggcggaccg gctcgtgcag
      421 gggaaagaca gtgcgcaggt gacggccggg ttcccacgcc tcgatgggcg actcggcttc
      481 gtacacgcct tcccatttca tccagatggc cccgccggaa ccgggccgca cccgcgcttc
      541 gagcgggaac cagcgggtca attcggcggc gtcggtcagg gccttccaga cggcttcggc
      601 cggaacgtcg agcgtcagct cgcgggcgac ctggcgggat gcggatcggg ttgctgtgcc
      661 tttcatgatt gctcctcctg ggcgggcgcg ggatacgcgc cactgatgaa gcggaagcgg
      721 cggcctccgg ccgcctggtc gtcgtggtac ttggccgtca gccgggctac gtcctccgac
      781 agctcctggg cgaaggcctg ctggtctgcc ggactggcga agcggatgtc gacctggagg
      841 gtgagggtcg ggagcttctt cccggccgtg tccgcctgat cccgcagaga cgccacatcg
      901 cgaatgacct gggcggcggt ggcgatcagg taggtactcg aggtgcgatc gctgacccgg
      961 gaagggtccg ccgccagcgc ccccagcgcg gcagggttga tgaggtagga gtgggccacc
     1021 gcgcggacca cccgctcggt gcagttgcgc cgcctgcgct cttcgaccag ctccaccagg
     1081 ccctgctcct ccagcaaccg aaggtggtag ttgatcttct ggcgaggcag tccgaggcgg
     1141 cgggccaggc cgaccgcaga gtcgggctgg gccaattcct ggaggaggcg gagccggatg
     1201 ggatccagcg ccagggacgc gcgccgagga tcatcgatta cagagagcgg actcgcgagt
     1261 ttcatgaagc tcaggatagt ctagacaaat atatttgtca agaggccggc gccgcagacg
     1321 ctcgaatgtc gcctcactgt tgcaatgatg tcgtcatagt ggcgttgaag cactaccggc
     1381 cagcgaccaa agctgcagtc cacaggctgc tcgacagctc ggtcacgatg aaatacaagt
     1441 tctcgccggc gctggaaaaa tcgttgcggt agaccgggcg ttggggatcg tcgaaccggg
     1501 cgacctggcg aggcgcctca ccgccgatgg ggatcagcca gatgccgccc tggcctccgg
     1561 cggcctcggc tcgagccaac agggcgggtt gatccagcag ccagagcggc cgcttgaggc
     1621 gcaacccgcc agtctgtgcc ggagtggcca ccacttgaga ggagccaccc tcgggcggga
     1681 cgatccggat ctgcccatcg gggtcggcga aggcgatcca gcgaccgtcg ggcgaccagt
     1741 tgggttcggc gccgggatcc tcggtcaccc ggcggggctg accccaggac gaatcggggt
     1801 tgcgcgacac gatgtagagg tgactgaggc cggggccggt ggtgcggttg aacaccaggt
     1861 gctggccgtc gggagaccag cgcggttggt gattctgcag ggtgtcggag gtgatctggc
     1921 gcgcgccctt cccattgtcg cgcatcacga agacctgccg aacaccgtcg cgcaccccgt
     1981 agaacgctat ttcttccccg gtgggggacc aggccgggcc gaattcctcg gtcgaatcgc
     2041 gggtgagttg caccggctgc ctcgacttca gattgaccag ccagatgtcc tgactgccgt
     2101 ccacattcga gtcgtagagc atgaaccggt cgctgggcag cacatcgagg tcctccacca
     2161 gctgccggcc gctggtcacc ctgcgagcgt cgcgcatgag tgctaccccc cgggtgggga
     2221 cggtcagggc ccacacgttc gaggtgtgcg acagcaccgc gtatgacaag gttcgccggt
     2281 ccggggtgat gacgatgccg tgaggatcga gaccggtcgt gatgcgcact tgatcgccga
     2341 ccggctgtcc ccggccgttg atccttagcc ggtagacgtc gcggatcccg ccccgcgctt
     2401 gcacgaaggc cagggtccgc tcatcgatcc aggccggact caacgcgagg ctcttgccgt
     2461 cggtgagcgg gatgggggtg ccgccctcgg ccgagaccag catgagctgc gaaggcgcga
     2521 cgttgccgag aaaggtctcg ctgaacacga aatcggcgtt gccgcgcacg taggccagcc
     2581 acttgcctcc cggtgaccag accaccgagt gggcctggac gtcgcggacg acttcccggg
     2641 ccggagacgc tccatccgcg gcccggaccc agacagcgcc atccatcacg taggcgatgc
     2701 tgttcccctc cggtgaccag tcgaacccgc cggggggcgc gcgggtggtg ccctcgacca
     2761 ccgcctcagc cgtgccgctg aaggccggca cggtgtagat cgccgcgccg gcctgaaaca
     2821 ggatccggct tccgtcgggg ctccagcgcg gccagcgctg attccccgga acgccccgcg
     2881 cgatgacgat ggtatcgccg tccggcagct gcctgaccgt aatgcgcatc gagccgttct
     2941 ggcccgccgc gtaggccagg gcccggccgt cgggggacag caccgggtcg agctccagat
     3001 cgccggtcac tcggagccgg tgggggtcgc ccagctgcac agtcggcccc gacccgcccc
     3061 ggagccagag ggccgcgagc cccgcggtca gggccaccgc cccgagtccg accagcagcc
     3121 ccctccgcca ccgggtcgcc cgcgaaaccg gggacgtccc caccggagtc agcgcaccgc
     3181 tcggcagcag gaatggctcg agcgcgtccc gcagcgcccc cgcgctctcc caccgctcgg
     3241 acggccgttt ggccaggcag cgcatgatca cctgctcgag gccgggcggg aggtcgggcc
     3301 ggtggagcga gagcgggggc gccggctggg tgacgtgggc cgctagaatc aacgccgcct
     3361 gatcgccttc aaacgggggc cggccggcca gcatctcgta cgccaccacg cccagcgcgt
     3421 aaatgtcggc gcgatgatcg gtattgggat cggccgcggc ctgctccggc gccatgtacg
     3481 ccggggtgcc gatcgcgatg ccggcggtgg tctggttgcc gctttggggc gcgttcatgg
     3541 cgcgtgccac gccaaagtcg gccaccagtg cgtgacggct ggcgatcagg atgttctcgg
     3601 gtttgatgtc gcgatggacc aggccctgtt cgtgggcgta ctgcagggcg tcacacacct
     3661 ccagcagcag gcgcagggcc tcctgaaggg tgagccggcc ttccgccagc aaccgctgcc
     3721 gcagcgactc gccctggacg aagggcatga catagtacag cagcccgtcg gcggtgcccg
     3781 agtcgatcag cggcagaata ttgggatgct gcaggcgggc gaggatcccg atctcgcgct
     3841 ggaagcgatc ggctcccgcg atggcggtga attccccgct catcaccttc accgccaccg
     3901 ggcgatcgtg gcgtatgtcc tcggcgtaga cgatcaccga ggcgccaccg cgcgcggcca
     3961 cgcgcaggag gcggtaccgg tcggcgagat ggggcgtcag gcgttcaatg atctcggcca
     4021 tgccggtacg gctcccgcgg tcaggattat tggacgcgcc cgaggttaaa accgttgccg
     4081 tagaaggcag ggtttaaccc gacgatccgc cgccgggcga cgtttcacaa gatggagccc
     4141 tggacctcga gtcgtaagcc gccaggggtt tgcggctagc tttccgctgg cttgctcgag
     4201 tgaggcgtga tgcgcgtgct gatcctggga ggaacccgga acctggggca cgacctggtg
     4261 ctgcatctgc tggcctcggg acacgcggtc agcgtgctca accggggccg cacccccgac
     4321 accttgccgg caacggtcga ccggctgcgg gccgaccgct cggcgccggg cgagctgagg
     4381 gaggccgtgg gccggcgacg ctgggatgtg gtggtggatc tcacgctgta caacggtccc
     4441 gatgccgagg ctgccatcga gctcttctca ggacgagtcg agcactatct cttcatcagc
     4501 accggccagg tgtacctggt tcgcacggcc gcgccccgac cggcccgcga ggaggactat
     4561 gccgggccgg tgctggcgga acccgtggcc gggtcccggg atcacgccaa ttgggtctac
     4621 ggagtcgaga agcgcgcggc ggaggatgcg ctggcccggg ccgggaagga gtcggagttt
     4681 cccgttaccg cgctccggtt gccgatggtc aacagccggc gcgatcacta cgggcggttg
     4741 cacggctaca tcctgcggct gcaggacggc ggtccgatcc tggtgcccga cggtcccggc
     4801 ctctccctgc gacatgttta cggggacgat gtggtgcggg tgatcgggct gctgctggag
     4861 agcggtaccg gcaaaggtga agcgttcaat ctggcgcagg acgagaccgt gtcgctggag
     4921 gagtttctcg ggctggtgag tcaggcgatc ccggggcagc gcgggcggct gcgcctcacc
     4981 cgggccccgt tggcgcggct ggaagagcgc catctgttcc ccgcctgctc gccgttcagc
     5041 gacacctgga tgtcggcgct cgacaaccgc aagagcaagg cggctctcgg cttcaactac
     5101 acgcccctcg ccgtgtacct gccgcagctg gtgcggcatt acctcgatac caggccagcc
     5161 gcgcccgccg gctacgagca acgcccgcaa gagctcgagc tggccgaggc tggccgtccc
     5221 tgagccgcgg ggggcctcga agtagcggac atccggttcc gcgatcgaaa aactatccgc
     5281 agatgacgcg gatggcgcag ataactgcac caatcaaaac gcccaaaaac acctaacgtg
     5341 tcattgttcc caaagcgttt gttttttatc tgcgccatcc gcgttatctg cggatgattc
     5401 tcgatcagga atcagagcac cttctcacga ctcgtgaccc tcaaggtgct ccgcgacgcc
     5461 gggccgagtg cgctggtacc gggcccggaa acagggactc ggcgcgctgc gcggatacct
     5521 ggagcgggag tggcggggca ggctcacccg gctcaaagaa ctggccgaag cggaggagtc
     5581 gcgtcatggc tgatcccatt gtgctcgagc tcgagatcct gatccgggca accccggcaa
     5641 ctgtctaccg ctttctgagt gatccggcgc ggttccgggc ctggatgggc gagggggccg
     5701 agctgggtga cgcggtcggg gccccgatcc gggtggcgta tccgaacggc gaatcagccg
     5761 agggtcacat cgtggcgcga atcccggatc gccggctggt gttcagcgac ggttacgctg
     5821 gcaatcccga gctggcgccc ggatccacca cggtgaccat cgatctcatc ggcgagggct
     5881 ccgcaacccg cgtggtgctg cggcatgacg gacttccgag cgactccgct cgcaccggcc
     5941 acgagctggg ctggacccac tatctctccc ggctgcgcgg ggtggcgacc gccgaggaga
     6001 tgttgccgat cgcccggctg gcggtcgccg cctggatcgc ggcctggggc gaaaccgatc
     6061 cagtccggcg ggccgagctc atcgccgact gctgggagga tggctccctc ttcgcggatc
     6121 atctgggcat agccgaaggg ccggccgggc tgggcgggta cattgctggc gcgcagcagt
     6181 tcctgccggg ctcgcgtctg gagctgaggg ggccggtgga ggtggtgctc gatcgggtgc
     6241 ggttccagtg ggccggcatt ctggccgatg ggaccgtgat cggcgccgga gtgaatttcg
     6301 gtgaactgtc gcccggcggg cgctacgccc ggatgacggg atggtggaat cgcccttgaa
     6361 gggggggtcg gcctgagtcc cctggaagtc gtcgcggtcc tgttcggcat cgtcagcgtc
     6421 tggctcagcg tccggcagaa tatctggagc tggcccacgg cgatcatcaa cgtatccctc
     6481 tacttcgtca tcttctatcg ggaacggttg tacgccgata tggggctgca ggtgttctac
     6541 gcggccattt cggtgtatgg ctggtatcac tggctcttcg gcggcgtgga tcggaccgag
     6601 cttaaagtct cgctgacgcc gcgatggttg tggccggtgt tgctggtgat ctgggcggcc
     6661 ggctccggtc tgctggggac cctgctcttc cagaacaccg atgcggcgct gccctacatc
     6721 gactcattgc tcacggtggg aagcctgttg gcgcagtgga tgatgacgcg gaagtacgtc
     6781 gagaactggg ccatctgggt cacccttgat gtggcgtacg tcatcgtgtt tctcaaccga
     6841 ggcctgccgc tgacggcctt cctctacttc gtgtatctgc tcctggcctg gcggggcttt
     6901 ctggagtggc gccgatcgta ccagtcgacg gccccagcag tttcgccgct tccgcagtag
     6961 ttcctccctg aatcgcaacg attcacgccc tccgagcgtc gtatgggaat aacgtcgtgc
     7021 gtgacagccg gcgttcaccg cgtgaaacgt ccgcccgctt gtgaggcagc gtgattctaa
     7081 gactcgagcc gcctcctgaa gcgggacacg atctgaacgg cttgttgctg gaggagacct
     7141 cctacggcgt cgccagtgtc ggggcgccac cgtccccgtc cgtgaccatg gtgctggaag
     7201 gcctgctggt ggaggccgac gagccggaag tgacgccggt gccccccctg gcggtggtga
     7261 ttcgctccga ggacggcaga aacctcaagc gccgcagcgg cgtgtccggg ttgacccggt
     7321 gtttcgagat ccggttaggc ggcgcctggg cgacccgaat gcgggagtgc gggttggatg
     7381 ggcgcccggc cctgtacgtc agcgcgggtc ggatcaacac cctggtgggc cagattcacg
     7441 tggaagcggt gcgaccgggc ctggcctcgg cgatggccat cggcggactc accctcaccc
     7501 tcctggccga gctgcgccgg gtcatttcga cggaggcccc gtcccggccg atgcccggct
     7561 ggctgcggcg ggcggtcggg ctggtccacc aacggtaccg ggaaccgctt cacatgggtg
     7621 agctggcccg ggaggtcggg gtccatccgg tgcacctctc gcgcgcgttc cgccgcgcct
     7681 ttggcgtcac catgaccgag tacgtgcggg acctccggat tcacgtggcc gccgaagcgc
     7741 tggtcagcgg cccggagccc ctgccgcgca tcgcccggag cgtgggctac cataacctgg
     7801 gccacttcac ccggtccttc aaacgcgcca ccggcatgac cccgggtgcc tatcgcggcc
     7861 gcggacgccg ggccgggtga tcatacttcc cacctgagcc cgccgatccg ggtgggcagg
     7921 ccgtctcccg actccaccga ttgcaccgcc tcaaaccgcc cgtagatact gcgtacgagg
     7981 cttttcctcc cggcagcctt gccttggttg gtcccatcat gggagcggcc tttccggagg
     8041 ctccggaaag ggct
//
LOCUS       DASWKS010000114         6852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_794696, whole genome shotgun sequence.
ACCESSION   DASWKS010000114 DASWKS010000000
VERSION     DASWKS010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6852
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794696"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VGA78_03565"
     CDS             complement(<1..645)
                     /locus_tag="VGA78_03565"
                     /inference="COORDINATES: protein motif:HMM:NF028196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892972.1"
                     /translation="MTPAVVVRAAGALVEAAPLRQAALNEIVRVGPRQLLGEVIRLDG
                     DCATVQVFEETSGLALDAPVLPTGAPLLAELGPGLLGSVLDGIGRPLELLARREGGFI
                     GAGTTAPTLDRERRWAFAPSVAIGASVEAGDVLGSVEEREGITHRVMVPPGAAGMVTA
                     IAAGEFTVEDVIGQLEDGTALRLAQHWPVRIPRPVKQWLPPSRPFMTGQRVFDFL"
     gene            complement(642..968)
                     /locus_tag="VGA78_03570"
     CDS             complement(642..968)
                     /locus_tag="VGA78_03570"
                     /inference="COORDINATES: protein motif:HMM:NF014092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit F"
                     /protein_id="HEX9892973.1"
                     /translation="MSGTVGILCRPATAAGFGLAGVTAEEIPTGIDPSLRIETVLSQG
                     GTGVLLIEESLYDAVGAELRIRLERSTRPVVVPFPGPSWGAGAAAEERVVELLRKAIG
                     YRVRLT"
     gene            complement(965..1981)
                     /locus_tag="VGA78_03575"
     CDS             complement(965..1981)
                     /locus_tag="VGA78_03575"
                     /inference="COORDINATES: protein motif:HMM:NF014094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATPase subunit"
                     /protein_id="HEX9892974.1"
                     /translation="MRWDDVNARARGLATHLLDEPNRLRLAKARTWDQLVQVARDAGY
                     PLGDRPPDSLDQFDAAVGEVTAKRLALLGRWLGYRRTALAVVYEVEERQALRALLRGA
                     VQGVSPAARLRSVLPTPALPRATLQQLARAQSPAELAALLLRHGHPAGRALAAAVADP
                     RPPGLLGLELALSRTFAARATRAARRGGRILRAFASWTIDLENAWTVLQAPGWGAEAI
                     APDGFLGGGRVLGLERFTALARLEDSSAIRNGLAEAFGGSPFATMFDAHGGDDAGFER
                     RALTAEIEWCQPMARLQPLGPAVVLGVLLRIRAEAHDLRAAAWRIALAAPTDAVAPSP
                     AGAL"
     gene            complement(1968..2561)
                     /locus_tag="VGA78_03580"
     CDS             complement(1968..2561)
                     /locus_tag="VGA78_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit E"
                     /protein_id="HEX9892975.1"
                     /translation="MALEALLEALERDALAEAGRRRTEARSGAEALIARAAAEVDRRR
                     ALTLARLASERRAQVAREAAAASRQLKGRVLTARAGVLGRVFGEARRLLAGLDQARWG
                     SRLPALVEQTLSYLDPSDAVLECQPSAESALRKVLADRPGVRVQPRDDAGPGLLGRSA
                     DGRVVVDNILTARLDRLRDDLAIQLIARLEGEPHALG"
     gene            complement(2564..2785)
                     /locus_tag="VGA78_03585"
     CDS             complement(2564..2785)
                     /locus_tag="VGA78_03585"
                     /inference="COORDINATES: protein motif:HMM:NF012365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892976.1"
                     /translation="MSAVWIGLAAALAIGIPALATGWAQSRIGPAVSAALAEKPELST
                     TAVLLVAIPETMVILGFVVAVLIMFRAGA"
     gene            complement(2800..4677)
                     /locus_tag="VGA78_03590"
     CDS             complement(2800..4677)
                     /locus_tag="VGA78_03590"
                     /inference="COORDINATES: protein motif:HMM:NF013647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033179 - proton-transporting V-type
                     ATPase, V0 domain [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATPase 116kDa subunit family protein"
                     /protein_id="HEX9892977.1"
                     /translation="MLRVRLLGPRERLESTLTALQDAGVVHLADTRINGSVRTIELSE
                     PQQRQIRHLRSIAAELDVILKRTSGQPSSRRPPGAEPPADFARWARRAHRIRRDLERI
                     DGAIHGLEAERVELVRFAQFVRAFHGLLPGGVNGRMKSYHLVLRGEDRQAVPRLREAL
                     AAVIGEEFVLESTQLPSGELAAALLVHAVDATRVERLLAQAGVGELPIPPRFARRPLG
                     ELLPELDARRGEVDRELGELRDRQAGLTRDELPPLAGARRVVADRLLTLEAQAAVGAT
                     ARSFVVEGWVPGAMFDRVARLLATRAGPEVVMETIAREEWKAEDAPVVLRNPRLFRPF
                     ETVTAMLPLPRYGTIDPTPFVGVFFPMFFGLIMGDIGYGLVLAVLALWLRRRGGPGST
                     VRSIGEVLGACAGFSVLFGLAFGEFLGDLGRRWFGLHPLVLDREEALLPFLGLSLAIG
                     FVHILIGLVLGIVNNARGHPRHAVGKTASLVMLITLLVSLLAAVEVLPGGFFTPAVVI
                     LLLAFPVLVVAEGIIAPIEFLSTVSNVLSYARIMALGTASVMMAAVANRLAGTMGGVL
                     VGLLFGLLFHLVNFALGIFAPTIHGLRLHYVEFFGKFYSPGGQQYRPFTHWRPDGVRA
                     A"
     gene            complement(4686..5024)
                     /locus_tag="VGA78_03595"
     CDS             complement(4686..5024)
                     /locus_tag="VGA78_03595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892978.1"
                     /translation="MGSAPSALERLLNTEGRLDAMLAQEARDAEAILRAAQEEVVELE
                     HRLEAELVSAAHEVDQRLAAERDARLAFIEDEARRSLEVLESVTPEQVGALAVWVVDR
                     VLESIDGASA"
     gene            5384..5569
                     /locus_tag="VGA78_03600"
     CDS             5384..5569
                     /locus_tag="VGA78_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892979.1"
                     /translation="MCVVAAIGLTRLMGTMLVGVGATDPPTFAAIIILFVAIALVACW
                     LPARRAGSQRGAAGGVN"
     gene            5642..>6852
                     /locus_tag="VGA78_03605"
     CDS             5642..>6852
                     /locus_tag="VGA78_03605"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9892980.1"
                     /translation="MKPTRRQFLHSVSLGGAALILGLPGCGQGVRRLNAGETELAPNQ
                     WIRIGADGSITLVAHKSEMGQGVRTALPLILAEELGADWKQVRVVHARPGPQFPRMGT
                     AGSSSVSSSWRPLRLAAAAARDMLIAAAAARWNVEPGDCRAEAGHVIHQPTGRTVGFG
                     SLVGAASALPVPAEPRLKPAAEFRMLGQRIAGIDLPEIITGRAIYAADVRLPGMRFAA
                     LARNPTHGRKALQVDDGAARALEGVDRVVSISNGIAVVAANTWTAVRGRDALRIEWEA
                     EPDPAANSAGYWRRLERAIAAGGRRARTAGDMQSTLAGAARRMEAEYRWPFQAHAAIE
                     PLCCVADVRADRCELWVGTQSPNGAQTEVAKLLGIPPERVTINVTLLGGGFGRRLAHD
                     FILEAVEISRAV"
BASE COUNT         1105 a         2487 c         2343 g          917 t
ORIGIN      
        1 gagaaaatcg aagacccgct ggccggtcat gaagggccgg ctgggcggca accattgctt
       61 caccggtcgg ggaatccgta ccggccagtg ttgagccagt cgcaaagcgg ttccatcctc
      121 cagctgtccg atcacgtcct cgaccgtgaa ctcacccgcc gcgatcgctg tcaccatccc
      181 ggcggcaccg ggcggaacca tgacgcggtg ggtgatcccc tcccgctctt ccaccgagcc
      241 gaggacgtcc cctgcttcaa cggacgcacc gattgcgacc gagggagcga aggcccagcg
      301 gcgttcccga tcgagggtcg gcgccgtggt accggccccg atgaacccgc cctcgcgccg
      361 ggccagcagc tcgagcggac gaccgatgcc atccagcacc gatcccagca gcccggggcc
      421 cagctcggcc aggagcggtg cgccggtcgg gagcaccggc gcgtcgaggg ccagcccgct
      481 ggtctcctcg aacacctgga ccgtggcaca gtccccgtcc aggcggatga cctcgcctaa
      541 cagctggcgg gggccgaccc gcacgatctc gttgagcgcg gcctgacgga gcggtgcggc
      601 ctcgaccagc gcgcccgcgg cgcgaaccac cacggccggg gtcacgtgag ccttacccgg
      661 tacccgatgg ccttccggag cagctccacg acccgttcct cggcggctgc tcccgccccc
      721 cacgatgggc cgggaaaggg gaccaccacc ggccgagtcg agcgttccag ccggatccgc
      781 aactcggcac cgaccgcatc gtagagcgat tcctcgatca gcagcacgcc agttccgccc
      841 tgactcagca cggtttcgat gcggagggaa gggtcgatcc cggtggggat ctcctcggcg
      901 gtgacgccgg ccaggccgaa cccggccgcg gtcgcaggcc ggcagagaat gccgaccgtc
      961 ccgctcataa tgcccccgcg ggtgagggcg ccaccgcgtc ggtcggggcg gccagcgcga
     1021 tcctccaggc ggcggcccgg agatcgtgag cctcggcccg gatccggagc aggacgccca
     1081 ggaccacggc cgggcccagc ggctgcagcc gagccatcgg ctggcaccac tcgatttcgg
     1141 cggtcagcgc gcggcgctcg aatccagcgt cgtcgccacc atgggcatcg aacatggtgg
     1201 cgaacgggga gccgccgaac gcctccgcca ggccgttccg aatggcgctc gaatcctcca
     1261 gccgggcgag ggccgtgaac cgctccagcc ccagcacacg gccgccgccc agaaacccgt
     1321 cgggcgcgat ggcttccgcg ccccatcccg gcgcctgcaa cacggtccag gcattctcga
     1381 gatcgatggt ccaggatgcg aaggccctga gaatccggcc gccccgccga gccgcccgcg
     1441 tcgcccgggc cgcgaaggtc cgggacagcg ccagctccag ccccaacagg ccgggcggcc
     1501 ggggatccgc caccgctgcg gcgagcgccc gcccggccgg gtgcccgtgc cgcagcagca
     1561 atgccgccag ctcggccggt gattgggcgc gggccagctg ttgcagggtg gcgcggggca
     1621 gcgccggtgt cggcaggacg ctccgcaacc gggcggcggg cgagacgcct tgtaccgccc
     1681 ctcgcagcag cgcccggagc gcctgccgct cctccacttc gtacaccacg gcgagggcgg
     1741 tgcggcggta ccccagccat ctgcctaaca gcgcgaggcg cttcgcagtg acttcaccca
     1801 ccgccgcgtc gaactggtcc aaggagtccg ggggccggtc tcccagcgga tagccggcgt
     1861 cgcgcgcgac ctggaccagc tggtcccagg tccgggcctt cgccagccgg agccgattcg
     1921 gttcatccag caggtgggtg gccagcccgc gggcccgggc gttgacgtca tcccagcgca
     1981 tggggctccc cctccagccg ggcgatcagc tggatggcca ggtcgtcccg gagccgatcc
     2041 aatcgggcgg tcaggatgtt gtcgacaacc accctcccgt ccgcgctccg gcccagcaga
     2101 cccggcccgg cgtcgtcccg tggttggacc cgcacacccg gccgatcggc caggaccttc
     2161 ctgagcgcgg actcggccga aggctgacac tccagcacgg cgtccgacgg gtcgaggtag
     2221 ctcagggtct gctcgaccag cgccgggagc cgcgatcccc atcgggcctg gtccaggccg
     2281 gccagcagtc ggcgggcctc gccgaaaacg cgcccgagca cacccgcccg ggctgtcagg
     2341 acccggccct tgagctggcg ggatgccgcg gcggcctcgc gcgcaacctg ggcccggcgc
     2401 tccgatgcga ggcgggcgag agtgagggcc cgccggcgat cgacctcggc ggcagcgcgc
     2461 gcgatcagcg cttcggctcc gctgcgggcc tcggtccgcc gccgcccggc ttcggccagc
     2521 gcatcacgct ccagcgcttc cagcagggcc tcgagggcca tggtcaggcg ccggcgcgga
     2581 acatgatcag gacggcgacc acgaagccca ggatgaccat cgtctccggt atcgccacca
     2641 gcagaactgc cgtcgtgctc agctccggtt tttccgccag cgcggccgac accgccgggc
     2701 cgatccgcga ctgggcccaa ccggtcgcga gggcgggaat gccgatcgcc agggccgcgg
     2761 ccaatccaat ccacacggca gacatcaaac ctccctcggt caggcggccc gtacgccgtc
     2821 gggccgccaa tgggtgaacg ggcgatattg ctgcccgccg gggctgtaga acttcccgaa
     2881 gaactcgacg taatggagcc ggagtccgtg gatcgtgggc gcgaagatcc ccagggcgaa
     2941 gttcaccagg tgaaaaagca gtccgaacag caggccgacc agcacgccgc ccatggtgcc
     3001 cgccagccgg ttggccaccg ccgccatcat caccgaggcg gtgccgagcg ccatgatgcg
     3061 ggcgtaggac aacacgttgg aaacggtgga cagaaactcg atgggcgcga taatcccttc
     3121 ggccaccacc agcaccggaa aggccagcag caggatcacc acggccgggg tgaagaagcc
     3181 gccgggcagc acttctaccg cggccagcag cgacaccagc agggtgatca gcatgacgag
     3241 cgaggcggtc ttgccaacgg catgccgggg atggccccgg gcgttgttca cgatgcccag
     3301 caccaggccg atcaggatgt gcacgaaccc gatggcgagc gacagcccca ggaagggcaa
     3361 cagcgcttcc tcccggtcga gcaccagcgg atggagcccg aaccagcgcc gccccaggtc
     3421 gcccaggaac tctccgaagg ccagaccgaa cagcaccgag aacccggcac aggcacctaa
     3481 cacctcaccg atggaccgca ccgtcgagcc ggggcctccc ctccgccgaa gccagagcgc
     3541 cagcaccgcc aggaccagcc cgtacccgat gtcgcccatg atcaggccga agaacatcgg
     3601 gaagaagacg cccacgaagg gggtcgggtc gatggtgccg taccggggca acggcagcat
     3661 cgcggtcacg gtctcgaagg ggcggaacaa tcgggggttc ctgagcacca ccggcgcgtc
     3721 ctccgccttc cactcctcgc gcgcgatggt ctccatgacg acctcgggac cggcccgggt
     3781 cgcgagtagc cgggccaccc gatcgaacat cgcgccgggg acccagccct cgaccacgaa
     3841 actccgggcg gtcgcgccga ccgctgcctg ggcttcgagc gtcaggagcc ggtcggccac
     3901 cacccgccga gctccggcca gaggaggcaa ctcgtcccgg gtgagtccgg cctgtcggtc
     3961 gcgcaattct cccagttccc gatccacctc accgcggcgg gcatcgagct ccggcagcag
     4021 ctcgcccagc ggacgcctcg cgaagcgggg gggaattggc agctcgccca cgcccgcctg
     4081 cgccagcagg cgttcgaccc gggtggcatc gacggcgtgg accagcagcg ccgccgccag
     4141 ctcaccggag ggcagctggg tgctctccag cacgaactcc tcgccgatga cggcggctag
     4201 agcctcgcgc agccggggaa ccgcctgccg gtcctcgccc cgcagcacga ggtgatagct
     4261 cttcatccgg ccgttgacgc cgcccggcag caagccatgg aaggcgcgga cgaactgggc
     4321 gaagcgaacc agttccaccc gctcggcctc cagcccgtga atggccccgt cgattcgctc
     4381 caaatcgcgg cggatccggt gggctcgccg ggcccagcgg gcgaaatccg ccgggggctc
     4441 ggccccgggc ggtcgtcgcg acgacggctg gccactggtc cgcttgagaa tcacgtccag
     4501 ctcggctgcg atgctcctga gatggcggat ctgacgctgc tggggttccg agagctcgat
     4561 ggtccggacc gagccgttga tgcgggtatc ggcgagatgg accacgcccg cgtcctgcag
     4621 cgcggtgagg gtcgactcga gccgctcgcg cgggccaagg aggcgaaccc ggagcatcgg
     4681 cacgatcacg cggacgcccc atcgatggac tcgaggacgc gatcgaccac ccagacggcc
     4741 agcgcgccaa cctgttcggg tgtgaccgac tccagcacct ccagcgaacg tcgggcctcg
     4801 tcttcgataa aggccagccg agcgtcacgc tcggccgcga gccgctggtc cacctcgtga
     4861 gcggcgctga ccagctcggc ttcgagccgg tgctccagct ccacgacctc ctcctgggcg
     4921 gcccggagga tcgcttcggc gtcgcgtgcc tcctgggcca gcatggcatc cagccggccc
     4981 tcggtgttca gcaggcgttc gagtgcgctt ggggcgctgc ccatcgatct tcgacccctc
     5041 aaggtgacac ccgcaatgtg gtccgagagg ggtgaacttt cggtgaaaga tggtatgagg
     5101 gttcttcagt ggtgcgtggc aacttcggag agacgggctc gggaaaggcc gagggactca
     5161 ggggggagag gggggtgaat gcagaatgcc gagtgcccaa tgcccagtgc agaggtctgg
     5221 tctagccctc cgacccctgt actggcactc ggcggagcgg cgagtgaatg cagagcgccg
     5281 aatgcccagt gcccattgca gaaggtcacc cctccaccat acctctgcat tgggcattgg
     5341 gcattgggca ttgggcattg ggcattctgc attgactctc ccggtgtgcg tagtcgccgc
     5401 catcggtctg acccggctga tgggaaccat gctggtcggg gtgggggcca ccgacccacc
     5461 gacttttgcc gccatcatca tcctgttcgt ggccatcgcg ctggtagcct gctggcttcc
     5521 ggcccgccgg gctggatccc aacgcggcgc tgcgggagga gtgaactgac agtactcatt
     5581 cagtactcag tactgcgagc tgtaaccccg gcgagggttc cttcgtccgg tctggtacgc
     5641 catgaaaccc acccgccggc agtttctcca ctccgtttcc ctgggcgggg cggctctcat
     5701 tctcggactg ccaggttgcg gccagggtgt gcgtcgcttg aacgccggtg aaaccgagct
     5761 cgcgcccaac cagtggatcc ggatcggcgc cgatggcagc atcaccctcg tcgcccacaa
     5821 gtccgagatg ggacagggcg tgcgcaccgc gctgcctctg atcctggccg aggagctcgg
     5881 cgccgactgg aagcaggtca gggtggtgca cgcccggccc ggtccgcagt tcccccgaat
     5941 ggggaccgcg ggaagcagca gcgtatcctc ctcctggcga ccgctgcgcc tcgccgccgc
     6001 cgccgcgcgt gacatgctga tcgccgccgc tgccgcccgc tggaacgtcg aacccggcga
     6061 ctgccgcgcc gaagccgggc acgtcatcca tcaacccacc gggcggacgg tcggcttcgg
     6121 atccctggtc ggagccgcat cggccctgcc ggtaccggcc gaacccaggc tcaagccggc
     6181 cgccgagttt cggatgctgg ggcagcggat cgccggaatc gatctgccgg agatcatcac
     6241 gggccgggcg atctacgccg ccgacgtccg gctccccgga atgcgcttcg ccgccctggc
     6301 gcgaaacccg acccatggcc gaaaagccct ccaggtggac gacggagccg cccgcgccct
     6361 ggagggagtc gaccgggtgg tttcgatttc caacgggatc gccgtcgtcg cggccaacac
     6421 ctggaccgcg gtacgcgggc gggatgcgct gcggatcgag tgggaagccg agcccgatcc
     6481 ggccgccaat agcgccggtt actggcgccg gttggagcgc gccatcgctg ccggcggccg
     6541 ccgggcccgg accgcgggcg atatgcagag caccctggca ggggcggccc ggcggatgga
     6601 ggccgagtat cgctggccct tccaggcgca cgccgccatc gagccgttgt gctgcgtcgc
     6661 cgacgtgcga gccgaccgat gcgagctctg ggtcggcacc cagtcgccca acggggccca
     6721 gacggaggtg gcgaagctgc tcggcattcc gcccgagcgg gtcaccatca acgtgacgct
     6781 gttaggcggc ggattcggcc ggcggctggc ccacgatttc attctcgagg cggtcgagat
     6841 ctcccgggcc gt
//
LOCUS       DASWKS010000115         2147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_795998, whole genome shotgun sequence.
ACCESSION   DASWKS010000115 DASWKS010000000
VERSION     DASWKS010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795998"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VGA78_03610"
     CDS             <1..435
                     /locus_tag="VGA78_03610"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEX9892981.1"
                     /translation="APANAPEASADPTALRDAIQAREREWSAAFLAGNAAGVAALYTE
                     DGAQVQPSGDWFRGHDGITKAMQAQFDTLAVTTREDITDEVFAAGDYAVEIGHYSYQG
                     MSKTDSTPRSAAGSYMVLWRKDADGVWRLHRDIGSEAPTKKP"
     gene            525..911
                     /locus_tag="VGA78_03615"
     CDS             525..911
                     /locus_tag="VGA78_03615"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HEX9892982.1"
                     /translation="MPIRIVRLGSPRAPGEGVRIGTVRRPPRGVPKQDFARADYYDIW
                     LPELAPTEALVQAARTAQTDAEWQRFRRRYRAELAKPPGRRILEVFAAFSHTANFSLG
                     CYCELEARCHRSVLRELLVEQGAAIV"
     gene            complement(955..1128)
                     /locus_tag="VGA78_03620"
     CDS             complement(955..1128)
                     /locus_tag="VGA78_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892983.1"
                     /translation="MGIALGGTDKDRLTGIFNALAEGGKIQMPPTRQPGGADVGWLTD
                     QFGINWTVSIDKG"
BASE COUNT          341 a          726 c          684 g          396 t
ORIGIN      
        1 gcgccggcca atgcgccgga agcatcagct gacccgaccg cgctccgaga cgcaattcag
       61 gcccgggagc gggagtggtc ggccgccttc ctcgccggta acgcggctgg agtcgccgcc
      121 ttgtacaccg aagacggcgc ccaggtacag cccagtggtg actggttccg gggccatgat
      181 gggatcacca aggcgatgca agcgcagttc gatacgctcg ccgtcacgac ccgggaagac
      241 atcactgacg aagtcttcgc cgctggcgac tacgccgtcg aaatcggtca ctacagctac
      301 caagggatga gcaagaccga cagcaccccc cggtctgccg ccgggagtta catggtgctc
      361 tggcggaaag atgctgacgg tgtctggcgg ctacaccgcg acattggtag cgaggcaccg
      421 accaagaagc cgtagcagct taccagagta agggtgaccg cgctcagacc ttaaggcttt
      481 tccgttaggt ggcgcggaag gctgacccgg actgctggtg gcccatgccc attcggatcg
      541 ttcgactcgg atcgccccgc gctcctggcg aaggagtacg gatcggtacg gtgcgacgcc
      601 cgccgcgcgg ggtccccaag caagactttg ctcgcgcgga ctattacgac atttggctgc
      661 cggaacttgc ccccaccgaa gccctcgtcc aggcggcccg caccgcccag acggacgccg
      721 agtggcagcg attcaggcgt cgataccgcg ccgaactagc caagccgccc ggtcgtcgca
      781 tcctcgaggt gttcgccgcc ttctcccaca cagccaactt ctcactcggc tgttactgtg
      841 agctcgaggc ccgctgccat cgatcggtgt tacgggagct tctggtggaa cagggcgccg
      901 ccattgttta gccgatacca gccggtggca tgccggccat gaccttcagg cgccctaccc
      961 cttatcgata ctgaccgtcc agttgatgcc gaactggtcc gtcagccagc ccacatccgc
     1021 gcccccgggc tgcctcgtcg gcggcatctg gattttgccg ccctcagcca gagcgttgaa
     1081 gattccggtg agccggtctt tgtccgtgcc gcccagggca atgcccatgt gctcgccgac
     1141 cttgttcctg acctcaaccg ccttcccggc atcccgtcat tccggcgctg gattcgcgcg
     1201 cgggcgatgc tggacgcggt gctgtcgcgc ctgagtggga agcgcggtat tactccttcg
     1261 actccaatgg gcgccgggcg agatgctggc ttcgatgcgg aacggctcag gtgatcactc
     1321 acagcgggcc tggtgcggcg gctcaatccc gaccttgatc tgggaacgct cgcgagtgac
     1381 gtcgacgaga tcgggtaccc ggaaagtccg cacgccacct aagccgtggc tgcgccgacc
     1441 aaggtcgctc tgggtggtca tcctgatggc cctcgggacc gcgtgtggcg gcgggttgcc
     1501 ggagggttac gcagtcctca atccgctgct ggatagtgtt ctccctggtg tccgactggg
     1561 ctcgcgggcc gctcctcccg cagagcgata ccatctcacc gtggcgccct acgtcggcta
     1621 cggggattca accgcgcggc ctgccccggg ctgccgcggc ctctacctcg tcgtcagccc
     1681 ccacttggtc tcggaagccg acgtgccatc acccggatcg cgcgtcaccg cggtccacgt
     1741 gggcctggag tcatggctgg ccgcccagtc cctcgttgcc ttcgtatcgg ctcggttagg
     1801 cgcgccagag cattattgtg acacctctgg aaaggacaat gtgcggttcc ggctcacctt
     1861 ctggccggcc ggcggtcggc aaggactgat gatgcggttt cgatccgaca ccgctggggc
     1921 aggtctcatg atcttcaatg cggtacggcc cgactcgagc cggacagtcc cgggacgctg
     1981 cgcaattcag cctgctgctg aagccgccta agccccgacc gtcgcggcag ggctgcacct
     2041 gggatcaggg agtcggggcc ggacccgtcg ttctggatct cgtgcggtgc catcgttgtt
     2101 ctcgcggtcg ccacagtatg gtcggccttt cgcctcgctg gtagcgc
//
LOCUS       DASWKS010000116         2802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1163368, whole genome shotgun sequence.
ACCESSION   DASWKS010000116 DASWKS010000000
VERSION     DASWKS010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163368"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..1097)
                     /locus_tag="VGA78_03625"
     CDS             complement(48..1097)
                     /locus_tag="VGA78_03625"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003513.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEX9892984.1"
                     /translation="MTIDLTGMVRPHLVEMTKREDNPNLAEFRLQPLERGFGHTLGNA
                     LRRMLLSSLRGTGVWAFRLDGVVHEHQTVGGVLEDVHQIIQRLKALTLVLDEHADDAV
                     LRIRKAGPGPVLARDIQDHPSARIVNPDHLLFTLQDDREVSMDLYVNKGRGYVESEMH
                     PIDRSLPVDTVRIDAIYNPVRRANFTVTETRVGQRTDYDRLAVMVETNGTITPEDAIA
                     YAAALCQEHFRYFVEFGKVPAARPAPTEAGVVPGSLRQQLGRLIDDFGLSVRSLNSLK
                     NSNIRTLRDLVEFTEDDLLKVKNVGEKALAEIADLLQREGLNFGMVFEESGGELRIVH
                     PGTPPMAQTGSSEEM"
     gene            complement(1116..1751)
                     /gene="rpsD"
                     /locus_tag="VGA78_03630"
     CDS             complement(1116..1751)
                     /gene="rpsD"
                     /locus_tag="VGA78_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002614801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEX9892985.1"
                     /translation="MRYSGPQCRLCRREGTKLFLKGTRCLTEKCAVDRRQYAPGQHGP
                     TGGNRGRKASEYSKQLREKQKVKRIYGLSERQFRSTFDEAARRPGVTGTNLLQELESR
                     LDNVVYRMGFAVSRRQARQLVRHGHIQINAKRVSIPSYRVEPGQEVRVHPESRELVPI
                     KVAKDFASRGAPLAWISVDLEKSAGRITEPPNRDQIPLNAQEQLIVELYSK"
     gene            complement(1755..2189)
                     /gene="rpsK"
                     /locus_tag="VGA78_03635"
     CDS             complement(1755..2189)
                     /gene="rpsK"
                     /locus_tag="VGA78_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012397714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEX9892986.1"
                     /translation="MTNPTPATPTGSTPAAAAPKPAAKRSKKVVESEAIVHISATFNN
                     MLITITDTKGNAIVWSTAGKAGFKGSKKSTPFAATVAAENCGREAYNLGVRRVHVLVQ
                     GPGSGRESAIQALASAGLRVASIKDVTPIPHNGCRPPKKRRV"
     gene            complement(2193..2573)
                     /gene="rpsM"
                     /locus_tag="VGA78_03640"
     CDS             complement(2193..2573)
                     /gene="rpsM"
                     /locus_tag="VGA78_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009125149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEX9892987.1"
                     /translation="MARIAGVDLPREKRVEVALTYIHGIGRPTSNRLLDESGVSPDTR
                     VRDLSDAEVARLRQMIERSVRVEGALRTEVAMNIKRLMDVGSYRGSRHRKGLPVRGQR
                     THTNARTKKGPRRAIAGKKKVTKK"
     gene            complement(2576..2692)
                     /gene="rpmJ"
                     /locus_tag="VGA78_03645"
     CDS             complement(2576..2692)
                     /gene="rpmJ"
                     /locus_tag="VGA78_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEX9892988.1"
                     /translation="MKVRSSVKPICEHCKVVRRAGVIRIICSRNPKHKQRQG"
BASE COUNT          423 a          898 c          956 g          525 t
ORIGIN      
        1 gctggccgtt cgactcagct gccggccctt ggcgcggtgc cgcatcctta catctcctcg
       61 ctgctaccgg tctgcgccat gggcggagta ccggggtgaa cgatccggag ctcgccgccc
      121 gactcctcga acaccatgcc gaagttgagt ccctcgcgct gcagcaggtc ggcgatttcg
      181 gccagggcct tctcgcccac attcttcacc ttgaggagat cgtcctcggt gaactccacc
      241 aggtcgcgca gggtgcggat gttggagttc ttgaggctgt tgagcgagcg gaccgagagg
      301 ccgaagtcgt cgatcagccg gcccagctgc tggcggagac tgccgggaac cacgccagcc
      361 tccgtgggag ccggccgcgc cgcggggacc ttgccgaatt ccacgaagta gcggaaatgc
      421 tcctggcaga gcgcggccgc gtaggcgatg gcgtcttccg gcgtaatggt gccgttggtc
      481 tccaccatga cggcgagccg gtcgtagtcg gtacgctgac cgacccgggt ctcggtgacg
      541 gtgaagttgg cccgacgcac cggattgtag atggcgtcga tgcgcacggt atccaccggc
      601 agcgaccggt cgatcgggtg catctcggac tcgacgtatc cccggccctt gttgacgtac
      661 aggtccatgg agacttcccg gtcgtcctgc agggtgaaca gcaggtgatc gggattgacg
      721 atgcgggccg agggatggtc ctggatgtcg cgggccagca ccggcccggg accggccttg
      781 cggatccgga gcaccgcgtc gtcggcgtgc tcgtcgagca ccagggtcag cgccttgagc
      841 cgctggatga tctggtgcac gtcctccagc accccaccta cggtctggtg ttcgtgcacc
      901 acgccgtcga gccggaaggc ccacaccccg gtgccgcgga gcgacgacag cagcatccgg
      961 cgcagggcgt tgccgagggt atgaccgaag ccccgctcca gcggctggag ccggaactcg
     1021 gcgagattcg ggttgtcctc ccgcttggtc atttcgacca ggtgggggcg gaccattccg
     1081 gtgagatcga tcgtcatcgt tgggttccgt ctctcttact tggagtacaa ctcgacgatc
     1141 agctgctcct gggcattgag cgggatctga tcgcggttgg gcggctcggt gatccggccg
     1201 gccgatttct ccaggtccac gctgatccag gcgagcgggg caccgcggga ggcgaagtcc
     1261 ttcgccacct tgatcggcac cagctcccgg ctctccggat ggacccgcac ttcctgaccg
     1321 ggctcgaccc ggtaggaggg aatgctcacc cgcttggcgt tgatctggat gtgcccgtga
     1381 cgcaccagct ggcgggcctg tcgccggctg acggcgaagc ccatccgata caccacgttg
     1441 tcgagccggg attcgagctc ctgcagcagg ttggtgccgg tgacgccggg gcgccgggcg
     1501 gcttcatcga acgtgctccg gaactggcgt tccgaaagcc cgtagatccg ctttaccttc
     1561 tgcttctcac gcagctgctt ggaatactcc gaggccttgc ggccccgatt gccgccggtg
     1621 ggaccgtgct ggcccggggc gtactggcga cgatcgacgg cgcacttctc ggtgaggcag
     1681 cgagtgcctt tcaggaacag cttggtgcct tcgcggcggc agagtcggca ctggggtccg
     1741 gaatagcgca tggctcagac ccgccgcttc ttgggaggcc ggcagccgtt gtgcgggatg
     1801 ggcgtgacgt ccttgatgga agcgaccctg aggccggccg aggccagggc ctgaatggcc
     1861 gactctctcc cgctgcccgg gccctgcacc aggacgtgca cccggcgcac gcccaggttg
     1921 tacgcctccc ggccgcagtt ctcggcggcg acggtggcgg cgaacggggt ggacttcttg
     1981 gagcccttga accccgcctt gccggcggtg ctccacacga tcgcattgcc cttggtgtcg
     2041 gtgatcgtga tgagcatgtt gttgaaggtg gccgagatgt gcacgatggc ctcggactcg
     2101 acgaccttct tggagcgctt ggcggccggc ttgggagcag ccgcggccgg ggtggagcca
     2161 gtgggagtag caggagtcgg attggtcatc ggttacttct tcgtcacctt cttcttgccg
     2221 gcgatggcgc gccgcggacc cttcttggtc ctggcattgg tatgagtacg ctggccccgg
     2281 accggcagac ccttccggtg gcgtgagccc cggtagcttc cgacgtccat cagccgcttg
     2341 atgttcatgg ccacttcggt ccgcagcgcg ccttcgaccc gcaccgagcg ctcgatcatc
     2401 tgacgcagcc gagccacctc ggcgtcggag agatcgcgca cccgggtatc gggactgacc
     2461 cccgactcgt cgagcaggcg gttactggta ggacggccga tgccgtggat ataagtgagc
     2521 gcgacctcga ctcgcttttc acgcgggaga tcgaccccag cgatacgtgc catggctacc
     2581 cttgccgctg cttgtgcttc ggattgcggc tgcagatgat ccggatgaca cctgcccgcc
     2641 ggacgacctt gcagtgctca caaattggct tgacgctgga ccgaaccttc actcgctacc
     2701 ccctaaaccc tggttagtgc agagctttca attttagtca gggcaacgac ttgacgcaag
     2761 cgacgggcgg acgggacggg cggacgggcg gacgggcgga cg
//
LOCUS       DASWKS010000117         5815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3015004, whole genome shotgun sequence.
ACCESSION   DASWKS010000117 DASWKS010000000
VERSION     DASWKS010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3015004"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..2105
                     /locus_tag="VGA78_03650"
     CDS             171..2105
                     /locus_tag="VGA78_03650"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9892989.1"
                     /translation="MFLRSLLATVVMPLTLAAQSPSSSPVVPDSVAPRRVLTREDLEP
                     FLDGLVSWELKRFDIAGAVIAVVKNGQLLLAKGYGYSDVARRIAPSPDTTLFRVASIS
                     KTFNATAVMQLVEQGKLDLDRDIAGYLDFELPKRFPEPITLRHLMTHTAGFEESAKQL
                     PADSGQSVPLARVMRAVPHQIYRPGTVTAYSNYGADLAGYIVERVSGVPFAEYIRAHI
                     LEPLGMRHSSFAEPLPPHFKPLVSKEYRVASDSVKEFEVLQGEPSGNLSSTARDMAQF
                     MIAHLQLGRYQDRRILSDTTARFMATTQFRTHPAVTGMALGFFEESRDGYRIIGHGGD
                     LSRFHSHMSLLLDDAVGFFISVNSAGSGGGLYGIREAVRDAFLARYFPRREPLEPVIA
                     NRREEAEKVTGPYLLSRRGETTLFRVASLALPLSVQANRDGSVQVPFLTGANGNPVRW
                     YPIGSLVFRTEDGSERIGFVTDSGGRVIRMALLGGHELHKAGARDDVRRNYWLIGSCL
                     GVIAATLVLWPVAGLIRRRYRQPVPADGVSSRLRALTRVVALLDLAFIGAFATIFSLA
                     LGEKIELDSGMDPLLRGSHVLAVLGLLGSVAVIVACVRSWTRGTSRLARLKYTALTLA
                     CFGFGWFILHWNLLVWNLDF"
     gene            complement(2272..3762)
                     /locus_tag="VGA78_03655"
     CDS             complement(2272..3762)
                     /locus_tag="VGA78_03655"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX9892990.1"
                     /translation="MLLHPLTFVEEESQDVTPENTIIAPTPAEPRPRLLLVGDVGVRP
                     DGLERSLIRAGFEIGEISLGSPLTSRPDVVLLTASGELDAVGALEVLRQTLPAGLPVV
                     VALDAGDRASVVRVLDAGAGDVIPGPVHLPELTARLQARVAGCRETARAMALTDQASR
                     LFDIFQDIAVAFRPEEIVHTLVQRVGDVLGLAHCACIFTTPGRDEGRMIALHENPKVR
                     DVPVDLTRYPEVVEAVRSAGTVFVPDVATHPFFLKARTRAQQSGVTMDVRSAAAIPLG
                     LQGRTIGAVVIRSRASELIQPEQLRFAERLVRGTSRVLESLERRAAINRRQVSGDVTD
                     PLTGCASLDALDRRLKEEFERARRYGLSFSMVLLDVDGLAAINTRYGMEAGDRTLADL
                     GAILQREIRGPDFVARYGGDEFALVLPETSLDGARRSIDRVRNRVGQHPFMGLVADER
                     PTLSAGVVTYPHPAAVHTEDLFALAESALLRAKAEGGERIGVAEAA"
     gene            3751..4635
                     /locus_tag="VGA78_03660"
     CDS             3751..4635
                     /locus_tag="VGA78_03660"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEX9892991.1"
                     /translation="MKQHRLRELRLGAHVSTQGGLHTAPARAAEIGATAIQIFTKTPC
                     QWREPVVTSEVANAFRESLAQNHVTSVVSHDSYLINLASPDPGLNARSTTAFMLELKR
                     CEALGIGWVVSHPGNYIDDPKTGLRRNANRLTECLRLVPEWVGVLLETTAGTGTALGS
                     SFPELARLRQAISPDVRDRVGFCADTCHLYATGYDLRTRYDEVWEEWDRTLGLDLLGC
                     LHLNDSLTPLGARRDRHALIGDGSLGVDPFRRIMRDPRFRSVPKLLETPKGKDGITND
                     RSTIRRLRRWATSPVRAM"
     gene            4945..>5815
                     /locus_tag="VGA78_03665"
     CDS             4945..>5815
                     /locus_tag="VGA78_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEX9892992.1"
                     /translation="MVSLLRQGVTTSTVHANLRHPELLEHALRRQEGHLTNRGAFVGY
                     TVPHTGRSPNDKFVVDEPASRERIWWEKNKPLAESHFDALLTDVKAHLSAQQEVFVQD
                     LYGGADAAVRLPVRFITASAWHALFVRNMFIRPGVADLVGFEPGFTVYHAPEMQADPG
                     RHGTKTGTFIVLHFGKRIILVGGTRYAGEMKKSIFTALNYLLPLRGVLPMHCSANVGR
                     AGDTAIFFGLSGTGKTTLSADPNRRLIGDDEHGWSDDGVFNFEGGCYAKVIRLRADTE
                     PEIYAATHMFGTVL"
BASE COUNT          969 a         1976 c         1882 g          988 t
ORIGIN      
        1 ccgtcgaagg cgggttgctc ctgaccgctt tcgaccattc gcttttcctc ccgtcttcga
       61 ctgtcttcga ccgccttcga ccctttcgac ccagccagcg cccagttggg cgctggctgc
      121 tgcataccat tcgggataca attcgctacc cccaagtgga gcgccgaacc gtgttcctgc
      181 gatcgctgct cgcgactgtc gtcatgcccc tgacgctcgc ggcgcagagc ccgtcgtcat
      241 cccccgtggt cccggactcc gtcgctcccc ggcgcgtcct cacccgggaa gacctggagc
      301 cgttcctcga cggcctggtc tcgtgggagc tcaagcgatt tgacatcgcc ggggcggtga
      361 tcgccgtggt gaagaatggg cagctgctcc tggccaaggg gtatggctac tcggatgtgg
      421 cccgccggat cgctccctcg cccgacacca cgctgttccg ggtcgcctcc atctccaaga
      481 ccttcaacgc caccgccgtg atgcagctag tcgaacaggg caagctcgac ctcgaccggg
      541 acatcgccgg ctatctcgat ttcgagctgc ccaaacgctt tcccgaaccg atcacgctgc
      601 ggcacctgat gacccacacg gcggggttcg aggagtcggc caaacagctg ccggccgact
      661 cgggccagtc ggtaccgctc gcccgggtca tgcgggcggt cccccaccag atctaccgtc
      721 ccggcaccgt gaccgcctac tccaactacg gcgcggacct ggcgggatac atcgtggaac
      781 gggtgtccgg ggtgccgttc gccgagtaca tccgggccca catcctggaa ccgttaggca
      841 tgcggcactc gtccttcgcc gagcccctgc ccccccactt caagccgctg gtctcgaagg
      901 agtatcgggt cgcctccgac tcggtgaagg aattcgaagt gctgcagggc gagccgtccg
      961 gcaacctctc gtcgacggcc cgggacatgg cgcagttcat gatcgcgcac ctgcagctgg
     1021 gccgttatca ggaccgccgc attctgagcg acaccaccgc ccgcttcatg gcgacgaccc
     1081 agttccggac ccatccggcg gtcaccggga tggcgctcgg tttcttcgag gaatcgcggg
     1141 acggctaccg gatcatcggc cacggcggcg atctcagccg gttccacagc cacatgtcgc
     1201 tcctgctgga cgacgccgtc gggttcttca tctcggtcaa cagcgccggc tcgggcggcg
     1261 gtctgtatgg catccgggaa gcggtgcggg acgccttcct ggcccggtac ttcccccggc
     1321 gcgagccgct ggaaccggtg atcgcgaacc ggcgggaaga agccgagaag gtgaccggcc
     1381 cgtatctgct ctcgcgccgg ggtgagacca cgttgtttcg agtggcctcg ctggcgctgc
     1441 cgctctcggt ccaggcaaac cgggacggca gcgtccaggt cccatttctc accggggcga
     1501 acggtaatcc ggtccggtgg taccccatcg gctcactggt cttccggacc gaggatggca
     1561 gtgagcggat cgggttcgtg acggacagcg gcgggcgcgt gatccggatg gcgcttctgg
     1621 gaggtcatga actgcacaaa gccggcgcaa gagatgatgt gcgccggaac tactggttga
     1681 tcggcagctg cctcggcgtc atcgccgcga ccctggtgct gtggccggtg gcgggactca
     1741 tccgccgccg ctaccgccag ccggttccgg cagatggtgt ctcgagccgg ctccgggccc
     1801 tgacccgagt ggtcgccctc ctcgacctgg ccttcatcgg agcctttgcc accatcttct
     1861 ccctggccct cggggaaaag atcgagctcg acagcggtat ggatcccctg ctccgcggca
     1921 gccacgtgct ggctgtgctg ggcctgctcg gcagcgtggc cgtgatcgtg gcgtgcgtgc
     1981 gctcctggac ccggggcacc agccgtctcg cccggctcaa gtacaccgcg ctcaccctgg
     2041 cctgcttcgg tttcggctgg ttcatcctgc actggaacct gctggtctgg aacctcgatt
     2101 tctgaaaagc ggtcgaagac ggtcgaaaca gtcgaaggcg gtcgaaacag tcgaaggcgg
     2161 tcgaaggcgg tcgaagacgg taggaaaaac gaaaggtcga aagcggctgg gagcaaaccg
     2221 ccttcgacca gggttcgact gtcttcgact gccttcgact gccgaaggca gctacgcggc
     2281 ttccgccacc ccgattcgct ccccaccttc cgccttggct cgaagcaggg ccgactcggc
     2341 caacgcgaac agatcctccg tgtgcaccgc ggccggatgg ggataggtga cgacgccagc
     2401 cgagagggtc ggccgttcgt cggcgaccag acccatgaac gggtgctggc cgacccggtt
     2461 ccggacccgg tcgatggaac ggcgggcccc atcgagcgac gtttccggca gcaccagcgc
     2521 aaactcatcc ccgccgtacc gggccacgaa atccgggccc cggatctcgc gctgcaggat
     2581 ggcacccaga tcggccaggg tgcggtcacc tgcctccatg ccgtaccggg tgttgatcgc
     2641 ggccaatcca tccacgtcca gcagcaccat gctgaagctg agcccgtagc ggcgggcccg
     2701 ttcgaactct tccttgagcc ggcgatcgag cgcatccagg ctggcgcacc cggtcagcgg
     2761 atcggtcaca tcacccgaga cctggcgccg gttgatggcg gcgcgccgct ccagactctc
     2821 gagcacccgg ctggtgcccc gcaccaggcg ctcggcgaag cgcagctgct cgggctggat
     2881 cagctccgat gcccgggacc ggatcaccac ggcaccgatg gtccgtccct gcaggccgag
     2941 cgggatcgcg gccgcgctcc gcacatccat ggtgacgccg gactgttgcg cgcgggtgcg
     3001 agccttcagg aaaaacggat gggtggccac atccggcacg aagacggtgc cggcggagcg
     3061 caccgcttcg accacctccg gatagcgggt cagatccacc ggcacatcgc gcaccttggg
     3121 gttttcgtgc agcgcgatca tccggccttc atcccggccg ggcgtggtga agatgcaggc
     3181 gcagtgggcc agccccagga cgtcgcctac ccgctggacc agcgtgtgga cgatctcttc
     3241 gggacggaac gctaccgcga tatcctggaa gatgtcgaac aaccgtgagg cctggtcggt
     3301 cagggccatg gcccgggccg tttcgcggca gcccgccacg cgggcctgga gccgggcggt
     3361 cagctccggc aagtggaccg gcccggggat gacgtcgccg gcgccggcgt cgagcacgcg
     3421 gaccacgctg gcgcggtcgc ccgcgtccag cgccaccacg acgggaagcc cggccgggag
     3481 ggtctggcgc agcacctcga gcgcgcccac agcgtcgagc tcgccagagg cggtcaggag
     3541 gaccacgtcc gggcgcgaag tcaacggcga tccaagcgag atttccccga tctcgaaccc
     3601 ggcccggatc agggaacgct cgagtccatc aggccgcacg ccgacatcac ccaccagcag
     3661 gagccggggg cgaggttccg ccggggtcgg agcaatgatg gtgttctcgg gcgtcacgtc
     3721 ctgggactcc tcctccacga aagtcagcgg atgaagcagc atcggcttcg cgagctccgg
     3781 ctcggggccc acgtttcgac tcagggcggt cttcacaccg cccccgcgcg ggctgccgag
     3841 atcggcgcca cggcgatcca gatcttcacc aagacaccct gccagtggcg agaacccgtg
     3901 gtgacctccg aggtcgcgaa tgcgttccgc gaatcgctgg cacagaacca cgtcaccagc
     3961 gtggtttcgc acgattcgta cctcatcaat ctggcctccc cggacccggg tctaaacgca
     4021 agatccacaa cggctttcat gctcgagctg aagcggtgtg aagcgctggg aatcggctgg
     4081 gtcgtgtcgc acccgggcaa ctatatcgat gacccgaaaa cggggcttcg acggaatgcc
     4141 aaccggctca cggagtgcct gcgcctggtg ccggaatggg tgggggtcct gctcgagacg
     4201 acagcgggaa ccggtacggc gctggggtcc agttttcccg agttggcccg cttgcgccaa
     4261 gccatttcgc ccgacgtgcg cgaccgggtc gggttctgcg ccgacacctg ccatctctac
     4321 gccaccggct atgacctgcg gacccgatat gacgaggtct gggaggagtg ggaccggacc
     4381 ctggggctgg acctgctggg ctgccttcat ctgaacgact ccctcacccc gctcggggcg
     4441 cgccgcgacc gtcatgcgtt gatcggcgac ggttcgctcg gggtcgatcc cttccggcgg
     4501 atcatgcggg atccgcgatt tcggagcgtc cccaagctgc tggagactcc caagggaaag
     4561 gacggaatca cgaacgaccg gtctactata cgacgcttga gacgctgggc gacatcacct
     4621 gtccgtgcta tgtaatgagt tcggcctaac agttatttga cagtgacccc attcgggaac
     4681 agtacaatta tgatgcagtc ggcacccact tggaatgtag ccgagccgac gccgcattcc
     4741 aagcgcgact ggctccgcct ggtggatgtt ggatccgcgg tgggaacccg ccacggctgg
     4801 tccgggcgaa caccataaca tgattaaaaa caatcactta cgcgccaggc gccttgcgcc
     4861 cccactaccc gccgacgatc tttccccgct cttgtgcgtt cgaatccacg ggggcttatg
     4921 tccgcgacgt cattggtcac cgagatggtc tccctcctcc gccagggagt gacgacctcc
     4981 accgtgcacg ccaacctgcg ccaccccgaa ttgctggagc acgcgcttcg gcgccaggaa
     5041 ggtcacctca ccaatcgggg agcgtttgtg gggtacaccg tcccgcatac cgggcggtcg
     5101 cctaacgaca agttcgtggt ggacgagccg gcgtcgcgcg agcgcatctg gtgggagaag
     5161 aacaagccgc tggccgagtc ccatttcgat gcgctgttga cggacgtgaa ggcccatctc
     5221 agtgcgcagc aggaagtctt cgtgcaggac ctgtacggcg gggccgatgc cgcggtccgg
     5281 ctgccggtgc ggttcatcac ggccagtgcc tggcacgcgt tgttcgtccg gaacatgttc
     5341 atccgcccgg gggtggcgga tctggtggga ttcgagcccg gcttcacggt gtaccacgcg
     5401 cccgagatgc aggccgatcc gggccgtcac ggcaccaaga ccggcacgtt catcgtcctg
     5461 cacttcggga agcggatcat cctggtgggc gggacccgtt acgccggcga aatgaagaag
     5521 tcgatcttca cggcgctcaa ctatctgctc ccgctgcgcg gtgtcttgcc catgcactgc
     5581 tcggccaacg tcggccgggc cggcgacacg gccatcttct ttggattgtc tggcaccggc
     5641 aagaccacgc tgtcggccga cccgaatcgc cggttgatcg gtgatgacga gcacggctgg
     5701 agcgacgacg gggtgttcaa cttcgaaggc gggtgttacg ccaaggtaat ccgacttcgg
     5761 gccgacaccg agccggaaat ctacgcggcc acccacatgt tcgggacggt gctcg
//
LOCUS       DASWKS010000118         2269 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3015022, whole genome shotgun sequence.
ACCESSION   DASWKS010000118 DASWKS010000000
VERSION     DASWKS010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3015022"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VGA78_03670"
     CDS             <1..750
                     /locus_tag="VGA78_03670"
                     /inference="COORDINATES: protein motif:HMM:NF016220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease"
                     /protein_id="HEX9892993.1"
                     /translation="GLPDEAIASAMDQLTRDHSTMSLVAANREVWHLLRDGVPVTVHD
                     PDHGGQRDERTRVMDWEHPRDNDFLAVNQLTVTGVLYTRRPDIVGFVNGLPLVDLEFK
                     KPGVPARAAFDDNITTCKSDIPQLFWTNTLLIASNGTDGRVGSGRGIQRIEVDPNPGP
                     VGLVHAAVEQRRADLDPDGVGGGNRHGTECKEECQGQRHPGVSSVAVGGCRRNHTGQT
                     APKILSRDPCLPSTPNARATHAGSRSRPRGT"
     gene            681..1070
                     /locus_tag="VGA78_03675"
     CDS             681..1070
                     /locus_tag="VGA78_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892994.1"
                     /translation="MPAKHSKRKGDARGVEVETARNLILALPGITEGRSYGFPSFLLE
                     GRFFARFRDDDTVLVLQLGTITDREVLMQLDPRACFFTEHYRNSPAVLIRLAEVARPM
                     LADALKVAWEEVSAQRARRPHRTRPRR"
     gene            complement(1028..1489)
                     /locus_tag="VGA78_03680"
     CDS             complement(1028..1489)
                     /locus_tag="VGA78_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892995.1"
                     /translation="MADRIGLEEQVRFFVMDGLRQATPGVNLVSATPVTAGCRMIQSA
                     AELALMQRASDITIAAFKAAFATLREGMTPYDLENNILHRSIRSGLAASIARTSVSRT
                     GCRIPPSAAATEYGLEVRARMVPPDRMINLRGGAADRVQRRGRVRCGRRAR"
     gene            1525..1692
                     /locus_tag="VGA78_03685"
     CDS             1525..1692
                     /locus_tag="VGA78_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9892996.1"
                     /translation="MGLSSSSQARMSVPKRISSGARASSNAGQTQATSPSAGSTMTNV
                     CSEGHHRTPLW"
     gene            complement(1936..>2269)
                     /locus_tag="VGA78_03690"
     CDS             complement(1936..>2269)
                     /locus_tag="VGA78_03690"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEX9892997.1"
                     /translation="AARIGVDVNLQTGRWSFEQAVRYFMEAGGLDREAAEGEAAGAAA
                     SPSQKIGYMVGKWQIMRLLGRYRDQQGGSFRLGEFHDRLISYGSLPLSVIEWLLLDDE
                     SAVRQVLR"
BASE COUNT          383 a          762 c          759 g          365 t
ORIGIN      
        1 gggctgccgg acgaggcgat cgcgagcgcc atggaccagc tcacccggga ccactccacc
       61 atgagcctgg tcgcggccaa tcgggaggtg tggcacctgc tccgggacgg ggtcccggtg
      121 acggttcacg atccggacca cggcggccag cgcgatgagc ggacccgggt gatggattgg
      181 gagcaccccc gcgacaacga tttcctggcg gtgaaccagc tcaccgtgac cggggtcctc
      241 tacacccgcc ggcccgacat cgtgggattc gtgaacggcc taccgctggt ggacctggag
      301 ttcaagaagc ccggggtgcc ggcccgtgcc gccttcgacg acaacatcac cacctgcaag
      361 tcggacatcc cgcagctctt ctggaccaac accctgctga tcgcttcgaa tggcaccgat
      421 ggccgagtcg gatcggggcg gggtatccag cgaattgagg tggacccgaa cccgggcccg
      481 gtggggctgg tacacgctgc cgtcgagcag cggcgagccg acctcgatcc ggatggtgtc
      541 ggcgggggga accgccacgg gaccgagtgc aaagaggaat gtcagggtca gcgtcatccc
      601 ggggtctcca gcgtggcggt gggagggtgt cgtcgcaatc atacggggca gactgcaccg
      661 aagattctct cgagggaccc atgcctgcca agcactccaa acgcaagggc gacgcacgcg
      721 gggtcgaggt cgagaccgcg cggaacctga tcctggcgct gccggggatc accgagggcc
      781 ggtcatacgg gttcccctcg ttcctgctgg aaggccggtt cttcgcccgg ttccgggatg
      841 atgacacggt gctggtgctc cagctcggga ccatcaccga ccgggaagtc ctgatgcagc
      901 tcgatccgcg ggcctgcttc ttcaccgaac actaccggaa ttctcccgcg gtgctcattc
      961 ggctggccga ggtcgcgcgt cccatgctgg cggatgccct gaaagtggcg tgggaggagg
     1021 tgtcggctca gcgggcccgc cggccgcacc gtactcgccc ccggcgctga acccgatcag
     1081 ccgcgccccc ccgcaggttg atcatccggt cgggtggcac cattctagcg cggacttcca
     1141 ggccatactc agtagccgcc gccgatgggg gaattctgca gcccgttctc gatacgctgg
     1201 tcctcgcgat cgatgcggcc aatcctgacc tgatcgaacg gtgtagtatg ttgttttcga
     1261 ggtcgtacgg cgtcatcccc tcccgcagcg tcgcgaaggc cgccttgaaa gcagcgatgg
     1321 tgatgtcgct cgcccgctgc atcagcgcca gttcggcggc cgattggatc atgcggcagc
     1381 cggcggtgac cggtgtggcg gaaaccaggt tgacgccggg agtggcctgg cggagtccgt
     1441 ccatcacaaa gaaccggacc tgctcttcca ggccaatccg gtccgccatc ctccggtcct
     1501 tgaaaatgcc ggcaatgaga tgaaatgggg ctctcgtcct cctcccaggc ccggatgtcg
     1561 gtgccgaaac ggatcagctc cggggctcgg gcttcctcga acgcgggaca gacccaggcc
     1621 acctcaccct cggccggcag caccatgacg aacgtctgct cggagggcca ccaccggacg
     1681 ccgctgtggt aaagccgctg agccttagcg atccgggtcg ctcgttctcc gtcggcaatc
     1741 ggaacgactc cgccggtcat caagctgagc gattggatcg gggcggggaa attacgggga
     1801 tcggtggtcg acgaggccgg gaaccccacc cttcacgcca ggggcgccga ggacgccggt
     1861 gagaccggcg gcgaagtcgc ggcgggtgag atccattgag gacacctccg tcagctggtt
     1921 ggcatcagcg gcggctcagc ggagcacctg acgcaccgcc gattcatcgt cgagtagcag
     1981 ccactcgatc acggagagcg gcagactgcc gtagctgatc aggcgatcgt ggaactcacc
     2041 cagccggaag ctgccgccct gctggtcgcg gtagcggccc agcagccgca taatctgcca
     2101 cttgcccacc atgtagccga tcttctgcga ggggctggcc gcggcacccg cggcctcgcc
     2161 ttccgcggcc tcgcggtcga gcccgcccgc ctccatgaaa taccgtaccg cctgctcgaa
     2221 gctccagcgg ccggtctgca ggttcacgtc cacgccgatc cgggccgcg
//
LOCUS       DASWKS010000119         6649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2278720, whole genome shotgun sequence.
ACCESSION   DASWKS010000119 DASWKS010000000
VERSION     DASWKS010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2278720"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VGA78_03695"
     CDS             complement(<1..265)
                     /locus_tag="VGA78_03695"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEX9892998.1"
                     /translation="MVLGVLVVALIAAPPVGDPACVTSASAASLAKRASPLDSVSFSV
                     GASRVKICYGRPSARGRTMIGGQNVPLGRLWRTGANEPTMIHTT"
     gene            complement(366..860)
                     /gene="purE"
                     /locus_tag="VGA78_03700"
     CDS             complement(366..860)
                     /gene="purE"
                     /locus_tag="VGA78_03700"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEX9892999.1"
                     /translation="MAAPVVGILMGSASDWEVMQQVAKQLSDFDVGWEARVISAHRTP
                     DLADEYASTAAARGLRCIIAGAGGAAHLAGVLAAKTILPVLGVPMPSRHLHGMDSLLA
                     MVQMPAGIPVATFAIGEAGAQNAGLYAVAILALHDPALAERLRTFRAALEAKVRATVL
                     APPA"
     gene            complement(860..3523)
                     /gene="ppdK"
                     /locus_tag="VGA78_03705"
     CDS             complement(860..3523)
                     /gene="ppdK"
                     /locus_tag="VGA78_03705"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEX9893000.1"
                     /translation="MTDSSGQLVYYFGQGRADGTAAMKDVLGGKGAGLAEMTNLGIPV
                     PPGFTISASLCQAYLESDQFPPRLKSQVEQALQRMEAQTGRALGSRERPLLVSVRSGS
                     ALSMPGMMDTILNLGLNHRTVEGLAAESQNPAFAWDSYRRFVQMYGSVVYDVPKKEFS
                     DRLDARRRAQKAARDIDLSAEQMQAMVQEFKDLVAKATGKPFPDDPVAQLWGAITAVF
                     ESWNTRRARDYRALHDIPDSLGTAVNVVTMVFGNMGEDSATGVAFTRNPSTGENTLYG
                     EFLTNAQGEDVVSGARTPEPISALAQKLSPAYTELHRVARTLERHFRDVQDLEFTIER
                     GRLYMLQTRRAQRTGHAAVRIACEMVDEGVISEEEAVARVPPNDLNQLLHPTIDPKAK
                     LDLLTTGLPASPGAASGLVVFNADLAQERGRRGDAVILVRPETSPEDFHGMVASKAIL
                     TARGGMTSHAAVVARGMGIPCIAGAQEVQVDEEGGCFSVNGRSVQQGDWITIDGSTGR
                     VFLGQAGLVPPALGGDFDRLLGWADRFRHLRVRVNADTPADAHRGRDFGAEGIGLCRT
                     EHMFFEGERITAVREMILAQNEAGRKDALAKLLPMQRGDFEGIFRAMEGFPVTIRLLD
                     PPLHEFLPKDDREIEGLAREMGKDPKDIRRFIDALSEVNPMLGLRGCRLGIIYPEITR
                     MQVRAIFEAACTVAGRKGRVQPEVMIPLVAHVHEFRRQALLVREVAEQVFRERQITVP
                     FLLGTMIELPRAALTADEIAREAQFFSFGTNDLTQTAWGLSRDDAGRFLPFYIESGII
                     DDDPFQVLDIAGVGRLMAMAVKLGRETRQDLKLGICGEHGGEPGAISFCEAQKMNYVS
                     CSPFRVPIARLAAAQAALAERGTMMRTRGTL"
     gene            complement(3520..4914)
                     /gene="purF"
                     /locus_tag="VGA78_03710"
     CDS             complement(3520..4914)
                     /gene="purF"
                     /locus_tag="VGA78_03710"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEX9893001.1"
                     /translation="MCGIVGISGVPDAARLAYLGLYALQHRGQESAGIVALDAQGQPR
                     LHRGMGLVSDVFPDTMLKELPGDVAVGHTRYATMGSTVLANAQPLLANYRGGAFAIAH
                     NGNLTNAGRLRQELVAAGSIFNSSSDTETILHLVARSQANDVESQLRDALSRVEGAYS
                     LVVTVGRTMYAIVDGHGFRPLVVGRLGEGVVVASETCALDLLGATLVRELQPGDFVRI
                     AGGEIVPLTPLPKRPVNRCVFELVYFARPDSTVFGESVDRVRRELGRQLAREQPAHTG
                     QVVFSVPDSANAMALGYSEVSGIRLEHGLIRNHYVGRTFINPTQELRVAKVKIKFNPV
                     REVIAGRSIVVVDDSLVRGTTSKGLVQMIRGAGAREVHLRLASPPITGPCHYGIDTPT
                     PEELIASTHSQQEIRDFLGVDSLGYLSLEGMLKAAGRSDRFCHACFSGRYPIPVEDDI
                     VRLRHASPVATSSP"
     gene            complement(4918..>6649)
                     /gene="purL"
                     /locus_tag="VGA78_03715"
     CDS             complement(4918..>6649)
                     /gene="purL"
                     /locus_tag="VGA78_03715"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF002290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEX9893002.1"
                     /translation="NAMCVGLLKERDLIRARARGVGNLLLAVGARTGRDGIHGASFAS
                     EELTARSEQRRPQVQVGDPFTEKLLLEASLELIHGGLIVAIQDMGAAGLTSSSAEMAA
                     RGGVGVELDTSRVPVREPGMTPYEILLSESQERMLVVAEPQRVEEVEAVCAKWELNAA
                     VIGRVTDDGLFRVIHDGTVVAAIPGRRLVDDCPVYHPAAREAAVAKARRNRRPAGQDP
                     NPSDALEQLLDAPSIASKRWVFEQYDSSVQGNTAIAPGGGDAGVFQVPGESFGLAVTV
                     DCNARGVALDPYQGGLAAVAEAARNLACVGAQPLGITDCLNFGNPEKPEVFFQFREAC
                     RGIADACRAFGTPVTGGNVSFYNESPTGAIDPTPTVGMVGILHDVRRRAASCFTTPGD
                     LVVIAGRTTGHLGGSAYWAEVHQFVGGAPPPVDLDREGRLQRFLIAANQAGLLSSAHD
                     ASDGGLAVALAEACIGSPYAGRCLGARLDLRGYADTIGATSLLFGEDHGRAVMSLPFE
                     RRKTLAALARQHGVPIFGAGRVSGPADPLEIQLVERAWAWDVAHLRRTYMDAIPRRMA
                     AVATSAGEGE"
BASE COUNT         1052 a         2277 c         2304 g         1016 t
ORIGIN      
        1 cggtggtgtg aatcatggtg ggctcgttag ccccggtccg ccacagcctg cccaggggca
       61 cgttctggcc tccgatcatg gtgcgaccgc gggcagaagg ccggccgtag cagattttta
      121 cgcggctggc accgacactg aacgacaccg aatcgagcgg gctggcccgc ttggccagcg
      181 acgcagcgct ggcactggtg acgcaggccg gatcgccaac gggcggggca gctatcaggg
      241 caaccacgag cactccaaga accatgagtc gttcactccc taactgacgc agaacaggac
      301 agaacaggac gggcaggaac cggcccgagt gacgaggtac ctacgcaggg ccgcccatca
      361 gggtgtcacg ccggcggggc gagcacggtg gcgcggacct tggcctcgag ggcggcgcgg
      421 aaggtccgca accgttccgc cagcgccgga tcgtgcaggg ccagaatggc gaccgcgtag
      481 agaccggcgt tctgggcacc cgcttcccca atcgcgaagg tggcgaccgg tattcccgcc
      541 ggcatctgga ccatcgccag gagcgagtcc atcccgtgca ggtgccggct cggcatcgga
      601 acgcccagga ccggcaagat agtcttggcg gcgagcactc ccgccagatg ggccgctccg
      661 cccgctcccg cgatgatgca gcggaggccc cgggcggcgg cggtcgacgc gtattcatcc
      721 gccagatcgg gagtgcgatg ggccgaaatg accctcgctt cccagccgac gtcgaagtcg
      781 gagagctgtt tggccacctg ctgcatcacc tcccagtcgc tcgccgagcc catcagaatt
      841 cccacgaccg gagcggccat cagagggtcc ctcgggtgcg catcatcgtc ccccgttccg
      901 ccagcgccgc ctgggcggcg gccaggcggg cgatgggaac ccggaacggc gagcaggaga
      961 cgtagttcat cttctgggct tcacagaatg aaatggcgcc cggctccccg ccgtgctccc
     1021 cgcagatgcc cagcttgaga tcctgccggg tttctcgtcc cagcttgacg gccatggcca
     1081 tgagccggcc gaccccggcg atgtccagca cctggaatgg gtcgtcgtcg atgatgccgg
     1141 actcgatgta gaaggggagg aaccggccgg catcatcgcg tgacaatccc caggcggtct
     1201 gggtcagatc gttggtgccg aacgagaaga actgggcttc ccgggcgatc tcatccgccg
     1261 tgagggcggc gcggggcagc tcgatcatgg tgccgagcag aaaggggacc gtgatctggc
     1321 gctcgcggaa cacctgttcc gccacttccc ggaccagtag cgcctggcgc cggaactcgt
     1381 gcacgtgcgc caccagtgga atcatcacct cgggctggac ccgtcccttg cgccccgcca
     1441 ccgtgcacgc ggcctcgaag atggcccgca cctgcatccg ggtgatctcg ggatagatga
     1501 tccccaggcg gcagccccgc agccccagca tcgggttcac ctcgctcagg gcgtcgatga
     1561 agcggcggat gtctttgggg tccttgccca tttcacgggc caggccctcg atctcccggt
     1621 cgtctttggg cagaaactcg tgcagcggcg gatcgagcag ccggatagtg acggggaagc
     1681 cctccatcgc ccggaagatc ccttcgaagt cgccccgctg catggggagc agcttggcca
     1741 gggcgtcctt ccggcccgct tcgttctgcg ccaggatcat ctcccggacc gcggtgatcc
     1801 gctcgccttc gaagaacatg tgctcggtgc ggcagagccc gatgccctcg gctccgaaat
     1861 cgcggccccg gtgggcgtcg gccggcgtgt cggcgttgac ccgcactcgg aggtggcgga
     1921 accggtcggc ccagcctaac aggcgatcga aatcgccgcc cagggccggc gggaccagcc
     1981 cggcctggcc caggaagacc cgcccggtac tgccgtcgat ggtgatccag tctccctgtt
     2041 gcaccgagcg gccgttgacg ctgaaacagc cgccctcctc gtcgacctgg acctcctggg
     2101 cgccggcgat gcagggaatg cccatgccgc gggccaccac ggccgcatgg gaggtcatcc
     2161 cgccccgcgc ggtcaggatg gccttggacg cgaccatccc gtggaagtcc tcggggctgg
     2221 tctccgggcg caccaggatc acggcgtcgc cgcggcggcc ccgttcctgg gccaggtcgg
     2281 cattgaacac caccaggccc gacgccgccc ccggcgatgc cggcaggccg gtggtgagca
     2341 ggtccagctt ggccttgggg tcgatggtgg gatggagcag ctggttcaag tcgttgggcg
     2401 gaacccgggc gaccgcctcc tcttccgaga tgacgccctc gtccaccatc tcgcaggcga
     2461 tccggaccgc ggcgtggccg gtgcgctggg cccgccgggt ctgcagcatg tagagccggc
     2521 cccgctcgat ggtgaattcc aggtcctgca cgtcgcggaa atgccgctcc agggtgcgag
     2581 ccacccggtg cagctcggtg taggccggac tcagcttctg agccagcgca ctgatcggct
     2641 ccggagtccg tgccccggag accacgtcct caccctgggc gttggtgagg aactcgccgt
     2701 agagggtgtt ttccccggtc gaaggattgc gggtgaacgc gacgccggtg gcggagtcct
     2761 cacccatgtt gccgaacacc atggtgacca cattgaccgc ggtgcccagg ctgtcgggga
     2821 tgtcgtgcag ggcgcgatag tcgcgcgccc gccgcgtatt ccagctctcg aacactgccg
     2881 ttatggcgcc ccagagctgg gcgaccggat cgtcgggaaa aggcttgccg gtggccttgg
     2941 cgacgaggtc cttgaattcc tggaccatcg cctgcatctg ctccgccgac agatcgatat
     3001 cgcgggcggc cttctgggcc cgacggcggg cgtcgagccg gtcggagaac tctttcttgg
     3061 gaacgtcgta gaccacgctg ccgtacatct ggacgaagcg gcgataggag tcccaggcga
     3121 acgccgggtt ttggctctcc gcggccaggc cttcgaccgt ccggtgattg aggccgagat
     3181 tgaggatcgt atccatcatg cccggcatcg agagggccga gccggagcga acgctgacca
     3241 ggagcgggcg ctcgcgactg ccgagggccc gtccggtttg cgcctccatc cgctgcagcg
     3301 cctgctccac ttgcgatttg aggcggggcg ggaactgatc cgattcgagg tacgcctggc
     3361 acaggctggc cgagatggtg aagccgggtg gaaccggaat accgaggttg gtcatctcgg
     3421 ccaatccggc gcctttgccg cccagcacgt ccttcatcgc ggcggtgccg tcggcccgac
     3481 cttgaccgaa gtagtagacc agctggccgc tggaatccgt catggcgagc tcgtggccac
     3541 gggggacgcg tggcgcagac gcacgatgtc gtcctccacc ggaatgggat accggcccga
     3601 gaagcaggcg tggcagaatc gatccgaccg tccggccgcc ttgagcatcc cctcgaggga
     3661 caggtagcct aacgaatcga ctccgagaaa gtctcggatc tcctgctgcg aatgagtgga
     3721 cgcgatcagc tcttccggcg tgggcgtgtc gatcccgtaa tggcaggggc cggtgatcgg
     3781 gggcgacgcc agccggagat gaacctcgcg ggcgcccgcc ccccggatca tctggaccag
     3841 gcccttgctg gtggtgccgc ggaccaggct gtcgtccacc accacgatcg agcggccggc
     3901 aatcacctcg cgcaccggat tgaacttgat cttcaccttg gcgacccgga gctcctgggt
     3961 gggattgatg aaggtgcgcc ccacatagtg attgcggatg aggccgtgct ccagccggat
     4021 gcccgagacc tccgaatacc ccagcgccat ggcgttggcg gagtcgggga cgctgaagac
     4081 cacctggccg gtgtgggccg gctgctcccg cgccagctgg cgccccagct cgcgccggac
     4141 ccggtccacc gactctccga agaccgtgga gtcgggacgg gcgaagtaga ccagctcgaa
     4201 tacacaacga ttgaccggcc gtttcggcag cggcgtgagc gggacgatct cgccgccggc
     4261 aatgcgcacg aaatcgcccg gctggagttc tcggaccagc gtggctccca gcagatcgag
     4321 ggcgcaggtc tcggaagcga ccaccacccc ctcgcccaga cggcccacca ccaggggacg
     4381 gaagccgtga ccgtcgacga tggcgtacat ggtgcgtccc accgtcacca ccaggctgta
     4441 ggcgccctcg acccgggaca gggcgtcgcg caactgcgac tcgacgtcgt tggcctggga
     4501 ccgggccacc aggtggagga tggtctcggt gtcggaagag gagttgaaga tcgagcctgc
     4561 ggcgaccagt tcttggcgca gccggccggc gttggtcagg ttgccgttat gggcgatggc
     4621 gaaggccccg ccccgatagt tggcgagaag cggctgtgcg ttggccagga cagtgctgcc
     4681 catggtggcg tagcgggtgt ggcccacggc gacatccccc ggcagctcct tgagcatggt
     4741 gtcgggaaag acatcgctca ccaggcccat gccgcggtgg agccggggct ggccctgggc
     4801 gtccagggcg acgatgccgg cgctctcctg gccccggtgc tgcagggcgt acaaccccag
     4861 gtaggccaga cgggccgcgt cgggaacgcc cgagatgccg acaataccgc acatctgcta
     4921 ctctccctca cccgcgctgg tggccaccgc ggccatgcgg cgcggaatcg catccatgta
     4981 ggtccggcgg aggtgggcca catcccaggc ccaggcccgt tccaccagct ggatctccag
     5041 cggatcggcc ggcccgctca cccggccggc gccgaagatc ggtacgccgt gctgccgggc
     5101 gagcgctgcc agcgtcttcc tccgttcaaa tggtagcgac atcaccgccc gtccgtgatc
     5161 ttcgccgaac agcagcgagg tggcgccgat cgtgtcggca tagccgcgca gatccagcct
     5221 ggcccccagg cagcggccgg cgtaggggga gccgatgcag gcctcggcca acgcaaccgc
     5281 caggcccccg tcgctggcat cgtgggcgga ggacaggagt ccggcctgat tggcggcgat
     5341 gaggaaccgc tgcagccgtc cttcccgatc caggtcgacc gggggtggcg cgcccccgac
     5401 gaactggtgc acttcggccc agtaggccga cccgcccagg tgcccggtgg tccgtcccgc
     5461 gatcacgacc aggtcccccg gggtagtgaa gcagctggcg gcccggcgcc gcacgtcgtg
     5521 caggatgccg accatgccga ccgtgggggt gggatcgatc gcgccggtgg gactttcgtt
     5581 atagaaggag acgttccccc cggtcaccgg cgtgccgaag gcgcggcagg catcggcgat
     5641 gccgcgacag gcctcgcgga actggaagaa cacctccggc ttctcgggat tgccgaagtt
     5701 gaggcagtcg gtgatgccta atggctgggc gccgacgcag gcgaggttgc gggcggcttc
     5761 ggccacggcg gccaggcctc cctggtaggg atcgagcgcg accccgcggg cgttgcagtc
     5821 gaccgtgacg gccagaccga aggattcccc gggcacctga aacacgccgg cgtccccgcc
     5881 gccgggggcg atggcggtgt tgccctgcac gctgctgtcg tactgctcga acacccagcg
     5941 tttgctggcg atcgagggcg cgtcgagcag ctgttccagc gcgtcggacg gattggggtc
     6001 ctggccggcc ggccgccggt tgcggcgtgc cttcgcgacg gcggcttccc gcgcggccgg
     6061 gtggtagacc gggcagtcat ccaccaggcg ccgtcccggg atggccgcga ccaccgtccc
     6121 gtcgtggatg acccggaaga gcccgtcgtc ggtgacccgg ccgatcacgg ccgcgttgag
     6181 ctcccacttg gcgcagaccg cctccacctc ttccacccgc tgcggctccg ccaccaccag
     6241 catccgttcc tgggactccg acagcaggat ctcataaggc gtcatgccgg gctcgcgcac
     6301 cgggacgcgc gaggtatcga gctccacccc cacgccgccc cgggccgcca tctcggccga
     6361 ggagctggtg agtcccgccg cccccatgtc ctggatggcg acgatcaggc cgccgtggat
     6421 caactccaga ctggcctcga gcaggagctt ctcggtgaag ggatcgccca cctgcacctg
     6481 gggccgccgc tgttcgctcc gggcagtgag ctcttccgag gcgaagctgg cgccgtgaat
     6541 gccatcgcgg ccggtccgcg cgccgacggc gaggagcagg ttgccgaccc cgcgggcccg
     6601 ggcccggatc aggtcgcgct ccttgagcag gccgacgcac atggcgttc
//
LOCUS       DASWKS010000120         6400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_423579, whole genome shotgun sequence.
ACCESSION   DASWKS010000120 DASWKS010000000
VERSION     DASWKS010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6400
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423579"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..986
                     /locus_tag="VGA78_03720"
     CDS             <1..986
                     /locus_tag="VGA78_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893003.1"
                     /translation="PRNPAPWRQIAYLADQVGDSAAASGFFRRVASLDTSSTNRHSDR
                     TAHLLWGEHFPEAERAYNARLAVGVSRSERIDLLWSRMLAQAQQGRFRASLETATELR
                     RDVASAGHAEREGHPLAITVGLGEAQALRQNGRLGEAAARFDSLARFDLATSPPARRA
                     TTRIWTLTHLASTLAEVGDTARLGSIAGQMDSLKVLSGAIRDWKSPHYVRGLLESARG
                     NHPAAYGEFAQASSIAGDGFTMPVVERARMSLQLGRPREAVTLLQRTLLSSYHFYVTH
                     AELHAALAEAWAAARNRDSARVHLAAVERAWVQADPAVRARLAQLHDRLGF"
     gene            complement(1022..2494)
                     /gene="ahcY"
                     /locus_tag="VGA78_03725"
     CDS             complement(1022..2494)
                     /gene="ahcY"
                     /locus_tag="VGA78_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX9893004.1"
                     /translation="MSTTLASARKAGRAPFKVKDLTLAELGRKEIRLAEHEMPGLMAL
                     RQEYQGKQPLAGARIMGSLHMTVQTAVLIETLVDLGADVRWVSCNIFSTQDQAAAAVV
                     VGPEGSAAIPQGTPVFAWKGETLEEYWWCTEQALLWPDGTGPTLLLDDGGDATLLVHK
                     GVEFEHSGQVPVFDPATDPEEWGVILDLLRRSLAQDPKRFTHVAAAIRGVSEETTTGV
                     RRLYEMMRAGTLLFPAINVNDSVTKSKFDNIYGCRHSVIDGLNRATDVMLAGKLAVVC
                     GYGEVGKGCAQALRGQGARVVITEIDPICALQAAMEGFQVTTLDEVLHSADVFITATG
                     NFNIITADHMGRMKDKAIVGNIGHFDNEIDMAGLKKVPGIRRVTIRPQYDEWVFADGH
                     SVLVLAEGRLLNLGCATGHPSFVMSASFTNQVMAQIELHQNAGRYQREVYILPKELDE
                     KVARLHLDKLGVKLTELTPEQAKYIGVPPQGPYKPEHYRY"
     gene            complement(2506..3435)
                     /locus_tag="VGA78_03730"
     CDS             complement(2506..3435)
                     /locus_tag="VGA78_03730"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9893005.1"
                     /translation="MIIAQLTALSDPTRARLLIALEEHELSVRELQETLQLPQSTVSR
                     HLRILVEEDWVAARSDGASHRYRFAGAAAGSPRDRLWALVREEVGASRAAQADTRRIR
                     AVLAQRQTRSRQFFASEAGQWDRLRQDLFGRRYELEALLALLDPGWVIGDLGCGTGGF
                     AAALAPFVRKVIAVDESAPMLDAARGRLASLPNVELRQGELELLPVNEDELDAAAMLL
                     VLPYVPDPGRVLGEAARAVQPGGRIVILDLQPHDRSDWEQTMGHLWRGFSQGQMLGWI
                     NGAGFREARYIALPPVPEAKGPGLFVATARKPG"
     gene            3768..4217
                     /gene="mscL"
                     /locus_tag="VGA78_03735"
     CDS             3768..4217
                     /gene="mscL"
                     /locus_tag="VGA78_03735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEX9893006.1"
                     /translation="MLKEFREFIMRGNVLDLAVGIIIGAAFGGIVKSLVDDVIMPPIG
                     LALGQVDFKQLYVLLKEGATPAPYPSMAAAKGAGAVTLNYGLFINNIINFLIVGFAIF
                     LVVRVANRLQRQPAAAPPSTKECPYCKSNIPLGAIRCPQCTSEVRAA"
     gene            4214..4939
                     /locus_tag="VGA78_03740"
     CDS             4214..4939
                     /locus_tag="VGA78_03740"
                     /inference="COORDINATES: protein motif:HMM:NF016241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HEX9893007.1"
                     /translation="MRAALILGFAVSLAAPARAQDSLPKRFKVAGDLSFVNTGGNSDV
                     TTLGLGEKIEWMTSPRFTLKQELRWVYGEDSGEENANALLTDLRGEYGLTSRVSLFAG
                     VTYDYNLFAGVKRHFAEYTGLGFLVLDRPKDKVRLDAGLSLNQEWEINRDEADNFPSG
                     RLGGDYRHAFSEKAYLQQILEFIPNFDTSSDYRLNTETALVAPITGGIAIKVGYIVRY
                     RGEPPEGFNTTDTLFRTGIQISN"
     gene            5118..>6400
                     /locus_tag="VGA78_03745"
     CDS             5118..>6400
                     /locus_tag="VGA78_03745"
                     /inference="COORDINATES: protein motif:HMM:NF039196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX9893008.1"
                     /translation="MTRITRPRLPASASPGMDDTAMVRRELLRALQQVRSGDFGVQLP
                     STWTGVDGKIADTFNEIVSANRKMADELKRVGNVVGKEGRTRERVRFDHTKGAWGEME
                     ASVNSLTDDLLRPTTEVTGAIAAVAQGNLNQTLRLDVDGRPLEGEFLRSAMIVNTMIQ
                     QLSVFTSEVTRVAREVGSDGKLGGQAVVPGVSGVWKDLTDSVNSMASNLTAQVRNISE
                     VTVAVASGDLSRKITVDVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTEGKLGG
                     QAVVPGVAGTWKDLTDSVNAMAGNLTAQVRNIAEVTTAVARGDLSRKITVDVRGEILE
                     LKDTINTMVDQLNAFAGEVTRVAREVGTEGELGGQAKVPGVGGTWKDLTDNVNRMASN
                     LTAQVRNIAEVATAIARGDLSKKITVNVSGEILGL"
BASE COUNT         1111 a         2132 c         2119 g         1038 t
ORIGIN      
        1 agcccaggaa cccggccccc tggcgtcaga ttgcctatct cgccgaccag gtcggagaca
       61 gcgcggcggc gtccggcttt tttcggcgag tcgcatcgct ggacaccagc tccaccaacc
      121 gccattcgga tcgtaccgca catctgttgt ggggggagca tttcccggag gcggagcggg
      181 cctataacgc gcggctcgcg gtcggggtca gccggtcgga gcggatcgac ctgttatgga
      241 gtcggatgct ggcgcaggcg cagcagggcc ggtttcgggc gtcgctggag accgcgaccg
      301 agcttcggcg cgatgtcgcc tcagcaggcc acgccgagcg cgaaggtcac ccgctggcga
      361 taacagtcgg cctgggcgaa gcgcaggcct tgcggcaaaa cggacgcctg ggcgaagccg
      421 ccgcgcggtt cgattccttg gcccgcttcg atctggccac cagcccgccg gcccgccggg
      481 cgaccacccg gatctggact ctgacccacc tcgccagcac gctggctgag gtgggtgaca
      541 cggctcggtt ggggagcatt gccgggcaga tggattcact caaagtcctg agtggcgcaa
      601 tccgggactg gaagtcgccc cactacgtac gcgggctgct ggaatcggcg cgagggaacc
      661 acccggccgc ctatggggag tttgcgcagg ccagcagcat tgccggcgat gggtttacca
      721 tgccggtagt ggagcgggcc cgaatgtcgc tccagctggg ccgcccccgc gaggcggtca
      781 ccctgctgca acggaccctg ctcagctcct accacttcta cgtcacccac gcggagctgc
      841 acgcggccct ggccgaagcg tgggctgccg cccggaatcg ggatagcgct cgagtgcacc
      901 tcgcggcggt ggagcgggcc tgggtccagg ccgaccccgc agtgcgggcc cggctggcgc
      961 agctgcatga ccggctggga ttctagcggg ggtggggagc ccgagggccc cccgtgattg
     1021 cctaatagcg atagtgctcc ggcttgtagg gaccctgcgg cggcaccccg atgtacttcg
     1081 cctgctcggg cgtcagctcc gtcagtttca cgcccagctt gtccaggtgg agtcgcgcca
     1141 ccttctcatc cagctccttg gggaggatgt acacctcgcg ctggtagcgg ccggcgttct
     1201 ggtgcagctc gatctgcgcc atcacctgat tggtgaagct ggccgacatc acgaagctgg
     1261 gatggccggt cgcgcacccc aggttgagca accgtccctc ggctaggacc agcacgctgt
     1321 gcccgtcggc gaacacccac tcatcgtact gcggccggat ggtcacccgc cggatccccg
     1381 gcaccttctt gagcccggcc atatcgatct cgttgtcgaa gtgaccgatg ttgccgacga
     1441 tcgccttgtc cttcattcgc cccatgtggt cggcggtgat gatgttgaag ttgccggtgg
     1501 cggtgatgaa gacgtcggcg ctgtgcagca cctcgtccag ggtggtgacc tggaaccctt
     1561 ccatcgccgc ctggagggcg cagatggggt cgatctccgt gatcacgacc cgggccccct
     1621 ggccccggag cgcctgcgcg cagcccttgc cgacctcacc gtagccgcag accaccgcca
     1681 gcttgccggc gagcatcacg tcggtggccc ggttgagccc gtcgatcacc gaatggcggc
     1741 agccgtagat gttgtcgaac ttcgacttgg tcaccgagtc gttcacgttg atggccggga
     1801 agagcagggt gcccgcccgc atcatctcat agagccggcg caccccggtg gtggtttcct
     1861 ccgagacgcc ccggatggcg gccgcgacat gggtgaaccg cttggggtcc tgtgccagag
     1921 acctccgcag caggtcgagg atcacacccc attcctccgg gtcggtggcg ggatcgaaga
     1981 cgggcacctg gccgctgtgc tcgaactcca cacccttgtg caccagcagc gtcgcgtcgc
     2041 cgccgtcgtc cagcagcaag gtgggaccgg tcccgtcggg ccagagcagg gcctgttcgg
     2101 tgcaccacca gtactcctcg agggtctcgc ccttccaggc gaacaccggc gtaccctggg
     2161 ggatcgccgc gctgccttcc gggcccacca ccacggcggc ggcggcctgg tcctgggtcg
     2221 agaagatgtt gcaggagacc cagcgcacgt cggccccgag gtccaccagg gtctcgatca
     2281 gcacggcagt ctgcaccgtc atgtggagcg agcccatgat ccgcgccccc gccagcggct
     2341 gcttcccctg gtactcctgc cggagtgcca tcagtcccgg catctcgtgc tcggccagcc
     2401 ggatctcctt gcgtcccaac tcggccagcg tcagatcctt gaccttgaac ggggcgcgtc
     2461 cggccttccg ggccgatgcg agagtcgtgc tcatcgaagt gctccttacc cgggttttct
     2521 ggccgtggcc acgaacagcc ccggcccttt tgcttcgggc acgggcggca acgcgatata
     2581 acgcgcctcc ctgaaacccg ctccgttgat ccagcccagc atctgtccct ggctgaaacc
     2641 gcgccagaga tgccccatgg tctgctccca gtcactgcga tcgtgcggtt ggagatcgag
     2701 gatcactatc cgcccgcccg gttggaccgc gcgcgccgcc tcgcccagga cccgacccgg
     2761 atccggaaca tagggcagaa ccagcagcat cgcagccgca tcgagctcgt cttcgttgac
     2821 cggaagcagc tccagttccc cttgccgcag ctccacgttg ggcagggacg cgagccgccc
     2881 ccgggccgcg tccagcatgg gcgctgattc atccaccgcg atgaccttcc ggacgaaagg
     2941 cgccaacgcc gccgcgaagc cgccggtgcc gcagcccaga tcgccgataa cccagccggg
     3001 gtcgagcaag gccaggagcg cctcgagctc gtaacgccgg ccgaacaggt cctggcgcag
     3061 ccggtcccac tggcctgcct cgctggcgaa gaactgccgc gaccgggtct ggcgttgggc
     3121 caggaccgcc cggatccgcc gggtgtcagc ttgggcggcc cgcgaggcac cgacctcttc
     3181 ccggaccagg gcccagagcc gatcccgagg cgagcccgcc gccgccccgg caaaccggta
     3241 ccgatggctg gccccatcgg accgggcggc cacccagtcc tcctcgacca gaatccgcag
     3301 gtgccggctc acggtcgact gcggaagttg aagtgtttct tggagttccc gcactgacag
     3361 ctcgtgctcc tccagggcga tgaggagcct ggcccgggtc gggtcggaaa gggcggtgag
     3421 ctgggcaata atcatcatat catccggatg ataggattat aaccttcaac aacgggaggc
     3481 gggagggggg accaaaaccg ggagcaggga gcagggagca ggaaccagga agcagggagc
     3541 agggagcagg gagcagggag caggaagcag gcagcaggaa gcaggcagca gggagcagga
     3601 agcagtagcg gcggggccga agcgcgatcc cgagtacgat gcgtctcccg cctcccccgc
     3661 tcccttctcc ctgctccctg ctccctgctc cctgctccct gctccctgct ctagactgag
     3721 attgttggac tggtcattgt tcggtccccc acccgtccga ggcggtcatg ctcaaggaat
     3781 tccgcgaatt catcatgcgc gggaacgtgc tggatctggc ggtcggtatc atcatcgggg
     3841 ccgcgttcgg tggcatcgtc aagtcgctgg tcgacgacgt catcatgccg cccatcggtc
     3901 tggcgctggg ccaggtggac ttcaagcagt tgtacgtgtt gttgaaggaa ggggccacgc
     3961 cggcacccta cccgtccatg gcggcggcca aaggggccgg ggcggtcacg ctcaactacg
     4021 gtctgttcat caacaacatc atcaacttcc tgatcgtggg cttcgcgatc ttcctggtgg
     4081 tgcgggtggc caaccgattg caaaggcagc cggcagcggc gccgccctcc accaaggagt
     4141 gtccctactg caagtccaac attccgctgg gagccatccg ctgcccccag tgcacgtccg
     4201 aggtacgggc cgcatgagag ccgcgctgat cctgggattc gcggtgtccc tggcggcgcc
     4261 ggcccgggcg caggactctc tgcccaagcg gttcaaggtt gccggggacc tcagtttcgt
     4321 gaacaccggc ggcaacagtg acgtcacgac cctgggcctg ggcgaaaaga tcgagtggat
     4381 gaccagcccg cgcttcaccc tcaagcagga gctccggtgg gtctacggcg aggacagcgg
     4441 cgaggagaac gccaacgcgt tgttgaccga tctccgggga gaatacgggc tcaccagccg
     4501 ggtgagcctg tttgccgggg taacctatga ctacaatctc ttcgccggcg tcaagcggca
     4561 ctttgcggag tacaccggtc tggggtttct ggtgctggac cggccgaaag acaaggtcag
     4621 attggacgcc ggtctctcgc tcaatcagga gtgggagatc aaccgggacg aagccgacaa
     4681 ctttccctcc ggccgattgg ggggcgacta ccggcacgcc ttttcggaga aagcctacct
     4741 ccagcagatc ctggagttca tcccgaactt cgacacgtcc agtgattacc ggttgaacac
     4801 ggagaccgct ctggtggcgc cgatcaccgg cggcatcgcg atcaaggtgg gatacatcgt
     4861 gcgctaccgg ggcgaaccac ccgaggggtt caacaccacg gacaccttgt tccgaaccgg
     4921 aatccagatc agcaactgat ccggtcttcc cgctgtggaa gcagcgtggt tgcaccaaaa
     4981 cggagcagcc ggctgcgcct cgctctgatt ggcttgcccg ttcatccagc cccaccgata
     5041 gttcgtttct cgtgctacgc cccacctgcc tggcaggtgg aagcactcgt ttcaactggg
     5101 ctttccgagg tcccacaatg acccgaatca cccggccccg tcttcccgca tcggccagcc
     5161 ccggaatgga tgacaccgcc atggtccggc gcgagctgct ccgcgcgctg caacaagtgc
     5221 ggagcggcga ttttggcgtt cagctgccca gcacctggac cggcgtcgac ggaaagatcg
     5281 cggacacctt caacgagatc gtgtcggcca accgcaagat ggccgacgag ctcaagcggg
     5341 tggggaacgt ggtcggtaag gaaggacgga cccgggagcg ggtccgcttc gatcatacca
     5401 aaggcgcctg gggcgagatg gaagcctcgg tcaacagtct gaccgacgat ctgctgcgtc
     5461 ccacgaccga agtcaccggg gccatcgccg ccgtggcgca gggcaacctc aaccagaccc
     5521 tccggctgga cgtcgacggc cggccgctcg aaggcgagtt cctccgttcg gccatgatcg
     5581 tcaacaccat gatccagcaa ctgagcgtgt tcacgtccga agtgacccgg gtggcccggg
     5641 aagtgggttc cgacggcaag ctgggcggtc aggccgtcgt gccgggggtg agcggcgtgt
     5701 ggaaagacct gaccgacagt gtcaactcga tggcgagcaa tctgacggcc caggtccgca
     5761 acatctccga ggtcacggtg gcggtcgcca gcggcgacct gtcccgcaag atcacggtcg
     5821 acgtgcgggg agagatcctg cagctcaagg aagccatcaa caccatggtg gaccagctcc
     5881 gttccttcgc gtcggaggtc acccgggtgg cgcgggaagt cggtaccgaa ggcaaactgg
     5941 gcgggcaggc ggtggtgccg ggggtggcgg ggacctggaa ggatctcacc gacagcgtca
     6001 acgccatggc cggcaacttg acggcccagg tgcggaatat cgccgaagtc accactgcgg
     6061 tggcccgggg cgacctctcc cgcaagatca cggtggatgt gcggggcgaa atcctggagc
     6121 tcaaggacac catcaacacg atggtggatc agctcaacgc cttcgccggg gaagtgaccc
     6181 gggtggcgcg cgaggtcggc accgaaggcg agctgggcgg ccaggccaag gtgcccggcg
     6241 tgggcggcac ctggaaagac ctcaccgaca acgtcaaccg gatggcgagc aacctcaccg
     6301 cccaggtgcg gaacatcgcc gaggtggcca ccgccatcgc ccgaggggat ctctccaaga
     6361 agatcacggt gaacgtgagc ggcgaaatcc tgggcctcaa
//
LOCUS       DASWKS010000121         7572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2642751, whole genome shotgun sequence.
ACCESSION   DASWKS010000121 DASWKS010000000
VERSION     DASWKS010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7572
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2642751"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2455
                     /locus_tag="VGA78_03750"
     CDS             <1..2455
                     /locus_tag="VGA78_03750"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX9893009.1"
                     /translation="TATVFLPRVQILAAGSLGWTRPHGGTMEVSIAAERLLAFDSLLT
                     TLSGAGPDSSEHPDPLDGNLSAKLTLQGALDSLEVAAGGSGTDVRWRGISLTSIDGAM
                     TMTRHSAPRFDIQLRADTVTRGHVQFTGLAFRSSGLADSMRWEVQGNGGRFLSLEARG
                     LLARRDTTRLDVEDLRLRMRNGLWRPAAPFSVTLSDSVWSFPGVSLETSDGSAQLRLD
                     GTLPGRGPGELDVTVSGLDLRDVYALLQRDTSHVRGTLLMDLRVAGTAADPTIRGTGN
                     LTGPVFGDFRAPLTRIALNYQRRRLDANLTLWRTGTSLMNVGATLPLDLSWSGDRTGP
                     RQLPGQLAIRAQADSMNLAVVEAFTRNLRQVRGFLTADVAVQGTWDQPRLGGTVEVVE
                     GTAVVPNLGVRYGPVNGHITMSGDSLVIDTLEIGGREGRLVATGYTRLENLTRPVLGL
                     DFRAYDFVVMDVPDFLRIQADGNLRLRGPLFHATMTGQATMRNSVVYFADLVTKSIVN
                     LEDPLFADLVDTASIRQRRLGAAFQSRFLDSLTISDFEFQAAEGVWLRSNEANIQLEG
                     RVIVGKRRGLYNLTGEFNAVRGTYNLKLLAITRAFDVTRGRVRYVGDADLNADLDIEA
                     RHLLRPAEAQGASRDIEVTARIGGRLRAPTLALESNIRPPLSQSDLISLLILRSTRSQ
                     LASPGQSQQAAQVASLLLSTLTSEIESRLLDEGGPDLLEIRPGVSFGVAGQSTLSRLS
                     AGWQLGNRWFVSLTTGFCQDFQQFDYRNFGASLDYRLGRHASLSVSAEPYQTCLAGAT
                     GVATKRYQFGSDLRWEREF"
     gene            2455..3354
                     /locus_tag="VGA78_03755"
     CDS             2455..3354
                     /locus_tag="VGA78_03755"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX9893010.1"
                     /translation="MARAVLITNPAAARTTHASVRAVSDVLHRAGWTLEVLATSGPGD
                     ASRIAAYAVEAGAEVVAVQGGDGTTMQAASALVGTNVALGLVPGGTGNLLAGNLRIPR
                     SVTRAARALVDGRRRRIDLGRVDQAHGGAYFSVACGAGIDARVMGETASELKRRWGIG
                     AYMATTLRVLPQMGSFQALVTVDGVEYEAEAAMILVANCGEVIPPFVRLGHGITPEDG
                     LLDVVVVRGKNVWDSMRALWHVLRDLPGASGEGTFIGYARGKVIRIETDVPQPVELDG
                     DADGHTPFMAEVVPGAIAVVVPK"
     gene            3386..4729
                     /locus_tag="VGA78_03760"
     CDS             3386..4729
                     /locus_tag="VGA78_03760"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9893011.1"
                     /translation="MSDAILLIDDDAVALRGLGGHLEQRGFEVARELDGAGALTACDR
                     LEPDVAILDLGLTPANGEDLLVLLKQRGVAVIGLLEADDESAVVEAYRRGADQVLVRP
                     GDAAVLAAAAQRIAEISRLRRAAEVVMSPPEGLTLESLGTSSTMRAVGQQIAALAQSD
                     RTTVLIIGEHGVGKAWAARLIHDLGARIREPFLQAWCTGTSGVALETRLFGYERGAVL
                     DGKRRVRGLLELAGRGTLLLREIGAMPLELQPVLLRVLESRTFRRVGGQRDVPAHARI
                     IVTSTHDLSQEVELNHFRGDLYYRLNTMVLTIPPLRERSDADRLMLVQGIHASLASRL
                     PEPPPPLAPESMERLMTHNWPGNIQELVAVLERSALMARGQPAVLVEHLPGEFRARPG
                     LGDRRHTPMSLEELERLHIDRTLRFHGGNRTRAAKELRISRATLINKIKRYAITE"
     gene            4935..5708
                     /locus_tag="VGA78_03765"
     CDS             4935..5708
                     /locus_tag="VGA78_03765"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEX9893012.1"
                     /translation="MNAVLATAAIAPVLREPTVRSEQVTQLVLGEPAMIHGQSGDWLE
                     VETVIDRYPGWIHRGYLRELPRDDADAWLAGAAWSDGAEATVSGARVQLPLRARVQRT
                     EDAIQLPDGREGMVARGTVADLEFLRSSARQMRPDQWVIRKFTGSPYLWGGVTPWGVD
                     CSALVQTAWLARGTTLPRDASLQAREGIEVNRDRIQPGDLLFFADGDTPNRITHVSIA
                     GERDTVVHATLRRGGVVVERLADLGWLMEKLVAVRRILD"
     gene            5751..6449
                     /locus_tag="VGA78_03770"
     CDS             5751..6449
                     /locus_tag="VGA78_03770"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEX9893013.1"
                     /translation="MIRKLVLFDIDGTLLLSLGAGRRALVAAMGAELEQAEAVAAAVR
                     FDGKTDPQIVREMFGAAGEPAVDDARIDSVLERYIECLREQLAQPGHRTEVMPGVPDL
                     LDRVESEAVALLGLLTGNVATGAELKLRSGAIDPRRFRVGAFGSDHAVRSELPAIAAG
                     RAESLFGRRPQGEEIVIIGDTPSDMICGLAVGARSIGVATGAYSAAELSRAGAYAAFD
                     DLSDQNAVWQAISA"
     gene            6446..7138
                     /locus_tag="VGA78_03775"
     CDS             6446..7138
                     /locus_tag="VGA78_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893014.1"
                     /translation="MNAVIGSVPELGPLLGRFSSPAARGPEALPLDDLRRNLLGLLYQ
                     QGSAARRELTAGRPEGARVQLALSAWLALWTDAVKATADRLLGEIDRRIELAGAQSRF
                     PERRLALAKPSEEDRRVVRARLAAAGIPLERVSPPEQASDWPDGLLRVAMALDASWER
                     LERVVTDELLVWQRDVDRVRAWRRPTGPLWAITVAVLLLALLLGLSVGGYLPAPGPLR
                     LLQQWFWSLSWP"
     gene            7129..7530
                     /gene="acpS"
                     /locus_tag="VGA78_03780"
     CDS             7129..7530
                     /gene="acpS"
                     /locus_tag="VGA78_03780"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEX9893015.1"
                     /translation="MAVIGIGIDVVDLVRAQRLLLRHGSRVLERFLLPGEREYVTAKD
                     DPARHFAVRVAAKEAVYKAFQTIPGAEAISWQDIEVERTVGGRPHVRLHGRAAELAGN
                     LGRWRLHLSLTHTDQTAAASAVLEADSSIAD"
BASE COUNT         1146 a         2548 c         2635 g         1243 t
ORIGIN      
        1 caccgccacc gtttttctcc cccgggtgca gatcctggcc gccggctcgc tggggtggac
       61 ccggccccac gggggaacca tggaggtctc gatcgccgcc gagcggctgc tggcgttcga
      121 ttccctcctg accacgctct ccggtgccgg tcccgattcc tcggagcatc ccgatccgct
      181 ggacggcaat ctctcggcca agctcaccct ccagggggcg ctcgattcgc tggaggttgc
      241 ggccggcggc agcggcaccg acgtgcgctg gagaggcatc agcctaacca gcattgatgg
      301 cgccatgacc atgacccgtc actcggcgcc ccgtttcgat attcagctgc gggcggacac
      361 ggtgacccgg ggccacgtcc agttcaccgg gctcgccttt cgctcgtccg gcctggccga
      421 ctcgatgcgg tgggaagtgc aagggaacgg cggacgcttt ctgagcctcg aggccagggg
      481 cctgctcgcg cgacgcgaca cgacccggct cgatgtcgag gaccttcgct tgcggatgcg
      541 gaacgggctc tggcggccgg cggcgccgtt ttcggtgacg ctgagcgaca gcgtctggtc
      601 cttccccggc gtgagtctcg aaaccagcga cggctcggcc cagctccggc tcgacgggac
      661 gttgccgggt cgggggccgg gcgagctcga cgtcactgta tcgggtctcg acctgcgtga
      721 cgtctacgcg ctgctgcagc gcgacacgtc ccatgtgcgc ggcacgctcc tcatggatct
      781 ccgcgtggcc ggcaccgcgg ccgatccgac gatccggggg accggtaacc tgaccggtcc
      841 ggtcttcggg gatttccggg cgccgctcac ccggatcgcg ctcaattacc aacgccgccg
      901 gctggacgcc aacctcaccc tgtggcgcac cgggacgtcg ctcatgaacg tgggcgccac
      961 gctcccgttg gacctctcct ggtcgggcga ccggaccggt ccccggcagc tgccggggca
     1021 gctggcgatc cgggcccagg ccgacagcat gaacctggcg gtggtcgaag cctttacccg
     1081 gaacctgcgc caggtgcggg gattcctaac ggccgatgtg gcggtccagg gtacctggga
     1141 ccagccccgc ctgggcggaa ccgtggaggt ggtggaaggc accgcggtgg tccccaatct
     1201 cggcgttcgt tacgggccgg tgaatgggca catcaccatg agcggggact ccctcgtgat
     1261 cgataccctc gaaatcgggg gccgtgaggg ccggctggtg gcgaccggct acacccggct
     1321 cgagaacctg acccggccgg tgctgggact ggatttccga gcctacgact tcgtggtgat
     1381 ggatgtgccc gactttctga ggatccaggc cgacggcaac ctccgcctgc gggggccgct
     1441 cttccacgcc accatgaccg gtcaagccac catgcggaac tcggtggtct acttcgccga
     1501 tctggtgacc aagtcgattg tcaacctgga agacccgctg ttcgccgatc tggtcgacac
     1561 ggcgtccatc cggcagcgga gattgggggc ggcgttccag agccggttcc tcgactcgct
     1621 gacgatcagc gatttcgagt tccaggcggc cgaaggagtc tggctccgct ccaacgaagc
     1681 aaacatccag ctcgagggac gggtcatcgt cggaaagcgg cgcgggctct acaacctgac
     1741 cggagagttc aacgcggtcc ggggcaccta caatctcaaa ttgctcgcca tcacccgggc
     1801 ctttgacgta actcgcggaa gggtgaggta tgtcggcgac gccgacctca acgccgacct
     1861 cgatatcgaa gcccgtcacc tgctccggcc ggccgaagcc caaggggcca gccgtgacat
     1921 cgaggtgacg gcgcgcatcg ggggaaggct gcgcgccccc accctggcgc tcgagagcaa
     1981 catccggccc cccctgtccc agagcgatct gatctctctc ctgatcctgc gaagcacccg
     2041 gagccagctg gcctcgcccg ggcagtcaca gcaggccgcc caggtggcga gtctcctcct
     2101 ctccaccttg accagcgaga tcgaaagccg gctgctggat gagggcgggc ccgacctcct
     2161 cgagatccgg ccgggagtca gttttggggt ggcgggccag tcgaccctgt cgcgcctgtc
     2221 ggccggatgg cagctgggta accgctggtt cgtgagcctg accacggggt tttgccagga
     2281 ttttcagcaa ttcgactatc gcaactttgg ggcgagtctg gactatcgcc ttggtcgcca
     2341 tgccagcctc tcggtaagcg ccgagcccta ccagacctgc ctggccgggg ccaccggcgt
     2401 tgccaccaag cgttaccaat tcggctcgga tctccgctgg gaacgggagt tttgatggcc
     2461 cgggccgtgc tgattaccaa cccggccgcc gcccgtacca cccacgccag cgtcagagcg
     2521 gtcagcgacg tcctccaccg ggccggatgg actctcgagg tgctggccac cagcggcccg
     2581 ggggacgcca gccggatcgc cgcctatgcg gtggaggccg gggcggaggt ggtggcggtg
     2641 caggggggag acgggaccac gatgcaggca gcctcggctc tggtcggaac caacgtggcg
     2701 ctgggcctgg tccctggcgg caccggaaac ctgctggccg gcaacctgcg tattccccgc
     2761 tccgtgaccc gggccgcccg cgccctggtg gatggccggc ggaggcggat cgatctggga
     2821 cgcgtggacc aggcccatgg aggcgcctac ttctcggtgg cctgcggggc cggcatcgac
     2881 gcgcgggtca tgggcgagac cgcttcggaa ctcaagcgcc gctggggcat cggagcctac
     2941 atggccacca ccctcagagt cctgccccag atgggcagct tccaggccct ggtgaccgtc
     3001 gatggagtcg agtacgaggc tgaagccgcg atgatcctgg tagccaactg cggcgaagtg
     3061 atccccccct ttgtgcggct gggccacggg atcacgcccg aggacgggct gctggatgtg
     3121 gtcgtggtcc gaggcaagaa cgtgtgggac tcaatgcggg ccctgtggca cgtactcagg
     3181 gatctcccgg gcgcgagcgg cgaaggtacc ttcatcgggt atgcccgggg gaaagtcatc
     3241 cggatcgaga ccgatgtacc gcagccggtc gaattggacg gcgatgccga cgggcacacg
     3301 cccttcatgg cggaagtggt cccgggtgcg atcgcggtgg tggtaccgaa gtaatcgacc
     3361 aaggcaagcc catcaaggat cggtgatgag cgacgcaatc ctgctgattg acgacgatgc
     3421 ggttgccctc cgggggctgg gcggtcatct cgagcagcgg ggcttcgagg tcgcccggga
     3481 gctggatggc gcgggagcgc tcacggcgtg cgatcgcctc gagcccgacg tggccatcct
     3541 ggacctgggt ctgaccccgg cgaacggaga ggatctgctg gtcttgctca agcagcgggg
     3601 cgtcgcggtg atcgggctgc tggaagcgga cgatgagtcc gccgtggtcg aggcgtatcg
     3661 ccgcggcgcc gatcaggtcc tggtccgtcc gggcgatgcc gcggtgctgg ccgccgccgc
     3721 ccagcgtatc gccgagatca gccggctgcg gcgcgcggcc gaagtggtga tgagccctcc
     3781 cgaaggccta acgctggaaa gcctggggac ctcatcgacc atgcgcgcgg tgggccagca
     3841 gatcgctgcg ctggcgcaga gcgaccggac cacggtgctc atcatcggcg agcatggtgt
     3901 gggaaaggcg tgggccgccc ggttgatcca cgatctgggc gcccggatcc gggaaccgtt
     3961 cctccaggcc tggtgcaccg gcaccagcgg cgtcgccctg gagacccggc tcttcggtta
     4021 cgagcgcggc gccgtgctcg acggcaagcg ccgggtgcgg ggcctgctgg agctggccgg
     4081 ccgcggcacg ctgctgctgc gggaaatcgg cgccatgccg ctggaactgc agccggtgct
     4141 gctccgggtc ctcgagtcgc ggaccttccg gcgggtggga ggccagcgcg atgtgccggc
     4201 ccacgcccgg atcatcgtca cctccaccca cgatctctca caggaagtcg agctcaacca
     4261 tttccggggc gatctctact atcggctcaa taccatggtg ctcaccatcc caccattgcg
     4321 ggagcgctcc gatgccgacc gcctgatgct ggtgcagggc atccacgcct cgttggcaag
     4381 ccgcctgccg gaaccgccgc cgccgctcgc tcccgaatcg atggaacgcc tgatgaccca
     4441 caactggccc ggcaacattc aggagctggt cgcagtgctg gagcgcagcg cgctcatggc
     4501 ccggggacag ccggcggttc tggtggagca cctgcccggc gagttccggg cccggcccgg
     4561 actgggtgac cggcgccaca cgccgatgag cctggaagag ctggagcgac tccacatcga
     4621 ccggaccctg cggttccatg gtggcaaccg cacccgggcc gccaaggagc tccggatctc
     4681 ccgcgccacg ctcatcaaca agatcaagcg gtacgccatc acggagtgat catgtcgccc
     4741 aaggagctga aggaaaagga cgccatgatg tgccgcagct gcggccgcga agaaagggcg
     4801 tcggaaggct atccctgcga cggctgcggc accttcatct gcctcatctg cagtttccgc
     4861 ggcgtcactc tctgtgccgc ctgttcggcc agccagacgt ctccaccagc cccgccacaa
     4921 ccacccacgg cggcatgaac gccgtgttgg ccacggcggc gatcgcaccg gtgctgcgcg
     4981 agcccacggt gcgatccgag caggtcaccc agctggtact gggggaaccc gccatgatcc
     5041 atggccaatc cggtgactgg ctcgaggtcg agaccgtgat cgaccggtat cccggctgga
     5101 ttcaccgcgg ctatctgcgg gagcttccgc gggacgatgc cgatgcctgg ctggccgggg
     5161 cggcctggtc cgacggcgcc gaggccaccg tctccggcgc cagggtgcag ttgccgctcc
     5221 gggcccgggt ccagcggacc gaagacgcta tccagctccc cgatggccgc gagggcatgg
     5281 tggctcgcgg gacggtggcc gatctcgagt tcctgcggtc gagcgcacgg cagatgcggc
     5341 cggatcagtg ggtcatccgc aaattcaccg gctcgcccta tctctggggc ggggtaactc
     5401 cctggggcgt cgattgcagc gcgttggtgc aaaccgcctg gctggcccgc gggaccacgc
     5461 tcccacggga tgcgtcgctc caggctcgag aaggcatcga ggtgaaccgc gaccgcattc
     5521 agccgggcga cctgctcttc ttcgccgacg gcgacacccc gaaccgcatc acccacgtca
     5581 gcatcgccgg cgagcgcgat acggtggtcc acgcgacgtt gcgccgcggc ggcgtggtgg
     5641 tggagcgcct ggccgatctg ggatggctga tggagaagct ggtagcggtc agacggattc
     5701 tcgactgaca gtttccctct cccctcttcc ggctccccta tctttcatgg atgattcgaa
     5761 aactggttct gtttgatatc gatgggacgt tgttgctgag cctcggtgct ggccgccggg
     5821 cgctggtcgc cgccatgggg gccgagctgg aacaggctga agcggtcgcg gccgcggttc
     5881 ggttcgacgg aaaaaccgat ccccagatcg tgcgcgagat gtttggtgcc gccggcgagc
     5941 ccgcggtgga tgacgcccgc atcgattccg tcctcgaacg ctacatcgag tgtctgcggg
     6001 agcagctggc ccagcccggg catcgcaccg aggtcatgcc gggcgtgccg gacctgctcg
     6061 atcgggtgga atccgaagcc gtcgcgctgc tgggactgct caccggcaac gtggcgactg
     6121 gcgccgagct caagctccgg tctggtgcca tcgatccccg gcgtttccgg gtgggggcgt
     6181 ttggctccga tcacgcggtc cggtccgagc tgcccgcgat cgcggcgggg cgggccgaat
     6241 cgctgttcgg ccgccgcccc cagggcgaag agatcgtcat catcggggac acaccctccg
     6301 atatgatctg cggcctcgca gtgggtgccc gatcgatcgg tgtcgccacc ggtgcctatt
     6361 ccgccgccga gctgtcgcgg gcaggcgcct acgccgcctt cgacgatctc agcgaccaga
     6421 atgccgtgtg gcaggcgatc agcgcgtgaa cgctgtgatc gggtcggtgc cggagctggg
     6481 gccgctgctg ggccggttct ccagccccgc tgctcgcggc ccggaagcgc ttccgctcga
     6541 tgacctgcgc cgcaatctgc tgggcctgct ctaccagcag ggcagtgccg ctcggcggga
     6601 gctgacggcg gggcggcccg agggggcccg ggttcaactc gcgctctccg cctggctggc
     6661 gctatggacc gacgccgtga aagcgacggc ggatcgcctg ctgggtgaaa tcgatcgtcg
     6721 gatcgagctc gctggagccc agtcgcgttt cccggagcgc cggctggcgc tggccaaacc
     6781 gtcggaagag gatcgccggg tggtgcgggc ccggttggcg gcggccggca ttccgctcga
     6841 gcgggtgtct ccgccggaac aggcgagtga ctggcccgat ggtctgctcc gcgtcgccat
     6901 ggcgctggat gcatcctggg aacggctcga gcgagttgtg accgatgagc tgctggtatg
     6961 gcagcgcgac gtcgaccggg ttcgcgcctg gcgccgcccc accggccccc tgtgggccat
     7021 cacggtcgcc gtactgctgc tcgccctgtt gctgggactc tcggtgggcg gctacttgcc
     7081 cgctcccggg cccctcagac tgctgcaaca atggttctgg agtttgtcgt ggccgtgatc
     7141 ggcatcggaa tcgacgtggt cgacctggtg cgggctcaac gtctgctgct ccgccacggc
     7201 tcccgggtgc tggagcggtt cctgctcccg ggcgagcgcg aatacgtgac ggccaaggac
     7261 gatccggccc gacacttcgc cgtacgggtt gcggcgaagg aagccgtcta caaggccttc
     7321 cagaccatcc ccggggcgga agccatcagc tggcaggaca tcgaggtgga acggaccgtc
     7381 gggggccgac cccacgtccg gctccatggt cgagccgcgg agttggccgg gaacctgggg
     7441 cggtggcggc tgcatctctc actgacccac accgaccaga ccgccgctgc cagcgcagtc
     7501 ctggaggccg actcttccat cgccgactga ctgactctag tttgaggtcc ggtcagccaa
     7561 aacgatttga ga
//
LOCUS       DASWKS010000122         5072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1536790, whole genome shotgun sequence.
ACCESSION   DASWKS010000122 DASWKS010000000
VERSION     DASWKS010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536790"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1233
                     /locus_tag="VGA78_03785"
     CDS             <1..1233
                     /locus_tag="VGA78_03785"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEX9893016.1"
                     /translation="GSIDSQGTWIGTWALEVNGDPTLERPLRSGPTLKDLSAQLADRG
                     IRRLVGPLTIQSAWGAAAAAYPAVWSPKHKGRWFAPLIGEVTLNENLVSFTVAPGTRV
                     GAHARVVGTAPEGMADLAELKARTVSGRRSRLAFRQMPNGRFTITGSIGIRARPRIWR
                     GPSTNPQAVLEASWGAALTQAGIEWVRAPGIGGEGTAAGRMTLAEVISAPFDSIASEV
                     NTRSLNIGAEAMLRWAAGPVPGAAQRLTDHVREVIGDPMGVTLVDGSGLSYDDRASPW
                     AFVTYLARFPSTPAGRNFPLLLPANGSGTLRKLTNGLPGPGVVRAKTGTLGNAATLVG
                     YLGHKDGLILISVMYNGTRVNAAKQQQWRLFRLLGADGTMVPGDSMGAEIMGGEDVII
                     PPAPPDPSAPPPAPGTAP"
     gene            1264..2571
                     /locus_tag="VGA78_03790"
     CDS             1264..2571
                     /locus_tag="VGA78_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEX9893017.1"
                     /translation="MFRRDFVARVLGATMVPSFSPPSSTRQAGSVRVDGARLNRHLAE
                     LATFGRSATGTNRVAYTEADLAGRSYVMDLMRSARLEVRVDPAGNIFGRRDGREAGRP
                     VILFGSHIDSVPDGGNYDGDVGALGAIEVAHTLADRRIVTRHPIEVVVFQNEEGGTVG
                     SKLMATGVTEAELERVARSGKTIREGIGIIGGDLNRLAEARRKPGDLLCYFELHIEQG
                     GTLDEAGIQIGVVEGIVGIRWFEVTIEGFANHAGTTPMDRRRDAMLAAARLTVAVNQV
                     VRTNPGRQVGTVGRISAVPGTVNVIPGRVILTIDLRDLSTEKLTMLTSRFQEEAGKIA
                     AETGTTIKFREMSTNDPAPADPRLRGIVARSADALGLTHRDLPSAAGHDAQEVARIAP
                     VGMIFVPSVRGISHSPEELSRPEDITNGANVLLGAVLAADRGL"
     gene            3080..>5072
                     /locus_tag="VGA78_03795"
     CDS             3080..>5072
                     /locus_tag="VGA78_03795"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HEX9893018.1"
                     /translation="MITSQARTRSGLFKTHQIGGRLYFEIPRSALNRELLLVTRASRV
                     PVNMGYGGQQVAATRVLKWERRDHRVLVRNVSYQTVADSSHPIYTAVRNSNNDMILGG
                     FNVEAYGPDSAPVIDVSRLYTAPPPELGPGPRVRTQPDAARSYIEQVLSFPENVEVEA
                     TVTYPPPPVGGPAVPVNPFAPAATGTASIVMHWSMIKLPEKPMMPRLADKRIGIFALQ
                     QVDYGRPEQRAETRHYLVRWRLEKKDPNAAISEPVKPITYYVDPATPDWLKPYVKRGI
                     EQWQVAFEAAGFRRAIVAADPPSKAQDPDWAPEDARYSVVRWLPSTIENAQGPNVHDP
                     RTGEILESDIYMYHNIMNLQRTWYFTQVGHLDPRARMWPYPDSLMGRLVEFVVAHEVG
                     HTLGYQHDQKGSSTYPVDSLRSRTWAKRMGHAPSIMDYSRFNYVAQPEDKIDIEDLIP
                     RIGPWDQYVTRWGYTPIPGARTPDEEWKTLDRWSREQDSVPWYRFNMFDSRGADPGDH
                     TEAVGDADPVKATGWGIKSIKQIVPLLVPATVHEGYDYDDLDLMYSRLMGQWATELRH
                     VAMMVGGADAQEKYAGQNGLRYRPWPRARQKEAVQFLNQNAFATPEFLLDQAILRNIE
                     VEGALRRVNQAQAGVLNTLLNDRRLERVVEFEATAPNKRE"
BASE COUNT          890 a         1711 c         1719 g          752 t
ORIGIN      
        1 ggatcgatcg actcgcaggg aacctggatc ggcacctggg ccttggaagt gaacggcgac
       61 cccaccctcg agcgcccgct ccggagcggt cccaccctca aggacctgtc ggcccaactg
      121 gccgaccggg gcatccgccg cctggtcgga ccgctaacca tccagagcgc ctggggtgcc
      181 gccgccgccg cgtatcccgc cgtctggtcg cccaagcata agggtcgctg gttcgcacca
      241 ctgatcggcg aggtcactct caacgagaac ctggtgtcct tcaccgtcgc tcctggcacc
      301 cgggtcggag cgcacgctcg ggtggtaggc acagcgcccg agggcatggc cgatctggcc
      361 gaattgaagg ccaggaccgt gtcggggcgc cggagccggc tggccttccg gcaaatgccc
      421 aacggacgtt tcaccatcac cggctccatc ggcatccggg cccgcccccg catctggcgc
      481 ggaccgagca ccaatccgca ggcggtgctc gaggccagct ggggtgcagc cctgacccag
      541 gccgggatcg agtgggttcg tgcacccggg atcggaggag aaggaaccgc ggccggccgg
      601 atgacactgg ccgaggtgat ctccgctccc ttcgattcga tcgccagtga ggtgaacacc
      661 agaagcctga acatcggggc cgaagccatg ttgcgctggg ccgccgggcc ggtgcccggg
      721 gctgcgcaac gattgaccga ccacgtgcgg gaggtgatcg gcgacccgat gggggtgaca
      781 ctggtggacg gcagcgggct ttcctacgac gaccgggctt caccctgggc gttcgtgacg
      841 tacctggccc ggttcccatc cactcccgcg gggcgaaact tccccttgtt gctgcctgcc
      901 aacggctccg gaaccctccg caagctgacc aacggactgc cgggtcccgg tgtggtgcgg
      961 gccaagaccg gcactctggg gaacgccgcc acgctggtgg gctacctggg gcacaaggac
     1021 ggtctgatcc tgatctcggt gatgtacaac ggcacccggg tcaacgccgc gaaacaacag
     1081 cagtggcggc tcttccgcct gctgggcgcg gacggtacca tggtgcccgg tgactcgatg
     1141 ggcgccgaga tcatgggcgg cgaggacgtg atcatccctc cggctccgcc cgacccttcg
     1201 gcaccacccc cggctcccgg caccgcacca taacgcctcc gggagcccga tcccggaggt
     1261 cccatgttcc gccgtgattt cgtcgcccgg gtactggggg cgacgatggt ccccagcttc
     1321 tcaccgcctt cgagcacccg ccaggcgggc tccgtccgag tcgatggagc ccgcctgaat
     1381 cgtcatctgg ccgaactggc gaccttcggg cgcagtgcca cgggcaccaa ccgggtcgcc
     1441 tacaccgaag cggacctggc cggccgcagc tacgtgatgg acctgatgcg aagcgccagg
     1501 ttggaggtgc gggtggatcc ggccggcaac atcttcggcc ggcgggatgg ccgggaagca
     1561 ggtcgtccgg tcatcctgtt cggctcccac atcgattcgg taccggacgg cggtaactac
     1621 gacggcgacg tcggcgccct gggcgcgatc gaggtggcgc acactctggc cgaccggcgg
     1681 atcgtgaccc ggcatccgat cgaagtggtg gtattccaga acgaggaagg cgggaccgtc
     1741 ggaagcaagc tgatggccac cggtgtgacc gaagccgagc tggaacgggt ggcacggtcg
     1801 ggcaagacca tccgggaggg catcgggatc atcggcggcg atctgaaccg gctggcggag
     1861 gcacggcgca agccggggga cctcctctgt tacttcgagc tgcatatcga gcagggcggc
     1921 acgctcgacg aggcggggat ccagatcggt gtggtggaag gcattgtcgg catccgctgg
     1981 ttcgaggtga ccatcgaggg gttcgccaat cacgccggca cgacgcccat ggaccggcgg
     2041 cgggacgcga tgctggcggc ggcccggctg acggtggccg tgaatcaggt ggtgcgcacc
     2101 aaccccggac ggcaggtcgg caccgtcggc cgcatctcgg ccgtaccggg gacagtgaac
     2161 gtcattccgg gccgagtgat actcaccatc gatctacggg acctctcgac cgagaagctc
     2221 acgatgctga ccagccgttt ccaggaggaa gccgggaaga tcgcggccga aaccggaacc
     2281 accatcaaat tccgcgagat gtcgaccaac gacccggcgc cggccgaccc ccgactgcga
     2341 gggatcgtcg cgcggagcgc cgacgcgctg ggattgactc accgtgacct gcccagtgcc
     2401 gctgggcatg atgcccagga ggtcgcgcga atcgcgccgg tggggatgat cttcgtgccg
     2461 agcgtgcggg ggatcagtca ttccccggag gagctgagcc ggccggagga cataactaac
     2521 ggagcgaatg tgctcctggg ggcggtgctg gcggccgaca ggggactcta acgcaagtag
     2581 tgaatcacga gaaaccgaga gcggggctgc cgggtcctgg tcggcacgta ctggaggtcc
     2641 agccggtcgc tgcagtgcgg ctggcgccat gctacggatc gcgccgcgac ccgaggccgc
     2701 acctgacgcg cctcggccgg gtcctccagc acgcgcctcc cacccggcgg ccccgctctc
     2761 ggtttctcgt gattcgattg gcgttcaacg accttgagcc ctgtcccgta ccagagttac
     2821 ttccgcggtc aggttcatcc aactcgagga aatcatgatg ccggctcgac gactggtagc
     2881 agcggccaca ctcatcgcac tggtcggttg cagcaaggcg accccaagta gcggccccga
     2941 acctcaggcc ccaccggctg gaaggccggg agcccctgcc gggcaaccca ccggcccggc
     3001 cggcgctcca caggacacca ctcagcgggc cggcggcccc ggtcaggctg gcgagccgtc
     3061 gccccgaccc tacaatcgcg tgattacctc gcaggccagg acccgttccg gcttgttcaa
     3121 gacccaccag atcggcggga gactctattt cgagatcccg cggagcgcgc tcaatcgcga
     3181 gctgctgctg gtgacccgag ccagccgggt tccggtgaac atggggtatg gcggccagca
     3241 ggtcgccgcg acgcgggtgc tcaaatggga gcgcagggac caccgggtgc tggtgcggaa
     3301 cgtgtcctat cagacggtcg cggacagctc ccatccgatc tacaccgcgg tgcgcaattc
     3361 caacaacgac atgatcctgg gcgggttcaa cgtggaggcg tacggcccgg acagcgcgcc
     3421 ggtcatcgac gtcagccggc tctataccgc cccgccgccc gaactcggtc ccgggccccg
     3481 ggtgcgcacc caaccggacg cggcccggtc ctacatcgag caggtcctgt cgttccccga
     3541 gaacgtcgag gtcgaggcga ccgtcaccta cccgcctcct ccggtcggag ggcccgccgt
     3601 cccggtgaat ccgttcgcgc cggccgctac cggcacggcc agcatcgtga tgcactggag
     3661 catgatcaag ctgcccgaga agccgatgat gccgcggctg gccgacaagc gcatcggcat
     3721 cttcgccctg cagcaggtgg actacggccg gccggaacag cgggccgaga cccgccacta
     3781 cctggtgcgc tggcggctgg agaagaagga ccccaacgcg gcgatatcgg agccggtgaa
     3841 gcccatcaca tattatgtcg atccggcgac gcccgactgg ctcaagccct acgtcaagcg
     3901 cggtatcgag cagtggcagg tagcgttcga agccgcggga ttccggcgcg ccatcgtggc
     3961 ggccgatcct ccctccaagg cccaggatcc cgattgggct ccggaggacg cgcgctactc
     4021 ggtggtccgc tggctcccgt ccaccatcga gaacgcgcag gggcctaacg tccacgaccc
     4081 ccggaccggt gaaatcctcg agtccgacat ctacatgtat cacaacatca tgaacctgca
     4141 gcggacctgg tacttcaccc aggtcgggca cctcgacccg cgggcccgga tgtggcccta
     4201 tcccgactca ttgatgggcc ggttggtgga gttcgtggtg gcacacgagg tcgggcacac
     4261 cctgggctac cagcacgacc agaagggcag ctcgacctac ccggtggatt cgctgcggag
     4321 ccgtacctgg gccaaacgca tggggcatgc cccgtcgatc atggactatt cccgtttcaa
     4381 ctacgtggcg cagccggaag acaagatcga catcgaggac ctgattccgc ggatcggccc
     4441 ctgggaccag tacgtcaccc gctggggcta caccccgatt cccggcgccc gcacccctga
     4501 cgaggaatgg aagacgctgg accgctggtc gcgggagcag gattcggtgc cgtggtaccg
     4561 cttcaacatg ttcgactcgc gcggcgccga tccgggcgat cacaccgaag cggtcggcga
     4621 cgccgacccg gtcaaggcca ccggctgggg gatcaagtcg atcaagcaga tcgtaccact
     4681 cctggtcccc gccacggtgc atgaaggcta cgactacgat gacctggacc tgatgtacag
     4741 ccgactgatg gggcagtggg ccaccgagct ccgacatgtg gcgatgatgg tgggaggcgc
     4801 ggacgcacag gagaaatacg ccggccagaa cgggctgcgg taccggccct ggccccgggc
     4861 ccggcagaag gaggcggtgc agttcctgaa ccagaacgcg ttcgcgacgc cggagttctt
     4921 gctggaccag gccattcttc gcaatatcga ggtcgaaggg gcgctgcggc gggtcaacca
     4981 ggcccaggcg ggcgtgctca acacactgtt gaacgaccgg cggctggaac gggtggtgga
     5041 gttcgaagcc accgcgccga ataagcgcga ag
//
LOCUS       DASWKS010000123         9518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3019700, whole genome shotgun sequence.
ACCESSION   DASWKS010000123 DASWKS010000000
VERSION     DASWKS010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3019700"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VGA78_03800"
     CDS             <1..363
                     /locus_tag="VGA78_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893019.1"
                     /translation="QQPPRSWSTPPTLAGEWKGTVRTWDGTVPFTLTFQPDGDVVAQL
                     ANQPKALLWGTNWQGDSVFFGRFDSRMPTPDAALHRHTIFLNLTLRGTKLSGQASAQT
                     VPPDTVFFARTSYVDLGR"
     gene            complement(509..2008)
                     /locus_tag="VGA78_03805"
     CDS             complement(509..2008)
                     /locus_tag="VGA78_03805"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9893020.1"
                     /translation="MPTKFLLLLLSLVLAPAASFAQRQTDPLAGLDGYITLAMKDWNV
                     PGLGVAIVKGDSVVYLKGFGVRELGKPDPVTPNTLFAIGSNTKSFTSAATGMLVDDGK
                     MKWDDKVTKHLPSFQLFDPYVTREITIRDVLSHRSGLGRRGDMLWIAARYPRAEIIRR
                     VRFLEPNAGFRTEMGYQNIMFLTAGQAAGAAAGMTWDDLIAQRIFQPLGMATSTTTTR
                     DLPQRSEVATPHGMRDSALKPIAHRNLDNIAPAGSIYSSASEMTRYLRFILGGGSFEG
                     KQLLKPQTLAVIQTPHVSMATQRDSLRPSTHFNGYGLGWVLQDYKGRKIAWHNGGIDG
                     FLSEMWTVPEEKLGIVVLSNRDGHQLGPAVVWRILDLYMGPVEHDWHAITFKRWQGLL
                     TAQSASAKQAEAARTKDTKPSRPLEAYAGTYTDSLYGDFKLKLENGQLTADYGAGTFG
                     GTLEHWQFDSFRATWRDQQFGRGFISFGLDRDGKVTEARVDNLATFKRR"
     gene            complement(2141..3679)
                     /locus_tag="VGA78_03810"
     CDS             complement(2141..3679)
                     /locus_tag="VGA78_03810"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9893021.1"
                     /translation="MDGTLMSKQYMVLVAASLALCSTVQAQKKADPLAGLDGYITQAM
                     KDWNVPGLSIAVVKGDSVVYLKGFGVKEIGKPDPITPNTLFAIGSNTKSFTAAAIGML
                     VDDGKMRWDDKVTRHLPGFQLYDPYVTRELTIRDVLSHRAGLGRRGDFLWIAAGYPRG
                     EVLRRIRFLEPNAGFRTELGYQNAMFIAAGEAAASAAGTTWDELVTGRVLRPLGMTRS
                     NTSVKDLARDADVAHPHSVRDSILKPVPWRNIDNVAPAGSINSSVAEMTRYLRFIAGG
                     GTFEGKLLLKPTTLGVITTPHTIVPFPPDTLFPTTHFRAYGLGWGLSDYRGRKVLAHS
                     GGIDGMLSWMQVVPEERLGIMILTNSDNHGMGSAILYRLLDGYLGDGSRDWNAILLAQ
                     FRRGQAAQQARDAARVAARVRNTVPSRPLAAYKGVYADSMYGDLRIRVDGDRLIADLG
                     PHGAGGSLEHWQYDSFELVWRDAALGRSPLTFTLDRDGRPALVRIESQQDPLVFRRRP
                     QENP"
     gene            complement(3766..4932)
                     /locus_tag="VGA78_03815"
     CDS             complement(3766..4932)
                     /locus_tag="VGA78_03815"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HEX9893022.1"
                     /translation="MTTRREFVRTGAGITAAALPFFNRGRFRLWAGSLEYSARTLDLM
                     KRATVVDMLSPLTLNFPLQGKWFADPELFTAADAKRYLDSGIHVFHIAVGNGGPDAYN
                     QSLRFFAQWNGLIAGNDHLMMRIDSPADFERVKTSGKVGILLGLQNSDHFQRPEQVDF
                     FFNLGQRVSQLTYNSRNWIGNGSTERRDDGLSDYGVEIVQRMNRVGMVVDVSHSGDRT
                     TLDAFEASSVPVLITHSNCRALAPGHPRCKTDEAIRAMAAKGGVMGITGVRMFVKVDE
                     PTTIEHALDHFDHVRKLVGPQHLGVGSDIDLDGYDDMPPEINKQLRAGYKGSYGFREK
                     IDIEGIDHPKRMFDLTEGLIRRKYTDEEILGVLGANFRRVLSQIWTSRKPAGDK"
     gene            complement(4940..6469)
                     /locus_tag="VGA78_03820"
     CDS             complement(4940..6469)
                     /locus_tag="VGA78_03820"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9893023.1"
                     /translation="MPARRALAAAVLFLGASPVLAQQGPLRGLDPYVTQALRDWDAPG
                     IAIAVVRNDSVVLARGYGVRELGRPDPVTENSLFAIGSTSKAFTAALLGMLVDEGKIR
                     WDDPVTRHLPGFQLYDPYVTREITVRDLLTHRSGLTRGDRLWASSGFTREEVLRRVRY
                     LKPTWSLRSNYGYQNIMYLAAGQLAAAVSGHTWDQAVQERIFTPLGMRRTVTSTLPLK
                     QLSDVATPHERLQGVVTPVEWMNIDNIGPAGSINSSVAEMAQWVRLQLGRGSYGGRKL
                     IDSATVKEMHTIQMHIRPSDTDEKLWPESHLMGYGLAWSLRDYRGLKLVAHGGAIRGM
                     RAYVALVPERKLGVVVLTNVSESSLPTALAMRVIDQHLGAPVKDWSAAYLKEAKAGRE
                     RSAEARRRIEADRVAGTSPSLPLDRFVSTYADSMYGEIRIGKEGDRLTIAFGPEFVGE
                     LQHWHYNTFETVYRNKALGRGFVSFRLDHQGLVAALDIQDLATFGRVPGSALAAGSGS
                     R"
     gene            6643..8100
                     /locus_tag="VGA78_03825"
     CDS             6643..8100
                     /locus_tag="VGA78_03825"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX9893024.1"
                     /translation="MLTTAPALKYGTVAHWVAGRRAPGQGERVPVHNPATGTGIAETP
                     LATRPEVDTAVAAARKAWPAWAATPIKDRVQVLYRYRELLQRRRAELAALITEEHGKL
                     LPESDAEIARAIELTEFACALPQFATGEVLKVSRGIECRLERFPLGVVASIGPFNFPV
                     MVPHWTIPNAIALGNCLVLKPSERVPLSALQSAELLAEAGLPPGVFTVINGARAAVEA
                     LCDHPAIEAVTFVGSTPTAQAVYRRATHSLKRALALGGAKNHLVVLPDADPDTTPAAV
                     LGSAIGCAGQRCMAASVMVAVPRTEGILEQVCALARAAVPGRDYGPVISAAARERIEQ
                     AIGAAVSDGARLLVDGRGISPAGGEAGFWVGPTILDDVRPDMAIAREEIFGPVLAVIR
                     APSLDAALDLQAQSPYGNAASIFTRDGGAARELMERASAGMIGINIGVPVPREPFPFG
                     GWNASKYGVGDITGRAAIEFFTRAKKTTVQWGDRF"
     gene            8188..>9518
                     /locus_tag="VGA78_03830"
     CDS             8188..>9518
                     /locus_tag="VGA78_03830"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX9893025.1"
                     /translation="MTTTSAPLTLPPTSHVPRPYTGPSRAEVLALRQQFTNPAIFTLY
                     QSPLMIVEGRGQYVWDETGRRYLDFFAGIVTLSCGHSHPKVVARVREQLETLQHTTTI
                     YLHPNFPRLAQELAARMPEGLDVTYFVNSGSEANDLAVTLSRIYTGNIDVMALRNAYH
                     GGTQGAMGLTSHHTWKYNVEYGGRVHHAINPEPYRSPFSGTPEEIASKSVADLRDVIR
                     YSTPGRVAAFIAEPIGGVGGVTYGAPNYLREAYAVTREHGGLCIADEVQTGFGRTGEH
                     FWGFQNWGVVPDIVTMAKSIGNGLPLAAVTTRREIAEAMTQRLHLNTFGGNPVSCAAG
                     LAVLEVIDEEQLQENARGQGARLKRGLEELMSRHHLVGDVRGMGLMLGVELVEDRATR
                     IPARAATTAVLETAKDLGLLLGRGGLDGNVLRIKPPLCITADDVDYALEVL"
BASE COUNT         1569 a         3090 c         3187 g         1672 t
ORIGIN      
        1 cagcagccgc cgcggagctg gagcacgccc ccgacgctgg ccggggagtg gaagggcacg
       61 gtgcggacct gggacggcac ggtgccgttc accctgactt tccagccgga cggggacgtg
      121 gtcgcccagc tggcgaacca gcccaaggcg ctcctgtggg gaacaaactg gcagggggat
      181 tcggtgttct tcgggcggtt cgacagtcgc atgcccacac ccgatgccgc gctgcaccgc
      241 cacaccatct tcctcaacct gaccctgcga ggcaccaaac tgagcgggca agcatcggcg
      301 cagaccgtcc cgccggatac ggtgttcttc gcgcggacat cttacgtgga tctggggcgc
      361 taatcgaggg gcgggttgag gcggttatgg cggttatggc ggttaaggcg gtcaagggcg
      421 gtcacgggcc ggctagaagg tcgtggtcta accgatctcc ggaaccactc taaccgcccc
      481 aaccgcctaa cccccttaat cgccctgatc agcgtcgttt gaacgtcgcc aggttgtcca
      541 ccctcgcttc ggttaccttg ccatcccggt ccagcccgaa gctgatgaag ccgcggccga
      601 actgctgatc ccgccaggtg gcgcggaagc tgtcgaactg ccagtgctcc agcgtcccgc
      661 cgaaggtgcc ggcgccgtag tccgcggtta gctggccgtt ctcgagcttg agcttgaaat
      721 cgccgtacaa cgaatcagtg taggtgccgg cataggcttc cagcggccgg ctcggtttcg
      781 tgtccttggt ccgcgcggcc tcggcctgtt tcgccgacgc cgactgagcc gttaacaggc
      841 cttgccaccg cttgaacgtg atcgcatgcc agtcgtgttc caccggtccc atgtacagat
      901 ccagaatccg ccacaccacg gccgggccca gctgatgccc gtcacgattc gacagcacca
      961 cgatgccgag cttttcctcc ggcacggtcc acatctccga caggaatcca tcgatgccgc
     1021 cgttgtgcca ggcgatcttg cggcccttgt agtcctgcag cacccacccc agtccgtacc
     1081 cgttgaagtg agtactgggt cgcagcgagt cgcgctgggt cgccatactg acgtgaggtg
     1141 tctggatcac cgcgagcgtc tgcggcttga gcagttgctt tccttcgaag cttccgcctc
     1201 ccaggatgaa ccggaggtag cgggtcatct ccgaggcgct ggagtagatc gagccggccg
     1261 gggcgatgtt gtccaggttg cggtgcgcga tgggtttgag ggcgctgtcg cgcattccgt
     1321 ggggggtagc gacctcgctc cgctggggca ggtcgcgggt ggtggtggtg ctggtagcca
     1381 tgcccagagg ctggaagatg cgttgcgcga tgagatcgtc ccaggtcatg cccgcggcgg
     1441 ccccggctgc ttggcccgcc gtgaggaaca tgatgttctg gtatcccatt tcggtccgga
     1501 agccggcgtt gggttcgaga aaacgaaccc ggcggatgat ctctgcccgg ggataccggg
     1561 ccgcgatcca gagcatgtcg ccccggcggc ccagcccgct ccggtgggac agcacgtcgc
     1621 gaatggtgat ctcgcgggtg acgtagggat cgaacagctg gaacgacggc aggtgcttcg
     1681 tgaccttgtc gtcccatttc atcttcccgt cgtcaaccag catgccggtg gcggccgacg
     1741 tgaacgactt ggtgttggat ccgatcgcaa agagcgtgtt cggtgtcacc gggtcgggct
     1801 tgcccagctc gcgcaccccg aagcccttca agtacaccac cgaatcgccc ttcacaatcg
     1861 ccacgccgag gcctggaacg ttccagtcct tcatggccag ggtgatgtag ccgtcgagcc
     1921 ccgcgagtgg atcggtctgg cgctgggcga aggacgcggc cggcgccaga accagagaca
     1981 gcaggagcag gaggaatttg gtgggcatga taccatccgg tcgggttgag cgattgagcg
     2041 actttagcga ttcagcgatc aaaaggccta cgattgggcg aatgacggcc ccgccaagcg
     2101 ccagtcgcta agtcgctaaa ccgttgcatc gctgaatgtc ctatgggttc tcctggggac
     2161 ggcgccggaa gacgagggga tcctgctgac tctcgatccg gaccagagca ggacgtccgt
     2221 cacgatccag ggtgaaggtc agcggggacc gccccagcgc ggcatcgcgc cataccagct
     2281 cgaacgagtc gtactgccag tgctccaggc tgccgccggc gccgtggggc cccagatcgg
     2341 cgatcaggcg atcgccatcc acccggatcc gcagatcgcc gtacatcgag tcggcgtata
     2401 cccctttata ggccgccagc gggcggctgg gaaccgtgtt gcggactcgg gctgccacgc
     2461 gggccgcgtc ccgcgcctgc tgcgccgcct gtccccgccg gaactgggcc agcaggatgg
     2521 cgttccagtc gcgcgatcca tcgcccagat agccgtccag caaccggtac aggatggctg
     2581 agcccatccc gtgattgtcg ctattggtca gaatcatgat cccgagccgt tcctcgggca
     2641 ccacctgcat ccatgagagc atgccgtcga tgccgccgga atgggccagc accttgcgac
     2701 cccgatagtc gctcaggccc catcccagtc cgtaggcgcg gaaatgggtg gtcggaaaca
     2761 aggtgtcggg cgggaacggc acgatggtgt gcggagttgt gatcactccc agcgtcgtcg
     2821 gcttcagcag cagcttccct tcgaaggtcc cgcctccggc aatgaaccgg agatagcggg
     2881 tcatctcggc gacgctggaa ttgatggagc cggccggggc gacgttgtcg atgttgcgcc
     2941 aggggaccgg cttgaggatg ctgtcgcgca cgctgtgcgg gtgcgccaca tcggcatcgc
     3001 gcgccagatc cttgaccgag gtgttgcttc gggtcatgcc cagcggccgc agaacccggc
     3061 cggtgaccag ctcgtcccag gtcgtccccg cggcgctggc ggcggcttcg ccggcggcga
     3121 tgaacatcgc gttctgatag ccgagctcgg tgcgaaatcc cgcattcggc tccaggaacc
     3181 ggatccggcg gagcacctcg cctcggggat agccggccgc gatccacagg aaatcgcccc
     3241 gccggcccag tcctgcgcgg tgggagagga catcgcggat ggtgagctca cgggtgacgt
     3301 acgggtcgta caactggaat ccagggaggt gccgggtgac cttgtcgtcc catcgcatct
     3361 tgccgtcgtc gaccagcatg ccgatggccg cggcggtgaa ggacttggtg ttggacccga
     3421 tggcgaacag cgtgttcggc gtgatcggat cgggcttgcc gatctccttg acaccaaatc
     3481 ctttcaagta caccaccgag tcgcccttga ccacggcgat gctcagaccc gggacattcc
     3541 agtccttcat cgcctgggtg atatagccgt cgagaccggc gagcgggtcc gcctttttct
     3601 gcgcctgcac ggtggagcag agcgccagac tagcggccac cagaaccatg tactgcttgg
     3661 acatgagcgt accatccatt gacgattgcc aattgacgat tgacgattga ctcctgctcc
     3721 ctgctccctg ctccctgctc cctgctccct gctcccgctt ccccgctact tgtccccggc
     3781 cggcttgcgg ctggtccaga tctgtgacaa tacccgtctg aaattcgcac ccaggacacc
     3841 caggatttct tcgtccgtgt atttgcggcg gatcagccct tcggtcaggt cgaacatccg
     3901 cttgggatga tcgatgccct cgatgtcgat cttctcacgg aagccgtagc tccccttata
     3961 gccggcccga agctgcttgt tgatctcggg cggcatgtcg tcgtacccat cgaggtcgat
     4021 gtcgctgccc acgcccaggt gctgggggcc caccagtttg cgcacatgat cgaagtgatc
     4081 cagcgcatgc tcgatggtgg tcggctcgtc caccttgacg aacatccgca ccccggtaat
     4141 gcccatgaca ccgcccttgg ccgccatggc gcgaatggcc tcgtcggtct tgcagcgagg
     4201 gtggccgggg gcgagcgccc ggcaattgga atgggtaatg aggaccggca cgctcgaggc
     4261 ctcgaacgcg tcgagcgtgg tccgatctcc ggaatgggag acatccacca ccatgcccac
     4321 ccggttcatc cgctggacga tctcgacccc gtagtcgctt agaccgtcgt cccggcgctc
     4381 ggtggagccg ttgccgatcc agttgcggga gttgtaggtg agctgggaga cccgctggcc
     4441 gagattgaag aagaagtcga cctgttcggg ccgctggaag tggtcggaat tctgaaggcc
     4501 cagcaggatc ccgaccttgc ccgaggtttt cacccgctcg aagtccgccg gggaatcgat
     4561 gcgcatcatg aggtggtcgt tgccggcgat cagcccgttc cactgggcaa agaacctcag
     4621 cgactgattg taggcatcgg gaccgccgtt cccgaccgcg atatggaaga cgtgaatgcc
     4681 ggagtcgaga tagcgcttcg cgtcggccgc ggtgaacagc tcgggatcgg cgaaccactt
     4741 tccctggagc ggaaagttga gcgtgagcgg gctcagcatg tcgacgaccg tggcccgctt
     4801 catcaggtcg agcgtccggg ccgagtactc gaggctgccg gcccacagcc ggaaccggcc
     4861 ccgattgaag aagggaagcg cggccgccgt gatgccggcc ccggtccgga cgaattcgcg
     4921 tcgggtggtc atgggttcct cagcggctgc cggagccggc cgcgagcgcg ctgccgggga
     4981 ctcggccgaa ggtggcgagg tcctggatgt ccagggcggc aaccagaccc tgatgatcga
     5041 gccggaaact gacgaacccg cggcccagcg ccttgttgcg gtagacggtc tcgaacgtgt
     5101 tgtaatgcca gtgctggagc tcgccgacga attccggccc gaaggcgatg gtcagtcggt
     5161 caccctcctt gccgatccgg atctcgccgt acatgctgtc ggcgtaggtg gaaacgaagc
     5221 gatccagcgg cagcgagggc gaggttcccg ccacccggtc cgcctcgatg cggcgccgcg
     5281 cctcggcact ccgctcccgg ccggccttgg cctccttgag ataggcggcg ctccagtcct
     5341 tcaccggcgc gcccagatgt tgatcgatta cccgcatcgc gagcgccgtc ggaaggctcg
     5401 actcggacac gttggtgagc accacgaccc ccagcttccg ttccggaacc agcgcgacgt
     5461 acgccctcat gccgcggatg gcgccgccgt gggccaccaa cttgagcccg cggtagtccc
     5521 ggagcgacca ggccagccca taacccatga ggtgggattc gggccacagc ttctcgtcgg
     5581 tgtccgaggg ccggatgtgc atctggatgg tatgcatctc cttcacggtg gccgagtcga
     5641 tcagcttgcg tccgccgtag ctgccgcgtc ccagctggag gcggacccat tgcgccatct
     5701 cggcgacgct cgagttgatc gatcccgccg ggccgatatt gtcgatgttc atccactcca
     5761 ccggcgtcac cacgccctgg agtcgctcgt ggggcgtcgc cacgtcgctc agctgcttaa
     5821 gcggcaacgt gctggtgacg gtccgccgca tgccgagcgg ggtgaagatc cgttcctgga
     5881 cggcctggtc ccaggtatga ccactgaccg ccgcggccag ctgaccggcg gccagataca
     5941 tgatgttctg gtaaccgtag ttgctgcgca gactccaggt gggcttgagg taccgcaccc
     6001 gccgcagcac ttcctcccgg gtgaagccgg aggaggccca cagccgatcg ccgcgggtga
     6061 ggccgctgcg gtgggtgagc aggtcccgca ccgtgatttc gcgggtcaca tagggatcgt
     6121 agagctggaa gccgggcaga tgccgggtga ccggatcgtc ccagcggatc ttgccctcgt
     6181 ccaccagcat gccgagcaac gcggcggtga aggccttgct ggtgctgccg atggcaaaga
     6241 gggagttctc ggtgaccggg tcgggacgtc ccagttcccg caccccgtac ccgcgcgcca
     6301 gcacgacgct gtcgttgcga accaccgcga tggcgatgcc gggggcgtcc cagtcacgca
     6361 gggcctgggt cacgtaggga tcgaggccgc ggagcgggcc ctgctgcgcc aggaccggcg
     6421 aggcaccaag gaacaggacg gcggccgcaa gggcgcggcg agcgggcatg gggacctcct
     6481 ggagtgcgtt cttcgtatac gggatcgtat gcaatttgtt tcgggcgggg gcgaccagca
     6541 agtactgagg actgaggact aagtgggtgc ttggtgcgac gggctccttc ttcgtactca
     6601 gcactcggta ctcagtactt cttggaggta gattccagcg tcatgctgac caccgcgccc
     6661 gcgctcaaat acggtaccgt cgcccattgg gtggccgggc ggcgggcgcc gggacaggga
     6721 gagcgagttc cggtccacaa ccccgctacc ggaaccggca tcgcggaaac accgctggcc
     6781 acccggccgg aagtcgacac cgcggtcgcc gcggcccgga aggcgtggcc ggcctgggcc
     6841 gctaccccga tcaaggaccg ggttcaggtt ctctaccgtt atcgcgagct gctgcagcgg
     6901 cgccgggccg agctggcggc gctgatcacc gaagagcacg gcaagctgct cccggagtcc
     6961 gatgccgaga tcgcgcgggc catcgagctg acggaattcg cctgcgccct gccccagttc
     7021 gccaccggcg aggtgctgaa ggtcagccgc ggcatcgagt gccggctgga gcgtttcccc
     7081 ctgggcgtag ttgcgtcgat tggcccgttc aacttcccgg tgatggttcc tcactggacc
     7141 atccccaacg cgatcgccct gggtaattgt ctggtgctca agccctcgga gcgggtgccg
     7201 ctgtccgccc ttcagagcgc cgagctgttg gccgaagccg gattgccacc gggtgtcttc
     7261 acggtaatca acggggctcg agccgcggtc gaagcgctgt gcgatcatcc ggccatcgag
     7321 gcggtgacgt tcgtgggctc gacccccacc gcccaggcgg tctaccggcg tgcgacccac
     7381 agtctcaagc gcgccctggc gctgggcgga gccaagaatc acctggtggt gcttcccgac
     7441 gccgacccgg acaccacgcc ggcggcggtg ctgggctcgg cgatcggttg cgccggccag
     7501 cgctgcatgg ctgcctcggt catggtggcg gtcccgcgca ccgagggcat cctggagcag
     7561 gtgtgcgccc tggcccgggc tgcggttccg ggacgggact acggtccggt gatctcggcg
     7621 gccgcccgtg aacgcatcga gcaggccatc ggggccgcgg tctccgatgg ggcccggctg
     7681 ctggtcgatg gccgcggcat cagcccagcg ggaggcgaag ccgggttctg ggtgggcccg
     7741 accatcctcg acgacgtgcg gcccgacatg gccatcgcgc gtgaggagat cttcggtccg
     7801 gtactggcgg tgatccgagc gccgtcattg gatgccgcgc tcgacctgca agcccagtcc
     7861 ccctacggga acgcggccag cattttcacc cgcgacggcg gggccgcccg agagttgatg
     7921 gaacgggcca gcgccggcat gatcggtatc aacatcgggg tgccggtgcc ccgcgagccg
     7981 ttccccttcg gcggatggaa cgcgtcgaag tatggcgtgg gagacatcac cggccgcgcc
     8041 gccatcgagt tctttaccag ggcgaagaaa actaccgtgc agtggggtga ccggttctga
     8101 gctcgaggtg cgcggaggag atccttcgct tacgctcagg atgccgatac ccgcaaccca
     8161 gaaccctgaa ctctgcgtaa tgcctttatg acgaccactt ccgcacccct gacactgcct
     8221 cccacgtccc atgtccctcg accctacacc ggcccctccc gggccgaggt cctggcgctg
     8281 cgccagcagt tcaccaatcc cgcgatcttc acgctgtacc aatcgccgct gatgatcgtg
     8341 gaaggccggg gccagtacgt gtgggacgag accggccgcc gctatctcga cttcttcgcc
     8401 gggatcgtca ccctgtcgtg cgggcattct catcccaagg tggtggcccg ggtgcgggag
     8461 cagctggaaa cgctgcagca caccaccacc atctacctgc atcccaactt cccgcggctg
     8521 gcgcaggagc tggccgcgcg gatgccggag gggttggacg ttacctattt cgtcaacagc
     8581 gggagcgagg ccaacgatct cgcggtgacc ctgtcccgga tttacaccgg gaatatcgat
     8641 gtcatggcgc tccgcaacgc ctatcacggc ggtacccagg gcgcgatggg tctgacgtcg
     8701 catcacacct ggaagtacaa cgtggaatac ggcggccggg tccatcatgc gatcaacccc
     8761 gagccgtacc gcagtccctt cagcggcacg ccggaagaga ttgccagcaa gagcgtggcg
     8821 gatctgcgcg atgtgatccg ctattccacg cccggccggg tcgcggcgtt catcgcggag
     8881 ccgatcggcg gcgtgggtgg tgtgacgtat ggcgcgccta attacctgcg ggaagcctat
     8941 gcggtgaccc gcgagcacgg gggcctttgc atcgcggacg aggtgcagac cgggttcggc
     9001 cgcaccggcg agcatttctg gggctttcag aattggggcg tggtgcccga catcgtcacc
     9061 atggccaaga gcatcggcaa cggcctgccg ttggcagcgg tcaccactcg ccgggagatc
     9121 gccgaggcca tgacccagcg gcttcacctc aataccttcg gcggcaatcc ggtctcctgt
     9181 gcggcgggac tggccgtcct cgaggtgatc gatgaggagc agttgcagga gaatgcccgg
     9241 ggccagggag cccggctcaa gcgcgggctc gaggaactga tgagccggca tcacctggtg
     9301 ggcgatgtgc gtgggatggg gttgatgctg ggtgtggagc tggtcgaaga ccgtgccacc
     9361 cggattccgg cgagggccgc gaccacggcc gtgctggaga ccgccaagga tctgggcttg
     9421 ctgcttgggc gaggcgggct cgacggcaac gtgctccgga tcaagccgcc gctctgtatc
     9481 acggcggacg acgtcgacta cgcgctcgag gtgctcga
//
LOCUS       DASWKS010000124         3287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_425861, whole genome shotgun sequence.
ACCESSION   DASWKS010000124 DASWKS010000000
VERSION     DASWKS010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425861"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VGA78_03835"
     CDS             <1..522
                     /locus_tag="VGA78_03835"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893026.1"
                     /translation="RIDPVARDSVYRALKTMPAVSGVVLREAVLRGFEETIAESFMIS
                     ISMMVGFASVIAAGIVYNGARVALSERGRELASLRVLGFTRGEVARLLLGEQVLLTAA
                     GMPLGCLIGYGLAALVAYRFESNLFRIPLVVRPGPYLLGLAVVAAATAVSALAIRRRI
                     ERLDLVAVLKTRE"
     gene            525..1700
                     /locus_tag="VGA78_03840"
     CDS             525..1700
                     /locus_tag="VGA78_03840"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX9893027.1"
                     /translation="MKLRRKTWYWLAAGLLVGLALLRLLRSEPVQVDLAEVIIGPLVV
                     TVGDDGMTRVRDRHLVTAPVAGRVERIPLEPGDTVSRGTILAYLRPLPLDARGRAQAG
                     ATVAAAADGQRMAAAVAEQAESALQQATRERERAERLVEGGGMAPVEVERHRFAEQAR
                     QREVDAARFRARAAAHQVEVARAALLAAEPGAGSGHRLVLRAPEAGRVLAVPERSERV
                     VEPGTVLLELGDPSTLEVVVDLLSTDAVRVSAGDRMFLLGWGSDSTLEGRVRRVEPSG
                     FTKVSALGVEEQRVNVIGEFCDASGRLGDRYRVEARVILWDADRVLQVPPSALFRDGD
                     SWAVFLVDAGRAHLRRVTVGHESEAAAEILGGLSEGSLVIRHPTERIVDGVRVQSRQ"
     gene            1712..>3287
                     /locus_tag="VGA78_03845"
     CDS             1712..>3287
                     /locus_tag="VGA78_03845"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEX9893028.1"
                     /translation="MKVPTTLRGVSLIQDPRWNKGTGFTQQERDTLGLQGLLPPRVLT
                     MEEQLLRVRHNFKAKTSAIEKYIFLVGLQDRNEALFYRLVVDGLTEMMPLIYTPTVGE
                     ACKKFGHIFRRPRGLYLSINDRGRIRQVLRNWPDRHVAVIVVTDGERILGLGDLGAHG
                     MGIPIGKLSLYTACAGIHPFQCLPITLDVGTNNAGLRDDPLYTGLRQARCRGPEYDGF
                     IEEFVTAVDELFPGVLLQWEDFATENAIRLLVRYRDRLCSFNDDVQGTAAVVLTALLS
                     ACRVKQERLQDQRLLFLGAGASATGVAHLIVSAMVREGLSEAEARTRMWFVDSKGLIA
                     AGRDDLAPHKQPFAHPHPPVTDFLTAVETLLPTGIIGLSTQGGAFSEPIVRALAAANE
                     RPILFALSNPTSSSECTAEQAYRWTDGRALFASGSPFDPVSLDGRRYLSGQANNAYIF
                     PGLGLGIVLSQARRVTDGMFHEAARTVAESVSPANLAEGTLLPALDGIRELSVRIAAA
                     VARLASREGLARVDVPD"
BASE COUNT          461 a         1073 c         1179 g          574 t
ORIGIN      
        1 cggatcgatc cggtggcccg cgactcggtc taccgggcgc tcaagacgat gccggccgtg
       61 agcggggtcg tgctccggga agcggtgctg cgcggcttcg aggagaccat cgctgagagt
      121 ttcatgatct ccatctcgat gatggtgggc ttcgcctcgg tgatcgccgc cgggatcgta
      181 tataacggcg cccgggtggc cttgtccgag cgggggcgcg agctggcgag cctccgagtc
      241 ctgggcttca cccggggaga ggtggctcgc ctgctgctgg gggaacaggt cctcctgacc
      301 gccgccggca tgccgctcgg gtgtctgatc ggttacgggc ttgcggcgct ggtggcctat
      361 cgcttcgagt cgaatctgtt ccggataccg ctggtggtcc gtccgggacc gtacctcctt
      421 ggcctggccg tggtggcggc ggcgacggcg gtcagcgcgc tggccattcg gcgccggatt
      481 gagcggctgg acctggtcgc cgtactcaag acccgggagt agcgatgaaa ctccgtcgca
      541 agacatggta ctggttggcg gctgggctcc tggtgggact ggccttgctg cgcctgctac
      601 gatcggaacc ggtccaagtg gacctggccg aggtcatcat cgggccgttg gtggtgaccg
      661 tcggggacga cggaatgacc cgggtgcggg accgtcacct ggtgaccgcg ccggtggccg
      721 gacgggtgga gcgaattcca ttggagccgg gcgacacggt gtcgcgcggt accattctgg
      781 cgtacctccg tccgttgccg ctcgacgctc gtggccgggc ccaggcggga gccacggtgg
      841 cggcggctgc cgatgggcag cggatggcgg cggcggtggc ggagcaggcc gagagtgcgc
      901 tgcagcaggc cacccgcgag cgggagcggg ccgaacggct ggtcgaaggg ggtgggatgg
      961 cgccggtgga ggtcgagcgg caccgctttg ccgaacaggc tcgccagcgg gaagtggatg
     1021 cggcccgctt ccgggcccgg gccgccgcgc accaggttga ggtcgcgcgc gccgcgcttc
     1081 tcgccgctga gcccggcgcg ggtagcgggc atcgcctggt gcttcgtgcc cccgaagccg
     1141 gtcgggtgct ggccgtgccc gagcgcagcg agcgcgtggt cgaaccgggg acggtactgc
     1201 tggagctggg cgatccgagc acgctcgagg tcgtggtcga tttgctgtcc accgatgccg
     1261 tgcgggtgtc agccggtgac cgcatgttcc tgctgggatg gggcagtgac tcgacgctcg
     1321 aaggccgggt gcgccgggtg gaaccgtccg ggttcaccaa agtgtcggcc cttggcgtgg
     1381 aggagcaacg ggtgaacgtc atcggggagt tctgcgacgc gtccggccgg ctgggagacc
     1441 ggtatcgggt cgaggcgcgg gtgatactgt gggatgcgga ccgggtgctc caggtccctc
     1501 ccagcgcgct ctttcgcgac ggtgactcct gggccgtctt cctggtggac gccggccgag
     1561 ctcaccttcg tcgcgtcacg gtaggtcacg aatcggaggc ggcagcggag attctaggcg
     1621 gtctctccga gggctcgctg gtgatccgcc atccgaccga gcgcatcgtc gacggtgtgc
     1681 gagttcaatc ccggcaatag atattccacc catgaaagtc ccgaccacgc ttcgcggtgt
     1741 gtcgctcatc caggatcccc gctggaacaa ggggaccggc ttcacccagc aggagcgcga
     1801 taccctcggg ctccagggtc tgctccctcc ccgggtcctc accatggagg agcagctgct
     1861 ccgggtccgt cacaacttca aagccaagac cagtgccatc gagaagtaca tcttcctggt
     1921 gggtctgcag gaccggaacg aggccctgtt ctaccggctg gtggttgacg gcctgaccga
     1981 gatgatgccg ctgatctaca ccccgaccgt gggcgaggcc tgcaagaagt tcgggcacat
     2041 cttccggcgt ccccgcggac tctatctctc catcaacgat cggggccgga tccgccaggt
     2101 cctccgcaac tggcccgacc gccatgtcgc cgtcatcgtg gtgaccgacg gcgaacggat
     2161 tctcggtctg ggcgacctgg gtgcccatgg catgggcatt cccatcggca agctgtcact
     2221 ctacaccgcc tgcgccggga tccatccctt tcagtgtctg ccgattaccc tcgatgtggg
     2281 aaccaacaac gccgggctgc gggacgatcc gctctatacc ggcctgcgac aggcccgctg
     2341 tcgcggcccg gagtacgacg gattcatcga ggagttcgtc accgcggtcg atgagctctt
     2401 ccccggcgta ctgctgcaat gggaagactt cgccaccgag aacgccatcc gcctgctggt
     2461 gcgctaccgc gaccggctct gctccttcaa cgacgatgtg caggggaccg ccgcggtggt
     2521 gctcacggcg ctgctctccg cctgccgggt gaagcaggag cggttgcagg atcagcgtct
     2581 gttgttcctg ggcgccggcg cgtcggccac cggcgtcgcc cacctgatcg tgtccgccat
     2641 ggtgcgcgag ggactctccg aggcggaggc tcggacgcgg atgtggttcg tcgattcgaa
     2701 gggactgatc gcggcaggcc gtgacgacct tgcgcctcac aagcaaccgt tcgcccaccc
     2761 ccacccgccg gtgactgact tcctcaccgc ggtcgagacc ctgctgccga ccgggatcat
     2821 cgggctctcg acccagggcg gggcgttttc cgagccgatc gtacgggcgc tggcggcggc
     2881 caatgagcgg cccattctct tcgcgctctc caaccccacc tccagctcgg agtgcaccgc
     2941 ggagcaggcc tatcgctgga ccgacggacg ggccctcttt gccagcggca gtccattcga
     3001 tccggtgtcg ctcgacggac gccgctacct ctcgggccag gccaacaacg cctacatctt
     3061 cccgggattg ggtctgggaa tcgtcctgag ccaggcccgg cgggtgacgg atgggatgtt
     3121 ccacgaggcg gcccgcaccg tggccgagtc cgtctcgccg gccaatctgg cggagggcac
     3181 gctgcttccg gcgctggacg gtattcgcga gctctcggtc cgcatcgcgg ccgcggtggc
     3241 ccggctggcg tcgcgcgaag gcctggcccg ggtagatgtg cccgacg
//
LOCUS       DASWKS010000125         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2647931, whole genome shotgun sequence.
ACCESSION   DASWKS010000125 DASWKS010000000
VERSION     DASWKS010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2647931"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1446
                     /locus_tag="VGA78_03850"
     CDS             <1..1446
                     /locus_tag="VGA78_03850"
                     /inference="COORDINATES: protein motif:HMM:NF022039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 catalytic
                     domain-containing protein"
                     /protein_id="HEX9893029.1"
                     /translation="RDGRTFLVIHEANLVDYARMNLAGQRGESRTLLAALAPMADGIK
                     VRGRTPFVTPWRTIQLADRATDLAPSLLSLNLNPPNALGSTDWITPMKYVGIWWGMHI
                     NTMTWSSGPQHGATTANAKRYIDFAAANGFGGVLVEGWNTGWDGDWIANRNAFSFTRA
                     YPDYDLAAVAAYARQRGVRLIVHNETSGGIQNYERQIDSAFALYRSLGLDALKTGYVT
                     DTTAEGHSHWSQFMVRHYRRVIETAARHGIMLDAHEPMHDTGERRTWPNMMTREGARG
                     QEYNAWSGDGGNPPEHETILFFTRLLAGPMDFTPGVFDLLIERGSGRPRRPEEPRVRT
                     TLAKQLALYVTIYSPLQMAADLPENYERQPAFQFIRDVAVDWDTTRVIDARIGDYVVV
                     ARRERGGQTWFLGAITDEEGRTLDVPLSFLRPGRRYVAEIYADGPKAHWLDNPLPVTI
                     IRRPVTSATRLRVVLAPGGGQAIRIRPAGVP"
BASE COUNT          258 a          515 c          506 g          232 t
ORIGIN      
        1 cgggacggac ggaccttcct ggtcattcac gaagcgaacc tggtggatta cgcccggatg
       61 aacctggccg ggcaacgggg ggagagtcgc acgctgctgg cggccctggc gcccatggcg
      121 gacgggatca aggtgcgcgg ccgcacccca ttcgtgacac cctggcgaac gatccagctg
      181 gccgaccggg ctaccgacct cgcgccctcg ctgctgagct tgaacctcaa tccgcccaat
      241 gcactcggca gcaccgactg gatcacaccc atgaagtacg tgggcatctg gtggggcatg
      301 cacatcaaca ccatgacctg gagctcgggg ccccagcacg gcgcgaccac agccaatgcg
      361 aagcgataca tcgactttgc cgcggccaac ggtttcggag gcgtgctggt ggaggggtgg
      421 aacaccgggt gggacggcga ctggatcgcg aaccggaatg cgttctcttt cacccgggcc
      481 tatcccgact acgacctcgc ggccgtcgcc gcctatgccc ggcagcgggg cgtgcggctg
      541 attgtccaca atgagacttc gggcggaatt cagaactacg aacggcagat cgacagcgcc
      601 tttgccctct atcggtcact gggcctcgat gcgctcaaga ccgggtacgt cacggataca
      661 accgccgaag gccattcgca ttggtcgcag ttcatggtgc ggcattaccg gcgcgtgatc
      721 gagacggctg cgcggcatgg catcatgctg gacgcccacg agcccatgca cgacaccggg
      781 gagcgccgca cctggcccaa catgatgacg cgcgaaggcg cccgggggca ggagtacaac
      841 gcctggagcg gggacggggg caacccgccg gagcacgaga ccatcctctt cttcacccgt
      901 ctgctggccg ggcccatgga ctttaccccg ggggtcttcg acctcctcat cgaacgcggc
      961 agcgggcggc cgcgccgccc ggaggagccc cgggtgcgca ccacactggc gaagcagctc
     1021 gccctctacg tgacgatcta ctcaccgctc cagatggcgg ccgatcttcc cgagaactac
     1081 gagcggcagc ccgccttcca gttcatccgc gatgtcgcgg tggactggga caccacccgc
     1141 gtgatcgacg ctcgcatcgg cgattacgtg gtggtggcgc gccgggagcg cggtgggcag
     1201 acctggttcc tgggcgcgat tacggacgag gaagggcgca ccctggacgt cccgctctcg
     1261 ttcctgaggc cgggccggcg gtacgtggcc gagatctatg ccgacggccc caaggcgcac
     1321 tggctggaca atccgttgcc ggtcaccatc atccggcgcc cggtgacctc cgccacgcgg
     1381 cttcgcgtcg ttctggcgcc cgggggtggc caggccatcc gaatccgtcc ggcgggagtg
     1441 ccgtgatcgt tgcggaggcg accgctgact ccccgtggcg ccatcagcga ctggaccacc
     1501 cagcagtggg t
//
LOCUS       DASWKS010000126         2816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1539537, whole genome shotgun sequence.
ACCESSION   DASWKS010000126 DASWKS010000000
VERSION     DASWKS010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539537"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VGA78_03855"
     CDS             complement(<1..494)
                     /locus_tag="VGA78_03855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893030.1"
                     /translation="MSCTGDTAVPTSSDTDAGIIAAKGGDPGAPTTAVLRFGNSVGTT
                     RFGPEHPSSHARDNISPNTVVIQAGGTVTFEVLAPHKVAIYEPGVEPEDIRLIPGVTL
                     FDQVGPPGPPLVPNFFIDEPIGRIFLDPAAAFGPPHSVDWTFDDPGRYLVICAVTPHF
                     TAFK"
     gene            977..1171
                     /locus_tag="VGA78_03860"
     CDS             977..1171
                     /locus_tag="VGA78_03860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893031.1"
                     /translation="MTARLRPDSASIYPSLDPSRWYLVTAWDGVDGLWLEVNDQQMYV
                     SERHFEAREGGLDPVPPAAE"
     gene            complement(1386..1459)
                     /locus_tag="VGA78_03865"
     tRNA            complement(1386..1459)
                     /locus_tag="VGA78_03865"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1423..1425),aa:Pro,seq:tgg)
     gene            1528..2049
                     /locus_tag="VGA78_03870"
     CDS             1528..2049
                     /locus_tag="VGA78_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893032.1"
                     /translation="MGRHWLGLVLALGAGSGVAAQQGVAIRPGRMMYVSLDTVDTPTV
                     FPGTGASVYRKLIEVYRALKIPISLYDSTTGKVGNIGVNLRSIDGQRMSTWLGCGVGL
                     TGPNADMHRVTASIISWVQPRGRDSAVVRTGVFAGVTNMAEAGSSLPRPCDTTGRLEE
                     RIRTLLRRRLAAP"
     gene            complement(2054..>2816)
                     /locus_tag="VGA78_03875"
     CDS             complement(2054..>2816)
                     /locus_tag="VGA78_03875"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX9893033.1"
                     /translation="RLRTRLEAGQLCVGTMLVEVRQPSVMSILANAGFDFVLVDNEHG
                     QFGIETIADLSRSARSEGLTPIVRIPELAYAHVAQALDGGAQGIMLPRVTSSEQVQEC
                     LRFMKYAPEGKRGAVLARGHTAFRVGPLLETLAAMNRETFLLVQIETAEAVERLNEIL
                     PIKGVDAALVGPTDLSVSLGVGGQMDHPTLVAAIERTLAACREHGVVPAIHTNDTAMT
                     AAWARRGMRMVSINSEVGLLTSAGRQAVAAIRTPD"
BASE COUNT          479 a          906 c          967 g          464 t
ORIGIN      
        1 atcttgaagg ccgtgaagtg gggggtaacg gcacagatca cgaggtagcg gccgggatcg
       61 tcgaacgtcc agtccaccga atggggtggt ccaaaggccg ccgcaggatc gaggaatatc
      121 cggccgatgg gttcatcgat aaagaagttc ggaaccaacg gcgggcccgg cggccccacc
      181 tggtcgaaca gagtcacgcc tggaataagc cggatgtctt cgggctcgac cccgggctca
      241 tagatcgcca ccttgtgcgg ggccaggacc tcgaacgtga ctgtcccgcc ggcctggatc
      301 accaccgtgt tcgggctgat gttgtcccga gcgtgggacg aggggtgctc gggcccgaac
      361 cgggtcgtcc ccaccgaatt gccgaagcgg agtacggcgg ttgtcggggc gccgggatcg
      421 ccccccttgg ccgcaatgat cccagcatcg gtgtcggagc tggtcggaac agcggtgtcg
      481 ccggtgcagc tcatggccag cagggcggct agtgcaactg gaccgagtct tcccagactg
      541 cgaggtcttg ccgttgtcat aggcgttctc ctgaaaccgt ggctgggtag gttggggagg
      601 gatactacgg cgcgggtcgc gcctttgcca gagtcgcgac agtgccacac cctcgacggt
      661 ctctgtgacc gggaggcggg tggtaggggg gtacggcggt taaggcggtt cgagagggtg
      721 cagagccgag tcacggcgcc tgcaccgccc taaccgcctt aaccgcctta accgcctcaa
      781 ccgccctaag gccgccccag ggcattgcat cgacgcacac cccatgacgc tgatacctat
      841 agcgcaggct gcggagcgaa ggcatcgtac gccagatgat cccgtgcgca acccgtaccc
      901 actggccggc ggttgccgag gtcctcgtcg tttctaatga ggagggaaag cccgaatgca
      961 tggagacttc cggtagatga ccgcccggct ccgccctgac agcgcgagca tctacccgtc
     1021 actggacccg tcccgctggt acctggtgac cgcctgggat ggcgtcgacg gactgtggct
     1081 cgaggtgaat gaccagcaga tgtacgtctc ggagcggcat ttcgaggcgc gggaaggggg
     1141 gctggacccg gtgccgccgg cggctgagtg aggggctttg tgaccacacc cctgccgaaa
     1201 ctgttaccac accagcgccg gccgccctgg cccggacgcg gaagggacat actggagatg
     1261 atttagggaa gtcggggcgc cgggatttgc ttgccgcatc acgagccctt ggcgagtggc
     1321 cgcaacccca agcggggcgg tccgaacgag aaggagcggg gccaaatggc tccgctcctt
     1381 ctaaatcggg gcgccgggat ttgaacccgg gacctcctgc gcccaaggca ggcgcgctac
     1441 cgggctgcgc tacgccccgt ccggttgatt tgcgccagca aaatagcagg ttccccagca
     1501 ggtaaatggg tcaaaccggg atgtgctatg gggcgacact ggttgggact ggttctggct
     1561 ctgggggcgg gttcaggggt tgcggcccag cagggtgtgg cgatccggcc cggccggatg
     1621 atgtatgtct ccctcgatac cgtcgacact cccaccgtct tcccgggcac gggggcctcg
     1681 gtgtaccgga agctgatcga ggtctatcgg gccctcaaga ttcccatctc actctacgac
     1741 tccaccaccg ggaaagtcgg aaatatcggg gtgaacctcc gctccatcga cgggcaacgg
     1801 atgtccacct ggctcgggtg tggcgtgggg ctgaccgggc cgaacgccga catgcaccgg
     1861 gtcaccgcgt cgatcatctc atgggtccag ccccgagggc gtgattccgc cgtggtgcgg
     1921 accggcgtgt tcgccggggt caccaacatg gccgaggcgg gatcgagtct gccccgaccc
     1981 tgcgatacca ccggccggct ggaagagcgg atccgcaccc tgctgcgccg gcgattggcc
     2041 gcgccctgac cgatcagtcg ggagtcctga tcgccgccac ggcctgccgc ccggccgacg
     2101 tgagcaggcc cacttcgctg ttgatactca ccatgcgcat ccctcgccgg gcccaggccg
     2161 cggtcatggc ggtgtcgttg gtgtgaatcg cgggcaccac gccgtgttcc ctgcaggccg
     2221 ccagagtgcg ctcgatggcc gcgaccagag ttggatgatc catctgcccc cccacgccga
     2281 gcgagaccga cagatcggtg gggcccacca gggccgcatc gactcccttg atgggcagga
     2341 tctcattgag ccgttcgacc gcctcggcgg tctcgatctg caccagcagg aaggtctccc
     2401 ggttcatggc ggcgagggtc tcgagcaggg gtcccacccg gaaggccgtg tggccccggg
     2461 cgagcacagc gccccgcttc ccctcggggg cgtatttcat gaagcggaga cattcctgga
     2521 cctgttccga actcgtgacc cggggcagca tgatgccctg ggcgccccca tcgagcgcct
     2581 gggccacatg agcataggcc agctcgggga tccggacgat cggggtcagg ccctccgagc
     2641 gcgccgagcg gctcaggtcg gcgatggtct cgatgccgaa ctggccgtgc tcgttgtcca
     2701 ccaggacgaa gtcgaacccc gcattggcca gaatgctcat gaccgaaggc tggcggactt
     2761 ccaccagcat ggtgccgaca cagagctgcc ccgcctcgag ccgggtgcga aggcgg
//
LOCUS       DASWKS010000127         9803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1539948, whole genome shotgun sequence.
ACCESSION   DASWKS010000127 DASWKS010000000
VERSION     DASWKS010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9803
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539948"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VGA78_03880"
     CDS             <1..525
                     /locus_tag="VGA78_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893034.1"
                     /translation="PPSIRGLDFGRDERELQSGEYFIGPNWACAAAPVRQVGGFDPRM
                     GLGATNGPPGGEEIDLMERLAGAGLRSWYVPAARLRHRVPPDKASEAHIKARWAAFAA
                     VQAWKGTTRYNTFRINRVPWRLYPEFALAALQRVAAVAGIGDQMDAEVRLVWCRGLWA
                     GFRLPPREPEVGNP"
     gene            complement(588..2006)
                     /locus_tag="VGA78_03885"
     CDS             complement(588..2006)
                     /locus_tag="VGA78_03885"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX9893035.1"
                     /translation="MTVRPSVPPIIQGGMGVGISDWRLAQAVSRRGQLGVVSGTALDT
                     VMVRRLQDGDVGGHVRRAMAEFPIPDVAAEVRRRYFRPEGREPGMPYKMLPMYQQAMS
                     QSRQLLTMLAAFVEVYLAKQGQQQGVVGMNLLTKVQIPTLPALYGAMLAGVDVILMGA
                     GIPREIPAALDHLAQHQMASLRFEVEGLPSGREERLILDPKGFWTLPPPELRRPLFLA
                     IIASNSLATMLARKASGRIDGFVIEGPTAGGHNAPPRGEPRFNEHGEPQYGERDVVEL
                     AKISELGLPFWLAGGAGRKGRLPEALAAGASGIQVGTLFAYCEESGLAEGLKRSILAH
                     AARGEVTVRTDPRASPTGYPFKVVSWPGGPGDGVARERRCDLGGLRAAYCTPQGRIGY
                     RCPAEPVAAYVKKGGKVEDTVGRRCLCNALTADIGLGQIRANEEVEPPLVTSGDDLES
                     IGEFLAGRTRYTAGDVLDYLVG"
     gene            complement(2003..2911)
                     /locus_tag="VGA78_03890"
     CDS             complement(2003..2911)
                     /locus_tag="VGA78_03890"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX9893036.1"
                     /translation="MRTGRPGAASLTLLLILLITAAWWALALWPAGAIEPVWLMRTRA
                     ACFGSSPGGLPDAGGWILLIGEPIGMLGALLLVWGGALRDDLRRIGADRRWRWVMAAV
                     AVVSVVYPVLLGVRVALALGFGAPRAATPAGASSPMDIDASGFVLTDQYGGRISLAGI
                     GGRPALLIFAYGHCTTVCPTLVHEARTARVAANRLDVPLVVVSLDPWRDTPERLRFLA
                     SAWQLGPEDRVLSGSVQEVERTLDALGVGRRRDGTTGDIDHIGTVMALDDRGHIVGRI
                     DGGWGRVRELLAAISPSGGQSLGRKP"
     gene            complement(2917..4662)
                     /locus_tag="VGA78_03895"
     CDS             complement(2917..4662)
                     /locus_tag="VGA78_03895"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX9893037.1"
                     /translation="MTAPSTAAFRICPTTGRTIHLQAERLVKANAVVAVVALLVGAIA
                     ALMLVLTRWQAVHLLPAVWYYRLLGVHGMNMLIFFIIYFEMAVLWFAATVLLNARPAA
                     PKLGWFNFGLMVMGTLLVQWAQWSGRADVLFTSYPPLKAHPLFYLGIIFFAVGALLVV
                     CQFFATLVIAKREQTYRGSMPLVVYGAMTAAIIAVITLVHGALVYIPTFLWSVGLIAS
                     VDPQLYRMLWWGLGHSSQQINVAAMVAIWYMLGGLTVGSVVLNEKVSRSAFVLYILFI
                     SMASAHHLLVDPGFGSAWKIVNTSYFMYLAVLASMVHGFTVPAGMELGMRLRGFTDGL
                     FGWLRRAPWGDPGFSSLVLSIVVFGFVGGITGVTIGTEQINIIAHNTMRIPGHFHSTV
                     VSGTALAFMGTTYYLLPLIFRRKVAFWKLARLQPYLFAGGLLLLVMGMTFAGSFGVPR
                     RHWDISFSQAPFDVQFSPAVDLFLAMMGIGGIIAVTGALSFILIAVKSVFFGEPVTEF
                     ARGQAIAGIPQGLTTPPTHAADVDAVNEALHAPARGIAGATPGTLVLVGVFLLAFMLY
                     YFTNWKLLSFLWKIG"
     gene            complement(4659..5264)
                     /locus_tag="VGA78_03900"
     CDS             complement(4659..5264)
                     /locus_tag="VGA78_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893038.1"
                     /translation="MLTKVHTGLDPVPGIWWRPAHKAEKVWVAIAFGWCLVLFAMMPL
                     WHYRGGQNPSGVRRRVEPKAFYARTVAFTNQYKVGEDQGIPIVQPPPGADVYLVGLTF
                     QWYPILKLERGKEYMLHLSSLDVNHGFSLFPLSINFQVVPGYDYGLRVTPTASGDFRI
                     ICNEFCGIGHHTMVGRVIVVDATGQPVADNANARVGSGGAR"
     gene            complement(5275..5448)
                     /locus_tag="VGA78_03905"
     CDS             complement(5275..5448)
                     /locus_tag="VGA78_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893039.1"
                     /translation="MPPVPDSPRESQERPPLGQRLYDNVFLLLALGLLIMFVVYTGWG
                     VWEIVSMPMATLP"
     gene            complement(5485..5904)
                     /locus_tag="VGA78_03910"
     CDS             complement(5485..5904)
                     /locus_tag="VGA78_03910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX9893040.1"
                     /translation="MWLNSTAQTALRAVLHIAEHAGEGSVRVDDIATSLRTPRNYLSK
                     TLHALARAGVLRSARGPKGGFQLADPPGRLVLSRVIGPFTPAGERRCLVGRADCGDAH
                     PCLAHHRWSRVARGVEDFFGETTVADLLAQPSRTRAL"
     gene            5973..7526
                     /locus_tag="VGA78_03915"
     CDS             5973..7526
                     /locus_tag="VGA78_03915"
                     /inference="COORDINATES: protein motif:HMM:NF012263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase iron-sulfur subunit"
                     /protein_id="HEX9893041.1"
                     /translation="MPLFRRLLTGLDAGFTKLYGSARNPLHQTGTVAVAMLLVLLGTG
                     LYLVFFYRLGSPAASVARLAADPWLGSWMRTLHRYASDLFVIAAALHAVRMLVQGRSW
                     GPRTLAWMSGLFLFGAGLVCAWTGFVMAWDSFGERLALEGGRLLDVLPIFSEPLSRIF
                     AGDGPVPSAFFFVNLFVHIALPLLMGAGLWLHVSRLARPVLLPPRRLMWGIIGGLTIA
                     SVLLPASLGPAADPLRLAPSTPTDFVVAWWLPLVEGLPPSAAWSVILAPILLPLMVPW
                     LTRRRREAGWAPSAVDTRLCTGCNQCPQDCPWEAITMVPRDDDRTTFVARVNPSRCVS
                     CGICAGSCAPMGVGPPGRSGRDQLAMLRDITLPALAAAGTVPTVAVCCAQAPAAHHSA
                     LRVLGAHVHLVPCVGNLHSSVVELFIRSGAPGVVVCGCPPRDCLGREGPKWLHERLFN
                     DREAELQPRVDRRRVRTATLAPGDLAGTVAAFEQFTRELAALAPPQPEWDTDINDLCD
                     PVPLEEATK"
     gene            7523..8152
                     /locus_tag="VGA78_03920"
     CDS             7523..8152
                     /locus_tag="VGA78_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893042.1"
                     /translation="MNPVRILTAGAATAAALSLLAYASAVPLAYHPQDAARLRLSWSA
                     RPERIEVCRQLSTEAQARRGEHMRQRVECVGGFATYALRVEVDDRAVDESVIHGAGLR
                     HDRPLYLLRDYSVPPGQHRIRVTLTRQEKVDTNPAAPAEAAALEADTGLYAGRSQREA
                     TERARRERAAIPPSLVMDTTFEFRPRRVALVTFNAGLRILELRAEALQR"
     gene            complement(8172..8993)
                     /locus_tag="VGA78_03925"
     CDS             complement(8172..8993)
                     /locus_tag="VGA78_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893043.1"
                     /translation="MHRWLTAWFVVCVGSTPAAAQPKVIVEIRASIPAEGGRRLPVIG
                     RFWLVWARDSVPIITNAQGVGRAEASAGSYRVRSYQGVGVGALKYYWDVPVGLTRGML
                     LELSERNAQPTPATGPVSAILPEEGPATSIAAPALPDHAPASIQATLAAPPPPFRQPG
                     DPGYKDPNVGTLFGVLVPGGGHLYAGEVGKGLGILAVGGLGASLLISQLSCGGSEACD
                     GPMIGFGALLYLGGAIYSIVDAAPAARRANQLVPEFAVRFLPQGRLGVGLEVPLP"
     gene            complement(9105..>9803)
                     /locus_tag="VGA78_03930"
     CDS             complement(9105..>9803)
                     /locus_tag="VGA78_03930"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9893044.1"
                     /translation="LFFPGSDSHARLRFYDRHLAQDGTVIAGRLGVEPESSREAGLPG
                     VAVTLLPVLDPPRVSPWSRVFRSGEGWQPPNGYGWSDVTGSRSRSCRVVLNLEQRPVR
                     ENRIVLDQAVDCFGIPRPCLHLTWSAAEQQELDRLRHSLQGWFQAAGLGRLEFEAGTP
                     PDLNAHHHAGTTRMHEDPGGGVVDPDLRVHGLENLFVTGGSVFPRAGWANPMLTVVAL
                     SLRLADHLSGVLDG"
BASE COUNT         1769 a         3359 c         3163 g         1512 t
ORIGIN      
        1 ccgccttcga tccgagggct ggacttcggc cgggatgagc gagagctgca gagtggtgaa
       61 tacttcatcg gtcccaattg ggcctgcgcg gcagcgccgg ttcgccaggt cggtggattt
      121 gatccgagga tgggactcgg ggccacgaac ggcccgcccg gaggcgaaga gatcgatctc
      181 atggaacgcc tggccggcgc cggcctccgg agctggtacg tcccggcggc tcggctccgg
      241 caccgagtcc cgcccgacaa agccagtgaa gcccacatca aggctcgttg ggcggcattc
      301 gccgcggtgc aggcctggaa gggcactacc cgctacaaca cctttcgaat caaccgggtg
      361 ccttggcggc tctaccccga attcgccctg gcggcactgc agcgggtcgc cgcggtcgcg
      421 ggcatcggag accagatgga cgccgaagtg cgcctggtct ggtgccgggg tctctgggcg
      481 ggcttccgcc ttccgcctcg agagccagag gtcggcaatc catgagggcg aggtcaagga
      541 ctgccccacc tttcgcctgc tgaggcctgg gcggcgctgc caaggcgcta gccgaccagg
      601 tagtcgagca cgtcaccagc tgtgtagcgg gttcgcccgg cgaggaattc tccgatcgac
      661 tccagatcgt ccccgctggt aacgagtggg ggctccacct cctcattggc gcggatctgc
      721 ccgagaccga tgtccgcggt cagggcgttg cagagacacc ggcgccccac cgtgtcttcc
      781 accttaccgc ccttcttgac atacgcagcg accggctcgg cgggacagcg atagccgatc
      841 ctcccttgcg gcgtgcaata ggcggcccgg agaccgccga gatcgcagcg acgttcccga
      901 gcaacgccgt cacccggccc gcccggccag ctcactacct tgaacggata cccggtgggg
      961 gaagccctcg ggtcggtccg caccgtcacc tcgcccctcg ccgcatgggc caaaatcgaa
     1021 cgcttgagtc cttctgcgag tccggattcc tcgcaatagg cgaagagcgt tcccacctgg
     1081 atgccggatg cgccggccgc cagggcttcc ggtagtcgac ctttccgtcc ggctccgccc
     1141 gccagccaga acggaagacc aagctccgag atcttcgcca gctccaccac gtcccgctcc
     1201 ccatactggg gctcgccatg ttcgttgaag cggggctctc ctcgcggtgg agcgttgtgg
     1261 cctcccgcgg tcgggccctc aatgacgaag ccgtcaatgc ggccgctggc cttgcgggcg
     1321 agcattgttg cgagggagtt gctggcgatg atggcgagaa acagggggcg gcgaagctcc
     1381 ggcggcggca gcgtccagaa tcccttcgga tccaggataa ggcgctcctc tcggccggac
     1441 ggaagtccct cgacctcgaa ccgcaacgag gccatctggt gttgcgccag atggtcgagc
     1501 gcggcgggga tttcccgggg aatgcccgca cccatcagga tgacatccac gccggccagc
     1561 atggcgccgt atagagcagg cagggtcggg atctggacct tggtaagcag attcatccca
     1621 accaccccct gctgctgccc ctgctttgcc aggtatacct cgacaaacgc tgcgagcatc
     1681 gtcagcagct gtcgcgactg gctcatcgcc tgctggtaca tggggagcat cttgtacggc
     1741 atgccgggct cccggccctc gggccggaaa tagcggcgcc gcacctcggc ggcgacatcg
     1801 gggatgggga actcggccat ggcccggcgc acgtggcccc cgacatctcc gtcctgcaac
     1861 cggcgcacca tcaccgtgtc gagcgcggtc ccggaaacaa ctcccagctg ccctcgccgg
     1921 gaaaccgcct gcgccaggcg ccaatccgag atgcccactc ccatcccacc ctggatgatc
     1981 gggggaaccg aagggcggac ggtcatggtt tccggcccag gctctggccg ccggacgggg
     2041 aaatggcggc cagcaactct ctcacgcgac cccacccgcc gtcgatcctc cccacaatgt
     2101 gaccccgatc gtccagggcc atcaccgtgc cgatgtgatc gatatctcct gtagtgccgt
     2161 cccgccgccg tccgaccccg agggcatcga gcgttcgctc gacctcctgg acactccccg
     2221 agagtacccg gtcctccggg cccaactgcc acgccgacgc aagaaatcga agacgctccg
     2281 gcgtatcacg ccacggatcc agtgacacga ctaccagagg cacgtcgagc cgattggcag
     2341 cgacgcgagc ggtgcgggcc tcatgcacca gcgtggggca cactgtggtg cagtgaccat
     2401 aggcaaagat caggagcgcc ggccgccccc cgatccccgc cagcgagatg cgcccgccgt
     2461 attggtccgt caggacgaaa ccggacgcat cgatgtccat cgggctcgag gcgccggcag
     2521 gtgtggccgc ccggggcgct ccgaacccga gtgcgagtgc cacgcgcacc ccgagcagca
     2581 ccggatagac gacggacacc actgcaaccg ccgccatgac ccagcgccac ctgcgatcgg
     2641 caccgatccg ccggaggtca tctcggagcg cgccccccca gaccaggaga agtgcaccca
     2701 gcatcccgat cggttccccg atcaggagaa tccacccccc ggcatcgggc aagccgccag
     2761 ggctcgaccc gaagcaagcg gcacgggttc gcatcaacca gaccggctca atcgcgccgg
     2821 ccggccagag cgcgagggcc caccaggctg ccgtgatcag caggatcagc aggagcgtga
     2881 gcgacgcggc gcccggccgt ccagtccgca tccggatcag ccgatcttcc agaggaagct
     2941 gagcagcttc cagttcgtga agtagtagag catgaatgcc aggaggaaca ctcctaccag
     3001 gaccagggta ccgggtgtgg cgcccgcgat cccgcgggcg ggggcatgaa gcgcctcatt
     3061 gaccgcatcg acgtcggcgg cgtgagtcgg cggggtggtg agcccctgcg ggatgcccgc
     3121 tatcgcttgg ccccgcgcaa actcggtcac cggctcgccg aagaacaccg acttcaccgc
     3181 gatgaggatg aacgacagcg cccccgtcac agcgatgatg ccgccgatac ccatcatggc
     3241 gagaaagaga tcgaccgcgg gactgaactg gacgtcgaat ggcgcctgcg agaacgagat
     3301 gtcccaatgg cggcgcggta cgccgaagct gccggcgaag gtcatgccca tgaccagcag
     3361 aagcaggccg ccggcgaaca ggtaaggctg gagcctggcg agcttccaga aggcaacctt
     3421 ccgccggaag atcagcggca gcaggtagta ggtcgtgccc atgaaggcga gcgccgtacc
     3481 gctgactacc gtcgagtgga agtgccccgg aatccgcatc gtgttgtgcg cgatgatgtt
     3541 gatctgctcg gtgccgatcg tcaccccggt gatgcccccc acgaaaccga acaccacgat
     3601 cgaaagcacc agggaggaga agcccggatc gccccaaggg gcacggcgga gccagccgaa
     3661 gagcccgtcg gtgaagccgc gcagccgcat gccgagctcc atacccgccg gcacggtaaa
     3721 gccgtggacc atcgaggcga gcacggccag atacatgaag taggaggtgt tcacgatctt
     3781 ccaggcggag ccgaacccgg gatcgaccag caagtggtgc gccgaggcca tcgaaatgaa
     3841 cagaatgtag agcacgaagg ccgagcggct caccttctcg ttcaggacca ccgacccgac
     3901 ggtgagcccg cccagcatgt accagatggc gaccatcgcg gccacgttga tctgctgcga
     3961 tgaatgcccg agtccccacc acagcattcg gtagagctgc ggatcaactg aggcgatcag
     4021 gcccaccgac cagaggaatg tcgggatgta caccagcgcg ccgtggacca gcgtgatcac
     4081 cgcgatgata gccgccgtca tggcgccgta caccaccaac ggcatcgagc cccgatacgt
     4141 ctgctcccgc ttggcgatca ccagggtggc gaagaactgg cagaccacca gcagtgcccc
     4201 caccgcaaaa aagatgattc caagatagaa cagcgggtga gccttgagcg gaggatacga
     4261 cgtgaacaac acgtccgccc gcccgctcca ttgggcccac tggaccagca gtgtccccat
     4321 caccatcagg ccgaaattga accacccgag cttcggcgcc gccggccgag cgttgagcag
     4381 gacagtggcg gcgaaccaga gcaccgccat ttcaaagtag atgatgaaaa agatcagcat
     4441 gttcatgccg tggacaccga gcagccgata gtaccacacc gccggaagga gatgcacggc
     4501 ctgccagcgc gtcagcacca gcatgagggc ggcgatggcg ccgaccagca gggccacgac
     4561 cgccaccacc gcattcgctt tgaccagtcg ctcggcctgc aggtggatcg tccggccggt
     4621 cgttggacag atccggaagg cggccgtcga gggcgcggtc atcgggcacc tccggaaccg
     4681 acccgggcgt tcgcattgtc ggccaccggc tgcccggttg catcgaccac gatcacccgg
     4741 ccgaccatgg tgtggtggcc gataccgcag aattcgttgc agatgatgcg gaagtcaccc
     4801 gacgccgtcg gggtcacccg cagtccgtag tcgtagcccg gcaccacctg aaagttgatg
     4861 ctcaacggga agagcgagaa cccgtgattc acgtcaagcg acgacaggtg cagcatgtac
     4921 tctttgccgc gctccagctt gaggatcgga taccactgga aggtgaggcc gaccaaatag
     4981 acgtcggcac ccggaggcgg ctggacgatc ggtatcccct ggtcttcgcc gaccttgtat
     5041 tgattagtga aggccactgt gcgggcgtag aaggccttgg gttccacccg ccgccgaacg
     5101 cccgacgggt tctgcccgcc gcgatagtgc cacaacggca tcatcgcgaa cagcaccaag
     5161 caccagccga aggcgatggc gacccagacc ttctccgcct tgtgggccgg cctccaccag
     5221 atgcccggca ctgggtcgag gccggtatga accttggtca gcatcacgac ctcattatgg
     5281 aagggtggcc atcggcatcg agacgatttc ccacacgccc caaccggtgt agaccacgaa
     5341 catgatcagc aggccgaggg cgagtagcag aaagacattg tcgtagagcc tctgcccaag
     5401 gggcggacgc tcctgcgact ctcgggggga atcgggcacg ggcggcatgg tagatcctcc
     5461 tttcgatggt cgaacgggat cggttcagag ggcccgggtt cgggagggct gcgccaacaa
     5521 atcggccacc gtcgtctcgc cgaagaagtc ctcgacaccg cgcgcaacgc gggaccagcg
     5581 gtgatgcgcc agacagggat gtgcgtcacc gcagtccgcc cggcccacca gacatcgccg
     5641 ttcaccggcg ggcgtgaagg ggccgatcac acgagacaag acaaggcggc cgggaggatc
     5701 ggccagctgg aatcctccct tgggcccccg ggccgagcgc agaaccccgg ctcgggccag
     5761 ggcgtgcaac gtcttggaga ggtagttgcg cggggtccgg agggatgtgg cgatgtcgtc
     5821 cactcgcacg gacccctcgc cagcatgttc ggcgatgtgc aacacagcgc ggagcgcggt
     5881 ctgagcggtg ctgttgagcc acattggcgg tgaccatgtg tcagaatgtt gctaacctca
     5941 tgatgatatg ataaactgtg gccaaggtca acatgcctct tttccgccgc ctccttaccg
     6001 gcctcgacgc cgggttcacc aagctctacg gatcggcgcg gaacccgctc catcagaccg
     6061 ggaccgtggc cgtcgccatg ctgctcgttc tgctcggcac cgggctctac ctggtcttct
     6121 tctatcgcct gggttccccc gccgcctcgg tggcacgtct tgccgccgac ccatggctcg
     6181 gcagctggat gcggaccctc caccggtatg cctcggacct gttcgtgatc gcggcggcac
     6241 tccacgccgt ccggatgctg gtccagggcc ggagttgggg accccggacg ctggcgtgga
     6301 tgtccggcct gttcctcttc ggcgccggtc tggtctgcgc ctggaccgga ttcgtcatgg
     6361 cgtgggacag cttcggcgag cggctcgcgc tcgagggagg ccggctcctc gacgtcctgc
     6421 cgatcttctc cgagccgctc agccggatct tcgcgggcga cggtccggtg ccgagcgcat
     6481 ttttcttcgt caacctcttc gtacacatcg cactcccgct cctcatgggt gctgggcttt
     6541 ggctccacgt ctcccgtctg gcgcggccag tgttgctgcc gcccaggcgc ttgatgtggg
     6601 gaatcattgg cgggctgacg attgcctccg tcctgctccc ggcctcgctc ggtccggcag
     6661 cggatccgtt gcgcctcgcc ccatcgactc ccaccgattt cgtggtggca tggtggctcc
     6721 ccctggtgga ggggttacca ccgtcggccg cctggagcgt tattctcgca ccgatcctgc
     6781 ttcctctcat ggtgccctgg cttacccgcc gccgccgaga ggcaggctgg gcacccagtg
     6841 ccgtcgacac ccggctttgc accgggtgca accagtgtcc ccaagattgt ccctgggaag
     6901 caatcaccat ggtgccgcga gacgatgacc gcactacctt cgtcgcgcgg gtgaacccgt
     6961 cgcgctgcgt gagttgcggc atctgcgccg gatcatgtgc tccgatgggc gtgggccctc
     7021 ccggccgaag cggccgggat caactggcaa tgctgcggga catcaccctc cctgcccttg
     7081 ctgcagctgg tacggttccc accgtcgcag tctgctgcgc ccaggcaccg gcagcacacc
     7141 attcggcgtt gcgggtcctc ggggcccatg ttcacctggt accgtgcgtc ggcaacctgc
     7201 attcctcggt cgtcgagctc ttcatccggt ctggggcgcc gggcgtcgtc gtgtgcgggt
     7261 gcccgccccg cgattgcctt ggccgcgagg gacccaagtg gctccacgag cggctcttca
     7321 atgaccggga ggcggagctg cagccccggg tggaccgccg acgggtgcgc accgcgaccc
     7381 tcgcgccggg agatctggcc ggaacagtgg ccgcgtttga gcagttcacc cgcgagctcg
     7441 ctgcgctcgc gccgccccaa cccgaatggg acactgacat caacgacctg tgcgacccgg
     7501 ttcccctgga ggaggccacc aagtgaaccc ggtccggatc cttaccgcag gcgctgccac
     7561 cgccgcggcg ctgtcactcc tggcgtacgc atccgctgtg ccgctggcgt atcacccgca
     7621 ggatgcggcc cggctgcgcc tgtcctggag cgcccgtccc gagcgcatcg aggtgtgccg
     7681 tcagctttcc accgaggctc aggcccggcg aggagagcac atgcgccagc gggtggaatg
     7741 tgtgggaggg ttcgcgacct atgccttgcg ggtggaggtg gatgaccgtg ccgttgatga
     7801 gtcggtgatc cacggggcgg ggctacggca tgatcgcccc ctctacctgc taagggatta
     7861 ttccgtccca cccggccagc atcggatccg ggtgacgctg acgcgccagg agaaagtcga
     7921 taccaatccg gcggccccgg ctgaggcggc ggctctcgaa gccgacaccg gtctctatgc
     7981 cgggcggtcc cagcgggagg ccacggagcg ggcgcggagg gagcgcgcgg ccatcccgcc
     8041 cagcctggtg atggacacca cgttcgagtt cagacctcga cgcgtggcgc tcgtcacgtt
     8101 caatgccggg ctgagaatcc tcgagctgcg cgcggaggcg ctccagcgat gattctcgaa
     8161 accgtcctcc gttatggaag gggaacctcg agcccaacgc cgagccgccc ctgaggcaag
     8221 aaacgcacag caaactcggg caccagctgg ttggcgcgac gggcggccgg cgccgcgtcg
     8281 acaatcgagt agatcgcccc gccgaggtac agcagggccc cgaacccgat catggggcca
     8341 tcgcacgcct cggagccacc acaggaaagc tgactgatca gcaaggaagc accgagaccg
     8401 ccaaccgcca gaatgccgag gcccttaccg acctcccccg cgtagaggtg cccaccgccg
     8461 ggcaccagga cgccgaacag ggtcccgaca ttggggtctt tgtagcccgg atcacccggc
     8521 tggcggaacg gcggaggagg ggcggccaga gtggcttgga ttgaagcggg tgcgtggtcc
     8581 ggcagcgccg gcgcggcgat gctggtcgcc ggcccttctt ccgggaggat agccgaaacc
     8641 ggcccggtgg caggcgtggg ctgggcgttc cgttcgctca gctcgaggag catcccacgg
     8701 gtgagcccca cgggaacatc ccagtagtac ttcaaggcac cgactccaac cccctggtac
     8761 gatcggaccc ggtagctgcc agccgaggct tccgccctcc ctaccccctg ggcgtttgtg
     8821 atgatgggca cggagtcgcg ggcccaaacc agccagaacc gtccgatcac aggcaagcgg
     8881 cgcccgccct cggccggtat cgaggcgcga atctcgacga tgacctttgg ctgagccgca
     8941 gccggggtag atccaacaca gaccacgaac caggccgtga gccatcgatg catgtttgag
     9001 atccttggag tccgaatgac tataccctgc agatcaattg taacaagcgc caggggccag
     9061 agtggggatc gcgcgctcaa ggccacgggg ggacgcgcgc ccaactagcc gtccaacact
     9121 cccgacaagt ggtcggccag gcgcagcgac agcgccacca ccgtcagcat gggattggcc
     9181 catcccgccc tcgggaacac cgaccccccg gtgacaaaca ggttctccag tccatgtact
     9241 ctcagatccg gatccaccac gccgccgccg ggatcctcat gcatgcgggt ggtcccggcg
     9301 tgatggtgcg cgttgagatc cggcggcgtc ccagcctcga actcgagccg ccccaacccg
     9361 gctgcttgaa accacccttg cagtgagtga cgcagtcggt ccagctcctg ttgctctgcg
     9421 gcgctccagg tcaagtgcag acacgggcgc gggatcccga agcaatccac cgcctggtcc
     9481 agaacgatcc ggttctcccg aaccggacgt tgttcgagat tgagcactac tcgacagctc
     9541 cggctccggg atccggtgac atcggaccat ccgtagccgt tgggaggctg ccagccctca
     9601 ccggaccgaa acactcgaga ccagggcgag acccggggcg ggtcgagcac cggcagcaac
     9661 gtcaccgcca cgcccggcag gccagcctct cgcgagctct ccggttcgac gccgagccgg
     9721 cccgcgatca cagtgccgtc ctgggctaag tgccggtcat agaaccgaag ccgggcgtgg
     9781 ctatccgatc ccgggaagaa caa
//
LOCUS       DASWKS010000128         2480 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2285135, whole genome shotgun sequence.
ACCESSION   DASWKS010000128 DASWKS010000000
VERSION     DASWKS010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285135"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..551
                     /locus_tag="VGA78_03935"
     CDS             219..551
                     /locus_tag="VGA78_03935"
                     /inference="COORDINATES: protein motif:HMM:NF015758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEX9893045.1"
                     /translation="MPLAQYQARVHSWVSQFEEGYFHPLTNLARLTEEVGELAREVNH
                     RFGQKTKKKDEPEGDLGMEMADIIFVLICMANREAIDLDASFERMMAKVEHRDSTRWT
                     RRTDRPND"
     gene            635..1942
                     /locus_tag="VGA78_03940"
     CDS             635..1942
                     /locus_tag="VGA78_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893046.1"
                     /translation="MDLRKRLSPLLTIGLVLSGCGPREANTAGPLPERMSRLAEAGDT
                     VALADLALAQCRRLDGVDRQSCYEDYFVALSDSGRVTLALGALDALADRDGRVKADGH
                     VYTHVIGIKAWTPGRDVATVFASCNGLFQSGCYHGVIQAYLTSDGGVDSTEVAGLCDQ
                     VEGSNQNRWLRFQCVHGIGHGLEMIWNWDLLRALQGCDWLTTGWDRQSCYGGAFMENA
                     VASMPNGHHASARVLADQGGEADHSGHSEHLDPAAITFKMRDSADALYPCSIVAARYW
                     SACYMLQGGMILQRQGYDFDRAGAECDKAPNGVRQFCYLSMGTMASGMTVQNTRQTIR
                     LCVSGHPDYRPWCFIGAVKNFIDVTADPNDGIAFCRAVPPGKDKRQCYVAVGEQIAVL
                     HGDAPNREKACARTPREGREECRYGAGLLATPPPGLPILPGGS"
     gene            2046..>2480
                     /locus_tag="VGA78_03945"
     CDS             2046..>2480
                     /locus_tag="VGA78_03945"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX9893047.1"
                     /translation="MRLALGFTSAILAVLAGPLTAQDQPATISGVVRDAQGQPIAGAE
                     IFAGRAEQPATSNPQGQFRIAQAPSGALWVMARKIGYAPVRRSVRVAKGENQVVDFTM
                     EPLPVTLPEVKVVERSGFKSRRLEDFWRRSRGSYAGRFITRED"
BASE COUNT          441 a          793 c          853 g          393 t
ORIGIN      
        1 gccgtcgcct cgcttcgcca ggtactgcag gcggaaacca gccggcgtaa gaccagccga
       61 accggcctgg tgtggatcac cctggaacct cagagccccg cgcggaagcg ggtaacggtg
      121 aattacctgg ccaactgaag caaggccgtt ccttcgagta gcggggccgc ggcgcgtcgg
      181 ctacccttcg cacccaactc ccctcctgcc cagagaccat gccgctcgcc cagtatcaag
      241 cccgggtcca ttcctgggtt tcccagttcg aggaagggta tttccatccc ctgaccaatc
      301 tggcccgtct gaccgaggag gtcggcgagc tggcccgtga ggtcaatcat cgcttcggcc
      361 agaagaccaa gaagaaggac gagcccgaag gagatctggg aatggagatg gcggacatca
      421 tcttcgtgct catctgcatg gccaaccgcg aggccatcga tctcgatgcc tcgttcgagc
      481 gcatgatggc gaaggtcgaa caccgggaca gcacccggtg gaccagacgg accgaccgac
      541 cgaatgactg accgactgac cgacgggcgg gcgggcggac tgacggactg acggacgggc
      601 gggcggacgg gcggacgggc actaaattac ctgcatggac ttgcggaaac ggctctcgcc
      661 actgctcaca atcgggctgg ttctttccgg gtgcggaccc cgggaggcca atacggccgg
      721 gccgttgccg gaacggatga gccggttggc cgaggcgggg gacacggtgg ccctggccga
      781 cctggcgctg gcccagtgcc gccgtctgga cggggtagac cgccagagct gctatgagga
      841 ttatttcgtg gccctgtccg acagcgggcg ggtgacgctc gcgctgggcg cgctggacgc
      901 cctggcggac agggacggca gggtcaaggc cgacgggcac gtctataccc acgtcatcgg
      961 catcaaggcc tggaccccgg gacgcgatgt cgcgacggtc ttcgccagct gcaacgggct
     1021 gtttcaatcg ggctgctacc acggggtaat ccaggcgtac ctcaccagcg acggcggggt
     1081 ggattccact gaagtcgcgg gtctctgcga ccaggtggaa ggctccaacc agaaccgctg
     1141 gctccgcttc cagtgcgtgc acggcatcgg gcacggcctg gagatgatct ggaactggga
     1201 tctgctgcgg gccctccagg gctgcgactg gctcacgacc ggctgggatc ggcagagctg
     1261 ctacggcggc gccttcatgg agaacgcggt agcctcgatg ccgaacgggc accacgcctc
     1321 ggcccgggtg ctggcggacc agggcgggga agcggaccat tccgggcact cggagcacct
     1381 cgatcccgcc gccatcacct tcaagatgcg ggactcggcc gatgcactct acccttgcag
     1441 catcgtggcc gcgcgctact ggagcgcctg ctacatgctg cagggcggga tgatcctgca
     1501 gcggcagggc tacgatttcg accgcgccgg cgccgagtgt gacaaggcgc ctaacggagt
     1561 ccgccagttc tgctatctca gcatggggac catggcgagc ggcatgacgg tgcagaatac
     1621 ccgccagacg atccggctct gcgtcagcgg gcatccggat taccggccgt ggtgcttcat
     1681 cggcgcggtc aagaacttca tcgatgtgac cgccgacccg aacgacggga tcgcgttctg
     1741 ccgcgcggtt ccccccggca aggacaaacg gcaatgttac gtcgcggtgg gagagcagat
     1801 cgcggtgctg catggggatg ctcccaaccg cgagaaggcc tgcgcccgca ccccgcgtga
     1861 aggacgcgag gagtgtcgct acggcgccgg cttgctggcg acccctccgc cggggttacc
     1921 cattctgccc ggggggtcgt gagactgcat aggaattgcg ctattgaagt gcaggaggcg
     1981 atgcagggtg ccctgacggc ccaaatgtcc gccgcatgtg acaccccgtc tctggaggag
     2041 gaccaatgcg gttagcgctc ggcttcacaa gcgccattct ggcggtgctg gcgggacccc
     2101 tgacggcgca ggatcaaccg gccaccatca gcggcgtggt acgggacgct cagggccagc
     2161 ccatcgctgg cgcggaaatc ttcgcggggc gcgccgaaca acccgccact tccaatccgc
     2221 agggacaatt ccggattgct caggctccat cgggcgccct gtgggtcatg gcccggaaga
     2281 tcggctacgc cccggtgcgg cgttcggttc gagtcgccaa gggcgagaac caggtggtgg
     2341 acttcaccat ggaaccgctg ccggtgacct tgcccgaggt caaggtggtc gaacggagcg
     2401 gcttcaagtc gcgccggctg gaagacttct ggcgccggtc gcgaggttct tacgccggac
     2461 ggttcatcac ccgcgaggat
//
LOCUS       DASWKS010000129        10454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_426944, whole genome shotgun sequence.
ACCESSION   DASWKS010000129 DASWKS010000000
VERSION     DASWKS010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426944"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..700
                     /gene="mltG"
                     /locus_tag="VGA78_03950"
     CDS             <1..700
                     /gene="mltG"
                     /locus_tag="VGA78_03950"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX9893048.1"
                     /translation="PEGRTILDIADYSATALGIPRDSVLAAMKDSVLLREHGISAPSA
                     EGYLAPDTYLVPAHSTARELVLLMLDQFRAGWDPAWDGRLAERRMSRHEAITLASIVE
                     GEARVDGERPIIAGVYLNRLRIGMALQADPTVQYAIQLSTGLRKQRLVYADYRIKSPY
                     NTYLVRGLPPGPVGAPSRGSILAVVQPAQVPFLYFVAGPDGRHVFSRNYTEHLRAVAN
                     SRRQSKPVEGGRSP"
     gene            773..1471
                     /locus_tag="VGA78_03955"
     CDS             773..1471
                     /locus_tag="VGA78_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011553803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEX9893049.1"
                     /translation="MLDKVYPDAKTALQDVSDGMTLFCGGFGLSGVPEELIFALRDLG
                     PRNLTFISNNAGTTEHGLVHLLKNGQVRKMISSYVGENAVFEAQMLSHKLEVELNPQG
                     TLAERIRAGGAGIPAFFTPTGVGTVVAEGKEVREFDGRSYVMERGLTGDFALIHAWKG
                     DRHGNLVYRKTARNFNPMMAMAGRITVAQVEHLVEPGGLDGDLIHTPGIFVQRVVVCR
                     QTGKHVERRTVRKR"
     gene            1468..2109
                     /locus_tag="VGA78_03960"
     CDS             1468..2109
                     /locus_tag="VGA78_03960"
                     /inference="COORDINATES: protein motif:HMM:TIGR02428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX9893050.1"
                     /translation="MTDLRERIVRRAARELLSLTPETGYYVNLGIGMPTMVANHVPEG
                     VPVILQSENGMLGVGPYPLEGQEDPDLINAGKETVTELPGTSYFSSADSFAMIRGGHI
                     ALSILGALQVSAEGDLANWMVPGRMVKGMGGAMDLVAGARRVVVIMEHRTREGEPKIL
                     NRCSLPLTGSRCVHRIITELAVLDVTPAGLKLAELLNGTTRDEVQAATEPVLL"
     gene            complement(2116..2748)
                     /gene="thiE"
                     /locus_tag="VGA78_03965"
     CDS             complement(2116..2748)
                     /gene="thiE"
                     /locus_tag="VGA78_03965"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX9893051.1"
                     /translation="MYPNVVAAIRLMLVTDDALLAGRDLVDVCRAAVRGGVTSVELRL
                     KRLPAAELAEAARSLIAALEIPVVINDRADVALAVGAAGVHLGPEDIPVQLVRRIAPV
                     GFLIGASVGVAGETANGLGADYWGVGPWRDTSTKSDAGVALGPDGFRRFVRLAEGKPC
                     IAIGGVRPADVATVREAGGAGVAVVSGILAAPDAEAAARQYALQFPLSGD"
     gene            2747..3919
                     /locus_tag="VGA78_03970"
     CDS             2747..3919
                     /locus_tag="VGA78_03970"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEX9893052.1"
                     /translation="MSEQNIPSAIRVTRRGAARWASGHPWIYRSDTLDALPQPGVVPV
                     LDPRGKFLGQALYSPASEISLRLLEQSSRAVDAGWWRERIAAALARRAGIDATAYRVV
                     HAEGDGLPSLIVDRYDRWVVVQLLSAGLETLRAWVLDAIQHALAPEGILLRHDAPVRR
                     HERLPEEVVVAAGTVPELILIREGLVRYQAAPWTGQKTGAFLDQRPNRIRAAQLTRPG
                     GRALDCFAYHGSFALHLATRATSVLALDVSEAAISRGRNNAELNGQANIEWQVGDAFE
                     VLRQLDRARDRFDTVVVDPPAFAKSRETVPAALRGYHELNRRAMRLLAPGGFLITASC
                     SFHVRRPDFEEMLASAASDSGRRMVLVEWLAQGEDHPEVLTVPETGYLKGAVLRAE"
     gene            4039..4860
                     /locus_tag="VGA78_03975"
     CDS             4039..4860
                     /locus_tag="VGA78_03975"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9893053.1"
                     /translation="MLSLQQLTEQRRPARPLPSLKQQYQEYLLQRIEGFKNSLARDEL
                     LTLGDEAARELHTGTAGQFLLTEILMLETVDRLIQKRLRLPSYNKWRKQYRALREAQR
                     QPIHWGLDPAGAVAFLLPRIEAMDNVLVVGGGAQAEACLLAAHQAEVTFVDADLGVVE
                     QMETRIAGESLAGQFMAYVASLGEWLPPFTRELDLGIVDASTLSGLTHANRAALLLEL
                     KNLTRPGGVNVIVPGEGRAAPEGYLAHYPDWDREKLTPARRGKAAKTRGVIMVRP"
     gene            5157..5354
                     /locus_tag="VGA78_03980"
     CDS             5157..5354
                     /locus_tag="VGA78_03980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893054.1"
                     /translation="MRAALQAEKRLARGIVIQHGSFVPERAAFWAYMWTEDEETDVVH
                     WHERVPVETGAVRRRADERAA"
     gene            5860..8808
                     /gene="fdhF"
                     /locus_tag="VGA78_03985"
     CDS             5860..8808
                     /gene="fdhF"
                     /locus_tag="VGA78_03985"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEX9893055.1"
                     /translation="MPRLTLNGRTVEFEAGATILDVARASGVGIPTLCWYPKLSIVGS
                     CRICLVSVEGQSKLLAACGTKATDGMIVETESDDAVSNRRSVLQMLLERYPAEHLGNG
                     GRAQPRNEFERYVVDYDVPIGKRAELGLRTGDERPGDVMIQHDMSLCILCTRCVRACD
                     EIQQVGVLDVGDRGEHAEIIVGGDGDPDHAGCTWCGECVRVCPTNAIFEVIPRLRFGA
                     AAVATTDRPVRSVCPYCGVGCQIDLHTKNDRLVRVTSPWIEERTPNQGSTCVKGRFGY
                     DFAQHRDRLMKPLIRRGWIRRSDGRWDWTGEKPRHREGTWPTVAENAKGPKPRPPVRQ
                     VGKPPLTGLALGGDERDIRDQVATPAEWYQPFREATWEEALSLTAQELLRLRETYGPS
                     SLAGFSSAKCSNEENYLFMRMVRGAFQTNNVDHCTRLCHSTSVAAMNRALSTAAASGS
                     MREIEEACDVIFIAGANTTESHPVFGALIKRAHARGARLVVADVRRTELASLADLHLQ
                     MLPGTDVALYNAMLHHILANGLENREFVAGRTHDFEKIRQAVEPYTLVLGEKITGIPR
                     DLIARAAEWYAKGPRTSTLWAMGLTQHATGTDIVTSLLNLLLCCGMIGRWGAAMIPIR
                     GQNNVQGASDMGAIPFAYTDYRPVTDPANRAEYAAVWGVPAESLSIENGLMVTEIAKA
                     GSPVRGMYIMGENPVLSDPNVAHAEEWFRRLEFLAVHDLFLTETARWADVVLPGSSFA
                     EKEGTYANTDRHIQLANIALPPPGDARADLDILIDLSNRLGLPARFGSAGEVMDEIAR
                     VTPTWRGVSYQKLRREGALQYPVPTPDSPGTPFLFAERFPTADGKARLVPVEYLPPNE
                     LPDAEFPFVLNSGRQMYHWHTGTMTRRSTGLDSREPVPVVEMNAADAALLGVSDGDTV
                     RVTSRRGSLTIGVRVSERQAPGQVFIPMHYREAAVNLLTNPTLDPYAKIAEFKISAVR
                     IEPVRTGVGV"
     gene            8805..9548
                     /locus_tag="VGA78_03990"
     CDS             8805..9548
                     /locus_tag="VGA78_03990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9893056.1"
                     /translation="MTPLPEDDRPWLIRVVKPWIPAGLRQAFRATYRRSKLDRACRSI
                     RRLKHHEVPNRSQLNRLRESWDNGGWPASTTCLGVIATQVRRTTGPILECGSGVSTVM
                     LGLMTQGSGRPVWSLENDPRWADIVESELSRWSCGHVRVVRAPLVDRGEFAWYAAAPE
                     ELPESITLLVIDGPPAFTKGGRRGALHEVGRRLAPGAVVILDDAQREGEMEAWRDWTE
                     HCGLRIDPDSGFPFDPTRMESGVAVGRIA"
     gene            9616..>10454
                     /locus_tag="VGA78_03995"
     CDS             9616..>10454
                     /locus_tag="VGA78_03995"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX9893057.1"
                     /translation="MRALVKPAPGPGMVVRDVPMPVIGSQDVLIRVLYAGVCGTDLHI
                     WEWDAWAAGRLKPPLTIGHEFAGRIEKLGPEAVAEGLLKAGDLVTAEGHIICGHCLPC
                     RTGNGHLCVRTRIIGVDRDGAFADYIAMPASNVMPLDGIAPEIGAIMDPVGNAVHTVL
                     EGGDVPGSTVFILGCGPIGCFAVGVARAAGASLVVASDLNPRRLELARAMGAHVTLNP
                     STDDVVGRIKELTGGLGIDLVCEMSGHPAGHAQAFAAARPGGRVNLLGTPSRPTEVDF
                     ARDV"
BASE COUNT         1774 a         3553 c         3474 g         1653 t
ORIGIN      
        1 gccggagggg cggaccatcc tcgacatcgc cgactacagc gccacggcgc tcgggatccc
       61 gcgggattcg gtgctggccg cgatgaagga ctcggtgctg ctccgggagc acggcatttc
      121 cgccccgtcg gccgaagggt acctcgcccc cgatacctac ctggtgccgg cccattcgac
      181 cgcgcgagag ctggtgctcc tcatgctgga tcagtttcgg gcggggtggg acccggcctg
      241 ggacgggcgg ctggcggagc gccgtatgag ccggcacgaa gcgatcaccc tcgcctcgat
      301 cgtggagggc gaggcccggg tcgacgggga acgccccatc atcgcggggg tgtatctcaa
      361 ccggctccgg atcggaatgg cgctccaggc cgacccgacc gtgcaatacg ccatccagct
      421 gagcaccggc ctccggaagc aacgcctggt ctacgccgac taccgaatca aatcgcccta
      481 caacacctac ctggtgcgtg gccttccgcc ggggccggtt ggagcaccca gccggggcag
      541 catactcgcg gtagtgcagc cggcccaggt cccatttctc tatttcgtgg ccgggcccga
      601 cggacggcac gtcttctcgc gcaattacac ggagcacttg agggccgtgg ctaacagtcg
      661 aagacagtcg aagccggtcg aaggcggtcg aagcccgtaa cggcgtcagc ctcgaccccc
      721 ttcgactatc ttcgaccgtc ttcgaccgcc ttcgaccgcc ttcgaccaaa acatgctcga
      781 caaggtctac cccgacgcca agaccgcgct ccaggacgtt agcgacggca tgaccctctt
      841 ctgcggcggg ttcggactct ccggcgtccc cgaggagctg atcttcgccc tgcgtgacct
      901 ggggccgcgc aacctcacgt tcatcagcaa taacgccggc accaccgaac acggtctggt
      961 gcacctgctc aagaacggcc aggtccgaaa gatgatctcg agctacgtgg gcgagaacgc
     1021 ggtgttcgag gcgcagatgc tgtcccacaa gctggaagtg gagctgaatc cgcaggggac
     1081 cctggcggag cgcattcggg ccggcggcgc cggcatcccc gcgttcttca cgccgaccgg
     1141 ggtgggcaca gtggtggccg aaggcaagga ggtgcgggag ttcgacggcc gctcctacgt
     1201 catggagcgg ggattgaccg gggacttcgc gctgattcac gcctggaagg gcgaccgcca
     1261 cggcaacctg gtgtaccgca agaccgcccg aaacttcaac cccatgatgg ccatggccgg
     1321 aaggattacg gtggcccagg tggagcatct ggtcgagccg ggcgggctgg acggtgacct
     1381 gatccacacc cccgggatct tcgtacaacg ggtggtcgtc tgccgccaga ccggcaagca
     1441 cgtcgaacgc cgcaccgtga ggaaacggtg accgacctgc gcgagcggat cgttcggcgg
     1501 gccgcccggg agttgctgtc cctcacgccc gagaccgggt actacgtcaa cctgggaatc
     1561 gggatgccca ccatggtggc caaccacgtt cccgagggcg tgcccgtgat cctgcaatcg
     1621 gagaacggca tgctgggggt gggcccctac ccgctggaag gccaggagga ccccgatctg
     1681 atcaatgccg ggaaggaaac cgtgactgag ctgccgggca cctcgtattt ctccagcgcc
     1741 gactcgttcg ccatgatccg gggcggacac atcgcgttga gcatcctggg cgcgctgcag
     1801 gtgtccgccg aaggcgatct ggccaactgg atggtgccgg gacgaatggt caagggaatg
     1861 ggcggcgcca tggatctggt cgccggcgcc cggcgggtgg tggtgatcat ggaacaccgg
     1921 acccgggaag gggaacccaa gatcctgaat cggtgcagcc tgccgctcac cggctcccgc
     1981 tgcgtgcacc gcatcatcac cgagctggct gtcctggacg tgaccccggc cggactcaag
     2041 ctggccgagc tgctgaacgg caccacgcgg gatgaggtcc aggcggcgac cgagccggta
     2101 ctgctgtgag tcgccctagt cgccgctgag tggaaactgc agggcgtatt gtcgagccgc
     2161 cgcctcggca tccggagcgg ccagaatccc ggacaccacc gccactcctg ctcctcccgc
     2221 ctcccgcacc gtcgcgacat ccgccggcct gaccccaccg atcgcgatgc agggcttccc
     2281 ttccgccagc ctcacgaagc ggcgaaagcc atcgggcccg agcgcgaccc cggcatcgct
     2341 cttggtcgag gtgtcgcgcc aggggcccac cccccaatag tccgccccca gcccgttcgc
     2401 cgtttctccg gccactccca ccgacgcacc gatcagaaaa cccaccgggg cgatgcgccg
     2461 gaccagctgc accgggatgt cctccggacc gagatgcacc ccagccgctc ccaccgcgag
     2521 cgccacgtcg gcgcgatcat tgatgacgac cggaatctcc agcgcggcga tcagcgaccg
     2581 ggctgcctcg gccagctcgg ccgccgggag acgcttcaac cgcagctcca ccgaggtcac
     2641 gccaccccgc acggccgcgc gacaaacgtc caccagatca cgaccggcga gcaaagcatc
     2701 gtcggtcacc agcatgagcc ggatcgcggc cactacattg gggtacatga gcgagcagaa
     2761 tataccgtcg gcgatccggg tcacccggcg gggcgcggca cgctgggctt cgggccatcc
     2821 ctggatctac cggtccgaca ccctggacgc gctgccccaa cccggtgtag tgccggtcct
     2881 tgacccgcgc gggaagttcc tggggcaagc gctgtattcg cccgcctcgg agatttccct
     2941 gcgcctgctg gagcagagct cgcgggcggt cgacgcaggg tggtggcgag agaggatcgc
     3001 ggcggcgctg gctcggcggg ccggcatcga tgcgaccgcg taccgggtgg tgcatgccga
     3061 gggagacggc ctgccctcgt tgatcgtgga tcgctacgat cgctgggtgg tggtacaact
     3121 gctctccgcc gggctggaga cactccgggc ctgggtactc gacgccatcc agcacgcgct
     3181 ggctcccgaa gggatcctgc tccgccacga cgccccggtc cgccgccacg aacgtctgcc
     3241 cgaagaagtg gtcgtggccg cgggcacggt ccccgagctg attctgatcc gcgaagggct
     3301 ggtccgatac caggcggcac cctggaccgg acagaagacc ggagccttcc tggatcagcg
     3361 acccaaccgc atccgggcag cgcagctgac ccgcccgggc gggcgggcgc tcgactgttt
     3421 cgcctatcac gggtcgttcg cgctccacct ggctacccgg gccacctcgg tgctggcgct
     3481 ggatgtgagc gaagcggcga tcagccgcgg acggaacaac gcggagctca acggtcaggc
     3541 caatatcgaa tggcaggttg gggacgcctt cgaggtcctg cgccagctcg accgggcccg
     3601 cgatcggttc gataccgtcg tagtcgatcc tccggccttc gccaagtcgc gcgagaccgt
     3661 acccgcggca ctgcggggat accacgagct caaccgccgc gccatgcggc tgctcgcacc
     3721 gggcgggttt ctcatcaccg cctcgtgctc atttcacgtg cgacggcccg acttcgagga
     3781 gatgctggcg agcgcggcgt ccgacagcgg ccgacggatg gtgctggtgg aatggctggc
     3841 gcaaggggag gatcatcccg aggtgctgac tgtccccgag accgggtact tgaagggggc
     3901 ggtgttgaga gcggaatgag tcagaatgca ctctgcatgc ggtttccgcc tttcgcaata
     3961 ccatgtcatt tcctaattta gaactgtgac ggtcctcacc gccccagcct ctgtcaaacg
     4021 attcgaccgg agtgggcttt gctgagtctg caacagctga ctgagcaacg ccgcccggcc
     4081 cgaccgctgc cttccctcaa gcagcagtat caggagtatc tcctccaacg catcgaaggg
     4141 ttcaagaatt cgctggcccg cgacgagctg ctgacgctgg gcgatgaagc ggcccgtgag
     4201 ctgcacaccg ggaccgcggg ccagttcctt ctgaccgaga tcctcatgct ggagacggtc
     4261 gaccggctga tccagaagcg gctccggctt ccctcctaca acaagtggcg taagcagtat
     4321 cgggccctgc gggaggcgca gcggcagccg attcactggg gactcgaccc cgccggcgcg
     4381 gtggcttttc tgctgcctcg catcgaagcc atggacaacg tgctggtcgt tggcggcggc
     4441 gcccaggccg aggcgtgcct gctggcggcg caccaggccg aggtcacgtt cgtggacgcg
     4501 gacctggggg tggtggagca gatggagacc cgcatcgccg gggagtcgct ggcgggtcag
     4561 ttcatggcgt acgtggcatc tctgggcgag tggctgcccc ccttcacccg cgaactggac
     4621 ctggggatcg tggatgcctc gacgctgtcc ggcctcaccc acgccaaccg cgccgccctc
     4681 ctgctggagc tcaagaacct cacccgaccc ggcggagtga acgtgatcgt cccgggtgag
     4741 ggccgggccg ccccggaagg ctacctggcg cactacccag actgggaccg ggaaaagctc
     4801 acccccgctc ggcgcgggaa ggcggcgaag acccgtgggg tcatcatggt ccgaccgtga
     4861 actgcggtcg aaggcggtcg aagcagtcga aagtggtcga agcagtcgaa gcgggtcgaa
     4921 ggggtcgggc caggccggtc cttccattcg actcccctcg actcccctcg actgccttcg
     4981 actgcttcga ccgcttcgac cgcttcgacc gccttcgacc cccttcgacc gccttcgacc
     5041 gccttcgacc gcagttgtgt ggcatccggc ccgcgccatt cgtcgtatag aagccggggc
     5101 ccacgacgtg ccgtctagga gtaccccgcg acattctacc gcaattggag atggagatgc
     5161 gagcggctct gcaggcggag aagcggctgg cccggggtat cgtcattcag cacggatcgt
     5221 tcgtgccgga gcgggcggcc ttctgggcgt acatgtggac cgaagacgaa gaaaccgacg
     5281 tcgtgcattg gcacgagcgg gtaccggtgg agaccggagc ggtgcgccgg cgagccgacg
     5341 aacgggcagc gtgatcctcc cgggccgagt cacctcggcc cttttttttc gtgaccgaca
     5401 tcacattggg gtcgaaggag tcgaaggagt cgaaggagtc gaagcagtcg aagaccgcct
     5461 tcgaccgctt ttctgtcatg tagggtattg cgcgattgcg cgatatttca aacattgtag
     5521 tgcagcagat cgcgtgaata cttcaagtta cgccttctgc acccggcgat cacacggatc
     5581 gtcggtcagt ccaacccaac aggaggtctg tgtatggcga agcgcaaagc gaagaaggcc
     5641 ggcaagaaga aagcggccaa gaagaagtaa gtaggctgca gggaccggcg cgaccgaaga
     5701 gaaggcgcgc tggaatgcaa gaagggccgg cctgctgccg gccctgtgca tttccgccct
     5761 ccactcctca ccccgtcgaa gacagtcgaa gcggtccttc gaccgccttc gaccatgtag
     5821 tcacttgccg ctgctgccgg ctatgtctat cgtcgaagca tgccccgcct gacgctgaac
     5881 ggccgcacgg tcgaattcga ggctggcgct accatcctcg acgttgcccg ggcgagcggc
     5941 gtgggaatcc ccacgctgtg ctggtatccc aagctgtcga tcgtaggcag ctgtcgcatc
     6001 tgtctggtct cggtggaggg ccagtccaag ctcctcgcgg cgtgtggcac caaagcaaca
     6061 gatggcatga tcgtcgaaac cgaatcggac gacgcggtga gcaatcggcg cagcgtgctc
     6121 cagatgctgc tcgagcggta tccggccgag catctgggca acggcggacg ggcccagccc
     6181 cggaacgaat tcgaacgtta cgtggtggac tacgacgtcc cgatcgggaa gcgcgccgag
     6241 ctcggcctcc gcaccgggga cgagcggccc ggcgacgtca tgattcagca cgacatgtcg
     6301 ctctgcattc tctgcacccg gtgcgtccgg gcctgcgacg agatccagca ggtgggggtg
     6361 ctggacgtgg gcgatcgggg cgagcatgcc gagatcatcg tgggcgggga cggggacccc
     6421 gatcacgccg gctgcacctg gtgcggcgag tgcgttcggg tctgtcccac caacgccatt
     6481 ttcgaggtga ttccccggct ccgcttcggt gccgcggcgg tggcgacgac cgatcggccg
     6541 gtgcgttcag tgtgccccta ctgcggggtt ggctgccaga tcgatctgca caccaagaat
     6601 gaccgactgg tccgggtgac gtctccctgg atcgaagagc gtacccccaa ccagggatcc
     6661 acctgcgtca aaggtcgctt cggctacgat ttcgcccagc atcgtgaccg gctgatgaag
     6721 cccctgatcc ggcgcggctg gatccggcga tccgacggcc ggtgggactg gaccggagaa
     6781 aaaccgcggc accgcgaagg gacctggccc acagtggccg agaacgccaa gggacctaag
     6841 ccccgcccgc cggtgcgaca ggtcggcaaa ccaccgctca ccggcctggc cctgggcggc
     6901 gacgagcgtg atatccgcga ccaggtggcg acaccggcgg aatggtacca gccattccgg
     6961 gaagcgacct gggaggaggc gctctccctg accgcgcagg aactgctccg cttgcgcgag
     7021 acctacggcc ccagctcgtt ggcgggcttc tcctccgcca agtgcagcaa cgaggagaac
     7081 tatctgttca tgcggatggt gcggggggct ttccagacca acaacgtgga ccactgcacc
     7141 cggctctgcc actccacctc ggtggcggcg atgaaccggg ccctgtccac cgcggccgcg
     7201 tcggggtcga tgcgcgagat cgaggaggct tgcgacgtca tcttcatcgc cggggccaac
     7261 accaccgaat cgcacccggt attcggggcc ctgatcaagc gagcccacgc ccggggggcc
     7321 cgactggtcg tggctgacgt gcggcggacc gagctggcgt cattggctga cctgcacctg
     7381 cagatgctcc ccggcaccga cgtagcgctc tacaacgcca tgctgcacca catcctggcc
     7441 aacgggttgg agaaccggga gttcgtcgcc ggccggaccc acgacttcga gaagatccgc
     7501 caggcggtcg agccctacac cctggtgctg ggcgagaaga tcacggggat cccgcgcgac
     7561 ctgatcgccc gggccgccga gtggtacgcc aagggtcccc gtacctcgac cctctgggcg
     7621 atgggactca cccagcacgc caccggtacc gatatcgtca ccagcctgct gaacctgctg
     7681 ctctgctgcg gcatgatcgg tcgctggggc gcggcgatga tcccgatccg agggcagaac
     7741 aacgtccagg gcgccagcga catgggcgcg atccccttcg catacaccga ttatcgtccc
     7801 gtcaccgatc ccgccaatcg ggccgagtac gccgccgtct ggggcgtgcc ggcggagtcc
     7861 ctgtcgatcg agaacgggct catggtcacg gaaatcgcca aggcgggcag cccggtccgc
     7921 ggcatgtata tcatgggcga aaacccggtg ctgtccgatc ccaacgtggc ccacgcggag
     7981 gaatggttcc gccgactcga gttcctggcg gtgcacgatc tcttcctcac cgaaaccgcc
     8041 cgctgggccg acgtggtcct tcccggttcc tcgttcgccg agaaggaggg cacctacgcc
     8101 aataccgacc gtcacattca gctggccaac atcgccctcc cgccgcccgg cgatgcccga
     8161 gccgatctgg acattctgat cgacctgtcc aaccggctgg ggttgccggc gagattcgga
     8221 agcgcgggcg aggtcatgga cgagatcgcc cgggtgacgc ccacctggcg gggggtttcc
     8281 tatcagaagc tgcggcggga aggggccctg cagtacccgg tgccgacacc cgactcgccc
     8341 ggcaccccct tcctcttcgc cgagcggttt cccaccgccg acggtaaagc ccggttggtg
     8401 ccggtcgagt atctcccgcc caacgagctg cccgacgctg agttcccctt cgtgctcaac
     8461 tcaggccgcc agatgtacca ttggcacacc ggaaccatga cccgccgctc caccggcctc
     8521 gattcgcgcg agccggtgcc cgtggtcgag atgaacgccg ctgacgccgc tctgctgggc
     8581 gtctcggacg gcgatacagt gcgggtaacc tcccgccgcg ggtcgctgac gatcggggtg
     8641 cgggtatcgg agcgccaggc gcccggccag gtcttcatcc cgatgcacta ccgcgaggcc
     8701 gcggtcaacc tgctcaccaa cccgaccctc gatccctacg ccaagatcgc cgagttcaag
     8761 atcagcgcgg tacgcatcga gccggtccgc accggagtgg gcgtgtgacg ccgctgcccg
     8821 aggacgatcg tccctggctg atccgggtgg tcaagccctg gattcctgcc gggctgcgcc
     8881 aggccttccg ggcgacctat cgtcggtcca aactcgaccg ggcctgccgg tcgatccgac
     8941 ggttgaagca tcatgaggtc cccaatcgaa gccagttgaa ccgcctgcga gaaagctggg
     9001 acaacggtgg ctggccggcc agcaccacct gtctcggggt catcgccacc caggtccggc
     9061 gaaccaccgg ccccatcctg gaatgcggca gcggggtgtc gaccgtgatg ctcggcctca
     9121 tgacccaggg gtcgggccgc ccggtctggt cgctggagaa cgacccgcgc tgggccgaca
     9181 tcgtcgagtc cgaactgtct cgctggagct gcggacacgt gcgggtggtg cgggcaccgc
     9241 tggtcgatcg cggcgagttc gcctggtacg ccgcggcacc ggaggagctc cccgagtcca
     9301 tcacgctgct ggtgatcgat ggcccgcccg ccttcaccaa gggaggccgc cgcggcgcgc
     9361 tccatgaagt gggccggcga ttggcgccgg gcgcggtcgt gatcctggac gacgcccagc
     9421 gtgagggaga gatggaagcc tggagagact ggaccgagca ctgcggtctc cggatcgacc
     9481 ccgacagtgg cttcccgttc gatcccaccc gcatggagtc aggcgtcgcg gttggacgca
     9541 tagcgtagcc ggaagccggc gccggatggc cgaccgctga ccgggcccat cgcccgcctc
     9601 tatattccgc cctcaatgcg cgcactcgtg aagcctgctc cgggccccgg catggtggtc
     9661 cgcgacgttc ccatgcccgt gatcggctcc caggatgtgc tgatccgggt tctctacgcc
     9721 ggcgtctgcg gcaccgatct gcacatctgg gaatgggatg cctgggcggc gggacggctc
     9781 aagccgcccc tcaccatcgg ccacgagttt gccggacgca tcgagaagct cgggcccgaa
     9841 gcggtagcgg aagggttgct gaaagcgggc gatctggtga ccgccgaagg ccacatcatc
     9901 tgcggccact gcctgccctg ccgcaccggg aacggccacc tctgcgtccg cacccggatc
     9961 atcggggtcg accgggatgg cgctttcgcc gactacatcg ccatgccggc cagcaacgtc
    10021 atgccgctcg acgggattgc ccccgagatc ggggccatca tggacccggt gggcaacgcg
    10081 gtccacaccg tgctcgaagg cggcgacgtg ccgggcagca ccgtcttcat cctgggatgc
    10141 ggcccgatcg gctgctttgc ggtcggtgtg gcgcgggcgg ctggagcttc gctggtagtc
    10201 gccagcgatc tcaatccgcg ccggttggaa ctggcgcgcg ccatgggggc ccacgtgacg
    10261 ctcaacccct ccaccgacga tgtggtaggc cggatcaagg agctgaccgg cggattggga
    10321 atcgacctgg tctgtgaaat gagcgggcat ccggccggac atgcccaggc cttcgcggcg
    10381 gcccggccgg gcgggcgcgt caacctgctg ggtaccccca gccgtcccac cgaagtggac
    10441 ttcgcccgcg acgt
//
LOCUS       DASWKS010000130        12180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1917166, whole genome shotgun sequence.
ACCESSION   DASWKS010000130 DASWKS010000000
VERSION     DASWKS010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12180
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1917166"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..262)
                     /locus_tag="VGA78_04000"
     CDS             complement(107..262)
                     /locus_tag="VGA78_04000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893058.1"
                     /translation="MRLCVLASVIVLLIAGCAQSAQLPVAPGIVVSAADTVTATVEGP
                     QFGSLDR"
     gene            complement(355..1023)
                     /locus_tag="VGA78_04005"
     CDS             complement(355..1023)
                     /locus_tag="VGA78_04005"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9893059.1"
                     /translation="MTIRVCAIEDDARYRDSLAALFTHAPGFTWGGAYARPADALEAA
                     AVSIARGETQPWDVVLMDLDLPGMHGVEVTRRLKAMLPNIQIVVLTVFEDVNSIVNAI
                     CAGADGYLLKRSSALELLHQLESIVAGGAPLTAGVARTILDVVRTAPPVPQGQRGEAP
                     SLTDREKDVLQGLVNGRSYKQVGDELGVSLDTVRSHIRSIYRKLQVHSVAEAVSRALR
                     ERLV"
     gene            complement(1091..3967)
                     /locus_tag="VGA78_04010"
     CDS             complement(1091..3967)
                     /locus_tag="VGA78_04010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HEX9893060.1"
                     /translation="MNVPGVAVVRLVCLLLACLLHPAAAAAQQRLIRIYDQQQGLAVP
                     FVTSLAQDAAGFLWIGTVAGLVRYDGSDMRSWGRAELTGAVRELQGKGRLVVVRDDRD
                     AVYSVRPNGLVPLLGPDGRPVIGVSAMTIDEDGTLWVLWPDRMARLSISGQWRRESAP
                     PLDPGDRLQLLRTGRGVLLVGSQRRVWRRRADGQFDRLFDIERPTDLLIRGPDDFVVV
                     GWVGESTLRLMQRYAGATDVLLELRSRRPFSVAERGGALWVSYDRGVAMLRPGEPPEI
                     IEAARGVTGGGPLLVDREGSVWLGSPHGLMQFPEPETVTWNESNGLPSTYAQFVIVER
                     GVVWVSTSSGLSGVPARPTPGRAFEAQAQISGRICRTSDGRLVATDTRGRWYQLQGES
                     WARVGWPDGAVASDCAASDGGPTWFATSRGLYRLSPGGAAPERVQTSDQRLNAVHTDS
                     AGRIWTGAGERVCRRATADGRRLKDEGWACTNLAGAGDILDFITVPGGLWAATRNGVW
                     VYHDAGWRPVQSSWELPSRFINGFAESPSGGVWVLSAGAVIRVVPEPLTPQRWRVLER
                     LSTWQGVQTEEGNGLVESTDGTVWLVSSVGLTRVPIAARRIRRDPPLVEISNVMVNGL
                     EVPVGEPHRLSVPDAVVELRFAVLTYRDRSRLQTQLQLTPESPWSPPSTGVPQFRLSQ
                     LAPGGYAAAVRASIDGERWSRPSAPVAFTVPAPWYRRPSLLLLGALLLAGTLLVAHRT
                     RTAVLLGLERQRTAIAMDLHDELGAGLGSIGILAGVASRPDVADGERRDFAQRIALTA
                     GELGGKLTDIVGALRSGRVTLGVLAADLAERAARLVPGPHPSLHMDYPQQWPEGELDP
                     AVRHDLRLIALEAVHNAVRHADARTITLGIQPAGRHWRMWVKDDGIGFDPNGDAAPRG
                     TGLGQRALKRRAERIRASLKVDSTPGRGTTVEILFEPHRPRMMM"
     gene            complement(3939..4460)
                     /locus_tag="VGA78_04015"
     CDS             complement(3939..4460)
                     /locus_tag="VGA78_04015"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEX9893061.1"
                     /translation="MALHVALIEPQIPPNTGNIARLCAATDSSLHLIGQLGFSLADRD
                     LRRAGLDYWEHVDLWHHPEWRAFRDAISRDRCLYFSANATRSYWDAAVQPNSCLVFGN
                     ETLGLPERILEKHPERCYRIPMNGPVRSLNLATAVGIVLYEGLRQIRTVDSPAEPEDR
                     RKEAHERSRSRRR"
     gene            complement(4465..5508)
                     /gene="moaA"
                     /locus_tag="VGA78_04020"
     CDS             complement(4465..5508)
                     /gene="moaA"
                     /locus_tag="VGA78_04020"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEX9893062.1"
                     /translation="MTPRVLDRLNRPLGSLRLSVTDRCNLRCRYCMPEEHYVWLPRDS
                     ILTFEELTRVARIFAALGVRKVRLTGGEPLLRHDLPALVAMLREVPALDDLALTTNGV
                     LLAALAQRLRDAGLDRVTVSLDTLRPERLAAFARSNRHADILAGIRAARSAGLGPVKL
                     NSVVMRGFNDDEITDLLEFARAENAELRFIEYMDVGGATQWSPAQVVSREAILAAISA
                     RYGPVSLLPRAGAGSSIAAPAERFALGDGTRFGIIASVTAPFCRDCDRSRITADGTWY
                     QCLYADRGTDLRDPLRWGASDGALESLIRGSWTERADRGAELRRATPERAPLYELQRL
                     RDDPRREMHTRGG"
     gene            complement(5505..5957)
                     /locus_tag="VGA78_04025"
     CDS             complement(5505..5957)
                     /locus_tag="VGA78_04025"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEX9893063.1"
                     /translation="MDYLTSDPIEPSLLVQWVEAPDRGAIATFLGTVRDHHAGRTVVE
                     LQYEAFGPMAEAECGRIVAEAESRWPCRIALRHRIGRLVIGDVVVAVAAASAHRDEAF
                     TACRYVIEELKRRVPIWKRERYADGTEAWVDPTAPGGTVPAAVAEPAR"
     gene            complement(5960..6217)
                     /locus_tag="VGA78_04030"
     CDS             complement(5960..6217)
                     /locus_tag="VGA78_04030"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEX9893064.1"
                     /translation="MTDTSMSIRVLLFARYAELLGRSELTLEVPFGATVEEAISRVRA
                     LPGGVALPARLLVARGCDQVGYDTRLAARDELALLPPMAGG"
     gene            complement(6322..6666)
                     /locus_tag="VGA78_04035"
     CDS             complement(6322..6666)
                     /locus_tag="VGA78_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX9893065.1"
                     /translation="MTKADLVEQVTAAIARTSGPLISKKDCARVVDLFLDAIKRALKE
                     QRNIEVRGFGTFKIRRRKTRMARNPRTGEPVEVAARPVPVFKPSKELRALVAEDTDEP
                     PGELGSTASAFD"
     gene            complement(6755..7855)
                     /gene="carA"
                     /locus_tag="VGA78_04040"
     CDS             complement(6755..7855)
                     /gene="carA"
                     /locus_tag="VGA78_04040"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012053752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEX9893066.1"
                     /translation="MTGHPAFVLLEDGAWFAGTTSLPVEPAFGEVVFTTSMTGYQETF
                     TDPSYLGQIVVMTAPMIGNYGINAEDLESATPQISGVVVRELSRHPSNWRATDSLGNW
                     LQANGVPVLEGVDTRRLTRHIRERGAMRGVIATGSEPSDLVHQQLLASPRMEGQDLAS
                     LAGVSVPYTEGDEGPHVVAWDFGMKRNIVRKLTDFGCRVTVVPARASAAEIRSLSPDG
                     LFLSNGPGDPAAIEYVIPEIRALCDSGLPTFGICLGHQLLGIAYDGTTVKLPYGHRGG
                     NHPVKDLATGRVLITSQNHGFAVQGTESGVPGAPGLQVTHLNLNDGTVEGLRHKELPM
                     FAVQYHPEASPGPHDAYPHFQEFLAAMAGQRA"
     gene            complement(7884..8240)
                     /gene="secG"
                     /locus_tag="VGA78_04045"
     CDS             complement(7884..8240)
                     /gene="secG"
                     /locus_tag="VGA78_04045"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX9893067.1"
                     /translation="MYYFLLAVLIVDGLLLGVVVLLQAGQGGGLASLGGGAPEKVLGG
                     RQATTLLHQLSWVFGGGLMVLSLLLSLVASNRTAGQSDVQRQLRQQTAPLPTAPLNTA
                     PPPAPVAPPPAPTKTP"
     gene            complement(8316..9704)
                     /locus_tag="VGA78_04050"
     CDS             complement(8316..9704)
                     /locus_tag="VGA78_04050"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEX9893068.1"
                     /translation="MTRSLRSAAVLGILALGGCDSLDVGDLNNPGLDELEQSPSRVGV
                     NTAATGLLIGLRVGIAEPNGWIPLLAALGREGFNLNTTSDPRYIAEMFVGPLDPGSGA
                     FGANFWGARYANIRNTVVVLNAVENVVEFTDEEKDGIRGFAKTIQALELLRVIVTRDD
                     NGAVIDVDRPPTGEPGAIATKAEVYARIIALLDEGNTHLQNAGGEFSFGLGLGFSGFD
                     APPTFARVNRALRARVAVYRDDFAGALTALAQSFIDPGQPLSVGVYHGYGTGSGDLAN
                     NIVQGAAQVRANPDLLTAAQLRANGQPDLRVTSKIVTGDPFTGIAGTASITSDKHFTI
                     YPSNTSPVPIIRNEELILLRAEANLGLGNVTQALVDINLIRTNAGGLPAYSGSTAPAA
                     VLDELLYNKRYSLLWEGGHSWIDYRHYGKLTSLPRMVSTGKFFTKMPFPTNECLVRTP
                     QPATGCVPENGI"
     gene            complement(9720..>12180)
                     /locus_tag="VGA78_04055"
     CDS             complement(9720..>12180)
                     /locus_tag="VGA78_04055"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX9893069.1"
                     /translation="GGVQVRLRGVTSVNATAEPLYVVDGVVLSDIAIPSNQNAITSAA
                     GGSSPSLNQDGQVNRIADLNPAEIESIEILKGASAAAIYGGRASNGVVIIRTKRGRIG
                     DPRFTLSQRFGFSSLFRKYGSRQFADAADVDAAYNTTGLGAQYCGAGACPFFDHEEEL
                     GGSKALSYQTIGSISGGTEATRYYASGTVESSPGVIHNTGFQRQSARLNLDQRFTQKV
                     NVSANMNVIHTLAERGITNNDNAGVSYYYVLTGTPSFIDLRRRPDGTFPLNPFQPSNP
                     LQTNALVSNQESVWRYIASGRLQYTPITTERSSLELSAIGGVDYFIQKNSIFSPPNLQ
                     FEDDDRLLGTSLLSNSDNLNLNLTGNAVHNYRGGGFNARTSAGLTYAEREADINRIES
                     RDLIAGQPNVSAGTSVRVREIRTLIKNFGFFLQEELLLLNERLQLTGGIRADQSSLNA
                     DASALYYYPKAAASYRIENTGSSWFDEVKFRAAFGQTGNEPLYGQRFTPLNSTLNLGG
                     IAGTVVGGTTGSTDLHAERQQEIEVGLDGQFFDNRLALEASYYRKDVKELLLTRNLPP
                     SSGFAQEIFNGGKLRTQGVEVTATLIPVQSATTSWLLRTTFADNHSTITELPVPPFQT
                     GGFATSLGVFQIEEGKSATQIVGNYLLPDGTRAPDAKAVGDANPDFKMSFTNEITYKG
                     FNFHVLLDWQQGGNVVNLTRLLYDANGLSPDVEAAGERIGTWATGETAIYVESATFAK
                     LREVAVSYELPRSVVQSIWSGVRTAGLSLSARNLIWFATPYSGFDPEVSNFGNQPIAR
                     NIEVTPYPASRTFYFTINVGF"
BASE COUNT         2048 a         4144 c         4023 g         1965 t
ORIGIN      
        1 tgtagtccgg agcgcaggtt aggccaagtc ggccggcccg gaaacgcgtg gggccgcgat
       61 cctcatcgga tgcggcccct gtcggtctgc gggtccttct cttcgctcaa cgatccagac
      121 tgccgaactg cggaccctcg accgttgcgg taacggtatc ggcggccgaa accacgattc
      181 ccggggccac cggaagctgc gccgactggg cacacccggc gatcaagagc acaatcacgg
      241 acgccagaac gcaaagccgc attcacttgc ctccgtgtca gacctggtgg atccagcgct
      301 ccaatgctac gactcgccag cgaacgctgc tatcgcatgc ctatgtggtc agggtcagac
      361 cagacgctcg cgcaaagccc ggctgaccgc ctccgccacg ctgtggacct ggagcttgcg
      421 gtagatcgac cggatatggg accggacggt atccaggctc acgcccagct catctcccac
      481 ctgcttgtag gagcggccgt tgaccaggcc ctgcagcaca tccttttccc ggtcggtgag
      541 cgagggtgct tctccccgct gcccctgtgg gaccgggggg gcggtgcgaa ccacgtccag
      601 aatggtccgg gccacgccgg ccgtgagagg agcgccaccc gccacgatgc tctcgagctg
      661 gtgcagcagc tccagggccg acgagcgctt gaggaggtaa ccatcggcgc cggcgcagat
      721 ggcgttgacg atggagttca catcctcaaa gaccgtgagc accacgattt gaatgttggg
      781 gagcatcgcc ttcaggcgac gggtcacctc aacgccgtgc attccgggga gatcgaggtc
      841 catgaggacc acgtcccagg gctgggtttc gccccgtgcg atactgacgg cggcagcttc
      901 gagggcgtcg gcgggacggg cataggcacc gccccatgtg aagcccggcg cgtgggtgaa
      961 caacgccgcg aggctgtcac ggtaacgcgc atcatcctcg atggcgcaca cccggatggt
     1021 cattgtgagt tccatagtca gcttgggtga cgaccggata actctgcgca gcacacagag
     1081 ctgggtccag tcacatcatc atgcgaggcc gatgaggctc gaacagaatt tcgacggtgg
     1141 taccccggcc gggggttgaa tcaactttga gcgacgcccg gatccgttcg gcccgccgtt
     1201 tgagggcccg ctgccccaaa ccggtgccgc ggggggccgc atccccattg ggatcgaagc
     1261 cgatcccgtc gtccttgacc cacatgcgcc aatgccggcc cgccggctga atccccaggg
     1321 tgatggtcct ggcgtcggca tggcgcacgg cgttatgcac cgcctccagc gcgatgagcc
     1381 ggagatcgtg ccgcacggcc ggatcgagct caccttccgg ccattgctgg ggatagtcca
     1441 tgtggagcga gggatggggt cccggcacca gccgcgccgc ccgctccgcg agatcggccg
     1501 ccagaacgcc cagcgtcacc cgccccgagc ggagcgcgcc cacgatatcg gtcagcttgc
     1561 cgcccagctc gcccgcggtc agcgcgatac gctgggcgaa gtcgcgccgc tcgccgtcgg
     1621 ccacgtcggg ccgcgaggcc acacccgcca ggatgccgat gcttcccagc ccggcaccca
     1681 gctcatcgtg caggtccatc gcgatggcgg tgcgttgccg ctccagcccc agcagcacgg
     1741 cggtgcgggt gcggtgcgcc accagcaggg tcccggccag caacagggcg cctaacagca
     1801 gcagcgaggg gcgccggtac cagggcgcgg gcaccgtgaa cgcgaccggg gcgctgggtc
     1861 ggctccagcg ctcgccatcg atcgacgcgc gcaccgccgc cgcgtagcct cccggcgcca
     1921 gctgcgagag ccggaactgg ggcacaccgg tgctgggtgg cgaccaggga ctctcggggg
     1981 tgagctgcag ctgggtctgg agccggctcc ggtcgcggta ggtgaggacc gcgaagcgaa
     2041 gctccaccac cgcatcgggc acgctcaacc ggtgtggttc gcccaccggc acctccagcc
     2101 cgttcaccat cacgttggag atctcgacca gaggcggatc ccgccggatc cgccgggccg
     2161 cgatgggcac ccgggtgagg cccaccgagc tgaccagcca gacggtgcca tcggtgcttt
     2221 cgaccagccc gttaccctct tccgtctgca ctccctgcca ggtggacaac cgctccagca
     2281 cccgccagcg ttgcggagtc aacggttcgg gtaccacccg gatgaccgcc ccggccgaga
     2341 gcacccagac acccccggac ggtgactcgg cgaacccgtt gatgaaccgg gaaggcagtt
     2401 cccacgagct ttggaccggg cgccatccgg catcgtggta cacccatacg ccgttgcggg
     2461 tggcggccca cagcccgccc ggcacggtga tgaagtcgag gatatcgccc gcaccggcca
     2521 ggttggtgca ggcccatccc tcgtccttga gcctgcggcc gtccgcggtg gcccgccggc
     2581 agacccgctc cccggcaccg gtccagatcc gccccgccga atcggtgtgc acggcgttga
     2641 gccgctgatc ggaagtctgc acccgctcgg gcgcggcgcc gccgggcgag agccggtaga
     2701 ggccacggct ggtcgcgaac caggtcggtc ccccatcgga cgccgcgcaa tccgacgcca
     2761 ccgctccgtc gggccatccg acgcgggccc aactctctcc ctgaagctgg taccatcgcc
     2821 cccgcgtatc ggtcgccacc agtcggccgt cggaagtccg gcagatccgg cccgagatct
     2881 gggcctgagc ctcgaaggcc cgtcccgggg ttgggcgggc cggcaccccg ctcagcccgg
     2941 atgaggtgga aacccacacc acgccccgtt cgacgataac gaattgcgcg taggtcgacg
     3001 gcagcccgtt gctttcattc caggtcaccg tctccggctc agggaactgc atcagtccgt
     3061 ggggcgatcc cagccagacc gatccttcgc gatccaccag cagcggcccg ccgccggtga
     3121 ccccgcgagc cgcctcgatg atctcgggcg gctcacccgg ccgcagcatc gcgaccccgc
     3181 gatcgtagga cacccagagc gcgccgcccc gctccgccac cgagaaaggc cgccgcgatc
     3241 gcagctcgag cagcacgtcg gtggcgccgg catagcgttg catcaggcgc agggtgcttt
     3301 cgcccaccca ccccaccacg acgaaatcgt ccgggccgcg gatcagcaga tcggtgggcc
     3361 gctcgatgtc gaacagccgg tcgaactggc catcggcccg ccgccgccag acccggcgct
     3421 gcgatcccac cagcaagacg ccgcgaccgg tccgcagcag ttgcagccga tcgcctggat
     3481 ccagaggcgg cgcggattcg cggcgccact gccccgagat gctgagccgg gccatccggt
     3541 cgggccagag tacccagagt gttccgtcct catcgatcgt catggccgag accccgatga
     3601 ccggccggcc gtcgggcccg agcagaggaa ccaggccgtt gggccgcacc gaatacaccg
     3661 cgtcccggtc gtcgcgcacc accaccagac gtcccttccc ctgcagctcc cgaacggcac
     3721 ccgtcaactc ggcccggccc caggaccgca tgtcgctgcc gtcgtagcgg accagacccg
     3781 ccacggtccc gatccagagg aatccggccg cgtcctgcgc caggctggtg acgaagggaa
     3841 ccgccagccc ctgctgctga tcgtagatcc ggatgaggcg ctgctgagcc gccgccgctg
     3901 caggatgcag caggcaggcg aggaggaggc agaccagcct aacgacggcg actccgggaa
     3961 cgttcatggg cttccttgcg ccggtcctcg ggctccgcgg gggaatcaac ggtgcggatt
     4021 tgccgcagac cttcgtacag gactatacca acggccgtcg cgagattcag gctccgcacc
     4081 ggcccgttca tcggaatccg atagcagcgc tccgggtgct tctcgagaat ccgttccggg
     4141 aggcccaggg tctcattgcc gaacaccagg cagctgttgg gctgaacggc agcatcccag
     4201 taggaccggg tggcattggc ggaaaagtac agacatcgat cccggctgat ggcatcgcgg
     4261 aacgcgcgcc actcgggatg atgccacaga tccacgtgct cccagtagtc cagtcccgca
     4321 cggcgcagat cccgatcggc cagcgaaaaa cctaactgtc cgatgagatg caggctgctg
     4381 tcggtggcgg cacacagccg cgcgatgttc ccggtgttcg gaggaatctg gggctcgatc
     4441 agggccacgt gcagcgccaa ccgctcaccc tcctctcgtg tgcatttccc ggcggggatc
     4501 gtcccgcagc cgctgcagct cgtagagcgg cgcccgttcc ggcgtcgctc ggcgaagctc
     4561 ggcgccccgg tcggcccgct cggtccagct cccccggatc agcgattcca gggccccatc
     4621 gctggcgccc caacgcagcg ggtcgcgcag atcggtgccc cgatcggcgt agaggcactg
     4681 ataccaggtc ccgtcagccg tgatccggct tcggtcgcaa tcgcggcaga aaggcgcggt
     4741 caccgacgcg ataatcccga acctggtgcc gtctcccagc gcgaaccgtt ccgccggagc
     4801 cgcaatcgag ctccccgcac cggctcgcgg cagcagcgag accgggccgt agcgcgccga
     4861 gatcgcggcg aggattgctt cccggctcac cacctgcgcc ggcgaccatt gggtggcacc
     4921 tcccacatcc atgtactcga tgaaacgcag ctcggcgttc tcggcccggg cgaactcgag
     4981 caggtcggtg atctcgtcgt cattgaagcc ccgcatcacc accgagttca gcttgaccgg
     5041 gcccagcccc gcgctccggg cggcccggat gcccgccagg atgtcggcgt gccggttcga
     5101 gcgggcgaag gccgccagcc gctcggggcg cagcgtgtcg aggctcaccg tgacccggtc
     5161 gaggcccgca tcgcggagcc gctgggccag cgcggcgagc agcactccgt tggtggtgag
     5221 cgccagatcg tcgagcgccg gcacctctcg caacatggcc accagcgcgg gcaggtcgtg
     5281 tcgcagcagc ggctcgccgc cggtgagccg aaccttgcgc acgcccagcg cggcgaagat
     5341 ccgggctacc cgcgtcaact cttcgaaggt gagaatggaa tcccgcggga gccagacgta
     5401 gtgctcctcc ggcatgcagt accgacagcg caagttgcag cgatcggtga ccgacagccg
     5461 gaggctgccg agcggccggt tcaggcggtc cagtacgcgg ggcgtcaccg ggccggctcc
     5521 gcgacggccg cgggcacggt gcctccgggc gcggtcggat cgacccaggc ttcggtccca
     5581 tcggcgtagc gctcccgctt ccagatgggg acccggcgtt tgagctcttc gatcacgtag
     5641 cggcaggcag taaacgcctc atcccgatgc gcggatgccg ccgccacggc caccaccacg
     5701 tcgccgatca ccagccggcc gatccggtgc cgcagcgcga tgcggcaagg ccagcgcgat
     5761 tccgcttcgg cgacgattcg tccgcactcg gcctcggcca tcggaccgaa ggcctcgtac
     5821 tgcagctcga ccaccgttcg gcccgcgtga tgatcccgca cggttcccag gaacgtggcg
     5881 atcgccccgc gatcgggcgc ctccacccac tgcaccagga gcgatggctc gatcgggtcc
     5941 gaggtcagat agtccacgct cagcctcccg ccatcggggg caacaaagcc agctcgtccc
     6001 gagccgcgag acgggtatcg tatccgacct gatcgcatcc tcgcgcgacc agcaggcggg
     6061 ccggtaacgc cacgcccccg gggagggccc gaacccggct gatggcctct tcgaccgtgg
     6121 ctccgaaggg gacctcgagc gttagttcgg atcggcccag caactcggcg tagcgggcga
     6181 agagcaggac tctgatggac atcgatgtgt ctgtcatgac tccggacatt atcgcgggac
     6241 cgcggtagcg gctgcaagca ccggaaacga aacgaggacc ggcgagccgg tcctcgtgcc
     6301 cctggatgcg gagcccggac ttcagtcgaa tgcggacgcg gtcgagccga gctcgccggg
     6361 cggctcgtcg gtgtcttccg ccaccagggc ccgcaactcc ttgctgggct tgaacaccgg
     6421 gactggacgg gcggccactt ccaccggttc accggtccgg ggattccggg ccatccgggt
     6481 cttgcggcgc cggatcttga aggttccgaa accccgcacc tcgatatttc gctgttcctt
     6541 caaggctcgc ttgatggcgt ccaggaagag gtccacgacc cgcgcgcagt ccttctttga
     6601 gatcagggga ccagaggtcc gagcaatagc agcggtcacc tgctccacga gatcagcctt
     6661 ggtcatgcaa cccccggtta aagggacgcc cagccctgaa ccagctgagt tatcgtacga
     6721 gcttaaccgt tgtctgtcaa ggggttgcgg cgtttcaggc cctctgacca gccatcgcgg
     6781 ccaggaattc ctggaaatgc gggtaggcat cgtgcggtcc cggtgatgct tccgggtgat
     6841 actgcacagc gaacattgga agttctttgt ggcgaagacc ttccaccgtt ccgtcgttca
     6901 aattgaggtg ggtgacctgc aaaccgggcg cgccgggcac accggattca gttccctgca
     6961 ccgcgaaccc gtgattctgc gaagtgatta gcacccgacc ggtcgccaga tccttcactg
     7021 ggtgatttcc gcctctgtga ccatagggca gcttcaccgt tgtgccatcg tacgcgatgc
     7081 caagcagttg atgcccgaga cagatgccga acgtgggaag accggagtca cacaaggcgc
     7141 gaatctccgg aatcacatac tcgatggccg ccgggtcgcc gggaccgttc gagagaaaca
     7201 agccgtcggg agacagcgac cggatctcgg cggcgctggc ccgcgccggt accacggtga
     7261 cccggcaccc gaagtcggtc agcttccgga cgatgttgcg cttcataccg aagtcccacg
     7321 ccacaacgtg cggtccttca tcaccttccg tgtacggcac gctgacgccg gccagcgagg
     7381 ccagatcctg tccttccatc cgcggtgacg ccaggagttg ttggtgaacc aggtcgctcg
     7441 gttcgctgcc tgtcgcgatc acaccccgca tggccccgcg ttcccggatg tgccgggtga
     7501 ggcgccgggt atcgacccct tcgaggactg gaacgccgtt ggcctgcaac cagttgccga
     7561 gcgaatcggt ggctcgccag ttggaagggt ggcgggacag ctcgcgcacc accactcccg
     7621 agatctgggg ggtggccgac tcgagatcct cggcgttgat cccgtagttc ccgatcatcg
     7681 gcgccgtcat cacgacgatc tgccccaggt agctgggatc ggtgaaggtt tcctggtagc
     7741 cggtcatgct ggtggtgaac accacttcgc cgaacgccgg ctcgaccgga agcgacgtgg
     7801 tgcccgcgaa ccaggcgccg tcttcgagca gaacgaacgc ggggtgaccg gtcatccggc
     7861 caccccgcat ggagattgga gcctcacggc gtcttggtgg gcgcgggagg gggcgccacg
     7921 ggtgcaggag gtggcgcggt gttgagcggc gccgtcggca acggcgcggt ctgctgccgt
     7981 aactggcgct ggacgtcgct ctgaccggcg gtccggttgg atgcgaccag cgacaacagc
     8041 agcgaaagga ccatgagtcc gccgccaaac acccagctca gctggtgcag cagcgtggtt
     8101 gcctgacggc cgccgaggac tttttcaggg gcgccgccac ccaggctggc gagaccaccg
     8161 ccctgccccg cctggagcag aaccacgacg cccaggagca ggccatcgac aatgagaacc
     8221 gcgagcagaa agtagtacat aagctaagtc gcgaaactta cttagcaccc ggccgcaggt
     8281 caacgcgttg cccgtatcct tgattcccgg ctagctcata tcccgttctc cgggacacag
     8341 cccgtggcgg gttgtggcgt ccgcaccaga cactcgttcg tcgggaacgg catcttggtg
     8401 aagaacttgc cggtggacac catgcgaggc aggctggtga gcttgccgta gtggcggtaa
     8461 tcgatccagc tgtgacctcc ctcccatagt agcgagtacc gcttgttgta gagcagctcg
     8521 tccaggaccg ccgccggggc ggtagaaccg ctgtaggccg gcaacccgcc ggcgttggtc
     8581 cggatgaggt tgatgtccac cagggcctgg gtgacgttcc ccagccccag gttggcctca
     8641 gcgcggagca gaatcagctc ttcgttccgg ataatcggca cggggctggt attgctgggg
     8701 tagatggtga aatgcttgtc cgaggtgatg ctcgccgtgc cggcaatacc ggtgaacgga
     8761 tcgccggtca cgatcttgct ggtcacccga aggtcgggct gcccgttggc acgcagctgc
     8821 gcggcggtga gcaggtcggg gttggcgcgg acttgcgcgg caccctgcac gatgttgttg
     8881 gccaggtcac ccgacccggt cccatacccg tgatacacgc cgaccgacag cggctgaccc
     8941 ggatcgatga acgactgggc cagggcggtc agcgccccgg cgaaatcgtc gcgatagacg
     9001 gcgaccctgg cccggagggc acggttcacg cgagcgaacg tgggcggcgc gtcgaacccg
     9061 ctgaatccca ggccgagccc gaaagagaac tcgccgccgg cgttctgcag atgggtattg
     9121 ccctcatcca gcagcgcgat gatccgggcg tacacctccg ctttggtcgc gatggctccc
     9181 ggctcgccgg taggaggccg gtccacgtcg atcaccgccc cgttgtcatc ccgggtcacg
     9241 atcacccgga gcagctccag cgcctggatg gtcttggcaa acccgcggat cccgtccttc
     9301 tcctcatcgg tgaattcgac cacgttctcc accgcattca gcaccaccac cgtgttgcgg
     9361 atgttggcgt agcgtgcccc ccagaagttg gccccgaacg cgccggaacc gggatccagc
     9421 gggccgacaa acatctccgc gatgtagcgc gggtccgagg tggtgttcag gttgaagccc
     9481 tcgcggccca gggcggcaag cagcgggatc cacccgttgg gctcggcaat gcccacccgg
     9541 agcccgatga gcagcccggt ggccgcggtg ttgaccccga cccggctggg actctgctcc
     9601 agctcatcga gcccggggtt attcaagtct ccgacatcca gactgtcgca gccaccgagc
     9661 gccaggatgc cgaggacggc agcactacga agcgaccgtg tcatggcagt accctcccct
     9721 cagaagccga cgttgatggt gaagtagaaa gtgcggctcg ccgggtacgg cgtcacctcg
     9781 atgttgcggg cgatgggctg gttgccgaag ttgctgacct cgggatcgaa gccgctgtat
     9841 ggggtcgcaa accagatgag gttgcgcgcg ctcagcgata ggccggcggt ccggacgccg
     9901 ctccagatgg actggaccac gctgcgcggc agctcgtagg acaccgccac ttcccgcagc
     9961 ttggcgaagg tggccgattc cacgtagatg gcggtctcac ccgtagccca ggtaccgata
    10021 cgctcgcccg cggcctcgac gtcgggcgac agcccgttgg cgtcgtagag caggcgggtg
    10081 aggttcacca cgttcccacc ctgctgccag tccagcagca catggaagtt gaatcccttg
    10141 tacgtgatct cgttggtgaa cgacatcttg aagtcggggt tcgcgtcgcc gacggccttc
    10201 gcgtcggggg cgcgggttcc gtcgggaagc aggtaattcc cgacgatctg ggtggcggac
    10261 ttcccctcct cgatctgaaa cacgcccaga ctggtggcga agccgccggt ctggaacggc
    10321 ggcaccggca gctcggtgat ggtgctgtgg ttgtcggcga acgtggtgcg aagcagccag
    10381 ctggtggtcg ccgactgaac cgggatcagc gtcgcggtga cctcgacccc ctgggtgcgg
    10441 agcttgcctc cgttgaagat ctcctgggca aacccggagg agggcggcag gtttcgcgtc
    10501 agcaacagct ccttcacgtc cttccggtag tagctggcct cgagggccag ccggttgtcg
    10561 aagaactgcc cgtccagtcc gacttcgatt tcctgctgcc gctcggcgtg gaggtcggtg
    10621 ctcccggtcg taccacccac caccgtcccg gcgataccac ccaggttcaa ggttgagttg
    10681 aggggggtga acctctgacc gtagaggggt tcgttcccgg tctggccgaa agccgcccgg
    10741 aacttcactt cgtcgaacca ggaagatccg gtgttctcga tccggtatga cgccgcggcc
    10801 ttggggtagt aatagagtgc gctggcgtcg gcgttgaggc tcgactggtc cgcccggatg
    10861 cccccagtga gctgcagccg ctcgttgagc agcaggagct cttcctggag gaagaacccg
    10921 aagttcttga tgagcgtgcg gatctcacgc acccgtaccg acgtgccggc gctcacgttg
    10981 ggttgcccgg cgatcaggtc acgcgattcg atccggttga tgtccgcctc gcgctcggca
    11041 tacgtcagac cggccgaggt ccgggcgttg aatccgccgc cccggtagtt gtgcaccgcg
    11101 ttgccggtga ggttcaggtt cagattgtcc gagttgctga gcagcgacgt ccccagcagc
    11161 cggtcgtcgt cctcgaattg caggttcggg ggcgagaaga tgctgttctt ctggatgaag
    11221 tagtcgacgc cgccgatggc cgacagctcg agcgagctgc gctcggtggt gatcggagtg
    11281 tactgcagcc gccccgaggc gatatagcgc cacaccgatt cctggttcga caccaacgcg
    11341 ttggtctgga gcggattgga cggctggaac ggattcaggg ggaaggtccc gtcggggcgc
    11401 cgccgcagat cgatgaagct gggggtgccg gtgaggacgt agtagtaact caccccggcg
    11461 ttgtcgttgt tggtaatgcc ccgctcggcc agggtgtgaa tcacattcat gttggccgac
    11521 acgttcacct tctgggtgaa gcgctggtcc agattgagcc gcgccgactg gcgttgaaat
    11581 ccggtgttgt ggatgacccc ggggctgctc tccaccgtgc cggacgcgta ataccgggtg
    11641 gcctcggttc caccgctgat gctcccgatg gtctgatacg agagcgcctt gctcccgccc
    11701 agctcctctt cgtggtcgaa gaacgggcag gcgcccgccc cgcagtactg cgccccgagc
    11761 ccggtggtgt tgtacgcggc gtcgacgtca gccgcatcgg cgaactggcg gctgccgtac
    11821 ttccggaaca ggctggaaaa gccgaaccgc tgggacaggg tgaaacgggg atcgccaatg
    11881 cgaccgcgct tggtccggat gatcaccacc ccgttggaag cccggccgcc gtagatcgcc
    11941 gcggccgacg cgcccttcag gatctcgatc gactcgatct ccgccgggtt cagatcggcg
    12001 atgcgattga cctgtccatc ctggttgagc gagggactcg agccccccgc tgccgaggtg
    12061 atggcgttct ggttggacgg aatcgcgata tcgcttaaca cgacaccgtc gaccacgtac
    12121 agcggttccg cggtggcgtt caccgaggtg accccccgca gccgaacctg gacgccaccc
//
LOCUS       DASWKS010000131         2781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3024125, whole genome shotgun sequence.
ACCESSION   DASWKS010000131 DASWKS010000000
VERSION     DASWKS010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3024125"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VGA78_04060"
     CDS             complement(<1..653)
                     /locus_tag="VGA78_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893070.1"
                     /translation="MTTQVMPESQVTDTFPINGTDFVEFWVGNARQAAAYYQHAWGYR
                     LTAYRGPETGTRDRASYVLEQGKIRLILTTAIRPDGPIADHVARHGDGVRDIAFWVDD
                     ATDAYRKALQHGGQGVQEPQVLEDEQGRVVHAAIRTYGETIHSIVERKDYRGPFMPGF
                     VPATSLVQPHAVGLLYVDHCVGNVELGRMNHWVAFYRDVLGFTQLISFDDKDISTEYS
                     "
     gene            complement(718..2097)
                     /locus_tag="VGA78_04065"
     CDS             complement(718..2097)
                     /locus_tag="VGA78_04065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9893071.1"
                     /translation="MLRPRPEDIRALLRLAIPVVVVQVGLMSMGTVDTLMVGRVSASA
                     LAAVAIGGLYSMVATFSGQGVLMALDPIVSQAAGAGDRPSIALGVQRGLLLAAGLSVP
                     LTLYHLVAGPVLRVLGQPADVVPLAHQYNVLLVPGILPFFGFIVLRQTLQALHRLRAI
                     VSTILIANLVNAAVNWVFIFGNLGMPAMGVRGAALATSVSRWLMAFMLLALSWPELRS
                     LVRPWLKAAYELAPLRRMVRLGVPIALQMELELICFGAVALLAGAMGTLQVAGHQIAI
                     NMAALTYMVPLGVSAAAAVMVGRAVGAGDQIEARRQGATALLVGVGFMSATAIGFLFL
                     PGPLARLYTTDAAVITVAMSLIPLAGGFQVFDGTQVVAIGILRGLADTRGPFVINLMG
                     YWVIGMPVGVWLAYPLGMGVVGLWWGLVIGLGAVALILVVRVRRVLRRPLTRFQVEHA
                     AAEPVILSS"
     gene            complement(2226..2299)
                     /locus_tag="VGA78_04070"
     tRNA            complement(2226..2299)
                     /locus_tag="VGA78_04070"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2263..2265),aa:Arg,seq:tct)
     gene            2413..>2781
                     /locus_tag="VGA78_04075"
     CDS             2413..>2781
                     /locus_tag="VGA78_04075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893072.1"
                     /translation="MHVFATTEIAAALLQLTVTLGLAGLFFFLHRRHHKAHFFWWGVA
                     STLYALRLAAIITFLATDQWSWLYWHQVATGWTALALLWAALVFSRQLVWRARYAVAL
                     LFQPVWSYIAIFRLSDFMLAA"
BASE COUNT          508 a          949 c          902 g          422 t
ORIGIN      
        1 gagtactcgg tcgagatgtc cttgtcatcg aagctgatca gctgggtaaa gcccagcacg
       61 tcgcggtaga aggcgaccca gtggttcatc cggcccagct cgacgttgcc gacacagtga
      121 tcgacgtata gcagtcccac cgcgtgcggc tggaccaggc tggtggccgg cacgaacccg
      181 ggcatgaagg ggccccgata atccttccgt tccacgatcg aatggatggt ctcgccgtag
      241 gtgcggatgg ccgcgtgcac cacccgcccc tgttcgtcct ccagcacctg gggctcctgg
      301 acaccctggc cgccgtgctg cagggccttg cggtaggcgt cggtggcgtc gtcgacccag
      361 aacgcgatgt cgcgcacccc gtccccgtga cgagccacat gatcggcgat cgggccgtcg
      421 gggcggattg cggtggtgag gatcagccgg atcttgccct gctccagcac atagctcgcc
      481 cgatcccggg tgccggtctc gggcccgcgg tacgccgtca gccggtagcc ccaggcatgc
      541 tggtaatagg cggcggcctg ccgggcgttg ccgacccaga actcgacgaa gtcggttccg
      601 ttgatcggaa aggtgtcggt gacttgcgat tcgggcatga cctgggtggt cattgggatc
      661 tcctgatcgc cggactgccc ataatctagc gggccgtcat cctgagcgaa gcgccgctca
      721 ggatgacagg atgacgggtt ccgccgcggc gtgctccacc tggaaccgcg tcagaggacg
      781 gcgcagcacc cgtcggaccc ggaccaccag gatcagggcc acggcgccga gaccgatcac
      841 cagaccccac cagagtccca cgacgcccat tccgagagga taggccagcc acactccgac
      901 cggcatgccg atgacccagt accccatgag attgatcacg aacggtcccc gggtatcggc
      961 tagcccgcgc agaatcccga tcgccaccac ctgggttccg tcgaagacct ggaagccgcc
     1021 ggccagcggt atcagcgaca tcgcgaccgt gatgacggcc gcatcggtgg tgtagagccg
     1081 ggccagcggt ccgggaagga acagaaagcc gatcgcggtg gctgacatga accccacgcc
     1141 gaccagcaac gccgtcgccc cctggcgccg cgcttcgatc tggtcccccg ccccgacggc
     1201 gcgacccacc atgacggcgg cggcggcact cacgcccagg ggtaccatat aggtaagcgc
     1261 cgccatgttg atggcgatct ggtggcccgc cacctggagc gttcccatcg cgcctgccag
     1321 cagggcaacg gcgccgaaac agatcaactc cagctccatc tgcagcgcga tgggaacgcc
     1381 caaccggacc atccgccgga ggggggcgag ctcatacgcc gccttgagcc agggccggac
     1441 cagggaacgc agctcgggcc aggatagcgc cagcagcatg aacgccatca gccagcgcga
     1501 aacactggtc gccagggccg cgccccgcac tcccatggcc ggcattccca ggttcccgaa
     1561 gatgaagacc cagttgaccg ccgcgttgac gaggttggca atgaggatgg tggaaacgat
     1621 cgcgcggagc cggtggagtg cctgaagcgt ctgccgcagc acgatgaagc cgaaaaaggg
     1681 gaggattcca ggcaccagaa ggacgttgta ctggtgggcc agaggaacca cgtccgccgg
     1741 ctgccccagc acgcgcagaa ccggccccgc caccaagtgg tagagagtga ggggaacgct
     1801 caaaccggcg gcgagcagca gcccccgctg gaccccgagg gcgatgctgg ggcggtcgcc
     1861 ggcgccggcg gcctggctca cgatcggatc gagcgccatg agcacgccct gcccggagaa
     1921 cgtggccacc atggaataca ggccgccgat ggctacggcg gcgagggccg aggccgagac
     1981 tcggccgacc atcaaagtgt cgaccgtgcc catggacatc agccccacct ggacgaccac
     2041 gaccgggatc gccaggcgga gcaatgcccg gatgtcttcg ggacggggtc tcaacacggt
     2101 cggaagggtc ggaacagtcg gaaagtctca aaaggtcgga agggtcggaa gcatcgtaaa
     2161 ggtcggaacc gtcgcagggg tcgttccgac tcgtacgacc tttccgaccc ttccgacccc
     2221 tgttatgcgc ccggagggaa tcgaaccccc gacccacagc ttagaaggct gttgctctat
     2281 ccaactgagc tacgggcgcg ggctgcgaaa aatctaaggg gggttccccc aagtcgcgac
     2341 agggaccggg aacctcggcg ggacccgtcc gacccttacg accttccgac ccttccgacg
     2401 tagtattcag ccgtgcacgt cttcgccacc accgagatcg cggccgccct gctccagctg
     2461 accgtcacgc tggggctggc gggtctgttc ttctttctgc accgccggca tcacaaggcc
     2521 cacttcttct ggtggggagt cgccagcacc ctctacgccc tccgtctggc cgcgatcatc
     2581 acctttctgg ccaccgacca atggtcctgg ctctactggc accaggtcgc caccgggtgg
     2641 accgcgctgg ccctgctctg ggccgcactg gtgttctcgc gccaactggt ctggcgggcg
     2701 cggtacgccg tggccctgct cttccagccg gtgtggtcct acatcgcgat tttccggctg
     2761 agcgacttca tgctggccgc g
//
LOCUS       DASWKS010000132         4898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3379742, whole genome shotgun sequence.
ACCESSION   DASWKS010000132 DASWKS010000000
VERSION     DASWKS010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3379742"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1155)
                     /locus_tag="VGA78_04080"
     CDS             complement(<1..1155)
                     /locus_tag="VGA78_04080"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX9893073.1"
                     /translation="MTGRAQSGADSVLHRPITLQLRNASLADALARLRHDHALPLAWS
                     GDVLPPDHRVTLALRDETLRNTLLALLSDTGLDFALTRQGTVVIVPRAAAGAAQSSSD
                     SAGADRSAERLRLATGVRQLDQIVVMGTAVSGAPQREQPNAMTVASSATLDDAPHSRL
                     ADLIRALLPGVALWERGPAGPPPQFAAVRGVSSFTTRGLKTYIDDIELASPELFTLVD
                     GRGIERIEVMRGPQGAALYGPDALNGIMQIITRKGHLGTPLRPRGSASLGSYDRPDLS
                     AASLWQDHALGLSGGGSTSSFDVVGSLARTGASGEVPWLNSWTSQAAGRAAFGPVLVS
                     GSARAGRHEYGAERLNTGTGATPVSAPQELSERGAGLTLTHAPSPHWRQTL"
     gene            complement(1244..2197)
                     /locus_tag="VGA78_04085"
     CDS             complement(1244..2197)
                     /locus_tag="VGA78_04085"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX9893074.1"
                     /translation="MSSELLARYLTGEATPEEREVVDSWAVSAPDHAAELERLRRAWP
                     AERQGDWNVDDAWNRVSGRLDQMRPAGGWARVPLAMAAALVLVFGGVFAWRALQPATV
                     PSGLVATGVAERRTIELPDGTSITLAPNSEVRIASGYGTAERRVDLTGQAWFAVQHNA
                     DRPFRVHAAGTVTEDLGTEFSIRALPGSSVVQVVLVSGSASLRRVGTPAVGAVVLHPR
                     DVARLSSSDSVPVVERGGPVELLVSWRDGLVNFSDAPLDSVVTELSSWYGVRFELADP
                     RLGSRRLSAPVRIDSLEEALEVLMLSLGVKVERSDSVIVIR"
     gene            2321..2890
                     /locus_tag="VGA78_04090"
     CDS             2321..2890
                     /locus_tag="VGA78_04090"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HEX9893075.1"
                     /translation="MASSPGFHQQTAQFLARIRAGDRDAFEQFFREWYPRLADYAQRL
                     LQNRDASEDAVQDVFVALWSRRDRLPEGDRLAGYLYRSVRNRALNQLRRQRTAGKWLA
                     VLDPDPAVPPDAETGIEDRELDQAYRAALAELSPRGREVFLLSRDQGLSYPQIADALG
                     ISIKTVETLMGRALRALRGRLLPRLDHPG"
     gene            2956..3675
                     /locus_tag="VGA78_04095"
     CDS             2956..3675
                     /locus_tag="VGA78_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893076.1"
                     /translation="MLVQSRFPSRLGVSALILALGACGEGPAAPESQSDLPLEASLEQ
                     MAAEANNAGDVDAAVAFSDGLLAIRLGVRPTELSVKVGDKSERYLAIVTGVAHTTADG
                     AILLRRSLVAWAGDPRPTALLQVTSFSDNAVFGYPSDLATRADPVGRARGTWVNLVRG
                     HTFVATSGRASIALASTGEACPNLPADSRLRCAVARYDVGIDGVFHQLRQRNARQADH
                     ASRIEISTEGGVAGVVITRIP"
     gene            3884..4120
                     /locus_tag="VGA78_04100"
     CDS             3884..4120
                     /locus_tag="VGA78_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893077.1"
                     /translation="MGTRVRLKASYDVSGFPPRSQVVLRALKKYGMIVADNGSDWFLS
                     GVADARWNDEEMNSLKVVRGGDFEVVRMTGVVTP"
     gene            4150..4851
                     /locus_tag="VGA78_04105"
     CDS             4150..4851
                     /locus_tag="VGA78_04105"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9893078.1"
                     /translation="MPRPILLLLHGALGAAGQVAPLVPLLETRFIPLTFGFPGHGDVP
                     LDGPFTTEHFADSLIAHLETEQRGPVDCFGYSMGGYVGLEVARRRPDLVRAVATLGTK
                     FAWSSVVAERELKFLDPALIRAKVPYFADQLQLRHTALPWEEVLRLTGEMMTALGASP
                     LLGPDALRQVSQRVRIMVGDRDATVTLEESAAAAKALPSGELEVLPMTAHPFEQVPLP
                     RLVQSLTDLFLGTDA"
BASE COUNT          744 a         1692 c         1675 g          787 t
ORIGIN      
        1 cagggtctgg cgccagtgcg gcgacggcgc atgcgtcagg gtgagacccg ctccccgttc
       61 ggagagctcc tgtggcgcgc ttaccggcgt tgcgccggtc ccggtgttga gccgttccgc
      121 accgtactcg tgccgcccgg ctcgcgccga gccgctcacc agcaccgggc cgaaggcggc
      181 ccgcccggcg gcctgcgagg tccagctgtt gagccacggg acttcaccgc tggcgccggt
      241 ccgggcgagg cttcccacca catcgaagct cgaggtggat ccgccaccgc tcagacccag
      301 ggcgtggtcc tgccacagtg acgcggcgga gaggtccggc cggtcatagg atcccagcga
      361 cgcgctgccc cggggccgga gcggggttcc caggtgtccc ttgcgcgtga tgatctgcat
      421 gatgccattc agtgcgtcgg gcccgtagag cgccgcgccc tgcggcccgc gcatgacctc
      481 gatccgctcg atgccgcggc cgtccaccag ggtgaacagc tcgggcgaag ccagctcgat
      541 atcgtcgatg taggtcttga ggccgcgagt ggtgaacgag ctgaccccgc gcacagccgc
      601 gaactgggga ggcggtccgg cgggaccgcg ttcccagagg gccacgcccg gcagcagggc
      661 tcgaatcagg tcggccaggc gagaatgggg cgcgtcatcc agcgtcgccg agctcgcgac
      721 cgtcatcgcg ttgggctgct cccgttgcgg cgcaccggac accgccgtgc ccatgaccac
      781 gatctgatcc agctgccgga ccccggtcgc gaggcggagg cgttccgcgc tccgatcggc
      841 tccggcagag tcactggagg actgcgcggc accggccgcg gcgcgcggga cgatgacgac
      901 cgtaccctgc cgggtcaggg cgaagtccag cccggtgtcc gacaggaggg ccaggagggt
      961 attgcgcaag gtttcatcgc ggagggccag ggtgacccgg tgatcgggcg ggagcacatc
     1021 gccgctccag gccagcggaa gcgcatgatc gtgtcgcaac cgggccagcg catcggccag
     1081 ggacgcgttc cggagctgga gcgtgatggg ccggtgcagc accgaatcgg caccgctctg
     1141 cgcccgtccc gtcataggcg cagccagaag ggtgagcgca agaccgatgc gttggctcga
     1201 tctgcgaaga cccgcgctcc ccggacccgg atccacgtga ttcctatcgg atcacgatca
     1261 cgctgtcgct ccgctctacc ttcaccccga gcgacagcat cagtacttcc agcgcttcct
     1321 ccagactgtc gatccgaacc ggtgcactga gtcgccgcga gccgagccgc gggtccgcca
     1381 gctcgaacct gacgccatac cagctcgaca gctccgtcac cacggaatcc agcggcgcgt
     1441 cactgaaatt gaccaggccg tcgcgccagg acaccagcag ctccaccggg ccgccgcgct
     1501 cgaccaccgg cacactgtcg ctggacgaga gccgcgccac gtcgcggggg tgcagcacca
     1561 cagcgccgac ggcgggggtg ccgactcggc ggagcgaggc gctgcccgac accagtacca
     1621 cctgcaccac cgatgagccg ggaagcgccc ggatcgagaa ctcggttccc agatcctcgg
     1681 tcacggtgcc ggccgcgtgc acccggaacg gccggtcggc attgtgttgg accgcgaacc
     1741 acgcctgccc ggtcaggtcc acccggcgct ccgcggtgcc gtagcccgag gcgattcgca
     1801 cttccgaatt gggcgccagg gtaatgctgg tgccgtcggg cagctcgatg gtgcgacgtt
     1861 cggcgacccc ggtcgccacc aggccggaag gcacggtcgc gggctgcagc gcccgccagg
     1921 caaagacccc tccaaagacc agcaccagcg ccgcggccat ggcgagcggc acccgggccc
     1981 atcccccggc gggccgcatc tggtcgagcc gtccggacac ccggttccag gcgtcatcca
     2041 cgttccagtc accctgccgc tcggcgggcc aggcccggcg gagccgttcc agctcggccg
     2101 catggtccgg ggccgaaacg gcccagctat ccacgacctc acgctcctcc ggcgttgcct
     2161 ctccggtgag gtagcgggcc aacagttcgg atgacatcga ctcgttcatt gttacgccca
     2221 aggacagcag gggttgtacc agtagacacg ggaggggccg gaaccccctg acagtatggg
     2281 gattggtccg taaaatgccg cagcaagccg gggatcggcc atggcgtctt caccgggttt
     2341 ccaccagcag acggcccagt tcctggcgcg gattcgcgcc ggggaccgcg acgcgtttga
     2401 acagttcttt cgcgaatggt atccccgcct ggcggactac gcccagcgcc tgctccagaa
     2461 ccgcgacgcc tcggaggacg cggtgcagga cgtcttcgtg gcactctgga gccgacggga
     2521 ccggttgccc gagggcgacc ggctggccgg ctatctgtat cgctcggtcc ggaaccgggc
     2581 tctgaatcag ctgcggcgac agcggaccgc gggaaagtgg ctcgccgtcc tcgatcctga
     2641 tcccgcggtg ccaccggatg ccgaaacggg catcgaggat cgggagctgg atcaggccta
     2701 tcgcgcggcg ctggctgagc tgtcaccccg gggccgggaa gtgttcctgc tgagtcggga
     2761 ccagggactg agctatcccc agatcgcgga cgccctcggc atttccatca agacggtgga
     2821 gaccctcatg ggtcgggcgc tgcgggcgct acgcggccgg ctgctgcccc ggctcgatca
     2881 cccgggatag gtccgtcagg gtaccgggcc ccgtgcggtg tcttctccgt ggcaacctca
     2941 accacggagt ctttcatgct ggtccaatcc cgctttccct cgcgcctcgg tgtgagcgca
     3001 ctcattctgg ccctgggcgc ctgtggcgaa ggcccggccg cgcccgagtc gcaatccgac
     3061 ctgccactcg aggcctcgct ggagcagatg gccgccgagg ccaacaacgc cggcgacgtg
     3121 gatgccgcgg tcgccttcag tgacgggctg ctggccatcc ggctcggggt tcgccctacc
     3181 gagctcagcg tcaaagtggg tgacaagagc gagcgctatc tcgccatcgt gaccggggtg
     3241 gcgcacacga cagccgacgg tgccatcctg ctgcgccgct cgctggtagc ttgggccggg
     3301 gatcccaggc cgacggccct gctgcaggtg acctccttca gtgacaacgc cgtctttgga
     3361 tatccgtcgg atctggcgac ccgggcggat ccggtgggcc gggcccgggg gacctgggtg
     3421 aacctggtcc ggggccacac cttcgtcgcc acctcgggcc gggcatcgat cgcgctcgcc
     3481 tcaaccggcg aagcctgtcc caacctgccg gccgactctc gcctccggtg cgcagtggct
     3541 cgatacgatg taggcattga cggtgtgttc caccagctcc gtcagcgcaa cgcgcggcag
     3601 gcggaccacg ccagcaggat cgagatcagt actgaagggg gagtggcggg agtcgtcatt
     3661 accagaatcc cataacagga agcagggagc agggagcagg gggcaggagg cagggagcag
     3721 ggagcaggaa ggcgagcccc ctccggtctc tttctccctg tttcctgctg cctgctgcct
     3781 gctccctgct tcctggttct tggtttgttg gcacgcctcc tgacgggggt tccggcatgc
     3841 gttcggcctc gggaattcag ggacctcctc ctcggtgccg cccatgggta cgcgggtgcg
     3901 gctcaaggct tcttacgacg tcagcggctt tccaccccgg tcgcaggtgg tgctgcgagc
     3961 cctcaagaag tacgggatga tcgtggccga taacggcagc gattggttcc tgagcggggt
     4021 ggccgatgcc cgctggaacg acgaggaaat gaactcgctc aaggtagtgc ggggtgggga
     4081 tttcgaggtg gtgcggatga ccggagtcgt gaccccttag gtcgccccgg ttttcgggta
     4141 ggttgtggcg tgcctcgccc gatcctcctg ctcctccacg gcgccctggg cgcggccggc
     4201 caggtcgccc ccctggtgcc gctgctcgaa acccgcttta tccccctcac gttcggcttc
     4261 cccgggcatg gcgacgtccc tctggacggc ccgttcacca ccgagcactt cgccgactcc
     4321 ctgatcgcgc atctggagac ggaacagcgt ggcccggtcg attgcttcgg ttacagcatg
     4381 ggcggttatg tcgggctgga ggtggcccgc cgacgtcccg atctggtgcg cgccgtggcc
     4441 acgctgggaa ccaagttcgc ctggtcgtcc gtagtggcgg agcgggagct caagtttctc
     4501 gaccccgcgc tgatccgggc caaggtcccc tatttcgccg atcagctgca gttgcgtcac
     4561 accgccctcc cgtgggagga ggtgctccgt cttacgggag agatgatgac cgcgctgggt
     4621 gcctcgccgc tgcttggtcc ggacgcgctg cgtcaggtat cgcagcgggt ccgaatcatg
     4681 gtgggagacc gcgatgccac tgtcacgctc gaagagtccg ccgctgccgc gaaagcgtta
     4741 ccgtccggcg agctcgaagt ccttcccatg accgcgcatc cattcgagca ggtgccgttg
     4801 ccgcggctgg tacagtcgct gaccgatctc ttcctcggga ccgatgcatg accctcaggt
     4861 accgggaatg ggagccggtt cccgccgccg ccggcctg
//
LOCUS       DASWKS010000133         7015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3379776, whole genome shotgun sequence.
ACCESSION   DASWKS010000133 DASWKS010000000
VERSION     DASWKS010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3379776"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /locus_tag="VGA78_04110"
     CDS             <1..458
                     /locus_tag="VGA78_04110"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX9893079.1"
                     /translation="EQGGEVSAGLVSAPALGQRWHAARGAGAWSGERRLRVSAVRDWD
                     RAQLFHGSLSGSEGREMPVGLTRLIQRAGRSRGFGDFWQHTLVAEGTGEVAVDPRVAP
                     WDIAALQVIVEEAGGMATTLDGRRSIYGGSLVTSNGVLHQEALAVLQQH"
     gene            complement(538..1932)
                     /locus_tag="VGA78_04115"
     CDS             complement(538..1932)
                     /locus_tag="VGA78_04115"
                     /inference="COORDINATES: protein motif:HMM:NF006596.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893080.1"
                     /translation="MRFLSLLTLAALSDAAPVLAQADAHRQLEREIFAELININTSDS
                     AGRTREAAEAMARRLTEAGFPAADVQILGHDPRYQNLVARYRGSGRGGRPILLMAHLD
                     VVDARREDWSFDPYQFREQEGYYYGRGTSDNKAGCAMLVANFIRLKGEGFVPDRDLIM
                     VLTADEETAGESIRWLVTQRRDLVDAEFALNTDAGGGELKDGKPTGFGVQTAEKVYLS
                     FNLEVRNKGGHSSLPEPDNAIYRLSEALARLSRHEFPVRLNETTRALFEQLAPTQPAQ
                     IGADMRAVVRSGDPAAAKRLSVVPYYNSVMRTTCVATRLLAGHADNALPQLAGALVNC
                     RMLPDDPPERVQAELGRVLADTAVHVSRAGEPTASPASRLRPDIMGPVERLVKQMWPG
                     AAVIPEMSTGATDGLYVRNAGIPVYGLSAIFERIDDVRAHGRDERVGVKAFHDAAEFW
                     FRLVKALAKTTPGA"
     gene            complement(1977..2753)
                     /locus_tag="VGA78_04120"
     CDS             complement(1977..2753)
                     /locus_tag="VGA78_04120"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX9893081.1"
                     /translation="MRTLLLALAPLVAAEAQTVDFGKARIIDLSHPLDERTLYWPTSP
                     TRFRLERLAYGPTPAGYFYAANSFSAPEHGGTHLDAPIHFFEGGATADAIDLRRLIAP
                     AVVIDLRRQAAADPDYRLTVADIEAFEQLNGKIREGSIVLLRTGWSSRWPDARRYLGD
                     DTPGDASKLHFPSFGVDAARLLVEGRRIAALGADVASIDYGQSTDFMVHRIAAAAGAP
                     GLENLTNLDQLPPTGAVVIALPMKIGGGSGGPARVVALLQ"
     gene            2940..4097
                     /locus_tag="VGA78_04125"
     CDS             2940..4097
                     /locus_tag="VGA78_04125"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX9893082.1"
                     /translation="MSGVPTVSQPTLRPDQPLWRLVAEAIRAAPPTHRRGLAWSPLPI
                     VVALVTSVPDIIAGTNVLEIARLIGLILASAGYTVLLVAHVLHYISQSQPLVCGSLRA
                     RMQWPFASLKSQVPDRIFQALPVMALVSAALSTTAIGLYLPSFFARPITMIMVPLFGY
                     LLLLAFRTAVHTSRFLYSYAEQQAELAARAREEATEAQLSALQAQMNPHFLFNALNTV
                     ASLVRINPRTAETTVEHLSDVLRRTLARSSRTTGTVGEEIEYLKAYLAVEQQRFGDRL
                     AVEWAVTPEALPCRLPPLVLQPLVENALRHGLGARLEGGRLRISAARHNGRLELAVSD
                     DGAGLPSRVLEGTGLGNLRRRLSTLYGEAARLSLESSRPGTTVRLELPAGG"
     gene            4102..4854
                     /locus_tag="VGA78_04130"
     CDS             4102..4854
                     /locus_tag="VGA78_04130"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX9893083.1"
                     /translation="MRVLIVDDEPAARRRLHTMLEELDVEVAGEAANGLEALDRVTSL
                     RPDVLLLDIAMPEVDGFDVVRHLSDPRPLVVFQTAYDEHALEAFNHAALDYVVKPVRL
                     DRLKQALDRARARLATERAASVGGDVLSRLQAALPGAAKVRRPRLLVRDGTGRVLLPL
                     REIVRFVASDGVVAAVARGTSWTTDYTLTELEQRTGGSFVRANRADLVNVDHITRLEP
                     ETDGSALLSLSDKTRIRVSRRRAAEVRRLLEE"
     gene            4861..6192
                     /locus_tag="VGA78_04135"
     CDS             4861..6192
                     /locus_tag="VGA78_04135"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9893084.1"
                     /translation="MAPVPRAMMIAGLVAGLGTRLVAQATQTSDLQLATFDAAWRIVW
                     ETHFDTTFNGVDWKALRDEFRPRAVGAPRDSVQRLISAMLARLGQSHFSLIPAEVADE
                     STADRVRGNGTAGLEVRMVEGRVTVSKLEPGGAAEAAGIRTGWVVTAVDAHRIDSLLA
                     RLQARPSRNPVALRAVINVNGWLGGRPDSTLTLHFLDGTDQPVVRTIVRRADPSLPVK
                     WGHFPTFFARFASREVKVNGSRVGVIWFNNWLVPLVRQVDSAVDAYRGHDGVILDLRG
                     NTGGVGAMVGGLAGHFTDRADTLGVSRTRTSTLYFVANPRRATSDGRRVAPFAGPVAI
                     LTDELSGSASEIFAGGLQSLHRVRVFGDTSLGGVLPAIWDRLPNGDVLYHAFGEFVTA
                     TGERLEGRGVLPDQPITVTRADLLAGRDPVLDAAVRWIVSRRGTKNPGGTR"
     gene            6189..6935
                     /locus_tag="VGA78_04140"
     CDS             6189..6935
                     /locus_tag="VGA78_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893085.1"
                     /translation="MSIGRSCTLVGLFVLAAVPLAAQTGQPTGTQLHARHVEAMGGKA
                     ALQKQTARRVWAKFEVRAQGMTGPVEIAMAPPARMFTKTEIPGIGVSLSGYDGQTGWV
                     VNPAMGPMLIEGPALEQLKQQSDFYADLHPERYIASRQTSGEAEYDGKKCWSVTVKTT
                     TGESYSECYDKTTGLLLASVRKQATPMGEFETTTIYAEYKEFDGVKIPTLVKASAMGF
                     EQLITVDSVSTKPIPDSVFELPPAVKALKK"
BASE COUNT         1140 a         2324 c         2415 g         1136 t
ORIGIN      
        1 tcgaacaggg cggtgaggtc agcgccggtc tggtctcggc gcccgcgtta ggccagcgct
       61 ggcacgccgc ccgcggcgcc ggtgcctgga gcggcgagcg acggctccgg gtatccgccg
      121 tccgcgactg ggatcgggcc caactgtttc acggcagcct gagcggcagc gaaggacggg
      181 agatgccggt cggcctgacc cgcttgatcc aacgcgcggg ccggagtcgg ggcttcggag
      241 atttctggca gcacaccctg gtggcagaag gaaccgggga agtggcggtg gacccccggg
      301 tggccccctg ggacatcgcg gcactgcaag tgatcgtgga agaagccggc ggcatggcca
      361 ccacactgga cggacgacgg tcgatctacg gcggcagcct cgtgaccagc aacggggtgc
      421 tgcatcagga ggcgcttgcg gtgctgcaac agcattgacg attgacaatt gacgattgac
      481 gattgatatg ggagcccctc ctagagcaat cgtcaatcgt caatcgtcaa tgttggttca
      541 tgcccccggt gtggtcttcg cgagtgcctt caccagccgg aaccagaact cggccgcatc
      601 gtggaatgct ttgacgccta cgcgttcgtc acggccgtgg gctcgaacgt cgtcgatccg
      661 ctcgaagatg gcactcagtc cgtacaccgg gattccggcg ttccgcacgt acaggccgtc
      721 cgtcgcgccg gtcgacattt cggggatgac ggcggcccca ggccacatct gtttcactaa
      781 ccgttccacg ggtcccatga tatcgggccg aagccgtgat gccgggctgg cggtcggctc
      841 accggcacgg gagacgtgaa cggccgtgtc ggccagcacc cgccccagct cggcctggac
      901 tcgctcgggc ggatcatccg gcagcatgcg gcagttgacc agcgcgccgg cgagctgcgg
      961 cagggcgttg tcggcgtgcc cggccagcag ccgagtggct acgcaggtgg tgcgcatcac
     1021 tgagttgtaa tagggcacga cggacaggcg tttggcggcc gcgggatcgc cgcttcggac
     1081 cacggcccgc atgtcggccc cgatctgggc cggttgggtg ggggcgagct gctcgaacaa
     1141 cgcgcgggtg gtctcgttga gacgaaccgg gaactcgtgc cgggagagtc gcgccagcgc
     1201 ctcactcaag cggtagatcg cgttgtcggg ctcgggtaat gaactgtggc cgcccttgtt
     1261 ccgcacttcg agattgaagc tgagatacac cttctccgcg gtctgtaccc cgaaccccgt
     1321 cggttttcca tccttgagct cgcccccgcc ggcatcggtg ttgagcgcga actccgcgtc
     1381 caccagatcc cgccgctggg tgaccagcca ccgaatgctc tcgcccgcgg tttcctcgtc
     1441 ggcggtgagc accatgatga ggtcacgatc gggaacaaag ccttcgccct tgaggcgaat
     1501 gaagttcgcg accagcatgg cgcagccggc cttgttgtcg ctggtgccgc ggccgtagta
     1561 gtagccctcc tgctcccgga actggtaggg atcgaaggac cagtcctccc gccgagcatc
     1621 caccacatcg aggtgggcca tgagcaggat gggccgcccg cctcgcccgc tgccgcgata
     1681 ccgggcgacc aggttctggt agcgaggatc gtggccgagg atctgcacgt cggctgccgg
     1741 gaacccagcc tcggtgagcc ggcgggccat ggcctcggcg gcttcgcggg tccgccccgc
     1801 ggaatcgctg gtgttgatgt tgatcagctc ggcgaagatc tcccgctcga gctgccggtg
     1861 agcatcagcc tgtgccagca ccggagcagc atcactgagc gcggccaggg tcaataagga
     1921 gaggaatcgc atggccgaaa cctagtcgcc tggttacgaa cactcagtac tcagtactac
     1981 tgaagcagcg ccaccactcg cgccggcccg cccgacccgc ccccaatctt catcggcagc
     2041 gcgatcacca ccgcgccggt cggcggaagc tggtccaggt tggtgaggtt ctcgagcccg
     2101 ggagcgccgg ccgctgccgc aatccggtga accatgaagt cggtcgactg gccgtagtcg
     2161 atggacgcga cgtccgctcc cagcgccgcg atccgccgtc cctctaccag caatcgggcc
     2221 gcatccacac cgaagctcgg gaaatgcagc ttggacgcgt ctcccggcgt gtcgtcgccc
     2281 aggtaccgcc gggcatcggg ccaccgggag ctccagccgg tgcggaggag cacaatgctc
     2341 ccctcgcgaa tcttgccgtt cagctgctcg aaggcttcga tgtccgctac cgtcagccga
     2401 tagtccggat cggccgcggc ctgacgcctc aggtcgatca ccacagccgg cgcgatcagg
     2461 cgccgcaggt cgatggcatc cgcggtggcg ccgccctcga agaagtgaat cggagcgtcg
     2521 agatgggtgc cgccgtgttc gggtgccgag aagctgttgg ccgcgtagaa gtagccggcc
     2581 ggggtcggcc cgtaggccag ccgctccagc cggaaccggg taggggaagt gggccagtag
     2641 agggtccgtt cgtccagcgg gtgggaaagg tcgatgatcc tggcctttcc gaagtcaacg
     2701 gtttgcgctt ccgcggcaac caacggagcc agggccagaa gcagggtcct catagactcc
     2761 tccgggcggg cctgagggcc agtttggacc agcagattac accgatgaag cagattcaaa
     2821 cagctgcacc ggtgtcgcga ggaggttgaa agccgaaaag acaccaccca accacgccct
     2881 accgccgctc agagccagcc ccgtagctgc aaaggccggg acccccgaga tttcgcctca
     2941 tgagtggtgt acccactgtc tcccagccaa ccctccgccc cgaccagccc ctgtggcgac
     3001 tcgtggccga ggccatccgg gcagctccgc cgactcaccg gcggggactg gcatggagtc
     3061 cgctgccgat cgtcgtggcg ctggtcactt cggtgccgga tatcatcgct ggtaccaacg
     3121 tgctcgagat cgcccggctg atcggactga tcctggccag cgcggggtat accgtgttgc
     3181 tggtggcgca cgtgctccac tacatcagtc aaagccagcc gctggtgtgc ggctcgctca
     3241 gggccaggat gcagtggccc tttgcctcgc tcaagtctca agtgccggac cggatcttcc
     3301 aggcgctgcc ggtcatggcg ctggtatcag ccgcactgtc gaccaccgcc atcggtctgt
     3361 atctgccttc gttctttgcc cgcccgatca ccatgatcat ggtgccgctg ttcgggtacc
     3421 tgctgctgct ggcttttcgc accgcggtgc acaccagccg gttcttgtac agctatgctg
     3481 aacagcaggc cgaattggcg gcccgcgccc gggaagaagc gaccgaggcc cagctctcgg
     3541 cgctgcaggc gcagatgaat ccccacttcc tgttcaacgc gctgaacacc gtggcctcgc
     3601 tggtgcggat caatccgcgc accgcggaaa cgaccgtcga gcacctctcg gacgtcctcc
     3661 ggcgcaccct ggcgcgatcg tcccgaacca ccgggacggt gggggaagag atcgaatacc
     3721 tgaaggcata cctggcggtg gagcagcagc ggttcggcga ccggctggcg gtggaatggg
     3781 ccgtcacgcc cgaggcgctt ccctgccggc tgccgccgct ggtgttgcag ccgctggtgg
     3841 aaaatgcctt gcgccacggc ctgggtgcgc gcctggaggg cggccgtctc cggatcagcg
     3901 cggcccgaca taacggccgg ctggagctgg cggtcagcga cgatggcgcc ggcctcccat
     3961 cccgggtgct cgaaggcacc gggctgggca acctgcggcg ccggctgtcg actctctatg
     4021 gcgaagccgc ccggctgtcg ctggaatcct cccgacccgg gaccacggtc cggctcgagt
     4081 tgccggcggg tgggtaacct gatgcgagtg ctcatcgtcg acgacgagcc ggccgcccgc
     4141 cgcagacttc acaccatgct ggaggagctg gatgtggagg tggcgggcga ggcggccaac
     4201 ggcctcgagg ccctcgatcg ggtcacctcg cttcgccccg atgtgctgct gctcgatatc
     4261 gcgatgccgg aggtcgacgg ctttgacgtg gtacggcacc tgtccgaccc gcgcccgttg
     4321 gtggtgttcc agaccgccta cgacgagcac gcgctggagg cattcaatca tgccgcgctc
     4381 gactatgtgg tgaagccggt ccggctcgac cggctcaagc aggcgctcga tcgggcccgc
     4441 gcgagactcg ccaccgaacg ggccgccagc gtgggcgggg atgtgctgtc gcggctgcag
     4501 gcggcgctgc ccggggccgc gaaggttcgc cggccccgct tgctggtccg ggacgggacc
     4561 ggccgggtgc tgctgccgct gcgggagatc gtgcgtttcg tggcgagcga tggggtcgtt
     4621 gcggccgtcg cccgcgggac cagctggacc acggactaca ccctgacgga gctggaacaa
     4681 cgcaccgggg ggagcttcgt gcgggccaac cgggccgact tggtgaacgt cgaccacatc
     4741 acgcggctcg aacccgaaac cgacggttcg gcgctgctca gcttgagcga caagacccgg
     4801 atccgggtca gccggcgacg cgccgccgag gtgcggcgcc tactggagga gtagaccacg
     4861 atggctccgg ttccgcgcgc gatgatgatc gccggtctgg tggccggcct gggcacccgg
     4921 ctggtggcgc aggcgacgca aaccagcgac ctccagctcg ccactttcga tgcggcctgg
     4981 cgcatcgtgt gggagaccca cttcgacacc accttcaacg gggtcgactg gaaggcgttg
     5041 cgcgacgagt tccggccccg ggccgtgggc gccccccgcg atagcgtgca gcgcctgatc
     5101 agcgccatgc tggctcgtct gggacagtcg cacttctccc tcatccccgc cgaggtggcg
     5161 gacgaatcca ccgcggaccg ggttcgagga aacggcaccg ccggtctcga ggtacggatg
     5221 gtggaaggcc gggtcacggt gtcgaagctg gagcccggcg gggcggcgga ggcggccggg
     5281 atccggaccg ggtgggtagt caccgcggtg gatgctcacc ggatcgactc gttgctggcg
     5341 cgactgcagg cccggcccag ccgcaacccg gtggccctgc gggcggtgat caacgtaaac
     5401 ggctggctgg gaggccggcc cgactcgacg ctgacactcc acttcctcga tgggaccgat
     5461 cagccagtgg tgcggaccat agtacgccgg gccgatccca gtctgccggt caaatggggg
     5521 cacttcccta ctttcttcgc ccgcttcgcc agccgggagg tgaaggtcaa cggctcccgg
     5581 gtgggggtga tatggttcaa caactggctg gtgcccctgg tgcggcaggt cgattcggcg
     5641 gtcgacgcct atcgcgggca tgacggcgtc atcctggacc tgcgcggcaa taccggcgga
     5701 gtgggcgcca tggtgggcgg gctggcgggt cacttcaccg accgtgccga cacgctgggt
     5761 gtgagccgga cccgcaccag caccctgtac tttgtagcca acccaagacg cgcgaccagt
     5821 gacggccgcc gggttgctcc cttcgcgggc ccggtcgcca tcctgaccga cgagttgagc
     5881 gggagcgcct cggagatctt tgccgggggc ctgcagtcgc tccaccgggt tcgcgtgttc
     5941 ggcgacacct cgctcggcgg agtccttccc gccatctggg accgtctgcc gaacggcgat
     6001 gtgctgtacc acgcgtttgg cgagttcgtc accgccaccg gcgagcggct ggaaggccgc
     6061 ggcgtgctgc cggaccaacc gattactgtt acccgcgccg acttgctggc gggccgcgac
     6121 cccgtgctgg acgcggcggt tcgctggatc gtctcgcggc gcggcaccaa aaaccctgga
     6181 ggcactcgat gagtatcgga agaagctgca ccctggtggg cctgttcgtc ctcgcggccg
     6241 tcccgctggc cgcccagacc gggcagccga ccggcaccca gcttcacgcc cgccacgtcg
     6301 aagcgatggg cggcaaggcc gcgctgcaga agcagaccgc gcggagggtc tgggccaagt
     6361 ttgaagtacg ggcccagggc atgaccggac cggtcgagat cgccatggcc ccacccgccc
     6421 ggatgttcac caagaccgag atccccggca tcggggtcag cctctcgggg tacgacggcc
     6481 agaccggctg ggtggtgaat cctgcgatgg gccccatgct gatcgagggc ccggcgctgg
     6541 agcagctcaa gcagcagtcc gacttctacg ccgacctcca ccccgagcgc tacatcgcgt
     6601 cgcgccagac ctccggcgaa gccgagtacg acggcaagaa gtgctggtcg gtgacggtca
     6661 agaccacgac cggggagagc tacagcgagt gctacgacaa gaccacgggg ctgctgctgg
     6721 cctcggtccg gaaacaggcg acgcccatgg gcgagttcga gacgaccacg atctacgccg
     6781 agtacaagga gttcgatggc gtgaagatcc cgactctggt caaggccagc gccatgggct
     6841 tcgagcagtt gattacggtg gactcggtgt cgaccaagcc gattccggat tcggtgtttg
     6901 agctgccgcc ggcggtgaaa gcgctgaaaa aatagtcgaa gcagtcgaag gggtcgaagg
     6961 agtcgaaggc ggtaagggca cgatggaccg tctcttgccc cgcttcgact ccttc
//
LOCUS       DASWKS010000134         3121 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2650762, whole genome shotgun sequence.
ACCESSION   DASWKS010000134 DASWKS010000000
VERSION     DASWKS010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2650762"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1604
                     /locus_tag="VGA78_04145"
     CDS             66..1604
                     /locus_tag="VGA78_04145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893086.1"
                     /translation="MKYWRGHPRIRQSLGCLLIALTPGCTSWKTVNKPVPECLAEDKP
                     DRVRVTFAATGEILELKKPGLVTDSLVGMDSARTRTAVPLAAIKSMAVRRTSAGKTVL
                     LIGGVTVLLASAAAAAAAIALSNSDMGFSCSESSCPWIYAWDGTAWQLESGTFGGAIT
                     RGAARTDLDNLEFAVPRRNSLRLKLANQLNETDHVDEVTVLAVDHGPGLTILPTPDGI
                     PISVLAPLPPVRARDFRGADALPAIRSSDGWAWETNPTGRDPTRLEDLRDGLELTFVR
                     PAGAIRAKLVVEARNTPWAALMLERFLALHGPGLDAWYDSLDANPDMRREVLGRLAEE
                     GFLQVSVWRDGSWRRQGAVWEVGPELNKRQVLVLDLRGIEGPELRVRLASAPSFWSIE
                     SVGLDYSDDVSMTIRRLAPLRAIDHAGNNVVASLAARDDSMLTLNQGEWAELEYRVPE
                     PPFARVRTWMVETSGWYRIHLRPARVARSELLQLINTDRLMGAKLSTTWMNQTIRALD
                     EPEF"
     gene            1632..2804
                     /locus_tag="VGA78_04150"
     CDS             1632..2804
                     /locus_tag="VGA78_04150"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX9893087.1"
                     /translation="MNPVCRVLTTASLCLLACTDAIGPPTAPGPDLAADQANPATSIV
                     VFSRNLYVGANLDAVLAALVTPDPADDFPALLAALETLGATDFAVRAQAIADEIAQTR
                     PMVIGLQEVSRLEVDLTPFGVSIAFTIDFEPILYAALADRGLDYDVAAQNTNIDLDAL
                     PGPAVMALRDKEVLLVRADVSPVAAGNKSYDICLHPVPGSCPITIPYPVPISRGFVWA
                     RIVLDGVPWTFVSTHSESGNSADVAAIRAVEIGELVTAFGSAPGPVVMMGDFNDRPEA
                     DPWPSPDAYDLITGAGGFTDFWRAKHPGATGFTCCHAPDLTNPLGTALDERIDFVFVR
                     GGPGHAFGSIRRSGATPSSRIAGPVYPIWPSDHAGLAAELLLPSEGGSAHGAQERP"
     gene            complement(2789..>3121)
                     /locus_tag="VGA78_04155"
     CDS             complement(2789..>3121)
                     /locus_tag="VGA78_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893088.1"
                     /translation="PHVRHWHKYLSARLPPSANFFFRTSRGPTGAVAGNVAEFHHELE
                     RAPGEVIAHHLGSGDFSRWLELTLQDRALARTVRQIESALREGSLPSLETAREQLVGV
                     VEDRYGRS"
BASE COUNT          514 a         1057 c         1015 g          535 t
ORIGIN      
        1 agagctttgg cgggcgatgc gccgcgatgg tcctggcgcc cgtctgatcg agaaggagtt
       61 tccccatgaa gtactggcgc ggtcatcccc gaattcgtca gagcctgggt tgcctgctca
      121 tcgcgctgac gcctggatgc accagttgga agaccgtgaa caaaccggtt ccagagtgcc
      181 tggccgagga caagcccgac cgggtccggg tgaccttcgc cgccaccggc gagatactcg
      241 agctcaagaa gcccggcctg gtgaccgaca gtctggtcgg gatggattcc gccaggacca
      301 ggacggccgt cccgttggcg gccatcaaat cgatggcggt tcggcgaacc agcgcgggga
      361 agaccgtcct cctcatcggc ggagttacgg tcctgctggc ttccgcggcg gccgccgctg
      421 cggcgatcgc cctctccaac tctgacatgg gcttctcgtg cagtgaatcc tcctgcccct
      481 ggatctacgc ctgggatgga acggcgtggc agctcgagtc gggaaccttc ggcggagcca
      541 ttacccgtgg ggcggcaagg accgatctcg acaatctcga attcgccgta cctcgtcgta
      601 acagcctccg cctcaaactg gccaaccagc tcaacgaaac tgatcacgtc gacgaggtga
      661 cggtgctggc ggtagatcat ggccccgggc tgaccatcct gccgaccccg gacggcatcc
      721 cgatttcggt cctggcgccg ctgccaccgg tccgcgccag ggactttcgc ggcgccgacg
      781 cattgccggc tattcgaagt tcggatggat gggcctggga aacgaacccc accggccgcg
      841 acccaacccg actggaagat ctgagagacg gactcgagct gacattcgtg cgcccggccg
      901 gggcgatcag agccaagctg gtggtcgaag cgcgaaacac gccctgggcg gcgctgatgc
      961 tggagcgctt tctggccctt cacggtcccg ggctcgacgc ctggtacgac tcactcgacg
     1021 ccaaccccga catgcggcgc gaggtcctgg gacggctggc ggaggaggga ttcctccagg
     1081 tcagcgtctg gcgagacggc tcgtggcggc ggcagggagc tgtctgggag gtcggaccgg
     1141 agctcaacaa acggcaggtc ctggtgctgg acctgcgcgg catcgagggg ccggaactgc
     1201 gggtgcgatt ggcgtctgcc ccctcattct ggtcaatcga gtcggtcgga ctggattatt
     1261 cggacgacgt gtccatgacc atccgccgat tggcaccgct tcgcgccatc gatcacgccg
     1321 ggaacaacgt ggtcgcatcc cttgcggcgc gggacgacag catgttgacg ctcaaccagg
     1381 gcgaatgggc ggagctcgaa tatcgggttc cggagccgcc ctttgcccgg gtccggacct
     1441 ggatggtgga gacatcgggc tggtatcgca tccacctccg gccggcgcgg gtggcccgaa
     1501 gcgagcttct gcaactcatc aataccgacc gtctgatggg agcgaagctg tcgaccacct
     1561 ggatgaatca gaccatccgg gcgcttgatg aacccgaatt ctgaggtgcc actctgccct
     1621 ctggaggcga catgaatccc gtctgccgag tattgaccac ggcgtcgctg tgtctgctgg
     1681 cctgcaccga cgctatcgga cctcccacgg ctcccgggcc ggatctggcc gccgaccagg
     1741 cgaatccggc gacatcgatc gtggtattca gccgcaatct ctacgtcgga gccaacctgg
     1801 atgccgtact ggccgcgctg gtcacccccg accccgccga cgacttcccc gccctcctgg
     1861 cggcgctcga gaccctgggc gcgaccgact tcgccgtccg ggcccaggcg atcgccgatg
     1921 agatcgcgca gacacgcccc atggtgattg gtctccagga agtctcccgg ctggaggtgg
     1981 atctcacgcc gttcggagtc tccatcgcct tcaccatcga tttcgagccg attctctatg
     2041 cggccctggc tgaccgcggc ctcgactatg atgtggcggc acagaacacg aatatcgacc
     2101 tggatgctct ccccgggccg gctgtcatgg cgctccggga caaggaggtg cttctggtcc
     2161 gggccgatgt cagcccggtg gcggcgggaa acaagagcta cgacatctgc ctgcaccccg
     2221 ttcccggatc ctgtcccatc accatcccct acccggtgcc catctctcgc gggtttgtct
     2281 gggcccggat cgttcttgac ggagtaccct ggaccttcgt cagcacccac tcggaatcgg
     2341 gaaattcggc cgacgtcgcc gcgatccggg cggttgagat cggcgagctg gtaaccgcct
     2401 tcggctccgc acccgggccg gtcgtcatga tgggcgattt caatgaccgc cccgaagcag
     2461 acccgtggcc gtcaccggac gcctacgatc tgatcacggg cgcgggcgga tttaccgact
     2521 tctggcgggc caagcacccg ggggccaccg ggttcacctg ttgccacgct cccgacctga
     2581 ccaacccact cgggactgcg ctcgacgagc ggatcgattt cgtgttcgtt cgcggggggc
     2641 ccggtcacgc gttcggctcg atccggcgct cgggcgcgac cccttcaagc cggatcgccg
     2701 gaccggtcta cccgatctgg ccatcggacc acgccggcct ggcggccgag ctgctgctgc
     2761 cttcagaggg agggtcggcc catggggctc aggagcggcc gtaacgatcc tcgaccacgc
     2821 cgaccagttg ctcccgggcc gtttccaggc tcgggagcga cccctcccgg agggcggact
     2881 cgatctgcct aacggtccgc gccagagccc tatcctgcag ggtcagctcc agccagcgcg
     2941 agaaatcccc gctaccgaga tggtgggcga tgacctcgcc cggcgcccgc tcgagctcat
     3001 ggtggaactc cgccacgttc cccgccacag ccccggtcgg cccgcgtgag gtccggaaga
     3061 agaagttcgc cgaaggcgga aggcgggcgg acaggtactt gtgccagtga cgaacgtggg
     3121 g
//
LOCUS       DASWKS010000135         3255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2288691, whole genome shotgun sequence.
ACCESSION   DASWKS010000135 DASWKS010000000
VERSION     DASWKS010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2288691"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1256)
                     /locus_tag="VGA78_04160"
     CDS             complement(<1..1256)
                     /locus_tag="VGA78_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEX9893089.1"
                     /translation="MAPRSSKPPGSWSGLSKNLALATLLALFVTFLWQMMGRQRSTTT
                     ELTYTEFTRQLDAGNITSVEVFDGRLLKGEFRVPVARENASAKSFTLLIPFPNSEKLE
                     ERLTTAGVQVTGREAKSGFITFFLAALPWLVILGLWFFLLRQLQAGGNRAFSFGKSKA
                     KLLTGDTPKITFADVAGCDEAKVELQEIIEFLKDPQKFTRLGGRLPKGALLVGPPGTG
                     KTLLAKAVAGEAGRPFFSMSGSDFVEMFVGVGASRVRDLFDQGKAHAPCIIFIDEIDA
                     VGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILVAATNRPDVLDPALLRPGRF
                     DRQIVVDSPDVKGREGILRVHTRKIPLAPDVRLDILAKGTPGLNGADLANLVNEAAVL
                     AARKNKVLVEMNDFDEAKDKVMLGVER"
     gene            complement(1258..1815)
                     /gene="hpt"
                     /locus_tag="VGA78_04165"
     CDS             complement(1258..1815)
                     /gene="hpt"
                     /locus_tag="VGA78_04165"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEX9893090.1"
                     /translation="MLTAPNEVLQRTGGRPVSSIVYDEQTIAGRVQELGAAITEYYPD
                     GDLLVLGLLKGSFIFLSDLVRQIRRPLQIDFLVASSYGAQKISSGSVKLLYDPETRLE
                     GKHIMLVEDVIDTGTTLRRLLSLLSARSPRSLSVCALLDKGIMTERPSEIRFIGFQAP
                     KAFLVGYGLDHAEDFRHLPFIADLS"
     gene            complement(2335..>3255)
                     /gene="tilS"
                     /locus_tag="VGA78_04170"
     CDS             complement(2335..>3255)
                     /gene="tilS"
                     /locus_tag="VGA78_04170"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:NF023162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX9893091.1"
                     /translation="LGGSGPAGLAGMNGVTGVLVRPLLPFGRAEIRDWLATQGVVAWE
                     DPANVDPRHLRSWLRTRLMPLITGRIPDVDRRVERLARLARQNRAAWDATLDALPLDL
                     RTDQRSVSLLIAPLTRWPAPLALMVLQAVARRAGLVLGPVAAQRVLRLVRDGQSGQRS
                     DIGRGVIAERAFDRLILGPDEPPAVWEAFIQGDRGQAPVDRWRCRWQSDPAPERHSRA
                     SWIAWLTPGWYRVRPWQAGDRILPLGGTGRRLVVRCMQDARVPRSERSGWPVVVLGQE
                     VVWVPGIMRSAQALPEPGVLALLVEFSRVP"
BASE COUNT          591 a         1128 c         1041 g          495 t
ORIGIN      
        1 cgctccaccc cgagcatcac cttgtccttg gcctcgtcga agtcgttcat ctcgaccagg
       61 actttgttct tccgggccgc gaggacggcg gcctcgttca ccagattggc gaggtccgca
      121 ccgttcagac ccggcgtccc cttggccaga atatcgagcc gcacatcggg cgcgagcggg
      181 attttccggg tatgcacccg gagaatgccc tcgcggccct tcacgtcggg tgaatcgacc
      241 acgatctggc gatcaaaccg gccgggccgg agcagcgccg ggtcgagcac atcgggacga
      301 ttggtggcgg cgaccaggat cacgccctcg ttggactcga agccgtccat ctccaccagc
      361 agctggttga gcgtctgctc ccgttcgtcg tggcccccgc ccagtccggc accgcggtgc
      421 cggcccacgg cgtcgatctc gtcgatgaag atgatgcagg gggcgtgggc cttgccctgg
      481 tcgaacaggt cccgcacccg agacgcgccg acccccacga acatctccac gaagtcggag
      541 cccgacatcg agaagaaggg ccgaccggcc tcgcctgcca cggccttggc caggagggtc
      601 ttccccgttc ccggcggtcc gaccagcagc gcgcccttgg gcagtcgtcc acccagccgg
      661 gtgaacttct gcgggtcctt gaggaactcg atgatctcct gcagctccac cttggcctcg
      721 tcgcagccgg ccacgtcggc gaaggtgatc ttgggggtat cacccgtgag cagcttcgcc
      781 ttcgatttgc cgaagctgaa ggcccgattg ccacctgcct gcagctgtcg cagcaggaag
      841 aaccagaggc ccaggatcac cagccagggc agggccgcca ggaagaaggt gatgaagccg
      901 ctcttggctt cccggcccgt cacctgcact cccgccgtgg tgagccgctc ttccagcttc
      961 tcgctgttgg ggaacgggat cagcagggtg aacgacttgg ccgaggcgtt ctcgcgagcc
     1021 accggcacgc ggaactcgcc cttgagcagg cggccgtcga acacctcgac cgacgtgatg
     1081 ttgccggcgt ccagctgccg ggtaaactcg gtatacgtca gctccgtcgt agtgctgcgc
     1141 tggcggccca tcatctgcca cagaaaggtg acgaacaggg ccagcagcgt ggccagcgcg
     1201 aggttcttgc tcaggccgga ccagctaccg gggggtttgg aggaacgagg ggccatctca
     1261 actcagatcc gcaataaaag ggagatgccg gaagtcctcc gcgtggtcga ggccgtaccc
     1321 cacgaggaat gccttcggcg cctgaaaccc gataaaccgg atctcagagg gtcgctcggt
     1381 cataatgccc ttgtcgagaa gggcgcacac gctgagcgac cgcggcgagc gcgcgctgag
     1441 cagcgacagc aaccgacgca gggtggtgcc tgtgtcgatg acgtcctcca ccagcatgat
     1501 gtgtttgccc tcgagccggg tttccgggtc gtagagcagc ttgacggatc cggatgagat
     1561 tttctgcgcc ccatacgaag acgccaccag gaaatcgatt tgcaacgggc gtcggatctg
     1621 ccgtaccagg tcgctcagaa atatgaaact ccccttgagc agacccagga ccagcagatc
     1681 accgtcggga tagtactccg tgatcgccgc gcccagctcc tgcacccgcc cggcgatggt
     1741 ctgctcgtca tacacgatcg agctgaccgg ccggccgccg gttcgctgga gcacctcatt
     1801 gggtgcggtc aacatggatg ctaggcctcc cattggggct gccgccaagg caggtcgggc
     1861 gaaagctcga ccgcttgcct cggccagaaa cggtgaatga taacgcccga aggtgagccg
     1921 aagcaaaaac gaggccttcg aggccttaca gatgagacga ccgcaccggc ggggctggca
     1981 cggctggccc gccgccctcc ggcaccaccg gctctcgccc agtcgctggc agggtcatcc
     2041 gccgatgccg ccgattacaa ccaacaacat ggccggttgc gagccccttc ggtttgccac
     2101 gtccttgggg gtgatggcgc cgatgcctcc aatcccgcgt ataccgacga caagaaaaac
     2161 aatcaggcgg ttggggggct aaatccgcgg catctgcggc atctgcggat aggccatgca
     2221 ggtggcgccg atgcctccaa tcccgcgtat accgacgaca agaaaaaaca accaggcggt
     2281 taggggggta aatccgcggc atctgcggca tctgcggata ggcatgcagt tccctcaagg
     2341 aactcgcgaa aactcgacca ggagcgcgag tacccccggt tcgggcaggg cctgagccga
     2401 tcgcatgatt cccgggaccc agacgacctc ctggcccagg actaccaccg gccagcccga
     2461 ccgctcgctc cggggaaccc gcgcgtcctg catgcaacgc actaccagcc gccgtccggt
     2521 gccgcctaac ggcaggatcc gatcacccgc ctgccacggc ctgacccgat accagccggg
     2581 cgtgagccag gcgatccagg aagcgcggct gtgccgctcc ggggccgggt cgctttgcca
     2641 gcggcagcgc catcggtcga ctggagcctg gccccgatca ccctggatga acgcttccca
     2701 gacggccggc ggttcatccg gacccagaat cagccggtcg aaggcgcgct ccgcgatcac
     2761 gccgcgcccg atatcggagc gctgaccact ctggccgtcg cgaaccagtc gcagcacccg
     2821 ttgcgccgcc accggcccga gcaccaggcc ggctcgccga gccacggcct gcagcaccat
     2881 caaggccagg ggcgcgggcc accgggtcaa cggcgcgatc agcagggaca ccgagcgctg
     2941 atcggtgcgg aggtccagcg gcagcgcgtc cagggtcgcg tcccacgccg cgcggttctg
     3001 ccgggccagg cgggccagcc gctcgactcg gcggtccaca tcgggaatac gaccggtaat
     3061 gagcggcatg agccgggttc gcaaccacga tcggaggtgg cgcgggtcca cgttggcggg
     3121 atcctcccac gcgaccacgc cctgggtggc aagccagtct cggatctcgg cacggccaaa
     3181 cggcagcagc gggcgcacca gcacccccgt cactccgttc atgcccgcca gaccggcggg
     3241 cccgctcccg cccag
//
LOCUS       DASWKS010000136         2580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3026315, whole genome shotgun sequence.
ACCESSION   DASWKS010000136 DASWKS010000000
VERSION     DASWKS010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3026315"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VGA78_04175"
     CDS             <1..645
                     /locus_tag="VGA78_04175"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX9893092.1"
                     /translation="MDVIVGQKTLNTQTPVFAEHMRYVIFRPYWNVPPGILKSEVLPA
                     ITEDPEYLQKNDMEIVQGQGDDAKPVALNPENLDLLERGQLRVRQRPGPRNSLGLVKF
                     MFPNDENVYLHSTPAQELFSRTRRDFSHGCVRVERPIDLAEWVLGGLPEWDRERIMEA
                     MQEGKPTRVNLPQPLPVVLFYTTAIVGVDGSLLFFEDIYGHDDKLLQALGTRLQ"
     gene            645..1514
                     /locus_tag="VGA78_04180"
     CDS             645..1514
                     /locus_tag="VGA78_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893093.1"
                     /translation="MGRPRIGFVTAEHCPELTSDDRLAAEALEARGASVTAVVWTRQP
                     RPPVDALVVRSAWDYHQRAGEFAQWLADLEREDVKVWNPVPVLRWNMDKRYLRDLEQA
                     GIPAAATEWVEPDSPPLAELLQSCDWDDVVVKPAISASGWRTFRSNRARAGADEAAFR
                     EALTGGLVLVQPFVPQIAHEGEWSLIYLGGRFSHAALKQPSPGGFLVQPQHGGSIEPA
                     IPTATMVQDAERALAAAPGSTLYARVDGARQGRHLILMELELLEPQLFFEFRPQAAQE
                     FAEVLLKSLSAGG"
     gene            1545..2492
                     /locus_tag="VGA78_04185"
     CDS             1545..2492
                     /locus_tag="VGA78_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893094.1"
                     /translation="MRARCWPLYLSLLAAPALHGQSASYNWTRAVEPGRGAPPAQWAE
                     GQWPMVVHPVMGLGDKLWMVDSSSVWSSADAVNWERVATRLPWRARQGMAIAFFDGKL
                     WALGGLEGTRLRNDIWFSTDGIQWRNASEKASWSPRRDHRVVVHNRRVWLIGGNDSYE
                     VNDVWYSRNGVDWIRGTDGAAWPPRPLPTVLVHDDRLWVIGGGSRIPKNDVWYSTDGK
                     LWTEATGNAAWPPRTSQGGASYDGKLWILGGAVRGGVWTNDVWFSADGKSWEKTPEPP
                     WSFRSGEFNVVFDRKLWLFGGRQRDGFANDVWYMDQAAR"
BASE COUNT          438 a          819 c          912 g          411 t
ORIGIN      
        1 atggacgtca tcgtgggaca gaagaccctc aacacccaga cgccagtctt tgcggagcac
       61 atgcgctacg tgattttccg gccctactgg aacgttccgc ccggcatcct caagagcgaa
      121 gtcctgcccg ccatcacgga ggaccccgag tatctccaga agaacgacat ggagatcgtg
      181 cagggtcagg gcgacgacgc caagccggtc gcgctcaacc ccgagaacct ggatctgctg
      241 gagcggggcc agctccgggt ccgccagcgg cccgggccgc gcaactcgct cggcctggtg
      301 aagttcatgt tcccgaacga cgagaacgtg tacctccaca gcaccccggc gcaggaattg
      361 ttcagccgga cccggcgtga cttcagccac ggctgtgtgc gggtggaacg gcccatcgat
      421 ctggccgagt gggtgctcgg cggccttccg gaatgggatc gcgagcggat catggaagcc
      481 atgcaggaag gcaaacccac ccgggtgaac ctgccgcagc cgctgccggt ggttctgttc
      541 tacaccaccg cgatcgtggg ggtggacggc tcgctcctct tcttcgaaga catctacggt
      601 cacgacgaca agttgctgca ggcgctcggt acccgactgc agtaatgggg cgacctcgca
      661 tcggattcgt caccgccgag cactgccccg agctgaccag cgacgatcgc ctggcggcgg
      721 aggcgctcga agcgcgcggc gccagcgtga ccgcggtggt gtggacccgc caaccgaggc
      781 ccccggtgga tgcgttggtg gtgcgttccg cctgggatta tcaccagcgg gccggtgaat
      841 tcgcccagtg gctggcggac ctggagcggg aggacgtcaa ggtctggaat ccggtgccgg
      901 tgctgcgctg gaacatggac aagcgctacc tccgggacct ggagcaggcc ggtatccccg
      961 ccgcggccac cgagtgggtc gaaccggact cgcctcccct ggccgagctg ctccagtcct
     1021 gcgattggga tgacgtggtg gtgaagccgg cgatctcggc cagcggctgg cggaccttcc
     1081 gttccaatcg cgcccgggcc ggagcggacg aagccgcctt tcgagaggcc ctgaccggcg
     1141 gactggtgct ggtgcagccg ttcgttcccc agatcgcgca cgaaggcgag tggtcgctga
     1201 tctacctggg tggccggttc agtcacgccg cgctcaagca gccgtcgccc ggtggcttcc
     1261 tggtgcagcc ccagcatggc gggagcatcg agcccgcgat ccccacagcc actatggtgc
     1321 aggacgccga gcgggccctg gccgcggcgc cgggctcgac cctgtacgct cgggtggatg
     1381 gcgcgcggca aggccgacac ctgatcctga tggagttgga gctgctcgag ccgcaattgt
     1441 tcttcgagtt ccggccccag gcggcccagg aattcgccga ggtcttgctg aaatcgcttt
     1501 cggcgggcgg ctgacaaacg ggagcagcgc atacactatt aggcatgcgc gcacgctgtt
     1561 ggccgcttta cctgagcctg ctggccgcac ccgcgctcca cggccagtcc gccagctaca
     1621 actggacccg cgcggtcgag cccgggcgag gcgcgccgcc ggcccaatgg gccgagggcc
     1681 aatggcccat ggtggttcat cccgtgatgg ggttggggga caagctctgg atggtcgaca
     1741 gcagctcggt ctggtcgtcc gccgatgccg tcaactggga gcgggtggct acccggcttc
     1801 cctggcgggc ccgtcagggc atggcgatcg ccttcttcga cggaaaactc tgggctctgg
     1861 gcggcctgga aggaacccgg ctccggaacg atatctggtt cagcaccgat ggcatccagt
     1921 ggcgcaacgc ttcggagaaa gcgtcctggt ctccccggcg cgatcaccgg gtagtggtcc
     1981 acaaccgccg tgtgtggttg atcggcggca acgacagcta cgaggtgaac gacgtctggt
     2041 acagccggaa cggagtcgac tggatccggg gcaccgacgg cgcggcctgg ccaccccggc
     2101 ccctgccgac agtactggtg cacgatgacc gactctgggt gatcggcggg ggcagccgga
     2161 ttcccaagaa tgacgtctgg tactcgaccg acgggaaact ctggaccgag gccaccggca
     2221 acgccgcctg gccgccccgc acctcgcagg gcggcgccag ttacgacggc aaactgtgga
     2281 ttctcggcgg ggcggtgcgc ggcggggtat ggaccaacga cgtctggttc tcagccgacg
     2341 ggaagagctg ggaaaagacc ccggagccgc cctggagctt tcggagcggt gaattcaacg
     2401 tggtgttcga ccggaagctg tggctgttcg ggggacggca gcgggacggt ttcgcgaacg
     2461 acgtgtggta tatggatcag gcggcgcgct aacgcgcgcc gctggtcgaa gggggtcgaa
     2521 ggggtcgaag gcggtcgaaa acggggtcga atacagtcga aggcggtcga ggggagtcga
//
LOCUS       DASWKS010000137         3984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2290520, whole genome shotgun sequence.
ACCESSION   DASWKS010000137 DASWKS010000000
VERSION     DASWKS010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3984
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2290520"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VGA78_04190"
     CDS             complement(<1..466)
                     /locus_tag="VGA78_04190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M28"
                     /protein_id="HEX9893095.1"
                     /translation="MKGLRLALVWSTLGAPLVAQTLPTDDPVIQRIWDEGMSRSQAMK
                     LMQVLTDSIGPRLSGSPGIKRGNDWLVATYQQWGVTARNEQYGTWVGWRRGITHIDLM
                     QPRVRSLEGTLLAWSGGTGGKPVDGSTVILPDVPDSNGFNAWLPSAKGKYVLT"
     gene            complement(685..1716)
                     /locus_tag="VGA78_04195"
     CDS             complement(685..1716)
                     /locus_tag="VGA78_04195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893096.1"
                     /translation="MILALAAACRDAAGPEDPVRPYRMGFSAFPPGDNQTLALQALEL
                     WSTRADAAIMHMSIPWAGLLQGFTPEQALEQNGIGLANYFQAKHLPLTVMLDVTDGLN
                     RSAEAPELVAMGRSITEPAVQQLYRQYARAVVQRLQPEYLGLAAETNLIRVAAPAPIY
                     GAIVTMVNAAADELQALGTGTKLYISVQVETAWGGLQGTNQFEGVERDFEDFPFIEAL
                     GLSSYPYLGGWTDPDQLPDDYYARLRGSRTIPLLVVEGGWASESAPGFTSSPALQADY
                     FRRQAALAESSGLIRWFQLTFTDLDLSGFPGLPPIAVLFARLGLVDAQLRPKPALAVW
                     DSVFAFGSQ"
     gene            complement(1816..2478)
                     /locus_tag="VGA78_04200"
     CDS             complement(1816..2478)
                     /locus_tag="VGA78_04200"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9893097.1"
                     /translation="MIRLVDIERFYQHGQGRTYVLRRITGEIREGEFVTVMGPSGAGK
                     TTLLSLLGMLDHGWSGEYWLLDQAVHRLNPRQRADLNRQYIGFVFQQYHLIDDLTVAE
                     NLEAPLSYRNYSKHERQAMVADTLDRFQIVGKKDLFPNQLSGGQQQLVGVARAVIAKP
                     KLILADEPTGNLHSDQAREIMELFRRLNQQGATIIQVTHSEENAKFGHRIIRLKDGWV
                     VD"
     gene            complement(2475..>3984)
                     /locus_tag="VGA78_04205"
     CDS             complement(2475..>3984)
                     /locus_tag="VGA78_04205"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX9893098.1"
                     /translation="PERERQDGLAGALLEANPLGRRLVYRQAKAMVLKKTSGHYPAPL
                     AAIEAVAAGLEHGMEEGLRVEREKFGQLAAGEVARNLIQIFFATTALKKDDGVARGTP
                     ARPVRRLGVVGSGFMGAGIAGTAVAQASVEVRLKDADLPRVGKGLKAAVGVLDGRLKR
                     RRITRYEYERLVALLSGTGEWSGFRRTDLVIEAVFEDVDVKRGVMAELEAAVGADTVI
                     ATNTSTIPIQQIASGMRHAERFLGMHFFSPVDRMPLLEVIPGPSTAPTAIATAVQFGR
                     KMGKTVIVVADRPGFWVNRILSPYMNEAGLLLDEGTPVEALDRAITRFGFPVGPVTLL
                     DEVGLDVAVKAGGVMYAAFGDRFKPSHAVQAMVSDGRLGRKNGRGFFLYEDGKKGAVD
                     ESAYSVIGVKPLAGIDELSVRHRLVYIMLNEAALALGEGVVKTPRDGDIGAIFGIGYP
                     PFRGGPLRTIDALGPDQVVKTLEELARTHGSRFAPCDPLVELARSGRRYYPA"
BASE COUNT          700 a         1338 c         1270 g          676 t
ORIGIN      
        1 aggtcaagac gtactttcct ttggccgagg gcagccaggc gttgaacccg ttcgagtccg
       61 gaacgtcggg aaggatgacc gtggacccgt ctaccggttt gcccccggtg ccgccgctcc
      121 aggccagcaa ggtcccttcc agggatcgta ccctcggctg catcaggtcg atgtgcgtga
      181 tcccccggcg ccagcccacc caggtgccgt actgctcgtt gcgggcggtg actccccatt
      241 gctggtaggt cgcgaccagc cagtcattgc cccgcttgat cccgggcgac cccgacagcc
      301 gcggaccaat cgaatcggtc aggacctgca tcagcttcat ggcctgggag cgactcatcc
      361 cctcgtccca gatccgctgg atgacgggat catcggtggg cagcgtctgc gcaacgagcg
      421 gggcgccaag ggtagaccac acgagcgcaa gtctcaggcc cttcatgccg atctccgatg
      481 ttcggggtgt tcatccggag attacgcgga tgacgccgat gatgttgaag cgcactctcc
      541 agcaagcgaa ccactaccac gatgcaatct tacaaagaca aacgacagtg tggtcgacct
      601 gtcggcgaca tctgcgttat ccgcggataa gaaatgccgg aaccctgata tcgggaatgg
      661 attgcgtgaa accggtggac cggcttattg cgatccgaac gcgaaaaccg aatcccagac
      721 cgcgagggcc ggcttgggac ggagctgggc atcgaccagc cccaggcgcg cgaacaggac
      781 cgcgatgggc ggcagaccgg gaaatcccga cagatcaaga tcggtgaagg tcagctgaaa
      841 ccagcgaatc aacccggacg actcggccag cgcagcctgg cggcgaaagt agtccgcctg
      901 gagtgcgggc gacgaggtga agcccggcgc cgactccgac gcccagccac cctctaccac
      961 gagcagggga atggtgcggc ttcccctgag ccgggcgtaa tagtcatccg gcagctgatc
     1021 cgggtcggtc caccccccga ggtagggata ggaggagagt cccagggcct cgatgaaggg
     1081 gaagtcttcg aaatcccgtt ccacaccctc gaactggttg gtcccctgca gcccacccca
     1141 cgccgtctcg acctggacgc tgatatagag cttggtcccg gtcccgagcg cctggagctc
     1201 atcggcggcc gcattcacca tcgtcacgat cgcgccgtag atcggcgccg gcgcggccac
     1261 ccggatcagg ttggtctcgg cggcgaggcc caggtattcg ggttggaggc gctggaccac
     1321 ggcccgggca tactggcggt agagttgctg caccgccggt tcggtgatgc ttcgccccat
     1381 cgccaccagc tccggtgcct cggcgctccg attgaggccg tcggtcacat ccagcatcac
     1441 cgtgagcggg aggtgcttcg cctggaagta attagcgagc ccgatcccat tctgttccag
     1501 cgcctgttcg ggggtgaacc cctgcagcag accagcccag gggatgctca tgtgcatgat
     1561 ggccgcgtcg gctctggtgc tccacagctc gagggcctgc agcgccagcg tctggttgtc
     1621 gccggggggg aaggcgctga atcccatccg ataggggcga acggggtcct ccgggccggc
     1681 tgcatcgcga caggcggctg ccagggccag gatcaataac cagtgacgat tgacaagtga
     1741 caattgcttc acgccaggta ctcggaaggc tggattaagt aatgggcaat tgtcaatcga
     1801 caatcgtcaa tggagtcagt ccaccaccca cccgtccttc agccggatga tccgatgccc
     1861 gaacttggcg ttctcctcgg agtgggtgac ctgaatgatg gtggcaccct gctggttcag
     1921 ccggcggaac agttccatga tctcccgcgc ctgatcgctg tggagattgc cggtgggctc
     1981 gtccgccagg atcagcttgg gtttggcgat cacggcgcgg gctacaccga ccagctgttg
     2041 ctggccgccc gagagttgat tggggaacag gtccttcttg cccacgatct ggaaccggtc
     2101 cagcgtgtcg gctaccatcg cctgccgctc gtgcttggag taattccggt agctgagcgg
     2161 ggcctcgaga ttctcggcca cggtgagatc atcgatcagg tggtactgct ggaatacgaa
     2221 gccgatgtac tgccggttga gatcggcccg ctgccggggg ttgagccggt gcaccgcctg
     2281 atccagcagc caatactctc cgctccagcc atgatccagc atgccgagca atgagagcag
     2341 cgtggtcttg ccggcgcccg agggtcccat gacggtgacg aactcaccct cgcggatctc
     2401 ccccgtgatg cggcgcagca cgtaggtgcg gccctgcccg tgctgataga agcgttcgat
     2461 gtcgacgagg cggatcatgc cggataataa cggcggccgc tgcgggcgag ctccaccagc
     2521 gggtcgcacg gcgcaaagcg gctcccgtgg gtccgcgcca gctcctccag ggtcttgacc
     2581 acctggtccg ggcccagtgc atcgatggtg cggagcggtc ccccgcgaaa aggcgggtag
     2641 ccgatgccga agatggcgcc gatatcgccg tcgcgcgggg tcttgaccac cccttcgccc
     2701 agggccaggg ccgcttcgtt cagcatgatg tacaccagcc ggtgccgcac gctcaactcg
     2761 tcgatcccgg cgagcggctt cacgccgatc acgctgtagg ccgattcgtc caccgccccc
     2821 ttcttgccgt cctcatagag gaaaaagccg cggccgttct tgcggcccag ccggccgtcg
     2881 gacaccatcg cctggacggc atgggagggt ttgaaccggt ccccgaatgc ggcatacatg
     2941 accccgccgg ccttcaccgc cacatccagc cccacttcat cgagcaaggt caccggtccc
     3001 accggaaacc cgaagcgcgt gatggcccgg tcgagggcct cgaccggcgt cccctcatcg
     3061 agcaggagac cggcctcgtt catgtagggc gagaggatcc ggttcaccca gaagcccggc
     3121 cggtcggcta ccacgatgac ggtctttccc atcttgcgcc cgaattgcac cgcggtggcg
     3181 atggccgtgg gagcggtcga cggaccgggg atcacttcca gcaacggcat ccgatccacc
     3241 ggcgagaaga aatgcatacc gaggaagcgt tcagcgtgcc gcatgccgga cgcgatctgc
     3301 tggatcggaa tggtcgaggt gttggtggcg atgacggtgt cggccccgac cgcggcttcg
     3361 agctcggcca tgacgccgcg tttgacatcg acatcttcga acaccgcttc gatcaccagg
     3421 tcggtccggc ggaagccgga ccactccccg gtgcccgaca ggagcgccac cagtcgctcg
     3481 tactcgtaac gcgtgatacg gcgccgcttg agacgaccgt ccagcacccc gaccgccgcc
     3541 ttgagcccct ttcccacccg gggcagatcg gcatccttga gccggacttc caccgacgcc
     3601 tgcgccaccg cggtgcccgc gatgccggcg cccatgaagc cgctgccgac cacccccagg
     3661 cggcgcaccg gccgggccgg cgtaccgcgg gcgaccccgt cgtccttctt gagcgcggtg
     3721 gtcgcgaaga agatctggat cagattgcgg gccacctctc cggccgcgag ctgaccgaac
     3781 ttctcgcgct ctacccgcag cccttcctcc atgccgtgct ccagtcccgc agccaccgcc
     3841 tcgattgcgg ccagcggggc cggatagtgg ccgctggtct tcttgagcac catggccttg
     3901 gcctggcgat acaccagccg ccgtcccagc ggattggctt cgagcagcgc gccggccagc
     3961 ccatcctggc gttcccgctc gggc
//
LOCUS       DASWKS010000138         2287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_431501, whole genome shotgun sequence.
ACCESSION   DASWKS010000138 DASWKS010000000
VERSION     DASWKS010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431501"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1378)
                     /locus_tag="VGA78_04210"
     CDS             complement(<1..1378)
                     /locus_tag="VGA78_04210"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX9893099.1"
                     /translation="MRPILVLLGVVSLSYAAAPTQISAQSWLEYSGSVDAQYDFTCTV
                     PEGAAPIPRATGPFAFYFGNGTITSQGGFGSGRIAADGSASGGSGPSFTWWGRFLRGS
                     DGSIQGAGSISPEAGAIGCSGTWTAGAAAAPSTEPAVCAEYQARIRSLKDEIYGLIRS
                     YSVIHGIEEARDQVQKTNREITNIKTGTLTGGNLEQLQARRREAYAQIKQLEAVVDHI
                     RTLWLEVRRLRSEFVKAGCGDAPATAVRTAGSGIIDDLLNLETSPPPPSTIGVAGIRG
                     IVDVEFGGAFHPRSKGPLRDGTPLPLDQPVTIRTGPGSAVTIQVGSVRKTVGPMTTIR
                     IMPGSNGQPDFIEQGTATVDVQKPGANKIQTPAASANVDGTIFTVSHDPATGITGIMV
                     YEGRVSVRPENSALRGVTLGPGEYVQVSLNAVSAVLPAPGAPATASPAANPQTNPPAG
                     QSVSPQGRD"
     gene            1511..2287
                     /locus_tag="VGA78_04215"
                     /pseudo
     CDS             1511..2287
                     /locus_tag="VGA78_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941629.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          399 a          749 c          732 g          407 t
ORIGIN      
        1 ggtcgcggcc ctggggagag accgactgac cggccggagg attggtttgc gggttagctg
       61 ccgggctggc cgtcgccgga gcaccgggtg cggggagcac cgccgagacg gcgttgaggc
      121 tcacctggac gtactccccg ggcccgagcg tcactccgcg cagcgcggaa ttctccggcc
      181 gcacgctgac ccgtccttca tacaccatga tgccggtaat ccccgtcgcc gggtcgtgtg
      241 atacggtgaa gatcgtgcca tccacgttgg cgctggcggc gggggtctgg atcttgttgg
      301 cgcccggctt ctgcacatcg acggtggcgg tgccttgctc gatgaagtcc ggctggccgt
      361 tgctccccgg catgatccgg atggtcgtca tcggccccac cgtcttccgc accgagccca
      421 cttgaatggt gacggcggag cccggtccgg tccggatggt gaccggctgg tccagcggga
      481 gcggggtgcc gtcgcggagt ggacctttgc tgcgcgggtg aaaggctccc ccgaactcga
      541 cgtcgacaat gccgcgaatt ccggccacgc cgatggttga aggcggcgga ggagaggtct
      601 cgagattcag gaggtcatcg ataatgccgc ttccagcggt ccggactgcc gtggccggcg
      661 cgtctccaca accggccttg acgaattcgg accgtagccg ccgcacttca agccagaggg
      721 tgcgaatgtg atcgacgacg gcctcgagct gcttgatctg ggcataggcc tcgcggcgcc
      781 gcgcttgcag ttgctcgagg ttcccgccag tcagtgttcc ggtcttaatg ttggtgatct
      841 cgcgattggt tttctggacc tggtcccttg cttcctcgat accgtgaatg acgctgtaag
      901 aacggatcag gccgtagatc tcatctttga gacttcggat ccgcgcctga tactcggcgc
      961 agaccgccgg ttccgtcgag ggggcggccg cggcgccggc agtccaggtg ccggagcagc
     1021 cgattgcacc tgcctcgggg ctgattgacc cggcgccctg aatcgacccg tcactcccgc
     1081 gcaggaaccg gccccaccag gtaaagctcg gcccacttcc accgctggcg cttccatcgg
     1141 ccgcaatcct tccgctacca aatcccccct ggctcgtgat cgttccattc ccgaaataga
     1201 aagcgaaggg gccggttgcg cgtggaatgg gagcggcgcc ctcgggaact gtgcaggtaa
     1261 agtcgtactg agcgtcgacg ctaccgctgt actccagcca cgactgtgcg ctgatctgag
     1321 tcggtgccgc cgcgtaggac agagacacta cgcccagaag gacgagaatc ggtcgcattt
     1381 gcattgggag attgacccag gagagggaga tcactccatt caccttcaac ctaccccaga
     1441 aatcgacgcg gagcaagcga ttgtagctcg taaccttggt tgaattccta gccatatgtt
     1501 atccgttgac cgcgaagggc tcgtcgccgc cgtggagtgc atgttcacct ggtactggct
     1561 cgccgatctc tgcgccgccg aaggcatccg gttcgtcttg gggcacgccc tctatatgaa
     1621 agccatccac ggcggcaaag ccaagaacga ccggatcgat gcccacaaga tcgccgtcct
     1681 gctgcgcggc gggatgctcc ccgaggccta cgtctatcca gccgcgatgc gggccacccg
     1741 cgacctgctg cgccgccggc tccacttacc cgcaagcggg ccgagctgtt gacccacatc
     1801 gagaacacca acagccagta caacctcccg gccttctcga agaagctcac ctatgccacc
     1861 aaccgcacgg gggtcgtgga ccggttcgac gaggccagcg tgcagcagac catcgccgcc
     1921 gacctggact tgatcgccca ctacgacgaa ctgctccgcg aggtggagaa tttcatcttc
     1981 cgcaccgcga agggccacga tgcgaacgcg ctctaccggc tgcgcaccgt gccggggatc
     2041 ggcaagatcc tctcgctggt gatcctctac gagatccacg acatcacgcg cttcgcccgg
     2101 ccgcaggagc tggcctcgta tgcccggctg gtcaagtgcg ccaaagagtc cgccggcaag
     2161 gtccgcggga ctgggggcac gaagatcggc aacgcgcacg tgaagtgggc cttctccgaa
     2221 gcggccgtgg ggttcctccg gaagaacccg gcgggcaagg cctactacga gcggctggtg
     2281 cagaagc
//
LOCUS       DASWKS010000139         4394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_432854, whole genome shotgun sequence.
ACCESSION   DASWKS010000139 DASWKS010000000
VERSION     DASWKS010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4394
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432854"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VGA78_04220"
     CDS             <1..657
                     /locus_tag="VGA78_04220"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEX9893100.1"
                     /translation="ESPWAAWSVGAGFRLLSLGRADLGIEARYLHLGRPADALVLGLR
                     LAARFGGRSPSPPMPREPPPAPPEPTPSDSAPPLSAHRPSARPPVRPSAVVQTAVEVM
                     GSPYLWGGSGANGFDCSGLIQYAYGRHGVLLPRRSQDQAKAGLLVPRDLADLLPGDIL
                     TFSATPGGPVTHVGLYLGDRRFIHSASDGVRLSLLSPEDPNGRHWWARWVGARRILVL
                     "
     gene            792..1109
                     /locus_tag="VGA78_04225"
     CDS             792..1109
                     /locus_tag="VGA78_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003966899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEX9893101.1"
                     /translation="MATATKARPKVKIHPLEDRVVIMPDEETATMRGGLYIPDTAKEK
                     PTQGEVLAAGPGRIEKGERIKMELAVGDRVIYGKYSGTPFNLEDGTEVIIIKASDVLA
                     KIG"
     gene            1131..2762
                     /gene="groL"
                     /locus_tag="VGA78_04230"
     CDS             1131..2762
                     /gene="groL"
                     /locus_tag="VGA78_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683025.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX9893102.1"
                     /translation="MASKELHFDVDARAKLKRGIDTLAEAVRVTLGPKGRNVVIEKKF
                     GAPTVTKDGVTVAKEIELQDPVENMGAQMVKEVATKTSDLAGDGTTTATVLAQAIFRE
                     GLKNVTAGANPMELKRGIDRAVDAVVEDLKRLSVPTAGKKEIAQVGTISANNDPEIGK
                     LIAEAMEKVGKDGVITVEEAKGLETTLETVDGMQFDRGYLSPYFITDPEKMEAVMDDA
                     YILIHDKKISSMKDLLPVLEKTAQTGKPLLIVAEDVEGEALATLVVNKLRGTLKVTAV
                     KAPGFGDRRKEMLVDISKLTGGKVVSEEIGFKLENTTLADLGRAKRIVIDKDNTTIVD
                     GKGKEGDIKGRIAEIRVAIDKTTSDYDREKLQERLAKLAGGVAVINVGAATETEMKEK
                     KARVEDALHATRAAVEEGIVPGGGVALVRAQASLASVKGTEDEKIGVEIVRRALEEPI
                     RMIAQNAGAEGSIVVARVKESKDKNFGYNAQTDVYEDLVKAGVIDPTKVTRTALQNAA
                     SIAGLLLTTEAVVVERKEEKAAPSGPPGGGMGGMY"
     gene            3182..3583
                     /locus_tag="VGA78_04235"
     CDS             3182..3583
                     /locus_tag="VGA78_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893103.1"
                     /translation="MGAVLGALAGPSITGESVLSGAVGFALMYGTVGAIAGATTALLT
                     ARAETGRQLSHIPTWRLAVWGVVGGMAPAVLFGALAFFIGGAPVSELLPLLGLGLVSG
                     GVGGAISGSASAAAKRARLTESNTPPRVAAT"
     gene            3686..4381
                     /locus_tag="VGA78_04240"
     CDS             3686..4381
                     /locus_tag="VGA78_04240"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic peptidoglycan transglycosylase"
                     /protein_id="HEX9893104.1"
                     /translation="MLRFVLRGFARHVLAQEWQGIRSQIDRLAASGGAQPPLIAQQLL
                     VSGEDHRHGHHPGYDLIAILRAIWKRLLGKSREGGSTIEQQLVRVLTGHFERTIRRKL
                     KEIGLAALVAENYPKHLLPRMYLRIAYYGAHMNGYAQACRRLKLDPVSLSLEDAAMVV
                     ARLKYPQPHALPDSRRRQIQIRARHLISLRIHHLRDATYECLTTTARATTLSHAHLDE
                     AASGLLPDPITGP"
BASE COUNT          831 a         1361 c         1479 g          723 t
ORIGIN      
        1 gaaagcccct gggccgcgtg gtcggttggc gcgggattcc gactcctgtc gctgggccgg
       61 gccgatctcg gaatcgaagc ccgctatctc cacctcggtc gaccggcgga cgcgctcgtt
      121 ctggggcttc ggcttgcggc ccggttcggt ggaagatccc cgagcccgcc gatgccgcgg
      181 gaacccccgc cggctccgcc agagccaacg cccagcgata gtgcgccgcc cttgagtgcg
      241 caccgtccgt ccgcccgtcc gcccgtccga ccgtccgccg tagtccagac cgccgtcgaa
      301 gtgatgggat cgccctatct ctggggtggc agcggcgcca acggattcga ctgctccggg
      361 ctgattcagt atgcctatgg ccggcacggt gtgctgcttc cccggcggag ccaggaccag
      421 gccaaggcag gtctcctggt gccacgagat ctggcggacc tgcttccggg cgacatcctc
      481 accttctcgg ccaccccggg cggcccggtg acccacgtgg gcctctacct cggagaccgt
      541 cgcttcatcc acagcgcttc ggacggcgtc cgtctgagtc tgctcagccc cgaggacccc
      601 aacggccgcc actggtgggc ccgctgggtg ggagcgaggc gaatactagt gctgtagcac
      661 ccgaccgggg cttgactggc acccagaggt gcttagttta actggcagtt ctggcactcc
      721 catgctacga gtgctaacca tttgtaacaa aaccctttgt aaccttttca caatgccggt
      781 gaggtgcacc aatggctact gcgaccaagg ctaggccgaa ggtcaaaatt caccccctcg
      841 aggaccgggt cgtcatcatg ccggacgagg aaaccgccac catgcggggc ggcctctaca
      901 tccccgacac cgccaaggag aagcccactc agggtgaggt cctggcggca ggtccgggac
      961 ggatcgaaaa gggcgagcgg atcaagatgg agctcgcggt gggcgaccgg gtcatctacg
     1021 gcaagtacag cggtacgccg ttcaatctcg aggatggcac cgaggtcatc atcatcaagg
     1081 catcggacgt tctcgccaag atcggctgag ccaacacgga gagagacatc atggcttcga
     1141 aggaactgca ttttgacgtg gacgcccggg ccaagctcaa gaggggtatc gataccctgg
     1201 ccgaggcggt gcgggtcacg ctcgggccca agggccgcaa cgtggtcatc gagaagaagt
     1261 tcggcgcgcc gaccgtcacc aaggacggcg tgaccgtcgc caaggagatc gagctgcagg
     1321 acccggtcga gaacatgggc gcgcagatgg tgaaggaagt cgcgaccaag acctccgacc
     1381 tggcgggcga cggcaccacc accgccacgg tgctggccca ggccatcttc cgggaaggcc
     1441 tcaagaacgt caccgccggc gccaacccga tggagctcaa gcggggcatc gaccgggcgg
     1501 tcgacgcggt agtcgaggac ttgaagcggc tgtcggttcc cacggccggc aagaaggaga
     1561 tcgcgcaggt cggcaccatc tcggccaaca acgatcccga gatcggcaag ctgatcgccg
     1621 aggcgatgga gaaggtgggc aaggacggcg tgatcaccgt cgaagaggcc aagggtctcg
     1681 agaccacgct ggagacggtc gacggcatgc agttcgaccg gggctacctc tcgccctact
     1741 tcatcaccga tcccgagaag atggaagcgg tgatggacga cgcctacatc ctgatccacg
     1801 acaagaagat ttcgtcgatg aaggacctgc tcccggtgct ggagaagacc gcccagaccg
     1861 gcaagccgtt gctcatcgtc gccgaggacg tcgagggtga ggcgctggcc acgctggtgg
     1921 tgaacaagct gcgcggcacg ctcaaggtca ccgcggtcaa ggcgccgggc ttcggcgacc
     1981 gccgcaagga gatgctggtc gatatctcca agctgacggg tggcaaggtg gtctccgagg
     2041 aaatcggctt caagctggag aacaccaccc tggccgatct gggccgggcc aagcggatcg
     2101 tgatcgacaa ggacaacacc accatcgtcg acggcaaggg gaaagaaggc gacatcaagg
     2161 gccggatcgc cgagatccgg gtcgcgatcg acaagaccac cagcgactac gaccgggaga
     2221 agctgcagga gcggctggcc aagctcgcgg gcggcgtggc ggtgatcaac gttggggcgg
     2281 ccaccgagac cgagatgaag gagaagaagg cccgggtgga agacgcgctg catgcgacgc
     2341 gggccgcggt ggaggagggc atcgtgccgg gcggcggtgt cgcgctggtg cgggcccagg
     2401 cctcgctcgc gagtgtgaag ggcaccgagg acgagaagat cggcgtcgag atcgtgcggc
     2461 gcgcgctgga ggagcccatc cggatgatcg cccagaatgc gggcgccgag gggtccatcg
     2521 tggtggcccg ggtcaaggag tcgaaggaca agaacttcgg ctacaacgcc cagaccgatg
     2581 tctacgagga tctggtcaag gcgggcgtca tcgacccgac caaggtcacc cgcaccgcgc
     2641 tgcagaacgc ggcgtcgatc gcgggactgc tgctcaccac cgaagcggtg gtggtggagc
     2701 ggaaggaaga gaaggctgcg ccgtccggtc ctccaggtgg tggcatgggc gggatgtact
     2761 agaccagtcg gacagtcgga cagtcggaca gtcggtcggc aaacgccccg ggagagatcc
     2821 cggggcgctg tctttccagg tgtgcagccg ctggatcctg gctggggcct gggggaaggc
     2881 tgcattgccg gtaaagacta tccggcgggg cctttcgcgt atcatggcgg atcacgcagc
     2941 ctattccagg ggccgtgggc gtgcggggtt agtattactg ccagggatgc tgccttgccg
     3001 tcccgttcta caagggggac gcggcgtgga gtacatgttc tgggttcggc tcatgagcct
     3061 ccttcgcagc acaattagaa gttaggttgc cctcgaagac gggaggggta ccgtggcgtt
     3121 ctcgaagcag tttcgggccc ttgcgagaat cacaggcttt ttcgctggcg tgtgggcagc
     3181 ggtgggcgcg gttctcggag ccctcgcggg cccgtccatc accggggagt cggtcctctc
     3241 cggggcggtg ggctttgccc tgatgtatgg aaccgtgggc gcgattgccg gcgccaccac
     3301 cgcgttgctc acggcccgcg cggaaactgg ccggcagctc agccacatcc cgacctggcg
     3361 cctagcagtc tggggtgtag tcggagggat ggcaccagcc gtgttgttcg gagcccttgc
     3421 cttcttcatc gggggtgcgc cggtgagcga gctcctaccg ttgcttggac tcgggttggt
     3481 cagtggcggg gtcggaggag cgatctcggg gtcagcgtca gcagccgcta agcgggctcg
     3541 cctgaccgag agcaacacgc cgccgcgagt agcggcaacc taaccaacaa atgcggccgc
     3601 cgagcgcgct cacgttgcgc cttcggcgca agcgcgctcg cagctgattt gtggtcgtta
     3661 gaccgtttcg ccgaggttcg atgaaatgtt gcggtttgtg cttcggggct tcgcccgcca
     3721 cgttttggcc caggagtggc aaggcatacg tagtcagatc gatcgcttgg ccgccagtgg
     3781 cggcgcgcag cctccattaa tcgcacagca actgcttgtc tctggcgagg atcaccgtca
     3841 cggtcaccac cccggttacg acctgattgc catcctacgg gcgatttgga agcgcctgct
     3901 gggtaagtct cgggaaggtg gaagcacgat cgagcagcaa ctcgtgcgag tcctcactgg
     3961 acatttcgag cggacgatcc ggcgcaagct aaaagaaatt gggctcgcag ccttggtggc
     4021 cgagaactac cccaagcacc tgctcccgcg catgtatctg cgcattgcgt actacggggc
     4081 tcacatgaac ggctatgccc aggcgtgcag acggctcaag ctagacccgg tgtccctctc
     4141 ccttgaggac gcagccatgg tggtggcgcg attgaaatac ccacaacccc acgccttgcc
     4201 tgacagccgc cgacgtcaga tccagattcg tgcccggcac ctgatttctc tgcgcataca
     4261 ccacctacgc gacgccacat atgagtgcct caccacaacc gcgcgtgcta caaccctttc
     4321 gcacgcacat cttgatgaag cagcttcagg actcctaccc gaccccatca caggtccttg
     4381 agattctcag aaga
//
LOCUS       DASWKS010000140         6221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1547586, whole genome shotgun sequence.
ACCESSION   DASWKS010000140 DASWKS010000000
VERSION     DASWKS010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547586"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /gene="panB"
                     /locus_tag="VGA78_04245"
     CDS             complement(<1..733)
                     /gene="panB"
                     /locus_tag="VGA78_04245"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF001452.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEX9893105.1"
                     /translation="MTDSRKRVTTTDLLKMKRAGERIVMLTAYDALFAGLLDQAGIEV
                     LLVGDSVATVLGGEETTLTATLDQMIYHGRIVRRGTARALVVVDLPFLTYQVSVEEAL
                     RNAGRVMQQTGAGAVKLEGGQTVAPTVRALVDAGIPVMGHLGFTPQSVHALGGARVQG
                     KQSDAAERLLADAKALEEAGAFSLVLELIPAPLAQRVTQALSIPTIGIGAGPHCDGQV
                     LVLHDMLGLNQGFNPRFLKRYAELGR"
     gene            complement(730..951)
                     /locus_tag="VGA78_04250"
     CDS             complement(730..951)
                     /locus_tag="VGA78_04250"
                     /inference="COORDINATES: protein motif:HMM:NF024851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEX9893106.1"
                     /translation="MRKLLVSVDHTRCVGNGTCLTIASNVFAHNADRQSVVVNPTGDP
                     NDQILEAAETCPVSAITVRDAETGEELFP"
     gene            complement(1004..2224)
                     /locus_tag="VGA78_04255"
     CDS             complement(1004..2224)
                     /locus_tag="VGA78_04255"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9893107.1"
                     /translation="MTVLDLDDIFAPDAIADPHAWYARLREQDPVHWNERYQLWVITR
                     YDDIVWMIRHHELFSSAVIKNDPRPPYPPVDPADLPLFEPVRQFRSEMLVEQDRPEHL
                     AQRKVMRGFFTPKAMESWRPFIRNAVAELLDQVQPRGTMDVLTDLAAPLPVRIIVEMM
                     GVPPEDRDLLRHLADKLLYLNRSEPHRLQPLTEGIEGLLAYVTPKVEERLARPRHDFI
                     SVLARGETLGAFTRHQVLVNTALLLFAGHETTMNLICNGTLAFLRHPAQWSRFRSDPA
                     GLAEAATEECLRYDPPVKSTQRIAAQDVELRGKLIHKQDRIRWAISAANRDPAVFPDP
                     DGFDIARQPNPHVAFGAGVHHCLGATLARIEGQEVFRALAERLPGLRLESEALEYQPS
                     MQFRSLKALPVSWT"
     gene            complement(2315..3649)
                     /locus_tag="VGA78_04260"
     CDS             complement(2315..3649)
                     /locus_tag="VGA78_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9893108.1"
                     /translation="MTAELKRTLNAFDVSVIVVGAIIGSGIFLVPGTVLRHVDGSVGV
                     ALGVWVVGGVLSLLGALTYGELACMNPRSGGLYLYIRDAFGPMAAFAYGWTLFIVIGT
                     GTVAALAVAASTYFDQLVPVGTVGRNLIAVGMVAGLCAINVIGTRQSTRVLAAGTALK
                     VGALLFLIVALPLAGEGFSEVQSFWPDRWTPGVVIAAGTAMVSALWAYEAWQYATFIA
                     GEVLEPQRNFPRGILMGTVVVVFIYVLAAVAYVAGLGPAALAASAAPAADAMTQNFGA
                     RAGRLIAIPILVSIVSGAQAVILTNARVFYAMGKDGVFFRRMGEVHPRFGTPAFAIVA
                     MCTWAAVLALSGTFNTLLTYVIFVGWIFYGLGGMALFVFRRTQPDAPRPFRVPGYPVA
                     PLLFVVSAVWIVLNTVMTDPRKGLIGIGGALLSIPIYFLWRKPKRHVLSTED"
     gene            complement(3646..4935)
                     /locus_tag="VGA78_04265"
     CDS             complement(3646..4935)
                     /locus_tag="VGA78_04265"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9893109.1"
                     /translation="MSVTSTDQLVEDYRASHPGSAELHQRASDFFAARGATHFARVSA
                     PFRPYITHALDARKWDVDGNEYIDYVMGHGALILGHGHPAILEAVQQQLVRGVHFGDN
                     HALEVEWAGLIRGLMPAAERIEFFACGQEANLMGIRLGRLFTGRRQLLRFRWNYHGWA
                     DELAGPLAAGTVADQVTLIPPNDLDLLEEHLSRREYAVLLIEGGGGYLAGRVPIAAEF
                     YQALPELTRKYGTVLLLDEVVTGFREAPGGWQSVVGIEPDLTSIGKAVSGGLPAGGLL
                     GRAALFEALNPNNARDRLVVHGGTWNALPLTCAAGIAACRLYQDGSPQRAALKMAERL
                     KALGNDVLQRRGVTGRLYGRSAVHLGFGAEGQETSPETLQAHRRLDLHLLHRGVSTLL
                     GEVFVLSSAHSRADVDQTVSAFDQSIGAMLEEGTLCR"
     gene            5033..5938
                     /locus_tag="VGA78_04270"
     CDS             5033..5938
                     /locus_tag="VGA78_04270"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9893110.1"
                     /translation="MPDMPFAKAPPATLLQDAIEPVTLLGFTELEAMVYAFLVQHSPA
                     TGYKISRAIGKPIANTYKAIEALQRKGAVLVDETGNRMCRALPPEDLLERAERTFRQR
                     HQEAKRALSRIPKATHDDGIYGLSSTEQVYDRCRKMLTKAKEVAVLDLFPGPLAELKP
                     AILACARRGVRMAVQVYDPVTLAGVEVVRHGQADIVLQKWDGHWLNCVIDGAELLIAF
                     MAKDGETVHQAIWSRSPFLCSVFGSALGAELLASSLQRAVLEHWADEDVRETIVRFGR
                     FRAHELPAYRELTGRRSKNGKTRKR"
BASE COUNT         1100 a         2092 c         2055 g          974 t
ORIGIN      
        1 accgacccag ctcggcgtag cgcttcagga acctggggtt gaacccctgg ttgagtccca
       61 gcatgtcatg cagcaccagc acctgtccgt cgcaatgcgg gccggcgccg atcccgatgg
      121 tcggaatcga cagcgcttgg gtgacccgct gcgccagggg ggcgggaatg agctccagca
      181 ccagggaaaa agcgccggct tcttccagcg ccttggcatc ggccaggagg cgttcggccg
      241 catccgactg tttgccctgg acccgggctc cacccagcgc gtgcaccgat tggggcgtga
      301 atcccaaatg ccccatcacc gggatccccg cgtcgaccag ggcccgcacc gtgggcgcga
      361 ccgtctgccc cccttcgagt ttcaccgcgc ccgctccggt ctgctgcatc acccggccgg
      421 cgttcctgag tgcttcctcg accgacacct gataggtgag gaagggaagg tccaccacca
      481 ccagcgcccg cgcggtgcca cgccgcacga tccggccgtg gtagatcatc tggtccaggg
      541 tggccgtgag ggtggtctct tcaccgccca gcaccgtggc aaccgaatcg cccaccagca
      601 ggacctcgat ccccgcctga tccagcagcc cggcgaagag ggcatcgtag gccgtgagca
      661 tcacgatccg ctcccccgcc cgcttcatct tgaggaggtc ggtcgtggtt acgcgtttgc
      721 gggaatcagt cacggaaaca attcttcacc agtctcggca tctcgtaccg tgatcgcgct
      781 cacgggacag gtctcggcgg cttcgaggat ctggtcattc gggtcacccg tgggattgac
      841 gaccaccgac tgccgatcgg cattgtgggc aaacacgttg gacgcaatgg tgagacaggt
      901 gccgttaccg acacagcggg tgtgatcaac cgataccagc agtttccgca tggtgcctct
      961 ctcagtactc agtactcaga actcagtact cagtacgcag gactcatgtc cagctgaccg
     1021 gcaacgcctt aagcgagcgg aactgcatgc tgggctggta ttccagcgct tcgctctcca
     1081 gccgtagccc cggcagccgc tcggccagcg cgcgaaacac ctcctggccc tcgatccggg
     1141 ccagtgtggc gcccaggcaa tgatgcactc cggcgccaaa cgcgacgtgc gggttgggct
     1201 gccgcgcgat gtcgaaccca tccgggtcgg ggaacaccgc cggatcccgg ttggcggcgg
     1261 agatggccca gcggatccgg tcctgcttgt gaatcagctt gccgcggagc tccacatcct
     1321 gcgcggcgat ccgctgagtg gatttgaccg ggggatcgta cctcaggcac tcctccgtgg
     1381 ccgcctcggc caaccccgcc ggatcgctcc ggaatcggga ccactgcgcc gggtgcctca
     1441 ggaatgccag cgtcccgttg cagatcaggt tcatcgtggt ttcgtgtccg gcgaagagga
     1501 gcagagccgt gttcaccagc acctgatgcc gggtgaacgc gcccagcgtt tccccccggg
     1561 ccagcaccga gatgaagtcg tggcggggcc gagccagccg ctcctccacc ttgggtgtga
     1621 cgtaggccag cagaccctcg atcccctcgg tcaagggctg cagccggtgg ggctcactcc
     1681 ggttgagata gagcagcttg tcggccaggt ggcgcagcag gtcccggtct tccgggggca
     1741 cgcccatcat ctcgacgatg atccggaccg gcagcggggc cgccagatcg gtcaagacgt
     1801 ccatcgtgcc gcggggctgg acctggtcca gcagctcggc caccgcgttg cggatgaagg
     1861 gacgccagga ctccatggcc ttgggcgtaa agaatccccg catcaccttg cgctgcgcca
     1921 gatgctcggg ccggtcctgc tccaccagca tctcggagcg aaattgccgc accggctcga
     1981 atagcggcag atcggccggg tcgaccggag ggtagggcgg gcgcgggtcg ttcttgatga
     2041 ccgcggagga gaacagctcg tggtgccgga tcatccacac gatgtcgtcg tagcgggtga
     2101 tcacccagag ctggtagcgc tcgttccaat ggaccgggtc ctgctccctg agccgcgcgt
     2161 accacgcgtg cggatcagcg atcgcgtcgg gagcgaagat gtcgtccagg tcgagtacgg
     2221 tcatacgccg ctgggaagta ctagtagcag acagtactag tagatagaga ccccgtcaag
     2281 ttaccccggt ccctgaatgg accctactca gcactcagtc ctcagtactc agcacgtggc
     2341 gtttcggttt acgccagagg aagtagatcg ggatgctgag cagcgcgccc ccgatcccga
     2401 tgaggccctt cctcgggtcg gtcatcacgg tgttgagcac gatccagacc gcggacacca
     2461 cgaacaacaa cggggcgacc ggataccccg gcacccggaa cggccggggc gcgtcgggct
     2521 gggtccggcg gaacacgaac agcgccatcc cgcccaggcc atagaagatc cagcccacga
     2581 agatcacgta ggtcaggagc gtgttgaacg tgcccgagag cgccaggacc gcggcccacg
     2641 tgcacatcgc gacgatcgcg aaggccggcg tcccaaaccg gggatgcacc tcccccatgc
     2701 ggcggaagaa gacaccgtcc ttgcccatgg catagaacac ccgggcgttg gtcaggatga
     2761 ccgcctgggc gccgcttaca atgctcacca ggatcggaat ggcgatgagt cggccggccc
     2821 gggccccgaa gttctgggtc atcgcatcgg cggccggagc tgcggacgcc gcgagggccg
     2881 cggggcccag cccggccacg tacgcgaccg cggccaggac atagatgaac accaccacga
     2941 cggtgcccat caggatgccg cgcgggaaat tccgctgcgg ctccagcacc tcgcccgcga
     3001 tgaaggtggc gtattgccag gcctcgtagg cccagagggc cgagaccatg gcggtgccgg
     3061 cggcgatcac cacgccgggg gtccagcggt cgggccagaa cgactgcacc tcgctgaagc
     3121 cttctcccgc cagcggcagc gctacgatga gaaagagcag ggccccgacc ttgagcgcgg
     3181 tgccggccgc cagcactcgg gtactttgcc gggtcccgat cacgttgatg gcacagagtc
     3241 ccgccaccat ccccaccgcg atcagattgc gtccgacggt gcccaccggc accagttggt
     3301 cgaagtaggt ggatgcggcc acggccagcg cggccacggt cccggtcccg atcacgatga
     3361 agagggtcca gccataggcg aacgcggcca tcggcccgaa ggcgtcccgg atgtagagat
     3421 agagtccgcc ggagcggggg ttcatgcagg ccagctcgcc gtaggtgagc gcccccagca
     3481 gcgacagcac gccgcccacc acccagacgc ccagcgccac gccgaccgag ccgtccacgt
     3541 ggcgcagcac ggtgccgggg accaggaaga tccccgagcc gatgatggcg cccaccacga
     3601 tgacgctgac gtcgaacgcg ttcagcgtcc gtttgagctc ggccgtcatc ggcagagggt
     3661 cccttcctcc agcatggcgc cgatcgactg gtcgaacgcc gagacggtct ggtcgacatc
     3721 cgcccggctg tgagccgacg agagcacgaa gacctcgccc agcagcgtgg agacgccgcg
     3781 gtggaggaga tgcagatcca gccgtcggtg cgcctgcagc gtctcgggac tggtctcctg
     3841 gccctcggcg ccgaacccga gatgcaccgc gctccgccca tagagtcggc cggtgacgcc
     3901 ccggcgctgc agcacgtcgt ttccgagggc cttcaggcgc tccgccattt tcagcgcggc
     3961 gcgctgcggc gaaccgtcct ggtacagccg gcaggcggcg atgcccgcgg cacaggtgag
     4021 cgggagcgcg ttccaggtcc cgccgtgcac caccaggcga tctctggcgt tgttcgggtt
     4081 cagcgcctcg aagagtgcag cgcgacccaa caggccgcct gccgggaggc caccgctcac
     4141 cgcctttccg atggaggtga gatcgggctc gattcccacc accgactgcc acccacccgg
     4201 cgcttcccgg aagccggtca ccacctcatc gagcagcagg acggtgccgt acttccgggt
     4261 cagctccggc agcgcctgat agaactcggc cgcgatcggc acccggccgg ccaggtagcc
     4321 cccgccgcct tcgatcagca gcaccgcgta ctcgcggcgg ctgagatgct cttccagcag
     4381 atccagatcg ttgggcggga tcagcgtcac ctgatccgcg accgtgccgg ccgcgagggg
     4441 cccggccagc tcgtcggccc agccgtgata attccagcgg aaccgcagca gctggcggcg
     4501 gccggtgaag agccggccca accggatccc catcaggttg gcttcctggc cgcaagcgaa
     4561 gaactcgatc cgttccgccg ccggcatcag gccgcggatc agcccggccc actccacttc
     4621 cagggcgtgg ttgtcgccga agtgcacccc ccggaccagc tgctgctgga ccgcttcgag
     4681 gatggcggga tgaccgtggc ccaggatcaa ggccccgtgg cccatcacgt aatcgatgta
     4741 ttcattgccg tcgacatccc atttgcgggc atcgagcgcg tgcgtgatgt aggggcgaaa
     4801 tggggcgctg acccgggcga agtgggtggc gccccgggcc gcgaagaaat cgctggcccg
     4861 ttggtgcagc tccgcggacc ccggatgact ggctcgataa tcctcgacca gctgatcggt
     4921 actggtgacg ctcacggtgg gtccccggtc gggatcgcta ctaatagcac ccgctacgag
     4981 gagttgtcaa cgaactccag ggtacttgac gccgccccgg tcgcggtgtt ccatgcccga
     5041 tatgcctttt gccaaagctc cgcctgcgac gctgctgcag gacgcgatcg agccggtcac
     5101 gctgctcgga ttcaccgagc tggaggccat ggtatacgcc ttcctggtcc agcattcgcc
     5161 ggccacggga tacaagatct cgcgggccat cgggaagccg atcgccaaca cgtacaaggc
     5221 catcgaagcc ctgcagcgca agggcgccgt cctggtcgat gaaaccggca accggatgtg
     5281 ccgggcgctg ccgccggagg acctgctgga acgggccgag cggaccttcc ggcagcggca
     5341 ccaggaggcg aagcgggccc tcagccggat tcccaaggcg acccacgacg acgggatcta
     5401 tgggctcagc tccaccgagc aagtctacga tcgttgccgc aagatgctga ccaaggccaa
     5461 agaggtggcg gtgctcgatc tctttcccgg tccgctggcg gagctcaagc ccgccatcct
     5521 ggcctgcgcc cggcggggcg tgaggatggc ggtccaggtg tacgacccgg tgacgctggc
     5581 cggcgtcgag gtggttcgcc acggacaggc cgacatcgtg ctgcagaagt gggacggaca
     5641 ctggctcaac tgtgtaatcg acggggccga gctgctgatc gcgttcatgg cgaaggacgg
     5701 cgaaacggtg caccaggcca tctggtcgcg cagccccttt ctctgttccg tttttgggag
     5761 cgcgctgggc gcggagctgc tggcgtcgag cctccagcgg gcggtactgg agcactgggc
     5821 cgacgaagat gtgcgggaga ccattgtccg cttcggccgg tttcgggctc acgagctgcc
     5881 ggcctatcgg gagctgaccg gccgccgcag caagaatggg aagacccgca agcggtaagg
     5941 tatgcgacgc atggcgcgcc gatggagcag ccgcaggtgc cgggggtggg aaaggaaaag
     6001 gttgtcggtc atgtcctagt ctgagttttt catcagactc cgctctgtct ttcggcagag
     6061 ggtttcgggc atcaccgaca acctggtacc agattagtac cgccggctgg gtgggtcaat
     6121 atccgagttt ggacacgcac gatcatggga ggcggttcgc ctcgcaggca aggaactcct
     6181 gaaccaagac cacgaccatg ctactggcgc cgcatggagc a
//
LOCUS       DASWKS010000141         8554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3382649, whole genome shotgun sequence.
ACCESSION   DASWKS010000141 DASWKS010000000
VERSION     DASWKS010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3382649"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..2248)
                     /locus_tag="VGA78_04275"
     CDS             complement(239..2248)
                     /locus_tag="VGA78_04275"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9893111.1"
                     /translation="MRIPIARFQRCTRASVLFIAWTFVLATSGTSQTRRLELADLGRE
                     IGLSTPRMSPDGKQIVLVQSQINYQDNRFERTLVMVDVASGARRELTPGRRTVADPRW
                     SPSGDRIAFMANEEGKPVQLYLLPMAGGEARQVTDGKRAVEQYAWRPDGTAFAIVTEE
                     EPVEPTGEEKHNKSFEVGDNVYLAQTAPLPRRAWLVPADGSKPTRLPPSSGSVVELRW
                     VSQDQLLIVTKPRPHSGEPERTIAAYDAGAGTERVLARLKGSFGGGLRVSPDGRTLAW
                     AQPRGPEIGFRSRGMYLQPIAGGEARLVSGDLDRDVQSYSWLPDNSGVVLQAPDRTRI
                     GIWITPVGGAPRRLDWGALDPSSELDIGSDGSIAFVGRSPHGPPELYHTPSLEAAPRR
                     LTDLNAELAARELGRVETITWDGPDGFKENGVLIYPPGFTAGRKYPLVLSIHGGPMGT
                     STEGWSATSQLFAAQGWIVFLPNYRGSNNQGDAFQRAVINDAGDGPGRDVMAGVKAVK
                     ALGIVDDQRVAVSGWSYGGYMTAWLTAQYQGWRAAVAGAAVTDWFDWYNLADLNVYAG
                     LGLGGSPWLKDNAANYWRQSPMAYAHKIRTPTLILSTTGDPRVTVTQSYKLYHALKDN
                     GVPVQFIAYPVGGHFPPDPVHQRDVYRRWIAWIEEHFRQGAVAGK"
     gene            complement(2678..3406)
                     /locus_tag="VGA78_04280"
     CDS             complement(2678..3406)
                     /locus_tag="VGA78_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893112.1"
                     /translation="MNNRDNENAYLVKTPEAARDAVRQAVESGYDFVKVTFVTRPVYD
                     AVIDEARARGIRVVGHVDPDVGVARALETGEQLEHLDGYFEAVLADSSPIKESVTQYS
                     VYKDANWRSLDFIDDRKIGWIAGITAHAGAVIGPTLNVFNTAFAMGETDSALRNRPDW
                     QMWPAAIREPYLRARARYWGPASLEHRTEARRRRYVEVRNRLVKAIHDSGGTIIAGSD
                     TPEFFHTYGCGLHRELQAYVAADL"
     gene            complement(3734..4012)
                     /locus_tag="VGA78_04285"
     CDS             complement(3734..4012)
                     /locus_tag="VGA78_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893113.1"
                     /translation="MAVLQAGGLTVELAQHDDVVPLGTVHPAGGGAISVHGIFKVGLI
                     VDDFDKTLAALRVRGVGIAYDPYPKRSDQPANVMIRDNAGNFIQISGK"
     gene            complement(4083..6719)
                     /locus_tag="VGA78_04290"
     CDS             complement(4083..6719)
                     /locus_tag="VGA78_04290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9893114.1"
                     /translation="MKPPDLITRLLARLLPESERDAILGDLEEEYHSRRAGDGDRAAR
                     SWYRRQAVAALRMTFSPTSGHDLPPTSLFAMGDLLHEFRYALRQLRRRPLYAAIVIFT
                     LAVGIGATTAVLSVANPILFRPLPYPDSDRLVVLGEIELSGEFSTTMGWSTFADLRRD
                     VPSIESGAAISGWGPILSGETESEQLVGQSVSAEFFKLLGVTMLHGRDFAAAEDAPGQ
                     NRVVILGHGLWRRRFGSDPDVVSRSIRLGGNDYRVAGVLPPSFESLLNPMAQIWRPLA
                     YNDTLPQACRTCRHLGVVARLRAGPSLEETQAQLATVAARLKQDFSSQYAMTGIRAHR
                     LKDQLVQDVKPALLMMLGAGVFVLAIACANVGNLVLARTTEREAELTLRTALGAGHWR
                     LMQQLITESAVLCLAGAAAGLLLAKAGVAALIGLSPANLPRLDSIALDWRVTLITLAA
                     TLAVALLVGVVPGVMSLRRAAMPVTARSVTTGQRQRQVTGALVVAEVSLAFMLLSGAG
                     LLTRSLSRVLSVEPGFEPSNLLTMTVTASGPRYQSDTVVWQMQEQLLEALAAVPGVEA
                     AAFATQIPLGGNFDRYGVQIQDQPLANPEEAPSADRYTVSPRYLEAMRIPVRRGRGLT
                     EQDRGGAMPVALINETFAKLKWPGANPIGKRIQMGGPDTPWRTIVGVVGDVKHLGLDD
                     AQGPQFYVPATQWLWSENSVVVVLRTRGEPSSVTEPVRRAIGSVDPAIAVSDVASAQD
                     RIKVSTADRRLIVRLFEAFAGVALLLAAAGIYGLLSRRVAERHRELGIRTALGATRQR
                     ILGLVLRDGGRLAMLGVILGLAGALGVARLLEGLLFNIAPRDPVTLTLAAFSLGCVAL
                     LACLYPAFRATRVDPVEALRSE"
     gene            complement(6716..7042)
                     /locus_tag="VGA78_04295"
     CDS             complement(6716..7042)
                     /locus_tag="VGA78_04295"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9893115.1"
                     /translation="MGDGLGEFEQLVLLALVRLGDGAYGMIVHRELEQRARREVTLGA
                     VYKTLARLEAKGLVGAFTGEPTPERGGRRKRHYRVLPEGRRALARSLATIRRMSVGLP
                     EALELS"
     gene            7354..7566
                     /locus_tag="VGA78_04300"
     CDS             7354..7566
                     /locus_tag="VGA78_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HEX9893116.1"
                     /translation="MRTTGTVKWFNDAKGFGFITPEGGQKDCFVHHSAISGQGFKSLA
                     EGDRVEFDVVQGAKGPAAQNVVKLGR"
     gene            7761..8252
                     /locus_tag="VGA78_04305"
     CDS             7761..8252
                     /locus_tag="VGA78_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893117.1"
                     /translation="MNDQQVHAYHARRLLVAPPRKYRVQVGPSHRTLRILRELVNYGF
                     VIIYAALSARLLLLLLPGTVGHILTRMVSPLADPLAAPLVGVVPELVFLGDLAILPPV
                     AIALCAYALAHRGLSTVLQVLSRPRLGRPSALRQGSLLHSVGPTDRMQPVSFRAREPY
                     LAP"
     gene            8295..>8554
                     /locus_tag="VGA78_04310"
     CDS             8295..>8554
                     /locus_tag="VGA78_04310"
                     /inference="COORDINATES: protein motif:HMM:NF022963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3224 domain-containing protein"
                     /protein_id="HEX9893118.1"
                     /translation="MTRHATATFELTGWNEKPFDEGEVLPKITRASVTKKFQGDVEGE
                     SKVEYLMMYRDDGTATYVGLERISGQLAGKRGSFVLLHEGVF"
BASE COUNT         1449 a         2843 c         2821 g         1441 t
ORIGIN      
        1 ggttgcgggg ccgaccccga cccccaggga gatgaccgcc gtgagggtga aggccggccg
       61 gcggagcaga gcgcgagtga tggaggcgac gttgcgaaac ggcactggac cggctcgggg
      121 tgggttcgag gatttgacgc cttacaccag cgaagcgttg ctatcgcctg cccacacaga
      181 agccgcaggg gtcaccgagg ccgccgggag tgtacttcgc cgcggactta ccagatgctt
      241 acttgccggc caccgcgccc tggcggaagt gctcttcgat ccaggcgatc cagcgccggt
      301 agacgtcgcg ctggtgcacc gggtcgggcg ggaagtgccc ccccaccgga taagcgatga
      361 actggaccgg cacaccgttg tccttgagcg cgtgatagag cttgtaggac tgggtcacgg
      421 tgacccgcgg atcgccggtg gtggacagga tcagggtcgg ggtgcggatc ttgtgggcgt
      481 acgccatggg cgactggcgc cagtagttcg cggcattgtc tttgagccag ggagagccgc
      541 ccaggccgag ccccgcatac acattgagat cggccagatt gtaccagtcg aaccaatcgg
      601 tgaccgcggc gcccgccacc gcggcgcgcc acccttgata ctgcgcggtg agccaggcgg
      661 tcatgtagcc gccgtaggac cagcccgaca cggcgacccg ctggtcgtcg acgatgccta
      721 acgccttgac cgccttgacg cccgccatta cgtcccggcc ggggccatcg cccgcgtcgt
      781 tgatgacggc ccgctggaac gcgtcgccct gattgttgct gccgcggtaa ttgggcagga
      841 acacgatcca gccctgggcc gcgaacagct gactggtggc ggaccacccc tcggtggacg
      901 tgcccatcgg tcccccgtgg atcgagagca ccaggggata cttccggccg gccgtgaatc
      961 ccggcggata gatcaggacc ccgttttcct tgaagccatc gggaccatcc caggtaatcg
     1021 tctccacccg acccaactcg cgggcggcca gctcggcgtt gaggtcggtc agtcgccggg
     1081 gggcggcttc gagcgacggc gtgtgataga gctcgggcgg tccgtgcggc gagcgaccga
     1141 cgaatgcgat gctcccgtcg gatccgatgt cgagctcgga cgagggatcc agcgctcccc
     1201 agtcgagccg ccggggggcg ccgccgaccg gtgtgatcca gatgccgatc cgagtccgat
     1261 ccggcgcctg caagaccacg ccgctgttgt cggggagcca gctgtaactc tggacatcgc
     1321 ggtcgaggtc tcccgacacc aggcgggcct cacctccagc gatgggttgc aggtacatcc
     1381 cccgggagcg gaagccgatt tccggtcctc ggggctgcgc ccaggccagc gtccggccat
     1441 ccggggagac ccggagtcct ccaccgaacg agcccttgag acgggcaagc acccgctccg
     1501 tgccggcccc ggcgtcatac gcggcgatgg tccgctccgg ttcacccgag tgcggtctcg
     1561 gcttggtgac gatgagcaac tggtcctggc tgacccagcg caactccacc acgctgcccg
     1621 agctgggagg aagccgggtc ggtttgctgc catcggccgg aaccagccag gcgcgtctcg
     1681 gcagcggggc cgtttgcgcg aggtagacgt tgtctcccac ctcgaacgac ttattatgct
     1741 tttcctcgcc ggtgggttcg accggttctt cctcggtgac gatcgcgaac gccgtgccgt
     1801 cggggcgcca ggcatactgc tcgaccgcac gtttgccgtc ggtcacctgt ctggcttcgc
     1861 cgccggccat cggcaacagg tagagctgga ccggcttccc ttcctcgttg gccatgaacg
     1921 cgatgcgatc gccgctggga gaccatcgcg gatcagccac cgtgcgacga ccaggcgtga
     1981 gctcgcgccg agctcccgag gccacgtcga ccatgaccag ggtccgttcg aaacggttgt
     2041 cctggtaatt gatctggctc tgaaccagga cgatctgctt gccgtccggc gacatccggg
     2101 gtgtcgacag tccgatctcc cgccccagat cggcgagttc cagccgacgc gtctggctgg
     2161 tccccgaagt cgccaggacg aatgtccagg cgatgaatag gacgcttgct ctggtgcagc
     2221 gctggaaacg ggcgatggga attcgcatgg agacgatctc tcctcggctc gtgcgtgacg
     2281 gactcaggtc atggctggcc gcgagttcca acctagccct ggatgagtgg acggctagcc
     2341 ctggatgagt gaacggtcca ggaagccttg aggtgaagtg ctgcagcttc gctcaatcct
     2401 cctgaatgcg tccaccagta cggagggagg gtgcctagtc ggggcccacg acaactctac
     2461 ggccgcgcgc gatcatggca tcgagctctg ggcgcgtcaa tacccggcct cccaccacga
     2521 ccgcctcgat ccggcccgtg ttcctgatat cctcgagcgg gttggcgccc agcagtagca
     2581 ggtccgcgcg cttccccggc tcgatggtcc cccagtcggc ccttgccccc agataggcgg
     2641 cagggttcgt cgttgccgtt cgcagggcat caaacggtca caggtccgca gccacatacg
     2701 cctggagctc gcggtgcagc ccgcagccgt aggtgtgaaa gaactccggc gtatccgagc
     2761 cggcgatgat tgtcccgccg gaatcgtgga tcgcctttac cagtctattc cgtacctcca
     2821 cgtagcgccg gcggcgcgct tcggttcggt gttccagcga cgccggcccc cagtacctcg
     2881 cgcgggcccg gaggtacggc tcccgtatcg cggccggcca catctgccag tcagggcgat
     2941 tccgcagcgc cgagtcggtt tcgcccatgg cgaacgcggt gttgaagaca ttcagggtcg
     3001 gcccgatgac ggcgccggcg tgggcggtta tgcccgcgat ccagccgatc ttgcggtcgt
     3061 cgatgaagtc caggctccgc cagttcgcgt ccttgtagac cgagtactgc gtcaccgact
     3121 ccttaatggg cgacgaatcc gcgagcaccg cctcgaagta gccgtccagg tgctccagct
     3181 gctctcctgt ctcgagcgcg cgcgccaccc cgacgtccgg gtcgacgtga cccacgacgc
     3241 ggattccccg cgcccgcgct tcgtcgatca cggcgtcgta caccggccgc gtgacgaagg
     3301 tcaccttcac gaaatcgtat ccgctctcga cagcttggcg caccgcgtca cgggctgcct
     3361 cgggggtctt gacgagatag gcattctcgt tgtcgcggtt attcacgtga gggctggcga
     3421 cacagagctg tgtctctcgt catgggaatg acagcgacgt ctctgatcac gagggtgccg
     3481 ggggtaaccg ctcctcgaga cggctgctgt gccgacgcgg ctctttccgg tcgcgcgctg
     3541 ccccacgcag ccaccacgac gagtccatac gcgagcgcaa tcgctcgccc gccgcggggc
     3601 gatcttgtcg tcacgtcagc ctccggttcc gcgtcctcgg gttcatcccg ggaatgtgcc
     3661 aacgccgtgg acgtcgagct agtatgatgt tgcgagcatc ggacgtcggg ttctctgagc
     3721 cggtgacgcg ggcctacttc cccgagatct ggatgaagtt ccccgcgttg tcacggatca
     3781 tgacgttcgc cggctggtcg gatcgcttag gatatgggtc ataagcgatg cctacaccac
     3841 gcacccgaag cgcggcgagc gtcttgtcga agtcatcgac aataaggccg actttgaaga
     3901 tgccgtgaac ggaaatggca ccgcctcccg cgggatggac cgtgcctaac ggcacaacgt
     3961 cgtcgtgctg cgccagctcg acggttagcc ctcctgcttg cagaacggcc acccgcgacc
     4021 gagtcgcgtc ggcgacctca cgtcggtggg cagtggtgat ttgctggtcg ccctgcccac
     4081 ggttactcgg acctcagcgc ctccaccgga tcgacccggg tcgcgcggaa cgccgggtac
     4141 aggcaggcga gcagcgcgac gcaacccagc gagaaggcag ccagcgtgag cgtcaccgga
     4201 tctcggggcg cgatgttgaa gagtagaccc tcgagcagcc gcgccacccc cagcgcaccg
     4261 gccaggccca ggatcacacc cagcatcgcc aagcgaccgc catcccggag gaccagtccg
     4321 agaatccgct gccgggtggc cccgagggcc gtgcgaatcc ccagctcgcg gtgacgttcc
     4381 gccacccggc gcgacaacaa cccatagatg ccggccgcgg ccagcagcag cgccacgccg
     4441 gcgaaggctt cgaacaaccg cacgatgagc cgccggtcgg cggtgctcac cttgattcga
     4501 tcctgggcgc tggccacgtc gctcacggca atagcggggt cgaccgatcc gatcgcccga
     4561 cgcaccggct ccgtgacact ggagggctcg cctcgagttc ggagcaccac caccacgctg
     4621 ttctcggacc agagccactg ggtcgcggga acgtagaact gaggaccctg ggcgtcatcc
     4681 aatcccagat gcttgacgtc acccacgacc ccgacgatgg tccgccaggg agtatcaggg
     4741 ccgcccatct ggatccgctt cccgatcggg ttggctccgg gccacttcag cttcgcaaaa
     4801 gtctcattga tcagcgcgac cggcatggcg ccgccgcggt cctgctccgt caggccgcga
     4861 ccgcggcgaa ccgggatacg catggcttcc aggtaccggg gtgaaaccgt gtatcgatcg
     4921 gcgctgggag cctcctccgg gttggccaac ggctggtcct gtatctgaac cccgtagcgg
     4981 tcgaagttgc cgcccagcgg aatctgagtt gcgaatgcgg ccgcctccac tcccggcaca
     5041 gccgccagag cctcgagcag ctgttcctgc atctgccaga ccaccgtgtc cgattgatat
     5101 ctgggtccgc tggcggtgac ggtcatggtg aggaggttcg acggctcgaa gccgggttcg
     5161 accgacagca cccgcgacag actccgggtc aggagaccgg cgcctgaaag cagcatgaag
     5221 gcgagcgata cctccgcgac caccagcgcg ccggtgactt gccgctggcg ctgtcccgtg
     5281 gtcacggaac gcgccgtcac cggcatggcc gcccgccgga gcgacatgac gcccggcaca
     5341 acgcctacca gcaacgcgac cgccagggtc gccgccaggg taatgagggt gactctccaa
     5401 tcgagcgcga tggaatcgag tcgcgggaga ttcgcggggc tcagcccgat cagtgcggcc
     5461 acgcccgctt tcgccagcag cagtcctgcg gccgcaccgg ccagacagag gaccgcgctc
     5521 tcggtgatca gctgctgcat gagccgccaa tggccggcac caagagcggt acggagcgtc
     5581 aattcggctt cgcgctcggt ggttcgcgcc aataccagat tgccgacgtt ggcgcaggcg
     5641 atcgccagta cgaagacccc ggcgccgagc atcatcagca aggcgggttt cacgtcctga
     5701 accagctgat ccttgagccg gtgggctcga atcccggtca tcgcgtactg gctcgagaag
     5761 tcctgtttga gccgggccgc taccgtcgcg agttgcgcct gggtctcctc caacgagggg
     5821 ccggcccgca gccgagcgac gacacccagg tggcgacagg tccggcaggc ctgcgggagg
     5881 gtgtcgttat atgctagagg ccgccagatc tgcgccatgg gattgagcag actctcgaac
     5941 gacgggggaa gcaccccggc gacgcggtag tcatttccgc cgagccggat ggaccggctg
     6001 acgacgtcgg ggtcagaccc gaatcggcgg cgccacaatc catggcccag gatcacgacc
     6061 cggttctggc caggcgcatc ctccgcggcg gcaaagtccc gcccatgcag catcgtgacc
     6121 ccgagcagct tgaagaattc ggccgagacc gactggccga ccagctgctc ggattcggtt
     6181 tcacctgaga ggattggccc ccagcccgaa atggccgcgc ccgattcgat cgatggcaca
     6241 tcgcggcgca gatcggcgaa ggtcgaccac cccatggtgg ttgagaactc accgctgagc
     6301 tcgatctctc ccagcacgac cagccgatcg gaatcagggt agggaagcgg ccggaacagg
     6361 attggattgg cgacactcaa caccgcggtg gtggcaccga tgccgaccgc gagggtgaat
     6421 atcacgatgg cggcatagag cgggcggcgc cgcagctggc gcaacgcgta gcggaactcg
     6481 tgcagcaggt cacccatggc gaagagactc gtgggcggaa ggtcgtggcc ggacgtggga
     6541 gagaaggtca tgcggagcgc cgccaccgcc tgccggcgat accagcttcg ggccgcgcgg
     6601 tcgccgtccc cggcccgacg ggagtggtac tcctcctcca ggtcgcccag gatggcgtcg
     6661 cgctcggatt cggggaggag ccgggcgagc agccgagtga tgagatcggg tggcttcatg
     6721 agagctcgag cgcttcgggg agacccacac tcatgcgccg gatggtggcc aggcttcggg
     6781 ccagcgcccg gcggccttcc ggaaggaccc ggtagtggcg cttgcgccgg ccgccccgtt
     6841 ccggagtcgg ttctccggtg aaagcgccga ccaggccctt ggcctccagc cgggccaggg
     6901 tcttgtagac cgcacccagc gttacctcac gtcgggcccg ctgctccagt tcgcggtgga
     6961 cgatcatgcc ataggcgccg tctcccaggc ggaccagggc cagcaggacc aactgctcga
     7021 actcacccag cccgtcgccc attttttact ccgacaatga cggggatata gacgcagccg
     7081 gggcggaaaa ggttgcaagg ggagggacta ttgccccaac cacctgccgt tattagcttt
     7141 gcccctaggg ccgcacatgg tatgaatctg tgatcctgat ccatgagtaa cgagaagggg
     7201 cctggaagtc tcagtcccct tttctgcgtt tccaccggtt ccgtttctcg gcgttgagat
     7261 gggacacccc gcgggcgggt tggcccgaac aagctggtag tcggtccagt cggcctcgcc
     7321 gcactccgat tacagcacaa agtggagcgg tacatgcgca cgactggcac cgtgaagtgg
     7381 ttcaacgacg cgaagggctt tggtttcatc acccccgaag gtgggcagaa ggattgcttc
     7441 gttcatcatt cggcgatctc gggtcagggc ttcaagtccc tggctgaagg agatcgggtg
     7501 gagttcgacg tggtgcaggg cgccaaaggc ccggccgcgc agaatgtggt gaagctcggc
     7561 cgctaagtcg gtccacagac acgccagtag aaggccggcc cactccaggg tgagccggcc
     7621 tcggtgtttc tacgggccgc gaccccggct catgcatgtt acctccgtac gctacaatgg
     7681 tttagcctca ctggtgtgga gtccggaggc gtcacggcgt cacccccaat aggagcgttt
     7741 gctctcgaga gggggacccc gtgaatgatc agcaggtcca cgcgtaccac gcccgtcgct
     7801 tgctcgtggc tccgccgcgg aaataccgcg tccaggttgg ccccagccac cgaacgctgc
     7861 ggattctgcg cgagttggtg aactacgggt tcgtcatcat atatgccgcc ctcagtgccc
     7921 gtctcctcct cctgcttttg cccggcacgg tggggcacat cctgacccgt atggtgtcgc
     7981 cgctggccga tccgctggcc gcaccgctgg ttggggtggt gcctgagctg gtgttcctgg
     8041 gtgacctcgc gatcctgccg ccggtggcca tcgcgctgtg cgcctatgcg ctggctcacc
     8101 gcggcctttc gacggtgctg caggtcctgt cccgtccccg gctgggccgg ccgtccgctc
     8161 tccggcaggg aagtctgctt cacagcgtcg gtcccaccga ccgaatgcag ccggtgagct
     8221 ttcgagctcg tgaaccatac cttgcgccct agattcctga ggtggtctga ccgaacgcct
     8281 tgccggagtc acccatgacc agacacgcca ccgcgacgtt cgagctcacc ggctggaacg
     8341 agaagccgtt tgacgaaggc gaagtgctgc cgaaaatcac ccgcgccagc gtcaccaaga
     8401 agttccaggg cgacgtggag ggcgagagta aggtcgagta cctgatgatg taccgggacg
     8461 acgggaccgc cacctacgtc gggttggagc ggatctccgg acagctggcg ggcaagcggg
     8521 gcagcttcgt cctcttgcac gaaggcgtgt tcga
//
LOCUS       DASWKS010000142         2864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1170925, whole genome shotgun sequence.
ACCESSION   DASWKS010000142 DASWKS010000000
VERSION     DASWKS010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1170925"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2804)
                     /gene="dnaE"
                     /locus_tag="VGA78_04315"
     CDS             complement(<1..2804)
                     /gene="dnaE"
                     /locus_tag="VGA78_04315"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX9893119.1"
                     /translation="MFAHLHVHSHFSFGQGASSPGAIVESALRHGFTALACTDTNGVW
                     GAVEFQQAAEAAGIRPILGAHLVVGGREAVVLAEDERGWGTVCRLVSGVHWSSGGRAG
                     GRAGGRPDEFRPTDPLTDTTDLLDRPGIIVLSPSISLLERLARTTGPDRLFAELRPGQ
                     ERHQVLAAARRIGVPPVVTNAVMFANPEDWSKHRLLTAIGANTTLSACPPDRLSARGS
                     WLKSEAELRRHFPDVPDAIDRAGELAQRCRYRIPIGERIVAPRLSDTDDAIERLRALA
                     YQGAARRYGTVAPITRDRLEHELGIIAGKRFADYFLVVKDIVEHGPTHCGRGSVANSI
                     VSYSLGITHVDPLAAGLLFERFLNPARQDPPDIDLDFPWDERDRVLAYVFRRYPHPRA
                     AMVANHNCFRLRGALREVAKVHGRPEGEIREVTRRIPWFHEDGSLESMLATHPNFSAL
                     DLPPSWRELAREAQPLIGIPRQVSLHPGGVVVVPTTLHDYVPTQPAAKVLEGFPDLTV
                     PVMQFEKDGTEDAGLVKIDLLGNRSLAVIRDGIAMVKANTGVQLDYSSSDAGDDPATR
                     AQFRTGQTLGVFYTESPASRLLCQKSRAETFDLLVLNTSIIRPASNRFIRVYLERLHG
                     APYQPLHPCLRDTLGETFGVMVYQEDVVNVSAVFAGMPLSSGDGLRKALAKKRPVKQL
                     ASYAEEFFTGAERLGRDPAVAQTVWEMVMSFAGYSFCKGHSCSYIQVAQQSCFLRANY
                     PAEFFAGVLANGGGFYSAFAYVAEAMRQGLRVRPPDVNASVVRTMGRGQEIRIGLQFV
                     KGLSSAAAERLTDRRTDGPTDRPYTDLPDLWRRTGIASDDLRTLIRAGALDSIANGWT
                     RPMMLWEVDRSEKSQRSEALPLLSARPPARPPALREYSDQRKREEEYRALGFTTEGHP
                     MDLYRDRLARFRLVRSVDLP"
BASE COUNT          501 a          949 c          983 g          431 t
ORIGIN      
        1 ctcggaagat cgaccgatcg gaccagccgg aaccgcgcca gccggtcgcg atagagatcc
       61 atcggatgcc cctcggtggt gaagcccagg gcgcggtact cctcctcgcg cttgcgctgg
      121 tcggagtact ctctcagggc gggcgggcgg gcaggcgggc gggcggacag caacggcagt
      181 gcttccgacc gttgcgactt ttccgaccga tcgacttccc acagcatcat gggacgggtc
      241 cacccgttcg cgatcgaatc caaagcgcca gcccggatga gggttcgaag atcgtcggag
      301 gcgattccgg tgcgacgcca caggtcgggg agatcggtgt agggccggtc cgtcggtccg
      361 tcggtccgtc ggtccgtcag acgttctgcc gcggcggagg acaatccctt gacgaactgc
      421 agcccgatgc ggatctcctg gcctcggccc atggtgcgca ccacgctggc gttcacgtcg
      481 ggcggccgga cccgaagacc ctgccgcatg gcttcggcca cgtacgcgaa cgcgctgtag
      541 aacccgccgc cgttggccag gaccccggca aagaactcgg cgggatagtt ggcgcggaga
      601 aagcaggact gctgcgccac ctgaatgtag gagcaggagt gacccttgca gaagctgtat
      661 cccgcgaagg acatcaccat ctcccacacg gtctgcgcca cggcgggatc gcgtcccagc
      721 cgctcggcgc cggtgaagaa ctcctcggcg taagacgcga gctgcttcac cggccgcttc
      781 ttggcgagcg ccttgcggag cccgtcgccg ctggacagcg gcatgccggc gaagacggcc
      841 gagacgttca ccacgtcttc ctgatagacc atcaccccga aggtttcgcc cagggtatcg
      901 cgcaggcagg gatggagcgg ttgatagggg gcgccatgca gccgctccag atagacccgg
      961 atgaaccggt tggaggcggg ccggatgatg ctggtattga gcaccagcag atcgaaggtc
     1021 tccgcccggc tcttctggca cagcaggcgc gaggcgggtg actcggtata gaagacaccc
     1081 agggtctggc cggtccggaa ctgggcccgg gtggcgggat cgtcgccggc atcggaggag
     1141 ctgtaatcga gctggacgcc ggtgttggct ttgaccatgg cgatcccgtc gcggatcacc
     1201 gccagcgagc ggttgcccag cagatcgatc ttcaccagcc ccgcgtcctc ggtgccgtcc
     1261 ttctcgaact gcatcaccgg caccgtgaga tcggggaatc cctccagcac cttggccgcg
     1321 ggctgggtgg gcacgtagtc gtgcagcgtg gtcggcacca cgaccacgcc gccgggatgg
     1381 agcgacacct gccggggaat gccgatcagc ggctgggctt cgcgggccag ctcccgccac
     1441 gagggcggga gatccagcgc cgagaagttg ggatgggtgg ccagcatcga ctcgagcgag
     1501 ccgtcttcgt ggaaccaggg gatccggcgg gtgacttcac gaatctctcc ctcgggccgg
     1561 ccgtgcacct tggccacttc ccgcagcgcg ccccgcagcc ggaagcaatt gtgattggcg
     1621 accatggcgg cgcggggatg gggatagcgc cggaagacat aggccaggac ccggtcgcgc
     1681 tcgtcccagg ggaaatcgag gtcgatgtcg ggcggatcct ggcgggccgg attgagaaag
     1741 cgctcgaaca agagcccggc tgccagcgga tcgacgtggg tgatgcctaa cgagtacgag
     1801 acgatggagt tggcgaccga gccgcggccg cagtgggtgg ggccgtgctc cacgatgtcc
     1861 ttcaccacca ggaagtagtc ggcgaaccgc ttcccggcga tgatgccgag ctcgtgctcc
     1921 agccggtcgc gggtgatcgg cgccaccgtg ccgtagcgcc gggcagcgcc ctggtaggcc
     1981 agggcccgca gccgctcgat ggcgtcatcg gtatcgctca gccgaggtgc cacgatccgc
     2041 tcgccgatgg gaatccggta gcggcagcgc tgggccagct ccccggcgcg gtcgatcgcg
     2101 tcgggaacgt cgggaaaatg gcgtctcagc tccgcttcac tcttgagcca ggaaccgcgg
     2161 gcggacagtc ggtcaggcgg acaggcggac agtgtggtgt tggcaccgat ggcggtgaga
     2221 agtcgatgct tcgaccagtc ttccgggttg gcgaacatca ctgcgttggt gaccaccggc
     2281 ggaacgccta tccgacgagc ggccgccagc acctggtggc gctcctggcc gggccggagc
     2341 tcggcgaaaa gacgatcggg cccagtcgtg cgagccaacc gctcgaggag cgaaatactc
     2401 ggtgacagga cgattatccc cggtcgatcc aacaggtcgg tcgtgtcggt cagtgggtcc
     2461 gtcggtcgaa actcatctgg tcgcccgccc gcccgcccgc ccgcccgccc gcccgaagac
     2521 caatgcaccc cgctgaccag ccggcacacc gttccccacc cccgctcgtc ctcagccagc
     2581 acgaccgcct cccgcccgcc caccaccaga tgggccccca ggatgggccg aattccggcc
     2641 gcttcggccg cctgctgaaa ctccaccgcc ccccacacgc cgttggtgtc ggtgcaggca
     2701 agggccgtaa agccatgccg cagagcggat tcgacaatgg ccccagggct cgaggccccc
     2761 tgaccgaagg agaagtgaga atggacgtgg aggtgagcaa acattcgggc ctcgaccctc
     2821 acccactata cccgaacaaa acccgaagtc aagccagtgg ctgt
//
LOCUS       DASWKS010000143         6261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2294507, whole genome shotgun sequence.
ACCESSION   DASWKS010000143 DASWKS010000000
VERSION     DASWKS010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6261
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2294507"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..2409
                     /locus_tag="VGA78_04320"
     CDS             19..2409
                     /locus_tag="VGA78_04320"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9893120.1"
                     /translation="MGDEKDFEQWSERERARHAERYIEALERLAESAHAQGDSAGAVR
                     WWRQVVVADPLRAQGALGLMRALAAAGDSAGAVQHARIYDRLLRDELELPPDRAVTQL
                     SEVLQATRTSSTPGHGPSVTASEIPLTSENREEGHAGSGSRHPGDLKPVQQASNSLIR
                     KLLAVGGVGLVGVLLLAAGVLIRSRDRGRALLEPGWVLIADFEGPAEDPTLTRAVREL
                     VRSALIESGVVQTVPSDLVQEARRQAQVPDTARMTADIARHIAFRTAVEMVVDGSVMP
                     VGQNGYGIALRLVGVSDGRVLASASGAATEQTIIAESGKLARRVITGVHPAPVGGRTV
                     PPVEVMTPSFEAYRRFVEGEEPFQAGNYTRALGFYRDALERDPDFAHAWLQIGLAFQG
                     LNMPDSSDRALRQAALGIARLPPAARIMLAGKLTNRHADRVRALEQIIRLWPMAPDAY
                     QERAEELQFLARYDEALVSLERAYATWPLGRPPRTVIEYAGFLAALGRYEEAEGVGKE
                     LTGYFRESLIAHIELVSGNWAKAESLAVAILQDPSLPPVRRFRMNLIIGSACATRGQL
                     QKADRLFAEAERAALREGIFGPGSSHWGIGYQRLVQALAGGRKPIGPVVEVRRDTSTA
                     ATIMEAIWAAFAGDLELASRSREVVAALGIDDGYGLWRDLLGLEASLYAVRGDWDSVT
                     RTLAQVAYEGGGQIEGGVVFRRWLVADAYERLGNADSAAAFLEMIVTLQRTSWWESFA
                     KGPVYSFAHRRLALLYAKLGKPELARRHWARFIAMFTDPDPDLIWMREEARGALEQ"
     gene            complement(2864..3199)
                     /locus_tag="VGA78_04325"
     CDS             complement(2864..3199)
                     /locus_tag="VGA78_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893121.1"
                     /translation="MVNVIDATYRADLRELNELNFARFDAKLEQRVAELETKLDRRMA
                     ELETKLERRMAELEAKLDRRTGELERAMEAGFECLRTELATQRAEMIKWSFLFWIGMV
                     VTVFVSRVI"
     gene            3445..5775
                     /locus_tag="VGA78_04330"
     CDS             3445..5775
                     /locus_tag="VGA78_04330"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9893122.1"
                     /translation="MLTILAAIVVAVDTGGTYPGASGQIRVALPRLEAAATIDGVLDD
                     PVWQRAARLTGFSQYAPVDGRPAELETEILVWYSPTALHFGVRAQAPAGSVRATLANR
                     DRLTSEDRIEFYLGTYNDGHQALVFAVNPLGVQQDGTLAEQGRTNGGREGTDLSPDFV
                     YDSRGRLTADGFEVELRIPFKTLRYQSADPQDWGLHVIRRVEATGHEYSWVPALRAAP
                     TFLGQSGTLTGLTDLRRGLVMDLNPVVTARATGGPSSSDPADWRYDRTGELGGNLRWG
                     ITPNLTVNSTFNPDFSQVEADASQIVTDPRRALFFPEKRPFFLEGIEQFNTPNQLIYS
                     RRIAAPSGAAKLTGKVSGTTVATMLALDGREVSRTGTDHPFFAIARVQRDLGGGSRAG
                     LVFTNRSEPGFANQVGGVDARVVLDGGLALSGQVAGSRTARDGESELAPLWELDLRRA
                     GRHFGFNATFEGVSDQFLAGAGFISQPDAVSLGGSPSWIVYGNPGALVARATGSFRLN
                     ARWIYDDFVAGRELLDRQLFLTGNVEFKGGWVLNLFSWFERFGYDFRLYRSYALERHL
                     PGGVVDTIAPYPGSGAVPNRGIDLTVRTSWVGPFASNFNLTYGNDVNYDEWSPATILF
                     VNSSIQFKPTSQLRADGTYILTAYQRKSDGSMVSVSHIPRLKVEYQVTRSIFVRAVGE
                     YRSSHRDALRDDGRTNDPILILDPGDGIYKRSLALEQESDGLRGDLLFSYQPTPGTVF
                     FAGYGGSFRDTGRFRFESLDRTSDGFFLKASYLIRL"
     gene            5804..>6261
                     /locus_tag="VGA78_04335"
     CDS             5804..>6261
                     /locus_tag="VGA78_04335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893123.1"
                     /translation="MSGSHQIFLLSPAHCSGKRAGLLLRNDAGSALAHRLRIGAGATL
                     GEVFTFMSGLYFRGKLAYAASFANPPDGCPGIQVIVPGLGLCPPSTTIDLDGLRAIAR
                     VPVDLRDRRYTGPLRRDASLLARRLNPGDEVILLGSIATPKYLQPLTDILG"
BASE COUNT         1058 a         2054 c         2034 g         1115 t
ORIGIN      
        1 ttcctcgatg ggttctacct gggggacgag aaggacttcg agcagtggtc ggagcgcgaa
       61 cgagccaggc acgccgagcg gtacatcgag gcattagaac ggctggccga aagcgcccac
      121 gctcaaggtg attcagcggg cgccgtgcgc tggtggcgcc aggtggtggt ggctgatccg
      181 ctgcgagcgc aaggagcgct cggtctcatg cgcgcgctgg cggctgccgg cgacagcgcc
      241 ggtgcggtac agcacgctcg gatctacgat cgactgctgc gagacgaatt ggagttgccg
      301 ccggatcggg cggttaccca gttgagcgag gtgctgcagg caaccagaac atcctcgacg
      361 cccggccatg gcccgtcggt gacggcctcg gagatcccgc tcacctcaga gaaccgcgag
      421 gagggccatg ccggaagcgg atcccggcac cccggggacc tgaagccggt tcaacaggcg
      481 agcaactccc ttatccggaa actgctggct gtcgggggcg taggcctggt gggtgttctc
      541 ctcctcgctg caggcgttct cattcgttca cgcgaccgag gcagagcatt gcttgaacct
      601 ggttgggtcc tgatcgccga cttcgagggc ccagccgagg atccaaccct gacccgggca
      661 gtccgtgaac tggtccgctc ggcgttgatc gaatccggcg tagtgcaaac cgttccatcg
      721 gacctggtcc aggaggcgcg ccgacaggcc caggtaccgg acacagcacg aatgacggcc
      781 gacatcgccc gccacatcgc atttcgaacg gccgtcgaaa tggtggtgga tggctcggtg
      841 atgccggtcg gccagaatgg ttatgggatt gcgctccggt tggtaggcgt gagcgacggc
      901 cgggtactgg cgtccgcgag cggagcggcc actgaacaga cgatcattgc tgagagcgga
      961 aaactcgctc ggagggtgat caccggcgtt cacccagcgc cagtgggcgg ccgcaccgta
     1021 ccccctgtcg aggtgatgac gccttcattt gaggcctatc ggcgcttcgt cgagggagaa
     1081 gagccgtttc aagccgggaa ctacacccgg gcactgggat tctatcgcga tgcgctggag
     1141 cgtgatccgg atttcgccca cgcatggctt cagattgggc tcgccttcca gggcttgaac
     1201 atgcctgatt cgtcggatcg tgcgcttcgc caggcggctt taggcatcgc tcgcctccct
     1261 ccggctgcac ggataatgct cgccgggaaa ctcaccaatc gccatgccga tcgtgtcagg
     1321 gcactcgaac agatcattcg cctgtggccg atggctcccg atgcctatca agaacgggcg
     1381 gaggagttgc agttccttgc ccgctatgat gaggctttgg tgagcctgga gagggcctat
     1441 gcgacctggc ccttgggtcg tccaccgcgt acggtcattg agtatgctgg cttcctggct
     1501 gcactaggtc gatatgagga ggcggaggga gtcggaaagg agctcaccgg ctattttcga
     1561 gaatcgctca tcgcacatat agagttggta tccgggaact gggcgaaggc ggagagcctg
     1621 gcggtagcca tcctccaaga cccctcgctc ccaccggttc ggcgcttccg aatgaacctc
     1681 atcataggat ctgcctgcgc gacgcgcggc cagttgcaga aggccgatcg cttgttcgcc
     1741 gaggccgagc gcgcggctct ccgggaggga atcttcggcc cgggctcgtc ccattgggga
     1801 attgggtacc agcggttggt acaggcgctg gccggcggca ggaaaccgat tggaccggtt
     1861 gttgaggtgc ggcgggacac cagcaccgcg gccacgatca tggaggcaat ctgggctgcg
     1921 ttcgcgggcg acctggagct tgcctcgcgg tcgcgagaag tggttgccgc gcttgggatc
     1981 gacgacgggt atggcctctg gagagatctt ctcgggctgg aggccagtct ctatgctgta
     2041 aggggcgact gggattcggt gacccgcacg ctggctcaag tcgcctacga gggtggcggt
     2101 cagatagaag gtggtgtggt cttcaggcga tggctcgtgg cggatgccta cgaacgcctg
     2161 ggcaacgccg actcagctgc cgccttcctc gagatgatcg tgacactcca gcgaacctcg
     2221 tggtgggaga gcttcgcaaa agggccggtt tactcgtttg cacatcgtcg ccttgccctc
     2281 ctctacgcca agctgggaaa gccggagtta gcccggcggc actgggcgag gttcatcgcc
     2341 atgttcaccg accctgatcc ggacctcatc tggatgagag aagaagcacg cggagcgctg
     2401 gagcagtagg acaacgtaca gcactatcag cacgtctacc tgagaggccc cccgccggcg
     2461 ctgcctccgc aatcagttga agcgcacgct gcgggtcctg gtcgcccacc cgcgatccgg
     2521 gattgcaccg ctcggtcggc ctcaggtgcc ggatccgatc cgggtgacga accctaccag
     2581 atccgcggcg aaccggcttg gttcctccca gtggaccggc gtgagccagc gagccctcgc
     2641 attgaacaag gacccgggcc ccactaccga atggtgaaac gcgtcaccgg aaggacctgg
     2701 ggagaggtgc tgcgactcgg gcatccttgg gtgatatccc agatcgggac tctcgcacac
     2761 cgtcaggact gcccggtcca gaaactgaag ctggttcctg ccgggggcgt cctcgccccg
     2821 cgtcactcaa atgtcggtgc cgaggagaac cgacgccgtt gggctatatg acccgggaaa
     2881 cgaacactgt gacgaccatc ccgatccaga agaggaagga ccacttgatc atctcggccc
     2941 gctgggtcgc gagctcggtg cggagacact cgaatcccgc ctccatggct cgctccagct
     3001 ccccggtcct gcggtcgagt ttggcctcga gttccgccat ccggcgttcg agcttggtct
     3061 cgagctccgc cattcggcgg tcaagcttgg tctcgagctc cgccacccgc tgttccagct
     3121 tggcatcgaa ccgcgcgaaa ttcagctcgt tcaactcgcg gaggtcagcc cgataggtgg
     3181 cgtcgatcac gttaaccatt ccaccagctc gttagcgatt tcatcgccaa aagtttcacc
     3241 caaactgccc accaaaacgt agacagcacc ggaaagggtg gcaaatgaac gccacccagt
     3301 accgaatccc gcgtcagtcc tgcctcagcg caccattggg atcgaccttg tcagctgcgc
     3361 cgctgaaacc ggcatcggtg gcacgacgta cgcctccaca gtaccgtcca ggttttacaa
     3421 tcccgaggac aggagtcgtc tgcgttgctg accatcttgg cggccatagt ggttgccgtg
     3481 gatacgggtg ggacctaccc gggcgccagc ggccagattc gggtggccct gccccgcctc
     3541 gaggccgccg ccaccattga cggcgtgctc gacgatccgg tatggcagcg ggccgctcgg
     3601 ctcaccggct tctcccagta cgccccggtc gatggccgcc cggccgagct cgagactgag
     3661 atcctggtct ggtattcgcc caccgcgctg cacttcgggg tccgggccca ggctccggcc
     3721 ggttcggtcc gcgcgaccct cgccaatcgc gaccggctga cctcggaaga ccggatcgag
     3781 ttctacctcg gcacctataa cgacgggcat caggccctgg tgttcgcggt gaatccgctg
     3841 ggcgtgcagc aggacggcac cctggcggaa cagggccgca ccaatggcgg ccgcgaaggg
     3901 accgacttga gtcccgactt cgtgtacgac tcgcgcgggc gactgaccgc tgacggtttc
     3961 gaggtcgagc tcaggatccc cttcaagacg ctgcggtatc agtcggccga tccccaggac
     4021 tgggggctgc acgtgatccg gcgggtcgag gccaccggcc acgagtactc ctgggtcccg
     4081 gctctgcgcg cggctcccac cttcctgggc cagtccggaa ccctgaccgg cttgaccgac
     4141 ctgcgccggg gcctggtgat ggatctgaac ccggtggtca ccgcccgcgc gaccggggga
     4201 cccagctcct cggatccggc cgactggcgc tacgaccgga ccggcgagct gggcggcaat
     4261 ctccggtggg ggatcacgcc gaacctgacc gtcaacagca ctttcaatcc cgacttctcc
     4321 caggtcgagg ccgacgcgag ccagatcgtc accgatcccc ggcgggccct cttctttccc
     4381 gagaagcggc ccttcttcct ggaaggcatc gagcagttca acacgcctaa ccagctgatc
     4441 tattcccggc ggatcgccgc gccgtcgggc gccgccaagc tcaccggcaa agtgtcgggc
     4501 accacggtgg ccaccatgct ggccctggac gggcgcgagg tgtcccgaac cggcaccgac
     4561 catcccttct tcgcgatcgc gcgggtccag cgggacctgg gcggcggatc gcgcgccggt
     4621 ctggtcttca ccaaccggag cgaacccgga ttcgccaacc aggtcggagg cgtggacgcc
     4681 cgcgtggtgc tggatggcgg actggcgctg tcgggccagg tggccggcag ccggaccgcg
     4741 cgagacggtg agtcggagtt ggcaccgctc tgggaactgg acctgcgccg cgccggacgc
     4801 cacttcgggt tcaacgccac cttcgaaggc gtgagcgacc agttcctggc gggagccggc
     4861 ttcatcagcc agcccgacgc ggtcagcctg ggcggcagcc cttcgtggat cgtgtacggc
     4921 aatccgggag ccctggtggc gcgggccacc gggagcttcc ggctgaacgc gcgctggatc
     4981 tacgacgact tcgtggcggg acgagagctg ctggaccggc agctcttcct caccggcaac
     5041 gtggagttca agggcggctg ggtcctgaac ctcttttcct ggttcgagcg cttcggctac
     5101 gatttccggc tctaccggag ctacgccctc gagcgccatc tcccgggcgg cgtggtcgac
     5161 accatcgcgc cctatcccgg cagcggggcg gtgccgaacc gcgggatcga cctgacggtt
     5221 cgcacttcct gggtcggccc cttcgcgagc aatttcaacc tgacctacgg caacgacgtc
     5281 aactacgacg agtggtcgcc cgccacgatc ctgttcgtca actcgagcat ccagttcaag
     5341 cccaccagtc agctccgggc cgatggcacg tacatcctga cggcctacca gcggaagagc
     5401 gacggctcca tggtctcggt gagccacatc cctcgactca aggtggaata ccaggtgacc
     5461 cgctcgatct tcgtgcgggc ggtgggcgag taccgctcct cccatcggga cgcgctccgg
     5521 gatgacggcc gcaccaacga tcccatcctc attctcgatc cgggtgacgg gatctacaag
     5581 cggagcctgg cgctggaaca ggaaagcgat ggactgcggg gcgaccttct cttctcctac
     5641 cagccgacac ccgggaccgt cttcttcgcc ggctatggcg gcagcttccg cgataccggg
     5701 cggttccggt tcgagagcct ggatcgcacg tccgacggtt ttttcctcaa ggcgagctac
     5761 ctgatccggc tctagcgggc cgtccgcgct atcttccgga ccaatgtccg gcagccatca
     5821 gatcttcctg ctctcacccg cccactgctc cggcaagcgg gccggtctgt tgttgcggaa
     5881 cgacgccggt tcggccctgg cccaccggct tcgaatcgga gcaggtgcga ccctgggcga
     5941 ggtcttcacc ttcatgagcg ggttgtactt cagggggaag ctggcgtatg cagcgtcgtt
     6001 cgccaatcca ccggacggct gtccgggcat tcaggtgatc gtgccgggac tgggtctctg
     6061 tcctcccagt acgaccatcg acctcgatgg gctccgcgcc atcgcgcggg ttccggtcga
     6121 cctcagggat cggcggtaca ccggtccctt gcggcgcgat gcctccctgc tcgctcgacg
     6181 cctgaacccc ggcgatgagg tcatcctgct cggcagtatc gccactccga aataccttca
     6241 gcctctcacc gacatcctgg g
//
LOCUS       DASWKS010000144         2624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3032644, whole genome shotgun sequence.
ACCESSION   DASWKS010000144 DASWKS010000000
VERSION     DASWKS010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032644"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..871)
                     /locus_tag="VGA78_04340"
     CDS             complement(<1..871)
                     /locus_tag="VGA78_04340"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEX9893124.1"
                     /translation="MGYRWRTLATPPRGTPGFTSLLPNRTGVTFTNTVRDSLILANRI
                     LVQGGGVALGDVDQDGLVDVYLCRTDGPNALYRNRGDWRFEDITTAAGVAARDRYSTG
                     ATLADIDGDGDLDLLVLALGGPNAWFINDGTGRFTEQQLPDRAGSTTAALADVDRDGD
                     LDVFIANYKAYTTLDSLPPQVRAFDQLAREIAPRRFEILPQYTRDYRVVPREDLRGVS
                     IVQRADPDFFYLYQGGVFERIPFVSDRFRDEEGKPLSYEPESFGLAAMFADVDRDGDP
                     DLYIANDFEDPDEF"
     gene            complement(1000..2427)
                     /locus_tag="VGA78_04345"
     CDS             complement(1000..2427)
                     /locus_tag="VGA78_04345"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HEX9893125.1"
                     /translation="MSLLLLAGLAGACQRPLPPADPAMVAEWMQTYYGLIRAERISPP
                     VASRVLAYAAVALYEGLATGTGSLRSLAGQLNGLDSLPSPEPGQVHDPVLVAIAAERT
                     VLDSLFAEGLPATRAALAALVDSLALAREALGFPQDVKGRSDSLGVSIGQAVLRWASQ
                     DGFDSTRVRPWKPPEGPQYWVNDSRGDEYVPQSLSSATDFVALDNPAASFRAGAASER
                     GLVVNRPKSSSITTLKAVNPTGATEPWWGTIRPFVLKASDECPAPAPVEYSPDARSTF
                     RAEAERVYQSALGLTDEQRQVALYWADNPGQTGTPVGHWLSITSQVVDQLDLSVERAA
                     EVFVLATLAQADAFIGAWRTKFDTNVLRPVTYIRRHIEPRWEPFIVTPPFPEYPSAHS
                     VQSAAASTVLQTLLGPVAFDDSTNLAIGHPVRRFTSFLDAADEAALSRLYGGIHYPMG
                     IENGKAQGVCIGRKVLERVQTRRVN"
BASE COUNT          470 a          848 c          886 g          420 t
ORIGIN      
        1 agaactcatc cggatcctcg aaatcattgg cgatataaag gtcggggtcg ccgtcccggt
       61 cgacgtcagc gaacatggcg gccaggccga agctctccgg ctcgtaggag agcggcttgc
      121 cctcttcgtc gcgaaagcgg tcggagacga acggaatccg ttcgaaaacg ccaccctggt
      181 agagatagaa gaagtcagga tcggcccgct ggacgatgct gacgcctcgc aggtcttccc
      241 gcgggacgac gcggtagtca cgggtatact ggggaagaat ctcaaatcgg cggggcgcga
      301 tctcgcgggc cagctggtcg aaggcccgaa cctggggcgg tagggaatcc agtgtggtgt
      361 acgccttgta gttggcgatg aagacatcga ggtcgccgtc ccggtccacg tccgccagcg
      421 ccgcggtggt acttccggcc cggtcgggga gttgctgttc ggtgaagcgc ccggtgccgt
      481 cgttgatgaa ccaggcattg ggcccgccca gggccagcac cagcaggtcg aggtcgccgt
      541 cgccatcgat gtcggcgagc gtggcccccg tggaatagcg atccctcgcg gccactccag
      601 cggccgtcgt gatgtcctcg aaacgccagt caccccggtt gcggtaaagc gcgttgggcc
      661 cgtcggtgcg gcacaggtac acgtcgacca gtccatcctg atccacatcc cccagggcga
      721 ccccaccgcc ctggaccagg atccggttgg ccagaatcag tgaatcgcgg acggtgttgg
      781 tgaaagtgac gccggtgcgg ttgggaagca ggctggtgaa gccgggtgtg ccccgcgggg
      841 gggtcgcgag cgtccgccag cgatagccca cttcctcggt ccacgggccc ggggtcgtag
      901 gacccgagca cgccgagaga gtgaacagca gcagagcacc cgcacccttc gaccgccttc
      961 gacccccttc gaccgccttc gaccgcgctc cagcgcccat caattgacgc gccgggtttg
     1021 cacccgttcg agcaccttac gcccgatgca gacgccttga gccttcccgt tctcgatccc
     1081 catcggatag tggatgccgc cgtatagccg ggacagcgcc gcctcgtcgg ccgcgtccag
     1141 gaaggacgtg aaccggcgca ccgggtgacc gatcgcgagg ttggtactgt cgtcgaaggc
     1201 caccggacca aggagggtct ggagcacggt ggaggcagcc gctgattgga cggagtgggc
     1261 cgaggggtac tccgggaagg gcggcgtgac gatgaacggc tcccatcgag gttcgatgtg
     1321 gcgccggatg taggtgacgg gtcgcaacac gttggtgtcg aacttggtgc gccaggcgcc
     1381 gatgaaggca tcggcctgcg ccagcgtcgc cagcacgaat acctcggcgg cccgctccac
     1441 cgagaggtcg agctgatcta ccacctggct ggtaatgctc aaccagtgtc ccaccggcgt
     1501 cccggtctgg ccggggttgt cggcccagta gagcgcgacc tgccgctgct cgtcggtcag
     1561 tcccagcgcg ctctgataca cccgctcggc ttcggcccgg aacgtggagc gggcatcggg
     1621 cgagtactcc accggtgccg gggcgggaca ttcgtcagac gctttgagca cgaagggccg
     1681 gatcgttccc caccagggtt cggtggcgcc ggtcgggttc accgccttca gggttgtgat
     1741 gctgctggac ttgggccggt tgaccaccag cccgcgctcg ctggccgccc cggcccgaaa
     1801 actcgcggcg gggttatcga gcgctacgaa atcggtagcc gacgagagac tctggggcac
     1861 gtactcgtcg ccccggctgt cgttgaccca gtattggggt ccttccggcg gtttccaggg
     1921 ccggacccgg gtactgtcga agccgtcttg ggaggcccac cgcaagacgg cttgcccgat
     1981 gctcactccc aacgagtcgg aacggccttt cacgtcctga ggaaacccga gcgcttcccg
     2041 ggcgagggcg agggaatcca ccagcgccgc taacgctgcc cgggttgcag gcagcccctc
     2101 ggcgaagagg gaatccagca ccgtccgttc ggccgcgatc gccaccagga ccgggtcgtg
     2161 tacctggccc ggctccggac tggggagtga atcgagcccg ttcagctgac cggcgaggga
     2221 gcgcaacgag ccggtgccgg ttgccaatcc ctcatacagc gccaccgcag cataggccag
     2281 cactcgtgaa gccaccggcg gcgagatccg ctcggcccga atcaggccgt agtaggtctg
     2341 catccactcc gccaccatgg ccggatcggc aggagggagc ggacgctgac aggcacctgc
     2401 cagcccggcc agcaggagca gactcacgct tcttaccaca agggaaccca taactgaaag
     2461 gtaagagtaa atcgcgaatg cccaatggct gagtgaatgc agaatgccca gtgcccgata
     2521 ggaatgccga atgcccaatg cccagtgccc atagcagagg taggtaggaa ggacccacct
     2581 ctgctgtggg cattgggcac tgggcattcg gcagtcattc cccc
//
LOCUS       DASWKS010000145         4247 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1929945, whole genome shotgun sequence.
ACCESSION   DASWKS010000145 DASWKS010000000
VERSION     DASWKS010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4247
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1929945"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VGA78_04350"
     CDS             <1..255
                     /locus_tag="VGA78_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893126.1"
                     /translation="KWNRFGFHARLASGPGATDGLIEVSMNGKTLGRYPNLDFRSHGQ
                     QAKNYFGNGYLLGWANSGYDATTRFWIGDVIIGPERPEGC"
     gene            complement(224..1429)
                     /locus_tag="VGA78_04355"
     CDS             complement(224..1429)
                     /locus_tag="VGA78_04355"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX9893127.1"
                     /translation="MGWRYLPPVHSPLSWPAVAAGIKAALKGDQGARDRFERVLAAHH
                     GVTRVLLTDSGTAALTLAMRLAMTATGRSRIALPAYCCYDLVTALNGARADVVLYDVD
                     PATLGPVWSSLEAALEAQPAAVVAAHLYGLPVDMPRVMETADRHDVVVIEDAAQGLGA
                     TLGGKPLGTFGHLRVLSFGRGKGVTAGRGGALLVAPGRRGLDGSERVQDSSRGVVELV
                     ALVAQWLLARPWLYRVPASLPGLKLGDTVYRDPAPPGSMSAVAAAVVEYTWKSQSSES
                     QNRRRNAARLLRIGNELPGLSIVLPIAPADAGWLRLPLLAPGIERADGRMRTARRWGV
                     MPGYPQSLETLPALPPRAPNLQLPGAARLVAELWTLPTHSMLTSGDLDRLERWLTATF
                     SSPRAFPDR"
     gene            complement(1432..2454)
                     /locus_tag="VGA78_04360"
     CDS             complement(1432..2454)
                     /locus_tag="VGA78_04360"
                     /inference="COORDINATES: protein motif:HMM:TIGR03019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemAB family XrtA/PEP-CTERM system-associated
                     protein"
                     /protein_id="HEX9893128.1"
                     /translation="MSLRVEGFAASPGEWNGFIGETRGATHCHRHEWLGVMAGSFGHE
                     TIALAARDGSGRLVGVLPLVRVRTLLFGHYLVSMPFLNDGGPIGTDEGVAALAAEAIR
                     LANQGNVKLLELRARETLPLQLRISRRKITVLLDLDPEPEKVFAGLPSKLRSQVRRPG
                     RAGVEIRFGKDQIEPFYDVFARHMRDLGTPVLPRRFFQQMSAHHGDQAWFAAAWLADR
                     PVAGGAGMRFGSEFEITWASSLREFNQIAPNMGLYWAFVERACREGVTVFNFGRCSPD
                     SGTHRFKRQWGGRDVPLHWYQYGPAALTPSPDQGGLIGLGPRLWRHLPLPLATALGPG
                     IVRGIP"
     gene            complement(2451..3293)
                     /locus_tag="VGA78_04365"
     CDS             complement(2451..3293)
                     /locus_tag="VGA78_04365"
                     /inference="COORDINATES: protein motif:HMM:TIGR03006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XrtA system polysaccharide deacetylase"
                     /protein_id="HEX9893129.1"
                     /translation="MNGITHFFSVDVEEHFHAHVFEQVVPQRAWNDQPSRVLAATDRL
                     LELLDQHRVRATFFILGWVARRSPALVRRIAAGGHEVGSHTWSHPRISRLTPPQFREE
                     LRSSKAILEDLSGEKVVGFRAPSFSIRPGMEWAFDVLLEQGFEYDSSLFPIRRPDYGY
                     PLAPTRPHDIVRGNGILREFPLATTSLLGVRIPAAGGAYLRHFPFWVIRRAFTQSALA
                     GVPAMLYVHPWEVDLGQPRLTVSRLTQIRHYGGLERTLPRLDLLLGEFRFGSVGDWLK
                     GSAA"
     gene            complement(3290..>4247)
                     /locus_tag="VGA78_04370"
     CDS             complement(3290..>4247)
                     /locus_tag="VGA78_04370"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9893130.1"
                     /translation="LVTGGAGFIGSHVAERLVRDGHRVRVVDNLSTGDERNLAHLNGQ
                     VEFRPDDLTDPAACRRAVQGVEVVFHLAALPSVPRSLEDPWGSYQHNVTATMQLLLAA
                     RDAGVSRVVYSSSSSVYGDTPVLPKAEPVEPLPRSPYAAAKLAGEQFVLAFARAGLIE
                     GVALRYFNVFGPRQSPTSAYAAVIPAFLAAAQAGRAASVHGDGSQTRDFTYVDNVVEA
                     NLLAASRPATAVNGVVCNVGAGQRTSLLELLQAVRDVTGIEILASHGAPRAGDVHDSL
                     ASLERARSALGYQPAVSLREGLVRTWQWFQERNQHPVPGLRA"
BASE COUNT          781 a         1431 c         1427 g          608 t
ORIGIN      
        1 aagtggaacc gtttcggttt ccacgcccgg ctggcgtccg gcccgggagc cactgacgga
       61 ttgatcgagg tttcgatgaa cggcaagacc ttgggccggt atcccaacct cgacttcagg
      121 agccacggcc agcaagcgaa gaattacttc ggaaacgggt atctgctcgg atgggccaac
      181 agtggatacg acgcaaccac gcggttctgg ataggagatg tcatcatcgg tccggaaagg
      241 cccgagggct gctgaaggtc gccgtcagcc agcgttccag ccggtccaga tcaccgctcg
      301 tcagcatact gtgggttgga agcgtccaga gctccgcgac caggcgggca gcaccgggga
      361 gctggaggtt aggcgcgcgg ggtggcagcg cgggtagcgt ctccagcgac tgcgggtatc
      421 ccggcatcac gccccagcgg cgagcggtcc gcattcgccc gtcggcgcgc tcgatacccg
      481 gggccagcaa cggcagacgt agccagcccg catcggccgg tgcgattggc aacacgattg
      541 acagtccggg aagctcgttt ccgattctaa ggaggcgagc tgcgttgcgt ctccggttct
      601 gactctcgct cgattgagac ttccacgtgt attcgacgac cgcggcggcc acagcagaca
      661 tggacccggg aggagcaggg tcgcggtaga ctgtatcgcc cagcttgagc cccggcaggc
      721 tggctggaac tcgatagagc catggccggg ccagaagcca ctgcgcgacc agggccacca
      781 gctcgacgac accgcgggaa gagtcctgga ccctctcgga gccgtccaga ccgcgcctgc
      841 cgggggcaac cagcaacgcc ccgccccgcc ccgccgtcac ccctttgccc cggccgaagc
      901 tcagcacacg caaatgtccg aaagtgccga gtggtttacc gccgagagtc gccccgagtc
      961 cctgggccgc gtcctcgatc acgacgacgt cgtggcggtc ggcggtctcc atcacccggg
     1021 gcatgtcgac cggcaaacca tacaggtgag cggcgaccac cgcggcaggc tgagcctcca
     1081 gggccgcctc caatgagctc cagaccgggc ccagggtcgc cggatcgaca tcatagagca
     1141 ccacatcggc ccgggcgccg ttcagcgcgg tcaccaggtc gtagcagcaa taggccggca
     1201 gagcgattcg ggaccgcccc gtggctgtca tggccaaccg catcgcgagg gtgagagccg
     1261 cggtgccgct gtcggtcagg agcacgcggg tgacaccatg gtgcgcggcg aggacccgct
     1321 cgaagcgatc ccgggcgccc tggtcgccct tgagcgccgc tttgattccg gcggccaccg
     1381 ccggccacga aagcggcgaa tggaccggcg gcagatagcg ccagcccacc gtcagggaat
     1441 ccctcgcacg atgcctgggc ctaacgcggt ggccagcggc agcggcagat ggcgccagag
     1501 ccgggggccc aacccgatca gaccgccctg gtcaggggac ggcgtcaacg cggcgggacc
     1561 atactgatac caatgcaagg gaacatcccg accgccccat tgtcgcttga atcggtgggt
     1621 gcccgagtcg gggctgcagc gtccgaagtt gaacaccgtg acgccttcgc ggcaggcccg
     1681 ctcgacgaag gcccagtaaa gccccatgtt cggcgcgatc tgattgaatt cgcgaagcga
     1741 ggaggcccag gtgatttcga actcggaccc gaagcgcatc cccgcccctc cggcgacggg
     1801 ccgatcggcc agccaggcgg cggcgaacca cgcctggtca ccgtgatggg ccgacatctg
     1861 ctgaaaaaag cgccgcggca acaccggcgt gcccaggtcg cgcatgtgcc gcgcgaagac
     1921 gtcgtagaac ggctcgatct ggtccttccc gaagcggatc tcgactcccg cacgcccggg
     1981 ccggcgcacc tggctgcgca atttggaggg cagtccggcg aacacctttt ccggctcagg
     2041 gtcgagatcg agcagcacgg tgatcttccg gcgcgaaatc cggagctgca acggcagggt
     2101 ctcccgggcc cggagctcca gcagcttcac attcccctgg ttggccaacc ggatcgcctc
     2161 ggccgccagg gcggcgaccc cctcatcggt gccgatcgga cccccgtcgt tcaggaaggg
     2221 catcgagacg agataatgac cgaacagcag ggtccggacc cgcaccagcg gcagcacgcc
     2281 gaccagacgg cccgacccgt cgcgggcggc tagggcgatg gtttcgtgcc cgaaggagcc
     2341 ggccatgacg ccgagccatt cgtggcggtg acagtgggtg gctcctcgag tctccccgat
     2401 gaacccgttc cattctcccg ggctggccgc aaaaccctcg actcgaaggc tcacgccgcg
     2461 gaccctttca accagtcacc cacgctgccg aaacggaact ctcccagcag gagatcgagc
     2521 cgtggcaggg tgcgttccag cccgccatag tgccgtatct gggtgaggcg agaaaccgtc
     2581 aggcggggct ggcccagatc gacttcccag ggatgcacat acagcatggc cgggaccccc
     2641 gcgagcgccg attgggtgaa ggcccgccgg atgacccaga acggaaagtg ccgaagatag
     2701 gcgcctcccg ccgccggaat cctgacgccg agcaacgacg tggtcgcgag cggaaactcc
     2761 cgcagaatcc cgtttccccg gacaatgtcg tggggtcggg tcggtgccaa gggatagcca
     2821 tagtccggcc gccggatcgg aaagaggctc gaatcgtatt cgaacccctg ctccagcagc
     2881 acgtcgaatg cccattccat gccggggcga atggaaaagc tgggggcacg aaatcccacc
     2941 accttctcgc cgctcaggtc ttccaggatg gccttggagg acctgagctc ctcgcgaaac
     3001 tggggtgggg tcaggcggct gatcctggga tgggaccagg tgtgagaccc gacttcgtgg
     3061 ccgccggccg cgatccggcg caccagcgcc ggagatcgtc gggccaccca tccgagaatg
     3121 aagaacgtgg cccgcaccct atgctggtcc agcagctcca gcaggcgatc ggtggcggct
     3181 aatacccggc tgggctgatc gttccaggcc cgctggggga ccacctgctc gaatacgtgg
     3241 gcgtggaagt gctcctccac gtcgaccgag aagaagtgcg tgatgccgtt cacgcccgga
     3301 gcccgggtac cgggtgctga ttccgctcct ggaaccattg ccaggtccgc accagaccct
     3361 ctctcagaga gaccgccggc tggtagccca gggcgctccg ggcccgctcg agcgaggcca
     3421 gcgaatcgtg aacgtcaccg gcgcgagggg cgccatggga tgccaggatc tcgatcccgg
     3481 tcacgtcgcg caccgcctgc agaagctcca gcagcgaggt acgctgccct gccccgacgt
     3541 tgcacactac cccgttcacc gccgtagccg gccgggacgc agcgagcagg ttggcctcca
     3601 ccacgttgtc gacgtaggtg aagtcgcggg tctggctgcc gtctccatga accgaggcgg
     3661 cgcgaccagc ctgggccgcc gccagaaagg cggggatgac cgcggcatag gcggaggtgg
     3721 gggactgtcg cgggccgaaa acattgaagt agcggagcgc cacgccctcg atcaggccgg
     3781 ctctggcaaa ggccagcacg aactgttcgc cagccagttt agcggcggcg tacggcgaac
     3841 ggggcagagg ctcgaccggc tccgccttgg ggagaaccgg cgtatcgccg tagaccgatg
     3901 aggagctgga atagacgacc cggctcacgc cggcatcgcg ggcggcgagc agtagctgca
     3961 ttgtcgccgt cacgttgtgc tggtagctgc cccagggatc ctccagggat cgcggcacac
     4021 tgggcaaggc ggccaggtga aagaccactt ccacaccctg gaccgcccgg cggcaggcag
     4081 cgggatcggt cagatcgtct ggccggaact cgacctggcc attgaggtgc gccagattcc
     4141 tctcatcgcc agtggacagg ttgtcgacga ctcggacccg gtgcccgtcg cggaccagcc
     4201 gctccgccac gtgggatccg atgaacccgg cgccgccggt cacgaga
//
LOCUS       DASWKS010000146         6139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1552965, whole genome shotgun sequence.
ACCESSION   DASWKS010000146 DASWKS010000000
VERSION     DASWKS010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1552965"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1907
                     /gene="infB"
                     /locus_tag="VGA78_04375"
     CDS             <1..1907
                     /gene="infB"
                     /locus_tag="VGA78_04375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEX9893131.1"
                     /translation="RENVLKTLAGMRGTSRKRRADEPSYRELLAGRAAEEAEKEKTRI
                     RVNEFISVSELAEIMKVPATQIVQFAFKELGLMVTVNQRLDFDQIELIASAFGFQAVK
                     ESEYMAEAEETAQAVEEESSLRPRPPVVTIMGHVDHGKTSLLDHIRKANVVAGEAGGI
                     TQHIGAYHVTRPDGRNITFLDTPGHEAFTAMRARGAQVTDIVVLVVAADDQVMPQTVE
                     AISHAKNAGVPLIVAINKIDLPTANVAKVKQDLLSHNVVLEDFGGQVLHAPISAKKGT
                     GIDQLLEQVLLQAEILDLKANPEGPVHATVLEATLDPGKGPIATVLIQKGTLHIGDYF
                     ICGRYSGRVRALFDERGKNVKEAGPSIPVQVLGFEGVPAAGDAFLVVADALAAREIAQ
                     KRQRLDREAQNRRSQRGGTLEDISRALKAGEVSGLPLIIKADQGGPAEALADALAQLS
                     TGEVRVDVIHRGVGAITESDVLFAKASGAIILGFHVRPDANARAAAERESVDVRTYRV
                     IYEAVEDVRNALEGLLKPEQKEIVLGEAEVMQIFKISKIGTIAGCMVRHGTITRTAKV
                     RVVRDGTAVYTGGLASLKRFKDDVKEVREGLECGIGVENYNDLKVGDRIESFRVEAVK
                     RTLESSSAGA"
     gene            1915..2280
                     /gene="rbfA"
                     /locus_tag="VGA78_04380"
     CDS             1915..2280
                     /gene="rbfA"
                     /locus_tag="VGA78_04380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX9893132.1"
                     /translation="MVKRTSHRPEQVAETVRQTVADLLTREVRDPRVSRVTVTGVRVT
                     ADLSHAEVRVIVGDPAQQERALEGLRSAAGFLRSKVAKALTTRIVPELAFEIDRGLEH
                     AHRIDTLLSSLKRPGGEPA"
     gene            2289..3134
                     /gene="truB"
                     /locus_tag="VGA78_04385"
     CDS             2289..3134
                     /gene="truB"
                     /locus_tag="VGA78_04385"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEX9893133.1"
                     /translation="MLIDKPAGPTSHDVVARVRRALGTRAVGHAGTLDPFATGLLVLL
                     IGGATRLARFVERLPKGYLAEATLGAATDTDDGTGHVTARRPLDPWPGESEIRVALAS
                     LVGTQPQRPPAYSARRVEGRRGYELARSGAAVALPPRDVTVYGIELLQWIPPVVQLRA
                     TVSAGTYVRALARDLGERLGTVAHCSALRREWIGPFRTEAALAPDQVTAHTPLLSPLE
                     LLAGMPHQVLDPDGAIAVRHGRSLPAEPEPLEGEVALVYEGRLLAVAQRVEQRWQPRV
                     VLEPA"
     gene            3131..4057
                     /locus_tag="VGA78_04390"
     CDS             3131..4057
                     /locus_tag="VGA78_04390"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX9893134.1"
                     /translation="MTAALPFPPAGSVVTVGSFDGVHVGHVAVLREISERARAAGRVS
                     VLVTFEPHPMEVVNPTAAPPLLTTPVERREILAQTDLDYAVILRFDERLRAMAPERFV
                     RDILLDRLAMRELVIGEDHGFGRGRQGDVAMLRVLGARLGFAIDVVPPVRDPVAGIVS
                     SSRIRSAVAHGDLALARRLLGRPFALTAVVIQGARRGQSIGVPTINLPVPPRKMLPPD
                     GVYAVRVEWPGGRAGGMLNQGPRPTVGDLTRTIEAHVFDFDGDLYGQWAKIEWVARLR
                     DVQRFESLAALRQQLARDRIEALRVLQQNNRE"
     gene            4183..5823
                     /gene="secD"
                     /locus_tag="VGA78_04395"
     CDS             4183..5823
                     /gene="secD"
                     /locus_tag="VGA78_04395"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX9893135.1"
                     /translation="MQSIRNRLLLIGALVAIAVFYLFPRQVTIRERGQDGVMRDVRVT
                     RVPLKRGLDLQGGMHLALELDQDKRVSADPARDIQLALTVLRKRMDEFGVAEPVVQQS
                     GGDRIVVELAGLKEPGRAKNIVQKSAFLEFRITDKTGALEKAIPALDRILRGLGVQGG
                     AGAARGPSAVSKLLGDSAAPGDSAQAEDAGPGVLAGLIQPAGGATITPMPGAYMVPEA
                     AYPRVDSMLNLPQVRAALPRNIALHWMSQPLSAGVESYRLLYALEDRPIVTGTSLIDA
                     QAQLDPLTNGPIVVFELDRSGARRFGAETGRHVGDFMAILLDGLVQGQPPVIQSRIDR
                     RGQITLGNRTLVEAQDLALTLKAGALPVPLKIVEERQIGASLGQDAIRSGIIAGIIGT
                     LFVVLVMVGYYRLSGVLAVAALVFYFLFTLGGLAMLEATLTLPGLAGLVLSIGIAVDA
                     NVLIFERIREELELKKTVRLSVDEGFRNAMSAIIDSNVTTILTALFLFQFGTGPVRGF
                     AVTLVIGIVASMITAIFVTRTFFLIWLQRRPNLQTLSI"
     gene            5827..>6139
                     /locus_tag="VGA78_04400"
     CDS             5827..>6139
                     /locus_tag="VGA78_04400"
                     /inference="COORDINATES: protein motif:HMM:NF019187.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893136.1"
                     /translation="MRLFANANYDFLGSQRRAFPVFGVVILVGLILLLINGVNYSIEF
                     TGGTLVQIETKAPADVGAIRTALTAEGMPGAEIQQFGSNQEFVIRALTAKEGTDADDT
                     QA"
BASE COUNT          999 a         2013 c         2213 g          914 t
ORIGIN      
        1 tgcgcgagaa cgtgctcaag acgctggcgg gcatgcgggg caccagccgg aagcgccggg
       61 ccgatgagcc gtcctataga gagctgctgg ccggccgcgc ggcggaggag gcggaaaagg
      121 aaaagacccg catccgggtg aacgagttca tctcggtctc ggagctggcg gagatcatga
      181 aggtgccggc cacccagatc gtgcagttcg cgttcaagga gctgggcctg atggtgaccg
      241 tcaaccagcg gctcgacttc gaccagatcg agctgatcgc gtcggccttc gggttccagg
      301 cggtcaagga gagcgagtac atggccgagg cggaggaaac cgcccaggcc gtggaagagg
      361 aaagcagcct gcggccgcgg cccccggtgg tcaccatcat gggccacgtc gaccacggca
      421 agacctcgct gctggatcac attcgcaaag ccaacgtggt ggcgggcgag gcgggcggca
      481 tcacccagca catcggcgcc tatcacgtga cccggcccga tggccggaac atcacgttcc
      541 tcgatacccc gggccacgag gcgtttaccg ccatgcgggc ccggggcgcg caggtcaccg
      601 atatcgtggt gctggtggtc gcggccgatg accaggtgat gccccagacg gtggaagcga
      661 tcagtcacgc caagaacgcc ggcgtgcccc tgatcgtggc catcaacaag atcgatctgc
      721 ccacggccaa tgtggccaag gtcaaacagg atctgctgtc gcacaacgtg gtcttggagg
      781 acttcggcgg ccaggtgctg cacgcgccga tctccgccaa gaagggtacc ggcatcgacc
      841 agctgctgga gcaggtgctg ctgcaggccg aaatcctcga tctcaaggcc aaccccgaag
      901 ggccggttca cgccacggtc ctggaggcga ccctcgaccc gggcaagggg ccgatcgcca
      961 cggtgctgat ccagaagggt acccttcaca tcggggacta cttcatctgc ggccgctact
     1021 ccggccgggt ccgcgccctg ttcgacgagc ggggcaagaa cgtgaaggag gccggcccgt
     1081 cgatcccggt gcaggtgctc ggcttcgaag gggtcccggc cgcgggcgat gcgttcctgg
     1141 tggtggccga tgcgctggcc gcgcgcgaga tcgcgcagaa gcggcaacgg ctcgaccgcg
     1201 aagcccagaa ccgccggagc cagcggggag gcacgctgga ggacatctcc cgcgccctca
     1261 aggcgggcga agtctccggt ctgccgctca tcatcaaggc cgaccagggc ggcccggccg
     1321 aagcgctggc cgacgcgctg gcccagctgt ccaccggcga agtgcgggtc gacgtgattc
     1381 accgcggggt cggcgccatc accgagagcg acgtgctctt cgccaaggca tcgggcgcca
     1441 tcatcctggg attccacgtc cgacccgacg ccaacgcccg ggccgcggcg gaacgcgagt
     1501 cggtggacgt gcggacctac cgggtcatct acgaggcagt ggaagacgtc cgcaacgcgc
     1561 tcgaaggcct gctcaagccg gagcagaagg agatcgtgct gggtgaggcc gaggtgatgc
     1621 agatcttcaa gatcagcaag atcggcacca tcgcgggctg catggtccgg catgggacca
     1681 tcacccggac cgccaaggtc cgcgtggtgc gcgacggcac cgcggtctac accggcggtc
     1741 tcgccagcct caagcgcttc aaggatgacg tgaaggaagt gcgcgaaggg ctcgagtgcg
     1801 gcatcggggt ggagaattac aacgacttga aggtgggcga ccggatcgag tccttccggg
     1861 tcgaggccgt gaagcggacc ctcgagtcat cgtccgccgg agcgtgaggg aaccgtggtc
     1921 aaacggacct cgcaccggcc ggagcaggtc gcggagacgg tgcgccagac ggtcgccgac
     1981 ctgctcaccc gcgaggtgcg cgatccgcgc gtaagccggg taacggtgac cggagtgcgg
     2041 gtcaccgccg atctgtcgca tgccgaagtc cgggtcatcg tgggtgaccc ggcccaacag
     2101 gaacgggccc tggaagggct ccggagcgcc gcgggatttc tccggtcgaa ggtggctaaa
     2161 gcactgacga cccggatagt ccccgagctg gccttcgaga tcgatcgcgg gctggagcac
     2221 gcccaccgga tcgatacgct cttgagctcg ctcaagcgcc cgggaggcga accggcctga
     2281 ttggtggatt gctgattgac aagccggccg gccccacttc ccacgatgtg gtggcccggg
     2341 ttcgtcgtgc gctcggaacc cgggcggtcg gccacgccgg aaccctggat cccttcgcca
     2401 ccggcctgct ggtgctcctg atcggcggag cgacccggct ggcgcgattc gtcgagcggc
     2461 tgccgaaagg gtatctcgcc gaagcgaccc tgggcgctgc caccgatacc gacgacggca
     2521 ccgggcacgt gacggcgcgt cggccgctcg acccctggcc cggggagtcg gaaatccggg
     2581 tggcgctggc gtcgctggtc gggacccagc cgcagcgccc gccggcctat tcggcgagac
     2641 gggtggaggg gcggcgggga tacgagttgg cccggtcggg agcggcggtg gcacttccac
     2701 cccgcgacgt gacggtctac gggatcgagc tgctgcagtg gattcctccg gtcgtccagc
     2761 tccgggcgac ggtgtcggcc ggaacctatg tgcgggccct ggcccgcgat ctgggtgagc
     2821 gactcggcac ggtggcacac tgcagcgccc tccggcgcga gtggatcggg ccgtttcgga
     2881 ccgaggccgc gctggctccc gaccaggtga cggcccacac cccgctgctc tcgccgctcg
     2941 agctgctggc cgggatgccg caccaggtgc tcgaccccga cggcgccatc gcggtgcgcc
     3001 acggccggtc gctgccggcc gagccggagc cactcgaggg agaggtggcc ctggtctacg
     3061 agggtcggct cctggcagtg gcccaacggg tggagcaacg ctggcagccc cgcgtggtgt
     3121 tggagccggc gtgaccgcgg cgttgccgtt tcccccggcg ggcagtgtgg tgaccgtcgg
     3181 atcgttcgac ggagtccatg tcggacacgt cgccgtgttg cgcgaaatct cggagcgggc
     3241 ccgcgcggcc gggcgggtga gcgtgctggt gacgttcgag ccgcacccga tggaagtggt
     3301 gaacccgacg gcggcgccac cgctgctcac caccccggta gaacggcgcg agatcctggc
     3361 ccagaccgac ctggactacg ccgtcatcct gcggttcgac gagcggctgc gggcgatggc
     3421 cccggaacgg ttcgtgcgag acattctgct cgaccggctg gcgatgcggg agctggtgat
     3481 cggcgaagac catggcttcg gccggggccg gcagggcgac gtcgccatgc tgcgggtgct
     3541 gggggcccgg ctcggtttcg ccatcgatgt ggtgccgccg gtgcgcgatc cggtcgccgg
     3601 gatcgtgtcc agcagccgca tccgcagcgc ggtggcccat ggcgatctgg cgctggcccg
     3661 gcggttgtta ggccggccct tcgccctcac ggcggtggtg atccaggggg cgcggcgggg
     3721 ccagagcatc ggcgtgccga ccatcaacct gccggtcccg ccccgcaaaa tgctgccacc
     3781 cgatggggtg tacgcggtac gggtggagtg gccgggggga cgggccggcg gcatgctcaa
     3841 ccaggggccc cggcccacgg tgggcgacct gacccggacc atcgaggcgc atgtgttcga
     3901 cttcgacggc gacctgtacg ggcaatgggc gaagatcgaa tgggtggccc ggctgcgcga
     3961 tgtgcaacgg ttcgaatcgc tcgctgccct gcggcagcag ctggcacgcg accggatcga
     4021 ggcgctcagg gtcctgcagc aaaacaacag ggagtaggaa gcaggaagta gggagcaggg
     4081 agcatgaagc agggagcagg aagcagggag caggaagcag ggagcaggaa gcagggagca
     4141 ggaagcaaca ggttcggaac tcgcgactgg tgaggcaacg agatgcagtc catcagaaac
     4201 agactcctcc tgatcggcgc gctggtggcg atcgcggtgt tctatctatt cccgcgccag
     4261 gtcaccattc gggagcgggg ccaggatggg gtgatgcggg acgtccgggt gacccgggtg
     4321 ccgctcaagc gcgggctcga tctgcagggc ggcatgcacc tggccctgga gctcgatcag
     4381 gataagcggg tgtcggccga tccggcccgt gacatccagc tcgccctcac ggtgctgcgc
     4441 aagcggatgg acgaattcgg ggtggccgag ccggtggtcc agcagtccgg cggtgatcgg
     4501 atcgtggtgg agctggccgg gctcaaggag ccgggccggg ccaagaacat cgtgcagaag
     4561 agcgccttcc tcgagttccg gatcaccgac aagaccggcg cgctggagaa agccattccc
     4621 gcgctcgatc ggatcctgcg cggcctgggg gtgcagggcg gcgccggcgc ggcgcggggg
     4681 ccgtccgcgg tgagcaagct gctgggcgac tccgccgcgc caggcgactc ggcccaggcg
     4741 gaagacgccg gccccggggt gctggccggt ctgatccagc cggccggcgg cgccacgatc
     4801 accccgatgc cgggcgccta catggtgccc gaggcggcgt atccccgggt cgacagcatg
     4861 ctgaacctcc cccaggtccg cgccgcgctg ccccggaaca tcgcgctcca ttggatgagc
     4921 cagccgcttt cggccggggt ggagagctat cggctgctct acgccctgga ggaccggccc
     4981 atcgtgaccg gcaccagcct gatcgacgcc caggcccagc tcgatccgct caccaatgga
     5041 cccatcgtgg tgttcgagct ggaccgctcc ggcgcccgtc gcttcggggc cgagaccgga
     5101 cgccacgtcg gcgacttcat ggcgatcctg ctcgacgggc tggtccaggg ccagccgccg
     5161 gtcatccaga gccggatcga ccgccggggc cagatcacgt taggcaaccg gaccctggtc
     5221 gaagcgcagg acctggccct gaccctcaag gccggcgccc tgccggtccc cctcaagatc
     5281 gtggaagagc gccagatcgg cgccagcctg ggccaggacg ccatccggtc ggggatcatc
     5341 gccgggatca tcggcaccct gttcgtggtt ttggtcatgg tcggctacta ccggctctcg
     5401 ggtgtcctgg cggtggccgc gctggtcttc tacttcctct tcaccctggg cggcctggcg
     5461 atgctggagg ctaccctcac gcttccgggg ctggccggcc tggtgctctc gatcgggatt
     5521 gcggtcgacg ccaacgtgct gatcttcgag cggatccggg aagagctgga gctcaagaag
     5581 acggtccggc tctcggtgga cgagggcttc cgcaacgcga tgagcgccat tatcgactcc
     5641 aacgtgacca ccatcctcac cgccctgttc ctgttccagt tcggcaccgg cccggtgcgg
     5701 ggctttgcgg tcacgctggt gatcggtatc gtcgcctcga tgatcaccgc catcttcgtg
     5761 acccggacct tcttcctcat ctggctgcag cggcggccca acctgcagac cctgagcatc
     5821 tgacccatgc gcctctttgc caacgccaat tacgactttc tgggcagcca gcggcgcgcc
     5881 tttcccgtgt tcggcgtcgt cattctggtg ggcctgatcc tgttgctcat caacggggtg
     5941 aactacagca tcgagttcac cggcgggacc ctggtgcaga tcgagaccaa ggccccggcc
     6001 gacgtcgggg cgatccggac ggctctcact gcagagggga tgccgggcgc cgagatccag
     6061 caattcggct ccaatcagga gttcgtgatc cgggccctga ccgccaagga agggaccgac
     6121 gccgacgaca cccaggcga
//
LOCUS       DASWKS010000147         7337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2661142, whole genome shotgun sequence.
ACCESSION   DASWKS010000147 DASWKS010000000
VERSION     DASWKS010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7337
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2661142"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1094)
                     /locus_tag="VGA78_04405"
     CDS             complement(<1..1094)
                     /locus_tag="VGA78_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893137.1"
                     /translation="MVRLVTNEAAAMYSTCLFCHAPLGRNTTLEYSPHGRRFAFDRTR
                     GRLWVICRTCHRWNLTPFEDRWEIIDECERRFRATQVRLSTDNIGLARLGDGTDLVRV
                     GQPLRPEFAAWRYGRAFLSRRPLRAIHTLGGAGLLAAPVFLGALFGPVAPLALAGAAA
                     VGAWRLTRRVAVSIDLSGAAELRLSTSQIQGAELIPDGASPDGWALLLDHLEDPNPLR
                     RIGLSQRFAAERAVLTGLEARAAVTFVLPRLNPAGGSPGEVAEAVRWLEAVRGSDRAF
                     ATIARSHHVRPTLDSHKATLASMHTEVRLALEMAVHEEEEQRLLRGELSILERAWQRE
                     ERLAAIADRLTVPEGVERQLADLRLAARRDP"
     gene            complement(1308..4727)
                     /locus_tag="VGA78_04410"
     CDS             complement(1308..4727)
                     /locus_tag="VGA78_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEX9893138.1"
                     /translation="MERYRPSQHVRIVTAASLFDGHDAAINIMRRLLQATGAEVIHLG
                     HNRSAAEIVECAIQEDAQGIAVTSYQGGHLEFFKYMYDLLKERGARVKIFGGGGGTIL
                     PVEVEELHRYGIARIYTPDDGRAMGLQGMIDDVVRQCDFPTRAPQLDGHVGRLSVYDH
                     RTIAGLISLAENHPELVDRLREGLTPIVATRKTPVLGVTGTGGAGKSSLVDELVRRFL
                     ADFPDRTVAIVSVDPSKRKTGGALLGDRIRMNAIFTPRVYMRSLATRQSNLALSRHVQ
                     DAVDICKAAGFDLVVIETSGIGQSDTEITEHANVSLYVMTADYGAATQLEKIDMLDFA
                     DLVAINKFDKRGSLDALRDVRKQYRRNHNRFEDPEDRLPIVGTIASQFNDPGMNALYR
                     LAMDTLATRTGAPFGGEASAHARLTADRSAVIPPERTRYLAEIADVVDREAEFITQQS
                     ERARRLYQLHGAVRALQGAGSGEQGADSILPDLAPRPDDPEAVRLLIAEYQKGLGGLD
                     PLCRTLLGSWPETVARYRAPTYQYRVRDRVLEQPLFTETLSHLRIPRVSLPRFHDWGD
                     LLAWMLRENLPGEYPFTGGVFPLKRENEDPARQFAGEGGPERTNRRFHYLSRGMPAKR
                     LSTAFDSVTLYGEDPARRPDIYGKVGNSGVSIATVDDAKKLYSGFDLRDPATSVSMTI
                     NGPAPMVLGFFLNAAIDQACERWILAEGRRDEVERRVAELFRAKGMEPPRYQGDLPQG
                     HDGVGLLLLGVSGDQVLPRETYQRIRAETLSVVRGTVQADILKEDQAQNTCIFSAEFA
                     LRMMGDIQRYFIDHKIRNFYSVSISGYHIAEAGANPISQLAFTLANGFTFVEYYLSRG
                     MTVDDFAPNLSFFFSNGMDPEYSVIGRVARRIWARAMRHLYRGNERSQKLKYHIQTSG
                     RSLHAQEISFNDIRTTLQALTAIYDNCNSLHTNAYDEAITTPTEESVRRALAIQLIIN
                     QEHGLARNENPLQGSFIVEELTDLVEDAVLREFRALSERGGVLGAMERMYQRGKIQDE
                     SLYYEERKHAGSLPVVGVNTFLDPAGSPTIVPREVIRSSAEEKEYAIASVAAFQQSHA
                     ELGPPALDRLRDAALHGGNTFEQLMEATKVCSLGQISAALYEVGGQYRRSM"
     gene            4928..6079
                     /locus_tag="VGA78_04415"
     CDS             4928..6079
                     /locus_tag="VGA78_04415"
                     /inference="COORDINATES: protein motif:HMM:NF037526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893139.1"
                     /translation="MSLTDVNKQLQRLTRIRGGRHPIVSCYLKLEPRDRARGKYLIKL
                     KNRIRNVQENLPALGFSNSDREAVVTDLALIYRDLERTGSLPNTQGIALFASSGLGLF
                     ERVPLPTVHRSRLVVDRTPLVRELLAAEDEVGRLLTVVMDRTKARIFEVTAFNARELT
                     GIHAEATRGGKFHSDRHGAPGMGEHAWHNRIRNEKQRHLTAVADALFQLDRKQPVHGV
                     VLAGNGTDASALEPFLHTYLRQRVMGTVKLNPKHISEGRVHAATLEARAQHERHAEEL
                     LARELEDGLGTGWAVKGVRETLQALAAGKVRTILVDADAEASGYRCASGRLVLTEKDC
                     RGDGPGTPVPDLVDEALEEALRQRVTVEVLHSPEAAQHVAGLAGLLRFR"
     gene            6079..6507
                     /locus_tag="VGA78_04420"
     CDS             6079..6507
                     /locus_tag="VGA78_04420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HEX9893140.1"
                     /translation="MPAARSRPIRVLVAKPGLDGHDRGAKVVAAALRDAGMEVIYTGL
                     HQTPEMIARAAVQEDADVVGLSILSGAHMTLFPRVRQLLTELGRPDILLTGGGIIPPD
                     DMTALQQQGVGRLFGPGTPTGDLVTYIREWAAARPDRIAS"
     gene            6504..>7337
                     /locus_tag="VGA78_04425"
     CDS             6504..>7337
                     /locus_tag="VGA78_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9893141.1"
                     /translation="MIQPQKSAGAGRLRALTQEFQTLAAKLRQGGGPERVARMHARGQ
                     LAPRERVQRLLDPDSPWYEIGLLIAWDRYEGQAPAAGVITGIGLVEGREVVVVANDAT
                     VKAGSWWPETIPKMLRAQEVAMRQRIPIVYLVDSAGVNLPYQGGVFPGQYGAARLFYY
                     NSIMRRYLHVPQIAAVMGSCVAGGAYLPALSNVIFMVEGTSFMGLGGPNLVKGATGQT
                     VDAETLGGARTHTERSGVAHYRAANDGDCLKQIREYLARLPRAGGVQHQVRPSRPPAR
                     PP"
BASE COUNT         1185 a         2445 c         2524 g         1183 t
ORIGIN      
        1 gggtcccggc gggccgcgag gcggaggtcc gccagctgac gctcgacgcc ctcggggacc
       61 gttaggcgat cggcgatagc ggccaaccgc tcctcccgct gccaggcccg ctccaggatg
      121 gaaagctcgc cccgcagcaa ccgctgctcc tcttcctcgt ggaccgccat ctccagcgcc
      181 agacggactt cggtatgcat cgaggccagc gtggctttgt ggctgtcgag cgtggggcgg
      241 acgtggtggg aacgggcgat agtcgcgaag gcccggtccg agccgcgaac cgcttcgagc
      301 caccgtaccg cttcggccac ctcgcctggg cttcctccag cgggattgag gcgcggcagg
      361 acgaaggtga cggccgcgcg ggcttcgagc ccggtcagga ccgcccgctc ggcggcgaag
      421 cgctgactga gtccgatgcg gcgcagcgga ttggggtctt ccagatgatc gagcagcagg
      481 gcccagccgt ccggggatgc tccatcggga atcagctccg ccccctggat ctgactggtt
      541 gagagtcgca gctcggccgc gccggacagg tcgatgctga ccgcgacacg gcgggtgagg
      601 cgccatgccc cgacggccgc ggcaccggcc agggccagcg gcgccacggg gccgaagagt
      661 gcgcccagga acaccggggc ggccaagaga cccgcgcctc ccagcgtgtg aatcgcccgg
      721 agcgggcggc gtgacagaaa cgcacgcccg tagcgccacg ccgcgaactc cggtctcaac
      781 ggctgcccca cccggaccag gtcggtcccg tcgcccagtc gcgccagccc gatgttgtcg
      841 gtggacagac gcacctgcgt cgcgcggaac cggcgctcgc attcgtcgat gatctcccag
      901 cggtcttcga acggtgtcag gttccaacgg tgacaggtcc ggcagatgac ccagaggcgg
      961 ccccgggtcc ggtcgaaggc gaaccggcgc ccgtgcggcg agtattccag ggtggtgttg
     1021 cggcccaggg gagcgtggca gaagaggcag gtggaataca tcgcggcagc ctcgttcgtg
     1081 acgaggcgta ccataccggc gtctctgggg ccggagaatc cccggcccga tctgtcatgc
     1141 tttcgtaatg cggctgcaat gttgggggcc ggggggtgcc ggggacttgt tgccgaccta
     1201 ggcaaccgtc aggtgacacg cgagcacgtt gtgaacaatc ggggcatcgg tggcatccgc
     1261 ggataacatc ccaactgatt catccgcaga ttacgccgat gaccaagcta catgctccgg
     1321 cgatattgcc caccgacctc gtataacgcc gccgagatct ggcccaggga gcagactttg
     1381 gtggcttcca tcagctgctc gaaggtattg ccgccgtgca gggccgcgtc ccgcaaccgg
     1441 tccagcgcgg gtggacccag ctccgcgtgg ctctgctgga atgccgcgac cgaagcaatg
     1501 gcgtactcct tctcctcggc gctcgagcgg atcacttccc gaggaacgat ggtgggggag
     1561 cccgccggat cgaggaaggt gttgacgccc accaccggaa gcgatcccgc gtgcttgcgt
     1621 tcttcgtagt agagcgattc gtcctggatc ttcccccgct gatacatgcg ttccatggcg
     1681 cccagcacgc cgccccgctc cgagagggcc cggaactcgc gcagcacggc gtcttccacc
     1741 aggtcggtca gctcctccac gataaacgag ccctgcaacg gattctcgtt ccgggccagc
     1801 ccgtgttcct ggttgatgat cagctggatg gcgagggccc ggcgcacgct ttcctcggtg
     1861 ggcgtggtga tcgcctcgtc gtaggcgttg gtgtgcagcg agttgcagtt gtcgtaaatg
     1921 gcggtgagcg cctgcagcgt ggtccggatg tcgttgaagg agatctcctg ggcatgcagg
     1981 ctccggcccg aggtctggat gtggtacttg agcttctgag accgctcgtt gccgcggtac
     2041 agatgccgca tggcgcgggc ccagatccgc cgggccaccc ggccgatcac cgagtactcc
     2101 gggtccatgc cgttggagaa gaagaaggac aggttggggg cgaagtcgtc gaccgtcatg
     2161 ccgcgcgaca ggtagtactc gacgaaggtg aatccgttgg ccagggtgaa cgccagctgg
     2221 ctgatgggat tggcgcccgc ctcggcgata tggtacccgg agatggagac cgagtagaaa
     2281 ttccggatct tgtggtcgat gaagtaccgc tggatgtccc ccatcatccg gagcgcgaac
     2341 tcggccgaga agatgcaggt gttctgggcc tggtcttcct tgaggatgtc ggcctggacc
     2401 gtgccgcgga ccaccgagag ggtctcggcc cggatccgct ggtaggtctc gcgcggcagc
     2461 acctgatcgc cggacacccc gagcagcagc agccccaccc catcgtgtcc ctggggcaag
     2521 tcaccctggt atcggggcgg ctccatgccc ttggcgcgga acagctccgc gacccgccgc
     2581 tccacctcgt cacgccgccc ttcggccagg atccaccgct cgcaggcctg gtcgatcgcc
     2641 gcgttgagga agaaacccag gaccatgggt gccggaccgt tgatggtcat gctcaccgag
     2701 gtcgcgggat cgcgcaggtc gaacccgctg tagagcttct tggcgtcgtc caccgtggcg
     2761 atgctgacgc cgctgttgcc gaccttgccg tagatgtcgg gccgccgggc cggatcctcg
     2821 ccgtacagcg tcaccgagtc gaaggcagtc gagagccgct tggccggcat cccgcgcgag
     2881 aggtagtgga accgccggtt ggtccgctcc ggcccgccct cgcccgcgaa ctggcgggcc
     2941 gggtcttcgt tctcgcgctt gagggggaag accccgccgg tgaagggata ctcgcccggc
     3001 agattctccc gcagcatcca cgccagcagg tcgccccaat cgtggaagcg ggggagactc
     3061 actcggggga tgcgaaggtg cgagagcgtc tcggtgaaga gcggctgctc cagtacccgg
     3121 tcccggaccc gatactgata ggttggagcc cggtagcgcg ctaccgtctc gggccacgaa
     3181 ccgagcaggg tgcggcagag gggatcgagg ccgccgagtc ccttctggta ttcggcaatc
     3241 agcaatcgaa cggcttcggg gtcatcgggc cggggggcca agtccggaag tatcgagtca
     3301 gctccctgct ccccgcttcc tgctccctgc agtgcccgta cagcgccatg caactggtag
     3361 agccgccgcg cccgctccga ttgctgggtg atgaactccg cctcccggtc caccacgtcc
     3421 gcaatctcgg ccaaataccg ggtccgctcg ggggggatca ccgccgaccg gtcggccgtc
     3481 agccgggcgt gggcggaagc ttcgccgccg aagggggcgc cggtccgggt ggccagcgtg
     3541 tccatcgcca ggcggtacag ggcgttcatg cccggatcgt tgaactggga ggcgatggtt
     3601 cccacgatgg ggagccggtc ctccgggtct tcgaaccggt tgtgattgcg gcgatactgc
     3661 ttgcgcacgt cccgcagggc gtcgagcgaa ccgcgcttgt cgaacttgtt gatggcgacg
     3721 agatcggcga aatccagcat gtcgatcttc tcgagctggg tcgcggcgcc gtaatcggcc
     3781 gtcatcacgt agagcgagac attggcgtgc tcggtaatct cggtgtccga ctggccgatg
     3841 cccgaggtct cgatcaccac caggtcgaat cccgcggctt tgcagatgtc caccgcatcc
     3901 tgcacatggc gcgagagcgc caggttggac tggcgcgtcg ccagcgaccg catgtagacc
     3961 cgcggggtga agatcgcgtt catccggatc cggtcaccca ggagcgcgcc gccggtcttc
     4021 cgcttggagg gatcgaccga gacgatggcc acggtgcgat cggggaaatc cgccagaaaa
     4081 cgccgcacca gctcgtcgac cagcgaggat ttaccggcgc cgcccgttcc cgtgacgccg
     4141 aggaccgggg tcttccgggt cgccacgatg ggcgtgagcc cctcccgcag ccggtccacc
     4201 agctcgggat ggttctcggc caggctgatc agccccgcga tggtacggtg gtcatagacc
     4261 gacagccggc ccacatggcc atcgagctgg ggcgcccggg tggggaaatc gcactgccgc
     4321 accacgtcgt cgatcatgcc ctgcagtccc atggcccggc catcgtccgg ggtatagatc
     4381 cgcgcgatgc cgtagcggtg cagctcctcg acttcgacgg gcaggatggt ccctccgcct
     4441 ccgccgaaga tcttgacccg cgcgccccgc tccttgagca ggtcgtacat gtacttgaag
     4501 aactcgaggt ggccgccctg ataggaggtc acggcgatac cctgcgcgtc ttcctggatg
     4561 gcgcattcca cgatttcggc ggccgatcgg ttgtggccca ggtgaatgac ttccgccccg
     4621 gtggcctgga gcagccgccg catgatgttg atcgccgcgt cgtggccgtc gaacagggac
     4681 gcggcggtca cgatccggac gtgctgggag gggcgatagc gttccatagg agtcacaagt
     4741 cgcgtgtctc gcgtcgcgag agagccggtt gccatcccgt gaatctagcg taagcggacc
     4801 cgaattgcat ccgaaccgcg tgctgtaagc cttgatgaat caatgtgatg cgactatgct
     4861 gctcgatgca ggtcgggtcg ttctcgcgac gcgcgatgac tgcctcgcga atgcatgtgg
     4921 agagtccatg agcctgaccg atgtcaacaa acagttgcag cggctcaccc ggatccgggg
     4981 cggccgccat cccatagtca gctgctacct caagctcgag ccgcgcgacc gagcccgggg
     5041 caagtatctc atcaagctca agaaccggat ccggaacgtc caggagaacc tgccggcgct
     5101 ggggttcagc aacagcgacc gcgaggcggt cgtcacggat ctggcactca tctaccggga
     5161 cctggagcgc accgggtccc tgcccaacac ccaggggatt gctctgttcg cctcctccgg
     5221 cctgggactg ttcgagcggg tgccgctgcc cacagtgcac cggtcgcgcc tggtggtcga
     5281 tcgcaccccg ctggtacgcg agctgctggc cgccgaggat gaggtgggac ggttgctcac
     5341 cgtggtgatg gatcgaacca aggcccggat tttcgaagtc accgccttca acgcccggga
     5401 gctgaccggg atccacgccg aggccacccg gggcgggaag ttccactccg accggcatgg
     5461 cgcgccaggt atgggcgagc acgcctggca caaccggatc cggaacgaga agcagcgcca
     5521 cctgaccgcg gtggccgacg cccttttcca gctcgaccgc aaacagccgg tgcacggcgt
     5581 ggtcctggcc ggcaacggca ccgacgcctc ggcgctcgag ccgttcctgc acacctacct
     5641 tcggcagcgg gtgatgggaa ccgtgaagct caatcccaag cacatctccg aaggccgcgt
     5701 tcatgccgcg accctcgaag cgcgcgccca gcacgaacgg cacgccgagg agttgctggc
     5761 ccgggagctg gaggacggcc tgggtaccgg ttgggccgtc aaaggggtgc gcgagacctt
     5821 gcaggcgctg gccgccggga aggtccgcac cattctggtc gacgccgacg cggaagcctc
     5881 gggctaccgc tgcgcctcgg ggcggctggt gctgaccgag aaagactgtc gcggggacgg
     5941 tcccggtacg ccggtcccgg atctggtgga tgaagcgttg gaagaggcgc tgcgccagcg
     6001 ggtcaccgtg gaggtgctgc attcgccgga ggcggcgcag cacgtcgccg gcctcgcggg
     6061 gttgctccga ttccggtaat gccggccgcg cgctcccgcc ccatccgggt gctggtggcg
     6121 aagccgggac tcgatgggca cgaccgcggc gctaaggtcg tggctgccgc tctgcgggat
     6181 gccgggatgg aagtgatcta taccggcctg caccagacgc ccgaaatgat cgcgcgggcc
     6241 gcggtgcagg aggacgccga tgtggtcggg ctctcgatcc tctccggcgc tcacatgacc
     6301 ctgtttccca gagtgcgcca gctcctcacc gagctgggcc gtcccgacat cctgctcacc
     6361 ggcggtggca tcattccgcc cgacgacatg accgcgctgc agcaacaggg ggtgggccgg
     6421 ttgttcggtc ccggcacgcc caccggtgac ctggtgacct atatccggga atgggccgcc
     6481 gcccggcccg accgcatcgc ctcgtgatcc aaccccagaa gagcgccgga gccggccgct
     6541 tgcgcgccct cacccaggaa ttccagacgc tggcggccaa gctccgccag ggaggcggtc
     6601 ctgagcgggt ggcccggatg cacgcccggg gccagctcgc gccgcgagag cgggtgcaga
     6661 ggctgctcga ccccgactcg ccctggtacg agatcgggtt gctgatcgcc tgggaccgct
     6721 acgagggcca ggccccggcc gcgggcgtca tcaccgggat cggcctggtg gaagggcggg
     6781 aagtggtcgt ggtggccaac gatgccactg tgaaggccgg atcctggtgg ccggagacca
     6841 tccccaagat gctgcgggcc caggaggtcg cgatgcgcca gcgcatcccg atcgtctacc
     6901 tggtggacag cgccggggtc aatctgccct atcagggcgg cgtgttcccc ggccagtacg
     6961 gcgctgcccg gctgttttac tacaactcca tcatgcgccg gtatctccac gtcccccaga
     7021 tcgccgcggt gatgggcagc tgcgtggcgg gcggcgccta cctcccggcg ctctcgaacg
     7081 tgatcttcat ggtggagggg accagcttca tgggcctggg aggccccaat ctggtgaagg
     7141 gcgccaccgg ccagacggtc gatgcagaaa cgttaggcgg cgcccgaacc cacaccgaac
     7201 gctccggcgt cgcgcactac cgtgccgcca acgatgggga ttgcctgaag cagatccggg
     7261 aatacctggc ccggctgccc cgagccggcg gcgtccaaca ccaggtgcgg ccctcccgcc
     7321 cgccggcccg cccgccc
//
LOCUS       DASWKS010000148        11248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2300849, whole genome shotgun sequence.
ACCESSION   DASWKS010000148 DASWKS010000000
VERSION     DASWKS010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2300849"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1847
                     /locus_tag="VGA78_04430"
     CDS             150..1847
                     /locus_tag="VGA78_04430"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEX9893142.1"
                     /translation="MHRFVLAVLVLLPAPCSPLPAQALRDTVERYTLDREALSRRYAV
                     EYDAGRRQRYQRFCAEWQKRLEAIAYDRLDVEGRIDWQLLANAVRRELALLELEARRA
                     GEMRRLVPFGDAIMGLMETRRRLETVKPRETSATLAHLARQIDTLRTGMEAGEDRDTA
                     RAARIIALRGVGLIDALRGTLTDWYRYYEGYDPVFTWWNADPWKRADSALVKYARTLR
                     RQVIGQKDGEDEPIIGDPIGADALRAELAFELIPYGPEDLLRIAEREFAWCEAEMQKA
                     TRELGQGADWKAALEQVKNTYVEPGRQTDLVRDLAREATEYVESRGLVTVPPLAKEIW
                     RMEMLSPERQKVSPFFLGGEVIQVSYPTDEMSAEDKLMSLRGNNPHFSRATVHHELIP
                     GHHLQRFMTRRYMSHRQEFSTPFWTEGWALYWEMRLWDLGFPRGPEDRVGMLFWRMHR
                     AARIIFSLRFHMGTMTPQQAIDFLVDRVGHERANATAEVRRSFNGSYPPLYQLAYMIG
                     GLQFRALHRELVTNGRMSERAFHDAVLQGGNMPVEMVRARLLQTSLARDYRARWLFE"
     gene            2091..3260
                     /locus_tag="VGA78_04435"
     CDS             2091..3260
                     /locus_tag="VGA78_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893143.1"
                     /translation="MRTPPGLLAIAVLASVSGPLAAQRGRDREKDQDRPPDTSPGHGL
                     LNLGIGHTGLSFGNSSRWNGLRINFRDRGVQQINGINLTLWKAADRANPEARLYGLQI
                     GLVGPEGAYLRGVSLGLGAVASQQMAGVNLGLLGLVSEGEIYGINVGGLGLVAEGAAV
                     GLNIGGLGAVTQGGMDGINLGGLGLVAERDLRGLNVGGLGVVAQGAMTGLNLGGLAVV
                     AEDGLLGVNLGGLALVTQGSLRYLSLAGMALVAEGRVEGINLGGLALVGGDNVTGLNL
                     AGLALVGDDHVRGLTVAGLALVANTRMSGVGLTLGRIVADETRGATIAGWLKTWDMGG
                     LAISPYTQIKGPQRGLAIGIFNTADELHGLQIGVLNRAKNNRGITQWLPLFNFHK"
     gene            complement(3251..4636)
                     /locus_tag="VGA78_04440"
     CDS             complement(3251..4636)
                     /locus_tag="VGA78_04440"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893144.1"
                     /translation="MRAGRRAGGRADSYGRWPGLLLSLLSLTAGPPARLSASPAARLP
                     AQTPRDTGTVVLRAGRLFDSERGVFLTNQQILVQGRTIRAVGSTVTAPAGARVIDLSG
                     ATMLPGLIDAHTHLLYLEHPKGDLTSEGMKAVVLEGTALRALRGAARGRTFLAAGITT
                     VRDLGNSGRFGDVALMRAIEEGSVDGPRMIASGPGLSPIGGQFPGLQPAWQSIAAEEY
                     RVVRNAEDAADAVRENVTLGARVIKIYSNNTPNPGSFSDAELAAIVESARRHGVKVAA
                     HATSDAAVYRAARAGVNSIEHAYQVTDSTLALMAKNGVMMVPTDMDTLSLERYLRQSG
                     QYDTTRFRQFLGMLSPQQDRVRRAIRAGVTIAAGSDNYLDMGVPQGSAAIRNLFAYRA
                     AGMTPAQVLQAATISDARLLGMEGQLGVIKAGALAFTWTDRRSDGLTAGRTGSRSVGQ
                     SVGRSVGPSYL"
     gene            complement(4633..6507)
                     /locus_tag="VGA78_04445"
     CDS             complement(4633..6507)
                     /locus_tag="VGA78_04445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9893145.1"
                     /translation="MPLHTILRTMLVAAVLLPAGPPARLPAQRASERFSRQDVMVPMR
                     DGTKLNTEIYVPKQATGPLPILLTRTPYGLGHDQDGFSPALTSSYGELAEDGYIFVFQ
                     DIRGRFKSEGQFVMLRPPRDPKDRKAIDEGTDTYDTIEWVLKTLPGHNGRVGMLGISY
                     GGWLTVMAMLDPHPALKAVSPQASPADMWLGDDFHHNGAFRLSYGFEYATLMETTKET
                     TPFAFDEHDTYEWFLKVGSLANINARYLQQKIPTWNDYVQHADYDGFWQRQGVARYLT
                     RVTVPTLNVAGWWDQEDFYGPLKIYELLEKHDANRRNSIVVGPWNHGGWARGEGEQLG
                     RIKFGVPSSKYYRQEIQRPWFAHYLRDGADPKVPEALVFETGANRWVSYETWPPTRVS
                     TTRRLYFHPQGKLSFEPPSDTTRNAHDAYVSDPNRPVPYRARPILPLYGGGSNWPVWL
                     VDDQRHAHLRPDVLSYESEPLAEEVVVSGNVLANLFISTSGSDGDWIVKLIDVYPEKY
                     QAEPAMSGYQLMVANEVMRARYRNSWEKPEALVPDQVTPLTVDLRHANHRFRKGHRIM
                     VQVQNTWFPLIDRNPQTFVPNIFLAKDSDFRAATHRVFRSAAQASHLALPVVSGQMTP
                     "
     gene            complement(6846..8018)
                     /locus_tag="VGA78_04450"
     CDS             complement(6846..8018)
                     /locus_tag="VGA78_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX9893146.1"
                     /translation="MTFLARLIKVVLLLAVIALIGFFTVVAGYADRQRNRVSRVPLPP
                     VDSATRALHAELNIVDLHADPLLWARDLTQRNTHGHVDVPRLIEGNVAVQLFGVVTQV
                     PPGQNYQSNPADRDRLWMLVAASRWPVETWNNLLQRALYQASRLEQASRDSRGTVVLI
                     RSRQELESFVRIRARDNQRLVGGILAVEGLHALGGNLARLDTLFSAGFRVAGLTHFFD
                     NELGGSSAGLAKTGLSAFGREVVRRMEELGMVVDLAHASPQLIDEVLAVARKPVIVSH
                     TGVQATCPGPRNLSDSAIRRIAANGGVIGIGFWDAAVCDISPAGIAKALRHVVGLVGA
                     QHVALGSDFDGATTTAFDVSQMGQITQALKDARFTQPEIRGIMGENALRVLGSGLP"
     gene            8234..8815
                     /locus_tag="VGA78_04455"
     CDS             8234..8815
                     /locus_tag="VGA78_04455"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893147.1"
                     /translation="MCARGSDWFADIFAEFDPERWAHKWSREWGPGRGRRRSQVFESG
                     EMKYVILRLLREKPRHGYEVIKEIEERFGGWYTPSPGTVYPTLQLLEDQGLVRVVETE
                     GRKTYHITPEGETFLDNHRDTIDEIFDRVRETVRDFTGGAMGELSQAFTRLAAVAWRD
                     AWRHGPGDPHTRRIVEILNKAADDIKALRDQPV"
     gene            8835..9086
                     /locus_tag="VGA78_04460"
     CDS             8835..9086
                     /locus_tag="VGA78_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893148.1"
                     /translation="MIWAFFGLMMALMWSRRWHGDWSGRGSRRKLGQEYERRIEALES
                     DVTSREETISMLESRVTELESRLDFTERLLMQKTGVAAE"
     gene            9289..10188
                     /locus_tag="VGA78_04465"
     CDS             9289..10188
                     /locus_tag="VGA78_04465"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9893149.1"
                     /translation="MRKAYGTVVAVDGLDLEVPTGECFGLLGPNGAGKTTTIEICEGL
                     NRPDTGEVEILGRRWSTDERELRERIGISLQETQLAEKITVAETINLFRSFYRAPRPL
                     DEVIDAVQLGEKRNGRVGQLSGGQKQRLALALGLVSDPELFFLDEPTTGLDPQSRRQI
                     WELIRSFQIRGRTVLITTHYMEEAEHLCHRVAVVDHGKVIALGTPRELIASLGAQYVV
                     EFGLADGSALAAEALSGLPGVVGVRQEEDRWRLQVAELHTVMPALLGLLDGRGMPLTE
                     LRTHAPTLEDVFVSLTGRHLRDA"
     gene            10181..11236
                     /locus_tag="VGA78_04470"
     CDS             10181..11236
                     /locus_tag="VGA78_04470"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893150.1"
                     /translation="MPETGRSWRERPLARLTLVRYLEFVREPEAMFWVFVFPVLLTAG
                     LGIAFRSKPQDQIKLGVLETPRAEALTASLAQDPRVLVQRLDDSAGARALRTGKIALL
                     VVTSGDGVVYRFDETRPDARMARQVTDDILQRKAGRADPVAVREEQVRERGSRYIDFL
                     VPGLLGMNLMGTGIWGVGFAIVDQRRKKLLKRLISTPMSRGQYLLSFMLSRLIWLVLE
                     VAALVGFGLLVFGVPLRGSVPTLLLVCLLSAFAFSGLGLMIAARPRTIEAASGLMNLA
                     MMPMWVFSGVFFNSGNFPDVMQPFIQALPLTAVVDALRATMLEGASLVTLAPELAVVG
                     LWMVASFAIALKIFRWQ"
BASE COUNT         1884 a         3648 c         3790 g         1926 t
ORIGIN      
        1 gcccgagaac ctcgtggccc agaccggatt catgcagggc gcggccggcg tgggaaccgt
       61 cctgctccac ctcgatgccg cggaacgaaa agaagactgg tccatcacat tccccgattc
      121 ccccttctga cccggaattg atcggtttca tgcatcgctt cgtgctggct gtgctcgtcc
      181 tgctccctgc tccctgctcc cccctccccg cccaggcgct ccgcgacacc gtcgagcgct
      241 acaccctcga ccgggaggcg ctctcgcgcc gctacgcggt ggagtacgac gcggggaggc
      301 gccagcgcta ccagcggttt tgcgccgagt ggcagaaacg gctcgaggcc atcgcctacg
      361 atcgcctcga tgtcgagggc cggatcgact ggcaattgct ggccaacgcg gtgcgccgcg
      421 agctggcgct actggagctc gaggcccggc gcgccggtga gatgcggcgc ttggtgccgt
      481 tcggcgatgc catcatgggc ctgatggaga cccggcgccg gctcgagacc gtgaagccgc
      541 gcgaaacctc ggccacactc gcccatctgg cccgacagat cgacacgttg cggaccggga
      601 tggaggcggg agaggaccgg gacaccgcgc gggccgcgcg catcatcgcg ctcagaggcg
      661 taggcctgat cgacgcgctc cgcggtaccc tcaccgactg gtatcggtac tacgagggat
      721 acgatccggt ctttacctgg tggaatgcgg atccctggaa gcgggccgat tcggcgctgg
      781 tgaaatacgc ccgcactctg cgacgccagg tgatcggaca gaaagacggg gaagacgaac
      841 ccatcatcgg cgatcccatc ggcgccgacg cgctgcgggc cgagctggcg ttcgagctca
      901 ttccctacgg acccgaggat ctgctccgga tcgcggagcg cgagttcgcc tggtgtgaag
      961 cggaaatgca gaaggctacg cgcgagctgg gccaaggcgc cgactggaag gcggccctgg
     1021 aacaggtgaa gaacacctac gtggaaccgg gccggcagac cgacctggtg cgcgatctgg
     1081 cccgcgaagc caccgagtat gtcgaatcac ggggcctggt cacggtgccg ccgctcgcca
     1141 aggagatctg gcggatggaa atgctctcac ccgagcgaca gaaggtgagt cccttctttc
     1201 tcggcggtga agtgatccag gtgtcgtatc ccacggacga gatgagcgcc gaggacaagc
     1261 tgatgagtct gcggggcaac aatccccatt tctcgcgcgc cacggtgcat catgagctca
     1321 tcccgggcca tcatctgcaa cggttcatga cccggcgcta catgtcccat cggcaggagt
     1381 tctccacccc gttctggacc gaggggtggg ccttgtactg ggagatgcgg ctctgggatc
     1441 tgggtttccc ccgcgggccg gaggaccggg tcggcatgct cttctggcgc atgcatcgcg
     1501 ccgcccggat catcttctcg ctccggttcc acatgggcac catgaccccc cagcaggcga
     1561 tcgacttcct ggtggaccgg gtgggccacg agcgcgccaa cgctacggcc gaggtgcgcc
     1621 gctccttcaa tggcagctat ccgccgctct accagctggc ctacatgatc ggcggcctcc
     1681 agttccgggc attgcatcga gagctggtga cgaacggccg gatgtcggag cgcgccttcc
     1741 acgacgcggt cttgcagggc ggaaacatgc cggtggagat ggtgcgcgcc cggctgctgc
     1801 agaccagctt ggccagggac tatcgcgcgc ggtggctgtt tgagtaggca tgttccggat
     1861 tcccggttcc acgttccggg tacggcgctg agtgcggtgc cgagtaccta aacttgctcc
     1921 gtgaatgtac gcccagcacg cggcacagca cgagacacag cacacggcac tcagcactgc
     1981 accaagcacc gtactcggaa cccggaaggg ggaacgcgga actgccggtt gcgaactgaa
     2041 acaccagcat gccccccacc gtagtgcgcc cgtctcaacc cttcccgctc atgcgcacac
     2101 cacccggtct cctcgcgatt gccgtgttgg ccagcgtctc aggtcctctc gcggcccagc
     2161 gcgggcggga tcgggagaag gatcaggacc gtccgcccga cacctccccg ggacacggcc
     2221 tgctgaacct cgggatcggc cacaccggct tgagtttcgg taattcgagc cggtggaacg
     2281 gactccggat caacttccgt gaccgcggtg tacaacagat caacggcatc aatctcaccc
     2341 tctggaaggc ggccgatcgg gccaacccgg aagcccggct ctacgggctc cagatcggac
     2401 tggtcgggcc ggaaggtgcc tacctccgag gcgtcagcct cggattgggc gcggtggcgt
     2461 cgcagcagat ggcgggagtg aacctgggcc tcctgggtct ggtatcggaa ggcgagatct
     2521 acgggatcaa cgttgggggg ctgggtctgg tcgccgaagg cgcggcggta ggcctcaaca
     2581 tcggcggact gggggcggtg acccagggcg gcatggatgg gatcaacctc ggcggcctgg
     2641 ggctggtggc tgagcgcgac ctcagaggtc tcaatgtcgg cggcctgggg gtggtggcgc
     2701 agggcgcgat gaccggcctc aatctgggcg gactggcggt ggtggccgag gacggactgt
     2761 taggcgtgaa cctgggcggg ctggccctcg tgacccaggg atccctccgc tacctgtccc
     2821 tcgccgggat ggcgctggtg gcggaaggac gggtcgaggg gatcaacctg ggcgggctgg
     2881 ccctggtggg cggcgacaac gtcaccggcc tcaatctggc cgggctggcg ctggtggggg
     2941 acgaccatgt ccgggggctg acggtggcgg ggctggcatt ggtagccaat acccggatga
     3001 gcggcgtggg gctgacgtta ggcaggatcg tggcggacga aacccgcggc gccaccatcg
     3061 ccggctggct caagacctgg gacatgggcg gcctcgcgat ttcgccctac acccagatca
     3121 agggaccgca acgcgggctg gccatcggga tcttcaatac cgctgatgag ctgcatgggc
     3181 tgcagatcgg ggtgctcaat cgcgccaaga acaatcgcgg catcacccag tggctgcccc
     3241 tgttcaactt tcataagtag gacggaccga ccgaccgacc gactgattga ccgactgacc
     3301 gactgccggt cctaccggcc gtcagtccgt ccgaccgtct gtccgtccaa gtaaatgcca
     3361 gggcgccggc tttgatcacg ccgagctggc cttccatgcc cagcaacctg gcgtcgctga
     3421 tcgtggccgc ctgcagcacc tgcgccggcg tcatacccgc ggcgcgatag gcaaacaggt
     3481 tccggatcgc cgccgatccc tgcggaacgc ccatatcgag atagttgtcc gacccggccg
     3541 cgatagtcac gccggcgcgg atggcccgcc ggacccggtc ctgctggggt gacagcatgc
     3601 cgaggaattg gcggaaccga gtggtatcgt actgacccga ttgccgcagg tagcgctcca
     3661 ggctcaacgt atccatgtcg gtcggcacca tcatcacgcc gttcttggcc atgagcgcga
     3721 gggtggagtc ggtgacctgg taggcgtgtt cgatggaatt cacgccggcc cgcgccgccc
     3781 ggtagaccgc ggcgtcgctg gtcgcgtgcg ccgcgacttt caccccgtgc cgccgggccg
     3841 actcgacgat cgctgccagc tcggcatcgg agaagctgcc ggggttcggc gtgttgttgg
     3901 agtagatctt gatgacccga gcccccagcg tcacgttctc ccgtaccgcg tccgccgcat
     3961 cttcggcatt ccggaccacg cgatattcct cggcggcaat gctctgccaa gccggctgga
     4021 gcccggggaa ctggccgccg atggggctca gcccgggtcc ggaagcgatc atgcgaggcc
     4081 catcgacact tccttcctcg atcgcccgca tcaaggccac gtcgccgaat cgaccggaat
     4141 tgcccagatc tcgcaccgtg gtgatgccgg ccgccaggaa agtgcggccc ctggcggcgc
     4201 cgcgcagcgc ccgcagcgcg gtcccttcga gcacgacggc cttcataccc tccgaggtga
     4261 gatcgccctt gggatgttcc aggtacagca gatgggtatg ggcgtcgatg agacccggaa
     4321 gcatggtagc tccgctcagg tcgatcaccc gtgcgccggc cggcgcagtg acggtcgatc
     4381 ccaccgcgcg gatggtccgc ccctgcacca gaatctgctg attggtgagg aacacgccgc
     4441 gttcgctgtc gaacaggcgg cccgcgcgga gcacgacggt gccggtatcg cgcggggtct
     4501 gggcgggcag gcgggcagcc ggactggcgg acaggcgggc gggcgggccg gcggtcagcg
     4561 acaggagaga cagcaagaga ccgggccatc tgccataact gtccgcccga ccgcccgccc
     4621 gcctgcccgc cctcatggag tcatctgccc actcaccacc ggcaacgcca ggtgggaggc
     4681 ctgggccgcg gagcggaaca cccggtgagt cgccgcccga aaatcgctgt ccttcgccag
     4741 gaagatgttg ggcacgaacg tctggggatt gcgatcgatc agcgggaacc aggtgttctg
     4801 cacctgcacc atgatccggt ggcccttccg gaagcgatga ttggcgtggc gcaggtccac
     4861 cgtcagcgga gtgacctggt ccgggaccag cgcttcgggc ttctcccagg aattgcggta
     4921 gcgggcccgc atcacttcat tggccaccat cagctggtac ccgctcatgg ccggctcggc
     4981 ctggtacttt tcgggataca cgtcgatcag cttgacgatc cagtcgccgt cgctgcccga
     5041 agtggagatg aacaggttgg cgagcacgtt ccccgacacg accacctctt ccgccagcgg
     5101 ctcgctctcg tacgacagga catccggccg cagatgggcg tgacgctgat cgtccaccag
     5161 ccagacgggc cagttcgagc cgcccccata cagcggcagg atcgggcggg cccgatatgg
     5221 caccggccgg ttgggatcgg agacgtaggc atcgtgcgca ttgcgggtgg tatcgctggg
     5281 cggctcgaag gagagcttgc cctggggatg gaaatacagg cggcgggtgg tgctcacccg
     5341 ggtcggcggc caggtctcgt acgagaccca gcgattggca ccggtctcga acaccagcgc
     5401 ctcgggcacc ttgggatcgg ccccgtcgcg caggtagtgg gcaaaccagg gccgctggat
     5461 ctcctggcgg tagtacttgg agctgggtac tccgaacttg atccggccca gctgctcgcc
     5521 ctcgccccgg gcccagccgc cgtggttcca ggggcccacc acaatgctgt tgcgccggtt
     5581 ggcgtcatgc ttctccagca gctcatagat cttgagcggc ccgtagaagt cctcctggtc
     5641 ccaccagccc gccacgttga gcgtcggcac cgtcactcgg gtgaggtagc gggccacccc
     5701 ctgccgttgc cagaacccat cgtaatccgc gtgctgtacg tagtcgttcc aggtggggat
     5761 cttctgctgc agatagcggg cgttgatgtt ggcgagcgaa ccgaccttga ggaaccactc
     5821 gtaggtgtca tgctcatcga atgcgaaggg cgtcgtctcc ttggtggtct ccatcagggt
     5881 ggcgtactcg aagccgtagc tcagccggaa ggcaccgttg tgatggaagt catcccccag
     5941 ccacatgtcg gccggtgacg cctggggtga aacggctttg agggcggggt gggggtcgag
     6001 catcgccatc acggtgagcc acccgccata ggaaatgccc agcatcccca cccggccgtt
     6061 gtggccgggc agggtcttga gcacccactc aatcgtgtcg taggtatcgg tcccctcgtc
     6121 gatcgccttc cggtccttgg gatcgcgcgg cgggcgcagc atgacaaact ggccttccga
     6181 cttgaagcgg ccccggatgt cctggaacac gaagatgtag ccgtcctcgg ccagttcccc
     6241 ataggatgac gtgagggcgg gactgaaccc gtcctgatcg tgccccagcc cgtagggggt
     6301 ccgggtcagc aggatcggca gcgggccggt cgcctgtttg gggacgtaga tctcggtgtt
     6361 gagcttggtc ccgtcgcgca tcgggaccat gacgtcctgc cgggagaacc gttcgctggc
     6421 tcgttgggcg ggcagacggg cgggcgggcc ggcgggtaag agcaccgcgg ccaccagcat
     6481 tgtgcgcaga attgtgtgca gtggcatggc tcgaatgtcc cttgggaacc cgcgccgcgc
     6541 aagcggggca gaccgcaccg tcatcatgag cgcaggccgt catcctgagc gccgccgtca
     6601 tcctaagcgc acgccgtcac cctgagcgcc gccgtcatcc tgagcggagc gaaggatcag
     6661 cccgcgccgg ctggatgttc gcttcgctca acatgacggg gcttcgctcg acaggacggt
     6721 tctgagacag cctagtacgc ctcgcgatcg aaccgccaga gcgccagagc gccagcgcca
     6781 gggacccgac gactctgtgg ggtgtggaag ggatcagtcc tccgtactcg acccagtatt
     6841 tgcggttacg gcagtccgct gccaagcacc cgaagcgcgt tctctcccat gattcctcga
     6901 atctccggct gagtgaaccg ggcgtccttg agcgcctggg tgatctggcc catctgggac
     6961 acgtcgaacg cggtggtggt cgcgccatcg aaatcactgc ccagcgccac gtgctgggcg
     7021 ccgaccagtc cgacgacatg tcgcagggcc ttcgcgatgc cggcggggct gatgtcgcac
     7081 accgccgcgt cccagaatcc gatgccgatc accccgccgt tggcggcaat ccggcggatg
     7141 gccgagtcgc tcaggttgcg cggaccgggg caggtggcct ggaccccggt gtgcgacacg
     7201 atcacgggct tccgagccac ggccagcact tcgtcgatca gttggggcga ggcgtgagcc
     7261 aggtcgacca ccatgcccag ctcctccatg cggcgcacga cctcccggcc gaaggcgctc
     7321 aggccggtct tcgccaggcc ggccgaggag ccgcccagct cgttgtcgaa gaagtgggtc
     7381 aggccggcga cccggaaacc ggcgctaaac agggtgtcga gccgggccag gttcccgccc
     7441 agggcatgca gcccttccac cgccaggatt ccgcccacga gccgctggtt gtcgcgggcc
     7501 cggatccgca cgaagctctc cagctcctgg cgcgagcgga tcaggaccac ggtgccgcgc
     7561 gagtcgcgcg acgcctgctc gagccgggaa gcctgataca gcgcgcgctg cagcaggttg
     7621 ttccaggtct cgaccggcca gcgggacgcc gcgaccagca tccacagccg gtcccggtcg
     7681 gccggattgc tctgataatt ctgccccggc gggacctggg tcaccacgcc gaacaattgc
     7741 accgcgacgt tcccctcaat gagacggggc acatcgacgt gtccatgcgt gtttcgctga
     7801 gtgagatccc gggcccagag cagtggatcg gcgtgaagat ccacgatgtt gagctcggca
     7861 tgcagcgccc gggtggccga atccaccggg gggagcggca ctcggctgac ccggttccgc
     7921 tgccggtccg cgtaccccgc gaccaccgtg aagaagccga tcagcgcgat caccgccagc
     7981 agaagaacga ctttgatgag ccgcgcgagg aaagtcattt gtaaccaggt gctgaggacc
     8041 gagtacagag taccaagttg agaaacttag cccgccgcgc cggatacccc cggaatgccc
     8101 ggagccagcc tgcctaagac tcagtactca gtacccagta ctccgtaccc agtgattgct
     8161 ctccgatata tcttgacaca tcatacgtta gtacttacga tatatcttaa gtactatcga
     8221 gagggtgctg tcaatgtgcg cacgtggaag tgattggttt gccgacatct tcgccgaatt
     8281 tgaccccgag cgctgggccc acaagtggag ccgggaatgg gggccgggac gcgggcggcg
     8341 gcggagccag gtcttcgagt cgggcgagat gaagtacgtg atactccgcc tgttgcggga
     8401 aaagccccgt cacggctatg aagtgatcaa ggagattgaa gaacggtttg gcggctggta
     8461 tacgccgtca cccggtaccg tctatcccac cctgcagctg ctggaggacc agggactggt
     8521 tcgggtggtc gagaccgagg gccgcaagac ctatcacatc acacccgagg gcgagacctt
     8581 cctcgacaac caccgcgata ccatcgacga gatcttcgac cgggtccgcg aaacggtgcg
     8641 cgacttcacc ggcggcgcga tgggtgagtt gagccaggcc tttactcgcc tggcggcggt
     8701 ggcctggcgc gacgcctggc gtcacggccc gggcgatccc cacacccgac gtattgtcga
     8761 gatcctcaac aaggccgcgg acgacatcaa ggcactccgc gaccagccgg tttgacgtga
     8821 gagtggaggc gacaatgatc tgggcgttct tcggtctgat gatggccttg atgtggtctc
     8881 gccggtggca cggtgactgg tccggccggg gctcccgccg gaagctgggt caggagtacg
     8941 agcgccggat cgaagcgctc gagtccgacg tgaccagtcg ggaagagacc atctcgatgc
     9001 tcgagtcccg cgtgaccgag ctggaatccc gactggattt caccgagcga ctgctgatgc
     9061 agaaaacagg agtcgccgcg gaatagcgcc gtctcggtaa ccggtaggct tcggtaaacg
     9121 gtaaacggta aacagtggac tcgcgttggt cgggaacccg ttcaccgttc aaggtttacc
     9181 gtttaccgtt tactgttcac cgttcactgt tcactgttca ccgcccaccg gttcaccgtt
     9241 caccgccctt cgctccccat gacgcctccc gccattcgac tccaaggagt gcgtaaagcg
     9301 tacgggacgg tcgtggccgt cgacggactg gatctcgaag tccccaccgg cgaatgcttc
     9361 gggctgctgg gtccgaacgg tgccggcaag accaccacca tcgagatctg cgagggtctg
     9421 aaccggcccg acaccggtga agtggaaatc ctggggcggc gctggtcgac cgacgagcgc
     9481 gagctccggg agcggatcgg gatctccctc caggaaaccc agctggccga gaagatcacg
     9541 gtcgccgaga ccatcaatct gttccggagc ttctatcgag cgcctcgtcc ccttgacgag
     9601 gtgatcgatg cggtgcagct gggcgagaag cgcaacggac gagtgggcca gctgtcgggg
     9661 gggcagaagc agcggctggc actggccctg ggtctggtgt cggacccgga gctgttcttt
     9721 ctggacgagc ccaccaccgg gctcgatccc caatcgcgcc ggcagatctg ggagctgatt
     9781 cggtcgttcc agatccgagg acgcaccgtg ctcatcacca cccactacat ggaggaggcg
     9841 gaacacctct gccatcgggt ggcggtggtg gatcacggca aggtcattgc gctcggcact
     9901 ccgcgggagt tgatcgcgtc cctcggcgca cagtatgtcg ttgagttcgg cctggccgac
     9961 ggctcggctc tggccgcgga ggccctgagc ggtctcccgg gcgtcgtcgg ggtgcggcag
    10021 gaggaagacc gctggcggct gcaggtggcc gagctgcaca cggtcatgcc ggctctcctg
    10081 ggattgctcg acgggcgggg gatgccgctc accgagctcc gcacccacgc gccgaccctg
    10141 gaagatgttt tcgtctcgct gaccggaagg cacctgcgcg atgcctgaga ccggtcgctc
    10201 ctggcgcgag cgccccctcg cccgcctcac cctggtccgg tatctcgagt tcgttcgcga
    10261 gcccgaggcg atgttctggg tatttgtctt cccggtgctg ttgacggcgg ggctcggaat
    10321 cgcctttcgc tccaagcccc aggatcagat caaactggga gtgttggaga cccctcgggc
    10381 ggaggccttg accgcgtcgc tggcccagga tccccgggtc ctggtccagc ggctggatga
    10441 cagcgccggc gcgcgagccc tcaggaccgg caagatcgcg ctgctggtgg tgacctccgg
    10501 tgacggcgtg gtctaccggt tcgacgagac ccgtcccgac gcgcggatgg cccgccaggt
    10561 gaccgatgac atcctgcagc gcaaggccgg gcgggccgat ccggtggcgg tgcgggagga
    10621 gcaggtgcgg gaacgcggtt cccgctatat cgacttcctg gtgccggggc tgctgggcat
    10681 gaacctgatg ggcaccggga tctggggcgt cggcttcgcc atcgtggatc agcggcgcaa
    10741 gaagctgctc aagcgcctga tctccacacc catgtcgcgg ggccagtacc tgctctcctt
    10801 catgctctcg cgcctgatct ggctggtact ggaggtggcg gccctggtgg gtttcggtct
    10861 gctggtgttc ggggtgccgc ttcgcggtag cgtccccaca ctgctcctgg tctgcctgct
    10921 gtccgccttc gccttcagcg gcctgggcct gatgatcgcg gcccgccctc gaaccatcga
    10981 ggccgcgtcg gggttgatga acctggccat gatgccgatg tgggtcttct ccggcgtttt
    11041 cttcaactcg ggcaacttcc ccgacgtgat gcagccgttc atccaggccc tccccctcac
    11101 cgcggtagtc gacgctctcc gcgccacaat gctggaaggg gcctcactcg ttacgctggc
    11161 cccggagctg gccgtcgtgg ggctgtggat ggtcgcgagt ttcgcgattg ctctaaagat
    11221 ctttcggtgg cagtagggag cggggagc
//
LOCUS       DASWKS010000149         3441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_68822, whole genome shotgun sequence.
ACCESSION   DASWKS010000149 DASWKS010000000
VERSION     DASWKS010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68822"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /gene="thrC"
                     /locus_tag="VGA78_04475"
     CDS             complement(<1..910)
                     /gene="thrC"
                     /locus_tag="VGA78_04475"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX9893151.1"
                     /translation="MKVFTTPRPATWQTCIACGNERLERDSAVRCQCGGLLTVRHRAP
                     AWSGEALRGLFQTRCCTRPDTIASGVWRFRELVLPTARDEELITHPEGNTPLLQREVV
                     TRWAGVEELFLKHEGHNPTGSFKDRGMTVGMTQAKRIGARAVACASTGNTAASLGAYA
                     AHAGLPALVLVPAGHTAAGKLVQTLAYGARTLSVRGDFDQCLRLLDQASERLGVYLLN
                     SINPFRLEGQKTIVFELLQQLRWDPPDWIVLPAGNLGNLSAFGKALTEARDWGLIDRL
                     PRLAGVQAEGAAPFARGFLEGFRVRHR"
     gene            complement(907..1836)
                     /locus_tag="VGA78_04480"
     CDS             complement(907..1836)
                     /locus_tag="VGA78_04480"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEX9893152.1"
                     /translation="MARIAEAFAPGSIGNVGPGLDVLGLALAGTGDTVTAERRDSRGI
                     EVAESGHPDLPQDPERHASGLAARGVLARAGAHSMGLVLRVRKRLPLAGGQGGSAASA
                     VAGAGAANALLDQPLPTDQLLAAALEAEATLAGRHLDNIAASLLGGLVLVRSLDPIEA
                     VTLPVPPDLPLVLVQPKMTLRTADGRAALPASIPLATTIHQMAQVGAIVAACASGDLA
                     LLGRALDDRIAEPARSGLLPGFAAAKSAALEAGALGCSISGSGPTAFALAPDAAAAPA
                     IARAMVLAYQRAGLEAEARITHPDVHGLRVELS"
     gene            1957..3057
                     /locus_tag="VGA78_04485"
     CDS             1957..3057
                     /locus_tag="VGA78_04485"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX9893153.1"
                     /translation="MRIGVPRETALREQRVALMPAAVSRFVKQGVEVLVEQGAGSSAY
                     VPDTEYQLAGARLVDSRSAFDTDLVLKVQRPSGEEAARLRTGAALVGLLQPVIGDAWL
                     DDFSARHISAFAMELVPRTTKAQSMDVLSSQATVAGYQAVLVGASHLSRLLPMLTTAA
                     GTIPPGKVFVIGAGVAGLQAIATARRLGAVVSAFDVRPVVKEQVQSLGASFVEVEQVA
                     AEAAGGYARELDQEQQKRVLDAVARQVVTQDLVITTAQIPGKPAPRLITADMVYAMRP
                     GSVIMDLAAETGGNCELTRPGETVEANGVRVMGPLNLPSQVPYHASAMYSKNVQTFVE
                     YILKDGALQLDMNDPITGPMCVTHAGQVRYGR"
     gene            3062..3355
                     /locus_tag="VGA78_04490"
     CDS             3062..3355
                     /locus_tag="VGA78_04490"
                     /inference="COORDINATES: protein motif:HMM:NF024179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HEX9893154.1"
                     /translation="MLETLLTSIVIFTLATFLGVELIHRVPSTLHTPLMSGANAISGI
                     TVVGAIIVAGGGHGWISTVLGFLAVVFAMINVVGGYAVTDRMLSMFKGRQEKR"
BASE COUNT          541 a         1194 c         1193 g          513 t
ORIGIN      
        1 cccggtgccg gacccgaaat ccttcgagga atcctcgggc gaagggggcg gcaccctcgg
       61 cctgcacccc ggccagccgc ggcagccggt cgatgagtcc ccagtcgcgg gcctccgtca
      121 gagcctttcc gaacgccgag aggttcccca ggttgccggc cggcagcacg atccagtcgg
      181 gcggatccca tcggagctgt tgcagcagct cgaacacgat ggtcttctgc ccctccagcc
      241 ggaacggatt gatggaattg aggaggtaca caccgagccg ttcactcgcc tggtcgagca
      301 gcctgagaca ctgatcgaag tctccccgca ctgacagagt gcgggcacca taggccaggg
      361 tctggaccag cttgccggcc gcggtgtgcc cggcggggac cagcaccaaa gcgggcagac
      421 cggcatgggc ggcgtaggcc cccagggagg ccgcggtgtt tccggtcgag gcacaggcga
      481 ccgcgcgcgc cccgattcgt ttcgcctggg tcatccccac cgtcatgccc cgatccttga
      541 aggagccggt ggggttgtgg ccctcgtgct tgaggaaaag ctcctccacg ccggcccatc
      601 gggtgacgac ctcgcgctgc aagagcggcg tattgccttc cggatgggtg atcagctcct
      661 cgtcccgggc ggtggggagc accagttcgc gaaagcgcca caccccggac gcgatggtgt
      721 cgggccgggt gcagcaccgg gtctggaaca ggcctcgcaa cgcctcgccc gaccacgccg
      781 gcgcgcgatg ccgcaccgtc agcagtccgc cacactgaca ccgcaccgcg gaatcccgct
      841 ccagccgctc gttcccgcag gcgatgcagg tttgccaggt tgccgggcgg ggcgtggtga
      901 acaccttcat gagagctcga cccgaaggcc atggacatcg ggatgcgtga ttcgggcttc
      961 ggcctcgagg ccggcgcgct gataggccag gaccatggcc cgggcgatcg cgggcgccgc
     1021 cgccgcatcc ggagccagcg cgaacgcggt ggggccgctg ccggagatgg agcaccccaa
     1081 cgcccccgct tccagcgcgg ccgacttggc cgccgcgaac ccgggcagca gcccgctccg
     1141 cgcgggctcc gcgatacggt cgtcgagggc ccgtcccagc agcgccaggt cgccgctggc
     1201 gcaggccgcc acgatggcgc ccacctgggc catctgatgg atggtcgtcg ccagcggtat
     1261 ggaggcgggg agggcggcgc gcccgtcggc ggtccgaagg gtcatcttgg gctgcaccag
     1321 caccagcggg agatcgggag gaaccggaag ggtgacggcc tcgatgggat cgagcgagcg
     1381 caccagaacc aggccgccca gcaggctggc cgcgatgttg tcgaggtgac gcccggctaa
     1441 cgtggcctcg gcttcgagtg ccgcggccag caactgatcg gtcggaagcg gctggtcgag
     1501 caaggcgttc gccgccccgg ccccggcgac ggcggatgcc gcgctgccgc cctggccgcc
     1561 cgcgaggggc agccgcttcc gcacccgcag taccaggccc atcgagtggg ctccggcgcg
     1621 cgccagcacc ccgcgcgcgg ccaacccgct ggcgtgccgc tcgggatcct gagggagatc
     1681 gggatggcct gattccgcga cctcgatgcc ccggctatcg cgtcgttccg ccgtcaccgt
     1741 gtcaccggtg cccgccagcg ccagcccgag cacatccagc ccgggcccga cgttgccgat
     1801 cgaaccggga gcgaacgcct cggcgatgcg tgccatgatg gtccggagca taaagcactg
     1861 aggcgtgagg agtaaggagc cagcttgtgc ctcacgcctg gtgcctcacc gtgctagatt
     1921 ggcggggcct tttccgcgag ctcgaaagga gccctgatgc gtatcggtgt gccgcgggaa
     1981 accgcgctgc gcgaacaacg cgtagccctg atgccggcgg ccgtatcgcg tttcgtgaaa
     2041 cagggagtcg aggtcttggt ggagcagggg gcgggcagca gcgcctacgt gcccgacacc
     2101 gagtatcagc tggccggcgc tcgcctggtt gacagccgca gtgccttcga caccgatctg
     2161 gttctcaagg tgcaacgccc gtcgggcgag gaagccgccc ggctcagaac cggggccgcg
     2221 ctggtcggcc tgctccagcc ggtgatcggc gacgcgtggc tcgacgactt ctcggcccgt
     2281 cacatctccg cgttcgccat ggagctggtg ccccgcacca ccaaagccca gagcatggat
     2341 gtgctctcct ctcaggccac cgtggccggg taccaggcgg tgctggtggg cgcgtcacat
     2401 ctgtcccggc tcctccccat gctcacgacc gccgcgggca ccatcccacc gggcaaggtg
     2461 ttcgtgatcg gcgcgggggt cgccggcctt caggcgattg ccacggcgcg ccgcctgggt
     2521 gcggtggtgt cggccttcga cgtccgcccg gtggtcaagg aacaggtcca gagcctgggc
     2581 gccagcttcg tggaggtcga gcaggtggcg gccgaagcag cgggcggcta cgcccgggag
     2641 ctggaccagg agcagcagaa gcgggtgctc gatgccgtcg cccggcaggt ggtgacacag
     2701 gacctggtga tcaccaccgc gcagatcccc gggaagcccg ccccccggct catcaccgcc
     2761 gacatggtgt acgccatgcg gcccggttcg gtcattatgg acctcgcggc cgaaaccggc
     2821 ggcaactgcg agctcactcg gccgggagaa accgtcgagg cgaacggggt gagagtgatg
     2881 gggcccctca acctgcccag ccaagtcccc tatcacgcca gcgcgatgta cagcaagaac
     2941 gtgcagacct tcgtggaata catcctcaag gacggcgccc tgcagctcga tatgaacgat
     3001 cccatcaccg gtccgatgtg cgtcacccac gccggacagg tccgctacgg gaggtagtcg
     3061 cgtgctcgag accctgctga ccagcattgt catcttcacg ctggcgacgt ttctgggggt
     3121 ggagctgatt caccgggtgc cgtcgaccct gcataccccc ctgatgtccg gggccaatgc
     3181 catcagcggt atcaccgtcg tcggcgccat catcgtggcc ggcggcggcc acgggtggat
     3241 ttccaccgtg ctgggattcc tcgccgtggt cttcgcgatg atcaacgtgg tcggcgggta
     3301 cgccgtgacc gaccggatgc tgagcatgtt caagggccgg caggagaaac gctgatgccc
     3361 cgcggcctga ccgaactggc gtacctcctc gccgcctgct gtttcatcat cggactcaag
     3421 tggctgtcga gtccccgcac c
//
LOCUS       DASWKS010000150         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_442168, whole genome shotgun sequence.
ACCESSION   DASWKS010000150 DASWKS010000000
VERSION     DASWKS010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442168"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..662
                     /locus_tag="VGA78_04495"
     CDS             <1..662
                     /locus_tag="VGA78_04495"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9893155.1"
                     /translation="EDLYYRLNVLNIYLPPLRERREDIPLLVRKFIREFTTQHDRKFP
                     GLSAEALQRLVSAPWPGNVRQLRNLVESMVVLAPGTEIRAEDIPADIFEGAPTLLPVL
                     ATRAELRENDQPQQLTFILRSLMDLRLQVEELRRRLDETPSHVHVIEVAEPSHGRAGE
                     DEGTPVEVLYRPGMTMADVEKAAIEAALREWHGNRRQAAQALGIGERTLYRKIKEFKL
                     G"
     gene            943..2502
                     /locus_tag="VGA78_04500"
     CDS             943..2502
                     /locus_tag="VGA78_04500"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF014904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX9893156.1"
                     /translation="MGTLQQALALAGRRDTVLILGTEAPAHFYPASAEQVINACYEAG
                     FPLVSRGVIGDELVAEEYLRMWAEEGWGTMIRSTDPVVVGAIGMDFPELIPYLAPIVT
                     PPVAEARYLRRLAASDLRVVYAGPWPVNAVDGLDATLTFEELEQLFRLRGVDLMSQPS
                     VFSRVPMERRRHLSLAGGFPGAWLAHGGPGVPRLHRIRGLQGLKALSRAVVTDRLELG
                     FVDLLSCEGGLDHPVLGPRELLLWRRTLVQTSEPPRSRDPVVDPTVKASVGATFRFRT
                     QVPRPDHDVVKGILEQIGTEPSGKPWDCGACGFGTCAAFAQAVAMGRSSLRQCPPYLT
                     RWAEESQRAAATDLLTGLATFRVLRDRLGQEQERSKRSGDRFAALFLDLDRLKDVNDR
                     HGHEAGNDVLRAVAAEVRSAIRATDLAARYGGDEFVVILTRTDLPGATRVAEALRAGV
                     ERVGQRLGYGHGTVTVSIGIAEYDPAQPPSGDLLVDADRALYRAKAAGRNKVIEGSLM
                     RSTDEPGGITR"
     gene            2499..3239
                     /locus_tag="VGA78_04505"
     CDS             2499..3239
                     /locus_tag="VGA78_04505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893157.1"
                     /translation="MTGSNPMRAAETAPGGRGPAAEMPDPWGVRRAENLLTTLEGVLS
                     ARVVTTPLGEVSEIHILASSGLGPKQVVRNVESALLAHLGLKVDHRKISVAQTADVRP
                     IEALERGAIREQVLRRSVLFEDLGVASAERAHRVVLGVRLTVGGRTERVEEEVADTLR
                     ARLEGAARATAGALEKLIERHTLAVEGVKVVEALDRTVVFVVVRGMGGRDSHVMTGTA
                     EVRESAERAAVFAVLDATNRWVEARRSA"
BASE COUNT          538 a          978 c         1268 g          527 t
ORIGIN      
        1 gcgaggatct ttactaccgg ctgaatgtcc tcaacatcta tctcccgccg ctccgggagc
       61 ggcgggaaga cattccgctg ctggtgcgga aattcatccg tgagttcacc acccagcacg
      121 accggaaatt ccccggcctg agcgccgaag ccctgcagcg gctggtgtcg gcgccctggc
      181 ccggcaacgt acgccagctc cgcaacctgg tcgaatcgat ggtggtgctg gcgcccggca
      241 ccgagatccg ggcggaagac attccggccg acattttcga aggcgcccca acgctgctgc
      301 cggtgctcgc cacgcgggcc gagctgcgcg agaacgacca gccgcaacag ctcacgttta
      361 tcctgcggag cctgatggat ctgcggctgc aggtggagga actgcggcgc agactcgacg
      421 aaacgccctc gcacgttcat gttatcgagg tcgccgaacc atcgcatgga cgtgcgggtg
      481 aagacgaagg cactccggtg gaggtgctct accgtcccgg catgaccatg gccgacgtcg
      541 agaaggcggc gatcgaggcc gccctccggg agtggcacgg aaaccgccgt caggctgccc
      601 aggcgttggg catcggcgag cggaccctgt accgtaagat caaggaattc aagctgggct
      661 gaattccggt cagtggatgg gccgtataaa tactcgacac aaaactatct tgacatcaca
      721 ttattatagg ataggcccca cttcaggggc cggtccagcg gcttcgcttt gagattcgtc
      781 gtagaccagg agcggtgtgt tggctgccta gcctgcgttc gggtttgtcc gaccggggcg
      841 atcgcagtgc cggtggaaca cggggtcgtt tcaattatgg acgacgcctg catccgctgt
      901 ggtcactgtc tcccagcctg cccccacgac gcgatcgcgg cgatggggac cctgcagcag
      961 gcgctggcgc tggcggggcg acgggacacc gtcctgatcc tggggaccga ggcgccggcc
     1021 cacttctacc cggcctcggc ggagcaggtg atcaacgcct gctacgaagc cggattcccg
     1081 ctggtgtcgc ggggagtgat cggggacgag ctggtggcgg aggagtacct ccggatgtgg
     1141 gcggaggaag ggtgggggac catgatccgg tccaccgacc cggtggtggt gggcgcgatc
     1201 gggatggact ttcccgagct aatcccctac ctcgctccaa ttgtgacacc tccggtggcc
     1261 gaggcacggt atctgcggcg ccttgctgca tcggatctta gagtggttta tgccggcccg
     1321 tggccggtca acgctgtcga tggattagac gccacgctga cgttcgagga gctggagcag
     1381 ttgttccggt tgcggggcgt ggacttgatg tcgcagccct cggtgttcag ccgggtcccg
     1441 atggagcggc gccgccatct cagtctggca ggcgggtttc cgggggcctg gctggcccac
     1501 ggtggaccgg gagttccccg gctgcaccgg atccgggggc tgcagggtct caaggcgtta
     1561 tcgcgggcgg tggtgacgga ccggctcgag ctgggcttcg tcgacctgct gtcctgcgag
     1621 ggtgggctgg atcacccggt cctggggcct cgcgaattgc tgttgtggcg ccggaccctg
     1681 gtgcagacca gcgagccgcc tcggagccgc gacccggtgg tcgacccgac ggtcaaagcc
     1741 agtgtcgggg cgacgttccg gttccgaacc caggtacccc ggcccgacca cgacgtggtc
     1801 aaagggatcc tggagcagat cgggaccgag ccgagtggga agccgtggga ctgcggggcg
     1861 tgcggcttcg ggacctgcgc cgcctttgcc caggcggtgg cgatggggcg gagctcgctc
     1921 cggcagtgtc cgccctactt gacccggtgg gccgaggaat cacagcgggc ggcggcgacg
     1981 gacctgttga ccggcctggc caccttccgg gtgctgcgcg accggctggg ccaggagcag
     2041 gagcggagca agcgctccgg ggaccggttc gcggcgctgt tcctggacct ggaccggctc
     2101 aaggacgtga acgaccgcca cgggcacgag gctggcaatg acgtgctgag ggcggtagcc
     2161 gccgaggtcc ggagcgccat ccgcgcgacc gacctggcag cccggtacgg gggcgacgag
     2221 ttcgtggtga tcctgacccg gaccgacctg ccaggcgcca cacgtgtggc ggaggcgcta
     2281 cgagctggtg tggaacgggt gggacagcgg ctgggatacg gccatgggac ggtgacggtc
     2341 agtatcggga tcgcggaata cgatccggcc cagccgccca gcggcgacct gctggtggac
     2401 gcggaccggg ctctgtaccg ggccaaggcg gcggggcgga acaaggtgat cgaaggcagt
     2461 ctgatgcgct cgaccgatga acctgggggg atcacacggt gaccggttcg aacccgatgc
     2521 gtgcggcgga gacggcgccc ggtggccggg ggccggcggc ggagatgccc gatccctggg
     2581 gtgtgcgccg agccgagaat ctgctgacca cgctggaagg ggtgctgtcg gcccgggtgg
     2641 tgacgacacc gctgggcgag gtgagcgaga tccacattct ggccagctcg ggcctgggtc
     2701 ccaagcaggt ggtgcggaac gtggaatcgg ccctccttgc gcatctgggc ctcaaggtgg
     2761 atcatcgcaa gatcagcgtg gcacaaacgg ccgacgtgcg gccgatcgaa gccttggagc
     2821 gcggggcgat ccgggagcag gtgctccggc gctcggtgct gttcgaggac ttgggagtgg
     2881 cgtccgcgga gcgggcccac cgcgttgtgt taggcgtgcg gctcacggtg ggcgggcgga
     2941 ccgagcgggt ggaggaggaa gtggccgaca cgctccgggc ccggctggaa ggggcggcgc
     3001 gggccacggc gggtgcgctg gagaagctga tcgagcggca cacgctggcg gtggaagggg
     3061 tcaaggtggt ggaggcactg gaccggaccg tggtgttcgt ggtggtgcgg gggatgggtg
     3121 gccgggacag ccacgtgatg acgggtacgg ctgaagtgag agagagcgcg gaacgggccg
     3181 cggtgtttgc ggtcctggac gcgaccaacc gctgggtgga ggctcggcgg tcggcgtgag
     3241 gtcgtgactc gcgccggata ctggaaacgt taccggagga aaacggggag agagaccagg
     3301 gaccaggaaa a
//
LOCUS       DASWKS010000151         1570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_442225, whole genome shotgun sequence.
ACCESSION   DASWKS010000151 DASWKS010000000
VERSION     DASWKS010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442225"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..863
                     /locus_tag="VGA78_04510"
     CDS             <1..863
                     /locus_tag="VGA78_04510"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX9893158.1"
                     /translation="FLVMPAVLWCVDSGIGVRAGLLLVTSAGLNDALKVAFGLPRPYW
                     ISHEVAALSGETSFGLPSGHAQNGVVLWGRLAAWSRRWWFIFAAALIAFAVSLSRVFL
                     GVHFPMDVLAGWAVGLGALALALTLEERLGRWLARLRIWAQLGLVLVASAVMVGLGAL
                     SLKVTEARPLPASWAENAATARPADDPIDPRSLDPFVARGGALFGLGSGAVLLTAWGR
                     FRARSSLVRSAARYSIGALGVLIVFLGLRAVFPAGEDWIGSLFRALRYAALGFWIAYG
                     APRMFTLMRA"
     gene            complement(917..1282)
                     /locus_tag="VGA78_04515"
     CDS             complement(917..1282)
                     /locus_tag="VGA78_04515"
                     /inference="COORDINATES: protein motif:HMM:NF039800.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6504 family protein"
                     /protein_id="HEX9893159.1"
                     /translation="MADFSPLAFVDEPIEVDFDRPPALLKRPGPPSAFRWRGEDHRIE
                     ALLSEWFDYGRKGRMERNMAPEHLETAKRRGSWGVGRFYFRVRVRSGRVFDLYYDRAP
                     ESAGDRTGHWFLWREMSPM"
     gene            complement(1275..>1570)
                     /locus_tag="VGA78_04520"
     CDS             complement(1275..>1570)
                     /locus_tag="VGA78_04520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893160.1"
                     /translation="FGAYLFPSGWHSIWKSFPWASDAHALGWPLVAIGAGWSGALLGL
                     SLGRRWAHAAAGVLALAALGWLGVSTLLGAAVLLCLFAPSTRRWIREMEARGG"
BASE COUNT          229 a          544 c          521 g          276 t
ORIGIN      
        1 atttcctggt catgccggcc gtgttgtggt gcgtcgacag cggcatcggg gtgcgggcag
       61 ggctgctcct cgtgacgagc gccggcctca acgacgctct caaagtcgcc tttggccttc
      121 ctcgcccgta ttggatcagc catgaggtgg cggcgctgtc cggcgagact tccttcggtc
      181 tcccttcggg ccacgcccag aacggggttg tcctatgggg aaggctcgca gcctggtcgc
      241 gccgttggtg gttcatcttc gccgcggcgc tgatcgcttt cgccgtctcc ctttcgcgcg
      301 tattcctggg tgtgcacttc ccaatggatg tattggcggg ttgggccgtt gggctcggtg
      361 cgctggcgct ggccctaacg ctcgaggagc gactcgggcg ttggctggcc cgcctgagga
      421 tctgggcgca gctcggtctg gtcctcgtag cctcagccgt gatggtgggc ttgggcgcgc
      481 tcagtctcaa ggtgacggaa gctcggcccc ttcccgcctc atgggccgag aacgccgcca
      541 cggccaggcc ggccgatgat ccgatcgacc cccgctcgct ggatccgttc gtcgcccgcg
      601 gtggggcgct cttcggcctg ggatccggcg ctgtgctgct gacggcgtgg ggccgcttcc
      661 gggcccggtc aagtcttgtg cgttctgctg cccggtattc gatcggggcg ctgggggtcc
      721 tgatcgtgtt cctcggactg cgggcggtgt ttccagcggg agaggattgg atcggctccc
      781 tcttccgcgc gctccgctac gccgctctgg gattctggat tgcgtacggc gcaccgagga
      841 tgtttaccct catgcgggcg taatccctgt aggggcgaac caccctaacc cgggtgagaa
      901 cacaggtgct tcgcccctac atggggctca tctcccgcca caggaaccaa tgcccggtcc
      961 ggtcgccggc tgattcgggc gcccggtcgt agtacagatc gaagacgcgc ccgcttctca
     1021 cccggacgcg aaagtagaac cgcccaaccc cccacgagcc gcgccgcttc gcggtctcca
     1081 gatgctcggg cgccatgttg cgctccattc gtcctttacg cccgtagtcg aaccactccg
     1141 agagcagcgc ctcaatccga tggtcctcgc cgcgccagcg aaaggcggac ggcgggcccg
     1201 gtctcttgag cagggccggc gggcggtcga aatcgacctc gatcggctca tccacgaagg
     1261 cgagcggaga aaagtcagcc accccgcgcc tccatctccc gaatccagcg tcgggtggag
     1321 ggggcgaaca aacacaacag gaccgccgcc ccgagcaggg tgcttacgcc gagccagccc
     1381 agcgccgcca acgccaggac gccggccgcg gcatgcgccc agcgccgccc gaggctcagc
     1441 cccaacagcg cgcccgacca gccggcgccg atcgccacaa gcggccagcc cagcgcgtgc
     1501 gcgtcgctcg cccagggaaa agacttccag atcgaatgcc atccggaagg gaaaaggtag
     1561 gcgccgaaca
//
LOCUS       DASWKS010000152         4484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1934367, whole genome shotgun sequence.
ACCESSION   DASWKS010000152 DASWKS010000000
VERSION     DASWKS010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4484
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934367"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..1376
                     /locus_tag="VGA78_04525"
     CDS             60..1376
                     /locus_tag="VGA78_04525"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9893161.1"
                     /translation="MSVFPAARMAVVAIALVGAPSRAVTQPVPVPLRLGAVYRDLEAR
                     SPMLRAASASARAAAARVGPVSRLPDPSLQLSTMNRDLPGFELNEPLGMNQVQLMQMI
                     PLGGRIGLATQAARARARAEEARIPEVVLTQRALAARQFYALYRIDRSVGVLKETREL
                     IRKLERTAEAMYAVGSGRQPDILRAQVEIARMTEDILRMEAMRVAEAARLNGLLDRPP
                     ADSVTRPALPDLEVSLPTADSLIALALGTRPMLRAAGAQVAAALAEERRARREIWPDL
                     TLGVIYGQRGMPDGGTERMVSLMVGATVPIWAGSRQKQMRLEALAMREMAEADLATLK
                     AETRAAVLEILAELDRVTRLTALYRGTVLPQAGATVSSALAAYQVGSVDFMTVLDNQM
                     TVNRYRLELIGLAAERGTMLAELEMITGRTWVDPDTMVSDEPGGGR"
     gene            1373..2671
                     /locus_tag="VGA78_04530"
     CDS             1373..2671
                     /locus_tag="VGA78_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9893162.1"
                     /translation="MNAPDLNPFAPSATPGRRLGRIGLFVVAAAAAVAAVVWWSGRGQ
                     SSTPAGHDMASMAAPAAGEAKPVTLAPSDQQRIGVTFAPVTETPMARTVRVVGLVKED
                     ETRARTITARVDGFVERLDVDFTGQLVRAGEPLLGLYAPDVVAAQTELLLALELERAV
                     SAADPEAKASASRAVAAGRQRMQQWNVPDDVVARVEQTGTVERVVPLRSPYDGFVIEK
                     SVLLGQRIMAGQPLYRLADLDVVWVEGEMFEQDLPLVRLGATVRATFQALPGVERSGR
                     VTYVYPTVDPATRTARIRVELPNRDMRLKPGMYGLLQFEGRPMAGLTVPRSAILATGT
                     RNLVFVKLTDGRFEPREVVLGASTPERIQVLRGLALGDTVVASGTFLLDAESNLGSLL
                     GGMGDMPGMDIGPPKAAPRRPDSVAKPPVPPMDHSQHEGR"
     gene            2679..>4484
                     /locus_tag="VGA78_04535"
     CDS             2679..>4484
                     /locus_tag="VGA78_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9893163.1"
                     /translation="MLRRIIAWSAANRFLIGLAVVALIAGGIVAVRRTPLEALPDLSD
                     VQVIVQAEFAEQAPRIVEDQVTYPIAAEMLKVPGSRVVRGYSFFGISFVYVLFDDATD
                     LYWARSRVLEYLNGIKGKLPASVSPTLGPDATGLGWVFQYALEDTTGRLDLSQLRSLQ
                     DWQLRYALTAVPGVSEVASVGGFEKQYQIDLDPARLQAYGVSITRVMEAIQNANADVG
                     AMVMELSEREYMVRGLGYLRSIDDIENVVVSATQTGTPIRVAELGRVSVGPAVRRGIA
                     ELDGRGDAVGGIVVMRFGENALQTIERVKARLAEIQGSLPEGVVFHTVYDRSDLILRS
                     IRNLRNTLIEESLVVAAVCVLFLLHARSALVAIITLPLGILIAFILMRSVGVGSDIMS
                     LGGIAIAIGAMIDAAIVMIENMHKHLERALEAKGAGGGRWLDTRVLSTAERWGIVVDA
                     SKEVGPALFFSLLIITVSFIPVFVLEGQEGRLFRPLAFTKTFAMAGASLLSVTVVPVA
                     MGLFVRGRIFREQANPLNRVLIRLYRPVIDLVLRHRWGVIGAGVLALTLTWIPWSRLG
                     SEFYPPLDEGTLLFMPTTLPGVSVARAREILRIQDS"
BASE COUNT          681 a         1441 c         1588 g          774 t
ORIGIN      
        1 cacacctcct tgtcggcctg agccagctgc ttcgctcgac ctgaaccaag gagtgtttca
       61 tgtccgtctt tccggcggcc cgaatggccg tcgtggcgat cgccctggtg ggcgcgcctt
      121 cacgcgccgt gacgcaaccg gtgccagtcc cgctgcgcct tggcgccgtg tatcgcgatc
      181 tcgaagcgcg cagtcccatg ctccgggccg cgtcggcgtc ggcccgcgcg gccgccgcga
      241 gagtcgggcc ggtcagtcgc ctccccgatc cgtcgctgca gctgtccacg atgaaccggg
      301 atctgcctgg ctttgagctc aacgagccgc tgggtatgaa ccaggtgcag ctgatgcaga
      361 tgatcccgct gggaggacgg atcgggctgg ccacccaggc agcacgggcg cgcgcgcgag
      421 cggaggaggc cagaatcccc gaggtggttc ttacccagcg ggccctggcc gcccggcaat
      481 tctacgcgct ctaccggatc gaccgatcgg tcggggtcct gaaggaaacc cgcgagctga
      541 ttcgcaagct cgaacgaacc gccgaagcga tgtatgccgt gggaagcggc cgccagccgg
      601 acatccttcg ggcccaggtc gagatcgccc gcatgacgga ggacatcctc cggatggagg
      661 cgatgcgggt ggctgaggcc gcccgcctca acggcctgct cgaccggccg ccagccgact
      721 cggtgactcg acccgccttg ccggacctcg aggtgtcgct ccctaccgcc gattcgctga
      781 tcgcgctggc cctcggcacc aggccgatgc tgcgtgcggc cggcgcgcag gtggcggcgg
      841 cgctggccga ggagcgtcgc gcccgccgcg agatctggcc cgatctgacc ctgggggtga
      901 tctacgggca gcggggcatg cccgatggcg gcacggaacg gatggtcagc ctgatggtgg
      961 gcgccaccgt gcccatctgg gccggtagtc ggcagaagca gatgcggctc gaggcgctgg
     1021 ccatgcggga aatggccgag gctgatttgg caactctgaa ggccgagacc cgggctgcgg
     1081 tgctggagat ccttgcggaa ctggaccggg ttacccggtt gacagcgctg taccgcggca
     1141 cggtcctgcc ccaagccggc gccacggtga gttcggcgtt ggccgcctac caggtgggga
     1201 gcgtggattt catgacggta ctcgacaacc agatgaccgt gaatcgctac cggctcgagc
     1261 tcatcgggct tgccgccgag cgcggcacca tgctcgctga gctcgagatg atcacggggc
     1321 ggacgtgggt cgacccggac accatggtgt ccgatgaacc aggaggtgga cggtgaacgc
     1381 ccccgacctg aatcccttcg cgccttccgc gacgccgggg cgccgcttgg gacgcatcgg
     1441 cctgtttgtc gtcgcggcgg cggcggcggt cgcggcggtg gtatggtgga gcggacgagg
     1501 ccagtcctcc acgcctgcag gccacgacat ggccagcatg gccgccccgg ctgccggcga
     1561 ggcgaagccg gtgacgctgg cgccaagcga ccagcaacgg atcggcgtga cgttcgctcc
     1621 ggtgaccgag accccgatgg cccgcacagt gcgcgtcgtg ggcctggtga aggaggatga
     1681 gactcgggcc cggaccatca ccgcccgagt cgacggcttc gttgaacgac tcgacgtgga
     1741 ttttaccggc cagctggtgc gggcgggcga gccgctgctc ggcctctacg cgcccgatgt
     1801 agtcgccgca cagacggagt tgctgcttgc gctcgaactc gagcgcgccg tcagtgccgc
     1861 cgatcccgag gccaaagcgt ccgcctctcg tgcggtcgcg gcggggcggc agcggatgca
     1921 gcagtggaac gtaccagacg atgtggtcgc gcgggtggag cagaccggca cggtggaacg
     1981 ggtcgtacca ctgcggtcgc cctacgacgg cttcgtgatc gagaagagcg tgttgctggg
     2041 gcagcggatc atggcgggcc agccgctcta tcgcctggcg gatctcgatg tggtgtgggt
     2101 cgagggcgaa atgttcgagc aggacctgcc cctggtgcgg ctgggcgcga cggtcagggc
     2161 caccttccag gccttgcccg gggtagaacg tagcggccgc gtgacttatg tgtaccccac
     2221 cgttgatccc gccacccgga cggcgcggat tcgggtcgag ctcccgaaca gggacatgcg
     2281 gctcaagccg ggaatgtacg ggctgttgca gttcgagggc cggcccatgg cgggactcac
     2341 ggtgccgcgg tccgcgatac tggccaccgg aaccaggaac ctggttttcg tcaaactgac
     2401 cgacgggcgg ttcgaaccgc gcgaagtggt tctgggcgcg tcgaccccgg agcgcatcca
     2461 ggtgctgcgc ggtcttgcct tgggtgacac tgtggtcgcg tccggcacct tcctgcttga
     2521 tgccgagtca aatctgggct cgctgcttgg cggcatggga gacatgccgg ggatggacat
     2581 tggtccaccc aaggcagcgc ctcggcggcc ggactcggtg gccaaaccac ccgtaccgcc
     2641 gatggatcac tcccagcacg agggaaggtg accgctttat gctgcgacgc atcattgcct
     2701 ggtcagccgc gaaccgcttc ctcatcgggc tcgcagtggt ggccctcatc gccggcggga
     2761 tcgtggccgt tcgacgcacg ccgctcgagg cgctgcctga cctgagcgat gtccaggtca
     2821 tcgtgcaggc ggagttcgcc gagcaggccc cgcggatcgt ggaggaccaa gtcacctacc
     2881 ccatcgcggc cgagatgctc aaggtgccgg ggtcgcgcgt ggtccggggg tactcctttt
     2941 ttggaatctc gttcgtctac gtcctcttcg acgacgccac cgatctctat tgggcccgat
     3001 cgcgggtgct cgagtatctg aacggcatca agggcaagct ccctgcgtcg gtatcgccga
     3061 ccctcgggcc ggacgcaacc ggcctgggct gggtcttcca gtacgcactg gaggacacga
     3121 ccggccggct ggatctctcg caactccgca gcctgcagga ctggcagctt cggtacgcgc
     3181 tcacggcggt ccccggcgtc tccgaggtcg cttcagtggg agggttcgag aagcagtacc
     3241 agatcgatct ggatcccgcg cgcctgcagg cctacggcgt ctccatcacc cgggtgatgg
     3301 aagcgatcca gaatgcgaat gccgacgtgg gcgcaatggt gatggagtta tcggagcggg
     3361 aatacatggt gcggggattg ggatacctgc gctcgattga cgacatcgag aatgtcgtgg
     3421 tcagcgccac ccagaccgga accccgattc gggtggccga attgggccgg gtctcagtcg
     3481 gcccggcggt ccggcgcggc atcgcggagc tcgatggccg gggtgacgcc gtcgggggca
     3541 tcgttgtcat gcgtttcggg gagaacgcgc tccagaccat cgagcgggtc aaggcccgtc
     3601 tggccgaaat ccaggggagc ctgcccgaag gcgtggtttt ccacacggta tatgatcgca
     3661 gcgacctgat cctgcggtcg atccgtaacc tgcggaacac tctgatcgaa gagagtctgg
     3721 tggtcgcggc ggtgtgcgtg ctgttcctgt tgcacgcccg ctccgcgctg gtcgccatca
     3781 tcaccctgcc cctcggtatc ctcattgcgt tcatcctcat gcgcagcgtg ggggtggggt
     3841 cggatatcat gtccctgggc ggtatcgcca tcgccatcgg ggccatgatc gacgcggcca
     3901 tcgtcatgat cgagaacatg cacaagcacc tggagcgtgc cctcgaggcc aagggcgccg
     3961 gcggaggccg ctggctcgat acccgggtgc tgagcacggc cgagcggtgg ggcatcgtgg
     4021 tcgacgccag caaggaagtg ggcccggcac tgttcttctc gctcctcatc atcaccgtgt
     4081 ccttcatccc ggtgtttgtg ctggaagggc aggagggcag gctgttccgg ccgctggcgt
     4141 tcaccaagac ctttgccatg gcgggggcga gtctgctgtc ggtgacggtg gtgccggtag
     4201 ccatggggct cttcgtccgc gggcggatct ttcgggagca ggccaatccg ctcaaccgtg
     4261 tgctcatccg gctctaccgc ccggtgatcg acctggtgct gcggcatcgg tggggggtta
     4321 ttggcgctgg ggtgctggcg ctgaccctga cctggattcc ctggagccgg ctgggcagtg
     4381 agttctaccc accgctggac gaaggcacgc tgctcttcat gcccacgacg ctgcccggcg
     4441 tgagcgtggc ccgcgcccgc gagatcctgc ggatccagga tagc
//
LOCUS       DASWKS010000153         8693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_69354, whole genome shotgun sequence.
ACCESSION   DASWKS010000153 DASWKS010000000
VERSION     DASWKS010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8693
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69354"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..998)
                     /locus_tag="VGA78_04540"
     CDS             complement(<1..998)
                     /locus_tag="VGA78_04540"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX9893164.1"
                     /translation="MKVPLLDLTAQYAATKDAVLPALMSVIERQQFIMGPEVGQLETA
                     LAELCHTAHSIGCASGTDALLLPLMALDLQPGDEVVTPAFTFFATAGTVHNAGGRPVF
                     VDIDPETLNIDPEALAAAITPRTRAIIVVHLFGQMAPMERLMALAAQHGIPLIEDAAQ
                     AIGARRLIDGVWRMAGELGWVSGFSFFPSKNLGAYGDAGLMVCQDDQTATRLRRLRLH
                     GGAKHYFHDEVGTNSRLDTLQAAVLHAKLPFLAGWSEARRRNAARYDAGLAGGGPVRT
                     PVTDPANQHIFHQYTLQVERRDELQAFLRAREIGTAVYYPLALHLQPCFAYLGYRKG"
     gene            complement(1133..1735)
                     /locus_tag="VGA78_04545"
     CDS             complement(1133..1735)
                     /locus_tag="VGA78_04545"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020046524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX9893165.1"
                     /translation="MAPSSRTDRDFFVHESSYVDDGAIVGRGTKIWHFCHVMPGAVIG
                     EGCNLGQNVVVMPKAIIGNNVKIQNNVSIYQGVILEDDVFCGPSCVFTNVINPRSAVN
                     RKEEYQQTLVRRGASIGANATVVCGYELGEYCFVGAGAVVTGNVPAYALVVGVPARQV
                     GWVCRCGVSLAVDHGVAVCRGCGTRYREADARLGPVDPTG"
     gene            complement(1713..2675)
                     /gene="murB"
                     /locus_tag="VGA78_04550"
     CDS             complement(1713..2675)
                     /gene="murB"
                     /locus_tag="VGA78_04550"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEX9893166.1"
                     /translation="MTSARDRVFAGRLRATVRGEVRFEEPLARYSTYRIGGPATVAMP
                     ATEDDVASALWLAAEAGVDVFPLGLGSNVLLPDEGLDALVLRLGKGLDRIQRTDNPAV
                     WRLGAGLPAPLAARKTAEAGWAGLHMMVGVPGTVGGGVYMNAGCHGGQWSQVLTRAEV
                     IARNGERREIDRAHVPFAYRRSGLGDLIVLSAEVELSPGPSEELAAEVDRLFSWRQRG
                     TPFNKPCCGSVFTNPVWPVGTPEGGPRTAGQLIEAAGLKGTRVGGAEVSAMHANYFVN
                     LGEARAEDVRRLMEIARDEVERRFGLRLIPEVKVIGADGAIIKD"
     gene            complement(2672..5953)
                     /gene="carB"
                     /locus_tag="VGA78_04555"
     CDS             complement(2672..5953)
                     /gene="carB"
                     /locus_tag="VGA78_04555"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX9893167.1"
                     /translation="MPKRTDLHSILLVGSGPIVIGQGAEFDYSGTQAVRALKEEGYRV
                     ILVNSNPATIMTDPELADRTYIEPVTPEWVEKIIARERPDALLPTMGGQTALNVAMSL
                     HRAGVLARYGVELIGASERAIRIAEDREEFTQAMIRIGLRTPQGHVVHSVDEGLTTVE
                     ETGYPAILRPSFTLGGTGGGIAYNRKEFEDLLRRGLEASPVKSVLVERSIIGWKEFEL
                     EVMRDGADNVVIVCSIENLDPMGVHTGDSITVAPAMTLSDREYQVMRDASIRIIREVG
                     VAAGGCNIQFAVHPETGEQLVIEMNPRVSRSSALASKATGFPIARIGTKVAVGYRLDE
                     LPNDITRTTPASFEPVLDYVVVKIPRFAFEKFPTADPRLTTQMKSVGEVMAIGRTFKE
                     ALQKGFRGLEIDRPGWVTGPVPADDRLPDGSIEAIRSALGTPTPERLFQIKRGLLAGI
                     TEAEIAQRSLIDPWFIGQLGELVEAEREWSGLWKDRQAAWAITEAEERAAIRKMKRLG
                     FSDRQLADLRGATETEVRRRRQALGVRPSYKTVDTCAGEFPSSTPYLYSSYDEETESG
                     PKGDRTVVILGSGPNRIGQGVEFDYCCVRAALRFREMGYTTVMVNSNPETVSTDFDMS
                     DTLYFEPLTLEDVLEIVHVERPLGVVVQLGGQTPLRLARGLEAEGVPILGTSPEAIDL
                     AEDRGRFEAIVRELGVRQPRAGTATSLDQALRVAQEVGYPVLIRPSYVLGGRAMQIVY
                     DGDQLEQFFGHAIRVAPGHPVLIDQFLEDAFEADVDAISDGHRSVVGGVMQHIEDAGV
                     HSGDSACVMPPYLITEDQVEEMKRYTRAFAERLGVVGLLNVQYAIRNGIVYVLEVNPR
                     ASRTIPFVSKTTGVPLAGLAAAVMVGRSLEELGLSDDIVHPYVAVKEAVFPFNKLQGV
                     DLILGPEMRSTGEVMGIADSFGMAFAKAQASADGALPLSGAVCVTVNDHDKATVTPIA
                     RRFHELGFRVLATEGTARYLRARGIPAQKVLKAYEGRPNTVDLIVSGEVQLLINTPLG
                     KLTQQDDYTMRRAALQHGVPYTTTMSAASAACDAIIALKSRVGEVRTLQEWHELARSL
                     AADPA"
     gene            complement(5937..6884)
                     /locus_tag="VGA78_04560"
     CDS             complement(5937..6884)
                     /locus_tag="VGA78_04560"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX9893168.1"
                     /translation="MRVLVTGANGFTGGWLIRSLLQGGHEVIGAAGPIAGQRLLTPAE
                     RDQVTWVVLDVDDPGSVRACAAVAVDAVVHLAAVSSVAHSLAEPVATWRVNTVGTMSL
                     LETLAVQRRNGISDPLVLVVSTGEVYGPGSSEPRRETEPVRPVSPYAASKAAAELGGL
                     EIWHRTGLRVVVARPFPHTGPGQTARFVVPAFLERIRIARRAGAPVVKTGNLEPVRDL
                     LDVRDVTAGYLALLERGAPGEIYNVATGRGLSLEEVFFRVAERVGHHAIPELDPALAR
                     AVDIPHLVGDPEKLHAATGWSPHYTLDQTLQLMLDAEAY"
     gene            complement(6881..7846)
                     /gene="gmd"
                     /locus_tag="VGA78_04565"
     CDS             complement(6881..7846)
                     /gene="gmd"
                     /locus_tag="VGA78_04565"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016509474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX9893169.1"
                     /translation="MAKRALITGITGQDGSYLAELLLDKGYEVVGVVRRTSHHSFERV
                     EHLLGRIRVVHADLLDQHSLTMAVQEVQPDEVYNLAAQSYVPTSFAQPVLTGEFTALG
                     VTRILEALRLVCPTARFYQASSSEMFGKVREHPQNELTPFYPRSPYGVAKVYGHWITV
                     NYRESYGLHAVSGILFNHESPRRGMEFVTRKVSDAVARIKLGRSTELRLGNLDARRDW
                     GFAGDYVDAMWRMLQAPEPRDYVIGTGVMHSVRDLVQLAFDHVGLDWRRYVVSDPEFM
                     RPAEVDVLLADAALARSELRWSPQVSFQELVAMMVDADLARLASR"
     gene            8047..8238
                     /gene="rpmB"
                     /locus_tag="VGA78_04570"
     CDS             8047..8238
                     /gene="rpmB"
                     /locus_tag="VGA78_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014398134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEX9893170.1"
                     /translation="MARICAVCGKGPTTGNHVSHANNRVKRRWYPNLQTVRTLIDGEH
                     RRIRVCTRCIRSNKVTKVA"
     gene            complement(8346..>8693)
                     /gene="rplQ"
                     /locus_tag="VGA78_04575"
     CDS             complement(8346..>8693)
                     /gene="rplQ"
                     /locus_tag="VGA78_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017042856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX9893171.1"
                     /translation="RAKGRQLSRTASHKKALLNNMAASLFAHGAITTTTAKAKELRPF
                     AERLITLARRGDLHARRLVERRIKDRDVLGRLFSEIGPRFAARPGGYTRILKLGHRVG
                     DGAETARIELLAE"
BASE COUNT         1422 a         3095 c         2801 g         1375 t
ORIGIN      
        1 cctttgcgat aacccaggta ggcaaaacag ggctggagat gcagcgccag cggatagtag
       61 accgcggtgc cgatctcccg ggcccggaga aacgcctgca gctcgtcccg ccgctccacc
      121 tgcagcgtgt actgatgaaa aatgtgctgg ttggccggat cggtcaccgg cgtccggacc
      181 ggcccgcccc cggccaggcc cgcgtcatac cgggcggcgt tgcggcgccg ggcctcgctc
      241 catccggcca ggaagggcag cttggcgtgg agcaccgcgg cctgcagggt atccagccgg
      301 ctgttggtgc cgacttcgtc atggaagtag tgcttcgctc cgccgtggag ccggagccgg
      361 cgcagccggg tcgcggtctg atcgtcctga cacaccatca ggcccgcatc accgtaggca
      421 cccaggttct tgctcgggaa gaacgagaag ccgctgaccc agcccagctc acccgccata
      481 cgccagaccc cgtcgatcag acgccgggcg ccgatggcct gggccgcatc ctcgatgagc
      541 ggaatcccgt gctgagccgc cagcgccatc agccgttcca tcggcgccat ctgcccaaac
      601 agatggacca cgatgatggc ccgggtccgg ggggtgatcg cggccgcgag ggcctcggga
      661 tcgatgttga gagtctccgg gtcgatatcg acgaagaccg gccgcccgcc cgcgttatga
      721 acggtccccg cggtggcgaa gaaggtgaac gccggggtca ccacttcgtc gcccggctgc
      781 aagtcgagcg ccatcaacgg cagcagcagc gcatcggtgc cgctggcgca gccgatgctg
      841 tgcgcggtgt gacacagctc cgccagcgcg gtctcgagct gccctacctc cgggcccatg
      901 atgaactgct gccgttcgat caccgacatc agggccggga ggaccgcgtc tttggtcgcc
      961 gcgtactgcg cggtcaaatc gagcaatggg accttcaatg agccctcata ccatttgacg
     1021 attcagcgat tcagcggttt agcgaatccg gcgcctgccc caccgctaaa acgtcaaatc
     1081 gctcaatcgc tggataggac gcaacttctt gcaagcccga aacttagcag gctcagcctg
     1141 tgggatcaac gggcccgagg cgagcgtcgg cctcgcggta ccgcgtaccg cacccgcgac
     1201 agaccgccac cccgtgatcg accgcgaggg agaccccgca gcggcacacc caaccgacct
     1261 gtcgagccgg cactcccacc accagcgcgt aggccggcac gttcccggtc accacggccc
     1321 cggcccccac gaagcagtat tcccccagct cgtagccgca gaccacggtg gcgttggcgc
     1381 cgatcgaggc cccccgccgt accagggtct gctggtactc ctccttacgg tttactgcgc
     1441 tgcggggatt gatgacgttg gtgaagacgc agctggggcc gcagaacacg tcgtcctcca
     1501 gaatgacgcc ctggtagatc gacacgttgt tctggatctt gacgttgttc ccgatgatgg
     1561 ccttgggcat caccaccacg ttctggccca gattgcaccc ttcgccgatg acggcgccag
     1621 gcatgacatg gcagaagtgc cagatcttgg tgccccggcc gacgatggcg ccgtcgtcga
     1681 cgtagctgga ttcgtggacg aaaaagtcgc gatcagtcct tgatgatggc gccatcggcc
     1741 ccgatcactt tcacctccgg gatgagccgc aacccgaacc ggcgttcgac ttcgtctctt
     1801 gcgatctcca tcaaccgccg cacatcctcg gctcgcgcct ctcccagatt cacgaaatag
     1861 ttggcgtgca tggcggacac ctcggcgcca cccacccggg tccccttgag tccggccgcc
     1921 tcgatcagct gccccgcagt gcgcggcccg ccttcgggcg tgcccaccgg ccagaccgga
     1981 ttggtgaaca cgctgccaca gcagggcttg ttgaacgggg tcccgcgctg ccgccagctg
     2041 aacagccggt cgacttcggc cgccaactcc tctgacgggc cgggggagag ctcgacctcg
     2101 gcgctcagca cgatgaggtc gccgagcccg ctccgccgat aggcgaaggg gacgtgggcc
     2161 cgatcgatct cgcgccgttc cccgttgcgg gcgatgacct cagcccgggt gaggacctgg
     2221 gaccactgcc cgccgtggca gcccgcgttc atgtagaccc caccgcccac cgtcccggga
     2281 acgcccacca tcatgtggag cccggcccat ccggcctcgg cggtcttgcg ggcggcgagc
     2341 ggtgccggga gcccggcgcc gagacgccag accgcgggat tgtcggtgcg ctggatccgg
     2401 tccaggcctt tccccagccg gagcaccagg gcgtccagtc cttcatccgg cagcagcacg
     2461 ttggagccga gaccgagggg gaagacatcg acgcccgctt cggccgccag ccagagcgcg
     2521 ctggccacgt cgtcctcggt ggccggcatg gcgacggtgg ccggcccgcc gatccggtaa
     2581 gtcgagtacc gcgccagtgg ctcttcgaac cgcacctcgc cccgcacggt cgcccgcagc
     2641 cggcccgcga agacccgatc ccgcgcggag gtcacgccgg gtcggcggcg agcgaccgcg
     2701 ccagctcgtg ccattcctgc aacgtgcgca cctcgcccac tcggctcttg agcgcgatga
     2761 tcgcgtcgca ggccgccgac gcggccgaca tggtcgtggt ataggggacc ccgtgctgca
     2821 gcgcggctct ccgcatggtg tagtcgtcct gctgggtcag cttgcctaac ggcgtgttga
     2881 tcagtaactg cacctcgccc gacacgatca ggtccaccgt gttggggcgc ccctcgtacg
     2941 ccttgaggac cttctgagcc gggatgcccc gggcccgcag gtaccgggcg gtgccctccg
     3001 tggccagcac ccggaatccc agctcgtgaa agcgccgggc gatcggcgtg acggtcgcct
     3061 tgtcgtggtc attgacggtc acgcacacgg cgcccgagag cgggagggcc ccgtcggcgc
     3121 tggcctgcgc cttggcgaag gccatcccga acgaatcggc gattcccatc acctcacctg
     3181 tcgagcgcat ttccggaccg agaatcagat ccacgccctg cagcttgttg aagggaaaga
     3241 ccgcttcttt gaccgccacg tagggatgca cgatgtcgtc cgacaacccc agctcctcca
     3301 gcgacctccc caccatcacg gccgccgcca ggccggccag cggcacgccg gtggtcttgg
     3361 agacgaacgg gatggtacgc gacgcgcggg gattcacctc gagcacgtac acgatgccgt
     3421 tccggatggc gtactgcacg ttgagcagcc ccaccacgcc cagccgctcg gcaaaagcgc
     3481 gggtgtagcg cttcatctcc tcgacctggt cctcggtgat gaggtagggc ggcatcacgc
     3541 aggccgaatc ccccgagtgg acgcccgcat cctcgatgtg ctgcatcacc ccgcccacca
     3601 ccgagcgatg gccgtcgctg atggcgtcca catcggcctc gaaggcatcc tccaggaact
     3661 ggtcgatcag caccggatgg cccggcgcca cccggatcgc gtgcccgaag aactgttcca
     3721 gctggtcgcc gtcgtacacg atctgcatgg cccggccgcc cagcacgtag gagggccgga
     3781 tcaggaccgg gtaccccacc tcctgcgcca cccgcagggc ttggtccagc gaggtggcgg
     3841 tcccggcccg cggctgtctc accccgagct cccggacgat ggcctcgaac cggccccggt
     3901 cctcggccag gtcgatggcc tccggcgagg tgcccaggat gggaacgccc tcggcctcga
     3961 gtcctcgggc cagccggagc ggggtctggc cccccagctg caccacgacg ccgaggggcc
     4021 gctccacgtg gacgatctcg agcacatcct ccagcgtgag cggctcgaag tacagcgtgt
     4081 ccgacatgtc gaagtcggtg gacacggtct cggggttcga attgaccatc accgtggtgt
     4141 agcccatctc gcgaaaccgg agcgccgccc ggacacagca gtagtcgaac tccaccccct
     4201 ggccgatccg gttgggaccg gagcccagaa tcaccaccgt gcggtcgccc ttgggcccgc
     4261 tctccgtctc ctcgtcgtag gacgaataga gatagggcgt cgaggagggg aattcgccgg
     4321 cgcaggtgtc gaccgtcttg tagctgggcc ggacccccag cgcctgtcgc ctccggcgca
     4381 cctcggtttc ggtcgcaccc cgcagatcgg cgagctgccg gtcggagaat cccagccgct
     4441 tcatcttgcg gatcgcggcc cgctcttccg cttcggtgat ggcccacgcc gcctggcggt
     4501 ccttccagag cccgctccac tcgcgctctg cctccaccag ctcgcccagc tgtccgatga
     4561 accaggggtc gatcagcgat cgttgagcga tctccgcttc ggtgatgccg gccagcagcc
     4621 cccgtttgat ctggaacaac cgttccgggg tgggagtgcc taacgcgctt cggatggctt
     4681 cgatgctgcc gtccggcagc cggtcgtccg ccggcaccgg cccggtcacc cagccgggcc
     4741 ggtcgatctc gaggccgcgg aagcccttct gcagcgcctc cttgaaggtc cggccgatcg
     4801 ccatcacctc gcccaccgac ttcatctggg tggtgagccg cggatcggcg gtggggaact
     4861 tttcgaaggc gaaacgcggg atcttcacca ccacatagtc gagcaccggc tcgaacgacg
     4921 ccggggtggt ccgggtgatg tcgttcggca gctcgtccag ccggtatccc acggccacct
     4981 tggtgccgat gcgcgcgatg gggaatccgg tggccttcga ggccagcgcc gacgagcgcg
     5041 acacccgggg attcatctcg atcaccagct gctccccggt ctcggggtgc accgcgaact
     5101 ggatgttgca gccgccggcg gccacgccca cctcgcggat gatccggatc gaggcgtcgc
     5161 gcatcacctg gtactcgcgg tcggagagcg tcatggccgg cgccaccgtg atggaatcgc
     5221 cggtgtgtac acccatcggg tcgaggttct cgatggagca gacgatgacc acgttatcgg
     5281 ccccgtcccg catcacctcc agctcgaatt ccttccagcc gatgatgctg cgctccacca
     5341 gcaccgactt gaccggcgac gcctcgagac cgcgccgcag caggtcctcg aattccttcc
     5401 ggttataggc gatgcccccg ccggtgcccc ccagggtgaa ggagggccgg aggatggcgg
     5461 gatagccggt ctcctccacg gtggtcagtc cttcgtccac cgagtgcacc acgtgaccct
     5521 gcggggtccg caacccgatc cggatcatcg cctgggtgaa ttcttcccgg tcctcggcga
     5581 tccggatggc gcgctcgctg gccccgatca gctccacgcc gtagcgggcc agcactccgg
     5641 cccggtggag cgacatcgcc acgttgagcg cggtctggcc gcccatggtg ggcagcagcg
     5701 catcgggccg ctcccgggcg atgatcttct cgacccactc cggggtcacc ggctcgatgt
     5761 aggtccggtc ggccagctcg ggatcggtca tgatggtggc gggattggag ttcaccagga
     5821 tgacccggta gccctcctct ttgagcgccc gcaccgcctg ggtgccggaa tagtcgaact
     5881 cggcgccctg gccgatgacg atcggccccg acccgaccag caggatggag tgaagatcag
     5941 tacgcttcgg catcgagcat cagttgcagg gtctggtcca gcgtgtagtg gggcgaccaa
     6001 ccggtcgcgg cgtggagctt ctccgggtcg cccacaagat gcgggatgtc aacggcccgc
     6061 gcgagggcgg gatcgagctc gggaatggcg tggtgtccca cccgctccgc cacccggaag
     6121 aacacttcct cgagcgagag cccgcgcccc gtggcgacgt tgtagatctc gcccggcgcg
     6181 ccccgctcca gcagcgcgag atagcccgcc gtcacatccc gcacgtcgag cagatcgcgc
     6241 accggttcca gattcccggt cttgacgacc ggagcgccgg cccgccgggc gatccggatc
     6301 cgttccagaa aggccggcac gacgaatcgc gccgtctggc cgggcccggt atgcggaaac
     6361 ggccgcgcca ccaccacccg gagcccggtc cgatgccaga tctcgagccc gcccagctcc
     6421 gccgccgcct tgctggccgc gtagggggaa accggccgga ccggttcggt ctcgcgccgt
     6481 ggttcggacg accccggccc gtagacctcg ccggtggaga ccaccagcac cagaggatcg
     6541 ctgatcccgt tacgccgctg gaccgcgagg gtctccagca gcgacatagt acccaccgta
     6601 ttgacccgcc aggtggcgac cggctcggcc agggagtgcg ccaccgagga gaccgccgcc
     6661 agatgcacca ccgcgtccac cgccacggcg gcacaggccc ggaccgagcc cggatcatcg
     6721 acgtcgagca ccacccaggt gacctggtcc cgttccgccg gggtcagcaa tcgctgcccc
     6781 gcgatcggtc cggcggctcc gatgacctcg tgaccgccct gcagcaggga ccggatcaac
     6841 catccgccgg tgaagccgtt ggccccggta accaggaccc tcatcggctg gccagccgag
     6901 ccagatccgc gtccaccatc atggccacca gttcctggaa cgacacctgg ggtgaccatc
     6961 tcagctcgga ccgggccagg gcagcatcgg ccagcagcac gtcgacctcg gcgggtcgca
     7021 tgaattccgg atcgctgacg acgtacctgc gccagtccag ccccacatga tcgaacgcga
     7081 gctgcaccag atcccgcacg ctgtgcatca cgccggtgcc gatcacgtag tcccggggct
     7141 cgggcgcctg cagcatccgc cacatggcgt caacgtaatc gcccgcgaag ccccagtcgc
     7201 gccgggcgtc caggttgccc agcctgagct cggtggaccg gcccagcttg atgcgagcca
     7261 ccgcgtcgga caccttccgg gtcacgaact ccatcccgcg ccggggcgat tcgtggttga
     7321 acagaatccc gctcaccgcg tgcaggccgt agctctcgcg gtagttcacc gtgatccagt
     7381 ggccatagac cttggccact ccgtacgggg agcggggata gaacggcgtc agctcgttct
     7441 ggggatgttc ccgaaccttg ccgaacatct ccgaggagct cgcctggtaa aagcgcgcgg
     7501 tgggacagac cagccgcagg gcctcgagga tccgggtgac gcccagcgcg gtgaactctc
     7561 cggtgagaac cggctgcgca aacgaggtgg ggacgtagga ctgggccgcc aggttgtaca
     7621 cctcgtccgg ctgtacttcc tgcaccgcca tagtcaggga gtgctggtcg agcagatcgg
     7681 cgtgcaccac ccggatccgt cccaggagat gctccacccg ctcgaagctg tggtggctgg
     7741 tgcgccggac gacacccacc acctcgtatc ccttgtcgag gagcaactcg gcgagatatg
     7801 agccgtcctg accggtgatt cccgtgatca gggcgcgctt tgccacccgg cccctccctc
     7861 ttcccgatcg aagctggtcg aagttggtcg aaggcggtcg aagacggctg tgatcgatcg
     7921 aaaacgcgga acctccttcg actgtcttcg accgacttcg accgacttca acgcttgtgt
     7981 aagtgtcatg cgctgcttag gtttagaggt tgtccaccaa gtagccgata acggcagggg
     8041 attcaaatgg ctcgtatctg cgccgtgtgc ggcaagggcc cgactaccgg gaaccacgtc
     8101 agccacgcca acaaccgggt gaaacggcgt tggtatccca acctccagac tgtccggacc
     8161 ctgatcgacg gcgagcaccg ccggatccgg gtgtgcaccc gctgcatccg aagcaacaag
     8221 gtgaccaagg tggcctgaac cggcctgccg cgccgcggca gcggcgcggg atcttggcag
     8281 gaagctagcc gaaaaaaggg gaccccaacg ggtccccttt gcattgccgg aatccggtgg
     8341 cgccatcact cggcgagcag ttcgatccgg gcggtctcgg cgccgtcacc aacccgatgg
     8401 cccagtttga gaatccgggt gtagccaccc gggcgagcgg cgaagcgggg cccgatctcg
     8461 ctgaagagcc gccccagcac gtcgcggtcc ttgatccgcc gctccaccag ccggcgggca
     8521 tgcaggtcgc cccggcgcgc cagcgtaatg agccgttccg cgaacggccg cagctccttg
     8581 gccttggcgg tcgtggtggt gatggcaccg tgggcgaaga ggctcgccgc catattgttg
     8641 agcagggcct tcttgtggct ggccgttcgg ctcagctgcc ggcccttggc gcg
//
LOCUS       DASWKS010000154         5551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_810094, whole genome shotgun sequence.
ACCESSION   DASWKS010000154 DASWKS010000000
VERSION     DASWKS010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810094"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VGA78_04580"
     CDS             <1..289
                     /locus_tag="VGA78_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893172.1"
                     /translation="AKAVAGARAFGAYAEDGTFFRLREASLTYNAPASVARVIGARSG
                     SITLSARNVFMLSGFDSWDPENVTQSQDAANYNFFQLRQPLYLVLRFNLGF"
     gene            292..1614
                     /locus_tag="VGA78_04585"
     CDS             292..1614
                     /locus_tag="VGA78_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893173.1"
                     /translation="MRTLTTTTVLLLALGAGACSRDEILEVETPDIIDSGALDNPQGV
                     QALYAGAISDFVMMMDNGASGIAGVPNGIALSLVSALFTDESMHASTPPAVREWDLRN
                     VLATNTTTPAVFLNLQRARARAANAAARVTVVVGAADVRVGELLAIEGFAFILLAEHY
                     CSAVPISSLDGPTFGPAQSTTELLDAALTRLTSAAASTGGVARVANLIAVLRGRALLN
                     KGDFAGAAAAVASVPTDYAYQIFHSTTTPRQTNQIPVQFGADIYSVPTGEGTNGLDYS
                     TAADPRVPVLNTGLSRNDGVTPMTQFRKYTSQADPVIHASGIEARLIEAEAALKAGDA
                     AGWLTTLNAIRTTVTGLGPLADPGSADARVDLTFRERAFWMYLTAHRLGDLRRLVRQY
                     SRAAESVFPTGGYHKQGLTRGTQVTFVIPQPEQNNPEFDPTACNALNP"
     gene            1685..2854
                     /locus_tag="VGA78_04590"
     CDS             1685..2854
                     /locus_tag="VGA78_04590"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX9893174.1"
                     /translation="MPGLQSCYVDPAALDRDPYPILHRLRRETPIAWVEPAGMWFVTR
                     YDDVVEVLRDPDRFSTDAPGSTIQDTFGRQMLSAEGEEQRRYKSACAPPFTTRAVRDD
                     AGPRVAALVAGLVDRFEGAGRTELRTTLAGPLALATVVMVLGLSEEYHPAIRDWYDAF
                     AASLANFQRDGDIRRRGQAAVGAFRRAVEPALAAADGLLGTLARAHPRVLSDDEILRN
                     TLIILFGGIETTEATILNSVWALLRNPDALTVVRADRGLLPVAIEEAMRWEPAVQTCT
                     RHATRHTDLRGVAIDAGDTVQCMIGGANRDPDKFPEADRYDFRRENAGQHVSFGVGRH
                     FCLGAALARLETRLTIEALLDRCPGLSLDPERDTPPSGAEFRKPATLHVVWSRHA"
     gene            2847..4460
                     /locus_tag="VGA78_04595"
     CDS             2847..4460
                     /locus_tag="VGA78_04595"
                     /inference="COORDINATES: protein motif:HMM:NF004837.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9893175.1"
                     /translation="MLDGLMMDWPLTLTHFLDRAGRYWSRSAIVTRTADGTHRYTFGD
                     WHGRVGRLAGALTRLGIGSGDRVATFAWNSYRHYEVYFAAPCMGAVLHTVNIRLFPEQ
                     MAFVFNHAEDRVVFVDASVWPVFEKLRPQLKTLEHVIVMDDVGQGVPPGTIDYEAMLA
                     AEPADFAWPRLTEQQAAGLCYTSGTTGNPKGCLYSHRALVLHSLGIGYGGLYLYPHDR
                     ILSIVPMFHVNAWGLPFGAAMVGCDVVFPSRFMQPGDLVDLIASERVTYVGGVPTIVG
                     AMYQALRQQPRDVSSLRLMTVGGSALPRSLLEGFERDFGVKLMQGWGMTEMSPVGTLN
                     ELKPDMSSWPLEAQTRQRLKQGLPLPLVEVRIMAEDGTEQPWNGTATGELEVRGPWVI
                     RDYYHEPRSAESFHDGWFKTGDIAAIDAEGFVQLVDRSKDLVKSGGEWISSVDLENAI
                     MGHPKVAEAAVIAVAHPKWTERPLACVVPRDETLTRQEVLEFLRGKVADWWLPDDVVF
                     IDQIPKTSVGKFDKKVLRARYQDYELPTS"
     gene            4654..>5551
                     /locus_tag="VGA78_04600"
     CDS             4654..>5551
                     /locus_tag="VGA78_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893176.1"
                     /translation="MVLLTALLLTPLAAQDTTLVLRGATIYTAAGAPIRNGTIVVRGG
                     KITAVGSSVSVPAGARVIDLAGKSIIPGMIDEHSHVGATPTDLNDAPMVIGPQHRFLD
                     ALNLEDPDWKDAVRGGVTTVITGPGSGENVSGQAIVIKTFGTDLSRRIVTEWGGMKFA
                     MGAKSSSRYPTTTMGVAANLRSYLIKTQEYLASWKRWDSGGKEGAPPARDLGYEAMGQ
                     VLAGKNRVRAHVHSAHDVMTILRLKDEFGFDLTLHHSTDAYKVADEIARRKVNAVVLP
                     LGPRIGISEDAMAGPAVLWRAGV"
BASE COUNT          920 a         1823 c         1864 g          944 t
ORIGIN      
        1 ggccaaggcg gtggcggggg cgcgcgcctt cggcgcctac gccgaggacg gcaccttctt
       61 ccggttgagg gaagcgagcc tcacctataa cgcgccggct tcggtggccc gggttatcgg
      121 cgcccggagc ggcagtatca cgctgagcgc ccggaacgtg ttcatgctca gtggcttcga
      181 cagctgggat ccggagaacg tgacccagtc tcaggatgcc gccaactaca atttcttcca
      241 gctgcgccag ccgctctact tggtgctgcg cttcaacctg gggttctgac catgcggacg
      301 ctcacaacta ccacggtgct gctcctggcc ctgggcgctg gcgcctgcag ccgggacgaa
      361 atcctcgagg tcgagactcc ggacatcatc gacagcggtg cgctggacaa cccgcagggg
      421 gtccaagcgc tctacgccgg agcgatctcc gatttcgtga tgatgatgga caacggtgca
      481 tccgggatcg ccggggtgcc caacgggatc gccctgtcgc tcgtctcggc tctttttacc
      541 gacgagtcca tgcacgccag caccccgccc gccgttcggg agtgggacct gcgaaacgtc
      601 ctggctacca acaccacgac tcccgctgtc ttcctgaatt tgcagcgagc ccgggcccgg
      661 gcagccaatg ccgctgcccg ggtgacggtg gtggtgggcg ctgccgacgt cagggtgggc
      721 gaactgcttg cgatcgaagg gttcgctttc atcctactgg cggagcatta ctgctcggcg
      781 gttccgatta gcagtctcga cggaccgacc tttggccccg cccagagcac caccgagctg
      841 ctggacgccg cgctgacgcg gctgacctcg gcggcggctt ccaccggcgg cgtcgcccgg
      901 gtggccaacc tgatcgcggt cctgcgaggt cgggccctgc tcaacaaggg cgattttgcc
      961 ggggctgccg ccgccgtggc ctcggtgccg accgactacg cgtaccagat cttccactcc
     1021 accaccacgc cgcggcagac caatcagatc ccggtgcaat tcggcgcaga catctactcc
     1081 gtgccgaccg gtgaagggac caacggattg gattattcga ccgcggcgga cccgcgggtg
     1141 ccggtgctca acaccggcct gagccggaac gacggcgtga caccgatgac ccagtttcgt
     1201 aaatacacca gccaggccga tccggtcatt catgccagcg gcatcgaggc ccggttgatt
     1261 gaggccgagg cggcgctcaa ggccggcgac gcggcgggct ggctgacgac gctgaatgcc
     1321 atccgcacca cggtaaccgg acttggtccg ctggcggatc ccggctccgc cgacgcccgg
     1381 gtagacctga ccttccggga gcgcgccttc tggatgtatc tgacggcgca ccggctgggt
     1441 gatctccgcc ggctggtgcg gcagtacagc cgggcggcgg aatcggtgtt ccccaccggg
     1501 ggatatcaca aacagggact cacccgggga acccaggtga cgttcgtcat tccccagccg
     1561 gagcagaaca atcccgagtt cgatcctaca gcctgcaatg ccctgaaccc atagcctaga
     1621 aagctccgcg agtgctgcga gtgccgggaa gtcctgaccc ggcgttcgca gcacgctctg
     1681 cctcatgcct ggtctgcaat cctgttacgt cgatccggct gccctggacc gcgatccgta
     1741 cccgatcctg catcggctcc gtcgcgagac tccgatcgcg tgggtcgaac cggcggggat
     1801 gtggttcgtg acccgctatg acgacgtggt cgaggtgctg cgcgacccgg atcgcttctc
     1861 gaccgacgcg ccggggtcca ccatccagga cacgttcggt cgtcagatgc tctccgcgga
     1921 aggtgaggaa cagcgacgct acaaatccgc ctgcgcgccg cccttcacca cccgggcggt
     1981 gcgggacgat gccggaccga gggtggcggc tctggtggcc gggttggtgg atcggttcga
     2041 gggagccggc cggaccgagc tcaggaccac cctggccggc ccgttggcgc tggccaccgt
     2101 ggtgatggtg ctgggacttt ccgaggagta tcatcccgcc attcgggact ggtacgatgc
     2161 gttcgccgcc tcgctggcca acttccaacg cgacggcgac atccgccggc gagggcaggc
     2221 agcggtcggc gcatttcgcc gcgcggtgga gccggcgctg gcggcggccg atggactgct
     2281 ggggacgctg gcccgggctc atccccgggt gttgagcgac gacgagatcc tccggaatac
     2341 gctgatcatc cttttcgggg gtatcgaaac caccgaggcg acgattctca attcggtctg
     2401 ggcgctgctc cggaaccctg acgcgctgac ggtggtgcgg gccgatcgcg gtctgctgcc
     2461 ggtcgccatc gaagaggcca tgcggtggga gcccgcggtc cagacctgca cccgccatgc
     2521 taccaggcac accgacctcc ggggggtggc catcgatgcc ggcgacacgg tgcagtgcat
     2581 gatcggcgga gccaaccggg accctgacaa gtttcccgag gccgaccggt acgatttccg
     2641 gcgcgagaac gccgggcagc atgtgtcgtt cggggtcggc cggcatttct gtctcggggc
     2701 cgcgctggcc cggctggaga cccgcctgac gatcgaggcg ctgctcgatc gctgtcccgg
     2761 gttatcgctc gatccagaga gagacactcc gccgtccggc gcggaattcc gcaagcccgc
     2821 gacccttcac gtggtctgga gccgccatgc ttgatggcct gatgatggat tggccgctca
     2881 ccctcaccca tttcctggac cgggccggcc gctactggtc gcggagcgcc atcgtcactc
     2941 gcaccgccga cggaacccac cgctacacct tcggcgactg gcacggccgg gtcgggcggc
     3001 tggccggcgc gctcacccgc ctgggcatcg gctcgggtga ccgggtggcg accttcgcct
     3061 ggaactccta ccggcattac gaggtgtact ttgcggcgcc ttgcatgggc gccgtgctcc
     3121 acacggtgaa catccggttg tttcctgagc agatggcgtt cgtcttcaat cacgccgaag
     3181 accgggtggt cttcgtcgac gcgtcggtct ggccggtgtt cgagaagctg cggcctcagc
     3241 tcaagaccct ggagcacgtc atcgtcatgg acgacgtagg gcagggcgtt ccgcccggta
     3301 ccatcgacta cgaggcgatg ctggcagccg aaccggccga tttcgcctgg ccgaggctca
     3361 ccgaacagca ggccgccggt ctctgctaca cctccgggac aaccgggaat ccgaagggat
     3421 gtctgtactc ccaccgggca ctggtcctgc acagcctcgg catcgggtac gggggcctgt
     3481 acctgtatcc ccatgaccgg atcctctcga tcgtcccgat gttccacgtg aatgcctggg
     3541 ggctgccgtt cggtgccgcg atggtcgggt gtgacgtggt cttccccagc cggttcatgc
     3601 agccgggaga tctggtggat ctgatcgcga gcgagcgggt gacgtatgtc ggcggcgtgc
     3661 caactatcgt gggggccatg taccaggcac tgcggcagca accgcgcgac gtttccagct
     3721 tgcgcctgat gaccgtggga ggttcggccc tgccccgctc gctgctggag ggtttcgagc
     3781 gtgatttcgg ggtgaagctg atgcagggct gggggatgac ggaaatgtct ccggtcggga
     3841 ctctcaacga gctcaagccc gacatgagct cctggccgct cgaggcccag actcggcagc
     3901 ggctcaagca gggcctgccg ctgccgctgg tggaggtccg gatcatggcg gaggacggga
     3961 ccgaacaacc ctggaacggg accgctaccg gggagctgga ggtccgaggc ccctgggtca
     4021 tccgggatta ctaccacgag ccccggagcg cggagtcctt ccatgacggc tggttcaaga
     4081 ccggcgatat cgccgcgatc gacgccgagg gcttcgtgca gctggtggac cggtccaagg
     4141 atctggtgaa gagcggcggc gaatggatct cgagcgtcga tctggagaac gcgatcatgg
     4201 gccaccccaa ggtggcggag gcggccgtca tcgcggtggc ccatcccaaa tggaccgaac
     4261 ggccgctggc ctgcgtggtt ccccgcgacg agaccctcac ccggcaggaa gtgctggagt
     4321 ttctgcgcgg caaggttgcg gactggtggt tgcccgatga cgtggtcttc atcgaccaga
     4381 tccccaagac cagtgtgggc aagttcgaca agaaggtatt gagggcacgt tatcaggatt
     4441 atgagctgcc tacttcctga aggttccgcg ttccacgttc cccgtgccac gtacggtgct
     4501 gcgtgcgttg ccaagtgccc ggtgctgggt acgagtcctg ccaagcatat ggaccaggca
     4561 tactccgcgc acctagcaca cggcaccaag caccgcacct agcaccgcac gaggaacctg
     4621 gaaccaggaa ccaggaaccc tgaaaggcct aacatggtac tactcacagc attgctgctg
     4681 acgccgcttg cggcccaaga cacaaccctc gtgttgcgcg gtgccaccat ctacaccgcc
     4741 gccggcgctc ccatccggaa cgggaccatc gtggtacggg gaggcaagat caccgcagtg
     4801 ggctcgtcgg tctcggtgcc ggcgggggcc cgcgtgatcg atctggccgg caagagcatc
     4861 atccccggta tgatcgacga gcactcccac gtgggcgcca cgccgaccga tctgaacgat
     4921 gcccccatgg tgatcggtcc gcagcatcgc ttcctggacg cactcaatct ggaggatccg
     4981 gactggaagg acgcggtgcg gggcggggtc accactgtca tcaccgggcc tggcagcggc
     5041 gagaacgtga gcggccaggc catcgtcatc aagaccttcg ggaccgacct gagccgccgc
     5101 atcgtcaccg agtggggcgg gatgaagttc gcgatggggg ccaagtcgtc cagccgctat
     5161 cccaccacca cgatgggcgt cgccgcgaat ctgcggagtt atctcatcaa gacccaggaa
     5221 tacctcgcct cctggaagcg ctgggactcg ggcgggaagg agggtgcgcc tccggcccgc
     5281 gacctgggct acgaggcgat gggccaggtg ctcgccggca agaaccgggt acgggcccac
     5341 gtgcattcgg cccacgacgt catgaccatc ctgcgactca aggatgagtt cggattcgat
     5401 ctcacgttgc atcactccac cgatgcctac aaggtggcgg acgagatcgc ccggcggaaa
     5461 gtgaatgccg tggtgctgcc gctcgggccc cggatcggga tctcggaaga cgccatggcc
     5521 gggccggccg tgctgtggcg ggcgggggta c
//
LOCUS       DASWKS010000155         6812 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_444884, whole genome shotgun sequence.
ACCESSION   DASWKS010000155 DASWKS010000000
VERSION     DASWKS010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6812
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444884"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="VGA78_04605"
     CDS             <1..596
                     /locus_tag="VGA78_04605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893177.1"
                     /translation="VVALLWGGEDENTMTDADPATERFGYGYGIPVHRIEDDMSTRLG
                     FTLRVLPTAGEGIVNTVPEFAGVESPIRAERELERDLDRSERGRVFLQAWLRHSDELN
                     AIVQNQRRVATVWQRHNGSALLRLVAQAPYEPTRPLPTELDGLPVREGLVCFLDQVER
                     YASDNLKRDLSAHRGLLLSLPGRTYNDVLRQVGEPLQ"
     gene            593..2059
                     /locus_tag="VGA78_04610"
     CDS             593..2059
                     /locus_tag="VGA78_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893178.1"
                     /translation="MKRSEEEYRALAKRAAEQLLKLPGVHSVGIGGRVRHGQPTGELV
                     VKVFVTRKMSPDELPPNARVPPDIEGLPTDVEECPPFENKAGLVPAKRPFPDTTQAYL
                     GGDKDRVRPVKGGTELQAKDGGSAGTLGFMARVPADPKRIMAVTNHHVLFDEGPATLG
                     RLVGQAEPTNSSTKCCKGLIGNCLASHYDADVDAALVQLDAELEWVAEIKEIGFIRGR
                     FDLTTAEAQTQVYQIRMRGRTLGLVGGTLRSINTSGTAGTRSYTNGIVIKPNPDATLT
                     GKLYFGDFGDSGAALVNDQNDVVGLYTSGPISGAEEGFGKGFPIKDLIDKFKNADSIT
                     IEVASATRLGQVQTVPRAAAANAAPDAGLEVSPAIRRLQTDLDRTPQGRDLIAVWLHH
                     SEELNRLVNTERRVAAAWRRANGPEVFRRVIAAAEEPINPLPSDIGGRPAAAVLDEFL
                     REVERYATPALRRDLQRHRPLLASLPGRTYDEVMHDLH"
     gene            2096..5512
                     /locus_tag="VGA78_04615"
     CDS             2096..5512
                     /locus_tag="VGA78_04615"
                     /inference="COORDINATES: protein motif:HMM:NF042646.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6603 domain-containing protein"
                     /protein_id="HEX9893179.1"
                     /translation="MSGQAGTLEQLALELAAILGQVGSRMKSGRVRETLGLLGVYFPE
                     QLLADAGFVAATDATATAAQAVQPEVAALLAEIEADDTVSIVARVAAVLTRTGQTIAS
                     FANVANQLQAVGPTLPGVTAQQVNDLVADFPKKLLDLFIASALDLIPAVGGTLTLLGI
                     VEKVEIPGDSGNPTKPRFEKTELHLNRILDFANRPGDYLTSRFAWGDPGFDGTVLLQG
                     LGRLLERLSFPTTYFPPSGGQPARLDAFAFDLTADSSTAPPGLRIDVLLPIGGNVDVP
                     LPGPTPAWLFHAKFDGKLTLGTSATLRPPFTLEITPSSTSGQIDGVAQLVIEGRPAAP
                     FILLGQAGGSRLEVGRVDGQVGVRFNWSSVTGKATVEPVVGASVTGGRLLVDASQGDG
                     FLTTILAGIKIDAPFDLGFTWSLSGGIQFQGSGMLEIQIPLNLSLGPLHFIRAYIGAG
                     FKDGTVPIELSAAISAQIGPVAAAVDRLGVRATLSFPPGGGNVGPVQLDFMFKPPTGV
                     GLAIDAGPISGGGFISYDEPNGRYAGVLALEIFSVKVSAIGLIDTKLPDGRTGYSFLI
                     IISVEFFPIQLGFGFTLIGVGGICGIHRTINAEALRLGVYAGSLDSIMFPRDPVRNAP
                     QIISDLSRIFPPEEGQFVFGPMAKIGWGTPTLVEISLGIIIELPDPIRIALLGQIAAF
                     FPERRAAIVEIHIDFVAMIDFGAKLLSLDATLRDSRIVLFTLTGDMAFRLCWGDQPNF
                     AIALGGFHPHFQPPPGFPALRRLTLGLGAGDWIRISCSTYQALTSNSLQFGARAELYI
                     SVGVFVRGWIGFDALIIFSPFSFEVTFTAGLEIGVGDLQLAGVSVEGTLSGPTPWRVR
                     GEATISLFFFDLSVDVDVKFGSEEKAVLAPADPWPPLRDALKEPRNWAALPAAGSLPI
                     VTLSLPPGVTATVIDPAGKMTWKETVAPLDRTLSRFGNSGTPAPVKFTVDRVTVGTSP
                     AAFTTVRDFFASAQFEELTDAEKLSRPSFEPMQAGVEVASAAVKAGPSISAPLTYETD
                     YDDPEHGPSLRALFVVPLWMQQGLLLNSGGRQSGLVQAGTRAFAAPTKLAQAEEQFVI
                     VSTDDLAVKAEISAPTTKGAAHQALKAYVATRPAERDALQVVPVHELEDV"
     gene            5509..>6812
                     /locus_tag="VGA78_04620"
     CDS             5509..>6812
                     /locus_tag="VGA78_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893180.1"
                     /translation="MTLTVGQFAYLPWLKTGVGAEIARVDGTPGSEPRVSLPIQVRFN
                     SDPALADGVTVELFGPGEVTGFDVRTVVRTWPKAGVMDAECNYFPIIEFDQADLPWRY
                     TPARATAGDRLTPWLTLIVLEDSEIKRSVPPSSDGHLGTVEIKDAKALPKSKQLWAWA
                     HVQVSGETTVDEARAAALMSARSPAIRSRLVAPRRMEPHRGYTALLVPAFKRGVMAGL
                     GQDPGSTDALALAWSDTPGGPLTLPVFYQWRFGTGPLGDFESLARLIEPFEAPESVGI
                     RDMDVSAPSPGFPAANTSPLGLRGMLTALNTPDTVWNSGARQGWIARLKALLNLPAER
                     AVNPNTPRTVTPPLYGQWPAATDRCDADIQPGRPLWFQELSVDPRLRTGAGLGTRVVQ
                     THQESLMASAWDQVERVRQLNEELRQAQLARELALKLASRHV"
BASE COUNT         1133 a         2316 c         2248 g         1115 t
ORIGIN      
        1 aggtggtggc gttgctctgg ggtggtgaag acgaaaacac gatgaccgat gccgatccgg
       61 cgacggaacg ctttgggtac ggctacggta tcccggtcca ccggatcgag gacgacatga
      121 gcacgcgcct cggtttcacc ctccgggtcc tgccgaccgc cggcgaaggc attgtgaata
      181 ccgtgcccga gttcgccgga gtcgagtccc ccatcagggc cgagcgcgag ctggagcggg
      241 atctggaccg cagcgagcga ggccgagtct ttctccaggc ctggctccgg cactcggatg
      301 agctcaacgc catcgtgcag aaccagcgac gggtcgcgac ggtctggcag cggcacaatg
      361 gatcggcact ccttcgcctg gtggcacagg caccttacga accgacccgg ccgcttccca
      421 ccgagctcga cggcctcccg gtccgcgagg ggctggtgtg cttcctggat caggtcgagc
      481 gctacgccag cgataacctc aagcgcgatc tgagtgccca tcgcggattg ctgctctccc
      541 tccccggccg aacctacaac gatgtactga ggcaggtcgg ggaaccgctg caatgaaacg
      601 gagcgaggag gaataccgcg ccctggccaa acgcgccgcg gagcagctcc tcaagctgcc
      661 gggggtccac agcgtcggga tcggtggtcg ggtaaggcac ggccagccca ctggtgaact
      721 ggtggtgaag gtttttgtga cccgaaagat gtcccctgac gagctcccgc caaatgcccg
      781 ggtgccgccc gacatcgagg ggctgccaac cgacgtagag gagtgcccgc cgttcgagaa
      841 caaagcagga ctggttcccg ccaagcggcc tttcccggac accacgcagg cgtacctcgg
      901 gggggataag gaccgggtac ggcctgtcaa aggtgggacc gaactccagg cgaaggacgg
      961 cggatcggcc ggcacgctgg gattcatggc gcgggtgccg gccgatccca agcgtatcat
     1021 ggcggtgacg aaccaccacg tactgttcga tgaaggcccc gccacgttgg gaaggctggt
     1081 gggtcaggca gagcccacca acagcagcac caagtgttgc aaggggctga tcggcaactg
     1141 cctcgccagc cattacgacg ccgacgtgga tgcggccctg gtccagctcg atgcggagct
     1201 cgaatgggtc gccgagatca aggagatcgg attcatccgg ggccggtttg atctcacgac
     1261 cgccgaggcc cagacccagg tctaccagat ccgcatgcgg gggcgcaccc tgggcctggt
     1321 gggaggaact cttcggtcga tcaacaccag cggcacggcg ggaaccagaa gctacaccaa
     1381 cgggatcgtg atcaagccga accccgacgc cacactcacc ggcaagctgt acttcggcga
     1441 cttcggagac tcgggtgcgg cgctggtcaa cgaccagaac gatgtcgtcg gcctctacac
     1501 cagcggaccg atctcgggtg ccgaggaagg gttcggcaag ggtttcccga tcaaggatct
     1561 gatcgataag ttcaagaacg cggacagcat cacgatcgaa gtggcctccg ccaccaggct
     1621 cggtcaggtg caaaccgttc ccagggcggc ggccgcgaac gcagcgcccg atgccggtct
     1681 cgaggtgtct cccgcgatcc gccggctcca gaccgatctc gaccgcaccc cccagggacg
     1741 cgatttgatc gccgtctggc tgcaccattc cgaagagttg aatcgcctgg tcaataccga
     1801 gcggcgggtc gcagctgcct ggcgccgggc aaacggcccc gaggtcttcc gccgggtcat
     1861 cgccgccgcc gaggaaccca tcaacccgct tccctcggat atcggcggca ggccggccgc
     1921 ggcggtgctg gacgagtttc tcagggaggt cgagcgttat gccactccgg cgcttcgccg
     1981 cgacctccag cgacatcggc cgctcctcgc gagtctgccg ggccggacct acgacgaggt
     2041 catgcacgac ctgcactgac tgccccgccg gcgagtgctg ccggaaggaa acggcatgag
     2101 cggtcaagcc ggtacactgg aacagctggc gctcgaactg gccgccatcc tgggccaggt
     2161 cgggagccgg atgaagagcg gccgagtcag ggagacgctg ggtctgctcg gggtctattt
     2221 cccggaacaa ctcctggccg atgccggctt cgtcgcggcc accgacgcga ccgccaccgc
     2281 cgcgcaagcc gtccagcccg aggtggccgc gctcctggcg gagatcgaag ccgatgatac
     2341 cgtttcaatc gtcgcccggg tggccgcggt tctgacccgc accggacaga ccatcgcgag
     2401 cttcgccaac gtcgcgaatc agctccaggc ggtgggaccg acgctccccg gcgtcacggc
     2461 ccagcaggtc aatgacctgg tcgctgactt cccgaaaaag ctgctcgatc tcttcatcgc
     2521 gtcggccctc gacctgattc ccgccgtggg cggcaccctc accctcctcg gcattgtcga
     2581 gaaggtcgag atcccgggcg actccggcaa cccgaccaag ccgcggttcg agaagacaga
     2641 gctgcacctg aatcggatcc tcgatttcgc gaaccgcccc ggcgactacc tcaccagccg
     2701 gtttgcctgg ggagatccgg gcttcgatgg aaccgtgctg ctccaggggc tcgggcgtct
     2761 gctcgagcga ttgagtttcc ccaccaccta cttcccgcca tcaggaggcc agccggcccg
     2821 gctcgatgcc tttgcgttcg acctgacggc cgattcctcg acggccccgc caggcctccg
     2881 gatcgatgtg ctgctcccga tcggcgggaa tgtcgatgtg ccgctcccag gtcccacgcc
     2941 cgcctggctc ttccacgcca agttcgacgg gaagctgacg ctgggaacga gcgccacctt
     3001 gcggccccca ttcacgctgg agatcacacc gtccagcacc agcggccaga tcgacggcgt
     3061 ggcgcagctg gtgatcgagg gacggccggc agcgccgttc attctcctgg gtcaggcggg
     3121 gggcagccgc ctggaggtgg gacgggtcga cggccaggtg ggtgttcggt tcaactggag
     3181 cagcgtgacc ggcaaggcaa cggtcgaacc ggtggtgggg gccagcgtca ctgggggacg
     3241 gctgctggtc gacgccagcc agggcgatgg gttcctgacc acgatcctcg ccggaatcaa
     3301 gatcgatgca ccgttcgatc tagggttcac ctggagcctg tcgggtggca tccagttcca
     3361 gggcagcggg atgctcgaga ttcagattcc gctcaacctc tcgctgggcc ctctgcactt
     3421 catccgcgcc tacatcggtg ccgggttcaa ggacggtacg gtcccgatcg agctgtcggc
     3481 ggcgatctcg gcccagatcg gtccggtggc ggccgcggtc gaccgcctgg gcgtacgagc
     3541 caccctctcg ttcccgcccg gcgggggcaa cgtggggcca gtgcagctcg acttcatgtt
     3601 caagccgccc accggagtcg gactggcgat cgacgcgggt ccgatcagcg gcggcggatt
     3661 catttcctac gacgagccga acggccgcta cgccggcgtc ctcgcgctcg agatcttcag
     3721 cgtcaaggtg agcgcgatcg ggctcatcga cacgaaactc cccgacgggc ggacgggcta
     3781 tagcttcctc atcatcattt cggtcgagtt cttccccatc cagctcgggt ttggcttcac
     3841 cctcattggg gtcggcggca tctgcggcat tcatcgtacg atcaacgccg aggcgctgcg
     3901 gctgggcgtt tacgccggca gcctcgactc gatcatgttt ccccgggatc cggttcggaa
     3961 cgcgccccag atcatcagcg acctgagccg gatcttcccg ccggaggaag ggcagttcgt
     4021 cttcggcccg atggccaaga tcgggtgggg gacgccgacc ctggtcgaga tctcgctcgg
     4081 gatcatcatc gagctgccgg atccgatccg gatcgccctg ctgggtcaga tcgccgcctt
     4141 cttccccgag cggcgcgccg cgatcgtgga gatccacatc gacttcgtgg ccatgatcga
     4201 cttcggcgcg aagctcctct cgctcgatgc gactctgcgc gattcccgga ttgtcctctt
     4261 caccctcacc ggcgacatgg ccttccggct ctgctggggg gatcagccga acttcgccat
     4321 cgccctgggc gggttccacc ctcacttcca gccgcccccc ggattccccg cgctgcggcg
     4381 cctcacgctc ggcctgggcg ccggcgactg gatccggatc agctgttcga cttaccaggc
     4441 gctcaccagc aactcgcttc agtttggcgc ccgggcggag ctgtacatca gcgtcggcgt
     4501 gtttgtccgc ggctggatcg gcttcgatgc gctgatcatc ttctcgccct tctcgttcga
     4561 ggtgaccttt accgccggac tcgagatcgg cgtcggtgat ctgcagctcg ccggagtgag
     4621 cgttgagggt acgctctccg ggcccacccc gtggcgggtg cggggcgagg cgacgatctc
     4681 cctcttcttc ttcgatctct cggtggacgt cgacgtgaag ttcgggagcg aagagaaagc
     4741 ggttctggca ccggctgatc catggccgcc gctgcgcgat gcgctgaagg agccacgcaa
     4801 ctgggccgcg cttccggctg ccggcagtct tcccatcgtc acgctttcat tgccgccggg
     4861 agtcaccgcg accgtgatcg acccggcggg gaagatgacc tggaaggaga cggtggcgcc
     4921 gctcgaccgc acgctcagcc ggttcggcaa cagcggcacg cccgctccgg tcaagttcac
     4981 cgttgaccgg gtgaccgtcg gaacctctcc cgccgcattc accacggtga gagacttctt
     5041 cgcatcagcc caattcgagg agctgactga cgcggagaag ctctcccgcc cgtcgttcga
     5101 gccgatgcag gccggggtcg aggtggccag cgcggccgtc aaggcggggc cgtcgatctc
     5161 ggcgccgctt acctacgaga ccgactatga cgatcccgag cacggcccct cgctccgggc
     5221 gctgtttgtg gtcccgctct ggatgcagca ggggctgctc ctgaacagcg ggggccggca
     5281 gagcggtctc gtccaggccg ggacgcgggc cttcgcggcg ccgaccaaac tggcgcaggc
     5341 cgaggagcag ttcgtgatcg tctcgaccga cgacctcgcg gtgaaggccg agatctcggc
     5401 gccgaccacc aagggcgccg cgcaccaggc gctcaaggcg tacgtcgcaa cccggccggc
     5461 ggaacgagat gcgctgcaag tggtgcccgt tcacgaactg gaggacgtgt gacgctcacg
     5521 gttggccagt tcgcctatct cccctggctc aagaccggtg tgggcgcgga aatcgcccga
     5581 gtcgacggga cgcccggctc ggagccgaga gtctcgctgc cgattcaggt ccgattcaac
     5641 agcgatcccg ccctggcgga cggcgtgacg gtggaactct tcggccccgg cgaagtgacc
     5701 gggttcgatg tccgcaccgt ggtccgcacc tggcccaagg ctggggtgat ggacgcggag
     5761 tgcaactact tcccgatcat cgaattcgac caggcagatc tcccctggcg gtacacgccg
     5821 gcgcgcgcga cggccggcga ccggctgacc ccgtggctca cgctcatcgt gctggaggat
     5881 tccgaaatca agcgatcagt gccgccgagc agcgacggac acctgggcac ggtagagatc
     5941 aaggacgcga aagcgttgcc gaagagcaaa cagctctggg cctgggccca tgtgcaggtg
     6001 agcggcgaga ccacggtcga tgaggcccgg gccgcggccc tcatgtccgc ccgttcaccg
     6061 gccatccggt cccggctggt cgccccccgg cggatggagc cgcatcgggg ctacacggcg
     6121 ctcctcgttc ccgcgttcaa acggggtgtc atggccggac tcggccagga tccggggagc
     6181 accgatgcgc tggcactcgc ctggagcgac acccccggtg ggccgttgac cctccccgtt
     6241 ttctatcaat ggcgtttcgg caccggaccg ctgggcgact ttgaatcgtt ggcccgcctc
     6301 atcgagccgt tcgaagcgcc cgagtcggtc ggcatccggg acatggacgt ctcggccccc
     6361 tcgcccggct ttcccgcggc gaacaccagc ccgctcggac tcaggggcat gctcaccgcg
     6421 ctcaacaccc ccgataccgt ctggaatagc ggggcccgcc agggctggat agcaaggctg
     6481 aaagcgctgc tgaatctccc ggccgagcgg gcggtgaacc ccaatacgcc acgcaccgtg
     6541 acgccgccgc tctacggcca gtggcccgcg gccaccgacc gctgcgacgc tgacattcag
     6601 ccggggcggc cgctctggtt tcaggaactg tcggtcgatc cgcgccttcg caccggtgcc
     6661 gggctcggga cccgggtggt ccagacccac caggagtccc tcatggcaag cgcgtgggac
     6721 caggtggagc gggtgcgaca gctgaacgag gagctgcggc aggcacaact cgcccgggaa
     6781 ctggccctga agctcgccag tcgtcacgtc tt
//
LOCUS       DASWKS010000156         2740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1936693, whole genome shotgun sequence.
ACCESSION   DASWKS010000156 DASWKS010000000
VERSION     DASWKS010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936693"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VGA78_04625"
     CDS             complement(<1..491)
                     /locus_tag="VGA78_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9893181.1"
                     /translation="MAQPARQAEVMTPIRRAVAEVGRRVVGQETMVERLMVGLLTGGH
                     VLLEGVPGLAKTLAVRTLAEIIHATFSRIQFTPDLLPADVIGTMVFDVKTQEFRIRKG
                     PIFANIILADEINRAPAKVQSALLEAMQERQVTIGGTSYVLEEPFLVLATQNPIESEG
                     TYP"
     gene            complement(495..1229)
                     /locus_tag="VGA78_04630"
     CDS             complement(495..1229)
                     /locus_tag="VGA78_04630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX9893182.1"
                     /translation="MTLMRLQRALARAGVASRRAAEELIKGGKVRVDGKVAELGSSVD
                     PTRQKITVGGKAVRLQPRRWLAFHKPLGVVTTASDEAGRRTVFDLIANPAGLTYVGRL
                     DVATTGLLLLTTDGEAVFRLTHPKYRIPRRYTALVHGRPMAELEQLVRKRWAVDGRPV
                     VATAVRVRPGREGRSILDVTLAEGRNHVVRKWCEAMGLKVERLARLSYGPVRLGELPP
                     GKSRPLTPDEERAVYRAIGLGPDGEE"
     gene            complement(1226..1810)
                     /gene="scpB"
                     /locus_tag="VGA78_04635"
     CDS             complement(1226..1810)
                     /gene="scpB"
                     /locus_tag="VGA78_04635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX9893183.1"
                     /translation="MNPLTQLIEAALFSAARPLTLEELSALDPDVSPAEIKAGLEQLR
                     EHYDFDGHGVEVVEMGGGYQVLTRPSLAAALERAQIAQRSPRLTAAMLETLAVIAYRQ
                     PVGRNEIEEIRGVNASGVLRSLQERGLIEVTGRSEGMGRPLLYGTTPMFLELLGMPDL
                     ANLPRADEFSIALLPPRAEVPLDDDTAAYVEAES"
     gene            complement(1785..2531)
                     /locus_tag="VGA78_04640"
     CDS             complement(1785..2531)
                     /locus_tag="VGA78_04640"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX9893184.1"
                     /translation="MTLPEAPSLGIAGDSAFVVELESFTGPLDLLLHLLREEQLDISD
                     IPIARIADQFLAIIHELGLNQAADYLEMASRLLRIKAQLLLPRSVEDDGWEDPRAELV
                     RRLLEYQSIKEIALWMGRAADHQALHFSRGFLPPPPELPPPPLTLDIMELLSATERVI
                     RGILHPVLHRVVARPLDVESATLRLQALLADRDEISWWEALGPRPSLVDVLSTLLALL
                     ELARRGQLSLRQPEPFTPLVIRRESAYPAY"
BASE COUNT          448 a          927 c          910 g          455 t
ORIGIN      
        1 aatggatacg tgccttcact ctcgatcggg ttctgggtgg cgagcaccag aaacggctct
       61 tccagaacgt agctggtccc accgatcgtc acctgccgtt cctgcatcgc ctccagcaac
      121 gcggactgca ccttggccgg cgcgcggttg atctcgtcgg ccagaatgat gttggcgaag
      181 atgggacctt ttcggatcct gaactcctgg gtcttcacat cgaagaccat ggtgccgatc
      241 acgtcggccg gcagcagatc gggagtgaac tggatccgcg agaacgtggc gtggatgatc
      301 tcggccagag tccggaccgc gagggtcttg gcgagtcccg gcaccccttc cagcagcacg
      361 tggcctccgg tgagcagccc caccatcagc cgctccacca tggtctcctg gcccaccacc
      421 cggcggccta cttcggccac cgcgcggcgg atgggggtca tgacttcggc ctgtcgtgcc
      481 ggttgcgcca ttgcttactc ctcgccgtcg ggcccgagcc cgatcgcgcg gtagaccgcc
      541 cgttcttcgt cgggcgtgag gggccgggac ttcccgggcg gcagctcgcc cagccggacc
      601 gggccgtacg agagtcgggc cagccgctcg accttgagtc ccatggcctc gcaccattta
      661 cgcaccacgt gattgcgccc ctcagcgagg gtgacgtcga gaatgctccg cccttcacgt
      721 ccggggcgaa cccgtaccgc cgtcgcgacc accggccggc cgtcgaccgc ccaccgcttg
      781 cggaccagct gctccagttc cgccataggg cggccatgca ccaacgcggt ataccggcgg
      841 gggatacggt acttggggtg ggtgagccgg aagacggctt cgccatccgt ggtgagcagt
      901 agcagcccgg tggtcgcgac gtccaatcgc cctacgtagg tcagaccggc ggggttcgca
      961 atgaggtcga acacggtgcg tcggccggct tcgtccgacg ccgtcgtcac cacaccgagc
     1021 ggtttgtgaa acgcgagcca ccggcgcggc tgcagccgga cggctttgcc cccgacggtg
     1081 atcttctgcc gggtgggatc caccgaggac ccgagctcgg cgactttccc gtccacccgg
     1141 accttgccgc ctttgatcag ctcttccgcc gcccgccggg acgcgacccc agcccgtgcc
     1201 agggcccgct ggagtcgcat caaggtcatg attcggcttc gacgtatgcc gccgtgtcat
     1261 cgtccaacgg gacttcggcc cggggcggca gcagggcgat gctgaattca tcggcccgcg
     1321 gcaggttggc caggtcgggc atgccgagca attccaggaa catcggcgta gtgccgtaga
     1381 gcagcgggcg ccccatgcct tcgctccggc cggtcacttc gatgaggccg cgctcctgta
     1441 acgagcgcag caccccgctc gcgttcacgc cccggatctc ctcgatctcg ttgcggccca
     1501 ccggctggcg gtaggcgatg accgccagcg tctcgagcat ggccgcggtc agccgggggg
     1561 agcgctgcgc gatctgggcc cgctccaggg cggcggccag ggacggccgg gtgagtacct
     1621 ggtacccacc gcccatctcc accacttcga ccccgtggcc gtcgaaatcg tagtgctcgc
     1681 gcagttgctc cagcccggcc ttgatctcgg ccggggacac gtcgggatcc agcgcgctca
     1741 gctcttcgag agtcagcgga cgagcggcgg agaacagggc ggcttcaata agctgggtaa
     1801 gcggattcac ggcggatcac cagcggagtg aagggttcgg gttggcggag actcagctga
     1861 cctctacgcg ccagctccag cagcgccagc agggttgaga gcacgtcgac cagggacgga
     1921 cgcggcccca gcgcttccca ccagctgatc tcgtctcggt cggcgagcag tgcttggagc
     1981 cggagtgtgg ccgactcgac atcgagcggc cgcgccacga cccggtgcaa cacgggatgc
     2041 aggatgcccc gaatcacccg ctcggtcgca ctcagcagtt ccatgatgtc gagcgtcaac
     2101 ggcgggggcg gcagttccgg aggcggcggc aggaatccgc gcgagaagtg cagcgcctgg
     2161 tggtcggcgg cgcgccccat ccacaacgcg atttccttga tggactggta ctccagcaga
     2221 cgacgcacca gctcggcgcg gggatcctcc cacccatcgt cctcgaccga ccgggggagc
     2281 agcagttgcg ctttgatgcg gagcagccgg ctggccatct ccaggtagtc ggccgcctgg
     2341 ttgagcccca actcgtgaat gatggcgagg aactgatcgg cgatgcgcgc gatgggaatg
     2401 tcggaaatgt cgagctgctc ttcccggagc aggtgcagca gcaggtcgag cggtcccgtg
     2461 aacgactcca gctcgacgac aaacgcgctg tcaccggcga tgccgagcga cggggcctcg
     2521 ggaagagtca tctattcggg gtcctccatc tggcccagtg ggagtcagcg ggagcaatta
     2581 agggcaccgc agcggcaaaa tcaatggcac acttgcactt gggcgtttgg gtccttattt
     2641 ttttcggctc cgtcgggagt agcattcccg gccatcagtc accgacgatc gaggtcgccg
     2701 tgccccgtac ccgtgccgcc aagaagcatc agcgccagac
//
LOCUS       DASWKS010000157         4260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_71331, whole genome shotgun sequence.
ACCESSION   DASWKS010000157 DASWKS010000000
VERSION     DASWKS010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71331"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..442
                     /locus_tag="VGA78_04645"
     CDS             113..442
                     /locus_tag="VGA78_04645"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893185.1"
                     /translation="MVVAELDVRQGTLDLLVLKTLSWGPMHGYTIMSRLRHATDSELR
                     LEDAALYPALHRLEARDLIESEWGLSDNNRRAKFYRLTAAGRRALQTETAQWNRYVSL
                     VAKVLRA"
     gene            439..3102
                     /locus_tag="VGA78_04650"
     CDS             439..3102
                     /locus_tag="VGA78_04650"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893186.1"
                     /translation="MKREPLWRRYLRFFGPDVRADVDEEIQLHFELRVQDYVRDGRSP
                     DAARARVQAEFGDINRARQECRSIGEGRLREHRRARLLDGLKRDLGFGVRRALRSPGF
                     SLTAILTLALGLGATAAIFSVVHGVLLRPLPFPDPDRLVRLYEIAPTGDVQNPVSSGN
                     YLDWRQRSTGFEVLGAHYWPYEVSLTGAGDPARVVLNDLTPEALRALNPRPLLGRLFT
                     ADDGLDPSARFVLVSYGFWRDRLGGDSSAIGQTVTVDEIAYEILGVMRPDFDFPSSLV
                     DLWRPVSEAGLNPDNRRSHNLGVIARLKPGTTVEPAQAEMTTIAKALQTEYPEFMKGW
                     GVNVVKIHSDLVAPVRPLLLVLLSGVGLVLVIACSNVANLLLARAVGREREISVRGAL
                     GASRLRLVRQLLVEGAILAVAAGLLGVFLAQAMLAGLIRLAPSDIPLLDEVRLDRTVL
                     GFALLLTAASTLVFALAPALRLAGTDLQAALRADRSGALAHARLRGALVVFEVALSMV
                     LLVGAGLLVRSFTRLQAVDLGFAPDGMLAVSLSPSAARYPDAAAQTGFYQRLLERLDA
                     VPGVAGATSTSATPADPYSTTFSFAIQGRESPNPSGRFDPVPMEAVMPGYFSRLGIPL
                     RRGRTFDSRDRADAPPVAVINETLARVLWPGTDPIGQRIAFRTDAPWLEIVGVVGDTR
                     MLGADRPPAPILYLPFSQKTWAWLRWQTVLIRADAGLNPVDLLPAIRAAAAEVDPQLV
                     LPRVSTVNQLYAESAARRRFATLLLGGFAAAALALGLIGVYGVLSTAVAQRSQELAIR
                     VALGAGRSRVIALILRQALSLTLAGVAIGLLAAAGATRLLGSLLFGVSPLDPVTFGAV
                     GAILLLVSAGAALIPAWRAARVDPIGAMRGG"
     gene            complement(3112..3489)
                     /locus_tag="VGA78_04655"
     CDS             complement(3112..3489)
                     /locus_tag="VGA78_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HEX9893187.1"
                     /translation="MKLGRISACLAFGLLACGDSVSPSGDLEGTWDLIGYSDAGTAAV
                     TTGTATFRGDGTFTVSGTLTFPDEPTEPVFLSGEWALQGGVLVLTVNGQQSLWNVSLN
                     GDEATLTLQGTTPPTTITIRRSD"
     gene            complement(3629..3793)
                     /locus_tag="VGA78_04660"
     CDS             complement(3629..3793)
                     /locus_tag="VGA78_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893188.1"
                     /translation="MRRGTPESGAGVHPLLDEARRLGQSTAALTYEYAKQRKAADERF
                     AVEQAQSTRS"
     gene            complement(3990..>4260)
                     /locus_tag="VGA78_04665"
     CDS             complement(3990..>4260)
                     /locus_tag="VGA78_04665"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9893189.1"
                     /translation="RIALGATRGDILRLVVGHAMSITAVGLGLGVGIALASGRVIARL
                     LYDVDPSDPVVLAAVTAFLAAVALIASALPALRATRIAPTVAIRD"
BASE COUNT          584 a         1424 c         1491 g          761 t
ORIGIN      
        1 cctcgcgcgg gaaccgtgag gagggcgctc gggcgggcct ccccttcggc ttgacagggt
       61 cgccggcgcg gcccaagttc cactaaacgg tttagtggaa gacgagcgaa ccatggttgt
      121 agccgagctg gacgtcaggc agggaaccct ggatctgctg gtgctcaaga ccctgtcctg
      181 gggtccgatg cacggctaca ccatcatgag ccggctgcgc cacgccaccg acagcgagct
      241 gcggctggag gatgcggcgc tctatcccgc gctgcatcgg ctcgaggcac gcgacctcat
      301 cgaatccgag tggggtcttt ccgacaacaa tcggcgagcc aagttctacc gcctcacggc
      361 agcgggccgg cgagcgctcc agacggaaac ggcgcagtgg aaccggtatg tgtcgctggt
      421 ggccaaggtg ttgcgggcat gaaacgagag cctctctggc ggcgttacct gcggttcttc
      481 ggacccgacg tgcgggccga tgtggacgag gaaatccagc tgcacttcga gttgcgggtc
      541 caggattatg tccgcgacgg ccgctcgcct gacgccgccc gggcccgggt gcaggcggag
      601 tttggcgaca tcaaccgggc ccggcaggaa tgccggtcca tcggggaggg gagattgcgc
      661 gaacatcgac gggcccgatt gctggatggt ctcaagcgcg acctcgggtt cggggtgcgg
      721 cgggccctgc gcagtcccgg gttcagtctc accgccattc ttacgctggc gctggggctc
      781 ggcgccacgg ccgcgatctt cagtgtcgtg catggcgtgc tgctccggcc gcttccgttt
      841 cccgaccccg accggctggt ccggctctac gagatcgcgc ccaccggcga cgtccagaac
      901 ccggtctctt cggggaacta cctcgattgg cgacagcgtt cgaccggttt cgaggtactg
      961 ggggcccact actggcccta tgaggtgtcg ctcacggggg ccggcgaccc ggcccgcgtg
     1021 gtgctgaatg atctcacccc cgaggcgctt cgggcgctga atccccggcc gctgctgggc
     1081 cggctcttca ctgccgacga tgggctcgac ccgagcgccc gattcgttct ggtcagttac
     1141 ggcttctggc gggatcgact tggcggggat tcgtcggcga tcggtcagac agtcaccgtg
     1201 gatgagatcg cgtatgaaat cctgggcgtc atgcggcccg atttcgattt tccgtcgtcg
     1261 ttggtggatc tctggcggcc ggtgagtgaa gccgggctga accccgacaa ccggcgcagc
     1321 cacaacctgg gcgtgattgc ccggctcaag ccgggcacaa cggtcgaacc ggcccaggcc
     1381 gaaatgacta cgatcgcgaa ggcgttgcaa accgagtatc ccgagttcat gaagggatgg
     1441 ggtgtcaacg tcgtcaagat ccattcggat ctggtcgcgc cggtgcgacc gctcctgctg
     1501 gtgctcttga gcggagtggg cctggtgctg gtcatcgcct gcagcaacgt tgccaacctg
     1561 ctgctggcgc gggcggtggg gcgggagcgg gagatatcgg tccggggcgc gctgggtgcc
     1621 agccggctgc ggttggtgcg gcagctgctg gtcgagggcg cgatcctcgc cgtcgccgca
     1681 ggactcctcg gtgtcttcct ggcgcaggcc atgctggccg ggctcatccg gttggcgccc
     1741 tccgacatcc ccttgctgga cgaggtccgg ctcgatcgca cggtgctggg gtttgccttg
     1801 ctgttgaccg cggcgagcac cctggtgttt gccctcgcgc ccgccctgcg attggcggga
     1861 accgatctgc aggccgccct cagggccgat cgctccggtg ccctggccca tgctcggctg
     1921 cggggtgcgc tggtggtgtt cgaggtggcc ctgtcgatgg tgcttctggt tggggccgga
     1981 ctgctggtgc gctccttcac ccgattgcag gccgtcgatc tgggattcgc tccggacggg
     2041 atgctggcgg taagcttgag cccctcggcg gcacgctacc ccgatgccgc ggcccaaacc
     2101 ggattctacc agcgcctgct ggaacgactg gacgcggtac cgggcgtagc gggtgcgacc
     2161 tcgacctcgg cgactccggc cgatccgtac tcgaccacct tcagcttcgc gattcagggg
     2221 cgggaatccc ccaatcccag cggacggttc gacccggtgc cgatggaagc ggtcatgccc
     2281 ggctatttca gccgcctggg cattcctctc cgccggggcc gtaccttcga ctcgcgcgac
     2341 cgggccgatg cccccccggt ggcggtcatc aacgagaccc tggcccgggt gctctggccg
     2401 gggaccgacc ctatcggaca acggattgcg tttcgcaccg atgccccctg gttggagatt
     2461 gtgggcgtgg tgggtgacac ccggatgctg ggtgctgacc ggccgccggc gccgattctc
     2521 tacctcccgt tctcccagaa gacctgggcc tggctccgct ggcagaccgt gctgattcgg
     2581 gccgacgccg gattgaatcc ggtcgacctg cttcccgcca ttcgggccgc cgcggcagag
     2641 gtcgacccgc agctggtgct gccccgggtg tcgaccgtga atcagctcta cgccgagagc
     2701 gccgcgcggc ggcgtttcgc cacgctgttg ttaggcgggt tcgcggcggc ggcgctcgcc
     2761 ctggggctga tcggggtgta cggcgtgctc tcgaccgcgg tggcgcaacg aagccaggag
     2821 ctggccatcc gggtggcgct gggggccggc cggtcgcggg tgatcgccct catcctgcgg
     2881 caggcgctga gcctgactct ggccggagtg gcgatcggac tcttggcggc cgcgggggcc
     2941 acccggctgc tgggctcgct gttgttcggt gtgtcaccgc tggatcccgt caccttcggc
     3001 gccgttgggg ccatcctgct gctggtctcg gccggggccg cgttgatccc cgcctggcgg
     3061 gcggcccggg tcgatccgat cggggcgatg cggggcgggt gatcggtggg gtcagtcgct
     3121 ccggcggatg gtgatggtgg tgggcggggt ggtcccttgc agcgtcaggg tcgcctcgtc
     3181 gccgttcagg ctcacgttcc agagcgactg ctgcccattc acggtcagga ccagcacgcc
     3241 gccctgcagc gcccattcac cgctcagaaa gaccggttcg gtgggctcgt ccgggaaggt
     3301 caatgtcccg ctgacggtga aggtcccgtc tccccggaag gtggcggtgc cggtggtgac
     3361 cgccgcggtg ccggcgtcgc tgtagccgat caggtcccaa gtgccctcca gatctcccga
     3421 gggcgacacc gaatcgccgc aggccaacag gccgaacgcc agacaggcgc tgatccgtcc
     3481 cagtttcatg gttgcctcgc cttcaatatg gacgttccgc gccctgggtg gtgacacgct
     3541 gtcatcccga gcgcggcgac gtccagatgc agatggtcat cctctcacct gacgcattat
     3601 tagatcgaga gggttcgggc cctggccctc aactcctggt tgattgggcc tgctcgacgg
     3661 cgaaccgctc gtcggcggcc ttccgctgct tggcgtattc gtaggtgagc gcggccgtcg
     3721 actgccccag acggcgggcc tcgtccagga gcgggtgaac tcccgctcca gattccggag
     3781 ttccgcgcct caatctcttc ccgccgctgt gcgccgccgc ctaacaggcc actcgcaagc
     3841 cccagcacac caccaggacg gtcccacccc ggtgccgtcg gccgttaggc ccctgtcgaa
     3901 tgaaggagcc cttaaggcat agtccttccg tgccggtcgc ttccgggatc cccttcccgc
     3961 aaaactacct ggcgcgtgag gctgcctggc tagtcccgga tcgcgactgt tggcgcgatg
     4021 cgggtcgccc ggagggcggg cagggccgag gcgatcagcg cgaccgcggc gaggaacgcc
     4081 gtgaccgcgg cgagcacgac cgggtcgctc gggtcgacat catacaacag cctcgcgatc
     4141 acccgtcccg acgcgagcgc gatcccgact ccgagcccga gcccgacagc cgtgatggac
     4201 atcgcgtgcc ccacgaccag acggaggata tcgccgcggg tcgcgcccag cgcgatccgc
//
LOCUS       DASWKS010000158         9484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3389787, whole genome shotgun sequence.
ACCESSION   DASWKS010000158 DASWKS010000000
VERSION     DASWKS010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9484
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3389787"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..484)
                     /locus_tag="VGA78_04670"
     CDS             complement(<1..484)
                     /locus_tag="VGA78_04670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9893190.1"
                     /translation="MSTVLIAGGGSGGHLMPALAIATELRARGRRVVLVGATRGIESR
                     LLPHRGFRYHLLQSEPIYRRQWWKNLRWPLLAIRLLRQIDRVFKEETPGLVVGTGGYA
                     AGPVVWRAARRRIPTAILEQDAFPGLATRLLAREAKHVYLGQPETRARLTIGLDTQVF
                     V"
     gene            complement(481..1608)
                     /locus_tag="VGA78_04675"
     CDS             complement(481..1608)
                     /locus_tag="VGA78_04675"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEX9893191.1"
                     /translation="MSGPAIRHPGEHRWEVRLLAVVAATLTVFGIANLYGAASMRENG
                     FMMMMKQLIIGLIGGIGMLLVSRLDYRKLRPLAWPALGGALVLLLIPILPEGLTSGLS
                     PTLNGARRWVYLPGFGFQPSEVAKFVLVVWAAALAAKKGSQIRQFKKGVLPFLVIIGL
                     VCAMIMQQPNLSTATLVALLGAVVLFTAGAKIGHFILLAGAAGLVVFQLVLVSDYRRA
                     RLETFFGRGTEDSGMQITQSMIAVGSGGIVGTGFGQGKAKLAHVPYANSDFLFSSIGE
                     EWGFIGVTVVALLFGVFGWLGYRIARSAPDAFGQYLATGLVTAVALTAVLHMAVTLKL
                     MPTTGLTLPFMSHGGSSLLMNLLATGVLVSIGRLRGRPSAT"
     gene            complement(1605..2954)
                     /gene="murD"
                     /locus_tag="VGA78_04680"
     CDS             complement(1605..2954)
                     /gene="murD"
                     /locus_tag="VGA78_04680"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEX9893192.1"
                     /translation="MIHRWRADGREVAVIGLGRSGQAATRLLRARSVPVYASDAGSGA
                     GLDTVALELSDLGAAVDTGMHDLERIRRAVGVVLSPGVPPDAAPVFAARDAGIVVRAE
                     IDLGLEAVEGTPYIATTGTNGKSTVTGLVGHLLQSAGRRAEAVGNIGTPLSTIALEES
                     RPDWLSIEFSSFQLHDCPLINPVVGVLTNLSPDHLDRYASLAAYYADKRLLFANAHPE
                     SVWVTNADDPESERQAAGVPGQRFRFSVRERAAGWFDRPAGRLMLDGKPLLARRELPL
                     LGDHNVANALAAALAVAATGVPPERIAEGLRTFSALKHRLEPVREVQGVLWINDSKAT
                     NISSTEVAVVALDRPFVLLLGGRHKGEPYTRLLPLLQDRCRAVVAYGEARPIVLGDLA
                     PQVRVEEAGGFDDVLERAARLAQPGDAVLLSPACSSYDMFLNYEQRGATFRAWVEAR"
     gene            complement(2954..4081)
                     /gene="mraY"
                     /locus_tag="VGA78_04685"
     CDS             complement(2954..4081)
                     /gene="mraY"
                     /locus_tag="VGA78_04685"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEX9893193.1"
                     /translation="MLYHLLAPLGKSYLFFNLFNYISFRAAGAVVTALLLAFVVGPSI
                     IRKLRALKVGQVVRADFLASHQGKRGTPTMGGLIILLATIVPTLLWAPLTNRFVVVAM
                     LAMLWTGMIGFLDDYLKVVQGRSRGLVAKWKLAGQVVFGLALGLYLIYFPAVSPATMP
                     ATATTVPFFKFVVVNFAPWLYVVFVTFVVAGTSNGVNLADGLDGLATGLTAIAAAAFG
                     IFAYVFGRVDATTYLNLFYLPDAGELAVFLGALMGGSLGFLWFNAHPAQVFMGDTGSL
                     GIGGALGTVAILLKAEFLLAVIGGVFVAESLSSMIQTSVFKWYKRTRGREYAEVHRVF
                     RMAPIHHHFEKLGWAETTVVMRFYILGILCALLALATLKLR"
     gene            complement(4081..5445)
                     /gene="murF"
                     /locus_tag="VGA78_04690"
     CDS             complement(4081..5445)
                     /gene="murF"
                     /locus_tag="VGA78_04690"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEX9893194.1"
                     /translation="MTLVLSERAVRDALGLPGGSDAVRYSAVSTDTRTIAPGAIFVAL
                     RGERFDAHHFLEAARDAGAVAAVVHQGTAPVGGLVLHHVADTLRGYGLLARARRRSIT
                     GPVVAITGTNGKTSTKELVAAVLRTKWFTHATRANLNNLVGVPQTILEAAPATQALVV
                     EAGANLPGEIARYREIIEPDLTIVTNATAGHLEGFGSFEAVVAEKLELVRNVPIALVG
                     TEPRSLGEGSREQGAGRVITVGLSKADVVPEAVTLGPDARPTVTIDGYTFTVPLLGLH
                     QAGNALFAWAAARELHLDLPACAAALAGVRLPFGRGEVIKLGGLTIVNDAYNANPVSF
                     RTAIAIARQLRPGRRLVFVAGTMRELGPDSERLHRDIAEQLAALDPDLLAAVGDFVPA
                     LAPWAGHFGHRLVTATDAIALGPLLAERLSGDELVVLKASRGVALERILPAIAGRVVS
                     SPEA"
     gene            complement(5442..6896)
                     /locus_tag="VGA78_04695"
     CDS             complement(5442..6896)
                     /locus_tag="VGA78_04695"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEX9893195.1"
                     /translation="MPEESKMEAVIEALSRAGLLAARPPVGPPVRQITSDSRSVEPGA
                     LFLALPGTQVHGNRFVGDAISRGAAVVLLEQPVEDPVPQIVVRDAKRAAMVVARAWYG
                     DPTRGMLLVGVTGTNGKTTTTAVLRHLLNAAGDTGSIGTLGAFDGRGGDVPSSAGSLT
                     TPGPVDLQATFAAMKARGVSRIAMETSSHSLDQGRLDGLSFGAGVFTNLTRDHLDYHG
                     SMEHYFAAKLRLLDLLAPGAPRVVNHDDPSWESIPAGAERLSFGMNPGADVRAEHLVL
                     AASGSGFHLTGRFGKRPVQLPLPGDFNVANSLAAATCALALGATLDQVVERLITAPQV
                     PGRMERLTLQPCVVLRDYAHTPDALERVLQTLRPLTRGRLVVLFGCGGDRDRGKRPLM
                     GAIADTLADLAIVTSDNPRTEDPERIIDDIVAGMRGSYLRMADRREAIATALGRVAAG
                     DTLLLAGKGHETYQVIGTVKHPFDERSIVAELAA"
     gene            complement(6990..8957)
                     /locus_tag="VGA78_04700"
     CDS             complement(6990..8957)
                     /locus_tag="VGA78_04700"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEX9893196.1"
                     /translation="MANSTTRIGFIQFLFFAGLTVVLGRAAQLQVLEGAKWARVADST
                     RTSTRELQPRRGTIYDRNGSPLAVSQDYYRVGVATWEIPQKQRSRAAALLVRELNFDP
                     KEVRTKFRRAKQPRDYLYRFEPASASAVEELRDLRGVHLEPAYLRAYPSGGTARDLIG
                     AVLPDSARGQTGIERSLDSLLRGVSGRATFLRDRAGREYLSPDRVLRLPVPGHDVLLT
                     LDAELQGIAEAGLAETLHDQDASAGDVVLLEPHTGEILALATRVRRPDGARKAGAWIP
                     AEPGSTIKPFAAAGLLQLGRARPTDSVYGEQGEWRLEKRSRPIRDTHPLKGWVTLAKA
                     IEVSSNVATTKFTLRLKPEEHYDVLRDFGFGSPTALELPYESPGLLKRPHAWQEDNTQ
                     PSMAQGYEVEVTPLQLAAAYAALANEGMLPSLSLIREVRDRDGKTLFRNEPRPVRRVV
                     SAEVAKQVRGFLRLATGTQGTGSRAQLDRYQVIGKTGTARNVVNGRYTGTYTASFAGL
                     FPADQPQLVVVVRIVDPRAGDYYGGLVAAPLTRRMLQDALAARRSALDRTRFAERAPA
                     VDAGQPEADDEPVAAAPVQVSYPLVTRPASPKKQVVVPDLQGISVRQAALTLHRRGLR
                     VRLEGTGLVERTSPAAGDSVRQGSIVVVKTH"
     gene            complement(8962..9258)
                     /locus_tag="VGA78_04705"
     CDS             complement(8962..9258)
                     /locus_tag="VGA78_04705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893197.1"
                     /translation="MKVRGRTWLGLWLVVFLAVAVAVVARQRAALEVAAHLNELRERR
                     QALEAERAEYERRIHQGSSRSVLVPRVEARLKLRLPSDSEYVTLQLPAAGAANR"
     gene            complement(9255..>9484)
                     /gene="mraW"
                     /locus_tag="VGA78_04710"
     CDS             complement(9255..>9484)
                     /gene="mraW"
                     /locus_tag="VGA78_04710"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HEX9893198.1"
                     /translation="LLVISYHSGEDRRVKHSFQQWARSCVCPPEWPECRCRGQALGRL
                     EPRRPVRASPAEIQANPRARSAMLRGFRSVT"
BASE COUNT         1624 a         3316 c         3191 g         1353 t
ORIGIN      
        1 tgacgaacac ctgggtgtcg agaccgatcg tcagcctggc tcgggtctcg ggttgtccca
       61 gatagacgtg cttggcctcc cgggccagca ggcgagtggc cagtccggga aacgcgtcct
      121 gctcgagaat cgcggtgggg atccgtcgtc gggccgcgcg ccagaccacc ggaccggcgg
      181 cataaccgcc ggtcccgact accagcccag gagtctcctc cttgaagacc cggtcgattt
      241 gccgcagcag ccggatggcg agcagcggcc agcgcaggtt cttccaccac tgccgccggt
      301 agatcggctc ggactgcagc aggtgatagc gaaagccgcg gtgcggcagg agccgcgact
      361 cgatgccgcg ggtggcgcct accaggacta cccggcgtcc ccgggcgcgg agctcggtcg
      421 cgatggccag cgccggcatg aggtgccctc cactgccgcc gccggcgatc aggaccgtgc
      481 tcatgtcgcc gaggggcgtc cccgcaaccg gccgatgctg acgagcacgc cggtcgccag
      541 caggttcatc aggaggctgg agcctccatg cgacatgaac ggcaaggtga gcccggtggt
      601 gggcatcagc ttgagcgtca cggccatgtg cagcaccgcg gtgagcgcta ctgcagtgac
      661 caggccggtc gccagatact gcccgaaggc gtcgggggcg gatcgcgcga tccgatagcc
      721 cagccagccg aagacgccga agagcaacgc caccacggtc acgccaatga atccccactc
      781 ttccccgatg gagctgaaca ggaagtcgga attggcatac gggacgtggg ccagcttggc
      841 cttgccctgc ccgaatccgg tcccgacgat cccgccggag ccgaccgcga tcatggactg
      901 ggtaatctgc atgccgctat cctcggtccc ccggccgaag aacgtctcca gccgggcccg
      961 gcggtagtcg gacaccagca ccagctgaaa caccaccagg ccggccgcgc cggcgagcag
     1021 gatgaagtgc ccgatcttgg ccccggcggt gaacagcacc accgcgccta acagggcgac
     1081 cagggtggcg gtcgagaggt tgggttgctg catgatcatg gcgcacacca gcccgatgat
     1141 gaccaggaaa ggcaggaccc ccttcttgaa ctggcggatc tgcgatccct tcttggcggc
     1201 cagcgcggcc gcccacacca ccaggacgaa cttcgccacc tccgacggct gaaaaccgaa
     1261 accggggaga tatacccagc ggcgggcgcc gttgagcgtg ggcgagagcc cgctggtgag
     1321 cccctcgggc aggatgggaa tcaggagcag aaccagggcg ccacccagcg ccggccaggc
     1381 cagcggccgg agcttgcggt agtcgagccg ggacaccagc agcatgccga tcccgccgat
     1441 cagtccgatg atgagctgct tcatcatcat catgaagccg ttctcgcgca tgctggcggc
     1501 gccgtaaaga ttggcgatgc cgaacaccgt gagcgtggcg gccaccaccg ccagcagccg
     1561 cacttcccag cggtgctcgc ccggatggcg gatggccggc ccgctcaccg ggcctccacc
     1621 caggcgcgga aggtggcgcc gcgctgctcg tagttcagga acatgtcgta gctggagcag
     1681 gccggcgaca gcagtacggc atcccccggc tgggccagcc gagcggcccg ttccagcacg
     1741 tcgtcgaacc cgccggcctc ctcgacccgg acctgcgggg cgagatcgcc taacacgatg
     1801 ggacgggcct ccccgtacgc caccacggcc cggcaccggt cctgcagcaa cggcagcagg
     1861 cgggtatacg gctcgccctt gtggcgcccg cccagcagca gaacgaaggg acggtccagg
     1921 gccacgaccg ccacctcggt cgacgagatg ttggtggcct tggaatcgtt gatccagagg
     1981 acaccctgga cttcgcgcac cggttcgagc cggtgcttga gagcgctgaa ggtccgaagc
     2041 ccctcggcga tgcgctccgg cggaaccccg gtcgccgcca ccgccagtgc cgcggccagg
     2101 gcgttggcga cgttgtggtc gcccagcagg gggagctccc gccgggccag cagcggcttg
     2161 ccgtccagca tcaaccgccc ggcggggcga tcgaaccagc cggcggcgcg ttcccgtacc
     2221 gaaaaacgga accgctggcc cggcacgccg gccgcctggc gctctgactc ggggtcgtcg
     2281 gcgttggtga cccacaccga ctccgggtgg gcgttggcga acagcaaccg cttgtcagcg
     2341 taatacgccg cgagcgaggc gtaccggtcc agatgatcgg gcgagagatt ggtcaggacc
     2401 cctaccaccg gattgatcag gggacagtca tgcagctgaa acgacgaaaa ctcgatggag
     2461 agccagtccg ggcgcgactc ctcgagggcg atggtgctga gcggcgtgcc gatgttgccc
     2521 accgcctccg cccgccgccc cgcgctctgc agcaggtgac cgaccagccc ggtcacggtg
     2581 ctcttcccgt tggtccccgt ggtcgcgatg tagggcgtgc cttccacggc ctcgagcccc
     2641 aggtcgattt cggcccggac cacgatgccg gcgtcgcggg cggcgaacac cggtgccgcg
     2701 tccgggggga cccccggaga gagcaccaca cccacggcgc ggcggatccg ttcgagatcg
     2761 tgcatgccgg tgtccaccgc ggcgcccagg tcgctcagct ccagcgccac cgtgtcgagt
     2821 ccggccccgc tgcccgcatc ggaggcgtag accggcacgc tgcgggcccg cagcagccgg
     2881 gtggcggcct gcccgctccg gcccagccct atcaccgcca cttcgcggcc gtcggcccgc
     2941 cagcggtgga tcatcagcgc agcttcaggg tggcgagcgc cagcagggcg cagagaatgc
     3001 ccaggatgta gaagcgcatc accacggtgg tttcggccca ccccagtttc tcgaaatggt
     3061 gatggatcgg cgccatccgg aacacccggt ggacctcggc gtattcccgt ccccgggtgc
     3121 gcttgtacca cttgaacacc gaggtctgga tcatcgatga cagcgactcg gccacgaaca
     3181 ccccgccgat gaccgcgagc aggaactccg ctttgagcag aatcgccacc gtgcccagcg
     3241 cgccgccgat gcccaggctc ccggtgtccc ccatgaacac ctgagcggga tgggcattga
     3301 accagaggaa cccgagcgag ccacccatca aggcgcccag aaagaccgcc agctcacccg
     3361 cgtccggcag gtagaacagg ttgaggtagg tggtcgcgtc cacccggccg aacacatagg
     3421 cgaagatccc gaaggccgcc gccgcgatgg cggtgagacc ggtggcgagg ccgtccagac
     3481 cgtccgccag attcaccccg ttgctggtgc ccgcgaccac gaaggtgacg aacaccacgt
     3541 agagccaggg cgcgaagttg accaccacga acttgaagaa tgggaccgtt gtggccgtgg
     3601 ccggcatggt ggcgggggag accgccggga agtagatgag atacagaccc aaagccagtc
     3661 cgaaaaccac ctgcccggcc agcttccact tcgccaccag gccgcgcgac cggccttgca
     3721 ccaccttcag atagtcgtcc aggaacccga tcatcccggt ccagagcatc gcgagcatcg
     3781 cgaccaccac gaaccggttg gtgagcgggg cccacaacag cgtgggcacg atggtggcga
     3841 gcaggatgat caagccgccc atggtcggcg ttccccgctt gccctggtgg ctggccagaa
     3901 aatcggcccg caccacctgc cccactttga gtgcccgcag cttgcgaatg atggagggcc
     3961 cgacgacgaa cgcgagcagc agcgcggtga ccacggctcc cgccgcgcgg aagctgatgt
     4021 agttgaagag attgaagaag aggtagctct tgcccagcgg ggcaaggagg tgatagagca
     4081 tcaggcctcg gggctcgaca cgacacggcc ggcaatggcc ggaagtatac gttcgagcgc
     4141 taccccacgg gatgccttga ggaccaccag ctcatcgccc gagagccgtt ccgccagcag
     4201 aggaccgagc gcgatggcat cggtggccgt caccagccgg tggccgaagt ggccggccca
     4261 gggggcgagg gccgggacga agtcgcccac cgccgccagc agatcggggt cgagtgccgc
     4321 cagttgctcc gcgatgtcac ggtgcagtcg ctccgaatcc ggccccagct cccgcatggt
     4381 gccggccacg aacaccaacc gccggccggg acggagctgg cgggcgatcg cgatcgcggt
     4441 tcgaaaggac accggattcg cgttgtaggc gtcgttcacg atggtgagcc cacccagctt
     4501 gatcacttca ccccgaccga aaggcaatcg caccccggcg agcgcggcgg cgcaggcggg
     4561 cagatccaga tgcagctccc gcgccgcggc ccaggcaaag agcgcgttgc cggcctggtg
     4621 cagccccagc agcggtaccg tgaaggtgta gccgtcgatg gtcacggtgg gccgcgcatc
     4681 gggaccgagg gtcactgctt cgggcaccac atcggccttc gaaagaccga ccgtaatcac
     4741 ccgacccgct ccctgctccc ggctgccttc tcccagtgag cgcggctcgg tccccaccag
     4801 ggcgatcggg acgttgcgca ccagctccag cttctccgcc accaccgcct cgaatgaacc
     4861 gaatccctcg agatgtccgg cggtggcgtt ggtgacgatg gtcagatcgg gctcgatgat
     4921 ctcgcggtag cgcgcgatct cgcccgggag attcgccccg gcttcgacca ccagtgcctg
     4981 ggtcgccggc gccgcctcca gaatggtctg ggggactccc accaggttgt tgaggttggc
     5041 gcgggtggcg tgcgtgaacc acttggtgcg gagcacggcg gccaccagct ccttggttga
     5101 ggtctttccg ttggtgccgg tgatcgccac gaccgggccg gtgatgctgc gtcgccgggc
     5161 ccgggccagc aggccgtagc cccgaagggt atcggccacg tggtgcagta ccagaccacc
     5221 caccggagcg gtaccctggt gcaccaccgc cgccaccgcc ccggcatccc gtgccgcctc
     5281 cagaaagtgg tgggcgtcga agcgctcgcc ccggagcgcc acgaagatcg ccccgggagc
     5341 aatggtgcgg gtatcggtgg aaacggcact atagcgcacc gcatcggaac cgcccggcag
     5401 tcccagcgcg tcgcgcacag cgcgttcgct caggaccagg gtcacgccgc caactcggcc
     5461 acgatgctgc gctcgtcgaa ggggtgcttg acggtcccga tcacctggta ggtctcgtgc
     5521 cccttccccg ccagcagcag cgtatcaccg gccgcgaccc ggcccagcgc ggtggcgatg
     5581 gcttcacgcc gatcggccat ccggagatag gaaccccgca tgccggccac gatgtcgtcg
     5641 atgatccgct cgggatcctc ggtccgggga ttatccgagg tgacgatcgc cagatcggcc
     5701 agggtgtctg cgatagcgcc catgagcggg cgcttgccgc ggtcgcggtc gccgccgcag
     5761 ccgaacaaga ccaccaggcg gccccgggtc aggggtcgca gggtctgcag cacccgctcc
     5821 agcgcgtcgg gcgtatgggc gtagtctcgc agcaccacac agggctggag ggtcaggcgt
     5881 tccattcgcc ccgggacctg gggtgcggtg atcagccgct cgaccacctg gtccagggtg
     5941 gcgcccagtg ccagcgcgca ggtggcggcc gccagtgagt tcgccacgtt gaagtcgccc
     6001 ggcagcggaa gctgcaccgg tcgcttgccg aaccggccgg tgagatgaaa cccgctgccg
     6061 gacgccgcca gcaccaggtg ctcggcccgc acgtcggcgc ccggattcat cccgaagctc
     6121 agccgttcgg cgccggcggg aatggactcc caggagggat cgtcatggtt caccactcgg
     6181 ggagcacccg gcgccaggag atccaacagc cgcagcttgg cggcgaagta gtgctccatc
     6241 gacccgtgat agtcgagatg atcccgggtc aggttcgtga agacaccggc cccgaagctg
     6301 agcccgtcca gccggccctg gtccagactg tgggacgagg tctccatcgc gatccggctg
     6361 acaccgcggg ccttcatcgc ggcgaaggtg gcctggagat ccaccggtcc gggcgtggtg
     6421 agcgacccgg ccgacgacgg cacgtcgccg ccgcggccat cgaacgcacc cagcgtgccg
     6481 atgctgccgg tatcaccggc cgcgttgagc aggtgccgca gcaccgccgt ggtcgtggtc
     6541 ttgccattgg tgccggtcac ccccaccagc agcatgcccc gagtgggatc gccataccag
     6601 gcccgcgcga ccaccatcgc cgcccgcttg gcatcccgca ccacaatctg cggtaccgga
     6661 tcctccaccg gctgctccaa cagcaccacc gcagcccccc ggctgatcgc gtcgcccacg
     6721 aagcgattgc cgtgaacctg cgtgcccggc aaagccagga acagcgcacc cggttccacg
     6781 gaacggctgt cgctggtgat ctggcggacg ggcgggccga cgggcgggcg ggcggcgagc
     6841 agcccggcgc ggctcagcgc ctcgatcacg gcttccatct tggattcttc gggcatgtca
     6901 ggaaaagcga ttgatgattg acggttgccg actgacaatt gccgaggcga gaagtcggaa
     6961 agcaatcgac aatcgtcaat cgtcaatcat caatgggttt tgaccacgac aatgctcccc
     7021 tgccgcaccg agtctcccgc ggcgggcgag gtccgttcca ccaggccggt cccctccagt
     7081 cgcacccgga gcccgcgccg gtgcagcgtc agggcggcct ggcgtaccga gattccctgc
     7141 aaatccggta ctacgacttg cttcttcggg gacgcgggac gggtcaccag ggggtacgac
     7201 acctgtaccg gcgcggcggc gaccggctcg tcgtctgctt ctggctggcc ggcgtcgaca
     7261 gccggagccc gctcagcaaa ccgagtccga tccagggcac tccggcgtgc cgccagggcg
     7321 tcttgcaaca tccggcgagt cagcggagcc gccaccaggc ccccgtagta atcgcccgcc
     7381 cggggatcga caatccgcac cacgaccacc agctggggct ggtcggccgg aaacagcccc
     7441 gcgaaagagg cggtgtaggt gccggtatac cggccattga ccacgttgcg cgccgtgccg
     7501 gtcttgccga tcacctggta acggtccagc tgagcccggg aaccggtgcc ctgggttccc
     7561 gtcgccagac ggaggaagcc gcgcacctgc ttcgccacct ccgcactcac cacgcgtcgc
     7621 accgggcggg gctcattccg gaacagggtc ttcccgtccc gatcgcgcac ttcccgaatc
     7681 aggctgagcg acggcagcat gccctcattg gcgagggcgg cgtaggcggc ggcgagttgc
     7741 agcggcgtga cttccacctc gtatccctgc gccatgctgg gttgggtatt gtcctcctgc
     7801 cacgcatgag gccgcttgag caacccgggc gactcgtagg gcagttccag cgcggtgggg
     7861 ctgccgaatc cgaagtcgcg cagcacgtcg taatgctcct ccggcttgag tcgcaaggtg
     7921 aatttcgtgg tggccacgtt gctcgagacc tcgatggcct tcgccagcgt cacccacccc
     7981 ttgagcgggt gggtatcccg aatcggacga gaacgttttt ccaggcgcca ctcgccttgc
     8041 tccccataga ccgagtcggt cgggcgggcc cggcccagct ggagcagccc cgccgccgca
     8101 aacggcttga tggtcgatcc cggttcggcg ggaatccagg cgccggcttt gcgagcgcca
     8161 tcggggcggc gaacccgggt cgccagggcc aggatttcac cggtgtgtgg ctcgagcagc
     8221 accacgtcgc cggcggacgc gtcctggtcg tggagcgtct cggccagccc cgcctcggca
     8281 atgccctgca gctcggcgtc gagcgtgagg agcacgtcgt ggcccggtac cgggaggcgc
     8341 agcacccggt caggggagag gtattcccgc cccgcccggt cccgcaggaa cgtcgcccgc
     8401 cccgagacac cgcgcagcag cgaatcgagc gatcgctcga tgccggtctg gccccgcgcc
     8461 gaatcgggca ggaccgcgcc gatcagatcg cgcgccgtgc cgcccgacgg ataggcgcgc
     8521 aagtaggccg gctcgagatg gactccccgc agatcgcgca actcttccac ggcgctggca
     8581 ctggcgggct cgaatcgata gaggtaatcc cgcggctgct tggcacgccg gaacttggtc
     8641 ctgacttcct tggggtcgaa gttcagctcc cgcaccagca gggccgcggc gcgggaacgc
     8701 tgcttctggg gaatctccca ggtggccacc ccgacccggt aataatcctg cgatacggcg
     8761 aggggcgagc cgttacggtc gtaaatggtt ccccgccgcg gctgcagttc gcgggtcgag
     8821 gttcgggtac tgtccgctac ccgggcccac ttggcgcctt ccaggacctg caactgggcc
     8881 gcgcgtccca gcacgacggt gaggccggca aagaacagaa actggatgaa gccaatgcgg
     8941 gtggtcgagt tggccatggg gtcagcggtt ggcggcgccc gccgcgggaa gctggagggt
     9001 cacatactcg ctgtcgctcg gcagacgcag cttgaggcgg gcctcgaccc ggggtaccag
     9061 gaccgaccgg ctggatccct ggtgaatccg cctctcgtat tccgcccgct cggcttcgag
     9121 ggcctggcgt cgctcccgca actcattcaa atgggccgcg acctcgagcg cggcgcgctg
     9181 acgagccacc actgctaccg ccacggccag aaacaccacc agccaaagcc cgagccaggt
     9241 gcgaccgcga accttcatgt gacgctgcga aagccgcgca gcatagcgct ccgggcccgg
     9301 gggttggctt ggatttcagc gggactggcc cgcaccggtc ggcgaggctc gagccggccc
     9361 agcgcttggc cccggcagcg gcactccggc cactcggggg gacagacgca cgaccgggcc
     9421 cattgttgaa aggaatgctt cacccgccga tcctcgcccg aatgataact gatcaccaac
     9481 agaa
//
LOCUS       DASWKS010000159         7041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_445676, whole genome shotgun sequence.
ACCESSION   DASWKS010000159 DASWKS010000000
VERSION     DASWKS010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445676"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VGA78_04715"
     CDS             complement(<1..353)
                     /locus_tag="VGA78_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893199.1"
                     /translation="MLRARRRTVLRRDTILFAACVGLSITALALPAPMTGALTSSIRD
                     TALLPLIWLQQRAEEGRTSRARFRSALAVRDSAAMRAHEVPALRAENERLRALLEIRG
                     RFGSGYLAAEVLRQT"
     gene            complement(355..1389)
                     /locus_tag="VGA78_04720"
     CDS             complement(355..1389)
                     /locus_tag="VGA78_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX9893200.1"
                     /translation="MKFPFSLDRLLPANEIAVDLGTANTLIYVKGEGIVLNEPSVVAI
                     ERSSGKIKGIGLEAKRMLGRTPEGIIAVRPLKDGVIADFDVTEKMLRYFLKTIIDKHL
                     FRVKPKVIVCVPSGITEVERRAVRDSAETAGAKEVLMVAEPMAAAIGVGLPVETPTGN
                     MVIDIGGGTTEIAVIALSGIVCDTSIRTGGDELDQAIVQFMRKNYNLLVGEPTAEAIK
                     IKIGSAWPVGEEREMEVKGRDLVSGIPKTVRVHSAEIREAVQEPIQQVVDAVRRALEI
                     TPPELSSDIVDRGIVMTGGGALIRGLDVLLAQETGLPIHVDEDPLTCVVRGTGRILDE
                     FDKYRSVLTT"
     gene            complement(1644..2084)
                     /gene="dut"
                     /locus_tag="VGA78_04725"
     CDS             complement(1644..2084)
                     /gene="dut"
                     /locus_tag="VGA78_04725"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001862.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX9893201.1"
                     /translation="MIPDVLVRRLEHGAGLPLPARATSGAAGYDIASAEDAIIAPLER
                     RLVATGFAFAIPAGYEMQVRPRSGLALRQGLTLPNTPATIDSDYRGELMIAVINLGTE
                     PVAVTRGMRIAQLVVAKVEAPGMVEVPDLPATDRGQGGFGSTGT"
     gene            complement(2134..3246)
                     /gene="ald"
                     /locus_tag="VGA78_04730"
     CDS             complement(2134..3246)
                     /gene="ald"
                     /locus_tag="VGA78_04730"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEX9893202.1"
                     /translation="MIIGVPKEIKTNENRVALVPAGAELLVGAGHTVYVEAGAGVGSG
                     FPDDAYQKSGARLIPSADEVWSKAAMIVKVKEPIAVEWPKMRAGQLIYTYFHFAAAEE
                     LTRAVIASQAVAVAYETVQLPNGELPLLTPMSEVAGRMAVQEGAKYLERVHGGRGVLL
                     GGVPGVAPAEVVVLGGGVVGINAAKIAAGMGAHVTILDISLDRLRYLDDVLPTNVDTV
                     YSNRHNILDAVSRADLVVGAVLLTGAKAPHLILRADLKQMKPGAVIVDVAVDQGGCVE
                     TIKPTTHEDPTYFVDGILHYAVANMPGGVPRTSTLALTNATLPYGLKLAKHGWKDACR
                     RDPALRLGLNVVAGKVVYPGVAEAFGLPLVEAESVL"
     gene            complement(3243..4532)
                     /locus_tag="VGA78_04735"
     CDS             complement(3243..4532)
                     /locus_tag="VGA78_04735"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX9893203.1"
                     /translation="MQIEQLDERLVRYVAPNGLRVLTEALPGVRSAAVGLWVRSASVH
                     EPPHLMGVSHLLEHMVFKGTERRSARQIALELESRGGSLDAFTSRDHTAFQAHVLDAD
                     LPVAVEVLTDLVRRPLLRQSDLDLERNVILEELSSVLDAPDDLVFELHARALWPTHPY
                     GYSILGTAETVQSITVGDLRTAHAAGYYPGNVIITAAGNIAADHLMTVLEREGWFEGT
                     EALPPRPPVAQVPAVRGSRLVEPRESQQCHLVFGTDTVPSRDPRRYAFALISTIMGGG
                     MSSRLFQQIREELGLAYAVFSFQQFYQTTGVTGVYLGTHADTAAQATDLVLAECRRLA
                     GEGLPHEDLAAGKQQLKGQVMLSLESPMSRMHRLGGVELSRDRYRRLDEILADIDAVR
                     AEEIQAVCQEFFAPERQTVVMLGRATADSRLVTTRRT"
     gene            complement(4537..6618)
                     /locus_tag="VGA78_04740"
     CDS             complement(4537..6618)
                     /locus_tag="VGA78_04740"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX9893204.1"
                     /translation="MNRIDTDFAGRRLTIETGRMAKQAAGSALVSFGDTVVLAAVTVS
                     SNMSTLPFFPLTVEYKEKTYAAGKIPGGFIKREGRPSEKEILAGRLIDRTVRPLFPEG
                     FRNEVQVFVTVISADQENDADVLGLVAASAALSLSQVPWQGPIAGVRVGRVDGHWILN
                     PTFQQLEVSTLDVVVSGTADSIVMVEGGALEVPEAEMLEALQVAQRGIKDLVALIDKL
                     LKTSAKPKMSWQPPTKDQGLVARVVELAEARMATAMNAKEKAARAVGLAEVKSSVVTA
                     LAEAYVERIKEVSTELEEVEYRVMRRQVLEQGERVDGRDLDTVRPIAVETSLLPRVHG
                     SALFTRGETQALVAVTLGTSDDEQRIDSIDFAGETTKSFMLHYNFPPYSTGEVKPMRG
                     TSRREIGHGALAERALQALLPAFDGFPYTLRVVSEILESNGSSSMATVCGGSLALMDA
                     GVPMKAPCAGVAMGLIKEGAKVAILTDILGSEDHLGDMDFKVAGTAQGITSIQMDIKI
                     TGLELALMGQALEKARKARLHVLKEMAKVLSTPRDDLSPYAPRIITIQIKPEKIGDVI
                     GPKGKTIRGIQDATGAKISVEDSGLVTIAAVGGEAGQRARDMVAAIVAEPEVGRTYEG
                     QVKSVVPFGAFVEIIPGVEGLLHISELQHGRTEKTEDVVKVGDTVTVKLLEVDERGRM
                     RLSRKALLPKA"
     gene            complement(6709..6969)
                     /gene="rpsO"
                     /locus_tag="VGA78_04745"
     CDS             complement(6709..6969)
                     /gene="rpsO"
                     /locus_tag="VGA78_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEX9893205.1"
                     /translation="MSFDKQSVITKHRITETDTGSARVQVALLTERINSLTDHFRTHP
                     KDHHGRRGLLQMVGMRRRLLTYLKRTDLQTYRSLIADLGLRH"
BASE COUNT         1113 a         2490 c         2219 g         1219 t
ORIGIN      
        1 atcgtctggc gcagcacttc ggccgccagg tacccgctgc cgaaccgtcc ccggatctcg
       61 agcagagccc gcagccgttc gttctcggcc cgaagggcgg gaacctcgtg ggcccgcatc
      121 gcggcggaat cgcgcacggc cagcgccgag cggaaccgag cccggctggt gcgcccttcc
      181 tcggcccgct gttgaagcca gatcagcggg agcagtgcgg tgtctcggat ggaggacgtc
      241 agtgccccgg tcatgggggc ggggagcgcc agcgcggtta tggacagacc aacacacgcg
      301 gcgaacagga tggtatcccg ccgcagcacg gtgcgccggc gcgcgcggag catgtcaggt
      361 ggtcagaacg ctgcggtact tgtcgaactc gtcgaggatt cggccggtgc cgcgcaccac
      421 gcaggtcaag ggatcctcgt ccacatggat ggggagcccg gtttcctgcg ccaacagcac
      481 atccagcccg cggatcaggg cgccaccgcc ggtcatgacg atgccgcggt cgacgatgtc
      541 gctcgacagc tcgggcggcg taatctcgag cgcgcggcgc accgcatcca ccacctgctg
      601 gatcggctcc tgcaccgctt cgcggatctc ggccgagtgc acccggaccg tcttgggaat
      661 ccccgagacc aggtcgcggc ccttgacttc catctctcgc tcttcgccca ccggccaggc
      721 cgatccgatc ttgatcttga tcgcctcggc ggtcggctcc ccgaccagca ggttgtagtt
      781 cttgcgcatg aactggacga tcgcctggtc cagctcatca ccgccggtgc ggatcgaggt
      841 gtcacacacg atcccggaca gcgcgataac cgcgatctcg gtggtgccgc cgccgatgtc
      901 gattaccatg ttgccggtag gcgtctcgac cggcagccct actccgattg cggccgccat
      961 cggttcggcc accatcagca cttccttggc gccggccgtc tcggccgaat cgcggaccgc
     1021 gcgacgctcg acttcggtga tgcccgacgg cacgcacacg atcaccttcg gcttcacccg
     1081 gaacaggtgc ttatcgatga tggtcttgag gaaataccgg agcatcttct cggtgacatc
     1141 gaagtcggcg atcacaccgt ccttgagcgg ccgcaccgcg atgatccctt cgggggttcg
     1201 gcccagcatc cgtttggcct cgagcccgat gcccttgatt ttgcccgatg agcgctcgat
     1261 cgctacgacc gaaggctcat taagaacgat tccttcccct ttgacataga tgagcgtgtt
     1321 agccgtgccg aggtcgaccg cgatctcgtt cgcaggcagg aggcggtcca gactgaaggg
     1381 aaacttcatt caaatggtct tggggtaagc tcggcgtaag ttaaaacaac acttggactt
     1441 caacaaggga gcctcatgtt ggttccaagg ttcccagtgc cccgtgccgg gtgcggttct
     1501 cggtgcggtg ccgggtgccg aaatgccgaa accgccggcg ccggagcgac tttcagcctc
     1561 gggtagggca aatcccctgc cagcacctgg aaccgacccg cggcaccgca ccccggaacg
     1621 aggaacccgg aaccgggaac ggttcacgtc cccgtgctcc caaacccacc ctggccccgg
     1681 tcggttgcgg gcaggtccgg cacttctacc atcccgggcg cttccacttt cgcgaccacc
     1741 agttgggcga tccgcatgcc ccgggtcacg gccaccggct cggtccccag gttgatcacc
     1801 gcgatcatca gctcgccccg gtaatcgctg tcgatggtgg cgggcgtatt gggaagcgtc
     1861 agtccctggc gaagcgccag accggagcgg ggccggacct gcatctcgta gccggcggga
     1921 atggcgaacg cgaacccggt ggccaccagc cgccgctcga gcggggcgat gatggcatcc
     1981 tccgcgctgg cgatatcgta gccggccgcc ccgctggtgg cgcgcgccgg gagaggcaat
     2041 ccggcgccgt gctccaacct ccgcaccagc acgtccggga tcatcgcctc ttccccggtc
     2101 cccgctccct gctccctgct ccctgctccc gactcacagg acgctttccg cctccaccag
     2161 cggcaatccg aaggcctccg ccacgccggg atagaccacc ttcccggcca ccacgttgag
     2221 tcccagccgt agggccggat ccctgcgaca ggcgtccttc cagccgtgct tggccagctt
     2281 gaggccgtaa ggcagggtcg cgttggtgag cgccagcgtc gaggtgcgcg gcaccccgcc
     2341 gggcatattg gccacggcgt aatgcaggat cccgtcgacg aagtaggtcg gatcctcatg
     2401 ggtggtcggc ttgatggttt cgacgcaccc accctgatcc accgccacgt ccacgatcac
     2461 tgctccgggt ttcatctgct tcaggtcggc ccggagaatc agatggggcg ccttggcccc
     2521 ggtcagcagg accgctccca ccaccaggtc ggcccgggac accgcgtcga gaatgttgtg
     2581 gcggttgctg tagaccgtgt ccacgttggt cggcagcacg tcgtcgagat agcgcagtcg
     2641 atcgagcgag atgtccagaa tggtgacgtg ggcacccatg ccggccgcga tcttggccgc
     2701 gttgatgccg accaccccac cccccagcac caccacttcg gccggcgcca ccccgggcac
     2761 gcctcccagt aggacgcccc ggccgccgtg cacccgttcc aggtatttgg cgccttcctg
     2821 caccgccatc cggcccgcca cctcggacat cggcgtcagc agcggcagct cgccgttagg
     2881 cagctgcacc gtctcgtacg ccaccgcgac ggcctgggag gcgatcaccg cccgggtcag
     2941 ctcctccgcc gccgcgaaat ggaaataggt atagatcagc tggcccgccc gcatcttggg
     3001 ccactccacc gcgatcggct ccttgacctt cacgatcatc gcggccttgc tccagacctc
     3061 gtccgccgag ggtatcagcc gggctcccga cttctggtag gcatcgtccg ggaagccgct
     3121 acccaccccc gcgcccgcct ccacatagac ggtgtggccc gcgcccacca gcagctccgc
     3181 cccggccggc accagcgcca cccggttctc gttggtcttg atctccttcg gcacgccgat
     3241 gatcatgtgc gcctcgtcgt cacgagtctt gagtcagccg tcgcccggcc cagcatcacg
     3301 accgtctgcc gctcgggggc gaagaattcc tggcacaccg cctgaatctc ttccgccctt
     3361 accgcgtcga tgtcggccag gatctcgtcc agccggcggt accggtcgcg cgaaagctcc
     3421 accccgccca gccggtgcat ccggctcatg ggactctcca gcgacagcat gacctgcccc
     3481 ttgagctgct gctttccagc cgcgaggtcc tcgtggggca ggccttcgcc cgccagccgc
     3541 cggcattccg ccagcaccag gtcggtggcc tgggcggccg tgtcggcgtg ggtgcccagg
     3601 taaacgccgg tgaccccggt agtctggtag aactgctgga acgagaagac cgcataggcc
     3661 aggcccagct cctcccggat ctgctggaac agccggctgg acatgccgcc gcccatgatg
     3721 gtggagatga gggcaaaggc atagcgccgc ggatcccggc tcggaaccgt gtcggtgccg
     3781 aacaccaggt ggcattgctg gctctcgcgg ggctcgacca gccggctgcc ccggacggcg
     3841 gggacctgcg ccaccggtgg gcggggcggc aaggcctcgg tcccctcgaa ccacccttcc
     3901 cgctccagca cggtcatcag gtggtcggcc gcgatgttgc ccgccgcggt gatgatcacg
     3961 ttgccgggat agtagccggc ggcgtgggcg gtacggagat ccccgacggt gatggactgg
     4021 actgtctcag ccgttcccag aatggaatag ccgtagggat gggtcggcca gagcgcccgg
     4081 gcatgcagct cgaagaccag atcgtcgggc gcgtccagaa cgctgctcag ctcttccagg
     4141 atcacgttgc gttcaaggtc cagatcgctc tgccgcagca gggggcgccg caccaggtcg
     4201 gtcagcactt cgaccgccac cggcagatcg gcgtccagga cgtgggcctg aaaggcggta
     4261 tggtcgcggg aggtgaaggc atcgagcgac ccgccccggc tctccagctc cagggcgatc
     4321 tggcgggcgc tgcggcgttc ggtgcccttg aacaccatgt gctcgagcag atgggagaca
     4381 cccatcagat ggggcggctc gtgcacgctg gccgaccgca cccacaggcc gaccgcagcg
     4441 gaccgtactc ccggcagcgc ctccgtcagg acccgaagcc cgttgggggc cacgtaccgg
     4501 acgagccgct cgtccagctg ctcgatctgc acccgcctag gccttgggca gcagcgcctt
     4561 gcgggagagc cgcatccggc cccgctcgtc gacctcgagc agcttgaccg tgaccgtgtc
     4621 gccaactttg acgacgtcct cggtcttctc ggtgcggccg tgctgcagct cgctgatgtg
     4681 gagcagcccc tcgacccccg gaatgatctc gacgaaggcc ccgaacggaa cgacgctctt
     4741 gacctgcccc tcgtaggttc gccccacctc gggctcggcc acgatggcgg cgaccatgtc
     4801 gcgggcccgc tgtcccgcct ctccaccgac cgccgcgatg gtcaccagac cgctgtcttc
     4861 gaccgagatc ttggccccgg tggcgtcctg gatcccgcgg atggtcttcc ccttgggacc
     4921 gatgacgtca ccgatcttct ccggcttgat ctggatggtg atgatccgcg gcgcataggg
     4981 cgagagatcg tcgcgcgggg tgctcagtac cttggccatt tccttgagca catgcagccg
     5041 cgccttgcgg gccttctcca gggcctggcc catgagggcg agctcgagcc cggtgatctt
     5101 gatgtccatc tggatcgacg tgatgccctg ggcggtcccc gccaccttga agtccatgtc
     5161 gcccaggtga tcttccgagc ccaggatgtc ggtcaggatg gcgaccttgg cgccttcctt
     5221 gatgagcccc attgccaccc cggcacaggg cgccttcatt ggcacccccg cgtccatcag
     5281 cgccagcgag ccgccgcaga ccgtggccat ggatgacgag ccgttcgact ccagaatctc
     5341 cgagaccacc cggagcgtgt acgggaagcc gtcgaaggcc ggcagcagtg cctgcagcgc
     5401 ccgttctgcc agcgcgccat ggccgatctc ccggcggctg gtcccccgca tcggcttcac
     5461 ctcgccggtg gagtagggcg gaaagttgta gtgcagcatg aacgacttgg tggtttcccc
     5521 cgcgaagtcg atgctgtcga tccgctgctc gtcatcactg gtacccagtg tgacggccac
     5581 cagcgcctgg gtctcacccc gggtgaagag ggccgagccg tggacccgcg gcaggaggct
     5641 ggtctcgacc gcgatcggcc gcaccgtatc gaggtcgcgg ccgtccaccc gctcgccctg
     5701 ctccagcacc tggcgccgca tcacccgata ttcgacctct tccagctcgg tgctgacctc
     5761 tttgatccgt tcgacgtatg cctccgcgag cgccgtgacc actgagctct tcacctcggc
     5821 cagccccacc gcccgggcgg ccttctcctt ggcgttcatg gccgtggcca tccgcgcctc
     5881 ggccagctcc accacccggg ccaccagccc ctggtccttg gtgggcggct gccagctcat
     5941 cttgggcttg gccgacgtct tcaacagctt gtcgatcaga gccaccaggt ccttgatgcc
     6001 gcgctgcgcc acctgaagcg cctcgagcat ttcggcctcg ggcacctcca gcgcccctcc
     6061 ctccaccatc acgatcgagt cggcggtgcc gctgacgacc acgtcgaggg tcgacacctc
     6121 gagttgctgg aaggtggggt tgagaatcca gtgtccgtcc acccgtccga cccgcacccc
     6181 cgcgatgggg ccctgccacg gcacctgcga cagactgagc gccgcggacg cggcgaccag
     6241 gccgagcacg tcggcgtcgt tctcctggtc ggccgagatg accgtgacga agacctgcac
     6301 ctcgttgcgg aacccttccg gaaacagggg ccggacggtc cggtcgatca gccggccggc
     6361 caggatctcc ttctcggagg gccgcccttc ccgcttgatg aagccgcccg ggatcttgcc
     6421 ggcggcatag gtcttttcct tgtactcgac cgtcagcggg aaaaacggaa gcgtggacat
     6481 gttggacgac acggtcaccg ccgccagcac gacggtatcg ccgaagctga ccagtgccga
     6541 gccggccgcc tgcttggcca tgcgcccggt ctcgattgtc aaacgccggc ccgcgaaatc
     6601 ggtatcaatg cgattcacgt cagtatccag aggtagaggc acgtcgaata acgaacaggg
     6661 gcgtcctcac tgtgcgtggt gggacgcccc tgggacaccg gctcagcgtt agtgcctgag
     6721 tccgaggtcg gcgatcagcg agcggtacgt ctgcaggtcc gttcgcttga ggtaggtgag
     6781 cagccgacgc cgcatgccta ccatctggag cagacccctt cgcccgtgat ggtctttcgg
     6841 gtgagttcgg aagtgatcgg tgagcgagtt gattcgctcg gtcaggagcg ccacctgaac
     6901 ccgggccgag cccgtgtcgg tctcggtgat gcgatgcttg gtgatcacgc tttgtttgtc
     6961 gaagctcatc tttccagcca cccagttcga ataacggggg attctcttaa tctgttgtag
     7021 cacagtaaaa tagacgacct c
//
LOCUS       DASWKS010000160        14845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_72560, whole genome shotgun sequence.
ACCESSION   DASWKS010000160 DASWKS010000000
VERSION     DASWKS010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14845
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72560"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..978
                     /locus_tag="VGA78_04750"
     CDS             19..978
                     /locus_tag="VGA78_04750"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HEX9893206.1"
                     /translation="MLTLTLSDFEKARARIAPHIHLTPLLTSRQLSELTGYDVRLKAE
                     MFQRVGSYKIRGPLNKFTFLTDEEKRRGVVCSSAGNHAQGVALAARIHGIRAVVCMAE
                     NATPAKIAATRAYGAEVVLHGRIWDEANEKAKELVRTEGLTYVSPFDDPDLIAGQGTL
                     GLEIVNAFPEAEAVVVPIGGGGLISGVSMAVKSHNPAIRVIGVESSDGPAMQRSIQAG
                     EVVTIDCGTIIDGLRVRRVGNHTFSVCQRFVDEIVALPDREIFDAVVWIMERCKLVAE
                     GAAAAPVAALLHGLVNLPKGSRVVCVLSGGNLNLDQLRGLAWN"
     gene            1086..1265
                     /locus_tag="VGA78_04755"
     CDS             1086..1265
                     /locus_tag="VGA78_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893207.1"
                     /translation="MSLEFLKTRPSLTVPVDQPSRYARSGYYPTHVTVEFDVPNAEYR
                     IVLNGLVYREAGRKY"
     gene            complement(1238..2581)
                     /locus_tag="VGA78_04760"
     CDS             complement(1238..2581)
                     /locus_tag="VGA78_04760"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893208.1"
                     /translation="MLPIILVCLTAADTVAPDLSWVRARMAELRVPGLAVAVVVDGKV
                     AWTRAFGVANRLTRDPAQESTVWPVASLGKPVTAYAALRLVQAGRLELDAPLVQHRPA
                     PAFLPRDSSRDAITLRHLLTHTSGLSNYLRDRTRRLRFTPGERYQYSGVGFMYLQQVL
                     EQTTGQSFDSAMAGLVFDPLEMPSAWFGRPRIGGAAATVHAALAQVLPPGGIMLGISA
                     IGAWILLIPVCAITRRRWRFGLWHEIMAVLVAAPVAWWLLARLGGSVMALYFTAIAAL
                     AYLGPLLVAAAVFAALRRASLALRLAAVGLVVAIGAGALFAGRAQPVPLPTWYSAEGN
                     AAASLRSSIGDLARFAAELVDPALLDSTTTGLLRSRAVRADSGLWWGLGIAVSGPESE
                     PRLIHRGSNPGVAALLVAVPSQRAAVVVVANAGHAAPLVQEVAERVLQYFRPASR"
     gene            2628..3653
                     /locus_tag="VGA78_04765"
     CDS             2628..3653
                     /locus_tag="VGA78_04765"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX9893209.1"
                     /translation="MRFRSFGRSGLKVTELCLGTMTFGAQADDVASFAIMDRAWDGGI
                     RFIDTADVYPVPMSFETYGATEQIVGRWLRHRGVRDEAILATKGYFPSGPAPHQRGNS
                     RRHLLEACEGSLRRLQTERIDLYLCHGWDPSVPIEETLRGLEELRTAGKILYAGVSNL
                     RAHELTDALLAAQSLRIEGFTGLQTRHNLLYREAEESLLPLARRFGLGVMAYNPLAGG
                     LLSGKYQAGTEPTEGRFTLGDTGATYRTRYWNEANLAAAAHAAELARDAGLAPVTAAV
                     AWSLAQPNIDSIIVGASRPDQLEASLAAPSANVPEALSDALGQIWFDLPRRPPTLDTP
                     RLEGLLR"
     gene            3696..4346
                     /locus_tag="VGA78_04770"
     CDS             3696..4346
                     /locus_tag="VGA78_04770"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX9893210.1"
                     /translation="MSPRRFRYGLVALALIGGGALLYLIRQASAARPAAVTIDPVGVV
                     TFTIGSAQAPIEVWEGSDYQCPDCSRFEVEAMPDIRRRFIETGRVRWRYLLFALPNHA
                     EAVPATHAMACALEQGQAKALVVHGGLFATQPEWSKSADHRTVFRRVAAGAGLDLGAY
                     DACMESNRYAAAVAKSWREAQRVGIPGTPTVLLYKRFYVGGLTANQLERVLTQPPE"
     gene            complement(4533..5567)
                     /locus_tag="VGA78_04775"
     CDS             complement(4533..5567)
                     /locus_tag="VGA78_04775"
                     /inference="COORDINATES: protein motif:HMM:TIGR04018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HEX9893211.1"
                     /translation="MERPIPHEPDLIVGAGPIGLACAISGRRRGTDPLVIDAGALANS
                     ITRYPIGMTFFTTPERLEIGDHPLVCAGQKATREEALKYYRGVVRTEGLRVRTWTRLL
                     GASREEGRIRCRLGTRLGEETLTCDRLVLATGYFDHANRLGVAGEDLLHVSHWFDEAH
                     LSAGQDVVVIGGKNSAVEAALLCFRAGARVTFVYRGPELKPSIKYWLRPDFENRVKAG
                     EIAARFNARIVTITPRQVVIANGAGDEERLPADRVYALTGYHPDFELFLSIGISFDQE
                     TGRPTLDRETLETNVPGVYLAGSVTAGRNISEVFIENGRFDGEKIFGDRTSRRRAEER
                     YINTPRPVGE"
     gene            complement(5658..7208)
                     /locus_tag="VGA78_04780"
     CDS             complement(5658..7208)
                     /locus_tag="VGA78_04780"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893212.1"
                     /translation="MWHRALLAGLASLSMARPLAAQVFPTDDAVIKRLWDEGMTPKSQ
                     VARLAQVLMDSIGPRLTGSPGHLSAVEWMQQQYRAWGVPVRAERYGTWRGWRRNYTRL
                     DLIAPRFRSLEATMLAWSPGTKGPVEGEVVLGPDVADSAAFDAWLPSARGKFVALYAP
                     PEPSCRAPESWEKLARPESAQRWKDDRERIRREYQARFGRYGRNAFQRLDAAGVAGLL
                     SGLWSEGWGVDKIFSSATRTVPHLHLSCEDYGLVLRLAANRQGPRLRLDARSEDLGEV
                     PVFNVVAELKGSEKPDEYVVLSAHLDSWDGASGATDNGTGTITMLEAMRLLKAAYPNP
                     KRSIVVGHWGGEEQGLIGSGAFAEDHPEIITGLQAAFNQDNGTWRVEYIRMMGFTRAG
                     EFFARWMSKVPREIENLVDYDIPGEPERGGSDHMSFICRGAPGFRLQSHYPDYRQYTW
                     HTNRDTYDKIVLDDLRNNATLAAMLAYLASEDPEKMPRDRRVLPTGQGGQPQQWPGCG
                     APRRSSGR"
     gene            complement(7305..7751)
                     /locus_tag="VGA78_04785"
     CDS             complement(7305..7751)
                     /locus_tag="VGA78_04785"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9893213.1"
                     /translation="MPALLMVDPPSDALPIGGQMQLAATPRSASGLEIPNRDVTWFSR
                     GPDIATVSSSGLVTAVFSGRTEIVAVTQPSTVQVKVGRTRQLDVFLLALSGKPLTDRP
                     VVFEGDRPGIAAVSSSSLVVAVAPGETIIRARSEGKEGTARVTVAR"
     gene            7829..8689
                     /locus_tag="VGA78_04790"
     CDS             7829..8689
                     /locus_tag="VGA78_04790"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9893214.1"
                     /translation="MTDSSTPGRAPALQSPEFGLALGLVVGRFAIGMNDLHYGYWTDD
                     LELTPQNLPLAQARYTDELMHDIPAGVRSVLDVGCGAGNTARKLLDRGLHVDCVSPNA
                     YLTAEARKVLGGRARVFESKFEDLTLDRSYDLILFSESFLFMKAEPALAKAEAGLVPG
                     GYILISDIFKLPTNAASPIGGGQSFPKYQALMGQSRFELLKDTDITERIAPTFDLLNR
                     AYAEAIRPAYDLILARTQASYPWLMRVVRWKFRDKIRRYEEKHFSGKRDGAHFRRHKS
                     YRRMLYRLRP"
     gene            complement(8701..9690)
                     /locus_tag="VGA78_04795"
     CDS             complement(8701..9690)
                     /locus_tag="VGA78_04795"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9893215.1"
                     /translation="MLFTRGAVIVLAAAAALPACSSEELGVGEVLVTSVVDIDPPGAG
                     IGIGTTQQLTATPKTASGIPIPNREVVWFTSNRLVATVSNTGLVKAVSLGRADITAEV
                     DQVSATVPVTVTPTPVAEAARVRFTDQPSNGIVGQPLSTIKVAVQDVIGGTVANATNP
                     VTIALANNPGNAALSGTRTVNAVNGVATFSDLQINRAGSGYTLRATSGELSPATSSAF
                     AVVSQNPSSLAITTQPSPTAVSGQRLQQQPVVQLRDSGGNDVAKAGIEIEASLQGSGG
                     KLGGTLKVSSDASGSARFTDLRITGSGNYRLRFRASGLGSVESGTIKVTADDD"
     gene            complement(9797..12307)
                     /locus_tag="VGA78_04800"
     CDS             complement(9797..12307)
                     /locus_tag="VGA78_04800"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9893216.1"
                     /translation="MNTGRYRLLAATAALAIGACSSDGTGAGDVLVVSQVEIDPPGAG
                     LVVGATQQLTATPKTASGITVPNREVSWSSDDPNIATVSASGLVTGVSLGETSINARV
                     DQVTESVPVNVSPKPVAQVVVEPTSATIQVAQSRQLTATVKAADGETLTGRTVEFESD
                     DPTIATVSTSGLVTGVAAGQTTVRAISEGKEAAASISVTPRPAARLAFTTQPTNGIAG
                     NSLAAIRVAVQDEIGGTVPNATNAVSIALDENPGNATLTGTLTVEAVAGVATFSNLEI
                     NRPATGYRLRATAGALAPAVSTTFAIVSGPPASMVITTQPSATAASGAPFAQQPVVQL
                     RDREGNNAAQPGVAVTAALVGSGGTLAGTLTVATDAGGAARFTNLRISGGAGEYQLQF
                     TAPALPAVTSSTITVMPSALEITTQPSASASSGTPLTQQPAVRLVDAGGDPVAQSGVV
                     ITVALSGSGGTLSGATSATTTGSGVATFSGLTITGTPGTYRLVFSSNGLASVTSSPIE
                     LGAGAAAELRIAVEPSSQAVSGLPFLIQPQVQLVDQNGTPVSTSGVTITASLASGSGT
                     LGGTLTAPTNASGRAEFSDLRITGSGEHTIRFSADGLTSVVSNPINVVLPAAAALELL
                     TQPSTTAVSGEGLGTQPQVRLLDDNGDPVSTDGVVITATIASAPGEGAGLTNDQATTS
                     ATGVAAFSGLTITGPAGDYTLRFTSGSLTPVVSEIITLTVPSPGPTQLIIVQQPDDQA
                     VSGQELDPQPTIRVDNAGAGMPGVDVLASVSTGGTLQGGTTKTSGSNGQAVFTNLRIK
                     AAPGVYILTFSAPALPAIAPVSSLPITISANVSPAPSP"
     gene            complement(12390..>14845)
                     /locus_tag="VGA78_04805"
     CDS             complement(12390..>14845)
                     /locus_tag="VGA78_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893217.1"
                     /translation="APQPAVQIQDASGNPVALAGRTITAVLATTPGGGGSTLSNATTT
                     SGANGVATFSGLTISGPLGNYTLRFQSTGLDPVSSDVITLIAGAPASITFATQPPSSV
                     QNGQPWSVSPRARVRDDDGNPVPGVTVTVALRTGLASAVLGGTLTQITGSDGIATFPG
                     LSLTGLLGNYRIGFNVGNLASSNSSSIELEEGPPAKLGITTAPSSTAANDRPFPVQPV
                     IQVQDVGGNPVDADGLIVTASIASGGGTLGGNTSDETSGSGRAVFSGLKITGTVGPRT
                     LRFSSGTLTPVTSGTINLVAGTATRIVMVTQPPSTIVANQVVVPNPVVDLEDVSGNDV
                     DSAGVVISVSQASGSGSLQGTLNRSTASNGRATYNDLRFSGTPGTRTLGFNRTGLEGA
                     VSSSVEVTPAPAQLVVTTQPPASARSSLPLSSTPRVQVRDAGGIAVAGVTVNATLVET
                     GSLNGTVTGVSDATGHVTFTGLAISGPVGVKTLRFSTPVSGVPAVNANPVTLAAGPAT
                     QLAMVTQPGTTATNGVDLSPQPAVRLEDSQGNPLDSANASVTAVLSQGNGTLNGTKTV
                     LTNASGQANFGGLDITGTAPGPFAIRFDATGLSSITSAAITLVAGQAGSLTVGTQPPA
                     SIASGAIFAPTAIVRDGGGNPVSGVEVTVSIAEGGGSLSGSVTRTTGADGVATFSGLA
                     LNGTAGPGHTLRFQAGALSAISNPFTLTVGAPTSISITVQPSGNATSGTAFSQQPEVE
                     LRDSGGNLVSGVNVTATLVPQGLASGSLNGTNPVATVNGLAAFPNLSITRTSILSNTY
                     QIRFSAAELNVLSNSIVVN"
BASE COUNT         2388 a         4958 c         5011 g         2488 t
ORIGIN      
        1 gggccttacc cttagctcat gctgacactg accctgagcg atttcgagaa ggcgcgggcc
       61 cgcatcgcgc ctcacatcca tctcacgccg ttactgactt cacgccagct ctccgagctc
      121 accgggtacg acgtgcgtct caaggccgaa atgtttcagc gggtcgggtc ctacaagatc
      181 cggggcccgc tcaacaagtt cacctttctc accgacgagg agaaacggcg cggtgtggtc
      241 tgctcgtcgg cgggcaatca tgcccagggt gtcgcgctcg cggcccggat tcatgggatt
      301 cgagccgtgg tctgcatggc cgagaatgcc accccggcca aaatcgcggc gacgcgggcc
      361 tacggcgccg aggtggtact gcacggccgg atctgggacg aagccaacga gaaggccaag
      421 gagctggtcc gcaccgaggg gctcacctac gtgagtccct tcgacgatcc cgacctgatt
      481 gcagggcagg ggaccctggg cctcgagatc gtcaacgcct ttcccgaagc cgaggcggtg
      541 gtggtgccga tcggcggcgg cgggctcatc tcgggggtct cgatggcggt gaagagtcat
      601 aatcccgcca tccgggtaat cggggtggaa tcatccgacg gacctgccat gcaacggagc
      661 atccaggccg gcgaggtcgt caccatcgat tgcggcacca tcatcgatgg ccttcgggtc
      721 cggcgggtgg ggaatcacac cttttccgtg tgtcagcgtt tcgtcgacga gatcgtggcc
      781 ctcccggatc gggagatttt cgacgccgtg gtctggatca tggagcggtg caagctggta
      841 gccgaaggcg cggctgcggc accggtcgca gccttgctgc acggactggt gaacctgccg
      901 aagggatcac gcgtggtctg tgtgttgagc gggggaaacc tgaacctcga tcagctgcgc
      961 ggattggcct ggaactaaac tgcctcccct ctcccctaga acgtgtcaca cgcttcgaag
     1021 ttgccggtat cgagcccgcg ccggaaccat ctcacgatgg ccggctcacc tcggtacagc
     1081 ccaaggtgag cctggaattt ctcaagacca gaccgagcct cacggttcca gtcgatcagc
     1141 cttcgcgcta cgcccggagc gggtactacc ccacccacgt cacggtggaa ttcgacgtgc
     1201 ctaacgccga gtatcgcatc gtgctcaacg gcctggtcta tcgggaagcg ggacggaagt
     1261 actgaagaac cctctccgcc acctcctgga ccagcggggc ggcgtgtccc gcattggcca
     1321 ctaccacgac cgccgcccgc tgggacggta ccgcgactag cagcgcggcc acccccggat
     1381 tactgccccg atgaatcagg cggggctcgg attccgggcc gcttactgcg atgcccaagc
     1441 cccaccagag gccggagtcg gcccgcaccg cgcggctccg gagcagtcca gtcgtagtcg
     1501 aatcgagcaa ggccggatcg accagctccg cggcaaatcg ggccagatct ccgatcgagc
     1561 tgcggaggga agcggcggca ttgccttcgg cgctgtacca ggtgggcaac gggaccggtt
     1621 gagcccgccc agcgaaaagg gctccggcac cgatagcgac gaccagcccg accgccgcca
     1681 ggcggagcgc gagggacgcg cgacgaaggg ccgcgaacac cgccgcggcg accaggaggg
     1741 gacccaggta ggccagggcg gctatggcgg tgaaataaag cgccatcacg ctcccaccca
     1801 gccgagccag caaccaccac gctaccggag ccgccaccag gaccgccatg atctcgtgcc
     1861 acaacccgaa gcgccagcga cggcgggtga tagcgcacac cgggatcagc aggatccacg
     1921 ctccgatggc cgagatgccg agcatgatcc cgcccggagg cagtacctgg gccagcgccg
     1981 cgtggaccgt cgccgcggct ccgccgattc ggggccgccc gaaccacgcg gacggcatct
     2041 cgagagggtc gaagaccagg ccggccatgg cggaatcaaa ggattgcccg gtggtctgct
     2101 cgagcacctg ctgcagatac atgaaaccga cacccgaata ctgatagcgt tcgcctggcg
     2161 tgaaccgcag cctgcgagtg cgatcgcgca ggtagttgga gagtcccgac gtgtgggtca
     2221 acagatgacg cagcgtgatg gcatcgcggc tggaatcgcg cggcagaaac gcgggcgccg
     2281 gccggtgctg aaccagcggg gcatcgagct ccagtcgccc ggcttgcacc agccggagcg
     2341 cggcataggc ggtcaccggc ttgccgagcg atgcgaccgg ccagacggta ctctcctggg
     2401 ccgggtcgcg ggtcaaccgg ttggccacgc cgaaggcacg agtccacgct actttcccgt
     2461 cgacgaccac ggcaaccgcc aggcccggta cccgcagctc cgccatccgc gcccggaccc
     2521 aggaaagatc cggcgccacc gtgtccgcgg cggtgaggca taccagaatg atggggagca
     2581 tcgtatttct tacggcgctc gacagacggg gtttcggaga gttcgcaatg cgctttcgat
     2641 cctttggacg ttccggcctc aaggtgaccg agctgtgcct cggcacgatg accttcgggg
     2701 ctcaggccga cgacgtggcc agtttcgcga tcatggaccg ggcctgggat ggcggcatcc
     2761 gcttcatcga cacggcagat gtgtatccgg tgccgatgag tttcgagacc tatggcgcca
     2821 ccgaacagat cgtgggacgc tggctccgcc atcggggagt aagggatgag gcgatcctcg
     2881 ccaccaaagg gtacttccca agcggacccg cgccgcacca gcggggcaat tcccggcggc
     2941 acctgctcga ggcctgcgag ggttcgctgc gccggctcca gaccgagcgg atcgacctct
     3001 acctctgtca tggctgggat ccgagcgtgc cgatcgagga gaccctgcgt gggctcgagg
     3061 agctgcgaac ggccggcaag attctgtacg ccggcgtgtc caacctgaga gctcatgagc
     3121 tcaccgacgc cctgctcgcg gcccagtcgc tccggatcga gggcttcacc gggctgcaga
     3181 cccgtcacaa cctgctctac cgtgaagcgg aggagtcgtt gcttccgctg gcgcgacgct
     3241 tcggcctggg agtcatggcg tataacccgc tggctggagg cctcttgagt ggcaagtacc
     3301 aggccggcac ggaaccgacc gagggacgct ttacactggg tgataccggt gccacttatc
     3361 gcacgcgcta ctggaacgaa gccaatctcg ccgcggccgc gcacgccgcc gagctcgccc
     3421 gtgacgccgg tctcgcgccg gtcaccgcgg cggtggcgtg gtccctggcc cagccgaaca
     3481 tcgactccat catcgtgggc gcgagccggc ccgatcagct cgaagccagt ctggccgcgc
     3541 cgtcggccaa cgtgccggaa gcgctgtccg acgcgctggg gcagatctgg ttcgacctcc
     3601 cgcgacggcc tcccacgctc gacaccccgc ggctcgaagg gctccttcga tagaacttca
     3661 ccagtaattc acgggatgcg gcggagattg ggggcatgtc gcctcgtcgc tttcggtacg
     3721 ggctggtggc cctcgcactg atcggcggtg gggcgctgct ctatctgatc cggcaggcct
     3781 cggctgcgag gccagccgca gtcacgatcg atcccgtggg cgtcgtcacc ttcaccatcg
     3841 gatcggccca ggcgccgatc gaagtgtggg aaggcagcga ctaccagtgc cccgactgca
     3901 gccgcttcga agtcgaggcc atgcccgata tccggagacg gttcatcgag accggccggg
     3961 ttcgctggcg ctacttgctg ttcgcgctgc ccaatcatgc cgaggccgta ccggccaccc
     4021 acgccatggc ctgtgcgctg gagcagggac aggcgaaggc ccttgtggtg cacggtggac
     4081 tgttcgcgac ccagcccgaa tggtcgaaat cggccgatca ccgaaccgtg ttccggcggg
     4141 tggcggcagg ggccgggctc gacttggggg cttacgatgc ctgcatggag agcaatcgct
     4201 acgcggccgc ggtggcgaag agctggcggg aagcgcagcg ggtaggtatt cccggcacgc
     4261 ccacggtgct gctctacaag cggttctatg tcggggggct tacggcgaat cagctggaaa
     4321 gggtgctcac gcaaccacct gaatgacgtt ccgggttcct ggttcctggt tcctggttcc
     4381 gcgtgccggg tgcggtgctg cgtgcggtgc tgagtgaggt gccccaggtg ccaaatcgct
     4441 tgggcgccag caaaggtaga acgcggaacg cctggcacgg ggaaccgcac tgtgcaccgc
     4501 acgtggcact tggaacggtg aacttggaac gttcattccc ccaccggtcg tggagtattg
     4561 atgtaccgct cttccgcccg ccgccggctg gtgcgatcgc cgaagatctt ctcgccgtcg
     4621 aaccgcccgt tctcgatgaa gacctccgaa atgttccgtc ccgccgtgac gcttcccgcc
     4681 aggtagaccc ccggtacgtt ggtttccagg gtttcccgat cgagcgtggg acgaccggtc
     4741 tcctgatcga agctgatgcc gatcgacagg aagagctcga agtcggggtg atacccggtc
     4801 agcgcataga cccggtcggc cggcagccgc tcctcgtcac cggcgccatt ggcgatcacc
     4861 acctggcgag gcgttatcgt cacgatccgg gcgttgaagc gagccgcaat ctcacccgcc
     4921 ttgacccggt tctcgaagtc gggacgcagc cagtacttga tactcggctt gagctccgga
     4981 ccccgataca cgaaggtcac gcgcgcgccg gcgcgaaagc agagcagggc cgcctcgacc
     5041 gccgagttct ttcccccgat gaccaccaca tcctgtccgg cgctgaggtg ggcctcgtcg
     5101 aaccagtggg agacgtggag caggtcctcc cccgcaaccc ccagccggtt ggcgtgatcg
     5161 aaatatccgg tggcgagcac cagccggtcg caggtcaggg tttcctcgcc cagtcgggtg
     5221 ccgagtcgac agcgaatccg accctcctcg cgtgacgctc ccagcaaccg ggtccaggtg
     5281 cggacccgaa gtccctcggt ccgaaccaca ccccggtagt acttgagcgc ctcctcccgg
     5341 gtggccttct gtccggcaca caccagaggg tggtcgccga tctcgagccg ttccggcgtg
     5401 gtgaaaaacg tcatgccgat cgggtagcga gtgatcgagt tggccagcgc gccggcgtcg
     5461 atcaccagtg gatcggtgcc gcggcgccgg cccgagatgg cgcaggcgag accgatgggg
     5521 ccggcgccga caatgagatc aggttcgtgg gggatcggtc tctccattga cgattgacga
     5581 ttgacagttg acgattacag cgcgatctcc actgtacgta attgtcaatc actaatggtc
     5641 aatcggcaat ggagccgcta ccgccccgag ctccgccttg gcgccccgca tcccggccac
     5701 tgctgcggtt gtccgccctg gccggtcggc agcacccggc ggtcccgcgg catcttctcc
     5761 ggatcctccg aagccaggta cgccagcatg gccgccagtg tcgcgttgtt ccggaggtcg
     5821 tccagcacga tcttgtcgta ggtgtcgcgg ttggtgtgcc aggtatactg gcgatagtcc
     5881 gggtagtgtg actgcagccg gaacccgggg gcgccccggc agatgaacga catgtggtcg
     5941 ctgccgcccc gctccggctc gcccggaatg tcgtagtcga ccaggttttc gatctcgcgc
     6001 ggtaccttgc tcatccagcg ggcgaagaat tcgccggctc gggtgaagcc catcatcctg
     6061 atgtattcga cccgccaggt cccgttgtcc tgattgaatg cggcttgcag cccggtgatg
     6121 atttccgggt gatcctcggc gaaggcgccc gacccgatca gcccctgttc ttcaccgccc
     6181 cagtggccca ctacgatgct ccgcttgggg ttggggtagg cggccttgag cagccgcatg
     6241 gcctcgagca tcgtgatggt gccggtcccg ttgtcagtgg caccggaggc accatcccag
     6301 gaatcgaggt gggccgacag caccacgtat tcgtcgggct tctcgcttcc cttgagctcc
     6361 gcgaccacgt tgaacaccgg tacttcgccc agatcctccg atcgggcatc gagccggagc
     6421 cgggggccct gccggttggc cgccaatcgc agcaccagtc cgtaatcctc acagctcagg
     6481 tgcaggtgag gcacggtccg cgtggcgctc gagaagatct tgtcgacccc ccatccctcc
     6541 gaccagagac cgctcagcag gccggccacg ccggcggcgt cgagacgctg gaaagcgttt
     6601 cgcccgtatc ggccgaacct cgcctggtac tctcgccgga tccgttcgcg gtcgtccttc
     6661 cagcgttggg ccgattcagg gcgggccagc ttttcccacg attccggggc gcgacagctg
     6721 ggctcgggtg gggcatacag cgccacgaat ttcccccggg cgctgggcag ccaggcgtcg
     6781 aacgcggcgc tgtcggccac gtccggaccg agcacgacct cgccctccac cggccccttc
     6841 gtccccggac tccaggccag catcgtcgct tcgagcgagc ggaaccgtgg ggcgatgaga
     6901 tccaggcgag tatagttccg ccgccagccc cgccaggtcc catagcgctc ggcccgaacc
     6961 gggacgcccc aggcgcgata ctgctgttgc atccactcca ccgcagacag atgtcccggc
     7021 gagccggtca ggcgcgggcc gatcgagtcc atcagcacct gggccagtcg cgcgacctgg
     7081 gactttgggg tcatgccttc gtcccaaagt cgcttgatga ccgcatcatc ggtgggaaat
     7141 acctgggccg cgagcgggcg ggccatgctc aggctggcca gtccggccag cagggcgcga
     7201 tgccacatgt agcgggctcc tggaggaaca gaaagacgaa acttaggcgt ctggctgatc
     7261 ctacgcgccc cggatcggag cgtttcagcc ggggcgcgcc gcgcctatcg agcgaccgtg
     7321 acgcgcgccg tgccttcttt cccctccgag cgggcccgga taatggtttc gccgggggcc
     7381 accgcgacca ccaggctgga gctgctgacc gccgctatgc ccggccggtc gccttcgaac
     7441 accaccggtc gatcggtcag cggcttaccg gagagggcca acaggaagac atccagctgt
     7501 ctggtccggc cgaccttcac ctggaccgtg gagggttggg tcaccgccac gatctcggtt
     7561 cggcccgaga agaccgcggt gaccagcccg ctcgacgaca cggtcgcgat gtccggaccc
     7621 cggctgaacc aggtcacgtc gcggttgggg atctccaggc cgctggcgct ccgcggggtc
     7681 gcagccaact gcatctgacc gccgatgggg agtgcgtcgc tggggggatc gaccatcaga
     7741 agagccggca tttgggttga ccggcgggtg cggaggtggt agtctctgcc cgcgcgaacc
     7801 ctcgttttcc ccgacccgag ttctaccgtt gactgattcc agcacgcccg gacgtgcacc
     7861 ggccctccaa tcgcccgagt tcggcctggc cctgggtctg gtggtaggcc gtttcgccat
     7921 cggcatgaac gatctgcact acgggtactg gaccgacgac ctcgagctca cccctcagaa
     7981 cctgccgctg gcgcaggcgc gctacaccga cgagctgatg catgacattc cggccggcgt
     8041 gcgctcggtg ctcgacgtcg gttgcggggc ggggaacacc gcccgcaagc tgctcgaccg
     8101 cggcctccac gtggactgcg tctcgcccaa tgcctacctc acggcggagg cgcggaaagt
     8161 tctgggcggc cgggcccggg tcttcgaatc gaagttcgag gacctgaccc tcgaccggag
     8221 ctacgatctg attctgttca gcgaaagctt tctcttcatg aaggcggagc cggccctggc
     8281 caaggccgag gccgggctgg tcccgggcgg atacatcctc atctcggaca tcttcaagct
     8341 gccgaccaat gccgccagcc ccatcggagg agggcagtct tttccgaaat accaggccct
     8401 gatgggccag tcgcgcttcg agctgctcaa ggacaccgac attaccgagc ggatcgcgcc
     8461 tacgttcgat ctgctgaacc gggcctacgc cgaagccatc cgccccgcct acgatctgat
     8521 cctggcccgg acccaagctt cctatccctg gctgatgcgg gtagtgcggt ggaagttccg
     8581 cgacaagatc cggcgctatg aggaaaagca cttcagcggc aagcgcgacg gagcccactt
     8641 tcgccggcac aaatcctatc gtcgcatgct gtatcgtctg aggccgtagg cgccgcgccg
     8701 tcagtcgtcg tccgcggtca ccttgatcgt gccggattcc accgatccga gaccgctggc
     8761 ccggaatcgc agccggtagt ttcccgatcc cgtgatcctg agatcggtaa agcgggcgct
     8821 gccgctcgca tcgctggaca ccttcagggt gccgcccagc ttcccacccg agccttgcag
     8881 cgacgcctcg atctcgatcc cggcctttgc cacatcgttc cccccgctgt cccgcagctg
     8941 caccaccggc tgctgctgca gccgctgccc gctgaccgcg gtgggtgagg gctgagtggt
     9001 gatggccagc gacgagggat tctgagagac gaccgcgaag gcactgctgg tcgccggact
     9061 gagctcgccc gaggtcgccc gcagggtgta cccggaaccg gcccggttga tctgcaggtc
     9121 gctgaacgtg gccaccccgt tgaccgcgtt gacggtccgg gtgccggaaa gggccgcgtt
     9181 gccggggttg ttggccagcg cgatggttac cggattggtc gcgttggcga ccgtgccgcc
     9241 gatgacgtcc tgcaccgcca ccttgatcgt gctgagcggc tggcccacga tcccgttgct
     9301 cggctgatcc gtgaagcgca cccgggcggc ctccgccacc ggtgtgggcg tgaccgtgac
     9361 cggcaccgtc gccgagactt gatccacttc ggccgtgatg tcagcccgtc ccagggacac
     9421 cgccttcacc aggccggtat tggagacggt cgccaccagc cggttggacg tgaaccagac
     9481 cacttcccga ttggggatcg ggatgccgct cgcggttttc ggggtagccg tgagttgttg
     9541 ggtggtgccg atcccgatcc ccgcacccgg agggtcgata tcgaccaccg aggtgaccag
     9601 cacttcgccc acgccaagtt cttcggatga acaggccggg agagcggcgg ccgccgccag
     9661 cacgatcaca gcaccacgag tgaagagcat accgcgtcag ctaccgtaat aggtaccgac
     9721 gcgcgagtac tgtggcgcta cacagaggct cccaccatgc ggggccggct caccttcacc
     9781 gtccccggtg ggggggctaa gggctggggg cgggactgac gttggcgctg atggtgatgg
     9841 gcaacgagga gaccggcgca atggccggaa gggctggcgc cgagaaagtc agtatgtaga
     9901 cgcccggcgc ggccttgatc cggagattgg tgaacaccgc ctgcccgttg ctccccgagg
     9961 tcttggtcgt gccgccttgc agcgtgccac cggtggaaac cgacgccagg acgtcgacac
    10021 cgggcatgcc ggctccggcg ttgtcgaccc gaatggtcgg ctgcggatcg agttcctggc
    10081 cgctgactgc ctgatcgtcg ggttgctgga caatgatcag ctgggtcggt cctggagacg
    10141 gtaccgtgag cgtaatgatc tccgagacca cgggggtgag tgagccggag gtaaagcgga
    10201 gcgtgtagtc cccggccggc ccggtgatgg tcagcccgct gaacgcggcc actccggtag
    10261 cgctggtagt ggcctgatca ttcgtgagcc cggccccctc gcccggggcg gacgcgatgg
    10321 ttgccgtgat cacgacaccg tcggtgctga cggggtcgcc gttgtcatcc agcagacgca
    10381 cctggggctg ggtgcccaac ccttcgccgc tcaccgccgt ggtggagggc tgggtcagca
    10441 gctcgagtgc cgcggcagcc ggcaggacga cgttgatggg gttcgacacc accgaggtca
    10501 ggccgtcggc gctgaagcgg atggtgtgct cccccgaccc ggtgatccgg aggtcgctga
    10561 actcggcccg ccccgacgcg ttggtcggtg ccgtcagggt gccgcctaac gtcccgcttc
    10621 ccgaggccag cgaggccgtg atggtgacgc cggaggtgct gaccggtgtt ccgttctgat
    10681 ccaccagctg gacctggggt tgaatcagga acggcagccc gctcaccgcc tggctcgacg
    10741 gctcgaccgc gatccggagc tccgccgccg cgcccgctcc cagctcgatg ggcgatgagg
    10801 tcaccgaggc gagcccgttg gagctgaaca ccagccggta ggtgcccggg gtcccggtga
    10861 tcgtcagtcc gctgaaggtg gcgacccccg acccggtggt ggtggcggag gtagcgccgc
    10921 tcagagtccc gccgctgccg gacaacgcca cggtgatgac gaccccggat tgcgccaccg
    10981 ggtctccccc ggcatcgacc agccggaccg ccggctgctg ggtcagcggc gtgccgctcg
    11041 atgcactggc cgagggctgg gtcgtgatct ccaaggcgga aggcatcacg gtgatggtcg
    11101 acgacgtgac cgctggcagt gcgggcgcgg tgaactgaag ctggtactca cccgcgccac
    11161 cactgattcg gaggttggtg aaacgggccg cgccaccggc gtcggtcgcg accgtcaggg
    11221 ttcccgccag ggtgccgccc gacccgacca gcgcggccgt cacggccact ccgggctggg
    11281 ctgcattgtt gccctcccgg tcccgcagct ggaccaccgg ttgttgcgcg aagggtgcgc
    11341 cgcttgcggc ggtggcggac ggctgggtcg tgatcaccat cgacgccggc gggccggaga
    11401 cgatcgcgaa cgtggtgctc accgccgggg ccagcgcccc ggcggtcgcc cggagccggt
    11461 atccggtggc cggtcggttg atctccaggt tggagaacgt agccacgccc gccacggcct
    11521 cgaccgtaag ggtgccggtc agggtggcgt tgccggggtt ctcatccagg gcgatgctga
    11581 ccgcgttggt cgcgttgggc acggtcccgc cgatctcatc ctgcaccgcg acccgaatcg
    11641 cggccaggga attcccggcg atgccgttgg tcggctgggt ggtgaacgcg agccgcgccg
    11701 ccggacgcgg ggtcaccgag atgctggcgg cggcttcctt tccctcggag atcgctcgca
    11761 ccgtcgtctg tccggcggca acgccggtca ccaggccgct ggtggacacc gtggcgatgg
    11821 tgggatcatc gctctcgaat tccacggtcc gtccggtcag cgtttctcca tcggccgctt
    11881 tgaccgtggc cgtcagctgc cgggactgcg ccacctgaat cgtcgccgag gtcggctcca
    11941 ccacgacctg agcgaccggc ttgggggata cgttgaccgg cacgctttcg gtcacctggt
    12001 ccacccgggc gttgatgctg gtctcgccca gcgaaacgcc ggtcaccagg ccgctggccg
    12061 acaccgtcgc gatgttggga tcgtcgctcg accagctgac ctcgcggtta ggcaccgtga
    12121 taccgctggc cgtcttgggc gtggcggtga gctgctgggt ggcgccaacg accaatcccg
    12181 cacccggtgg atcgatctcg acctgagaga cgaccagtac gtcacccgcg ccggttccgt
    12241 cggaggaaca ggcaccgatg gcgagggcgg ccgtcgccgc gagcagtcga tagcgtccgg
    12301 tattcatgtg gcgctataaa ccgacgctcc agcttcagcg cgctaacaca tcgcgcggtt
    12361 ggctagcatt acccggcgat cgagacgccc taattcacga cgatgctgtt cgaaaggacg
    12421 ttcagttcgg cggcgctgaa gcgaatttgg tacgtgttgg aaagaatcga cgtccgggtg
    12481 atgctcagat tgggaaatgc agccagcccg ttgaccgtgg cgaccggatt ggtgccattg
    12541 agggagccgc tggcgagacc ctgtggaacc agggtcgccg taacattgac cccgctcacc
    12601 agattgccgc cgctgtcccg cagctcgacc tccggttgct gactgaaggc cgttccggag
    12661 gtcgcattgc ccgagggttg gaccgtgatc gagatgctgg tcggtgcccc gaccgtcagg
    12721 gtaaaggggt tcgagatcgc gctcaaggct ccggcctgga agcgcagggt gtgtcccggg
    12781 ccggccgtcc cgttcagggc cagcccggag aaggtggcca ccccgtcggc gccggtggtg
    12841 cgtgtcaccg acccgctcaa actgcctccg ccctcggcga tggacacggt gacttcaacg
    12901 ccgctgaccg gattgccccc accgtcgcgt acgatggcgg tgggcgcgaa gatggcgccg
    12961 ctggcgatgc tggccggtgg ttgggtgcct accgtgagac tgccggcctg ccccgccacc
    13021 agcgtaatcg ccgcggatgt gatgctgctg agaccggtcg catcgaaacg aatggcaaag
    13081 gggccaggcg cggtcccggt aatatccagc ccgccgaagt tcgcctgtcc gctggcgttg
    13141 gtgagcaccg ttttggtgcc gttgagcgtg ccgttccctt gggacagaac cgctgtgaca
    13201 ctggcgttgg cagagtcgag cggattgccc tgactgtcct ccagccggac cgccggctgg
    13261 ggagagagat ccacgccgtt ggtggccgtg gtccccggct gcgtcaccat cgccagttgg
    13321 gtggcggggc cggccgccag ggtcacggga ttggcattca ccgccggcac acccgacacc
    13381 ggagtgctga accggagcgt cttcaccccg accggtccgc tgatggcgag cccggtaaag
    13441 gtcacatgcc cggtggcatc gctcactccc gtgaccgtgc cgttgagcga gccggtctcg
    13501 accagcgtcg cgttgaccgt cacccccgca acagcgattc ccccggcgtc acgtacctgc
    13561 acccttggcg tgctcgagag ggggaggctg ctccgcgccg aggccggggg ctgggtggtg
    13621 actaccagtt gggccggggc cggcgtcacc tcgacgctgg aggagacggc cccctccagt
    13681 ccggtccggt tgaagcccag ggttcgggtc cctggggtac cgctgaaccg gaggtcgttg
    13741 taagtcgccc ggccgttcga ggccgtgctc cggttcagcg tgccctggag cgagccggat
    13801 ccgctcgcct gggataccga gatgacgacg ccggcggaat cgacgtcgtt gccgctcacg
    13861 tcctccagat ccaccaccgg attgggaacc acgacctggt tggcgacgat ggtcgacggg
    13921 ggctgggtca ccatcacgat ccgggtcgcg gtcccggcca ccaggttgat ggttcccgaa
    13981 gtcaccgggg tcagggtgcc cgagctgaat cgcaacgtcc gggggcccac cgtgccggtg
    14041 atcttgaggc cggagaacac ggctcggccc gacccgctgg tctcatccga ggtattacca
    14101 cccagcgtgc cgccgccgct cgcgatcgag gccgtgacaa tcagcccgtc ggcgtcgacc
    14161 ggattgccgc ccacgtcctg cacttggatc accggttgca ccgggaaggg ccggtcattc
    14221 gccgcggttg acgagggggc ggtggtgatc cccagtttgg caggcggtcc ctcctccagc
    14281 tcgatgctgc tggagttgga tgaggcgagg ttgcccacgt tgaagccgat ccggtagttg
    14341 ccgagcagcc ccgtcagcga gagacccggg aaggtcgcga tcccgtcgct cccggtgatc
    14401 tgggtcaggg tgccgcccaa gactgccgag gccaatccgg tccggagggc caccgtcacc
    14461 gtcacgcccg ggaccggatt cccgtcgtcg tcccggaccc gcgcccgcgg actgacgctc
    14521 cagggttgtc cgttctggac ggacgagggc ggctgggtcg cgaaagtgat gctggccggt
    14581 gcgccggcga tcagggtgat gacgtccgag ctgaccggat ccagcccggt gctctggaac
    14641 cgcagggtat agttgcctaa cggtcccgag atggtcaggc cgctgaacgt cgccacgccg
    14701 ttggcaccac tcgtggtagt ggcgttgctg agggtcgaac cgccccctcc tggagtcgtc
    14761 gccaacaccg cggtgatggt gcgccccgcc agcgcgaccg ggttgccgct ggcgtcctgg
    14821 atctgcaccg ccggttgcgg tgcca
//
LOCUS       DASWKS010000161         2899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3042918, whole genome shotgun sequence.
ACCESSION   DASWKS010000161 DASWKS010000000
VERSION     DASWKS010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3042918"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VGA78_04810"
     CDS             <1..250
                     /locus_tag="VGA78_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893218.1"
                     /translation="IEKEDRGANGQEPDCSRDAAGLPHGHDETATLGICQAADPQPLT
                     RPQILRRILPGPPVEVVDPSVERSRTLFRWFPYCPSND"
     gene            298..>2899
                     /locus_tag="VGA78_04815"
     CDS             298..>2899
                     /locus_tag="VGA78_04815"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9893219.1"
                     /translation="MRVRLKRDELVRIVAASSLSQNHWAIKLGFSRGHWSEIVNGKHP
                     FPSPLTRERMLEVFGVPFDALFAIEEGAVPDTELEFKQAIRHRYSLIRELAQGGMGTV
                     YLAMDVQHGRQVALKVMSTEAIGGIGAAELLKEIALVARLQHPNILPLFDSGEAAEQP
                     WYVMPWIRDGSLRNLLSSEGRLTAGQVVSLISPIAAALEHAHGEQVLHCDIKPENVLL
                     HGRHPYVMDFGIARKLHSESREWAGLRRELDFSAGTPAYVSPEQANGDPDLDVRSDVY
                     SLACVTYEMLAGRPPFQGTTTREIVTRRFRAPAPDLREWAPEVPRPVVDLLQRAMSLE
                     RGQRPSSATEYAVALAEAARGGSGRMAQARVGASRLLDRMSRGMGLQPSQPLGSALSG
                     MGKDLTLAWRGLRRAPGFALVVILTLGLALGANATMFGVADRLLLRPPAGIGHPEQVR
                     RVLVARWINGLGDPRVSLSYPHFEDYRDRTRSFSQVAAMDQVVYSYGIGPSARPVNAA
                     LVTGQYFALLEVPAFLGRYFGEPEDQAPAGTPVAVLSHAFWRSAFGGDSAVLGRTIPL
                     GSQRFTVIGVTPRGFNGTELSPVDLWLPMSTLTLGVFGETTWRTDRDSQWLQVFARLR
                     PGVTDGAAESDATHAYRATHLDDRGEFHRLAVTRLGTLVAGANPMARDRTGRVSAWLL
                     GVAAILLVIGCANIANLMLARGLMRRGEFAVRLALGVSRGRLLRQLLTESLLLAGLGA
                     LVGITVLAWGTDLIRAVLLPGTAWDEGTLNPRVLIVTLGTTLLAALAAGLFPLLRATR
                     VDVATQLHGGPRATAAHARRLRGTLLLVQTSLSTALLIGAGLFLRSIRAVNALDLGFE
                     PRAVSAVSVDL"
BASE COUNT          428 a          968 c          990 g          513 t
ORIGIN      
        1 aatagagaag gaagaccggg gtgcaaacgg tcaggaaccg gactgctcgc gcgacgcggc
       61 ggggctgcca catggccacg atgagactgc gaccttgggg atctgtcaag cagccgaccc
      121 ccaaccgctg accaggccgc agatcctgcg ccgcattctg cccgggccgc cagtggaggt
      181 ggtcgacccg tcggtcgaac gatcacgaac actttttcgg tggtttccct actgcccatc
      241 caacgattga cccagtttaa acatctttcc tgatgaaccc tcgaacgaga agccccggtg
      301 cgtgtccgtc tgaaacgtga cgagctggtc cggatcgtgg cggccagctc cctcagccag
      361 aaccattggg caatcaagct cggcttttcc cgaggccact ggtccgaaat cgtcaatggc
      421 aaacacccct tcccctctcc cctgacccgg gaacgaatgc tggaggtgtt cggggtcccg
      481 tttgacgccc tctttgcgat cgaggagggg gcggttcccg acactgagct cgagttcaag
      541 caagccatcc gccacaggta ctccctgatt cgcgagctgg cgcagggcgg catgggtacc
      601 gtgtatctgg cgatggatgt ccagcacggc cgccaggtgg cgctcaaggt gatgtccacc
      661 gaggcgatcg gcggcatcgg cgcagcggaa ctgctcaagg aaatcgccct cgtcgcccgg
      721 ctgcagcatc ccaacatcct gcccctcttc gactcggggg aggcggcaga gcaaccgtgg
      781 tatgtgatgc cctggatccg ggatggctcg ctccggaacc tgctctcgag cgagggccgg
      841 ctgaccgcgg gccaggtcgt ctctctcatc agccccatcg cggctgcgct ggagcacgcc
      901 cacggtgagc aggtgctcca ctgcgatatc aagccggaga acgtgttgct gcatggccgc
      961 catccgtacg tgatggactt cggcatcgcc cgcaagctgc atagcgagtc ccgggagtgg
     1021 gccggcctca ggcgggagct ggacttctcc gccggcaccc cggcctacgt cagtcccgaa
     1081 caggccaacg gcgatccgga tctcgacgtc cggtccgatg tctacagcct ggcctgcgtg
     1141 acatacgaga tgctggcggg ccgtccgccg ttccagggta ccaccacccg ggagatcgtc
     1201 acccgccgat tccgggcgcc ggcgcccgac ctccgcgagt gggcgcccga ggttccccgt
     1261 ccggtggtgg acctgctgca acgggccatg tcgctggagc gggggcagcg tccttcgtcc
     1321 gccacggagt acgcggtcgc tttggccgag gccgcccggg gtgggtcggg gcggatggcc
     1381 caggctcgag tgggtgcctc ccggctgctc gaccggatgt cgcgagggat gggactgcag
     1441 ccatcccagc cgctggggag cgcgttgagt ggaatgggaa aagatctcac cctggcgtgg
     1501 cgcgggctgc ggcgagcccc gggcttcgcg ttggtggtga tcctcacgtt aggcctcgcg
     1561 ctgggcgcca acgccaccat gttcggcgtg gccgaccggt tgctcttgcg cccgcccgcc
     1621 ggcatcggcc atccggaaca ggttcggcgg gtgctggtcg cgcgctggat caacgggctg
     1681 ggcgatccca gagtctcgct gtcctacccg cacttcgagg actaccgcga ccggacccgc
     1741 agcttcagcc aagtggccgc gatggaccag gtggtctatt cctatggtat cggtccctcg
     1801 gcccgtccgg tgaacgccgc cctcgtcacc ggccagtact tcgccctgct ggaagttccg
     1861 gcattcctgg gccgctactt cggcgagccg gaagatcagg cgcctgccgg cacgccggtg
     1921 gcggtgctgt cacatgcgtt ctggcggtcg gccttcgggg gtgatagcgc ggtcctgggc
     1981 cggactatcc cgctcggcag tcagcgcttc acggtcatcg gggtgacgcc gcgcgggttc
     2041 aacggtaccg aattgtcgcc ggtggatctc tggctgccga tgtcgacctt gacgttaggc
     2101 gtgttcgggg aaaccacctg gcgaaccgac cgggattcgc agtggttgca ggtcttcgcc
     2161 cggcttcggc ccggcgtcac cgatggcgcc gcggagagcg acgccaccca cgcctaccgg
     2221 gccacccacc tcgacgatcg aggcgagttt catcgcctgg cggtgacccg cctcggcacg
     2281 ctggtcgcgg gcgccaatcc gatggcccgg gaccggaccg gccgggtctc ggcctggctg
     2341 ctcggtgtgg cggccatcct gctggttatc gggtgcgcca acatcgccaa tctgatgctg
     2401 gcgcgggggc tcatgcggcg gggcgagttt gccgtgcgat tggccctggg ggtatcgcgc
     2461 ggacggctgc ttcgccagct gctcaccgaa agcctgttgc tggccggact cggcgccctg
     2521 gtggggatca ccgttctcgc ctggggaacc gacttgattc gggcggtgtt gctccccggt
     2581 accgcgtggg acgaaggaac cctcaacccc agggtgctga tcgtgacgct cggcaccacc
     2641 ctgctggccg cgttggcggc gggactcttt ccgctgctcc gcgccacccg ggtggacgta
     2701 gcgacccagc tgcatggcgg gccacgggcc acggcagccc acgcgaggcg gttgcgggga
     2761 accctcctgc tggtgcagac cagtctttcg accgcgcttc tgatcggcgc cggcctgttc
     2821 ctccggagca tacgcgcggt gaatgcactg gatctgggat tcgagcctcg agcagtatcg
     2881 gcggtttcgg tggatctgg
//
LOCUS       DASWKS010000162         7331 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3390872, whole genome shotgun sequence.
ACCESSION   DASWKS010000162 DASWKS010000000
VERSION     DASWKS010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3390872"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VGA78_04820"
     CDS             complement(<1..653)
                     /locus_tag="VGA78_04820"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9893220.1"
                     /translation="MTSAATAVLDWYLECSECGATRGPEGVPTVCECGRPWLVRYPDR
                     VHPVTERAELRRRHGMWRYRSFLPLAGGEPPVSLGEGDTPLLKVPRLGADLGLPGLWV
                     KDEGANPTGSFKARGLSAALTRAVAAGVTRFTLPTAGNAGIAASAYAARAGAEVKVFA
                     PRSTPATILRQIELFGGQLVLLDGHIGDCGKASRAWAAETGAMDLSTLREPYRIEGK"
     gene            complement(650..2452)
                     /gene="uvrC"
                     /locus_tag="VGA78_04825"
     CDS             complement(650..2452)
                     /gene="uvrC"
                     /locus_tag="VGA78_04825"
                     /inference="COORDINATES: protein motif:HMM:NF001824.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX9893221.1"
                     /translation="MSALARKLTTLPAGPGVYLWKDAEGKVLYVGKAKSLRSRVRSYL
                     ASDHSGSVKNARLRQLIADVETIVVSSEAQSLLLENNLIKEHQPRFNIRLKDDKSYPC
                     IAVTLQEPFPRVLVTRRRNLPGARYFGPFTDVAAMRRMLAIVRRIFTVRSCSDDLPRE
                     PRDRPCLDYHIGRCRAPCVGWQDQPDYRGMITEVVSFLEGDTVDVRTRLRQMMQQASD
                     QTDFERARELRDTLRWLEQVEAPSEVEVTTRGDADVIGFARDGDDAVGLFLRVRDGRV
                     VARDHRFLENLEEERDEDVLSAFIVRYYVPAEDRGRRLMLPFAPANLPELETLVPDAV
                     VNIPRRGRAWRLVELADQNARHLLESLRLESFAVEERAEDPVYALGRDLGLSLVPRGL
                     VCVDISHNQGRDMVGSLVWFEAGRPKKSEYRKFRIKGLAEQDDFAAIHEVVSRYLKRR
                     CDEHLPLPDLMVIDGGKGQLSAALDAARALDQADLPIVSLAKRDEEVFLPGRPEPVRL
                     SRRSSSLRLLQRIRDEAHRFGLAYNRNRRTQRTLTSELLEIPGVGPNRRRALLERFGS
                     LAGVRSATVAELADVAGVSTGMAARIHQYLVDHP"
     gene            complement(2640..4163)
                     /gene="murJ"
                     /locus_tag="VGA78_04830"
     CDS             complement(2640..4163)
                     /gene="murJ"
                     /locus_tag="VGA78_04830"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEX9893222.1"
                     /translation="MFVAGGIMLSRLAGLIRQRALAHYLGLGDQADAFAAAFRIPNII
                     QNLFGEGALSAAFIPVYARRLGAGDPEGARRVAGAVLGQLGLVISLVVLAGVLSAPLL
                     VAGLAPGFEGEKRALTVLLVRVLFPGAGLLVFSAWCLGILNSHRRFFLSYAAPVAWNL
                     AIIITVLWAGPRLDPAGVTVAAAGASVAGSLLQVLVQLPLARRLAERPPVSLGRGDPL
                     VGEVRGAFAPALLSRGVVQVSAFVDSFIASLLPTGAVAALTNAQLLYQLPVSLFGMSI
                     AAAELPAMASATGNAEEVSAALRQRLRQAGERVAFWVIPSAAAFMALGHMIAGLVFQS
                     GRFSAADARYVWGILALASVGLLASTLARLFGSAFFALGDTRTPFRCAATRVALATVF
                     GFLAAWFGPGLLQLDPKWGVAGLGLASGLAGWVEFGLLRHALRQRIGEVRLPPGRVAA
                     LWMAAGGGALAGWGVLLLLPDSPLFLRSIVSLGAFGVVYLLITYLLGIPQAVGLLRR"
     gene            complement(4187..4477)
                     /locus_tag="VGA78_04835"
     CDS             complement(4187..4477)
                     /locus_tag="VGA78_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893223.1"
                     /translation="MGILLVGLIMLVALLIPIFGIVVDSPIGRAIARRLEGPEQAVAP
                     NLIDLGKKVELLEAEVDDLTRAVENLRDENQFLQRLLEESPGRQSLPPRSTP"
     gene            complement(4491..6017)
                     /gene="bshC"
                     /locus_tag="VGA78_04840"
     CDS             complement(4491..6017)
                     /gene="bshC"
                     /locus_tag="VGA78_04840"
                     /inference="COORDINATES: protein motif:HMM:TIGR03998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HEX9893224.1"
                     /translation="MRIVTTPLAPSVPLPPLSRSGGVAESLLAALVAAPGVEAIRSRL
                     RDPAVVVVTTGQQPGLFTGPLYTLYKALSASAIAQELEHRWGRPVVPVFWAAGDDHDY
                     AEARWASWLDGHGELVTATLPDRAPDAPLTAMARLPLPAEVTGLIEQLEGAVPASPQR
                     EQTLAWLGRHYAPGRTLGAAYAGALAELFAPLGIACFDSTHPSAKAAMVPVLMEALGR
                     AAELDRALADQASALAAAGRPITVPVGDGATLVFLEDGAGRDRLVLDQGSFVARRSGT
                     RATLAQLETIAAAMPERLSPNVLLRPVTESALLPTVAYVAGPGELAYFAQCTPLYDRL
                     GVPAQLPVPRWSGIIVEPRVDRVLEKFGATLADLLEPGTALEGRVIRSHLPAALIAAA
                     DRLRQAMDHEYHTILDGAIQIDPTLERPVGAALHHAQTGLSDIEKKIQAHLKKREATE
                     LSQIGRARSAVAPGGKPQERVLTGAAWLARYGPTLLDQVRAEAAGWYAGALAARAGAS
                     "
     gene            complement(6150..6608)
                     /locus_tag="VGA78_04845"
     CDS             complement(6150..6608)
                     /locus_tag="VGA78_04845"
                     /inference="COORDINATES: protein motif:HMM:NF014629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX9893225.1"
                     /translation="MHILAIGKLRPALRVVADEYLRRLGRYVRVEERELPEAGKAGNA
                     TAQRREEAARLLGALPADAVVIALTREGDGWSSADLARRLGRWRDGSRPVAFLIGGAE
                     GLAGDLLEQATQRWSLSPLTLPHELARVVVLEQIYRGFTILAGEKYHKAR"
     gene            complement(6708..>7331)
                     /locus_tag="VGA78_04850"
     CDS             complement(6708..>7331)
                     /locus_tag="VGA78_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate dehydrogenase"
                     /protein_id="HEX9893226.1"
                     /translation="QGARVAVQGFGNVGSITAMLMEEQGMKVIGVSDHSGAVYNPRGL
                     DVKETMAWTAQHRTLDGYPSGDRITNAELLQCDCEVLVPAALENQITADNAAQIKARV
                     ICEGANGPTAAAADPILESNGIFVIPDILANAGGVTVSYFEWVQDRGGYFWDEDTVNQ
                     RLERIMEQSFDQVASMSDKHHVSMRAASYMLAIDRVAEVHRLRGLYA"
BASE COUNT         1208 a         2613 c         2472 g         1038 t
ORIGIN      
        1 ttcttgcctt cgatgcggta gggctcccgc aaggtggaga gatccatggc gccggtctcg
       61 gcggcccagg cgcgggaggc cttgccacaa tcgccgatat ggccgtcgag cagcaccagc
      121 tgtccgccga acagctcgat ctgccgcaga atggtggcgg gcgtgctgcg gggagcgaac
      181 accttcacct cggcgcccgc tcgtgcggcg taggctgatg ccgcgatgcc ggcgttgccg
      241 gccgtgggca gggtaaaccg ggtgacaccg gcggcgacgg ctcgagtgag cgcggcgctc
      301 aggccgcgcg ccttgaacga cccggtcgga ttggcgcctt cgtcctttac ccagagcccc
      361 ggcaagccca gatcggcgcc gaggcgcggc accttgagca gcggcgtgtc gccttcgccc
      421 agcgacaccg gcggctcccc cccggccagc ggaagaaagg accggtagcg ccacatgcca
      481 tgccggcgcc ggagctcggc ccgttcggtg actggatgga ctcggtcggg gtaccgcacc
      541 agccaggggc gcccgcattc gcagaccgtg ggcacgccct cggggccgcg ggtggcgccg
      601 cattcggagc attcgaggta ccaatcgagg actgcggttg cggcgctcgt catggatggt
      661 ccacgagata ctggtgaata cgagccgcca ttccggtcga cacgccggcg acgtcggcca
      721 gttcggccac ggtggcactg cgaaccccgg ccaggctgcc gaagcgctcc aacaaggcgc
      781 gccgccggtt gggacccacc cccgggatct ccagcaactc cgaggtgagg gtgcgctggg
      841 tcctccggtt ccgattgtag gccaggccga agcggtgcgc ttcgtcccgg atccgctgca
      901 gcaagcgcaa tgagctgctg cggcgtgaca accggaccgg ttcgggccgc ccgggaagaa
      961 agacctcttc gtcccgcttt gccagactga cgatgggcag atcggcctgg tccagggcgc
     1021 gggccgcgtc cagggccgca gagagctgcc ccttcccccc gtcgatcacc atcaggtcgg
     1081 gcaacggcag gtgctcgtcg cagcggcgtt tgagatagcg gctcaccacc tcgtgaatcg
     1141 cggcgaaatc gtcctgctcc gccagtccct tgatgcggaa cttgcgatac tccgacttct
     1201 tgggccggcc ggcttcgaac cagaccagcg agcccaccat gtcgcggccc tggttgtgcg
     1261 agatatcgac gcacaccaga ccgcggggca ccaacgacag gcccaggtcg cggccgagcg
     1321 catagaccgg gtcttcggcc cgctcctcca ccgcgaacga ttccaggcgc aggctctcca
     1381 acaggtggcg ggcgttctga tcggccagct ccaccagccg ccaggcgcgg ccacggcgcg
     1441 ggatgttcac caccgcatcc gggaccagcg tctccagctc cggcaggttg gcgggggcga
     1501 agggaagcat cagccggcgc ccgcgatcct cggccgggac gtagtaccgt acgatgaacg
     1561 cgctcagcac atcctcgtcc cgctcctctt ccagattctc caggaaccgg tggtcgcgag
     1621 ccaccacgcg gccgtctcgc actcgcagaa acaaccccac cgcgtcgtcg ccgtcgcggg
     1681 cgaagccgat cacgtcggca tcaccccgcg tggtgacttc cacctcggac ggcgcctcga
     1741 cctgctccag ccagcgcagg gtgtcgcgca gctcgcgggc ccgttcgaag tcggtctgat
     1801 cgctcgcctg ctgcatcatc tggcgcagcc gggtgcgtac gtcgaccgtg tcgccctcga
     1861 ggaaggacac gacctcagtg atcattccgc ggtagtccgg ctgatcctgc catcccacac
     1921 aaggggcccg gcagcgcccg atgtggtaat cgagacaagg ccggtcgcgc ggctcccggg
     1981 gcagatcgtc ggaacagctg cggaccgtga agatgcggcg tacgatcgcc agcatccgcc
     2041 gcatggcggc cacgtcggtg aaggggccga agtagcgggc cccgggcaga ttgcgccggc
     2101 gggtgaccag cacccgggga aagggctcct ggagcgtgac ggcgatgcag ggatagctct
     2161 tgtcgtcctt gagccggatg ttgaaacggg gctggtgctc cttgatcaga ttgttctcga
     2221 gcagcagcga ctgggcctcg ctcgacacca cgatggtctc gacatcggcg atcagctggc
     2281 gcagccgggc gttcttgacg ctcccgctgt ggtccgatgc caggtagctg cgaacccggg
     2341 aacgcaggct cttggccttc ccgacataca gcaccttccc ctcggcgtct ttccagagat
     2401 agacgccggg accggcgggg agggtcgtga gtttgcgggc gagggcggac actaccagtt
     2461 ccaggttccg ggttccgagt tccacgtgcg gtgctaggtg cggtgccggt gaccggtgcc
     2521 gggtgcggat tcatgagacc agcttcgccc cgatgacaat caggtgcacc tagcacctgc
     2581 cccggggaac cgaaccaggc accgcacgtg gaacacggta cccggaactc ggaacggctt
     2641 caccgcctca acagccccac cgcctggggg atcccgagga gatatgtgat caaaagatag
     2701 accaccccaa aagccccgag gctcacgatc gaacggagga acaggggtga atcggggagc
     2761 agcagcagca ccccccagcc ggccagggca ccgcccccgg ccgccatcca gagcgccgcc
     2821 acgcggcccg gcggaagccg gacttcgccg atccgctgtc gcagcgcgtg ccggagcagc
     2881 ccgaattcca cccaccccgc cagcccggag gcgagtccca gtccggccac gccccacttg
     2941 gggtcgagct gcagcaatcc gggtccgaac caggctgcca ggaagccgaa taccgtggcg
     3001 agggcgaccc gggtcgcggc gcagcggaag ggcgtccggg tgtcgcccaa cgcgaagaag
     3061 gcgcttccga acagccgggc cagggtcgag gccagcagtc ccaccgacgc cagcgccaga
     3121 atgccccaca cgtatcgggc gtccgccgcg ctgaaccgtc cgctctgaaa caccaggccc
     3181 gcgatcatat ggcccagcgc catgaacgcg gcggcgctcg gaatcaccca gaaggccact
     3241 cgttcgccgg cctgccgcag ccgctgccgg agcgccgccg acacttcctc cgcgttaccg
     3301 gtggccgagg ccatggccgg cagctcggcg gccgcgatgg acattccgaa gagactcacc
     3361 ggcaactgat agagcagctg ggcattagtg agcgccgcca ccgccccggt gggcagcaga
     3421 ctggcgatga aggaatccac gaacgcgctc acctgcacca cgcccctcga gagcagcgcc
     3481 ggcgcgaagg cgccgcgcac ctcgcccacc aaagggtcgc cccgccccag gctcaccggc
     3541 ggccgctccg ccagtcgccg cgccagcggc agctgcacca gaacctggag caggctgccg
     3601 gccaccgacg ccccggcggc cgcgaccgtc accccggccg gatccaggcg tggcccggcc
     3661 cagaggaccg tgatgatgat cgcgagattc cacgccaccg gggcggcgta ggagaggaag
     3721 aagcgccggt ggctgttgag aatccccagg caccaggccg aaaacaccag cagccccgcg
     3781 ccgggaaaga gcacccgcac cagcaggacc gtgagagctc gcttttctcc ttcgaacccg
     3841 ggagcgagcc cggcgaccag cagcggcgca ctcagcacgc cggccagcac caccaggctg
     3901 atcaccaggc cgagctggcc cagcaccgcg ccggccacgc gccgggctcc ctccggatcg
     3961 ccggcgccca gtcggcgggc gtagaccgga atgaacgcgg ccgacagcgc gccttcgccg
     4021 aacagattct ggatgatgtt ggggatccgg aaggccgcgg cgaaggcgtc ggcctggtca
     4081 cccagtccga ggtagtgcgc cagcgcgcgc tgccggatca gtcccgccag gcggctcaac
     4141 atgatgccgc ccgcgacgaa cacggcggcg ggacggcgcg cggttttcag ggggtggagc
     4201 ggggtggcag cgactggcgg ccgggcgact cctccaggag ccgctgcagg aactgattct
     4261 cgtctcggag attctcgacc gcgcgggtga ggtcgtcgac ttcggcctcg agcagctcca
     4321 ccttcttgcc caagtcgatg aggttggggg cgacggcctg ttccggccct tcgagccgtc
     4381 gggcgatggc gcggccgatg ggcgagtcca ccacgatccc gaagatcgga atcaggagcg
     4441 ctaccaacat gatgagcccg accagcagga tccccatggc tggtcggagt ctaggacgcc
     4501 ccggcccggg cagcaagggc gccggcgtac cagcccgcag cctctgcccg gacctggtcg
     4561 agcaaggtcg gcccataacg cgccaaccag gcggcgccgg tgagcacccg ttcctgcggc
     4621 tttccgcccg gcgccaccgc cgagcgggcc cgcccgatct gactcagctc ggtcgcttcc
     4681 cgcttcttca ggtgagcttg aatcttcttt tcgatatcgg acaggccggt ctgggcatgg
     4741 tggagggcag ctcccaccgg ccgctccagc gtggggtcga tctggatggc cccgtctaga
     4801 atcgtgtggt actcatggtc catcgcctgc cgcaggcgat ccgcggcggc gatcagcgcg
     4861 gccggcaggt gggaacggat cacccggccc tccagggcgg tgcccggttc cagcaggtcg
     4921 gcaagggtgg cgccgaactt ctcgagcacc cggtcgaccc ggggttcgac gatgatgccg
     4981 gaccagcgcg ggaccggcag ctgggccggc acacccagcc ggtcgtagag cggagtgcac
     5041 tgggcgaagt acgccagctc acccgggccg gccacatagg ccacggtggg cagcaacgcg
     5101 ctctcggtga ccggccggag cagcacgtta ggcgacaggc gctccggcat cgcggccgcg
     5161 atggtctcca gctgcgccag ggtggcgcgg gtcccggacc gccgcgcgac gaagctgccc
     5221 tggtccagca ccagtcggtc gcggcccgct ccgtcctcca gaaacacgag tgtcgcaccg
     5281 tcgcccaccg ggaccgtgat ggggcggccg gccgccgcca gcgccgacgc ctggtcggcc
     5341 agggcccgat ccagctccgc ggcgcggccc agcgcctcca tcaggaccgg gaccatggcc
     5401 gccttggcgc tggggtgggt gctgtcgaag caggcgatgc ccagcggggc gaacagctcg
     5461 gccagcgcac cggcgtaggc cgcgcccagg gttcgcccgg gagcgtaatg acgtcccagc
     5521 caggccaggg tctgctcccg ctggggggac gccggtacgg caccttccag ctgctcgatg
     5581 aggccggtca cttcggccgg caacggcagc cgcgccatcg cggtaagcgg cgcgtcggga
     5641 gctcgatccg gcagagtggc cgtcaccaat tcgccgtggc cgtcgagcca gctggcccag
     5701 cgggcctcgg cataatcgtg atcgtccccg gcggcccaga acaccggcac caccggccgg
     5761 ccccagcggt gctccagctc ctgggcgatg gccgaagcgg agagcgcctt gtacagggtg
     5821 tacagcggtc cggtgaagag ccccggctgc tggccggtgg tgaccaccac cacggcggga
     5881 tcgcgcagcc ggctgcgaat ggcctccacc cccggggccg cgaccaatgc cgcgagcagc
     5941 gactccgcca cgccaccgga gcgggacagt ggcggaagcg ggacggacgg ggccagcggg
     6001 gtggtgacga tgcgcatgaa ccggattcga ggcggctaac agtgaacagt gaacagtgaa
     6061 caacaaacgg tgaacagtga acggtgaacg gtgaacggtg aacagggaat aattcgcggt
     6121 ccctgcgtcc actgtttact gtttaccgtt caccgtgcct tgtggtactt ctcccccgcc
     6181 aagatggtga agccacgata gatctgttct agcacgacga ctcgcgccag ctcgtgcggc
     6241 agggtcaacg ggctcaggct ccagcgctgg gtcgcctgct cgagcaggtc gccggcaagc
     6301 ccctcggcgc cgccgatcag gaaagccact ggtctcgagc catcgcgcca gcgccccagc
     6361 cggcgagcca gatcggcgct gctccagccg tctccctcgc gggtgagcgc gatcaccacc
     6421 gcatcggccg ggagcgcacc cagcagacgg gcagcttcct cccgccgctg ggcggtggcg
     6481 ttgcccgcct tccccgcctc agggagctcc ctttcctcga cccgaacgta gcgcccgagc
     6541 cggcggaggt actcgtccgc caccacgcgc agcgcgggtc tgagtttccc gatggccagg
     6601 atatgcaccg agcccaccgc ccgtcagtcc gtccctccgc ctgtccgcct gtccgcccgt
     6661 ccgcccgccc gtccgtccgc cagtccgtcc gccagtccgt ccgtccgtca ggcatacagt
     6721 ccgcgcagcc ggtgcacttc ggccacccgg tcgatcgcca gcatgtagga ggcggcccgc
     6781 atgctcacgt gatgcttgtc cgacatcgac gcgacctggt cgaacgactg ctccatgatc
     6841 cgttccagcc gctggttgac cgtgtcctca tcccagaagt agcccccccg gtcctggacc
     6901 cattcgaaat agctgacggt cacgccaccc gcgttggcca ggatatcggg gatgacgaag
     6961 atcccgttgg attcgagaat ggggtcggcc gcggcggccg tgggaccgtt ggctccttca
     7021 caaatcacgc gggccttgat ctgggccgcg ttgtcggccg taatctggtt ctccagcgcc
     7081 gcggggacca gcacctcgca atcgcactgc agcagctcgg cattggtgat ccggtctccc
     7141 gagggatatc cgtcgagggt ccgatgctgg gcggtccagg ccatcgtctc cttcacatcg
     7201 agtccccggg gattgtaaac agcgccgctg tggtcgctca ccccgatcac cttcatgccc
     7261 tgctcttcca tcagcattgc ggttatggat ccgacgttgc cgaatccctg aaccgcgacc
     7321 cgcgccccct g
//
LOCUS       DASWKS010000163         7588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2669860, whole genome shotgun sequence.
ACCESSION   DASWKS010000163 DASWKS010000000
VERSION     DASWKS010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7588
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2669860"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..880)
                     /locus_tag="VGA78_04855"
     CDS             complement(<1..880)
                     /locus_tag="VGA78_04855"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX9893227.1"
                     /translation="MRPLTLALLMSLAVPARGTADQADSLALLERARRLHREVPAIDT
                     HNDLPTMIHSRAAGDLRKMDPNGRLDIDTDLPRLRQGLIGAQFWAAYAPSSYIDKGAA
                     RYTLEEIDIIKRFTAKSPVLEFATTAADIERIFAKGKTASLIGIEGGHAIENSLGTLR
                     MFYELGVRYMTLTHSGTTPWADAATDAPKHGGLSAFGEEVVREMNRLGMMVDISHVSD
                     ATMLDALRVSAAPIIYSHSSARALANHVRNVPDSILALIPKNGGVVMVNIFPGFINAT
                     AAKQTATILDKEREFNR"
     gene            1043..1453
                     /locus_tag="VGA78_04860"
     CDS             1043..1453
                     /locus_tag="VGA78_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893228.1"
                     /translation="MPVTYQIDPTRALIRTRCAEVVTLKEVLEHFFALTNDPACPAQL
                     DVLLDLTQLTTIPDSGQIRVAAGEVGRVRSRVQFVHCAIVANREAVVSVGLIFKTFAK
                     QHFQEATVFSAVEEAEAWLAGTLSLDATEPGIWI"
     gene            1502..3118
                     /locus_tag="VGA78_04865"
     CDS             1502..3118
                     /locus_tag="VGA78_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893229.1"
                     /translation="MRPFHSLIALVAVLPGPIVSAQEHAHQGTEQLGRVVFPVSCSSE
                     AQRRFERAMAVLHSFWWEQGDNAFRAVLAADSSCAMAWWGLAMNSWGNPFAGGPSGEA
                     LAKGREAAERARMMGGKTSREAGFIAAGGALYHDASSSSSAARLRAYSDTLARVHQAH
                     PDDEEVAIYYALSLVATAPPTDTTYARQKQAAALLNPLFVRHADHPGLAHYIIHANDS
                     PKLAHLGLDAARRYARIAPSAPHAQHMPSHIFVRLGMWDETIASNRKAFEAGVAYARA
                     QRLRGVQGEQLHALDYAVYSYLQQGRDRDARQAVQTADSLSTAALMATVVGGYNRTAM
                     ALRIPLERGEWERAAAVPPPGPSALPMAAMLVRFARGIGSARSGKVALGRAEVAALDS
                     ITKVFASRSEPDWARISDIKRQAVEAWVRFAAGDTTGGLTLAHAAAELEDVTEKKAVT
                     PGELLPARELEADMHLAAGHFAAGRAAYLKTLDREPGRARSVFGAARAAELAGDRAAA
                     AAGYGQFLELMQQGDGDRAEITAARKFVAR"
     gene            3180..6272
                     /locus_tag="VGA78_04870"
     CDS             3180..6272
                     /locus_tag="VGA78_04870"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9893230.1"
                     /translation="MERLRTSLAGRYRIDRELGGGGMSRVFLVEELALGRLVVLKVLP
                     PEIAEILSADRFTREVRVAARLQHPHIVPLLASGEAGGLLFYTMPLIEGESLGAKLAR
                     EGALPIDEAVRLLRDVADALAGAHAHGVVHRDIKPDNILISQGHAVVTDFGIAKAFTD
                     AGGTDALTATGIVLGTPSYMAPEQASADPHVDHRADLYALGVVAYEMLAGRPPFAGPT
                     AQAVIAAHVTRPARPLSEVRTSVPPPLATLVMRLLEKQPPDRVQSAQEVVRALAAQYT
                     PTEATPVASSVRRWPPAQVIGLYLLATALVLGAAWALRTLVGMPDWFLPSAVALLCIG
                     LPVILVTAVLHNQRVADPRAVPAGLHHALFTWRRALGGGAAALSALVALAGGYLALRA
                     AGVGPVGTLIAKGRLAAREPILVADFVNRTSDSMLGGVVTQALRIDLAQSRSIALVPT
                     DYVRQVLRLMARPPASSLDPELAREVAARGRIKAVLRGEIQEAGAGFMLSAELLSAET
                     GEALVTHREEARDSSEILKAVGGLSKRLRERIGESLRSLEETPRLEQVTTPSLEALRK
                     YSQGIQAEESGRFDQAVRLLEEAVAIDSGFAMAWRKLGTVLLNQRINRDLQISATARA
                     FALRDRLTERERRLTEASYYSIVKAHEDSAIISLERLLDAWPNDSWALNNLGVYRSWA
                     GDYRAAIPYYRQAATAEPLNNLAWGNLVTSLLSVGLLDSARAAALDFRRMLPGHADLP
                     RLDLALVLAGGDFGEGERLVRSYLQTDAADPRAQIRWKHTLAGILQIRGKVAEADRTL
                     EQVEAAWRQAGNRDLAMESLVRRVYLRGRYHPWPETARPLLREGLTRLALPPEYASGI
                     QYWQLAMASARAGDIEGGNGFLALAERQVRESPARGPRMLTAWARAEIAEAAGRGVET
                     ALDSLRVALNSPCPDCVHASIAVLFDRLGQRDSAIVHYQMFAKSLDAAWFYGLYRIDR
                     PHVYHRLGELYEWKGDRARALEVYQKFVDLWKEADPELQPRVREARRRIADLAKEPRT
                     "
     gene            complement(6336..6719)
                     /locus_tag="VGA78_04875"
     CDS             complement(6336..6719)
                     /locus_tag="VGA78_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEX9893231.1"
                     /translation="MSFRFWLTTGALLAAAAVAAGAFGAHALRDRLSPGDLATFETAA
                     RYQMYHALGLVAVALLSARGTAGVNPAGWCFLAGIALFSGSLYLLTLAGLRWMGAITP
                     LGGVAFIVGWFLLAVAGWRAGGLAA"
     gene            complement(6722..>7588)
                     /locus_tag="VGA78_04880"
     CDS             complement(6722..>7588)
                     /locus_tag="VGA78_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEX9893232.1"
                     /translation="VADDAGFGFAIARALAEAGASVCLGTWPPALGIFEKLLERGKMS
                     DSMHLSDGRSLEFERIYPLDAAFDRMADAPAEILENKRYKERGDFSITGVTERLRADF
                     GEQGLDIVVHSLANGPEVKLPLLETSRRGYLDAVSVSAYSNVSLIRSLGPMLRPGGSF
                     LSLTYMASERAIPGYGGGMSSAKAALESDTRTLAMEVGRKWGHRVNTISAGPLASRAA
                     SAIGKIDRMIEYCRANAPIDRPLDAMDVGYAAAFLASPLAAAITATTIYVDNGYHSMG
                     MGIEQPVLQGSD"
BASE COUNT         1198 a         2539 c         2610 g         1241 t
ORIGIN      
        1 ggcggttgaa ttcccgctct ttgtcgagga tagtcgcggt ctgcttcgcg gcggtggcgt
       61 tgatgaaccc ggggaagatg ttcaccatca ccaccccgcc gttcttcgga atcagcgcca
      121 gaatgctgtc gggcacgttg cgcacgtgat tcgccagcgc ccgggccgag gagtggctgt
      181 agatgatcgg tgccgcgctc acccggagcg cgtccagcat ggtggcgtcc gagacgtggg
      241 agatgtccac catcatcccc agccggttca tctcccgcac cacctcctca ccgaaggccg
      301 acaggccgcc gtgcttgggg gcgtcggtgg cggcatcggc ccacggggtg gtgccgctat
      361 gggtcagcgt catgtaccgc acgcccagct cgtagaacat ccggagcgtg ccgagggagt
      421 tctcgatggc gtggccgcct tcgatcccga tcagcgaggc ggtcttgccc ttggcgaaga
      481 tccgttcgat gtcggccgcg gtggtggcga actcgaggac gggggacttg gccgtgaacc
      541 gcttgatgat gtcgatctcc tccagcgtgt aacgcgcggc gcccttgtcg atatatgaag
      601 agggcgcata tgccgcccag aactgggcgc cgatgagtcc ttgccgcagc cggggaaggt
      661 cggtgtcgat gtcgagccgg ccgttcgggt ccatcttgcg gaggtccccg gccgcccggc
      721 tgtggatcat ggtgggcagg tcgttgtggg tatcgatggc cggcacctcg cgatgcagcc
      781 ggcgggcccg ttccagcagg gcgagggaat cggcctgatc tgccgttccc cgagccggaa
      841 cggccaggga catcagcagg gctagggtca atggtcgcat gaaatgcctc gggttacagg
      901 aagcagggag cagggagcgg ggagcaggaa cagggaccag gcgtacatga tcatcatccg
      961 gggcggcatc cagcacaact cctgcggatt ccgcttggga cccctagatt aggtcggtgg
     1021 accactccag ggcggcggct tcatgccggt tacctaccag attgatccga cccgggctct
     1081 tatccgcacc cgctgcgccg aggtggtcac gctcaaggaa gtcctggagc acttcttcgc
     1141 gctgaccaac gacccggcct gtcccgccca gctggacgtg ctgctcgatc tgactcagtt
     1201 gaccacgatc cctgacagcg gtcagatccg ggtggcggcg ggagaagtcg gccgggtccg
     1261 aagccgggtc caattcgttc actgcgccat cgtcgccaac cgtgaggcgg tggtcagcgt
     1321 gggactcatt ttcaagactt tcgcgaagca acactttcag gaggccaccg tgttcagcgc
     1381 ggtcgaggag gccgaggcct ggctggcggg aactttgagt ctcgacgcca ccgagcccgg
     1441 catctggatc tagctgagca cctggcagca acgccccagt gtcatcgcgg tgaggtaagc
     1501 catgcggccc ttccattctc tgatcgcgct ggtcgccgtg ctccccggcc ctattgtgag
     1561 cgcccaggaa cacgcccacc agggaaccga acaactgggc cgggtggtgt tcccggtgtc
     1621 gtgcagcagc gaggcccagc gccgcttcga gcgtgccatg gcggtcctgc actccttctg
     1681 gtgggagcag ggcgacaacg cattccgtgc tgtgctggca gccgattcat cctgcgccat
     1741 ggcctggtgg ggcctggcca tgaactcgtg gggtaacccc ttcgccggtg gtccttcagg
     1801 tgaggcgctc gccaaaggca gggaagcagc ggagcgggcc cggatgatgg gtggcaagac
     1861 ctctcgggag gcgggattca tcgcagcagg aggcgcgctc taccatgacg cgtccagcag
     1921 ctccagcgcg gctcgtctcc gggcctattc cgacacgttg gcccgggtcc atcaggccca
     1981 ccctgatgac gaggaggtag ccatctacta tgccttgtca ttggtggcca ccgctccccc
     2041 aaccgatacg acctacgccc ggcagaaaca ggcagccgca ctgctgaacc cgcttttcgt
     2101 ccggcacgcc gatcacccgg gcctggccca ctacatcatc cacgccaacg actcacccaa
     2161 gctggcgcac ctggggttgg acgccgcgcg tcggtacgcc cggatcgcgc cctcggcgcc
     2221 ccacgcccag cacatgccgt cgcacatctt cgtgcggctg ggaatgtggg acgagaccat
     2281 cgcgtccaac cggaaggcct tcgaggccgg ggtagcctat gcccgggcgc agcgcctgcg
     2341 cggggtccag ggggagcagc ttcacgcgct cgactatgcg gtgtacagct acctccagca
     2401 gggaagggac cgggacgccc gtcaggccgt gcagacggcc gacagcctca gcaccgccgc
     2461 gctcatggcc acggtcgtgg gcggctacaa ccggaccgcg atggcgctcc gcattcccct
     2521 cgagcgaggc gaatgggagc gtgcggccgc tgtcccgccc cccggcccgt cggcgctgcc
     2581 gatggccgcc atgctggtcc gcttcgcccg cgggatcggc tcggcccgca gcgggaaggt
     2641 ggctctggga cgcgctgagg tggccgcgct ggactccatc accaaggtgt ttgcctcccg
     2701 gtccgagccc gactgggccc ggatctcgga catcaagcgg caggccgtgg aggcctgggt
     2761 caggttcgcg gcgggtgaca ccacgggcgg actgacgctg gcacacgcgg cggctgagct
     2821 agaggatgtc acggagaaga aggcggtcac gcctggtgag ctgctgccgg ctcgcgagct
     2881 cgaggccgac atgcatctgg ccgccggcca ctttgcagcg ggccgcgcag cctacctcaa
     2941 gacgctcgac cgcgagccgg gtcgggcccg gagcgtcttc ggcgccgccc gcgcggcgga
     3001 gttggccgga gaccgcgccg ccgccgcagc cggttacggc cagttcctcg agttgatgca
     3061 gcaaggggac ggagatcggg ccgaaatcac tgccgcccgg aagttcgtcg cccggtgagt
     3121 ggccaactgg ggaatctcgg gaggaatatc tggcgatagt cggaccccag cccgacctga
     3181 tggagcggct tcgcacctcc ctggccggcc gctaccggat cgaccgcgag ctgggcggag
     3241 gcggcatgag ccgcgtcttc ctggttgagg agctggcact cggccggctg gtggttctca
     3301 aggtcctgcc ccccgaaatc gcggagatcc tgagtgcgga ccgcttcacc cgcgaggtgc
     3361 gggtcgcggc ccggctgcag catcctcata tcgtgccgtt gctggcctcg ggtgaggccg
     3421 gcggcctgct gttctacacc atgccgctga tcgaggggga gtcgctcggc gccaagctgg
     3481 cccgggaagg cgcgctgccg atcgacgagg cggtgcggtt gctgcgcgat gtggccgatg
     3541 cgctggccgg ggctcacgcc cacggcgtcg tccatcgcga catcaagccc gacaacattc
     3601 tgatctcaca ggggcatgcg gtcgtcactg atttcgggat tgccaaggcg ttcaccgatg
     3661 cgggcgggac cgacgccctg accgccaccg gcatcgtgct cggcacgccg tcctacatgg
     3721 ccccggaaca ggccagcgcc gatccccacg tggaccaccg ggccgacctc tatgctctcg
     3781 gggtggtggc ctacgagatg ctggcggggc ggccaccctt tgccggtccg accgcgcagg
     3841 cggtgatcgc tgcccacgtc acccggccgg cccggccgct ctcggaggtc aggacctcgg
     3901 tccccccgcc cctggcgacg ctggtgatgc ggttgttgga gaaacagccg cccgaccggg
     3961 tccagtcggc ccaggaagtg gtgcgggcgc tcgctgccca gtacacgccg accgaagcca
     4021 cgcccgtagc ctcatcggtc cgccgctggc ccccggccca ggtgatcggg ctctatctgc
     4081 tcgccaccgc tctggtgcta ggcgcggcct gggctctcag gacccttgtc ggcatgcccg
     4141 actggttcct tcccagcgcg gtggcactgc tgtgcattgg gctgccggtc atcctggtca
     4201 ccgccgtcct ccacaaccag cgggtcgccg atccgagggc cgtgcccgcc ggactgcatc
     4261 acgcgctctt cacctggcgc cgggctctcg gcggcggcgc ggcggccttg agcgcactcg
     4321 tcgccttggc cggagggtac ttggcgctcc gagctgccgg tgttggtccg gtgggcacgc
     4381 tgatcgcgaa agggcgactg gccgcccgcg agccgatcct ggtggccgat ttcgtgaacc
     4441 gtaccagcga cagcatgttg ggcggagtcg tgacccaggc gctccgaatc gacctggctc
     4501 agtcgcgttc gatcgcgctg gttcctaccg attacgtgcg tcaggttctc cggcttatgg
     4561 cccgtccgcc tgcgagcagc ctcgatcccg agctggcccg cgaggtcgcc gcccggggca
     4621 gaatcaaggc ggtcctccgg ggcgagatcc aggaagccgg tgccggcttc atgctctcgg
     4681 ccgagctgct gagcgccgaa accggcgagg cgttggtgac ccaccgcgag gaagcccgtg
     4741 attccagcga gatcctcaag gcggtcgggg gactgtccaa gcggctgcgg gagcggatcg
     4801 gggagtcgct gcgctcgctg gaggaaacgc ctcggttgga gcaggtgact actccttcgc
     4861 tcgaggcact gcggaagtac tcccagggca tccaggccga ggaaagcggc cgctttgatc
     4921 aggcggtccg tctgctggaa gaggcggtgg cgatcgacag cggttttgca atggcctggc
     4981 gcaagctggg cacggtactc ttgaatcagc gtatcaaccg cgacctgcaa atcagtgcga
     5041 ccgccagggc ttttgcatta cgggaccggc tcaccgagcg ggagcgccgg ctgaccgagg
     5101 cctcgtatta ctccattgtc aaggcacacg aagactcggc gatcatcagc ctggagcgat
     5161 tgctcgatgc ctggccgaac gattcctggg cgctcaacaa tctcggggtc tatcgctcct
     5221 gggccggcga ttatcgtgcc gccatcccgt actaccggca ggcggcgacg gccgaaccgc
     5281 tcaataatct tgcgtggggc aacctggtca cgagcttgct ctcggtcggt ctgctcgatt
     5341 cagccagggc cgcggctctg gacttccgcc gaatgctccc cggccacgcc gacctaccgc
     5401 gactcgatct ggcactggtg ttggcaggcg gggatttcgg cgaaggcgaa cggctggttc
     5461 gaagttatct ccaaaccgac gccgccgatc cgcgggcgca gatccggtgg aagcacacgc
     5521 tcgccggcat tcttcaaatc cggggcaagg tggccgaagc ggatcggacc ctggagcagg
     5581 tggaagcggc gtggcggcag gccgggaacc gggacctagc tatggaatcc ctggtccgtc
     5641 gggtctacct gcgaggccgc tatcatccgt ggcccgaaac cgcccggccg ctcctgcgcg
     5701 aagggctgac tcggctggct ctcccgccgg agtacgcctc cgggattcag tactggcagc
     5761 tggcgatggc ctccgcccga gccggggaca tcgagggagg gaatggcttc ctggcgctgg
     5821 cggaacgcca ggttcgggaa tcaccggccc gcgggccgcg gatgctgacg gcgtgggccc
     5881 gggccgaaat cgcggaagcg gccggccgcg gggtggaaac ggcgttggat tccctgcgtg
     5941 ttgcgctcaa ctctccctgc ccggactgtg tccacgcatc catcgctgtc ctcttcgacc
     6001 gtctcggcca gcgcgactcg gctattgtcc actatcaaat gtttgcgaaa agtctggatg
     6061 cagcgtggtt ttacgggctg taccggatcg accggcccca cgtgtaccac cgactgggcg
     6121 agctctacga atggaagggc gatcgagctc gcgcgctcga ggtctaccag aagttcgtgg
     6181 acctctggaa ggaagccgat cccgagctgc agccgcgggt gcgggaggcg cgaagacgga
     6241 tcgcggacct ggcgaaggaa ccgagaacct agtcgagatt cttcgcttcg ctcagaatga
     6301 caccgggtcc gtcggtccgt cggtccgtcg gtcagtcagg ccgccagtcc gcccgcccgc
     6361 cagcccgcca ctgccagcag aaaccagccg acgatgaatg ccacaccgcc taacggcgta
     6421 atggctccca tccagcggag accggccagc gtcagcaaat agaggctgcc ggagaacagc
     6481 gcgattcctg ccagaaagca ccaccccgcg ggattgaccc cggccgtgcc gcgggcggag
     6541 agcaaggcca ccgcaacgag tccgagcgcg tggtacatct ggtagcgggc cgcggtttcg
     6601 aaggtggcga ggtccccggg cgagagccgg tctcgcagcg cgtgggcccc gaaggcgccc
     6661 gccgccaccg ccgcggcggc cagcagggcg ccggtggtca gccagaaccg gaacgacacg
     6721 atcagtcgct gccctggagc accggctgct cgatccccat gcccatgctg tggtagccgt
     6781 tgtcgacgta gatggtggtg gcggtgatgg ccgcggccag cgggctcgcg aggaacgcgg
     6841 cggcgtatcc tacatccatc gcgtccagcg ggcgatcgat cggcgcgttg gcccggcaat
     6901 actcgatcat ccggtcgatc ttgccgatgg cgctggcggc gcgggaggcc agcggtcccg
     6961 ccgagatggt gttgacccga tggccccact tgcggcccac ctccattgcc agagtgcggg
     7021 tatcggattc gagcgccgcc ttggcggacg acatgccgcc cccataaccg gggatcgccc
     7081 gttcgctcgc catgtaggtg agcgagagaa aactgccgcc cggtcgcagc atcgggccca
     7141 ggctccggat cagcgagacg ttggagtagg cgctcacgct gaccgcgtcg agataacccc
     7201 gccggctggt ctcgagcagc ggcagcttca cctcgggtcc gttggcgagg ctgtgcacca
     7261 cgatgtcaag cccctgctcg ccgaagtccg cccgcagccg ctccgtcacc cccgtgatcg
     7321 agaaatcgcc ccgctccttg tagcgcttgt tctcgagaat ctcggccggc gcgtcggcca
     7381 tccggtcgaa ggcggcatcg agcggataga tccgctcgaa ctccaggctg cggccgtcgg
     7441 agaggtgcat cgagtcggac atcttgcccc gctccagcag cttctcgaag atgccgaggg
     7501 ccgggggcca ggtgccgagg cagaccgagg ccccggcctc ggccagagcc ctggcgatgg
     7561 cgaacccgaa gcccgcgtcg tcggccac
//
LOCUS       DASWKS010000164         2289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2309367, whole genome shotgun sequence.
ACCESSION   DASWKS010000164 DASWKS010000000
VERSION     DASWKS010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309367"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..759)
                     /locus_tag="VGA78_04885"
     CDS             complement(4..759)
                     /locus_tag="VGA78_04885"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9893233.1"
                     /translation="MIELHGVRKRFGEQVVLDGVDFTVREGETVALLGPSGTGKSVLL
                     KHVIGLIRPDAGKIVVDGQDVGQLSRAQLTALRTQIGYVFQNGALFDSMDVFENIRLG
                     ITDQKLYKDMAYAGERVTQCLRQVNLQPDQVLKKLPAELSGGMRKRVGIARAIAGKPK
                     YLLYDEPTSGLDPVNADIIDDLVRQLDNELGVTSVMVTHDVRGAFRVADKLALLSDGK
                     IVLQGSQEEFLASDNEKVRAFLERDFDNRPAAA"
     gene            complement(756..1562)
                     /locus_tag="VGA78_04890"
     CDS             complement(756..1562)
                     /locus_tag="VGA78_04890"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893234.1"
                     /translation="MGDQDRAVEVLMRPVRLLGRLILAGLAHVGRFSLMILEVIRGLR
                     EWRIWVPRTFTEAYNIGVGSLFIVLLIAAFAGAVTAFQAGYQWQTSLPVYVLGTLIVS
                     TIVLELGPVLIGLVLAGRIGARYAAELGTMRVTEQIDALESLGRSPASHLIVPKVLAG
                     FVMIPVLTVIADLVAVLAGWYGVKQVLPITDADFAYGAQSYYRPFDGIYSVIKAFFFG
                     GAIGLIACYVGFNTKQGAEGVGRATTAAVVTSSVVILLLNVLLARILLNA"
     gene            1561..2253
                     /locus_tag="VGA78_04895"
     CDS             1561..2253
                     /locus_tag="VGA78_04895"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000701 - purine-specific mismatch base
                     pair DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEX9893235.1"
                     /translation="MGGKSSETGVPSRAAQERTFRTRLLRWFDKHGRDLPWRRTRDPY
                     RVLVSEVMLQQTQVSRVEAYYARFLKAFPTLDHLAAATPRTVREQWDGLGYYRRAGNL
                     HRLARQVVALHDGIIPDDLDRLRALPGVGRYTAGAVLSFAYERRAPAVDTNVGRVIRR
                     AFHPRARHNARGDRTVWNTAARLIPKSRKRVWAFNQAVMELGALICTSRIARCDQCPV
                     RAACATGRRKDV"
BASE COUNT          393 a          768 c          748 g          380 t
ORIGIN      
        1 cgctcaggcc gccgcgggcc ggttgtcgaa gtcccgctcg aggaaggccc ggactttctc
       61 gttatccgag gcgaggaatt cttcctggct gccctgcagg acgatcttgc cgtccgacag
      121 cagggccagc ttgtcggcca cgcgaaaggc gccccggaca tcgtgcgtca ccatcacgct
      181 ggtgacaccc agctcgttgt cgagctgcct gaccaggtca tcgatgatgt cggcgttgac
      241 cggatcgagc ccgctggtgg gctcgtcgta gaggagatac ttgggcttcc ccgcaatggc
      301 ccgggcgatc ccgacccgtt tccgcatgcc gcccgacagc tccgccggga gcttcttcag
      361 cacctggtcg ggttgcaagt tcacctgcct gagacactgg gtgacccgct cgccggcgta
      421 ggccatgtcc ttgtagagct tctgatcggt gatgcccagc cggatgttct cgaacacgtc
      481 catcgagtcg aacagcgcgc cgttctgaaa gacgtacccg atctgggtcc gcaacgcggt
      541 gagctgggcc cggctcagtt gccccacgtc ctgtccgtcc actacgatct tacccgcgtc
      601 gggccggatg agcccgataa catgcttgag cagcacgctc ttgccggtcc cggacggccc
      661 caacagggcc acggtctcgc cttcgcggac cgtgaagtcc acgccgtcga gcaccacttg
      721 ctcgccgaac cgcttccgga cgccgtggag ctcgatcatg cgttgaggag aatccgggcc
      781 agcaagacgt tgaggaggag aatcaccacc gagctggtga ccaccgccgc ggtcgtggcc
      841 cggcccactc cttccgctcc ctgcttggta ttgaagccga cgtagcaggc gatgagaccg
      901 atcgccccac cgaagaagaa cgccttgatc accgagtaga tcccgtcgaa ggggcggtag
      961 taggactgcg ctccgtaggc gaagtcggcg tcggtgatcg ggagtacctg tttgacgccg
     1021 taccagccgg ccaggaccgc caccaggtcg gcgatgacgg tcagcaccgg gatcatcacg
     1081 aagccggcga gaaccttggg cacgatcagg tgcgaggccg gcgaccggcc caggctctcg
     1141 agcgcgtcga tctgctcggt cacccgcatg gtcccgagct cggccgcgta gcgggccccg
     1201 atccggcccg cgagaaccag cccgatcaga accggtccca gctccaacac gatggtcgag
     1261 acgatgaggg tgccgagcac gtagaccggc aggctggtct gccactggta ccccgcctgg
     1321 aaggcggtga ccgccccggc gaaggcggcg atcagcagca cgatgaaaag gctgccgacc
     1381 ccgatgttgt acgcctcggt gaaggtccgc gggacccaga tgcgccactc gcgcaggccc
     1441 cggatcacct cgaggatcat caggctgaaa cggcccacgt gggccagccc cgcgagaatg
     1501 aggcggccca acaggcgcac cggacgcatc aggacttcca cggctctatc ttggtcgccc
     1561 atgggcggga aatctagcga gacgggagtc cccagtcgcg cggcgcagga acggacgttc
     1621 cggacccggc tgttgcgctg gttcgacaaa cacggccgcg atctgccgtg gcgccggacc
     1681 cgcgaccctt accgggtact ggtttcggag gtcatgctgc aacagaccca ggtgtcccga
     1741 gtcgaggcct actatgcccg ttttctgaag gctttcccca ccctggatca cctcgcggcc
     1801 gcgacgcccc gcaccgtgcg cgagcaatgg gacgggctgg gctactatcg ccgggccggc
     1861 aacctccacc gcctggctcg ccaggtagtg gccctccacg acgggatcat tcccgatgac
     1921 ctcgatcgac tgcgcgcctt gcccggggtg ggacgctaca ccgccggtgc ggtgctctcg
     1981 ttcgcctacg agcggcgcgc tcctgccgtc gataccaatg tcggccgggt catccggcgc
     2041 gcgtttcatc cgcgggcgag gcacaacgcg aggggcgacc ggaccgtgtg gaataccgcg
     2101 gcccgactga taccgaagag tcgaaagcgg gtctgggcgt tcaatcaggc ggtgatggag
     2161 ctgggggccc tcatctgcac ttcgcggatc gcgcgctgcg atcaatgtcc ggtgcgcgcg
     2221 gcgtgtgcga ccggacgcag gaaagatgtt tagcgcttga gcgatttgac ggtttagcga
     2281 ttttacggc
//
LOCUS       DASWKS010000165        15241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2671854, whole genome shotgun sequence.
ACCESSION   DASWKS010000165 DASWKS010000000
VERSION     DASWKS010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671854"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            531..1031
                     /locus_tag="VGA78_04900"
     CDS             531..1031
                     /locus_tag="VGA78_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893236.1"
                     /translation="MSNLWIGYVSTAITGILIVTALAEWQVTGRSRQTMWLALILYVI
                     MWGTTMLFEETARFSLLAVPIHSVLVLLLSLWTLMSNALKDRPQPTYRYDWFWACLGL
                     ALLYGASSAMQPLLRILIAEGQMNDAIAVLNFKAGFQVVAMLFITAGMLCPVQAHSGF
                     SSLPVR"
     gene            983..1741
                     /locus_tag="VGA78_04905"
     CDS             983..1741
                     /locus_tag="VGA78_04905"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX9893237.1"
                     /translation="MSGSGALWVFFVTGALSVTIVLGTMGTLLVLSQRKTLALHRRYA
                     QDLLRAQEEERAWIAREVHDDAVQRLAVIANELSSILPAAVSGGQANRIDGIVGEVQD
                     LGISLRKLAHGLHPSAIDKGGIVPALEQLAADVGSGLGLDVRITIEQPPAGLSRDSEL
                     ALYRIAQESLRNVARHAGVRQATLRLGRHNGRVVLEVADQGSGISRNGPAGIGLMSMR
                     ERARLAGGTLSISSRPGLGTTITATLPGPGPSDA"
     gene            1734..2387
                     /locus_tag="VGA78_04910"
     CDS             1734..2387
                     /locus_tag="VGA78_04910"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9893238.1"
                     /translation="MPKPRLLIADDHEMVSQGLKALLGDTYNIVGAVRDGREVIDAVG
                     RYRPDVLLLDLSLPNRTGIDLIPEIRALHESTRILVVTMHVDAVLAGLAMRLGAHGFV
                     PKDSGVQELNEAIAEVLAGRTYVSPRIPIHTHKGSWGGTHMGFGQLTPRQQAIVRLTG
                     RGRNSEEIAEAIGISVHTVHFHRRNIRRVLGLHSEAEFMRYALMVQLSAEAGGSGSS"
     gene            2394..3566
                     /locus_tag="VGA78_04915"
     CDS             2394..3566
                     /locus_tag="VGA78_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893239.1"
                     /translation="MTIPSYLRSVTVALVAGCGNAEAPALGTPTSDTLAGGIVRVRND
                     VPMGWRNGSAAWQVTEELRISGDEGTESEIINPQSLALDASGRVWVADQSPARLKLYG
                     RDGRLVRVVAREGEGPGEFRVGFIVPAGTYLVLHDPQQSRTSVFDSAGTFLRSFPSQC
                     CYHMAIGADPEGGVLIAGMAAGEERRGQAWYRYSLEGKLLDTTFVPRLTEDKFWTVGD
                     PKRMMMNLAIPFTPRIEAVSHPAGGFLLGHSGTYQLARIRQAGDTALLFGRSWTPQPV
                     TDQDRRDIIERMIPTFDQFDEATLRRAFHAEDIPAVRPAFSSLWVDQEGYSWVLRDSV
                     EFDVFDPAGGWLGELIISPSLSTGTAFFGRARITSSVEQSDGRPVVVVWRVDKLQR"
     gene            3682..4956
                     /locus_tag="VGA78_04920"
     CDS             3682..4956
                     /locus_tag="VGA78_04920"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9893240.1"
                     /translation="MPVFLAAPALAQAPPEVTLSDAVALAARTDPNVVQARGNVHTTG
                     IGVRAARSRFLPSLSFGGSGGSSFSEGPERFDPITNQLISGNSQNQAVNFGFNTEVEL
                     FTGFRRGGAIKEAQGREAVADASLVEALSTSALQTSNDFFSARQGRELVEARRRSVAR
                     AEIQLQIAIARLQTRAATVSDSLRAVVQLGEARLSLATEEAQLARSEASLARRLGLSG
                     RIAAAADSALTAPGPALDTTAIRAEALSRAPAVRRTEASVQAALGSVSAAKADWWPQL
                     SLGASYNYNGSNATSYELFNSRNATISLRWPLFNRFQREQQIAQSQASVDTERARYED
                     ARRLVESDLTTQFAALDAAQQRIDLAQLSVRAAQADVAVAVERYRLGSINITELNAAE
                     SGLTRAEESAVTARFDYLRAKAQIEAILGRRV"
     gene            4977..6101
                     /locus_tag="VGA78_04925"
     CDS             4977..6101
                     /locus_tag="VGA78_04925"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9893241.1"
                     /translation="MPRAKGAVLGAVLGAVLGAGCKGGSASGGSDSTATADSVATPSA
                     LTLPVVGEEVRRGDLVLTVSTTGQIRSEAVVPLKVEATGTVLEVLARPGDRIRKNQPI
                     VKLDPRPFEISLQEAEAALREAQLRLLDNTLPDSLVSGKSVTGERLRNAEVRSGVEAA
                     RVRLERAKYERDRAVIAAPFDGTLDDLRVSLGERVSVGQEIGKLVDLQNLRIDAAVLE
                     HDLSLVRVGGEALITTASAPDRPVRGRIAALLPLVDSTTRAGRALIRVQGNGVLRPGM
                     YADVRLEATRLTNRIIVPERAVIQRDGRPLVFVVRDGRAQWTYILPGRSNGLETEVLP
                     DSSTGQIPLNPGDMVLVEGHLTLTHDAPVRVVPRAERRTP"
     gene            6230..9352
                     /locus_tag="VGA78_04930"
     CDS             6230..9352
                     /locus_tag="VGA78_04930"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9893242.1"
                     /translation="MSFAAAALKRPVTTVAATLAAVLLGAVSLSRLPVSLLPDITLPV
                     LTVRTLYPGAAATEASRMVAEPIEQAVASTPGLVELRSVSRNGEVTTTLRFGWGTDMA
                     QTVLLVRERLDNARPQLPERAERPTLLTSDPGERPIAVLALSGPGDLQSISRTAEDVH
                     ARRLEQLAGVASVAVAGKPEEEIRVEVDPEKARALGVSPDQIASAVREANASAPGGTV
                     RRGQFRLPLRAYTEFQDPSQILETPVGPAGAGIRLHDLATVERTIAEPVSLTRLDGVA
                     AVGLVVYKDAGANTVTVTRDLYRVVEQLTGEFPDITIRVVAAQAEFVTDALANLGQEI
                     VLGGVLSLLVILLFLGDLRTSLAIGLIVPLSVLIALVVLQQLDVTINILSLGGLALGV
                     GLLVDNAIVVAEAAGRYIEDGMPKLEAARRAAEEVAGPLTAGTLTTLLVFGPIVFVRG
                     LGAALFRDLSLSVVTTVAASLILALTVMPVLMVGRAGRRAGGRKQDRLSDRPTDRLAP
                     LHRLGHRVAELYERGMMWCLARPATVFGIALVLTLGTAWIGARLPREILPSVDEGIVV
                     ASLKLPDGTAIEETGRQVARLETVSRDMGAAGIYSRIGTATDEEILAGADPGSSSSAQ
                     VLVPVPPDQDAAEFARRLRRAVPDLAQGALALDLAGQSEFGSLIGREGRVVRVEVSAP
                     RPDVAARWADSARTLMAGLPTLADVRDAFSGTQPSIELTLERRRIAERNLTVNAVSGA
                     IAGGLGGVRANDFRETDRRTPIRVRFAGEHNENLETALATPVQGVPVGQLVQIQERPA
                     PIEVVRVDQRPVSVVEALVEEGGTARATQDVTEVLSRQSTPPGLTWSLGGADLEQRRT
                     TRELGLVAVLSVALVFLVLAGEFASFTTPLLVMTTVPLAAAGGILLLWLTGQSLNAVS
                     LIGMVVMIGIADNDAVVKLDAIRRFRAQGHAVDQAVLLGGRQRLRAIAMTSITTITGV
                     LPLVFGWGSGGELYQPLAAGVIGGSVSATLVTFFLLPTAYAVVERRYGRTDGLTDGRT
                     DGPTDRRTRL"
     gene            9422..12526
                     /locus_tag="VGA78_04935"
     CDS             9422..12526
                     /locus_tag="VGA78_04935"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9893243.1"
                     /translation="MITWASKRPAVIWAFAVALILAGAVSFARLPLATRTRIELPQLS
                     VQTAWPGASAELIEAYITSPIEAAIQPVRGVRKTSSESGEGGRFGGGGTAGSRIRIDL
                     DPGVDVGLTRLAILERLELLRPELPLGVSPPRVTNYVPEELSEAPLLQYTVSGPYTPG
                     TLARVMQDEVEPRLATVEGVAGISSGGMAETGISVIYDATRLRQLGVTPAAIQAALNS
                     ARQVEALGVDQRGDFERPVVMRDQPTVMQDLERLPVRGPGGRVFALGELADVLQEEDT
                     RGQFNRFNAQTAVTMSVNRLAGSDAIQTAARVRRALAEMQPSLPPGVRFHLRSDESEE
                     LADQLRDLAIRGSLAFAAVMLVLAFALRSARGVFLVMGSAAVSIAGTALALYLLKIPA
                     NLLTLAGLGMGIGVLVQNGLIVVERLRGVADTPEARAETGRRILPAVAGSTLTTAVVL
                     FPFLYLQGNARAAFVPFAAAFAFGLAWSVFASVVMIPAVGAGHGMRTGHWPRLARFYD
                     RFLITLLRWRYLTVTLAAGLLGLVGWGFATRVERLSFGAFGGERTTLSVFVSFPRGSD
                     PESLDRAIREFEVIAVGREGVEQVQAQGFSGFARMEVRFTKEAAYTAVPAMMQDELTQ
                     RAVLVGGATISVFGRGQGFSSGGGGGTVGFRIKLLGFSFEGVERLARDLQHRLEQIPR
                     VRNVNINAGSFWMSERAMSVGIEPDRPALARAGVTATEFALAVGREVRGQQGGTRLEL
                     EGDEVLVTLKAKGARERSLLELEDAIVPNRAEAPVRVRDLALVDEREGLSMISREDQQ
                     YVRIVSYDFRGPARLAQRTHDGFMKSIGVPPGYSVADDRFAWEEDDSGKLLWLVFGAG
                     LVLVIISVALVFDSTWASLVVFLSLPVCVAGVAAIFWASKTAFGREAAVGLILVIGLA
                     VNQTILLVHAALDRRTDGPTDRRSAYRRLTPRDVLSSANDRAGMIVLVSLVTMASLIP
                     LAVGTDPDSLFGSIALATAGGTVAGTVGALFLMPVLLVSWRRSRSKAVEGVEAVEGVE
                     GSRR"
     gene            complement(12567..14483)
                     /locus_tag="VGA78_04940"
     CDS             complement(12567..14483)
                     /locus_tag="VGA78_04940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX9893244.1"
                     /translation="MAGESSRSVDIRLRAAVESAPSGLLMVDQTGRIILLNRMVEELF
                     GYPREELLGRPLEILIPERFREGHPGFRLGFMADPRMRPMGVGRDLYGRRKDGSEMPI
                     EIGLTPIPTDEGLFVLSSIVDITSRKRAEERFRVAVESAPSGMLMVDGSGRIVLVNRE
                     IERLFGWSREELLDQPVEKLVPRRFRAAHPGFRSGFFARPLARAMGAGRELFGLRKDG
                     SEIPIEIGLNPIETEDGLFVLSSIVDIGPRKRAEREREVLESQLRHAQKMEALGTLAG
                     GVAHDFNNVLQGIVGYAELLGEHLPPGSRPLSDLQEVLRMAERGRQVVQRILAFGRRQ
                     DQIRRPLDLAEPVQQALKLLRSTLPPAVDIRAHIADPGPRVMADATGLHQVMMNLANN
                     AAQAMPEGGTLDVTVQRLYVRDSLVRAHPDLHEGWYGVMIVSDTGIGMTPDVRERAFE
                     PFFTTKPAGTGTGLGLSMVHGIVREHSGVVLLDSTAGQGTTVRCYFPEREGEEEPGVI
                     EDPELPPGRGERILVVDDEPKIVGFVERWLDDLGYKVRIETHPEAALEAVRAAPDNWD
                     LVMTDYLMPGMTGLELSSQIRSIRPDLPILLTTGFIEDIPEEAIRRAGVGRVIKKPVF
                     MRPLAQALRDLLTT"
     gene            complement(14488..>15241)
                     /locus_tag="VGA78_04945"
     CDS             complement(14488..>15241)
                     /locus_tag="VGA78_04945"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX9893245.1"
                     /translation="PTELAQALEQDQFDLQYHPVLDLRLRSVVGVEALARWRHPTLGM
                     ILPEEFIPMAEESGLIEPLTRWVFARGVSDCGRWWQDGNQLRLSLNLSAHNLDDLALP
                     DWTMDLCQRLGVPSSAVTIELTESASMQDIVKTMDILTRFRLKGFHLSIDDFGTGFSS
                     LVQLQRLPFSEMKVDRSFVTTIPQSKESAVIVKTIIDLAHNLSLRAVAEGVEDQDVMD
                     QLEAWGCDLAQGFYISRPLRLQQLTEYLAERA"
BASE COUNT         2310 a         5082 c         5323 g         2526 t
ORIGIN      
        1 cagcactctg gttcccacct cgataccatg gagactcgcc atgccattcc cgcctaagcg
       61 tgaccaccgg attccccttg ctgccgcggc tgccatgacc aagcggtatc gcgatgaggc
      121 gacgggagcc gaaacggccc agatgttccc ccgggaggtc atcgagaccc tcttgagtca
      181 gccaggggca ttcggaaccc gattctattt cggacgcgag gcagccggag ggccgatcag
      241 attggttgcc gtggcggtgg acagccaggg gaatgatctg gcaggcggcg agataattga
      301 ctttggcttc ccgtgcccac cgtggtgttc aggcgacaac caactgaact cctgagtcca
      361 tgccagctcc ttcggtaatt gcgcatatcg ctgtgtggtc tcagcttctg cccgcgacag
      421 ttgtggccgc aaagcaaggc tggaaccttc gtccacgact gtggaccggc ctcgccctgc
      481 tgagcagcac cgttggcgac ggcgttcagt ttgtactagg ccgacgcggg ttgagcaatc
      541 tgtggatcgg ctacgtctcc actgctatca ccgggattct gattgtgacc gccctggccg
      601 aatggcaggt gaccggtcgc tccaggcaga cgatgtggct cgcgttgatt ctctacgtca
      661 tcatgtgggg aacgacaatg ctgttcgagg agacggctcg gtttagcctc ctcgccgtcc
      721 cgatccactc ggtcctggtg ttgttgctta gtttgtggac tctgatgtcg aacgccctga
      781 aggaccggcc ccagccgacc tatcgctacg attggttctg ggcgtgcctg ggtctggccc
      841 tgttgtacgg agcctcgagc gcgatgcagc ccctgctgcg gattctcatc gcagagggtc
      901 aaatgaacga cgcgatagcc gtgctcaatt tcaaagccgg gttccaagtc gtagccatgc
      961 ttttcatcac cgcgggaatg ctgtgtccgg ttcaggcgca ctctgggttt tcttcgttac
     1021 cggtgcgctg agcgtcacga ttgtcctggg caccatgggg acgttgctgg tgctctcaca
     1081 acggaaaacg ctggccctgc accggaggta cgcccaggat ctactcaggg cccaggagga
     1141 ggagcgggcc tggatcgcgc gcgaggttca cgacgatgcg gtccagcgcc tcgcggtcat
     1201 cgccaacgag ctgagcagca tcctgccggc ggcggtgtcc ggcggccagg ccaaccggat
     1261 cgatggcatc gtgggcgaag tgcaggacct gggcatttcc ctgcgcaagc tggcccacgg
     1321 cctccatccg tccgccatcg acaagggtgg catcgtcccg gcgctggagc agctcgccgc
     1381 cgacgtgggg tcggggcttg gcctcgacgt ccggatcacc atcgagcagc ctcccgccgg
     1441 gctcagccga gattcggagc tggccctcta ccggatcgcg caggaatcgc tgcgcaacgt
     1501 ggcccgtcac gccggcgtgc gtcaggcgac gctccgcctg ggccgccaca acggccgggt
     1561 ggtgctggaa gtagcggacc aaggcagcgg catctcccgg aacggaccag ccggcatcgg
     1621 gctgatgagc atgcgggaac gagcccggct ggcgggcggg accctcagca tctccagccg
     1681 gccgggactg ggaaccacca tcaccgccac gctgcccggg ccgggaccat ctgatgccta
     1741 agccccgcct gctgatcgcg gacgatcacg agatggtgag tcagggcctg aaggctctgc
     1801 tgggcgacac ctacaacatc gtgggagcgg tccgggatgg gcgcgaagtg atcgatgcgg
     1861 tcgggcggta ccggcccgat gtcctgctgc tcgacctctc cctgcccaac cgcaccggca
     1921 tcgacctcat tcccgagatc cgggccctgc acgagagcac ccggatcctg gtggtcacca
     1981 tgcacgtgga cgctgtgctg gccggcctgg ccatgcggct gggggcccac ggctttgtcc
     2041 ccaaggattc cggggtgcag gagctgaacg aggcgatcgc agaggttctg gccggccgga
     2101 cctacgtgtc accccggatc ccgatccaca cccacaaggg gagctggggt ggcacccata
     2161 tgggattcgg ccagctgacg ccgcggcagc aggcgatcgt ccggctgacc ggccggggcc
     2221 gcaactccga agagatcgcc gaggccatcg ggatcagcgt ccatacggta cacttccacc
     2281 gccgcaacat ccggcgggtc ctggggctcc acagcgaagc ggagttcatg cgctatgcgc
     2341 tgatggtgca gctctcggcc gaggccggtg gatccggcag cagctagacc ggcgtgacca
     2401 ttcccagcta cctgcgatcg gtaaccgtcg cgttggttgc gggctgtggc aatgccgagg
     2461 cgccggccct cggcacaccg accagcgaca ccctggccgg cggcatcgtg cgggtgagga
     2521 acgatgtacc gatggggtgg cgcaatgggt cggccgcatg gcaggtgacc gaagagctgc
     2581 gcatcagcgg tgacgaaggg accgagtcgg aaatcatcaa tccccagagc ctcgccctcg
     2641 atgcgagtgg ccgggtctgg gtagcagacc agagcccggc tcggctcaaa ctgtacgggc
     2701 gcgacggccg gctggtccgg gtggtggcac gggagggaga aggaccggga gagttccggg
     2761 taggattcat cgtgccggcc gggacctacc tggtgctgca cgatccccag caatcccgca
     2821 ccagcgtgtt cgactccgcc ggcacgttcc tgcggagttt cccgtcccag tgttgttacc
     2881 acatggcgat cggcgccgac cccgagggcg gcgttctgat cgctggaatg gccgcgggcg
     2941 aagagcggcg gggacaggca tggtaccggt acagcctcga gggaaagctg ctggacacga
     3001 ccttcgtccc gagactgacg gaagacaagt tctggaccgt gggtgacccc aagcggatga
     3061 tgatgaacct tgccatcccg ttcacgccgc ggatcgaagc cgtatcgcac ccggcgggcg
     3121 gctttctgct gggtcactcg gggacctatc agctggcccg gattcgtcag gccggggaca
     3181 ccgccctcct gtttggaaga agctggaccc cccagccggt caccgaccag gaccggcggg
     3241 acatcatcga gcggatgatc cccaccttcg accagttcga cgaagccacg ctccggcggg
     3301 cctttcacgc cgaggatatc ccggccgtgc gaccggcgtt ctcgagcctg tgggtggatc
     3361 aggagggata cagctgggtc ttgcgggaca gcgtggagtt cgatgtgttc gatcctgccg
     3421 ggggttggct gggagagctc atcatttccc cctccttgtc cacggggact gcattctttg
     3481 gccgggcccg aatcacctca tcggtagagc agagcgacgg tcggccggtg gtggtggtct
     3541 ggcgggtcga caagctccag cgttagttcc cggcatcacc actgcgacgc tttccgatgg
     3601 cggagcatct ctagtccgcc gaccggttcg acgtcggacc atgacgccga ggcctcattg
     3661 attcgttcct ggaaatgggc ggtgcctgtt ttcctcgcgg ccccggcgct cgcccaggcc
     3721 ccccccgagg ttaccctgtc cgacgccgtg gcgctggccg cccgaaccga ccccaacgtg
     3781 gtgcaggcgc gcggcaacgt gcacaccacc ggcatcgggg tccgggccgc tcggagccgg
     3841 ttccttccct cgctctcgtt cgggggatcg ggcggcagct ccttcagcga ggggcccgag
     3901 cgcttcgacc cgatcaccaa tcagctgatc agcggcaaca gtcagaacca ggcggtgaac
     3961 ttcggcttca acaccgaagt ggagctgttc accggtttcc ggcgcggcgg ggcgatcaag
     4021 gaggcgcagg gccgggaggc ggtggccgac gcctcgctgg tggaagcgct ctcgacatcc
     4081 gccttgcaga cctccaacga tttcttttcg gcgcggcagg gacgggagct ggtcgaggcg
     4141 cgacgccgca gcgtggcgcg ggccgagatc cagctgcaga tcgcaatcgc ccggctgcag
     4201 acccgggccg cgacggtatc cgattcactt cgcgccgtgg tgcagctggg cgaagcccgg
     4261 ctgagcctcg ccaccgagga ggcccagctg gcccgttccg aagcctcgct ggctcggcgg
     4321 ctgggcctgt cgggtcggat cgcggccgcg gcggattcgg cgctgaccgc ccccggtccc
     4381 gcgctcgaca ccaccgcgat ccgggccgag gcgctgtccc gcgctccggc ggtgcgccgg
     4441 accgaggcat cggtccaggc tgccctgggc tcggtctcgg ccgcgaaggc cgactggtgg
     4501 cctcagctct cgctcggtgc cagctacaac tacaacggca gcaacgcgac cagctatgag
     4561 ctgttcaaca gccgcaacgc caccatcagc ctgcgctggc ccctgttcaa ccgattccag
     4621 cgcgagcagc agatcgcgca atcgcaggcc agtgtggata ccgagcgggc ccgttatgag
     4681 gacgcccggc ggctggtgga atccgatctc accacccagt tcgccgccct cgacgctgcc
     4741 cagcagcgga tcgatctggc ccagctctcc gtccgcgccg cccaggccga cgtggcggtg
     4801 gcggtcgagc gctaccggct ggggtccatc aacatcaccg agctcaacgc ggcggaatcc
     4861 gggctgaccc gggccgagga atcggcggtc accgcgcgat tcgattatct cagggccaag
     4921 gcacagatcg aagccatact cgggagacgg gtgtgacaca ttgttccggg ttccgcgtgc
     4981 ctcgtgccaa aggtgcggtg ctgggtgcgg tgctgggtgc ggtgctgggt gccgggtgta
     5041 agggtggctc ggcatcaggc gggtccgata gcaccgccac ggctgactcg gtcgcgacac
     5101 cgtctgctct cactcttccc gtcgtgggcg aggaagtccg ccggggcgat ctggtgctca
     5161 ccgtctccac taccggtcag atccggtccg aggcggtggt gccgctcaag gtggaggcga
     5221 cgggaacggt cctcgaggtg ctggcccggc cgggcgatcg gatccgcaag aaccagccca
     5281 tcgtgaagct ggatccccgt cccttcgaga tctcgttgca ggaggcggaa gcggccttgc
     5341 gcgaggccca gctccggctg ctcgacaaca ctctgcccga ctcgctggtc tcggggaaat
     5401 cggtgaccgg cgagcgactc aggaacgccg aggttcgctc cggcgtggaa gccgcccggg
     5461 tccgcctgga gcgcgccaag tacgagcggg atcgggcggt gatcgcggcc ccgttcgacg
     5521 gcactctgga cgatctccgg gtgagcctgg gcgagcgggt cagcgtcggg caggagattg
     5581 gcaagctggt cgatctgcag aatctgcgaa tcgatgccgc ggtgctggag cacgatctgt
     5641 ctctggtgcg agtgggcggg gaggccctca tcaccacggc gtcggctccg gatcgcccgg
     5701 tgcggggccg gatcgcggcc ctgctcccgc tggtggacag caccacccgg gccggccggg
     5761 cgctgatccg ggtgcaaggc aacggggtgc tccggcccgg catgtacgcc gacgtgcgac
     5821 tcgaggccac ccgtctcacc aatcggatca tcgtccccga gcgcgccgtc atccagcgcg
     5881 acggccgccc gctcgtcttc gtggtgcggg acggccgggc ccagtggact tacatcctgc
     5941 cgggccggtc gaacggactc gagaccgagg tgctgcccga cagctctacc gggcagatac
     6001 cgctcaaccc gggtgacatg gtcctggtcg aaggccatct cacgttgacg cacgatgcgc
     6061 cggttcgagt agtcccgcgc gccgaacggc ggacgccgtg acccctccat cactgattca
     6121 gccgtgccag gaagcaggga gcggggagca gggagcggga atgcggaagc ggggagaccg
     6181 ggcccctgct gcctgcttcc tgctccctcc ttcctgggtg ttctaggtca tgtctttcgc
     6241 tgccgctgcg ctcaaacggc cggttaccac ggtcgccgcg acgctggccg ctgtgctgct
     6301 cggcgcggtc tcgctttcgc ggctgccggt ctcgctgctg cccgacatca ccctcccggt
     6361 cctcacagtt cgtaccctct accccggcgc ggctgcgacc gaggcctccc ggatggtggc
     6421 cgagccgatc gaacaggcgg tggcctccac cccgggcctg gtcgagctcc gctcggtgag
     6481 ccgcaatggc gaggtcacca ccacgcttcg gttcgggtgg ggcaccgaca tggcgcagac
     6541 ggtgctgctg gtacgggagc gactggacaa tgcgcggccc cagctgccgg agcgggccga
     6601 acgccccacc ctgctcacca gcgatccggg cgagcggccc atcgcggtcc tggcgctgtc
     6661 cggccccggc gacctgcaat cgatctcccg caccgctgaa gacgtccacg cccgccggct
     6721 ggagcagctg gccggagtgg cgagcgtggc ggtcgccggg aagccggagg aggagatccg
     6781 ggtggaggtc gatccggaga aggcccgggc cctgggggtt tcgcccgacc agatcgcgag
     6841 tgcagtgcgg gaggccaacg ccagcgctcc cggtggcacc gtgcgacggg gtcagttccg
     6901 cctgccgctc cgggcctaca ccgagttcca ggatccgtcc cagatcctgg agacgccggt
     6961 gggaccggcc ggcgcgggga tccggctgca cgacctggcg acggtcgagc ggaccatcgc
     7021 cgagccggtc tcgctgaccc ggctcgacgg cgtcgcggca gtcgggctgg tggtgtacaa
     7081 ggacgcgggc gcgaatacgg tgaccgtcac ccgcgatctc tatcgcgtgg tggagcagct
     7141 gacgggcgaa ttccccgaca tcaccatccg cgtggtggcg gcgcaggcgg agttcgtcac
     7201 cgacgcgttg gcgaatctgg ggcaggagat cgtgttgggt ggggtgctgt ctctcctggt
     7261 cattctgctg ttcctgggcg acctgcgcac gtccctggct atcgggctga tcgtgccgct
     7321 ctcggtgctg atcgcgctgg tggtgctgca gcagctcgac gtcaccatca acatcctgtc
     7381 gttgggcgga ctggcgctgg gggtcggtct tctggtcgac aacgccatcg tggtggccga
     7441 ggcggccggg cgctacatcg aggacgggat gcccaaactc gaagccgctc ggcgggccgc
     7501 cgaagaggtg gccgggcccc tcaccgcggg cacgctgacc acgctgcttg tgttcggccc
     7561 catcgtcttc gtgcgggggc tgggcgcggc gctgttccgg gacctgtccc tctcggtggt
     7621 gacgacggtg gcggcctccc tgatcctggc cctcacggtg atgccggtac tcatggtcgg
     7681 gcgggcgggt cggcgggcag gcgggcggaa acaagaccga ctgtccgacc gaccgaccga
     7741 ccgactggcc cccttgcatc ggctgggcca ccgggtggcc gagctctacg agcggggcat
     7801 gatgtggtgc ctggcgcggc cggccacggt gttcgggatc gccctggtcc tcacgttagg
     7861 cacggcctgg atcggtgccc ggctcccccg cgagatcctc cccagcgtgg acgagggcat
     7921 cgtggtggcg tcgctcaagc tgcccgacgg cacggcgatc gaggaaaccg ggcgccaggt
     7981 cgcgcggttg gaaaccgtct cacgggacat gggggccgcc gggatctact cccggatcgg
     8041 caccgccacc gacgaagaga tcctggccgg cgcggatccg gggtcctcga gctcggccca
     8101 ggtcctggtg ccggtccccc ccgatcagga cgccgccgaa ttcgcgcgcc ggctgcggcg
     8161 ggcggtaccg gacctggccc aaggcgctct ggccctcgac ctggcgggtc agtcggaatt
     8221 cggaagcctg atcggacgcg agggccgggt ggtgcgggtg gaggtttcgg ctccccgtcc
     8281 cgacgtcgcg gcgcgctggg ccgactcggc ccgcaccctg atggccggac tgccgaccct
     8341 ggccgacgtg cgggacgcct tcagcggcac ccagccctcg atcgagctga cgctggagcg
     8401 gcgccggatc gcggaacgca atctcaccgt caatgcggtc tcgggcgcca tcgccggtgg
     8461 gctgggcggg gtacgcgcca acgatttccg cgagaccgac cggcgcactc cgatccgggt
     8521 ccggttcgcc ggcgagcaca acgaaaacct ggagaccgcg ctggccaccc cggtgcaggg
     8581 cgtcccggtc ggccagctgg tgcagatcca ggaaaggccg gcgcccatcg aggtggtgcg
     8641 ggtcgatcag cgcccggtgt cggtggtgga ggcgctggtg gaggaaggcg gcaccgcccg
     8701 cgcgacgcag gacgtgaccg aagtcctgtc ccgccagagc accccgccgg gactgacctg
     8761 gagcctcggg ggtgccgacc tggaacagcg ccggaccacc cgggagctgg gcctggtggc
     8821 ggttctgtcg gtggcactgg tcttcctggt gctggcgggt gagttcgcct cgttcactac
     8881 cccgttgctg gtgatgacca cggtaccgct ggcggccgcg ggcgggatcc tgctgctctg
     8941 gctcaccggg cagagcctca acgcggtctc gctgatcggc atggtggtca tgatcggcat
     9001 cgccgacaac gacgcggtgg taaaactcga cgccatccgc cgcttccggg cccagggaca
     9061 tgcggtggat caggcggtgc tgttaggcgg gcgccagcgg ctccgcgcca tcgccatgac
     9121 ctcgatcacc acgatcaccg gcgtcctgcc cctggtgttc ggctggggca gcggcggcga
     9181 gctgtatcag ccgctggcgg cgggcgtgat cggcggatcg gtctcggcca ctctggtcac
     9241 cttcttcctg cttcccaccg cgtacgcggt ggtggaacgc aggtacggaa ggactgacgg
     9301 actgacggac ggacggaccg acggaccgac ggaccgacgg acacgactat gaacctggct
     9361 acaagattcg gacgaaggtg atggttaccg accgtcggtc cgtctgtccg tccgtccgtc
     9421 catgatcacc tgggcgagta aacgacccgc cgtcatctgg gcgtttgcgg tcgccctcat
     9481 cctcgcgggc gcggtgtcct ttgcgcggct cccgctcgcg acccggaccc ggatcgagct
     9541 gccccagctc agcgtgcaga ccgcctggcc cggcgcctcc gccgagctga tcgaggccta
     9601 catcacctcg ccgatcgagg cggccatcca gccggtccgc ggagttcgga agaccagctc
     9661 cgaatcgggc gaagggggcc ggttcggagg cggcggcacc gccggaagcc ggatccggat
     9721 cgacctcgac cccggtgtgg acgtggggct cacccggctg gcgatcctcg agcgactgga
     9781 gctgctgcgc cccgaactgc cgttaggcgt gagccctccc cgggtcacca actacgtccc
     9841 ggaggagctc tccgaggcgc cgttgctgca gtacaccgtg agcgggccgt acaccccggg
     9901 aaccctcgcc cgggtcatgc aggacgaggt cgagccccgg ctcgcgacgg tggaaggcgt
     9961 ggccggcatc agcagcggcg gcatggccga gaccggtatc tcggtcattt atgacgccac
    10021 tcgcctgcgg cagctcgggg tgaccccggc ggccatccag gcggcgctca attccgcccg
    10081 ccaggtggag gccctcgggg tcgaccagcg aggggacttc gagcgcccgg tagtgatgcg
    10141 ggaccagcct accgtcatgc aggacctgga gcggcttccg gtccggggac ccggagggcg
    10201 ggtctttgcg ctgggcgagc tggccgacgt cctccaggag gaggacaccc ggggacagtt
    10261 caaccggttc aacgcgcaga ccgcggtcac catgagcgtg aaccggctgg ccgggtccga
    10321 cgccatccag accgcggcgc gggtgcgacg agccctggcc gagatgcagc cgagcctgcc
    10381 gcccggggtg cgcttccatt tgcggtcgga cgagagcgaa gagctggccg accagttgcg
    10441 cgatctggcg atccgggggt cgctggcctt cgccgccgtc atgctggtgc tggcctttgc
    10501 gctgcggagt gcccggggcg tgttcctggt gatgggcagc gcggcggtct cgatcgccgg
    10561 aacggcgctg gcgctctatc tgctcaagat ccccgccaat ctgctcaccc tggcaggctt
    10621 gggcatgggg atcggcgtgc tggtgcagaa cgggctgatt gtggtggagc gcctgcgggg
    10681 agtcgcggac actcccgagg cgcgggccga gaccggccgc cggatcctcc cggcggtcgc
    10741 gggttccacc ctcacgaccg ctgtggtgtt gttcccgttt ctgtatctgc agggcaatgc
    10801 ccgggccgcg ttcgtcccgt tcgcggcagc cttcgccttc ggcctggcgt ggtcggtgtt
    10861 cgcgtcggtg gtgatgatcc cggccgtagg cgcgggccac ggcatgcgga ccggtcactg
    10921 gccccgactg gctcgcttct acgaccggtt cctgatcacg ctcctgcgtt ggcgctatct
    10981 gacggtgacc ctggccgcgg gactgctcgg gctggtgggc tggggctttg ccactcgggt
    11041 ggaacggctc tcgttcggag cgttcggggg tgaacgcacc accctctcgg tcttcgtgag
    11101 cttcccccgc ggctccgatc ccgagtcgct ggatcgggcc attcgggagt tcgaggtgat
    11161 cgcggtgggt cgggaaggcg tcgagcaggt tcaggctcag ggcttcagcg ggttcgcccg
    11221 gatggaagtg cggttcacca aggaggcagc ctacaccgcc gtccccgcga tgatgcagga
    11281 cgagctgacc cagcgcgcgg tcctggtggg cggcgccacc atcagcgtgt tcgggcgagg
    11341 ccaggggttc tcatcgggcg gtggcggcgg cacggtcggc ttccggatca agctgctggg
    11401 cttctctttc gaaggagtcg agcggctcgc ccgggacctg cagcaccggc tggagcagat
    11461 cccccgggtg cgcaacgtca acatcaacgc cggcagtttc tggatgagcg agcgggccat
    11521 gagcgtgggc atcgaacccg atcgccccgc gctggcgcgg gccggcgtca cggccaccga
    11581 gttcgccctg gcggtcggtc gggaagtccg gggccagcag ggcggaaccc ggctggagct
    11641 ggaaggcgac gaagtgctgg tcaccctcaa ggccaagggt gcgcgggagc gatcgctgct
    11701 ggaactggag gacgcgatcg tgccgaatcg ggcggaggca ccggtgcggg ttcgcgatct
    11761 ggccctggtg gacgagcgcg agggcctctc catgatcagc cgggaagacc agcaatacgt
    11821 gcggatcgtg agctacgatt tccggggtcc cgcccgcctg gcgcagcgga cccacgacgg
    11881 cttcatgaag tcgatcgggg tcccgcccgg ctactcggtg gccgatgacc gattcgcctg
    11941 ggaggaagac gacagcggca agctgctgtg gctggtgttc ggcgccggcc tggtgctggt
    12001 gatcatttca gtggcgctgg tgttcgactc gacctgggcc tcgctggtcg ttttcctcag
    12061 tctcccggtc tgcgtggccg gcgtggccgc catcttctgg gccagcaaga ccgccttcgg
    12121 gcgggaggcc gccgtggggc tgattctggt gatcggcctg gcggtcaacc agacgatctt
    12181 gctggtgcac gcggcgttgg accgacggac cgacggaccg acggaccgac ggtcggctta
    12241 ccgtcgtctg acaccccggg atgtactctc ctcggccaac gaccgcgccg gcatgatcgt
    12301 gctggtgtcg ctggtgacca tggcgagcct gatcccgctg gcggtcggca ctgatcccga
    12361 cagcctgttc ggatccatcg cgctcgccac cgccggcggg accgtggcgg gaacggtggg
    12421 ggcgttgttc ctgatgccgg tcctgctggt gtcgtggcga cgaagccggt cgaaggcggt
    12481 cgaaggagtc gaagcagtcg aaggggtcga aggtagtcga aggtgaccct gcccctaacc
    12541 ggcttcgact ccttcgactc cttcgactag gtagtgagaa gatcgcgcag cgcctgggcc
    12601 aggggtcgca taaacaccgg cttcttgatc acccggccca cgccggcccg ccggattgcc
    12661 tcttccggga tgtcctcgat gaatccggtg gtgagcagga tgggcaggtc gggccggata
    12721 ctgcggatct gggacgacag ctccagcccg gtcatcccag gcatcaggta gtcggtcatc
    12781 accagatccc agttgtcggg cgcggcccgc accgcttcca gcgcggcctc gggatgggtc
    12841 tcgattcgga ccttgtaccc cagatcgtcg agccagcgct ccacgaagcc gacgatcttg
    12901 ggctcgtcgt ccaccaccag gatacgctct cctcgtcccg gcggcagctc cgggtcttcg
    12961 atcacgcccg gctcttcctc cccttcccgc tccgggaaat agcaccgtac ggtggtcccc
    13021 tgccccgcgg tcgagtcgag caggaccacg ccgctgtgtt cccggacgat cccgtgcacc
    13081 atcgacaggc cgagtccggt tccggtgccg gccggcttgg tggtgaagaa cggttcgaag
    13141 gcccgttccc gcacatcggg cgtcatgccg atcccggtat cggacacgat catcacccca
    13201 taccagcctt catgcaggtc ggggtgagcc cggaccagac tgtcgcgcac atacaggcgt
    13261 tgcaccgtga catcgagggt accgccctcg ggcatggcct gggccgcatt gttggcgaga
    13321 ttcatcatca cctggtgcag tccggtggca tcggccatca cccggggacc gggatccgcg
    13381 atgtgggccc ggatatcgac cgcgggcggc aaggtactgc ggagcagctt cagggcctgc
    13441 tggaccggct ccgccagatc cagcggccgg cgaatctggt cctgccgccg gccgaaggcc
    13501 aggatccgct gcaccacctg ccggccccgc tccgccatgc ggagcacctc ctgcagatcc
    13561 gacagaggcc ggctcccggg cggcagatgc tcgcccagca gctcggcgta acccacgatc
    13621 ccctgcaaca cgttgttgaa gtcatgggcg acgccaccag ccagcgtgcc taacgcctcc
    13681 atcttctggg cgtggcgcag ctgactctcg agtacctcgc gttcccgctc ggcccgcttg
    13741 cgggggccga tgtccacgat ggagctcagg acgaacaggc cgtcttcggt ctcgatcgga
    13801 ttgagcccga tctcgatcgg gatctccgag ccgtccttgc ggagcccgaa cagttcccgc
    13861 cccgctccca tggcccgcgc caggggccgg gcaaagaatc ccgaccggaa gccgggatgc
    13921 gcggcgcgga agcggcgcgg gaccagcttt tcgaccggtt ggtccagcag ctcctcgcga
    13981 ctccagccga acaagcgctc gatctcgcgg ttcaccagca cgatccgtcc cgagccatcc
    14041 accatgagca tgccgctcgg ggccgattcc accgcgaccc ggaaccgctc ctcggcccgt
    14101 ttgcgactgg tgatgtcgac gatggagctg agaacgaaga ggccttcgtc ggtgggaatc
    14161 ggtgtcagcc cgatctcgat gggcatctcg ctgccgtcct tccgccggcc atagagatcg
    14221 cggcccaccc ccatcggtcg catgcgggga tcggccatga accccagccg gaagcccggg
    14281 tgtccctcgc ggaaccgctc cgggatcagg atctccagcg ggcgacccag gagctcctcc
    14341 cggggatacc cgaacagctc ctcgaccatg cgattcagca ggatgatccg gccggtctgg
    14401 tcgaccatca gcagcccgct gggggcggac tcgaccgcgg ctcggagtcg gatgtcgacg
    14461 gatcgggacg attcaccggc catgacctta cgccctttcg gccaggtact cggtcagttg
    14521 ctgcagccgc aggggccggg agatgtagaa tccctgggcc aggtcgcatc cccaggcttc
    14581 gagctggtcc atcacgtcct ggtcttccac gccctcggcc accgcccgca gactgaggtt
    14641 atgggccagg tcgatgatgg tcttgacgat gacggcactc tccttggact gcggaatggt
    14701 ggtcacgaag gaccggtcga ccttcatttc cgagaagggc agccgctgca gctggaccag
    14761 cgaggagaac ccggttccga aatcgtcgat cgagaggtgg aaccccttga gccggaagcg
    14821 ggtcagaata tccatggtct tcacgatatc ctgcatgctg gccgactcgg tgagctcgat
    14881 cgtcaccgcg gacgatggga ctcccagacg ctggcagagg tccatggtcc agtccggcag
    14941 cgccagatcg tcgaggttgt gggccgacag attgagcgag agccggagct gattgccgtc
    15001 ctgccaccat cggccacagt cggagacgcc ccgcgcgaag acccagcggg tgagcggctc
    15061 gatcagcccg gattcctccg ccatcgggat gaactcctcc ggcaggatca tccccagcgt
    15121 gggatgccgc caccgggcca gggcttccac cccgacaacg ctgcggaggc ggagatccag
    15181 cacggggtgg tactgcaggt cgaactggtc ttgctcgagg gcctgggcca gctcggtggg
    15241 a
//
LOCUS       DASWKS010000166         2296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_450319, whole genome shotgun sequence.
ACCESSION   DASWKS010000166 DASWKS010000000
VERSION     DASWKS010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450319"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2038
                     /locus_tag="VGA78_04950"
     CDS             <1..2038
                     /locus_tag="VGA78_04950"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9893246.1"
                     /translation="DLVQVQPALGRLYLPQDSDRGDARIAVLSHGFWQSAFGGDPAAI
                     GRAIQLNNQTYEIIGVLPASMTYPRSGQIFIPYLIQERDRQPNARGRWAITAIGRLRA
                     DIPMGSLTARLSDVSARWHERFGGYDPASGHTLVGQPFVRWMAGELRGFLLVLQAAVV
                     FLLLIACANVGNLQLVRATERERELAVRSALGAGSWSILRQLLLESGLLALAGGVAGV
                     ALATAAVALLRRVDVPELQALTGLRVDGGVLAYSALITLAATFLFGLLPAWRIRRPDL
                     HGLLRQAGRGLTGGRLRLLRAGAVVQVALSVVLVLGAAALVRSLGRLLAIDPGFAVEH
                     VTTFRLSLPSSSYPDAPRLIAAFDDITTRLRAMPGVSQVGYISEIPFGPGRNSSPFRV
                     RGRPEAPGGSLMHADMRFVHDQYFEAMGIPLRRGRLFASSDNAETRAAALIDQRLADE
                     FFPGEDPIGQVINQGPDAVIVGVVGSVKHGALQEDDKATVYYSYRQMTWLTGLTGVIR
                     TSGIPITLGQLQSVVSGFDPDLPVFDVRTMQDRLNGSLGPRRVGTTVLAGFGLAALLL
                     ALLGVYGVLSYSISRRTQELGIRLALGALPGALVRSVTGTGLALGGIGLVVGIAGFAA
                     ANRLLGSLVYGVRVIDPVTIAAGIGILGVGVLLASVIPARRVVRVDPTQALREE"
BASE COUNT          308 a          751 c          818 g          419 t
ORIGIN      
        1 cgatctggtc caggtgcagc ccgcgctggg ccgcctctat ctcccccagg attccgaccg
       61 aggcgatgcc cggatcgcgg tgctgagcca tgggttctgg cagagcgcgt tcggcggcga
      121 tccggcggct atcggccgcg ccatccagct caacaaccag acctatgaga tcatcggggt
      181 gctgccggcc tccatgacgt atccccggag cggccagatt ttcatcccct acctgatcca
      241 ggagcgcgac cggcagccta acgcgcgcgg gagatgggcc atcaccgcca tcgggcgtct
      301 ccgggcggac ataccgatgg gcagccttac tgcgcgtctg tcggacgtat ccgcccgatg
      361 gcacgagcgc tttggaggct acgatccggc ctcgggtcac acgctggtgg ggcagccgtt
      421 tgtccgatgg atggccggcg agctgcgcgg ctttctgctg gtgctgcagg ccgccgtggt
      481 ctttctcctg ctgatcgcct gcgccaacgt gggcaacctg cagctggtgc gggccaccga
      541 acgggagcgg gagctggccg tgcgttcggc gttaggcgcc ggcagctggt ccattctgcg
      601 ccagctgctg ctggaaagcg ggttgctcgc gctggccggc ggtgtcgccg gcgtggcgtt
      661 ggccaccgcg gcggtggctc tgctgcgacg ggtggacgtg ccggagcttc aagcactcac
      721 cgggctcagg gtcgacggcg gggtgctggc gtattcggcg ctcatcaccc tcgccgcaac
      781 gttcctcttc ggactgctgc cggcctggcg gatccgccgg cccgacctgc atggcctgct
      841 gcgtcaggcg ggccgggggc tcaccggcgg acggctgcgc ctgctccggg ccggtgcggt
      901 ggtccaggtg gcgctgtcgg tggtcctggt gctgggcgcg gcggccctgg tccggagcct
      961 gggccggttg ctggcgatcg atcccggctt tgcggtcgag catgtcacca ccttccggct
     1021 ttcgctgccc tccagctcct atcccgacgc tccccggctg atcgccgcct tcgacgacat
     1081 cacgactcgg ctgcgcgcca tgccgggggt ctcccaggtc gggtacatca gcgaaatccc
     1141 cttcggcccc ggccggaaca gcagtccctt ccgggtgaga ggccggccgg aggcaccggg
     1201 cggctccctg atgcacgccg acatgcgttt cgtgcacgac cagtatttcg aggccatggg
     1261 gatccccctg cggcggggcc ggctattcgc gtcaagcgat aatgccgaaa cccgggcggc
     1321 ggccctcatc gaccagcggc tggcggatga gttcttcccc ggtgaagatc ccatcggaca
     1381 ggtgatcaac cagggtcccg atgcggtcat cgtaggcgtg gtgggatcgg tcaagcacgg
     1441 cgcgttgcag gaggacgaca aggccaccgt ctactactcc tatcgccaga tgacctggct
     1501 caccgggctc accggtgtca tccggaccag cggcattccc atcactctgg ggcaactgca
     1561 gtcggtggtc tccggcttcg atcccgatct gccggtcttc gacgtccgca ccatgcagga
     1621 ccggctcaac ggctctctcg gcccgcgacg agtcggaacc acggtgctcg ccggcttcgg
     1681 cctggccgca ttgctcttgg cgctgctcgg cgtctatggc gtgctgagct acagcatcag
     1741 ccggcgaact caggagctgg ggatccgact ggcgctgggc gcgctgccgg gtgcgctggt
     1801 gcgatcggtg acggggaccg ggttggcgtt gggcgggatc ggcctggtgg tcggcattgc
     1861 cgggtttgcg gcggcgaatc ggttgctggg gtcgctggtg tatggcgtcc gggtcatcga
     1921 tccggtcacc atcgcggccg gtattggaat ccttggggtg ggcgtgctac tcgcttcagt
     1981 gattccggcc cggcgggtgg tgcgggtcga tccgacccag gccctgcgcg aggagtgagg
     2041 gagctggatg gtcgccgcct gcaccgaact acggcgagac gcagggagga tgggcttgga
     2101 ggggcgattg aactggagaa tgccgaatgc ccaatgccca tagcagaggg gaactattcc
     2161 ggcggcctcc ttctgctatc ggcattgggc attgggcacc ttcactcggt cacgggaggg
     2221 ccggggtgag ggaaaccgcc gccgcagcaa tcccgcgcag gtcccgcgtc acccgatccc
     2281 agttgtagta cgtctc
//
LOCUS       DASWKS010000167         9868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1564213, whole genome shotgun sequence.
ACCESSION   DASWKS010000167 DASWKS010000000
VERSION     DASWKS010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9868
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1564213"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1909
                     /gene="thrS"
                     /locus_tag="VGA78_04955"
     CDS             <1..1909
                     /gene="thrS"
                     /locus_tag="VGA78_04955"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEX9893247.1"
                     /translation="SVRELPRGTTGQQLAGQIGPGLAKAALAIRVDGEIRDLGRPITQ
                     SAKISILTDRDPDALGVLRHSAAHVLATAVREIFPGAGIGFGPAIEDGFYYDFEVPRP
                     FTPEDLERIEAGMREVAERDYPFVREEVSRDDAYRRFADDPLKLERITELGEDEVIST
                     YTDGPFVDLCRGPHVPSTGRLKHFKLLSTAGAYWRGDEKRQMLQRIYGTAWFKKEDLE
                     AYLHRLEEARKRDHRVLGKQLDLYSIQEVVGPGLAFWHPKGARIKWLLTRAVEDDNIA
                     SGYELVYTPSITREELFLISGHLPLYAANQYPAMSAGAGEAEDVRYRVKPMNCPMHCL
                     VYKSQLRSYRDLPLRLSEVANLHRNEKSGTLHGLLRVRGLCMDDAHIFCTVDQAEDEI
                     FLCLDQVERIVRQPFGFELDFEISTRPAQKLGEDAAWNQAEAVLQGALERKQIPFRID
                     AGGGAFYGPKIDIKFKDAIGRLWQGPTIQLDFQMPERFQLEYTGGDNKPHRPVMIHRA
                     IYGTLERFIGLLIEHFAGAFPVWLAPEQVRVLPISDHQTDVAREVTATLKTGGLRAVL
                     DASNETLSYRIRHAELMKVPYVAVVGQREADSGTVAVRVRGAGNKQEVMPLDAFLQRV
                     QSEVAGRALAP"
     gene            1906..3186
                     /locus_tag="VGA78_04960"
     CDS             1906..3186
                     /locus_tag="VGA78_04960"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX9893248.1"
                     /translation="MTAPGLVRVIGTGAFALTIINSIVGSGIFGLPAAAAAIMGPAAV
                     LGYVGCSFLVGLVALCFAESGSRLPETGGTYAWSRAAFGPAVGASVGYLMAFPNLAGA
                     NAAVGALLVASLRAALPGVSPMVPAALVAVVYLSFALTNIRSVAAGAWTSATLVVIKL
                     VPLLVLVVAGIGFIQTENLRWPTAPSAGTLGQGMVLLFFAFMGSEGPLSTIGEVRRPS
                     RTIPRALALAVLGTGTLYLGVQLVAQGVLGPRLAQASDAPLAEAAAIVFGPVGRTFLL
                     WAAIISTTGFISSDVLNGPRMLFALGNARLLPSIFGRVHPQFHTPYIAIVAYVLLCGG
                     LAITGTFRQLAVFAAAGTLAIYLVSVLGLLRIRRLGLRATDAPFVVPGGPVVPVTAAV
                     ILVGLLASLTGQEVLATLGLAVAGLVVGLVRSRV"
     gene            3262..4449
                     /locus_tag="VGA78_04965"
     CDS             3262..4449
                     /locus_tag="VGA78_04965"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX9893249.1"
                     /translation="MSDLTTPVIVSACRTPIGKYLGGLSSFAAPQLGAIAIREAVRRA
                     GIDAGVVDEVIMGHVLQGGSGQAPGRQAAIQAGLPGIIPSLTINKVCGSGLKAVMLAS
                     QAIKAGDAECVVAGGMEAMSASPHYLYGYRNGIKAGNQTIVDGMIHDGLWDSFGTTHM
                     GGYAEYTAQKAGVTRQEQDEFAYHSHRKAVAAIESCKFSQEIVPVEVATKGGVTNVTT
                     DESPRKETSVEALAKLKPAFQKDGSVTAGNAPGLNDGASALVVTSLAFAKAHGLTPLA
                     KVTAYATGGGEPKDLFFAPIIAVENLLAKAGTTINDYELIEANEAFAVQAIADGRALK
                     WDWDRVNVNGGAIALGHPIGASGARVLTTLLYAMRDRGKRTGLATLCLGGGNAVALSV
                     EAL"
     gene            4446..5282
                     /locus_tag="VGA78_04970"
     CDS             4446..5282
                     /locus_tag="VGA78_04970"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX9893250.1"
                     /translation="MTRTKAVGLSTAFLVSGFAVGYSLIGAIGTLLWRDEMPGLTEAA
                     AVQSAVLLPVFALATWIFGIRLARLGPTELRWRGRPGDSLRGLAIGAVPAAIVMLAAV
                     PLAGAGWSRDGGSFVAWLGTLPGLILVLFPAALLEEVIFRGVPLVLLAAAFGRPAALV
                     VTATLFGLLHALNPDVTPLAIGNVALAGVFLGVAFYLPGGLWTATGAHLGWNLTHAVL
                     AAPVSGLPFTMPWLDYRPGGPAWLSGGSFGPEGGILATVVLAVTVALAARYIEPNQES
                     FA"
     gene            5279..6121
                     /locus_tag="VGA78_04975"
     CDS             5279..6121
                     /locus_tag="VGA78_04975"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016293396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX9893251.1"
                     /translation="MNRVAVIGAGTMGNGIAHVFAQHGTSVTLIDVRQEALDQGLATI
                     RGNLDRQVKKGTIAAEAPAEILGRISPSTSLESAAGAGLVVEAATENPTLKYSIFETL
                     DRVVGPEVILASNTSSISITEIAAKTQRPDKVIGMHFMNPVPVMQLVEVIRGHATSDE
                     TTRSVLQTAAALGKTPVEVNDYPGFIANRILMPMINEAVYCVMEGVAQPEAIDTVMKL
                     GMNHPMGPLTLADFIGLDVCLAILEVMHQGLGDPKYRPCPLLRRMVAAGHLGRKAGRG
                     FYTY"
     gene            6280..6723
                     /gene="rpiB"
                     /locus_tag="VGA78_04980"
     CDS             6280..6723
                     /gene="rpiB"
                     /locus_tag="VGA78_04980"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEX9893252.1"
                     /translation="MPENIPIGSDHAGFQLKERLKEELRRMGYAVEDVGTDSASSVDY
                     PDFAHPVATRVERGDAKRGVLLCGTGLGMSYAANRHHGVRAAVAWTPEIARLAREHND
                     ANVLVLPARFVSDDEAVVILRTWLETPFEGGRHGRRVEKIEPESA"
     gene            6720..8000
                     /gene="glyA"
                     /locus_tag="VGA78_04985"
     CDS             6720..8000
                     /gene="glyA"
                     /locus_tag="VGA78_04985"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX9893253.1"
                     /translation="MNLDHGAPLRAVDPEIAALADREVERQRNGLELIASENFASRAV
                     LEAMATALNNKYAEGYPGRRYYGGCEVVDLVERLAIERAKRLFGAEHANVQPHAGAQA
                     NFAAFMAVLPPGGTLLAMALPHGGHLSHGSPANHSGIIWRATHYGVDPATGRIDYNRV
                     REIAKAERPGLIVAGGSAYARIIDFAAFRSIADEVGALLLVDMAHFAGLVAGGVYPSP
                     VPHAQLVTSTTHKTLRGPRGGIILSIESLAKPVDKSVFPGHQGGPLEHVIAAKAVAFH
                     EALTDDFRTYARQTVANARTLANGLMARGFAIVSGGTDCHLLTVDLRPKGLTGKEAEA
                     ILGRAGITVNKNTVPDDPQSPFVTSGVRLGTPALTTRGMAEAEMDQIAELINRALTRP
                     DDALLERIRGEVEVLAGGFPLYAEEPTVGAGTAE"
     gene            7997..8416
                     /locus_tag="VGA78_04990"
     CDS             7997..8416
                     /locus_tag="VGA78_04990"
                     /inference="COORDINATES: protein motif:HMM:TIGR04138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Minf_1886 family protein"
                     /protein_id="HEX9893254.1"
                     /translation="MNQVRLAEELLERIHARETRYAEQAYLFVLASIEYLQTRLPMRR
                     HVSGQELAGAVRDYAREQFGLLAWAVLEHWGVVETLDVGRIVYTLVDVGLLITRPEDR
                     LEDFDRVFEFRSAFDDWSYVWEGVPGPGGGASRREVT"
     gene            8413..8610
                     /locus_tag="VGA78_04995"
     CDS             8413..8610
                     /locus_tag="VGA78_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893255.1"
                     /translation="MIDGRDWPGCLKCDKGRLIPLSDYGRDGAPITYKAWVCTNPECG
                     FNLRIDNGEISFGRVIGQSHK"
     gene            8704..>9868
                     /locus_tag="VGA78_05000"
     CDS             8704..>9868
                     /locus_tag="VGA78_05000"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HEX9893256.1"
                     /translation="MLPIPVLTPQQAADWDRCAESAGISPATLMETAGRAAASLLAER
                     FAAGVRQGVLVAAGPGNNGGDGWVIARTLHRLGAPVWVAALPAAGGTLAAGVAERARS
                     EGVREVSVDGPWPAAGVLVDAILGTGASGAPRGAALGLMERLADLTLPLMAVDGPTGL
                     DLSDGVQHGGLQAHLTVTFGGYRRGHLLARDDVGDVVVVDIGFPPPDPSWPVLYTDHD
                     ATAALPRFRADMHKGDRGRVVVVGGSAGLTGAGRLAARAAFASGAGLVHLVSPQSSVD
                     IFATAEPDLQTAVQAFDAPLSPAARAVLERADAVIVGPGLGLHPERHRLVGEVLALSK
                     TAVVDADALSAFAGNAGALTEAVRGRPVVLTPHLGEFRGLVPDLAAGAAVDPWQ"
BASE COUNT         1528 a         3191 c         3466 g         1683 t
ORIGIN      
        1 cagcgtgcgc gagctgccgc ggggcaccac cggccagcag ctggcgggtc aaatcgggcc
       61 gggcctggcc aaagcggcgc tggccatccg ggtcgatgga gagatccgcg acctgggccg
      121 tcccatcacc caatccgcca aaatctcgat cctcaccgat cgcgatcccg acgccctcgg
      181 cgtactgcgg cattccgccg cgcacgtgct ggccacggcg gtccgggaga ttttccccgg
      241 cgccggcatc ggtttcggac ccgccatcga ggatgggttt tattacgact tcgaggtgcc
      301 gcgtccgttc acgccggaag atctggaacg gatcgaagcc gggatgcggg aggtcgcaga
      361 gagggattac cccttcgtcc gggaggaagt gtcgcgcgac gatgcctatc gccgcttcgc
      421 cgacgacccg ctcaagctgg aacggatcac cgagctgggc gaggacgagg tgatctcgac
      481 ctacaccgac ggcccgttcg tggatctctg ccgggggccc cacgtcccct cgaccggccg
      541 gctcaagcat ttcaagctgc tctcgaccgc cggagcttac tggcggggtg acgagaagcg
      601 gcagatgctg cagcggatct acggaaccgc ctggttcaaa aaggaagatc tcgaggccta
      661 tctccaccgg ctggaggagg cccgcaagcg ggatcaccgg gtgctgggaa agcagctgga
      721 tctctactcg attcaggaag tggtcggccc cgggctcgcc ttctggcatc ccaagggggc
      781 ccggatcaag tggcttctga ctcgggcagt cgaagatgac aacatcgcgt cgggatatga
      841 gctggtctac accccgagca tcacccggga agagctgttc ctgatctcgg gtcacctgcc
      901 gctctacgcg gcgaatcagt atcccgccat gtcggccggc gccggcgaag ccgaggacgt
      961 gcgctatcgg gtgaagccga tgaactgccc gatgcactgc ctggtgtaca agagccagct
     1021 caggagctat cgcgatcttc cgctccgcct ctccgaggtg gctaacctcc accggaacga
     1081 gaaatccggg accctgcacg gcctgctccg ggtgcgggga ctctgcatgg acgacgccca
     1141 catcttctgc accgtcgatc aggcagaaga cgaaatcttc ctctgcctgg atcaggtgga
     1201 acggatcgtt aggcagccgt tcggattcga gctggacttc gagatctcca cccggccggc
     1261 ccaaaagctg ggcgaagacg ccgcctggaa ccaggccgag gcggtgctgc agggcgccct
     1321 ggaacggaag cagattccct tccggatcga tgccggcggc ggggcgttct acgggcccaa
     1381 gatcgacatc aagttcaagg atgcgatcgg ccgtttgtgg cagggaccca ccatccagct
     1441 cgacttccag atgccggaac ggttccagct ggagtacacc ggcggggaca acaagccgca
     1501 ccggcccgtg atgatccatc gagcgatcta tggcacactg gagcggttca tcgggctcct
     1561 gatcgagcac ttcgccggcg cctttccggt gtggctggcc cccgagcagg tgcgggtact
     1621 gcccatctcc gaccatcaga cggacgtcgc ccgggaggtg accgccaccc tcaagaccgg
     1681 aggtctgcgc gcggtgctcg atgccagcaa tgagacgctg agctatcgga tccgtcacgc
     1741 cgagctgatg aaggtcccgt atgtggccgt ggtggggcag cgggaagccg attccggcac
     1801 cgtggcggtg cgggtgaggg gagcggggaa caagcaggaa gtcatgcccc tcgatgcctt
     1861 tctccagcgg gtccaatccg aggtagccgg gcgagccctc gctccgtgac agcccccggg
     1921 ctggtccggg tcatcggcac gggcgccttc gccctcacca tcatcaattc cattgtcggc
     1981 tcgggcatct tcggcctgcc ggcggccgcc gcggccatca tgggtccggc ggcggtgctg
     2041 ggctatgtgg gatgctcctt cctggtgggc ctggtggcgc tctgtttcgc ggagagcggg
     2101 agccgcctgc cggagaccgg cgggacctac gcctggtccc gggccgcctt cggtcccgcc
     2161 gtgggcgctt cggtaggcta cctgatggcc ttccccaacc tggcgggcgc caacgccgcc
     2221 gtcggggccc tgctggtcgc cagcctgcgg gccgcgttgc cgggcgtctc gccgatggtg
     2281 ccggcggctc ttgtggcggt cgtgtatctc agttttgcgc tgaccaacat ccggagtgtc
     2341 gcggccgggg cctggacctc ggcgaccctg gtcgtcatca agctggttcc cctgctggtg
     2401 ctggtggtcg cggggatcgg cttcattcag accgagaatc tgagatggcc caccgccccc
     2461 tcggccggta cgctgggaca ggggatggtg ctgctcttct tcgccttcat gggatcggaa
     2521 ggaccgctct ctaccatcgg cgaggtgcgc cgccccagcc gtaccattcc acgggcgctg
     2581 gcgctggcgg tgttaggcac cggaaccctg tatctggggg tgcagctggt ggcgcagggt
     2641 gtgctgggcc cccggctggc tcaggccagc gatgccccgc tggcggaggc ggcagcgatc
     2701 gtgttcggcc cggtgggccg cacctttctg ctctgggccg caatcatttc gaccaccggg
     2761 ttcatcagct cggatgttct gaacggtccc cggatgctgt tcgcgctggg caatgcccgg
     2821 ctgcttccct cgatcttcgg ccgggtccat cctcaatttc atacgccgta catcgccatc
     2881 gtggcgtacg tcctcctgtg cggcggactg gcgatcaccg ggactttccg gcagctggcg
     2941 gtgttcgcgg ccgccggtac cctggcgatc tacctggtca gcgtcctggg cctgctccgg
     3001 atcaggcggc tgggtttgcg cgcaaccgat gcgccgttcg tggtgccagg cggcccggtc
     3061 gtgccggtga ccgcggcggt gatcctggtc gggctgttgg cctcactgac cggccaggaa
     3121 gtgctcgcca ccctcggtct ggcagtggcc ggcctggtcg tgggcctggt ccgatcgcgg
     3181 gtctgagtgg ggccgggtgc tcggaacaac gcctctcctc ggttattttt tgcgcagttc
     3241 agcatccaaa gagaccagaa agtgtctgat ttaactactc cagtcatcgt ttccgcctgc
     3301 cgcactccga tcggcaagta cctgggcggt ctctcctcct tcgccgcacc acagctcggg
     3361 gccatcgcca tccgggaggc cgtccggcgc gccggcatcg acgccggggt ggtggacgaa
     3421 gtcatcatgg gccacgtgct gcagggaggg tcggggcagg cgccggggcg gcaggccgcg
     3481 atccaggcgg ggctccccgg catcattccc tcgctcacca tcaacaaagt ctgcggctcg
     3541 gggctcaagg cggtgatgct cgcgtcccaa gccatcaagg cgggtgatgc ggagtgcgtg
     3601 gtggccggcg gcatggaggc catgtcggcc tccccccatt acctctacgg ctatcgcaac
     3661 gggatcaagg cgggcaacca gaccatcgtc gacgggatga tccacgacgg gctgtgggat
     3721 tcgttcggta ccacccacat gggcggctac gccgaataca ccgcgcaaaa ggccggggtg
     3781 acgcgacagg aacaggacga gttcgcctat cacagtcacc ggaaagcggt cgcggccatc
     3841 gagtcgtgta agttctcgca ggagatcgtc ccggtcgagg tggcgaccaa gggcggcgtc
     3901 accaacgtga ccaccgacga gtctccccgc aaagagacct ctgttgaggc actcgccaag
     3961 ctcaagccgg cttttcagaa ggacggcagc gtgaccgccg gcaacgcgcc cggcctcaac
     4021 gatggcgcca gcgcgctggt ggtgacgtcg ctggctttcg ccaaggcgca cgggctcacg
     4081 ccgctcgcca aggtgacggc ctacgccacc ggcgggggcg agcccaagga cctcttcttt
     4141 gcgccgatca tcgcggtgga gaacctgctg gccaaggcgg gcaccaccat caatgattac
     4201 gagctgatcg aggccaacga ggcattcgcg gtgcaggcga tcgccgatgg gcgggcgctc
     4261 aaatgggact gggatcgggt gaacgtcaac ggcggcgcta tcgcgctggg acatccgatc
     4321 ggggccagcg gcgcccgggt gctcaccacg ctgctctacg ccatgcggga ccggggcaag
     4381 cgcaccggac tcgcgacctt gtgtctgggc ggtggcaacg ccgtcgccct ctcggtcgaa
     4441 gcgctgtgac gcggacgaag gcggtcggac tctcgaccgc cttcctcgtg tccggcttcg
     4501 ccgtcggtta cagtctcatc ggggcaatcg ggaccttgct gtggcgggac gaaatgccgg
     4561 ggctgacgga ggccgcggcg gttcagtcgg ccgtgctgct gcccgtcttt gccctcgcta
     4621 cctggatctt cgggattcgc ctggcccggc tgggcccgac cgagctccgg tggcgaggcc
     4681 ggcccggcga tagtctgcgg ggtcttgcga tcggcgcggt accggccgcg atcgttatgc
     4741 tggccgcggt gccgctggca ggcgccgggt ggtcccgcga tggcggctcg tttgtcgcct
     4801 ggctcggcac cctgccgggg ctcattctgg ttctgtttcc ggcggcgctg ctggaggagg
     4861 tcatcttccg gggcgtaccg ctggtgctgc tggcggcggc gttcggccgc ccggcggccc
     4921 tggtggtcac ggccacgctc ttcgggctgt tgcacgcgct gaaccccgat gtcactccgc
     4981 tggcgatcgg gaacgtggcg ctggcgggcg tgttcctcgg cgtcgcgttc tatctccccg
     5041 gcggtctctg gaccgcgacc ggggctcacc tggggtggaa cctcacccac gccgtgctgg
     5101 cggccccggt aagcgggctg ccgttcacca tgccgtggct ggactaccgg ccgggcgggc
     5161 cggcctggct ctcgggcggg agcttcggac ccgaaggcgg catcctcgcg accgtggtgc
     5221 tggccgtcac ggtagctctg gccgcgcggt acatcgaacc caaccaggag tccttcgcat
     5281 gaatcgcgtc gccgtcatcg gcgcgggcac catgggcaac ggcatcgcgc acgtcttcgc
     5341 gcagcatggc acgagcgtca cgctgatcga cgtgcggcag gaggcgctcg accagggact
     5401 cgcgaccatc cgcggcaacc tggaccgcca ggtgaagaag ggcaccatcg cggccgaagc
     5461 gccggccgag attctggggc ggatttcgcc cagcaccagc ctggagtcgg cggcgggcgc
     5521 ggggctggtg gtcgaggcgg ccaccgagaa cccgaccctc aagtactcga tcttcgaaac
     5581 cctggatcgg gtggtgggac cggaggtgat cctggccagc aacaccagct ccatcagcat
     5641 caccgagatc gcggccaaga cccaacggcc ggacaaggtg atcgggatgc acttcatgaa
     5701 tccggtcccg gtgatgcagt tggtggaggt gatccggggc cacgccacca gcgacgagac
     5761 cacccgcagc gtgctccaga ccgcggcggc gttaggcaag acgccggtgg aggtgaacga
     5821 ctatcccggc ttcatcgcca accggatcct gatgccgatg atcaacgagg cggtgtactg
     5881 cgtgatggaa ggggtggccc agccggaggc gatcgacacg gtcatgaaac tggggatgaa
     5941 ccatcccatg ggcccgctca ccctggcgga cttcatcggg ctggacgtct gcctcgcgat
     6001 tctcgaagtg atgcaccagg gcctgggcga tccgaaatac cggccctgcc cgctgctgcg
     6061 tcgaatggtg gcggcggggc acctggggcg gaaggcgggg cggggctttt acacctatta
     6121 gcgattgacg attgacgatt gcttccgcga gatggtcata acgcaatcgt caatcgtcaa
     6181 tcatcattcg gcaataaggc gcggctgtcg aagatgtgga tgccggggtg atcgttagtc
     6241 actagtggct aatgtcaggt gacttagatt aggtggcaga tgcccgaaaa catccccatc
     6301 ggctccgacc acgccggctt ccagctcaag gagcggctca aggaggagct tcgccggatg
     6361 gggtatgccg tggaggacgt tggcacggat tcagcatcct cggtcgacta cccggacttt
     6421 gcccacccgg tggcgacgcg ggtcgagcgg ggggacgcga aacgcggcgt cctgctgtgc
     6481 ggtaccgggc tgggcatgtc ctacgccgcc aaccggcacc acggggtccg tgcggccgtg
     6541 gcctggaccc ccgaaattgc ccggctggct cgcgagcata acgacgccaa cgtcctggtt
     6601 ctccctgccc gtttcgtgag tgatgacgag gcggtcgtca tcctgcggac ctggctggag
     6661 acccccttcg agggcgggcg gcacggtcgc cgagtagaga aaatcgaacc ggagagtgca
     6721 tgaatttgga ccacggggcg ccgctccgtg ccgtcgatcc tgagatcgcg gccctcgccg
     6781 atcgcgaggt ggagcgccaa cgcaatgggc tcgagctgat cgcgagcgag aacttcgcct
     6841 cgcgggcggt actcgaggcc atggccacgg cgctcaacaa caagtacgcg gaggggtacc
     6901 cgggccggcg ctattacggc ggctgtgagg tggtggacct ggtcgagcgg ttggccatcg
     6961 agcgggccaa acggctgttc ggggcggaac acgccaacgt ccagccgcac gccggggccc
     7021 aggccaattt cgccgccttc atggcggtgc ttccgcccgg cggaaccctg ctggcgatgg
     7081 cgctgccgca cggcgggcac ctttcccacg ggtccccggc caaccacagc ggcatcatct
     7141 ggcgcgccac ccactatggc gtggatccgg ccacggggcg gatcgattac aaccgggtcc
     7201 gggagatcgc caaggcggag cgacccggcc tgatcgtggc cggcgggagc gcctacgccc
     7261 ggatcatcga cttcgccgcc tttcgctcga tcgccgacga ggtgggggcg ctgctgctgg
     7321 tggatatggc gcactttgcg gggttggtgg ccggcggggt ctatccgtcg ccggttcccc
     7381 atgcccagct ggtgacgagc accacccaca agacattgcg gggaccgcgc ggaggcatca
     7441 ttctctccat tgagtccctg gccaaaccgg tggacaagtc ggtcttccca ggccatcagg
     7501 gcgggccgtt ggagcatgtg atcgcggcga aggcggtcgc cttccacgaa gcgctgaccg
     7561 acgatttcag gacctacgcc cgtcaaaccg tcgccaacgc ccggacgctg gcgaacgggc
     7621 tcatggctcg cgggtttgcg atcgtgtccg gcgggactga ttgtcatctg ctgaccgtgg
     7681 atttgcggcc caagggcctt accgggaaag aagccgaagc gatcctgggc cgggcgggga
     7741 ttaccgtcaa caagaacacc gtccccgacg atccccagtc gcccttcgtg accagcggcg
     7801 tccggttagg caccccggcc ctgaccaccc gggggatggc cgaggccgaa atggaccaaa
     7861 tcgccgagct gatcaatcgg gcgttgaccc ggccggacga cgcgctgctg gaacgcatcc
     7921 ggggcgaagt cgaggtgctg gccggcggat tcccactgta cgcggaggaa ccgaccgtgg
     7981 gtgcaggaac cgcggaatga accaggtacg gctggcggaa gagctgctgg agcggatcca
     8041 cgcgcgcgag acccgctacg cggagcaggc ctatctcttc gtgctggcga gcatcgagta
     8101 tctccagacc cggctgccga tgcggcgaca cgtgtcgggg caggaactgg ccggtgcggt
     8161 ccgggattat gcccgggagc agttcggact gctggcctgg gcggtgttgg aacactgggg
     8221 tgtggtggag acgctggacg tggggcggat cgtctacacc ctggtggatg tggggttgct
     8281 catcacccgg ccggaagacc ggctggaaga cttcgatcgc gttttcgagt tccgctccgc
     8341 gttcgacgac tggagttacg tctgggaggg agtacccggg ccggggggcg gcgccagccg
     8401 cagggaggtg acgtgatcga tgggcgtgac tggccgggat gcctcaagtg cgacaagggt
     8461 cgcctgattc ctctctccga ctacggccgc gacggcgcgc cgatcaccta caaggcatgg
     8521 gtctgcacca accccgaatg cggtttcaat ctccggatcg acaacgggga aatcagtttc
     8581 gggcgggtga tagggcagtc acacaaatga ccttgacgat tgacgattga cgattgacga
     8641 ttgctcggca gatgcgcgag cggcagtcgt caatcgtcaa ccgtcaatcg tcaatggcct
     8701 cacatgcttc ccattccagt cctcacccct caacaggccg cagactggga tcgttgcgcc
     8761 gagtccgccg gtatttcccc tgccaccttg atggagaccg ccggccgggc cgcggcgtcg
     8821 ctcctggccg aacgattcgc cgccggggtg cgacaaggcg tcctggtggc ggcgggaccg
     8881 ggcaacaacg gtggcgatgg ttgggtcatt gcccggaccc tgcaccggct cggcgccccg
     8941 gtctgggtcg cggccctgcc ggcggcggga ggaaccctcg cggccggtgt ggccgagcgg
     9001 gcccggtcgg agggtgtccg cgaggtctcg gtcgatgggc cctggcccgc ggccggcgta
     9061 ctggtcgatg ccatcctcgg caccggcgcc tcgggggcgc cgcgcggcgc ggcgctgggg
     9121 ctgatggagc gtctggccga tctgaccctc ccgctgatgg cggtcgacgg acccaccggg
     9181 ctcgatctgt ccgacggggt acagcatggc gggctccagg cgcacctgac tgttaccttc
     9241 ggcgggtatc gccgtggtca tctcctggcg cgggatgacg tcggcgatgt ggtggtggtc
     9301 gatatcggtt ttccgccccc agatccttcc tggcccgtcc tctacaccga tcacgatgcg
     9361 acagccgccc tgccgcggtt tcgggccgac atgcacaagg gcgaccgcgg gcgagtcgtc
     9421 gtagtgggcg ggagcgccgg tctcaccggg gcagggcggc tggccgcgcg ggcggcgttc
     9481 gcgtcggggg ccggtctggt tcacctggtg tcgccccaaa gctcggtcga catcttcgcc
     9541 accgcggagc cggatctgca gactgcggta caggcctttg acgcccctct gagcccggcg
     9601 gcccgagcgg tgctggagcg agccgacgcg gtgatcgtgg gcccgggcct gggactccat
     9661 cccgagcgcc accggctggt gggggaggtg ctcgcgctgt cgaaaaccgc ggtggtcgat
     9721 gccgatgcct tgtccgcctt cgcggggaac gcaggcgcct tgaccgaggc ggtgcggggg
     9781 aggccggtgg tgctcactcc ccacttgggt gaattccggg ggctggtgcc cgatctggcc
     9841 gcgggcgcgg ctgtcgatcc ctggcagg
//
LOCUS       DASWKS010000168         3358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3047767, whole genome shotgun sequence.
ACCESSION   DASWKS010000168 DASWKS010000000
VERSION     DASWKS010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3047767"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(225..1244)
                     /locus_tag="VGA78_05005"
     CDS             complement(225..1244)
                     /locus_tag="VGA78_05005"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9893257.1"
                     /translation="MTLRVGLIGVGRMGNVLARHLVNSVPEASLIAIADLDRARAEAL
                     AERYGAEAAYSDPEQLLARPDLEAVLIVTPTDTHPELVEAAARAGKHVLVEKPLALTL
                     EGCDRAIAAAAAAGVKLQVGFMRRFDRAYREAKSKIEQGEIGRPTLFKSINRDPVRTS
                     LEFARRDSSGGLIMDLGIHDFDLAGWMMGREVVRVSSEGARLAYPELSEAGDIDNAVI
                     NLRFQDGAVGNVDLSRNAVYGFDSRTEVLGTKGAVVVGRQRESDLMLFAPQGSAPPTS
                     AGRFDSAYVEEIRHFVDCVAHDRSPVMTGEEARLASAIAIAATLSLDQGRPVELSELA
                     AAEPG"
     gene            complement(1263..3140)
                     /gene="iolD"
                     /locus_tag="VGA78_05010"
     CDS             complement(1263..3140)
                     /gene="iolD"
                     /locus_tag="VGA78_05010"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR04377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016823 - hydrolase activity, acting on
                     acid carbon-carbon bonds, in ketonic substances [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019310 - inositol catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HEX9893258.1"
                     /translation="MATIRLTMAQAVIRFLKNQFVERDGRQQPFFAGCWGIFGHGNVA
                     GIGQALQENPDFRYYQARNEQAMVHVAAGFAKMSDRLRSFACTSSIGPGATNMLTAAA
                     GATINRLPVLLLPGDIFARRNVAPVLQQLEQPYTQDISVNDCFRPISRYWDRIHRPDQ
                     ILTALPEAMRVLTSPAETGAVTLSLPQDVQIEAYDYPLELFEKRVWQVPRPRPDAVLL
                     AQAAAWIRASRAPLIIAGGGVIYSQATQALEGMAGRTGIPVAETQAGKGALPYNHPMS
                     LGAMGVTGTPGANRLAREADLVIGVGTRYSDFTTASKTAFQNPAVRFINLNIAEFDAH
                     KHSALPLVADARAGLEELAVALGPYQVPDEHRARASEFNREWDREVARLYGLEHGPPI
                     SQSEVIGAVNRAAGPRDVVVCAAGSLPGELHKLWRSRDPKSYHLEYGYSCMGYEIAGG
                     LGVKMAAPDREVYVLVGDGSYLMMNSEIVTSVQEGYKLTIVLVDNHGFSSIGGLSQSV
                     GSGGFGTQYRYRNPQTGQLDGERLPIDFAASARSLGAHAIQAHDLPSLQAALEQAKAH
                     DRTTVVVIETDPEQRVPGYESWWDVPVAEVAEMESVRAAREAYVRALGRERPLSAGRA
                     G"
     gene            complement(3144..>3358)
                     /locus_tag="VGA78_05015"
     CDS             complement(3144..>3358)
                     /locus_tag="VGA78_05015"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX9893259.1"
                     /translation="GFPVEVYNVLGAGDAFASGLIYGTSKGWDWYKSARMGNACGAII
                     VTRHGCANFMPYEHEALEFVEQHGGF"
BASE COUNT          540 a         1184 c         1059 g          575 t
ORIGIN      
        1 gcggcctgca ccgcccggtc gacctcctcc gcggtggaga ggccaaccct ggccagcacc
       61 tcgccggtcg ccgggttgag cacattcaac gtctcggagg cggccggctg tcgccagcta
      121 ccgccgatgt aattccgggc cgcttccatc ctcactcact cctcccggcc atccaccggc
      181 cgccggcggc cgggccggct gggttcccgg cgcggctccc gcgcctaacc gggttcggca
      241 gccgccagct cgctgagctc gaccgggcgc ccctgatcga gcgagagggt agccgcgatc
      301 gcgatggcgc ttgccaggcg ggcctcctcc ccggtcatca ccgggctgcg gtcgtgggca
      361 acgcaatcga cgaagtgccg gatctcttca acatacgccg agtcgaaacg ccccgcactc
      421 gtcggcgggg ccgacccttg gggagcgaac agcatcaggt ccgactcgcg ctgcctgccg
      481 accaccaccg cgcctttggt ccccagcacc tcggtccgcg aatcgaaacc atataccgcg
      541 ttgcggctca gatcgacgtt tccgactgcc ccgtcctgga agcgcaggtt gatcaccgca
      601 ttatcgatgt ccccggcttc gctcagctct ggataagcca ggcgggcccc ctcgctcgac
      661 acccgcacga cctccctccc catcatccag cccgccaggt cgaagtcgtg gatccccagg
      721 tccatgatca ggccgccgct cgaatcgcgg cgggcgaact ccagagaggt gcgcaccgga
      781 tctcggttga tcgacttaaa taacgtcggg cgcccgatct ccccctgctc aatcttactc
      841 ttggcttctc ggtaagcccg gtcgaaacgg cgcatgaagc ctacctgaag cttcaccccg
      901 gcggccgccg cggccgcgat cgcccggtcg cagccctcca gggtgagggc cagcggcttt
      961 tcgaccagga catgcttgcc ggcccgggcg gcggcctcca ccagctctgg atgggtatcg
     1021 gtgggagtga cgatcaggac cgcctccagg tccggacggg ccaacaactg ctctggatcg
     1081 gagtaggcgg cttcggcgcc gtatcgctca gccagggctt ccgccctcgc ccggtcgagg
     1141 tctgcgattg cgatcaggct cgcctccggt acgctattga ccaggtggcg cgccagcacg
     1201 tttcccatcc gtccgacccc gatcagcccg acccgaaggg tcatgctcgc cggccggccc
     1261 ggtcacccgg cacggcccgc ggacaggggt cgttcccgac cgagagcgcg cacataagcc
     1321 tcccgggcgg cccggacgct ttccatttcg gcgacctcag cgaccggaac gtcccaccag
     1381 gattcatatc ccggcaccct ctgttccgga tcggtctcga tcaccaccac cgtcgtccgg
     1441 tcgtgggcct tagcctgctc gagggctgcc tgcagtgatg gcaggtcgtg ggcctggatc
     1501 gcgtgggctc ccaagctgcg ggcactggcc gcgaaatcga tcggcagcct ctcaccgtcc
     1561 aactggccgg tctgcgggtt gcggtaacgg tattgagtcc caaatccgcc gctgccgacc
     1621 gattgagaga gcccgccgat gctcgagaag ccgtggttgt ccaccaggac gatggttagc
     1681 ttgtagcctt cttgcacgga agtgacgatc tccgagttca tcatcaggta gctcccgtcg
     1741 ccgaccagca cgtagacctc ccgatcaggc gcggccatct tcacacccag gccaccggca
     1801 atctcgtatc ccatacacga gtagccgtat tcgagatgat agcttttcgg atcgcggctg
     1861 cgccacaact tgtgcagttc gccgggcagg ctccccgccg cacagaccac cacatcccgc
     1921 ggtccggccg cccggttgac cgccccgatc acctcgctct ggctgatcgg cggcccgtgt
     1981 tccagcccat acagccgggc gacctcccgg tcccattcac gattgaactc cgaagctcgg
     2041 gcccggtgct cgtccggtac ctggtagggc cccagggcga ccgccagctc ctcaaggccg
     2101 gcccgggcat cggctaccaa cgggagggcg gagtgcttat gggcatcgaa ctcggcgatg
     2161 ttgagattga tgaagcggac cgccgggttc tggaaggcgg tcttcgacgc ggtggtgaaa
     2221 tcgctgtagc gggtgccgac tccgatcacc aggtcggcct cccgggccaa ccggttggcg
     2281 cccggggttc cggtcacacc catcgctccc agcgacatcg ggtggttgta aggaagggcg
     2341 cccttgcccg cctgagtctc ggcgaccggg atccccgtcc gcccggccat gccctccagg
     2401 gcctgggtgg cctggctgta gattaccccg ccgccggcga tgatcagtgg ggcccggctc
     2461 gctcggatcc aggccgcggc ctgcgccagc agaactgcgt ccggacgcgg tcgggggacc
     2521 tgccagaccc gcttttcaaa cagctcgagc gggtagtcat aggcctcgat ctgcacatct
     2581 tgtggtagcg acaacgtgac tgcgccggtc tcggccgggg aggtcagtac ccgcatcgcc
     2641 tccgggagag cggtaaggat ctgatcgggg cggtggatcc gatcccagta gcgggagatc
     2701 ggccggaagc agtcgttgac cgagatgtct tgggtatacg gttgttcgag ctgctgcagg
     2761 accggcgcca cattgcgccg ggcgaagatg tcgccaggca gcagcagcac cggcagacgg
     2821 ttgattgtgg ccccggcggc ggcggtgagc atgttggtgg ccccggggcc gatcgagctg
     2881 gtacaggcga agctgcgcag ccgatcgctc atcttggcga agccggccgc gacgtgcacc
     2941 atcgcctgct cgttgcgagc ctggtagtag cgaaaatccg ggttctcctg cagcgcctgg
     3001 ccgatgccgg ccacgttgcc atggccaaag attccccagc aacctgcgaa gaacggctgc
     3061 tgccggccgt cccgctcgac gaactggttc ttcaggaatc ggattacggc ctgggccatg
     3121 gttagccgaa tggtagccat ccgttagaac cctccgtgct gttccacgaa ctcgagcgcc
     3181 tcgtgctcat agggcatgaa attggcgcac ccatggcgag tgacgatgat ggccccgcag
     3241 gcgttgccca tccgggccga cttgtaccag tcccacccct ttgaggtccc gtagatcaga
     3301 ccgctggcaa aggcgtcccc ggcacccaac acgttataga cctcgaccgg gaagcccg
//
LOCUS       DASWKS010000169         3740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_451386, whole genome shotgun sequence.
ACCESSION   DASWKS010000169 DASWKS010000000
VERSION     DASWKS010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451386"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VGA78_05020"
     CDS             complement(<1..721)
                     /locus_tag="VGA78_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893260.1"
                     /translation="MSTRTVEMSLATPGLDPEGRPRRIPLGVPEPSRLDRPESGEDHM
                     LINLGPQHPATHGVLRLVIELEGEVVRRVVPHLGYLHSGFEKLGEYRHYHQIIPLTDR
                     TDYLSPMANNVGLALAAEKLMGIRITERCQVLRVIACELSRIISHLVWLGTTGIDLGA
                     FTPFLWSFQERERIYNLQEMWTGARLTTSLTRVGGLMADIPDGFEAGLREFTRTFPDT
                     LREVDTMFTRNAIWIGRTQGVG"
     gene            complement(718..1335)
                     /locus_tag="VGA78_05025"
     CDS             complement(718..1335)
                     /locus_tag="VGA78_05025"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX9893261.1"
                     /translation="MTGEQATVAALAERFGPDLLRVTESCGDTIVSVRRERARVILAW
                     LKDDPGQGFDYLTDVTAVDYRDPELPLEVVYQLRSLARKVDLRVKIPLDKKQDLVVDS
                     VVNLWQGADWLEREVFDMFGVKFTGHPDLRRILMWETYSEGFPLRKDFPLRGHFSRAE
                     QTRQALAGNPEAHYSLEELSIAEAFGDIPEDMRERLDRGERGEIR"
     gene            complement(1332..1925)
                     /locus_tag="VGA78_05030"
     CDS             complement(1332..1925)
                     /locus_tag="VGA78_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEX9893262.1"
                     /translation="MAAAEVAAVSPNFITTRLDAVANWARTGSLWPMPFGTACCAIEF
                     MATAAGRYDLARFGMERMAFSPRQSDVLICAGRLPFKLAPVIRRIWDQMTQPKWSISM
                     GACASTGGVFDNYAMVQGIDTIIPVDVYVPGCPPRPEGLIYGIMLLQKKIRGESISDP
                     SLRVEQLVGPDGLFLPADRIDEISEPFGNSVHQTRSA"
     gene            complement(1958..2323)
                     /locus_tag="VGA78_05035"
     CDS             complement(1958..2323)
                     /locus_tag="VGA78_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX9893263.1"
                     /translation="MLRPYIPIVILTLFVVANAVLLVGLSHFLSNTRRTAPKDTPYES
                     GMPVLGTGHERFSFKFYLVAMLFIIFDIETVFMIPWAAGFRQLKGITGLLVVEMFLFV
                     VILAVGYVYVWKRGALEWD"
     gene            2688..3266
                     /gene="dcd"
                     /locus_tag="VGA78_05040"
     CDS             2688..3266
                     /gene="dcd"
                     /locus_tag="VGA78_05040"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEX9893264.1"
                     /translation="MSIKSDRWIRRMALEHAMIEPYIDNQVRQLDNRGRKVISYGVSS
                     YGYDMRVAPEFKIFTNVLSAVVDPKDFDAKSFVEYEGEVCIVPPNSFALARSVEYFRI
                     PRNVLTICVGKSTYARCGIITNVTPFEPEWEGHVTLEISNTTPLPARIYANEGICQVL
                     FFEADADDICETSYKDKAGKYQSQRGVTLPRL"
     gene            3420..>3740
                     /locus_tag="VGA78_05045"
     CDS             3420..>3740
                     /locus_tag="VGA78_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893265.1"
                     /translation="MPIRPGGLANDTPPAGSLREAASDNIGAEVTLVIEAPAFTLTTL
                     HQPGLYGPAGPVELRDPRALALLVMLGVAEGTVNHSDLLLRLAPDQTPAAARRTLDRL
                     IEELN"
BASE COUNT          693 a         1272 c         1186 g          589 t
ORIGIN      
        1 cgcccacgcc ctgggtacgc ccgatccaga tggcgttgcg ggtgaacatc gtgtccacct
       61 cgcgcagcgt gtccggaaag gtgcgggtga actcccggag accggcctcg aacccatcgg
      121 ggatgtccgc catgaggccg cccacccgtg tcaggctggt ggtgagccgc gcgccggtcc
      181 acatctcctg caggttgtag atccgctccc gctcctggaa cgaccagagg aacggcgtga
      241 aggcgcccag atcgatcccg gtcgtgccga gccataccag gtgggagatg atccgcgaca
      301 gttcgcaggc gatcacccgg agcacctggc agcgctcggt gatccggatc cccatcagtt
      361 tctcggccgc cagcgccagg cccacgttgt tggccatggg cgacaggtaa tcggtccggt
      421 cggtgagcgg aatgatctgg tggtaatgcc ggtactcgcc cagcttctcg aagcccgagt
      481 gcagataccc caggtggggc accacccgcc ggaccacttc cccttccagc tcgatcacca
      541 gccggagcac gccgtgggtg gcgggatgct gcgggcccag gttgatgagc atgtggtctt
      601 cgcccgactc gggccggtcc agtcgggacg gctccggcac ccccagcggg atgcggcggg
      661 gccggccttc ggggtccagc ccgggagtcg cgagcgacat ctcgacggtg cgggtgctca
      721 tcggatctcg ccccgctcgc cccggtcgag ccgctcccgc atgtcttccg ggatatcccc
      781 gaaggcttcg gcgatcgaaa gctcttccag cgaatagtgg gcctcgggat tgccggccag
      841 cgcctgccgg gtctgctcgg ctcggctgaa gtgaccccgc agcgggaagt ccttccgcag
      901 cgggaagccc tcggaatagg tctcccacat gagaatgcgc cgcagatcgg gatgcccggt
      961 gaacttcacg ccgaacatgt cgaacacctc gcgctccagc cagtcggccc cctgccagag
     1021 attcaccacc gagtccacca ccaggtcctg cttcttgtcg agggggatct tcacccggag
     1081 gtcgaccttg cgcgccagtg agcggagctg gtagaccacc tcgaggggca gctcgggatc
     1141 gcggtagtcc accgcggtca catcggtgag atagtcgaag ccttggccgg gatcatcctt
     1201 gagccaggcc aggatgaccc gggcccgctc ccggcgcacc gacacgatgg tatcgccgca
     1261 ggactccgtg acccgaagca ggtccggtcc gaagcgctcg gccagcgcgg ccaccgtcgc
     1321 ctgctcaccg gtcatgccga gcgggtctgg tggaccgagt tgccgaacgg ctcggagatc
     1381 tcgtcgatgc ggtcggccgg caggaacaga ccgtccggac cgaccaactg ctcaacccgg
     1441 agcgaaggat cgctgatgct ctcgccccgg atctttttct ggagcagcat gatcccgtag
     1501 atcaggcctt cgggccgggg cggacatccc gggacgtaaa cgtcgaccgg gatgatggtg
     1561 tcgatgccct gcaccatcgc gtaattgtcg aacacgccgc cggtcgacgc gcaggcaccc
     1621 atcgagatgg accacttggg ctgggtcatc tggtcccaga tccgccggat gactggagcc
     1681 agcttgaagg gcagccggcc ggcgcagatc agcacatccg attgccgggg cgagaaggcc
     1741 attcgctcca tgccgaaccg ggccagatcg taccgaccgg cggcggtcgc catgaactcg
     1801 atggcgcagc aggcggtgcc gaacggcatg ggccagagcg aaccggtccg ggcccagttg
     1861 gcgaccgcgt ccagcctggt ggtgatgaag ttgggcgaca ccgcggccac ctccgcggca
     1921 gccacctccg cctccacggg cgtccgggtc cgtttgatca atcccattcc agggcgcctc
     1981 gcttccacac gtacacgtag ccgaccgcga ggatgaccac gaacaggaac atctcgacca
     2041 ccagcagacc agtgatgccc ttgagctgcc gaaaccccgc cgcccaggga atcatgaaaa
     2101 cggtctcgat gtcgaagatg atgaacagca tggccaccag gtagaacttg aaggaaaagc
     2161 gctcgtgccc ggtaccgagg acgggcatgc ccgattcgta aggcgtgtcc ttcggggccg
     2221 tgcgcctggt attggacagg aaatgcgaca gcccgaccag caggaccgcg ttcgccacca
     2281 cgaacagggt cagaatcacg atcgggatgt acggtcggag catcgagaga ctaggggaaa
     2341 gggtaaaccg acatccgaca actacaggtg cataaggata aaccgcgagg ggggctcgtt
     2401 caacccgcga acatgggggg caaaccgcga tggcaattgc agttatggcg acgattcggt
     2461 cacccctcac acgccggccg gggcgcggcg aggggtgacg cgggtcgtgg gccggccgca
     2521 gggccggtcc tgacacaagg gaagacgggc cacgccgcca ccagcaacgc gaccgcggct
     2581 tgcttcgaag gcctcatgac cgactccagg ttgaagcgga ccgccgcgac cggcgggtct
     2641 caggctgggt cgcatggcta tatttgccca actcctaccg cgcactcatg agcatcaagt
     2701 cagatcgctg gatccgccgc atggcgctcg aacacgcgat gatcgagccc tacatcgaca
     2761 accaggtccg ccagctggac aaccgcggcc gcaaggtcat ctcctacggg gtctcctcct
     2821 acggctacga catgcgggtg gcgcccgagt tcaagatttt caccaacgtg ctctccgccg
     2881 tggtggaccc caaggacttc gatgccaaga gcttcgtcga gtacgaaggc gaggtctgca
     2941 tcgtcccgcc caacagcttt gccctggccc ggagcgtcga gtacttccgg atcccgcgca
     3001 acgtgctgac catctgcgtc ggcaagagca cctatgcccg ctgcgggatc atcaccaacg
     3061 tcacgccctt cgaacccgag tgggaaggcc acgtgacgct cgagatcagt aacacgactc
     3121 ccctgccggc ccggatctac gccaacgaag gcatctgcca ggtgctcttc ttcgaggccg
     3181 acgccgatga catctgcgag accagctaca aggacaaggc cggcaagtac cagtcgcagc
     3241 ggggagtgac gctgccccga ctgtagcgtc ctaccgacgc tgttgcccga cctcggcagc
     3301 ttttcagctg gaattcaaca ccccggaaac gatcggcgtc atcggcggca tcggcggata
     3361 accccctaac caattcatcg cggcctccca ttaccgatat gtggttcgca tgtgggccga
     3421 tgccgatccg ccctggcggg ctcgccaacg acacgccgcc ggctggctcg ctgcgcgagg
     3481 ccgccagcga taacattggg gcggaggtca ctctcgtgat cgaagccccc gccttcacac
     3541 tcaccacgct ccaccagccc ggactgtacg gtccggccgg gccggtcgag ctgcgcgacc
     3601 ctcgcgcgct cgccctgctc gtcatgctgg gtgtggccga aggcaccgtc aaccactccg
     3661 acctgctgct tcgactcgct cccgatcaga ccccggccgc ggcgcgccga accctcgatc
     3721 gtctgatcga ggagctcaac
//
LOCUS       DASWKS010000170         2674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1942916, whole genome shotgun sequence.
ACCESSION   DASWKS010000170 DASWKS010000000
VERSION     DASWKS010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1942916"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VGA78_05050"
     CDS             complement(<1..287)
                     /locus_tag="VGA78_05050"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX9893266.1"
                     /translation="MTAGSIARDWLSSLNPAQREAAEHVHGPILVLAGAGSGKTRVLT
                     VRLAKLIEEHGVPTERIFAVTFTNRAAAEMKERVGAMLGRDPHGLWIGTFHS"
     gene            complement(284..1564)
                     /gene="serS"
                     /locus_tag="VGA78_05055"
     CDS             complement(284..1564)
                     /gene="serS"
                     /locus_tag="VGA78_05055"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003218092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEX9893267.1"
                     /translation="MIDIKRLRQDPEAVRAALRRRLDPALEAMIDGLLDLDRRRRESL
                     VQVETLKAARNTASEEVARRKRSGESADDLMAELKRSGDQVKQLEARVRAIDAELEGL
                     LLRVPNLPHADLPDGDGSANPVLRSWGEPRRFEFQPRPHWELGETLGLFDLGRGTKLA
                     GSGFLLFTGAGARLVRALINFMLDLHTREHGYTEVCPPFVVNTATMTGTGQLPKFADD
                     LYSVPGDGLWLIPTAEVPLTNIHRDEILERDRLPAAFVAYTPCFRREAGAAGKDTRGL
                     LRMHQFDKVELVRLVSPETSEAEHALLTQQAETVLQRLGLPYRVVVLAAGDVGFAAAR
                     TYDLEVWASGVGAWLEASSSSTFTDYQARRLNLRYRPGAGAKPELVHTLNASGVALPR
                     TIAALLEHYQEADGSVRIPDALVPYLGANRLPAP"
     gene            complement(1571..2128)
                     /locus_tag="VGA78_05060"
     CDS             complement(1571..2128)
                     /locus_tag="VGA78_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893268.1"
                     /translation="MRPVGLTAVTAAVLAACSDANNLPDPVFTNVEDTVTVFAISGTE
                     VFQPSGYAMTERRAVRLDQSSSADIAFDITSDGRPVFLPGAMIGQPGTSGIDPGLQTT
                     TQEYDDIALAIVNGYRTLDTVAVDSGQVYFLRSRIPGSCFLGVPTYGKVEILGLDPAA
                     RTVVFKVLANLNCGYKSLLPGTPSQ"
     gene            2216..2563
                     /locus_tag="VGA78_05065"
     CDS             2216..2563
                     /locus_tag="VGA78_05065"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEX9893269.1"
                     /translation="MLRSLLDGLTNRPEVTGAAIVSGEGLLIDHLLPPGTDGDALAAL
                     AATVIRQVTELGSASRLGDPSTAILEFAGGPAILGMVDGGAALVVIARPDVDLGELLY
                     LVRRHRPAVADAL"
BASE COUNT          419 a          900 c          920 g          435 t
ORIGIN      
        1 gaatggaagg tcccgatcca gagcccgtgc ggatcgcgac ccagcatggc accgacccgt
       61 tccttcatct cggcggcggc gcggttggtg aaggtgaccg cgaagatccg ctcggtcggc
      121 acgccatgct cctcgatcag cttggcgagt cggaccgtga ggacccgggt ctttcccgat
      181 ccggccccgg ccaggaccag gatcggtccg tgaacgtgct ccgccgcttc ccgctgggcg
      241 gggttcagac tggagagcca gtcgcgggcg atggatcccg cggtcacgga gccggcagac
      301 gattggcgcc gaggtagggc accagggcgt caggaatccg gacggagccg tccgcctcct
      361 gatagtgctc gaggagcgcc gcgatggtcc gcgggagggc cacccccgag gcattcaggg
      421 tatggaccaa ctccggcttg gccccggcac ccgggcgata tcgcaggttg agacggcggg
      481 cctgatagtc ggtgaatgtg ctcgagctcg acgcttcgag ccaggcaccg acaccggagg
      541 cccacacctc caggtcgtag gtccgggcgg cggcaaaccc gacatccccg gctgccagga
      601 cgaccacccg atacggcagg cccagccgct gcagcacggt ttcggcctgc tgggtcagca
      661 gcgcgtgctc cgcttcggac gtctcgggcg acaccagcct gaccagttcc actttgtcga
      721 actgatgcat ccggaggagc ccgcgggtgt ccttcccggc tgcgcccgct tcccgccgga
      781 aacagggcgt gtaggccaca aaggccgccg ggagccgatc gcgctcgaga atctcgtcgc
      841 ggtgaatgtt ggtgagcggg acctcggcgg tgggaatgag ccagagcccg tcgcccggca
      901 cgctgtagag atcatcggcg aacttgggga gctggccggt gccggtcatc gtggccgtgt
      961 tcaccacgaa aggagggcat acctcggtgt agccgtgctc gcgggtgtgg aggtcgagca
     1021 tgaagttgat caacgctcgc accaggcgcg cgccggcccc ggtgaacagc aggaagcccg
     1081 acccggccag cttggttccc cgccccagat cgaacaagcc gagcgtttcg cccagttccc
     1141 aatggggcct gggctggaac tcgaagcggc ggggctcgcc ccaggagcgc aggaccggat
     1201 tggccgagcc atcgccgtca ggcagatcgg cgtgggggag gttcggcacc cgcagcagca
     1261 ggccctccag ctccgcgtcg atggcccgca cccgggcctc cagctgcttg acctgatcac
     1321 ccgaccgctt gagctcggcc atcaggtcat cggccgactc gcccgaccgc ttgcggcgcg
     1381 ccacctcttc cgaggcagta ttgcgggccg ccttgagcgt ctccacctgc accagcgact
     1441 cgcgccggcg ccggtccaga tcgagcagcc cgtcgatcat cgcctcgaga gccggatcga
     1501 gccggcggcg gagcgcagcg cgcaccgcct ccggatcctg gcggaggcgc ttgatgtcga
     1561 tcatggattg ttactggctg ggcgtgccgg gcagaagact cttgtaaccg caattcagat
     1621 tggccagcac cttgaagacc acggtgcggg ccgcgggatc gaggccgaga atctccacct
     1681 tgccgtaggt gggcacgccc aggaagcagc tgccggggat ccggctgcgc aggaaataca
     1741 cctggcccga atccaccgcc accgtgtcca gcgttcggta gccgttcacg atcgccagcg
     1801 cgatgtcgtc gtactcctgg gtcgtcgtct gcagccccgg atcgatcccg ctggttcccg
     1861 gctgtccgat catggcgccg gggaggaaga ccggccgccc gtcgctggta atatcgaagg
     1921 cgatgtcggc cgagctgctc tgatccagcc ggaccgctcg ccgttcggtc atggcatagc
     1981 cgctgggctg gaagacttcg gttccggaaa tggcgaacac cgtcaccgtg tcctcgacgt
     2041 tggtaaacac cgggtcgggc aggttgttag cgtcgctgca ggcggcgaga acggcggcgg
     2101 tgaccgcggt gagtcccact gggcgcatcg gcggaagatt aagagaccag ggaaggacgg
     2161 tcaacccacg gatttttctt gacttccgcc gttcggcggt cttagtgttt gggccgtgct
     2221 gcgctccctc ctcgacgggc tcaccaaccg acctgaagtc accggcgccg ccatcgtttc
     2281 cggcgaaggt ctgctgattg accacctgct tccgcccggc accgatggcg acgccctggc
     2341 ggcgctggcc gcgaccgtca tccgccaggt caccgagctg ggatccgcca gccgattggg
     2401 cgatcccagc accgcgatcc tcgagttcgc cggcgggccg gccatcctgg gcatggtgga
     2461 cggtggcgcc gcgctggtgg tgatcgcgcg gcccgatgtc gatctcggtg agctgctgta
     2521 tctggtcagg cggcaccggc ccgcggtggc cgacgcgctg tagcgccggc ctatggactg
     2581 ggtcgttatc ctcgcgggcg gatcgggcac ccggttctgg ccgctcagct cgccccggaa
     2641 tcccaagcaa ttgctgcctc tagcgggtcc tacg
//
LOCUS       DASWKS010000171         6370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2673493, whole genome shotgun sequence.
ACCESSION   DASWKS010000171 DASWKS010000000
VERSION     DASWKS010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2673493"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VGA78_05070"
     CDS             complement(<1..576)
                     /locus_tag="VGA78_05070"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX9893270.1"
                     /translation="MIPLLALVLLPALLALVAYLSRTASVRRALLLLGAGGHTAGVAL
                     LWFGRNQEAVVPGSWLQLDAMGLMVLTVVSLLFLACAIYAGAFLRLDHPRGGRVFISC
                     LLGFLAAATLVSLAHHLALFWIGMEATTLAMAPLIFHRRDRRSLEAVWKYLVLSSVGI
                     GLALFGTFFLAAAQIEGRPLLLEDLVRHAATL"
     gene            complement(573..1214)
                     /locus_tag="VGA78_05075"
     CDS             complement(573..1214)
                     /locus_tag="VGA78_05075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893271.1"
                     /translation="MGQPVHELLLLLVVLTNFWALGTSRLSATIRAVALQGVLLAGLP
                     LALYPGFSAHQIGLAAGTLLVKAVILPAFLLRAIREAAVRREMEPLIGFTASMLLGAG
                     ALAIAFSIGPRLPLPEVESEMLVPVALATVVIGLLVLTTRRKAVSQVVGYLILENGIY
                     VFGLSQVERVPFLVEAGVLLDIFVGVFIMGIVVFHINREFDSLDSARLTELRE"
     gene            complement(1219..2130)
                     /locus_tag="VGA78_05080"
     CDS             complement(1219..2130)
                     /locus_tag="VGA78_05080"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX9893272.1"
                     /translation="MSPFPWLTLLVVIGMAPALPGIANRIKSGLTGRRGAPILQLYRD
                     LAKLWRKDVVYSRTTTLIFRLAPVVLAATTLLAAGLLPLDGRNALIAFPGDLVAFAGL
                     LGLGRFLLVLAALDTGSSFEGMGASREVTIASFAEPALFLCFTVLVLSTGDLRLMGML
                     GQPLAAAWRAAAPSLVLAAASLFIITLAETCRVPVDDPLTHLELTMIHEVMVLDHSGP
                     DLALILYAGSLKMALFGSLIVAVLVPRGNLPQPLALVTLVAGLVLIAVAVGVVESVMA
                     RLRMNRVPQLLVAAGALAGFALILLLS"
     gene            complement(2127..4061)
                     /locus_tag="VGA78_05085"
     CDS             complement(2127..4061)
                     /locus_tag="VGA78_05085"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX9893273.1"
                     /translation="MTPLGAGLGVILVAGVGALVLQGRARLADAVFRWGVVLGSVTAI
                     WPAAALLVRAGGSPPGPGGGWYGLDPLSAWFLLIVLGVGAAAALYGIPYLAHDRGRRR
                     VGIAHLLLAILLVALSGVVTARTIIAFLTAWEVMAVSAWLLVIFESEKAEVRRAGFIY
                     LVLTHTSTIALFGMFAAWTGGAAGSSFADLAALAADSPSTPLILLLALIGFGIKAGMV
                     PVHFWLPGAHSAAPSHISALLSGVMLKAGIYGLLRVLVLLGPAPAWWGWTVLLLGLAS
                     AVLGVVWALAQHDLKRLLAYHSVENIGIILMGIGLGSLGATYQHPGLALLGFTGALLH
                     SLNHALFKSLLFLGAGVVGRVTGTLEIDRLGGLSRAIPRTATAFLIGSLAIVGLPPLN
                     GFVSEWLVFRGLLEAGSIPELRAASAVTAGLALTGALALACFTKLHGTVFLGTARDPA
                     VLARPGADAGLLAPQFFLAAVCITIGMLPALVMPAAARAAAVVSGGNWLRDDFGEATV
                     TVTAISLVAVALLVLTATIWVVRRRGSRSSVRVLETWTCGYPRVTSRMQYPASGFAAS
                     LLAAFGPLSGSRIETGAGTFHVRVADPILDRVGRPVWDRVQQTASSLRVLQTGRLRWY
                     LLYLIFSLLALLVYLWAVTR"
     gene            complement(4058..4762)
                     /locus_tag="VGA78_05090"
     CDS             complement(4058..4762)
                     /locus_tag="VGA78_05090"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX9893274.1"
                     /translation="MQLTIRQAASYFGVDEATVRQWIGARGLPVHRLNERQHLNAIEV
                     WEWAVEQGIPVSRTLLDQARRTPERVPPLSQLLETGRIHRDVEGDSKNAVLASLVERL
                     PLPAEVDREHLLAVLESREAMGSTGIGNGIAIPHVRNPILLHVSQPMVALFLLRRPVD
                     FDSIDGQPVHAIFLVISPSVPSHLRILAELGFALRDPALRELLQARAPDDRLMDRIRE
                     LGEATTGQFPARQPPT"
     gene            complement(4863..>6370)
                     /locus_tag="VGA78_05095"
     CDS             complement(4863..>6370)
                     /locus_tag="VGA78_05095"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEX9893275.1"
                     /translation="VQIGGPTGAFVVIVAGIVAQHGLAGLTVATIMAGLILLGLGLAK
                     LGGVIKFIPHPIVTGFTSGIAVIIFSSQIRDLLGLDLVEVPGEFFAKWGAYVSALPTA
                     DWPAMAVGGGTLLLVLLWPRVSHRIPSPFVALVAATVTAALLHLPVETIGARFGDLDF
                     SLPTPSLPSVNEAMLVSLVGPAITIALLGAIESLLSAVVADGMIGGRHRSNMELVAQG
                     VANVVTPIFGGIPATGAIARTATNVKNGGRSPVAGIVHAVTLLAITLFAGAWAARIPL
                     AALAAILVVVAYNMSEWRSFRDEIRTAPRSDSAVMVSTFLLTVVVDLTVALSVGMVLA
                     AFLFMKRMAEVSNVQAISREMLEREEEEEERSEEAVQKWRGLVPRGVEVYDVNGPFFF
                     GAAETFGEYLRQVSGKPKSIVLDLEGVPAMDSTGLRALTILVQQRLKQNIPVFVVGLQ
                     DQPRELILRSPLADLLGRERLDLSAEEAVEMIRNEGLIITSREARIPKLEP"
BASE COUNT         1226 a         2225 c         2134 g          785 t
ORIGIN      
        1 gagcgttgcc gcgtgccgca ccagatcctc cagcagcagc ggccggccct cgatctgggc
       61 cgcggccagg aagaacgtcc cgaacaaggc caggccgatc cccaccgagg agagcaccag
      121 gtatttccac accgcttcca gggaacgccg gtcccggcgg tggaagatca gcggcgccat
      181 cgcgagcgtg gtcgcctcca tgccgatcca gaagagcgcc agatgatggg ccagcgacac
      241 cagcgtggcc gcggccagga accccagcag gcagctgatg aagacccgtc cgccgcgggg
      301 atggtcgagc ctgagaaagg cacccgcgta gatggcgcag gccaggaaga gcaggctcac
      361 cacggtcaat accatcagac ccatggcatc gagctggagc caggatccgg ggacaaccgc
      421 ctcctggttg cgcccgaacc acagcagggc cacgcccgcg gtgtggcctc ccgcgcccag
      481 cagcagcaac gcgcgccgga ccgaggcggt ccggctgagg tacgccacca gggcgaggag
      541 ggccggcaac agcaccagcg ccagcagcgg gatcactcgc gcagctccgt caggcgggcc
      601 gagtcgagcg agtcgaactc gcggttgatg tggaagacca cgatgcccat gatgaacacg
      661 cccacgaaga tgtccagcag caccccggcc tcgaccagaa acggcacccg ctcgacctgg
      721 ctcaggccga acacgtagat cccgttctcg agaatcaggt agcccaccac ctggctcacg
      781 gccttgcgcc gggtggtcag gaccagcagt ccgatgacga cggtggcgag agccaccggc
      841 accagcatct cgctttccac ctcggggagc ggcagccggg ggccgatgct gaaggcgata
      901 gcgagcgcgc cggcccccag cagcatcgag gcggtgaacc cgatcagcgg ctccatctcc
      961 cgccgcaccg cggcctcgcg gatggcgcgc agcaggaacg cgggaaggat gacggccttg
     1021 accaacaggg tccccgcagc gagaccgatc tggtgagccg aaaacccggg atagagcgcc
     1081 agcggcaacc ccgcgaggag gacgccctgc agcgccacgg cccggatcgt cgcgctgagc
     1141 cggctggtgc ccagcgccca gaagttggtc agcaccacca ggagcaacag cagttcgtgg
     1201 accggttgtc ccatgggctc agctcaacag gaggatcaag gcgaaacccg cgagcgcccc
     1261 ggcggcgacc agcagctggg gcacccggtt catgcgcagg cgggccatga ccgactcgac
     1321 cacgccgacc gcgaccgcaa tcagcaccag acccgcgacc agcgtgacca gcgccagcgg
     1381 ctgcggcaga ttcccccgcg gcaccagcac cgccacgatc aggctcccga acagcgccat
     1441 cttgagcgac ccggcgtaga ggatgagggc caggtccggc ccgctgtggt cgaggaccat
     1501 gacctcgtgg atcatggtga gctccaggtg ggtcagcggg tcatcgaccg gcacccggca
     1561 ggtctccgcc agcgtgatga tgaacaggct ggccgcggcc agcaccagcg atggcgccgc
     1621 cgccctccac gccgccgcca gcggctggcc cagcatgccc atcaaccgga gatcgccggt
     1681 cgacagcacc agcacggtga aacagagaaa cagggccggc tccgcgaaac tcgcgatggt
     1741 cacctcgcgg ctggcgccca tcccctcgaa gctcgacccg gtatccaggg cggccagcac
     1801 cagcagaaag cggcccagcc ccaacaggcc ggcgaaggcc accaggtcgc cggggaaggc
     1861 gatcagcgcg ttccggccgt cgagcggcaa cagcccggcg gccaggagcg tggtcgcggc
     1921 gagaaccacc ggcgccagcc ggaagatcag cgtcgtcgtc cggctgtaca ccacgtcctt
     1981 ccgccacagt ttggccaggt cgcgatagag ttgcaggatc ggcgccccgc ggcgtccggt
     2041 gaggcctgac ttgatccggt tggcgatccc gggcagcgcc ggcgccatcc cgatcaccac
     2101 cagcaaggtc agccagggga aggggctcat cgggtgacgg cccagaggta gaccagcaga
     2161 gccagcagcg agaaaatcag gtagagcagg taccaacgga gccggccggt ctgcagcacc
     2221 cgcagggatg aggccgtttg ctgcacccgg tcccacaccg ggcgtcccac ccggtcgagg
     2281 atgggatcgg ccacccggac gtgaaaggtg cccgcaccgg tttcgatccg gctgccggac
     2341 aggggtccga aggcggccag caggctcgcg gcgaaacccg aggcggggta ttgcatccgg
     2401 ctcgtcaccc gggggtaccc gcaggtccag gtctccaaga cacggaccga ggagcgggac
     2461 ccgcgccggc gcaccaccca gatcgtcgcg gtgagtacca gcaaggcgac ggccaccagc
     2521 gagatcgcgg tcaccgttac cgtcgcctcg ccgaagtcgt cgcggagcca attgccaccc
     2581 gataccaccg cggccgcccg cgctgccgcg ggcatcacca gggccggcag cattccgatg
     2641 gtgatgcaga cggcggcgag gaagaactgc ggtgccagca gtccggcgtc ggcgcccggc
     2701 cgcgccagga cggcgggatc gcgcgcggtt ccgaggaaca cggtgccgtg cagcttggtg
     2761 aagcaggcca gcgccagcgc tccggtgaga gccagtccgg cggtcaccgc actggccgcc
     2821 cgcaattccg gtatcgaacc ggcttccagc aagccgcgaa acaccagcca ctcgctcacg
     2881 aaaccgttga gcggtggaag ccccacgatc gccaacgagc cgatgagaaa ggcggtagcc
     2941 gtacggggaa tcgcccgtga caggccgcct aaccggtcga tctccagggt acccgtgact
     3001 cgtcccacca ccccggcacc gagaaataac aggctcttga aaagggcgtg gttgaggctg
     3061 tgcaagagcg cgccggtgaa tcccagcagc gccagcccgg ggtgctggta ggtggccccg
     3121 agcgagccga ggcctatgcc catcaggatg atgccgatgt tctccacgct gtgatacgcc
     3181 agcagccgct tgagatcgtg ctgggccaga gcccagacca cgcccaggac cgccgaggcg
     3241 agacccagga ggagcaccgt ccagccccac cacgccgggg ccggccccaa caacaccaga
     3301 acccgaagca gcccgtaaat gccggccttg agcatcaccc cggagagcaa ggcggagatg
     3361 tgcgacggcg cggccgaatg ggcgcccggc aaccagaagt gcactgggac catgccggct
     3421 ttgatcccga atccgatcaa tgccagcagc aggatgagtg gagtggacgg ggaatcggcg
     3481 gccaacgccg ccaggtccgc gaagctcgat ccggccgcgc cgccggtcca cgccgcgaac
     3541 atcccgaaca gggcgatggt gctggtgtga gtgagcacca ggtagataaa cccggcccgg
     3601 cggacctccg ccttttcgct ttcgaagatc accagcagcc aggccgaaac cgccatcact
     3661 tcccaggcgg tgagaaaggc tatgatggtc cgggcggtca cgaccccgga gagcgccacc
     3721 aggagaatgg ccaacagcag gtgagcgatg ccgactcggc gccggccccg gtcgtgggcg
     3781 aggtagggaa tcccgtagag agcagccgcc gctcccacgc cgaggacgat gagcagaaac
     3841 caggccgaca gcgggtccaa tccgtaccag cccccacccg gccccggtgg agatccgccg
     3901 gcccgcacca gcagcgccgc cgcgggccag atcgcggtga ccgagcccag gacgacgccc
     3961 caccgaaaca cggcatcagc cagccgggcc cggccctgca agaccagggc gccgacaccg
     4021 gcgaccagga tgaccccgag gccggcgccc agcggcgtca tgtgggaggc tggcgggcgg
     4081 gaaactggcc ggtggtcgct tcgcccagct cccggatccg gtccatgagg cggtcatcgg
     4141 gggcgcgagc ctgcagcagc tcccgcagcg ctggatcccg caaggcgaac cccagctccg
     4201 ccagaatccg aagatgggag gggacgctgg gactgatcac caggaagatg gcgtgaaccg
     4261 gctggccatc gatcgaatcg aaatccaccg gacgccgcag caggaacagc gcgaccatcg
     4321 gctggctgac atgcagcaga atcgggttgc gcacatgggg gatcgcgatc ccgttcccga
     4381 tgccggtgga acccatggct tcccgggact cgagtacggc cagcagatgt tcgcgatcca
     4441 cttcggccgg cagcggcagt cgctcgacca ggctcgcgag caccgcgttc ttgctgtcgc
     4501 cctctacgtc gcgatggatc cggccggtct cgagcagctg cgacagcggg ggcacccgct
     4561 ccggagtgcg ccgggcctgg tccagcaggg tccgggaaac cggaataccc tgctcgacgg
     4621 cccactccca tacctcgatg gcgttgaggt gctgtcgctc gttgaggcgg tgaaccggaa
     4681 ggcctcgcgc cccgatccat tgacggaccg tcgcctcatc gactccgaaa tacgaggcgg
     4741 cctgtcgaat ggtcagctgc atctggtcgg tgtgatcact ggcgacgcgg gttgggcgcc
     4801 tcgagcatcg tgtaccaacg ataacgcggt caacccgcgg ctgcacctgg aaagtcctag
     4861 cctcagggct ccagcttggg tatccgggcc tcccggctgg tgatgatcaa tccctcgttg
     4921 cggatcattt cgaccgcctc ctcggccgag aggtccagcc gctcgcggcc cagcaggtcg
     4981 gccaggggag aacggaggat cagctccctg ggctggtcct gcagtcccac cacgaagacc
     5041 gggatattct gcttgagccg ttgctgcacc aggatcgtca aggcccgaag cccggtggag
     5101 tccatcgcgg gcacgccttc caggtccagc acgatcgatt tgggcttgcc cgacacctgg
     5161 cgcaggtatt cgccgaaggt ctccgccgcg ccgaagaaga acggtccgtt gacgtcgtag
     5221 acttcgaccc cacggggcac caggccgcgc cacttctgaa ccgcttcctc ggatcgctct
     5281 tcctcctcct cctcccgttc caacatctcg cgcgagatgg cctgcacgtt gctcacctcg
     5341 gccatccgct tcatgaagag gaaggcggcc agcaccatcc cgaccgaaag ggccaccgtc
     5401 aggtcgacga ccaccgtcag caggaaggtg ctgaccatca ccgcggaatc cgagcgcggg
     5461 gcggtccgga tctcgtcccg gaagctgcgc cactcgctca tgttgtacgc gacgacgacc
     5521 aggatggctg ccagcgcggc cagcggaatc cgcgccgccc aggcaccggc aaacagcgtg
     5581 atcgccagca gcgtcacggc atggacgatc ccggcgaccg ggctccggcc gccgttcttg
     5641 acgttggtcg cggtgcgggc gatcgccccg gtggcgggga tgccgccgaa gatcggcgtc
     5701 accacgttgg ccacgccctg cgccaccagt tccatgttgc tgcggtgccg cccgccgatc
     5761 atgccgtcgg cgaccaccgc cgacaggagc gattcgatcg cgcccaggag cgcgatggtg
     5821 atggcgggcc cgaccagcga caccagcatg gcctcattca ccgacggcag cgacggggtg
     5881 gggagagaga aatcgaggtc gccgaaccgg gcgccgatgg tctccaccgg caggtgcagc
     5941 agcgccgccg tcacggtcgc cgccaccagc gccacaaacg gactggggat ccgatgggag
     6001 actcggggcc agagcagcac cagcagcaga gttccgccgc ccaccgccat ggcgggccaa
     6061 tcggctgtgg gcagcgccga tacataggcg ccccatttgg cgaagaactc gccgggcacc
     6121 tcgaccagat cgagacccag caggtcacgg atctggctgg agaagatgat caccgcgatc
     6181 ccgctggtga atccggtgac gatgggatgg ggaatgaact tgatgacgcc gcccagcttg
     6241 gccaggccca ggcccagaag aatcagcccg gccatgatgg tagcgacggt gagcccggcc
     6301 aggccgtgct gggccacgat tccggccacg atgacgacga acgcgcctgt gggtccaccg
     6361 atctggaccc
//
LOCUS       DASWKS010000172         3470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1183745, whole genome shotgun sequence.
ACCESSION   DASWKS010000172 DASWKS010000000
VERSION     DASWKS010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1183745"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1959
                     /locus_tag="VGA78_05100"
     CDS             <1..1959
                     /locus_tag="VGA78_05100"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF006914.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEX9893276.1"
                     /translation="TETSDEFGTGDVKYHLGAEGMYQTRGGQAVTVTLAHNPSHLEYV
                     APVVVGRTRARQTNRRGQQAVQNPSVAVPIVIHGDAAFAGQGVVAETLNLGALKGYSV
                     GGTIHLITNNQVGFTTDIPDARSTTYASDLAKGFDVPVIHVNADDAEACLDAMRLAMM
                     YRARFHQDALIDLVGYRRHGHNEGDEPAYTQPRMYEAIRNHPTARVRYAELLAGRGTV
                     TAAEAEAQYESVYQHLVAEQQGLKATLAAQREAEPGPRRVVPGPEPSTEVPADTLIAL
                     NDMLLARPEGFTVHPKLGRQLERRRQVMEGDGGLDWAHAEALAFASLLTEAVPVRLTG
                     QDTERGTFSQRHLALHDHATGAKWIPLQHLRGALAPFELHNSPLSELATVGFEYGYSA
                     AAPEALVLWEAQFGDFVNGAQVIVDQFMSAGLSKWGVTARLVLLLPHGYEGQGPEHSS
                     ARIERFLQLAAENNMRLANCTTPAQYFHLLRRQALRARIRPLVVFTPKSLLRHPLASS
                     QLSELAGGRFQKVMDDAWAAERAGDITRLLLCSGKVYYDLLPEAEKMKQGRPAIARLE
                     QLYSFPEQEVRQLLERYPNLREVVWTQEEPRNLGAWDYLDEKLLAILPRNAKLSYAGR
                     PERASPAEGYPVAHTAAQARLVEDALRA"
     gene            2083..2421
                     /locus_tag="VGA78_05105"
     CDS             2083..2421
                     /locus_tag="VGA78_05105"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893277.1"
                     /translation="MPTATDLDLLQGTLDTLVLKALTWGPRHGYAVARWIRQTTRDEL
                     EVEEGALYTALHRMHRRGWLKAEWGLSENNRKAKYYSLTPAGRGELGRSADQWSRYSR
                     AVVRVLEASA"
     gene            2418..>3470
                     /locus_tag="VGA78_05110"
     CDS             2418..>3470
                     /locus_tag="VGA78_05110"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893278.1"
                     /translation="MSWRGFKRLFTLDTGRPDLDAEVDRELEFHFASSVADLMAEGLD
                     ETAARAEAERRFGSATRTRAGLIQIDHHREDRVRRIERLEALLHDLRLALRSLARQPG
                     FVLTVAVTLGLGIGANATMVGLVDRLVFRAPAHVTDADQVVQLSLTQVHPTFGSFTNT
                     GVAWPDYVLAQRTAGFSATAAFYTGRLTLGRGLEAQRVNVTMASAGFFPLLGVRPLIG
                     RFYSEEEDRIGAGTPVAVLGERFWRRQFGADRAVLGSSIRLGSNLFTVIGVAPRGFTG
                     IELNAVDVWIPVGSGAVEMLGPNTDWSTTRNWEWVRVLARFRPGARPEASEAALTTSY
                     RGEIASDPDRNQNSTFN"
BASE COUNT          579 a         1204 c         1153 g          534 t
ORIGIN      
        1 accgagacct ccgacgaatt cgggaccggc gacgtgaagt accacctcgg tgccgagggc
       61 atgtaccaga cccgcggcgg acaggcggtg acggtcaccc tggcgcataa ccccagtcac
      121 ctcgagtatg tggcgccggt cgtggtggga cgaacccggg ctcgtcagac caaccgccgg
      181 ggccagcagg cagtccagaa ccccagcgtg gccgtgccga tcgtgattca cggcgacgcc
      241 gccttcgccg ggcagggggt cgtggccgag accctcaatc tgggggcgct caaggggtac
      301 agcgtcggcg gtaccattca tctcatcacc aacaaccagg ttggtttcac caccgatatc
      361 ccggatgccc ggtccaccac ctatgcctcg gacctggcca agggtttcga cgtgccggtg
      421 attcacgtca atgcggacga cgccgaagcc tgcctcgacg ccatgcggct cgccatgatg
      481 taccgggccc ggttccatca ggacgcgctg atcgacctgg tgggttaccg ccggcacgga
      541 cacaacgagg gagacgaacc ggcctacacc cagcccagga tgtacgaagc gatccgcaac
      601 caccccaccg cacgggtccg ctatgccgag ctgctcgccg gccgcggcac ggtgaccgcc
      661 gccgaggccg aagcgcagta cgagtcggtg taccagcatc tggtggcgga gcaacagggc
      721 ctcaaagcca ctctcgcggc ccagcgcgaa gccgagccgg ggccccgccg ggtggtgccg
      781 ggcccggaac cctcgaccga agtgcccgcg gacactctga tcgcgctcaa cgacatgctg
      841 ctggcccggc ccgaaggctt taccgtgcat cccaagctgg gccggcagct ggaacggcgg
      901 cgccaggtga tggaagggga tggcgggctc gactgggcgc acgccgaggc gctggcgttt
      961 gcctcgctgc tgaccgaggc cgtgccggtc cgactcaccg ggcaggacac cgagcgcggc
     1021 acgttcagcc agcgtcatct ggcgctccat gatcacgcca ccggggccaa gtggattccg
     1081 ctgcagcatc tgcggggcgc cctggcgccc ttcgagctgc acaacagtcc gctgtcggag
     1141 ctcgccaccg ttggattcga gtacggatac agcgcggccg cgccggaagc gctggtgctc
     1201 tgggaagcgc agttcggcga tttcgtgaac ggtgcgcagg tgatcgtgga ccagttcatg
     1261 agcgccggcc tctccaagtg gggcgtgacc gcccggctgg tcctgctgct cccccatggc
     1321 tacgaaggcc agggcccgga gcattccagc gcccggatcg aacgattcct gcagctggcc
     1381 gcggagaaca acatgcgttt ggccaactgc accaccccgg cccagtattt ccatctgctt
     1441 cgccgccagg cgctccgcgc ccggatccgt ccgctggtgg tctttacgcc gaagagtctg
     1501 ctgcggcacc cgctggcgtc ctcccagctt tcggagctgg ccggaggccg ctttcagaaa
     1561 gtgatggatg acgcctgggc cgccgagcgc gcgggggata tcacgcgcct cctgctctgc
     1621 tccggcaagg tctattacga tctgctgccc gaagcggaga agatgaaaca gggccgcccc
     1681 gccattgccc ggctggagca gctgtattcc ttcccggagc aggaggtgcg gcagctgctg
     1741 gagcgctacc ccaacctgcg cgaggtggtc tggacccagg aagaaccgcg caacctgggg
     1801 gcgtgggact acctggacga aaagctactc gcgatcctgc cccgaaacgc caagctctcc
     1861 tacgccggcc ggcccgagcg cgccagcccg gcggaagggt acccggtagc ccataccgcg
     1921 gcccaggccc gtctggtgga agacgccctt cgggcgtagt cgaaggcggt cgaagggggt
     1981 cgaggggtgt ctacctcttc gaccgtcttc gaccatcttc gaccgccttc gactttcttc
     2041 gaccggcgct atagattccc ctcaacgctt caggggacgc cgatgccgac cgccaccgac
     2101 ctggacctgc tccagggcac cctcgatacc ctggtcctca aagccctcac ctggggcccg
     2161 cggcacggct acgcggtcgc ccgctggatt cgacagacca cccgcgatga gctcgaggtc
     2221 gaagaaggcg ccctctacac cgccctgcac cggatgcatc gccgcggctg gctcaaggcg
     2281 gaatggggac tgtcggagaa caaccgcaaa gccaagtact actccctgac ccccgcggga
     2341 cggggcgagc tcggccgaag cgccgatcaa tggagccgct actcccgcgc cgtggtgcgg
     2401 gtgctggagg cgtccgcatg agctggcgcg gcttcaaacg actgttcacc ctcgataccg
     2461 gccgtcccga tctggacgcc gaggtggatc gggaactcga attccatttc gcatccagcg
     2521 tggccgactt gatggccgag ggtctcgatg agacggccgc ccgggccgag gccgaacggc
     2581 gcttcggcag cgcgacccgg acccgggccg gcttgatcca gatcgatcac caccgggagg
     2641 accgggtgag acggatcgag cgactcgagg cgctgctgca cgatctgcga ctggccctcc
     2701 gcagcctggc ccgccagccc ggattcgtgc tcaccgtggc cgtcaccttg ggcctcggga
     2761 tcggcgccaa cgccaccatg gtggggctgg tggaccggtt ggtcttccgc gcgccggccc
     2821 acgtgaccga cgcggaccag gtggtacagc tgagtctgac ccaggtgcac ccgaccttcg
     2881 gctccttcac caacactgga gtggcctggc ccgattacgt cctggcccag cgcaccgcgg
     2941 gattcagcgc caccgcggcc ttctacaccg ggcgactcac gctgggccgg ggcctcgagg
     3001 cccagcgggt caacgtcacc atggcctccg ccggcttttt cccgctgctc ggggtacggc
     3061 ctctgatcgg ccggttctac agcgaggagg aagaccggat cggggccggc accccggtcg
     3121 cggtcctcgg agagcgtttc tggcggcgtc agttcggcgc cgaccgggcc gtcctcggca
     3181 gcagcatccg gctgggaagc aatctgttca ccgtgatcgg cgtggctcct cgcggtttca
     3241 ccggcattga gctgaacgcg gtcgacgtct ggatcccggt gggatcgggc gcggttgaaa
     3301 tgctcgggcc caacacggat tggagcacca ctcgcaattg ggaatgggtg cgggtcctgg
     3361 cgcggttccg acccggagcg cggccggagg cttcggaagc ggcgctcacg acgtcatacc
     3421 ggggagaaat cgcatccgat ccggaccgca accagaactc gaccttcaac
//
LOCUS       DASWKS010000173         3792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1943546, whole genome shotgun sequence.
ACCESSION   DASWKS010000173 DASWKS010000000
VERSION     DASWKS010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1943546"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VGA78_05115"
     CDS             <1..408
                     /locus_tag="VGA78_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HEX9893279.1"
                     /translation="TRLIDMGIEAFNVASAVNLVAAQRLVRRICTDCKAPATYTREEV
                     LSLGTDLENVRFMKGTGCDACGGSGYRGRQGLYEVMALSPELRRMILRGASVEEIRIQ
                     AVREGMLTLRADGVKKVERGITTLEEVVKETAA"
     gene            405..1535
                     /locus_tag="VGA78_05120"
     CDS             405..1535
                     /locus_tag="VGA78_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEX9893280.1"
                     /translation="MTMFNLRSLLEEMIEKSASDLHCTAGERPKLRIDGDIVNASVEE
                     VLAPKDTLSLAYSVLTENQKKRFELEDELDFSFGIQNLARFRGNVFKQRGCVAMVLRM
                     IPFNILTFDDLGLPAVVSQLAEKPRGLILVTGPTGSGKSTTLAAVVDRINKSRKGHII
                     TVEDPIEFIHSHQSCIVNQREVGTDTKSFASALKYALREDPDIILVGEMRDLETIAAA
                     LTIAETGHLVLATLHTNSAAESINRIIDVFPSNQQSQVRAQLAFVLEGVMTQTLLQKA
                     SGRGRVMCAEIMVATPAIRALIRDDKIHQIYSAMQSGKKFGMQTMNDALYQAFVQRLV
                     TRDEALRAASDRNEFLRMIGEKPIEEQAIQQVETRQAAAGRR"
     gene            1595..2800
                     /locus_tag="VGA78_05125"
     CDS             1595..2800
                     /locus_tag="VGA78_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9893281.1"
                     /translation="MPMFEYTAKAAASGQILKGQLDVPSRDDVIAFIRRSRMTPVTVR
                     EAPKALTIPGFGTRIKTRDVVIFTRQFATMINAGLPLVQSLSILAQQTENKALKEVTK
                     SVVYDVEAGNTLADAMRKHPKAFSDLYVNMVAAGEAGGILDTILLRLATFLEKNDALV
                     RKVKGAMVYPGVIMAVAAGAIAVLLIFVIPTFQEMFASVSMELPLPTRIVIGASDLLL
                     AWWWALIGAAVGAAFLTKQYYNTPDGRKRIDQMLLNAPVLGDVLRKSAVSRFTRTLGT
                     LISSGVSILDGLEITAKTAGNRVIHDAVMQSRQSIAGGETIAGPLEQSKVFPPMVISM
                     VAVGEQTGGLDEMLSKIADFYDEEVDVAVSALLSLMEPIMITVLGVIVGGMVVAMYLP
                     IFDMVNAVQ"
     gene            2891..3277
                     /locus_tag="VGA78_05130"
     CDS             2891..3277
                     /locus_tag="VGA78_05130"
                     /inference="COORDINATES: protein motif:HMM:NF040487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-virulence regulator CigR family protein"
                     /protein_id="HEX9893282.1"
                     /translation="MVRVIRIGVVLVGLAGVVGPAAAQGKSRAKDQAVVQTTVSVEVF
                     DRAEVRVIRDYYRESGTRPKPLPPGIAKNLSRGKPLPPGIAKKVLPSDLSRRLTARDG
                     IERVLAGDRVVMVRAGIVIDILAIFD"
     gene            3277..3759
                     /locus_tag="VGA78_05135"
     CDS             3277..3759
                     /locus_tag="VGA78_05135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893283.1"
                     /translation="MMHQKAPRRAWIAVWAGILTLGFLLSDPVVADFRSPIFDPMIQA
                     VLASGRRIPPPNLAHPAWDDLVRCTGIAPVEGKGFESIRWVRIPGPGFRWPGVGPRAL
                     GVWMSYYNMVLIAETRMNDPAVLKHELLHALLQGRAGRGHRHPEFHPSNNCGIYPVRD
                     "
BASE COUNT          693 a         1198 c         1248 g          653 t
ORIGIN      
        1 acccgtctca tcgacatggg catcgaggca ttcaacgtgg ccagcgcggt caacctggtg
       61 gcagcccagc ggttagtgcg gcggatctgc accgactgca aggcccccgc gacctatacc
      121 cgcgaggaag tcctctcgct tggcaccgat cttgagaatg tccggttcat gaagggcacc
      181 ggttgtgatg cgtgtggcgg cagcgggtac cgcggccgcc aggggctgta tgaggtcatg
      241 gcgctctccc ccgagctccg gcgcatgatc ctgcgcgggg cctcggtgga agagatacgg
      301 attcaggctg tgcgcgaagg catgctcacg ctccgggcgg acggcgtcaa gaaggtcgaa
      361 cggggcatca cgaccctgga agaagtggtc aaggagactg ccgcatgacc atgttcaatc
      421 tgcgctcgtt gctcgaggag atgatcgaga agagcgcctc tgacctgcac tgcaccgccg
      481 gcgagcgtcc caagctccgt atcgacgggg acatcgtgaa cgccagtgtg gaagaggtac
      541 tggcgcccaa ggacacgctg tccctggcct attcggtgct caccgagaac cagaagaaac
      601 ggttcgagct ggaagacgag ctcgacttct ccttcggcat ccagaacctg gcccggttcc
      661 gcggcaacgt gttcaagcag cggggctgcg tggccatggt gctccggatg atcccgttca
      721 acatcctcac gttcgacgac ctcgggttgc cggcggtggt ctcgcagctg gccgagaagc
      781 cccgcggcct gatcctggtg accggcccga ccggctcggg caaatccacc acgctggccg
      841 cggtggtcga ccggatcaac aagagccgca agggccatat catcacggtg gaagacccga
      901 tcgagttcat ccattcgcat cagagctgca tcgtcaacca gcgcgaggtg gggaccgaca
      961 ccaagagctt cgcgagcgcc ctcaagtacg ccctgcgcga ggaccccgac atcatcctgg
     1021 tgggcgaaat gcgcgatctg gaaacgatcg ccgccgcgct gaccatcgcg gaaaccggcc
     1081 acctggtgct ggcgaccctg cacaccaact cggccgccga gtcgatcaac cgcatcatcg
     1141 acgtcttccc gtccaaccag cagagccagg tgcgggccca gctggccttc gtgctggagg
     1201 gagtcatgac ccagaccctg ctccagaagg cgtcggggcg gggccgggtg atgtgcgccg
     1261 agatcatggt ggccactccc gcgatccggg ccctgatccg cgacgacaag atccaccaga
     1321 tctacagcgc catgcagtcg ggcaagaagt tcggcatgca gaccatgaat gacgcgctgt
     1381 accaggcctt cgtgcagcgg ctcgtgacca gggacgaggc cctccgggcc gcgtccgacc
     1441 ggaacgagtt tctccgcatg atcggcgaga agccgattga agagcaggcc atccagcagg
     1501 tcgagacccg ccaggccgca gccggccggc gctagaacat ccggtccggg ctcaactccc
     1561 ggtatccagc gttcgaggtt cggaggagca cactatgccg atgtttgagt acaccgccaa
     1621 ggccgccgcc agcggccaga tcttgaaggg gcagctcgac gtccccagcc gggacgacgt
     1681 gatcgcattc atccggcgca gccggatgac gccggtcacg gtgcgggaag cgcccaaagc
     1741 cctgaccatc ccggggttcg ggaccaggat caagacccgc gacgtggtga tcttcacccg
     1801 gcagttcgcc accatgatca atgccggtct gccgctggtc cagtcgctca gcatcctggc
     1861 gcagcagacc gagaacaagg cgctcaagga agtcaccaag agcgtggtgt acgatgtcga
     1921 agccggcaac acgctggcgg acgccatgcg gaagcatccg aaggcgtttt ccgaccttta
     1981 cgtgaatatg gtggcggccg gcgaggcggg cggtattctc gataccattc tgctccgcct
     2041 ggccaccttc ctcgagaaga acgacgcgct ggttcgcaag gtgaagggtg ccatggtgta
     2101 cccgggcgtc atcatggccg tggccgctgg cgccatcgcc gtgctgctga tcttcgtcat
     2161 ccccaccttc caggagatgt tcgcgtcggt cagcatggaa ctgcccttgc ccacccggat
     2221 cgtgatcggt gcctcggatc tgctgctcgc ctggtggtgg gcccttatcg gggcggcggt
     2281 cggcgcggcg ttcctgacca agcagtacta caacaccccc gatggccgga agcggatcga
     2341 ccagatgctg ctcaatgctc cggtgctggg cgatgttctc cggaagtccg cggtgtcccg
     2401 cttcacccgg actctcggta ccctgatcag ctccggcgtc agcatcctgg acgggctgga
     2461 aattacggcc aagaccgccg gcaaccgggt catccacgac gcagtcatgc agtcccgcca
     2521 gtcgatcgcc gggggtgaga ccatcgccgg gccgctggaa cagtccaagg tgttcccccc
     2581 catggtcatc agcatggtgg cggtgggcga gcagaccggc ggtctggacg agatgctgtc
     2641 caagattgcg gacttctacg acgaagaagt ggacgttgcc gtgagcgcgc tgctctccct
     2701 catggagccg atcatgatca ccgtgctcgg tgtcattgtc ggcggcatgg tggtggcaat
     2761 gtatctgccg atcttcgaca tggtgaacgc ggtgcagtaa cggcaggaat cctgcatctg
     2821 tagcatacaa gagcggtgtg acgggcgggc cgccaaggtc cgcccgtccg cctttccaga
     2881 ggaggtcatg atggtcaggg taattcggat cggtgtggtc ctggtcgggt tggctggagt
     2941 ggtggggccg gcggcggctc agggtaagag ccgcgctaag gatcaggcag tggtccagac
     3001 cactgtgtcg gtggaagtgt tcgaccgggc cgaggtccgg gtgatccggg attactaccg
     3061 ggaatccggt actcggccca agccgctccc gcctgggatc gccaagaacc tgagtcgcgg
     3121 caagccgctt cctccgggaa tcgccaagaa agtcctgcct tccgacttgt cccgccgact
     3181 gacggcccgg gacgggatcg agcgggtgct ggccggcgac cgcgtcgtga tggtccgggc
     3241 aggcatcgtt attgacatcc tcgccatctt tgattgatga tgcaccagaa agcgccacgt
     3301 cgagcttgga tcgcggtctg ggcgggaatc ctgactctgg gattcctgct ctctgatccc
     3361 gtcgtggccg atttccggag tccgattttc gatcccatga tccaggccgt cctggcgagc
     3421 ggaaggcgga tccctccccc caatctggcc caccccgcct gggacgacct ggtgcgatgc
     3481 accggaatcg ccccggtgga gggcaagggc ttcgagagca ttcgctgggt caggattccg
     3541 ggaccgggtt tccgctggcc cggcgtcggg cctcgggcac tcggggtctg gatgtcttac
     3601 tacaacatgg tgctcatcgc cgagacccgg atgaacgacc cggcggtgct caagcacgaa
     3661 ctgctgcacg ccctgctcca ggggcgggcc ggccggggcc accgtcaccc ggagttccac
     3721 cccagcaaca actgcgggat ctacccggta agggactgac ggtcgaagag ggtcgaagac
     3781 agtcgaaggg gg
//
LOCUS       DASWKS010000174         8466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1943903, whole genome shotgun sequence.
ACCESSION   DASWKS010000174 DASWKS010000000
VERSION     DASWKS010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8466
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1943903"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..728
                     /locus_tag="VGA78_05140"
     CDS             54..728
                     /locus_tag="VGA78_05140"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893284.1"
                     /translation="MDSPAKPSKTTSAAPAAPSVSREERLTAWLTANARFVAIGAAAV
                     VLVVLVTWFMAASGRRKANFARQALESAWGSADAGNIPQASAELQRVAATYRGTEAAV
                     EATLSLNQTRLIAGQNQLAVDDLRRFLQDRPPARFVASGNMLLGAALENLGKSGEAAE
                     AYMAASAAAEMSHTKAEALLAAGRTYRAAGQNDKAIHAYRTVVDQHKETAAFPIAEVR
                     LGELVK"
     gene            complement(783..2126)
                     /locus_tag="VGA78_05145"
     CDS             complement(783..2126)
                     /locus_tag="VGA78_05145"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEX9893285.1"
                     /translation="MSTPCRGLLTGLLMPIMTACGPAPDLGIRTVELDPPEDTVSAFE
                     PFAVVDPDLPDRIIVGAQYGPGYNRGGLRMWSWSTDDGGRTWRAGRVIPKQFPPAGQA
                     LAADLTMAIGPDGTVYHLSLTSDSAPGGLMTAGAALAVSSDGGRSFSPRTFFGGVDQS
                     SPGVMVFTDKSWMAVDRHEPSPYRGTIYLSWSRNRVSVGPSDTTVSTSPAFAWSSDGG
                     RSISPPIALADSGFGTELAVTPDGVLHAVWTVHDRVILHRSSSDGGRSFGSPHLVAAV
                     ARTGAVVELPRLTAGPGGALLVCWTQGTGEGQETSAIWCATSRDGEDWSVAAAAPVAP
                     AGVPVGYPAVAASSDAFWLLAYAADSSGLSVRLLRSSDGRSFTASRALASRPLPPQGL
                     CTRPGLPCRRSGAGFFPGDYVTLAGSSGRLVAAYGLPRTTLPHATSIVVTVIDVP"
     gene            complement(3358..4671)
                     /locus_tag="VGA78_05150"
     CDS             complement(3358..4671)
                     /locus_tag="VGA78_05150"
                     /inference="COORDINATES: protein motif:HMM:NF025224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893286.1"
                     /translation="MTARLATLAALSALGLAACSTADRVTAPLAGLTFDIQPADVCDG
                     VFVTIPECEALVALYNSTNGDEWTDATNWGADNKPCGWAGVTCQNGDMGPVVVLAFLS
                     GQNMSGTLPPELGNLFAILGISFGHNELTGPIPPELGSLANLRNLDLTLNALTGPIPA
                     TLGNLANLETLELGGNQLTGPIPAWLGNLEHLRILQLWENELTGTIPAALGSLGNLER
                     LELNSNQLTGTIPPELGDLEALQQLQLHNNQLTGSIPPELGSLANLGGLILSFNQLSG
                     TIPAELGNLGSIQLLSAVNNQLTGLVPLPVAALEQTAVCLLNNNEGLFVPDIASYQAV
                     ATNGLICNLPLSSAEDIGDDAVDQIEELVPDPLVSGQANALISKIENAVAKAANGQYQ
                     AAINQMEAFISQLNTMVGDGILMPAEAAPFLVQAQSLIDIWTEAL"
     gene            complement(4947..7229)
                     /locus_tag="VGA78_05155"
     CDS             complement(4947..7229)
                     /locus_tag="VGA78_05155"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX9893287.1"
                     /translation="MPVRALRWDHGGTGHRRAAAAPSGRVGVYRPRRPRASSLYRLLE
                     RHFRELCLVWDERFAPTSGDWRGVIPKVVDQFLACGLLEHGFARIRCDTCAPEYLLAF
                     SCKCRYFCASCHAKRLARWSLWLDETLLAPVPHRQVVLTLPKRLRAYCLYRRALLGDL
                     ARVAARTVTAAVRATTGEADLRVGIVACLQTHGSLANWHPYLHLVVTDGGFRPDGTFV
                     RWPGWPSHDTASLTEAFRRAVLRLLVRRGLFDEDQAQGMLQWPHSGFHVHAGVGVPQD
                     DRACALRLARYCARNPVALERMTDPTIEQVTYRSRQGRGAHRRHRAGGSAGVSRPPGD
                     PHPRARPGDAALLRLVRQPDPGHAAASGWGRGRGAGLDPRPGRLVAPRRRWRATTSWG
                     DGAIVAFVRETAQGRVATGPGGPMTARLATLAALSALGLAACSADRATEPLAGPTFAI
                     DPADVCDGTGVTVPECEALVALYNSTDGDNWSPYNTNWGANNNPCTWVNAICPDNGDI
                     GPVVAILFLGGNNMSGTLPAELGNLFGLTGILFHFNPELTGPIPPELGNLANLQVLHL
                     DGNALTGPIPATLGNLADLRILRLGDNALTGTIPPALGTLANLEQLELQNNALTGVVP
                     LPVAVLGGGLLICDFTGNAGLYMPDIQAYRDADQDGDGSICGLELASAEDIGEDAVDG
                     IEDLIPPLTGGQANALASKIENAEAKAAMGNYQAAINQMEAFIAQLNTMVADGTLTAG
                     EAAPFFEQAQALIDIWTESL"
     gene            7981..>8466
                     /locus_tag="VGA78_05160"
     CDS             7981..>8466
                     /locus_tag="VGA78_05160"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HEX9893288.1"
                     /translation="MVLPPSPSPVNPADLQPVETEALFSAVYQELKRLARHQLRVLGG
                     GATLNTTELVHETFLKLARGQDANWDGRAHFFGAASRAMRQVLVDFARRRGASKRGGS
                     WRSISLNDAQSTLQVELDEILALDTALDQLDTVNKRLRQVVELRFFGGVPEEDIARML
                     GV"
BASE COUNT         1392 a         2694 c         2981 g         1399 t
ORIGIN      
        1 tacgaaggaa ccactgacac atggcgggac gggccggttc gttgaaacag acaatggatt
       61 ctccagccaa gccgagcaag accacatccg ccgcaccagc ggctcccagc gtgagccggg
      121 aggagcggtt gacggcatgg ctgaccgcca acgcgcggtt cgtggccatc ggggcggcgg
      181 cggtggtgct ggtcgtgctg gtcacctggt tcatggcggc gagcggcagg cggaaagcga
      241 atttcgcgcg acaggcgctg gagtcggcct ggggatccgc cgatgccggc aacatccccc
      301 aagcttcagc cgagttgcag cgggtcgccg ccacctaccg cgggaccgag gctgcagtcg
      361 aggcgacact ctcgttgaac cagacccggc tcatcgcggg gcagaaccag ttggcggtcg
      421 acgatctgcg gcgctttctg caggacaggc cgccggcccg ctttgtggcc tcgggcaaca
      481 tgctgcttgg cgccgcgctc gagaacctgg gcaaatccgg tgaggccgcc gaagcgtaca
      541 tggccgcctc ggccgccgcc gaaatgagcc acaccaaggc cgaggcgctg ctggcggccg
      601 gccgcaccta ccgggctgcc ggacagaatg acaaggcgat ccatgcctac cggaccgtgg
      661 tggatcagca caaggaaacc gcggcgtttc cgatcgccga ggtccggctg ggcgagttgg
      721 tcaaatagcc gcgacgtgcc atccgaagtc acgagagggc ccggaacctt gccgggcctt
      781 tttcatggga cgtcgatcac ggtcaccaca atcgaagtgg cgtgggggag ggtagttctg
      841 ggcaagccgt aagcagccac cagtcgcccc gagctgccgg ccagggtgac gtaatctccc
      901 gggaaaaacc cggcgccgga gcggcggcag ggcaacccgg gacgggtgca aaggccctgg
      961 ggcggcaggg gacgggacgc cagagcccgg ctcgcggtga aactgcgccc atccgaggag
     1021 cgcaacaggc ggacgctcag ccccgaactg tccgccgcat aggccagcag ccagaacgca
     1081 tccgacgagg ccgccacggc tgggtacccg accggaacgc cggccggggc caccggcgcc
     1141 gccgctgcca cagaccagtc ctctccatcc cgtgaagtag cgcaccagat cgccgaggtc
     1201 tcctgacctt cgccggttcc ctgggtccag cagaccagga gggcaccgcc gggtccggcc
     1261 gttaggcggg gcagctccac caccgcgccg gtcctggcaa ccgccgcgac caggtggggt
     1321 gagccgaagc tcctgccccc atcgctcgag ctccgatgca ggatcacccg gtcgtggacc
     1381 gtccataccg cgtgcaggac tccgtcaggt gtcactgcca gctcggttcc aaagccggaa
     1441 tcggccagtg cgattggcgg agagatggag cgcccgccgt ctgaggacca ggcaaacgcc
     1501 ggggacgtgg acaccgtggt gtcgctgggc ccaacgctga cacgattgcg ggaccaggac
     1561 aggtagatgg taccgcggta gggactcggc tcgtgtcggt ccaccgccat ccaggacttg
     1621 tcggtgaaga ccatgacacc gggagaggat tggtcgacgc cgccgaaaaa ggtcctgggg
     1681 gagaagctgc gcccgccatc actggacacg gccagggcgg ctccagccgt catcagtccg
     1741 cccggggcgg agtcgctggt caacgagagg tgatacacgg tgccgtccgg cccgatcgcc
     1801 atggtcaggt cggcagccag cgcctgaccg gctggcggaa actgcttagg gatgactcgt
     1861 cccgcccgcc aggtccggcc gccatcatcg gtcgaccagg accacatccg gaggccgcct
     1921 cggttgtagc cggggccgta ctgggccccg acgattatcc ggtccgggag gtcgggatcg
     1981 accacggcaa agggctcgaa ggccgagacg gtgtcctcgg gtgggtccag ctcgaccgtg
     2041 cggatgccca ggtcgggggc ggggccgcac gccgtcatga tcggcatcag caagccggtc
     2101 agcaggccgc gacagggagt cgacaccacg tgatcctgag ctgggaagcc ctgatactag
     2161 cgccaaatcg ggattgttcc ttatgacgta taagatgtat tctgttaagt tggattgttg
     2221 gtaactgtgg gaaacgttgg taagtcgata cccctgctgc ggcttgggcc agttctgaca
     2281 gctctgcgac gtcggcctgt cgtggggaat tgtccgtggg gtttcccggc cggcgtccgt
     2341 caggtcccgg tgattccctg ccacccacct tgccacccgt tcgcggaagt acctcatgta
     2401 ctacgtgagc ttgatgtttt acttgagccc tggccttcag ccaccgccgg tcggcttggc
     2461 cagtcgcctc tgcagcttct caggttcgta gtcgctggtg gacttgtcga ccgcgacatt
     2521 gattgcggcc ggagggctcc ctgggagcgg cggttgcccg ggcccagaca gagtgcgggc
     2581 gcccgggacg tgatccggac ggcgatggca gcgcagcagc gaatcgcacc cggcgattcg
     2641 accatgcctg acctgctgct gcaactgtcg gacgcattgc acatggacgg gcagcatgac
     2701 agcgcgaagg ccgtcggtgc tcgcgtcctg gcgcgcctcg acagagcatc ccgacctacg
     2761 aggtacgcaa ctcccggcgc ctcctgcgac ggatggtcgc ggtcctgggc tattcggacg
     2821 aatgggaccg gctggacacc ctgcatgcgt ggcgggtggc ggccgagcgc gcggtcgagg
     2881 gaccgcgcag tgaggcggtg gccgtcgccc tgaccgattg ggctgaggtt cggcagcggc
     2941 gcggggacct gctcgccgcg gacacattgc tggtcgcgac gctcggcatt catcgtgagc
     3001 ttggcctgca atcgatgccg gccgggcgga cgctcacgat cctggccagg ctctccgtgg
     3061 agcgcgggct gctcccccga gccgattcac tatttcggtc ggcaggcgga cggatggggg
     3121 aagccgacgc cgcattcgct cgcgccctgc gcgggcacga ggaacggttc cctcccgact
     3181 acctgttcac ggcccaggtg cgcctcgact acggccggct cctcgtcggg ctgaagcggg
     3241 gccgggaggc caggtcgatg ctccaagagg ccgtgccggt gctggtccgg cgctggggcg
     3301 agcaggattc ccgggtccgg gaggcccggg actcgccgcc gcgcacggaa ggacccgcta
     3361 gagcgcctcg gtccagatgt cgatcaggga ctgcgcctgg accaggaagg gtgcggcctc
     3421 ggccggcatc aggatgccgt cgcccaccat ggtgttgagc tggctgatga acgcttccat
     3481 ctggttgatg gccgcctggt actggccgtt ggcggccttt gccacggcgt tctcgatctt
     3541 gctgatcagc gcgttcgcct ggcccgaaac gagcgggtcg ggcacgagct cctcaatctg
     3601 gtccaccgcg tcgtcgccga tatcctcggc ggaagacagc ggcaggttgc agatgaggcc
     3661 gttggtggcg accgcttgat agcttgcgat gtcaggaacg aatagccctt cgttgttatt
     3721 caggaggcac acggccgtct gctccagcgc ggccactggc agtggcacca ggccggtaag
     3781 ctgattgttg acggcggaga gcagctggat gctgccgaga tttcccagtt cggcagggat
     3841 ggtgccgctg agctggttga agctcaggat gaggcctccc aggtttgcca ggctgcccag
     3901 ctcaggggga atgctgccgg tcagttgatt gttgtgaagt tgcagttgct gcagcgcttc
     3961 caggtcgccg agctcgggcg gaatcgttcc cgtgagctgg ttgctgttca gctcgagtcg
     4021 ctcgaggttc cccaaagagc ccaacgccgc tggaatcgtt cccgtgagct cattctccca
     4081 gagctgcagg atcctcaggt gttcgaggtt cccgagccac gcggggatcg ggccggtgag
     4141 ctggtttcct ccgagctcca atgtctccag gttggcgagg tttccaagtg tcgcgggaat
     4201 gggcccggtc agcgcattga gcgtcaggtc gaggttcctg aggtttgcga ggctgcccag
     4261 ctcaggcgga atcgggcccg tgagctcatt gtggccgaag ctgatcccaa ggatggcgaa
     4321 gaggttgccc agctccggcg gaagcgtccc gctcatgttc tgcccgctca agaaggccag
     4381 caccacgacc ggccccatgt cgccattctg gcaggtgacc ccggcccagc cgcagggttt
     4441 gttgtcggcg ccccagttgg tggcgtcggt ccactcgtcg ccgttggtgc tgttgtagag
     4501 cgcgaccagg gcctcgcatt cggggatcgt cacgaagacg ccgtcgcaga catcggcggg
     4561 ctggatgtcg aaggtgagac cggccagggg cgcggtgacg cggtcagcgg tggaacaggc
     4621 ggcgagcccc agggcgctca gggcggcgag ggtggcaagt cgggcagtca tggatcctcc
     4681 gaggtacagt ggctatccgt acctgcgcct gcttccgggg aagtgcgaca tggggcgtag
     4741 ggcgcagggg accggcttga tcgagctgca gcggttgggg tacacgagag cggcgaaaag
     4801 gacgaaagcg cgaaaaggtt gaggtcgttg cccctccggc gtactccagt cccagctccc
     4861 gcgctgctgg atgccgaaaa gcggcgggat gcgatacgga cactgcagtt ggccatcgcg
     4921 gcgctcgggc gagcaggcag cactcgctag agcgactcgg tccagatgtc gatcagcgcc
     4981 tgcgcctgct cgaagaatgg cgcagcctct ccggcagtca gagttccatc cgcgaccatg
     5041 gtgttcagct gcgcgatgaa ggcctccatc tggttgatgg ccgcctggta gttgcccatc
     5101 gccgccttag cctcggcgtt ctcgatcttg ctggcaagtg cattcgcctg gcccccggtc
     5161 agcggtggaa tgagatcttc gatcccatcc acagcgtcct cgccgatgtc ctcggcactc
     5221 gccagttcca gcccgcaaat gctgccgtcg ccgtcctggt cagcgtcgcg gtaggcctgg
     5281 atgtcgggca tgtacaggcc ggcattgccg gtgaagtcgc agatcaagag cccgcctccc
     5341 aacaccgcca ctggcagcgg cactacgcct gtgagggcat tgttttggag ctcgagttgc
     5401 tcgaggttcg ccaatgtgcc caacgccggt ggaatcgttc ccgtgagcgc attatctccg
     5461 aggcgcaata tcctcaggtc ggcgaggttg ccaagggtcg cgggaatggg cccggtcagc
     5521 gcatttccgt ccaggtggag gacctgaagg tttgcaaggt tgcccagctc gggcgggatc
     5581 gggcccgtga gctccggatt gaaatggaag aggatccccg tgaggccgaa gaggttgccc
     5641 agctccgccg ggagcgtccc gctcatgttg ttcccgccga ggaagagaat cgccacgacc
     5701 ggcccgatgt cgccattatc cgggcagatg gcgtttaccc aggtgcaggg gttgttgttg
     5761 gcgccccagt tggtgttgta agggctccag ttgtctccgt cggtgctgtt gtagagggcc
     5821 accagggcct cgcactccgg caccgtaact ccggtgccgt cgcagacgtc ggcgggatcg
     5881 atggcgaagg tgggaccggc caggggctcg gtggcgcggt cagcggaaca ggcggcgagc
     5941 cccagggcgc tcagggccgc gagggtggca agtcgggcag tcatgggtcc tccagggcca
     6001 gtggctaccc gtccctgcgc cgtctccctg acgaatgcga caatggcacc gtcgccccac
     6061 gacgtggtcg ctcgccagcg ccgccgcgga gcgaccagtc ggccgggtcg aggatcgaga
     6121 ccggcgcctc ggccccgtcc ccaccctgac gccgccgcat gccccgggtc cggctggcgt
     6181 accagccgta gtagcgctgc atcacctggc cgggctcggg gatgtgggtc accaggcggg
     6241 cgagaaactc cagcggatcc acccgctcgg tgccggcggt gggcccctcg gccttgtcga
     6301 gagcggtagg tcacctgctc gatcgtggga tcggtcatgc gctccagcgc gacggggttc
     6361 cgggcgcaat agcgggcgag ccggagggca caggcgcgat cgtcctgggg caccccgacg
     6421 ccggcatgga cgtgaaaccc cgagtgcggc cactggagca tcccctgggc ctggtcctca
     6481 tcgaagaggc cgcggcgcac gaggagccgg agcaccgcgc gacggaacgc ctcggtcagg
     6541 gaggcggtgt cgtggctcgg ccaccccggc cagcgcacga aggtcccgtc gggccggaag
     6601 ccgccgtcgg tgacgaccag gtggagatag gggtgccagt tggccaggga gccgtgggtc
     6661 tgcaggcagg cgacgatgcc gacccggagg tccgcctccc cggtggtggc gcggacggcg
     6721 gcggtcacgg tgcgggcggc cacgcgggcc aagtcgccga gcagggcgcg ccggtacagg
     6781 cagtaggccc ggagccgttt cggcagggtg aggaccactt gccggtgcgg caccggcgcg
     6841 agcagcgtct cgtcgagcca gaggctccac cgggcgaggc gcttggcgtg acaactggcg
     6901 cagaagtacc ggcacttaca ggagaacgcg aggagatact cgggggcgca ggtgtcgcag
     6961 cgaatccggg cgaagccgtg ctcgaggagg ccgcaggcga ggaactggtc gacgaccttg
     7021 gggatcaccc cgcgccagtc gcccgaggtc ggcgcaaagc gctcgtccca caccaggcag
     7081 agctcccgga agtggcgttc gaggagccgg tacagcgaag aggcccgggg ccggcggggg
     7141 cggtagaccc ccacccgtcc gctgggggct gccgcggctc ggcggtggcc ggtgccgcca
     7201 tggtcccacc taagtgcgcg gacaggcatc atgatgggga accccggcac ggtgcggatc
     7261 agatgaacgg acggagcatg atttttccgc gagcacggcc cgcgagcccg tggcgagatg
     7321 aacccagcgg cacgcggaaa cgaaccgggg gcaggagatc gctcctctgc ccccggctcc
     7381 ctagctccct agctccctac ttaatacatc ccacccatgc caccgccagg aggaccggac
     7441 ggcgccgact tctcttcgtt cttcacgacc accacgcact cggtggtgag caggagcccc
     7501 tgcgatcgac gcggcgttct gcagcgccgt gcgggtgacc ttcgtcgggt cgatgacgcc
     7561 ggccttgacc agatcctcgt actcgtccgc ggcggcgttg tagccaaggt tgcgctcagg
     7621 cctgccgttc gcaggtccca cctccggttc acgtcgccta tttacgccgt acggtgatct
     7681 taagcggcat gtcgtacgcg cccagctggc tccccggatt gtagaaatcg ccgcccgtaa
     7741 ctcgttgaag cagacgatgt ctgccctccg gagcgagctg ggtgacgacc tgttcatcgg
     7801 cacggcggaa ctacagctca atcaggttga agtcagctgc gacgtctggg aattcgaccg
     7861 cgcgagctgc gggcttgata agccattagc ttgcagtgag ttatccctgt gtggaatcac
     7921 gctgacagcc gaggtcgggt tattttggca gcaccaatta cggcctcaga gaccgcgcct
     7981 gtggttcttc ccccatcgcc ttccccggta aaccccgctg atcttcagcc ggtcgagact
     8041 gaggcgcttt tctcagcggt ctaccaggag ctgaagcggc tggcgcgtca ccagctccgg
     8101 gttctgggcg gtggtgcgac tctgaacacc accgagctgg tccacgagac ttttctcaag
     8161 ctggcgcgag gccaggacgc caactgggat ggccgggctc atttcttcgg cgcggcctca
     8221 cgggcgatgc gtcaggtgct ggtggacttt gcccgccggc ggggagcgtc gaaacgaggg
     8281 ggctcgtggc ggtcgatctc gctgaacgac gcccagagta ctctccaagt ggagctggac
     8341 gagatcctgg cgctcgatac ggccctcgac cagctcgata ccgtcaacaa gcgcctccgg
     8401 caggtcgtgg agcttcgttt cttcggcggt gtgccggaag aggatatcgc acgcatgctc
     8461 ggcgtg
//
LOCUS       DASWKS010000175         2022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_818758, whole genome shotgun sequence.
ACCESSION   DASWKS010000175 DASWKS010000000
VERSION     DASWKS010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818758"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..1260)
                     /locus_tag="VGA78_05165"
     CDS             complement(229..1260)
                     /locus_tag="VGA78_05165"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX9893289.1"
                     /translation="MSAIKRLALRFLTNPVVLRGVEHTTRGAAAILTLHRFTAFGRSG
                     HDPGALARNLEWLRRRRYRLVPLMALIDQVRYRLPASPRTVAFTVDDGYADFAEVAAP
                     IFARYDCPVTVFLITGFLDGGLWLWWDRIRWAMEQTSHSRLDFSFPTREMHYSWEDPL
                     GRIRASRDLIRRFKDLPNADREAAHLELERRLDVTLPAAPPTEFGPMTWDQVRTLGRG
                     GVRFGPHTVTHPILARTSDEHSRREIRDSWARLSEQTDRTIPVFCWPNGDLTSFGSRE
                     AAYAAEAGMVAGLSTVQASFTRRCWTNDGRRYALPRYAYPQDPSDFAQVVSGLERLKE
                     IARLDLTAR"
     gene            1285..>2022
                     /locus_tag="VGA78_05170"
     CDS             1285..>2022
                     /locus_tag="VGA78_05170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893290.1"
                     /translation="MPSHLSEAAAHRSPVLVLGGGITGLGVLRILARNRIPRWLVATA
                     ADLAFASRHARPAPRPVGAGPAVESDLAGYLMSLPVDSAVLIPCSDAVLLQIALLSPE
                     VRRRFRAAVAPPEVLHRALDKSRFAELLGSIGVSHPRSWTVAGAADLASVPQNVYQRA
                     FLKPRDSQAFFARYGVKGFWVKSREAALLRLEELAPTGLGVQLQEYVPGPPTAHVFVD
                     GYAAAGGDIRALLVRRRLRMYPTDFGNS"
BASE COUNT          307 a          690 c          692 g          333 t
ORIGIN      
        1 gagtagctca atgtccccgg acgcgacacc ccatccgacc aggttggtgc tgcgctaacc
       61 tggtgtgtgt cacaagttgt cagtgtggtg gtgtccggat tcaggtcaag ctgatgactc
      121 ggaggaccca aaccatcacc aaggcggtgc ctaaacccgc ggccgacgcc gccccctgga
      181 aggcgccgct ggtggaaccc gccaggtcga gtgatcagct agaggaactc agcgtgcggt
      241 aaggtcgagg cgggcgattt ccttcaatcg ctccagcccg ctgaccacct gggcgaagtc
      301 ggaggggtcc tgcgggtagg cgtagcgggg cagcgcgtag cgacggccat cgttggtcca
      361 gcagcgccgg gtgaatgacg cctgaaccgt gctcagcccc gccaccatcc ccgcctccgc
      421 ggcataggcc gcctcccggc tcccgaacga ggtgaggtcg ccattgggcc agcagaagac
      481 cgggatggtc cggtcggtct gctcggacag tctggcccag ctgtccctga tctcgcggcg
      541 actgtgctcg tcgctggtcc gggccagaat cggatgggtg acggtgtggg ggccgaacct
      601 gacaccccct cgccccaggg tccggacctg atcccaggtc atgggcccga actcggtggg
      661 aggcgcggcc ggcagggtca cgtcgagccg ccgctccagc tccagatggg ccgcttcgcg
      721 atcggcgtta ggcaggtcct tgaaccgtcg aatcaggtcc cggctggccc ggatgcggcc
      781 cagagggtcc tcccagctgt agtgcatctc ccgcgtggga aaggaaaagt ccagccggct
      841 gtggctggtc tgctccatcg cccagcggat ccggtcccac cagagccaca ggcccccgtc
      901 caggaatccg gtgatgagaa agaccgtgac cgggcagtcg taacgggcga agatcggggc
      961 cgccacctcc gcgaaatcgg cgtagccgtc atcgaccgtg aaggcgacgg tgcgaggtga
     1021 ggcggggagg cggtagcgga cctggtcgat caacgccatc agggggacca gccggtagcg
     1081 ccgccggcgc aaccactcga ggttccgggc cagcgcgccc gggtcgtggc ccgaccggcc
     1141 aaaggcggta aaccggtgca gagtcaggat agcggcggcg ccgcgggttg tgtgttcaac
     1201 cccccgaagc acgaccggat tggtcaggaa tcgaagcgcc agccgcttga tggcggacac
     1261 ccggactatg ataatctggt caccgtgccg agccacctct ccgaagccgc cgcccatcgg
     1321 tcgccggtcc tggtcctggg tggtgggatt accgggctcg gtgtcctccg catcctggcc
     1381 cggaaccgga ttcctcgctg gctggtggcg actgcggccg acctggcctt cgcttcccgc
     1441 cacgcgcggc cggctccccg gccggtcgga gccgggcccg ctgtggaatc cgacctggcc
     1501 ggctacctga tgtcgctgcc ggtcgactcc gcggtgctga tcccctgttc cgatgccgta
     1561 ctgctccaga tcgcgttgct gagccccgaa gtgcgccgcc ggttccgggc ggcggtcgcc
     1621 cctcccgagg tcctccaccg cgcgctcgac aagagccgtt tcgccgagct gctcggctcc
     1681 atcggcgtct cccatcccag gtcgtggacc gtcgcggggg ctgccgatct cgcttcggtg
     1741 ccccagaacg tctaccaacg ggccttcctc aagcctcggg attcccaggc cttcttcgcc
     1801 cgctatggcg tcaagggatt ctgggtaaag tcccgcgagg ccgcgttgct gcggctggag
     1861 gagctcgcgc cgaccggtct cggggtccag ctccaggaat acgtcccggg tccgccgacg
     1921 gcgcacgtct ttgtcgatgg ctatgccgct gccggaggcg acatccgggc gctgctggtc
     1981 cggcgccggc tgcggatgta tcccaccgat tttggaaaca gc
//
LOCUS       DASWKS010000176         6063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3396915, whole genome shotgun sequence.
ACCESSION   DASWKS010000176 DASWKS010000000
VERSION     DASWKS010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3396915"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(344..2974)
                     /locus_tag="VGA78_05175"
     CDS             complement(344..2974)
                     /locus_tag="VGA78_05175"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893291.1"
                     /translation="MRWLSNVWFRLRALFRPGAMERELADEVTFHLAMEADKLVKQGM
                     DPVEAAWEARRRFGGVAYQQERARDAWGIKMMRDFLSDVRHALRQFLRRPGFTVLAIV
                     TLALGLGATVALFSVVRGLLLRPLPVTDQDQLQVFWSDWDWRGIELDFVRERMRAFSG
                     LAGFSAEGQTYRTDGGGSSVLTAGVTSADLFDVIGARPLLGRTFAPGEDRPGAEPVVV
                     VSWGLWQQELGGDPNVLGRRIILAGLPTTVIGVMPRGFYFPTPEYRVWRPLLLDPASP
                     VYRGRGWLVLLGRLKPGTTLAQGNADVGSFAPALKQRFNYPDQWDKSRNPHVTPIRQY
                     LLGDVKPALLLLLGAVGLLLLMACANAAALVLARTTDRSNEIALRTALGAGRGRLARQ
                     IVTESLTLSFMAGAVGAGLAFVLFDLLVASLPLQSGFGDTVHMDWSTFAVGFGLALLV
                     GLVVSAIPVRHLLLGRLEGVSGERGGSSLRRGPGRAHAALVAAEVTLAVLLVTGATLL
                     IRSVGKLYAVDPGFESRGVVVMDLMASVEEMDRSVRWQFFRDIQQRVAALPGVQSMGL
                     TNRLPVRDNGWQGPIEVESRPDLTGTSRPNSLWRSVTPDYHRTLGMDLKVGRGIESSD
                     REGGLPVVLVSESFARKMWNGEDPLGRRIRTAFMGDTSWLTVAGVVEETRMFTMTGEN
                     PMTMYLPYEQSGFPGEGQVLVIRTDAAPATIIPAVRQIVRELDSRVAIARPGSMDDVV
                     RTALAEPLRLRFFLMLFGGLALVLGTVGVYGVVSYSVTRRRGEFGIRMALGAAPGRVL
                     REVVRRGMVPVMGGVVAGLAAALALSRLLGRFLYQIAPTDPVSLALAAVALLGAGILA
                     ALLPGWRAGQVSPVEALRAE"
     gene            complement(2985..3323)
                     /locus_tag="VGA78_05180"
     CDS             complement(2985..3323)
                     /locus_tag="VGA78_05180"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893292.1"
                     /translation="MGTENSEVLRGTLDMLILKTLSLAPLHGWGICERIQQVSGDALR
                     VQQGSLYASLHRLTREGWIQSYWADTENGRRARYYQLTRAGIRQLKVEANHWERLSLG
                     VTRVMAATSV"
     gene            3576..5615
                     /locus_tag="VGA78_05185"
     CDS             3576..5615
                     /locus_tag="VGA78_05185"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9893293.1"
                     /translation="MSVSRLCGLLFALLAGVPALLAQDRTRIGLADFLEYEQVRDFFR
                     GGGPQISPDGRQIVYTRWWVDKMNDRWKASLWLMNADGSRNRWLLDAVTARWSPDGSR
                     IAWVASGEPSGAQIFVRYMDAEGAVTQVTRLDQGPGALAWSPDGRWIAFTMLVPEAGT
                     LSAAVPGRPAGATWSPEPKIVERLDYRRDYSGYSDAGHGQIFVVPAGGGTPRQLTSGP
                     WDHNAPAWTSDGKQLLFSSLRVQEAEYEWRESEIYAVDVASGDIRQLTHRKGPDAGPV
                     ASPDGKLVAYTGYDWTDDTYIASRLYLMNADGSNPRDISGGLDRSPENLLWAPDGGGV
                     YFSAQSEGRSDFYFAPLTGKPRKLTSGADYLTVMSLSNTGLAAGTRTTATDPGNIVTL
                     DLKNPVPQQVTDINGDLLAGKGLARTEEIWYTTADGFRIQGWIMRPPGFDPGRKYPLM
                     LAIHGGPHGMYALATPYMWFEWQYYAAQGYVVLWTNPRGSSGYGSAFGNAIKNAYPGK
                     DYDDLMAGVDTVLSRGYVDRDNMFVYGCSGGGVLTAWVVGHTDRFAAASSECPVINWL
                     SFVGTTDGPGWYRNFAKLPWEDPSEHLRRSPLMYVGNVKTPTLLITGENDLRTPISQT
                     EEYYEALKLLKVPTAMVRLQDQWHAYFYRPSNTMRTLAVRQQWFDRYRKQPPPVP"
BASE COUNT         1078 a         2080 c         1926 g          979 t
ORIGIN      
        1 cgcgacccgt cgaagccgat cccgccgacg cggaaggcac ttcgggtgtt ggagtttgac
       61 gcgcacggtt tggtacgtcg gattattgac tacccgtggt gaggagtgcg tggcgatcct
      121 cgtgctggtg ctggttgttc ccaccacatg tcccattgat ccgagtcgca tttgtgttgt
      181 agtcccggat atggccttca agggtaggag gctttcaggc ggtatggtaa ggggctcttg
      241 ggagtcggcg aagaggccat gactgccagt acgccggact acagcttgga ccttcacgcc
      301 gtcgactccg caggtagctc ccttatggcc tcagcactgg gcgttattca gctctgagcg
      361 cctccaccgg actcacctgc cctgcccgcc agcccggcaa caatgcggcc aggattccag
      421 cccccaacag cgctaccgcc gccagggcca gactcaccgg atcggtcggc gcgatctggt
      481 agaggaaccg ccccagcagg cgcgacagcg ccaatgcagc cgcgagaccg gccacgacgc
      541 cgcccatgac cggaaccatt ccgcgtcgaa ccacctcacg caacacccga ccgggtgcgg
      601 cacccagcgc catccggatt ccgaattccc cccgccgccg ggtgaccgag taggagacca
      661 ccccgtagac gccgacggtg cctaacacca gcgccaatcc cccgaacagc atcaggaaga
      721 accggagccg gagcggctcg gccagcgcgg tacggaccac gtcgtccatg ctgccgggac
      781 gggcgatggc gacccgggaa tccagctctc gcacgatctg ccgcaccgcc gggatgatcg
      841 tggccggggc cgcgtcggtc cggatgacca ggacctgccc ttctcccggg aatcccgact
      901 gctcataggg caagtacatg gtcatggggt tctcgccggt catcgtgaac atccgggtct
      961 cctccaccac gccggccacg gtcagccagc tggtatcccc catgaaggcg gtgcggatcc
     1021 ggcggccgag ggggtcttcc ccgttccaca tcttgcgggc gaacgattcg ctcaccagga
     1081 caacggggag tccaccctcc cgatccgagg actcgatccc acggccgacc ttgaggtcca
     1141 ttcccagagt ccggtgataa tcgggtgtca ccgatcgcca caggctgttg ggccggctgg
     1201 ttccggtcag gtcgggccgg ctctcgacct cgatgggacc ctgccagccg ttgtcgcgga
     1261 ccggcaggcg attggtgagc cccatactct gcactcccgg cagggcagcc actcgctgct
     1321 ggatgtcgcg gaagaactgc catcgcacac tccggtccat ttcttccacg ctggccatca
     1381 ggtccatcac cacgacgccc cggctctcga agccggggtc gaccgcgtag agcttcccca
     1441 ccgaccggat caggagtgtc gccccggtca ccagcagcac ggcgagggtc acctccgcgg
     1501 cgaccaatgc ggcgtgggcc cggcccggac cgcgacgcag actgctccca ccccgctcac
     1561 cgctcacccc ctccagccgg cccagcagca ggtgccgcac cggaatggcc gacaccacca
     1621 gacccaccag cagcgccagc ccgaacccga ccgcgaaggt ggaccagtcc atgtggaccg
     1681 tgtccccgaa gccgctctgg agcggcaggc tcgccaccag cagatcgaac agcacgaagg
     1741 ccagcccggc ccccaccgcc ccggccatga acgagagggt cagcgattcg gtgacgatct
     1801 ggcgggccag tcgtccccgg ccggcgccca gcgcggtgcg gagcgcgatt tcgttgctgc
     1861 ggtcggtggt gcgggccagc actagggcgg ccgcgttggc gcacgccatc agcagcagca
     1921 gccccaccgc gcccaggagc agcagcaggg cgggcttcac gtctcccagc aggtactgcc
     1981 ggatgggggt gacgtggggg ttccggctct tgtcccactg atcgggatag ttgaagcgtt
     2041 gcttgagggc gggggcaaac gacccgacgt cggcgttgcc ctgggccagc gtggtcccgg
     2101 gcttgagcct gcctaacaac accagccagc ctcgcccccg atataccgga gacgcggggt
     2161 ccagcaacag cggccgccag acccggtact ccggcgtggg gaagtagaac ccacgcggca
     2221 tgaccccgat gacggtggtg ggaagaccgg ccagaatgat gcgacggccc agcacgttgg
     2281 ggtccccccc cagctcctgc tgccacaagc cccagctcac caccaccacc ggttcggcac
     2341 cgggccgatc ctcgcccgga gcgaaggtcc ggcccagcag ggggcgggcc ccgatcacgt
     2401 cgaacaggtc ggccgaagtc acaccggccg tcagcacgct gctgcctccg ccatcggtcc
     2461 gataggtctg gccttccgcg ctgaacccgg ccagcccgga aaaggcccgc atccgctccc
     2521 gcacgaaatc cagctcgatc ccgcgccagt cccagtccga ccagaacacc tggagctggt
     2581 cctggtcggt gacgggaagg ggccgaagca gcaacccacg caccacgctg aacagcgcca
     2641 cggtcgcacc caggcccagc gccagggtca cgatggccag cacggtgaag ccgggccgcc
     2701 gcagaaactg gcggagagcg tgtcggacat cgctcagaaa gtcacgcatc atcttgatcc
     2761 cccaagcgtc tcgggctcgt tcctgttgat aggcaactcc accaaagcgg cgcctggcct
     2821 cccacgccgc ttcgacgggg tccatcccct gcttcaccag cttgtcggct tccatcgcga
     2881 ggtggaacgt cacctcgtcg gccagctccc gctccatcgc cccgggccgg aagagggccc
     2941 gcagtcggaa ccagacattg ctcagccagc gcatggtgag accgtcagac tgacgtggcg
     3001 gccatcaccc gcgtcacccc cagcgagagc cgctcccagt gattggcctc gaccttgagc
     3061 tgccggatcc cggcacgagt caattggtag tagcgagccc gacgtccgtt ttcggtgtcg
     3121 gcccaatagg actggatcca accctcccgg gtgagccggt gaagcgaggc gtagagggat
     3181 ccctgctgca cccgaagggc gtcgcccgac acttgctgga tccgctcgca gatcccccag
     3241 ccgtggagtg gggccaggga caacgtcttg aggatcaaca tgtcgagcgt gccgcgcaga
     3301 acctcggaat tctcggtgcc cataccagcc cttggcgaga gtaaccggac ctctcggaaa
     3361 acgagagtaa aggattagac gagccgatag cgtgattcgt tgcaagttcc caagcctccg
     3421 agcccgcctc caccggccga ggacccaagc tggtccggcc cgcttgtcca aatgcaattc
     3481 acacagagag ttagggctcc gccttccgcc ttccgcccac cccccgcaga ttgggagttc
     3541 acccagatgc ctcggtcgct tcccggagct cacccatgag tgtgtcgcgc ctgtgcgggt
     3601 tgcttttcgc gttgctggca ggggttccgg cgctgttggc gcaggatcgc acccgcatcg
     3661 ggctggcgga ctttctcgaa tacgagcagg tccgcgattt ctttcggggt ggtgggcccc
     3721 agatatctcc cgacggccgt cagatcgtgt acacccgctg gtgggtggac aagatgaacg
     3781 accggtggaa ggcgtcgctc tggctgatga acgccgacgg gagccgcaac cgctggctgc
     3841 ttgacgcggt gacggcccgc tggtctcctg acggcagccg cattgcctgg gtggcgtcgg
     3901 gagaaccctc cggcgcgcaa atatttgtgc gctacatgga cgcggaaggg gcagtcacac
     3961 aggtgacacg gctggaccag ggtccggggg cgctcgcctg gtcacccgat ggacggtgga
     4021 ttgccttcac catgttggta cccgaagcgg ggacgctcag cgccgcggtg ccgggtcgcc
     4081 ccgcgggtgc tacctggtcg cctgagccca agatcgtcga acggctcgat tatcgtcgcg
     4141 actactcggg gtacagtgac gcgggccatg ggcagatctt tgtcgttccc gccggtggcg
     4201 gcacccctcg ccagctgacc tcgggtccgt gggatcacaa cgcgcctgcc tggacctcgg
     4261 acggaaagca gttgctgttc agcagtctga gggtccagga ggcggagtac gagtggcgcg
     4321 agtcggagat ctacgcggtc gacgtggcca gcggcgacat ccggcagctt acccaccgga
     4381 aggggccgga tgccggcccg gtagcgagcc cggatggcaa gctggtggcc tacaccggct
     4441 acgactggac cgacgacacc tatatcgcca gccggctgta cctcatgaac gccgacggct
     4501 ccaacccgcg tgacatttcc ggcggcttgg accggagccc ggagaacctg ctctgggctc
     4561 cggatggagg tggcgtctac ttcagcgccc agagcgaggg ccggagcgac ttctacttcg
     4621 cccccctgac cggcaaaccc cggaagctca cttccggcgc cgactatctc acggtcatga
     4681 gcctgagtaa taccgggctc gcggcgggta cccgcaccac cgccacggat cccggcaaca
     4741 tcgtcactct cgacctcaag aacccggttc ctcagcaagt aaccgacatc aacggggacc
     4801 ttctggccgg taaggggctc gcccgtacgg aggagatctg gtacaccacg gctgacggct
     4861 tccggatcca gggctggatc atgaggcctc ccggtttcga tccggggcgg aagtatccgt
     4921 tgatgctcgc gattcatggc gggccccatg ggatgtatgc cctggccact ccgtatatgt
     4981 ggttcgagtg gcagtactac gccgcccagg ggtatgtggt gttatggacc aacccgcggg
     5041 gcagctcggg gtacgggagc gcgttcggca acgccatcaa gaacgcttat ccggggaagg
     5101 actacgacga tctgatggcg ggcgtggaca cggtgctgag ccgaggttat gtggaccgcg
     5161 acaacatgtt cgtttacggc tgcagcggcg gtggggtgct caccgcatgg gtggtgggcc
     5221 ataccgaccg gtttgcggcc gcgtcctcgg aatgcccggt gatcaactgg ctatcatttg
     5281 tcggtaccac cgacgggccc ggctggtatc gcaactttgc caagctgccg tgggaagatc
     5341 cctccgagca tctccgtcgg tcgccgctca tgtacgtcgg caacgtgaag acccccacgc
     5401 ttctgatcac gggggagaac gacctccgca cgcccatctc gcaaaccgag gagtactacg
     5461 aggcgctcaa gctgctgaaa gtgcccacgg ccatggtccg gctccaggat caatggcacg
     5521 cctacttcta ccggccgtcc aacacgatgc gcaccctggc ggtccggcag caatggttcg
     5581 accggtaccg caagcaaccg cccccggtgc cgtgaccaga gcgggggtgt gacggacgtc
     5641 acaaccgtga aacgctcttg ctcttggctt catcgtttcc tatgttgagc ggacgtggag
     5701 gtcccatggt cgggggcctc cggattacaa aacgcgccta gcgaccggcg agaaaccgct
     5761 caggactctg atgcgaaacc acctcttcct cacctccgcc aatcggcgtg ttaccgcgcc
     5821 cggggccttc gtgcgcccgg attcgggccg caccggtccg cgttggatgg atctgcgtgg
     5881 cgcttcgcag cagagacgac gagcacctta gaagtccagg ataccatcgt gtgatccgcg
     5941 gccttccggg tgctccaaga aacccggaag gccgttcgtt ttgagctctg gaccaggatc
     6001 acgacgatga ccagtcagcc caccctcgat caggcgatca tcacccgcta cgcgggtcag
     6061 ccg
//
LOCUS       DASWKS010000177         4750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3049816, whole genome shotgun sequence.
ACCESSION   DASWKS010000177 DASWKS010000000
VERSION     DASWKS010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3049816"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..2801)
                     /locus_tag="VGA78_05190"
     CDS             complement(177..2801)
                     /locus_tag="VGA78_05190"
                     /inference="COORDINATES: protein motif:HMM:NF038032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HEX9893294.1"
                     /translation="MTYRLTALGCGLTLSAISGPLASQTPVREFVLKQVSVPHPYYWR
                     EMYLPQVTSGPSAAAWSPDGTELIYSMQGSLWRQRVGSDSTRQLTDSPGYDYQPDWSP
                     DGRWVVFSRYHDDQLELRALDLERGQESSLLRDGGVHLDARFSPDGTRLAFVSTAYQG
                     RWHVFVAPWENGRVGMPVRITQDRQSGLPRYYYSSWDHYLSPTWSPDSRELILVSNRG
                     RIWGTGGFWRMEARADAEMRELWYEETTWKARPDWARDGRRVVYSGYHGRQWNQLWLM
                     TGEGGDPFQLTYGEFDATNPRWSPDSRRILYTANAACRVQDADCRGVAAGTVLRVVEV
                     PGGRHTTIQPINRIRLKAYGILALTITDSAGTVIPARVSVFDSTERSWAPDDAWRHAD
                     EAFVRGERLFEYGYFHSPGRSSLSLPPGRYTVEVWKGPEYRVGRRQLTLTGAAPLGVT
                     IGLGRVMDLPRAGWWGGDLHVHMNYGGHYRNTPANLKRQALAEGLHLVENLIVNKEQR
                     IPDLAYWRPGVDPVSSRDFILAHAEEYHTSFWGHSALLGLSEYFVLPNYAGYVNTGAA
                     SLVPMNLDVFDLARAQGAIAGYVHPFDSRPDPSNPNEPIRYEMPIDVALGKLDYFEVM
                     GYSDHRITSEFWYRLLNCGFKIPAAAGTDAFPNYASLRGPPGLVRVYARTDGPLEHHR
                     WLSAIKAGRTFVTNAPILGVRWRTGRRTDGPTDRRTEAGRWLGIGDSVSLSAGSHRLL
                     VQLTLRSNTPVDHLELVRNGKVVADIPLSGDRTRADTLVSLPLDSSGWYVVRAFADRP
                     RLPVLDLYPFGSTSPFYVTVGGAAVRSREDAEYFMTWLDRVRGEVERHTGWNTAAEKE
                     QVMKRIAEARAEFEKRAG"
     gene            complement(2819..4633)
                     /locus_tag="VGA78_05195"
     CDS             complement(2819..4633)
                     /locus_tag="VGA78_05195"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HEX9893295.1"
                     /translation="MPLPAILLTALGFGLATGLIEVGIHLFRKLALGRILAFGMDFVW
                     MTPLANAGVFLLLGVVFLLVALPVRRMRSPAVVYACFGTVMVFGPLLLAGRIHKAAAL
                     VLALGVAVALSRKLTPRAATVTRVMARAVIGLLVIFPLIGMVRYGLLRRAERQAIGSR
                     AAATPGQPNILLLVLDTVRSWDVGFYGYWRPTTPKLGQRLERGVIFDRALAPASWTTP
                     SHAVMFTGYQPTELSASWDTPLDTRQRTLAELFAERGYATGGFVGNYRYAGSATGLQR
                     GFDHYEDYPVTVEQALRSAQLPARAFTLGSIAEQLGKRRLIHGGKDAVDVNTEFLGWL
                     DRLPNARPFFAFLNYFDAHAPYTPPPPWDSAFAGRDLETVERYWTRMEQVFGAGPLPR
                     RFLQETLDAYDGGIAYLDHQIDSLLTQLEARGLLRNTVVILTSDHGEHFGEHGLIQHG
                     NSLFLPLLHVPLAVYAPGLLPGRIRVQAAVTLKDLAATILDLAGVPQAGVPGRSLMAW
                     VRPPFDPARTDTLFAAVDFHRLLPRWPVSPILRGDMRSVVLDSLHYIRNGDGVEELFH
                     LGQDSRETRNLAGQPLFGSELERHRAALARVAGRNSLK"
BASE COUNT          829 a         1612 c         1571 g          738 t
ORIGIN      
        1 ctggaatcgt tcgtagggct tggcatcgga ggcggattcg gtggtcatgg cataacgtgg
       61 ggaaccgagg gcccgttgcg gtaaccaaaa ggacccaaag agaatcgttt ttggcccgcc
      121 cgcccgcccg cccgcccgcc cgcccgcccg gccgtcagac cgtcagtccg tcagagtcag
      181 ccggcccgct tttcaaactc cgccctcgcc tcggcaatcc gcttcatgac ctgctccttc
      241 tccgcggcgg tgttccaccc ggtgtgccgc tccacctccc cgcgtacccg gtcgagccag
      301 gtcatgaagt actccgcgtc ctcccgactg cgaaccgccg ctccgccgac cgtcacatag
      361 aacggactgg tgctcccgaa cggatacagg tccagcaccg gaagccgagg ccggtcggcg
      421 aaggctcgca cgacatacca gccactcgag tcgagcggca aactcaccag ggtatcggcc
      481 cgggtgcggt caccactcag cggaatgtcc gccacgacct tcccgtttct caccagctcc
      541 aggtgatcca ccggcgtgtt ggaccgaagc gtgagttgca ccaacagcct atggctcccg
      601 gcggaaaggg agacggaatc cccaatgccc agccacctcc cggcctccgt ccgccggtcc
      661 gtcggtccgt cggtccgtcg gccagttcgc cacctgaccc ccagaatcgg cgcgttggtc
      721 acgaaggtcc ggcccgcttt gatggcgctc aaccagcggt ggtgctcgag cggcccgtcg
      781 gttcgggcgt atacccggac caggcccggc ggccctcgga gcgaggcgta attggggaat
      841 gcatcggttc ccgccgcggc gggaatcttg aatccgcagt tgagcagccg gtaccagaac
      901 tcggacgtga tccggtgatc gctgtatccc atcacctcga agtaatccag cttgccgagc
      961 gcgacgtcga tcggcatctc atagcgaatc ggctcgttcg ggttggaggg atccggccgg
     1021 ctgtcgaaag ggtgaacgta gccggcgatc gcgccctggg cccgcgccag gtcgaacacg
     1081 tccaggttca tcggcaccag gctggcggcg ccggtgttca catacccggc gtagttgggg
     1141 agcacgaagt actcgctcag accgagcagc gctgaatggc cccagaagct ggtgtggtac
     1201 tcctcggcgt gggccaggat gaagtcgcgc gatgacaccg gatcaacccc cgggcgccag
     1261 taggccaggt cggggatccg ctgttccttg ttgacgatca gattctcgac caggtgcagg
     1321 ccctcggcca gagcctggcg cttgagattg gcgggcgtgt tgcgatagtg cccgccgtaa
     1381 ttcatgtgga cgtggagatc gccgccccac cagccggccc ggggaaggtc catcacccgg
     1441 cccagcccga tggtcactcc gagcggcgcc gcgccggtca gcgtaagctg tctccggccc
     1501 acccggtatt ccggaccctt ccagacctcc acggtgtacc ggcccggcgg cagactgagg
     1561 ctgctgcgcc cggggctgtg gaaatagccg tactcgaaca gccgctcgcc gcgaacgaag
     1621 gcctcgtcgg cgtgacgcca ggcatcgtcg ggcgcccagc tccgctcggt cgagtcgaac
     1681 accgagaccc gggcgggaat cactgtcccg gcggaatcag tgatcgtcag ggcgagaatc
     1741 ccgtaggctt tcagcctgat ccggttgatc ggctggatgg tcgtgtgacg accacccgga
     1801 acctcgacca cgcgaagcac agttcccgcc gcaacccctc tgcagtctgc atcctgcact
     1861 ctgcacgctg cattcgccgt atacaggatt cgccgcgagt cggggctcca tcgcggattg
     1921 gtggcgtcga actcgccgta ggtgagctgg aagggatcgc ccccttcgcc ggtcatcagc
     1981 catagctgat tccactggcg gccatggtag ccgctgtaca ccacccgcct gccgtcgcgg
     2041 gcccaatcgg gtcgcgcctt ccaggtggtc tcctcgtacc acagctctcg catttcggcg
     2101 tcagcgcggg cctccatccg ccagaagccg ccggtgcccc agatccgtcc ccggttcgac
     2161 accaggatca gctcccgcga atccggactc cacgtggggg agaggtaatg atcccaggag
     2221 ctgtagtagt agcggggcag cccgctttgc cggtcctggg tgatgcgcac cggcatgccg
     2281 actcgcccat tctcccacgg cgcgacgaag acatgccagc ggccctgata ggcggtcgag
     2341 acgaaggcga gccgggtacc gtcgggcgag aaccgcgcgt cgagatgtac gccgccgtcc
     2401 cggagcaggg aactctcctg gcctcgctcg agatccaggg cccggagctc cagctggtcg
     2461 tcgtggtagc gggagaacac gacccagcgc ccgtcgggcg accagtcggg ctgatagtcg
     2521 tacccggggc tgtcggtgag ctgccgggtg ctgtcagatc ccacccgctg ccgccagagc
     2581 gatccctgca tgctgtagat caactcggtg ccatcgggcg accaggcggc ggctgagggc
     2641 ccactggtca cctgggggag gtacatctcg cgccagtagt acggatgcgg cacgctgact
     2701 tgcttgagga cgaactcacg caccggggtc tgggaggcca gcggaccgga gatcgccgac
     2761 agtgtgaggc cgcatcccag ggcggtcaat cggtatgtca tggtcatccg agagtgagtc
     2821 atttcagcga attacgaccc gcgactcgtg ccagtgccgc ccgatgccgc tccagctcgc
     2881 tcccgaacag cggttgcccg gccagattcc gggtctctcg cgagtcctgc cccaggtgga
     2941 aaagctcttc gacgccgtcc ccgtttcgga tgtagtgcag gctgtcgagc accaccgagc
     3001 gcatgtcgcc ccggagaatg ggtgagaccg gccagcgcgg cagcaagcga tgaaagtcga
     3061 cggcggcgaa gagggtatcg gtccgggccg gatcgaacgg cgggcgcacc cacgccatga
     3121 gcgaccggcc cggtactccg gcctggggca cccccgcgag atcgagaatg gtggcggcca
     3181 ggtccttcaa ggtgaccgcc gcctgaaccc ggattcttcc cgggaggagc ccgggcgcgt
     3241 agaccgccag cggcacgtgg agcagcggca ggaacagact gttgccgtgc tggatcagcc
     3301 cgtgctcgcc gaaatgctcg ccgtggtcgg aggtgaggat caccacggtg ttccgcagca
     3361 ggcctctggc ctcgagctgg gtcagcagtg aatcgatctg atgatccaga taggcgatac
     3421 ccccgtcgta ggcgtccagg gtctcctgca ggaatcggcg ggggagcggt ccggccccga
     3481 acacctgctc catccgggtc caatagcgct ccacggtctc caggtcccgg cccgcgaacg
     3541 cggaatccca cggcggcggc ggggtgtagg gtgcgtgggc gtcgaaatag ttgaggaacg
     3601 caaagaaggg ccgggcgttc gggagccggt cgagccagcc cagaaactcg gtgttgacgt
     3661 ccaccgcgtc tttgcccccg tggatcagcc gccgcttccc cagctgctcc gcgatggagc
     3721 ccagggtgaa ggcgcgcgcc gggagctggg cggagcggag cgcctgctca accgtgacgg
     3781 ggtaatcttc gtagtggtcg aacccgcgct gcaatccggt ggcgctcccg gcatagcggt
     3841 agttccccac gaatccgccg gtggcataac cccgctcggc gaacagctcg gccagggtcc
     3901 gttgccgggt gtccagcggt gtgtcccagc tggccgataa ctcggtcggc tgatacccgg
     3961 tgaacatcac cgcgtgggac ggggtggtcc acgacgcggg agccagggcc cggtcgaaaa
     4021 tcacgccccg ttccagccgc tgccccagct tgggcgtggt tggccgccaa tagccgtaga
     4081 agcccacgtc ccacgagcgc accgtgtcga gcaccaggag gaggatgttg ggctggccgg
     4141 gggtcgccgc tgcgcgcgac ccgatcgcct gccgctcggc ccgccggagc aggccatatc
     4201 ggaccattcc aatcagggga aagatcacca gcaacccgat gacggcccga gccatcaccc
     4261 gagtcaccgt ggcggcgcgg ggcgtcagtt tacgcgacag ggccaccgcg acgcccaggg
     4321 ccaagaccag tgcggccgcc ttgtgaatcc gtcccgccag cagcagcggc ccgaacacca
     4381 tgaccgtgcc gaagcaggcg tagaccacgg cgggggatcg catccggcgc accggcagcg
     4441 ccaccagaag gaacaccaca cccagcagga gaaagacgcc cgcgttggcc aatggcgtca
     4501 tccagacgaa atccatcccg aaagccagga tccggcccag cgccagtttc cggaacagat
     4561 ggatccccac ttcgatcagg ccggtggcaa gcccgaaacc gagggcagtc agcagaatgg
     4621 cgggaagggg catgggtcta caaaactaga cggaccgacg gacggacggg cagacggtcc
     4681 tgtctcggtc ggtcagtcgg tcagtcggtc agtcggtccg tcagtccgac agtccgtccg
     4741 cccgtccgcc
//
LOCUS       DASWKS010000178         6143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_453516, whole genome shotgun sequence.
ACCESSION   DASWKS010000178 DASWKS010000000
VERSION     DASWKS010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453516"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VGA78_05200"
     CDS             <1..252
                     /locus_tag="VGA78_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893296.1"
                     /translation="AILSQVQGDRRRIYTARYALLIKGRQRGGFEWGLDEVGSGPLEA
                     LEELLALVPVRGVEDEPPLPIEVAAWFPASEEGPGERGG"
     gene            236..727
                     /locus_tag="VGA78_05205"
     CDS             236..727
                     /locus_tag="VGA78_05205"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX9893297.1"
                     /translation="MNVGVDTDLAPLREQFARYLRDRRLPFTRQRLEIADALTRVPDH
                     PSVIRIQQELARRGVPVGTATVYRTLDLLVESGLVRAHDFGDGFKRFEPAPDQARHEH
                     LICQRCGRVVEFTNDRLERMLEMIADELSFLHRRHRVEIYGLCVECRGRDLAALRPAG
                     GPS"
     gene            724..1452
                     /locus_tag="VGA78_05210"
     CDS             724..1452
                     /locus_tag="VGA78_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEX9893298.1"
                     /translation="MTDSVSLGAAVAFLAGLLSFLSPCVLPLVPSYLGFVTGFTLEEM
                     TGRRRMAMIHSLLFVAGFSLVFILLGASATALGRVLRYYQDWVTRIGGILIIFFGLYL
                     VGIIKLRFLEQEQRMHLDRKPLGYLGSVLVGMAFGAGWTPCIGPLLGAILGLAASQAD
                     VQRGILLLASYSAGLAVPFLLTAFAVESFLGWFKNFRRYMPLVQKSSGVLLLLVGALM
                     VTGQFTRLAGWLQGLTPEFLRRWL"
     gene            1619..2431
                     /locus_tag="VGA78_05215"
     CDS             1619..2431
                     /locus_tag="VGA78_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893299.1"
                     /translation="MTMNKMLAFSFALVAVGCGRNDREAAADSTALALVPPDTTQYVS
                     PQELPPAPPPAAAAQPAPPPARTPVRPSPPPRTADPAPAPPPAAQPQPSAPLVARAGT
                     EIVSTTNSEVSTRRNKVGETFTSNVTESVSDASGRTVIPAGATLTFRIIESKEAEGRD
                     KPGTLVVLPLSVTTGGKTYDINAEITDLQYELKGRGVTAGDAGKVAAGAAVGAIVGQI
                     LTKKTGGTVVGGAIGAAAGTAIAIKSADKDIVVPAGGRVVIKLKESLTRAAD"
     gene            complement(2666..4375)
                     /gene="ggt"
                     /locus_tag="VGA78_05220"
     CDS             complement(2666..4375)
                     /gene="ggt"
                     /locus_tag="VGA78_05220"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9893300.1"
                     /translation="MRIRLPWLFLLGIAGGCSRPVAPAPPAAATAWPYRTRVTPVDGA
                     QAMVVSGSPIASGVGRDILRQGGNAVDAAVAVGFALTVVHPEAGNIGGGGFMMIRQKD
                     GSVTSVDYRETAPAAATRDMYLDAQGNVTDQSITGHLSVGVPGAVAGLAEAHRRFGKL
                     PWRDLVEPAIALARNGFVIDTFRSRSIGADSARLSQFPASAAIFLPGGHRPAPGTTLR
                     QPELALTLEAIRDSGPAGFYRGRVADLLVEEMLRGGGLITHADLAGYQARWRDPIRIS
                     YRGHTIYSMGPASSGGVTLGLILNVMERWDRLPGFGTADLLHLEAEAMRRAFMDRNRW
                     LGDPDFVTMPLGRLLSKEYAAGLQRQIDPARATPTPPFDKANEGESTTHYSVVDAEGN
                     AVSTTTTLNNSYGSGVTVAGGGFLLNDEMDDFASAPGKPNMFGLVQGEANAIAPGKRM
                     LSAMTPSIMLDPAGRLELLLGTPGGPTIITQVYHIISNVIDHGMSLSDAMAAPRTHHQ
                     ALPDRLHLERGFGADVIAALEARGHVVQTVGNIGDVAAIIRTKQGWQGVADPRRGGGA
                     VGY"
     gene            4492..5412
                     /gene="murQ"
                     /locus_tag="VGA78_05225"
     CDS             4492..5412
                     /gene="murQ"
                     /locus_tag="VGA78_05225"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: protein motif:HMM:NF009222.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEX9893301.1"
                     /translation="MTDAGLRLTERRNPSTQRIDAATPLEIVDLIAVEDAAVPVAVQR
                     ARQEIARAMELIEASFRLGGRLLYIGAGTSGRLGVLDASECPPTFGTPPGMVVGIIAG
                     GFAALIKSAEGAEDDVNAGIAAMDTHQVGAKDTVVGIAASATTPYVRAALGRAQTLGA
                     RTVLLTCAEPPALLRETVDVCIVVLTGPEVVTGSTRMKAGTATKLVLNTLTTGAMIRV
                     GKTYGNLMVDLQAWSQKLVDRGERIVMEVTGADRSSARRAIDAAGGSVRTAIVMLARS
                     VSRDEAQALLAAHDYHLRPILGDPPVVRDP"
     gene            5409..>6143
                     /locus_tag="VGA78_05230"
     CDS             5409..>6143
                     /locus_tag="VGA78_05230"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX9893302.1"
                     /translation="MTERPSLGVGLMSGTSLDGMDAALVRFERPTRASLLAFATRPYT
                     AAERLRIEQAISHGSARELALLHAQLAHWAADAVQAVLDAGAVLPSDLDFIAFPGQTI
                     WHEPPSVTWQLGEPALLAERFGTRIVSGFRARDLAAGGEGAPLVPVADVLLFGAPDGG
                     RILLNIGGMANLTYVPQLAVDQGAFAFDTGPGVALIDAIARLVDPSRPFDQDGALAAQ
                     GRVDTGLLSRLLADEYFEAPPPKSTGR"
BASE COUNT          921 a         2064 c         2123 g         1035 t
ORIGIN      
        1 gcaattctgt cgcaggtcca aggcgaccgc cgccggatct ataccgctcg gtacgcgctg
       61 ctgatcaagg gccgccagcg cggaggattc gaatgggggc tggatgaagt gggatctggt
      121 cccctggagg cgctggagga actgctggcc ctggtcccgg tccggggggt ggaggacgaa
      181 ccgcccctcc cgatcgaggt ggcggcgtgg ttccccgcat ctgaagaagg accgggtgaa
      241 cgtgggggtt gacaccgatc tcgcgccgct ccgggaacag ttcgcccggt atctgagaga
      301 ccggcggctc ccgttcaccc ggcagcggct ggagatcgcc gacgcgctca cccgggtgcc
      361 cgatcatccc tcggtaatcc ggattcagca ggagctggcc cgccgcgggg tgccggtcgg
      421 tacggccacg gtgtatcgca ccctggacct gctggtggag agcggtctgg tgcgggccca
      481 cgatttcggc gacggcttca agcggttcga gcccgcgccg gaccaggcgc gacacgagca
      541 tctgatctgc cagcggtgcg gccgggtggt cgagttcacc aatgaccggt tggagcggat
      601 gctggagatg atcgcggatg agctgtcgtt cctccatcgg cggcaccggg tggagatcta
      661 cgggctctgc gtcgaatgcc ggggacgcga cctcgccgcg ctccggccgg ccggcggccc
      721 gtcatgaccg attcggtgtc cctcggcgcc gccgtcgcct tcctcgccgg cctgctcagc
      781 tttctctcgc cctgtgtgct cccgctggtc ccgtcctatc tcggattcgt caccggcttc
      841 accctggagg agatgaccgg ccggcggcgg atggccatga tccattcgct gctcttcgtg
      901 gccgggttct cgctggtctt catcctgtta ggcgccagcg ccacggccct ggggcgggta
      961 ctccggtact accaggactg ggtgacccgg atcggcggga tcctgatcat cttcttcggg
     1021 ttgtacctgg tcggcatcat caagctgcga ttcctggagc aggaacagcg catgcacctc
     1081 gatcgcaagc cgctgggcta tctgggatcg gtcctggtgg gcatggcgtt cggggcgggg
     1141 tggaccccct gcatcgggcc gctgctcggc gccattttgg gactggccgc gtcccaggcc
     1201 gacgtccagc ggggtatcct gctcctcgcc agctactcag ccgggctggc ggtgccgttc
     1261 ctcctgacgg cgttcgccgt ggaaagcttc cttggctggt tcaagaattt ccgtcgctac
     1321 atgccgctgg tgcagaagag ctccggggtg ctgctgctgc tggttggcgc cctgatggtc
     1381 acgggtcaat tcacccggct cgccggatgg ttgcagggac tgaccccgga gttcttgcgg
     1441 cgatggctgt gatgcaggaa accgcggcgc tggtgattcg acaaattgtg ccagggttga
     1501 taagcctgtg cataggtctc ctcgctgggg cgtccacgga taagaggggt agcgcagttt
     1561 gctgcctcca tcgcctttcg cccatcgtca cgtctgaaag acgccattgg aggcgccagt
     1621 gaccatgaac aagatgctcg cattcagttt cgccctggtg gcggtcgggt gcggcaggaa
     1681 cgaccgggag gcggcggctg attcgaccgc gttggcattg gttccgccgg atacgactca
     1741 gtacgtatcc ccgcaggaac tgccgccggc gcctccgccg gctgctgcgg cccagcccgc
     1801 tccaccgccg gcccgtaccc cggtgcggcc ttccccgccc cctcggaccg ccgacccggc
     1861 cccggcgccc ccgccggcgg cgcagcctca accctcggcg ccgctggtgg cccgggcggg
     1921 gaccgagatc gtctccacca ccaattccga ggtgtccacc cggcgcaaca aggtgggtga
     1981 gaccttcaca tcaaatgtga ccgagagcgt gtcggatgcg tccggacgga ccgtcattcc
     2041 ggcgggagcc acgctgactt ttcgcattat cgaaagcaag gaagccgagg gccgtgacaa
     2101 gcccggcacg ctggtggtgc tgccgctgag cgtgacgacc ggcggcaaga cctacgatat
     2161 caacgccgag attaccgacc tgcagtacga gctcaaggga cggggtgtga ccgccggtga
     2221 cgccgggaaa gtggcggccg gcgcggccgt cggtgccatt gtggggcaga tcctcaccaa
     2281 gaagaccggc gggacggtag tgggtggtgc catcggcgcc gcggccggga cggccatcgc
     2341 catcaagtcg gccgacaagg acatcgtggt tccggctgga ggccgggtag tcatcaagct
     2401 caaggagtcg ctcacccgtg ccgcggactg agccggcacc ctagcgacgg aggctgaaac
     2461 atagaggcag agggtacagg gcaaagcgta tcggtgcagg atgaggcatc tccccccaac
     2521 tcattatcct gtactccacg gttttgctcc aaggccctct gtccctgttt gcaaaatgca
     2581 gaatgcccag tgcccaatgc cattgcagag gtgttccttc cccccaaact tctgctatgg
     2641 gaattgggca ccgggcattc tgccttcagt acccgacagc tcctcctccc cgcctcggat
     2701 cggccacgcc ctgccatcct tgtttggttc gaatgatcgc ggcgacgtcg ccgatattgc
     2761 cgaccgtctg gaccacgtgg ccccgcgctt cgagggccgc gatgacatcg gcgccgaagc
     2821 cccgctccag gtgtagccga tcgggcagcg cctgatggtg ggtccgcggc gcggccatcg
     2881 cgtcgctcag gctcatcccg tggtcgatga cgttggaaat gatgtgatag acctgcgtga
     2941 tgatggtggg accacccggc gtgcccagca gcagctcgag ccggccggcg ggatcgagca
     3001 tgatggacgg cgtcatggcc gacaacatcc gtttccccgg cgcgatcgca ttggcctcgc
     3061 cctgcaccag cccgaacatg ttgggctttc ccggcgccga ggcgaagtcg tccatctcgt
     3121 cgttgagcag gaatcctccc cccgccacgg tcacgccgct gccatacgag ttgttgagtg
     3181 tggtcgtggt cgacaccgca ttgccctcgg cgtcgaccac ggagtaatgg gtggtggact
     3241 cgccttcgtt cgccttgtcg aatggtggcg tgggggtggc ccgggcgggg tcgatctggc
     3301 gttgtagtcc cgcggcgtat tccttggaga gcagccggcc gagcggcatg gtcacgaaat
     3361 cgggatcacc cagccagcgg ttgcgatcca tgaaggctcg ccgcatggcc tccgcctcca
     3421 ggtgcaggag atccgcggtc ccgaagcccg gcaggcgatc ccaccgttcc atcacgttga
     3481 ggatgagccc cagcgtcacc cctccgctgg aagccggacc catcgagtag atggtgtgcc
     3541 cccggtagga aatgcggatg gggtcacgcc aacgggcttg gtagcccgcc agatcggcgt
     3601 gggtgatgag cccgccgccc cgcagcattt cctccaccag cagatccgcg acccggccgc
     3661 ggtagaaacc cgccggcccg ctgtcgcgga tggcctcgag ggtcagcgcc agctccggct
     3721 ggcgcaacgt ggtgccgggg gcgggccggt ggccccccgg gaggaagatc gcggccgagg
     3781 cggggaactg tgacagacgg gcggaatcgg ccccgatgga ccggctccgg aacgtgtcga
     3841 tcacaaaacc gtttcgcgcc agcgcgatgg cgggctccac caggtcgcgc cagggcagct
     3901 tgccgaaccg gcggtgggcc tccgccagtc cggcgacagc tcccgggacg cccaccgaga
     3961 ggtgccccgt gatactctgg tcggtgacgt tgccttgggc gtcgaggtac atgtcgcggg
     4021 tggcggccgc cggggcggtc tcacggtaat ccacgctggt gacgcttccg tccttctgcc
     4081 ggatcatcat gaagccgccg ccgccgatgt tgccggcctc gggatggacc acggtgagcg
     4141 cgaacccgac ggctaccgcg gcgtcgaccg cattgccgcc ctgtcgcagg atgtcgcggc
     4201 ccaccccgct cgcgatcggg ctgcccgaga ccaccatcgc ctgggcgccg tctaccgggg
     4261 tgacccgggt ccggtagggc caggcggtcg cggcggcggg cggtgccgga gcgaccgggc
     4321 gactgcagcc ccccgcgatg cccagcagga acagccatgg aagacggatt cgcaccaaat
     4381 cctcgtgggg tcgtggtcct attaagttag caggtcttcg cttcgctcca ccgacgacta
     4441 acccctgacg actgaccccc ttacggtcga tatccgaatg gctgaccgct catgaccgac
     4501 gccggactgc ggctgaccga gcgtcgcaac cccagcaccc agcgaatcga cgcggccact
     4561 ccgctcgaga tcgtggatct gatcgctgtc gaggacgccg cggtcccggt cgcggtccag
     4621 cgcgcccgcc aggagatcgc gcgggcgatg gagctcatcg aagcgtcgtt ccgcttgggc
     4681 gggcggctgc tctatatcgg cgccggtacc agcggccgcc tgggggtctt ggacgcctcg
     4741 gagtgcccgc ccaccttcgg cacgcctccc ggcatggtgg tcggaatcat cgccggtgga
     4801 ttcgccgcgc tgatcaagtc ggccgagggg gccgaggacg acgtgaacgc gggcatcgcg
     4861 gccatggaca cccaccaggt gggcgccaag gacaccgtgg tgggcatcgc cgcgagcgcg
     4921 accacaccct atgtccgcgc ggcgctcggc cgggcccaga ccctgggcgc gcggaccgtg
     4981 ctgctcacct gcgccgaacc gcccgcgctg ctgcgcgaga cggtggatgt ctgcatcgtg
     5041 gtgctcaccg ggcccgaagt ggtgaccggc tccactcgca tgaaggcggg gaccgccacc
     5101 aagctggtgc tcaacaccct gaccaccggc gcgatgatcc gggtcggcaa gacgtacggc
     5161 aatttgatgg tcgatctgca ggcctggagc cagaagctgg tggaccgggg cgagcgcatc
     5221 gtgatggagg tcaccggcgc cgaccgctcc tcggcccgcc gcgccatcga tgccgcgggc
     5281 ggcagcgtgc ggaccgcgat cgtgatgctg gcgcggagcg tcagccggga cgaggcccag
     5341 gcgttgctgg ccgcgcacga ctaccacctc cggccgattc tcggcgatcc gccggtggtt
     5401 cgcgacccat gaccgagcgg ccgtcgctgg gggtggggct gatgtcgggc acctcgctgg
     5461 acggcatgga cgcggcgctg gtgcgattcg agcgtcccac tcgggccagt ctgctggcct
     5521 tcgcgacccg gccctacacc gccgccgagc ggctccggat cgagcaggcc atcagccacg
     5581 gcagcgcgcg ggagctggcg ctgctccatg cccagctggc ccattgggcc gccgacgcgg
     5641 tccaggccgt gctcgatgcc ggggcggtgc tgccgtccga tctcgacttc atcgcctttc
     5701 ccggtcagac catctggcat gaaccgccca gcgtcacttg gcagctggga gagccggcct
     5761 tgctggccga gcggtttggc acccgcatcg tgagcggatt cagggcccgg gatctggcgg
     5821 ccgggggcga aggcgctccg ctggtcccgg tcgctgatgt cctgctcttc ggggcgcccg
     5881 acgggggccg gatcctgctc aacatcggtg ggatggcgaa cctgacctac gtgccgcaac
     5941 tggcagtgga ccagggtgcg tttgccttcg ataccgggcc gggagtcgcg ctgatcgatg
     6001 ccatcgcccg gctggtcgat ccctcgcgtc ccttcgatca ggatggagcc ctcgcggccc
     6061 aggggcgagt cgacaccggc ttactgtccc ggctcctggc ggatgagtac ttcgaagccc
     6121 caccgcccaa gagcacgggc aga
//
LOCUS       DASWKS010000179         3912 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2675433, whole genome shotgun sequence.
ACCESSION   DASWKS010000179 DASWKS010000000
VERSION     DASWKS010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2675433"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /locus_tag="VGA78_05235"
     CDS             <1..1048
                     /locus_tag="VGA78_05235"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminomethyltransferase family protein"
                     /protein_id="HEX9893303.1"
                     /translation="AVFDVSPLCKYLVGGRDAARLLDRMVTRDVLKCRVGQVLYTPWC
                     DVHGKIIDDGTISRLDDTTFRLTSAEPTRRWLSMNAVGLEVSLEDVSELTGALALQGP
                     LSRDILQRLSPADLSQLKYFRLIHTTLRDIPVTVSRTGYTGDLGYELWVDAARAVELW
                     DALIEAGGPFGIVPAGIWALDVARIEAGLVMLDVDYHSAHRAVIEAQKSSPWELNLGW
                     TVSLEKGPYNGRRALTLEKTRGPAWSFVGLEVNWESLERRYQVHGLPPHLPTVAWRVS
                     TPIYRDGEQIGYASSGCWSPLLKQYLALAHLRAPHFEPGTKVQMEVTVEHHRKEADAV
                     VRPLPFFDPERKRA"
     gene            1045..2634
                     /locus_tag="VGA78_05240"
     CDS             1045..2634
                     /locus_tag="VGA78_05240"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9893304.1"
                     /translation="MTANSYDAIIIGGGHNGLVTAAYLARAGKKTVVLERRPVLGGAA
                     VTEEIFPGFKFSVFSYVVSLLRPEIIRDLDLPRHGLQILPLESTITPLDNGDYLGSWA
                     DPDETRRELCRHSPRDAEATVLFGRLMQHMAMAVKPILGMVPPDPASLAPSDLAGLLK
                     LGGHFRSLGAERFHALFKLMTMSSADYLDEWFEFDPLKATKSASGIIGTFLGPRSPGS
                     AYVLLHHYMGEIDGAFRAWGFQKGGTGAISNAIAGAARAFGAEIRTDAGVERVLLNGD
                     RATGVALANGEELSAPLVVSSLDPRLTFTRLVDEKQLPGDLVEGVRRYKFRGSSGKVN
                     LALDGLPDFTCLPGNGPHLRGAVSVSPSLAYLERAYDDAKYGEFSRNPYMDIVIPSMI
                     DPQMAPPGKHVMSIFVQYAPYHLNGGWNDAKRDAFGDAVVDTLARYAPNIKSLILHRQ
                     VLTPADIERITGLSEGNIFQGELALHQLFFLRPVPEWAKYRTPLRGYWQCGAGTHPGG
                     GIMGASGRLAALEILRATRKS"
     gene            2631..3608
                     /locus_tag="VGA78_05245"
     CDS             2631..3608
                     /locus_tag="VGA78_05245"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX9893305.1"
                     /translation="MTRTLVIGGTLFIGRALVEQLLARGDDVVIMHRGQGTPQGDRVR
                     EIRCDRNDVPAVQAELARESFDVVFDNVYDWQRGTTAEMVAAAARAAAEGGKLKRYVF
                     TSSMAVYGSGLEHDEQDPLVPADHPAAYYGQKAESERALFRLGREEGVPVATLRPAFI
                     YGPNNPFDREAFFWDRIVAGRPVIVPGDGSRPMQWVHVRDVARAALLAAGHDAASGSA
                     YNLAGPPLTQAEFVQALARAAGDSVRLVPVPRERLESAGGSLMTPPLYFGAFLDLPPI
                     TVKTDRVRAELGLVLTPLEEGLQETFSWYQRQQRVKPDFAWEDRLIETA"
     gene            3605..>3912
                     /locus_tag="VGA78_05250"
     CDS             3605..>3912
                     /locus_tag="VGA78_05250"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX9893306.1"
                     /translation="MSTPFDAIVIGAGINGLVASATLGRAGLRVLLVDRGAATGGEAR
                     AMQFAEGYRAAPLTLDFGWLPPAVASGIGLDTRGSFASSEIASAVTLGDGQWLTLPRD
                     A"
BASE COUNT          614 a         1318 c         1336 g          644 t
ORIGIN      
        1 ggcggtgttc gatgtgtcac ccctctgcaa gtatctggtg ggcggccggg acgcggcccg
       61 tttgctggac cggatggtga cccgcgacgt cctgaaatgc cgggtgggcc aggtcttgta
      121 cacgccctgg tgcgacgtcc acggcaagat catcgacgat ggcaccatca gccggctgga
      181 tgacacgacc ttccggctca ccagcgccga gcccactcgg cggtggctca gcatgaacgc
      241 ggtgggtctc gaggtgagcc tggaagacgt gtcggagctg accggcgcgc tggcgttgca
      301 gggcccgtta tcgcgcgaca tcctgcagcg gctctcgccg gccgatttga gccaactcaa
      361 gtatttccgc ctgatccata ccacgctgcg ggacattccg gtcacggtct cccggaccgg
      421 ctacaccggc gacctgggct acgagctctg ggtcgatgcc gctcgcgcgg tggagctgtg
      481 ggacgcgctg atcgaggccg gtggcccgtt cggcatcgtg cccgccggga tctgggccct
      541 ggacgtggct cgcatcgagg ccgggctggt catgctggac gtcgactacc actcggcgca
      601 tcgcgcggtg atcgaggccc agaaatcctc gccttgggag ctcaacctgg gctggaccgt
      661 gagcctcgag aaaggaccgt acaacggccg acgggctttg accctggaga agacgcgggg
      721 accggcgtgg tcgttcgtgg gtctcgaggt caactgggaa tcgctggaac gccgctatca
      781 ggtacacggc ctgccgcccc accttcccac cgtcgcctgg cgggtgagca cccccatcta
      841 ccgcgatggg gagcagatcg gctacgcctc cagcggctgc tggtcgcccc tgctcaagca
      901 atacctggcc ttggcccatc tgcgggcgcc ccatttcgag cccggcacca aggtgcagat
      961 ggaagtgacg gtggagcacc atcggaagga agccgacgcg gtggtgcggc cgctcccgtt
     1021 cttcgacccg gagcggaagc gggcatgacc gccaacagct acgacgccat catcatcggg
     1081 gggggccaca acggcctggt gaccgcggcc tatctggccc gggcggggaa gaagaccgtg
     1141 gtgctggagc gccgtccggt gctggggggc gcggccgtca ccgaagagat tttccccggc
     1201 ttcaagttct cggtcttttc gtatgtagtg agcctgctcc ggcccgagat cattcgcgac
     1261 ctggaccttc cccgccacgg cctgcagatc ctgccgctgg agagcaccat cacgccgctc
     1321 gacaacggcg actacctggg ctcctgggcc gatcccgacg agacccgccg cgagctgtgc
     1381 cgccattcgc cccgcgacgc ggaagccacc gtgttgttcg gccgcctgat gcagcatatg
     1441 gcgatggcgg tgaagccgat cctgggcatg gtcccgcccg atcccgcctc gctggccccc
     1501 tccgacctcg ccggattgct caagctgggt ggacacttcc gctcgctcgg cgccgagcgc
     1561 tttcacgcgc tcttcaagct catgaccatg agcagcgccg attatctgga cgaatggttc
     1621 gagttcgatc ccctcaaggc caccaagtcc gccagcggga tcatcgggac tttcctgggc
     1681 ccccgttcac ccggctcggc ctacgtcttg ttgcaccact acatgggcga gatcgacggt
     1741 gcgtttcgcg cctggggctt tcagaagggc ggcaccggcg ccatcagcaa cgcgatcgcc
     1801 ggtgccgcgc gggccttcgg cgccgagatc cggaccgatg ccggggtcga gcgagtcctg
     1861 ctgaacggcg atcgggccac cggggtagca ctggcgaacg gtgaagagct gagcgccccg
     1921 ctggtggtgt ccagtctcga tccccgcctc accttcaccc ggctggtcga tgagaagcag
     1981 ctgcccggcg acctggtgga aggggtacgg cgctacaagt tccgcggctc atcgggcaag
     2041 gtgaacctgg ccctcgacgg cctgcccgac ttcacctgcc tgccgggcaa cggtccgcac
     2101 ctccggggag cggtctccgt cagccccagc ctggcctatc tggaacgggc ctacgacgac
     2161 gccaagtacg gcgagttctc ccgcaacccg tacatggaca tcgtgatccc gtcgatgatc
     2221 gatccccaga tggcaccgcc cgggaagcac gtgatgagca tcttcgtcca atatgcgccc
     2281 tatcatctca acgggggctg gaacgacgcg aagcgggacg ccttcggcga cgcggtcgtg
     2341 gacacgctgg cccgctacgc gccgaacatc aaatcactga tcctgcaccg ccaggtgctg
     2401 accccggccg acatcgagcg catcaccggc ttgtccgagg gaaacatttt ccagggagag
     2461 ctggcgctgc accagctctt cttcctgcgg ccggtcccgg agtgggccaa gtaccgcacc
     2521 ccgctccggg gctactggca gtgcggcgcc ggcacccatc ccggcggcgg catcatgggc
     2581 gcctcgggcc gattggcagc gctcgagatc ctccgggcaa cgaggaagtc atgacccgaa
     2641 ccctggtgat cggcggcacg cttttcattg gacgggcgct ggtggagcaa ctgctcgcgc
     2701 ggggcgacga tgtggtcatc atgcaccggg gacaaggcac gccccagggc gaccgggtgc
     2761 gcgaaatccg ctgcgaccgc aacgacgtcc ccgcggtgca ggccgaactg gcgcgtgagt
     2821 cgttcgatgt ggtcttcgac aacgtatacg actggcagcg tggcacgacc gccgagatgg
     2881 tcgcagccgc cgcgcgcgcg gcggctgagg gaggaaagct caagcggtac gtcttcacct
     2941 ccagtatggc agtgtacggc agcggcctcg aacacgacga gcaggatcca ctggttcctg
     3001 ccgaccatcc ggccgcctat tacggccaga aggcggagag cgagcgcgcg ttgttccggc
     3061 tgggccggga ggaaggggtt ccggtcgcaa cccttcgacc ggcgttcatc tacggcccga
     3121 acaacccgtt tgaccgcgag gccttcttct gggatcgcat cgtggcgggc cgcccggtga
     3181 tcgtgcctgg agacggttcg cgccccatgc aatgggtgca cgtccgggac gtggcgcgcg
     3241 ccgccctcct ggctgccggg cacgatgccg ccagcggctc ggcgtacaac ctggccggtc
     3301 cgccgttgac ccaggcagag ttcgtccagg cccttgcgcg ggcggcaggc gattcggtgc
     3361 gcctggtgcc agtaccgcgg gagcggctcg agagcgccgg cggaagcctg atgacacctc
     3421 cgctctattt cggcgcgttc ctcgacctgc caccgatcac cgtgaagacg gaccgggttc
     3481 gcgcggagct cggcctggtg ctgacaccgc tggaggaagg tctccaggag accttctcgt
     3541 ggtatcagcg gcagcagcgg gtgaagccgg acttcgcctg ggaagaccgt ttgatcgaga
     3601 ccgcatgagc accccgttcg acgcgatcgt catcggcgcc ggcatcaatg gcctggtggc
     3661 ttcggccacc ctgggccggg ccgggctgcg cgtgctgctg gtggatcggg gggcagccac
     3721 cgggggtgaa gcccgggcga tgcaattcgc ggaggggtac cgcgccgcgc cgctgaccct
     3781 ggacttcggt tggctgccac cggccgtcgc gagcggcatc ggtctcgaca cgcgggggag
     3841 ctttgcgtcg tccgagatcg cgagcgcggt gacgctgggg gacggccagt ggttgaccct
     3901 cccgcgcgac gc
//
LOCUS       DASWKS010000180         1706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1567710, whole genome shotgun sequence.
ACCESSION   DASWKS010000180 DASWKS010000000
VERSION     DASWKS010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567710"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VGA78_05255"
     CDS             <1..270
                     /locus_tag="VGA78_05255"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9893307.1"
                     /translation="IAIDNQEPPRRFDMTVDANGKFGFTRGIANVSLLPEGDATRMEY
                     RAELQVGGKIASVGQRLLDMVSRTMLRSGLEALGKEVRRRLESGS"
     gene            267..1172
                     /locus_tag="VGA78_05260"
     CDS             267..1172
                     /locus_tag="VGA78_05260"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX9893308.1"
                     /translation="MKPAPFDYHAPSTTDEALELLQRYGPEAKPLAGGQSLVPAMNFR
                     LAQPGVLVDLNRITDLAGIHTGDGGSLRIGAMTRQRALERSHLVTTRAPLLAEAMPHV
                     AHPPIRNRGTAGGSLAHADPASELPAVMTALGARFRLRSREGERWIPAADFFFGLFAT
                     ALEPGELLVEIEIPAPAPRTGFAFMEIARRHGDYALAGIAARLELDPAGRCSDVRMVL
                     FGVGEGPVSVAAAEALVRGESPSEEVFAAAAALVERALDPPGDIHATSAYRRRLAGVL
                     TRRALARAVRRADGLTGERTGGRLD"
     gene            1181..>1706
                     /locus_tag="VGA78_05265"
     CDS             1181..>1706
                     /locus_tag="VGA78_05265"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HEX9893309.1"
                     /translation="MVVDGALTADDLSNADLAPTPPAARAWNHWHFASLWVGMSVCIP
                     TYMLAASLIEAGLNWWQSLAAIFLGNAIVLVPMLVNGHAGTRYGIPFPVYARAAFGTT
                     GAHIPALLRSIVACGWFGIQTWVGGLAISELLGIAWPAFRQLGGEWAFMGYGLPAFLG
                     FVIFWLINLYFVWAG"
BASE COUNT          242 a          554 c          606 g          304 t
ORIGIN      
        1 atcgccatcg acaatcagga gccgccccga cgttttgata tgacggtcga tgccaatggc
       61 aagttcggtt tcacccgggg catcgcgaac gtctcgctgc tgcccgaagg cgacgcgacc
      121 cgcatggagt accgagccga gctgcaggtt gggggcaaga tcgcctcggt ggggcagcgc
      181 ctgctcgaca tggtgagccg gaccatgctg cgctccgggc tcgaggcgct ggggaaggaa
      241 gtccgacgcc ggttggaatc gggctcatga aaccggcccc tttcgactat cacgcgcctt
      301 ccaccaccga cgaggccctg gaactgctcc agcggtacgg gcccgaggcc aagccgctgg
      361 ccggcggaca gagcctggtg ccggccatga acttcaggct ggcccagccc ggcgtgctgg
      421 ttgatctcaa ccggatcacc gacctggccg ggattcacac aggtgatggc gggagcctcc
      481 gcatcggtgc catgacccgg cagcgagcgc tggagcggtc tcatctggtg acgacacgag
      541 cgccgctgct ggccgaggcc atgccgcatg tcgcgcatcc tccgatccga aaccggggca
      601 cggctggcgg cagtctggcc catgccgacc cggccagcga gcttcccgcc gtgatgactg
      661 cactgggggc gcgcttccgg ttgcggagcc gggagggcga acggtggatt ccagcggccg
      721 acttcttttt cggtctgttt gcgacggcgc tcgagccggg tgagctgctg gtggaaatcg
      781 agatcccggc cccggcgccg cggaccggct ttgcattcat ggaaattgcg cggcggcacg
      841 gcgactacgc actcgccggc atcgccgccc gcctggagct cgacccggcg ggccgctgct
      901 ccgacgtcag aatggtgctg ttcggcgttg gcgaaggacc ggtctcggtc gcggcggcgg
      961 aggcgctggt gcggggtgaa tcgccttccg aggaagtctt cgccgccgcc gccgcccttg
     1021 tggagcgggc gctcgatcct cccggcgaca tccatgcgac ctcagcctac cggcgccgac
     1081 tggcgggggt cctgacgcgg cgtgctctgg cgcgggcggt ccgacgcgcc gacggactga
     1141 cgggcgaacg gacaggcgga cggcttgatt gagtgaaccg atggtagtcg atggtgcgct
     1201 tacggccgac gatctttcca acgccgacct ggcgccgacg ccacccgcgg cccgtgcctg
     1261 gaaccactgg cacttcgcat cgctctgggt ggggatgagc gtctgcattc ctacctacat
     1321 gctggccgcc agtctcatcg aggcggggct caactggtgg cagagcctgg ccgcgatctt
     1381 tctgggcaac gccatcgtcc tggtgccgat gctggtgaat ggccatgccg ggacccgcta
     1441 cgggattccg ttcccggtgt atgcccgtgc ggccttcggc acgacggggg cgcacattcc
     1501 ggcgctgctt cggtccatcg tggcgtgcgg ctggttcggg attcagacct gggttggcgg
     1561 gctggcgatc agcgagttgc tcggcatcgc ctggcctgcg tttcgccagc tgggcgggga
     1621 atgggccttc atggggtacg gcctgccggc gtttctcgga ttcgtgatct tctggctgat
     1681 caacctctat ttcgtgtggg ccggca
//
LOCUS       DASWKS010000181         2128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2675898, whole genome shotgun sequence.
ACCESSION   DASWKS010000181 DASWKS010000000
VERSION     DASWKS010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2675898"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1513)
                     /locus_tag="VGA78_05270"
     CDS             complement(<1..1513)
                     /locus_tag="VGA78_05270"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEX9893310.1"
                     /translation="MTVDIFIRGGRVFDGGGGPPVEIDIAIQGDRIISVGRDVSPREA
                     HRVIDARGLAVCPGFVDIHGHSDYHLLLTPTAESAVLQGVTSEIGGNCGYAAAPIWGP
                     WWEDRAKSYRDVYGLDHGWHDVAAYFRRLLDVGISINFGLLIGHNTLRGSAMGGADRA
                     PSPAEMEAMVAALERGMGEGALGLSTGLVYSPACFSPPEELATLTAVAGRRGGVLATH
                     MRSEGDGLLEAIREVIAAAEAARTPLQISHLKTYGERNWGKLTQAFELIEAAQRRGVD
                     VTADRYPYTAANTGLQAALPRWALEGSKAEQTARLGDPTVRSRIRQEIGEGPNARDWS
                     QVMISEVTQPENRRYQGLRVDAAARVAGKETLTFVLDLLQEEQTQVDAIYFTMSEENL
                     QAILRKPYVMIGSDSGCRAHYGPLSTGRPHPRTFGSFARVLGHYSRDARLFDLSTAIR
                     KMTSDPCRRMGLADRGWIRPGNAADIVLFDPDHIRDTATYEEPIRYPAGVHMVL"
     gene            complement(1582..>2128)
                     /locus_tag="VGA78_05275"
     CDS             complement(1582..>2128)
                     /locus_tag="VGA78_05275"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX9893311.1"
                     /translation="LNAGEIPGKWGTAHVNIVPYQAFRMQDGSMIIGAANDRLWVKLC
                     EAIGLPEVGRDPRYATNAQRVAHRDEIVRRLEARLATKTRKEWETILAPTGIPCGPIN
                     RMDEVFADPQVQHLEIVLEAEHPTAGTIRMVRNPVSFSLTPVDLRQVPPRLGEHTEEV
                     LHGLLGYSAAEVEALRAAGVV"
BASE COUNT          326 a          767 c          690 g          345 t
ORIGIN      
        1 ccaggaccat gtgcaccccg gcgggatacc ggatcggctc ctcgtaggtc gcggtgtccc
       61 ggatgtgatc cggatcgaag aggacgatgt cggccgcgtt ccccggacgg atccagccgc
      121 gatccgcgag gcccatccgc cggcagggat cggaggtcat cttgcggatg gcggtggaga
      181 gatcgaagag ccgcgcgtcg cgggagtaat gccccaggac ccgggcaaag ctgccgaagg
      241 tccgaggatg cgggcgcccc gtggacagcg gaccgtagtg ggcacggcag cccgagtcgg
      301 agccgatcat cacgtagggc ttccgcagga tcgcctgcag attctcctcg ctcatcgtga
      361 aatagatggc atccacctgg gtctgctctt cctgcagcag gtccaggacg aaggtcaacg
      421 tctccttccc ggcgacccgc gcggccgcat ccacccggag gccttggtac cgccggttct
      481 cgggctgggt gacctcggag atcatcacct ggctccagtc ccgggcattc ggtccctcgc
      541 cgatctcctg ccggatccgg gaccggacgg tcggatcccc gaggcgcgcc gtctgttccg
      601 ccttgctgcc ctccagggcc cagcgcggca atgccgcctg cagacctgtg ttggcggccg
      661 tgtaagggta ccggtcggcc gtgacgtcca ccccgcgccg ctgcgccgcc tcgatcagct
      721 cgaaggcctg ggtgagcttc ccccagttgc gctccccgta cgtcttgagg tgggagatct
      781 ggaggggggt ccgcgccgcc tcggccgccg cgatcacttc ccggatcgcc tccaggagtc
      841 catccccctc gctccgcatg tgggtcgcca ggaccccgcc cctgcgcccc gccacggccg
      901 tgagggtcgc cagctcctcc ggcggcgaga agcacgccgg agaatacacc agccccgtgg
      961 acagacccaa ggccccttcg cccatgcccc gctccagggc cgccaccatc gcctccatct
     1021 cggccgggct gggcgcgcga tccgcgcccc ccatggcgga tccgcgaagc gtattgtggc
     1081 cgatcaggag gccgaagttg atcgagatcc cgacatccaa gagtcgccgg aagtaggcgg
     1141 cgacatcgtg ccacccgtgg tccagcccat agacgtcgcg gtaggacttg gcgcgatcct
     1201 cccaccaggg tccccagatg ggggccgccg cgtacccgca gtttcccccg atctcggagg
     1261 tcaccccctg cagcacggcg ctctcggccg tgggggtaag gagcaggtgg taatccgaat
     1321 ggccgtggat atccacaaag cccgggcaga cggccagtcc gcgcgcgtcg atgacccggt
     1381 gcgcctcccg gggcgagaca tcgcggccca cgctgataat tcgatcgcct tgaatggcga
     1441 tgtcgatttc caccggcggg ccgcccccgc cgtcgaacac gcgcccgcct cggatgaaga
     1501 tgtcaacggt catgcccaat accgcctctc agttccgatg aatctgcgta atctgcggat
     1561 cctccatttc cggctccgag atcataccac gccggccgca cggagcgcct ctacctcggc
     1621 cgcggagtag cccaggagac catggagcac ctcttcggtg tgctcgccca atcgcggggg
     1681 gacctgccgc agatccacgg gcgtcagcga aaagctcacg gggttccgca ccatgcggat
     1741 ggtcccggcc gtcgggtgct ccgcctccag cactatctcc aagtgctgca cctgcggatc
     1801 ggcgaacacc tcatccatcc ggttgatggg tccgcagggg atgccggtgg gggccaggat
     1861 ggtctcccac tccttgcggg tcttggtcgc cagccgggcc tccagccgcc gaacgatctc
     1921 gtcgcggtgc gccacgcgct gcgcgttggt ggcatacctc gggtcgcggc cgacctcggg
     1981 caggccgatc gcctcgcaga gcttcaccca caatcggtcg ttggccgccc cgatgatcat
     2041 ggagccatcc tgcatccgga acgcctggta gggcacgatg ttcacgtggg ccgtgcccca
     2101 cttccccggg atctccccgg cgttgagg
//
LOCUS       DASWKS010000182         3059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_80834, whole genome shotgun sequence.
ACCESSION   DASWKS010000182 DASWKS010000000
VERSION     DASWKS010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80834"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /gene="rpe"
                     /locus_tag="VGA78_05280"
     CDS             complement(<1..644)
                     /gene="rpe"
                     /locus_tag="VGA78_05280"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX9893312.1"
                     /translation="MSVRIAPSVLSADLSRLSEQIGSALAGGAEWMHVDVMDGRFVPN
                     LTFGEPLIRALRRVTDRPLDVHLMVQEPEHYISRYAAAGVAVFTIHPEATIHLQRQLA
                     AIREAGMKAGLALNPGTPVAVLEEVVDDVDLVLVMSVNPGFGGQRYLPAATDKIRRVR
                     QLLDRQGSRAMLEVDGGITLETIAEAWRAGADTFVAGTAVFGEADPAEAVRALKG"
     gene            complement(641..1381)
                     /locus_tag="VGA78_05285"
     CDS             complement(641..1381)
                     /locus_tag="VGA78_05285"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEX9893313.1"
                     /translation="MMLWLRSATTRRRLQVAGVLAAAALAGWLVSLLAYPAPLVEREK
                     RLPLVVGLSYENAQRELESQGFRVKVRDTREPDPALPAGDVTWQDPPGYLGVPEGSVV
                     ELTLSAGPAPTTVPDVMFFDLEEARKVIAAAGLTVGGIDSVPADVDRGVVVSTRPPQG
                     TTRPPGDRVDVVVSRGPAAVVVPDVVGLPEVAAREQIEDAGLRIGLVRIQRGGRAGPS
                     TVLSQRPNAGSLLPRGGRMDLVVSERPR"
     gene            complement(1378..2649)
                     /locus_tag="VGA78_05290"
     CDS             complement(1378..2649)
                     /locus_tag="VGA78_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX9893314.1"
                     /translation="MSTGLAPRRAAWRLLELVGSGRPFDLALTETFRNLSEADRRLAH
                     ELAAGTLRSAGVLDSAIAPYVRGGWERVPNSIRNVLRLGAYQLTALDRVPPHAAVATT
                     VSLAREVAGARTAAFANAVMRRVAETAPRVVPGRASHPGWLVSRWTARYGPEEAARLQ
                     AWNDTRPRLIVQPARWDLGQLEAAWRQAGVEFSDAPFGAGLIPEAITRPRLLPGYEEG
                     GFIVQEAAQALVVRYFDLPANAVVYDAAAAPGGKTIAMGRAAALVVAADIRRDRVVRL
                     RENLARAGSGREHPLLADATAAPVRPVDVVVFDAPCLGTGVMARHPEARWRVSMEGLS
                     RLAEQARVMLHALAQSVRPGGLLCFSTCSLEPEENEEQIEAFLRADPRYRREPSSSVP
                     AALLTAAGDLALVPQHHQTDGGFAARLRRVG"
     gene            complement(2646..>3059)
                     /locus_tag="VGA78_05295"
     CDS             complement(2646..>3059)
                     /locus_tag="VGA78_05295"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEX9893315.1"
                     /translation="AVLAKEGFAVLAYTNDDLISALRLEDAGAAAVMPLASPIGSGLG
                     LLNPFTIRTIKHRLSLPVIVDAGVGTASDACVTLEQGVDGILMNTALAEAQDPLRMAV
                     AMRHAVEAGRLAYLAGRMPRREVAVPSSPMAGMLA"
BASE COUNT          480 a         1114 c         1047 g          418 t
ORIGIN      
        1 cctttgaggg cgcggacggc ttcggccgga tcggcctcac cgaagacggc cgttccggcc
       61 acaaacgtat cggctccggc ccgccacgct tccgcaatgg tttccagcgt gatcccgccg
      121 tccacctcca gcatcgcgcg ggatccctgg cggtccagca gctggcggac ccggcgaatc
      181 ttgtccgtgg cggccggcag atagcgttgt ccaccgaagc ccggattgac ggacatgacc
      241 agcaccaggt cgacgtcgtc caccacctct tccaacaccg caaccggggt gccgggattc
      301 aacgccaggc cggccttcat gccggcttca cgaattgccg ccagctggcg ctggaggtgg
      361 atggtggcct cggggtggat ggtgaaaacc gccacccccg cggccgcata ccgtgaaatg
      421 tagtgctcgg gctcctgaac catcaggtgg acgtccaagg gccggtcagt gacccgccgg
      481 agggcccgaa tcagcggctc gccgaaggtg aggttgggca cgaatcggcc gtccatgacg
      541 tccacgtgca tccattcggc cccgccggcc aaggcgctgc cgatctgctc gctcagacgg
      601 gagagatcgg cgctcaggac gctgggcgca atgcgaacgc tcatcggggc ctctcgctga
      661 ccaccaggtc catacggcca ccccggggaa gcagcgaccc ggcgttgggt cgctgactca
      721 gcaccgtcga cggtccggcg cgcccgccgc gctggatccg aaccaatccg attctcaagc
      781 ccgcgtcctc gatctgttcc cgggcagcca cctccggcag ccctaccaca tccggcacca
      841 ccaccgcggc gggaccgcga ctgaccacta cgtccacccg gtcgccgggg ggccgggtag
      901 tgccttgggg cggtcgggtc gataccacca ctccccgatc gacatccgca gggactgaat
      961 cgatgccgcc caccgtcagt ccagcggcgg cgatcacttt ccgggcctct tccaggtcga
     1021 agaacatcac gtccgggacc gtggttggcg ccggtccggc gctcagcgta agctccacca
     1081 cgctgccctc ggggactccc aggtagccgg gcgggtcctg ccaggtgacg tctcccgccg
     1141 gcagagcggg atcgggctcg cgggtgtcgc ggaccttcac ccggaaacct tgagactcga
     1201 gctcccgttg cgcgttttca taggagagtc ccaccaccaa cggcagccgc ttctcgcgtt
     1261 cgaccagggg tgcgggatag gccagcagcg acaccagcca tcccgccagg gccgcggccg
     1321 ccagtacgcc cgccacctgg aggcgccgcc gggtggtggc gctccgcaac cagagcatca
     1381 tcctacccgc cgcaaccggg cggcgaatcc gccatcggtc tggtgatgtt ggggcacgag
     1441 ggcgaggtca cccgccgcgg tcagcagcgc cgcggggacc gaggacgacg gctcccggcg
     1501 gtagcgcgga tcggcgcgga gaaacgcctc gatttgctcc tcgttctctt ccggttccag
     1561 cgagcaggtc gagaaacata gcaagccacc cgggcgcacc gattgagcca gcgcgtgcag
     1621 catgacccgg gcctgctccg ccaggcgcga caatccctcc atgctcaccc gccaacgcgc
     1681 ctccgggtgg cgcgccatca ccccggtgcc caggcagggg gcatcgaaca ccaccacgtc
     1741 caccgggcga accggcgccg cggtcgcatc ggccagcagc gggtgttccc ggccgctgcc
     1801 ggcccgcgcg agattctccc gcagtcgaac gacacgatcg cgccggatgt cggcggcgac
     1861 gaccagggcc gcggcccgcc ccatggcgat ggtcttgccg cccggagccg cggccgcatc
     1921 gtagaccacg gcgttcgccg gaaggtcgaa ataccggacc accaatgcct gggccgcttc
     1981 ctgcacgatg aagccgcctt cctcgtaccc cggcaacagg cgcgggcggg tgatggcctc
     2041 cggaatgagg ccggcgccga atggggcgtc gctgaactcg acgccggcct ggcgccaggc
     2101 tgcctcgagc tgtcccaggt cccaccgggc cggctgaacg atcaggcggg gccgggtgtc
     2161 gttccaggcc tgtagccggg cggcctcttc gggaccgtaa cgggcggtcc atcggctgac
     2221 cagccacccg gggtgagagg cccgccccgg cactacccgc ggggcggtct cggccactcg
     2281 gcgcatgacc gcgttggcaa aggccgcggt gcgagcgccg gccacctcgc gcgccaggga
     2341 gacggtggtc gccaccgcgg cgtggggcgg gacccggtcc agcgcggtca actgataggc
     2401 gccgagccgc aggacattac ggatggaatt gggaacccgc tcccagccgc cccgaacgta
     2461 cggcgcaatg gcgctgtcca gcaccccggc gctgcgaaga gtgccggcgg ccagctcgtg
     2521 ggctagacgg cggtccgctt ccgacagatt gcggaaggtt tcggtgagcg cgagatcgaa
     2581 gggccggccg ctccccacca gctccagcag gcgccacgcc gctcgccgcg gcgcgaggcc
     2641 ggtgctcagg cgagcatccc cgccatcggg ctcgagggga cggcgacttc ccggcggggc
     2701 atgcggcccg ccaggtaggc caggcgcccc gcttcgaccg cgtggcgcat ggccacagcc
     2761 atccgaagcg ggtcctgcgc ttccgccagc gcggtgttca tgaggatgcc gtcgaccccc
     2821 tgttccaggg tgacgcaggc gtcggaggcg gtgcccaccc cggcgtcgac gatcaccgga
     2881 agcgagagcc ggtgcttgat ggtgcggatg gtgaagggat tgagcagtcc cagtccactc
     2941 ccgatgggcg acgcgagcgg catgaccgcc gcggcgccgg catcctccag ccggagcgcg
     3001 ctgatgaggt catcgttggt gtaggccagg accgcgaaac cctccttggc caggaccgc
//
LOCUS       DASWKS010000183        22310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_820775, whole genome shotgun sequence.
ACCESSION   DASWKS010000183 DASWKS010000000
VERSION     DASWKS010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 22310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820775"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VGA78_05300"
     CDS             <1..314
                     /locus_tag="VGA78_05300"
                     /inference="COORDINATES: protein motif:HMM:NF012779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HEX9893316.1"
                     /translation="LLLPPEHAGSRRPRRTASGRRAAAPPSADPAAAALFEALRARRL
                     ELARSERVPPYVVASDRTLRELAELKPESLAELEGIYGIGPAKVARYGKALLAVLRSG
                     R"
     gene            complement(387..527)
                     /locus_tag="VGA78_05305"
     CDS             complement(387..527)
                     /locus_tag="VGA78_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893317.1"
                     /translation="MKQPTQKRSAKRRTIREEDAKNATRMKGRTDRKQEFRKIGRRPA
                     GY"
     gene            complement(543..9041)
                     /locus_tag="VGA78_05310"
     CDS             complement(543..9041)
                     /locus_tag="VGA78_05310"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HEX9893318.1"
                     /translation="MTGRPPEVFAARELGAALARRHGAVRQGGPSRPLRNRLSHLEQY
                     FHTVDERLTRAEAPRAPAGAEWLIDNAHVITEALRQVEQHLPPAFYRELPKLEDPRAV
                     RQARVHAIAVEAMLESGGLLDAGRVEDFLSGYQDMTPLTMGELWAFPSMLRLALLEEL
                     AVASAAVSGIAPPGPVPTPESPAGAEQTLATCVKSLRWIAVQDWKLFFEAVSPVHRTL
                     LQDPAGVYPRMDFETRNTYRRSVEQMARWAGVSEQHVTDAAIARCQRVPGEPRASHVG
                     FPLIDAGRLDLERELGCLLPLEERIARTTRRFALPLYLAGLVGLTLGLAVLVAAFAGG
                     LSAAGILVTLLPASGVAIAFVNRMATQLRLPRRLPRLDPASGVPPGDRSVVVVPTLLQ
                     TREDLEEVLGGMERNFHGNEVPGLNFVLLTDFRDAAAREEPGDTDLLARAAAGITDLN
                     ARLAGKRPVFHLVHRGRQWNPAERCWMGWERKRGKLVEFNRLVLGAGDTTLRVEVGSL
                     EQLQQARFAITLDADTVLPHGTAARLIATLAHPLNRPELDPSGRVTAGYSVLQPRVAT
                     TPASATQSRFAEAFQGDNGLDLYDRVVSDVYQDLFDQGVFAGKGIYEIAAFERTVRGR
                     VPPNALLSHDLFEGILGRTGYVSDVVLLEDLPAHPVGYFRRLHRWVRGDWQLLPWLGS
                     RVPSEDGTPQATSIGALGRWMMLDNLRRSLLPPAFLLLLLLGWTLLPGAAWRWTLAGI
                     GLLAMPVLFEVGSAGLTLATTRSWRRTVDGLMAGWRAAGRWLIDVVFLAHQTLVVADA
                     IARTLWRLAVTRRHLLEWTTFAHTARALTSGAGTTRAMAGSAALALVAAGLVLLLRPP
                     ALPVAAPLLLAWLAAPGIAIALSRPRPERIERLDSRERRRLRALARRTWHFFERFLGP
                     AERWLVPDNFQEAPGGIVARRTSPTNLGMSLGSVLAAYDLGFVGVLELSASLRSILEA
                     MDRLERYRGHFLNWYDTRNDRPLEPRYVSTVDSGNLAGALLAVRQGCRQAEHDPVILP
                     ALRDGLHDTVVVLREILHAVPPEAAAGLEPIRESLHLLSVRLVETRHDVESYDRLFRW
                     IREEWSPALSHRASSIVLAPEERWSQISREDLFLWIELLQEDLGVAERLVHRLAPWGA
                     LLTERPRFESGDPEVKRLWSGLIGDLARVPPLDEIEALAARVDQQCGRLESILAGGKG
                     PANAGGVGSWFERLREVLGQATTYAADVRDDLNQIANAAEDLFRGMDFSFLFDDFRRL
                     FRLGYSVTSDRYDPGHYDLLASEARFASLVAIAKGDVPATHWIKLQRPLARVHGDLVL
                     LSWGGTMFEFLMPPLFTFTPPRTLLYQAVQGAIRRQVAFGAGHGTPWGVSESGFAGLD
                     PGGNYRYRAFGVPGLGMRRDTGDRLVISPYASALALPFAPETALFNLDRIAAGGGLGR
                     HGFYEALDYGTAPRADGSPILVRSYMAHHQGMALLAMDNALNEHAIARRVHADLRIAS
                     IEPLLQERSANQPTFELPAPATARVPLPAKAPPITRWSVDPADPIPTIHVLSNGRYHV
                     LATGAGGGGSRWQGLGLTRWRADPGADAWGPWIYLQDQETGQVWSATAQPATAPIESY
                     TTHFEAGAIEYHCRHEGLSVRTRVVVPVEDDVEIRIVTLSSTDGRARRLAVTSYGEVV
                     LAPPDADRRHQAFAKLFVESSALPGLETLLFRRRPHAAGEDPVYLAHRLVRGPGCDGS
                     VSWETDRARFLGRSGRPASPAALEPGAGALSGTTGDVMDPVYALRSEVSLARGGKVEL
                     AFITAAGRSRGAVLDRLAAYRSFSRLEWAAGRTSLEVEHRIREAGGIAAELPQQSALL
                     SALITPYHALRAAPEVQAATRWSQPSLWRFGISGDFPIVLAFVAGEQLSLVSELLRAH
                     AHWRMHGTRVDLVLVDEVASGYEQPVREAIDKALEATGSSSWLGRHGGVFVLDGPAIT
                     DERHILASAARVVLDANRVLATHLERLRDRSPALPRFEPFPGPGPDDEPTPPLAPATG
                     LLFDNGLGGFTPDGREYIIRLAPGVRPPAPWSNVCANAEFGCVVTDTGLDMTWAANSS
                     ENRLTPWRNDPVNPPPAEVLYLRDEESGDVWSATPEPAGQGVAFEVRHGHGYSEFRHA
                     RRGLHHRLRVLVHPDHPVKLIELTLSNTWRRPRRITLTHYAEWVFGSARDVTAPFLVT
                     EYDDGLGALLARSPIGVGATGSFAAVGASERPHGFTCDRQEFLGNRERWLQPAGLVRI
                     GLSGFTGTGRDPCAALQLHLDIPPGESRTVHFVLCYAGSRAEALELVRRWSNANAVTE
                     AMDSLAAVWDAVCGCLTIETPDPALDTLVRWLPYQVLSARVWGRTGLYQSSGGYGFRD
                     QLQDVMALVLARPDVARDHLLRAASQQFREGDVLHWWHPGNGAGVRTRCSDDMAWLPF
                     VVAYYVETTGDDAVLGLEAPFLDAPQLERGELQRYNTWRLSSETGTLYEHCRRALDRA
                     FTAGPHGLPLIGTGDWNDGFDRVGREGRGESIWLGWFLCAVAADFGRIARRWGRPDDG
                     ERWAERAERVRQAIEQHGWDGAWYRRAYHDDGSVLGSRQAEACQIDSVAQTWSVLSGV
                     AEPARAELAMQSVLERLVKWDDRLVLLLTPPFDAPRSDPGYVSSYPPGVRENGAQYTH
                     AAAWVVWAFTALNQPDVVARLLAALNPINHTGTPEGIARYRGEPYVVAGDVGAEPPHV
                     GRAGWTWYTGSAAWIYRSVVEGLLGIRRLGDSLVLDPCLPAGWPEVRVTYRYGSSRYH
                     IRIENRNGGGRGVRSVVLDGAVLTEARLPLVDDGAEHQVEVESRGGVLEEAGGSSPLR
                     GNEG"
     gene            complement(9038..10006)
                     /locus_tag="VGA78_05315"
     CDS             complement(9038..10006)
                     /locus_tag="VGA78_05315"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9893319.1"
                     /translation="MLRNILVPLDGSSRAEVAVSHAAALAGFSEAVVVLLRVVEEDPG
                     QGVAVDPVHFRFAQQRASEYLRRIATGLTAKGTRTRWEVRVGKPADQIVDFASSHGID
                     LIVLSSHGRGDATAFGLGGTAHKVVEGAGVSVMLIPSAEHLSGAPAAVAYRRIVVPVD
                     RSPRSDWAVSFGAGIARASEGELVLVHVIPTPDSEGLAPSGSDEQQLAETLIQLARTR
                     AEYSLREVIHQLTESGLAARYRMVESAHSAASIADIAREERADLTLLVAHGSAGETRL
                     PYGSVCAKLLAMGTGVTLVLQDQPSPSRALEPIESSPRPRGLAARP"
     gene            10192..12177
                     /locus_tag="VGA78_05320"
     CDS             10192..12177
                     /locus_tag="VGA78_05320"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX9893320.1"
                     /translation="MSRHLALLREEMVTRQLEARGINDQRVLAAMRGVPREEFVPHEL
                     VEFAYQDSPLPIDEQQTISQPYIVAWMMQALELGPRSRVLEVGTGSGYAAAVLAVLAG
                     EVYTVERHQSLALAAEGRLRRLGYRNVQVRTGDGSLGWPEHAPYDAIVVAAGGPDIPA
                     ALKQQLAIGGRLVIPIGATQREQTLLRLRRTAQNDFLREDLGSVRFVPLIGAEGWGDP
                     ARPKPAPARPAGVTDLVARAAEPFTDLNSANLDRLIERAGHATVILLGEATHGTAEFY
                     RMRARITQQLIQRAGVTIVAVEADWPDARRIDRYVRDGVPDPHAEEAFTRFPTWMWAN
                     RQVLDFADWLRSWNAGQPDLERRTGFYGLDLYSLYTSLRSVVAYLGEVDPEAAAAARA
                     RYGCLSPWEGSPAAYGAAVLRGDFEGCEHQTLTILDDLLRRRLDYASRDGERFFEAER
                     NAQLVANAERYYRAMYYGSRESWNLRDRHMFDTLAALLEHRGPGARAVVWAHNSHLGD
                     ARATEMGARGELNLGELCRTRFGEDAYLVGFGTDHGTVAAAHDWDGAMEVMQVRPSHP
                     KSYERVCHDTALPAFLLPLRTAPSRAAREALMSERLERAIGVIYRPRTEVQSHYFYAS
                     LPQQFDEWIWFDETRAVDPLPVPAAGEGLPETWPFGV"
     gene            12282..12620
                     /locus_tag="VGA78_05325"
     CDS             12282..12620
                     /locus_tag="VGA78_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893321.1"
                     /translation="MSKRPPRNQVVGARFWESVTKEHEATRAEIRFFGVVKRVPVGAF
                     PRKHSDFRAMALEWDESPEALRQDLPPSLPVSMQGWEPLPGATVERYEAFDRETGDLL
                     IFWRVPCRRK"
     gene            12659..13567
                     /locus_tag="VGA78_05330"
     CDS             12659..13567
                     /locus_tag="VGA78_05330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893322.1"
                     /translation="MAPAPAQTLGTILGEYALPARGLAAGDLDHPITGYAVENAGDLF
                     VIAFVFADTSGVSFPDTLRLSSFDRVAGVWTHAAIERRRLGEPGRDIGSVVAIHPTAR
                     HVFLDTHGNPSAGTLLVFTRDLAPVAALDGWLLRLLPGGLAVYHQSMIHFAPTHSAEL
                     RLYDADSGRDVTLYPREPDGPVRRRYVAATRQQYARVGADWFRNNNHPMDPRRFTSAL
                     RDSLVTNAAGTALAFLMRFGNEAATPVATPLLDVVVHCRQVRSTQPQCSETELATLQR
                     RHPRWDTSRILHSLLGRDPAALRGPP"
     gene            13657..13989
                     /locus_tag="VGA78_05335"
     CDS             13657..13989
                     /locus_tag="VGA78_05335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX9893323.1"
                     /translation="MTPPTPGPVSSSDRRSHTRVTFTPFQRPTFLLPMGRHDVLDASL
                     SGLRILHTSLVRPQVGSRISGTLQWIHGEPPLQLSGTIVRVGRNDFAMTCDPGTIPLG
                     YLPWATSR"
     gene            14009..15031
                     /locus_tag="VGA78_05340"
     CDS             14009..15031
                     /locus_tag="VGA78_05340"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893324.1"
                     /translation="MRIRLLTAVLLAAADCSAPAPPSAPPPVEPDRVRSLVFTLAADS
                     MEGRRTGTRGIERAARFLAGEMQRLGLAPAGDSGFYQRVPLSRAATGRLMVAPSMEAL
                     DTVPAERRTAAWNIIGVVEGGELRGEVVLVSGHYDHVGMRRIDSATSDTVFNGADDNA
                     SGTVALLEVARLIHLGPVPRRSVVFVAFTGEELGGLGTQRYLTAPVRPLEKTVANFNI
                     EMIGRPDSLAGGAGRAWLTGYERSNMGDQLKAGGIPIVPDPRPDQNFFRRSDNYPFAL
                     RGIPAHTLSTFNLHADYHRPSDEPDRLDYQHMAQVIDAAVKAVRILADGPRPEWKPGG
                     RPEPNR"
     gene            complement(15051..15188)
                     /locus_tag="VGA78_05345"
     CDS             complement(15051..15188)
                     /locus_tag="VGA78_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893325.1"
                     /translation="MSWRVSQGHLDDELWPTDQDLGHTHAAVTLEIDTYLPLLVQRPT
                     H"
     gene            complement(15408..16748)
                     /locus_tag="VGA78_05350"
     CDS             complement(15408..16748)
                     /locus_tag="VGA78_05350"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9893326.1"
                     /translation="MRNGSWVTAVALVGAALGCRVLEQVPGRLFDHRTPRERYEASLQ
                     GAGLAGTALVRDWTTAAERALREAPAVKAPHVEEAYLPPAEPAALALRVKARRGQRIR
                     FETELPGDSVTLVFLEAWEVGTDSAATFRQVATADSGERAISFEPRQDGEFVFRVQPE
                     LLRGGRLRMSLQVGPILTFPILNGRDRDVGSRFGAPRDGGARDHHGIDIFAPRGTVAV
                     AAAEANVVRVETTARGGRVVWLRDRRGNALYYAHLDRQHVSQGDQVTPGDTIGWVGNT
                     GNAVTSPPHLHFGVYRRGEGPVDPWWFVHRPPGEQPPLAADTTMLGAWTRTPKDRIAL
                     RDRPDGRATQLGSMPRHTAMRVLAAVGDWYRVRLPDRTTGYVIARSIEPALDAVETAT
                     LKRGNAVLSQPGDTSRPAEIIAEMAAGDSVAVLGRFGDYLLVRTPAGRAGWVGK"
     gene            16909..17679
                     /locus_tag="VGA78_05355"
     CDS             16909..17679
                     /locus_tag="VGA78_05355"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX9893327.1"
                     /translation="MTASSRPFVLAEATWTSVREAPFEVAVLPWGATEAHNRHLPYAT
                     DTIQSEAVAIEAARRASEAGARVVVLPSIPFGVNTGQREIPLCLNLNPSTQTALLRDL
                     LRSLAPHGVHKLVILNGHGGNDFRQIIRELQPETELLLCQLNWYACVDPRPFFSLPGD
                     HAGELETSMMLHLAPRLVRPLSEAGPGRARQFRVQAFREGWAWTPRKWIEVTDDTGVG
                     DPSAAAESKGARFFEAVVERVAGFLRELDGVNPEALYQ"
     gene            17787..18614
                     /locus_tag="VGA78_05360"
     CDS             17787..18614
                     /locus_tag="VGA78_05360"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HEX9893328.1"
                     /translation="MITGATGKQGGAVARALAGKGFRLRAMTRKPESTAAQALQQSGV
                     TVVRGDLDDAESLRHALDDAWGVFAVQNYREAGVQKEEEQGKRLAALAHQAGVQHYVY
                     SSVASAHRKTGIPHFDNKWRVEEVVRELGFPSHVILRPVFFMENLFLPMFLNGGKLTA
                     ALDPATVLQMIAVEDIGKYGARAFTDASRLSRREIDLAGDAATMPEAAATLGQGLGRQ
                     IEFVRIPIEEIRQHSDDTALMLEWFDRVGFNVDIQRLEQEFGISSIKLKDWAARQRS"
     gene            18690..20435
                     /gene="ybaL"
                     /locus_tag="VGA78_05365"
     CDS             18690..20435
                     /gene="ybaL"
                     /locus_tag="VGA78_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaL family putative K(+) efflux transporter"
                     /protein_id="HEX9893329.1"
                     /translation="MPHNVALIATIAAGLGLALVMGFITTRLGLPGLVGYLLAGILIG
                     PFTPGFIADISLSQQLAEIGVMLLMFGVGMHFSLEDLLSVRGIALPGAIAQIIVATLL
                     GIAVSSLWGWSLGTGLVFGLALSVASTVVLLRALEDRGVLDSVNGRIAVGWLVVEDLV
                     MVLALVLLPPLAASLGGTGPAEAAARSLPLTVGLTLAKISAFIAVMLIAGRRAFPWLL
                     AQVARTGSRELFTLCVIAVALGTAYASAALFGVSFALGAFFAGVVVGGSDLSQRAAQE
                     SLPLRDAFAVLFFVSVGMLFDPATLIRQPLQVLAVVAIIMVGKSLAAFGLVLAFRYPL
                     NTALTVSASLAQIGEFSFILAGLGVSLGLLPTEARSLILAGALLTISLNPVVFRLIEP
                     AQAWIRSRSNLARALERSDDPLAELPQSVDLHRLTGHVVLVGYGRVGRRIGRALVDAD
                     VPFVVAEQNREVVEALRQDGLAAVSGDAAEPAVLIQAHIARAGMLVVAVPDAFAAGRM
                     IETARRLNPTIDSVVRTHTEADRVLLESARVGRVFMGEHELAMGMTRHILERIAAGVL
                     GVGKRGERSGLPQLQ"
     gene            complement(20439..20828)
                     /locus_tag="VGA78_05370"
     CDS             complement(20439..20828)
                     /locus_tag="VGA78_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893330.1"
                     /translation="MSRLRFPALAIVLFAVACSSGGDSSYGPNPPPPPPPAPPPPPPA
                     PGTVDIRDNFFTPTPITVTAGTTVTWNWRGGLEHTLTFEDNVGSSPGKTTGSVDRTFG
                     TAGTFRYRCTNHSTSFTSGMIGSVVAQ"
     gene            20883..21578
                     /locus_tag="VGA78_05375"
     CDS             20883..21578
                     /locus_tag="VGA78_05375"
                     /inference="COORDINATES: protein motif:HMM:NF004836.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893331.1"
                     /translation="MPRIALVGDYSPAVTAHRAIPLALERAVRASGRAVTWDWIGTAS
                     LEGDISARLSGYAGVWLVPASPYANTRGALAAIRFARTSHRPYLGTCAGFQHALLEYA
                     ESEWGVEPAAHAELEPAASDPVIALLSCSMVEVKGTIQLLPGTRLAALYGTLEATEGY
                     HCNYGLNPTWASRLENGPLRVAARDQAGEVRAIELEDHPFFFATLYQPERSALADADH
                     PLIRAYVTAVATV"
     gene            complement(21927..>22310)
                     /locus_tag="VGA78_05380"
     CDS             complement(21927..>22310)
                     /locus_tag="VGA78_05380"
                     /inference="COORDINATES: protein motif:HMM:NF022963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3224 domain-containing protein"
                     /protein_id="HEX9893332.1"
                     /translation="TATFELTGWNEKPLDEGEVLPKMTRASVSKKFQGDVEGESKVEY
                     LMMYRDDGTATYVGLERITGQLAGKRGSFVLLHEGVFEDGVSKTTWTVVPGSGTGELA
                     GLKGKGGFASGHAERYPITLEYELA"
BASE COUNT         3480 a         7915 c         7425 g         3490 t
ORIGIN      
        1 ggctcctgct ccctccggag cacgccggtt cccggcggcc tcgccgcacg gcgagcgggc
       61 ggcgggcggc ggctcctccc tcggcggatc cggccgccgc ggccctcttc gaggcgctcc
      121 gggcgcgccg gctcgagctg gcccgctcgg agcgggttcc gccctatgtg gtggcgagcg
      181 accgaacctt gcgggagctg gccgagctca aaccggagtc gttggcggag ctggagggga
      241 tctacggcat cggcccggcg aaagtggcgc gatacgggaa ggcactcctc gctgtgctgc
      301 gaagcggccg atagagccgc ccctgctccc tgctccctgc tccctgcttc ctgcttcctg
      361 ctccctgctc cccgctccct gctggtttag taccccgccg gcctccgccc gatcttccgg
      421 aactcctgct tccggtcggt ccgccctttc atccgggtcg cattcttggc gtcttcttcg
      481 cggatagtac gacgtttggc gctgcgcttc tgggtcggct gcttcatggt gccttcctcc
      541 ggttaacctt catttcctct caggggagac gaacctcccg cctcctccag gacgccaccc
      601 cgcgattcca cttccacctg atgttcggcg ccgtcgtcca ccagcggcag tcgcgcctcg
      661 gtcaggaccg ccccgtcgag taccaccgac cggactccgc ggccgccgcc gttccgattc
      721 tcgatcctga tgtggtaccg gctcgacccg tagcggtacg tcacccggac ctccggccag
      781 cctgccggca ggcagggatc gaggaccagg ctgtcgccca gccgccggat gcctaacagc
      841 ccttcgacca ccgatcggta gatccacgcc gccgatccgg tgtaccaggt ccagcccgcc
      901 cgcccgacgt ggggcggctc ggccccgacg tcgcccgcca cgacgtaggg ctctccccgg
      961 taccgcgcga ttccttccgg cgtgccggtg tggttgatcg ggttgagggc cgccagcaat
     1021 ctcgccacga catccggctg attgagcgcc gtgaaggccc acactaccca ggcggcggca
     1081 tgggtgtatt gggcgccgtt ctcgcgtaca cccggcggat aggagctgac gtatcctgga
     1141 tcgctcctgg gcgcgtcgaa cggcggggtg aggagcagca ccagccggtc atcccacttg
     1201 accagccgct ccagcaccga ttgcatcgcg agttccgccc gcgccggctc ggccacaccc
     1261 gacagcacgc tccaggtctg cgccaccgag tcgatctggc aggcttcggc ctggcgcgac
     1321 cccagcacgc tcccatcatc gtgataggcc cgccgatacc aggcgccgtc ccagccatgc
     1381 tgctcgatcg cttgtcgcac ccgttccgcc cgctctgccc atcgctcccc gtcgtccggt
     1441 cggccccaac ggcgggcgat ccggccgaag tccgccgcca ccgcgcacag gaaccagccc
     1501 agccagatgc tctcgccccg cccctcccgg cccactcgat cgaacccgtc gttccagtcg
     1561 ccggttccga tcagcgggag accatgcgga ccggccgtga aggcccggtc cagcgcccgc
     1621 cggcagtgct cgtacagagt cccggtttcg ctggagagcc tccaggtgtt gtagcgctgc
     1681 agctcgcccc gctccagctg gggggcgtcg aggaatggcg cctccaaccc gagcacggcg
     1741 tcgtccccgg tggtctcaac gtagtacgcc acgacgaacg gaagccaggc catatcgtcc
     1801 gagcagcggg tgcgaacccc ggcgccattc cccgggtgcc accagtgcag cacatcccct
     1861 tcgcgaaact gctgcgaggc ggcccggagc agatggtctc gcgccacgtc gggccgggcg
     1921 agcaccagcg ccatcacgtc ctgcagttga tcccggaacc catagccgcc gctcgactga
     1981 tagagcccgg ttcgccccca gacccgggcc gagagcacct ggtagggcag ccatcgtacc
     2041 agggtgtcga gcgccgggtc gggcgtctcg atcgtcaggc agccacagac tgcgtcccag
     2101 accgccgcca gcgagtccat cgcttcggtc acggcgttcg cgttgctcca gcgacgcacc
     2161 agctcgagcg cctcggctcg actgccggcg tagcagagca cgaagtgcac cgtgcgcgac
     2221 tcgcccggcg ggatatcgag atggagctgt aaggcggcgc agggatcccg gcccgtgccg
     2281 gtgaagccgc tcagcccgat ccgcaccaga ccggccggct gcagccagcg ctcccggttg
     2341 cccaggaact cctgccgatc gcaggtgaat ccatggggcc gctcactggc accgaccgct
     2401 gcgaacgacc cggtcgcccc aaccccgatt ggactccggg ccaggagcgc gccgagcccg
     2461 tcgtcgtatt ccgtaaccag gaacggtgcc gtcacgtccc gggccgaccc gaatacccat
     2521 tcggcgtaat gggtcagcgt gattcggcgg ggccgccgcc aggtgttgct caacgtgagc
     2581 tcgatcagct tcaccggatg atccggatgg accaggaccc gaagccggtg atgcaaaccc
     2641 cggcgcgcgt gccggaactc gctgtacccg tggccgtgcc gaacttcgaa ggccactccc
     2701 tgcccggccg gttccggtgt ggcgctccac acatccccgc tctcctcgtc gcgcagatag
     2761 agcacctcgg ccggcggcgg gttcaccggg tcgttgcgcc atggggtgag ccgattctcg
     2821 ctgctgttgg ccgcccaggt catgtccagg cccgtgtccg tcaccacaca tccgaactcg
     2881 gcattggcgc acacgttgct ccacggcgcc ggcggccgca cgcccggcgc gagtcggatg
     2941 atgtattcgc gtccatccgg cgtgaacccg cccagcccgt tgtcgaagag cagaccggtg
     3001 gccggggcca gcggcggggt cggttcgtcg tccggtccgg ggccggggaa gggctcgaag
     3061 cggggcagcg cgggagaccg atcgcgcagt cgttccaggt gggtggcgag tacccgattg
     3121 gcatccagca cgacccgggc ggcggacgcc agaatgtggc gctcgtcggt gatcgcggga
     3181 ccgtccagca caaagacccc accgtgacgg cccagccagc tgctgctgcc ggtcgcctcc
     3241 agcgccttgt cgatggcttc gcgcaccggc tgctcgtatc ccgaggcgac ctcgtcaacc
     3301 aggaccaagt cgactctggt gccgtgcatt cgccagtggg catgggctcg cagcagctca
     3361 ctgacgagcg acagctgctc gccggccaca aaggcgagga cgatggggaa gtcgcccgaa
     3421 atcccgaagc gccagagtga gggctgcgac catcgggtcg cggcctgcac ctcgggcgcc
     3481 gcccgcaagg cgtgataagg cgtgatgagc gccgagagca gcgcgctctg ctgcggcagc
     3541 tcggcggcaa tcccgcccgc ctcgcgtatc cgatgctcca cttccaggct ggtgcgcccc
     3601 gcggcccatt ccagacggga gaacgagcga taggcggcga gtcggtccag caccgctccc
     3661 cgggaccggc cggccgcggt gatgaacgcg agctcgactt tgccgccgcg ggccaggctc
     3721 acctccgagc gcagcgcgta caccggatcc atgacatcgc cggtggtacc gctgagggcc
     3781 cctgcccccg gttccaatgc cgcgggcgag gcgggccggc cgctccggcc gagaaatcgc
     3841 gcccgatcgg tctcccaact caccgatccg tcgcatcccg gtcctcgcac cagccgatgc
     3901 gcgaggtaga ccggatcctc gcccgcggca tgggggcgcc ggcggaacaa cagggtctca
     3961 agccccggca aggcgctact ctcaacgaag agtttggcga atgcctggtg gcgccggtcg
     4021 gcatccggcg gtgccaacac cacttcgccg tagctggtca ccgccagccg ccgggctctg
     4081 ccgtcggtgg agctcagcgt tacgatccgg atctcgacgt cgtcctcgac cgggaccacc
     4141 acccgggtgc gaaccgagag gccttcgtga cggcagtgat actcgatcgc cccggcttcg
     4201 aaatgggtcg tgtaggactc gatcggggcc gtcgccggtt gcgccgtggc cgaccagacc
     4261 tgcccggttt cctgatcctg gaggtagatc cacggtcccc aggcatccgc cccagggtcg
     4321 gcccgccagc gggtgagccc aaggccctgc cagcggctcc cgcctccgcc ggcgccggtc
     4381 gccagcacgt ggtagcggcc gttagagagc acgtgaatgg tcgggatcgg gtcggccgga
     4441 tccaccgacc accgggtgat cggtggagcc ttggcgggta gcgggactcg ggcagtggcc
     4501 ggagccggaa gctcgaaggt gggctgattc gcgctccgct cctgcagcag tggctcgatg
     4561 ctcgcaattc gcaggtcggc atggacccgt cgcgcaatgg cgtgctcgtt gagcgcgttg
     4621 tccatcgcga gcagcgccat gccttgatgg tgcgccatgt aggatcggac caggatcggc
     4681 gacccgtcgg ctcgaggcgc cgtcccatag tccagcgcct cgtagaaacc gtgacgtccc
     4741 agcccgccgc ccgccgcgat gcggtccagg ttgaacagcg ccgtctcggg cgcgaacggc
     4801 agcgccaggg ccgaggcgta cggtgagatc accagccggt cgcccgtatc gcgccgcatc
     4861 cccagaccgg gaaccccgaa cgcgcgatag cggtagttgc cgcccgggtc gagaccggcg
     4921 aagccggatt cggaaacgcc ccacggggtc ccgtggccgg cgccgaaggc cacctgacgc
     4981 cgaatggcgc cctgaaccgc ctgatacagc agcgtccggg gcggagtgaa cgtgaagagc
     5041 ggcggcatca ggaattcgaa catggtgccg ccccaggaga gcagcaccag atcaccatgg
     5101 acccgggcga gcggccgttg cagcttgatc cagtgggtgg cggggacgtc tcccttggcg
     5161 atcgcaacca gactggcgaa ccgcgcctcc gaggccagca ggtcataatg ccctggatcg
     5221 tagcggtctg aggtgacgct gtaccccagc cggaacaacc ggcggaagtc gtcgaacagg
     5281 aagctgaagt ccatcccacg gaacagatct tccgcggcgt tggcgatctg gttcagatcg
     5341 tcccgaacgt cggccgcgta ggtggttgcc tgtcctaaca cttcccgcaa gcgctcgaac
     5401 catgagccga ccccgcccgc gttggctggc cccttcccgc ccgcaagtat cgactcgagc
     5461 cggccgcact gctggtcgac ccgggcggcc agcgcctcga tctcatcgag cggcgggacc
     5521 cgggcgaggt cgccgatcaa tccggaccag agccgcttga cctccgggtc gcccgattcg
     5581 aaccggggcc gctcggtgag cagggcaccc cacggggcca gacggtgaac caatcgttcc
     5641 gcgacgccca ggtcttcctg cagcagctcg atccagagga acaagtcttc gcgggagatc
     5701 tgggaccagc gctcttccgg cgccagcacg atactcgagg cccggtgtga tagagccgga
     5761 gaccattctt cccgaatcca gcggaacaac cggtcgtagc tctcgacatc gtgacgggtt
     5821 tcaaccaggc ggacgctcag gagatggagg ctctcccgaa tcggctccag accggcggcg
     5881 gcctccgggg gcacggcgtg caggatctcc cggaggacca caaccgtgtc atgcaagcca
     5941 tcccgcaggg ccgggaggat caccggatcg tgctcggcct ggcgacagcc ctgtcgcacc
     6001 gccagcaggg cgccggccag gttcccgctg tcgacggtcg agacgtagcg gggttcgagc
     6061 ggccggtcgt ttcgggtatc gtaccagttc aggaaatggc cccggtatcg ctccagccgg
     6121 tccatcgcct cgaggatgct gcgaaggctc gcgctcagct ccagcacgcc gacgaacccg
     6181 aggtcgtacg cggccagcac cgacccgagc gacatgccga ggttggtggg cgacgtccgg
     6241 cgcgccacga tgccgcccgg tgcttcctgg aagttgtccg ggaccagcca gcgctcggcc
     6301 ggccccagaa accgctcgaa gaaatgccag gtccggcgcg ccagggcgcg gagccgtcgc
     6361 cgctcgcgcg agtcgagccg ttcgatccgt tcgggccgcg gcctcgagag cgcgatggcg
     6421 atgccgggcg ccgcgagcca ggcaagcagc aatggcgccg cgaccggcag ggccgggggc
     6481 cgcagcaata ggaccaggcc cgcggcaacc agagccaggg cggcggagcc ggccatggcc
     6541 cgcgtggttc ccgccccgct ggtgagggcc cgtgcggtat gggcgaaggt ggtccactcc
     6601 agcaggtgcc gccgggtcac ggccagccgc cagagagttc gcgcgatggc gtcggcgacg
     6661 acgagagtct ggtgcgccag gaacacgacg tcgatcagcc agcggccggc ggcacgccag
     6721 ccggccatca acccgtcgac cgtccggcgc cacgatcggg tagtcgccaa tgtgagcccc
     6781 gccgagccga cttcgaacag gaccggcatc gccagcaggc cgatcccggc gagggtccac
     6841 cgccacgccg caccgggcag cagggtccac cccagcaaca ggagcagcag gaacgcggga
     6901 ggcaggaggc tgcgtcgcag attgtccagc atcatccagc gtcccagagc accgatcgaa
     6961 gtggcttgcg gcgtgccgtc ctcgctcggt acccgggaac ctagccaggg caggagttgc
     7021 cagtcgcccc ggacccaacg gtgcagccgg cggaaatacc cgaccgggtg ggccggaagg
     7081 tcctccaaca agaccacgtc ggagacatag ccggtccgtc ccagaatgcc ctcgaacaga
     7141 tcgtgactca gcagcgcgtt aggggggacc cgtccccgca ccgtgcgctc gaacgcggcg
     7201 atctcgtaaa tccccttgcc ggcgaatacc ccctggtcga acagatcctg atacacgtcg
     7261 gacaccaccc gatcatacag atcgaggccg ttgtccccct gaaacgcctc ggcgaaacgc
     7321 gattgagtgg cgctcgcggg tgtggttgcc accctcggtt gcagcaccga gtagcccgcg
     7381 gtgacccggc cggatggatc gagctccgga cggttgagcg ggtgggctaa ggtcgcgatg
     7441 agccgggcgg cggtcccatg cggcagcacg gtatcggcgt cgagcgtaat ggcaaagcgg
     7501 gcctgctgca gctgctccag ggaaccgacc tcgacccgca gggtggtatc tccggcgccc
     7561 agcaccagcc ggttgaattc caccagcttg ccccgcttgc gctcccagcc catccaacag
     7621 cgctccgccg ggttccattg ccggccccgg tgcaccagat gaaacaccgg ccgtttcccg
     7681 gcgagccgcg cgttgagatc ggtgatgccg gcagccgccc gggccaggag atcagtatcg
     7741 cccggctcct cccgcgcggc ggcatccctg aaatcggtca ggaggacgaa attcaggccc
     7801 ggcacttcgt tcccgtggaa gtttcgctcc atacctccca ggacctcttc caggtcctcc
     7861 cgggtctgga gcagcgtagg aacaacgacc accgaccggt cgccaggcgg gacacccgat
     7921 gccgggtcga gccgcggcag ccgtcgcgga agccgcagct gcgtcgccat ccggttgacg
     7981 aacgcgatcg cgactccact ggcgggaagc agcgtgacga gaatgccggc tgcactcaga
     8041 ccgcccgcga aagccgccac cagaacggcg aggcccagag tcaatccgac cagaccggcg
     8101 aggtagagcg gaagcgcgaa gcggcgggtg gtgcgggcga tccgctcctc cagcgggagc
     8161 aggcatccca gctcccgttc caggtccagc cggcccgcgt cgatcaaggg gaagcccacg
     8221 tgcgatgccc gcggctcgcc cgggacccgc tggcagcgcg cgatcgcggc atccgtgaca
     8281 tgctgttcgg agaccccggc ccagcgggcc atctgctcca cgctgcggcg gtaggtgtta
     8341 cgggtctcga aatccattct cgggtagacg ccggccggat cctggagcag agtccgatgg
     8401 accggactca ccgcttcgaa aaacagcttc cagtcctgca ccgcgatcca acgcaggctc
     8461 ttgacgcagg ttgccagggt ctgctccgcg ccggccggcg actccggtgt gggcacgggc
     8521 cccggcggcg cgatcccgct gaccgcggcg gacgcgacgg ccagctcctc cagcagcgcc
     8581 aggcgcagca tcgacgggaa ggcccacagc tctcccatcg tgagtggggt catgtcctga
     8641 tatccggaga gaaagtcctc cacccgcccg gcgtccagca ggccgcccga ttcgagcatg
     8701 gcctcgaccg cgatggcgtg aacccgcgcc tgccgcaccg cccgggggtc ctccagcttg
     8761 gggagctccc ggtagaaggc cggcggcaga tgctgctcca cctgccgcag cgcttcagtg
     8821 atgacgtggg cgttgtcgat cagccattcg gctccggccg gggcccgggg agcctcggct
     8881 cgggtcaggc gttcgtcgac ggtgtggaag tactgctcga ggtgagacag ccggttccgg
     8941 aggggccggc tgggaccgcc ctggcgcacg gcaccgtggc gccgggccaa agcggcgccg
     9001 agttcccttg cggcgaaaac ctccgggggc cggccggtca cggcctcgcg gccagcccgc
     9061 gaggccgggg ggacgactcg atcggttcga gcgccctgct gggggaaggc tggtcttgca
     9121 gcacgagcgt tacgccggtc cccatggcca gcagcttggc gcacacactg ccatacggca
     9181 gccgggtctc gccggcggac ccgtgcgcca ccagcagcgt cagatcggcc cgctcctccc
     9241 gggcaatatc ggcgatgctc gcggcagaat gcgccgattc caccatgcgg taccgggccg
     9301 ccaggccgct ctcggtcagt tggtgaatga cctcacgcag actgtactcg gcccgggtcc
     9361 gagccagctg aatcagggtc tcggccagtt gctgctcgtc gctcccgctg ggcgccagac
     9421 cctccgagtc cggagtggga atgacgtgca ccagcacgag ctctccctcc gaagcccggg
     9481 cgatccccgc gccgaacgac accgcccagt cgcttcgggg ggaccgatcc accggaacga
     9541 cgattcgccg ataggcgacc gcggcggggg cccccgagag atgctcagcc gaggggatca
     9601 gcatgacgga caccccggcg ccttcgacca ccttatgggc agttccaccc agcccgaacg
     9661 ccgtcgcgtc accccggccg tgagacgaga gcacgatgag atcgatgccg tgcgaactag
     9721 cgaagtccac gatctggtcc gccggcttgc cgaccctgac ttcccatcgg gtccgggtgc
     9781 ctttggccgt caagccggtg gcgatgcgac gcagatactc tgaggcgcgc tgttgggcaa
     9841 aacgaaaatg caccgggtcg accgccaccc cctggcccgg gtcttcctct accactcgca
     9901 gaagtacaac caccgcctcc gagaagcccg ccagggccgc ggcgtgggat actgcgactt
     9961 cggcacgtga ggaaccgtcc agggggacca ggatgttacg cagcattcca tcccccgttg
    10021 aagagtagca ttgggagcac agcaaggcct gctccccagg cggggacgtc gccatcgacc
    10081 cccatcgaca caataccgga ttggtcggcc tgggtgcagc ccccctcggc tgtgtccccg
    10141 ccgtccgtcc cggccgtcca cgttagcagg aacgagcgaa ccgagcgatt catgtcgcgc
    10201 catctggctt tgctccggga agagatggtc acccgccagc ttgaggcgcg cgggatcaac
    10261 gatcagcggg tgctggccgc gatgcggggg gtgccccggg aagagttcgt cccgcatgag
    10321 ctggtggaat tcgcctacca ggattccccc ctcccgatcg acgaacagca gacgatctca
    10381 cagccctaca tcgtcgcctg gatgatgcag gccctggagc tcggcccccg gagccgggtg
    10441 ctcgaggtgg gcaccgggtc gggctatgcg gccgcggtgc tggccgtcct ggccggagag
    10501 gtctacaccg tcgagcgaca ccagagcctg gccctggccg cggaagggcg cctgaggcgt
    10561 ctcgggtacc gcaacgtcca ggtccgcacc ggcgacggca gtctcggctg gcccgagcac
    10621 gctccctatg atgccatcgt cgtggccgcc gggggtccgg acattcccgc ggcgctcaag
    10681 cagcagctgg cgatcggcgg ccggctggtg atccccatcg gtgcgaccca gcgggagcag
    10741 actttgctgc ggctccgccg gaccgctcag aacgacttcc tccgggagga tctgggcagc
    10801 gtccgcttcg tccccctgat cggcgccgaa ggctggggcg acccggctcg gccgaagccg
    10861 gcgccggccc gaccggcggg cgtgaccgat ctggtggcga gagccgcgga gccgttcacc
    10921 gacctgaaca gcgccaacct cgatcgcctg atcgagcggg ccgggcacgc caccgtcatc
    10981 ctgttaggcg aggcgaccca cggcaccgcc gagttctatc gcatgcgggc ccggatcacg
    11041 cagcaactga tccagcgggc cggggtcacc atcgtcgcgg tcgaggccga ttggccggat
    11101 gcccggcgga tcgatcgcta cgtgcgcgac ggcgtcccgg acccgcatgc cgaggaggcc
    11161 ttcacgcgct ttcccacctg gatgtgggcc aaccgccaag tccttgactt cgcggattgg
    11221 ctgcgcagct ggaacgccgg ccaacccgat ctcgagcggc ggaccgggtt ctacgggttg
    11281 gatctctaca gtctctacac ctcgctccga tcggtcgtcg cgtatctggg tgaagtggat
    11341 cccgaagcgg ccgcggccgc ccgggcccgt tatggctgtc tgtcgccctg ggaaggaagc
    11401 ccggctgcct acggtgccgc ggtgctccga ggcgatttcg agggctgtga acaccagacg
    11461 ctgaccatcc tggatgacct gctgcgcagg cggctcgact atgcgtcgcg cgacggcgag
    11521 cgtttcttcg aagcggagcg caacgcccag ctcgtcgcca acgcagagcg gtactaccgg
    11581 gcgatgtact acgggtccag ggagtcctgg aacctgcgcg atcgccacat gttcgacacc
    11641 ctcgccgcgc tgctcgagca tcggggtccc ggtgcccggg ccgtcgtgtg ggcccacaac
    11701 tcccatctgg gcgacgctcg cgcgaccgag atgggcgccc ggggcgagct caatctgggc
    11761 gagctctgcc gcacccggtt cggcgaagat gcgtatctgg tgggtttcgg caccgaccac
    11821 ggcaccgttg ccgcggcgca tgactgggac ggagccatgg aggtcatgca ggtccgcccc
    11881 tcgcacccca agagttacga gcgggtctgc catgacacgg cgctcccggc gttcctgctg
    11941 ccgctccgga ccgcgccgag ccgcgcggcc cgcgaggcac tcatgtcgga gcggctcgag
    12001 cgggccatcg gggtgatcta ccggccacgt accgaggtgc agagccacta cttctacgcc
    12061 tcgttgccac agcaattcga cgagtggatc tggttcgacg aaacccgggc ggtggatccc
    12121 ctccccgtcc cggcggcggg agaaggactg cccgagacct ggcccttcgg ggtctgaccc
    12181 ttcgcgggac tatccgggcc ccctccggta gcccttacct tatatccggg gttcgattgg
    12241 taggaagcgg gataaggtca gggcttacag gtgaggacgg gatgtcgaaa cgcccgccgc
    12301 gaaaccaggt ggtcggtgcc cggttctggg agagcgtcac caaggaacat gaggccaccc
    12361 gcgccgagat ccgcttcttc ggtgtggtga agcgcgtccc tgtgggcgcc ttcccccgga
    12421 agcactccga tttcagggcg atggcgctgg aatgggacga gtcgccggag gcgctccgcc
    12481 aagacctccc gccatcgctc ccagtgagca tgcaggggtg ggagccgctc ccgggggcta
    12541 cggtcgagcg gtacgaggcc ttcgaccggg aaaccggcga tctcctgatc ttctggcggg
    12601 taccctgccg gcggaagtaa ctcgactcgg cggcgctgtc gcgctgctcc tgctcgccgt
    12661 ggccccggct ccggcccaaa cgctggggac catcctgggc gagtacgccc tgccggctcg
    12721 cggcctggcg gccggcgacc tcgaccaccc gatcaccggc tacgccgtcg agaacgcggg
    12781 cgacctcttc gtcattgcct tcgttttcgc cgacaccagc ggcgtttcct ttcccgacac
    12841 gctgcggttg agcagcttcg accgcgtcgc gggggtctgg acccacgcgg ccatcgagcg
    12901 ccgccgcctg ggcgagcccg gccgggatat cggctccgtc gtggccatcc accctacggc
    12961 gcgccacgtt ttcctcgaca ctcacggcaa cccctccgcg ggaacgttgc tggtattcac
    13021 ccgggacctg gctccggtgg cggcactcga cgggtggttg ctgcgattgc ttccgggcgg
    13081 cctcgcggtg tatcaccaga gtatgattca cttcgccccg acccactccg ccgagctccg
    13141 gctgtacgac gcggactcgg ggcgcgacgt aacgctgtat ccccgggagc cggacggtcc
    13201 ggtgcgccgc cgctatgtcg cggccacgcg gcagcaatac gcccgggtcg gggcggactg
    13261 gtttcgcaac aacaaccacc cgatggaccc ccggcggttc accagcgcgc tccgggattc
    13321 gctggtcacc aatgccgcgg ggaccgcgct cgcgttcctg atgcggttcg gcaacgaagc
    13381 cgcgacgccc gtggcaacgc cgctgctcga cgtcgtggtg cattgccgcc aggtcaggtc
    13441 gacccagcct cagtgctccg agacggaact ggccacgctc cagcggcggc acccgcggtg
    13501 ggacaccagc cggatcctcc acagcctgtt ggggagggat cctgccgcac tgcgtggtcc
    13561 gccataggat ggcgcgatat ggagacagcc cgcgagccct ctggcgggag cggggcaggt
    13621 taggcatttt tgaggcggct ctcagagggg gccgtcatga cacctcccac acccggaccg
    13681 gtttcgtcca gcgatcggcg cagtcacact cgcgtcacct ttaccccatt ccagcggccg
    13741 acgttcttgc tgcccatggg ccgtcacgat gtgctcgatg cctcactcag cggtctgcgg
    13801 attctccaca cctcgctggt tcgcccccag gtcggcagtc gcatcagcgg aacgctccag
    13861 tggattcacg gcgaaccgcc cctgcagctg agcggcacca tcgtgcgggt ggggcggaac
    13921 gacttcgcca tgacctgcga tccgggcacc attccgctgg ggtaccttcc ctgggccacg
    13981 tcccgctgaa ccctttcgcc ggtcattcat gagaatccgt ctactcaccg cggtgttgct
    14041 ggcggccgcc gactgttccg ctcccgcgcc cccgtcggcg ccgcctccgg tcgagccgga
    14101 tcgggtgcgg tcgctggtct tcactctggc ggcggacagc atggagggcc gtcgcaccgg
    14161 cacccgcggc atcgagcgcg cggcccggtt cctggcgggc gagatgcaac ggttggggct
    14221 cgctccggcg ggcgacagcg gattctatca gcgggttccc ttgtcgcggg cggcgaccgg
    14281 acgactgatg gtggcgccca gcatggaggc gctggacacg gtgccggccg agcggcggac
    14341 agccgcctgg aacatcatcg gcgtggtgga gggcggcgag ctcagggggg aagtggtgct
    14401 ggtcagcggc cactacgacc acgtggggat gcggcggatc gacagcgcca ccagcgacac
    14461 ggtgttcaac ggcgccgacg acaacgcgtc gggcaccgtc gcgcttctcg aagtggcgcg
    14521 gctgattcac ctggggccgg tcccccgccg cagcgtcgtg ttcgtcgctt tcaccggcga
    14581 agaactgggc ggcctcggca cccagcgcta cctgaccgcc ccggtgcgcc cgctggagaa
    14641 gaccgtggcc aacttcaaca tcgagatgat cggccggccc gattcgctgg cgggcggagc
    14701 gggccgggcc tggctcaccg gatacgaacg atccaacatg ggtgaccagc tgaaagcggg
    14761 cggcatcccg atcgtgccgg acccgcggcc cgaccagaat ttcttccgcc ggagcgacaa
    14821 ctaccccttc gcgctgcggg ggataccagc ccataccttg tcgactttca accttcacgc
    14881 cgactaccac cgtccgtcgg atgagccgga ccggctggac tatcagcaca tggcccaggt
    14941 gatcgacgcc gcggtcaagg ccgtccggat tctggccgac gggccccggc cggaatggaa
    15001 gccgggaggc agacccgagc cgaaccgctg accctcgggc ttcgccgcgg tcagtgggtc
    15061 gggcgctgta ccagcagggg caggtaggta tcgatctcga gcgtgacggc ggcgtgggtg
    15121 tgacccagat cctgatcggt gggccacagc tcgtcatcga gatggccctg cgacacccgc
    15181 cagctcacgg ccccgccacc gtgcgcagcc aggtgtggcc cccccgggtc agcagccggc
    15241 cccgctcgag cgccaacccg gcggtgtgca gttgcgcgtg gatcgggttg ctccaccggg
    15301 tgacgcgacc gttgatcctg cctcagcggg tcatcgtcgc ctcggaagac tccgcgggtc
    15361 gaccggtcat ccagctctgg cgactcgatc gcacgccctg acgggatcta cttgcccacc
    15421 cagccggcgc gccccgccgg agtgcgcacc aggagatagt ctccaaaccg gcccagcacg
    15481 gccacggaat caccggccgc catttccgcg atgatctccg cgggcctgct ggtgtcaccc
    15541 ggctgtgaca gcaccgcatt ccctcgtttc agcgtggcgg tttccaccgc gtccaacgcg
    15601 ggttcgatgg aacgtgcgat cacgtagccg gtagtccggt ccggcagccg aacccgatac
    15661 cagtcgccca ccgccgcaag gacccgcatg gcggtgtgac gcggcatcga gcccagctgc
    15721 gtagcgcgcc catcgggccg gtcccggagg gcgatccggt cctttggggt ccgagtccac
    15781 gcgcccagca tcgtggtgtc ggctgcgagc gggggctgct cgccgggggg ccgatgcacg
    15841 aaccaccagg gatccaccgg cccctccccc cgacggtaga ccccgaaatg caggtgcggc
    15901 ggcgacgtca ccgcgttgcc ggtgttcccc acccagccga tggtgtcgcc cggtgtgacc
    15961 tggtcgccct ggctcacgtg ctgccggtcg agatgagcgt agtacagcgc gttgccccgc
    16021 cggtcgcgga gccagaccac tctgccgccg cgggccgtgg tctcgacccg caccacgttc
    16081 gcctcggctg ccgccaccgc caccgtgccg cgcggcgcga agatgtcgat gccgtggtga
    16141 tcgcgggcgc cgccgtcgcg gggcgccccg aaacggctgc cgacatcgcg gtcgcggccg
    16201 ttgagaatag gaaacgtcag gatcggcccc acctggagtg acattcggag ccgcccgccg
    16261 cgcagcagct cgggctggac ccggaagacg aactcaccgt cctggcgcgg ctcgaagctg
    16321 atcgcccgtt cgccgctgtc ggccgtcgcc acctgccgga aggtcgcggc ggagtcagtc
    16381 cccacttccc aggcttccag aaaaaccagc gtcaccgagt cgcccggcag ctcggtctcg
    16441 aaccggattc gctgaccccg gcgggccttg acccgaagtg ccagtgccgc gggttcggcc
    16501 ggcgggaggt aagcctcttc cacgtgggga gccttgacgg cgggcgcctc gcgcagggcc
    16561 cgctccgccg ccgtggtcca gtcccgcacc agcgcagtgc ccgccaggcc ggcgccttgg
    16621 agactcgcct cgtagcgctc ccggggcgtc cggtgatcga agagccggcc cggtacctgc
    16681 tccagcaccc gacatccgag agccgcgccg accagcgcta ctgccgtcac ccagctgccg
    16741 ttccgcatac ccaaccgacc cctcccggag ttcgcgagta tactacggcc gagcgccgat
    16801 ccgagttccc gcgaggcgtc ttcggccacc aaggccaaac agttacgcac gcagcgcccg
    16861 cccaatgcac cctagcaccg ggggatccgc catcatggat gagtccaggt gaccgcctcc
    16921 agccgtccgt tcgtcctggc cgaagcgacc tggacctcgg tgcgggaggc cccattcgaa
    16981 gtggcggttc tgccctgggg cgccactgaa gcccacaatc gtcacctccc ctacgcgacg
    17041 gacaccatcc agtccgaggc tgtcgccatt gaggcggccc gtcgcgccag cgaggccggt
    17101 gcccgggtcg tggtgctgcc atcgattcca ttcggcgtga ataccggcca gcgcgagatc
    17161 cccctgtgcc tcaacctgaa ccccagcacc cagaccgccc tgttacgcga tctgctgcgg
    17221 agtctggccc cccacggcgt ccacaagctc gtgatactca acgggcatgg cgggaatgac
    17281 ttccggcaga tcatccggga gctgcagccc gagaccgaac tgctcctgtg ccagctcaac
    17341 tggtacgcgt gcgtggatcc ccggcccttc ttctcgttgc cgggcgatca cgccggcgag
    17401 ctcgagacca gcatgatgct ccatctggcg cctcgactgg tccggccgct gagcgaggcg
    17461 ggtcccggcc gggcccgcca gttccgagta caggcctttc gcgagggatg ggcctggacg
    17521 ccgcggaaat ggatcgaggt gaccgacgac accggggtcg gggatccatc ggccgccgcc
    17581 gaatccaaag gcgcccggtt cttcgaagcc gtggtggaac gcgtggccgg cttcctgagg
    17641 gaactggacg gggtgaatcc ggaggcgctc taccaatgag gccgtgacgg cctgaaggtg
    17701 gccctccgcc ttgcgcccgg cctgtcggcc tgtctatttc cggccgcaac caactggaca
    17761 acaccttgcc gactcagcct ctcgtcttga tcactggtgc gaccggcaaa cagggtggcg
    17821 cggttgctcg tgcgctggcc gggaaaggat tccggctccg ggccatgacc cgcaagccgg
    17881 agagcacggc tgcccaggcg ctgcagcaga gcggagtcac cgtggtccgg ggcgatctgg
    17941 atgacgccga gtcgcttcgc cacgccctgg acgacgcgtg gggtgttttc gcggttcaga
    18001 attaccggga agccggggtc cagaaagagg aggagcaggg taagcggctc gctgccctgg
    18061 cccatcaggc cggagtgcag cactacgtct acagctcggt agcctccgcc caccgcaaga
    18121 ccggcatccc gcacttcgac aacaaatggc gggttgagga agtggtgcgg gagctgggct
    18181 tcccctcgca cgtcattcta cggccggtct tcttcatgga gaatctcttc ttacctatgt
    18241 tcctgaacgg cggcaagctc accgccgccc tggatccggc cacggtactg cagatgatcg
    18301 cggtggaaga catcgggaaa tacggcgccc gggccttcac cgacgcgtcc cggctcagcc
    18361 ggcgcgagat cgacctcgcc ggcgacgccg ccaccatgcc cgaggccgcc gccaccttgg
    18421 gccagggact gggccgccag atcgaattcg ttcgcatccc gatcgaggaa atccgccagc
    18481 acagcgacga taccgccctc atgctcgagt ggttcgaccg ggtgggcttc aacgtcgaca
    18541 tccaacgact ggagcaggag ttcggcatca gctccatcaa actgaaagat tgggccgccc
    18601 gacagcgatc ctagtccggt cccggcaccc tggttcggat gccccaacac cggggctaga
    18661 ttgggccatg gcctgcaggg ttccggatct tgccgcataa cgtcgcactg atcgccacca
    18721 tcgcggccgg cctggggctg gcgttggtga tgggcttcat caccacccgg ctgggcctgc
    18781 ccggtctggt cgggtatctg ctcgccggaa tcctgatcgg ccctttcacc cccggattca
    18841 tcgcggacat ctccctgtca cagcagctgg ccgagatcgg cgttatgctg ctgatgtttg
    18901 gcgtggggat gcacttctcg ctggaagacc tgctgtcggt ccgcggcatc gccctgcccg
    18961 gagcgatcgc ccagatcatc gtggcgaccc tgctcggtat cgcggtctcc agcctgtggg
    19021 ggtggagcct cggtaccggc ctggtattcg gactcgcact gtccgtggcc agcacggtag
    19081 tcctgcttcg cgcgctggag gaccgcggcg tgctggactc ggtgaacggg cgaatcgcgg
    19141 tgggctggct ggtggtcgag gatctggtga tggtgctggc gctggtcctg ctcccgcccc
    19201 tggcagcctc gctgggcgga accggaccgg ccgaggccgc ggcccggtca ttgccgctta
    19261 ccgtcggcct gaccctggcc aagatctcgg cgttcatcgc ggtgatgctg atcgcgggac
    19321 gacgggcgtt cccatggctg ctggcccagg tggctcgcac cgggtcgcgc gagcttttca
    19381 ccttgtgcgt catcgcggtt gcgttaggca cggcgtacgc ctcggccgcg ctgttcgggg
    19441 tctcgttcgc gctgggtgcg ttcttcgccg gtgtggtggt gggcgggtcc gatctgagcc
    19501 agcgggccgc ccaggaatcg ctcccgctcc gcgacgcctt cgcggtcctg ttcttcgtct
    19561 cggtggggat gctgttcgat ccggccacgc tgatcaggca gcctctccag gtgctggcgg
    19621 tggtcgccat catcatggtg gggaaatcgc tggctgcctt cggcctggtg ctggcgtttc
    19681 gttacccgct gaacaccgcg ttgaccgtct cagccagcct ggcccagatc ggcgaattct
    19741 ccttcatcct ggccggcctg ggcgtctcgc tcgggctgct gcccaccgaa gcgcgaagtc
    19801 tcatcctggc cggggcgctg ctgacgattt cactgaaccc ggtcgtgttt cggctgatcg
    19861 agccagccca ggcctggatc cggtctcgct ccaatctggc ccgtgccctg gaacggtccg
    19921 acgacccgtt ggccgagctc ccccaaagcg tcgatctgca tcgcctcacc ggccacgtgg
    19981 tgctggtcgg ctacggccgg gtgggccgcc ggatcggccg ggcgctggtc gatgcggacg
    20041 taccgttcgt cgtggccgaa cagaatcggg aggttgtgga agccttgcgg caggatggcc
    20101 tggcggcggt ctcgggagat gccgccgagc cggcagtact gattcaggca cacatcgcgc
    20161 gggccggcat gctggtggtc gcggtgcccg atgccttcgc ggccggccgt atgatcgaaa
    20221 ccgcccgccg actgaacccc accatcgatt ccgtggtccg cacccacacg gaagctgacc
    20281 gggtcctgct ggagtccgct cgcgtcggcc gggtgttcat gggcgagcac gagctcgcaa
    20341 tgggcatgac ccgccacatc ctggaacgga tcgcggcggg ggtgctcggt gtcggaaagc
    20401 gcggggaacg ttccggcctg ccgcaactcc agtgagcgtt actgcgccac gaccgagccg
    20461 atcatcccgc tggtaaagct ggtggaatgg ttggtacacc ggtaacggaa tgtgccggcc
    20521 gtgccgaagg tacggtccac gctgccggtg gtcttcccgg gcgacgaacc cacgttgtcc
    20581 tcgaacgtca gcgtgtgttc caagccaccg cgccagttcc aggtgacggt ggtaccggcc
    20641 gtcacggtga tcggcgtggg ggtgaagaaa ttgtcccgga tgtctaccgt cccgggcgcg
    20701 ggaggcggtg gaggtggtgc cggcgggggg ggaggcggcg ggttcggtcc gtaggaggaa
    20761 tccccgccac tcgagcaggc aaccgcgaag agcacgatgg ccaacgcggg gaaccgcagc
    20821 cgagacatgt gaacctcctg gtcgaacgct ggaagatacc gctgtaccac taaattctcc
    20881 ccatgcctcg catagcgctc gtgggggact actcgccggc cgtcaccgct caccgggcca
    20941 tcccgctggc cctcgagcgc gccgtgcgcg ccagcggccg agcggtgacc tgggactgga
    21001 tcggcaccgc ctcactcgag ggcgatattt ccgcccggct ctcgggctac gccggcgtgt
    21061 ggctggttcc ggccagtccc tacgccaaca ctcggggcgc tctcgcggca atccgcttcg
    21121 cccgaacctc ccaccgcccc tacctcggta cctgcgccgg atttcagcac gccttgctgg
    21181 agtatgccga atctgaatgg ggcgtcgaac ctgcggcgca tgccgagctc gagcccgccg
    21241 ccagcgatcc ggtgattgcg ctcctttcgt gcagcatggt cgaggtgaag ggcacgattc
    21301 agctgctgcc cggaacccga ctggcggcgc tgtacggaac cctggaagcc acggaagggt
    21361 accactgcaa ctacggcctc aatcccacct gggccagccg actcgagaac ggccccctcc
    21421 gggttgcggc ccgcgaccag gctggtgaag ttcgcgcgat agagctggaa gaccatccct
    21481 tctttttcgc gaccttgtat caaccggagc gctccgccct cgcggatgcc gatcatccgt
    21541 tgatccgcgc ctacgtgacc gccgtcgcca cggtgtgagc gtccttccac cgcacacgtc
    21601 acctctcata cagacggcga gcagcccctg atgaccaccg acgagtgacc atgcctgaaa
    21661 aaactcccca aaagcgcgct cgcggccgcc cgggaaggga aatccccctc gacccaggcc
    21721 ggcgaattcg ttcgggaaga aatccatcac ctccgcgaag gcaagcacgg cgcccgctcg
    21781 accaaacagg cgatcgccat cggcctttcc aaggccaggc gggccggcgt gaagctcggc
    21841 acgccccaac gagcttccga agacactcgg gagcaggccc ggcgcgcccg ctgatttcgt
    21901 acctcgcctg actctccctg gtggagtcag gcgagttcgt attccagggt gatgggatat
    21961 cgctctgcgt ggcccgacgc aaagccaccc ttacctttga gcccggccag ctctcccgtc
    22021 cccgatcccg gcaccaccgt ccaggtcgtc ttcgatactc cgtcctcaaa cacgccttcg
    22081 tgcaacagga cgaagctgcc gcgcttgccc gccagctgtc ccgtgatccg ctccagcccg
    22141 acataggtgg cggtgccatc atcccggtac atcatcaggt actccacctt gctctcgccc
    22201 tccacgtcgc cctggaactt cttggagacg ctggcacggg tcattttcgg cagcacctcg
    22261 ccttcatcca acggcttttc gttccatccg gtgagctcga acgtcgcggt
//
LOCUS       DASWKS010000184         2922 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_454779, whole genome shotgun sequence.
ACCESSION   DASWKS010000184 DASWKS010000000
VERSION     DASWKS010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454779"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VGA78_05385"
     CDS             <1..324
                     /locus_tag="VGA78_05385"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX9893333.1"
                     /translation="QQTAIAGLRPGQSGQEADRLARVSLSGAGLGAAFRHSLGHGIGL
                     EVHEDPRLAPTADGLLPAGAVVTVEPGVYFEDWGGIRLEDDVLLTAHGPALLSPGAPP
                     LRVVP"
     gene            356..877
                     /gene="accB"
                     /locus_tag="VGA78_05390"
     CDS             356..877
                     /gene="accB"
                     /locus_tag="VGA78_05390"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEX9893334.1"
                     /translation="MNPEDTQRLAELLAQVPGFRGIDVKDVRRLVELLRATPEIGSIE
                     VKGLFGTGVVITRTATNSVPAPVPVSIAPGAHHPSAGAAPVAAPAPAVQLKEIRSPMV
                     GTFYAAPEPGAEPYVRVGQRVAAGQTVCIVEAMKIMNEIEAELGGVIREVSVEDATPV
                     EYGQVLFRVDPNG"
     gene            870..2042
                     /locus_tag="VGA78_05395"
     CDS             870..2042
                     /locus_tag="VGA78_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEX9893335.1"
                     /translation="MADKDVESFASAPLFNFKQAISQMVQRAASDLLLKVGRPPAIRL
                     NGELNSLNMQPLRPEDLKALAEQIMTPRQIKEFAERKEADFAIGVPGVGRFRTNIYQQ
                     RGTLAFALRSIPYEVKSIQELNLPEVLEEVALKPRGLVLVTGVTGSGKSTALAAMMNH
                     INRHRRVNIITIEDPIEFLHRDAMSNISQREVGSDTLSFSTALRHVLRQDPDVILIGE
                     IRDQETLDTALKAADTGHLVFSTLHTTDATQSINRVLSFYPPHEHTEIRSVLSTALAA
                     IISLRLVPRADGRGRVPACEVLINTAAVAENVRDVAKALNIPDLIAEGSMSYRMQTFD
                     QSLMQWYKHGAISYESALFYATNPSEFALRASGISSASDHSLSAMPGLVLGGDRNI"
     gene            2042..>2922
                     /locus_tag="VGA78_05400"
     CDS             2042..>2922
                     /locus_tag="VGA78_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX9893336.1"
                     /translation="MFNKVLIANRGEIALRVIRACRELGIRTVAVYSEADRESLHVRF
                     ADDDVCIGPAPSRMSYLRIPAIIAAAEITGADAIHPGYGFLAENAEFADTCRASNITF
                     VGPTGEQIRQMGDKASARRLAQEAGVPTAPGSTGILADADEALEVARGIGFPVIIKAT
                     AGGGGKGMRIAQDPEQFGQLFSLAQNEALSAFGNGDVYVEKYLARPRHVEIQILGDSH
                     GRVVHLGERDCSVQRRHQKLVEESPSPALDDELRARMGESAVRLASAIGYVGAGTIEF
                     LLDRDGRFYFMEMNTRI"
BASE COUNT          486 a         1018 c          944 g          474 t
ORIGIN      
        1 cagcagaccg ccatcgcggg cctgcggccc ggacagtccg gccaggaagc cgaccggctg
       61 gcgcgcgtca gcctcagcgg cgccggcctg ggagccgcct tccgccactc gctgggccac
      121 ggcatcggcc tggaagtaca cgaagacccc cgccttgccc ccacggccga cggcctgctt
      181 ccggccggag ccgtggtcac ggtcgagccg ggcgtctatt ttgaagactg gggaggcatc
      241 cgtctggaag acgatgtcct cctcacggcc catgggccgg cgctcctttc gcccggcgcc
      301 cccccgctgc gggtggtgcc gtagctccgg gcgaagtcac cttcgaccgc ccactatgaa
      361 ccccgaagac actcagcgac tcgcggagct gctggctcag gtccccggtt tccggggcat
      421 cgacgtcaag gacgtccgcc ggctcgtcga gctgctgcgt gccaccccgg aaatcgggtc
      481 gatcgaagtg aagggcctct tcggcaccgg ggtggtgatc actcgcaccg ccaccaattc
      541 ggtgccggcc ccggtcccgg tgtcgatcgc cccgggggcg catcacccat ctgccggggc
      601 ggcgccggtg gccgcccccg ctccggcggt ccagctcaag gagatcagat cgccgatggt
      661 cgggaccttc tacgctgcgc cggagccggg tgccgagccc tatgtccggg tgggccagcg
      721 ggtcgcggcc gggcagacgg tgtgcatcgt cgaagcgatg aagatcatga acgagatcga
      781 agccgagctc ggtggtgtga tccgcgaggt cagtgtggaa gacgccacgc cggtcgagta
      841 cggccaggtc ctcttccggg tggaccccaa tggctgataa agacgtcgag tcctttgcct
      901 ccgctccgct cttcaacttc aagcaggcca tctcccagat ggtccagcgc gcggcgtccg
      961 acctgctgct caaagtgggc cgtccccccg cgattcggct caacggcgag ctcaactcgc
     1021 tcaacatgca gccgctccga cccgaggatc tgaaagcgct ggcggaacag atcatgactc
     1081 cgcggcagat caaggagttc gcggaacgga aggaagccga ctttgccatc ggcgtgccgg
     1141 gcgtggggcg gttccggacc aacatctacc agcagcgcgg cacgctggcg ttcgcgctcc
     1201 ggtccatccc ctatgaggtg aagtcgatcc aggagctcaa ccttcccgaa gtcctggaag
     1261 aagtcgcgct caagccgcgc gggctggtgc tggtgaccgg tgtcaccggc tcgggcaaat
     1321 cgacggcgct ggcggcgatg atgaaccaca tcaaccggca tcgccgggtg aacatcatca
     1381 ccatcgaaga cccgatcgag ttcctgcacc gcgacgccat gtccaacatc tcgcagcgcg
     1441 aggtgggcag cgacactctc tcgttctcca ccgcgctgcg ccatgtgctg cggcaggacc
     1501 ccgacgtcat cctgatcggc gaaatccggg accaggaaac cctcgacacc gcgctcaagg
     1561 cggccgatac cgggcacctg gtcttttcca ccctgcacac caccgacgcg acccagtcca
     1621 tcaaccgggt gctgtcgttc tatccgcccc acgaacacac cgagatccgt tcggtgctct
     1681 cgaccgcgct cgcggccatc atctcgctgc ggctggtgcc ccgggccgac ggtcggggcc
     1741 gggttcccgc ctgcgaggtg ctcatcaaca ccgcggccgt ggccgagaac gtccgcgacg
     1801 tggccaaggc gctcaacatc ccggatctca tcgccgaagg gtcgatgtcg taccggatgc
     1861 agaccttcga ccagtcgctc atgcagtggt acaagcacgg cgccatcagc tacgagagcg
     1921 ccctgttcta cgccaccaat ccgagcgaat tcgcgctcag ggcctcgggt atctcctcag
     1981 cgtccgatca ttcgttgtcc gcgatgcccg gtctcgttct cggcggcgac cggaacattt
     2041 gatgttcaac aaggtgttga tcgctaaccg cggggagatc gccctgcggg tgatccgcgc
     2101 gtgccgggaa ctcggcattc gcactgtcgc ggtctacagc gaggcggacc gcgagtcgct
     2161 ccacgtccgc ttcgcggacg atgacgtctg catcggcccg gcccccagcc ggatgtccta
     2221 ccttcgcatt cccgccatca tcgccgcggc cgagatcacc ggggccgacg ccatccaccc
     2281 gggctacggc tttctggccg agaacgccga gttcgccgat acctgccggg cctccaacat
     2341 caccttcgtg ggccccaccg gtgagcagat ccgtcagatg ggagacaagg cctcggcccg
     2401 ccggctggcg caggaggcgg gggtaccgac cgcgcccggt tcgaccggca ttctggcgga
     2461 tgccgacgag gcgctggagg tggcccgggg catcggattt ccggtgatca tcaaggcgac
     2521 ggccggaggg ggcggcaagg gcatgcgcat cgctcaggat ccggaacagt tcggccagtt
     2581 gttcagcctg gcccagaacg aggccctgtc agccttcggc aacggcgatg tgtacgtgga
     2641 gaagtacctg gcccggccgc gccatgtcga gatccagatt ctgggagaca gccacggccg
     2701 ggtggttcac ctgggtgaac gggattgttc ggtccagcgc cggcaccaga aactggtcga
     2761 ggagagtccc agccccgctc tcgacgacga gctccgggcc cgcatgggtg aatcggcggt
     2821 ccggctcgcg tccgccatcg gctacgtggg cgccggcact atcgagttcc tgctcgaccg
     2881 cgacggccgc ttctatttca tggagatgaa cacccggatc ca
//
LOCUS       DASWKS010000185        18483 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_455168, whole genome shotgun sequence.
ACCESSION   DASWKS010000185 DASWKS010000000
VERSION     DASWKS010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 18483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18483
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455168"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VGA78_05405"
     CDS             <1..216
                     /locus_tag="VGA78_05405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893337.1"
                     /translation="RIRVVSAERRSQSQNRDAAVERFVRLLAASLQVARPRRKTKPTR
                     ASVERRIRSKKRRGDTKLGRRPVRGEE"
     gene            213..533
                     /locus_tag="VGA78_05410"
     CDS             213..533
                     /locus_tag="VGA78_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4031 domain-containing protein"
                     /protein_id="HEX9893338.1"
                     /translation="MTEPGWRYFGTREVLLARSWATSGGIAVHENLFRLRGHRTAHLL
                     APTEELLLAAARSIGCQDEWIQRTGTVHFDLILEVLERALRNCGVDPARPPVRRVWSD
                     QGRV"
     gene            585..1283
                     /locus_tag="VGA78_05415"
     CDS             585..1283
                     /locus_tag="VGA78_05415"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX9893339.1"
                     /translation="MHLLLESHENRSTPAGMAVSIAIHAVLVLFLVAAYRDTPDQPGL
                     MEQFVTFLVPPDNPSAQRGADAARWNSSTSQDPGKENDTGTGGAPAMGTGPLMADSGE
                     SAAPAPISIDLPSLLGDSIHLEIDVDSAVKRFEWSAAPEYPLNLLRQEIQGNAFVIYV
                     VDTTGVADSTSLQVVKASHTDFVEAVRKALPRMRFRPAILGGQKVRQLVQQNFAFKIQ
                     KPDTLLPARAPQQQ"
     gene            1293..2054
                     /locus_tag="VGA78_05420"
     CDS             1293..2054
                     /locus_tag="VGA78_05420"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003814.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEX9893340.1"
                     /translation="MPRIDLNADLGESYGRWRLGHDAELFPLVTSANIACGFHAGDPV
                     VMRESVGLARRHGVAIGAHPGYPDLLGFGRRALEAAPAEIEAWMVYQIGALAACCRAE
                     GATLKYVKPHGALYNTAVKDRATAEAIVRAVALVDPALVLLALPRGEMAGAAERLGLP
                     FAREAFVDRNYEPDGSLTPRSRPDAVLSDPVLCADRAARMVLDRIVEARDGTMLELEP
                     DSLCVHGDGPAALTVLRATRERLQQSGVTVAPFAP"
     gene            2051..2698
                     /gene="pxpB"
                     /locus_tag="VGA78_05425"
     CDS             2051..2698
                     /gene="pxpB"
                     /locus_tag="VGA78_05425"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEX9893341.1"
                     /translation="MNEPRCVPLGDSALTLVFGEVIDPVVHRRILAVAGRLARRPPRA
                     VREVVPAYTTIAIWFDPLEREAAGLAAELLDIALSVTSDAADAPGREWIIPVRYDGPD
                     LAEVATRLGLGIEDVVRRHQQRAYRVFLLGFVPGFAFLGELDPALVLPRRAAPRRKVP
                     AGSVAIAGVQTGVYPIDTPGGWHLIGRTDLALFDPRRDPPTLLDVGDSVRFEAVP"
     gene            2695..3642
                     /locus_tag="VGA78_05430"
     CDS             2695..3642
                     /locus_tag="VGA78_05430"
                     /inference="COORDINATES: protein motif:HMM:TIGR00724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEX9893342.1"
                     /translation="MIAVTRAAPFMTVQDRGRGGLRAKGIPPSGAMDPETLAWANLLV
                     GNPVEAAGLEWALGSGQVKLREPRALVAAGAPLTLNGLTVPPWTAVVVSPEDQVEIGL
                     PQRRFAYLAVAGGIAVEPVLGSCSTYLVAGFGGHEGRRLKSGDRLPLGEAASPPPEPA
                     WSLPPDFGPDAGSTVRVVPGPQSDLFEENAWDLLLGGNYSVAAASDRMGYRLEGPPLR
                     HRGAASLPSEPVCPGAIQVPDGGAPIVLMPDGPTVGGYPKLAVVITADLGIFAQCAPG
                     SRPDFALVTFEEAVAALRARKARLLEGAGLLRQSDLPTI"
     gene            3648..4751
                     /locus_tag="VGA78_05435"
     CDS             3648..4751
                     /locus_tag="VGA78_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9893343.1"
                     /translation="MRYTAAVMPAPHEAIRLERFPAPELQPGAVLLETMFSEVCGTDV
                     HLHRGKLAGVPYPIIPGHVSVGRIAAMRGPVTDVEGQPLGEGDVVTFLDVHETCNRCW
                     YCLVAKQTTRCPSRRVYGITYSASEGLLGGWSQAIWMKPGVKLIRLPPSLAPDTFIGG
                     GCGLVTSLHAVDLARIQLGDTVVVLGTGPVGQSAVALAAASGAVEVIAIGDPADRRAY
                     ALRMGATSVIGLEIPPQDRAAQVRALTGGRGGDVIIEASGAPQAVPQALDLVRDGGRV
                     VVVGQYTDHGEVPINPHAQINRKHVELRGCWGSDYSHFHRAVALAARWSGRIPWRDLA
                     AARYPLERAGEALAAVERREVLKAVIAVEGGRR"
     gene            complement(4814..5749)
                     /locus_tag="VGA78_05440"
     CDS             complement(4814..5749)
                     /locus_tag="VGA78_05440"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX9893344.1"
                     /translation="MDNLCHSLVGAALAETGLRRRTRYATAALVLGANFPDIDIAAGF
                     SEHGLGFRRGITHGILALIVLPFVLTGLLLVWNRLATRSSPLETSSTELLKLSALAIL
                     THPILDWMNVYGMRWLMPFDGTWYYGDSLFIVDPWLLLMLGAAWIGGRRARLPDQGLR
                     RASGERFARRMVALSVAYVVGMMALTRWGQAVAARELDRESPGPRQLMVAPPFLESWR
                     REVTVDAGTGYRFGSIDWVPRPTLELSQDAVAKQLELLDGLPRTVALEDLLDWARFPF
                     AETDGRMVHVDDARYARGGRSFAGIVVLLVEDGRR"
     gene            complement(5865..8489)
                     /locus_tag="VGA78_05445"
     CDS             complement(5865..8489)
                     /locus_tag="VGA78_05445"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893345.1"
                     /translation="MGSLFRRLRYYLRRGRYDADMREELSHHQALAARDAEREGLSPE
                     AARLEAVRRVGRAGRITDASRDVWRLARLETVLQDLRYAFRGLRRQPAHAAAAIFTLA
                     LGIGATTAIATVLNAVLLTPLPYLEPDRLMQVWEHNIPRDRQRNVVNPGNYLDWRNRN
                     HTFSGMALYVSGEATLVRERPLRLSGTRVTVNMLDILGVRPALGRGFVEEDTEPGRPR
                     ALILTDELWRRVFGGDSSIVGQPVALVEGDAFVAGVFPPGFRPLGDEEYWQPVRVPDS
                     ARFLGGRFALVIGRLKEGATVEQADADLRAIAQSLQTEYPRTNSGWTVQVEPLMDKVT
                     GGARQVLVMVAGAIGLVLLIACANVASLSVARVIGRQGELGLRAALGATRGRVIRQLA
                     VEGLVVGTLGGALGVLLGLLAVNGLRAAELSEIPRLQEVRLDPRVLGFALLITVLSGL
                     SCGLLPAFSVGGTTPGGTLVGVAGRSTVSRGGGRIRAGLVVLQVALSLLLLAGTGLMV
                     RSLVRLLDVDPGIEYNGVLTSGISLPFRNYQGERVTTFYREIAARVASLPGVQEVGLT
                     TGLPFTSAGGATSFRDADQPEPEPGAMPAADIRAVDPGFFTTLRIPVLRGRGIEDSDL
                     PGGRPVAVVGQALAEQMWPGAEPLGRRLWVSWGSDAGTTVEVVGVVGNARYWGLHNQT
                     RAAIYFPIQQQPGNYMQLAIRVPGNPAATVPLLERELAVLDPNLPLLNPKPYSALVSA
                     SIGDRRYPMLLLAILAGLALALSAVGLYGVLAYFVGERTREIGVRRALGATDASVIGL
                     VLGKGGRLVVLGLVLGGLAVLGTTRFLQGLLYEVGTGDPIALGGAIMVLAAVGLAASA
                     LPALNAARVDPAITLRGE"
     gene            complement(8506..8853)
                     /locus_tag="VGA78_05450"
     CDS             complement(8506..8853)
                     /locus_tag="VGA78_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893346.1"
                     /translation="MVKRVSPGRSELLPGTLDLLILKTLSLQPLHGYGIAQHLQRLSA
                     DVIQVEEGSLYPALQRMELKGWVKAGWRRTPTGRRARYYDLTTKGRRQLADELSGFDR
                     LMTAIRAVLDPAT"
     gene            complement(9040..11277)
                     /locus_tag="VGA78_05455"
     CDS             complement(9040..11277)
                     /locus_tag="VGA78_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893347.1"
                     /translation="MLLSTLGFLAVLQTSDSAGRPIPPDSYANPATAQLVANARAARD
                     RNERLVTSYTATVKQRLGVGIRALSRDRMLYRQELVARIAWKRDAPSTVEIVGAREGI
                     PIALRGDRLPEDLDAQATSLVLNPAEDYIRLIGGDDDEGLMYPLRQGGEFDYRFEAGD
                     TTTISLPTGRQIRLLALKVIPRRADWQLMSGTLWFDGDTHGLVQAVFRPARPFEFRRD
                     VDPDDREDVPGFVNPVAEVKYITLEYGLYEGRWWLPRYMALDAAGKMGSWLGVPVRLE
                     RVYEDYEVEGGTPPVPGSTFRPAGTVRRRERYDDTPADSTERRRVADSTSAAVKECID
                     RETRRLNSEGWKGRAYRQELRRCWRRPSDSSLVVIVPADTAALLVSPELGEPILQMGD
                     LISEAEIRSLSGAIGDLPGTPWGARVQLPSGVGALLQHARYNRIEALSLGVSGTLDLG
                     PAAVRGTARLGVADLVPNADLSLLRTTSSARLGLTAYRRLATANPDARPFGPINSVLG
                     FLAQRDDGEYYRTLGLELTAQNTNSGWINARVFLQRERPAEVETNASLPHLFDKSNLF
                     RSNFVADSATQLGGSVTVRGSRALSHAVALGGETTVDGATGDFDFGRAAGTVRLFVTP
                     SGPLAGAVSVSAGTSTGTVSNQGRFFLGGPGTLRGYSGGVLAGPAFWSARAEVGNSFP
                     AARVTVFGDAGWAGERSQFSTGRPLIGAGVGASFLDGLVRFDLARGLRDPKGWRLEIY
                     VDGIL"
     gene            11451..12149
                     /locus_tag="VGA78_05460"
     CDS             11451..12149
                     /locus_tag="VGA78_05460"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX9893348.1"
                     /translation="MRITLLESRKPTARPLAQGLLSTGLHVLLVAAAVQATAGAVPSV
                     GRLVQETSLVYVPPPQATPPPAPASEPTEQIEPLQPGFQTVPSVVEVPTSIPPLELGV
                     PFDPDDWKGIGRENGRSRSAPLPSTSRAGSETDPFAAEEVDEPVVPLYQPAPRYPPAL
                     QHVGVTGRVVARFVVDTLGVVEPESWREVSADHGSFAAAAREATLKARFRPARVGGRP
                     VRQLVQQAIIFEMK"
     gene            12449..12949
                     /locus_tag="VGA78_05465"
     CDS             12449..12949
                     /locus_tag="VGA78_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893349.1"
                     /translation="MSGLWQWKRSGAMRVLIVGGVIMMTCRPAPPPVPAGPATQPAQG
                     SGEDEDDDIPPVPDKLNITPDTTLIVARPDSGDVYYRTLLSIAFDDTTSGITVKKVLY
                     QYKGTIVGGYPKLGPKGTYVVQVEDRGPRWPRLAALVDSIRAEKGVFSAAPTAFRAKT
                     NERDSL"
     gene            complement(12987..13466)
                     /locus_tag="VGA78_05470"
     CDS             complement(12987..13466)
                     /locus_tag="VGA78_05470"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HEX9893350.1"
                     /translation="MLAPLMILVAAIGFWPGTPFLRQGTPLDGPRWLAGCWELRGNNR
                     VTLEMWMPPAGGLMLGASRGIIGGAVREFEQLRIKAEGGKLVYTALPSGQKEASFPST
                     QVTDSSIVFENLSHDFPQRIIYRRRGTDSLVARIEGPGPNGVRGFDFPMRRVSCAAQ"
     gene            13579..13983
                     /locus_tag="VGA78_05475"
     CDS             13579..13983
                     /locus_tag="VGA78_05475"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893351.1"
                     /translation="MTRSLGHVTLLVRDYDEAIRYFTAQLGFALLADIPQGGEKRWIL
                     VGPPQSRGASLLLARATTPEQTACIGNQTGGRVFLFLHTDDFSADYLAMKSRGVEFVE
                     EPRQEAYGTVVVFEDLYGNRWDLVQPRTGPAA"
     gene            14013..14690
                     /locus_tag="VGA78_05480"
     CDS             14013..14690
                     /locus_tag="VGA78_05480"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893352.1"
                     /translation="MKTPVVLSWSGGKDSSLALERLLADPGIQVVSLCTTVSAEHDRV
                     SIHGIRRSILRRQATMLQLPLVEVPLGPMPSNSSYEAAFAAGLAQVRTSHPTVSTIAF
                     GDLFLEDVRAYREALLGRLGWTGLYPLWREPTRPLAEYFISRGYRAVLTCVDTTQLDA
                     SFAGRTFDSQLLSDLPPAVDPCGERGEFHTCVYAGPVFHQPIAVRTGEQVLREERFQF
                     CDLLEDL"
     gene            complement(14700..15020)
                     /locus_tag="VGA78_05485"
     CDS             complement(14700..15020)
                     /locus_tag="VGA78_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893353.1"
                     /translation="MRSGEFISGPFDLYAAVWHQGYGKMWFTPVTLPPGTTQSTELNF
                     TLEAVRLDSAGPADGFTKSTLARGLPNGPLFFATGFRLPSPGYWLLTAQAGNNWGCFL
                     FFLL"
     gene            15579..17357
                     /locus_tag="VGA78_05490"
     CDS             15579..17357
                     /locus_tag="VGA78_05490"
                     /inference="COORDINATES: protein motif:HMM:NF019325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CARDB domain-containing protein"
                     /protein_id="HEX9893354.1"
                     /translation="MGVLRNARGAAAFAIITIGATFWSGCSDQVTGPLPVPSASLQAT
                     SPGPQDVSAAIAAQERHTPALRRIPGVIGTAVGLASDGRAVVRIFLSRPDVPGVPDAL
                     DGIPVSRTITGMLVAFGNPTTKARPAPLGYSIGHPSITAGTIGALVRNGSGQTFVLSN
                     NHVLANGNDASLGDPALQPGPFDGGTLADQIGTLFAFKTIDFALNGRNTIDAALALTS
                     EVSNSTPLDDGYGTPGSSIYHDTNDDGLFDNLAGLLNTPVQKYGRTTKLTKGTITGIN
                     ASLTICYEVVIIFCVKSANFVDQLIIEPGTFSGGGDSGSLIVTDDLGKNPVGLLFAGS
                     STQTIANRIDLVLNHFGVAVDGGSAPPPTPTTDAAVTTVTAPSSVSQGTTVNVAVVVM
                     NVGTEPISTPFNVTLQDATDGVPLGTQSVASLAAGAVANLSFSWNTTGASLGDHTLTA
                     SHSLADDNGANNQRSAVSTVNAAGGNGSMHIGDLDGISSNDGTTWSAIVEITVHDANH
                     APLNGATIVGSWSRNGLNANTCTSGDLGGIGTCIVLFPSLSRKSVKSVTFTVNSVTMA
                     GRSYVATSNHDVDGGSNGTSIKLNRP"
     gene            17417..18238
                     /locus_tag="VGA78_05495"
     CDS             17417..18238
                     /locus_tag="VGA78_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893355.1"
                     /translation="MKRRLVCYALAVVLSSSGQPSNAQEPTGLAASALGNPAFTWLRR
                     SVPGFRVYILADSYPARYQDSLLARLPSAARHAEAMLQIEPLAQPIDLFFIESREQMT
                     QLIGARATGFAQPSARAVFLVTNPTWRAFERHEIMHVIAGQAWGRPGPNTDWLVEGLA
                     QAADGRCGSFTNADVLLALATRRGWIPFPTVLTEFRNQPDLRAYLQAAAFVDQLLGRF
                     GPTPLKELWTRGAAVDSVLGGMTLMAIEEEWRAELRETARLSDGELAAIETKGCG"
     gene            complement(18243..>18483)
                     /locus_tag="VGA78_05500"
     CDS             complement(18243..>18483)
                     /locus_tag="VGA78_05500"
                     /inference="COORDINATES: protein motif:HMM:NF024731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HEX9893356.1"
                     /translation="RSSVRANAHMSARDIRHHCRLNPEAEGLLRTAMSRLALSARAYH
                     RVLKIARTIADLSEATDLEAVHVAEAIQYRALDRR"
BASE COUNT         3134 a         6264 c         6121 g         2964 t
ORIGIN      
        1 cggatccggg tggtcagcgc cgagcgacgc agtcagagtc agaaccgcga cgccgcggtc
       61 gagcgcttcg tgcggctgct cgccgcctcg ctccaggtgg cccggccccg tcggaaaacc
      121 aaaccgaccc gcgcgtcggt cgaacggcgg atcaggagca agaagcgccg gggtgatacc
      181 aaactgggac gacgtccggt gcgaggagag gagtgaccga gccggggtgg cgctatttcg
      241 gcacccggga agtgcttctg gcccggtctt gggccacctc ggggggaatc gccgtccacg
      301 agaacctgtt tcgcctgcgg ggccaccgaa ccgcccattt gctggctccg accgaggagc
      361 tgctactggc ggcggcccgc tcgatcgggt gccaggacga gtggattcag cgtactggaa
      421 ccgtgcactt cgacctcatt ctggaggttc ttgaacgagc cctcaggaac tgcggcgtgg
      481 atcctgcgcg gcccccggta cgtagggtct ggtcagacca gggaagggta taggcgagga
      541 cccctacggc gtcttatgtt tcgggggacg tcggagtacc ctaaatgcac ctcctgctgg
      601 aatcacacga aaaccggagc accccagccg ggatggcggt gagtatcgcc atccacgccg
      661 tgctggtgct gtttctggtg gctgcctacc gcgacacgcc cgatcaaccg gggttgatgg
      721 agcagttcgt cactttcctg gtgccgccgg acaacccttc ggcccagcgt ggcgccgacg
      781 cggcccggtg gaacagttcc acctcgcagg atcccggaaa ggagaacgac accggcaccg
      841 gcggggcccc ggccatgggc accggtccgc tgatggcgga ttcgggcgaa tcggccgccc
      901 cggcgccgat ctccattgac ctgccttcgt tgctgggcga ctccatccac cttgagatcg
      961 atgtcgattc cgcggtgaaa cggtttgaat ggagcgccgc ccccgagtac ccgctcaacc
     1021 tgttgcggca ggagattcag ggaaacgcct tcgtcatcta tgtggtggat accacggggg
     1081 tcgcggattc gaccagcctc caggtggtga aagccagcca caccgacttc gtcgaggcgg
     1141 tgaggaaggc cctcccccgg atgcgcttcc gccccgccat cctgggcggc cagaaggtcc
     1201 gccagctggt gcagcagaat ttcgctttca agatccagaa acccgacacg cttcttcccg
     1261 cgcgagcccc gcagcagcag taaattcccg ccgtgccccg gatcgatctg aacgccgacc
     1321 tgggtgagag ttacggccgg tggcggctgg gccacgacgc cgagctcttc cctctggtca
     1381 cttccgccaa catcgcctgc ggctttcacg ccggcgatcc ggtcgtcatg cgcgaaagcg
     1441 tgggactggc gcggcggcat ggggtcgcta tcggcgcgca tcccggctac cccgatctgc
     1501 tgggcttcgg ccgccgcgcc ctggaagcgg cgcctgccga gatcgaagcg tggatggttt
     1561 atcagatcgg ggccctggcg gcgtgctgcc gggccgaagg cgccacgctc aagtacgtca
     1621 aacctcacgg agcgctgtac aacaccgccg tgaaggaccg cgcgaccgcc gaggccattg
     1681 tccgggccgt ggctctagtc gatcccgcgc tggtactgct ggcgctgccg cggggcgaga
     1741 tggccggggc ggccgaacgg ctgggtctgc cgttcgcccg cgaggccttt gtggatcgca
     1801 actacgagcc cgacggatcg ctcacgccgc ggagccggcc cgacgcggtc ctgagtgacc
     1861 cggtgctgtg cgccgaccgg gccgcgcgaa tggtgctgga ccggatagtc gaggcccggg
     1921 atggaaccat gctcgagttg gagcccgatt cgctctgcgt gcacggggat ggaccggccg
     1981 cgctcaccgt gctccgcgcc acgcgagagc ggctgcagca gtcgggagtg acagtcgcgc
     2041 cgtttgcccc atgaacgagc cccgctgtgt tccgctgggt gactcggccc tgacgttggt
     2101 cttcggagaa gtcatcgacc cggtggtgca ccggcggatc ctggccgtcg ccggccggct
     2161 ggcccgaagg ccgccgcgcg cggttcgaga agtcgtcccg gcttatacca ccattgcgat
     2221 ctggttcgat ccgctggagc gcgaggccgc gggactcgcg gccgagctgc tcgacattgc
     2281 gctgagcgtc acctccgatg cggctgatgc tcccggccgc gagtggatca tcccggtgcg
     2341 ctatgacggt cccgatctgg cagaggtcgc gacccgtctg ggactgggga tcgaggacgt
     2401 ggtgcgtcgc catcagcagc gagcctatcg ggtctttctg ctgggttttg tccccggctt
     2461 cgcctttctg ggagagctcg accctgctct ggtgctgccg cgacgcgccg caccgcggcg
     2521 caaagtcccg gccggctcgg tggccatcgc cggggttcag accggggtct acccgatcga
     2581 cacgcccggc gggtggcacc tcatcggccg aaccgatctg gcgttgttcg acccccgacg
     2641 cgatccaccc actctgctcg acgtagggga ctcggtccgg ttcgaggccg tgccgtgatc
     2701 gctgtgaccc gcgcagctcc cttcatgacg gtgcaggacc ggggtcgcgg cggcctgcgg
     2761 gccaagggga ttcctccatc gggagccatg gacccggaga ccctcgcctg ggccaacctg
     2821 ctggtgggga atccggtcga ggcggcggga ttggagtggg ccctcggatc gggccaggtg
     2881 aagttgcggg agccgcgtgc cctggtggcg gcaggcgcac ccctcacgct caacggtttg
     2941 acggtcccgc cctggactgc cgtggtggtg agcccggaag accaggtgga gatcggtcta
     3001 ccgcagcgcc gcttcgcgta cctggctgtg gccggcggaa tcgcggtgga accggtgctt
     3061 ggcagctgca gcacgtatct ggtggcaggg ttcggcgggc acgaggggcg gaggctcaag
     3121 agcggcgatc ggctcccatt gggggaagcc gcatcccctc cgccggagcc ggcctggtct
     3181 ctgccgccgg atttcggccc cgacgctggt tccacggtac gggtggtgcc gggaccccaa
     3241 agcgacctgt tcgaggagaa cgcctgggac ctgctgctgg gtggcaacta ctccgtggcc
     3301 gccgcgtcgg atcgaatggg ctatcggctg gagggtccgc cccttcgcca tcgcggggcg
     3361 gcttcgctgc cgtcggagcc ggtttgcccc ggcgccattc aggtgcccga cggcggggca
     3421 cccatcgtgc tcatgcccga cggtcccacc gtcgggggat atcccaaact cgcggtggtc
     3481 atcaccgcgg acctggggat cttcgcgcag tgtgcgccgg gaagccggcc cgattttgcc
     3541 ctggtgacgt tcgaggaggc ggtcgctgcg ttgcgggccc ggaaggcccg gctgctcgag
     3601 ggcgcgggtc tgctccgcca gtccgacctc cccacgatat gagatccatg cgatacaccg
     3661 ccgccgtgat gccggccccg cacgaggcga tccgcctcga gcggtttccc gctccggagc
     3721 tccagccggg cgcggttctg ctcgagacca tgttctccga ggtctgcggc accgatgtcc
     3781 atctccaccg cggtaagctg gcgggcgtcc cctatcccat catcccgggg cacgtctcgg
     3841 tgggacggat cgccgcgatg aggggtccgg tcaccgatgt cgaaggtcag ccgctcgggg
     3901 aaggcgatgt cgtcacgttc ctcgatgtcc acgagacctg caatcgctgc tggtactgcc
     3961 tggtggccaa gcagaccact cgctgtccct cgcgccgggt ctacgggatc acctacagcg
     4021 ccagcgaagg cctgctgggt ggttggtccc aggcgatttg gatgaagccc ggggtgaagt
     4081 tgatccggct gccaccgtcc cttgccccgg acacgttcat tggtggtggc tgcgggctgg
     4141 tgaccagcct gcacgccgtg gatctggcgc gcatccagct gggcgatacc gtcgtggtgt
     4201 tgggtacggg tccggtgggc caatccgccg tcgcgctggc ggcggcttcg ggtgcggttg
     4261 aggtcatcgc catcggggat ccggccgatc ggcgggccta cgctctccgc atgggcgcca
     4321 ccagcgtcat tgggctggag attcctcccc aggaccgcgc agcgcaggtg cgcgccctga
     4381 ccggcggacg gggcggagac gtcatcatcg aagcatcggg ggcgccccag gcggtgccgc
     4441 aggcgctgga tctggtgcgc gacggcggga gggtagtggt ggtgggacag tacaccgatc
     4501 acggcgaggt gcccatcaat ccccacgctc agatcaatcg gaagcacgtg gagctgcgcg
     4561 gatgttgggg ctcggactat tcccacttcc accgggccgt ggcgctcgcc gcccgctgga
     4621 gcgggcggat tccctggcgc gacctggcgg cggcccgcta cccgctcgag cgcgccgggg
     4681 aagcgctggc ggcggtggaa cggcgggagg tgctgaaagc agtgattgca gtcgaaggcg
     4741 gtcgaagata gtcgaagcag gtcgaagctg gtcttccgcg ctgccgtcta gagccgcctt
     4801 cgaccgcctt cgactatctt cgaccatctt cgaccagcag taccacgatc cccgcgaacg
     4861 aacgcccgcc ccgggcgtac cgggcatcgt ccacatgtac catccggccg tcggtctcag
     4921 cgaatggaaa ccgggcccag tcaagcagat cctcgagggc caccgtgcgc ggcagcccgt
     4981 ccagcagctc caactgtttc gccaccgcat cctggctcaa ttcgagggtg ggccgaggca
     5041 cccaatcgat cgatccgaag cgatagccgg ttcccgcgtc taccgtgact tcgcgccgcc
     5101 aggattcgag aaagggcggc gcgaccatga gctgcctggg tcccgggctc tcccggtcca
     5161 gctcccgcgc ggccacggcc tggccccatc gcgtgagtgc catcatgccg accacgtagg
     5221 ccacgctcag ggccaccatt cgtcgggcaa agcgctctcc cgacgcccgg cgcagaccct
     5281 ggtccggcag gcgagccctg cgcccgccga tccaggcggc tcccagcatc agcaggagcc
     5341 agggatccac gatgaagaga ctgtcgccgt aataccaggt gccgtcgaac ggcatcaacc
     5401 agcgcatgcc gtacacattc atccagtcga ggatcgggtg ggtcaggatg gcgagcgccg
     5461 agagcttcag cagctcggtg gagctggtct cgagcggtga agagcgggtc gcgagccggt
     5521 tccacaccag gagcaagccc gtcagcacga acggcaacac gatcaacgcg aggatcccgt
     5581 gggtgatccc gcgccggaat cccaggccat gttcgctgaa cccggccgca atatcgatgt
     5641 ccgggaaatt cgcgcccagc accagtgccg cggtggcata tcgggttctg cgccggagcc
     5701 cggtctcggc cagagcggca ccgaccaggg aatggcagag gttgtccacc ggaaaatcat
     5761 aacaggtcgg tcagtcggtc cgtcgggcag tcggtcggcc gacagaccga ccgaccagtt
     5821 gtgatgaccg actgaccgac tgaccgaccg accgactggt cgatctattc ccctcttagg
     5881 gtaatcgctg gatccaccct cgcggcgttc agagccggca gcgcgctcgc cgccagaccc
     5941 acggcggcca gcaccatgat ggctcccccc agcgcgatcg ggtccccggt gccgacttcg
     6001 tagagcaggc cctgcaggaa gcgggtggtt cccaggaccg ccaaacctcc caggaccaat
     6061 cccagcacca ccaatcggcc gcctttgccc aacaccaggc cgatcaccga tgcgtcggta
     6121 gcgcctaacg cccggcggac gccgatctcc cgggtccgct cccccacgaa ataggccaac
     6181 acaccgtaga ggcccactgc ggaaagcgcc agggccaacc cggccaggat cgccagcagc
     6241 agcatggggt agcggcggtc accgatagag gccgagacca gcgcgctata aggtttcggg
     6301 ttgagcaacg ggaggttggg atcgaggacc gccagctcgc gctcgaggag tggtacggta
     6361 gctgccggat tgccggggac ccggatcgcc agctgcatgt aattaccggg ttgctgctgg
     6421 atgggaaagt agatggcggc gcgggtctgg ttatgcagac cccagtagcg cgcattcccc
     6481 accacaccga ccacctcgac cgtggtgccg gcatctgagc cccaggacac ccagagccgc
     6541 cgcccgagtg gctccgcgcc cggccacatc tgctcggcca gtgcctggcc cacgactgcc
     6601 accggccggc cacccggcag gtcggagtct tcgataccgc ggccccggag cacgggaatt
     6661 cggagcgtgg tgaagaatcc cggatctact gcccggatgt ccgcagcggg catggccccg
     6721 ggctcgggct cgggttggtc ggcgtcccgg aaggaggtgg cgcctcctgc cgatgtgaac
     6781 ggcagaccgg tggtgaggcc gacttcctgc acccccggga gcgacgccac gcgggccgcg
     6841 atttcccggt aaaacgtcgt cacccgctct ccctggtagt tgcggaacgg caagctgatc
     6901 ccggaagtca acacgccgtt gtattcgatc ccgggatcga cgtccaggag tcggaccagc
     6961 gaacgcacca tcagaccggt gccggcgagc agcagcaggg agagcgccac ttgcaacacg
     7021 accaggcccg cccgaatgcg tccgccgccc cggctcacgg tgctgcggcc cgccactcct
     7081 accagagtgc ccccgggcgt cgttccgccc acgctgaacg cgggcaacag gccgcacgac
     7141 aggccggaca gtacggtgat gagaagggcg aagcccagca ctcgcgggtc gagccgcacc
     7201 tcctggagcc gagggatctc gctcaactcc gcggcgcgaa ggccgttcac ggccagcagg
     7261 ccgagcagca cacccagagc gccgcccagg gtcccgacca ccagaccctc cacggcgagt
     7321 tggcggatga ccctgcctcg agtggctccc agggccgcgc gcagacccaa ctcaccctgg
     7381 cgtccgatca cccgggctac cgacaaactc gccacgttgg cgcaggcgat cagcagcacc
     7441 agcccgatcg caccggccac catcaccagc acctgacggg ccccaccggt cactttgtcc
     7501 atcaggggct caacctggac cgtccagccg gagttggtcc tggggtactc ggtctggagc
     7561 gactgggcaa tcgcgcgtag atcagcgtcg gcctgctcga cggtggcgcc ttccttgagc
     7621 cggccgatca ccagagcgaa ccggcccccg aggaatcgcg ccgaatccgg cacccggact
     7681 ggttgccagt actcctcgtc ccccagagga cggaacccgg gaggaaagac cccggccacg
     7741 aaggcgtccc cttccaccaa ggcaaccggc tgcccgacga tcgaagaatc gccgccgaac
     7801 acgcgccgcc acagctcgtc ggtcaggatc agggcccggg gacgccccgg ttcggtgtct
     7861 tcctcgacga agccacgccc cagcgccggc cgtaccccga ggatgtcgag catgttgacc
     7921 gtcacgcgag tgccgctgag ccggagggga cgctccctca ccagcgtcgc ctcgcccgag
     7981 acatagagcg ccatccccga gaaggtgtgg ttgcggttcc gccagtcgag gtagttcccc
     8041 ggattgacca cgttgcgctg ccggtcccgg ggaatgttgt gctcccacac ctgcatcagc
     8101 cggtccggct caaggtaggg tagcggcgtg agcagcaccg cgttcagcac ggtggcgatc
     8161 gccgttgtag cgccgatacc aagagccagg gtgaaaatgg cggcggcagc gtgggccggc
     8221 tggcgccgga gaccgcggaa cgcgtagcgg agatcctgca gtacggtctc gagccgagcc
     8281 agtcgccaca catcgcgcga cgcatccgtg atgcgcccgg cgcgccccac ccggcgtacc
     8341 gcttcgagcc gcgccgcctc gggggaaagc ccctcccgct cggcgtcccg cgccgccagt
     8401 gcctggtggt gcgacagctc ctcccgcatg tccgcgtcgt aacggccgcg gcggaggtag
     8461 taacggagac gtcggaacag ggagcccatg attcctccga tggacttacg tcgccgggtc
     8521 gagcacggcc cggatagcgg tcatgagacg atcgaagccg gacaactcgt cggccagctg
     8581 gcgccggccc ttggtggtga ggtcgtagta ccgggcccgc cgcccggtgg gagtccggcg
     8641 ccatccggcc ttcacccagc ccttgagctc catgcgctgg agggccgggt agagcgagcc
     8701 ttcttccacc tgaatcacgt cggccgacag ccgctgcagg tgctgggcga tgccatagcc
     8761 gtgcagcggc tgcagcgaca gggtcttgag gatcaggagg tcgagggtcc cgggcagcag
     8821 ctcggaccgg ccgggcgata cgcgcttaac catagtccct ctatacgtag gtagactgag
     8881 tatcgtttca tactgcgagg gaagcaagcg ggggagggag aaggcgggag gcgggaggcg
     8941 ggaggcggga ggcgggagca gggagcaggg ggcagggagc aggagattcc agcctgccgc
     9001 ggcccgcctc ccctctctcg cttcccgcct ccccgtcagt tagaggattc catccacgta
     9061 gatctccaac cgccatccct tgggatcgcg aagacctcgc gccaggtcga agcgcaccag
     9121 tccatccagg aagctggcgc ccacgcccgc gccgatgagc gggcggccgg tgctgaactg
     9181 gctccgctcc ccggcccagc ccgcgtcacc gaagaccgtg acccgggccg cggggaagct
     9241 gttgcccact tccgcccgcg cggaccagaa ggccggaccg gcgagcacgc ccccggagta
     9301 cccgcgcagg gtcccgggcc cccccagaaa gaaccggccc tggttcgaga ccgtgccggt
     9361 ggaggtgccc gccgagaccg ataccgcgcc cgccagcggc ccggacggcg tgacgaagag
     9421 acgaaccgtg ccggcggcgc ggccgaagtc gaagtcaccg gtcgccccgt caaccgtcgt
     9481 ctcgcccccc agagcgaccg cgtgcgagag cgcccggctt ccccgcaccg tgaccgaccc
     9541 gcccagctga gtggcgctgt ccgcgacgaa gttggatcgg aacaggttgc tcttgtcgaa
     9601 caggtgaggc aggctcgcgt tggtctcgac ctcggccggc cgttcgcgct gcaggaacac
     9661 ccgggcattg atccagcccg aattggtatt ctgggcggtc aactcgaggc ctaaggtccg
     9721 gtaatactcg ccatcgtcgc gctgagccag aaacccgagc acgctgttga tcggaccgaa
     9781 gggacgggcg tccgggttcg ccgtcgcgag gcggcgatag gcggtgagac cgagccgggc
     9841 cgagctggtg gttcggagca atgacagatc ggcattgggc accaggtcgg ccacgcccag
     9901 gcgggccgtg ccccgtaccg ccgctggtcc caggtcgagt gtgccgctca cgcccaggga
     9961 caaggcctcg atccggttgt agcgggcgtg ttgcagcaga gcgcccaccc cggaaggcaa
    10021 ctgcacccgg gcaccccagg gggtccccgg caggtcgccg atggcaccgc tcaaactccg
    10081 gatttcggct tcgctgatga gatcgcccat ctggaggatc ggttcgccca gctcgggact
    10141 caccagcagg gcggcggtgt cggcgggcac gatgaccacc aggctggaat cgctcggccg
    10201 gcgccagcaa cggcgcagct cctgccggta cgcacgccct ttccacccct cgctgttcag
    10261 ccgcctggtt tcccggtcga tgcactcctt gacggccgcg ctggtactat cggcgacgcg
    10321 gcgacgctcg gttgaatcgg ccggcgtgtc gtcataccgc tcccggcggc gcaccgtccc
    10381 ggcgggccgg aacgtgctgc cgggcaccgg cggcgttccg ccttcgacct cgtaatcctc
    10441 gtacacccgc tcgagacgga ccggtacgcc gagccaggac cccatcttgc cggcggcgtc
    10501 gagcgccata tagcgcggca accaccagcg gccttcgtag agcccgtatt ccagcgtgat
    10561 gtacttcacc tcggccaccg ggttcacgaa gccaggtaca tcctcccggt catcggggtc
    10621 gacatcgcgg cggaactcga aaggtcgggc gggccggaat accgcctgca ccaatccatg
    10681 ggtgtcaccg tcgaaccaga gggtgccgga catcagctgc caatcggccc gccggggaat
    10741 gaccttgagc gccagcagcc ggatctggcg gccggtgggg agcgagatgg tggtggtgtc
    10801 gcccgcctcg aagcgataat cgaattcccc gccctgccgc agcgggtaca tcaggccctc
    10861 gtcgtcatca ccgccgatca ggcggatgta gtcctcggcg gggttgagga ccaggctggt
    10921 cgcttgcgca tccaggtcct cgggcagcct gtcaccgcgc aaagcgatgg gaattccctc
    10981 ccgcgcgccg acgatttcca cggtgctggg cgcgtcccgt ttccaggcga tgcgcgccac
    11041 cagttcctgc cgatacaaca tgcggtcgcg ggagagggcc cggatgccaa ctccgaggcg
    11101 ttgtttgacg gtcgccgtat aagaggttac cagccgctcg ttccggtccc gcgcggcccg
    11161 ggcattggcc acgagctggg cggtcgccgg attggcgtac gagtcaggtg gaatcggccg
    11221 cccggcgctg tccgaggttt ggaggactgc caggaaaccc agagtcgaaa ggagcatgga
    11281 accggctgct ggaagaggaa tcagttgcca tacgtgaaac ccccattcgg agtttcaagg
    11341 tgtaacatag gtcggattga aacgacactg acgccgacgg ctcatccggt tgtcatcctg
    11401 ctgtaaggcg cgggctctat ccatggtgtg accactatgg aggccgatcc gtgcgtatca
    11461 cgctgctcga atcgcgaaag ccaaccgccc gacccctggc tcaaggactc ttgtccaccg
    11521 gattgcatgt tctgctggtt gcggcagcgg tgcaggctac cgccggcgcg gtgcccagtg
    11581 tcggccggct ggttcaggaa acgtcgttgg tctacgtgcc accaccacaa gcgaccccac
    11641 caccagcgcc agcttccgag cccacggagc agatcgaacc gctccagcca ggattccaga
    11701 ccgtaccttc ggttgtcgaa gtgccaacca gcatcccacc gctggagctc ggcgttccat
    11761 tcgatccgga cgactggaag ggcatcggca gggagaacgg tcgaagccga agcgcgccgc
    11821 tgccgtccac cagtcgggcg ggctccgaaa ccgacccgtt cgccgcggaa gaggtggacg
    11881 agccggtcgt gccgctctac caaccggctc cgcgctatcc gcccgcgctg cagcacgtgg
    11941 gagtgaccgg acgggtagtg gccaggttcg tggtcgatac cctgggtgtg gtcgagcctg
    12001 aaagctggag agaggtgagc gcggatcatg gttcgtttgc ggccgccgcg cgggaggcca
    12061 ccctcaaggc ccgcttccgc ccggcccggg ttggcggtcg tccagtgcgt cagctggtgc
    12121 agcaggccat catctttgaa atgaagtaag cagggagcgg ggagcggggt gtgctgccac
    12181 aacatccttc tgcctgccgg ctgctgcctg ctccctgctc cctgctccct gctgcgcctg
    12241 ctccctgctg cctgctccct gctccctgct gcctgctcca tgctcccggc tccctgctcc
    12301 ctgctccctg ctgcctgctc ccaggtcctg gctcctggct caagtccggc catgtgatgt
    12361 gcaataggca gagatgctcg gcatcccatt tagtgggcgc gccggctgac gggctcgcgt
    12421 gtccacgtct ccaacgcggg ctggtcccat gtccggactc tggcagtgga agcgttctgg
    12481 tgcgatgcgg gtgttgatcg tcggcggcgt catcatgatg acctgccgcc cggcgccacc
    12541 gccggttccc gccggcccgg cgacccagcc ggcccagggc agcggagagg acgaggacga
    12601 cgacatcccg ccggtgcctg ataagctgaa cattacgccg gacacgactc tgatcgtcgc
    12661 ccgccccgac tcgggcgacg tctattatcg cacgctgctc tcgatcgcct tcgacgacac
    12721 caccagcggc atcacggtga agaaggtgct ctaccaatac aaggggacga tcgtcggtgg
    12781 gtatcccaag ctgggcccca agggcaccta tgtggtgcag gtagaggacc gagggccgag
    12841 gtggccccgg ctcgccgcgc tggtcgacag catccgggcc gagaagggtg tgttcagtgc
    12901 cgcgccgacg gcgttcaggg ccaagaccaa cgaacgcgac agtctctaac aaacagtact
    12961 gagtactcag tactcagtac tcagtactac tgagcggcac agctgacccg ccgcatcgga
    13021 aagtcgaacc cgcgcacgcc gttaggtccg ggaccttcga tacgcgcgac cagcgaatcg
    13081 gtaccacggc ggcggtagat gattcgctgc ggaaagtcgt gggacaggtt ttcaaacacg
    13141 atcgagctgt ccgtgacctg ggtggagggg aacgaggcct ctttctggcc tgacggcagg
    13201 gccgtgtaga ccagcttgcc accctcggcc ttgattcgca gctgctcgaa ctcacggacc
    13261 gctccaccaa tgatgccccg gctggcaccc agcatcaggc cgcccgcggg cggcatccac
    13321 atttcgagcg tcacccggtt gttcccccgc agttcccagc aaccagccag ccacctcggg
    13381 ccgtcgagag gcgtcccttg ccggaggaac ggggtaccag gccagaatcc gatcgccgcg
    13441 acgagaatca tcagcggtgc aagcacatgg tcctctttga agggtgtcag tctggtaatg
    13501 tgccgcgtcc cggcgggccg cgatagtaaa aaagcgacat cggcatcagg tttcgggaaa
    13561 ccttggccag gtgtgacggt gactcggtct ctcgggcatg tgaccctgct ggttcgtgat
    13621 tatgacgagg ccattcggta ctttacagcc caactcggat tcgccctgct ggccgatatc
    13681 ccacagggcg gagagaaacg ctggattctg gtgggaccgc cgcagtcacg cggcgccagt
    13741 ctcctgctgg cccgcgcgac cacaccggag cagacggcct gcattggcaa tcagaccggc
    13801 ggccgggtct tcctcttcct tcacaccgac gatttttcgg cagattacct ggccatgaag
    13861 agcagaggcg tggaattcgt ggaggagccc cgccaggagg cgtatggcac ggtcgtggtc
    13921 ttcgaagatc tgtacggcaa tcggtgggac ctggtgcaac cccggaccgg gccagctgcc
    13981 tgaaccgtcc gcccggtgat ctaatgtccc cggtgaagac accggtcgtg ctctcctgga
    14041 gcgggggcaa ggacagctcg ctggcgctgg agcgactcct tgccgacccg ggcatccaag
    14101 tcgtttcctt gtgtactacc gtctcggccg aacatgaccg ggtcagcatc catgggatcc
    14161 ggcggtccat cctcaggcgg caggcaacca tgcttcagtt gccgctggtc gaggtcccgc
    14221 tgggcccgat gccttcgaac agcagctacg aggccgcgtt cgcggctggg ctggcgcagg
    14281 tacgcacgtc ccatcccacg gtgagcacga tagccttcgg cgacctcttt ctcgaggatg
    14341 tgcgtgctta tcgggaagca ttgctgggtc gactcggctg gaccgggctt tatcccctct
    14401 ggcgcgagcc gaccaggccg ctggccgagt acttcatcag ccgcgggtat cgggcagtcc
    14461 tgacctgtgt cgacacgact caactggacg cgagcttcgc gggacgaacc ttcgactcac
    14521 agctcctctc ggacctccct ccagcggtgg atccctgcgg cgagcggggc gaattccata
    14581 cctgtgtcta cgccgggccg gtgttccacc agccgatcgc ggtccggacc ggcgagcagg
    14641 tgttgcggga ggagcggttc cagttctgtg acctgctcga ggacctgtaa ccgcgctcct
    14701 tacagaagaa aaaacaggaa acagccccag ttgttgccgg cctgagccgt tagcagccag
    14761 tatccgggtg acggcagacg aaagccggtt gcgaaaaaca ggggcccgtt cggtaggccc
    14821 cgcgccagag ttgacttggt aaacccgtcc gcaggtccgg ctgaatcgag ccgcaccgct
    14881 tccagagtga aattgagctc ggtgctctgg gtcgttccgg gaggaagcgt tactggagta
    14941 aaccacattt tcccgtaacc ctgatgccac acggccgcat aaagatcgaa cggacccgag
    15001 atgaattccc ccgatcgcac cgcatttgcc gtcgcgacaa cgcatcgccg gtctcgtgtt
    15061 cccgggaaat cgcgctcgtc atccggctgc ctcatgtctg acgaggatgg acgcggatgc
    15121 ctggcaccac gctgctgggc ggcctcgatc tggtggagcg agggaacagc cgtctgagca
    15181 ggacgaccct gctggccgga tacctccgct ggaagaagaa ggagcagtag tagaagctgc
    15241 cgcatgaacc ctcgagcaat ccgatctgag cgtggctcca acggtatgcc acacgactct
    15301 ctactgcgtc aagctggtgt aacagcacgg catcacgtga caagggccac cccaagagca
    15361 gaaacacagc gcccccggtc ggcagaccga gggcggcaag gaaccctgct gggctaatga
    15421 cgtctagacg aatggctcgc ggagtgcagc actcccgcaa cgatcaggtt ctttccagcg
    15481 atttctcgaa cactgctcga ttcgcggcca accgccttgc cggtctcacg cgcgagttgc
    15541 attatcgaaa tgtacccgcc cctctccagg agcctgttat gggagttctg cggaatgccc
    15601 gcggcgccgc agctttcgcc atcatcacga ttggtgcgac gttctggtcc ggctgctccg
    15661 accaagtcac gggtccgctc cccgttccat ccgccagcct gcaagcgacc agtcccggcc
    15721 cgcaggacgt ttcggccgcc atcgcggcgc aggagcgcca caccccggca ctgcggcgga
    15781 ttccgggtgt gataggaaca gcggtcgggc tcgcttcgga cgggcgggcg gtggtccgga
    15841 tcttcctgtc gcggccggac gtccccgggg tgccggatgc cctggacggc attcccgtct
    15901 cccggaccat caccggcatg ctggtggcgt tcggcaaccc caccacgaaa gcccggccag
    15961 cgccattggg ctactccatc ggacatccca gcatcacagc gggcaccatc ggcgcgctgg
    16021 tgaggaacgg ctcgggtcag acgttcgtcc tgagcaataa tcacgtcctg gccaacggca
    16081 atgatgccag cctgggcgat ccggccctcc aacccgggcc attcgacggc ggtaccctcg
    16141 ccgaccagat cggcacgctc ttcgccttca aaacgattga cttcgccctc aacggccgca
    16201 acaccatcga cgccgccctc gccctcacca gcgaggtaag caattccacg cccctggacg
    16261 acggctatgg cacacccggg agcagcatat accacgacac gaacgacgac ggcctgttcg
    16321 ataacctggc cggtctgctc aacacgccgg tccagaagta cggacgaacc accaagctca
    16381 ccaagggcac catcaccggg atcaacgcct cgctgacgat ctgctacgag gtggtgatca
    16441 tcttctgtgt caagtcggcc aacttcgtcg accagctgat catcgaaccg ggcacgttca
    16501 gcggcggcgg cgattccggt tcgctgatcg tcaccgatga tctgggcaag aacccggtcg
    16561 ggctcctgtt cgccggcagc tctactcaga ccatcgcgaa ccggatcgac ctggtgctca
    16621 accatttcgg ggtggcggtg gatggcggga gcgcgccgcc cccgaccccg accaccgacg
    16681 cggcggtgac gaccgtgacc gcgccgagct cggtaagcca gggaaccacg gtgaacgtcg
    16741 cggtggtggt gatgaacgtg gggaccgagc ccatcagtac accgttcaac gtgacgctgc
    16801 aagacgcgac cgacggcgtc ccgctcggca cccagagtgt cgccagcctg gccgcgggag
    16861 ccgtggccaa cctctccttc agctggaaca cgaccggtgc ttcattgggt gaccataccc
    16921 tgaccgccag ccacagcctc gccgacgaca acggcgcgaa caaccagcgg tcagccgtga
    16981 gcacggtgaa cgcggctggc ggcaacgggt ccatgcacat cggggacctg gacggaatca
    17041 gctcgaatga cggcaccact tggtcggcga tcgtggaaat cacggtccac gacgcgaacc
    17101 acgccccgct caacggggcg acgatcgtag gcagctggag ccggaacggc ctgaacgcca
    17161 acacctgtac cagcggcgac ctggggggga tcgggacctg catcgtgctg ttcccgtcgc
    17221 tcagccggaa gtcggtgaag tcggtgacgt tcacggtgaa cagcgtgacc atggcgggac
    17281 ggagctacgt ggcgaccagc aaccacgacg tggacggcgg cagcaacggg acttcgatca
    17341 agctgaatcg gccgtagtag cgacacgacc tcgccggttc tcccgtaggg attccatctc
    17401 ctctctcggg ataccgatga agcgccggtt ggtttgctat gccctggccg tggtcctgag
    17461 cagcagcggg cagcccagca acgctcagga acccaccggc ttggccgcgt ccgcgctggg
    17521 aaatccggcc ttcacctggc tccgccgctc ggtcccgggc tttcgggtct acatcctcgc
    17581 cgacagctac cccgcccggt accaggacag cctgctggca cggctacctt cggccgcccg
    17641 gcacgccgaa gcgatgctcc agatagaacc gctggcccag ccgatcgacc tgttcttcat
    17701 cgagtcccgg gaacagatga cccagctgat cggggcgcgc gcgaccggct tcgcgcagcc
    17761 gtcggcccgg gccgtgttcc tcgtcaccaa cccgacctgg cgggcgttcg agcggcacga
    17821 gatcatgcac gtgatcgccg gtcaggcctg gggccggccc gggccgaata ccgactggct
    17881 ggtggaggga ctcgcccagg ccgcagacgg tcgctgcggg agcttcacca acgctgacgt
    17941 tctcctggcc ctcgcgaccc gtcgcgggtg gatcccgttc cccacggtgt tgaccgagtt
    18001 ccggaaccaa ccagacctca gagcctacct ccaggctgcg gctttcgtcg accaactgct
    18061 cggccgcttc ggccccaccc ccctcaaaga actgtggacc cgcggtgctg cggttgattc
    18121 ggtgttaggt gggatgacgc tcatggcgat cgaggaggaa tggcgcgcgg aactgcgcga
    18181 gacggctcga ctgagcgacg gggagctcgc cgcaatcgaa accaagggct gcggctagcc
    18241 ggtcatcggc ggtccaacgc gcgatattgg atcgcttccg ccacatgaac tgcttcgagg
    18301 tctgtcgcct ccgacaagtc cgcaatggtc cgcgcgattt tcagcacccg gtgataggcc
    18361 cgggccgaga gcgccagccg cgacatcgcg gtccgtaaga gcccttcggc ctcgggattg
    18421 agccggcaat ggtgccggat gtcacgggcc gacatgtgcg cgttggcgcg caccgaggag
    18481 cgg
//
LOCUS       DASWKS010000186        16450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1568971, whole genome shotgun sequence.
ACCESSION   DASWKS010000186 DASWKS010000000
VERSION     DASWKS010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568971"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VGA78_05505"
     CDS             complement(<1..490)
                     /locus_tag="VGA78_05505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX9893357.1"
                     /translation="MNLHEYQARSLLTAAGIPMLDGDVATTPAEAEAITRRIGGTVVI
                     KAQVHAGGRGKAGGVKLARTPAEAFDHASRILGMSIKGFTVSRVLVVPAADIATEAYV
                     GMIIDRESQRPVLMVSPAGGIDIEEVAAKTPEKIFRLAIDPRYGLLPHQALGLGFKLY
                     PGF"
     gene            complement(734..3124)
                     /locus_tag="VGA78_05510"
     CDS             complement(734..3124)
                     /locus_tag="VGA78_05510"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX9893358.1"
                     /translation="MTSRGRRVAAALVLIAALLFMGRWLALFLADRWWAASVSPPAGI
                     LLTRRALLQLGLDLAGVVLSVLWFATHAQVILGAIRAVPLRERGGNARFRALLDKPDA
                     RPVALLGALGLGLLMGSGTAEWADAVTLAGQDITIGLTDPALGQDAGWYLSRLPLWLR
                     VQAFATVLVLLTFGLVLLAYLLGGALRIVRRLSISDEARVHLGILLALLACVIGTSQI
                     LAPFELAAGLPVPVASGIVELHRSVAFVLVGVSVAVAVLSIIWALRPLHSLVAGAWLA
                     FSAALVGAFYLLPDTPPESDPDARALRHQFERAAFGLMAEPRSRRGSRPVPAFWDATI
                     AARVARGDTVRATVAARGRLRGAGGDRPVWAALATLSDSVPVFLLADDTTGPGGTPLT
                     WRRGGLVPEAGVQPAMRLGPQAVRPGAPSVVIGAGPGVLAGGLLRRLLLTWARQTPGI
                     IGAGSSQRIGWLLEPDARLYHLAPFAVWRDVRPWIEGERLQWIVDGYVTAEAFPVVRR
                     TTWRGSPIGYLRAGFVGVVDGETGATKVYLRPGADPLARALAAAAAPLVLPAEQLPAA
                     VAQVMEYPEALLEVQAEFYSIDRALAIGDTTSSGKAPAGPRVVVGAQPGSQVAPIVDR
                     RTGRVDLLLEGGRAGDRDQLWEYLPDTTSAPEAPEVLARRWQRFSLFQQIRDSVTAGG
                     GAFETGAVRYAVTEEGLVAYQPVWALDQRGRASVVLVTVASGDRLGAGRTLDEAWRSS
                     SGELGSSLRLSDDSAARTEALRWLREADSALRRGDLVGFGRAFAALKSVLEREEPR"
     gene            complement(3129..4499)
                     /locus_tag="VGA78_05515"
     CDS             complement(3129..4499)
                     /locus_tag="VGA78_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX9893359.1"
                     /translation="MQAPRTIFRQYDVRGVIDVELTPALARALGRAFASAAWNRLGRE
                     PRIAVGRDNRPSGRALAAGVRQGIADAGGTAFDVGELPTPALYFAVHHLGTDAGLQVT
                     GSHNPPQFNGFKMVLAGEAVHGDQILALHDVITSESWRSGSGTQAAAPGILEAYRKAI
                     VERHHLARPVTVVVDCGNGVSSLVAVSTLEQCGAKVTPLFAESDGNFPNHHPDPTVPE
                     NLVDLQRAVAETRAELGIAFDGDGDRIGAVDEHGKIIWGDQLLILFGRDAVLRYGAGV
                     PVIFDVKCSELLPQALEKAGARPVMWKTGHSLIKAKMKELHSPMAGEMSGHMFFGGDW
                     FGFDDALFAAARLLELVSRDGGGLSRLLADLPETFTTPEIRVDCPEEVKFDLVERAAA
                     HFGSLYRVNTIDGVRIGFPDGWGLLRASNTQPVLVLRFEATSPESLQRYRTEVTSWLA
                     GQGVRA"
     gene            complement(4512..6020)
                     /locus_tag="VGA78_05520"
     CDS             complement(4512..6020)
                     /locus_tag="VGA78_05520"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEX9893360.1"
                     /translation="MNLTINLASPIGVSLALLPEILLCLAGLVTLLVSAWRHRSGSDI
                     RLVGWLSAAGVVAAATSLGWLWINRARPTTIPISVALDDFRFAASGLILVATFGTILL
                     SMYYLVREDLLWPEFFPLVLFGAAGMLWLAGADDMMVLFLGLEVMSVAVYVLAGFARQ
                     SKLSGEAALKYFLIGAFASAFLLYGIALTYGATGTTSMTAAGAALGRGPLPLMATLGL
                     GLFLIGFGFKVAAVPFHMWTPDVYEGAPTPVTGFMATGVKVAAFAALARVLFVMYGAS
                     PGVWVPVLSGLAVASMIVGNLVALNQRSLKRMLAYSSIAHAGYLLASLVPGTSNGAAA
                     TLTYLLAYSLTSLAAFGLLAALGRGGEQDVTLDTLAGLASRRPWVAAGLAVSMLSLLG
                     FPGTLGFIGKWQILLALLGQEHYVVSVVLVLTSLVSAGYYLPVIMTTYMRTAEGESGV
                     YPMPAAAAFTVLVACVVVVVLGFWPTPALDASLNSAASLFHASLAGVRAGGP"
     gene            complement(6017..7573)
                     /locus_tag="VGA78_05525"
     CDS             complement(6017..7573)
                     /locus_tag="VGA78_05525"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX9893361.1"
                     /translation="MSAFLASIGYGQWILHLLLGLPLLGAVLVALAGERAAKYVALLV
                     AGIELVLSLGLWWAVDTSAGTLQMVSRMPWLPRWGIAYAVGIDGISLFMVLLSTTLTA
                     LSVLASWHYIETKTRGFYALLLVLLTGMLGVFLALDLFLFYVFWEIMLIPMYFIIGIW
                     GGGNRLYAAIKFFIFTMVGSLLMLVAILAMVWTVGKATGTYDFGYDFLLRHRELFTPF
                     APWLFGAFALAFAIKVPIFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFAVP
                     FFPGTALSETVSTIVVVLAVTGIVYGALVAMVQPDIKKLVAYSSVSHLGFVMLGIWAG
                     TLQSVQGALMVMIGHGLSTGALFFLVGMLYERRHTREIASFGGIARVVPVFSAVFTVV
                     ALSSIGLPGLNGFVGEFLVLLGSYSPYPVATIIATTGVIFAAAYLLWALQRIIYQRLD
                     RPENEAITDLNLRELVVLVPLLAGIVWMGLYPRPVLDRMEPAARKYLELAQPEAVPSS
                     GGEIRLGGGR"
     gene            complement(7578..9560)
                     /gene="nuoL"
                     /locus_tag="VGA78_05530"
     CDS             complement(7578..9560)
                     /gene="nuoL"
                     /locus_tag="VGA78_05530"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX9893362.1"
                     /translation="MPSIHGWIWLTVALPLLGFLVNGLLALRRAEAKTTVSLVGAGTV
                     LGAFVVALAAFLEAARYPLHEAVIVPLWSWIPAGDLQINLAFQVDPLSLVMLLVVTGV
                     GSLIHLFSIGYMRSDPGYPRYFAYLNLFIVFMLVLVLGSSLPVLFIGWEGVGLCSYLL
                     IGFWYQDKSNADAGKKAFIVNRIGDFGALVAMFLLWQALGTLSFTEIAEKAPEVLQAG
                     GLTVTAITLFLFLGCTGKSAQIPLYTWLPDAMAGPTPVSALIHAATMVTAGVYLVVRT
                     NVLFAMAPVSQTVVAGIGALTALFAATIGLRQYDIKRVLAYSTVSQLGYMFLAVGTGA
                     YVAGIFHLVTHAFFKALLFLGSGSVIHAMHHAYHATHSHEDAQDLRNMGGLRRYLPWT
                     FGLMAIATLAIAGIPPFAGFFSKDEILAFAWGRGEHDPAWKVFWAMGTLAALMTAFYM
                     ARLMAMTFLGENRTGVKEREQLHEAPWIMTGPLLVVGVLSLIGGVLNLPAFWPTPPHH
                     GLDHWLEPVVAPGARFLPVELPHGSTEYLLIGLAVLIGAAGLIWGVRSTLARVIPTAR
                     AAPEERGLWKVINRKWYIDELYDEFIVRPLVRLSRVVLWRVVDQKLIDGAGANGSAWL
                     SRRLGWVGSKLQTGEVGIYIVMFLIGAAWILHAVSR"
     gene            complement(9560..9856)
                     /gene="nuoK"
                     /locus_tag="VGA78_05535"
     CDS             complement(9560..9856)
                     /gene="nuoK"
                     /locus_tag="VGA78_05535"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX9893363.1"
                     /translation="MLLSQSLLLSAILFGLGVLGVIMRRNAIVLFMCVELMLNAVNLT
                     LVALSQYHGLSGQVMVFFVMTVAAAEAAVGLAIILAVFRHHQSVDLKDINLLRG"
     gene            complement(9856..10416)
                     /locus_tag="VGA78_05540"
     CDS             complement(9856..10416)
                     /locus_tag="VGA78_05540"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX9893364.1"
                     /translation="MAAELAFYILAGGAVISALGCITQRNPVASAVWLVGTLFALAGI
                     YILLNAQFIGIIQILVYAGAIMVLFLFVIMLLNLAHRQNDIRRWPMWLVGVGLLAAFG
                     GPLLGLRGYSPGRLAAEVTGAAVYGDPARALPAGQAALKATQERGVVGAIADPLFRSY
                     LVPFEITSILLLVAAVGAVVIAKRKL"
     gene            complement(10416..10922)
                     /locus_tag="VGA78_05545"
     CDS             complement(10416..10922)
                     /locus_tag="VGA78_05545"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HEX9893365.1"
                     /translation="MAIGVKVMKRPEREVSYVRATLKGMALTFRHMFRPTVTMQYPEE
                     KSSPAWSISSRMRGTHRMLADEQGRSKCVACGLCPQICPANCIKLVPGEDEQGNRYPL
                     IYEIDEFRCIFCGYCQEVCPEEAIHVGVHYENSEYSRDRFVYDLERLMSQTHQVSTLW
                     DPSDPRGE"
     gene            complement(10922..12136)
                     /gene="nuoH"
                     /locus_tag="VGA78_05550"
     CDS             complement(10922..12136)
                     /gene="nuoH"
                     /locus_tag="VGA78_05550"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEX9893366.1"
                     /translation="MTPELRGFLLVTVIKLLLIFTATMVGVAYMTLMERWVSAWMQDR
                     IGPNRVGPKGILQPVADGIKNLIKEETLPRHVNRVMFILAPALAFIPALLMSGVIPWA
                     APLPLRFDFSLGPLGRFAHDGLMPVQVADLPVGFLFILAIGSIGVYGIALAGWASNNK
                     YSLLGGLRSSAQMVSYEIPMGMSLIPVLLLAGNVRFAEIIQAQQTGLWYVLPLFLSFF
                     VFAVAGFAETNRAPFDLPEAESELVAGYHTEYSAFKFSMFFIAEYANVMTFNAMIATL
                     FFGGWDLPFTHWDETPGLAQTLVTGLVMFLKVSFGIFVVMWVRWTLPRFRFDQLMAAG
                     WKFLLPVALAYIMIMTVAIWAVDTLLPGQSVAMRQLVLFGLNLILAWITFILADRGFI
                     MAGSYRTSGGVI"
     gene            complement(12133..13704)
                     /locus_tag="VGA78_05555"
     CDS             complement(12133..13704)
                     /locus_tag="VGA78_05555"
                     /inference="COORDINATES: protein motif:HMM:NF024900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX9893367.1"
                     /translation="MTQELVSLTIDGTAIAVPKGTALIEAAKQAGVLIPHYCYHPSLS
                     APAVCRMCLVDVEKSPKVVPACVTAVAEGQVVHTQSQKAKDAREAVLEFLLINHPLDC
                     PICDQAGECELQDFVFQEGRSGTRYADYPKRYSPVEDFGPDILYVPNRCILCTRCVRF
                     MDEMAEAPVIEVFDRGDRAYIGITPGQALEHEWAGNVVDLCPVGSLISKDFLHKARAW
                     DLDKTAGICTGCSQGCNIMIDTRDDVVVRLRPRPNLDVNRHFMCDTGRMQYRWMNRGD
                     RVDAPLVRHHGRLQAADWDASLARLAELVREARGRIVVLASGRASTESLGWVMRLLEG
                     REVMAAVKVPTGSEAPLPGIPNLALRRERAPNGDGARLAGYLADWGSAVSAAADAALT
                     LVLDAELDDAEAARAGQSRVLVCLTTVDDERFAAAELVLPVTTVAEENGTFVNRDARV
                     QRFRQARGGPGMARPAWWVAAGAWEQLAAGNAAPETAAEAFERLGETIPALSGLGYDN
                     LGLTGRVIEPAGARA"
     gene            complement(13731..15038)
                     /gene="nuoF"
                     /locus_tag="VGA78_05560"
     CDS             complement(13731..15038)
                     /gene="nuoF"
                     /locus_tag="VGA78_05560"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEX9893368.1"
                     /translation="MGYPHPSHPRETVVLSQYFGDEGARSYDGWVRRGGYEALKKALG
                     MTPDAIIEEVKASGLRGRGGAGFPTGLKWSFMPKNSGKPHYLCCNADESEPGTFKDRE
                     IMRWTPHGLIEGCAIAAYAIGAERTYIYIRGEFTEPWRIMERAVAEAYASGALGDNAF
                     GSGKRSDMVLHRGAGAYICGEETALMNSIEGKRGNPRIKPPFPAAAGLFGMPTTINNV
                     ETLAAVPHILTRGAAWYKALCLGNPKSTGTKLFSVCGHVMRPGNYELTMGFPMKDLIH
                     DLAGGMRPGRRLRAVIPGGSSVPIMTAEEAESALCDYEGIVEKGSMLGSAGFIVIDDS
                     ADLVYEIYRLARFYAHESCAQCTNCREGTAWTVKILERLLKGEGKPTDLDLLLDLSEN
                     MTGKTICVLSDSCAAPIVSGIGKFPGDFQKYLAGARSPALAGV"
     gene            complement(15070..15570)
                     /locus_tag="VGA78_05565"
     CDS             complement(15070..15570)
                     /locus_tag="VGA78_05565"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEX9893369.1"
                     /translation="MSAHAIAAHEPVFVGKARQKLEALFPQYPTRQACLLPALWIVME
                     ERGWISPQAMAEVGELLGLTPAYVKGVVTFYTMYYQHPMGRHVIQVCTTTPCHLCGAG
                     DVMQSLLKHTGCGELGTTSSDGRFTVVEVECLGACGFPTPLLIDDDFIESVTPETVPG
                     ILERYA"
     gene            complement(15567..>16450)
                     /locus_tag="VGA78_05570"
     CDS             complement(15567..>16450)
                     /locus_tag="VGA78_05570"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683148.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX9893370.1"
                     /translation="ACEMSRIISHLVWLGTTAIDLGAYTPFLWTFQERERVYNLQEAW
                     TGARLTTSMTRVGGLMADIPEGWDRGLREFCRTFPNTLNEVDTMFTRNAIWCGRTQGV
                     GALSGEEAINWSLSGPMLRASGVDYDVRKDRPYLGYETYDFDVPVGEHGDIYDRYRVR
                     MEEMYQSVRILEQASDRLDQLRGAPINVDDPRVILPPKRRAMSDMEAMIFHFKQVMEG
                     VQAPPGEAYLGIENPKGELGYYFVSDGTAKPVRWRIRPPSFINLSVLPKLCEGVLLSD
                     VIAINASVDIVMGEVDR"
BASE COUNT         2960 a         5730 c         5429 g         2331 t
ORIGIN      
        1 gaaacccggg atagagcttg aaccccaggc ctaacgcctg atggggcagc agcccgtagc
       61 gggggtcgat cgccaaccgg aagatcttct ccggcgtctt ggccgcgacc tcttcgatgt
      121 cgatccctcc cgcggggctc accatgagca ccggccgctg gctctcccgg tcgatgatca
      181 tgcccacata cgcctcggtg gcgatgtccg cggccggcac caccagaacc cgggacaccg
      241 taaaaccctt gatgctcatg ccgaggatgc ggctggcatg gtcgaaggcc tcggccggtg
      301 tccgggccag tttgacgccg ccggctttgc cccggccgcc cgcatgcacc tgcgccttga
      361 tgaccacggt gcccccgatc cggcgcgtga tcgcctcggc ctcggccggc gtggtggcga
      421 cgtcgccatc gagcatggga atcccggccg ccgtgagcag ggaacgggct tggtactcgt
      481 gcagattcat cgggtggttc ctcgttccgg gttccaagtt ccacgggcgg tgctaggtgc
      541 ggtgccaggt gccacgggtc gagtgcttga cctgacccaa cgcttgtcat cctgggggca
      601 gcgctgtcat cctgagcgca gcgaaggatc tcgcctggca ccgggcactc agcaccgcac
      661 ctagcaccgc acgcggcacc cggaacttgg aacccggaac ccaagacaaa gcccccaaaa
      721 taaccacccc cgctcagcgg ggctcttcgc gctccagcac cgacttgagg gctgcgaacg
      781 cgcggccgaa accgaccaga tcaccccgcc gcaacgccga gtcggcttcc cgcaaccagc
      841 ggagggcttc ggtgcgggcg gcgctgtcgt cgctcagccg gagcgagctg cccagctcgc
      901 cgctggagct gcgccaggct tcgtccaggg tgcggccggc cccgagccgg tctccgctcg
      961 caaccgtcac cagcaccacc gaggctcggc ctcgctggtc gagggcccag accggctggt
     1021 acgccaccag cccctcttca gtgacggcgt agcgcaccgc tccggtctcg aacgcgcctc
     1081 cgcccgccgt caccgaatcc cggatctgct gaaacagcga gaatcgctgc caccgccgcg
     1141 ccagcacctc gggcgcttcg ggtgcggagg tggtgtccgg cagatactcc cacagctggt
     1201 cccgatcgcc ggcccgcccg ccttcgagca gcaagtcgac ccgcccggtc cgccgatcga
     1261 caatgggcgc gacctggctg ccgggctggg cccccaccac cacgcggggg ccggctggcg
     1321 ctttgccgct cgatgtggta tcgccgatgg ccagggcccg gtcgatgctg taaaactccg
     1381 cctggacctc cagcagggcc tcggggtatt ccatgacctg cgccactgcg gccggcagct
     1441 gctcggccgg cagcaccagg ggcgccgccg ccgcggccag cgcgcgcgcc agcggatcgg
     1501 ccccggggcg gaggtacact ttcgtcgcgc cggtttcccc atcgaccaca ccgacgaacc
     1561 ctgctcgcag gtacccgatc gggctgcccc tccaggtggt gcgccgcacg accggaaacg
     1621 cctcggccgt gacgtaaccg tcgacgatcc actgcaaccg ctcgccttcg atccagggac
     1681 gcacgtcgcg ccatacggcg aagggcgcca ggtggtacag tcgcgcgtcc ggctcgagca
     1741 accagccgat ccgctggctg gagccggcgc cgataatgcc gggcgtctgc cgggcccagg
     1801 tgagcaagag ccggcgaagc agaccgccgg ccagtactcc aggaccggct cctatgacca
     1861 ccgacggtgc gcccgggcgg acggcctgag gccccagccg catcgccggt tggaccccgg
     1921 cctccgggac cagcccgccc cggcgccagg tcagcggcgt gccgcccggt ccggtggtgt
     1981 cgtcggccag caggaatacc ggcaccgaat cgctcagagt ggcaagcgcc gcccacaccg
     2041 gtcggtcccc acccgctccc cggagccggc ctcgcgccgc caccgtggct cggacggtat
     2101 cgccccgggc gacccgggcc gcgatggtcg cgtcccagaa ggccgggacc ggacgactgc
     2161 cccgacggga cctcggctcc gccatcaggc cgaacgccgc ccgttcgaat tgatgccgca
     2221 gcgcccgcgc gtcgggatcc gactcgggag gagtatcggg caggagatag aaggcgccga
     2281 ccagcgcggc actgaatgcc agccaggcgc ctgccaccag gctgtgcaac ggacgcaagg
     2341 cccaaatgat ggagaggacc gccaccgcca cactcacgcc caccagcacg aaggccaccg
     2401 atcggtgcag ttcgacgatg ccgctcgcca ccggcaccgg caaaccggcc gcgagctcga
     2461 agggggccag gatctggctg gtgccgatga cgcaggcgag cagggccagc agaattccca
     2521 ggtgcacccg ggcttcatcg ctgattgaga gcctgcgcac gatgcgcagc gcgcccccga
     2581 gcagatatgc cagcagaacc agaccgaagg tgagcagcac cagcacggtg gcgaacgcct
     2641 ggactcgaag ccagagtggc aagcggctca ggtaccaccc ggcgtcctgt cccagggccg
     2701 gatcggtgag gccgatggtg atgtcctgcc cggccagcgt gacggcatcg gcccactcgg
     2761 cggtcccgct tcccatgaga agcccgaggc ccaaggcacc cagcagcgcc acggggcggg
     2821 catccggctt gtccagcagc gcccggaagc gggcgttgcc gccgcgctcc cggagcggca
     2881 ccgcgcggat ggccccaagg atcacctggg catgggtggc gaaccacagc accgagagta
     2941 ctacgccggc cagatcgaga cccaattgaa gcagcgcgcg acgggtgagc agaataccgg
     3001 cgggaggaga gacgctggcc gcccaccacc ggtccgccag gaacagcgcg agccaccggc
     3061 ccatgaagag cagcgcggcg atgagcacca gggccgcggc gacccggcga ccgcgggatg
     3121 tcatggaatc aggcgcggac gccctgcccg gcgagccagg aggtcacttc ggtgcgatag
     3181 cgttggagac tctcggggct ggtggcttcg aagcgaagca ccagaacagg ctgcgtattg
     3241 gaggcgcgga gcaatcccca tccgtcgggg aatccgattc gaacgccgtc gatggtgttc
     3301 acccggtaaa gcgacccgaa gtgcgcggcg gcccgttcga ccaggtcgaa cttgacctcc
     3361 tcgggacagt ccacccggat ctccggcgtg gtgaaggttt ccggcagatc ggccaggagc
     3421 cgggacagtc cgcctccgtc gcgcgagacc agctccagca ggcgggcggc ggcgaagagc
     3481 gcatcgtcga agccgaacca atcgccgccg aagaacatgt ggccgctcat ctcgcccgcc
     3541 atgggcgaat gcagctcctt catcttggcc ttgatgagcg agtggccggt cttccacatc
     3601 accggccggg cccccgcttt ctccagcgcc tggggcaaca gctcggagca cttgacgtcg
     3661 aagatcaccg gcacgccggc cccgtagcgc agcactgcgt cgcggccgaa gagaatcagc
     3721 agctggtcgc cccagatgat cttgccgtgc tcatccaccg ccccgatccg gtcgccgtcg
     3781 ccgtcgaacg cgatgcccag ctcggctcgg gtctcggcca cggcccgctg cagatcgacc
     3841 aggttttccg gcacggtggg atcgggatgg tgattgggaa agttgccatc ggactcggcg
     3901 aagaggggcg tcaccttcgc cccgcactgc tccagcgtgc tcaccgccac cagactggac
     3961 accccgttgc cgcagtcgac cacgacggtc acggggcggg ccagatggtg gcgctccacg
     4021 atcgccttgc ggtacgcctc cagaatccct ggtgccgcgg cctgggtccc cgagcccgaa
     4081 cgccagcttt cgctggtgat cacgtcgtgc agggccagga tctgatcgcc gtgtacggct
     4141 tcgcccgcca gcaccatctt gaagccgttg aactgggggg gattgtggga ccccgtgact
     4201 tgaagcccgg catcggttcc gagatggtgc accgcgaaat agagcgccgg cgtcggcagc
     4261 tcgcccacgt cgaacgcggt tccgccggcg tccgcgatgc cctgccgcac gccggcagcg
     4321 agcgcgcggc ccgagggccg gttgtcccgc ccgaccgcga tccggggctc acgtcccagc
     4381 cggttccagg cggcgctggc gaaggcccgg cccagggcac gggccagcgc cggtgtcagc
     4441 tcgacgtcga tgacgccgcg gacgtcgtat tgccggaaga tggtgcgcgg ggcttgcatc
     4501 ggcgccgccg ttcagggacc gccggcgcga acgccagcca gggaagcatg gaacagcgac
     4561 gcggcgctgt tgagtgaggc gtcgagcgcg ggcgtgggcc agaacccgag gaccaccacc
     4621 acgacgcacg ccaccagcac ggtgaaggcg gccgcggccg gcatgggata cactcccgat
     4681 tcgccctcgg cagtccgcat gtacgtcgtc ataatcacgg gcagatagta gcccgcggat
     4741 accaggctgg tcagcaccag caccacggag accacatagt gctcctgtcc cagcagcgcg
     4801 agcaggatct gccacttgcc gatgaagccc agggtaccgg ggaagccaag cagtgagagc
     4861 atcgagaccg ccagaccggc cgcgacccag ggccgccgtg acgccagccc ggcaagggta
     4921 tcgagggtga catcctgctc cccaccgcgt cccagggcag ccagcaggcc gaatgccgcc
     4981 aacgaggtca gggaatacgc cagcaggtac gtgagggtgg cggccgcgcc gttgctggta
     5041 ccgggcacca gcgacgccag caggtagccg gcgtgcgcga tggagctgta ggccagcatg
     5101 cgcttgagcg atcgctggtt caaggccacc aggttcccca cgatcatcga ggcgaccgcg
     5161 aggcccgaca gcaccgggac ccagacgccg ggggacgcac catacatcac aaagagcacc
     5221 cgggccagcg cggcgaaggc ggccaccttg accccggtgg ccatgaatcc ggtcaccggc
     5281 gtcggggccc cttcgtacac gtcgggggtc cacatgtgaa agggaaccgc cgccaccttg
     5341 aacccgaagc cgatcagaaa cagtcccagc cccagcgtcg ccatcagcgg cagtgggccc
     5401 cgccccagcg ccgcgccggc cgcggtcatg ctggtggtac cggtcgcgcc gtaggtcagc
     5461 gcgatgccgt acagcaggaa cgccgaggcg aaggctccga tcaggaagta cttgagcgcg
     5521 gcctccccgg acagcttgct ctgccgcgca aatcccgcca ggacgtagac ggccaccgac
     5581 atgacctcaa gccccaggaa gagcaccatc atgtcatcgg ccccggccag ccacagcatg
     5641 ccggcggcgc cgaacagcac cagcgggaag aactcgggcc agagcaggtc ttcgcgcacc
     5701 agatagtaca tggagagcaa gatggtgccg aaggtcgcca ccagaatgag tccgctggcg
     5761 gcgaaccgga aatcatccag cgccacgctg atcggtatgg tggtggggcg ggcccggttg
     5821 atccagagcc agccgaggct ggtcgccgcg gcgaccacgc cggcggcgga cagccaaccg
     5881 accagccgga tgtcgctccc ggagcggtgg cgccaggccg acaccagcag cgtcaccagc
     5941 ccggccagac acagcaggat ctccggcagg agggccagcg agactccgat gggcgaggcc
     6001 aggttgatcg tcaggttcat cggccgcccc ccagtcggat ctcgcccccg ctgcttggca
     6061 ccgcctcggg ctgggccagc tccagatatt tgcgggcggc cggttccatc cggtcgagca
     6121 ccggccgcgg gtacagcccc atccacacga ttcccgccag caggggcacc agcaccacca
     6181 gctcgcggag attgagatcg gtgatcgcct cgttctcggg ccgatccagc cgctgataga
     6241 tgatccgttg cagggcccac agcaggtagg cggcggcgaa gatcacgccg gtcgtcgcga
     6301 tgatggtggc caccggatag gggctgtagc tgccgaggag aaccaggaac tcacccacga
     6361 aaccgttgag gccgggcaac ccgatggagg agagcgccac gacggtgaat acggcgctga
     6421 agaccggaac cacccgagcg atgccgccga aggacgcgat ctcgcgagta tggcgccgct
     6481 cgtagagcat gcccaccaga aagaacagcg caccggtcga gagcccgtgc ccgatcatca
     6541 ccatcagggc gccctgtacg ctctggaggg tgccggccca gatgccgagc atcacgaagc
     6601 ccaggtggga aacggacgaa taggccacca gcttcttgat gtccggctgc accatcgcca
     6661 ccagcgcccc gtacacgatg ccggtcacgg ccaggaccac cacgatggtc gagaccgtct
     6721 ccgagagcgc cgtgccggga aagaacggga cggcgaagcg gaggaagccg taggtcccca
     6781 tcttgagcag cacgccggcc aggatcaccg agcccgcggt cggggcttcg acgtgggcgt
     6841 cggggagcca ggtgtggagc gggaagatcg gcaccttgat cgcgaacgcc agcgcgaagg
     6901 ctccgaacag ccagggcgcg aacggggtga acagctcgcg gtggcggagc aggaagtcat
     6961 agccgaagtc gtaggtcccg gtggccttcc cgacggtcca caccatcgcc aggatcgcta
     7021 ccagcatcag gagcgatccc accatcgtga agatgaagaa cttgatcgcc gcgtagagcc
     7081 ggttgccgcc gccccagatc ccgatgatga agtacatcgg gatgagcatg atctcccaga
     7141 agacgtagaa caggaacaga tccagcgcca ggaacacccc cagcatcccg gtgagcagca
     7201 ccagcagcag ggcgtagaac ccgcgggtct tggtttcgat gtaatgccag ctggccagga
     7261 cggagagcgc ggtcagcgtg gtcgacagca gcaccatgaa cagggagatg ccgtcgatcc
     7321 cgaccgcgta ggcgatcccc cagcgcggca gccagggcat ccggctcacc atctgcagcg
     7381 tgccggccga ggtatccacc gcccaccaga gcccgagcga gaggaccagc tcgatgccgg
     7441 cgaccagcag cgccacgtac ttggcggccc gctcgcccgc cagggccacc agaactgcgc
     7501 ccagcagcgg caggcccagg agcaggtgca ggatccactg cccgtagccg atcgacgcga
     7561 ggaaggcgct catcaggtta ccgggacacg gcgtggagga tccaggcggc gccgatcagg
     7621 aacatcacga tgtagatccc gacctcgccg gtctgcagct tgctgcccac ccaacccagc
     7681 cggcgcgaca gccaggccga gccgttggcg ccagcgccat cgatgagctt ttgatccacc
     7741 actcgccaca gcaccacccg ggagagacgc accagcggcc gtacgatgaa ctcgtcgtac
     7801 agctcgtcga tgtaccactt ccggttgatg accttccaga gcccccgctc ctcgggagcg
     7861 gcccgggccg tgggaatgac ccgggccagc gtggacctga cgccccagat caggcccgcc
     7921 gcgccgatca ggaccgccag cccgatgagc aggtactcgg tagatccatg gggcagctcc
     7981 accggcagga accgggcgcc cggcgcgacc accggctcca gccagtgatc cagtccatgg
     8041 tggggcggcg tgggccagaa cgccggcagg ttgagcactc cgccgatcag gctcagcacg
     8101 cctaccacca ggagcgggcc ggtcatgatc cagggcgctt cgtgcagctg ctcgcgttcc
     8161 ttcacgccgg tgcggttctc ccccaggaag gtcatggcca tgagccgggc catgtagaac
     8221 gcggtcatca gcgccgccag cgtgcccatg gcccagaaga ccttccaggc cgggtcgtgc
     8281 tcgccccggc cccaggcgaa ggccaggatc tcgtccttgg agaagaaacc ggcaaagggc
     8341 ggaatgcccg cgatcgccag ggtggcgatg gccatcagcc cgaaggtcca cggcagatag
     8401 cgccggaggc ctcccatgtt ccgcaggtcc tgggcgtctt cgtgcgagtg ggtcgcgtgg
     8461 taggcgtggt gcatcgcgtg gatcacgctg cccgagccca ggaacagcag cgccttgaag
     8521 aaggcgtgcg tcaccaggtg aaagatcccg gccacgtagg cgccggttcc cacggccagg
     8581 aacatgtacc ccagctgcga caccgtcgaa tacgccagca cccgcttgat gtcgtactgc
     8641 cgcaggccga tggtcgcggc gaacagcgcg gtcagcgcgc cgatgccggc caccaccgtc
     8701 tggctcaccg gcgccatcgc gaacagcacg ttggtccgca ccaccagata gaccccggcg
     8761 gtcaccatgg tggcggcgtg gatcagggcg gacaccggcg tggggccggc catcgcgtcg
     8821 gggagccagg tgtagagcgg aatctgggcc gacttgccgg tgcagcccag gaacaggaaa
     8881 agggtgatgg cggtgaccgt gagcccgccc gcctgcaaca cctccggcgc cttctccgcg
     8941 atttcggtga agctgagcgt gcccagtgcc tgccagagca gaaacatcgc caccagcgcg
     9001 ccgaagtcac cgatccggtt gacgatgaag gccttcttcc ccgcgtcggc gttcgactta
     9061 tcctgatacc agaaaccgat cagcaggtag gagcagaggc ccaccccttc ccacccgatg
     9121 aacaacaccg gcaggctcga tcccagcacc agcaccagca tgaacacgat aaacaggttg
     9181 agataggcga agtagcgggg ataccccggg tcgctccgca tgtatccgat gctgaacagg
     9241 tggatcaggc tgccgacccc cgtcaccacc agcagcatca ccagagacag ggggtccacc
     9301 tggaacgcca ggttgatctg gagatcgccc gccgggatcc aggaccagag cgggacaatg
     9361 accgcctcgt gcagcggata ccgcgccgct tccaggaacg cggccagcgc cacgacgaag
     9421 gccccgagca cggtgccggc tcccaccagg ctgaccgtgg tcttggcctc ggcccgccgg
     9481 agcgccagca gtccgttgac caggaacccg agcagcggca gggcgacggt cagccagatc
     9541 cagccgtgga tcgatggcat cagccgcgca gcaggttgat gtccttgagg tccaccgact
     9601 ggtggtggcg gaagacggcc aggatgatcg ccaggcccac ggccgcttcg gcggcggcca
     9661 cggtcatcac gaagaagacc atcacctgtc ccgagagacc gtggtactgg gagagggcca
     9721 ccagcgtgag gttgaccgcg ttgagcatga gctcgacgca catgaacagc acgatggcgt
     9781 tgcggcgcat gatcacgccc agcacgccca ggccgaacag gatcgcggag agcagcagag
     9841 actggctgag gagcatcaga gctttcgctt ggcgatgacc acggccccga cggcggccac
     9901 gagcagcaga atggaggtga tctcgaaggg caccagatag ctgcggaaca gggggtcggc
     9961 gatggccccg accacacccc gctcttgggt cgccttgagc gccgcctggc ccgccggcag
    10021 ggcccgcgcc ggatcgccgt acaccgcggc gccggtcacc tcggcggcga gccggccggg
    10081 cgaatagccg cggagcccca gcagcggccc cccgaacgcg gccagcaggc cgacccccac
    10141 cagccacatg ggccagcggc ggatgtcgtt ctggcggtgg gccagattga gcagcatgat
    10201 gacgaagagg aacagcacca tgatggcgcc ggcatacacc aggatctgga tgatgccgat
    10261 gaactgggcg ttgagcagga tatagatccc cgccaacgcg aagagcgtcc ctaccagcca
    10321 caccgccgac gccaccgggt tgcgctgggt aatgcagccg agggcggaga tgaccgcacc
    10381 ccccgccagg atgtagaacg ccagctcggc ggccatcatt ccccgcgcgg gtccgacgga
    10441 tcccacaggg tcgaaacctg gtgagtctgc gacatcaacc gctccaggtc gtacacgaac
    10501 cggtcccggc tgtactccga gttttcgtaa tgcaccccga cgtggatcgc ttcctcgggg
    10561 cagacctcct gacagtagcc gcagaagatg cagcggaatt cgtcgatctc gtagatcagg
    10621 ggatagcgat tgccctgctc gtcttcgccc ggcaccagct tgatgcaatt ggccgggcag
    10681 atctggggac agagcccgca ggccacgcac ttggagcggc cctgctcgtc ggccagcatc
    10741 cggtgggtgc cccgcatccg cgaggagatg ctccatgccg ggctggactt ctcttccgga
    10801 tactgcatgg tcacggtggg ccggaacatg tgccggaacg tgagcgccat ccccttgagg
    10861 gtggcccgga cgtagctcac ctcccgctcg ggccgtttca tcaccttgac gccgattgcc
    10921 atcagatcac tccaccgctg gtgcgatacg atcccgccat gatgaagccc cggtcggcca
    10981 ggatgaacgt gatccaggcc aggatcaggt tcagtccgaa gagcaccagc tggcgcatcg
    11041 cgaccgactg ccccgggagc agggtatcca ccgcccagat cgccaccgtc atgatcatga
    11101 tgtacgccag ggccaccggg agcagaaact tccaccccgc ggccatcagc tggtcgaatc
    11161 ggaaccgcgg cagagtccag cggacccaca tcaccacgaa gatgccgaag ctgaccttga
    11221 ggaacatcac caggcccgtg accagggtct gagccagccc gggggtttcg tcccagtggg
    11281 tgaagggcag atcccagccg ccgaagaaga gcgtggcgat catcgcgttg aacgtcatga
    11341 cgttggcgta ttccgcgatg aagaacatcg agaacttgaa cgcgctgtac tcggtgtgat
    11401 aacccgccac cagctcggac tccgcttccg gcaggtcgaa cggcgcccgg ttggtctcgg
    11461 cgaatcccgc caccgcgaac acgaagaacg agaggaacag cggcaggacg taccacagcc
    11521 cggtctgctg ggcctggatg atctcggcga accggacgtt gcccgccagc aacaacaccg
    11581 gaatcaggct catccccatg gggatttcgt aggacaccat ctgggcgctg gagcggagcc
    11641 cgcccagcag actgtacttg ttgttggagg cccagccggc cagcgcgatc ccatacaccc
    11701 cgatggaccc gatcgccagg atgaagagga acccgaccgg caggtcggcc acctggaccg
    11761 gcatcagccc gtcgtgggcg aagcgcccca gcggtcccag cgagaaatcg aaccggagcg
    11821 gcagtggcgc ggcccaggga atcacgccgc tcatcaacag agccggaatg aacgccagcg
    11881 ccggcgccag gatgaacatc acccggttca cgtgccgggg cagcgtctct tccttgatca
    11941 ggttcttgat gccgtccgcg accggctgga ggatgccctt gggacctacc cggttgggac
    12001 caatccggtc ctgcatccag gccgagaccc atcgctccat cagggtcatg taggccacgc
    12061 ccaccatcgt ggctgtgaag atcagcagca gcttgatgac cgtgaccagc aggaaccccc
    12121 tgagctcggg cgtcacgcac gtgcccccgc cggctcgatc acccggccgg tgagccccag
    12181 gttgtcgtag ccgagcccgg acagcgcggg aatggtctcg cccagccgct cgaacgcctc
    12241 ggcggcggtt tccggggccg cgttgccggc cgccagctgc tcccaggccc cggcggcgac
    12301 ccaccaggcg ggccgagcca tcccgggtcc gccccgagcc tgcctgaacc gctgcacccg
    12361 ggcgtcccgg ttgacgaagg tgccgttctc ctccgccacg gtcgtcacgg ggagcaccag
    12421 ctcggccgcg gcgaagcgtt catcgtcgac ggtggtgagg cagaccagca cccggctctg
    12481 cccggcccgg gccgcctcgg cgtcgtccag ctcggcgtcg agcaccagcg tgagggccgc
    12541 gtcggcggcg gccgacaccg cgctgcccca gtcggccagg tatcccgcca gccgggcgcc
    12601 gtcgccgtta ggcgcgcgct cgcgacgcag ggccagattc gggatgccgg ggagcggtgc
    12661 ctcggagccg gtgggaacct tcaccgcggc catcacctcg cgaccctcga gcagccgcat
    12721 cacccatccc agcgactcgg tggaggcccg ccccgacgcc aggacgacga tccgtccccg
    12781 ggcttcgcgc accagctccg ccagccgcgc gagcgacgcg tcccagtcgg ccgcctggag
    12841 ccggccgtgg tgccgcacca gcggggcgtc cacccggtcg ccacggttca tccagcggta
    12901 ctgcatccgg ccggtatcgc acatgaaatg gcggttgaca tcgaggttgg gccggggccg
    12961 cagccgaacc accacatcgt cgcgggtgtc gatcatgatg ttgcagccct ggctgcagcc
    13021 ggtgcagatg ccggcggtct tgtccaggtc ccaggcccgt gccttgtgga ggaaatcctt
    13081 ggagatcagg gagccgaccg gacagagatc gaccacgttg ccggcccact cgtgctcgag
    13141 ggcctgaccc ggggtaatgc cgatataggc ccggtcgccc cggtcgaaca cctcgatcac
    13201 cggcgcctcg gccatttcgt ccatgaaccg cacgcagcgg gtgcagagga tgcagcggtt
    13261 cggcacgtag aggatgtcgg gcccgaagtc ttccaccggg ctgtaccgct tggggtaatc
    13321 ggcgtaccgg gtaccggagc ggccctcctg gaacacgaag tcctgcagct cgcactcgcc
    13381 ggcctggtcg cagatggggc agtcgagcgg atggttgatc agcaggaact ccaggaccgc
    13441 ttcccgggca tccttggcct tctgactctg ggtatgcacc acctggcctt cggccaccgc
    13501 ggtgacgcag gccgggacga ctttgggact cttctccaca tccaccaggc acatgcggca
    13561 caccgccggc gccgagagcg aggggtggta gcagtagtgc gggatcagca cgcccgcctg
    13621 cttggccgcc tcgatgaggg cggtcccctt ggggacggcg atggcggtgc cgtcgatggt
    13681 gaggctgacc agctcttggg tcatatcagc cgtgagtcac gagtgaccgc tcagacgccc
    13741 gcgagcgcgg gactccgagc cccggccagg tatttctgga agtctcccgg gaactttccg
    13801 atcccgctga cgatgggcgc ggcgcaggag tcgctcagga cacagatggt cttgccggtc
    13861 atgttctccg acagatccag cagcagatcg agatcggtgg gcttgccctc acccttgagc
    13921 agccgctcca ggattttcac ggtccaggcg gtgccctcgc ggcagttggt gcactgggcg
    13981 cagctttcgt gggcgtagaa ccgggccagc cggtagatct cgtacaccag gtcggccgag
    14041 tcgtcgatca cgatgaatcc ggccgagccg agcatggagc ccttctcgac gatgccctcg
    14101 tagtcgcaga gggccgactc ggcttcctcg gccgtcatga tcggcaccga cgacccgccc
    14161 gggatcaccg cccggagccg gcggccggga cgcatgccac cggccaggtc gtggatgagg
    14221 tccttcatcg ggaaccccat cgtgagctcg tagttccccg gccgcatgac gtggccgcag
    14281 accgagaaga gcttggtgcc ggtgctcttg ggattgccca ggcagagcgc cttgtaccag
    14341 gcggcgcccc gggtgaggat gtgggggact gcggccagcg tctccacgtt gttgatcgtg
    14401 gtcggcatcc cgaacagccc ggccgcggcc gggaacggcg gcttgatgcg gggattgccc
    14461 cgcttgccct cgatcgagtt catgagggcg gtctcttccc cgcagatgta tgcgccggcg
    14521 cctcggtgca gcaccatgtc gctccgcttg cccgaaccga acgcgttgtc accgagggcg
    14581 ccggacgcgt atgcctcggc caccgcccgc tccatgatcc gccagggctc ggtgaattcg
    14641 ccccggatgt agatgtaggt ccgctccgcc ccgatggcgt acgccgcgat ggcgcagcct
    14701 tcgatcagcc cgtggggagt ccagcgcatg atctcccggt ccttgaacgt gccgggctcc
    14761 gactcgtccg cgttgcagca gaggtaatga ggcttgcccg agttcttggg catgaagctc
    14821 cacttgagcc cggtcgggaa tccggccccg ccccggcccc gcaaacccga cgccttcacc
    14881 tcttcgatga tggcatccgg cgtcatcccc agcgccttct tcagcgcctc gtacccgccc
    14941 cgtcggaccc agccgtcgta cgaacgcgcc ccctcgtccc cgaagtactg ggagaggacg
    15001 acggtctctc ttgggtgtga tggatgggga tagcccactt agtcctctat ccttagccct
    15061 aaatcctgtt caggcatatc gctccagaat cccgggaacc gtctccggcg tcacgctctc
    15121 gatgaaatcg tcgtcgatca ggagcggcgt cggaaagccg caagcgccca gacactccac
    15181 ctcgacgacg gtaaaccgcc cgtcggagct ggtggtgccc agctcgccgc aaccggtgtg
    15241 cttgagcagc gattgcatca cgtccccggc gccgcagaga tgacagggcg tggtggtgca
    15301 cacctggatc acgtgccgcc ccatggggtg ctggtaatac atggtgtaga aggtcaccac
    15361 acccttcacg taggccggcg tgaggccgag cagctcgccc acttcggcca tggcctgagg
    15421 tgagatccag ccccgctctt ccatcacgat ccagagcgcg ggcaacaggc aggcttgcct
    15481 ggtggggtac tgggggaaga gcgcctcgag cttctggcgg gccttcccga cgaacaccgg
    15541 ttcgtgcgcc gcgatcgcgt gcgcgctcat cggtcgacct cccccatgac gatatcgacg
    15601 ctggcgttga tggcgatcac gtcggacagg agcacccctt cgcagagttt gggcagcacg
    15661 ctcagattga tgaaggaggg cggccggatc cgccagcgga ccggcttggc ggtcccgtcg
    15721 gacacgaaat agtagcccag ctcgcctttg ggattctcga tccccaagta ggcttccccc
    15781 ggcggcgcct ggactccctc catcacctgc ttgaaatgga agatcatcgc ttccatgtcg
    15841 ctcatcgccc gccgcttggg cggcagaatc acccgcggat cgtcgacgtt gatgggcgcg
    15901 ccccgcagct ggtcgagccg gtcggatgcc tgctccagga tccgaaccga ctggtacatc
    15961 tcctccatcc ggacccgata tcggtcgtag atgtcgccgt gctcacccac ggggacgtcg
    16021 aagtcgtagg tctcgtatcc caggtagggc cggtccttgc gcacgtcata gtcgacgccc
    16081 gaggcacgca gcatcggccc cgacagcgac cagttgatcg cttcttcccc gctcagcgcg
    16141 ccgaccccct gggtccggcc gcaccagatc gcgtttcggg tgaacatggt gtccacctcg
    16201 ttgagcgtgt tgggaaaggt ccggcagaac tcgcgcagcc cccggtccca gccttcggga
    16261 atatcggcca tcaacccgcc cacccgggtc atgctggtgg tgagccgggc cccggtccag
    16321 gcctcctgca ggttgtacac ccgctcccgc tcctggaaag tccacaggaa cggcgtgtag
    16381 gcgcccaggt cgatcgcggt ggtgccgagc cacaccagat gcgagatgat ccggctcatt
    16441 tcgcaggcga
//
LOCUS       DASWKS010000187         8741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2679299, whole genome shotgun sequence.
ACCESSION   DASWKS010000187 DASWKS010000000
VERSION     DASWKS010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8741
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2679299"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="VGA78_05575"
     CDS             <1..643
                     /locus_tag="VGA78_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893371.1"
                     /translation="IESIPGQQGTDYQYVTSLAKDVGYVFYVDPGPVPGTNTAYWGPE
                     IKTGVPQPALNVNMDAHTNVESLSFSFDGLSNTLPIVFVQNQMTKVTYPIPIPPVNPL
                     QPPLGATGLIPTKIEFLKETAKMTPMKAIMTGLAVASASSEAVKGTGTLDVLRYGRIL
                     KSRGLVGVRGAGQAFDGLYFVKSVTHSIKRGEYKQNFTLTRNGLVSLTPTVPA"
     gene            640..1164
                     /locus_tag="VGA78_05580"
     CDS             640..1164
                     /locus_tag="VGA78_05580"
                     /inference="COORDINATES: protein motif:HMM:NF016595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEX9893372.1"
                     /translation="MSENGSVRKYFGKYRGMVVSNVDPMQIGRLLVQVPDVLGPIPSS
                     WAMPCLPFTGKQMGMWCLPQIGTGVWVEFEQGNADYPIWSGCWYGLVAEVPALALAAP
                     PAIPNVVIQTAAQNTLMLSDLPGPTGGILLKTTSGAFISVNDIGITISNGKGAIITMT
                     GPTVDINLTALTVT"
     gene            1167..1499
                     /locus_tag="VGA78_05585"
     CDS             1167..1499
                     /locus_tag="VGA78_05585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893373.1"
                     /translation="MPTPVAHVGAVALCPHGGPVTEIPATPRVLLSGMPAATMADQYL
                     IAGCVFNVAGAPHPCVRVQWLVPAVRVTASLMPLILQTSVGLCLAADQVPQGPPVVSS
                     TQPRVLGT"
     gene            1501..1863
                     /locus_tag="VGA78_05590"
     CDS             1501..1863
                     /locus_tag="VGA78_05590"
                     /inference="COORDINATES: protein motif:HMM:NF016829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HEX9893374.1"
                     /translation="MNLDYPFGFNGLGRTRECPDEEHLRDLIEQVLFTSPGERVNRPT
                     FGSGLMQLVFAPNSDTLAAATQLSVQAALQQWLGDLIEVRAVEVANPDSTLRVTVRYA
                     SRRTAEERTDEFALGIQP"
     gene            1860..4502
                     /locus_tag="VGA78_05595"
     CDS             1860..4502
                     /locus_tag="VGA78_05595"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HEX9893375.1"
                     /translation="MIYVCCNRKRGEAVRLHPTLNGIEYLEVLDDDAPAGSPRQRTIV
                     VRCYKPVGGLDGDNVRIEGGTRIRPVIVEWAFPADTIAGQGVLTPAEAAFVADLDDPA
                     QLLVVRTAAYGDFSTYTLRLVAGAGLDQPPANFDPVLSSVEFSFKAECPTPFDCARPR
                     TCPPEARETPGFSYLAKDYASFRGLMLDRLALLLPRWTERNPADLGVALVELLAYAGD
                     SLSYRQDAVATEAYLDTARSRVSVRRHARLVDYFMHDGSNARCWVQIQAQGAPLTIPA
                     GTQLLSRASGLAGPVVTKGSREYDRALNAGAAVFETMHRAVLYPPNNTLFFYTWGDEA
                     CALPACATRATLKDGASPAERLRLRAGDVLILEERLGPETGSPSDADPTRRHAVRLTK
                     VEPEATPVLTNGIETDRNLATAIEDPLTGQPIVKIEWGQEDALPFAFCLSAPRTDTEL
                     ADQVFEDVSVAQGNIVLADHGLTIPDPEPLGEVPAQGRFTVAPTEPCFCDEADADVVL
                     PTFRPSLRQAPVTQVGQVLLENGAVRRAVFDPNGSAGAAFRWDLRGVLPAIVVTSDGS
                     ERWTAERELLDSRPADRHFMAEVHDDGSTRLRFGDGELGMRPEAASPFTARYRVGNGT
                     AGNIGAEVLAHLADGVSGINVASVLRVRNPLSASGGVDPETIEEVRQKAPFAFRTQQR
                     AVTLDDYEEVALRYPGLQRAAARFRWTGSWRTVFVTLDPLGRDTVTPDPALKQKVRDH
                     LERYRLAGYDLEVDNPRYVSLEIDLQVCVKRGYFGADVQQALLEVFSNRTRADGVKGV
                     FHPDRFSFGQTVYLSPLFQAALAVDGVESVRCLTFRRLGQPDQNKALKEGRIPLSRLE
                     IARLDNNPNFPEHGTFRVTTGGES"
     gene            4499..7192
                     /locus_tag="VGA78_05600"
     CDS             4499..7192
                     /locus_tag="VGA78_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893376.1"
                     /translation="MSGTDGTGCGAGCTCDACRGIRDETPLAVDNRPGLSAIRYRVGD
                     HARFKESLLAGLSRAALPALRDLTTRRDDDFSIGLLDACAVMADVLTFYQERIANESY
                     LRTATERISIGYIARLIGYELRPGAAARTTLAFGMQEGAGAVEKLKLPVGTRVQSTPG
                     PEEKAQVFETVEEVEVRPEWNRIPARALEEQPLGPNTDRVRLKGAGLNLHPGDGFLLV
                     FPAGTDFTAVFRRVRAVEVEPKGQWTTVSLTGGPALATGTFGTLPPPQTGAFVFRKHA
                     SLFGYNAPDFVTLDQSKATPTNAPDWTVQFPSTAPDWITLDGVYREAVVGSWGVWESP
                     GVSVPLIFKVATAVEAGLSAYALSGKVSLLNIEKGKDNTTSVVPLSFAALRSVSVLVQ
                     PEKLELAETPVFWPVFGDKVFFAQTVEGLVPGRMVAVEGKRLRAEVLKPVTLYLFTTF
                     GVTQKSLLPDDRLDLLFFPIPLSGGAVTAFFAIENGLPGLLFALPGQVRYRNDETAVE
                     VVSIRTVAPDRKSITVDPPLAQRYDPPSVTLNANLAESTHGETVRETFAGGDATRGFQ
                     RFPLQQTPLTHVPATTPSGVRSTLRVWVDEVEWREVPALYGRGPNDRVFIIRRDGEGK
                     TWIQFGDGITGARLPTGQRNVRAVYRRGIGTAGILKAGQINLLLDRPAGLTGAANPLP
                     SVDGKDPEVLEDARRNAPLTVLTLDRVVSLQDYEDFALAYAGIYKALATWTWFRSTRG
                     VFLTIAGFNGGAVSLVLRQELRDALAKWGDPFVPTDVANHAAVTFRTGLRVKVDPDRE
                     SAKVLGAVEKALRLEFSFERRGFGQRVTLAAVASAAQGVRGVAAVQVARLYRSGDSDL
                     EAGLFAPLLARAPQPGERDMVLPAELLTLDPAPLDLLEELP"
     gene            7189..>8741
                     /locus_tag="VGA78_05605"
     CDS             7189..>8741
                     /locus_tag="VGA78_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893377.1"
                     /translation="MSFDLDSLYRLMPAVHRVRDAESGEPLKALLSVVADQLGVLEED
                     LDRLYDDQFIETCAGWVIPYIGDAIGYRPLNGSIPRIRTPRAEVADTIALRRHKGTAA
                     MLEVLAREVTGWDARVVEFFQLLATTQYLNHLGSGNTRPEMRKWEPLEQVGTAFEAIP
                     HNADVRRIASGRGRFNIPNLGIFLWRLGPYSHTRARAFALDAERFLFSPLGNSAPLFT
                     RPVPLGAIDEFTRRAGRLNLPMPIGRRTADRYLADYYGIDKSFFLWADGVEVDLSEIH
                     ICNLGDLKDAAGQPTGDWAHVPPPAGTVAIDPVLGRIAFADPPLEVEVLYHRGFSMDL
                     GGGEYDRQDAVAEWYQPKETPVTWQRGVTQDPNTIATAPDPTVLATSLVTALADWNAF
                     TAVNPSGFGLICVMDSRTYPQDLVIEVPDGFTLAVVAADWPVNPSVNQRQLGVQSPSG
                     RFPLISGDVEVTGTAPAASKNAGTLILDGLLLGGSVTVTDDHLGRLLLSHCTLVPWTS
                     VGLDRLPLPT"
BASE COUNT         1375 a         3047 c         2922 g         1397 t
ORIGIN      
        1 gatcgagagc atcccgggcc aacaggggac cgattaccag tacgtcacct cgctggcaaa
       61 ggacgtggga tacgtcttct acgtcgatcc gggtccggtg ccgggcacca acacggccta
      121 ctgggggccg gagatcaaga ccggcgtccc ccagccggcg ctcaacgtga acatggacgc
      181 gcacaccaac gtcgagtcgc tgagcttcag tttcgacggc ctctccaaca ctctgccgat
      241 cgtgttcgtg cagaaccaga tgaccaaggt cacctatcct attcccattc caccggtcaa
      301 tccgctccag cccccgctcg gcgccaccgg cctcatcccg acgaagatcg agttcctcaa
      361 ggagacggcg aagatgacgc cgatgaaggc catcatgacc ggcctggcgg tggcgtcggc
      421 ttcttccgag gcggtcaagg gcaccggcac gctcgacgtg ctgcgctacg gccggatact
      481 caagtcgcgg ggactcgtgg gggtgcgcgg tgccggccag gccttcgacg gtctctactt
      541 cgtgaagagc gtgactcact cgatcaaacg gggcgagtac aaacagaact tcacgctcac
      601 ccggaatggg ctcgtctccc tcaccccgac ggtgccggca tgagtgagaa cggatcggtc
      661 cgcaagtact tcggcaagta ccgggggatg gtggtcagca acgtcgaccc gatgcagatc
      721 ggccgtctct tggttcaggt gcccgacgtg ctgggaccca tcccttcctc ctgggccatg
      781 ccctgcctgc cgttcaccgg aaagcagatg ggcatgtggt gcctgccgca gatcgggacc
      841 ggcgtgtggg tggagttcga acagggcaat gccgactacc cgatctggtc gggctgctgg
      901 tacgggctcg tcgccgaagt accggcgctc gcgctggccg cgcctcccgc aatccccaat
      961 gtcgtgatcc agacggccgc gcagaacacg ctcatgctga gcgaccttcc gggtccgacc
     1021 ggcggcatcc tgctcaagac tacatccggg gctttcatct cggtgaacga catcggcatc
     1081 acaatctcta acgggaaggg cgcgatcatc acgatgaccg gcccgacggt ggacatcaac
     1141 ttgaccgcgc tcacggtgac ctgacggtgc ccacgcccgt ggcccacgtc ggcgcggtgg
     1201 cgctgtgccc ccatgggggc ccggtgacgg agatccccgc cacccctcgg gtcctcctga
     1261 gcgggatgcc ggccgccacc atggcggacc agtatctcat cgcagggtgc gtcttcaacg
     1321 tcgcgggcgc gccgcacccg tgcgtccggg tccagtggct ggtgccggcg gtgcgagtca
     1381 cggcgagcct gatgccgctg atcctccaga ccagcgttgg cctgtgcctg gccgcggatc
     1441 aggtgcccca gggacctccc gtggtgagct caacccagcc tcgcgtgctc gggacctgag
     1501 atgaacctgg actatccctt cggcttcaac ggcctcggcc gcaccaggga gtgcccggac
     1561 gaggagcacc tccgcgacct catcgagcag gtgctcttca cctcccctgg ggaacgggtg
     1621 aaccgcccca cgttcgggag cgggctgatg cagttggtat tcgcgcccaa cagcgacacc
     1681 ctggcggcgg ccacccagtt gtcggtccag gccgctctcc agcagtggtt gggcgatctg
     1741 atcgaggtga gggcggtgga ggtggcaaat cccgactcga ccttgagggt cacggtacgc
     1801 tacgccagcc gccggaccgc cgaggagagg accgacgagt tcgcgctggg gatccagccg
     1861 tgatctacgt ctgctgcaac cgcaagcggg gggaggcggt gcgcctccac cccaccctca
     1921 acgggatcga atacctcgag gtgctcgacg acgacgcgcc ggccggaagc ccgcgccagc
     1981 gcacgatcgt cgtccgatgc tacaagccgg taggcgggct cgacggcgac aacgtacgca
     2041 tcgagggcgg gacccggatt cgcccggtga tcgtcgagtg ggcgttcccg gccgacacca
     2101 ttgccgggca gggcgtcctc actcccgcgg aggcggcctt cgtcgccgat ctggacgacc
     2161 ccgcccaact cctcgtggtc cggacggcgg cctatgggga cttttccacc tataccctcc
     2221 ggctggtggc cggcgcgggc ctcgaccagc cgccggccaa cttcgacccg gtgctctcct
     2281 cggtggaatt ctcgttcaag gccgaatgcc ccaccccgtt cgactgcgcc cgcccccgga
     2341 cctgtccacc cgaggcgcgc gagacgccgg gcttcagcta tctggcgaag gactacgcca
     2401 gcttccgggg tctcatgctc gatcgcctgg cgctgctgct gccccggtgg accgagcgaa
     2461 atcccgccga tctgggcgtg gcgctggtcg agctgctggc ctacgccggg gattccctga
     2521 gctaccgcca ggacgcggtg gccacggaag cctatctcga taccgcccga agccgtgtct
     2581 cggtgcgccg ccacgcgcgg ctggtcgact acttcatgca cgacgggtcg aacgcgcgct
     2641 gctgggtgca gatccaggcc cagggggcgc cgctcaccat cccggcgggc acgcagctcc
     2701 tgagccgtgc gtcgggtctc gccgggccgg tggtcaccaa aggctcgcgg gagtatgacc
     2761 gcgccttgaa cgccggggcc gccgtgttcg agacgatgca ccgggccgtg ctatacccgc
     2821 ctaacaacac cctcttcttc tatacctggg gcgacgaggc ctgcgccctc cccgcctgcg
     2881 ccacccgggc gacgctcaag gacggcgcga gccccgccga acggcttcgc cttcgcgccg
     2941 gtgacgtcct gattctggaa gagcgcctcg gccccgagac tggcagcccc tcggacgccg
     3001 atccgacccg tcgtcacgcc gtgcggttga cgaaggtgga gccggaggcg acgccggtcc
     3061 ttaccaatgg catcgaaacg gatcggaacc tcgcgaccgc catcgaggac ccgctcaccg
     3121 gccagcccat cgtgaaaatc gagtggggcc aggaagacgc ccttccgttc gccttctgcc
     3181 tatcagcgcc gaggaccgat accgagctgg ccgaccaggt gttcgaagac gtgagcgtgg
     3241 cccagggcaa catcgtcctg gccgaccacg gactcaccat ccccgacccg gagcccctcg
     3301 gcgaggtacc cgcccagggg cggttcacgg tggcgccgac cgaaccctgc ttctgcgacg
     3361 aggcggacgc ggatgtggtc ctgccgacct tccggccgag cctacggcag gccccggtga
     3421 cacaggtggg gcaggtcctg ctggagaacg gggccgtccg ccgcgccgtc ttcgatccca
     3481 acgggtcggc gggggccgcg tttcggtggg accttcgcgg cgtgctcccg gccatcgtgg
     3541 tgacctcgga cggcagcgag cgctggacag ccgagcgcga gctgctcgat agccgtccgg
     3601 ccgaccggca cttcatggcg gaggtgcacg acgacggctc gacccggctg cggttcggcg
     3661 atggcgagct gggcatgcgg ccggaggcgg cgtccccctt caccgcccgg taccgggtgg
     3721 gaaacgggac cgccgggaac atcggtgcgg aagtactggc tcatttggcc gatggagtgt
     3781 cgggcatcaa cgtcgcgtcc gtgctgcggg tgcgtaaccc gctgtccgcc agcggcgggg
     3841 tggatcccga gaccatcgag gaggtccgcc aaaaggcgcc gttcgccttc cgcactcagc
     3901 agcgggcggt gacactcgac gactacgagg aggtggccct ccgctaccct gggcttcagc
     3961 gcgccgcggc ccggttccgg tggaccggaa gctggcggac ggtcttcgtg acgctggacc
     4021 cgctcggccg cgataccgtc acccccgatc cggcgctcaa gcagaaggta cgggaccatt
     4081 tggagcgtta ccgcctggcc ggctacgacc tcgaagtgga caacccgcgc tacgtctcgc
     4141 tcgagatcga cctccaggtc tgcgtcaagc gcgggtactt cggggcggac gtccagcagg
     4201 cgctgctgga ggtattcagc aaccggactc gcgccgacgg cgtgaaaggt gtcttccatc
     4261 ccgaccgctt cagcttcggc cagaccgtct acctcagccc gctgttccag gccgcgctcg
     4321 cggtagacgg agtggaatcg gtgcggtgcc tcaccttccg ccgcctgggc cagcccgacc
     4381 agaacaaggc cctgaaggaa ggcagaatcc cgctgagccg gctggagatc gcgcggctgg
     4441 acaacaaccc gaacttcccg gagcacggaa ccttccgggt gaccacgggg ggggagtcgt
     4501 gagcgggacg gacggcaccg gctgcggggc cggctgcacc tgcgatgcct gtcgcgggat
     4561 ccgcgacgag acgccgctgg cggtcgacaa tcgccccggc ctctcggcca tccgctaccg
     4621 ggtgggcgat catgcccggt tcaaggagag tctcctcgcc gggctttccc gggccgcgct
     4681 gccggcactc cgggacctga cgacccgacg ggatgacgac ttctccatcg ggctgctgga
     4741 cgcctgcgcc gtgatggccg atgtgctgac cttttatcag gagcgcattg ccaacgaatc
     4801 gtatctcaga acggcaaccg agcggatctc gatcggttac atcgcccgcc tcatcggcta
     4861 cgagctgagg cccggagccg ctgcccgcac cactctcgcc ttcggcatgc aggaaggcgc
     4921 cggcgcagtg gagaagctga agctgcccgt gggcacccgg gtccagagca cgccgggtcc
     4981 ggaggagaag gcgcaggtct tcgagacggt cgaggaggtc gaggtccgtc ctgaatggaa
     5041 tcggattccg gcccgggcgc tggaagagca gccgttgggg cccaacacag accgggttcg
     5101 gctcaagggc gccggattga acctccatcc cggcgacgga ttcctcctgg tttttcccgc
     5161 cggcaccgac ttcaccgcgg tcttccgcag agtccgggcg gtcgaggtcg agcccaaagg
     5221 ccagtggacg accgtgtcgc tgaccggtgg tccggccctg gccacaggga cattcggcac
     5281 gctgccccct ccccagaccg gcgcgttcgt gttccggaag catgcctccc ttttcggtta
     5341 caacgcgccg gacttcgtga cgctggacca gagcaaggcg actcccacca acgccccgga
     5401 ttggacggtt cagttcccgt ccacggcccc agactggatc accctcgacg gcgtctaccg
     5461 ggaggcggtg gtcggctcct ggggggtctg ggagagtccg ggggtgtccg tccccctgat
     5521 cttcaaggtc gcgacagccg tcgaagcggg tctctccgcg tatgcgctga gcggcaaggt
     5581 cagcctgctc aacatcgaga agggcaagga caacactacc tcggtcgtgc cgctgtcatt
     5641 cgcggctctc cgctcggtat cggttctggt gcagccggaa aagctggaac tcgccgagac
     5701 tccggtgttc tggccggtat tcggcgacaa agtgttcttc gcccagacag tcgagggctt
     5761 ggtccctggc cgcatggtag cggttgaggg gaagcggctc cgagccgagg tgctgaagcc
     5821 ggtgacgctg tacctgttca ccaccttcgg cgtaacccag aagagcctcc tgccggacga
     5881 tcggctcgac ctgctgttct tccccatccc gctctcgggc ggggcggtca cggcattctt
     5941 cgcgatcgaa aacgggctgc ccggcctgct cttcgccctt cccggccagg tccgctaccg
     6001 gaacgacgaa acggcggtgg aggtggtctc catcaggacc gtggccccgg accggaagag
     6061 catcaccgtg gacccgcccc tcgcgcagag gtacgacccg cccagcgtga ccctcaacgc
     6121 caacctggcc gagtccactc acggtgaaac ggtgcgggag acgttcgcgg ggggcgatgc
     6181 gacccgtggg tttcagcggt tcccgctcca gcagaccccg ttgacccacg tacccgcgac
     6241 gacgccgagc ggcgtccgct ccacgctgcg ggtctgggtg gacgaggtcg agtggcggga
     6301 ggtgccagcg ctctacggcc gcgggccgaa cgaccgggtg ttcatcatcc ggcgcgacgg
     6361 cgagggcaag acgtggatcc agttcggcga cggcatcacc ggtgcgcggc ttcccaccgg
     6421 ccagcggaat gtgcgcgcgg tctaccgccg cgggatcggc acggcgggca ttctcaaggc
     6481 cggtcagatc aatctgctgc tcgaccggcc cgccggtctc acgggcgcgg cgaatccgct
     6541 ccccagcgtc gacggcaagg accccgaggt gctggaggac gcgcgccgga atgcgccgtt
     6601 gaccgtgctc acgctggacc gggtggtgtc gctgcaggac tacgaggatt tcgccctcgc
     6661 ctacgcgggc atctacaagg cgctcgccac ctggacctgg ttccggagca ctcgcggcgt
     6721 gttcctcact attgccggat tcaacggagg cgcggtctcc ctggtgctgc gccaggagct
     6781 ccgggacgcg ctggccaaat ggggtgaccc cttcgtcccc accgacgtag cgaaccatgc
     6841 ggccgtcacc ttccggaccg gcttgcgggt gaaggtcgat cccgaccgcg agagcgcgaa
     6901 ggtcctgggg gcggtggaga aggcgctgcg cctggaattc tccttcgagc gccgggggtt
     6961 cggccagcgg gtgaccctcg ccgcagtggc gtcggcagcc cagggcgtgc gcggtgtggc
     7021 cgcggtgcag gtggcccggc tctatcgctc cggcgattcc gatctggagg cggggctctt
     7081 cgctccgctc ctggcccgcg ccccgcagcc cggcgaacgt gacatggtgc tcccggccga
     7141 gctcctgacg ctggatccgg ccccgctgga tctgctggag gagctgccat gagcttcgac
     7201 ctcgattcgc tctaccggct gatgccggcc gtgcaccggg tccgcgacgc cgagagcggc
     7261 gagccgctca aagcgctgct ctcggtcgtc gccgaccagc tcggcgtgct ggaggaggat
     7321 ctcgaccgcc tctacgacga ccagttcatc gagacctgcg ccggctgggt gatcccctac
     7381 atcggcgacg cgatcggcta tcggccgctg aacgggagca ttccccggat ccgcacgccg
     7441 cgcgccgagg tcgccgacac catcgcgctg cggcggcaca agggcacggc ggccatgctc
     7501 gaggtcctgg cccgcgaggt caccggatgg gatgcgcggg tggtggagtt cttccagctc
     7561 ctggccacca cccagtacct gaaccatctg ggttcgggca acacccggcc cgagatgcgc
     7621 aaatgggagc cgctggaaca ggtaggcacg gccttcgagg cgattcccca caacgccgat
     7681 gtccgccgca tcgcctccgg acgcggtcgc ttcaacatcc ccaacctggg gatcttcctc
     7741 tggcggttgg ggccctattc ccatactcgc gcccgtgcat tcgcgctgga cgccgagcga
     7801 ttcctcttca gcccgctggg caactccgct cccttgttca cccgaccggt gccgctgggg
     7861 gcgatcgacg aattcacccg cagggccggc cggctcaacc tgccgatgcc gatcggccgg
     7921 cgcaccgccg accgctacct ggccgactac tacggcatcg acaagagctt cttcctctgg
     7981 gccgacggcg tggaggtcga tctcagcgag atccacatct gcaatctggg agacctgaag
     8041 gacgccgcgg gccagcccac cggtgattgg gcccacgtgc cgcccccggc cggtacggtg
     8101 gcgatcgacc cggtgttagg ccgaatcgcc ttcgccgatc cgccgctgga agttgaggtg
     8161 ctgtatcacc gtggcttcag catggacctg gggggaggcg agtatgaccg ccaggatgcc
     8221 gtggccgaat ggtaccagcc gaaggagacc ccggtcacct ggcagcgagg cgtgacccag
     8281 gacccgaaca ccatcgccac agcacccgat ccgaccgtcc tcgccacctc gctggtcact
     8341 gccctggcgg actggaatgc ctttaccgcg gtaaacccgt cgggcttcgg gctgatctgc
     8401 gtgatggact cgcggaccta tccccaggac ctcgtgatcg aggtgccgga cgggttcacc
     8461 ctcgccgtgg tggccgccga ctggccggtg aacccgtccg tcaaccagag gcagttggga
     8521 gtccagagcc ccagcggccg gttcccactg atctcgggcg acgtcgaggt gaccggcacc
     8581 gctccggccg ccagcaagaa cgcggggacg ctgattctcg acgggctgct cctgggcggg
     8641 tcggtcacgg taaccgacga ccatctcggc cggctgttgc tctcccattg caccctggtc
     8701 ccctggactt cggtcgggct ggaccggctt ccgctcccca c
//
LOCUS       DASWKS010000188         4474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1949936, whole genome shotgun sequence.
ACCESSION   DASWKS010000188 DASWKS010000000
VERSION     DASWKS010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4474
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1949936"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            388..816
                     /locus_tag="VGA78_05610"
     CDS             388..816
                     /locus_tag="VGA78_05610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893378.1"
                     /translation="MVSTELESTADRLPPVRLLLARLHRTLLEAERKDLERERGRIAS
                     AEYLGLLLNDSRFAWLRPMGRMVAKLDEVIAEAETTGAAISELHAGLLLDEVGQIVTL
                     RTGLEAGLRYVDWLQREPDVVLAHAALSAALKPRPTAWAA"
     gene            1009..1437
                     /locus_tag="VGA78_05615"
     CDS             1009..1437
                     /locus_tag="VGA78_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893379.1"
                     /translation="MTQIQPEGTVDRIPTVRQLLARLHQVLIIAERNELEQEQGSVGA
                     GDLLQRLLGDERFAWLRPMGRMVTKLDDLLAEAEKRGSPISERMARQALIDVRRVVSR
                     TTGLQAGWRYADWVQRDPDIVLAHAALASALRSQPTAWAA"
     gene            complement(1434..2339)
                     /locus_tag="VGA78_05620"
     CDS             complement(1434..2339)
                     /locus_tag="VGA78_05620"
                     /inference="COORDINATES: protein motif:HMM:NF016142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEX9893380.1"
                     /translation="MSDLVISQTVRTALEAGAPIVALESTVIAHGLPWPENLALALRL
                     EATVREQGAVPATVAVLGGAMRVGLEPGDLEQVARGDHIDKLSRRDLPIALARGTDGA
                     TTVSATMLIAHAAGIVVLATGGIGGVHRDDRNDVSGDLPELARTPMIVVCSGAKAILD
                     LPATLEWLETHGVPVIGYGTSEFPAFFTRSSGLPLEARAETPSEVAAVARAAWRNGLD
                     TAVLVTVPCPAGAALSAESMEAAVTRAVLEAGQTGVKGKVLTPYLLRRVAELTGGQSR
                     AANRALLDRNAEVAAMIARALYPGG"
     gene            complement(2336..3781)
                     /locus_tag="VGA78_05625"
     CDS             complement(2336..3781)
                     /locus_tag="VGA78_05625"
                     /inference="COORDINATES: protein motif:HMM:NF006560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893381.1"
                     /translation="MKGFDLRSCASILFLAAGLATPAAAQHDLVIAGGRVMDPESGLD
                     AIRWVGITGGQISAISATPLTGRTVLNAAGLVVAPGFIDLHAHGQDDENYRVFAMDGV
                     TTALEMEVGTWDIPGWYAERDGKALINYGASISHVQTRMKVLGDPGSFLPSGEGGRGL
                     ASPAQMVEMQRRLAEGLRQGGLGIGFGLQYTPGATRWEVLEMFSVAARARAPAFVHVR
                     AFGTREPGSSVESFVEVIGAAAITGAPLHIVHLNSMSLSSTPQTLRIVTDAQRRGMDL
                     TTEAYPYSAGMTSIESALFDQYENAPDSVYHQFMWVATGERMTRESFQRFRKQGGPVV
                     LFLNTLEMEALAIESPLTAIASDGGVDRGKGHPRTAGTYARVLGYYVREKQSLSLMDA
                     LRKMALLPAQRLEKWAPAFAAKGRLTVGADGDISVFDPATVIDRSTYQEPTRPSVGFK
                     YVLVNGVPVVKDGALVPGVYPGRAARAPTTR"
     gene            complement(3778..>4474)
                     /locus_tag="VGA78_05630"
     CDS             complement(3778..>4474)
                     /locus_tag="VGA78_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEX9893382.1"
                     /translation="FTGDSTRPSPLFGHGPDWGYSYYGAVWYGDEIWNGGRERDYDKD
                     GEVEAWEALRYCDEAFGGTCFTPWSKFQHPTLGEVEIGGYNPKFFSQNGPPEVLEQWA
                     GNQAMFNLYMAKSLPKVEIVDLKIATVKASKDSATHELRVTVRNTGRLPTALEQAKKV
                     KMVQPDRVVAEFARGSASRTAGRPPEFWLNGNETRTVTLRLKRGPAETDAKFKLRLLS
                     TRGGVAEREVTLP"
BASE COUNT          710 a         1565 c         1451 g          748 t
ORIGIN      
        1 ccgagaacgc cgaacccgat gccggacgac gaggatcccg tggtcgaggc caagtgggag
       61 aagcccaggc cgagggccca gcgagtggcc ggccgtagct gcgccgaggt cgaggtcgcg
      121 aaacacaggg ccacaatcga cagcgccagc atgatgcggg ggcgcattga gcactccgat
      181 gggggtgcct ctagaatggg aaggaaggcc tgattcgtcc ataggcccgt tctgctcagt
      241 ccaccagagc agtgtctata acaacaagat tggcgaggcc gttgttacag acgggaacct
      301 tccgccctgc tcccgcgttc tactacgtga atagcgccgc gccaggatgc ggcgcgttgt
      361 gtatctagtt ctgcgcctgg aggaccgatg gtatcaactg aactcgaaag caccgccgac
      421 cggcttccgc ccgtccggct gctgctggct cgcctgcacc ggaccctgct tgaggcggag
      481 cggaaggacc tcgagcgcga gcgtggccgg atcgcttcgg ccgagtatct cggcctgctg
      541 ctgaacgact cccgcttcgc ctggctccgg cccatgggcc ggatggtggc caagctggac
      601 gaggtgatcg ccgaagccga gaccaccggc gccgccatct cggagctcca cgccggcctg
      661 ctgctggatg aagtgggtca gatcgtcacc ctccggaccg gcctcgaagc cgggctgcgc
      721 tacgttgact ggctccagcg ggagcccgac gtcgtgctcg cccatgcagc cctctcggca
      781 gccctcaagc cgcgtccgac cgcgtgggca gcgtagccta ttgaggacgg caggaacctc
      841 cctgccgtcc ttgtcttacc cgccctgtgc gccaagtcac ggcggtcaac cctctgtagt
      901 gctttcttac tgaagatccg gcgtagaact tgcgacttgg ccttggcgtt tcactggtgg
      961 agcgcgtcac acctggtgtg acgagttgcc tctgtgaagg gggggtgtgt gactcagatc
     1021 cagcccgagg ggactgtcga ccggattcca acggtccgcc agttgctcgc ccgcctgcat
     1081 caggtattga tcatcgccga gcggaacgag ttggagcagg agcaggggtc ggtaggcgcc
     1141 ggagacctct tgcagcgtct gctcggggac gagcgctttg cctggctccg gcccatgggc
     1201 cggatggtca ccaagctgga cgaccttctt gcagaagccg agaagcgtgg cagtccgatc
     1261 tccgaacgga tggcacgtca ggcgctgatc gacgtccgcc gggtcgtttc ccggaccacc
     1321 gggcttcagg ccggctggcg ttacgccgac tgggtccagc gggatcccga tattgtcctg
     1381 gcgcacgcgg ccctggccag cgcgctccgg tcccaaccca ccgcctgggc cgcctaaccc
     1441 ccggggtata gcgcccgcgc gatcatcgcc gcgacctcgg cattccggtc caggagtgcc
     1501 cggttcgcgg ctctgctttg cccccccgtg agctcggcca cccgccgcag caggtagggg
     1561 gtgagcacct tccctttcac gccggtctgg cccgcctcga gcaccgcgcg agtcaccgcg
     1621 gcctccatgc tttcggccga gagcgccgcc ccagccggac aggggaccgt caccagcacc
     1681 gccgtatcca gtccgttccg ccaggccgct cgcgccaccg ccgccacctc cgatggtgtt
     1741 tccgcgcgag cctccagcgg caggccgctg gatcgggtga agaaggcggg gaactcgctg
     1801 gtgccgtagc cgatcacggg cactccgtgg gtctcgagcc attcgagcgt ggcgggcaaa
     1861 tcgagaatcg ccttggctcc ggagcacacc acgatcatgg gagtgcgggc cagctcgggc
     1921 aggtcaccgg agacgtcgtt ccgatcgtcc cgatgcacac ccccgatgcc accggtggcc
     1981 aacacgacga tgcctgcggc gtgcgcgatc agcatcgtgg ccgaaaccgt cgtggcgccg
     2041 tccgtccctc gggccagcgc gatggggaga tcgcgccggc tgagtttgtc gatatgatcc
     2101 ccccgggcga cctgctccag atcgcccggc tccaacccaa cccgcatggc cccgcccagc
     2161 acggccacgg tggcgggcac cgcgccctgt tcgcggacgg tcgcctccaa ccgcagcgcc
     2221 agcgccagat tttccggcca ggggaggccg tgcgcgatga ccgtggattc gagcgcgacg
     2281 atcggcgcgc cggcctcgag ggccgtgcgc accgtctggc tgatgacgag atcgctcacc
     2341 gagtggtggg agctcgcgcg gcacgtcctg ggtagacgcc cggcaccagc gccccgtcct
     2401 tcaccaccgg cacgccgttc accagcacat acttgaagcc caccgagggc cgggtcggtt
     2461 cctggtaggt ggagcggtcg atcacggtcg cggggtcgaa gaccgagata tcgccatcgg
     2521 ccccgaccgt gagacgtcct ttggcggcaa acgcgggcgc ccacttctcc aaccgctgcg
     2581 cggggagcag cgccatcttg cgaagcgcgt ccatcaggct cagcgactgt ttctcccgca
     2641 cgtaataccc gagcacgcga gcataggtcc cggcggtgcg gggatgcccc ttcccccggt
     2701 ccacaccccc gtcgctggcg atggcggtca gcggactctc gatcgccagc gcttccattt
     2761 cgagggtgtt gaggaacagc accaccggtc caccctgctt gcggaaccgc tggaagctct
     2821 cccgggtcat gcgttctccg gtggccaccc acatgaactg gtgatatacg ctgtccggcg
     2881 cgttctcgta ctggtcgaac agcgccgact cgatcgaggt cattccggcg ctgtagggat
     2941 aagcctcggt ggtcaggtcc atcccgcggc gctgggcgtc cgtcacgatc cggagggtct
     3001 gcggcgtcga ggagagactc atgctgttca ggtggacgat gtgcagcggc gcgccggtga
     3061 tcgcggccgc gccgatcacc tccacgaacg actccacact gctgcccggc tcccgggtcc
     3121 cgaaggcccg gacgtgcacg aacgcggggg cgcgggcccg agcggccacc gagaacatct
     3181 ccagaacttc ccatctggta gcgccggggg tgtactgcaa tccaaagccg atcccgagcc
     3241 cgccttgccg gagcccctcg gccaaccgcc gctgcatctc gaccatctgc gccgggctgg
     3301 ccagaccacg tccgccctca ccgctgggca ggaagctgcc cgggtcgccc agcactttca
     3361 tgcgggtctg cacgtggctg atgctggcgc cgtagttgat cagcgccttg ccgtcccgct
     3421 cggcgtacca tcccgggatg tcccacgtgc cgacttccat ctccagcgcg gtcgttacgc
     3481 catccatcgc gaagacccga tagttctcgt cgtcctgtcc gtgggcgtgg aggtcgatga
     3541 aaccgggagc caccaccagt cccgccgcgt tgaggacggt ccggcccgtg agcggagtgg
     3601 cactgatcgc actgatctgt ccgccggtaa tgccgaccca gcgaatggcg tcgagcccgg
     3661 actccggatc catcacccgt ccgccagcga tgacgaggtc gtgctgggcc gcagccggag
     3721 tggccagccc tgcggcgaga aagaggatag acgcgcagga gcgaagatcg aagcccttca
     3781 tggcaacgtc acctcccgct cggccacgcc cccgcgggta ctcagcagcc gcagcttgaa
     3841 cttggcgtcg gtctcagccg gcccgcgctt gaggcggagc gtcaccgtcc gggtctcgtt
     3901 gccgttgagc cagaattccg gcgggcggcc ggcggttcgg ctggcgctgc ctcgggcaaa
     3961 ctcggccacc acccggtcgg gctgcaccat cttcaccttc ttggcctgct ccagcgcggt
     4021 cgggagccgg ccggtattgc gcaccgtcac ccgcagctcg tgggtggccg agtccttcga
     4081 tgccttcacc gtcgcgatct tcagatccac gatctccacc ttgggaagcg atttggccat
     4141 gtacaggttg aacatcgcct gattgccggc ccactgctcc agtacctcgg gggggccatt
     4201 ctgggagaag aacttggggt tgtatccgcc gatctccacc tcgcccagtg tcggatgctg
     4261 gaacttgctc cacggcgtga agcacgtacc gccgaaggct tcgtcgcagt accgcagggc
     4321 ttcccaagcc tcgacttcac cgtccttgtc gtaatcgcgc tcgcgtcccc cgttccagat
     4381 ctcgtcgcca taccacaccg caccatagta cgaatacccc caatcgggcc cgtggccgaa
     4441 gagcggcgac ggacgggtcg agtcgccggt gaag
//
LOCUS       DASWKS010000189         3204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_825507, whole genome shotgun sequence.
ACCESSION   DASWKS010000189 DASWKS010000000
VERSION     DASWKS010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825507"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..993)
                     /locus_tag="VGA78_05635"
     CDS             complement(61..993)
                     /locus_tag="VGA78_05635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893383.1"
                     /translation="MTEIREYPVPAGSHPHDVAPAPDGAVWYTAQHSGALGRLDPISG
                     ETREIPLGSGSSPHGVIVGADGAAWVTDSGLNAIVRVDPRTEAVTVFPLPSGSGRANL
                     NTAAFDGAGVLWFTGQNGVYGRLDPEQGEAEVFDAPGGRGPYGIAATPDGTVYYASLA
                     GSHIARIDPVTGAATVIEPPTPNQGARRVWSDSLGRIWVSEWDAGQLGRYDPATGAWQ
                     EWRLPGSSPQAYAVYVDEQDFVWLSDFGANALVRFDPGTEQFEVFPLPSPGAAVRQIL
                     GRPGEVWGAESGVDKLVVIRFSDSNGSEAGGYGP"
     gene            1336..2517
                     /locus_tag="VGA78_05640"
     CDS             1336..2517
                     /locus_tag="VGA78_05640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9893384.1"
                     /translation="MDLLSGHSRPAFELADLLIRMGHQVRVVTTQLSPARQAKHEALL
                     LRQPNLAAVPLERSFRDMADMLLRPSATHRHLKDIFGWADVFHGFSLPALSLLTTRVE
                     FPVPVVLSLNTIPQPSLRDLARTNGGLLWTQHRPWVAQLLARGIVKRSLREFDHIICW
                     TKYLMAEAARQGAERRNLTHLPIGLDSTRFELTRSQRRRSSIVFLWLGWATPLRGVEV
                     LLRAFLRALRRLPDARLILADRGPNQRSEVRLHARNVRRLHALARAEGQDGAVCWAGF
                     EANVSALINASDVVVLPFPTAVGYSHPPLTLLEAMAHGKPVVATRIGSIAEYVEDGKE
                     GRLVEPGDVLDLEEALVQMASLDRDELGRRARERVAALSSWEEIARRTVGLYESVLAS
                     S"
     gene            2588..>3204
                     /locus_tag="VGA78_05645"
     CDS             2588..>3204
                     /locus_tag="VGA78_05645"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893385.1"
                     /translation="MDPYRLPSSIIPSRYDIRLSPDLDATAFEGQETIALDVREPIEE
                     VVLNAAELEIVTAELEDADGERWPCAARLDETTERLHLSPPRPLTPGTWHLSLSFRGT
                     LNDRLRGFYRVNYQEPDGQSAVLAATQFESTDARRAFPCWDEPSFKAVFSLTLTIDPQ
                     LTAVANTSILSEAVENGLKVIRFADTIRMSTYLVAIVVGRLAIPPA"
BASE COUNT          518 a         1104 c         1022 g          560 t
ORIGIN      
        1 tcaagaatag ggcggcgatt tcgcgcagtc taccgggcac gaccggccga ggcgtgcagc
       61 tcaggggccg tacccaccag cctctgaccc gttcgaatct gagaagcgaa tgaccaccag
      121 cttgtcgacc cccgactccg ccccccatac ctccccgggc cggcccagga tctggcgcac
      181 cgcggcgccg gggcttggga gcgggaatac ttcgaactgc tcggtccctg ggtcgaaccg
      241 gacgagtgcg ttggcgccaa agtcgctcag ccagacgaag tcctgttcat ccacgtacac
      301 tgcgtacgct tgtgggctcg atccgggcag ccgccattcc tgccaggcgc cggttgccgg
      361 gtcatacctg ccgagctggc cggcgtccca ctcgctcacc cagattcgcc ccaacgagtc
      421 ggaccagacc cggcgcgctc cctgattcgg cgtgggaggt tcgatgacgg tcgccgcgcc
      481 cgtcacaggg tcgatcctcg cgatgtggct gccggccagg gaggcgtagt acaccgtccc
      541 atcgggcgtc gcggcaatcc catacggccc gcggccgccg ggggcatcaa agacttcggc
      601 ctctccctgt tcgggatcca gccggccgta cacgccgttc tggccggtga accacaacac
      661 gccggcgccg tcgaaggccg ccgtattgag attggcgcgg ccggacccgg agggcagcgg
      721 gaacaccgtc actgcctcgg tacgcggatc gacccggacg atggcgttca atccgctgtc
      781 ggtgacccag gccgcgccgt ccgccccgac gatgacgcca tgcggcgatg agcccgaccc
      841 gagcgggatc tcgcgcgtct ctccgctgat tgggtccaat ctccccaggg cgcccgagtg
      901 ttgcgcggtg taccagacgg ccccgtccgg cgcgggcgcc acgtcgtgcg gatgggaacc
      961 ggccgggacc gggtattccc ggatctccgt caccgcggga ggtgatgctc tttcgcccac
     1021 aaccgcgggc ccctcggcct ctgctggcgt cgccgcggtt gaggcttccg cagccggcgt
     1081 cgaaaacgat cccactccgg gctgggtggt tgggttcccg gcctgaggta ggggctcgct
     1141 cccgcgggtc gccgtacagc cggccagtgc cagcgcgagg atcatcgtcg gtgctccccg
     1201 cagggttggg cgggcttcaa cgggcatgac ttccacgaat ccgattctaa ctgagcggcc
     1261 caagctgcca gcccggacaa ccggaatgtt acgatacgct tgatagtcat gaacatttgc
     1321 ttctggggca cccgcatgga tctgctttcc gggcattccc gcccggcctt cgagttggcc
     1381 gatctgctca ttcgaatggg ccaccaggtg agggtcgtca cgactcagct cagccccgcc
     1441 aggcaggcga agcacgaggc cctgttgctc aggcaaccga atctggcggc tgtcccgctg
     1501 gagcgcagct tccgagacat ggccgacatg cttctgcgac cttccgctac ccaccggcac
     1561 ctgaaggata tcttcggctg ggccgatgtc ttccacggtt tcagccttcc ggccctgagc
     1621 ctgcttacca ctcgggtgga gtttcctgtc ccagtggtcc tgagtctgaa cacgattcct
     1681 cagccaagcc tcagagacct agccaggacc aacgggggcc tgctctggac ccaacatcgc
     1741 ccttgggtcg cgcagctcct ggctcgaggg atcgtgaagc ggtcactgag agagttcgac
     1801 cacatcatct gctggactaa gtacctgatg gccgaggccg ccaggcaggg agcggagcga
     1861 cgcaacctga cccacctccc aatcgggctc gactcgaccc gttttgaact tacccgctcg
     1921 cagagaaggc gcagctctat cgttttcctc tggctgggct gggcgacccc gctgcgcggg
     1981 gtcgaggtgc ttttgcgggc tttcctgcgg gcgctgcgca gactgccgga tgcccggctc
     2041 atcctcgccg accggggtcc gaaccagcgg agcgaagtcc ggcttcacgc cagaaacgtg
     2101 cgccggctgc acgcgttggc gcgcgccgag gggcaggatg gcgcagtctg ctgggcgggc
     2161 ttcgaagcga atgtctccgc cctgatcaat gcttcggacg tggttgtcct tccctttccg
     2221 acggcggtgg gctattccca cccacctctc acgctgttgg aagcgatggc ccatggtaag
     2281 ccggtagtcg ccacccggat tgggagcatc gcggagtacg tggaggacgg gaaggaaggg
     2341 cggctggtcg agcccggaga tgtgctggac cttgaagaag cgctggtgca aatggcatcg
     2401 ctggatcggg acgaactggg ccggcgggcg cgtgagcgtg tcgccgctct ctccagctgg
     2461 gaagaaatcg cccggcgaac ggtcggactg tacgagtcgg tgttagcgtc aagctgactg
     2521 ccgtcgggca ctgtgccccg gctggcgcac ccggttacaa tcgcgggccg ctgagacttc
     2581 ggccgctatg gatccctacc gcttacccag ctcgatcatc ccgtcccgct atgacatccg
     2641 gctctctccg gacctggacg cgaccgcctt cgaaggacag gagaccattg ccctcgacgt
     2701 gcgcgaaccg attgaggagg ttgttctcaa cgcggccgaa ctggagatcg taacggccga
     2761 gctggaggac gccgacggcg agcgttggcc atgcgccgcg cggctcgacg aaactaccga
     2821 gcggctccac ctcagtcctc cccggccgct gaccccggga acctggcacc tcagcctatc
     2881 gttccgcggg acgctcaacg accgcctgcg cggcttctat cgggtcaact atcaggaacc
     2941 ggacggccaa tcagccgtgc tggccgccac tcaattcgag tccaccgatg cccgccgcgc
     3001 cttcccatgc tgggacgagc cctccttcaa ggcggtcttc tcgctgactc tgacgatcga
     3061 tccccagctc acggcggtcg ccaacacgag cattctgtcc gaggctgtcg agaacggcct
     3121 caaagtgatt cgcttcgccg acaccatccg gatgtccacg tacctggtgg ccatcgtcgt
     3181 cggacggctc gcaatccctc ccgc
//
LOCUS       DASWKS010000190         6612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2680767, whole genome shotgun sequence.
ACCESSION   DASWKS010000190 DASWKS010000000
VERSION     DASWKS010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6612
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2680767"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="VGA78_05650"
     CDS             complement(<1..969)
                     /locus_tag="VGA78_05650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893386.1"
                     /translation="MNLGSFARWYPAVRYLLLASACAGSDGPTGTGSAVATIQLRTDA
                     TVQILAGDSLQLGLTATDQAGRGLGFASELIQVRSTAPAVATVSEGGLVRVHGAGAAW
                     IVAEATDVPGDSVRIEARQPSGSFRITMLFAPDIPDVVRQVFEAAACRWEEVMGGELE
                     AVELRTAGGDCPTVEGEPPTPELAGTERGVIVYVGHSGRFLPRATVFAVGGPCLQRAL
                     PRPTTILGQVTLKRATPMVQMPADNQRFIATHEMGHALGLVGLVQGPQPVWFDIATGR
                     YTGPMGLEGYRRITRTLPEALSSQGGHWTLPVSDVMSGSDVISLVSI"
     gene            complement(1016..1960)
                     /locus_tag="VGA78_05655"
     CDS             complement(1016..1960)
                     /locus_tag="VGA78_05655"
                     /inference="COORDINATES: protein motif:HMM:NF039197.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5694 domain-containing protein"
                     /protein_id="HEX9893387.1"
                     /translation="MAGADRAAAELSVPSNARLTRCISTETQARRRLVRVPTLCLVAV
                     MAMGSRAPAQIAPAASVPGVKRAEVLVLGVYHMANPGRDVFNMQVDDVRSPRRQEEIA
                     ELIAVLRKFNPTRIAVEHDSQERLNERFRQYLAGNYALTANEIDQLGLRLAKELGDTA
                     VHAVDADGDFPLPRLIKYAKATGQSASLDSLMAQIGARVRAQNEYLKTHTVLQTLRSM
                     NADENVAQDVGAYYLLARYGEPWDYPGPDLLAEWYRRNIRIYNNVMKLVTTPEDRVLV
                     IYGAGHLGWLRQAFAANPMLRLRTLEEFVTTAPRDAGR"
     gene            complement(1947..2594)
                     /locus_tag="VGA78_05660"
     CDS             complement(1947..2594)
                     /locus_tag="VGA78_05660"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9893388.1"
                     /translation="MTPCCSSSHCAAAHYFDETRASQELAAYHRAGSGKTTRRLLAGL
                     RASGAAGTLLDVGSGSGVLTLELLKSGVTEATCVDASAGSLRVARQEAERQGVAQRIR
                     WHEGDMVVLGPTLPVADIVTLDRVVCCYHAWRALLEEAAKHSRRWLAFSYPRDRWYVR
                     VGVQVENLWLRLRGNAFRAFYHPVGAMDAVLRESGLRPIRHDTTAVWQASIYGRG"
     gene            complement(2599..3021)
                     /locus_tag="VGA78_05665"
     CDS             complement(2599..3021)
                     /locus_tag="VGA78_05665"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893389.1"
                     /translation="MKPRISLLTLGVDDLDRVLAFYRDGLGLPTRGIVGREFEHGAVA
                     FFQLQEGLQLAVWPRTSMAADTGLELARPGPPQFTIGHNVNGRAELDELMTQAERTGA
                     TIVKPAETTFWGGYAAYFQDPDRHVWEVAWNPKLSIPE"
     gene            3485..6079
                     /locus_tag="VGA78_05670"
     CDS             3485..6079
                     /locus_tag="VGA78_05670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893390.1"
                     /translation="MSISLAAIVTATVQGQAASRAVYLDKAGVVRWRDNRQEVTLFGA
                     NYVLPTASDYRAAGYVHGDRKKMIDEDMAQFARMGWDGMRLTFWGDWEASDSAGNLVA
                     NDHLDLQDYLIAKARERGIYMLFSPIQLYSSNWPDALERDKATAGFGRVFGKGRMGTD
                     SAAIAAQVNYLRQILNHVNPYTGVALKDEPAILFIELVNEPWHHPEDLPGSIRYINAL
                     TDAVRSTGCTKLVFYNVSQDFRIGEAIRRSRAQGITFGWYPTGLNSGRELEGNYLRTT
                     DIFPDMLRPELARLPRIVYEFDSPDLRNGTMYPAMARTIRAVGGQVALMFAYDMQRTA
                     SRNLGWQTHYLSLAYTPRKAVSAIIAGEAMHRLPRMRSYGSYPENTRFGDFRVSYDED
                     LGELVSTDAFLYAGSTRSTPKDPAALRRIAGYGSSPTVSYEGKGVYFLDKVRPGLWRL
                     EVYPDAVPVRDPFEPPSPGKIVTRAISRAWPMTVTLPDLGASFTVQPVAVGNPRSQAA
                     TEGRFTVTPGVYILSAAGPVDVATLPATIGAVKFTEYHPPPPDSLPLSVQSLSGPELL
                     AGREGELRARVVDWTPSDSVLLFVRPNAGGWFQRFWMGPAGGYEYAATVPAGALREGP
                     SEYVITVFRGGSGLTFPGAIPRKPWDWDWYGKEAWKLDVVGPRTPLVLFAPRTDAARL
                     AFTRIGDAGRRGLFRLGVSEVTGQPIFHLELPVDSSGWSPPDYTASLVIADRIRSRRE
                     TVSAAQALRVRLRGLGPRQLLHVTLMEDDGTSWSAAVPLDSTWSERSLPLAAFTVGRG
                     VLLPQGFPGAWSYWVGPAAGRGGSRDRPQLHRLERLQLSLRREQGVTVPAGSYGVEVE
                     SITLSTTP"
BASE COUNT         1112 a         2204 c         2143 g         1153 t
ORIGIN      
        1 gatcgagacc agcgagatca catcgctgcc gctcatcacg tcggaaaccg gcagggtcca
       61 atggccgccc tgcgaggaca gagcttcagg caaggtgcgg gtgatccgcc ggtatccttc
      121 gagccccatc ggcccggtgt aacgaccggt cgcgatatcg aaccagacgg gctgcggccc
      181 ctgcaccagg cctacaagac cgagcgcgtg tcccatctca tgggtggcga tgaaccgctg
      241 gttgtctgcc ggcatctgga ccatcggcgt ggcgcgtttc agtgtgacct gccccagtat
      301 ggtcgtgggc ctgggcaggg cccgctggag acagggcccg ccgaccgcaa agacggtcgc
      361 tcgcgggagg aatcggccgg aatgacccac gtagacaatg acaccgcgtt cggtgcccgc
      421 gagttcgggt gtgggcggct cgccctcgac ggtggggcag tcgcctcccg ccgtcctcag
      481 ttcaacggcc tcgagctccc cgcccatgac ctcttcccag cggcaggccg ccgcttcgaa
      541 cacctggcgc accacgtccg ggatatcagg cgcaaacagc atcgtgatcc gaaaactccc
      601 ggaaggctgt cgagcctcga tccggacact gtcgcccggg acatcagtgg cctccgcaac
      661 aatccaggcc gcgccggcgc cgtgcacccg aaccaggccg ccctccgaaa cggtcgcaac
      721 ggccggcgcc gtgcttcgta cctggatcag ttccgacgcg aagcccaggc cacgcccggc
      781 ctgatcggtc gcggtcaggc cgagctgaag cgagtccccg gccagaatct gaaccgtggc
      841 gtcggtgcga agctggattg ttgcaacggc cgacccggta cccgtcgggc catctgagcc
      901 ggcgcacgcg gaagccagca gaagataccg tacggccgga taccatctgg cgaatgatcc
      961 caggttcacg cgatgcctgc cgcggtctga tgaccacggg tgcagcgtgt cgtcctcaac
     1021 gcccggcatc gcgcggcgcc gtggtcacaa attcctccag cgtccggagg cggagcatcg
     1081 ggttcgccgc gaacgcctgc cgcagccatc cgaggtgccc ggcgccatag atcaccagga
     1141 cgcggtcttc cggagttgtc accagtttca tgacgttgtt gtagatgcgg atgttccgcc
     1201 ggtaccactc ggccaggagg tccggccccg ggtagtccca gggctccccg tagcgagcca
     1261 gcagatagta tgcaccgaca tcctgcgcca cgttctcgtc ggcgttcatg gaacgcaacg
     1321 tctggagcac ggtgtgggtt ttgaggtatt cgttctgcgc cctgaccctc gccccgatct
     1381 gcgccatcag cgagtccagc gaagccgatt ggccggtcgc cttggcgtat ttgatcaggc
     1441 gagggagggg aaagtcgccg tcggcatcga ctgcgtggac ggcagtatca cccagttcct
     1501 tcgccagccg caggccgagc tggtcgattt cgttggcggt cagggcatag ttgccggcta
     1561 gatactgcct gaagcgctca ttcagccttt cctgggaatc atgttccacg gcaattctgg
     1621 tcggattgaa cttcctgagc accgcgatga gctcggcgat ctcctcctgg cgcctgggac
     1681 tgcggacgtc atcaacctgc atgttgaaga catcgcgtcc gggatttgcc atgtgataga
     1741 cgccgagcac cagcacctcg gcgcgtttga cgccgggcac ggaggccgca ggcgcgatct
     1801 gggccggcgc ccgcgatccc atggccatca cggccacaag acaaagcgtg gggactcgca
     1861 cgagtcgtct ccttgcctgg gtttccgttg agatacaacg ggtgaggcga gcgttggacg
     1921 gaacggaaag ctcggcggcg gccctgtcag ccccggccat aaatgctcgc ctgccatacc
     1981 gcggtggtgt catgccggat cggccgcaac ccactctcgc gcagcactgc gtccatggcg
     2041 ccgaccgggt ggtagaaggc gcggaaggcg ttgccccgca ggcgaagcca gaggttctcc
     2101 acctgcaccc ccacgcggac gtaccaccgg tcgcggggat aggagaatgc gagccagcgg
     2161 cggctgtgct tcgctgcttc ttccagcagc gcccgccagg cgtgatagca gcacaccacc
     2221 cggtcgagcg tgacaatgtc ggccaccggg agagtcgggc ccagtaccac catgtctccc
     2281 tcgtgccacc tgatccgctg ggccactccc tggcgctcgg cttcctgcct ggcaacccga
     2341 agcgagccgg ccgaggcatc gacgcaggtg gcctcggtca cacccgattt cagcagctcg
     2401 agcgtgagca cccctgagcc ggaccccacg tcgagtagcg tgccggcggc tccactcgcc
     2461 ctgagccccg cgagaagccg tcgcgtggtc ttgcccgatc cggcgcgatg ataggcggcc
     2521 agctcctggc tggctcgggt ttcgtcgaag tagtgcgccg ccgcacagtg cgaagaggag
     2581 caacagggag tcacgcggtc actccgggat cgacagcttg ggattccagg ccacttccca
     2641 gacgtgccgg tcgggatcct gaaaataggc ggcgtagccg ccccagaaag tggtctcggc
     2701 tggcttcaca atggtagcgc cggtcctttc cgcctgggtc atcaactcgt cgagctcggc
     2761 cctgccgttc acgttgtgcc caatggtgaa ctggggcggc ccgggccggg ccagctccag
     2821 ccccgtatcg gccgccatgc tggtgcgggg ccagaccgcc agctggaggc cctcctgcag
     2881 ctggaagaag gccaccgctc catgctcgaa ctcccggccg acgattcccc tggtcggcag
     2941 accaagcccg tcgcgataga aggcgagcac ccggtcgaga tcatcgactc ccagggtcag
     3001 taacgagatg cgtggcttca cctgcgcccc ctgtagatct ctgcttgcaa catatcagga
     3061 ggcgcccgga acggcttcgc gggtatagtc cgggggaggc gtgctcttgt tgcgatggcc
     3121 ggccggcgtt cgggccctcg cgcacaacga ttggacaggc tggaggatgg atgtcgcttg
     3181 tcggctgatg atgtggtaga ggatcccgat ctccagctcg ggctggcgcg gcaggaagtc
     3241 tcttggggat cttgacctta ggcgccactt caccgctgga tctgtcgggt acggatattg
     3301 ggccgcgccg ggggcaattt cgttggattc cgtaccgcag gatggccaag tgaccaggtt
     3361 gcacgtagca tccatcgcga agcggatcag gcatttcgtt gattcccatc ggactcgtct
     3421 cacccagggc gccatgctga ctgatcgtcc aatccgaacg accccaagct ccaggcgctg
     3481 gctcttgagc atctcattgg cggccattgt cacggcgact gtgcagggcc aggcagccag
     3541 ccgcgccgtc tacctcgaca aggcgggcgt ggtgcgctgg cgagacaacc gccaggaggt
     3601 cacccttttt ggcgcgaact acgtgcttcc gaccgcctcc gactatcgcg cggccggtta
     3661 tgtccatggc gatcgcaaga agatgatcga tgaagacatg gcccagttcg cccggatggg
     3721 ctgggacggc atgcggctca ctttctgggg cgactgggag gcctccgaca gcgccggcaa
     3781 tctggtcgcc aacgaccacc tggacctgca ggattatctg atcgccaagg cgcgcgagcg
     3841 cggcatttac atgctgttca gcccgatcca gctctacagc tccaactggc ccgacgcgct
     3901 ggaacgggac aaggcgacag cgggcttcgg ccgcgtcttc ggcaaggggc gcatgggcac
     3961 cgactcggcg gccatcgcgg cccaggtgaa ttacctgcgc cagatcctga atcacgtgaa
     4021 tccctacacc ggtgtcgccc tcaaggacga gccggcgatt ctcttcatcg agctggtgaa
     4081 cgaaccgtgg catcaccccg aggatcttcc gggctcgatc cgttacatca atgccctgac
     4141 cgacgcggtc cgcagcaccg ggtgcaccaa gctcgtcttc tacaacgtga gccaggattt
     4201 ccgcatcggc gaggcgatcc ggcgctcaag ggcgcagggc atcaccttcg gctggtatcc
     4261 taccggcctc aacagcggcc gcgagctcga gggcaactac ctccgcacca ccgacatctt
     4321 ccccgacatg ctgcgcccgg aattggctcg cctgccgcgc atcgtctacg agttcgacag
     4381 ccccgatctg cgcaacggca cgatgtatcc cgccatggcg cggaccattc gcgccgtggg
     4441 agggcaggtg gccctcatgt tcgcgtacga catgcagcgg accgcgtcgc gcaacctggg
     4501 ctggcagacc cactacttga gcctggccta caccccgcgc aaggccgtaa gcgccatcat
     4561 cgcgggtgag gccatgcacc gtttgccccg aatgcgctca tacggttcgt atcccgagaa
     4621 cacgcgcttc ggcgactttc gcgtttccta cgacgaagat ctgggcgagc tggtctcgac
     4681 cgacgcgttc ctgtacgcgg gatcgactcg ctccacgccg aaggatccgg ccgcgctgcg
     4741 gcgcatcgcg gggtacggat catctcctac ggtgagctat gaggggaagg gcgtctactt
     4801 cctggacaag gtgcgaccgg gactctggcg cctcgaggtc tatcccgacg ccgtgccggt
     4861 ccgtgacccg ttcgagccgc ccagccccgg caagatcgtg acccgcgcga tcagccgggc
     4921 ctggcccatg acggtcacac tgcccgacct cggcgcctcc ttcactgtgc agccggtagc
     4981 ggtgggtaac ccgcggagcc aggcggccac cgaaggccgg ttcacggtta cgcccggcgt
     5041 ttacattctc agcgccgccg ggccggtcga cgttgccacc ctgccggcta cgatcggtgc
     5101 tgtcaagttc accgaatacc acccacctcc acccgattcc ctgccgctct cggtgcagtc
     5161 gctgtccggc cccgaattac tggcagggcg agagggcgag ctacgggccc gggtggtcga
     5221 ctggacgccc tccgattcgg tccttctctt cgtgcggccc aatgccggag gctggttcca
     5281 gcgcttctgg atgggcccgg ccggcggcta tgagtacgct gccaccgttc cagcaggggc
     5341 gcttcgggaa gggcccagtg aatacgtgat cacggtgttc cggggaggct ccgggttgac
     5401 ctttcccggc gccattccgc gaaagccctg ggactgggac tggtacggca aggaggcctg
     5461 gaagctggat gtggtggggc cccggacgcc gctggtgctc ttcgctccgc gcaccgacgc
     5521 cgctcggctg gctttcacca ggattggcga cgcaggacgc cgcggactct tccgcctggg
     5581 ggtttccgag gtcaccggcc agccgatctt ccacctggag ctcccggtgg actcgagcgg
     5641 ctggagtcct cctgactaca ccgcgtcgct cgtcatcgcg gaccggatcc gctctcggcg
     5701 ggagacggtc tcggcggcgc aagcgttgcg ggtgcggctg cgcggtctcg ggccgcgtca
     5761 gctcctgcac gtcacgctga tggaggacga cggcaccagt tggagcgcgg cagttccgct
     5821 ggacagcacc tggagcgagc ggtcactgcc gctggcggcc ttcactgtcg gccgcggtgt
     5881 gctgctgccc cagggattcc ccggcgcgtg gagctactgg gtgggccccg cggccggccg
     5941 gggtggcagc cgagatcgtc cgcagctcca ccggctggag cgacttcagc tgtccctgcg
     6001 gcgagagcaa ggggtcacgg tcccggcggg cagctacgga gtagaggtgg agtccatcac
     6061 cctttccaca accccttgaa tccagcccgt tgtagtcccg taacgaggta ggaacatcgt
     6121 ctcatcaggt gccagggcag tcccgaacgg aagttctcga tcatcaggac agccggtccc
     6181 tggttcatgc cataatgcca cttgcagacc caggctcgcc gcctgggaaa cctccttcca
     6241 tacgttggat tgaagcaggc cttgaaaccc atccgggtgg tcatctccgg gtacgtctca
     6301 cggagatgac gaataacggg atcgttgtcc gaagcatccg tctgattcgc ttcatccgcg
     6361 ccaacacaaa cgtcctggat cctggctatg cggcctacca ggagtaacgt gcgggcgcac
     6421 gcgctcttgg ggaaacaagt tggaacagca ctagctcggg ccgaacccaa acatggttcg
     6481 cgaccggtac cgctcgccgg gtctgagaat cgtcgctggg aagcgcggtt ggttgggcga
     6541 gtcggggtag tgctgggtct cgaggcagaa gcctgcgtgg cggcggtacg cgtagccgct
     6601 cttgcccgtg at
//
LOCUS       DASWKS010000191         7486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1574834, whole genome shotgun sequence.
ACCESSION   DASWKS010000191 DASWKS010000000
VERSION     DASWKS010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7486
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574834"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..3172)
                     /locus_tag="VGA78_05675"
     CDS             complement(8..3172)
                     /locus_tag="VGA78_05675"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9893391.1"
                     /translation="MFPTSADLTATLSAALGAQYRLDRELGRGGMGVVFLARDVTLDR
                     LVAVKVINPELAVNRTLADRFLAEARLIARLRHHNVVSVYSAGTADGLLYYVMDHVPG
                     ESLRDRLQREGRLDLATAATLVADIAAALDAAARAGVVHRDVKPENILIERTGSGARA
                     LLADFGIAHVMWEEAQTTGPGVAMGTPAYMSPEQAAGETVDARSDIYSLGVVAWEMLV
                     GRPPFEGPKRTVISRQIVDRPPSLEKARPEVPAHLADAIHRALEKVPDARWQTGEAFR
                     AAALGLDAPAAVRRSRRWGWRTGGAVTVAAVALISLIWALTRPGRPGSGIDPRHSYLV
                     VPFANLRADSTIGWLANGSVSMLDLALSQWRELRVVSNERVHDLLGRVGVTEGAVVGL
                     DRARQLAREAGVWTVVLGEFERTRDSLHLVARAFDVSTGARLEVAEVRGHLGDDVRPL
                     FDELAAKLLDLSGAPAAARTDLASVTSTSLEAYRSYLTGLEQLNRWNLVEAEQAFREA
                     VTIDSSFGLAYFRLAQTRGWISNAEDSLTRRYLSEATRHGDHLPSRERTRIAAYRGMI
                     EYDYHRAQALYGELVAGDSTDADAWYGLGDSWFHDVTHPDRAEAMTNSLRAFRQAVRL
                     DPHFVLAYEHMQAMLTQSARSDPSFVLLAGDRFAATHTKANSAALAPVTVNEAVARAR
                     RDAVALARNWTEFQPQTIRAHRALMEAYLAAGDTPGALAAIDRIRSLPEPSARSLAAF
                     LEARVRLMSGDGRTAASVLRQALPDVDPVVLRGNNLGQEVIFDILSGANTFAFVGDIE
                     GALAVIRLAEQLRRMILPPGAVVDAYGDDRVWAAGRMAALHAAVGSPPYELRELWRRV
                     STVARSATAAERPVLAWAGAAAAQGLLIGPAADAAAVAELQQLTGVAPRPEFTALAAL
                     SRGDSSEARQALAARPANPWRGESMKGMPDLNQGAAFAMGDSRPVAAEALFQLGNYRE
                     TVQLLESFQPERLATRGFDARWGLLARIRLLRGLAYEKLGQSDSATREFDQVVAQWDA
                     ADERLAPVVREARAGLARVRGAKG"
     gene            3455..4363
                     /locus_tag="VGA78_05680"
     CDS             3455..4363
                     /locus_tag="VGA78_05680"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9893392.1"
                     /translation="MTTRISRSQPTVAAVLLPAERPKVEAAGNGCFTIVHRDSVPDAV
                     RAVRERSVDALLLSVHRCEPAETDSIRQMLTSFPGLPTVALVSRPDPTASEVLLRLGA
                     SGVRDVIDVTAPAGWARLRQLLLEPASRPAARILGPLLERLPQVPPDTRLFLEVMIRL
                     APHTPTVRGVARVLEVQPSTLMSRFGRAGLPSVKRYLAAVRLLYAAQMLESTGLSIAD
                     VAYRLECSSPQSFSRHVRSLLGITCSEFRRRFPFPVALERFLSVMIDPYARVWAGFRP
                     LTAAPAGPRRDAIPDPRGEVRGGRRE"
     gene            complement(4459..5013)
                     /gene="pyrE"
                     /locus_tag="VGA78_05685"
     CDS             complement(4459..5013)
                     /gene="pyrE"
                     /locus_tag="VGA78_05685"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEX9893393.1"
                     /translation="MSSLDALIRLLRARSVRTGNFVLASGRQSSYYIDARLTTMSAEG
                     IHLIGQAGLAAIRQAGWEPAAVGGLTMGADPVAYAIAAASRESPPIIDAFSVRKDPKA
                     HGTKRRVEGNFGRGLSVVVTEDVITTGGSALQAIEAIREEGGVVLGVLAVVDREEGGS
                     AAIEEVGVSVVSLTTTSSLGLRLE"
     gene            complement(5010..5975)
                     /locus_tag="VGA78_05690"
     CDS             complement(5010..5975)
                     /locus_tag="VGA78_05690"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9893394.1"
                     /translation="MRAPLTCLPLIRTTGSFPAPSMSQDKLIGRTIGGYRLLQHVGEG
                     GTALVFRAEHPERGKAAVKILRGRQAQDPVAVKRFLREGEFGVRAGAHPNIIRTLDFG
                     EEEGLYYLALEWAEGEPLANFLAASGRLAPPLAGRIIRQLGNALEVAHRAGIIHRDLK
                     PANIMYDPASQTARLLDFGIARSSEDNPEQRLTRAGFFVGTLQYVAPEALSGELVGEQ
                     ADVYSLATIAYHLLTNKLPYVGRTPRELFQQLLTQPPIPLSQAVDGVQFNPVLEAVVM
                     KGLERELGKRWKTITEFASAFEAAATALDDDKKAGFLSRLFGRGT"
     gene            6115..7446
                     /locus_tag="VGA78_05695"
     CDS             6115..7446
                     /locus_tag="VGA78_05695"
                     /inference="COORDINATES: protein motif:HMM:NF040439.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEX9893395.1"
                     /translation="MLLLLACGGGRQAEPGTRPAPTSAEQTLNDLFNLSALYQRMGRL
                     TGGSPLPFVGNLAYFAGRGDSTIVLLGLSLDNRTLSFQRSGRDFAARYRVEVGFARPD
                     QLPLRYTREEAVTVGTFQETQRADETVVFQQAFLLPPGQYTASVVVRDPSAGLFSRAE
                     SPVTVPALTAGTVGAPIVVYRARPRPDLWTEPDVVLNPRGTVAHGGDSLTVLVEAYGL
                     TGPTQVPFAMRDEQEKVLLQRDLEFEGGKAVEARVVQLSPETPSLGRLTVSVGAGEDE
                     KTTTALVSFSRTWVLTNYDNLLDLLRFYGYEDRLDALRKAQPGERAMLWRRFWVDTDP
                     NPNTPENEALDQYFTRVAIANERFREEGSGQGWRSDRGEVFVTLGPPDQELESPPGND
                     TRIVQWAYNEYRAVLTFTGQMGFSRLRLTPNSRAEFARLRALARQRQMARN"
BASE COUNT         1161 a         2666 c         2427 g         1232 t
ORIGIN      
        1 tcccccctca tccctttgcg ccgcgaaccc tcgccaatcc agcgcgagcc tcccgaacca
       61 ccggcgccaa tcgctcatcg gccgcgtccc actgcgccac cacctgatcg aactcccggg
      121 tcgccgagtc ggactggccc agcttctcgt acgccagacc gcgcagcagc cggatccgcg
      181 ccagcagtcc ccagcgggcg tcgaagccgc gggtggcgag ccgttccggc tggaacgact
      241 ccagtagctg caccgtctcc cgataattcc ccagctggaa cagcgcctcc gctgccaccg
      301 gccgcgaatc tcccatcgcg aacgccgcac cctggttgag gtccggcatc cccttcatcg
      361 attccccccg ccagggattg gccgggcgtg cggccagggc ctggcgcgcc tcactcgagt
      421 cgccccggct gagtgccgcg agggcggtga attcgggccg gggcgccacc ccggtcagct
      481 gctgcagctc cgccactgcg gcggcgtcgg ccgcgggccc gatcagcagt ccttgcgcgg
      541 cggccgcgcc ggcccacgcc agaaccggac gttccgccgc ggtcgcggaa cgcgccacgg
      601 tggagacccg gcgccagagc tcccgcaact cgtagggggg actgcccacc gccgcgtgca
      661 gcgcggccat ccggcccgcg gcccacaccc ggtcatcgcc atacgcgtcc acgaccgctc
      721 ccggcgggag gatcatgcgt cgcagctgtt ccgccagccg gatcaccgcc aacgcgccct
      781 cgatgtcccc cacgaacgcg aaggtgttgg ctccggacag gatgtcgaag atcacttcct
      841 ggcccaggtt gttcccccgc agtaccaccg ggtcgacgtc ggggagggcc tggcgcagca
      901 cgctcgcggc ggtgcgtccg tcgcccgaca tcaggcgcac ccgcgcctcc agaaaagccg
      961 ccagactgcg cgcactgggc tcgggcagcg atcggatccg gtcgatggcc gccagtgccc
     1021 cgggggtgtc gccggcggcg agataggcct ccatcaacgc ccggtgagcc cggatggtct
     1081 ggggctggaa ctcggtccag ttccgggcca gcgccaccgc atcgcgccgg gcccgcgcca
     1141 ccgcctcgtt cactgtgacg ggcgccaggg ccgcgctgtt ggctttggtg tgggttgcgg
     1201 cgaaacgatc gcccgccagc agcacgaacg aggggtcgct ccgggccgat tgcgtgagca
     1261 tcgcctgcat gtgctcatac gccagcacga agtgggggtc cagcctcacc gcctggcgaa
     1321 aggcgcggag cgagttggtc atcgcctccg cccggtcggg gtgggtcacg tcgtggaacc
     1381 aggaatcccc caggccgtac caggcgtctg catcggtgga atcgcccgcc accagctccc
     1441 cgtacagcgc ctgggcccgg tgatagtcgt actcgatcat gccgcggtag gccgcgatcc
     1501 gggtccgctc ccggctcggc agatggtcgc cgtggcgggt cgcttcggac aggtagcgcc
     1561 gggtcaacga atcctcggcg ttgctgatcc agccccgggt ctgggccaga cggaagtagg
     1621 ccagaccgaa gctgctgtcg atggtcaccg cttcgcgaaa ggcctgctcc gcttccacca
     1681 gattccagcg attgagctgc tccagcccgg tcaggtagct gcggtaggcc tccagcgacg
     1741 tgctggtgac gctcgcgaga tcggtccggg ccgctgcggg cgcaccggac aggtcgagca
     1801 gcttggcggc tagctcgtcg aacaacggcc gcacgtcatc tcccagatgg ccccgcacct
     1861 cggccacttc cagcctggcg ccggtggaca cgtcgaaggc ccgcgccacc agatggagcg
     1921 agtcgcgggt ccgttcgaac tcgcccagca ccacggtcca gaccccggct tcgcgagcca
     1981 gctgtcgcgc ccgatcgagc cccaccacgg cgccttcggt caccccgacc cgccccagca
     2041 gatcgtgcac ccgctcgttg ctgaccaccc tgagctcgcg ccactgcgac agcgccagat
     2101 cgagcatgct cacgctgccg tttgccagcc atccgatggt gctgtcggcc cgcaggttgg
     2161 cgaacggcac gaccaggtag gagtggcgcg gatcgattcc ggagccgggc cggcctggtc
     2221 gggtcagcgc ccagatcaac gagatcagcg ccaccgccgc caccgtcacc gccccgccgg
     2281 ttcgccatcc ccaacgccgc gatcgccgta ccgcggccgg cgcgtccagc cccaatgccg
     2341 ccgcccggaa cgcctcgccg gtttgccagc gcgcgtcggg caccttctcg agcgcgcgat
     2401 gaatggcgtc ggccaggtga gccggtacct cgggccgggc cttttccagg ctggggggcc
     2461 ggtcgacgat ctggcgcgag atgacggtgc gcttgggacc ctcgaacggt ggccggccca
     2521 ccagcatttc ccacgcgacc acgcccagcg agtagatgtc gctccgggcg tccaccgtct
     2581 ccccggcggc ctgctccgga ctcatgtagg ccggggtgcc catcgccaca cccgggccgg
     2641 tggtttgggc ctcttcccac atgacgtgcg caatgccgaa atcggccagc aacgcccgcg
     2701 cgcccgagcc ggtgcgctcg atcaggatgt tttccggttt gacgtcacgg tgcactacgc
     2761 cggcccgcgc ggccgcgtcc agcgcggccg cgatatcggc caccagggtt gccgcggtcg
     2821 ccaggtccaa cctgccttcg cgctgcagcc ggtcccgcag actctccccc gggacgtgat
     2881 ccatcacgta gtagagcaat ccatcggcgg tgcccgccga gtacaccgaa accacgttgt
     2941 gatgccgcag acgggcgatg aggcgggctt cggcgaggaa acggtcggcc agcgtgcggt
     3001 tcacagccag ttcgggattg atgaccttca ccgccaccag gcggtcgagc gtgacgtccc
     3061 gcgccaggaa caccaccccc atgccgcctc gccccagctc ccggtccagc cggtactggg
     3121 cgccgagcgc cgcactgagt gtcgcggtaa ggtcagccga ggtcggaaac acgtctactc
     3181 tgtctcctga ggtagggagc agggagcagg gagctggtag ccgggagccg ggagtgagat
     3241 agagaccaac tgagagccgg acgcctgccc tgctgcctgc tccctgcttc ctgctccctt
     3301 tttcctgctc cctgctccct tctccccgct ccctgtttgg tttggtaatg ttacaagacg
     3361 aacaacgttc tcgaagggtt gcaaccccgc tcggttgaga gccgtttcat tgccctgccc
     3421 taccttgccc ctcgtaatcg cccgtggggc cccattgacg acccgcattt cccgctctca
     3481 acctaccgtg gccgccgtgc tcctgccggc cgagcgccct aaggtagagg ccgccggcaa
     3541 cggatgtttc acgatcgtgc accgggactc cgtgccggat gccgttcgag cggtccggga
     3601 gcgcagtgtc gacgcgctgc tcctgtcggt ccatcgctgc gagcccgccg aaaccgattc
     3661 catccgccag atgctgacgt ccttccccgg cctgcccacg gtcgcgctgg tcagccgacc
     3721 cgaccccacc gcgtccgagg ttctgttgcg actgggagcc tcgggggtcc gcgacgtgat
     3781 tgacgtgacc gccccggcgg ggtgggcgcg attgcgccag ctgctgctgg agccggcctc
     3841 gcgtcccgcc gcccggatcc tgggtccgct cctggaacgt ctgccccagg tcccccccga
     3901 cactcggctg ttcctggaag tgatgatccg gctggcaccc cacaccccga ccgtcagagg
     3961 cgtggcccgc gttctcgagg tgcagcccag taccctgatg tcgcgctttg gccgggccgg
     4021 cctgccctcg gtcaaacgct acctggcggc ggtgcggctc ctctacgccg cccagatgct
     4081 cgagagcacc ggtctttcca tagcagacgt cgcctaccgg ctggagtgct catcacccca
     4141 gagtttcagc cgtcatgtgc ggtcgctgct ggggatcacc tgctccgaat tccggcggcg
     4201 attcccgttc ccggtcgcgc tggaacggtt tctctcggtg atgatcgatc cctatgcccg
     4261 ggtttgggct ggctttcgac cgctcaccgc ggcgccagca ggtccccggc gcgatgcgat
     4321 ccctgatcca aggggtgagg tgaggggtgg gaggagggaa tgaactggag agtgcgtaat
     4381 gcccaatgcc catagcagag gtagggtaga ggggccgaac ccctctgcaa tgggcattgg
     4441 gtattcggca ctctgcattc actccaacct cagacctaac gaagaagtag tagtaagaga
     4501 gaccacgctc acgcctacct cctcaatcgc cgcagagccg ccttcctcgc gatccacgac
     4561 tgccaggaca cccagcacca cccctccttc ttcccggatc gcctcgatgg cctggagcgc
     4621 ggacccgccg gtggtgatga catcttccgt caccactacc gagagtccgc ggccgaaatt
     4681 gccctccacc cgtcgtttgg tgccatgcgc cttcgggtcc ttccggacac tgaaggcgtc
     4741 gatgatcggg ggcgattccc ggctggcggc agcgatcgcg tacgccaccg gatccgcccc
     4801 catggtgaga ccgcccaccg cggccggctc ccaccccgct tggcggatcg ccgccagacc
     4861 agcctggccg atcaggtgaa tcccctcggc ggacatggtg gtgagccgag catcgatgta
     4921 gtaggaggac tgccgcccgg atgcgaggac aaagttgccg gtgcgaaccg accgggcccg
     4981 gagcagccga atcagggcgt cgagcgagct cacgtcccgc ggccgaagag ccgcgacagg
     5041 aatccggcct tcttgtcgtc atcgagtgcc gtggcggcgg cttcgaaggc gctggcgaat
     5101 tcggtgatgg tcttccaccg cttgccgagc tcccgctcca gccccttcat gaccacggct
     5161 tccaggaccg ggttgaattg gaccccatcc acggcctggc tcagcgggat aggtggctgt
     5221 gttagtagtt gctgaaacaa ctcccttggt gtgcgaccca catatgggag tttgttggtg
     5281 agcaagtgat aggcgatggt ggccaggctg tagacgtccg cctgctctcc caccagttca
     5341 ccgctcaggg cttccggagc gacgtactgc agggttccca caaagaagcc ggcccgggtc
     5401 aggcgctgtt ctggattatc ctcggaactc ctggcaatcc cgaagtccag cagccgggcc
     5461 gtctggctgg cggggtcgta catgatattg gcaggcttga ggtcgcggtg gatgatcccg
     5521 gcccggtgcg ccacctccag cgcgttcccg agctgccgga tgatccggcc cgccagcggt
     5581 ggcgccaacc ggcccgacgc ggccaggaaa ttggccagcg gctcgccttc cgcccactcc
     5641 agcgccaggt aatacagccc ttcttcttca ccgaaatcga gagtccggat gatgttcggg
     5701 tgcgccccgg cgcgaacccc gaactcccct tccctgagga agcgcttcac agccaccggg
     5761 tcctgagcct gccggccgcg cagaatcttc acggcggcct tgccccgctc agggtgttct
     5821 gcccggaaga ccaacgcagt gccgccctcc cctacatgtt ggagaagtcg gtaaccgcct
     5881 atggtacgtc cgatgagttt atcttggctc atggagggtg ccgggaaact acccgtcgtc
     5941 cggatgagcg gcaagcaggt taatggtgct cgcatgcccc ggttcgggcg tctccctcac
     6001 accttagcga acgcagagtg cagaatgcag accgcagatt tcaagaggaa actgatacgg
     6061 tggccgggac gggcccctcg gcattccgta ctctgcattc tgcagcccgc agtcgtgctc
     6121 cttcttctcg cgtgtggcgg aggaaggcag gccgagccgg gcacccggcc cgctcccacg
     6181 tcagccgagc agaccctcaa cgacttgttc aacctttccg ccctctatca gcggatgggg
     6241 cgcctcaccg gcggcagccc gctgccgttc gtgggcaacc tggcctactt cgccggtcgg
     6301 ggtgattcca ccatcgttct gctgggactg tcgctcgaca accgcacctt gagcttccag
     6361 cggtcgggac gggatttcgc ggcccggtat cgggtggaag tcgggttcgc ccgccccgat
     6421 cagctgccgc tgcgctacac ccgggaggaa gccgtcaccg tcggcacctt ccaggagacc
     6481 cagcgggccg atgagaccgt ggtcttccag caggcgtttc tcctgccgcc gggtcaatac
     6541 accgcgtcgg tggtggtgcg cgatcccagc gcgggcctct tcagccgggc cgagtccccg
     6601 gtgacggtgc ccgcgctcac cgcgggaacg gttggggcgc cgatcgtggt gtatcgcgcc
     6661 aggccccggc ccgatctctg gaccgagccc gacgtcgttc tcaacccgcg cggcacggtc
     6721 gcgcacgggg gcgattcgct cacggttctg gtggaggcct acggactcac cgggcccacc
     6781 caggtcccgt tcgcgatgcg cgacgaacag gagaaggtgc tgctgcagcg cgacctcgag
     6841 ttcgagggcg gcaaggcggt ggaagcgagg gtggtgcagt tgtcgcccga aacgccgtcg
     6901 ctgggccgcc tcaccgtatc ggtcggggca ggggaggacg agaagaccac cacggcgctg
     6961 gtctcgttct cccgcacctg ggtgctcacc aactacgaca acctgctcga tctgttgcgg
     7021 ttctacggct acgaggaccg gttggacgcg ctccgcaagg ctcagccggg cgaacgagcc
     7081 atgctgtggc gccgcttctg ggtggatacc gatcccaatc ccaatacgcc cgagaacgag
     7141 gccctggacc aatacttcac gcgggtggcc atcgccaacg agcggttccg cgaggaaggc
     7201 tcggggcagg gatggcggag cgatcggggt gaggtcttcg tgacgctggg gccgcccgac
     7261 caggagctgg agtcaccgcc cggcaacgac acccggatcg tgcagtgggc ctacaacgaa
     7321 taccgcgccg tactcacctt caccggtcag atggggttct cccgcctgag actcacgccc
     7381 aactcgcgcg ccgaattcgc ccggttgcgg gcccttgcgc gtcagagaca aatggctcgt
     7441 aactgagggg tgaggtgggg aggtgtgagg ggggagtgaa tgcaga
//
LOCUS       DASWKS010000192         4670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1575373, whole genome shotgun sequence.
ACCESSION   DASWKS010000192 DASWKS010000000
VERSION     DASWKS010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575373"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1363
                     /locus_tag="VGA78_05700"
     CDS             <1..1363
                     /locus_tag="VGA78_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893396.1"
                     /translation="ASAMVQDRGPGVVERFHRVLRDRERQLAADPGHRPSIPRSPPPA
                     TPPPEVGSERKFAVCKNTDCNTFDTVTAVARSVGTKVAVYMDSTVPTADSLTQADLDD
                     LKRLFDLYHYPIDNNAFGAESDLDNNGVVIVLLTDAVNALTPDCSQGRILGYFFGGDL
                     LNITGSNHGEVFYAMVPVPATATCTAATRAQTLVRLKPTLIHEFQHMISFNQHVLVRG
                     GNVEETWLNEGLSHFAEELGGRLIPNEDCVGSPSCRSQYVSGDLLNAYDFMENTEAHF
                     MVGPDNSTGTLEERGAVWLFTSWLTDQFGTDADGTNVTRALVQTNRMGATNVAAVTGV
                     AFSTLIPEWMLAIYLDDLPGFTPQSERLTFSAWGLRAVFEANCCTPTSPFAQAFPFSP
                     VNTTGSSSFQRTGTLRGGSGRHFRATQAAGSGALDILISRTPGGPVLDATLEPRVGIV
                     RIR"
     gene            1670..2536
                     /locus_tag="VGA78_05705"
     CDS             1670..2536
                     /locus_tag="VGA78_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893397.1"
                     /translation="MVTGAVVMVMVLVVTAPLPGQTAATPELEGLPPAVRSAGMGGTS
                     VSLIGYAGSVFTNPAGLGPIRVLSLEGVASRLDSSTYLAGSAAMRIGRLNLGGGVRYL
                     RFDDGQALYDNVESAAALTLRVMGVALGAGATYYSIEDSAGAIRRTLTASTALTLAFF
                     DIMALAVTARNLGEWPVTGEQLDLPTRVAIGFNMNLVDTYSNWRLLAAIERSWTDGEG
                     ATHVGLEGGAVVYGIGIVARAGSGGHRDGGVFSNATFGGSLVLGRGALDYAYLDRRGA
                     RPLHLFGLRWTP"
     gene            2533..3612
                     /locus_tag="VGA78_05710"
     CDS             2533..3612
                     /locus_tag="VGA78_05710"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEX9893398.1"
                     /translation="MRRRIGMGILFVALGLFVGYGTAWLASDEVRYLTRAAAEEARIL
                     ERRRSLEAVIQDPRTDGATRGLLTLVREVRGYADTLGLEAGDTYTSYSDVGRDTLLLV
                     LTAAPKDCVCPHIWKYPIVGRVPYKGFFDPRMAQKAASQLEQRGLDVNLRPSGAFSTL
                     GWFNDPLLSTALSRDSLELAVTVFHELAHNTLWVQGAAAFNESFAQYAGYRSAEAFFR
                     SRGDTLQAHRAAERWSDEQVLAEYYRELLARVDSFYQARPDSAALDSGRVALGRWARD
                     QLAGPVAAQLRTFEIGPLADRPINNARLIGVLIYRTNLAWFEAWHRRQQSDVSRALAG
                     LRELLKEAEGDSAFARLERAVSPER"
     gene            3687..4592
                     /locus_tag="VGA78_05715"
     CDS             3687..4592
                     /locus_tag="VGA78_05715"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX9893399.1"
                     /translation="MLAFLVIYLIWGSTFLAMRSAVAEIPASILVCIRCFGGAAILLG
                     WARWQGGGSSRADWTGSMIAGGLFFLTGQGLLAYGLRFIPSGTSAVFLATIPLWIVLF
                     GALIDRRAPSWLTMVGCVVGLAGVAILALIRVEGGLEEWSPLGTAALLLSSVSWAAGT
                     EFSRRRRTSEDPLSRTGRQLLCGGVFLLAVAVLKGDLAAWSPTQIGAETIGAMVFLIV
                     CGTALGFGAYSWLLRVVRPAVVSTYAFVNPVVALILGWALAGEPLTPVLLGASGVVLA
                     AVAIVILSPSSEQGAGSREQGAGSR"
BASE COUNT          716 a         1512 c         1611 g          831 t
ORIGIN      
        1 ggcttcggcg atggtccagg accgcggtcc gggggtggtg gagcgatttc accgggtcct
       61 gcgggatcgg gagcggcagc tggcggcaga tcccggccac cggccctcga ttccgcgttc
      121 tccgccgccc gcgactccac caccggaggt cgggtcggag cggaagttcg ccgtttgcaa
      181 gaacaccgac tgcaacacct tcgacaccgt gacggcggtc gcccgatcgg tcgggaccaa
      241 ggtcgcggtg tacatggata gcaccgtgcc gacggcggac tcgttgaccc aggccgacct
      301 ggacgatctg aaacgcctgt tcgacctgta ccattatccg atcgataaca atgccttcgg
      361 cgccgagtcg gacctcgata acaacggagt cgtcatcgtc ctgctcaccg atgccgtgaa
      421 cgcgttgaca cccgattgca gccagggtcg gattctgggg tatttcttcg gcggcgacct
      481 gctcaacatc accggttcca accatgggga ggtgttctac gccatggttc ccgttccggc
      541 cactgcgacc tgcactgcgg ccacccgggc ccagaccctg gtgcgcctca agcccacgct
      601 gatccacgag ttccagcaca tgatcagctt caaccagcac gtgctggtgc gaggcggcaa
      661 cgtggaggag acctggctca acgagggcct cagtcacttc gccgaggagc tgggcgggcg
      721 gttgatcccg aacgaggatt gcgtggggtc gcccagctgc cgcagccagt acgtgtcggg
      781 cgatctgctc aacgcctatg atttcatgga gaacaccgag gcccatttca tggtgggccc
      841 cgacaattcg accgggacgc tggaggaacg gggcgccgtc tggctcttca ccagctggct
      901 caccgatcag ttcggcaccg acgccgacgg caccaatgtg acccgcgccc tggtgcagac
      961 caaccggatg ggcgccacta acgtcgcggc cgtcacgggc gtggcgttct cgaccctgat
     1021 accggagtgg atgctggcga tctatctcga cgatcttccc ggcttcaccc cccagagcga
     1081 acgcctgacc ttcagtgcct ggggattgcg ggcggtgttc gaagccaact gctgcactcc
     1141 caccagcccg ttcgcccagg cgtttccgtt ctctccggtc aacaccaccg ggtcgtcctc
     1201 cttccagcgg accgggaccc tcaggggtgg gagcgggcgg catttccggg ccacccaggc
     1261 cgccggttcg ggcgcgctgg acattctgat ctcgcggacc ccgggtgggc cggtgctgga
     1321 tgccactctg gaaccgcggg tggggatcgt gcgaatccgg taacaagaag cagggagcag
     1381 gaagcaggga gcagggagca ggaagcaggg agcaggaagc agggagcagg aagcagggag
     1441 caggaagcag ggagcaggga gcaggaagca ggagcaggaa gcagggagca gggagcagga
     1501 agcagggagt gggaagcagg gagcaggagc agggagcagg aagcaggcgg cccctcctcg
     1561 gattgcagcg gtgaccacgc acccggtctc atcgggagat ttctcaattc cggcttcctg
     1621 ttccctgctt cctgcttcct gctcccttct ccctgctcga cgtgctcgtg tggtgaccgg
     1681 ggccgtggtg atggtgatgg tgttggtggt cacggctcct ctccccggcc agaccgctgc
     1741 gactccagag ctcgagggcc tgcctccggc ggtgcgaagc gccggcatgg gcgggaccag
     1801 tgtgtccctc atcggctacg cgggttccgt gttcaccaat ccggcggggc tgggtccgat
     1861 ccgggtgctg agtctggagg gggtcgcttc ccggctcgat agctccacct atctcgccgg
     1921 ctcggccgcg atgcggatcg gacggctcaa tctcggaggt ggggttcgct atctgcggtt
     1981 cgacgacggc caggcgttgt atgacaatgt cgaaagcgcg gccgcactca ccctgcgcgt
     2041 catgggcgtg gccctgggcg ccggcgccac ctactactcg atcgaggaca gcgccggcgc
     2101 cattcgccgc accctgaccg cctccaccgc gctcaccctg gccttcttcg acatcatggc
     2161 gctcgcagtc acggcccgca atctgggcga atggccggtc accggtgagc agctggatct
     2221 ccccacccga gtggcgatcg gcttcaacat gaatctggtc gacacctact ccaactggcg
     2281 cctgctggcc gcgattgagc gcagttggac cgacggcgag ggcgccaccc acgtcggtct
     2341 ggagggcgga gcggtggtct acggcatcgg gatcgtggcg cgggccggat ccggcggcca
     2401 ccgcgacggc ggcgtgttca gcaacgccac cttcggtggc agtctggtgc tgggccgggg
     2461 ggcgctcgac tacgcctatc tcgaccggcg gggcgcccga cccctgcatc tgttcggttt
     2521 acgctggact ccatgaggcg gcggatcggc atgggcattc tcttcgtggc gttgggactc
     2581 ttcgtcggat atgggaccgc ctggctcgcc agcgacgagg tgcgctatct cacccgtgcc
     2641 gccgccgagg aagcccggat cctggaacgg cgccgctccc tcgaggccgt catccaggac
     2701 ccccgcacgg atggcgcaac ccgcggcctc ctgacgctgg tacgcgaagt gcgcggctac
     2761 gccgatactc tgggcctgga agcgggcgac acgtacacca gctatagcga cgtcggtcgg
     2821 gacacgttgc tgttggtgct caccgccgca cccaaagact gtgtctgccc tcatatctgg
     2881 aagtacccga tcgtcgggcg ggtgccgtac aaagggttct tcgatccgcg catggcccag
     2941 aaggcggcct cgcagttgga gcagcgtggt ctcgacgtca atctccggcc atccggcgcg
     3001 ttctctactc tcggctggtt caacgatccg ctgctctcga ccgccttgtc ccgcgactcg
     3061 ctcgagctgg cggtcaccgt cttccacgag ctggcgcaca acaccctctg ggtccagggc
     3121 gcggccgctt tcaacgaaag cttcgctcag tacgccggct accgatcggc cgaggcgttc
     3181 ttccgctcgc ggggcgacac cctgcaagcc caccgggccg ccgagcgctg gtcggacgag
     3241 caagtcctgg ccgagtacta ccgggaattg ctggcgcggg tggactcgtt ctatcaggct
     3301 cggcccgatt cggccgccct cgactcggga cgggtggcgc tgggtcgttg ggcccgggac
     3361 cagttggctg gaccggtcgc ggcgcagcta cgcactttcg aaatcggccc cctcgccgac
     3421 cgtcccatca acaacgcccg gctgatcggc gtgctgatct accgcaccaa cctggcatgg
     3481 ttcgaggcct ggcaccggcg acagcaaagc gacgtgagcc gggcgctggc cgggctccgt
     3541 gagctcctca aggaagccga aggcgacagc gcgttcgccc ggctggagcg ggccgtgagc
     3601 cctgaacggt gagtcgggag gcgggaggcg ggagacgacc actgggagaa ccccgcctcc
     3661 cctctgctcc ctcccgtctc cctgtcgtgc tcgcgttcct cgtcatctac ctcatctggg
     3721 gatcgacttt tctcgccatg cgatctgcgg tggcggagat tccggcgtcc atcctcgtgt
     3781 gcattcgctg cttcggcggc gccgcgatcc tgctggggtg ggcccgttgg cagggtggcg
     3841 ggtcgagccg ggccgactgg accggttcga tgatcgcggg cggactcttc ttcctcaccg
     3901 gtcaggggtt gctcgcctac ggtctccgat tcattccctc gggcacttcg gcggtctttc
     3961 tggccaccat cccgctctgg attgtgctgt tcggtgcgct gatcgatcgc agggcgccct
     4021 cctggctcac catggtcggg tgcgtggtgg gcctcgccgg tgtcgctatt cttgccctga
     4081 tccgggtcga gggtggactg gaagagtgga gcccgctggg gactgctgct ttgctgctta
     4141 gctcagtgtc ctgggccgcc ggcaccgaat tcagccggag gcgtcggaca tcggaagacc
     4201 ctctctcgcg caccggcagg caattgctgt gcgggggcgt gttcctgctg gccgtggcgg
     4261 tgttgaaagg cgatctcgcc gcctggtcac cgactcagat cggcgcggag acgatcgggg
     4321 cgatggtctt cctgatcgtg tgcggaacgg ccctgggctt cggcgcctat tcctggcttc
     4381 tccgggtggt gcgtcctgcc gtggtgagca cctacgcctt cgtgaacccg gtggtcgcgt
     4441 tgatcctggg ctgggctctg gcgggagaac cgctgacacc ggttctgctt ggcgcgtcgg
     4501 gggtcgtcct cgcagcagtg gccatcgtca tcctgagccc ctcgtctgag cagggagcag
     4561 ggagcaggga gcagggagca gggagcaggt agcagggagc agggagcagg tagcagggag
     4621 caggtagcag ggagcaggga gcagggagca gggagcaggg agcagggagc
//
LOCUS       DASWKS010000193         3434 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_88613, whole genome shotgun sequence.
ACCESSION   DASWKS010000193 DASWKS010000000
VERSION     DASWKS010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88613"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VGA78_05720"
     CDS             complement(<1..278)
                     /locus_tag="VGA78_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEX9893400.1"
                     /translation="MKIGLVGFAGSGKTTVFNTMTGLHVPVGYGGELRFGTVRVPDPR
                     IDALSRIFSPKKTTYAEINFCDIPGEHGADHKGLSVKALQQIREQDAL"
     gene            complement(762..1112)
                     /locus_tag="VGA78_05725"
     CDS             complement(762..1112)
                     /locus_tag="VGA78_05725"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893401.1"
                     /translation="MHTRLGSLLAATFLTVVAAPARSQVPTDSATVAGRVARYLQPMA
                     EAGALSGVVLLARGDTVLYQGAFGWADRPGGRRMTVNTPSAVASISKPLTGIIVAGLV
                     AQGRLSLDDRLNRC"
     gene            complement(1122..1274)
                     /locus_tag="VGA78_05730"
     CDS             complement(1122..1274)
                     /locus_tag="VGA78_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893402.1"
                     /translation="MRTMTRRQGIGAAVLTALTLAAILAAGCGSSSGGFTEPPPARET
                     PAQRPA"
     gene            complement(1427..2107)
                     /locus_tag="VGA78_05735"
     CDS             complement(1427..2107)
                     /locus_tag="VGA78_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9893403.1"
                     /translation="MARVLVIEDNPDLAYGLRNNLEIEGHQVTVAGDGREGLTLAVQG
                     NVDLVILDLMIPGLDGFRVLRALRERDRETPVLILTARGEEADKVRGLKLGADDYVTK
                     PFGILELLARVEAQLRRREAARGPREVVTFGPIEVDRNARVVRRDGLPVSLAPKELDL
                     LFALLDARGAAVSRATLMDQVWGYQADVLSRTVDSHVAELRRKLEGDPGRPRHIFTVR
                     KFGYRLEQ"
     gene            complement(2109..>3434)
                     /locus_tag="VGA78_05740"
     CDS             complement(2109..>3434)
                     /locus_tag="VGA78_05740"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9893404.1"
                     /translation="GADTTVWRVLGDGMTVFRMTPAGPLETWGADVEPAARSQLADSL
                     PARAGAVLSPKAYFALFWPHGTAENTVAAFNVGRDTAGSTGVIYGFLVRTSALPALVV
                     PVLTRAPLLPPSLTGGTRLDSAVAYRILGPDGSALVESLAAPGSGFVASRVLDPMWGG
                     LRIEVALRPSLASQLVIGGVPRSRLPLVLALLALTTLLVVTAAIQLRRERELARFREE
                     FVAGASHELRTPLAQIRLFTETLRLGRVRSEAERDRSFEIIDQETRRLSHLVENLLYV
                     SRAGRGVLTVSPRVRDVAAELRDAVEGFGPIASARRASVSLDAPERLDARVDGDAFRQ
                     IVLNLLDNAVKYGPQGQTVTVHLARADGRIRLTVDDQGPGVPLRERGRVFERYVRLER
                     DREANTAGTGLGLALVQELARLHGGRAWAEAAPGGGARLVVEWPWSVEA"
BASE COUNT          562 a         1205 c         1139 g          528 t
ORIGIN      
        1 cagagcgcat cctgctcccg gatctgctgc agcgccttga ccgagagccc tttgtggtcc
       61 gcgccgtgct ccccgggaat gtcgcagaag ttgatttcgg cgtaggtggt cttcttgggc
      121 gagaagatcc gggacagggc gtcgatgcgc gggtccggga cccgcacggt accgaaccgg
      181 agctctccgc cgtagccgac cgggacgtgg agccccgtca tggtgttaaa gacggtcgtc
      241 ttccccgagc ccgcaaatcc aaccaatccg attttcatgc cagtatgata ctgcggtcgc
      301 gctcgccggg atctcccggc gggcccggtc cggccgcaag ggagggcacg ctgggagccc
      361 tgtgaaaccg cgatcttctc cgacgacctg gcggcggacg ttcgccagga ttggcgcgtt
      421 ctagtgggcg acggctatca ccgggttcgc gatcgctccc ggccgggcct tacctagccc
      481 cggggcacgg caacagctat ccgcagatga cgcggattac gcggagaaca aacccatcgg
      541 tttgcttttc gtgctgtttg tttttgctgt tgttatccgt gtaatccgcg taatctgcgg
      601 ataaccactt gcaagaaatc gatgcgccgc aatcaaaggg accatcgagg ccgcggtccg
      661 gggctcggtc tcctggtcgg ctcgagtgac ccggtggcgg acgccggcgc gatgactcat
      721 cagcatgtcg atcgtgatct gatccgccga gggaaaatcc gtcagcagcg attgagccga
      781 tcgtcgagcg acagtcggcc ctgcgccacc agtccggcga cgatgattcc ggtcagcggc
      841 ttggagatcg aggccacggc gctgggcgta ttcaccgtca tccgtcggcc gccgggccga
      901 tcggcccagc cgaaagcccc ctggtacagc accgtgtcgc ctcgcgccag cagcaccacc
      961 ccggacaacg cgccggcctc tgccatcggc tggagatagc gcgcgactcg gcctgccacg
     1021 gtggcggaat cggtggggac ctgcgaacgg gccggtgccg ccacgaccgt gaggaacgtg
     1081 gcggcgagga ggctgcccaa cctggtgtgc atgagcaact cctacgccgg cctctgggcc
     1141 ggggtttccc tggctggtgg tggctcggtg aatccgccgg aactggagcc acagccggcg
     1201 gcgaggatcg ctgccagcgt cagagcggtc agaacggctg cgccgatccc ctggcgtcgt
     1261 gtcatggtgc gcatcggtct ctccgggtca gaacgtgggt gaactgctgg ggacggcacc
     1321 cacattagga acccggatca accggaggtc acctcgaaat catcgcctgg ccattgcgac
     1381 tatctccaaa gggcagaacc acatgcggcg tgcctcagtg agctcctcac tgttccagcc
     1441 ggtatccgaa tttccggacc gtgaagatgt gacggggtcg gccggggtct ccctcgagct
     1501 tgcgcctgag ctcggccacg tggctgtcca ccgtgcggct cagcacgtcc gcctgatagc
     1561 cccacacctg gtccatcagc gtcgcccggc tcaccgcagc tccccgggca tcgagcagcg
     1621 cgaacagcag gtccagctcc ttcggcgcca ggcttaccgg cagcccgtca cgccggacta
     1681 cccgggcgtt gcggtcgacc tcgatggggc cgaatgtgac cacctcgcgg ggcccccggg
     1741 cggcctcgcg ccggcggagt tgggcctcga cccgcgccag aagttccagg atcccgaagg
     1801 gcttggtgac gtagtcgtcg gcgccgagct tgaggcctcg caccttgtcg gcttcctctc
     1861 cccgggcggt gaggatcagc accggggtct cccggtcgcg ctcccgcagc gcccgcagga
     1921 cccggaatcc atcgagtccg ggaatcatga gatcgagaat caccaggtcg acgttgccct
     1981 gtaccgccag ggtcagtccc tcccgcccgt caccggcgac cgtcacctgg tggccttcga
     2041 tctccagatt attgcgcagc ccataggcga gatccggatt gtcctcgatc accagcacgc
     2101 gggccatctc acgcctccac ggaccagggc cactcgacca ccaaccgcgc tccgcctcct
     2161 ggcgccgctt cagcccaggc ccgcccgccg tggagccggg ccaattcctg taccagggcg
     2221 agtccgaggc cggtccccgc cgtgttcgcc tcacggtccc gctcgagccg gacatagcgt
     2281 tcgaagaccc gcccccgctc ccggagcggc acgcccggtc cctggtcgtc caccgttagg
     2341 cgtatccggc cgtcagcgcg ggcgaggtgc acggtgaccg tctggccctg gggcccatac
     2401 ttgaccgcgt tgtcgagcag gttgagcacg atctgccgga aggcgtcgcc atccacccgg
     2461 gcgtcgagcc gctcgggcgc atcgagagaa accgaggccc gccgagccga cgcgatcggc
     2521 ccgaatccct ccaccgcatc acgcagctcc gcggcgacat cgcgaacccg gggcgaaacc
     2581 gtcaacacgc cccgcccggc ccggctcaca tacagcaggt tctccaccag gtgactcagg
     2641 cgccgggtct cctggtcgat gatttcgaac gagcggtccc gctcggcctc gctccgcacc
     2701 cggcccagcc gcagggtctc ggtgaagagc cggatctgtg ccaggggggt ccggagctcg
     2761 tgcgaggcgc cggccacgaa ctcctcccga aaccgagcca gctcgcgttc ccggcggagc
     2821 tggatggcgg ccgtgaccac cagcaacgtg gtgagggcga gcagcgccag caccagcggc
     2881 agacgggacc gcggtacccc gccgatcacg agctgcgagg cgagcgacgg acgcagcgcg
     2941 acttcgatcc ggaggccacc ccacatcgga tcgaggactc ggctggcgac gaacccgctg
     3001 cccggggccg cgagggattc gaccagcgcc gacccgtcgg gaccgaggat ccggtaggcg
     3061 accgctgagt cgaggcgagt tcctccggtc aggctcggcg ggagcagcgg ggcgcgggtc
     3121 agcaccggga caaccagcgc gggcaatgcg gatgtccgca ccaggaaccc gtagatcact
     3181 ccggtggatc cggcggtatc gcggccgaca ttgaacgcgg cgaccgtgtt ttccgccgta
     3241 ccgtgaggcc agaacaaggc gaaataggcc ttgggggaga gcacggctcc ggcccgcgcg
     3301 ggcaaggaat cggccagttg ggaccgggca gccggctcaa cgtcggcgcc ccaggtctcg
     3361 agcggaccag ccggcgtcat ccggaacacc gtcatgccgt ctcccagcac gcgccagacc
     3421 gtggtgtccg cacc
//
LOCUS       DASWKS010000194         3254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3406456, whole genome shotgun sequence.
ACCESSION   DASWKS010000194 DASWKS010000000
VERSION     DASWKS010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3406456"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..430
                     /locus_tag="VGA78_05745"
     CDS             167..430
                     /locus_tag="VGA78_05745"
                     /inference="COORDINATES: protein motif:HMM:NF016268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEX9893405.1"
                     /translation="MGSQESSGKPAEHGVAFEEAVTAFADPHSITIPDPDHSAGEDRF
                     VPIGRSAVQRLLVVVHLERGERIRLISARLAARRERRTYEEDS"
     gene            465..668
                     /locus_tag="VGA78_05750"
     CDS             465..668
                     /locus_tag="VGA78_05750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893406.1"
                     /translation="MRAEYDFSGGERGKYAKRFGKGATMVVLDPDIADAFPTGADVNR
                     ALRAILDAVPKRSSRRSSIKKTT"
     gene            complement(895..2682)
                     /locus_tag="VGA78_05755"
     CDS             complement(895..2682)
                     /locus_tag="VGA78_05755"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HEX9893407.1"
                     /translation="MILLSACSDVVPSGPERISGPEAPAISSSTGTSATCVPIPSGLV
                     SWWTGDTDASDARGSNHGILRDGATAAAAGLVGGAFGLDGVDDFVEVPPSTSLDITGS
                     ITVLAWLNAASFGFHPSVIGKGNVGNYAESFALFVNPDGTTGFLVNSIGVPAGRAVLF
                     GGQLKAGDWHLLAGTYSAADNLIRLYVDDHLIAATGHSGGVHVTPDPVLIGKAERSGT
                     GFPTSFFHGLVDEVQLYDRALDAAELLAVHTAGPSGFCPDAPPPPPPPPPPVASAGGP
                     YDGVEGSALSFDGAASTDPAEQGLSFAWDFGDGVSGAGVAPAHAYGDNETYTVSLTVT
                     DVLGQVSSSTTTATIVNAAPTLGLVAAPVDPQPVGSSVGASVPFTDPGALDSHTAAFN
                     WDAEGVGATSAGAVVDGLATGSHVYTAAGVYTVGATVTDDDGGDGSALFQYVVVYDPT
                     AGFVTGGGHIASPAGSYTADPTLTGKAIFAFVSRYQTGASVPTGNTQFKFKAGSLDFS
                     STEYEWLVVAGARAQFKGSGMVNGLGHYRFLLTAMDGALPGGGGMDKFRIKLWDEATG
                     TVIYDNQLGGSDTDDPTTAIQGGSIVIHK"
     gene            complement(2802..>3254)
                     /locus_tag="VGA78_05760"
     CDS             complement(2802..>3254)
                     /locus_tag="VGA78_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893408.1"
                     /translation="EGVDGVGAHTSNVNGNLMLTVQQSATRRIGWVSTAGTGLSDDRL
                     YTNTHDNPGGDNACGLAGMANGSSGTAAFEFELLAGSTNSKKIIRYGKSCSGSAVSSE
                     RVTTTRSADGTTWTITGASGVHCDNGAKNKMVQVGTAGPFSMTLVKSD"
BASE COUNT          542 a         1043 c         1131 g          538 t
ORIGIN      
        1 caaatggggc gacggtaggg caagtcgccg gtggctctgg caactccggg aggcatggag
       61 gagctaaccc acgcaacccc agaggccagc ccagtcataa cttctaggtc gctctggtcg
      121 gtgccgtgtg gccgagggtg cctttgctga tggacattga gttcgaatgg gatcccaaga
      181 aagcagcggc aaacctgcgg agcacggggt cgcgttcgag gaggccgtga cggcgttcgc
      241 cgatccgcac tcgatcacca tcccggaccc ggaccattcc gctggggagg atcgattcgt
      301 cccgatcggg cgctccgccg tccagcggct cttggtggtg gtacaccttg aacgaggcga
      361 gcggattcgc ctcatcagcg cccgcctggc ggcgcggcgc gagcgacgga cctatgaaga
      421 agactcctaa ggccagcccg gggcgccgcg gtaaggttgc ggagatgcgt gccgagtacg
      481 atttcagcgg cggcgagcgc ggcaagtatg ccaagcgatt cggcaaaggg gccacgatgg
      541 tggtcctgga tccggatatc gccgatgcct ttcctaccgg tgcggacgtc aaccgggcac
      601 tacgcgccat tctggacgcg gtgccgaagc ggtcgtctcg gcgcagctcg atcaagaaga
      661 cgacctaacc cggaagctgt gttgttacct gtactggtgt ctccaagagg agtggagcta
      721 cgaggagtgg ctccgccagc atgaaaagct ggaggtgcgc ccggtgcaag cgctgggttc
      781 gcggacggtg acgcttctga ggaatcggcg cttgaccggc ctccggcaca cggcgctcca
      841 gggcgactgt gagggccaca cccaacggca cccttggttc cgcgtggacg aaccctactt
      901 gtggatcacg atcgagccgc cctggatggc ggtcgtggga tcgtcggtgt cggacccacc
      961 cagctggttg tcgtagatca ccgtgccggt cgcctcgtcc cagagcttga ttcggaactt
     1021 gtccatgccc ccgccgccgg gcagggcgcc gtccatcgcc gtgagcagga accggtagtg
     1081 gcctaggccg ttgaccatgc cggaaccctt gaactgggcc cgggcaccgg ccacgaccag
     1141 ccactcgtac tcggtgctgg agaagtcgag cgaccccgcc ttgaacttga actgtgtgtt
     1201 cccggtcggg accgaggcgc ccgtctggta gcgggagacg aaggcgaaga tcgccttccc
     1261 tgtgagggtg ggatcggcgg tgtaggaacc cgccggggag gcgatgtgtc cgccgccggt
     1321 gacgaacccg gccgttggat cgtagacgac cacgtactgg aacagtgccg agccgtcccc
     1381 cccatcgtca tccgtgaccg tggcgccgac ggtgtacacc ccggcggcgg tatagacatg
     1441 actgcccgtc gcgaggccgt cgaccacggc gccggccgac gtggcgccga cgccttccgc
     1501 gtcccagttg aaggccgcgg tgtggctgtc cagggcaccg ggatcggtga acggcaccga
     1561 agcaccgacg gaggagccca ccggctgcgg gtccacgggt gcggcgacca ggcccagagt
     1621 gggggcggca ttcacgatag tcgctgtggt ggtgctgctg gagacctgac ccaaaacgtc
     1681 ggtcaccgtg aggctgacgg tgtacgtctc gttgtcaccg taggcgtgcg caggagcgac
     1741 gccggctccg ctgaccccat ccccgaagtc ccaggcgaag ctgagtccct gctcggcagg
     1801 atcggttgat gcggcgccgt cgaacgacag ggccgatccc tcgaccccat cgtaggggcc
     1861 gcccgcagaa gcgaccggtg gaggcggggg tggcggggga ggtggggcat cgggacaaaa
     1921 cccgctcgga ccggcggtgt gaaccgctag cagttctgcg gcatccagcg cgcggtcgta
     1981 cagctgtact tcatccacga gaccgtggaa gaaagaggtc ggaaaccccg taccgctccg
     2041 ctccgccttg ccgataagca ctggatccgg cgtcacgtgg acgccgccgc tatggccggt
     2101 agcggcaatc aggtggtcgt ccacatagag gcggatgagg ttgtcggcgg cgctgtatgt
     2161 ccctgccagg aggtgccagt cgccagcttt caactgaccc ccgaacagga ccgctcgacc
     2221 cgccgggacc ccaatggaat tgaccaggaa cccggtggtc ccgtcagggt tgacgaacaa
     2281 ggcgaacgac tctgcgtagt tgccgacgtt ccccttgccg atcacactgg ggtggaatcc
     2341 gaaggacgcg gcattgagcc atgccagcac cgtgatcgag ccggtgatgt ccaggctggt
     2401 ggagggcggg acctccacga agtcatccac cccatcgagt ccgaacgcgc cccctaccag
     2461 cccggcggcg gccgcggtgg ccccgtccct gagaatcccg tggttggacc cccgggcgtc
     2521 ggacgcgtcg gtgtcgccgg tccaccaact gacgaggccc gatgggatcg gtacacacgt
     2581 cgctgaggtg ccggtcgagg agctgatcgc cggcgcttca gggcctgaga tccgctccgg
     2641 tcccgagggc accacatcgc tgcacgcgga aaggaggatc accgtggcag cgatcgcagt
     2701 tgatggcttg aaggtcatgg ctcaccttgt ggtagtgtgg ccgggggggc ggaaatcgcc
     2761 ccccgcagtg gttgtcgctt cggcgtccga ggcgcggtcg ctcagtcgga cttcaccagc
     2821 gtcatgctga acggcccagc cgtgcccacc tgcaccatct tgttcttcgc cccgttgtcg
     2881 cagtgcacgc cggaggcccc ggtgatcgtc caggtggtgc cgtcagccga ccgcgtggtc
     2941 gtgacgcgct cggaggacac tgcggagccg ctgcagctct tgccatagcg gatgatcttc
     3001 ttcgagttgg tgctcccggc caggagctcg aattcgaacg ccgccgtgcc gctgctgccg
     3061 ttcgccatcc ccgccaagcc gcaggcgttg tcgccgcccg gattgtcgtg ggtattggtg
     3121 tagagccggt cgtcggacag cccggtgccg gccgtggaca cccagccgat ccggcgggtg
     3181 gccgactgct ggacggtaag catcaggttg ccgttcacgt tgctggtgtg ggcgccgacc
     3241 ccgtccacgc cctc
//
LOCUS       DASWKS010000195         3638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_462511, whole genome shotgun sequence.
ACCESSION   DASWKS010000195 DASWKS010000000
VERSION     DASWKS010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3638
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462511"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1641
                     /locus_tag="VGA78_05765"
     CDS             <1..1641
                     /locus_tag="VGA78_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893409.1"
                     /translation="GEGDPAKVAYSFVLYEVTPQGNAVRVQVDNLDQPFDLNSGARLE
                     LGSTAKLRTLVTYLELVAGLYGQLVFQAALPPSNRVPLPRDPISEWAGGLLARHPRAT
                     LRETLDSAMQRRYSASPARFFTGGGVHNFRNFDSRFDYSAPTLVEGFRHSSNLVFVRL
                     MQDIVRYHEARLPGSIPSMAADSTLPERQALLERYADTDGRLLIERFYRRHFGKSPAV
                     MLDRLSGGSTSPERFTRVFLAVAPGASAADLAVALERQFPRSFEPGAVEQLYGSVTRS
                     LILTERAELAQVPPLELWVVAWLWLRPQATLQEIQQHAFQSRQEAHGFLFRDSPTVTR
                     AQDRAIRVSREREAFKPILLSWRRLGYPYEDIVPSLGTAIGSSGDRPAALAELVGILL
                     SDGVRRPVIRTEKLHFGPGTPFETLLERELQPGTRVMSTEVAAVARAALADVVESGTA
                     GALRGALRRPDSSEVAIGGKTGTGENQIKFFARGGRLTGVRTLSRTATFVFYLGDRFY
                     GVATAYVDGPAANEFRFTSGLPVRLVNLLLPDLAPLLE"
     gene            complement(1651..3492)
                     /locus_tag="VGA78_05770"
     CDS             complement(1651..3492)
                     /locus_tag="VGA78_05770"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX9893410.1"
                     /translation="MTRGRAPRVLVIGLDGLEPSIVDAMFAAGELPALARLRDRGGYT
                     RLATTFPAQTPVAWSSFATGTNPGGHGIYDFIRRDPATYLPDLSLNRYQQKNAFTPPK
                     AVNLRGGTPFWDLLGRAGVPSTVLRCPCTYPGEIEKGRLLSGLGVPDIRGGLGTPTVW
                     TAGPDPVQRESERVIPVRVEGGVVRTFLPGPRQEQGEAALQLTIRIEAGDVIVECENS
                     PSVRLSVSPPAWSSWVKVKFKLGLLQSAAGMVRYFVPSLQPFTLYASPVNFAPDAPLY
                     PISAPWDYAGELEDALGSYYTTGMVEDHTGLMNGRIDEYAFLAQCALVMHEREAMLQH
                     ELARFKAGFLFCLFDTPDRLQHMFWRFGEPDHPANRLSFTGEFTEVIRDHYRECDAVV
                     ARALEAVGDDALVIVLSDHGFTSFQRGVHLNGWLLRNGFLALEPGVEPGEAAGGILQH
                     IDWSRTSAYALGLGSIYLNRRGREAQGILDAGAADRTAEDIVAGLTVLIDAERGSRAV
                     ERVLRSGQLYRGPFADEAPDLLVLTRKGYRASWATGLGGIPATVFEDNVKRWGGDHIV
                     DPGAVPGVLLMSRPFQTEGAAMTDLATTILHALGVAPGAPMEGRSLI"
BASE COUNT          585 a         1231 c         1223 g          599 t
ORIGIN      
        1 ggtgaaggag atccggccaa ggtcgcctac agtttcgtcc tctatgaagt caccccgcag
       61 ggcaacgcgg tgcgggtcca ggttgacaat ctcgaccagc ccttcgacct gaattcgggg
      121 gctcggctcg agctgggctc gaccgcgaag cttcgaaccc tggtgaccta tctggagctg
      181 gtcgccgggc tgtacggcca gctggtgttc caggcggcgc tccccccatc caaccgagtt
      241 ccccttccac gagacccgat cagcgagtgg gccggtgggt tgctggcacg tcatccgcga
      301 gccacactgc gcgagacgct cgattccgcg atgcagcgcc gctactcggc cagcccggcc
      361 aggtttttca ccggtggcgg ggtccacaac ttccgaaact tcgatagccg cttcgactat
      421 tccgccccca ccctggtgga agggttccgc cattcctcca acctggtctt cgtgcggctg
      481 atgcaggaca tcgtgcggta tcacgaggcc cggttgcccg gcagcatccc cagtatggcg
      541 gcggactcca ccctgccgga gcgccaggcc ctcctggaac ggtatgccga caccgacggc
      601 cggcttttga tcgagcggtt ctaccggcgg cacttcggga agagtccggc ggtcatgctg
      661 gaccgcctga gtggaggaag tacttcgccg gaacgcttta cccgggtgtt cctggcggta
      721 gcaccggggg cgagcgccgc ggacctggcg gtggcgctcg agcggcagtt cccccggtcc
      781 ttcgagcccg gcgcggtgga gcagctctac ggcagcgtca cccgcagtct cattctcacc
      841 gagcgggcgg agctggctca ggtgccgccg ctcgagttgt gggtagttgc ctggctgtgg
      901 ctgcgtcccc aggcgaccct gcaggagatc cagcagcacg cgttccagtc gcggcaggaa
      961 gcccacggct tcctgttccg ggacagcccc accgttaccc gggcccagga ccgcgccatc
     1021 cgggtctcgc gggagcgcga ggcgttcaag cccatcctcc tttcgtggcg gcggctgggc
     1081 tacccctacg aggacatcgt cccatcgtta ggcacggcga tcggcagctc gggcgatcgg
     1141 ccggcggcgc tggccgagct ggtcgggatt ctgctgagcg acggagtgcg ccggcccgtg
     1201 atccgaaccg agaagctgca cttcggtcca ggcacgccct tcgaaaccct gttggagcgc
     1261 gagctgcagc cgggcacccg agtgatgtcg accgaggtgg cggcggtcgc gcgggccgct
     1321 ctggcggatg tggtggaaag cggaacggcc ggcgcccttc ggggcgccct gcggcggccc
     1381 gacagcagcg aggtcgcgat cggggggaag accggtaccg gtgagaacca gatcaagttc
     1441 ttcgcccggg gcggccgcct gaccggcgtg aggactctga gccgcaccgc caccttcgtc
     1501 ttctatctcg gcgatcggtt ttacggtgtg gcgaccgcgt acgtggatgg gccggccgct
     1561 aacgagttcc ggttcaccag cgggctgccg gtacggctgg tgaacctgct gctgccggat
     1621 ctggcaccgt tgctcgagtg aggccgaccg ctagatcagg gagcggcctt ccataggcgc
     1681 accgggcgcc accccgagcg cgtgcaggat ggtggtcgcc agatccgtca tggcggcacc
     1741 ctcggtttga aagggccgac tcatgagcag caccccgggc acggcaccgg ggtccacgat
     1801 gtggtctccc ccccaacgct tcacgttgtc ctcgaagacg gtggccggaa tgccgcccag
     1861 cccggtggcc cagctcgccc gatagccttt ccgagtcaga accagcagat cgggcgcctc
     1921 gtcggcgaac ggtccccgat agagctggcc cgagcgaagc acccgctcga ccgcccggct
     1981 gcctcgctcg gcgtcgatca gaacggtgag tcccgccacg atatcctcgg cggtgcggtc
     2041 cgccgccccg gcatcgagga tcccctgcgc ttcgcggccc cggcgattca ggtagatact
     2101 gcccaggccg agtgcgtagg cagaggtgcg gctccaatcg atgtgctgga gaatcccgcc
     2161 ggccgcctca ccgggctcga cccccggctc cagtgccaga aagccgttcc ggagcagcca
     2221 gccgttcaag tgcactcccc gttgaaagct ggtgaagccg tggtcgctca agacgatcac
     2281 cagggcgtcg tctcccacgg cctccagggc gcgtgcgacg acggcgtcgc attcccgata
     2341 atgatcccga atcacctcgg tgaactcgcc ggtgaaggac agacggttgg ccggatggtc
     2401 cggctcgccg aagcgccaga acatatgctg cagccggtcg ggggtatcga acagacagaa
     2461 gagaaatccc gccttgaatc gcgccagctc gtgctgcagc atggcttccc gttcgtgcat
     2521 caccagagcg cactgggcca gaaaggcata ctcgtcgatc cggccgttca tgaggccggt
     2581 gtggtcctcc accatccccg tcgtgtaata gctccccagc gcgtcctcca gctcgccggc
     2641 atagtcccag ggcgcgctga tggggtagag cggcgcgtcg ggcgcgaagt tcaccggcga
     2701 cgcatagagc gtgaagggct ggagcgacgg gacgaagtac cgaaccatgc cggcggccga
     2761 ctgcagcagg cccagtttga acttcacttt cacccaggag gaccaagcgg gcggactgac
     2821 ggacagacgg actgacggac tgttctcgca ctcgacgatc acatcgccgg cttcgattct
     2881 gatcgtcaac tggagtgccg cttctccctg ttcctgtctc ggaccgggga ggaaggtcct
     2941 tactaccccg ccttcgactc gaaccgggat cacccgctcg ctctcccgtt gtaccgggtc
     3001 cgggcccgcg gtccagacgg tcggagtgcc caggccgccc cggatatcgg gtactcccag
     3061 tcccgagagc agccggccct tttcgatttc gccggggtag gtgcagggac aacgtagcac
     3121 cgtcgacggc acgccggccc tgcctaacag gtcccagaag ggggtccccc cgcgcaggtt
     3181 cacggccttc ggaggggtaa atgcattctt ctgctggtag cggttgagcg acaggtcggg
     3241 gaggtatgtg gccgggtccc gccggatgaa gtcgtagatg ccatgcccgc cggggttggt
     3301 cccggtggcg aagctggacc aggcgaccgg agtctgggcc gggaaggtgg tcgcgagccg
     3361 ggtgtatccc cctcggtcac gcaatcgagc cagggcgggg agctcaccgg ccgcgaacat
     3421 cgcatccacg atcgacggtt ccagcccgtc gaggccgatc accagcaccc gcggcgcccg
     3481 gccgcgggtc atttcttccc gaagagtcgc gcgacggctc gaccgacgcc cttggccagg
     3541 gccaccgtct tgtgccagaa catgatcgcc acgcccgcca cggccgcgat ggccgaggca
     3601 atgggcatgg cgacgtcggg gccgatatac atgggtca
//
LOCUS       DASWKS010000196         7630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2323006, whole genome shotgun sequence.
ACCESSION   DASWKS010000196 DASWKS010000000
VERSION     DASWKS010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2323006"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VGA78_05775"
     CDS             <1..525
                     /locus_tag="VGA78_05775"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893411.1"
                     /translation="SYYDVTPYHLRAHRANNYYVIDGKTQTNGIDFDTGITTSNGGLN
                     APLGDMAKYLRFLLGGGGGLVLQRSTLEEMWRPVLQVGPPAAGSGERSSVGLGFFITE
                     YPGGVRLIGHTGSQAGFRSFFWLHPESGTGIIANFNTSPPSENAGPEVKPRIPRIFSG
                     LVQRYVTWLQSEAR"
     gene            501..1121
                     /locus_tag="VGA78_05780"
     CDS             501..1121
                     /locus_tag="VGA78_05780"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX9893412.1"
                     /translation="MAAERGPLTRGSRLPLFRDGPGDRRDFLRDSVGQWLEKALEATE
                     ERVVQQRWLRPPGALPEVAFLAACTRCGECVSACPPKIIQVVPTSGGLAAGTPYLDLG
                     RSPCLACPDMPCARACPTDALTVPANGWIGYRLGELEFLPERCVTFRGQPCRACADAC
                     PVGEAALVMDDAGHPVLKHEGCVACGTCIRACISVPPSYEFHPTEE"
     gene            1122..1475
                     /locus_tag="VGA78_05785"
     CDS             1122..1475
                     /locus_tag="VGA78_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9893413.1"
                     /translation="MSDVPYRVEKPWGYELIWARTDRYAGKILHVNAGHILSCQYHRQ
                     KDETMHVLRGELLLRTGTRADALEERSLRAGQSVHIPAGLIHQLEALVDTDVLEASTP
                     ELDDLVRLSDRYGRS"
     gene            1478..2464
                     /locus_tag="VGA78_05790"
     CDS             1478..2464
                     /locus_tag="VGA78_05790"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX9893414.1"
                     /translation="MQVIIPLAGKGTRLRPHTHLVPKPLLKVAGRPVMDWVMDRLDGL
                     DVSELIFITGHLQQQVEEYARSRYRWPCRFIEQKVQDGTAGAVNLARPHVTEPVLIIF
                     VDTVFEADLSLARTTRADGIIWAKEVEDYQRFGVVVTDEQGYMTRIVEKPEDPISRLA
                     NIGLYFIRDTETLWQGIDHVLQQPANRGEFFLTDAFQYMIDRGRKILTAEVGGWYDCG
                     TLEAIIETNETLLRLGAERQPLLPDDVIVHQPVYIEDGVRIERSVIGPNVSIERGTTI
                     LDSHLAHTLVGHQCHLTGVRLVQSLLGNHVRMRDVGGSASLGDHAEFVGVPE"
     gene            2451..3974
                     /locus_tag="VGA78_05795"
     CDS             2451..3974
                     /locus_tag="VGA78_05795"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEX9893415.1"
                     /translation="MSLSDELCRSYLDLKWHFDPAGGALAGVPGTSGRLGHFDVASLR
                     AHVAAFRAIEAGIEELEVEDSADELDRTALLDDVRVTLFRLQHERPNERNPAFWLKHL
                     CDALWALRRATGPADRVALDCLTEVPRFLSDARATLSQPPAAFIDAARALTGPAAALL
                     SGLAAIEGGGEPAQAAAAAEAALARFQLLLDTELSAHADEHAFATGPEHFDRLLHHEH
                     AIIAGAPELWRAILRLEEEQEGELRDLADQLGRGGDWRAALLERQQAFAPADIMEFLT
                     HGMKQRREAADRAGLLLVPELPLFERMPEHAAQFEPLASYRPPSHAGPATIFVSDRPA
                     VRMAMPALLTELAGPGMQVQGIRAATLPSEVRRAISENSGWGLYAIELLEQAGGWPDL
                     DTRLIIRAHVLYRVLLARLDIGLHTRQIGLAEAVTSLTERLPLQPFEALAAVRGILLE
                     PTRAAGTIAGRRELLRLRDDRMEKEGAAFSPRRHHEEVLHFGGLPVPLIRWGLGLEA"
     gene            3971..5197
                     /locus_tag="VGA78_05800"
     CDS             3971..5197
                     /locus_tag="VGA78_05800"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9893416.1"
                     /translation="MSSGRVEPRTVIPPTVRGLSLVSFLNDFASEMVYPLLPAFVTRV
                     LGGGAVALGALDGAADLTAAALRWISGRLADRPGWSGRLITVGYSLAVVVRPLVALTS
                     AAWQVITLRVLDRVGKGLRSPARDAMIARVTVPEARGRAFGFHRGADHLGAVAGSLAA
                     WALLASHTGVRGVILASAVPGLLAMGVLLPVLRRAGRRADGRAVSVQPFEVTTEPEPA
                     PGVDAAGRRFWFPVVALALLTVGRLPETLLLLRLQDLGVAVTLVPLAWAGLHIVRTAA
                     AYPGGWLSDRFGPVPVLALGGLLFAFTCLLLTRPLGAGAAVGVFLLLGLVSGFSEAGE
                     RAAVAALAPRRTGRGFGHAQGLVGILALPAGLAFGGIYQSRGGPLALAASAGATALAV
                     ACWLVAAGGKKREPLA"
     gene            complement(5250..5477)
                     /locus_tag="VGA78_05805"
     CDS             complement(5250..5477)
                     /locus_tag="VGA78_05805"
                     /inference="COORDINATES: protein motif:HMM:NF016234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEX9893417.1"
                     /translation="MPDGRSWSKAVEGGRSRLHAGRILQVIRRVLGMPDYDGYVRHVR
                     SCHPGQTVPTERQFFEEYLKARYEGGPTRCC"
     gene            complement(5470..7500)
                     /locus_tag="VGA78_05810"
     CDS             complement(5470..7500)
                     /locus_tag="VGA78_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEX9893418.1"
                     /translation="MPRITWIAVSLVGAIAWGVLALSRGETISAAWLVLAAVGTYLIG
                     YRFYSRFLAFQVFGLDNRRATPAERLNNGRDFVPTTRWVLFGHHFAAIAGAGPLVGPV
                     LAAQFGYLPGVIWIVFGVVLGGAVQDFIILFGSMRRDGKSLGQMAKEEIGELPGLIAM
                     VAILAIMVILLAVLALVVVNALRDSPWGVFTILCTIPIAILMGFWMKVWRPGKTLEAS
                     LGGVVLLLVALVAGRWVGESATLAPLFRHDGLTIAWAMIGYGFIASVLPVWMLLCPRD
                     YLSTFMKIGTIVLLAIGILIVLPPVRMPAVTRFVDGTGPIFAGKLFPFCFITIACGAI
                     SGFHALVSSGTTPKMIRQENDARVIGYGGMLMESFVAVMALCAATALEPGIYFAINAP
                     LASLGASAETAAQAVRTWGFTVSPEQMTSLAASVQENTLLGRTGGATSLAVGMAQIFS
                     GVFGQGLMSLWYHFAIMFEALFILTTIDTGTRVGRFMLQELGGQVWKPFGRTSWYPSI
                     VLASAGVVAGWGYFLVQGVQDPLGGINSLWPLFGISNQLLAAVALCVGTTLLIKSGRR
                     RYAGITILPLAWLLAVTLTAGWQKIFAVDPRLGFLSHAAVIAEQVASGAMDAGQGARV
                     IFNDRLDAIMAALFMTITVVLVVASVRQWIAVARGRKPAQTREASFVESAYA"
BASE COUNT         1216 a         2591 c         2590 g         1233 t
ORIGIN      
        1 agctactacg atgtgacccc gtatcacctt cgggctcatc gcgccaacaa ctattacgtg
       61 atcgatggga agacccagac gaacggcatc gacttcgaca ccgggatcac cacctccaac
      121 ggtgggttga atgctccgct cggcgatatg gcgaaatacc tgcgcttcct gctggggggt
      181 gggggcggcc tggtcttgca gcggtccacc ctggaggaga tgtggcgtcc cgtgcttcag
      241 gtcggaccgc cagcagcggg gagcggggag cggagctcgg tgggactcgg attcttcatc
      301 accgagtatc cgggcggggt ccggctcatc ggccacaccg gaagccaggc cgggttccgg
      361 tccttcttct ggcttcatcc tgaaagcggc accggcatca ttgccaactt caatacttct
      421 cctccctcgg agaacgcggg tccggaggtc aagcccagga ttccccgaat cttctccggg
      481 ctggtgcagc gctacgtcac atggctgcag agcgaggccc gctgacccgc ggctcacgac
      541 tgcccctgtt ccgcgatggc ccgggcgatc ggcgggattt cctgcgcgat tcggtgggcc
      601 agtggctgga gaaggccctg gaggccaccg aggaacgggt ggtgcagcag cgctggctcc
      661 gcccgccggg ggccctgccg gaggtcgcgt ttctggccgc atgtacccgt tgcggtgaat
      721 gcgtctccgc ctgtcctccc aagatcatcc aggtggtgcc caccagcggc ggcctcgccg
      781 cgggcacccc ctatctcgac ctgggccggt cgccctgtct ggcatgtccc gacatgcctt
      841 gcgcccgggc ctgtcccacc gacgcgctca ccgtcccggc caacggctgg atcgggtacc
      901 ggctggggga gctcgagttt ctgccggaac gctgcgttac gtttcgaggc cagccgtgtc
      961 gcgcctgcgc cgacgcgtgt ccggtcggag aggccgcgct cgtgatggac gacgccggac
     1021 atccggtgct caagcacgaa ggctgcgtgg cctgcggaac ctgcattcgc gcctgcatca
     1081 gcgtgccgcc ttcgtacgag ttccatccca cggaggagtg agtgagcgac gtcccctacc
     1141 gggtcgagaa accgtgggga tatgagctga tctgggcccg gaccgatcgc tacgccggca
     1201 agatcctcca cgtgaacgcg ggccacatcc tgagctgtca gtaccaccgg cagaaagacg
     1261 agaccatgca cgtgctccgg ggcgagctgc tgcttcgaac cggaacccgg gcagacgcgc
     1321 tggaggagcg gtccctccga gccggccagt cggtgcatat ccccgccgga ctgattcacc
     1381 agctcgaggc gctggtggac accgatgtgc tggaggcatc cacgccggag ctggacgacc
     1441 tggtccgtct gagcgaccgc tacgggagga gctgaggatg caggtgatca tcccgctggc
     1501 cgggaagggg acccggctgc ggccccacac ccacctagtg ccgaagcccc tgctcaaggt
     1561 ggcgggacgt ccggtcatgg actgggtgat ggaccgactc gacggactgg acgtatcgga
     1621 gctgatcttc atcaccggcc acctccagca gcaggtcgag gaatacgccc ggtcgcgcta
     1681 tcgctggccc tgccgtttca tcgagcagaa ggtgcaggac gggaccgccg gcgcggtcaa
     1741 cctggcccgg ccccacgtca ccgagccggt gctgatcatt tttgtcgaca ccgtgttcga
     1801 ggccgatctg tcgctggccc gcaccacccg ggcggacggg atcatctggg ccaaggaagt
     1861 ggaggactat cagcgcttcg gcgtagtggt caccgacgag cagggctata tgacccggat
     1921 cgtggaaaag ccggaggacc cgatttccag actggcgaac atcgggctct acttcatccg
     1981 cgacacggag acgctctggc aaggcatcga tcatgtgctg cagcagcccg ctaaccgggg
     2041 cgagttcttt ctcaccgatg cgtttcagta catgattgac cggggccgga aaatcctcac
     2101 cgccgaggtc ggcggctggt acgactgcgg tactctcgaa gccattatcg agaccaacga
     2161 gaccctgctg cggctggggg ccgaacggca accgctgttg cccgacgacg tgatcgtcca
     2221 ccagccggtc tacattgagg acggagtccg catcgagcgc agcgtgatcg gtcccaatgt
     2281 gagcatcgag cgagggacca cgatcctcga cagtcacctg gcccatacgc tggtgggcca
     2341 tcagtgccac ctgaccggcg tgcggctggt gcaatccctg ttgggcaatc atgtccggat
     2401 gcgcgacgtg ggcggttccg ccagtctggg cgatcacgcg gagttcgtcg gtgtccctga
     2461 gtgacgagct ctgccgttcc tacctcgatc tcaagtggca cttcgatccg gccggcggag
     2521 cgctggccgg agttcccggg accagcggcc ggctggggca cttcgatgtg gcctcgttgc
     2581 gggcccatgt agccgccttc cgggccatcg aggcgggcat cgaggaactc gaagtcgagg
     2641 attcggccga cgagctggac cggaccgctc tgctcgacga tgtccgggtc accctcttcc
     2701 ggttgcagca tgagcgaccc aatgaacgca atcccgcctt ctggctgaaa cacctgtgcg
     2761 atgctctctg ggccttgcgg cgagccaccg gtccagcaga ccgggtggcc ctcgactgcc
     2821 tgacggaagt accccgcttc ctgagcgatg cccgggccac tctgtcgcaa ccgcccgcgg
     2881 cattcattga cgcggcccgg gctctgaccg gcccggccgc ggcgctcctg agtggcctgg
     2941 ccgcgatcga aggcggcggg gagccggccc aggcggcggc cgcggccgag gccgctttgg
     3001 cgcgatttca gctgctgctg gacaccgagc tcagcgccca cgcggacgag cacgccttcg
     3061 ccaccggccc cgagcacttc gaccgattgc tgcatcacga gcacgccatc atcgccggcg
     3121 cgcccgagtt gtggcgcgcc atcctgcgac tcgaggaaga acaggaaggc gagctgcggg
     3181 acctcgccga tcagctgggc cggggcgggg actggcgggc cgcgctgctg gagcggcagc
     3241 aggccttcgc tccggccgat atcatggaat ttctgaccca tggaatgaaa cagcggcgcg
     3301 aagcggccga ccgggcggga ttgttgctgg taccggagct gccgttgttc gagcgcatgc
     3361 ccgagcatgc ggcccagttc gaaccgctcg ccagctaccg gccaccgtcg cacgccgggc
     3421 cggccacgat ctttgtctcc gaccgtccgg ccgtcaggat ggccatgccg gcgttgctca
     3481 ccgagctggc gggaccgggc atgcaggtgc agggcatccg ggccgcgacg ctgccctcgg
     3541 aagtgcggcg cgccatcagc gagaactcgg gctggggact ctacgccatc gagctgctgg
     3601 agcaggccgg cggctggccc gacctcgaca cccgcctgat cattcgggcc cacgtgctct
     3661 accgcgtgct gctggcgcga ctcgacattg gtctccacac ccgccagatc gggctggcgg
     3721 aggccgtcac ctcgctgacc gaacggctgc cgctgcaacc gttcgaggca ctggccgctg
     3781 tccggggaat cctgctcgag ccgacccgcg cggccggaac catcgccggc cggcgcgagc
     3841 tgctccggct ccgggacgat cggatggaga aggagggggc cgccttctcg cctcggcgcc
     3901 accacgagga ggtgctccac ttcggtgggc tgccggttcc gctcattcga tgggggctgg
     3961 gactggaagc atgagctcag gccgggtgga gcctcgcacg gtcattcccc ccaccgtgcg
     4021 gggcctctcc ctcgtctcct ttctcaacga tttcgccagc gagatggtgt atccgctgct
     4081 tcccgccttc gtgacacggg tgttaggcgg cggcgcggtc gccctcgggg cgctcgacgg
     4141 tgccgccgat ctgaccgccg cggccctgcg atggatcagc ggacggctgg cggaccggcc
     4201 cggctggagc gggcgtctga tcaccgtcgg ctacagtctg gcggtggtgg tgcgaccgct
     4261 ggtggctctg accagcgcgg cctggcaggt gatcacgctc cgggtgctgg accgggtggg
     4321 gaaggggctt aggtctccgg cccgcgacgc catgatcgcg cgcgtgacgg tcccggaagc
     4381 gaggggacgc gccttcgggt tccatcgcgg ggccgatcac ctcggagcgg tggccggctc
     4441 actggccgcg tgggcattgc tcgcctcgca caccggagtt cgaggcgtca tcctggccag
     4501 cgccgttccc gggctgctcg cgatgggagt cctgcttccc gtcctccggc gggccggcag
     4561 acgggcggac ggacgggcgg tctccgtcca acccttcgag gtcacgacag aaccggaacc
     4621 ggctcccggc gtcgacgccg ccgggcggcg tttctggttt ccggtcgtgg cgctggcact
     4681 gctcacggtc ggccgcttgc cggagaccct gctgttgctc cggctccagg acctgggagt
     4741 cgcggttacc ctggtaccgc tcgcctgggc cgggctccat atcgtccgta ccgcggccgc
     4801 ctaccccggg ggatggctca gcgaccgctt cggcccggtg ccggtcctgg ctctgggcgg
     4861 cctcttgttc gcgttcacct gcctgctatt gacccgcccc cttggagcgg gtgccgcggt
     4921 gggagtgttc ctcctcctgg ggctggtatc gggcttttcc gaagcgggag aacgggccgc
     4981 tgtggccgcg ctggcgccgc gtcggactgg tcgcggcttt ggtcatgccc agggcctggt
     5041 cgggatcctg gccttgccgg cgggcctggc gttcggtggg atctatcaga gccgcggcgg
     5101 tccactggcg ttggccgcga gcgccggtgc cacggcgttg gccgtggcct gctggttggt
     5161 tgctgccgga ggcaagaagc gggagcctct cgcgtgagcc accgccttcg accgccttcg
     5221 acccccctcg acccccgtcg accggtggtt caacaacatc tcgtcggccc gccctcgtaa
     5281 cgggccttca ggtattcctc gaagaactgt cgttcagtag gcacggtctg tccgggatga
     5341 cagctccgga catggcgcac gtagccgtcg tagtcgggca tgccgagaac gcgccggatg
     5401 acttggagaa tccgccccgc gtgaaggcgg cttcgaccgc cttcgaccgc cttcgaccag
     5461 cttcgaccgt caggcatatg ccgactccac gaacgacgct tcccgggtct gggccggttt
     5521 ccggcctcgc gccaccgcga tccactgccg caccgacgcg actaccagca ccacggtgat
     5581 ggtcatgaag agcgccgcca tgatggcgtc gagccggtcg ttgaagatga cccgcgcccc
     5641 ctggccggca tccatggcgc cggaggcgac ctgctccgcg atcacggccg catgggagag
     5701 gaagcccagc cgcgggtcga ccgcgaagat cttctgccag ccggccgtga gcgtgaccgc
     5761 cagcagccac gccagcggca ggatggtgat cccggcgtag cgtcgcctgc cgctcttgat
     5821 caggagagtg gtgcccacgc agagcgccac cgccgccagc agctggttgc tgatcccgaa
     5881 caggggccag agcgagttga tcccgcctaa cgggtcctgc actccctgca ccaggaagta
     5941 gccccagccg gccaccactc cggccgaggc gagcacgatg ctgggatacc acgaggtccg
     6001 gccgaacggc ttccagacct ggccgcccag ctcctgcagc atgaaccgcc ccacccgggt
     6061 gccggtgtcg atcgtggtca ggatgaagag ggcctcgaac atgatggcaa agtggtacca
     6121 gagcgacatc aatccctgtc cgaacacccc gctgaagatc tgcgccatgc cgaccgccag
     6181 cgaggtggcg ccgccggtcc ggcccagcaa ggtattctcc tgcaccgacg ctgccagcga
     6241 agtcatctgc tccgggctga cggtgaagcc ccaggtgcgc acagcctggg ccgctgtttc
     6301 cgccgaggca cccagtgacg cgaggggcgc gttgatggcg aagtagatgc ccggctccag
     6361 cgcggtcgcc gcgcagagcg ccatcaccgc cacgaagctc tccatcagca tcccgccgta
     6421 cccgatcacc cgggcgtcgt tttcctgacg gatcatcttg ggggtcgtgc ccgaggaaac
     6481 cagggcgtgg aatcccgaga tggccccgca ggcgatggtg atgaagcaga aggggaacag
     6541 cttccccgcg aagatcggcc cggtgccgtc gacgaagcgg gtgaccgccg gcatccggac
     6601 cgggggcagc acgatcagaa tcccgatcgc cagcaggacg atggtcccga tcttcatgaa
     6661 ggtggagagg taatcgcggg gacagagcag catccacacc gggagcacgc tggcgatgaa
     6721 gccgtagccg atcatggccc aggcgatcgt caggccgtcg tgccggaaga gtggcgccag
     6781 ggtcgccgat tcgcccaccc agcgtcccgc caccagggcc accagcagca gcaccactcc
     6841 gccgagcgat gcctccaggg tcttgcctgg gcgccagact ttcatccaga accccatcag
     6901 gattgcgatc gggatggtgc acaggatggt gaagacgccc caggggctgt cgcgcagcgc
     6961 gttcaccacc accagcgcca gcaccgccag caggatcacc atgatggcga ggatcgccac
     7021 catcgcgatg agcccgggca gctcgccgat ctcctccttg gccatctgcc ccagggattt
     7081 cccatcccgc cgcatcgacc cgaacaggat gatgaaatcc tgcaccgcgc cgcccagcac
     7141 cacgccgaac acgatccaga tgaccccggg tagatacccg aattgggccg ccaggaccgg
     7201 accgaccagt gggcccgcac cggcgatcgc ggcgaagtga tggccgaaga gcacccagcg
     7261 ggtggtgggc acgaagtcgc ggccgttgtt gagccgttcg gccggggtgg cacgccggtt
     7321 gtcgaggccg aagacttgga aggccaggaa gcgggagtag aaccgatagc cgatcaggta
     7381 ggtcccgacc gcggccagca ccagccaggc cgcgctgatg gtttcgcccc gggagagcgc
     7441 cagcactccc caggcgatcg cgccgaccag gctcacggca atccaggtta ttcgaggcat
     7501 gggtggcaat gtagggaatc caggaaccgt cggacagtcg gtctgtccgt cagtcggtcg
     7561 ggtcggtcag tcggtcagtc ggtcggtcac gttcgcgagg tggacctcca tgcgaggacg
     7621 aaactcacag
//
LOCUS       DASWKS010000197        10580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_89093, whole genome shotgun sequence.
ACCESSION   DASWKS010000197 DASWKS010000000
VERSION     DASWKS010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10580
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89093"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="VGA78_05815"
     CDS             complement(<1..788)
                     /locus_tag="VGA78_05815"
                     /inference="COORDINATES: protein motif:HMM:NF027640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HEX9893419.1"
                     /translation="MTTPLSRHPLLRVTIYYVILGGVAVLLVRLAPGVAERIVSGSGL
                     PMDVGQFPPGAAADSTIQLTTGARDRVSLTVILAMIVSSLLMLPVVWVYIHTRMKKGY
                     QQSLVQTILMLPLVVAGTVILVKDSIPLAFSLGGIVGAVAFRNRLEDTKDAVYVFLSI
                     AVGLACGILAFHIAVSLSLFFNLVVLALWYTDFGRVPGELSAPVAQRRIETARGIVGE
                     AGKHSGELVQALDQQILQSMTPDQLQALVEKAKSRRKKIEEDLYG"
     gene            complement(845..3358)
                     /locus_tag="VGA78_05820"
     CDS             complement(845..3358)
                     /locus_tag="VGA78_05820"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9893420.1"
                     /translation="MGLALAGLALAPLSAQDSVSIVPDPDIHRGGLRRWLLGDHYRDL
                     WTIPLRVPKLDLAREAGGLRPLRKGGGLQTKSLRFRGGDGKEYVFRMVRKDPTQVVPP
                     ELRETLAKDIVHDQMSAMHPGAALVVPPILEAAGVLHVTPRFFVMPDDPALGEFRAEF
                     ANEMGLLEERPTESDDDLPGFAGARKIVDTPELIEALWKEPWVKVDAQAFLTARLLDL
                     YLGDWDRHEDQWRWALVGAGNAGRWLPIPRDRDQAFVRYDGLLLWVARQGTPQLLVFD
                     EDYAEPLAATWNGRNLDRRLLAEVGRATWDSIARELQRVVTDQVIDTAVGRLPLEYRT
                     RNGEWLRGMLVQRRDGLLVAAIRTYEFLARKVRLQASDRDDHAVVEHLPEGRTDVQLM
                     RSRGPAYYRRVFHADETDEIQLDLRDGDDRLVIRGDGHGPMLRVMGGAGTDSLIDSSR
                     SRHSAFYDSDGITVAVGRGVDRKRYVQPSDTNPARLPERDWGSKSLGWPMVYATSDLG
                     VTAGYGWTRSGYAFRRQPYSSKVNLGAEYSFGRTSGRFMLETRWKAVNRNRFITLSAI
                     ASGIEQLQFYGFGNDTQDTSSTSFYRVRHQAFELNPGLGFGLEGRSKLLFHIRARHTV
                     TDPDDPQNQKGPISELKPLGLGDYGHLGLVGRYEWDTRDFPLLPSKGARLQLEAAYYP
                     VTWSTDEEGFGTLDAVASTFVSPGNQDWLTFAFRAGGRHSYGEVPYFEASYLGGTRSL
                     RGYPRNRFAGESAVFGNAEIRLRVSRAFILVPGELGIFGLADAGRVFLDDDTDSGDWH
                     SNLGGGIYFSMLKRSPVISLGMAQGDEGARFYLGLGMGY"
     gene            complement(3369..4559)
                     /locus_tag="VGA78_05825"
     CDS             complement(3369..4559)
                     /locus_tag="VGA78_05825"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9893421.1"
                     /translation="MRWSQGVLASILLLALGGCVRQPSQFSPAPGLGEDSLDFSVILI
                     GDAGGPPSADAVLRAVEEDVKTLKDKSVIVFLGDNIYPRGLPAPEAVDYQDALSRINR
                     QVKLLTSADVKGIFVPGNHDWDRSGPDGFGAVRREALAVEESGGEHVEFLPPNGCPGP
                     EVREFGSFRLVLLDTEWLLRDAEKGRDGCTATSDSAVRAQLETALAGANGKHVVVAAH
                     HPLRSGGEHGGYFRVRDHLFPLRAVKSWLWLPLPVIGSTYPLARSGGASPQDISHSRN
                     RSMRVLLEGALRRYRPLVYAAGHEHAMQVMAGNSARWLLVSGVGYFGHGGYVTWLDST
                     RYATSASGYMRLDATRSGNVRLAVMTVDLEGKSTEAYSLWLTPGARNEECTEPSQERC
                     SRRR"
     gene            complement(4556..5443)
                     /locus_tag="VGA78_05830"
     CDS             complement(4556..5443)
                     /locus_tag="VGA78_05830"
                     /inference="COORDINATES: protein motif:HMM:NF018659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdiA-regulated domain-containing protein"
                     /protein_id="HEX9893422.1"
                     /translation="MRRLVILRAAAVILSVAKDLALIVLAALLLTPAVADSQSAGGIR
                     CPVNRDPVARWGLPSGLAEVSGLAIGPGGRILGHGDEFGRLFELDPGSGKVLRRITLK
                     GQPKGDFEGVAAAGKSIALMTSTGRLYVFKLSDAGDQVTFRTVETGLGKACELEGLAW
                     DVGADALLIPCKNGKTRATRNGLTIFRWSMAGKGSAGEAIRVSAQNLSRAAGTPRINA
                     TSVDLDPVTGHLLLLSSRPALVLELESNGRIVGVARLRDEVHSRAEGLAVTKDAMYIG
                     DESSGGRGTIAKYACEAGR"
     gene            complement(5542..6555)
                     /locus_tag="VGA78_05835"
     CDS             complement(5542..6555)
                     /locus_tag="VGA78_05835"
                     /inference="COORDINATES: protein motif:HMM:NF027640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HEX9893423.1"
                     /translation="MATAESPAVEPLVAGQGSSVTRQIVERFTYPAERPFLSITLYYV
                     LLIGVATLLLWLFPDLRSVISGERLAAMLQGGSGSGNAVPFTNPTPSGGAWFSWQFSL
                     YLGGAMIGSLLLMLPSSWVYMATRQKKGFDQTMVQTLVILAMAVSGVVVIVRNSLALA
                     FSLAGIVGAVRFRNSLPDTRDTLYVFLSIGVGLAAGVEALAAAAMLSIVFNYSVLLLN
                     RADYGMCELGKSSRPLLHTHAAQAGSNGAGKNSKPDARKGDFNAVLVVRSTSADETMQ
                     RLPAFMDREFKRWTLAEIQSTKKGRSHLKYLVRTRKGVTPEEVEDAVLVVGGESVVGV
                     KVH"
     gene            complement(6724..6795)
                     /locus_tag="VGA78_05840"
     tRNA            complement(6724..6795)
                     /locus_tag="VGA78_05840"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6761..6763),aa:Thr,seq:cgt)
     gene            complement(6809..6890)
                     /locus_tag="VGA78_05845"
     tRNA            complement(6809..6890)
                     /locus_tag="VGA78_05845"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6854..6856),aa:Leu,seq:gag)
     gene            7002..9041
                     /locus_tag="VGA78_05850"
     CDS             7002..9041
                     /locus_tag="VGA78_05850"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX9893424.1"
                     /translation="MRGTALALGLTLAVVGAGSGQDRPDSTRRDTTAQLPALEVQGIR
                     PLTTVGGSSALRVRLDSVPLPPAPTLEQTLRQLPFLHLRRNSRGEAELSGRGSESRQV
                     AVLVDGIPITLAWDARTDVSVIPATGFQDVHYIRGLSSMLHGPNVLGGIIEVGVGQAS
                     FMPSHPSADFAVGFDHVGGYGGGAGISLPLVRPSGTWLVRAGTSFRDTPGVTLARGVD
                     EPLPTDHDLRLNTDAENIDGFVAVRYEGHGGGWVSFSGSSFRAERGIAAELGYDDARF
                     WRYPHQSRSLLVLSGGTGDRRSPLGGRGDLEASFGVDLGRTDIDAYTSRTYSELDGFE
                     NGKDRTLTLRLLGDQSLGQRGELRTAFTLSEIRHDEFLPSADARYRQRLWSLGGETIW
                     RLVDQGQGINSLRLSLGGAYDVGQTPESGGREPRQGTLSEWGARVGLTMVAADGRLLA
                     HGGVSRRGRFPALRELYSGALDRFAPSPELQPENLVAIEAGITTRLGDNSEIQLVGFH
                     HLMNDAVVRITLPDNRFMRVNRNRLESIGIELLGSTLIGPLAVGGDLTLQSVDLTDTD
                     AGITNRPENLPEAFGGAYVRLRLPLGIRTGTELRYTGSQFCIDPATGDDTELQSGTVV
                     NANVSREWRLRPANGGWLSRLEARLALDNIGNVALYGQCRLPDPGRLVRLQVRLF"
     gene            9117..>10580
                     /locus_tag="VGA78_05855"
     CDS             9117..>10580
                     /locus_tag="VGA78_05855"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893425.1"
                     /translation="MRRCPPLTRGVFLASAMLMALAAGLPAQLPTASLDSALLAGFRW
                     RNIGPANMSGRVTDIEGIGYPSRTFYVAAAAGGIWKTTNAGTTFELVFGMNAPVISMG
                     DLAIAPSDTNVIYAGTGEEDSRNSISPGAGVFKSTDGGKTWAFVGLKETEAIGRIVVH
                     PTDPNTVWVAALGAIWRSNPERGLYKTTDGGKTWKLVKFVSDKAGFVDLAIDPANPNV
                     LWASSWERVRGPYFLKGGGPGSGLWKSTDAGETWTQVKGGGLPVSTLGRIGIAIARSN
                     PSILYLMVEADTMPNPKPTAGSKAQVRPSGLYKSLDGGATWTKMQPQNVRPFYYSQVR
                     VDPKNPDRVFWSSTPVNFSLDGGKTARTATQGLHVDHHAMWIDPNDPSFMVVGNDGGI
                     GISFDGGGNYIFNNSFAIGQFYNVSYDMAVPYNVCGGLQDNGSWCGPSRRRGSISNMH
                     WVNVSGGDGFVTAQDPTDPNIIYSESQGGNIGRLDFRT"
BASE COUNT         1843 a         3600 c         3445 g         1692 t
ORIGIN      
        1 ccgtagagat cttcctcgat cttcttgcgc cggctcttgg ccttttcgac cagcgcctgc
       61 aactgatccg gggtcatcga ctggaggatc tgctggtcca gggcctgcac cagctccccg
      121 gagtgcttgc ctgcttcccc gacgattccg cgggcggttt cgatccgcct ctgggccacc
      181 ggggccgaca attcacccgg cacccggccg aagtcggtgt accagagggc gagcaccacc
      241 aggttgaaaa aaagcgacag cgacacggcg atgtggaagg ccaggatgcc acaggcgaga
      301 cccaccgcga tggagaggaa gacgtagacc gcgtctttgg tgtcctccag ccggttgcgg
      361 aaggcgaccg cgcccacgat gccgcccaga ctgaacgcca acggtatgct gtccttgacc
      421 agaatgaccg ttcccgccac caccagcggc agcatgagga tggtctgcac caacgactgc
      481 tggtacccct tcttcatgcg ggtatggatg tagacccaga ccaccggcag catgagcagc
      541 gacgagacaa tcatcgccag gatcacggtg agactgaccc gatcccgcgc tcccgtcgtg
      601 agctggatag tgctgtccgc cgcagcgccc ggagggaact ggcccacgtc catcgggagc
      661 ccgctcccgg agacgatccg ttccgccacg cccggggcca gccggacgag gagaaccgcc
      721 accccgccca ggatgacgta gtaaatcgtg acccgcagca gcggatgacg ggaaagaggt
      781 gtggtcattc gagggtaaac atacacctaa ttaggactta ggtctaagga ctaagcactg
      841 cttgtcagta gcccatcccc aggccgagat agaacctcgc gccctcatcc ccttgagcca
      901 ttcccaggga aatcaccggc gagcgtttga gcatgctgaa gtagatgccg ccgcccaggt
      961 tgctgtgcca gtcgccggag tcggtgtcgt cgtcgaggaa gaccctccca gcatcggcca
     1021 ggccgaagat gcccagctcc cccggcacca ggatgaaagc ccgcgacacc ctgagacgga
     1081 tctccgcgtt gccgaacaca gccgattctc ccgcaaagcg gtttcgggga tatcccctga
     1141 gcgagcgggt tccacccagg taggaagcct cgaagtaggg gacctcgccg taggagtgcc
     1201 ggccgccggc gcggaaggcg aacgtgagcc aatcctggtt ccccgggctc acgaaggtgg
     1261 aggccaccgc gtccagggtg ccgaatccct cctcgtcggt cgaccaggtc accggatagt
     1321 aggccgcctc gagctggagc cgggcgccct tgctgggcag gagcgggaag tcgcgcgtat
     1381 cccactcata gcgacccacc agccccaggt ggccgtaatc gccgagcccc agcggcttca
     1441 gctcggagat ggggcccttc tggttctggg ggtcgtcggg gtcggtgacg gtgtggcgcg
     1501 cccggatgtg gaacaggagc ttgctccgac cctccagccc gaagccgagg ccgggattga
     1561 gctcgaaggc ctggtggcgc acccggtaaa agctggtgga ggatgtgtcc tgggtgtcgt
     1621 tgccgaagcc atagaactgc agctgctcga tcccggaggc gatggcgctg agggtgatga
     1681 accggttccg gttcaccgcc ttccagcgcg tctcaagcat gaatcggccg ctggtgcggc
     1741 cgaaggagta ctcggcgccc aggttgacct tcgacgaata gggctggcgc cggaaggcgt
     1801 agcccgagcg ggtccagccg tagccggccg taacacccag gtcgctggtg gcgtacacca
     1861 taggccaccc cagtgacttg gatccccagt cgcgctcggg caatctggcc gggttggtat
     1921 cggagggctg gacgtaccgt ttgcgatcga ccccccgccc caccgccacc gtgatgccgt
     1981 ccgagtcata gaaagcggag tgccggctgc gcgaactgtc gatcagcgag tcggtgcccg
     2041 cgccacccat gacccggagc atcgggccgt gaccatcgcc tcggatcacc agccggtcgt
     2101 cgccgtcacg caggtccagc tggatctcgt cggtttcatc ggcgtgaaag acccggcgat
     2161 aataagccgg tccgcgggac cgcatcagct gcacgtcggt gcggccctcg ggcagatgct
     2221 ccactaccgc gtgatcgtcc cgatcgctgg cctggagccg gacctttcgg gccagaaact
     2281 cgtaggtgcg gatcgcggcc accagcaggc catcccggcg ctggaccagc atcccgcgga
     2341 gccattcacc gttgcgagtg cggtattcga gaggcagccg gccgaccgcc gtgtcgatca
     2401 cctggtcggt gacgacccgc tgcagctcac gcgcgatgga gtcccaggtg gcccgcccta
     2461 cttccgccaa cagccggcgg tcgaggttgc gtccgttcca ggtggccgcg agcggctcgg
     2521 cgtagtcctc atcgaacact aggagctggg gggttccctg ccgggcgacc cagagcaaca
     2581 gaccgtcgta gcggacgaag gcctggtccc ggtcacgggg aatcggcagc cagcggccgg
     2641 cgttgcccgc gcccaccagg gcccaccgcc actggtcctc gtgccggtcc cagtcgccca
     2701 ggtacaggtc gagcagacgg gcagtgagga aggcctgggc gtcgactttg acccagggtt
     2761 ccttccagag cgcctcgatt agctccgggg tgtcgacgat cttgcgggcc ccggcaaagc
     2821 cgggcagatc atcatccgat tcggtgggtc gttcctccag caggcccatc tcgttggcga
     2881 actcggcccg gaactcaccc agcgcgggat cgtccggcat cacgaagaag cggggggtca
     2941 cgtgcagcac cccggccgcc tcgaggatcg gcggcaccac cagggccgcg ccgggatgca
     3001 tggcgctcat ctggtcatgc acaatgtctt tggccagcgt ctcgcgcagc tcgggcggga
     3061 ctacctgggt cgggtccttc ctcaccattc ggaagacgta ttccttgcca tcgccccccc
     3121 ggaaccggag cgacttggtc tgcagccctc cgcccttccg gagcggccgg agccccccgg
     3181 cctcgcgggc cagatcgagc ttgggcaccc ggagtgggat ggtccagaga tcgcggtagt
     3241 gatcgcctaa cagccagcgc cgcaagccgc cccggtggat gtcgggatcg gggacgattg
     3301 aaacggaatc ctgggccgag aggggagcca gggccaggcc ggccagcgcc agacccaagg
     3361 cgactcggct agcgccggcg actacagcgc tcctgactcg gctccgtgca ctcttcattc
     3421 cgggctcccg gggtaagcca gagagaatac gcctcggtcg acttgccttc caggtccacc
     3481 gtcatcaccg ccagccggac gttgccgctc cgggtggcgt cgagccgcat gtagccgctg
     3541 gcactggtgg catagcgggt cgagtccagc caggtgacgt atccgccgtg accgaagtat
     3601 cccaccccac tcaccaggag ccagcgggcc gagttgccgg ccatgacctg catcgcatgc
     3661 tcatggccgg cggcgtagac cagcggccgg tagcggcgca gggccccttc cagcagcacc
     3721 cgcatgctcc ggttccggga atgggaaatg tcctgcgggg acgccccacc gctgcgggcc
     3781 agcggatagg tcgacccgat gaccggcaac ggcaaccaga gccacgactt gaccgcgcgc
     3841 aacgggaaca ggtgatctcg cacccggaag tatccgccgt gttcgccgcc gctgcgcagg
     3901 gggtggtggg cggcgaccac cacgtgcttc ccgttggcgc cggccagggc cgtttccagc
     3961 tgggcccgca ccgccgagtc gctggtggcg gtgcaaccgt cccggccttt ttcggcgtcc
     4021 cgcaacagcc actcggtgtc gagcaggacc agccggaagc tgccgaactc gcgtacctcg
     4081 ggcccgggac agccgttagg cggcagaaac tcgacatgct cgccgcccga ctcctcgacc
     4141 gccagggcct cgcgccggac cgcgccgaag ccgtcgggcc cgctgcggtc ccaatcgtga
     4201 ttgccgggca cgaagatgcc cttcacgtcg gccgaggtca gcagcttgac ctggcggttg
     4261 atccgcgaca gggcgtcctg gtaatccacc gcctccggag ccggcaggcc ccgcggatag
     4321 atattgtcgc ccaggaacac gatcacgctc ttgtccttga gcgtcttcac atcctcttcc
     4381 accgcccgga gcaccgcgtc ggccgaggga gggccccccg cgtccccgat gagaatgacc
     4441 gagaagtcga gactgtcctc gcccaatccc ggcgccgggg aaaactggct cggctgccgg
     4501 acgcagccgc ccagggcgag caggagaatc gaggcgagta ctccctggct ccacctcacc
     4561 ggccggcctc gcaggcatac ttggcgatgg tgccgcgtcc gccgctgctc tcatcgccga
     4621 tgtacattgc gtccttggtc accgcgagcc cctcggctcg ggaatgaact tcatccctga
     4681 gccgggccac cccaacgatc cggccgttcg actccagctc cagcaccagg gcgggccggg
     4741 aggacaacag cagcagatgg ccggtgaccg ggtcgagatc gaccgaggtg gcgttgatcc
     4801 ggggcgttcc cgcggcccgc gagaggttct gagctgacac ccgaatagcc tcgcccgcgg
     4861 agcctttgcc cgccatcgac cagcgaaaga tcgtcagtcc gttcctggtg gcccgggttt
     4921 ttccgttctt gcatggaatc aacagcgcgt cggcaccgac atcccaggcc agcccctcca
     4981 gctcgcaggc ctttcccaag ccggtctcca cggtccggaa agtgacttga tcgccggcat
     5041 cggacagctt gaagacatag agtcgcccgg tgctggtcat cagcgcgatg gatttacccg
     5101 cggccgcgac accctcgaaa tcccctttgg gttggccctt cagagtgatc cgccgcagca
     5161 ccttcccgct gcccggatcc agctcgaaca gccgcccgaa ttcgtcgccg tgccccagga
     5221 tcctgccacc cggaccgatg gccaacccgg atacctcggc cagaccggag ggcaggcccc
     5281 atcgcgccac cggatcccga ttgaccgggc agcggatgcc acccgccgac tgggaatcag
     5341 cgaccgccgg agtgaggagt agagccgcga ggacgatcag tgcgagatcc ttcgctacgc
     5401 tcaggatgac ggccgctgcc ctcaggatga caagccgtcg caagggatca ccatttgccg
     5461 ttcactgttc accgttcacc gtttgctgtt ctgttcaccg ttcaccgttt gctgttctgt
     5521 tcactattca ccgctgcctc gtcaatgcac cttgaccccg accacacttt ccccgccgac
     5581 caccagcacc gcgtcctcga cctcttccgg cgtgactccc tttcgggtcc gcaccagata
     5641 cttgaggtgg gagcggccct tcttggtcga ttgaatctcg gccagggtcc aacgcttgaa
     5701 ctcccggtcc atgaaggccg gcagacgctg catggtctcg tcggccgagg tcgagcggac
     5761 caccagcacc gcgttgaagt cacccttccg ggcgtccggc ttgctgttct tgccggcgcc
     5821 gttgctgccg gcctgcgcgg catgggtgtg aagcagcgga cgggaggact tgcccagctc
     5881 gcacatgccg tagtcggccc ggttgagcag cagcacggaa tagttgaaca ctatcgacag
     5941 catggccgcc gcggccagcg cttccacccc ggccgcgaga ccgacgccga tggacaggaa
     6001 gacatagagt gtgtcacgcg tatcaggcag cgaattgcgg aatcgcaccg cccccacgat
     6061 gccggccaga ctgaaagcca gagccaggct gttccgcacg atgaccacca ccccggagac
     6121 ggccatcgcc agaatcacca gggtctggac catggtctgg tcgaagccct ttttctgcct
     6181 cgtggccatg tagacccagg agctgggcag catcagaagc agcgagccga tcatggcgcc
     6241 gcccaggtag agcgagaact gccacgagaa ccaggcgcct cccgacgggg taggattggt
     6301 gaacggcacc gcgttgccgg atccggaacc gccctggagc atcgcggcca gccgctcgcc
     6361 cgatatcaca ctccgaagat cggggaacag ccagagcagg agcgtggcga cgccgatcag
     6421 gagcacgtaa tagagcgtga tgctcaggaa ggggcgctcc gccgggtagg tgaagcgttc
     6481 cacgatctgt cgggtgaccg agctaccctg cccggctacc aggggctcaa cagcggggga
     6541 ttctgcggtg gccatgcggt ctccttcttg gctcgagcac ccctgatgga atgtaccctt
     6601 tgctttggga gataccgagc gcaccaggag ctacgacagt cggagggttt tggaccggta
     6661 acagaaaagc cgtgagcgac ctggctcacg gctggcgact ggcaactgac ggctcaagtc
     6721 cagagccact ggtcggattt gaaccgacga ccgctcgatt acgaatcgag agctctaccc
     6781 ctgagctaca gtggcgaggg ccctgcgatg ccctggctcg gattcgaacc gagacgcctt
     6841 acggcactac cccctcaaga tagcgtgtct accaatttca ccaccagggc gagggcaaca
     6901 gtatagccgt aaatgggtta ggggtcaacg ggaatctgcg cgccggcaac gatatactac
     6961 ccaattgcgt acaggtcttg acccacccga aggagagctg gatgagaggg acggcgctgg
     7021 ccctggggct caccctggcc gtggtcggag ccggatcggg gcaggatcgc cccgattcga
     7081 ctcggagaga tacgaccgcg cagctccccg ccctcgaggt ccaagggatc cggcccctga
     7141 ccacggtagg cggatcgagc gcgctccggg tccggctcga ctcggtgccc ctgccgccgg
     7201 cgcctacgct ggagcagacc cttcgccagc tgcccttcct gcacctgcgg cggaattcgc
     7261 ggggtgaggc ggagctgtcg ggtcgaggtt ccgagtcgcg ccaggtggcc gtcctggtgg
     7321 atgggatccc catcacgctg gcgtgggatg cccggaccga cgtctccgtg attccggcca
     7381 ccggcttcca ggacgtgcac tacatccggg gcctctcctc catgctccat ggccccaacg
     7441 tcctgggcgg catcatcgag gtgggcgtgg ggcaggcctc attcatgccg tcccatccca
     7501 gcgccgattt cgcggtcgga ttcgaccatg tcggaggcta cggcggtgga gcgggcatct
     7561 ccctgccact ggtgcgccct tcgggcacct ggctggtgcg cgcagggacg agcttccgcg
     7621 acaccccagg cgtcaccctg gcccggggcg tggacgagcc gctgccgacc gaccacgacc
     7681 tccggctcaa caccgatgcc gagaacatcg acgggtttgt cgcggttcgt tatgaaggtc
     7741 acggcggggg ctgggtcagc ttttcgggtt cgtcattccg agccgagcgc ggtatcgccg
     7801 ccgagttggg atatgatgac gccaggttct ggcgctaccc ccatcagtcg cggtcgctgc
     7861 tggttctgtc cggcggtacc ggcgatcgcc gctcgcccct gggcggccgg ggcgacctgg
     7921 aggccagctt cggtgtcgat ctgggccgga ccgacatcga tgcctatacc tcccgtactt
     7981 acagcgagct ggacggcttc gagaacggga aagaccgcac cctgaccctc cgcctcctgg
     8041 gcgatcagag cctgggccag cggggcgagc tccggaccgc gttcaccctc tcagagatcc
     8101 gtcacgacga gttcctcccc agcgccgacg cgcgttaccg gcaacggctc tggagcctgg
     8161 gcggcgaaac catctggcga ttggtcgacc agggccaggg aatcaactcc ctccggctga
     8221 gtctgggcgg cgcctacgat gtgggccaga cccccgagtc cggtggccgg gagccgcggc
     8281 agggaacgct ctcggaatgg ggcgcccggg tgggcctcac catggtggcg gccgatggaa
     8341 ggctgctggc ccacggcggg gtgagccggc ggggacgctt ccccgccctc cgggagctct
     8401 actccggtgc gctcgaccgc ttcgcgccca gtccggagtt gcagccggaa aacctggtgg
     8461 cgatcgaagc cggcatcacc actcggctgg gtgacaacag cgagatccag ctggtgggat
     8521 tccaccacct gatgaacgat gccgtggtgc gaatcacgct ccccgacaac cgcttcatgc
     8581 gggtgaaccg caaccggctc gagagcatcg ggatcgagct gctgggctcg accttgatcg
     8641 gcccgctggc ggtgggaggt gatctgacgc tgcagtcggt cgatctgacc gataccgatg
     8701 ccggaatcac caaccggccc gagaatctgc ccgaagcttt cggcggcgct tatgtacgcc
     8761 tccgcctgcc tctgggaatc cgcaccggca ccgagctgcg ctacaccggg agccagttct
     8821 gcatcgaccc ggcgaccggc gacgacaccg agctccagtc gggcacggtg gtcaatgcca
     8881 atgtctcccg ggagtggcgg ctccggcccg ccaatggcgg atggctgtct cggctcgagg
     8941 cccggctggc gctggacaac atcgggaacg tggcgctgta cggccaatgc cggctgccgg
     9001 acccggggcg cctggtccgc cttcaggtgc ggctgttctg atgtgggggc cgccgtgggg
     9061 gtcaacacaa cggtatcggc ctgcgtagct ttcgcaacca caacctcgag tatccgatga
     9121 gacgttgccc acccctcacc cggggcgtgt tcctcgcctc cgctatgctg atggcactgg
     9181 ccgcaggcct cccagcccag ctccccacgg ccagtctcga cagcgccctg ctggctggat
     9241 tccgctggcg caacatcggc ccagccaaca tgagcgggcg ggtcaccgac atcgaaggga
     9301 tcgggtatcc ctcccgcacc ttctacgtcg cggcggccgc gggcgggatc tggaagacca
     9361 ccaacgctgg caccaccttc gagctggtct tcgggatgaa cgcgccggtg atctcgatgg
     9421 gggacctggc gatcgccccg tcggacacca acgtgatcta cgccgggacc ggcgaagagg
     9481 actcacgcaa ctcgatctcg cccggcgccg gggtgttcaa gtcaaccgac ggcggcaaga
     9541 cctgggcgtt cgtgggtctc aaggaaaccg aggccatcgg tcggatcgtg gtgcatccca
     9601 ccgaccccaa cacggtgtgg gtcgcggcgt tgggcgccat ctggcgcagc aaccccgagc
     9661 gcggcctcta caagaccacc gacggcggca agacctggaa gctggtcaag ttcgtgagcg
     9721 acaaggccgg cttcgtcgac ctggcgatcg atcccgccaa ccccaacgtg ctgtgggcct
     9781 cgagctggga gcgggtccgc gggccctact tcctcaaggg cggcggtccc gggtccgggc
     9841 tgtggaagag caccgacgcc ggcgagacct ggacccaggt caagggcgga ggcctgccgg
     9901 tgagcaccct gggccggatc ggcatcgcga tcgcgcggag caatcccagc atcctgtacc
     9961 tgatggtcga agcggacacg atgcccaatc ccaagccgac ggcgggctcc aaagcgcagg
    10021 tgcggcccag cgggctctac aagtcgctgg acggcggcgc cacctggacc aagatgcagc
    10081 cccagaatgt gcggccgttc tactactccc aggtgcgggt cgatcccaag aaccccgacc
    10141 gggtgttctg gtcgtccacc ccggtcaact tctcgctgga cggcggtaag accgcgcgga
    10201 cggccaccca gggactgcac gtggaccacc acgcgatgtg gatcgatccc aacgatccca
    10261 gtttcatggt ggtgggcaac gacggcggga tcgggatcag cttcgacggc ggcggcaact
    10321 acatcttcaa caactcattc gccatcggcc agttctataa cgtcagctac gatatggcgg
    10381 tgccgtacaa cgtctgcggc ggactgcagg acaacggttc ctggtgcgga cccagccggc
    10441 ggcgcgggtc gatcagcaac atgcactggg tgaacgtgag cggcggcgat gggttcgtca
    10501 ccgcgcagga cccgaccgac cccaacatca tctacagcga atcgcagggc ggcaacatcg
    10561 gccggctcga cttccgcacc
//
LOCUS       DASWKS010000198         2578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1195831, whole genome shotgun sequence.
ACCESSION   DASWKS010000198 DASWKS010000000
VERSION     DASWKS010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1195831"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VGA78_05860"
     CDS             complement(<1..269)
                     /locus_tag="VGA78_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893426.1"
                     /translation="MHWRSCRDEGGTLPATLWTLAVGAVVMAPFLGQLSTSLLAGRES
                     QEELLEQYSADASVEFAIWKLQNDQSYRDSVDVAPGTPIAVAPAVT"
     gene            complement(317..799)
                     /locus_tag="VGA78_05865"
     CDS             complement(317..799)
                     /locus_tag="VGA78_05865"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9893427.1"
                     /translation="MRVRADERGFTIPEMLIATVLVASAAGLIATAIYEVFVVARSGN
                     ARLAALSDLETASLWIGRDASEAQSFAAGSGTVYGTLTTSTATIQYQYSYDSANTALV
                     REVLVSGSPTSTLQIARRIAAQGNVAFSLSGSLLTVSITSTVGPTSETTTLKLGMRVK
                     "
     gene            complement(796..1230)
                     /locus_tag="VGA78_05870"
     CDS             complement(796..1230)
                     /locus_tag="VGA78_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX9893428.1"
                     /translation="MSKLIRLLRDESRGFARDERGISLPEELMSIAILALAVGLVVVG
                     IFTASVGTKVRHARVNATSLARSQMELVLDGSYSADPTAVPYPTVAPVSGYTVAVGVE
                     YWTAPSGPFVSTVRNDGLQRVTVSVSDADGEILDLEGYVVNR"
     gene            complement(1227..2426)
                     /locus_tag="VGA78_05875"
     CDS             complement(1227..2426)
                     /locus_tag="VGA78_05875"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9893429.1"
                     /translation="MSNDGKESRGVLDVASEEAAERTLWQRELTILDLSRTRRQIDLA
                     KYFPSLLGPRPKDVILFSRQLATLVDSGVSLIAGLQLLGTQIGNKYLRRVLGEIEDDI
                     HMGASLSAAMTKHPVAFSELYCRMIETGERSGNLGPAMRQLADYEERIQVTLAKVRGA
                     MAYPLFVLVLAVFVVAILVKVALPPMVRLFEEFSAELPWPTRFLIAITNFFGEYGLTL
                     LIGAAVLSVVLFLFSRRPSGRLLLHRLVLRVPLLGKISIHGAVARLSRTLSALIKAGL
                     ALPEALSLSKETIGNLVLQEALENVRQETLQGRGLSEPLSRVKQFPPMMSYLARVGEE
                     TGTLDTHLATVADFYEQEVDRSLRVMTTVLEPALIIVVGLVVGFVAVSIMMPMYNLLG
                     AVQAGIP"
BASE COUNT          475 a          849 c          811 g          443 t
ORIGIN      
        1 gtcaccgccg gggctacggc gatcggcgtg ccgggggcga cgtccaccga gtcgcgatag
       61 ctctgatcgt tctgcagttt ccagatggcg aactcgacgc tggcgtccgc cgaatactgc
      121 tcgagcagct cctcctgtga ctcgcgcccg gccagcaggc tggtgctgag ctgcccgagg
      181 aagggcgcca tcaccactgc gccgacggcc aatgtccaca gcgtggccgg cagcgttccg
      241 ccctcgtcgc ggcaggacct ccaatgcacc gtgcctgggc ctttcagcac tcgtgcaccc
      301 aacggcggcg ctggcttcat ttaactcgca tcccgagctt gagcgtcgtg gtctcggagg
      361 ttggaccgac cgtggaggtg atcgacactg tcaacaaact gccgctcagg ctgaaggcca
      421 cattgccctg ggccgcaatc cgccgggcga tctgcagggt cgaggtcggt gaaccggaga
      481 ccaacacttc ccgcaccaaa gcggtgttcg ccgagtcgta ggagtactgg tattggatgg
      541 ttgcggtgct ggtggtcagg gtgccgtata cggttccact ccccgcggcg aagctctgcg
      601 cctcgctggc atcccggccg atccagagcg aggcggtttc gagatcgctc agcgccgcca
      661 gccgggcgtt gccgctgcgg gcgacgacga aaacttcgta aatagcggtt gcaatcagcc
      721 ccgccgccga agcgaccagc accgtcgcga tcagcatctc ggggattgtg aacccgcgct
      781 cgtcggctcg cactctcatc ggttcaccac gtagccttcc aggtcgagga tctctccgtc
      841 cgcgtccgag acgctgaccg tcacccgctg cagtccatcg ttgcgcacgg tgctgacaaa
      901 ggggccgctg ggggcggtcc agtactcgac cccgacagcg accgtgtagc cgctgactgg
      961 cgcgactgtt gggtagggca ccgcggttgg atcggcgctg tagctgccat ccagcaccag
     1021 ctccatctgc gaacgggcca ggctggtcgc gttgacccgg gcgtgccgaa ctttcgtgcc
     1081 cacactggcg gtgaaaatcc cgaccaccac caatccaacg gccagtgcca gaatcgcaat
     1141 cgacatgagc tcctcgggca gggagattcc gcgttcatcc cgcgcgaagc cgcgggactc
     1201 gtctcggagc agtcggatga gcttgctcat ggaatccccg cctgaaccgc gcccaacagg
     1261 ttgtacatcg gcatcatgat cgacacggcg acgaacccga ccaccaaccc gaccacaata
     1321 atcaaggccg gctcgagcac ggtggtcatc acccgcaagg agcgatcgac ctcctgctcg
     1381 tagaaatcgg ccacggtggc cagatgcgtg tccagagtcc cggtctcttc gcccacccgg
     1441 gccaggtaag acatcatcgg aggaaactgc ttgactcggc tcaaaggctc ggagagaccg
     1501 cggccctgca gcgtctcctg gcgcacgttc tccagtgcct cctgaagaac cagattgccg
     1561 atggtttcct tgctgaggga gagggcctcc gggagggcca gcccggcctt gatcaaggcc
     1621 gacagagtgc gcgagagccg ggcgaccgca ccatgaatgc tgatcttgcc gagcagcggt
     1681 acccggagca cgagccggtg cagcagcagg cggccggagg gtcgccgtga gaataggaag
     1741 aggaccacgc tgagcacggc cgcgccgatc agcagggtca gtccatactc tccgaagaag
     1801 ttggtgatcg cgatcaggaa gcgggtcggc cagggcagct cggcgctgaa ctcctcgaac
     1861 aaccgcacca tcggcggcag cgccaccttg accaggatgg cgaccacaaa gacggccagc
     1921 accagcacga acaaggggta ggccatggca ccccgcacct tggccagggt gacctggatc
     1981 cgctcttcat agtcggccag ctgtcgcatg gccggaccca gatttccgct gcgctcgccg
     2041 gtctcgatca tccggcagta cagctcggag aaggccaccg ggtgcttggt catggcggcc
     2101 gagagcgagg cacccatgtg gatgtcgtcc tcgatctcgc ccagcactcg gcgcaggtat
     2161 ttgttgccga tctgggtccc gagcagctgc aggccggcga tgagcgacac cccggaatcg
     2221 accagggtgg ccagctgccg cgagaacagg atcacatctt tcggccgagg accgagcagg
     2281 ctggggaagt acttggccag atcgatttgg cggcgtgtcc ggctgagatc gaggatggtg
     2341 agctcgcgct gccacagcgt gcgctcggcg gcctcttcac tggccacatc gagtaccccg
     2401 cggctttcct tcccatcgtt gctcaatgct aaatatcgat aggccatttc gatcagtcca
     2461 aagcgaacac gttgcggatc acctccgccg gagtggtgat cccttcctta actttctgca
     2521 tgccgtcccg ccgcataggg gtcattcctt gccgctcggc ctcggccttg agttcaaa
//
LOCUS       DASWKS010000199         4065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2685837, whole genome shotgun sequence.
ACCESSION   DASWKS010000199 DASWKS010000000
VERSION     DASWKS010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2685837"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..957
                     /locus_tag="VGA78_05880"
     CDS             223..957
                     /locus_tag="VGA78_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893430.1"
                     /translation="MPHPTLRPLALGELLDVSFALYRELFGSLVIVGLVTGALPLIVD
                     VYIEQRGGPASEPILWFFNLMLSMILGAIGVGASTHIVSDSYLGERLHAGAALGRVVP
                     YVGRLIALTIMTGFLVFCGLVLLIIPGIIIACGLALGATALVLEGLPSPGAALQRSWA
                     LTRGYRGKVFLALMVTFLLLMIPAVGMGVVSALLGMEALFTLASVILGVLISPFIYVT
                     VTVLYYDLRIRQEGLDLEMLSQHLRG"
     gene            957..1544
                     /locus_tag="VGA78_05885"
     CDS             957..1544
                     /locus_tag="VGA78_05885"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HEX9893431.1"
                     /translation="MDDSLRAVLDSVFASPVYDWEERTDPFAFLRRWVNFLIGSLVRW
                     GSEHPTALKLLFWILAGVVVLLLARVALAVFRGFRATREHSAPLVAPVTRDARWFRRE
                     AERLGREGRLLEAMQADFTALILEFDRRRLVRYHPSKTPQEYVREASLSPPARAELGD
                     LVWGLYRHLFAHEPVSPSAAAAWRARTSEDRYAPG"
     gene            1531..2730
                     /locus_tag="VGA78_05890"
     CDS             1531..2730
                     /locus_tag="VGA78_05890"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HEX9893432.1"
                     /translation="MRPARQALGWTVLGVLVIGAFLLGRARRPADLGDRRASTFLAGP
                     DGARGLAEGLERLDIGVERWRRRVREFILTPPAGDRFALALLDPTRGLEATEVSALAE
                     WHGTDRGGDLILVGDATDRLMECFGWVTGDLSFSNLPVAPPGRDASSSAAAIALFLEP
                     DLSVIRADAEDRLCDPVPIASVDTLLVASGDRIAAVRLHRADVPGSVLLLSDADLLRN
                     RTLRETATGSVLLSFFAGRYDRVVFDEGLHGFGASGSLAGAVLQWSRRSPWGWAVWQL
                     AIVGVLALLVGAWRFGPVRPGVERRRRSPLEHVNALATALSAAKGHDVAIAALVRGLR
                     RRLAPGRPGAAEPGEWLRDLAARTTTPKAKQSAVTLLGLSVPGQSAAAVLKAAHAVED
                     LWEEMHR"
     gene            2727..3692
                     /locus_tag="VGA78_05895"
     CDS             2727..3692
                     /locus_tag="VGA78_05895"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX9893433.1"
                     /translation="MTPDPMVRHAETAGQVLSQLSRVVLGQAAALREALIALLVRGHV
                     LLEGPPGTAKTLLVRTLAQTLGLDYRRIQFTPDLMPSDITGVNLLGGGGDFTFRPGPI
                     FADLVLGDEINRAPAKTQAALLEAMQERSVTVDGTNHPLSRYFTVFATQNPIEFEGTY
                     PLPEAELDRFMVKTLLDYPDQATEQNVLHRVLGGFEAAEPETYGVERVLDGPGLAAIR
                     EAVRQVTVDQRLLGYITALVRATRETPSLTMGASPRASVALLKLSQAAALLDGRAFAV
                     PDDVKALAPAVLRHRVVVAPELELEGVTADVALQSLIERVDAPRA"
     gene            3689..>4065
                     /locus_tag="VGA78_05900"
     CDS             3689..>4065
                     /locus_tag="VGA78_05900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893434.1"
                     /translation="MILPSRRWFVAAAALAALAPLTLVWPAGAALLLVADLGWIAALL
                     VDAWRSAAVPLRAFAPVRETPPAFSVARPLPVTYRWTNPLSYRARLTVREALPAPLRL
                     SSAAERTLDLPARGTASEPLVIEP"
BASE COUNT          524 a         1389 c         1439 g          713 t
ORIGIN      
        1 cgagggtgaa cagcgtgagg atgatggtgt ccagtatcgc ggccaatccg cgcgagccga
       61 gccccgccag ctcgtagtcg agggccacat gttccggggt ctcgatctgg agtcgctgac
      121 gccaaccgga gtagagccca gtcatgctgg gaatcatact cacaggacta aggacatagt
      181 cctctaatat tatcttctgg ttccgacccc ccgacggagc ccatgcccca ccccacactg
      241 cgaccgctgg cgctcggcga actgctcgac gtgtccttcg cgctctatcg cgagctgttc
      301 ggcagcctgg tcatcgtggg gctggtgacc ggggcgctgc ccctgatcgt ggatgtgtat
      361 atcgagcagc ggggcgggcc ggcctcggag ccgatcctgt ggttcttcaa cctcatgctc
      421 tcgatgatcc tcggagcgat cggggtcggg gccagcaccc acatcgtctc cgacagctac
      481 ctgggtgaac ggctccacgc cggcgcggcg ctgggtcggg tggtgcccta cgtcggccgg
      541 ctcattgccc tcaccatcat gaccgggttt ctggtcttct gtggcctggt gctgctgatc
      601 attcctggaa tcatcattgc ctgcgggctg gccctgggcg cgacggccct ggtcctggaa
      661 ggtctcccca gtcccggcgc cgcgttgcag cgatcctggg ccctcacccg cggctatcgc
      721 ggcaaggtct tcctggcgct gatggtcacc ttcctgctgc tcatgatccc cgcggtgggg
      781 atgggcgtgg tatccgcgtt gctggggatg gaagcgctct tcacgcttgc ctcggtgatc
      841 ctgggcgtac tgatctctcc cttcatctac gtgaccgtca cggtgctgta ctacgatcta
      901 cggatccgcc aggagggtct cgacctcgag atgctctccc agcacctgcg aggctgatgg
      961 acgactcgct tcgtgcggtg ctcgattcgg tcttcgcctc gccggtctac gattgggaag
     1021 agcggaccga tcccttcgcc tttctcagac ggtgggtcaa tttcctgatc ggctcgctgg
     1081 tccgctgggg cagcgagcat cccaccgcgc tcaagctgct gttctggatt ctggcgggtg
     1141 ttgtggtcct gctgctcgcc cgggtcgcgt tggcggtgtt ccgcggattc cgcgctaccc
     1201 gagagcactc cgcgccgctg gtagcaccgg taacccggga cgcccggtgg ttccggcgcg
     1261 aagccgagcg actcggccgg gagggccggt tgctggaggc gatgcaggcc gacttcaccg
     1321 cgctcatcct ggaattcgac cggcgccggc tggtgcgcta tcaccccagc aagacccccc
     1381 aggagtacgt gcgggaggcc agtctgagcc cgccggcccg ggccgagctc ggtgatctgg
     1441 tctggggcct ctatcgccac ctcttcgcgc acgagccggt gagtcccagt gcggcggcgg
     1501 cgtggcgcgc tcgaaccagc gaggaccggt atgcgcccgg ctagacaggc gctcggctgg
     1561 acggtcctgg gagtcctggt gatcggggct tttctgctgg gccgcgcccg ccgacccgcc
     1621 gatctgggtg accggcgcgc gtccaccttc ctggccggac ccgacggcgc ccgtggcctg
     1681 gccgaggggt tggagcggct ggacatcggg gtggagcgct ggcgcaggcg ggtccgcgaa
     1741 ttcattctga ccccgcccgc cggcgaccga ttcgcgctgg cgctgctcga tcctacccga
     1801 gggctcgaag cgaccgaggt cagcgccctg gcggagtggc acgggaccga ccgagggggc
     1861 gacctgatcc tggtgggtga tgctaccgac cggctgatgg aatgcttcgg ctgggtcacg
     1921 ggcgacctct cgttctcgaa tctgccggta gcgccgcccg gccgggacgc ttcgtccagc
     1981 gccgccgcca tcgcgctgtt cctcgagccc gatctctctg tgatccgggc ggatgcggag
     2041 gaccggttgt gcgatccggt gcccatcgcg tcggtggata cgctgctggt cgcctcgggc
     2101 gatcggatcg ccgcggtccg gctccaccgg gccgatgttc ccgggtcggt gctgctgctc
     2161 tccgacgccg acctgctgcg gaaccgcact ctgcgggaga ctgccacggg atcagtgctg
     2221 ctctccttct tcgccggccg ttatgaccgg gtcgtcttcg acgaagggct gcatggcttc
     2281 ggggcgtcgg gatcgctcgc gggcgcggtc ctgcagtgga gccggcgctc gccctggggt
     2341 tgggcggtat ggcagctcgc gatcgtcgga gtgctggcgc tcctggtcgg cgcctggcgg
     2401 ttcgggccgg tccggcctgg cgtcgagcgg cggcggcgat cgccgctcga gcacgtgaac
     2461 gcgctggcga ccgcactctc ggccgcgaag ggacacgacg tggcgatcgc ggccctggtg
     2521 cgtgggctcc ggcgccggct cgctcccggc cggccggggg cggccgagcc gggggaatgg
     2581 cttcgcgatc tggcggcgcg gaccaccact cccaaggcca aacaatccgc ggtcacgcta
     2641 ctgggcctga gcgttccggg acagtccgcg gccgcggtac tcaaggccgc ccatgcggtc
     2701 gaggatctgt gggaggagat gcatcgatga cacccgaccc gatggtgcgg cacgcggaga
     2761 cagccggcca ggtgctgagc cagctgagcc gggtggtcct gggtcaggcg gccgccctgc
     2821 gcgaggccct gatcgcgctg ctggtgcggg gccacgtgct gctggaagga ccaccgggca
     2881 ccgccaagac actgctggtc cggaccctgg cgcagacgtt aggcctggac taccggcgca
     2941 tccagttcac ccccgatctc atgccgtccg acatcaccgg ggtgaatctg ctgggcggcg
     3001 gaggcgactt caccttccgg cccgggccca tcttcgccga cctggtgctg ggtgacgaga
     3061 tcaaccgcgc gccggccaag acccaggccg cgctgctcga ggccatgcag gagcggtcgg
     3121 tcacggtcga cgggaccaac cacccgctca gccggtactt caccgtcttc gccacccaga
     3181 atcccattga attcgagggg acctacccgc tgcccgaagc cgagctggac cgcttcatgg
     3241 tcaagacgct gctcgattac cccgaccagg cgaccgaaca gaacgtgctc catcgggtgt
     3301 taggcggctt cgaggcggcc gagccggaaa cctacggcgt cgagcgggtg ctggatggtc
     3361 ccgggctggc tgcgattcgg gaggcagtga ggcaggtgac ggtggaccag cgcctgctgg
     3421 gctacatcac cgcgttggtt cgggccaccc gggagactcc ctcgctgacc atgggcgcgt
     3481 cgccccgggc cagcgtggcc ctgctcaagc tctcgcaggc ggcggcactg ctggacggcc
     3541 gcgccttcgc ggtgccggac gacgtgaagg cattggcccc cgcggtgctg cgccaccggg
     3601 tggtggtcgc gcccgagttg gagctcgaag gcgtcacggc cgacgtcgct ctccagagcc
     3661 tgatcgaacg ggtcgacgcg ccccgggcat gatcctcccg tctcggcgct ggttcgtggc
     3721 cgctgcggcg ctggccgcgc tggcccctct gactctggtg tggccggccg gcgccgctct
     3781 gctgctggtg gcggacctgg ggtggatcgc agcgctgctg gtggacgcct ggcgcagcgc
     3841 cgccgtgccg ctccgggcct tcgcgccagt gcgggagacg ccgcccgcgt tctcggtcgc
     3901 gcggccgctg ccggtcacct atcgctggac caatccgctg tcctatcgcg cccggctgac
     3961 ggttcgggaa gcgctgccag cgccgcttcg gctcagcagc gcggccgagc gcacgctgga
     4021 cctgccggcc cgggggacag ccagcgagcc actggtgatc gaacc
//
LOCUS       DASWKS010000200         9634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1956651, whole genome shotgun sequence.
ACCESSION   DASWKS010000200 DASWKS010000000
VERSION     DASWKS010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9634
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1956651"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VGA78_05905"
     CDS             complement(<1..283)
                     /locus_tag="VGA78_05905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893435.1"
                     /translation="MTSARSPHRSPRLTPPPGRFIFAALLLTLGLAALLGFNVMVTAR
                     YHRSVAEGVLRDYAGFAATELEARVQSALAQRIFPLLSVLAARGAGARDG"
     gene            424..1227
                     /locus_tag="VGA78_05910"
     CDS             424..1227
                     /locus_tag="VGA78_05910"
                     /inference="COORDINATES: protein motif:HMM:NF033196.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9893436.1"
                     /translation="MRKRRWLATAAIIWLAGPGRPAVAAQIPDSFTNLKVLPRDIRRD
                     SLVQIMRGFSLSLGVRCQYCHVGGDGVSFEGVEFAKDDDPDKLKARFMLQMVDSLNRV
                     VLPKLPGLSRPPLRVECKTCHRGASRPLLLTQLLERVRDSAGIEAAVSRYRQLRQNQS
                     TAGRYDFGDEWEVNLWAERLAAAGRTTDAIAVYLLNLEFFPQSGSILVALGQLHEPID
                     RPKAIEYFERALTLQPRNTQLQRRLERLKADTTRHEVGRVGRIGRVGMP"
     gene            1434..2396
                     /locus_tag="VGA78_05915"
     CDS             1434..2396
                     /locus_tag="VGA78_05915"
                     /inference="COORDINATES: protein motif:HMM:NF040149.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5700 domain-containing putative Zn-dependent
                     protease"
                     /protein_id="HEX9893437.1"
                     /translation="MVTDEARAVLELLARLAEGQEPGEAAWQRLFESEGYRRLKQREL
                     SLDRPFDDSAFRAFVRSNALLARAGALRRTLMTWTQVDPGAAALHAFAYLPPGAVIHA
                     NVYPVIKPRTNSFVFEPRSNPAIFLYLDPAVSPAKLDNTLTHELHHIGVGSVCPAEMP
                     DSTLPPPVRTAHAWMGGFAEGRAMLAAAGDPAIHPHQTSDSAERAIWDRDLAHVDRDL
                     RRLEEFFLTLLDGRLSEDEQTREGMSFIATEEVPQGPYYTVGWVMASTVERRLGRKRL
                     VATLCDPVAFLSDYNAAARTRNRTRASRLPIWSDSLFNRLRASR"
     gene            complement(2426..3850)
                     /locus_tag="VGA78_05920"
     CDS             complement(2426..3850)
                     /locus_tag="VGA78_05920"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9893438.1"
                     /translation="MHLFVAGLVPLLAGCADVFDRLVRKVEQNYAGYLLEVVGDRRAG
                     CDRHRDRIRARADATEGDDCYFVLRDFIAYFNDPHLFIFQSTRLDSAESARRARDVDL
                     TGLTEPAVRQDLARRRSRLDPLEGIWSDGTLRVAVVPEATDRPQLIAVVLTSDTAIWR
                     AGAVRARFTPRGDGGYDGEVWERNFSRRHVEARIHKRVLLRLSPGIWGKEYPVAPADS
                     GLVDRVNPHRATIRTGNGTVVISIPSHDPAYRPALDSLVEGHAQALRSAQRLIVDLRG
                     NEGGSAGTTNRLLPYLMSAELRPSLLPAGTAVMLSSDDQIAYVQRFMVYGPDTLPTIQ
                     RLLSRLRANPGRLVPVEDSLDTPQPQPDSVIQGPVRVGIIVDGGTVSAAEAFLLRAMR
                     STRVTVFGENTGGALDYQSVFIVPFQAERPSRWLLGYPTITARADLPKGGIKGRGIEP
                     QVKLDLAREADVLGSIERHLVSGR"
     gene            4026..4709
                     /locus_tag="VGA78_05925"
     CDS             4026..4709
                     /locus_tag="VGA78_05925"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9893439.1"
                     /translation="MAQELDGKHVVITGGDGALGQAVVQAFAGAGAVCHLPIHGPVES
                     APAAGVHLTGGVDLTDETAVEAFFASLPSLAASVHLAGGFQSNPIVETSRADLQQQLD
                     INLVTAFLCCREAVKAMRKHGGGRIVNVGSRAVEVPGRDQVAYTISKAAVAALTRALA
                     VEVRGEGILVNAVLPSIIDTPANRAAMPNAQTERWPKPADIARTILWLASPENRLTSG
                     ALIPVYGNA"
     gene            4793..5356
                     /locus_tag="VGA78_05930"
     CDS             4793..5356
                     /locus_tag="VGA78_05930"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HEX9893440.1"
                     /translation="MAGWPRDVQPAGQPELDQLIPLVYHELRAIAHRELLHDQRDRTL
                     STTELVHEAYLRLSQDPRVTTRGRGYFFAAASQAMRRIVVDCARRKRRLKRGGGLRLV
                     TLDDAPDSRDGAGIDVLDLEQGLGELAAIAPRAAQVVECRFYGGLDVEQTALAVSVTT
                     RTVHRDWAFARAWLFDYLQRHPPDGKS"
     gene            5353..8091
                     /locus_tag="VGA78_05935"
     CDS             5353..8091
                     /locus_tag="VGA78_05935"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9893441.1"
                     /translation="MNRQDWTEIGDLFAAALEQPPGDRARFVLERCGERPDWLEAVNR
                     LLAAERSADSGFLDGLDPGLLVALRADAAAPEQVGAYRLLRQIGTGGMGQVFLAERAD
                     GQFEQRTAVKLLKRGMDSDAVLTRFLRERQILAGLDHPHIARLLDGGVADDGRPFFVM
                     ELVDGQPITRYCDDRRLTTDQRLALVRTVCLAVEYAHRNLVVHRDLKPSNILVTAEGE
                     PKLLDFGIAKLLSAAEGDAPATTLTRAGGQLLTPEYAAPEQFRGGPVTTSTDVYSLGA
                     VLYELLTGERPFPGSGIEDRLGQVELEPPPMSSRVSGPERRRRLAGDLDVIVAKALRA
                     SPERRYPSMEGLREDLRRHQERLPVMARPDTLGYRASRFIRRHRAAVVSAAVIAVLVL
                     LFGLTATLQAVRIRRQSDELAAERDRARREATAAQEVSDFLVGVFQVSDPQIEGLGDS
                     VTARQLLDRGAAQIDAGLADQPELQARLLGVIGRAYTHLLHPEQAEPLLLRGVELWRS
                     VGTRESSGLVAALQQLADTRTRRGDFPGAEQALRQALALPTPNGSRGSVSWPLYVDLA
                     TMFHAQGAVERARPAADTALRLYHEHASTPLTTSRSDLARLAQLLTYTKQWDEMEEVY
                     ARLVDLEARERGPRSAAVALLYNRWAGGRIIRGNRQAADSLHQTALAIQRELAPRSVA
                     TARTLSLIASNALWLGTLDQADSLSQAAIEIYLEKLGEDHPTLSGERARRAEILRHRG
                     RHEDAVELFQLALASYRRSGERSRSLVPGAEWRLAVALRDAGRPAESLTLFRSALAHF
                     EKRYPADFLSTAQLRRDYGTAFVALGRGREAEALLRRAIAVLGKRFGPADYRVDGPRI
                     TLGRALTALGRRAEADTLLQGVEARLTQARGPADSLTQRARAARDALRRARSRPPA"
     gene            complement(8109..8234)
                     /locus_tag="VGA78_05940"
     CDS             complement(8109..8234)
                     /locus_tag="VGA78_05940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893442.1"
                     /translation="MSYPGGGCDLFRMNPDGTSITELTFDGAAGVVCNVVTSWYR"
     gene            complement(8345..8503)
                     /locus_tag="VGA78_05945"
     CDS             complement(8345..8503)
                     /locus_tag="VGA78_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893443.1"
                     /translation="MTSRTGGPAGVVPVAIRLALWIRVSRRGGAGLGDYDIFVMREDG
                     TEVSPAHQ"
     gene            complement(8908..>9634)
                     /locus_tag="VGA78_05950"
     CDS             complement(8908..>9634)
                     /locus_tag="VGA78_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9893444.1"
                     /translation="GAGRLTPIRQVAEVGFETDVPEIRRVDRERAVTVTSFVRTGSNT
                     DRVTRQVLAALDSLALPPGYRIVPAGEIESRQESFGGIGSAMIVATFMILAVLVLEFK
                     TFRGTLIVASVIPLGVMGGILALFLTGNTLSFTALIGFVALIGIEIKTSILLVDFTNR
                     LRVDGMELEDAIRRAGEVRFLPIVLTSLTAIGGLLPLALQGHALYAPLAWVIIGGLVS
                     STILARIVTPVLYQLWPPAMQAS"
BASE COUNT         1537 a         3361 c         3221 g         1515 t
ORIGIN      
        1 gcccgtcccg ggctcccgcg cccctggctg ccagcacgct caagagcggg aatatccgtt
       61 gcgccagcgc agactggacc cttgcctcca gctccgtcgc ggcgaacccg gcgtaatccc
      121 gcagcacccc ttcggccacc gagcgatgat agcgggccgt gaccatcacg ttgaaaccga
      181 gcagcgcggc cagaccaagg gtcagcagca acgcggcaaa gatgaaccga cccggcggtg
      241 gtgtgagcct gggggagcgg tgtggtgacc gggcggatgt catggggcaa cttacatact
      301 aacccgccca gagagccggt cgcttttcct aaccatttcc tgacaaaggg cggaccggat
      361 ccccaccccg ctggcgcgcc cagagacgta gtgttgtccg ggaaagtcca cactggagaa
      421 atgatgcgga agcggaggtg gctcgcgacg gctgcgatca tctggctcgc cggacccggc
      481 cggccggccg tcgcggcgca aataccggac agcttcacca acctgaaggt gctgccgcgg
      541 gacattcggc gcgacagcct ggtgcagatc atgcgcgggt tttccttgtc gctcggggtg
      601 cggtgccagt actgccacgt gggcggtgac ggcgtctcct ttgagggcgt cgaattcgcc
      661 aaggacgatg atcccgacaa actcaaagcc cgtttcatgc tgcagatggt ggacagcctc
      721 aaccgggtgg tgttgcccaa gctccccggc ctttcccgtc cgccgctccg ggtcgaatgc
      781 aagacttgtc atcggggcgc ctctcggccc ctgctgctga cccaactcct cgagcgggtc
      841 cgcgactcgg cgggaatcga ggcggcggtg tcccgctacc gccagctacg gcagaaccag
      901 tcaacggcgg ggagatacga tttcggcgac gagtgggagg tcaatctctg ggccgagcgg
      961 ctggcggccg ccgggcgaac gacggacgcg atcgcggtct acctgctcaa cctcgagttc
     1021 ttcccccaat cgggttcgat cctggttgcg ttgggccagc ttcacgagcc gatcgaccgt
     1081 cccaaggcga tcgagtattt cgagcgggcg ttgacgctcc agccccgcaa cacccagctc
     1141 cagcggcgat tggagcggct caaggccgat accacccggc acgaagtcgg aagggtcgga
     1201 aggatcggaa gggtcggaat gccctgagcg gcagccgtcc aggccagcca cgcattcctg
     1261 ccagaaggcg aatccgttca ggaacgagta ctcttcggct cgccctgcgg ttcgacgaca
     1321 agacggctca agcaatgccc gtattgctct cgaagtccgg cctgccgagg ctggctctgg
     1381 tgctcgtgct ggcctgccgg acgcagtcac cggaaccccg gctgcgagtg cccatggtca
     1441 cggacgaggc ccgggccgtc ctcgagctgc tcgcccgcct tgccgagggc caggagcccg
     1501 gggaagcggc ctggcaacgg ctatttgaga gcgagggcta tcggcgactg aagcagcgag
     1561 agctctccct ggaccgtccg ttcgacgaca gtgcgttccg agccttcgtc cgctccaatg
     1621 cgctgctggc ccgagcgggc gcgctccgcc ggactctcat gacttggacc caggtggacc
     1681 cgggcgccgc cgccctccac gccttcgcct atctgccgcc gggtgcggtc atccacgcaa
     1741 atgtctaccc ggtcatcaag ccgcggacca attctttcgt cttcgagccg cgtagcaacc
     1801 cggcgatttt cctgtatctc gatccagcgg tgtccccggc caagctcgac aacaccctca
     1861 cccacgagct gcaccacatc ggcgtgggca gcgtatgtcc ggccgaaatg ccggactcga
     1921 ccctgccacc gccggtccgc actgcgcacg cgtggatggg aggcttcgcg gaaggtcgcg
     1981 ccatgctggc ggcggcgggc gacccggcga tccaccccca ccagaccagc gattcagccg
     2041 agcgggccat ctgggaccgg gacctggccc acgtcgaccg cgacctgcgc cgcctcgaag
     2101 agttcttcct caccctgctc gacgggcgcc tcagcgaaga cgagcagacc agagaaggta
     2161 tgagcttcat cgccaccgag gaggtgccgc aggggcccta ttatacggtc ggctgggtga
     2221 tggcctcgac cgtcgaacgc cggttgggcc ggaagcgttt ggtcgcgacg ctctgtgatc
     2281 cggtcgcttt cctgagcgac tacaatgcgg cggcccgcac ccggaatcgc acccgggcct
     2341 cccgcctgcc gatatggtcc gactcgctct tcaaccggtt gcgcgcgtcg aggtaaggcg
     2401 gggtcggttg cgcccattcc cccgctcacc gtcctgacac caggtgccgc tcgatgctgc
     2461 ccaacacatc ggcctcacgc gccagatcga gtttcacctg gggctcgatg cctcggccct
     2521 tgatcccgcc tttcggcagg tcggcccgcg cggtgatggt gggataaccc agcagccagc
     2581 ggctgggccg ctcggcctgg aacggcacga tgaaaacgct ctggtagtcg agggcgccgc
     2641 ccgtgttctc gccgaagacc gtgacccggg tactccgcat ggcgcggagc aggaacgcct
     2701 cggccgcact gaccgtaccg ccatcgacga tgatgcccac ccgcaccggg ccctgaatca
     2761 ccgagtccgg ctgcggttgc ggggtgtcga gcgagtcttc caccggcacc aggcggcccg
     2821 ggttggctcg cagccgcgac agcaaccgct ggattgtggg gagcgtgtcc ggcccgtaca
     2881 ccatgaatcg ctggacatac gcgatctgat cgtctgagga caacatcacc gcggttcctg
     2941 ccggaagcag cgaggggcgc agctccgcac tcatgagata cggcaacaac cggttggtgg
     3001 ttcccgccga gcctccttcg tttccccgca ggtccacgat gagtcgctgg gcgctccgca
     3061 gcgcctgggc gtgaccctcg accagactgt ccagagccgg gcggtatgcc ggatcgtgcg
     3121 aggggatgga tataacgacg gtgccattcc ccgtccgaat ggtcgcccga tggggattca
     3181 cgcggtcgac caatcccgag tcggccggag cgaccggata ctccttcccc cagatcccgg
     3241 gcgagaggcg aagcagcacc cgcttgtgga tccgggcttc gacgtgacga cgggagaaat
     3301 tccgctccca gacttcaccg tcgtagccgc cgtcgccgcg gggcgtgaac cgggcccgca
     3361 cggcgcctgc cctccagatg gccgtgtcgc tggtgagcac caccgcgatg agctgggggc
     3421 gatctgttgc ctcgggaacc acggccaccc gcaaggtgcc gtcggaccag atcccttcca
     3481 ggggatcgag ccggctccgg cggcgcgcca gatcttgccg gacggccggc tcggtcaggc
     3541 cggtcagatc gacgtctcgc gcccggcgcg cgctctcagc cgagtcgagt cgggtgctct
     3601 gaaagatgaa gaggtgggga tcgttgaaat aggctatgaa atcccgcagg acgaagtagc
     3661 agtcatctcc ctcggtcgcg tcggcccgcg ccctgattcg gtcgcggtgc cggtcgcacc
     3721 cggcgcgcct gtcgcccacg acctccagca gatacccggc atagttctgc tccaccttgc
     3781 gaaccagccg gtcgaaaacg tcggcgcacc cggcgagcag cgggaccaga ccggccacga
     3841 aaaggtgcat gacccattcc ggaagttggg ggacctgctc tctagacggg tggcgagtaa
     3901 gaagggttgc ccggcggcag gcgagcgcga cctcgcggcc gcttgccggg gtttctgtct
     3961 cgcgcgattg ttcgtcatgc ggaattcggc ctgatggctc tgtcctcaca tgagggggag
     4021 gaagcgtggc acaggagctc gacggcaagc acgtagtgat caccggcggc gatggtgcgc
     4081 tgggacaggc cgtggtacag gcgttcgccg gcgcaggggc ggtctgtcat ctccccattc
     4141 acgggccggt ggagagcgcg ccggcggcag gcgtgcacct caccggtggc gtcgatctca
     4201 ccgacgagac cgcggtcgaa gccttctttg cgagcttgcc gtccctcgcc gcctcggtcc
     4261 acctggccgg tggcttccaa tccaacccga tcgtcgagac gtctcgggcc gacctccagc
     4321 agcagctcga catcaatctg gtcaccgcct ttctctgctg ccgcgaagcc gtcaaggcga
     4381 tgcggaagca cggcggcggc cggatcgtga acgtgggctc ccgggcggtc gaggtaccgg
     4441 gtcgggacca ggtggcctac accatttcca aggccgcggt cgccgccctc acccgggcgc
     4501 tggccgtcga agtgcgaggc gaggggatcc tggtcaacgc cgtcctgccc tcgatcatcg
     4561 acacccccgc caaccgggcg gcgatgccta acgcccagac ggaacgctgg cccaagccgg
     4621 ccgacattgc ccgaaccatc ctgtggctgg cgtcacccga gaaccggctg acctcgggcg
     4681 ccctgatccc ggtgtacggt aacgcctagc ggcctcatct ttacgcctcc ccgcgcgcgc
     4741 cgtatgatga aaccgggtac tccctcccat gcacccaccc gagagtgatc caatggccgg
     4801 atggccgcgg gatgtccagc ccgccggaca acccgaactc gaccagctga tcccgctggt
     4861 ctaccacgag cttcgggcca tcgcccaccg ggagttattg cacgaccagc gggaccggac
     4921 cctttcgacc acggaactgg tgcacgaggc ctacctgcga ctgtcgcagg atccacgggt
     4981 gacgacccgg ggccggggat acttcttcgc cgcggcgtcc caggccatgc gccggatcgt
     5041 ggtggactgc gcccgccgca aacgccggct caagcgcggg ggcggccttc gcctggtcac
     5101 gctggacgac gctcctgaca gccgtgacgg tgccgggata gatgtgctgg atctggagca
     5161 ggggctgggc gaactggctg cgatcgctcc ccgggcggcc caggtggtcg agtgtcgctt
     5221 ctatggcggc ctggatgtcg agcagacggc cctggcggtc agcgtcacca cccgcaccgt
     5281 ccaccgcgac tgggccttcg cccgggcctg gttgttcgac tatctccagc gccatccgcc
     5341 tgacggcaag tcatgaaccg gcaggactgg accgaaatcg gtgatctgtt cgccgcggcg
     5401 ttagagcaac cgcccggcga tcgcgcccgg ttcgtcctgg agcggtgcgg cgaacgcccc
     5461 gattggctcg aggcggtcaa ccgcctcttg gcggcggagc gctcggcgga ttccggattc
     5521 ctggacggcc tcgaccccgg gcttctggtc gcgctgcgtg ccgacgcggc ggctcccgaa
     5581 caagtcggcg cctatcgtct gctccgccag atcggcaccg gcgggatggg gcaggtcttc
     5641 ctggccgagc gggccgacgg tcagttcgag cagcggacgg ccgtcaagct gctcaagcgc
     5701 ggcatggatt ccgatgccgt actgacccgc ttccttcgcg agcggcagat cctggccgga
     5761 ctggaccatc cccacatcgc ccggttgctg gacggcggcg ttgccgatga tggccgcccc
     5821 ttcttcgtga tggaattggt ggatggccag ccgatcaccc gatactgtga cgaccgccgg
     5881 ctgacgaccg atcaacgcct ggccctggtg cgcaccgtgt gcctggcggt ggagtacgcc
     5941 caccgcaatc tggtggtgca ccgcgacctc aagccgtcca acatcctggt gaccgccgag
     6001 ggcgagccca agctgctgga cttcggcatc gccaaactcc tgtcggccgc ggagggggac
     6061 gctccggcca cgaccctgac ccgcgccggc ggccagttgc tgacaccgga atacgcagca
     6121 ccggagcagt ttcggggcgg gcccgtcacc acatccaccg acgtctacag cctgggcgcc
     6181 gtgctctacg agttgctcac cggggagcga ccctttcccg gttccggcat cgaagaccgc
     6241 ctcggccagg tggagctgga acccccgccg atgtcgtccc gggtgagcgg gcccgagcga
     6301 cggcggcgac tggcgggcga cctcgatgtc atcgtggcca aggccctccg cgcctcgccg
     6361 gagcgccgct atccgtccat ggagggcctg cgggaagacc tgcgccgcca ccaggagcga
     6421 ctgccggtca tggcccggcc ggacaccttg gggtaccgcg cctcgcgatt catccgtcgc
     6481 catcgcgcgg cggtggtgtc ggcggcggtg attgccgtgt tggtgctgct cttcgggctg
     6541 accgccaccc tgcaggcggt gcggattcgc cggcaatccg atgagctcgc ggccgagcgc
     6601 gaccgggccc ggcgtgaggc cacggcggct caggaagtgt cggacttcct ggttggtgtg
     6661 ttccaggtct ccgatcccca gatcgaggga ctgggcgact cggtgacggc ccggcagctg
     6721 ctggaccggg gcgcggcaca gatcgatgcc gggctggcag accagcccga gctccaggcc
     6781 cggctgttag gcgtcatcgg gcgggcctac acccatctgc ttcatccgga gcaggccgaa
     6841 ccgctgctgc tcaggggggt ggaactgtgg cgctcggtgg gcacccggga gagttcgggc
     6901 ctggtcgccg cgttgcagca actggcggac acccgaaccc gacggggcga cttccccggc
     6961 gccgagcagg ccttacgcca ggcgttggcc ctgccgaccc cgaatggttc tcgcgggtcc
     7021 gtgagctggc cgctgtatgt cgatctggcg acgatgttcc acgcgcaggg ggcggtggag
     7081 cgggcccggc ccgccgccga taccgcattg cgcctctacc atgagcacgc gtccaccccg
     7141 ctcaccacca gccgaagcga cctcgcccgg ctggcccagt tgctgaccta cactaagcaa
     7201 tgggacgaga tggaggaggt ctatgcccgc ctggtggatc tcgaggcgcg cgagcgcggt
     7261 ccccggagcg cggcggtggc cctcctctac aatcggtggg cgggcggacg gattattcgg
     7321 ggaaatcgcc aggccgccga ctccctgcac cagacggccc tcgccatcca gcgggagctg
     7381 gcgccgcgct cagtcgccac tgcgcggacg ctgagcttga tcgcgagcaa tgcgctctgg
     7441 ctcggaaccc tcgatcaggc ggattcactc tcgcaggcgg cgatcgagat ctacctcgag
     7501 aagttaggcg aggatcatcc cacgctgtcc ggcgagcgcg cccgccgggc cgagatcctg
     7561 cggcaccgcg gccggcacga ggacgcggtg gaattgttcc agctggcact ggcgagctat
     7621 cgccggtcgg gagagcgctc ccgctcgctc gttccgggag cggagtggcg cctggcggtc
     7681 gccctccggg acgccggccg gccggcggaa tcactcaccc tgttccggag cgcgctggcc
     7741 cacttcgaga agcgctaccc ggctgatttt ctctcgaccg cacagctccg ccgcgattac
     7801 ggtaccgcct tcgttgcgct gggccgcggc cgggaggcgg aggccctgct ccgccgcgcc
     7861 atcgcggtgc tcggcaagcg cttcggcccg gccgactacc gggtggatgg tccccgtatc
     7921 acactgggcc gcgccctcac cgcgctgggc cgccgagccg aggccgacac cctgctccag
     7981 ggagtcgagg cccgcctgac acaggctcgc ggcccggccg actcgctgac ccaacgagcc
     8041 cgcgcggcgc gggacgcgct ccggcgggct cgatcccggc ctccggcctg acgccggacc
     8101 ggcgaggttc agcgatacca ggacgttacc acattgcaca ccactccggc ggctccgtca
     8161 aacgtcagct cggtaatact ggtcccatcg ggattcatcc ggaacagatc gcacccgcct
     8221 ccgggatagc tcatggtgaa tgcgatttgc ctggcgtccg gtgatacggg gttggaatcc
     8281 acattcggcg tggggttcag ctccaccacg gggtgaccag tcaggatcgt gttcgtcggc
     8341 cggatcactg gtgagccggg ctcacctcgg tgccgtcttc ccgcatcacg aagatgtcgt
     8401 aatcgccgag cccagcgccg ccgcgccgtg atacacgaat ccacagtgcc aacctgatgg
     8461 ccaccggcac caccccggcc ggaccacccg ttcgcgatgt cattatgcct ccgtatggca
     8521 ggagttggag ccggcgcgat gcttgggccg gttcactggt cacgctaccc tacctgcgcg
     8581 gccgggctgc ccggggggac atcagcccca gggccaggcc ctggttcgcc cgacctctcc
     8641 cgaatcggtt cgtcgcgatc cgtggtcgct gcggggccga cgcggggcct agtacgcggc
     8701 agcatgagcc cagctaaccc gtgagcgaat tccccgcgca cgagggcctc gcggaggcag
     8761 ccgcagcgac cacggatcgc gacgttaccc caccccagcg ggaacgaaat gaacgcgatc
     8821 cgacctccgc ccggggacac gtcgggtgaa aatccgacca ggcgttgttg gtcagttgaa
     8881 ccgcttcggt cccgtcggct cccgggttca cgacgcctgc atcgccgggg gccacagctg
     8941 gtacagcacc ggcgtcacga tgcgggccag gatggtggat gagaccagcc cgccgatgat
     9001 gacccatgcc agcggcgcat agagggcgtg gccctgcagc gccagcggca gcaggccgcc
     9061 gatggccgtc agactggtca ggacgatcgg caggaatcgc acctcaccgg cccggcggat
     9121 agcgtcctcc agctccatgc cgtccacccg aagccggttg gtgaaatcca ccagcagaat
     9181 cgaggtcttg atctcgatcc cgatcagcgc cacgaaaccg atcagggcgg tgaacgacag
     9241 cgtgtttccc gtgaggaaca gcgccaggat gccgcccatg acgccgaggg gaatcaccga
     9301 cgccacgatc aaggtgccgc gaaaggtctt gaactcgagg accagcaccg ccaggatcat
     9361 gaaggtcgcg acgatcatcg cgcttcctat cccgccgaag ctttcctgcc ggctctcgat
     9421 ctcgccggcc ggcacgatcc ggtacccggg aggcagcgcg agggagtcca gcgcggcgag
     9481 gacttggcgc gtcacccggt cggtgttgga gccggtccgg acgaagctgg tgacggtcac
     9541 cgcgcgctcc cggtccaccc gccggatctc cggcacgtcg gtctcgaagc ccacctcggc
     9601 cacctgccgg atgggcgtga gccgcccggc gccc
//
LOCUS       DASWKS010000201        11938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1579357, whole genome shotgun sequence.
ACCESSION   DASWKS010000201 DASWKS010000000
VERSION     DASWKS010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11938
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1579357"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /locus_tag="VGA78_05955"
     CDS             complement(<1..977)
                     /locus_tag="VGA78_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX9893445.1"
                     /translation="MASKIIGIDLGTTNSVVAVMEGGDPVVIPNAEGGRTTPSVVAFT
                     KDGERLVGQVAKRQAVTNPRQTVFSIKRFMGRRMDEVQEEARRVPYPIKPGPNGLAAV
                     EIAGKTYTPPEISAMVLQKMKQTAEDYLGHSVERAVITVPAYFNDAQRQATKDAGKIA
                     GLEVLRIINEPTAAALAYGLEKKKEEKIAVFDLGGGTYDISILELAEGVFEVKSTNGD
                     THLGGDDFDQRLIDWLVGEFKKDQGIDLSKDPMALQRLKEAAEKAKMELSSTQSTDIN
                     LPFITADQSGPKHLNLTLTRAKFEQLVDDLVRRTIPPMEQALKDAGLKPS"
     gene            complement(1162..2805)
                     /locus_tag="VGA78_05960"
     CDS             complement(1162..2805)
                     /locus_tag="VGA78_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893446.1"
                     /translation="MAGTWTALCFAATTLAAQQPAPLAPGELAAWQEDLQVLATELPK
                     RHKNAFAHLTRAQWDSAVGVLDSRLPRLRRHEVIVELMRLVALVKDGHTFLAPDFEDR
                     IGFHQLPIRLYDFADGLYIIAADGRHADLAGARVVSLGRATAPDALAAVTAIVSHESP
                     GWARFRGAAFLAMPEVVAGLGLSDDPARTTLVVERNGQQRTVTLEAAGPAAAPGPPGR
                     QEPAGWVDMRQATPGKDPLWLERPEAPFWFTILPDRTLYIGYREVQFFAAGETNEQFF
                     RRAFAAGDSAAVERVVLDIRANGGGNNFLNRFLVRELIRRPALDRTDRLMVLIGRATF
                     SAAQNLVNELDYYTSATFVGEPTGNAPNQYGDARRLELPRSRLRVFVSSLYWQGHVAA
                     DARPAFTPDVFVEMTAADYRARRDPLLAAALRWATGPTLAQRLSPDAARGDTAAVQRL
                     MAVYRAHPENRFRDVEDDVNRAGYDLLGTGQVEAAVTVFRVNATLFAASANVHDSLGE
                     ALERAGRRDEAIGSFRRALTLNPGLGSSRDALRRLGALP"
     gene            complement(2809..3042)
                     /locus_tag="VGA78_05965"
     CDS             complement(2809..3042)
                     /locus_tag="VGA78_05965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893447.1"
                     /translation="MGYRRFVDRDGHQWEVRARSRDEWELDPVGDNPHRPRMTRSPGY
                     EKDPFELSIEELQQLLDGSDPGSTRKVKSPFKE"
     gene            complement(3048..3614)
                     /locus_tag="VGA78_05970"
     CDS             complement(3048..3614)
                     /locus_tag="VGA78_05970"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9893448.1"
                     /translation="MGSLIRAAATGAACLALAAVPAAAQQPTGVMADLLTDLKEAQDK
                     IVGLAKAMPESGWTWRPGAGVRSTGEVVQHLAADNYLIPAVFGAAPPATTGIKAEDYK
                     TVQAYETRKIDRAAAIAELEASFAHLRKTMMDTPASALGEKINAFGQSYTKQQMWVLA
                     TTHVHEHLGQLIAYARSNNVVPPWSRGN"
     gene            complement(3673..4650)
                     /locus_tag="VGA78_05975"
     CDS             complement(3673..4650)
                     /locus_tag="VGA78_05975"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893449.1"
                     /translation="MTVIDVHNHYYPPVFIEALRQGESALSVHDDAEGNPVLYSPGDA
                     NIAVRGHRDLAYREEVLDREKVDHQVISLTCPGTLLETPARSAQLARLVNDAFAVVMA
                     ERGQRFTALATLPLNDPPAAVQEFERVHRLGFKGCMVFGNVNGIPLADERFWPLYQRA
                     SDAGAILYIHPTFPLGVEAMQEYWLMPLVGFLFDTTLAATHLVFSGVPERFPGIRWVL
                     GHLGGTIPYLAERLDRGYRAFAECRVNIPEPPSTYLKRFYYDTVNFDPGALQLAVEFA
                     GADQILAGSDYPHQIGSIKRMRQSITGLSLPEEHRARILGGNAARLLAL"
     gene            complement(4647..5939)
                     /locus_tag="VGA78_05980"
     CDS             complement(4647..5939)
                     /locus_tag="VGA78_05980"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9893450.1"
                     /translation="MPHATALVVGTIIGASIFVQPSEITARVPSVTGILAVWLVAGAI
                     TLCGALVCAELASTFTRTGGVYVYLSEAYGPSTGFLWGWAMFWSMHSGIIAAIAVVFS
                     RYAGYLVPMGPVASKAVAIGVILLLSAVNYVGVRQGSRLQTGFTAGKLVAVGLLVGLG
                     VALGGRVEHHFVAATAPGTIAPGDFIAGIAAGLFAFGGWHMVTYSAEETVSPRTTIPR
                     ALTLGTIIVTATYLALNAVYLYVMPLDQVAGSTRVAADLADTLLGPGGGGAVSGLVLF
                     SSFGALAGIVLTGPRVYLAMARDGLLFRWVGEVHPRFRTPHRALVLQAVWASVLVATG
                     TFRALFTRVIYTEWIFFGLLAVGLVLLRRRAGLTRGYSVWGYPVLPMLFAGAAFAVVV
                     NEVVADPRETLTGLGLVLAGLPVYYRWARKGLQPKDAR"
     gene            complement(5990..7900)
                     /locus_tag="VGA78_05985"
     CDS             complement(5990..7900)
                     /locus_tag="VGA78_05985"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX9893451.1"
                     /translation="MSEPSDQELGLNAAITRRDFLNATLLGTGSSLLQLPAPLARVQQ
                     DGEAAAFDGFGGTGDYALSNGNTWDVVQAGHALRDGRFDRRPSAVRETGETYDLLVVG
                     GGFSGAGAAYAFHKRRTGTVLILDNHRMWGGEAKRNEFMVDGVRLIGPQGSNDFGIPG
                     ASRPAELERWKDLGLPTNPDDYQHQEWASGITPLTISRDHYYQLFWDEFDSNGYFFDQ
                     GGGRPPRLVRDPFRHLEATPWSEKVRQDFVRARTGMDRPSALTDRSEIERWLDTMSYE
                     TYLTGVLGLDPAIPRYLDPLVASGFGVGCDLLSAVTPSRFALLPGFNWIYGKAPDRRY
                     VWRGPASFPGGNDGLYRHFIKWLVPDAIAGGRTFDEIQLGPVRRDALDRKGQPTRIRL
                     GATAVRVEHRRGDLVSVTYLKNGTLHQVTARGVVMANGGWSAQRAVRDLPQGHHEAYR
                     SFVRAPMLVVNVALRQWRFMYDQGITAAWYFSGPGFACNLRQTMVMGDYRPPLHPDQP
                     TLLTFYIPFPRPGLSQTDQLVSARTELLGTSYRDYERVIRGHLTRLFGQFGFEARRDI
                     AGIVLNRWGHAYVCPAPGFYYGRDGKPAARDVIRQPAGRIGFANAELAGHQTYAAALS
                     EGARAVEQLFPA"
     gene            8077..8346
                     /locus_tag="VGA78_05990"
     CDS             8077..8346
                     /locus_tag="VGA78_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893452.1"
                     /translation="MTREAKLLAEYAHLYPGVPAGVWMPAADLGAALLLAHLQLSVLP
                     RLGNRLLDEQHFEFRGGGIRGPESDERTRSGEEGERASPPARLDR"
     gene            8412..9287
                     /locus_tag="VGA78_05995"
     CDS             8412..9287
                     /locus_tag="VGA78_05995"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX9893453.1"
                     /translation="MAAYSPPADAPPGPKPRDEDLDFFGLTHPGRVRKENQDHFLYCT
                     LHKTMRVWGTSLPNPELLELPSQRLASFGLVADGVGGRAGGETASRAALEAIATYVTH
                     TMQAFYTGDSRNQDLFLTQLTDGARRTHDAVVARARESGEPQGPATTLTAMIAIWPNL
                     FVLHVGDSRCYRFRDGVIQQLTRDQTMAQDLVDSGVLPADRARKSPFAHVLSSSLGGQ
                     TTEPVVTKSDLRLGDVIVMCTDGLTKHVSDERIAERLRTLQTSEQACRDLVEEALEAG
                     GSDNVTVLVLRAIVR"
     gene            9390..11618
                     /locus_tag="VGA78_06000"
     CDS             9390..11618
                     /locus_tag="VGA78_06000"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9893454.1"
                     /translation="MYTIRLLPVLLAGVSGSALAQADGIGRTTPSAAHPVAASGRAEI
                     PPKVDGRLDDAVWGRAAPLGGFTQRDPREGHPVTERTEVRILSDGEAIYVAAWLYDRD
                     QSGIVPGERLRDAELSNSDYFGIILDTYLDRQNGFIFSTTPSGIEYDGQVVKEGEGGG
                     VFQSGQSRAQSGSMGGFNLNWDGSWTVATSIDSAGWYAEFRIPFSTLRYGAGASQRWG
                     LNLVRGIRRRNEEAFWAPIPRQFNLMRLSLAGTLEGLQVPSRRAATVTPYLLGAARRD
                     FSQRETEWPREAGADAKLGLTPSLTLDLTYNTDFAQVEVDEQRTNLTRFPLFFPEKRP
                     FFLENAGIFATGTPQAADLFFSRRVGIGAEGQPVPLLGGGRLTGKVAGLTVGVLQIFT
                     DDLDSVTGNSYSVARVTREIGGRSRVGALLVQRVSTGDGDDYNRTYALDGRLGLGTAW
                     TVDWWGAATETPGRDGRETAWSVRIGQQTGQWTNSVRVLQVGEDFNPEVGFLPRSGYR
                     FFEGSILRTVRTPGISWMRQWIPHFTYRGYYGFDGAHQSSYYHIDPEFDFQRGGRLGP
                     ELNIQGETLTEPFEIAEGVVLGPGRYTWAFNGWDFSTNPSAPVSFLMRLDLGGFYTGS
                     RYGGSATVTFRPGASFTSSLLAEHNDVHLDQGDFTRSLLGLRLGYFFTPRIFLQSLLQ
                     YNNQARIWTANARFGWLNTAGTGLFVVFNEAQEAEGLTSWVRPQLRSFTVKFTRQFGT
                     GG"
     gene            complement(11661..>11938)
                     /locus_tag="VGA78_06005"
     CDS             complement(11661..>11938)
                     /locus_tag="VGA78_06005"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HEX9893455.1"
                     /translation="YIAYVLIRHVPDLLATGCFVGAEFAQAGEHKFRQRYLAFSREDL
                     DRYLAEHAVRLREDFARHFPGGTALTREVWDVIKYWGNFTRASASAG"
BASE COUNT         1964 a         3946 c         4083 g         1945 t
ORIGIN      
        1 gacggcttga gcccagcgtc cttcagggcc tgctccatcg gcgggatggt gcgccggacc
       61 agatcgtcca ccaactgctc gaacttggcg cgggtgaggg tgaggttcag gtgcttgggc
      121 cccgactggt ccgccgtgat gaacggcaaa ttgatgtcgg tcgactgggt gctcgacaac
      181 tccattttgg ccttctcggc ggcctccttg agtcgctgga gcgccatcgg gtccttggac
      241 agatcgatgc cctgatcctt cttgaactcg ccgaccagcc agtcgatcaa ccgctggtcg
      301 aagtcgtcgc cgcccaggtg ggtgtcaccg ttggtgctct tgacttcgaa gacgccctcg
      361 gccagctcca ggatggagat gtcgtaggtt ccgccgccca ggtcgaacac cgcgatcttc
      421 tcttccttct tcttctccag tccataggcc aaggctgccg cggtgggctc gttgatgatc
      481 cggagcacct cgaggccggc gatcttgccg gcgtccttgg tggcctggcg ctgggcgtcg
      541 ttgaagtacg ccggcaccgt gatcacggca cgctccaccg agtgccccag gtagtcctcc
      601 gcggtctgct tcatcttctg cagcaccatc gcggagattt cgggcggagt gtaggtcttc
      661 cccgcgatct ccaccgcggc cagtccgttc ggacccggct tgatcgggta ggggacccgc
      721 cgggcctcct cctgaacctc gtccatccgg cggcccatga aacgcttgat cgagaagacg
      781 gtctggcggg ggttggtcac cgcctgacgc ttggccacct gacccacaag gcgctcgcca
      841 tccttggtga acgccaccac tgacggagta gtgcggcccc cctcggcgtt ggggatcacc
      901 accggatcgc ccccctccat gaccgcaaca acggagttgg tggtcccgag gtcaattccg
      961 atgattttcg atgccatgtg tccctctcca tcgccatttg taaaaggtcg gcaagctccc
     1021 aagagtggag gagcaaccgg tataccctga ttttctgccg ttttggcagc taaatggcag
     1081 gggttggctg tgttgtggcg gcgtttcgcc gcggggactg cccagcgaca gtgggcgggg
     1141 gcttagttca gccgtgacgc atcagggcag ggcacctagt cgacgcagag cgtcgcgaga
     1201 ggatcccagg ccgggattga gcgtcagggc tcgtcgaaag gacccgatgg cttcgtcgcg
     1261 cctcccggcc cgttccagcg cttcacccag gctgtcgtgg acattagccg aggcggcgaa
     1321 caaggtggcg ttgacccgga agacggtcac agcggcctcg acctggccgg ttccgaggag
     1381 gtcgtatccg gctcggttga cgtcgtcctc cacgtcccgg aaccggttct ccgggtgggc
     1441 ccgatagacc gccatcagac gctggacggc cgccgtgtcc ccccgagccg cgtcggggga
     1501 gagtcgctgg gccagcgtgg gtccggtggc ccagcggagg gcggccgcaa gcaatggatc
     1561 gcgccgggcc cggtagtcgg cggctgtcat ttccacgaag acgtcgggcg tgaacgccgg
     1621 ccgggcgtcc gccgccacgt ggccttgcca gtacagggat gacacgaaca cgcggagacg
     1681 gctgcgcggg agctcgagtc ggcgggcgtc cccgtattgg ttgggcgcat tgccggtcgg
     1741 ctcccccacg aacgtggcgc tggtgtagta gtcgagctca ttcaccagat tctgcgccgc
     1801 cgagaacgtg gcgcgaccta tcagaaccat caggcggtcc gtgcgatcga gggccgggcg
     1861 gcggatgagc tcgcggacca gaaaccggtt gagaaagttg ttgccgccgc cgttggcgcg
     1921 gatgtcgagc accacgcgtt cgaccgccgc ggaatccccg gcggcgaagg cgcggcggaa
     1981 gaactgttca ttggtctcgc cggcggcgaa gaactggacc tcccgatagc cgatatagag
     2041 tgtgcgatcc gggagaatgg tgaaccagaa cggagcctcc ggccgttcca gccagagggg
     2101 atcctttccc ggcgtcgcct ggcgcatgtc gacccatccc gccggttcct ggcggccggg
     2161 cggacccggt gccgcggccg ggcccgccgc ctcgagcgtc acggtccgct gctgcccgtt
     2221 ccgctcgacc accagggtgg tacgggctgg atcgtcgctc agacccagac ctgccaccac
     2281 ttccggcatg gccaggaatg ccgcgccgcg gaaccgggcc catccggggc tctcgtgcga
     2341 tacgatggcg gtgaccgcgg ccagggcgtc cggcgcggtg gcgcgcccga ggctcaccac
     2401 ccgtgcccca gccaggtcgg cgtgccggcc gtcggccgcg atgatgtaga ggccgtcggc
     2461 gaagtcgtag agacggatgg gcagctggtg gaacccgatt cggtcttcga aatccggcgc
     2521 caggaaagtg tgaccgtcct tcaccagtgc caccaggcgc atcagctcca cgatgacttc
     2581 gtggcggcgg agccggggca gcctgctgtc caggacccct accgccgaat cccactgggc
     2641 ccgggtcaga tgcgcaaagg cattcttgtg gcgcttgggc agctcggtcg caagcacctg
     2701 aaggtcttcc tgccaggcgg cgagctcgcc tggagcgagc ggcgctggtt gctgcgcggc
     2761 cagagtggtt gcggcgaagc acagagcggt ccaggtgccg gccacctttc actccttgaa
     2821 cggcgatttc accttgcggg tcgaccccgg gtcgctcccg tccagcagct gttgcagctc
     2881 ctcgatgctc agctcgaacg ggtctttctc gtagcccggg gagcgggtca tgcgggggcg
     2941 gtgcgggttg tcacctacgg gatcgagctc ccactcgtcc cgggatcggg cccgcacctc
     3001 ccattgatgg ccgtcgcgat ccacgaaccg gcgatacccc atgcggccta gttcccgcgg
     3061 ctccagggcg gcaccacgtt gttgctccgg gcgtacgcga tcagctggcc cagatgctcg
     3121 tggacgtggg tcgtggccag gacccacatc tgttgcttgg tatagctctg accgaacgcg
     3181 ttgatcttct cgcccagcgc cgaggccggc gtgtccatca tggtcttccg caggtgggcg
     3241 aaagacgcct ccagttccgc gatcgcggcg gcccggtcga ttttgcgggt ctcataggcc
     3301 tgcaccgtct tatagtcctc ggccttgatg ccggtcgtgg ccgggggcgc cgcgccgaag
     3361 acggccggga tcaggtagtt gtcagccgcc aggtgctgaa ccacttcacc ggtcgagcgg
     3421 accccggcgc ccgggcgcca ggtccagccc gactccggca tcgctttcgc caaccccacg
     3481 atcttgtctt gcgcctcttt caggtcggtc agcaggtcgg ccatcacgcc ggttggctgc
     3541 tgagcggccg ccggcacggc ggccagggcg aggcaggcgg ctccggtagc cgccgcgcga
     3601 atcagtgaac ccatgggaac gcactccaga tctcgggatg accgcaaaac tggccgggaa
     3661 accaatcggg cgctagagcg ccagcagccg ggcggcgttg ccccccagga ttctggcgcg
     3721 gtgttcttcg ggcagcgaca ggccggtaat gctctgccgc atccgcttga tgctgccgat
     3781 ctggtgcggg tagtcgcttc cggccaggat ctgatccgcg ccggcgaact cgaccgccag
     3841 ctgcaacgcc cccgggtcga aattgacggt gtcgtagtag aaccgtttga gataggtgct
     3901 gggtggctcc gggatgttca cccggcattc ggcaaaggca cggtagccgc ggtctaggcg
     3961 ttccgccaga taggggatgg tgccacccag atgtcccagc acccagcgga ttccggggaa
     4021 ccgctcgggt accccgctga agaccaggtg cgtcgcggcg agggtagtgt cgaacaggaa
     4081 tccgaccagc ggcatgagcc agtactcctg catcgcttcc acgccgagag ggaatgtggg
     4141 atggatgtag aggatcgcgc cggcgtcgct ggcccgttgg tagagaggcc agaagcgctc
     4201 gtcggccagc ggtatgccgt tcacgttgcc gaacaccata catcccttga accccagccg
     4261 atgcacccgc tcgaactcct gtactgccgc cggaggatcg ttgaggggaa gggttgccag
     4321 cgcggtgaag cgctgccctc gctcggccat caccacggcg aaggcgtcgt tgaccagccg
     4381 ggccagctgg gccgatcggg ccggggtctc gagcagggta ccggggcagg tgagcgagat
     4441 gacctgatgg tccaccttct cccggtccag gacctcctcg cggtaggcga ggtcgcgatg
     4501 acctcgaacg gcaatgttcg cgtcgcccgg cgagtagagc accggattgc cctcggcgtc
     4561 atcatgcacg ctgagcgcgc tctctccctg acggagggcc tcgatgaaca ccgggggata
     4621 atagtgattg tgcacgtcga tgacggtcat cgcgcgtcct tcggttggag gcccttccga
     4681 gcccaccggt agtacaccgg caacccggcc aggaccaggc ccagcccggt gagcgtctcg
     4741 cgcggatcgg ccacgacttc gttcaccaca acggcgaacg ccgccccggc gaagagcatg
     4801 ggaagcactg gatagcccca gaccgagtag ccgcgggtga ggccggcgcg gcgccgcagc
     4861 aacaccagcc cgacggccag caggccgaag aaaatccact cggtgtaaat gactcgggtg
     4921 aacagggccc ggaaagtgcc ggtagcgacc aggaccgaag cccagaccgc ctgaagcacc
     4981 agcgcccggt gcggggtccg gaacctggga tgcacttcgc cgacccagcg gaacagcagg
     5041 ccgtcacgag ccatggcgag gtagacgcgc gggccggtca acacgatgcc ggccagggct
     5101 ccgaaggagg agaagagcac caggccagag accgccccgc ctccgccggg tccgaggagc
     5161 gtgtcggcca ggtccgccgc cacccgggta gacccggcga cctgatccag cggcatgacg
     5221 tagaggtaca ccgcgttcaa cgccaggtac gtggcggtga cgatgatggt gccgagggtg
     5281 agggcgcggg gaatggtggt gcggggggag acggtttcct ccgcgctgta ggtcaccatg
     5341 tgccaaccgc cgaaggcaaa caatcccgcg gcgatgccgg caatgaaatc gccgggcgcg
     5401 atcgtgccgg gcgcggtcgc cgcgacgaag tggtgctcga cccgtccacc cagagccaca
     5461 ccgagcccga caaggagtcc caccgcgacc agcttgccgg cggtaaaccc ggtttgaagc
     5521 cggctgccct gtctcacacc cacgtagttc accgccgaaa gcagcaggat caccccgatg
     5581 gccactgcct tgctcgccac cgggcccata ggcaccaggt atccggcgta ccgggagaac
     5641 accaccgcga tggccgcaat gatcccggag tgcatgctcc agaacatcgc ccagccccac
     5701 agaaaccccg ttgaggggcc gtaggcctcg ctgaggtaga cgtacacgcc tccggtccgg
     5761 gtgaaggtgc tggccaattc ggcgcacacc agcgccccgc agagcgtgat cgctccggcc
     5821 accagccaca ccgcgaggat gcccgtcaca ctcggaaccc gggcggtgat ttcggaaggc
     5881 tgcacgaaga tcgacgcgcc gatgatggtg cccaccacca gcgcggtggc gtggggcatc
     5941 ccaatggcgc gttgcagcgg gggcggcggc cgcgacggtg gctctgaact cacgctggaa
     6001 acagttgctc gacggcacgg gctccctcgc tcaacgcagc ggcataggtc tggtgccccg
     6061 ccagctccgc gttggcgaac ccgattcggc cggccggctg ccggatcacg tcccgagcgg
     6121 cgggtttgcc gtcgcgtccg taatagaacc ccggggccgg gcagacgtag gcgtggcccc
     6181 agcggttgag cacgatcccg gcgatgtccc gccgggcctc gaagccgaat tgtccgaaga
     6241 gacgcgtgag gtgaccgcgg atgacgcgct cgtagtcccg atagctggtg cccaggagct
     6301 cggtacgagc ggagaccagc tggtcggtct ggctcaggcc cggtcgggga aaggggatgt
     6361 agaacgtgag gagagtcggc tggtcgggat gcagcggcgg gcggtagtcg cccatcacca
     6421 tcgtttggcg caggttgcag gcgaacccgg ggccgctgaa gtaccaggcg gcggtgatgc
     6481 cctggtcgta catgaatcgc cactgccgca gcgccacgtt cactaccagc atcggcgccc
     6541 gcacgaagct gcgataggcc tcgtggtgtc cctggggaag gtcccgtacg gcgcgctggg
     6601 ccgaccagcc cccgttggcc atgaccacgc cccgggccgt gacctgatgg agcgtcccgt
     6661 tcttgagata cgtcaccgag accaggtcac cgcgccggtg ttccaccctc actgccgtgg
     6721 caccgagacg gatccgggtc ggctggccct tccgatccaa cgcgtcgcgc cggaccggtc
     6781 ccagttgaat ctcgtcgaag gtccggccgc cggcgatggc gtccgggacc agccatttga
     6841 tgaaatggcg gtagagcccg tcgttcccgc cggggaatga agccggcccg cgccagacgt
     6901 atctccggtc gggggccttt ccgtagatcc aattgaatcc gggcagcagg gcaaagcggg
     6961 acggcgtcac cgccgacagc aggtcacaac cgaccccgaa accggacgcc accagcgggt
     7021 cgaggtagcg cgggatcgcg ggatcgaggc ccaggacccc ggtcaggtag gtctcatagc
     7081 tcatggtatc gagccaccgc tcgatctcgc tgcgatcggt gagcgctgat ggccggtcca
     7141 tcccggtccg cgcccggacg aagtcctgcc gcaccttctc gctccaggga gttgcctcca
     7201 ggtgccggaa cggatccctg accagccggg gtggccggcc accgccctgg tcgaagaagt
     7261 acccgttgct gtcgaactcg tcccagaaga gctggtagta gtggtcccgc gagatggtga
     7321 gcggcgtgat ccccgaagcc cattcctggt gctgatagtc gtccggattg gtgggtaggc
     7381 cgagatcctt ccaccgctcc agctcggccg gacggctggc ccccgggatg ccgaagtcgt
     7441 tcgacccctg gggaccgatc aaccggactc cgtcgaccat gaactcgttg cgcttggctt
     7501 cgccacccca catccggtga ttgtccagga tcagcaccgt cccggtgcgg cgcttgtgaa
     7561 aggcatatgc agcgcccgcg cccgagaacc cgccgccgac caccagcagg tcgtaggtct
     7621 cgccggtctc ccggacagcg ctggggcgcc gatcgaaacg gccgtcgcgg agggcgtggc
     7681 cagcctgtac cacatcccag gtattgccgt tggacagggc gtagtcgccg gtgccgccga
     7741 acccatcgaa ggcggcggcc tcaccgtcct gctgcacgcg cgccaaagga gcgggcagct
     7801 ggagcaggga gctgccggtt cccagcagcg tcgcgttgag aaaatcacgg cgggtgatgg
     7861 ccgcgttgag gccgagctcc tgatcgctgg gttcgctcac gggtggtatc gccttccgtt
     7921 gtggtgcggg gatcctccgt aggatcgagt cgcgactcca ccggcgcaag gacggcgagg
     7981 tctggcctcc cggggctttg cgccgtaggt tcgcggcagt cccgtacccg gtgctcggtc
     8041 agatccacgg ctggaggtcg caagatgaag gcaggcatga cgcgcgaagc caaactcctc
     8101 gccgagtacg cgcacctgta tccgggtgtg ccggcggggg tgtggatgcc ggcggccgac
     8161 ctgggcgcgg ctctgctctt ggcgcacctg caactgtcgg tgctgccgcg cctgggcaac
     8221 cggctcctgg acgagcagca tttcgagttc cgggggggcg gcattcgagg gccggagagc
     8281 gacgagcgca cccggtccgg tgaggaagga gagcgcgcct ccccgccggc gcggttggac
     8341 cggtgacggt caaggggccg gccggggctt gggcttgttg cgccgttaca gagccgtagt
     8401 aacttcgcgg tatggccgca tactcaccgc cggccgacgc tcctccgggc ccgaagcccc
     8461 gggacgagga cctcgacttc ttcggcttga cccacccggg ccgggtccgc aaggaaaacc
     8521 aggaccactt cctctactgc acgcttcaca agaccatgcg ggtctgggga accagcctgc
     8581 ccaatccgga actgctggag ctgcccagcc agcggctggc ttcattcggc ctggtcgccg
     8641 acggggtcgg cggcagggca ggcggcgaaa ccgccagccg ggccgcactc gaagccatcg
     8701 ccacctacgt cacccacacc atgcaggcgt tctacaccgg cgattcgcgc aaccaggatc
     8761 tgttcctgac ccagctcact gacggagcgc gccggactca tgatgcggtg gtggcgcggg
     8821 ctcgggaaag cggggaaccg caggggccgg ccaccaccct gaccgcgatg atcgccatct
     8881 ggcccaatct cttcgttctg catgtgggcg acagccggtg ctaccgcttc cgggacgggg
     8941 tgatacagca gctgacgcgg gatcagacca tggcgcagga cctggtcgat tccggagtcc
     9001 ttcccgcgga tcgagcccgc aagagtcctt tcgcccatgt gttgtccagc tctctcgggg
     9061 ggcagaccac cgagccggtg gtgaccaaga gcgatctgcg gctgggcgac gtcatcgtga
     9121 tgtgcaccga tgggttgacc aagcacgtgt ccgatgagcg gatcgccgag cggctgcgaa
     9181 ccctgcagac ctcggaacag gcctgccgcg acctggtgga ggaggcgctc gaggccgggg
     9241 gcagcgacaa tgtgaccgtg ctggtgctgc gcgcgatcgt gcggtaacgg tcgaaggggt
     9301 cgaaggggtc gaaggggtcg aagagggtcg aagagggtcg aagagggttc tggtgtttcc
     9361 gcggttgcgg tactattctc gcttgctcca tgtatacaat tcgtctgcta ccggtgctcc
     9421 ttgcgggagt cagtggctcg gccctggcgc aggccgatgg gatcggccgg actacaccct
     9481 cggcggccca tccggtggcg gccagcgggc gggccgagat cccgccgaag gtcgatggcc
     9541 ggctcgacga tgcggtatgg ggccgggcgg cccctctggg tggtttcacc cagcgcgatc
     9601 cgcgcgaagg ccacccggtg accgagcgca ccgaagtacg gatcctgagc gacggcgagg
     9661 ccatctatgt cgccgcctgg ctctatgacc gtgaccagag cggcatcgtc ccaggagagc
     9721 gactgcgcga tgctgagttg agcaacagcg attacttcgg gatcatcctc gatacctatc
     9781 tcgaccgtca gaacggcttc atcttctcga ccactccgtc cggcatcgag tacgacggcc
     9841 aggtggtgaa ggaaggtgag gggggcgggg tgtttcagtc gggccagagc cgggcccaat
     9901 cgggctcgat gggcggcttc aacctcaatt gggatggcag ctggacggtg gcgacctcca
     9961 tcgacagcgc cggctggtac gccgaattcc ggattccttt ctcgaccctg cgctatggcg
    10021 ccggggcgtc gcagcggtgg gggctcaatc tggtgcgagg catccggcgc cggaacgaag
    10081 aggcgttctg ggcccccatc ccccgccagt tcaatctgat gcggctgtcc ctcgccggca
    10141 cgcttgaggg actgcaggtg cccagccgcc gggcggccac ggtaaccccg tacctgttag
    10201 gcgcggcccg gcgggacttc agccagcgcg agaccgaatg gccccgtgaa gccggggccg
    10261 atgccaagct gggcctcacg cccagcctga ccctggatct cacctacaac accgactttg
    10321 cccaggtcga agtcgacgaa cagcgcacca acctgacccg cttcccgctg ttcttcccgg
    10381 aaaagcggcc cttcttcctc gagaatgccg ggatcttcgc gaccggcacg ccccaggcgg
    10441 ccgatctgtt cttcagccgc cgggtcggaa tcggcgccga gggccagccg gtgccgctcc
    10501 tcggcggggg gcggctcacc ggcaaagtcg ccgggctcac cgtcggcgta ttgcagatct
    10561 tcaccgacga tctcgattcg gtgacgggga acagctactc ggtggcccgc gtcacccgcg
    10621 agatcggggg ccggtcgcgg gtcggcgccc tgctggtgca gcgcgtttcc accggcgacg
    10681 gcgacgacta caatcggacc tacgccctgg acggccggct ggggctggga accgcctgga
    10741 ccgtcgactg gtggggcgcg gccaccgaga ctccgggacg cgacggccgg gaaaccgcgt
    10801 ggagcgtccg gatcggacag cagaccggcc aatggaccaa cagcgtccgg gtgctgcaag
    10861 tgggcgagga cttcaacccc gaggtgggct tcctgccccg cagcggttac cgcttcttcg
    10921 aaggctcgat cctgcggacc gtccggactc ccggcatctc ctggatgcgg cagtggattc
    10981 cccatttcac ctaccgggga tactacgggt tcgacggggc gcatcagagc agctattacc
    11041 acatcgatcc ggagttcgat ttccagaggg gcggccggct ggggcccgag ctcaacattc
    11101 agggcgaaac cctgaccgag ccgttcgaga tcgccgaggg ggtggtgctg ggtccggggc
    11161 ggtacacctg ggcgttcaac ggctgggatt tctcgaccaa ccccagcgcg ccggtatcct
    11221 tcctcatgcg gctggacctg ggcgggttct acaccggaag ccgctacggg ggcagcgcga
    11281 cggtcacgtt ccggccgggc gcctcgttta ccagctcgtt gctggcggag cacaacgacg
    11341 tgcacctgga ccagggtgac ttcacccgca gcctgctggg actccggtta ggctatttct
    11401 tcacccccag gatctttctc cagtccctgc tgcagtacaa caaccaggcg cggatctgga
    11461 ccgccaacgc gcgcttcggc tggctgaaca ccgccggcac cgggttgttc gtggtcttca
    11521 acgaagcgca ggaagccgaa gggctgacca gctgggtccg ccctcagctc cgctccttca
    11581 cggtcaaatt cacccgacag ttcggaaccg gcggctgacg tcgcccggtc cggcgcctcc
    11641 gcgacggatc ctcaggggcc ttaccccgct gacgcggacg cccgggtgaa gttgccccag
    11701 tacttgatca cgtcccagac ttcacgggtc aaggcggtgc cgccggggaa atgtcgggca
    11761 aagtcctccc ggagtcgcac cgcgtgctcg gccaggtagc ggtcgagatc ctcgcgggaa
    11821 aacgccaggt accgctgccg gaacttgtgc tccccggcct gggcgaactc ggccccgacg
    11881 aagcagcccg tggccagcag atccggaacg tggcggatca ggacataggc gatgtact
//
LOCUS       DASWKS010000202         6348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2326470, whole genome shotgun sequence.
ACCESSION   DASWKS010000202 DASWKS010000000
VERSION     DASWKS010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6348
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2326470"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VGA78_06010"
     CDS             <1..485
                     /locus_tag="VGA78_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893456.1"
                     /translation="LGKWGLIFGIAGTLTGGLLADWLQRRFVWARVVVSSIGFLLGGP
                     LAIWLLTIRDLSLFIPVFCGAFFFLTWYNGPLTSVIFDVTPQRISTTVAGAYLLFIHL
                     AGDAVALPLVGFLSDEFGIGRAVLILPVMALLGSIVALGAARTVRADMLKVALAAPPR
                     "
     gene            495..1244
                     /locus_tag="VGA78_06015"
     CDS             495..1244
                     /locus_tag="VGA78_06015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893457.1"
                     /translation="MAAIIAVYLGGIAVLLGAVLLFVRWRIALPLLAAGLAAGSVGLI
                     LPAPERNSPSARTRLDDLVPRYQFHERHQVATVASCARAYQALLNVTAGEITFFRTLT
                     WIRRLGRPGAESILNPPADAPLLKVATRSGFMLLANQEDREIVLGTVVLMPPGGRRPE
                     NPDQFTTLSEPGYGKAALNFHWEPTGTGGCIVTTETRVFATDPEARRTFGKYWRVIYP
                     GSALIRRMWLRAVKRRAERGEVLAPSAANGH"
     gene            1330..2325
                     /locus_tag="VGA78_06020"
     CDS             1330..2325
                     /locus_tag="VGA78_06020"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HEX9893458.1"
                     /translation="MRWLGAVQAQDYLGSLWALGLRLPGTTQLQVEQALADGAIIRTW
                     PLRGTIHFVAPQDVRWMLELVTPRLLATHGRRLERESGLDPIVLKRSRNAFTRGLRGG
                     KQLARPVMYQLLEAAGVSTAGQRGYHILWRLAQEGLICFGPRAGKQPTFVLLDEWVPP
                     SKKLERDAALAELAGRYFTSHGPATVPDFAWWSGLTAADATAGLEAVKRDLTRETIDG
                     RVYWMPPGTERPRVTGTTAHLLPAYDEYTVAYRDRRAVLTAVPAARPLARNGILSPVI
                     VIDGQVVGTWRRSLSKQNVVIALAPFARLKPGAKPALVRSANRYGGFLQVPAILK"
     gene            2333..2872
                     /locus_tag="VGA78_06025"
     CDS             2333..2872
                     /locus_tag="VGA78_06025"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEX9893459.1"
                     /translation="MSRLVAFLRGINVGGHIVKMDELRRHFTAVGCKDVETFIASGNV
                     IFATPSRGAEALQQRIEDRLRRALGYEVPTFLRTELEVAGIAGHRPFDAAQLESAVSL
                     NVGFLAEPVRPVGRKRLMALRTEVDDFRVNGREVYWLSRRKISESTVSYAALEKALET
                     SATFRGLRTVERIAARLAE"
     gene            complement(2877..3221)
                     /locus_tag="VGA78_06030"
     CDS             complement(2877..3221)
                     /locus_tag="VGA78_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEX9893460.1"
                     /translation="MDETSETASCGCAAQETAGRHPVAVDPEIKRTVLNRLRRIEGQV
                     RGLQRMVEEERYCAEVITQISSVQEALRSTARSVLQNHLRHCATAAFQSGDSGRAEAM
                     YTELLDLMSKAR"
     gene            complement(3214..3441)
                     /locus_tag="VGA78_06035"
     CDS             complement(3214..3441)
                     /locus_tag="VGA78_06035"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEX9893461.1"
                     /translation="MPTRPLTLNISGMSCSHCVNAVNQALGRLQGVSIESVRIGRADL
                     RFDEAVVKPEQITAAVEDAGYGVRVAEPTDG"
     gene            3616..5127
                     /locus_tag="VGA78_06040"
     CDS             3616..5127
                     /locus_tag="VGA78_06040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893462.1"
                     /translation="MTAIRLPFGSGPVAGLLVPVLLNQDGPPDTVGVAAWHLALSNLI
                     GQEVPHDLLALWLFPARGGVMLLAPVELGRDRVEITSPDPFLSQHQIFELEERVRHAG
                     YQSVVAVPIRSGTRDLGLAIFAHLEPGRYDPDQVMRLLTMMRQLVPAFALLAESPPLA
                     LTAGAAVDLTRQNAAEAVARAAAEGRTGSEVLRLVSGVLQSLVPHDRIEVAVPGIGSG
                     TWALLSGTPEGRRWGDSTPQVSQCVSALVARAGEDGCIIVGDLRELGVGWPAYRETRA
                     LQRVHAVMGVPLTVAGGDEAWLLLGGAAPHLYREPDRELLRAVAPVIALRVHGLRMAL
                     DVGVARAQSSAQQAGQSRAARLASALAGTPHWGDAVGLFVQDVRESLGYRDVRFALRL
                     GEGTYVEVSAGDLRPLASLAVQPLAQSALESVFSGSAPFLVQGEQGNDLVVPLRVAGR
                     VVGALELRDGSPGSGGHPVTGAQLFADLIAPHLELIRRSALGGRPDLTTTFNR"
     gene            complement(5308..6129)
                     /locus_tag="VGA78_06045"
     CDS             complement(5308..6129)
                     /locus_tag="VGA78_06045"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX9893463.1"
                     /translation="MLDAVLLFRDALYATLVIAVTCGVLGVWVVLRRIVFVGAALAQL
                     SSAGIALALLLAGAGLISGPLAQPLLFALVVSLLGAVAFGLGTRRGLIPPDATIGVTY
                     AVAGAVGVLLIAKAAAGEAHDLYLHGNILGLTRRDTLLELGVSIPVLLTHGLFYKEFL
                     FVSFDPETARAVGYRVDRWNLLLYFTIGLVIAFAIQSAGVLLVFNFLVLPAVTGLLVA
                     RNMGGIFAVAIVAAALAVGFGFVMSIPFDLPTGSAIIAASGLLVLLAWAARALRP"
     gene            complement(6122..>6348)
                     /locus_tag="VGA78_06050"
     CDS             complement(6122..>6348)
                     /locus_tag="VGA78_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893464.1"
                     /translation="LTVLMVSHALNEVANYVERIALLVEGGLRIGPVGEVLTEASLTD
                     LYGIPVEVASFAGHRIVLARHRERNGRPGA"
BASE COUNT         1013 a         2082 c         2172 g         1081 t
ORIGIN      
        1 tgttgggcaa gtggggactg atcttcggga tcgccggcac gctgaccggg ggtctgctgg
       61 ccgactggct gcagcggcgc tttgtgtggg cgcgggtggt ggtgtcttcc atcggattcc
      121 tgctgggcgg ccctctcgcc atctggctgc tcacgatccg tgatctgtcc ttgttcatcc
      181 cggttttctg cggtgcgttc ttctttctga cctggtacaa cggcccgctc acgtcggtga
      241 tcttcgacgt caccccgcag cggatcagca ccacggtggc cggggcgtac ctgctgttca
      301 ttcatctcgc gggcgatgcc gtggcgctcc cgctggtggg attcctttcc gacgagttcg
      361 ggatcggccg ggcggtgctg atccttccgg tgatggcgct gctgggttcg atcgtggccc
      421 tgggcgcggc gcggaccgtc cgggccgaca tgctgaaggt cgccctggca gctcccccac
      481 gttagcgcga agccatggcg gcgatcatcg cggtgtacct cggcgggata gctgtcttgc
      541 tcggcgcggt gctgctgttc gttcgttggc gaatcgccct gcctttgctg gcggccggtc
      601 tggccgccgg atcggtcggc ctgatcctgc cggcgccgga acggaacagc ccttccgccc
      661 gcacccggct cgacgacctc gtccccagat atcagttcca cgaacggcac caggtcgcga
      721 cggtcgcgtc ctgcgcccgg gcctaccagg cgcttctgaa cgtgacggcg ggcgagatca
      781 ccttcttccg gacgctgacc tggatccgcc gcctgggacg gcccggggcc gagagcattc
      841 tgaatccacc cgccgacgca cccctgctga aggtggcgac ccggagcggc ttcatgctgt
      901 tggccaatca ggaggaccgg gagatagtcc tcggcacagt ggtcctgatg ccgccgggtg
      961 gacgccggcc cgagaatccc gaccagttca ctaccctcag tgagcccggt tacggcaagg
     1021 ccgcgctcaa cttccactgg gagccaaccg gcaccggagg ttgcatcgtg acaaccgaga
     1081 cccgggtatt cgccaccgac cccgaggccc ggcgtacctt cggcaagtat tggcgggtga
     1141 tctatcctgg gagcgcgctg atccggcgaa tgtggcttcg cgccgtcaag cgtcgcgcgg
     1201 agcgtggcga ggtgctggct ccatcggcgg ccaatgggca ttagacagca ggctgtccga
     1261 gacattcccc gtcagcggct ccagagccag ggcctcgccg gacctggcca cgagagcccg
     1321 gcggacttgg tgcgttggct gggcgcggtg caggcccagg attaccttgg ctcgctctgg
     1381 gcccttgggc tccggctgcc gggaaccacc cagctccagg tcgaacaggc actggccgac
     1441 ggagccatca tccgcacctg gcccctccgg ggaaccatcc atttcgtggc gccccaggat
     1501 gtgcgctgga tgctcgaact ggtgacaccg cggctgctcg cgacccatgg ccgccggctg
     1561 gagcgcgagt ccggtctcga ccccatagtg ctcaaacgca gccggaacgc attcacccgt
     1621 gggctgcgag gcgggaagca gcttgcgcga cccgtgatgt accagcttct cgaggcggct
     1681 ggcgtttcga ccgcggggca gcggggttat cacatcctct ggcgattggc ccaggaaggg
     1741 ctcatctgct tcggcccccg ggcgggcaag cagcccacgt tcgtcttgct ggacgaatgg
     1801 gttcccccca gcaagaagtt ggagcgggac gcggcgctgg cggagctggc cgggcgctat
     1861 ttcaccagcc atggccctgc cacggtgccg gatttcgcct ggtggtcggg cctcacggcg
     1921 gcggacgcga cggccggcct ggaggctgtc aagcgcgatc tcacgcggga gacaatcgac
     1981 ggcagggtct actggatgcc cccgggcacc gaacgacccc gagttaccgg taccaccgcg
     2041 cacttgttgc ccgcctatga cgaatacacc gtcgcctatc gcgatcgcag ggccgtgctc
     2101 accgcggtcc ctgctgcccg accgctggcc cgaaacggca tcttgagccc ggtcatcgtg
     2161 atcgatgggc aggtggtggg aacctggagg cggtcgctgt cgaaacagaa cgtggtcatt
     2221 gccctggctc cgttcgcccg gctcaagccc ggcgcgaagc cggccctggt ccggtcggcg
     2281 aatcgatatg gtgggtttct ccaggttccg gccatcctga aataggtgag ccatgtccag
     2341 actcgtcgcg ttccttcggg gcatcaatgt cggcggacac atcgtcaaga tggatgagtt
     2401 gcgccggcat ttcacggcgg tgggatgcaa ggacgtcgag accttcatcg cgagcggcaa
     2461 tgtgatcttc gcgacgccct ccaggggcgc cgaggccctg cagcagcgga tcgaagaccg
     2521 gctccgccga gccctgggct acgaggtccc aaccttcctc cggaccgagc tggaggtggc
     2581 gggcatcgct ggtcaccggc ctttcgatgc cgcgcaactg gagagcgcgg tctccctcaa
     2641 tgttggtttc ctggccgagc cggtccgacc cgtcggcagg aaacggctga tggcgctgcg
     2701 aaccgaggtg gacgacttcc gggtaaacgg gcgggaggtg tattggctga gccggcggaa
     2761 gatcagcgag tccaccgttt cctacgcggc gctggagaag gccctggaga ccagcgccac
     2821 ctttcggggg ctgagaacgg tggaacggat cgcagcccgg ttagccgagt gaggtgtcag
     2881 cgggccttgc tcatcaggtc cagcaattcg gtgtacatcg cttcggcacg cccggaatcg
     2941 cccgactgaa acgccgcggt ggcgcagtgc cgcagatgat tctgaagtac gcttcgggca
     3001 gtgctgcgca acgcctcctg gaccgaagag atctgggtga tcacctcggc gcagtaacgc
     3061 tcctcctcga ccatccgctg caggccgcgc acctggccct cgatgcgccg gaggcggttg
     3121 agcacggtgc gcttgatttc tggatcgacg gccactggat ggcggccggc ggtctcctgt
     3181 gcggcgcaac cgcaggaggc ggtttccgag gtttcatcca tctgtgggct cggcgacgcg
     3241 gacgccgtag ccggcgtcct ccacggccgc ggtaatctgt tcgggcttga cgaccgcttc
     3301 gtcgaaacgc agatccgccc gcccgattcg aaccgattcg atcgataccc cctgaagcct
     3361 gcccagagcc tggttcaccg cgttcacgca gtggctgcag gacatgccgg agatattgag
     3421 tgtgaggggt cgggttggca tagggtcctc cgcaaactgg tgctggaata tatatacccc
     3481 ctccccctat catcaagcat tgcggctttt catgccgcag atgccagtat gagccacggc
     3541 tataagtgtc tataaacact agtcttacgt agttggtgct ggcaaggtac gattcatgct
     3601 cacatcatcc tgtccatgac tgcgatccgc ctgcccttcg gttcggggcc cgtagccggg
     3661 ctgttggtgc cggtcctgct gaatcaggac gggccgccgg atacggtcgg tgtggcggcg
     3721 tggcatctgg ccctctccaa cctgatcggc caggaggtcc cccacgacct gctggcgcta
     3781 tggctctttc cggcccgggg cggcgtgatg ctgctggcgc cggtggagct cggaagggac
     3841 cgggtggaga tcaccagtcc cgatcccttc ttgtcgcaac atcagatctt cgagctcgag
     3901 gaacgggtgc gtcacgccgg gtaccagtcc gtggtggctg tgccgatccg gagcggcacc
     3961 cgggatctag ggctcgccat cttcgcccat ctcgagccgg ggcggtatga cccggatcag
     4021 gtgatgcggc tgctcacgat gatgcgacag ctggtgcctg ccttcgctct gctggcggaa
     4081 tcacctcccc tggcgctcac cgcgggagcc gcggtggacc tgactcgaca gaatgccgcg
     4141 gaggcggtgg cccgcgcggc ggcggaggga cgaaccggca gcgaagtgtt gcggctggtg
     4201 tcgggcgtgc tccagtcgct ggtgccgcac gaccggatcg aagtggcggt acccggcatc
     4261 ggatccggaa cctgggccct gctgagcggc acgcccgaag gacgtcgctg gggcgactcc
     4321 acgccgcagg tctcgcaatg cgtcagcgct ctggtcgcgc gcgccggcga ggacggctgc
     4381 atcatcgtcg gagatctccg cgagctgggc gtgggatggc cggcgtaccg ggagacccgt
     4441 gcgttgcagc gggtccacgc ggtcatgggg gtacccttga cggtggcggg tggagatgag
     4501 gcgtggctgc tgctgggtgg cgcggcaccc catctctacc gcgagccgga ccgcgagttg
     4561 ctccgggccg tggcgccggt catcgccctc agggtccacg gcctgcggat ggccctcgac
     4621 gtgggagtgg cgcgggccca atcgtcggcg caacaggccg gacaatcccg tgccgcccga
     4681 ctggcctcgg cgctggccgg caccccgcac tggggcgacg ccgtcgggtt gttcgtccag
     4741 gatgtgcggg agtccctggg ttatcgcgac gtgcgcttcg cgctgcggct gggcgaaggc
     4801 acctacgtcg aggtgtcggc cggcgatctc cggccgctgg cctcgctggc ggtgcagccg
     4861 ctggcgcagt ccgccctgga gtcggtcttc agcggcagtg ctccgtttct ggtgcaggga
     4921 gagcaaggca acgatctggt ggtcccgctc cgcgttgccg gacgggtggt cggtgcgctg
     4981 gagctccgag acggatcgcc cggctcgggc ggccatccgg tgaccggcgc tcagctgttc
     5041 gccgatctca tcgcgcccca tctggagttg atccgccgca gcgcccttgg cggccgtccc
     5101 gacctgacca ccaccttcaa tcgctagtgc tgttccaact tgtcccccca aatactgatc
     5161 aatgaggcca gtctggttcg gagggtgaag ggtccgcgcc aaaacaaact tccgggatcc
     5221 tcgctatgcg gctaacaggt gtaacgtgcg ggcgcacccg cgcttgggga aacaagttgg
     5281 aacagcacta gacaacctac ctgaggctca ggggcgcagc gcccgggcgg cccacgccag
     5341 cagcaccagc agccccgacg cggcgatgat ggccgagccg gttggcaggt cgaacggaat
     5401 ggacatcaca aacccgaacc ccacagccag ggcggccgcg acgatcgcga ccgcgaagat
     5461 gccgcccatg ttacgggcca ccagaagacc cgtgacggcc ggcaggacca ggaagttgaa
     5521 gaccaggagc actcccgcgc tctgaatcgc gaacgcgatg acgaggccga tggtgaaata
     5581 cagaagcagg ttccagcgat ccacccgata tcctacggcg cgcgcggtct cgggatcgaa
     5641 cgagacgaag agaaactcct tgtaaaacag accgtgggtc agcagcaccg gaatactgac
     5701 cccgagctcg aggagggtat cccgccgggt cagcccgagg atgttgccgt gcaggtagag
     5761 atcgtgcgcc tccccggcgg cggctttggc gatgagcagc acccccaccg cgccggcgac
     5821 ggcgtaggtg accccgatgg tggcgtcggg gggaatgaga ccccgccggg tgcccagacc
     5881 gaacgccacc gcgcccagga gtgagaccac cagggcgaac agcaacggtt gggccagcgg
     5941 cccgctgatc aggccggctc ccgccagtag cagggcgagg gcgataccgg cgctggagag
     6001 ttgggccagt gcggcaccga cgaacacgat ccgccgcaac accacccaca ccccgagaac
     6061 cccgcaggtg accgcgatga ccagggtggc atagagcgca tcgcggaaca gcagaaccgc
     6121 gtcaagcacc cggccggccg tttcgttccc gatggcgcgc caggacgatc cggtgcccgg
     6181 caaaggaggc gacttcgacc gggatcccgt agagatcggt cagagaggcc tcggtgagga
     6241 cctctcccac cggcccgatc cggagcccgc cctccaccag cagggcgatc cgctcgacgt
     6301 aattggcgac ctcgttcagc gcatggctca ccatcagcac ggtgagcc
//
LOCUS       DASWKS010000203        10396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_466499, whole genome shotgun sequence.
ACCESSION   DASWKS010000203 DASWKS010000000
VERSION     DASWKS010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10396
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466499"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VGA78_06055"
     CDS             <1..796
                     /locus_tag="VGA78_06055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893465.1"
                     /translation="NDGTESPYGFGLVQGQHRGLRTVGHAGADHGYRADVVRFVDHGL
                     SVAALCNLGNINPSGLTRRVGEILLGQHLAPLPTAPQVITLNRQQLERWTGNYFDAKS
                     ELVLRIGFRGDSLAITQGPVLRPVAEDRFVPPDNQPEYRFNGTGIGVVLDVGSPGPGA
                     PPTRWQRQPAFTPDAAALRRYAGDFASDEVATQWRIEARDSVLVLKRPKSADATLRAV
                     FLDAFLVESQGLLIRFTQGRGGAVNGFLASAGRVRKVRFDAVNSEQ"
     gene            800..1378
                     /locus_tag="VGA78_06060"
     CDS             800..1378
                     /locus_tag="VGA78_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893466.1"
                     /translation="MNGDPMLPINSIVVFFALGFSSPLGAQVHDHRSQPQAGIPTEAG
                     QAAFAAIREIVAILEADSTTDWTKVDLEALRRHLITMDRVLMESQVVSRPIPGGIELD
                     VTGPDPVSAAITEMVGAHAGVLDRDPMLRGAAGPIAGGVRLRVTAEDPANARLVGRIR
                     GLGFAGLLATGEHHSVHHLAIARGQGGSAHQH"
     gene            1504..2616
                     /locus_tag="VGA78_06065"
     CDS             1504..2616
                     /locus_tag="VGA78_06065"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX9893467.1"
                     /translation="MRTLPAVMFLASACAAASSAPGPVTRTYYVAAEEVDWDYAPSDT
                     NRITGEAWSPLDLEFVERRDNRIGKVYRKAVFREYTDSSFTTRKPRPAEWEHLGMLGP
                     LLRGSVGDTIRVVFRNLAGHPHSMHPHGVIYNKDSEGAPYADGTSGADKADDQVPTGG
                     THVYVWPIPERAGPGPMEPSSVFWMYHSHANEGSDVNEGLVGPMVVTARGKAKPDGSP
                     VDVDREFVVLFGEFDENVSLYYEGNITAYALKPKSVTRLVPFSDPQYLANLRETMNGL
                     SFGHTPGLRMRVGERVRWYVFGATNFEIHAPHWHGQTALANHMRTDVLSLMTMQMVTA
                     DMVPDNPGTWLFHCHVAPHLIAGMAALFTVEPAGGE"
     gene            complement(2695..5142)
                     /gene="leuS"
                     /locus_tag="VGA78_06070"
     CDS             complement(2695..5142)
                     /gene="leuS"
                     /locus_tag="VGA78_06070"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX9893468.1"
                     /translation="MSEHVPHGYQPAQVEAKWQARWAERHTNEPDLDRAERPFYNLMM
                     FPYPSAEGLHVGNFYAFTGADVHGRFRRLQGYDVFEPIGFDAFGIHSENFALKMGIHP
                     AELIPRNIANFRRQFLQLGGMFDWRHELSTTDPAYYKWTQWIFLQLFQAGKAYKKKAA
                     VNWCPNDKTVLANEQVINGACERCGAMVEQRMLEQWFFRITDFAERLLRNLDDPSRMD
                     WSESTRAAQRNWIGRSDGARIDFETDAGPIKVFTTRPDTIFGATFLVVAPEHPLAEAL
                     TTSPELAAVEQYRRAAAAKDLVSRKVGEREKTGVFTGSSAVNPATGKLIPVWVADYVL
                     MEYGTGAIMGVPGHDERDFAFATRYGLPIVRVLAGPDQGPDTPLTAAVEDVGGMRLVN
                     SGPFSDLPQASGFRAIVEWLEQVQAGRGVVQYRLHDWCISRQRYWGPPIPIIYCEKCG
                     AVPVPDRDLPVLLPELEDFRPDDTGVSPLARNKAWYEVPCPRCGGQAHRETDVSDTFL
                     DSAWYFLRYTSTEFDDRAFDADRVGRWLPVATYIGGNEHAVLHLLYARFVTMVLHDQG
                     LLPFEEPFRKFRAHGLIVKDGAKMSKSRGNVVIPDEYITRWGADAFRMYLMFLGPFEE
                     GGDFRDEGMSGPRRFLDKVWDLVQQCGQQTLHGEELHHSIVVKWHQTKKRVTEGLETL
                     SYNTAIAALMEFLNALRAVNCMERQIVKDLIVMLAPFAPHFAEECWEKLGREASVFEA
                     RWPTWDEGLTVELRVEVPVQVNGKVRSRVHVIRGAREDDVVAAALQDEAVRRFTEGKE
                     IRKRIYVKDRLLNLVVQ"
     gene            5289..5726
                     /locus_tag="VGA78_06075"
     CDS             5289..5726
                     /locus_tag="VGA78_06075"
                     /inference="COORDINATES: protein motif:HMM:TIGR02293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HEX9893469.1"
                     /translation="MTVSPQRVARILGGERMLGRRVRTLADLRELVESGLPVESLALV
                     VAHVTGSEGAATELKHRVVPKATLHRRRRRLSPEESERLERLARLAALAEEVWEDPTL
                     ASEFLTSPQPQLGGERPVDLSRSDLGARQVEQLLMKLAYALPV"
     gene            5735..6187
                     /locus_tag="VGA78_06080"
     CDS             5735..6187
                     /locus_tag="VGA78_06080"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HEX9893470.1"
                     /translation="MVAWRTCKTRHDPWDGTGAALEGGRWNSPGRPVLYAADTFAGTL
                     VEILAHSARPRTLPGAHHSIRLDLPDELLEELQPGSLSGWHLPYSMAARAFGDQWLVE
                     ARTPVLVVPSVPARPVGRSVLINPMHAEAPRIARSAPFVVRWDDRLFV"
     gene            6196..8253
                     /gene="eutB"
                     /locus_tag="VGA78_06085"
     CDS             6196..8253
                     /gene="eutB"
                     /locus_tag="VGA78_06085"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF018461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008851 - ethanolamine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HEX9893471.1"
                     /translation="MELRSSLVLANEFKEGDLLVGGTTDDLVRAEARRVIEELTLRQI
                     GATPLVDDGVTETLARAVDRERAAEIGGLRVAQVRGLLLGPEGESWVGRYRAGLSSEA
                     IAALVKIMTTEQLSAVARRVFNPLPGSGVCIGAPNHLGSRIQPNSPGDDEQEILLSIL
                     EGLSYGCGDVILGINPAADDVDTIGRLSELLSRVRERLVLPTRTCVLSDIVKLTAARS
                     RARLDVGFQSLAGTSRALAGMVGLDVDGILDLARGFEGLYFETGQGSEVTNGAAEGVD
                     MVTLESRTYGVARLIQRQAGKWTIVNDVAGFIGPEVFRSGDQLERACLEDSVMAKLHG
                     LTMGLDVCATFHMGIAPSELEPLTQTIAERAAPAYLMAVAGKADPMLGYLTTSFREHP
                     RLRARTGRRTTTVMENWQRDLAGSKGAVVGALYARYIRAGGDTRSREELSLEATRLVE
                     RLREQGWDLGHEDGPGGVAPAEVNTRLEAIYAHARRALYARIDPSVVREVSPRHLVVR
                     SEARDREDYLSHPPAGERIRATDASRIGELYPDRRPRVQIVLSDGLNADALSENLPAV
                     LPALRRLLAQAGVEVGERDLLVENGRVRAGYHVGALLQVEGVVHLIGERPGTGLNTLS
                     AYLTYGRDRQGRSHWRPDLDHSCTTAICGIHRRGKKPEAAVQEITRAVVRMLEERKSG
                     VGV"
     gene            complement(8270..10018)
                     /locus_tag="VGA78_06090"
     CDS             complement(8270..10018)
                     /locus_tag="VGA78_06090"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9893472.1"
                     /translation="MASLPTVELLGLQNALAGRFAVERLLGQGGMGLVFLARDLTLER
                     PVAIKLLAPSLARDPAYRQRFLREARAAARLSHPNIVPVHSVEDHGSLVCFIMGFVDG
                     ETLAQRVRRAGPLPDADALRMMREVAWALGHAHAFGIVHRDIKPDNILLERHTGRALV
                     SDFGLAVPVADEPGASAPMGDRLGTPAHMSPEQSAGESVDGRSDLYSLGSTAYFAVTG
                     RLPFDGSADQMLRARMTRPAPSVAALRPDFPLPFSHAIDRCLATDREARPESAEALLG
                     LLTETRPALTEAPLPVASYVREAGQVFADVGATLIAGTSALVIYGLAFRDDMFAAIAF
                     YPIAALLYGVGLTRFGELVLRTRTLVSQGYTHDAVRPAVELEVRRETAERALLTAQPR
                     RLTDRPAVMAAIGAAKTAMFVWLATRKIDTLTLIGVAGAVIIPAATLRQIWRTSGRFA
                     GLWARILKGRLGKWLFGIARIGQRGRALPAADAPTAVFIGDAALRLFEALPAERRREL
                     DVLPEIVARLQADALDSTDGQRMNALTALENLRIDLLRLQAGEVQADQLTHDLDRARE
                     LSRVMDDAMANRKLLP"
     gene            10082..>10396
                     /locus_tag="VGA78_06095"
     CDS             10082..>10396
                     /locus_tag="VGA78_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893473.1"
                     /translation="MPSSRHPLNRALEAFGVLSIVATAVVTAVLVIQAEYRIRVQEQG
                     RRLQLVARATVDLLDLLPEVQAATVRALPDRVTAALHDLARGEGDADGISVTAEGGRV
                     LWA"
BASE COUNT         1694 a         3416 c         3606 g         1680 t
ORIGIN      
        1 caacgacggc accgaatcgc cctatggctt cggcctggtc cagggacagc accgcggtct
       61 gcggacggtc ggtcatgccg gcgcggatca cggctatcgg gccgacgtcg ttcgcttcgt
      121 ggatcacggc ctgtcggtcg cggcgctctg caacctcggg aacatcaatc cgtcgggact
      181 gacccgtcgg gtgggcgaga ttctgctggg tcagcatctc gcgcctctcc ccaccgctcc
      241 ccaggtgatc accctcaacc gccaacagct ggagcggtgg acgggtaatt acttcgatgc
      301 gaagagcgag ctcgtgctgc ggatcggatt ccggggggat tcgctggcga tcacccaggg
      361 gccggtgctt cggccggtgg ccgaggaccg atttgtgccg ccggacaacc aaccggagta
      421 tcggttcaac ggcaccggca tcggcgtggt cctggacgtc gggtcgcccg ggccgggagc
      481 gcctccgact cgctggcagc gacagccggc tttcacgccg gacgccgcgg cgctgcgacg
      541 gtacgccgga gacttcgcca gcgatgaagt ggccacccag tggcggatcg aagcccgtga
      601 ctcggtgctg gtgctcaagc gacccaagtc cgccgacgcg accctgcggg cggtgttcct
      661 cgatgcgttc ctggtcgagt cacaggggct gctgatccga ttcacccagg ggcgcggtgg
      721 ggccgtcaac gggtttctcg ccagcgccgg ccgggtgagg aaggtgcggt tcgatgcggt
      781 caacagtgaa caatgaacag tgaacggtga cccaatgctc cccatcaatt ccatcgtggt
      841 gttctttgcc ctcggcttct catcgcctct gggggcgcag gtccacgacc acaggtccca
      901 gcctcaagcc ggcatcccca ccgaggcggg gcaggccgcg ttcgccgcca tcagggagat
      961 tgtcgcaatt ctggaagccg actccaccac cgactggacc aaggtggatc tcgaggcgct
     1021 gcgccggcac ctgatcacca tggatcgggt gctgatggag tcgcaggtgg tctctcggcc
     1081 gataccgggt gggatcgagc tcgatgtgac cgggcccgac ccggtgtccg ctgccatcac
     1141 cgagatggtc ggcgcccatg ccggcgtact ggaccgggat cccatgctgc gaggggctgc
     1201 cgggccgatc gcgggtgggg ttcggctccg ggtgaccgcc gaagatccgg ccaatgccag
     1261 gctggtgggc cggatccggg gcctgggctt cgccggcctt ctggcgaccg gcgagcacca
     1321 cagcgttcat cacctggcga tagcccgggg gcagggcgga tcggcccacc aacactgaag
     1381 tcgaaggcgg tcgaagacgg tcgaagccgg tcggaaaacg atcccttctg gcgtttccga
     1441 tctaagtctt gcatgttccc cctaccgcac accatcacct atcgatcatc gccagggggc
     1501 tccatgcgta ccctgcccgc cgtcatgttt ctggcgtcag cctgtgccgc cgcatcctcg
     1561 gctccgggac cggttacccg cacctattac gtcgccgccg aggaggtgga ctgggattac
     1621 gcccccagcg acaccaaccg gatcacgggc gaggcctgga gtccgctgga cctggaattc
     1681 gtcgagcggc gtgacaaccg gatcggcaag gtctatcgca aggccgtctt ccgggaatac
     1741 accgacagca gctttaccac ccggaagccc cggccggccg agtgggagca cctcggcatg
     1801 ctgggcccgc tgctccgggg cagtgtcggc gatacgatcc gggtcgtgtt ccggaacctg
     1861 gccgggcacc cgcacagcat gcacccgcac ggggtcatct acaacaagga ctccgagggc
     1921 gcgccctacg ccgacggcac gtcgggcgcc gacaaggccg atgatcaggt gccgacgggc
     1981 ggcacccacg tgtatgtctg gcccattccg gagcgggccg ggccgggacc gatggagccc
     2041 agctcggtct tctggatgta ccactcccat gccaacgagg ggtcggatgt gaatgagggc
     2101 ctggtcgggc cgatggtcgt gaccgcgcgc ggcaaggcca aaccggatgg atcgcccgtg
     2161 gacgtggatc gggagtttgt ggtgctgttc ggggagttcg acgagaacgt gagcctgtac
     2221 tacgagggga acatcaccgc ttacgcgctc aagccgaagt cggtcacgcg attggtaccg
     2281 ttctcggacc cgcagtacct ggccaatctg cgggagacaa tgaacggtct ctcgttcggg
     2341 catacgcccg gtctgcggat gcgggtgggc gagcgggtcc gctggtacgt gttcggcgcc
     2401 accaacttcg agatccacgc accccactgg cacggccaga ccgcgctcgc caaccacatg
     2461 cgtaccgatg tcttgagcct gatgaccatg cagatggtga ccgcggacat ggtgcccgac
     2521 aatccgggga cctggttgtt ccactgccac gtggctccgc atctgatcgc ggggatggcg
     2581 gcgctcttta ccgtggaacc ggcgggtggg gaatagggtg tcgcgaacag tgaaccgtga
     2641 atagtgaacg gtaaacggcc gagcgttcac tgcttactgt tcaccgttca ccgttcactg
     2701 taccacaagg ttgagtaacc ggtccttcac gtagatccgc ttccggatct ctttcccctc
     2761 ggtaaaccgg cgaacggctt cgtcctgcag cgccgcggcc acgacgtcat cctcccgggc
     2821 gccgcgaatc acgtggaccc gcgaccgaac cttgccgttt acctgcaccg gcacctcgac
     2881 ccgaagctcc accgtcaggc cttcatccca ggtgggccac cgggcttcga acacgctggc
     2941 ctcacggccc agcttctccc agcactcctc ggcgaagtgc ggggcgaagg gcgccagcat
     3001 cacgatcagg tccttgacga tctggcgttc catgcagttg accgcccgca acgcgttcag
     3061 gaattccatc agcgccgcaa tggcggtgtt gtaggagagg gtctccagcc cctcggtcac
     3121 ccgcttcttg gtctggtgcc atttgaccac gatcgagtga tgcagctcct cgccgtggag
     3181 ggtttgctgg ccgcactgct ggaccaggtc ccagaccttg tcgaggaacc ggcggggacc
     3241 gctcatacct tcgtcgcgga agtcgccccc ttcctcgaac ggacccagga acatcaaata
     3301 catgcggaag gcatcggccc cccacctggt gatgtactcg tcggggatca ccacgttgcc
     3361 ccgcgacttg gacatcttgg cgccgtcctt cacgatcagc ccgtgagccc gaaacttccg
     3421 gaagggctcc tcgaagggaa gcagcccctg gtcgtgcagc accatggtga caaaccgggc
     3481 gtacagcagg tgcagcacgg cgtgctcgtt gccgccgatg taggtcgcga ccggcaacca
     3541 gcgccccacc cgatcggcgt cgaaggcccg gtcgtcgaac tcggtgctgg tgtagcgcag
     3601 gaaataccag gccgaatcga ggaaggtgtc ggagacgtcg gtctcgcgat gggcctggcc
     3661 cccgcaccgg gggcagggca cctcgtacca tgccttgttc cgggccaggg gtgagacgcc
     3721 ggtgtcgtcg gggcggaagt cctccagctc cggaagcagg accgggagat cccggtcggg
     3781 caccggaacc gcgccgcact tctcgcaata aatgatggga atgggcgggc cccagtagcg
     3841 ctggcgcgag atgcaccagt cgtgcagccg atactgcacc acgccccggc cggcctgcac
     3901 ctgctcgagc cactccacga tcgcgcgaaa gccgctcgcc tggggcaggt cggagaacgg
     3961 tcccgagttg accagccgca taccgcccac gtcctccacc gccgcggtca gcggcgtatc
     4021 gggtccctgg tcgggcccgg ccagcacccg gacgatgggg aggccatagc gagtcgcgaa
     4081 ggcgaagtcg cgctcgtcgt gaccgggcac gcccatgatg gcgccggtgc cgtactccat
     4141 gagcacgtag tccgccaccc acaccggaat cagcttcccg gtggcgggat tgacggcgct
     4201 ggacccggta aacacgccgg tcttttcccg ctcacccacc ttgcgggaca ccaggtcctt
     4261 ggcggcggcg gcccggcgat actgctccac ggccgcgagc tccggcgagg tcgtcagcgc
     4321 ttcggccagc ggatgctccg gcgccaccac caggaaggtg gcgccgaaga tcgtgtcggg
     4381 gcgggtggtg aagaccttga tgggcccggc gtcggtttcg aaatcgatcc gggctccgtc
     4441 ggagcgcccg atccagttgc gctgggccgc gcgggtgctc tccgaccagt ccatccgcga
     4501 cggatcgtcg agattccgga gcagccgctc ggcgaagtca gtgatccgga agaaccactg
     4561 ctccagcatg cgctgctcga ccatggcgcc gcagcgctcg cacgccccgt tgatgacctg
     4621 ctcgttggcg agcacggtct tgtcgttggg gcaccagttg accgccgcct tcttcttata
     4681 ggccttcccc gcctggaaca gctggaggaa gatccactgg gtccacttgt agtaggccgg
     4741 atcggtcgtc gacagctcgt ggcgccagtc gaacatcccg cccagctgca ggaactgacg
     4801 ccgaaagttc gcgatgttac gagggatcag ctcggccgga tggatcccca tcttgagggc
     4861 gaagttctcg gagtggatcc cgaaggcatc gaacccgatc ggctcgaaca cgtcgtagcc
     4921 ctgcagccgg cggaagcggc cgtgcacatc ggcaccggtg aaggcgtaga aattccccac
     4981 gtggagcccc tcggccgagg ggtaggggaa catcatcagg ttgtagaagg gccgttcggc
     5041 ccgatccagg tcgggctcat tggtgtggcg ctcggcccag cgggcctgcc atttggcctc
     5101 gacctgggcg ggctggtagc catgggggac atgctcggac atggcggtga atctagacgg
     5161 gcgggcgggc ggacggacag acggaccgac agaccgacgg tccggggatg tgattgagcc
     5221 gaggcctcga ccgcggcttg cctctcttga gacttagatt ggttccatat gaaaccgctg
     5281 gagcccggat gaccgtcagc ccccaacgcg tggcccggat cctgggaggg gaacggatgc
     5341 tgggccggcg ggtccgtact ctggccgact tgcgggagct cgtcgagtcc gggctgccgg
     5401 tggagtcgct ggccctggtg gtggcacacg tcaccgggtc ggagggggct gcgacggaac
     5461 tcaaacaccg ggtcgtgccc aaagcgacgt tgcaccggcg gcgacggcgg ctgtctccgg
     5521 aggaaagcga gcggttggag cggctggctc ggctcgcggc cctggcggag gaggtgtggg
     5581 aggacccgac actcgccagc gagtttctca ccagtcctca gccgcagctg ggtggagaac
     5641 gtccggtcga tctgtcgcga agcgacctgg gcgcccgcca ggtcgagcaa ttgctgatga
     5701 aacttgcgta cgccttgccg gtctgagggc cgtcatggtt gcatggcgca cgtgcaagac
     5761 ccggcacgat ccctgggatg gaaccggcgc cgcgctcgaa ggcggacgct ggaattcgcc
     5821 gggacgcccg gtgctttatg ccgccgatac ctttgcaggc accctggtcg agatcctggc
     5881 ccacagcgcc aggccgcgaa cccttccggg cgcccatcac agcatccggc tcgacctgcc
     5941 tgatgagctg ctcgaagagc tgcagcccgg gtccctctcc ggctggcacc tcccctactc
     6001 gatggcggcg agagccttcg gcgatcaatg gctggtagag gcgcgcacac cggtcctggt
     6061 cgtaccctcg gttcccgccc gcccggtcgg ccgctcggtg ctcatcaacc cgatgcacgc
     6121 tgaggcgccg cggatcgcgc gcagtgcccc gttcgtcgtg cgctgggacg accggctgtt
     6181 cgtctagaat ccccgatgga gctacgctcg tcgttggttc tggccaatga gttcaaggag
     6241 ggcgacctcc tggtgggcgg gactaccgat gacctggtcc gcgccgaggc acggcgggtc
     6301 atcgaagaac tgaccctccg tcagatcggc gcgacgccgt tggtggacga cggagtcacg
     6361 gagaccctgg cacgcgcagt ggatcgcgag cgggcggccg agatcggcgg gctccgggtg
     6421 gcccaggtgc gagggctgct gctcgggccg gagggcgagt cctgggtcgg gcgctaccgc
     6481 gccggtctct ccagcgaagc gattgcggcg ctggtcaaga tcatgaccac cgaacaactc
     6541 tccgcggtcg cgcgaagggt gttcaatccg ttgccgggct cgggcgtctg catcggcgcg
     6601 cctaaccacc tcggctcccg gattcagccc aacagtccgg gggatgacga gcaggaaatc
     6661 ctgctctcga tcctcgaggg actgagctac gggtgcgggg acgtgatcct gggcatcaat
     6721 cccgcggccg acgatgtcga taccatcggt cgcctctcgg agctgctgag ccgggttcgg
     6781 gaacgactgg tgcttcccac ccgaacctgc gtgctctccg acatcgtcaa actgaccgcg
     6841 gcccggtcac gggcccggct ggacgtcggg tttcagagtc tggcgggaac ctcccgggcg
     6901 ctagcgggca tggtgggact cgacgtcgat gggattctgg acctggcccg ggggttcgag
     6961 gggctctact tcgagaccgg ccagggatcg gaagtcacca atggcgcggc ggagggcgtg
     7021 gacatggtga cgctcgagtc gcggacctac ggcgtagccc gcctcatcca gcgccaggcc
     7081 ggtaagtgga ccatcgtgaa tgacgtggcg gggttcatcg gcccggaggt attccggagc
     7141 ggcgatcagc tggagcgggc ctgcctggaa gattcggtga tggccaaact gcacgggctg
     7201 accatggggc tggatgtgtg cgccacgttc cacatgggga tcgcgccgtc ggagctcgaa
     7261 ccactcaccc agaccatcgc ggagcgggcg gcaccggcct acctgatggc ggtggcgggg
     7321 aaggccgatc cgatgctggg ctatctcacg acctcgttcc gggaacatcc ccggctccgg
     7381 gcccgcaccg ggcgtcggac gacgaccgtg atggagaact ggcagcgcga cctggcggga
     7441 tcgaagggcg ccgtggtcgg cgcgctgtac gcccggtaca tccgggccgg cggggatacc
     7501 cgaagtcggg aggagctgtc ccttgaagcc acccggctgg tggaacggct ccgggagcag
     7561 ggttgggacc tgggtcacga ggatgggccg ggcggagttg ctcccgcgga ggtgaacacc
     7621 cgactcgagg cgatctacgc tcatgcccgg cgggcgctct atgccaggat tgatccgtcc
     7681 gtggtgcgcg aggtgtcccc ccggcacctc gtggtccgct cggaggcccg ggaccgggag
     7741 gactatctca gccatccacc cgctggtgaa cggatccgcg cgacggacgc gagccggata
     7801 ggcgagctgt atccggatcg ccggccccgg gtgcagatcg tgctttccga tgggctgaac
     7861 gcggacgcgc tgtccgagaa tctcccggcg gtcctgccgg cgctccggcg attgctggcc
     7921 caagccggag tggaggtggg cgagcgggac ctgttggtcg agaacggccg ggtgcgcgcc
     7981 gggtatcacg tgggggcgct gctccaggtg gagggagtag tccacctgat cggcgagcgg
     8041 cccggaaccg ggctcaacac gctctccgca tacctcacgt acgggcggga tcggcagggc
     8101 cgctcgcact ggcgtcccga tctggatcac tcctgcacga ccgcgatctg cggcattcac
     8161 cggcggggca agaaaccgga ggcggcagtg caggaaatca cccgggcggt ggtgcggatg
     8221 ctcgaggagc ggaaatcggg agtcggggtc tagcgagagg accggcgctt cagggcagca
     8281 gcttccggtt ggccatggcg tcgtccatca cccggctcag ctctcgcgcc cggtcgagat
     8341 cgtgggtcag ctggtcggcc tgcacttcac ccgcctgcag ccggagcagg tcgatgcgaa
     8401 gattctccag tgcggtcagt gcgttcatcc gctgtccgtc ggtcgagtcc agcgcatccg
     8461 cctgaagccg cgcgacgatc tcgggcagca cgtccagctc tcgccggcgc tcggccggca
     8521 gggcctcgaa cagccggagc gccgcgtcgc cgatgaacac cgccgtcggg gcgtcggcgg
     8581 ccggcaacgc tctccccctc tggccgatgc gcgcgatccc gaagagccac ttccccaatc
     8641 gtcccttgag gatccgggcc cacagcccgg cgaaccggcc gctggtccgc cagatctggc
     8701 gcagcgtggc agccgggatg atcaccgcgc cggcgacgcc aatcagagtg agggtatcga
     8761 tctttcgggt cgcgagccag acgaacatcg cggtcttggc cgcgccgatg gcggccatga
     8821 cggccgggcg atcggtcagc cggcgaggtt gggcggtcag gagcgcccgt tccgccgtct
     8881 cgcggcggac ttcgagctcg accgccggcc gtacggcgtc gtgggtgtac ccctggctca
     8941 ccagcgtgcg ggtgcgtaac accagttcgc cgaaccgggt gagtcccacc ccgtacaaca
     9001 gcgcggcgat gggataaaac gcgatggcgg cgaacatgtc gtcccggaaa gccagaccat
     9061 agatgaccag ggccgaggtg cctgcgatca gagtcgcgcc gacgtcggcg aagacttgtc
     9121 ccgcctcccg gacataggac gcgaccggca ggggcgcctc ggtcagcgca ggccgagttt
     9181 ccgtcaacag cccgagcagg gcctcagccg actcgggccg ggcttcgcga tcggtcgcca
     9241 ggcaccgatc gatggcgtgg gaaaacggga gcggaaaatc aggccgaagc gccgcgaccg
     9301 atggtgccgg gcgcgtcatt ctggcccgga gcatctgatc ggccgatcca tcgaacggaa
     9361 gcctgccggt gacggcgaaa tacgccgtcg agcccagcga atagagatcg ctccggccgt
     9421 cgaccgattc acccgccgac tgctccgggc tcatatgggc cggggtgccg agccggtcgc
     9481 ccatcggtgc cgatgcgcca ggttcgtccg caaccgggac ggcgaggccg aagtcggaga
     9541 ccagcgcccg gccggtgtgt cgctccagca ggatgttgtc gggcttgatg tcgcgatgca
     9601 cgatgccgaa ggcatgggcg tggcccagcg cccaggcgac ctcgcgcatc atcctgagcg
     9661 cgtcggcgtc gggaaggggg cccgcccgcc gcacccgctg ggccagggtc tcaccatcga
     9721 cgaatcccat gatgaagcag accagactgc cgtggtcctc caccgagtgc accggcacga
     9781 tgttgggatg ggacagccgc gccgccgcgc gagcttctcg gagaaatcgt tggcgatatg
     9841 ccggatctcg tgccaggctc ggcgccagca gtttgatggc aaccggccgc tccagcgtca
     9901 ggtcgcgggc caggaagacc agtcccatgc cgccctggcc cagcaaccgc tccacggcaa
     9961 accggccggc cagagcgttc tggaggccga gcagttcgac ggtgggtagc gaagccatga
    10021 cggtggagga tggtgcttgc cgtcgccggc ggcaagccgc ttgtatcttt gtggtgactc
    10081 catgccatca tcccgtcacc cgctcaaccg cgccctggaa gccttcgggg tgttgtccat
    10141 tgttgccacc gccgtcgtca cggcggtgct ggtgatccag gccgagtacc ggatccgggt
    10201 ccaggagcag ggtcgccgct tgcaactcgt agcccgggcc acggtcgatc tgctggacct
    10261 ccttcccgag gtgcaggcgg ctaccgttcg ggctctgccc gaccgggtca ccgcggcgct
    10321 gcacgacctc gcccggggcg aaggcgacgc cgacggcatc agcgtgacgg cggagggtgg
    10381 gcgggtgctg tgggcc
//
LOCUS       DASWKS010000204         6079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1580906, whole genome shotgun sequence.
ACCESSION   DASWKS010000204 DASWKS010000000
VERSION     DASWKS010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580906"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..560)
                     /locus_tag="VGA78_06100"
     CDS             complement(15..560)
                     /locus_tag="VGA78_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893474.1"
                     /translation="MRRIILALALLQLPISLQAQGVMDGLSPGTRSQLKKMFAMATAK
                     DLPTDLMWKQVAEGQSKGVAEGQILAETSRMMGQLEAARSALLRVGRKEVPDQDVSLG
                     ACVLSRGATPEQLETMAGKAAGRRPLAVALKVVTTLVDQGLPLDHALQQVGARLDAGA
                     TDEQLLALKNELRLGMGRARN"
     gene            1005..2990
                     /locus_tag="VGA78_06105"
     CDS             1005..2990
                     /locus_tag="VGA78_06105"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9893475.1"
                     /translation="MSPPLIGLLLVATTVAAQPRPLSQADLGRIASIGEVRMSPRGDR
                     VAYVQSYNDYAANRSRSGIVILAVPGGEEMRTIAGSSPRWSPDGSKVAFSATREGRSG
                     IWIHDIGAGTDRFLVAVHQTDHWLGRGANKNFEWSPDGRWIAYVAAEGPARQPESDVR
                     AYSRLMWKTRTGFSDDRKTHIWVMPAAGGQPRLLTPGKYDEHSVAWAPDSKRLAFVSD
                     RSADPDDSFANDLFILDLTSGSATRLTNTASAEFLPAWSPDGQWIAFEGWVRSNNTKD
                     SPAEDTKLFVISASGGRPRQVARALDRRVGEISWHPRGALYFTAGDRGRTAIYRALPV
                     DTLAEPLIHGDFQARGYSMDARGASMAFLRSDPSSPPEVYVAETGGRVPRALTRLHDV
                     LRQDVALADADEFWAQSSDGTPVQGWLMKPAGFRDDERYPLILNIHGGPHGMYGWTFS
                     DRFQLQTAAGYGVLFINPRGSSGYGQRFSDGSVLNWGGGDYQDLMAGLNEAIGRNPWI
                     DTTRLGVTGGSYGGYMTNWVISQTGRFKAAVASASVSNLISFYGTSLYTDLIESEFRG
                     RPWKNWDMLWQWSPLAHVEGVTTPTLFIHGEVDHDVPITQAEEMFVALRKQGVPATLV
                     RYPNEGHGLRQPAHVLDSIRRTLAWFDRYLKGRPATD"
     gene            2994..4568
                     /locus_tag="VGA78_06110"
     CDS             2994..4568
                     /locus_tag="VGA78_06110"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9893476.1"
                     /translation="MTTDIPAELQAALGDRFELRRVLGRGGMATVYLAHDHRHHREVA
                     LKLFRPDLAASIGTDRFLHEIQIAARLTHPHILALHDSGEAGGFLFYVMPYIEGLSLR
                     QRLEHHGMLMPAEVLSIVTPVAGALSYAHRMGVLHRDIKPENILFSEGHPVVADFGIA
                     KAISTAGGVNLTRTGFPLGTPGYMSPEQALGLTDLDGRTDVYSLAVVTYEMLVGSVPG
                     CWPTEDAVRSGRFLEASGPHRARLAQVGDRIECALVRALAVRLDQRTETPGHFIEELS
                     GAAPPRRRFNQHEVQEIVRRASELEATSPTMSGALTLGGVEALAGEVGIPRDMVRSAA
                     ESLAMSDPPTDSGLLAPSNRWLGGPTKLLYERVIEGELPEGEFPVMVGEIRRVLQNVG
                     QVSQLGRSFSWSSHRSSARTEIEVSVVVHGGRTRILIQENLANLIGGIYGGIGGGLGG
                     GGMGPIAGGIAAGLGAPFLLPIVIPLWIATVYGIARTVYARSASKRQRTLQELGDRLV
                     ALARELALPPQSIISR"
     gene            complement(4555..4911)
                     /locus_tag="VGA78_06115"
     CDS             complement(4555..4911)
                     /locus_tag="VGA78_06115"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9893477.1"
                     /translation="MQVVLANITAFNRRDLEAFLSTYASDAQMIDLPSGRMLTTGTAT
                     LRERYRDQFENDCLETMGVACPDLQVTIVDTQTVGNYVIAKEAARLKKDTPPLQLVVI
                     YEVINARISRAWFIGK"
     gene            complement(5031..5543)
                     /locus_tag="VGA78_06120"
     CDS             complement(5031..5543)
                     /locus_tag="VGA78_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anthrone oxygenase family protein"
                     /protein_id="HEX9893478.1"
                     /translation="MPFVGRVVLWLFVINLGIALGAGLYEGRISVSRWTGSAPGLAPR
                     WDAEAARQDDPGRRFWVFVTTGPLTLLTVASFFAAMRAPPRVRAWWLAAAGAATADRV
                     FTYAYFIPTMLALMRVTDASAADLAKAREWAGLNYLRHAIVLAALVTALKTFALAYQV
                     SRSIRGDRFV"
     gene            complement(5572..5793)
                     /locus_tag="VGA78_06125"
     CDS             complement(5572..5793)
                     /locus_tag="VGA78_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEX9893479.1"
                     /translation="MNRDWIEGNWKQVKGKVRERWGKLTDDDLDVIAGRREQLIGRIQ
                     ELYGTAKTEIERELDDMEPGDIGPREPRV"
     gene            complement(5807..5980)
                     /locus_tag="VGA78_06130"
     CDS             complement(5807..5980)
                     /locus_tag="VGA78_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 family protein"
                     /protein_id="HEX9893480.1"
                     /translation="MLRLAELLLVIGLIAAAFGFGGIAATPPGFARMVFVIYVIAIIS
                     ALTLTMFRRPPAA"
BASE COUNT         1007 a         2014 c         2039 g         1019 t
ORIGIN      
        1 tctgcatcct gccttcagtt tctagcgcgc cccattccca gacgaagctc gtttttgagc
       61 gcgaggagct gttcgtcggt ggccccggcg tcgagtcggg cgccgacctg ctgcagcgcg
      121 tggtcgagcg gcaggccctg gtccaccaac gtggtcacca ccttcagggc gaccgccaaa
      181 ggccgccggc cggccgcttt gccggccatc gtctcgagct gctcgggcgt ggctccacgc
      241 gagagcacgc aggcacccag ggatacgtcc tgatccggga cttccttgcg ccccacccgc
      301 aggagcgcgc tccgggccgc ctccaactgc cccatcatcc gggaggtctc ggccaggatc
      361 tggccttcgg ccactccctt cgactgtccc tccgcgacct gcttccacat caagtcagtc
      421 ggcaggtcct tcgcggtcgc catcgcgaac atcttcttca attgagagcg ggtccccggt
      481 gaaagcccgt ccatcacgcc ttgggcttgg agggagatgg ggagctggag gagcgcgagc
      541 gcgaggatga tacgtctcac tgttatttcc cggcgacgac aagactcgca gtggcgacaa
      601 ccgtgccacc gtgaagggga tttgacggag cggacggaac cccccacagc gagggaagtt
      661 accggcccgt ccctgaatga ggcgccggaa cctcgggttg gagaagtctc aggacgggga
      721 catccgcctg ggacggaaga tgctcccatt tgagggctat ggcgtcggcg ttcgccgggc
      781 aaagcgatcc gcagctgacg cggattacgc agagtacaaa cccatcagtt ttgctttgcg
      841 tcgtgtttgc ttttgctcct tttatccgcg taatccgcgt catctgccga tcgcctttga
      901 aaggaatcgg atggtacccg gagccctcac gaaaacgccg gaagccacta gaattcaccg
      961 tatcacccgt gacaaatggt ctcgcacagg gtaccggcat gacaatgtct cccccgttga
     1021 ttggcctgct tctggtcgcg accaccgtcg cggctcagcc acggccgctg tcccaagcgg
     1081 acctggggcg gatcgcgtcg atcggcgagg tccggatgtc tccccgaggc gatcgggtgg
     1141 catatgtcca gtcgtataac gattacgccg ccaatcggag ccggagtggg atcgtgattc
     1201 tcgcggttcc gggcggcgaa gagatgcgca cgattgccgg gagctcgccc cgctggtcgc
     1261 ccgatggatc gaaggtcgcg ttcagcgcca cccgggaagg ccggagtgga atctggattc
     1321 acgatatcgg cgccggcacg gaccggtttc tggtggccgt tcaccagacc gatcattggc
     1381 tcggccgggg agcaaacaag aacttcgagt ggtcacccga cggccgctgg atcgcctacg
     1441 tggccgcgga aggtccggcg cgccagccgg agagcgatgt gcgggcctat tcccgcctca
     1501 tgtggaagac ccgtaccggc ttcagcgatg accggaagac ccacatctgg gtcatgccgg
     1561 ccgccggcgg tcagccgcgg cttttgacgc ccggcaagta cgacgagcac tcggtggcct
     1621 gggcgcccga ttccaaacgg ttggccttcg tcagcgaccg ctcggcggat ccggacgact
     1681 ccttcgccaa cgatctcttc atcctggacc tgaccagcgg gtccgccacc cggctcacca
     1741 ataccgcgag tgccgagttt ctgccggcct ggtcaccgga cgggcagtgg attgcgttcg
     1801 aaggctgggt ccggtccaac aacaccaagg acagcccggc ggaggacacc aagctattcg
     1861 ttatatccgc atccggcgga cgcccccgcc aggtggcacg cgccctggac cggcgggtgg
     1921 gtgaaatcag ctggcatcct cggggcgcgc tctacttcac ggcgggggat cggggccgga
     1981 ccgcgatcta ccgggcgctg ccggtcgaca cgctggccga gccgctgatc cacggcgatt
     2041 tccaggcccg aggctattcg atggacgcac ggggtgcctc gatggccttt ctccgctccg
     2101 acccctccag tccgccggag gtgtacgtcg cggagaccgg cggccgggtg ccccgggcac
     2161 tcacccggct gcacgacgtg ctgcggcagg atgtggcgct ggcggacgcg gatgaattct
     2221 gggcccagag ctccgacggt acgccggtgc agggttggtt gatgaaaccg gccggcttcc
     2281 gggacgacga gcgctatccg ctcatcctca atattcacgg cgggccgcac gggatgtacg
     2341 gctggacctt ctcggaccgg ttccagctcc agactgccgc cggctacggg gtgctcttca
     2401 tcaatccgag gggttcgtcc ggctacggcc agcgattctc cgacggctcg gtgttgaact
     2461 ggggtggagg ggactaccag gatctgatgg cggggctgaa cgaggccatc gggcgcaacc
     2521 cgtggatcga caccacgcgg ttgggggtga ccggcggaag ctacggcggc tacatgacca
     2581 actgggtgat cagccagacc ggccggttca aggccgcggt cgccagcgcc agcgtgagca
     2641 acctgatctc gttctacggc acctcgcttt acaccgacct gatcgagtcg gaattccggg
     2701 ggcggccctg gaagaactgg gacatgctgt ggcaatggtc cccgttggcc cacgtcgagg
     2761 gggtcaccac acccacgctc ttcattcacg gcgaagtgga ccacgacgtc ccgatcacac
     2821 aggccgagga gatgttcgtg gcgctacgga agcagggcgt gccggcgacg ctggtacgct
     2881 atcccaacga ggggcacggg ctgcgccagc cggcccacgt gctggattcg atccggcgga
     2941 ccctcgcctg gttcgatcgg tatctcaagg gccggcccgc caccgactga tccgtgacga
     3001 ccgacatccc cgccgaactt caggccgcgc tgggcgaccg cttcgagctg cgccgggtgc
     3061 tcggtcgggg cgggatggcg acggtgtacc tggcccacga ccaccggcat caccgcgaag
     3121 tggcgctcaa gctgtttcgt cccgatctcg cggcctccat cggcaccgac cgcttcctgc
     3181 atgaaatcca gatcgcggcc cggctgaccc acccgcacat cctggccctg cacgactcgg
     3241 gtgaggccgg cggctttctg ttctacgtca tgccctacat cgagggcctg tccctgcggc
     3301 aacgcctgga acatcacggg atgctgatgc cggccgaggt gctctcgatc gtcacgccgg
     3361 tcgcgggcgc gctcagctac gcccatcgga tgggtgtgct tcaccgcgac atcaagccgg
     3421 agaacatcct cttctcggaa ggccatcccg tcgtcgccga cttcggcatc gccaaggcga
     3481 tcagcaccgc cggcggggtc aatctcaccc ggaccggctt cccgctaggc acgcccggct
     3541 acatgagccc ggaacaggcg ctcggcctca ccgatctgga cggacggacc gatgtctaca
     3601 gcctggccgt ggtgacatac gagatgctgg tcgggtcggt ccccggctgc tggcccaccg
     3661 aggacgcggt gcggtcgggc cggtttctgg aagcctcggg gccccaccgg gcccggctgg
     3721 cccaggtcgg cgaccggatc gagtgcgcgc tggtgcgcgc cctcgcggtg cgactggatc
     3781 agcggacgga aacgccgggc cacttcatcg aggagctaag cggggcggct ccgccgcgcc
     3841 ggcggttcaa ccagcacgag gtgcaggaga tcgtccggcg agcctccgag ctggaggcga
     3901 ccagccccac gatgagcggt gcgctgaccc tgggcggggt cgaggcgctg gccggtgagg
     3961 tcgggatccc gcgcgacatg gtgcgttccg ccgccgaatc gctcgcgatg tcggacccgc
     4021 cgaccgattc ggggctgctg gccccatcca accggtggtt aggcggcccc accaaactgc
     4081 tctacgagcg ggtgatcgag ggggagctgc ccgagggcga gttcccggtc atggtcggcg
     4141 agattcgccg ggtcctgcag aatgtggggc aggtcagcca gctgggccgt tcgttttcat
     4201 ggagctccca ccgaagctcg gcgcgaaccg aaatcgaggt gagcgtggtg gtgcacggtg
     4261 ggcgtacccg cattctgatc caggagaacc tggccaatct gatcggcggc atctacggcg
     4321 ggatcggggg tggactggga ggcggaggca tgggcccgat tgccggcggg atcgcggccg
     4381 gtctgggcgc gcccttcctg ctgccgatcg tgataccgct ctggatcgct accgtctacg
     4441 ggattgcgcg cacggtctac gccagatccg ccagtaagcg gcaacggacc ctgcaggagc
     4501 tgggcgaccg gctggtggcg ctggcgcggg agctggccct gcctccgcag tccatcattt
     4561 cccgatgaac caggcccggc tgatgcgggc attgatgacc tcgtagatca ccaccagctg
     4621 gagcggcggg gtgtccttct tgagtcgggc cgcttccttc gcgatgacgt aattgccgac
     4681 ggtctgggta tcgacgatgg tgacctgcag gtcggggcaa gccactccca tcgtttccag
     4741 gcaatcgttc tcgaactgat cccggtagcg ctccctgagg gtcgcggtac cggtggtcag
     4801 catccggccg ctgggaaggt cgatcatctg cgcatcggac gcgtaggtcg agaggaaggc
     4861 ctcgagatcc cgccggttga acgccgtgat gttagccagg accacctgca tcggtgcgac
     4921 cgtattcgcc accggtcgct tcaggctagc cggttgctgg gtctccgccg gcccggcgag
     4981 acacaggctg ccggcgaagc atgcggcgag tactaacgga gcgcggcagt tcatacgaac
     5041 cgatcccctc ggatggagcg ggacacctgg taggccaggg cgaacgtctt gagcgccgtg
     5101 accagcgcgg ccaatacgat ggcatggcgc agatagttga ggccggccca ttcgcgggcc
     5161 ttggccaggt ctgcggccga cgcatcggtc acccgcatga gcgccagcat ggttggaatg
     5221 aaatacgcat aggtgaacac ccgatcggcg gtcgccgccc cggccgcggc cagccaccag
     5281 gcgcgaaccc ggggcggcgc gcgcatggcg gcgaagaagc tggcgacggt caggagggtg
     5341 agcggaccgg tggtcacaaa aacccagaag cggcgaccgg ggtcgtcctg ccgggccgct
     5401 tccgcatccc agcgcggagc cagaccgggg gccgagccgg tccagcgtga cacgctgatc
     5461 cttccttcgt acaacccggc accgagcgcg atgcccaggt tgatgacaaa cagccacaat
     5521 acgactcgcc cgacgaatgg caccccttcg ggcctggcgg tccgatgcgg atcagacgcg
     5581 gggttcccgg gggccaatgt cgcccggttc catgtcatcg agttcccgct cgatctcagt
     5641 cttggcggtc ccgtacaatt cctgaatccg gccaatcagc tgctcccggc ggccggcgat
     5701 gacgtccaag tcatcatccg tcagcttgcc ccaccgttcc cggaccttcc ccttgacctg
     5761 cttccagttg ccttcgatcc aatcgcggtt catgtgggcc tcctgtctag gccgccggcg
     5821 ggcggcggaa catggtcagc gtcagcgcgc tgatgatcgc gatcacatat atgacgaaca
     5881 ccatccgggc gaagcccggt ggcgtggctg cgatgccgcc gaagccgaag gccgcggcaa
     5941 tgagtccgat gaccagcaac aattccgcga gacggagcac tattcctccc tggcctggac
     6001 ggccggctgg cgaataccaa aggcgcgggt ggcgccgcgg aaacaccccc gcgccacccg
     6061 cgccttcgac tggcggcgt
//
LOCUS       DASWKS010000205         4082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_93822, whole genome shotgun sequence.
ACCESSION   DASWKS010000205 DASWKS010000000
VERSION     DASWKS010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93822"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VGA78_06135"
     CDS             complement(<1..546)
                     /locus_tag="VGA78_06135"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9893481.1"
                     /translation="MHPEWIDQLSAYLDGELPPEPRGALEAHLAVCAPCRSVLQDLKT
                     IVAAAPRYTGSVPGQDLWPAIRRAIDAGREVELRPRQPPAQRLFTLRQLVAASIVFAM
                     VTGGAVYYTVGRAGPPAAPMLVQQAPVVPGPTGLPVSARAGAAFDLAVGELEQVLAQG
                     RSRLEPKTLKIIEDNLQVIDRA"
     gene            complement(624..1166)
                     /locus_tag="VGA78_06140"
     CDS             complement(624..1166)
                     /locus_tag="VGA78_06140"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9893482.1"
                     /translation="MTAVATAMPNAEQTDVALAARGDSAAFERLYRVHLARVTSLARW
                     LLGQDEVDDAVQEVFIRVWEKLGTFSGQSAFGTWLHRVAVNHLLRRRQRRALHWSRHT
                     ADDEALGGVAGPVSRPDLKVALEASVGRLPAGAREVFVLHDMEGYTHEEIGRSLDIDA
                     GTSRSQLHRARMLLRGMLAR"
     gene            1359..2180
                     /locus_tag="VGA78_06145"
     CDS             1359..2180
                     /locus_tag="VGA78_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX9893483.1"
                     /translation="MLLLLAGTGVSVAWFIRAVGEGNTFGLAGSMILFTGLSICFAGF
                     TIVNPNEARVLILFGRYAGSIREDGFWWVNPFTIKKRVSLRVRNFETSKLKVNDHHSN
                     PIEIGAVVVWRVVDSAEALFEVDDYENYVHVQSEAAVRTLASRYPYDAHNTEEMALSS
                     HQTEVARDLLGEVQERLGKAGVQVTEARISHLAYAPEIASAMLQRQQASAIIAARFKI
                     VEGAVGMVENALEMLSARNVIHLDEERKATMVSNLLVVLCSERGSTPVINAGSIY"
     gene            2184..2369
                     /locus_tag="VGA78_06150"
     CDS             2184..2369
                     /locus_tag="VGA78_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEX9893484.1"
                     /translation="MAERKSFLLRLDPLIHESLQRWANDDLRSLNAQIEYLLRRALVQ
                     SGRLHRPGNHEGDGENV"
     gene            2362..3972
                     /locus_tag="VGA78_06155"
     CDS             2362..3972
                     /locus_tag="VGA78_06155"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9893485.1"
                     /translation="MCESTSVGRSVRRSVLFLAALGLAAEGVAAQDDMLVVTRGTDTI
                     AVERVRRTGLRMDGELLIPQARARFNYSVVIGPGALVTQLENEFRRADADVKSPPAQA
                     ASLQFVGDSVFVEIRNPGAAARTQRIKTREGALPYINPSFALLEPMLLRMRTLGKDSL
                     QIPVFFVAGGQTVDVTIKYRGPDSVVVSFAPGNDSYLKVDRQNRILGGTVPSQGLSIT
                     RSRATGQALFMPKPDYSAPAGAPYTAVDVTIPTPMGHTLAGTLTLPSGKGPFPALVTI
                     TGSGSQDRDEDIAIVKGYRPFRQIADTLARAGIAVLRMDDRGFGGSGGDVMTSTSADF
                     ADDIKAGLAWLRQRPEIEGRRLGLVGHSEGGLIAPMIAAEDPTLAAIVIMAGPAQTGR
                     QILTFQNRYAIERAPTIRPEARDSALGAALKGIDSVAGTSPWIRFFLDYDPLATAARV
                     KVPTLILQGATDQQVTAEQAEALGQAIRSGGNGEVMVKVFPNANHLFVEDPSGNPGGY
                     ATLPTGQVRGDVIETLVSWLRGRLYPTR"
BASE COUNT          705 a         1367 c         1337 g          673 t
ORIGIN      
        1 ggcccggtcg atcacctgca gattgtcttc gatgatcttg agggtcttgg gctcgagccg
       61 gctgcgcccc tgggccagca cctgctccag ctcgccgacc gccaggtcga acgctgcgcc
      121 ggcccgggcc gacaccggca acccggtggg acccggcacc acgggggcct gttgcaccag
      181 catcggcgcc gcgggcggcc ccgctcggcc taccgtgtag tacaccgcgc cgccggtcac
      241 catggcaaat acgattgagg cggcaaccaa ttgccgcagg gtgaagagac gctgggcggg
      301 aggctgccgg ggccgaagct cgacctcccg accggcatcg atcgcccggc ggatcgccgg
      361 ccagagatcc tgtcctggca ccgagccggt gtaacggggt gcggcggcca caatggtctt
      421 gaggtcttgc agcaccgagc ggcagggagc gcacaccgcc agatgggcct cgagcgcgcc
      481 acgcggctcg ggcggcaact cgccgtcgag atacgcgctc agctgatcga tccattcagg
      541 atgcatgatc acccctcacc cttcccattc cctgttcacc gttccctgtt caccgttcct
      601 gtccaccgtt ccctgtgtac cgctcaccgg gccagcattc ctcgcaacag catgcgggcc
      661 cggtgcagtt gagagcgcga ggtgccggcg tcgatgtcga gcgaccgccc gatctcctcg
      721 tgagtgtacc cttccatgtc atgcagcacg aacacctccc gtgcccccgc cggcagccgt
      781 cctaccgacg cctccagcgc gaccttgaga tccggccgcg acaccggccc ggcgacccca
      841 cccagagcct catcatccgc ggtgtggcgc gaccagtgga gcgcccgccg ctgccgtcgc
      901 ctgagcaggt gattgactgc cacccgatgc agccaggtgc cgaaggccga ctgacccgaa
      961 aaggtgccga gcttctccca cacccggatg aacacctcct gcaccgcgtc atccacctcg
     1021 tcctggccga gcagccaccg cgccagcgag gtgacgcggg cgaggtgcac ccgatacagc
     1081 cgctcgaacg ccgcgctatc tcctcgggcg gccagcgcga cgtcggtttg ttcggcattc
     1141 ggcatcgcgg tggccacggc cgtcatcggc gacttcccct cacccggcag cgttgaaccg
     1201 actgattgga tacccttgcc cgacaaggcg ttggaatcct cggtcacagg gacgccttga
     1261 cctggtaata tcgatgtgat atcatatcga taccacttct tcggcaagga cctatgataa
     1321 aggaaacggc gcggcggggt gcccctgggc tcgtcacgtt gctcctcctc ctggcgggca
     1381 ccggcgtgag cgtggcgtgg ttcatccggg cagtagggga gggtaacacc ttcggcctgg
     1441 ccgggtcgat gatcctgttc accgggctct cgatctgctt cgccgggttc accatcgtga
     1501 acccgaacga ggcccgggtc ctgatcctgt tcggccggta cgccgggtcg atccgggaag
     1561 acggcttctg gtgggtgaac ccattcacca tcaagaagcg agtgtcgctc cgggtacgga
     1621 acttcgagac cagcaagctc aaggtgaacg accaccactc caatccgatc gagatcgggg
     1681 cggtggtggt ctggcgggtg gtggactcgg ccgaggcgct gttcgaggtg gacgactacg
     1741 agaactacgt gcatgtccag agcgaggcgg cggtccgcac cctggcatca cggtatccct
     1801 acgacgccca taataccgag gagatggcgc tctccagcca tcagacggaa gtcgctcgcg
     1861 atctcctggg cgaagtgcag gagcggctgg ggaaggcggg tgtgcaggtg accgaagccc
     1921 ggatcagcca tctggcctat gccccggaga ttgcctccgc catgctgcag cggcagcagg
     1981 ccagcgccat catcgccgcc cgtttcaaga tcgtcgaggg cgcggtcggc atggtggaga
     2041 atgcgctcga gatgttgtcg gcgcgcaacg tcatccacct ggatgaagaa cggaaggcca
     2101 cgatggtgag caatctgctc gtggtgctgt gcagcgaacg gggatcgacc ccggtgatca
     2161 acgccggatc catttactag tcaatggccg agcggaagtc gttcctgctg cgactggatc
     2221 ctctgatcca tgagtcgctc caacgctggg cgaacgacga cctgcgcagc ctgaacgccc
     2281 aaatcgaata cctgctccgg cgggcgctgg tccagagtgg acggctccac cgcccgggaa
     2341 accacgaagg agatggcgag aatgtgtgaa agcacgtccg tcggtcggtc ggtccgtcgg
     2401 tccgtcctgt tccttgctgc cctgggactc gctgccgaag gcgtggccgc ccaggacgac
     2461 atgctggtgg tgacccgcgg caccgacacc attgcggttg agcgggtccg ccgcaccggc
     2521 cttcgcatgg acggggaact gctgatcccc caggccaggg cccgattcaa ctacagcgtc
     2581 gtgatcgggc ccggagcgct cgtgacccag ttggagaacg agttccggag ggctgatgcc
     2641 gacgtcaaat cgccgccggc ccaggcggcg agcctgcaat tcgtggggga cagcgttttc
     2701 gtcgagatca gaaacccggg cgcggcggcc agaacgcaac ggatcaagac ccgtgagggc
     2761 gctttgccct acatcaatcc gtcgttcgcg ctgctcgagc cgatgctact gcggatgcgg
     2821 accctgggaa aggattcgct ccagatcccg gtgttcttcg tggcgggagg acaaacggtc
     2881 gacgtaacca tcaagtaccg cgggccggac tcggtggtgg tgagcttcgc tcccgggaat
     2941 gactcgtact tgaaggtcga tcgtcagaac cggatcctgg gtggaaccgt ccccagtcag
     3001 ggcctgtcga tcacgcggtc ccgcgccacc ggtcaggcgc tcttcatgcc caaacccgac
     3061 tactcggctc cagccggggc accgtacacc gcagtcgacg tcaccattcc gacccccatg
     3121 ggtcacacgc tggcgggcac cctcacgctg ccgtccggca agggtccctt ccccgccctg
     3181 gtgacgatca ccggctcggg aagccaggac cgggacgaag acatcgcgat cgtgaagggc
     3241 taccggccgt tccgccagat cgcggacacg ctggcgcggg ccggtatcgc ggtgctgcgg
     3301 atggacgatc ggggctttgg aggctcggga ggcgatgtca tgacctccac cagtgccgac
     3361 ttcgcggatg acatcaaagc gggtctggcc tggctcagac agcggccgga gatcgagggc
     3421 cggcggctgg gcctggtggg ccacagtgaa ggtggtctca ttgcgccgat gatcgcggcg
     3481 gaggacccca ccctggccgc catcgtgatc atggccgggc cggcgcagac cggccgccag
     3541 attctcacat ttcagaaccg ctacgccatc gagcgcgctc ccaccatccg gccggaggca
     3601 cgcgactcgg cgctgggtgc ggcactgaag ggcatcgatt cagtggcggg caccagcccg
     3661 tggatccggt tcttcctcga ctacgacccc ctggcgaccg ccgcccgggt gaaggtgccg
     3721 accctgattc tgcagggtgc caccgatcaa caggtgacag cggaacaggc cgaagccctg
     3781 ggccaggcca ttcgctcggg tgggaacggc gaggtgatgg tcaaggtgtt ccccaatgcc
     3841 aaccacctgt tcgtggagga cccgtccggc aaccctggcg ggtatgccac cctcccgacc
     3901 ggccaggtcc ggggtgacgt gatcgagaca ctggtgagct ggctgcgagg gcggctctac
     3961 ccaactcggt aggaaggtgc gacattctcg gggagagggt cacccgccag tgcgaagcct
     4021 cattcccctt ctggttcttg cggccgccgt gccgagctcg ctccatgccc aggacgacag
     4081 cg
//
LOCUS       DASWKS010000206         6472 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1959946, whole genome shotgun sequence.
ACCESSION   DASWKS010000206 DASWKS010000000
VERSION     DASWKS010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1959946"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VGA78_06160"
     CDS             complement(<1..1204)
                     /locus_tag="VGA78_06160"
                     /inference="COORDINATES: protein motif:HMM:NF019307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893486.1"
                     /translation="MRIRTLLLPAALFWNAFPAAAQTSDQIRTGLRQYREANEAVILG
                     ELRELLAIPNLADDAPNIRRNADLLIRMLTRRSVNARLLELEGSPPAVFGELLTPGAA
                     RTIVLYAHYDGQPVDSARWASRPWTPVLRSAALPQGGQDIPFPAAGERVDPEARIYAR
                     SASDDKSPIIAMLAALDGLRAAQIPLSVNLKFFFEGEEEAGSDHLREMLTRHAGLLRA
                     DAWFFMDGPVHQSRRQQIVFGVRGVMGVNLTVYGPTRPLHSGHYGNWAPNPNVLLAHL
                     IASLRDPDGRVLIPEFYDDARQPSAAERAAFATAPLLDAQLRRELGLARTEAENALLV
                     ERLMLPALNVGGLAGGRTGAGGANLIGTESSAYIDFRLVPNQTPGRVREQLTAHLRTQ
                     GWHVVQQPP"
     gene            1303..2766
                     /locus_tag="VGA78_06165"
     CDS             1303..2766
                     /locus_tag="VGA78_06165"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX9893487.1"
                     /translation="MSSTVTGRETLTLDPTDWAPVRALAHQMLDDMIDQLESIGEIPA
                     WRETPPEIAAAIAEPVPVKPQGLDRAYRDFRRVVLPYSTFNIHPRFWGWVMGTGSIEG
                     MLAELLSAGLNLNAGGANVSGSLVELQVLQWCKSLMGFPASAGAVLVTGGSTANLVAL
                     AAARDASLGSLADAGVQVSGRHLVFYGSEETHNSVPKALRLLGMGQSGWRAVPTDAEF
                     RIDVAQLERMIAEDRAAGYRPACVIGNAGTVNTGALDDLSALLAICRREGLWFHVDGA
                     FGAIAALSPSLSSLVRGMEQADSLAFDLHKWLHIPYDAGCVLVRDREAHRRPFLQHGS
                     YLTKMERGPGAMPVLFSDFGPELSRSFRGLKVWLAFKAHGTAIYGRLAEENVAQARYL
                     AERVTAEPELELLAPVPLNIVCFRYRGLGGVPDDILNERNRQLLMRLQTDGIAVPSHT
                     VLQGRFAIRVAITNHRSRRSDFDALVEAVLRIGKALQ"
     gene            2780..3970
                     /locus_tag="VGA78_06170"
     CDS             2780..3970
                     /locus_tag="VGA78_06170"
                     /inference="COORDINATES: protein motif:HMM:NF028240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HEX9893488.1"
                     /translation="MLRCFTLVFALLAACPSARLTAQEPRWYERLRFDGDFRLRHETF
                     FQSDTGTRGRLRIRLRAGFTLPLTSTLTTGFRLASAEPGSVTSHNVTLTGALTPKNLF
                     IDRAFLAWTPNSWLSITGGKFGLPLQRPAGLMRSELVFDDEVAPEGIHEQITLVSSRS
                     GTVRRLMLLGEQWSLAEVPGETDAWMLGGQAVLDLALGGRATATLTGGFFGFLHQEML
                     ARARNNNSALLVTNGVVLADGTILEGGQPLVPPSGNPFLAFVSDFKLVNGSIGISVDS
                     VFRRMPLQLYLDLVHNSGAEVERNGLWSGLTVGALRRPGDWSASVLYTRVERESVVSM
                     YSYSDLGLGGTNVEGPVWTAQYRMAGPLTLSYRHHYTRPLIPVPALPDRRLHRILLDA
                     GVSF"
     gene            3980..4375
                     /locus_tag="VGA78_06175"
     CDS             3980..4375
                     /locus_tag="VGA78_06175"
                     /inference="COORDINATES: protein motif:HMM:NF017007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEX9893489.1"
                     /translation="MAPPSDKSRGIAFILALVLGVFGAHRFYVGKTGTGLLMICTFGG
                     MGIWYLYDVIMVASGQFRDSDGRRVMRWDPETGEEGLVHGELTGEILEELEALRREVS
                     ELSERVDFAERLLQRPQGDRVATPGPERS"
     gene            4423..6363
                     /locus_tag="VGA78_06180"
     CDS             4423..6363
                     /locus_tag="VGA78_06180"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX9893490.1"
                     /translation="MRPMLVLALGATLTIPVVAQPPPPRPRPYPVFESSSFQRAVERG
                     TRTRTGRPGPRYWQQHAEYRLTAILDPAAKRLSGEGTVRYHNRSPDTLRTVIFHLHQD
                     LFAPNAIRNTPTPVTGGMELGSLTVNGHELRAVQSDTGAGFERYGTGLYVRLPAPVVP
                     GGSVEFGFSWGFTVPPDGAPREGTDGEVFFIAYWYPQLAVYDDISGWQDDPYQGTAEF
                     YMGYADYDVALTVPEGWLIGATGTLQNPEQVLSPPARERLRRAADTRDVVHVVGEADR
                     GPGRATARDSAGLTWRYRATAVRDFAFGVSDQYLWDATTATVGDQNGDGKADRTLIHT
                     FYRPSRRAWAWEQSARYAQHSIEFLSTYLWPYPYPHATAVDGVVSCSGMEYPMITCIG
                     GQRDTLALYSVIVHELGHMWFPMQVGSDEKRSAWQDEGLTRFNQAQGMREFFRGYDRE
                     AIARENYLRLARAGGEVELVRHGDLYPFDSPAYGIASYDKMATNLMALRGLVGDRRFR
                     EAYREYGKRWINRHPSPWDFWNSFNELLGQDLSWFWRTWWFETWTLDQAIAEVTPAGD
                     STRITIEDRGLAPMPARIVVRRGDGTSQRFEIPVTTWLAGERRWTFQVRTAPTIASIE
                     IDPERVFPDLDRSNNLWRAIGR"
BASE COUNT         1004 a         2127 c         2236 g         1105 t
ORIGIN      
        1 cgggcggctg ctgcactacg tgccagccct gggtccgcag gtgggcggtg agctgttcac
       61 gcacccggcc gggcgtctgg ttaggcacca ggcggaaatc gatataggcg ctcgactcgg
      121 tcccgatcaa gttggctccg ccggcgccgg tgcggcctcc cgccagccct ccgacgttga
      181 gcgccggcag catcagccgt tccaccagca gggcgttttc ggcctcggtc cgcgccaggc
      241 ccagctcccg acgcagctgg gcgtccagca gcggagccgt ggcgaaggcg gcccgttccg
      301 cggccgaggg ttgacgcgcg tcgtcgtaga attcggggat cagaacccgg ccgtcggggt
      361 cgcgcaacga agcgatgaga tgggccagca gcacgttggg gttgggggcc cagttgccgt
      421 agtgacccga gtgcaacggc cgggtgggac cgtacacggt gaggttcacg cccatcacgc
      481 cacggacccc gaagacgatc tgctgccggc gcgactggtg caccggacca tccatgaaga
      541 accaggcatc cgcccgcagc agcccggcgt gacgagtcag catctcgcgc aggtgatcgg
      601 agcccgcctc ttcctcgcct tcgaagaaga acttgaggtt caccgacagc gggatctggg
      661 cggcccgcag cccatcgagc gccgccagca tcgcgatgat gggtgacttg tcatcgctgg
      721 ccgaccgggc gtagatccgt gcctccgggt cgacccgctc gccggccgca gggaagggaa
      781 tgtcctggcc gccctgtggc agcgcggcgg aacggagcac gggtgtccag ggccgggagg
      841 cccaccgggc cgagtcgacc ggctggccgt cgtagtgggc gtagagcaca atggtccgcg
      901 ccgcccccgg tgtcagcagc tcgccgaaca ccgccggggg tgacccctcc agctccagca
      961 agcgggcgtt gacgctccgg cgggtaagca tccggatcag gaggtccgcg ttgcgccgga
     1021 tgttaggcgc gtcgtcggcc aggttgggaa tcgcgagcag ttcccgcagc tcgcccagaa
     1081 tgaccgcctc gttggcctcc cggtattggc ggaggccggt gcggatctgg tcggacgtct
     1141 gagcggcagc ggggaaggcg ttccagaaga gggcggcggg gagcagcagg gttcggattc
     1201 gcatcctcaa cccatacgcc gctgtccgcc tggccgccag tccggcccga tagcctctgc
     1261 cgaccggtgc gactaagatg ggggccgacc ccggagatat cgatgtcctc caccgtgacc
     1321 ggccgcgaga ctctgacgct ggatcccacc gactgggctc cggtgcgggc actggcccac
     1381 cagatgctcg acgacatgat cgaccagctc gagagcatcg gggagatacc ggcctggcgg
     1441 gagacgccac ccgagatcgc ggccgcgatc gccgagccgg ttccggtgaa gccgcaggga
     1501 ctggaccggg cgtaccggga cttccgtcgg gtggtgcttc cttattcgac ctttaacatc
     1561 cacccccgct tctggggctg ggtgatgggc accgggtcca ttgagggcat gctggcggaa
     1621 ctgctgtcgg ccgggctcaa cctgaacgcc ggcggtgcca acgtttccgg ttccctggtg
     1681 gagcttcagg tgctgcagtg gtgcaagtcg ctcatgggat tccccgcctc ggccggtgcg
     1741 gtgctggtga ccggcggctc caccgccaac ctggttgccc tggccgcggc tcgcgacgcc
     1801 agtctgggca gcttggcgga cgccggagtc caggtgagcg gccggcacct ggtgttctac
     1861 ggctcggagg agacccacaa ctcggtcccg aaggcacttc ggctgctggg aatggggcag
     1921 tcggggtggc gtgcggttcc taccgacgcc gagttccgca tcgacgtcgc tcagctggaa
     1981 cggatgatcg cggaggatcg ggccgcgggt taccggccgg cctgtgtgat cggcaacgcg
     2041 ggcaccgtga ataccggggc gctggacgat ctctccgccc tcctggcgat ctgccggcgg
     2101 gaagggctct ggtttcacgt ggacggcgcc ttcggcgcga tcgcggcgct ctcgccctcg
     2161 ctctcgtccc tggttcgcgg gatggagcag gccgattccc tggccttcga tctccataaa
     2221 tggctccaca ttccctatga tgccggctgc gtcctggtgc gcgatcgtga agcgcaccgg
     2281 cgtcccttcc tgcagcacgg cagctacctc accaagatgg agcgcggtcc cggggccatg
     2341 ccggtgctgt tctcggattt cgggccggag ctttcgcgct ccttccgcgg ccttaaggtg
     2401 tggttggcct tcaaggcgca cggcaccgcg atctacggcc gcctggccga agagaacgtg
     2461 gcccaggcac ggtatctcgc cgagcgagtg acggccgagc cggagctgga attgctggcg
     2521 ccggtacctc tgaacattgt gtgcttccgc taccgcggct tgggcggcgt cccggacgac
     2581 attctcaacg agcgcaaccg gcagctcctg atgcggctcc agaccgacgg catcgcggtg
     2641 ccctcccaca cggtgctgca gggccgcttc gcgatccggg tggccatcac caatcaccgg
     2701 agcaggcggt cggacttcga cgcgctggtg gaggcggtgt tgcggatagg caaggcactc
     2761 cagtaacccc gaggcccgaa tgctgcgctg tttcactctg gtattcgccc tgctggccgc
     2821 ctgcccgtcc gcccgcctga cggctcagga gcccaggtgg tacgaacgcc tgcgcttcga
     2881 cggcgatttc cggctgcgtc acgagacgtt ttttcagagt gacaccggca cccgggggcg
     2941 actccggatt cggctccggg ccggattcac gctgccgctc accagcacgc tgacgaccgg
     3001 gttccgtctc gcctcggccg agccgggcag tgtgacatcg cacaacgtga cgctgaccgg
     3061 cgccctgacc cccaagaatc tcttcatcga ccgggccttt ctggcctgga ccccgaactc
     3121 ctggttgagt atcaccggcg gcaaattcgg tctcccgttg cagcgtccgg ccgggttgat
     3181 gcgctccgag ctcgttttcg acgacgaggt cgcgcccgag ggaattcacg agcagatcac
     3241 gctggtgtcc agccggtccg gaacggtccg ccggctgatg ctgctgggtg aacaatggag
     3301 tctggccgaa gttcccgggg aaaccgatgc ctggatgctg ggcggacagg cggtgctcga
     3361 tctggcgctg ggcgggcgag ccacggccac gctgaccggc ggcttcttcg gctttctgca
     3421 ccaggaaatg ttggcccggg cccggaacaa caactccgct ctgctggtga ccaacggcgt
     3481 ggtgctggcc gacgggacca tcctggaggg tggccagccg ctggtccctc ccagcgggaa
     3541 ccccttcctc gccttcgtca gcgatttcaa gttggtcaac ggttcgatcg gcatctcggt
     3601 ggattcggtg ttcaggcgaa tgccgctgca gctctacctg gacctggtcc ataacagcgg
     3661 cgccgaggtg gagcgaaatg gcctctggag cggcctgacc gtgggcgcgt tacgacggcc
     3721 gggcgactgg tcggccagcg tgctctacac ccgggtcgaa cgagagtcgg tggtgtcgat
     3781 gtacagttat tccgatctgg ggctcggcgg caccaacgtc gagggtcccg tctggaccgc
     3841 tcagtatcgg atggcgggtc cgctgacatt atcgtacagg catcactaca cccgaccgct
     3901 gatcccggtg ccggctctgc cggaccgacg gctgcaccgg attctgctgg atgccggggt
     3961 gtccttctga ggtgttccca tggctcctcc ttctgacaaa tcccggggaa tcgccttcat
     4021 cctggcgctg gtcctgggag tattcggcgc ccatcggttt tatgtcggca agaccggcac
     4081 cggtctgttg atgatctgca ccttcggggg aatggggatc tggtatctgt acgacgtcat
     4141 catggtggcg tcgggccagt tccgggattc cgacggacgg cgggtgatgc ggtgggatcc
     4201 tgaaaccggt gaagagggtc tggtccacgg cgagttgacc ggggagatcc tggaagagct
     4261 ggaggcgctc cggcgggagg tttcggagct ctcggaacgg gtagacttcg ccgagcggct
     4321 gctgcagcgg ccccagggtg accgggtggc aacccccgga ccggagcgct cgtagggtca
     4381 gtggttggct cccctaccac cgattccgga atccaggtcc tcatgcgccc gatgctggtc
     4441 ctggcccttg gggccactct caccatcccg gtggtcgcgc aaccgccacc gcctcggccc
     4501 cggccctatc cggtgttcga gagcagcagc ttccagcgcg cggtggagcg gggcactcgg
     4561 acccggaccg gccggccggg accgcgctac tggcagcagc acgccgaata ccggctgacc
     4621 gcgatcctgg atcccgccgc caaacggctt tcgggcgagg gcacggtccg ctaccacaac
     4681 cgttctcccg acacgcttcg caccgtcatt ttccatctcc accaggatct cttcgccccg
     4741 aacgcgattc ggaacacccc gaccccggtc accggcggga tggagctggg cagcctgacg
     4801 gtgaatggtc atgagctgcg ggcggtccag agcgacacgg gggcaggctt cgagcgctac
     4861 ggcaccgggc tgtacgttcg cctgcccgcg ccggtggttc cggggggatc ggtggagttc
     4921 ggattcagct ggggattcac cgtgccgccc gacggcgccc cccgggaggg gaccgacggc
     4981 gaagtgttct tcatcgcgta ctggtatccg cagctggcgg tctacgacga catctccggt
     5041 tggcaggatg acccgtacca gggcaccgcg gagttctaca tgggctacgc cgactacgac
     5101 gtggccctga cggtaccgga aggctggctc atcggcgcca ccggcacgct gcagaatccc
     5161 gagcaggtgc tgtcgccgcc ggcgcgagaa cgactccgcc gggcagcaga cacccgcgac
     5221 gtggtgcacg tggtgggtga ggccgaccgg ggaccgggcc gcgccaccgc gcgcgacagc
     5281 gccgggctca cctggcgcta ccgggcgacg gcggtccgcg atttcgcgtt cggtgtctcg
     5341 gatcagtatc tgtgggacgc cacgaccgcg accgtgggcg accagaacgg cgacggcaag
     5401 gccgatcgca ccctgatcca caccttctac cgtcccagcc ggcgggcctg ggcttgggag
     5461 cagtcggccc gatacgccca gcacagcatc gagttcctgt cgacctatct gtggccctat
     5521 ccctatcctc acgccacggc ggtggacggg gtggtgtcct gctccggcat ggaatacccg
     5581 atgatcacct gcatcggcgg ccagcgggac acgctcgcgc tctactcggt gatcgtgcac
     5641 gagctggggc acatgtggtt cccgatgcag gtagggtcgg acgagaaacg ctccgcctgg
     5701 caggacgaag gactgacccg gttcaatcaa gcgcagggca tgcgggagtt cttccgcggc
     5761 tacgaccgtg aagccatcgc ccgcgagaac tatctgcggc tggcccgggc cggcggcgaa
     5821 gtggagttgg tgcggcacgg cgatctgtat ccgtttgaca gtccggcata cggcatcgct
     5881 tcctacgaca agatggccac caacctgatg gcgctgcggg gtctggtggg cgaccggcgc
     5941 ttccgggaag cctaccggga gtacggcaag cggtggatca atcgccaccc ctcaccgtgg
     6001 gacttctgga acagcttcaa cgaactgctg ggtcaggacc tgtcgtggtt ctggcgcacc
     6061 tggtggttcg agacctggac cctcgatcag gcgatcgccg aggtgacccc tgccggcgac
     6121 tccactcgga tcaccatcga agaccggggc ctggctccga tgccggcccg gatcgtggtg
     6181 cgccggggcg acggtacttc ccagcggttc gagattccgg tcaccacctg gctggcgggc
     6241 gagcggcgct ggaccttcca ggtgcgcacc gcgcccacca tcgccagcat cgagatcgat
     6301 ccggagcggg tatttcccga tctcgaccgg tccaacaacc tgtggcgggc gatcggacgc
     6361 tgaaaaagcg gtcgaccggg gtcaaagggg tcaaaggagt cgaaggagtc gaagggggtt
     6421 cgcaccattg tcatcctgag cgcagcgaag gatctcatgc ccgtattcca tg
//
LOCUS       DASWKS010000207         1527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2329651, whole genome shotgun sequence.
ACCESSION   DASWKS010000207 DASWKS010000000
VERSION     DASWKS010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2329651"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VGA78_06185"
     CDS             complement(<1..845)
                     /locus_tag="VGA78_06185"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX9893491.1"
                     /translation="MLFDVSDLTPTSVPADLCIVGAGPAGLVVAAALRDSGRRIVVLE
                     SGGATAEPFAQGLNQGRVVGASYAGLTSTRQRQVGGTARLWNTPVTDGAGAKYVPLEP
                     HDFEPLPSVPWSGWPFGARELAPYYLRAQEVCGLGPFQYEGTRWGRPDRSPLHAGSTP
                     LLTGVYQFGSARRFIDRMVEDLVAAENVTIYCGATVVTLLTSDQSGGQVTGLVAVTRE
                     GTPINVQPRWVVLAGGAIENARLLLLARDRQAGMDPGDWLGRCFMEHPRDFSTSLFFP
                     GSDKIG"
BASE COUNT          266 a          503 c          510 g          248 t
ORIGIN      
        1 ccgatcttat ccgatcccgg gaagaacaag ctggtgctga agtcgcgcgg atgctccatg
       61 aagcagcgtc ccagccagtc tcccggatcc attcctgcct gccggtcgcg agccagcagc
      121 agcagccggg cgttctcgat cgccccaccg gccaggacca cccatctcgg ctggacattg
      181 atgggggtgc cttccctggt gacggcaacg agaccagtta cctgacctcc ggactggtct
      241 gaagtgagga gagtcaccac cgtcgcgccg caatagatgg tcacgttctc tgcggcaacc
      301 aggtcctcga ccattcgatc gatgaaacgg cgggcgctcc cgaactgata gacgccggtc
      361 agcagcgggg tcgacccggc atgcagaggg gagcggtccg gcctgcccca gcgggtgcct
      421 tcgtactgga agggacccaa gccgcaaacc tcctgcgccc gcaggtagta cggcgccagc
      481 tccctcgccc cgaagggcca cccgctccac ggcacggatg gcaacggttc gaagtcgtgc
      541 ggctcgaggg ggacatactt ggcccccgct ccatccgtca ccggagtgtt ccagagccgg
      601 gcggtccctc ctacctgtcg ctgtcgggtc gaagtcagcc cggcgtagga ggcgcccact
      661 acccgaccct ggttgagtcc ctgtgcgaac ggttcggcgg tggccccgcc gctctccagc
      721 acgacgatcc gccgaccgga gtcgcggagg gccgcggcca caaccaggcc ggccggtccg
      781 gcgccgacga tgcagagatc ggctggaacg ctggtcgggg tcaggtcact cacgtcgaac
      841 aacatggccc aggattgtac cagacccgcg ctgatacaac catcgaggta agccgcatca
      901 gccggccggc gcactaccct gctgaaacct ggagcgcccc attggtatgg gcatgtgacc
      961 cgtgttggaa gacaccctta gacgtctcca taacgatgca gagttggtca gcaggaatga
     1021 ggatggtatg ctcgcgggga cccgtgttgg taaccgtctt gttcagcacc aggaaccggg
     1081 cgattcggct gggaatgacg ctcgagggtt tgtcccacat ccgggtgcct cgagacgtca
     1141 cctgggaaat cgtagtgacg aacaacgggt cgaccgatcg gaccgatgcg gtgttaggcg
     1201 atcgggcgaa gcggcttccc ctccgctcgg tgtgggtgcg gtcgcccgag aactccgccg
     1261 gggtgagtat ttcatcgggc ccaactgggc ttgcgccgtc cagccggtgc gggcggcccg
     1321 gggattcgac gtccggatgg gcctgggagc ggtcggccgt ccccgggcgg cctttcgcct
     1381 acgggtccga gcggaccagg cgccggccag ccggggacgg cctatcgagt ctccgccctg
     1441 agcgccagcc tggtcccgga cccggtagct tcgaagtggc gagataccgg ttccggagcc
     1501 gagatgaccg actgggtaat ccaggta
//
LOCUS       DASWKS010000208         7254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_94937, whole genome shotgun sequence.
ACCESSION   DASWKS010000208 DASWKS010000000
VERSION     DASWKS010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94937"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="VGA78_06190"
     CDS             complement(<1..934)
                     /locus_tag="VGA78_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893492.1"
                     /translation="MTSSSVPVPGAGHRFALALLLLAACHAAGGVGLQPPSPLWGGLE
                     SGRYRVGLSLLFERDTTRPALGPDSAPPPGRPMQIVVWYPAGAAGDRPVTLRQYIELS
                     AGALGPDSATAERRRRLVEGFASEPRSNGIAQSAVDSLLGTPMGAVVDAPPAGGRFPL
                     LVFLHASPWGASVMSEYLASHGFVVAAIESKGAREAPYRLSRANLDAMVRDAGFTVTR
                     MRREPFVGELLGIIGMSNGAIAAVALQLGGIVPQAVVSLDGGIGEQAGGSYLGSVSGA
                     VATRFTVPLLHLYTPDNRYLDFQYLRSYQAAPRTM"
     gene            complement(1049..3742)
                     /locus_tag="VGA78_06195"
     CDS             complement(1049..3742)
                     /locus_tag="VGA78_06195"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893493.1"
                     /translation="MVRGERFYRLLLRLFPGAFRRRYAAEMIDFYRARRAAVRGKAVA
                     GLWLRIVMDVIGSATLEHADTARFNPSNRVRRTGREATMDTLKQDLRLALRGLGRAPG
                     FTAVVLITLALGIGANAAIFSVVHAVLLKPLPYQHADRIEMLWHSNRTGRTYNAISPP
                     EYFDFKEQLRAFDAVVAIRGQSSTILGDGGEPERLSAYVVTPNLFEALGATPAMGRSF
                     RPDDGAAGAEKVIIISDGLWRRRFGADPKILGRTVNIGGFIRTIVGVMPREVGFPDAP
                     LGFLRNRGDFWIPSDYESARATGRGNQYIAAIARRRADVTEAAARADLELVSARLRAA
                     FPDRYGEPAVMGWRMTTVPLRDQMVGSVRTALWVLAGAVGLVLLIACVNVANLLLARG
                     ALRQRDVAVRLALGANRGRLLRQTLTESTLLSLGGGLLGVLLARVGVPLLLHLDRGNI
                     PRIDGTRLSGTVLGFAFGISLLTGLIVGVVPALQQSRTDLRGALGEGSRGAGDGMRRR
                     RLRSALVAAQVAMALVVLVAAGLLGRSFAFLQRVEPGFSPGGVVSLTLNLPRTKYDSA
                     AKVTAFFDQVTPALAAIPGVVEVGGIYPLPLSGEGWSGSFEVEGLTTGPGDAEPHAEY
                     SVALPGYFHTMGIPLRAGREFAPTDTRGAPRVAVVDERLAARYWPGESAVGKRINAGE
                     AAGNWATVVGVVGHVHRSGPTQESEPQLYVPFAQHVETTVSLVLRTNGDPGALAGPIR
                     GVVRTHDPDLPTAQLQTLNELVTNATARQRFNMLMLTVFALVALGLASVGLYGVMSYL
                     VSQRNREIGIRIALGGQPADVRRLVLRESLWISVGGLVAGAAASLALSRLLTGLLYGI
                     KPIDVPTYAGIGALLLTVAALASYGPARRATRVDPLVALRE"
     gene            complement(3745..4113)
                     /locus_tag="VGA78_06200"
     CDS             complement(3745..4113)
                     /locus_tag="VGA78_06200"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893494.1"
                     /translation="MAPDRPGSSPDTLLPLKPVETLILMMLAGQDRHGYGLRQDILEY
                     TAGRIALEAGNLYRHIRRLEGSGCLTESGRRPARADDERRIYYRLTPFGRRVLAAEML
                     RLRSLVRLAEERRIITPVRA"
     gene            complement(4218..5132)
                     /locus_tag="VGA78_06205"
     CDS             complement(4218..5132)
                     /locus_tag="VGA78_06205"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HEX9893495.1"
                     /translation="MDHRILRAASFLIVMIAWPGRGEAQPGAPAENRPLAEVSFTLHQ
                     NGIILPAVINGRDTVRLLLDTGWGPLALVAGSAERLGLPLDPPGADGLGRAQVASLAI
                     GDVVQHRPFVEVFPTQALVPLIGPHDGVLSTAFFRDLVLQVDYPSKVVRFYRSSPIGS
                     TPSTGSRVSVPMVFSPRAGALPFTDSVFVDGRPVRGLFDTGGAGAFIATRRLVERAGL
                     RPVPDSGRATIGLMSGDTAARQVVRFTRVGRVTLGPFAVDSPRVMIAPPLLSGEDWGH
                     DLIIGYGFMRHYVVTFDYPGRLVTFARP"
     gene            complement(5176..5658)
                     /locus_tag="VGA78_06210"
     CDS             complement(5176..5658)
                     /locus_tag="VGA78_06210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893496.1"
                     /translation="MRIPLLVVALFWPLSLVLAQDTEPLTPRTRLRVTLASTPARVQI
                     GSYQALTDTTLLLSAGSSRSLTIPLSSISRLEWSRGRRPGVLGGVLGLILGAGVGGVV
                     ACSLNRDDYGVFCGGQDDTKVVVGAALGGAAGTVIGALLFRRERWNQLDLVRLRSGRP
                     "
     gene            complement(6029..6196)
                     /locus_tag="VGA78_06215"
     CDS             complement(6029..6196)
                     /locus_tag="VGA78_06215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893497.1"
                     /translation="MIWSVFAPDGRYRGEVEFPPRFRPLDIGRDYVLGSWTDDVGAIH
                     VQLRDLWKGAA"
     gene            complement(6530..6880)
                     /locus_tag="VGA78_06220"
     CDS             complement(6530..6880)
                     /locus_tag="VGA78_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893498.1"
                     /translation="MGLGVLVLGVGGRVAMRLVAEATTGAGGFSLGGTLTVVFLGLVS
                     GAAGGLILLAARTLLRRWPPAPSLAFWLLLLAITLRGLRPLDNLRLILFLPLVAVFGG
                     LLQWRTWRYRRPVS"
     gene            complement(6937..>7254)
                     /locus_tag="VGA78_06225"
     CDS             complement(6937..>7254)
                     /locus_tag="VGA78_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893499.1"
                     /translation="PGVRFYLLQPPILLWQAIPYLLAGALWLPFRSPPGTTIGRRLAG
                     LLLLTAGLLHVPMLIGIFPLGGDMVGMVFVYATILTTLAIVVTTLIAYGVLYLGRRKR
                     AGT"
BASE COUNT         1342 a         2488 c         2464 g          960 t
ORIGIN      
        1 ccatggtccg aggagccgct tggtaggacc ggagatactg gaagtccaga taccggttgt
       61 ccggtgtgta caggtgaagg agcggaacgg tgaacctggt cgccacggca ccggagacgc
      121 tgcccaagta gctcccgccg gcctgttcgc cgattccccc gtcgagactc accacggcct
      181 ggggaacaat gcccccgagt tggagcgcca ccgcggcgat ggccccgttg ctcatgccga
      241 tgatgccgag cagctcgccg acgaacggtt cccggcgcat tcgggtcacc gtaaagccgg
      301 cgtcccgcac cattgcgtcg agattcgcgc ggctcaaccg gtagggcgct tcccgggcac
      361 ccttggattc gatcgcggcg acgacgaagc catggctggc caggtactcg ctcatcacgc
      421 tcgctcccca tggtgaggca tgcaggaaca cgaggagagg aaagcgcccg cccgccggcg
      481 gcgcatccac gaccgccccc attggcgtgc cgagcagcga gtccaccgcc gattgggcga
      541 tgccgttcga ccggggctcg gacgcgaagc cttcgaccag tcgacggcgg cgttccgcgg
      601 tggcggaatc cggtcccagc gcgccggcgc tcagttcgat gtactggcgc agcgtgaccg
      661 gccggtcgcc cgccgcgccc gcgggatacc agacgacgat ctgcatcggg cgtcccggcg
      721 gcggggccga gtcgggtccg agcgcaggcc gggtcgtgtc gcgttcgaag agaagtgaca
      781 ggccgacccg ataccggccg ctctccagcc cgccccagag aggcgaaggc ggttggaggc
      841 cgacccctcc cgcggcgtga caggcggcga ggaggagcag ggcgagggca aatcgatgcc
      901 cggcgcctgg cacgggaacg gatgaactgg tcaccggccc tcctcctact gcgaagccgt
      961 ctggtgcgcc gccgtgcctt ccagccaaca tagagcggcg cagcggacct cgccacgccg
     1021 gcctcgctcg accgcaggcg cgcggtggtt attcccgcaa cgcgaccagc gggtcgaccc
     1081 gggtggcgcg gcgagcgggg ccataggagg ccagcgccgc gacggtaagg agcagggcgc
     1141 cgatcccggc ataggtcggc acatcgatgg gcttgatccc gtacaggagt cccgtcaaca
     1201 gccgcgacag ggcgagcgaa gccgccgcgc ccgccacgag tcctcctacc gagatccaca
     1261 ggctctcccg cagcaccagc cggcggacat ccgcgggctg gccacccagc gcgatccgga
     1321 tgccgatttc ccgattccgc tgtgatacga ggtacgacat cactccgtag agccccacac
     1381 tggccaagcc gagcgctacc agcgcaaaga cggtaagcat gagcatgttg aagcgctggc
     1441 gggcggtggc gttcgtcacc agctcattca gggtctgaag ttgcgcggtg ggcaggtccg
     1501 ggtcgtgggt tcggaccact ccgcgaatgg ggccggccag cgcgccaggg tcgccattgg
     1561 tccgcagcac cagggaaacc gtcgtctcga catgctgcgc gaacgggaca tacagctgcg
     1621 gctcgctttc ctgggtcggg ccactccggt gcacatggcc caccactccg acgacggtcg
     1681 cccagttgcc cgccgcctcc cccgcgttga tccgtttgcc cacggcgctt tcgcccggcc
     1741 agtacctggc ggcaagccgc tcatcgacga ccgcaacccg gggcgcgccc cgggtatccg
     1801 tcggagcgaa ctccctgccc gcccggagcg ggatgcccat ggtgtggaaa taccccggca
     1861 gcgcgacgga gtattcggca tgcggctcgg catctcccgg accggtcgtc agtccttcca
     1921 cttcgaagga gccgctccag ccttcgccgc tcagcggcag gggatagatg ccgccgacct
     1981 cgaccacacc ggggatcgcc gcgagggccg gcgtcacctg gtcgaagaag gccgtgacct
     2041 tggccgcgct gtcgtatttg gtccggggaa gattcagggt gagcgacacg actccgccgg
     2101 ggctgaaccc aggctcgacc cgttgcagga aggcaaagct ccggcccagg agtcccgccg
     2161 ccacgaggac caccagcgcc atcgcgacct gagccgccac cagcgccgac cgcagccggc
     2221 gccgtctcat cccgtcgccg gcaccgcggg agccttcgcc cagcgctccg cgcaggtcgg
     2281 tgcgggactg ttgcagggcc ggcaccaccc cgactatgag cccggtgagc agcgagatcc
     2341 caaacgcgaa gccgagcacg gtcccggaga gccgggtgcc atcgatccgg gggatgttgc
     2401 ctcggtcgag atgcagcagg agcggtaccc cgactcgagc gagcagtacg cccagcagcc
     2461 cgcctcccag ggagagcagc gtgctctcgg tgagtgtctg gcggagcagc cgcccccggt
     2521 tggcgcccag ggccaggcgc accgccacgt cccgctgccg caacgcgccc cgggccagga
     2581 gcagattggc cacgttgacg cacgcgatca ggagaaccag cccgaccgca ccggccagga
     2641 cccagagcgc ggtgcgcacc gagccgacca tctgatcccg caggggcacg gtggtcatcc
     2701 gccagcccat cacggcgggc tcgccgtagc gatcggggaa agcggcacgc agccgcgccg
     2761 agaccagctc gaggtcggca cgggccgccg cctccgtcac atccgcccgg cgtcgcgcga
     2821 tcgcggcgat gtactggttg ccgcgcccag tcgcccgggc cgactcgtag tcgctcggga
     2881 tccagaagtc gcctcggttt cgcaagaaac cgagcggcgc atcggggaac cccacctccc
     2941 tcggcatgac cccgacgatg gtgcggatga acccgccgat gttgacggtt cgccccagga
     3001 tcttcggatc cgcgccgaaa cggcggcgcc agagtccgtc gctgatgatg atgacctttt
     3061 cggcgcccgc cgcgccgtcg tcgggccgga agctccggcc catcgcgggc gtggcgccca
     3121 gagcctcgaa gagattcggg gtgacgacgt aggctgagag tcgctccggt tcgccgccat
     3181 cgccgaggat ggtggagctt tgtccccgaa tagcgaccac cgcatcgaag gcgcggagtt
     3241 gctccttgaa gtcgaaatac tccgggggag aaatggcgtt gtaggtccgc cccgtccgat
     3301 tgctgtgcca cagcatctcg atccggtcgg cgtgctgata gggcaggggc ttgagcagca
     3361 cggcatgtac cacgctgaag atggcggcgt tggcgccgat gccgagggcc agcgtgatca
     3421 ggaccaccgc ggtgaacccg ggcgcccgcc ccagtccgcg cagcgccagg cgaagatcct
     3481 gtttcagcgt gtccatcgtg gcctcccgcc cggttcggcg gactcggtta ctggggttga
     3541 aacgggccgt gtccgcgtgc tcgagcgtcg cgctgccgat cacgtccatc acgattcgaa
     3601 gccacagccc ggctaccgcc ttgccgcgga cggcggcgcg gcgggcccgg tagaagtcga
     3661 tcatttcggc cgcatagcgg cgccggaagg ctccggggaa gagccgcaga agcagccggt
     3721 agaaccgttc cccacgaacc acggtcaggc ccggaccggg gtgatgatcc gccgctcctc
     3781 agccaggcgg accagggacc ggagccggag catttccgcc gccaggaccc gccgcccgaa
     3841 cggcgtcagc cggtagtaga tccggcgctc gtcatccgcc cgggcaggcc ggcgacccga
     3901 ctcggtgagg cacccgcttc cttccagccg ccggatgtgg cggtagagat tgccggcttc
     3961 gagcgcgatg cggccggcgg tgtactcgag gatgtcctgc ctcagaccgt agccgtgccg
     4021 gtcctggccg gccagcatca tgaggatcaa cgtctcaacc ggcttgagcg gcagcagggt
     4081 gtcgggactg gaaccggggc gatcgggggc catggcggct ccggaggcgg gggcggctac
     4141 tcaggttgaa acgactatag tcgattagat gcccccagcg gtggaaccgt tggaatggag
     4201 gaacgacggc cccgggatca gggccgggcg aaggtcacca ggcggcccgg gtagtcaaag
     4261 gtgacgacat aatgccgcat gaagccgtag ccgatgatca gatcgtggcc ccagtcctcc
     4321 ccggacagca acggcggcgc gatcatcacc ctgggcgagt ccaccgcgaa gggtcccagc
     4381 gtcacccggc ccacccgggt gaaccgcacg acctgcctcg ccgccgtgtc gccgctcatc
     4441 agaccgatgg ttgcccggcc gctgtccgga accgggcgca gccccgcacg ctcgaccagg
     4501 cggcgggtag cgatgaatgc acctgccccc ccggtatcga agagcccgcg gacgggccga
     4561 ccgtccacga agacactgtc ggtgaagggc aatgcccctg ctcgggggga gaagaccatg
     4621 gggaccgata cccgggagcc ggtggaaggg gtcgagccga tgggcgagct ccggtaaaac
     4681 cgcaccacct tggacggata gtcgacctgc agcaccaggt cacggaagaa ggcggtgctc
     4741 agcacgccat catggggccc gatgaggggt accaacgcct gggtcggaaa gacttcgacg
     4801 aacggccggt gctggaccac gtctccaatc gccaacgatg ccacctgggc ccgcccgagc
     4861 ccatcggctc cgggaggatc caggggcagc ccgagtcgct ccgccgaccc cgcgaccagc
     4921 gccaacggtc cccagccggt gtcgagcaac agccggaccg tatcgcggcc gttgatcacg
     4981 gccggcagga tgatcccatt ctggtgcaag gtgaacgaca cctcggcgag cggccggttc
     5041 tcagccgggg caccgggctg ggcctcgcct cggccgggcc aggcgatcat cacgatcagg
     5101 aacgaagcgg cacggaggat tctgtgatcc attctcgcac ggagggacga ataccttgaa
     5161 gacccgaccc cttcgtcagg ggcgaccgga ccgaagccgg accaggtcca actggttcca
     5221 ccgctcccgg cggaagagca atgccccgat gacggtcccg gcggccccac ccagcgccgc
     5281 gcccacgacc accttggtgt catcctggcc accgcagaag acgccgtagt catctcggtt
     5341 gaggctgcac gccacgaccc caccgacgcc ggcacccaga ataaggccca gcaccccgcc
     5401 cagaacgccg gggcgtcgtc cccgactcca ttccaggcgg ctgatgctgg aaagtggaat
     5461 ggtgaggctc cgcgacgagc cggcagagag tagcagggtc gtgtccgtca gcgcctggta
     5521 gctgccgatc tgcacccgcg ccggtgtgct ggcgagggtc actcgaagcc gggtgcgcgg
     5581 cgtgagtggc tcggtgtcct gggcaagaac aagggagagt ggccagaaga gggcgacgac
     5641 cagcagcgga atccgcatcg gaacgcctcg gcccaaagcg gtcagcgcag gtcggcgacg
     5701 gtacagtctt gcacggtacc atcgatgatg cggcagccta ggtcggtaca cgcgacaact
     5761 gcgcccgctt cagtcgaata ggtcgtggag ccgccgaacg cccgcaaccg tccactccgc
     5821 ccaatcagga ggtccagagt ccagcggtca gagccacgta gctgaaaggt ccgcggagtg
     5881 atggtgtagc ccttgtaggg aaacgggagc agaggctcct cctaaggtgg accctggaag
     5941 tatagcgctt ccgtccgagt ggaaccgccg ccgccccgaa cccgttggcg accgggcgct
     6001 taccccggag cgagccgacc gaggaacatc aggcggcacc cttccaaaga tcgcgcaact
     6061 gcacatggat cgctccgaca tcgtcggtcc agcttcccag cacgtagtcg cgaccgatgt
     6121 ccaacgggcg gaaccgcggg gggaactcga cctctccgcg gtagcggcca tccggagcga
     6181 acaccgacca gatcacccgg gccgtcccgg gaacctggaa attccgaacc cagagattgt
     6241 cgtcgggatc gcgcagaaga aatgtgaatg ccgggaggct gaccgaactc tgctaccgcg
     6301 atccggccgt cccgaagccg gaatgccgcc tgaacccggc tgaagaacgc ggcggaatcc
     6361 gccaactcgt ctccgagatt gagccgcggt cgctgggcga cgcgccatcc aaaggccgac
     6421 cgggaatcct gagcgaggag agatcccaga gggaaaagga tcaggcaggc agagacaaga
     6481 gccattggta gccgcaggcc cggccgcttc tcacgaaacc gcaacccctt cacgaaaccg
     6541 gacggcggta gcgccaggta cgccattgca gcagaccacc aaagacggcg acaaggggaa
     6601 ggaacaggat cagccggagg ttgtcgagcg gccgcaggcc gcggagggtg atggcgagca
     6661 gcagcaacca gaaggcgagg ctcggcgctg gcggccaccg ccggagcaaa gtccgcgcgg
     6721 ccaggaggat caagccaccg gcggctccac tcaccaagcc cagaaaaaca actgtcagcg
     6781 tgccgccgag cgagaaaccg ccggctcccg tagtggcttc ggcgacaagg cgcatcgcga
     6841 cccgaccacc gacgcccagg accaggacgc ccaggcccat gccccacagt agggttgcca
     6901 gtccagcctg agccgctgga ttcaagcgtc ccggtttcat gtccccgccc gcttccgccg
     6961 gcccaggtaa agcacgccgt atgcgatcag cgttgtcaca acgatagcga gcgtggtgag
     7021 gatcgtagca tatacgaaca ccatcccgac catgtcacca ccaagcggga agattccgat
     7081 gagcatcggg acatgaagca ggcccgccgt cagcagcagc aggccggcga gccgccgccc
     7141 gatcgtcgtg ccaggtggag aacgaaaggg caaccagagt gcaccggcga gcagataggg
     7201 gatggcttgc cagaggagga tcggaggttg aagcaggtag aatctcacgc cggg
//
LOCUS       DASWKS010000209         3586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1583516, whole genome shotgun sequence.
ACCESSION   DASWKS010000209 DASWKS010000000
VERSION     DASWKS010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583516"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(263..2137)
                     /locus_tag="VGA78_06230"
     CDS             complement(263..2137)
                     /locus_tag="VGA78_06230"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9893500.1"
                     /translation="MSRRAVPDLLRVLCLILLIPGAAGAQRTNKPPLHARHWMAITGK
                     PLGAAAGAMMFQKGGNPVDAAAAMLAVVSTMWDVLSWGGETQALIYHPGFKKVIALNA
                     LGMAPSGATPEYFRGKGMRYPPEFGPLAMVTPGTPGGLMTMLAEYGKLSLAEVLEPAI
                     QMADGYPIEAQTANAIENSKKRLKEWPYSKATMLPHLGEAREAPEAGEIFRQPDLAAT
                     LRKLVEAERQALKQGKSRQDAIYAAYQRFYRGDIAQEYVRGVREQGGLVTLDDLANWK
                     VRIEEPVSTSYKGIEVYKLNVWTQGPVLLQALNILEQADLKGMGYNSSRYLHTIYQAM
                     SLAFADRDFYYGDIYSPPEEPVKGLLSKEYAKQRYAQINWEKNDPDIKPGDPYPFQGG
                     SNPFTEYLTRWSVTGGTDTVSQPAQQSPSSDADFQRAFYAGTTSIQTADTSGWVVSIT
                     PSGGWVPAVIAGKTGVGLSQRAQSFVTHPADGPYNVIAPNKRPRVTLTPSMALKDGKP
                     FLSFAVQGGDSQDQNLLQFFLNMVEFGMTVQQAVEAPNLNSFQLRASFGAHEARPGRM
                     LLAESMPDWIRGELRRMGYTLAFERRTSGPINAIFFDWKHGSFWGGSSDHGEDYGIGW
                     "
     gene            complement(2284..2964)
                     /locus_tag="VGA78_06235"
     CDS             complement(2284..2964)
                     /locus_tag="VGA78_06235"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9893501.1"
                     /translation="MNGESRRARGLFHGLVVLGLIGCGGGSPLLNPDPSELARAAPDS
                     FDVRFETSRGPFVLRARRAWSPQGVDRLHYLVRHGFYDEARFFRVVGGFVAQWGLAGR
                     PTLDSLWQQRRLPDEPVRSSNTRGRVSYARGGPNTRSIQLYINLADNIRLDTLNSFGF
                     PPIGEVIEGMGVVDSVYSGYGGTRENRLPGPSQDSIRVVGNSYLERNFPRLDRIVGTK
                     VVREWKDH"
     gene            complement(3038..>3586)
                     /locus_tag="VGA78_06240"
     CDS             complement(3038..>3586)
                     /locus_tag="VGA78_06240"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893502.1"
                     /translation="KALPERGKIGIFNRSHYEEVLVVRVRGEVLERQRLPPGKRDQRF
                     WKQRYDDINRFERHLVRNGTVVLKFFLHISQEEQRRRLLQRLKNPRKQWKFEVGDLAE
                     RARWDDYMEAYEDALSATSTRWAPWHVIPADHKWTARALVGALLAHALSKLALKTPSV
                     AESDLKAFVKARRQLEREARER"
BASE COUNT          574 a         1245 c         1087 g          680 t
ORIGIN      
        1 gccgaatgcc caatgcagaa ggaacgacgc cttaggcccg cccctctgct atgggcattg
       61 ggcattcggc actctccggt tgactcgccc ctctcacctc tcccctctta ccatccaatg
      121 ccgtagtcct cccatggtcg ctcgaccctc cccaggccga atgcccaatg cagaaggaac
      181 gacgccttag gcccgcccct ctgctatggg cattgggcat tcggcattct ccggttgact
      241 cgcccctctc acctcccacc tcttaccatc caatgccgta gtcctcccca tggtcgctcg
      301 accctcccca gaacgatcca tgcttccagt cgaagaagat ggcgttgatg gggcctgagg
      361 tgcggcgctc gaacgccagg gtgtagccca tccggcgcag ctccccgcga atccagtccg
      421 gcatcgattc ggccaggagc atccggcccg ggcgggcctc gtgggccccg aacgaggccc
      481 gcagctggaa gctgttcagg ttgggggctt ccaccgcctg ctgcaccgtc atcccgaatt
      541 ccaccatgtt caggaagaac tgcagcaggt tctggtcctg ggagtcgccg ccctgcaccg
      601 cgaacgacag aaacggcttc ccgtccttga gcgccatcga gggggtgagc gtcacccggg
      661 gtcgcttgtt aggcgcgatg acgttgtagg gcccgtcggc cggatgggtc acgaagctct
      721 gggcccgctg gctcaatccc acgccggttt tcccggcgat caccgccggc acccagccgc
      781 cgctgggggt gatcgacacc acccagcccg aggtgtcggc ggtttgaatc gaggtggtgc
      841 cggcgtagaa tgcccgctgg aagtccgcat cgctgctggg ggactgctgc gccggctggc
      901 tcaccgtgtc ggtcccgccc gtcacgctcc accgggtgag gtattcggtg aaggggttgc
      961 tgccgccttg aaacgggtag gggtcgcccg gcttgatgtc gggatcattc ttctcccagt
     1021 tgatctgggc gtagcgctgc ttggcgtact ccttcgacag cagccccttc accggctcct
     1081 ccggcggcga gtagatgtcg ccgtaataga aatcgcggtc ggcgaaggcc aggctcatgg
     1141 cctggtagat ggtgtggaga tagcgggagg agttgtaccc catgcccttg aggtcggcct
     1201 gctccaggat attgagcgcc tggagcagga ccggtccctg ggtccataca ttgagcttgt
     1261 agacctcgat gcccttgtac gaggtcgaga ccggctcctc gatccggact ttccagttgg
     1321 ccaggtcgtc cagggtgacc agcccgccct gttcccgcac tccccgcacg tattcctggg
     1381 cgatgtcgcc ccgatagaat cgctggtacg cggcgtagat cgcgtcctgg cggctcttgc
     1441 cctgcttcag cgcctgtcgc tcggcctcga ccagcttgcg gagcgtggcg gccaggtcgg
     1501 gctgccggaa gatctctccc gcttcgggcg cctcccgcgc ttcacccagg tggggcagca
     1561 tcgtggcctt gctgtagggc cactccttga gccgtttctt gctgttctcg atcgcgttgg
     1621 cggtctgggc ctcgatggga tagccatcgg ccatctggat cgcgggctcc agcacctcgg
     1681 ccagactcag tttcccatac tccgccagca tcgtcatcag gccacccgga gtgcccgggg
     1741 tcaccatcgc cagcggtccg aattcgggtg ggtagcgcat ccccttgccc cggaagtatt
     1801 ccggcgtggc gccactgggc gccatgccca gcgcgttcag ggcgatgacc ttcttgaaac
     1861 cgggatggta gatgagcgcc tgggtctcac cgccccagct cagcacgtcc cacatggtgc
     1921 tcaccaccgc cagcatggcc gccgcggcat ccaccgggtt gccacccttc tggaacatca
     1981 tcgccccggc ggccgcgccc agcggcttgc cggtaatggc catccaatgc cgggcgtgga
     2041 gcgggggctt gttggtgcgc tgggcgcctg cggcacccgg aatgagaaga atcaggcaca
     2101 gaacgcgaag gaggtctggc actgcccgac gagacatcag gtctcccagt ggagcatggt
     2161 cgaatctacc acagcggtgg cattgacgat tgacaattga cgattgacga ttgacgattg
     2221 acgattgcgg atcgagtctc gtccactaac ggtggtcgcg caacaatcgt caatcgtcaa
     2281 tcgtcaatgg tctttccact cccgcactac cttggtcccc acgatccggt ctagacgggg
     2341 gaagtttcgc tcgaggtatg agttgccgac gaccctgatg gagtcttgcg agggtccggg
     2401 caatcggttc tcccgggtcc cgccgtagcc cgaatagacc gaatccacca cccccatccc
     2461 ttcgatcacc tcgccgatcg gcggaaaccc gaagctgttg agggtgtcga gccggatgtt
     2521 gtccgccagg ttgatataca gctggatcga acgggtgttg gggccgcccc gcgcgtacga
     2581 gacccgcccc ctggtgttgg acgaccggac cggttcgtcc ggcagccggc gctgctgcca
     2641 gagggaatcg agcgtcggcc ggccggccag gccccactgc gccacgaagc cgccgaccac
     2701 ccggaagaac cgcgcctcat cgtagaaccc atgccgcacc aggtaatgca gccggtccac
     2761 tccctggggc gaccaggccc gccgggcccg cagcacgaat ggcccccggc tggtctcgaa
     2821 ccggacatcg aagctgtccg gcgccgcccg ggccagctcc gacggatcgg gattgagcaa
     2881 gggcgacccg cccccgcagc caatcagccc caagacaacc aggccgtgga acagccctcg
     2941 cgcccggcgt gattcaccgt tcactgttcc ctgctcactg ttccctgctc accgttccct
     3001 gctcaccgtt ccctgttcac cgttcaccgt tgaccgttca ccgctccctg gcttcccgct
     3061 ccagctggcg tctcgccttg acgaaggcct tgaggtccga ctcggccacc gacggggtct
     3121 tgagcgccag cttggacaat gcatgggcca gtaacgcgcc gaccagcgct cgtgcggtcc
     3181 acttgtggtc tgccgggatc acgtgccacg gcgcccaacg ggtactggtg gcggacagcg
     3241 catcctcata cgcctccatg taatcgtccc atcgggcccg ctcggccagg tcgccgacct
     3301 cgaatttcca ctgcttgcgc gggttcttga gccgctgcag cagccgacga cgctgctcct
     3361 cctgcgagat atggagaaag aacttgagta ctaccgtccc attgcggacc aggtgccgct
     3421 cgaaccggtt gatatcgtcg tagcgctgct tccagaatcg ctggtcccgt tttcccgggg
     3481 gcagccgttg ccgctccagc acctcgcccc ggaccctcac caccagcact tcctcgtagt
     3541 gcgatcggtt gaagatcccg atcttcccac gctccggcag cgcctt
//
LOCUS       DASWKS010000210         6351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_469656, whole genome shotgun sequence.
ACCESSION   DASWKS010000210 DASWKS010000000
VERSION     DASWKS010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6351
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469656"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VGA78_06245"
     CDS             complement(<1..570)
                     /locus_tag="VGA78_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893503.1"
                     /translation="MQPRRAAVLGRHAGFEWLAFETPGGAPLLASRVARRLERAGRLA
                     AVLALDPDTRLLAMSVSFTPRPLLVAELDHPSGLALQCLERLEGAGGDGALAAAAHIA
                     RALDAEALGRRFFAAFRRTLHAMAESLAPRMPAADRHAITLLQLTRVLFLDFVQAKGW
                     LDGRGAFLREELDRALRGNGSVQHDLLQPH"
     gene            616..741
                     /locus_tag="VGA78_06250"
     CDS             616..741
                     /locus_tag="VGA78_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893504.1"
                     /translation="MARLAHQRRQVFEMPDTVQQGGQMISAVAVVTTVGKSAGKR"
     gene            complement(799..1143)
                     /locus_tag="VGA78_06255"
     CDS             complement(799..1143)
                     /locus_tag="VGA78_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893505.1"
                     /translation="MLEFTLLVIAIICLAILVRPLWRRVTLPAWLVRARVRHRPGIPI
                     TSWLAALLLMDFIWLIGERRGVWGAIAWSIWVGAPLAATWVTWYWLRGGRTDGRAGGR
                     TDGQADGRPDGL"
     gene            complement(1164..1919)
                     /locus_tag="VGA78_06260"
     CDS             complement(1164..1919)
                     /locus_tag="VGA78_06260"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX9893506.1"
                     /translation="MEFGPLHPDTPRRRDGWHSPVLDLDMPIVSYGDRGRPLLLFPTA
                     AADFLENERFYLVKSVEPFIAAGRIRLFSIDSCNRWTWMDQSLPVKEQARRQALYSRY
                     VEEEVAPHIRRVAGDGPIGVTGASFGAFHAANAMFRRPDLFDTLIGMSGFYDLANDYL
                     RGYSDDNCYYNNPAWYLPGLSGGSLDQLRHHARIVLVTGQGAYEAPHESRRLSEILSR
                     KAIPHALDLWGHDVDHDWPWWRKMLSRYVDRLY"
     gene            complement(1919..2248)
                     /locus_tag="VGA78_06265"
     CDS             complement(1919..2248)
                     /locus_tag="VGA78_06265"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HEX9893507.1"
                     /translation="MEQCLLRIYVGEDDRVDGKPLYEWVVLEAKGRRLGGATVLRGIM
                     GFGAKSHLHTFKIERLSLDLPIVIEIVDSRERLEAFLADVQPKLSDGIATLERVEVIR
                     FGTGTRT"
     gene            complement(2251..2631)
                     /gene="crcB"
                     /locus_tag="VGA78_06270"
     CDS             complement(2251..2631)
                     /gene="crcB"
                     /locus_tag="VGA78_06270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX9893508.1"
                     /translation="MRNILMVAAGGAAGAVLRHLLGGLVQGRITAIFPLGTLAVNLLG
                     CLAIGVASELAESRGALDPATRALLVVGVLGGFTTFSAFGNETLNLLRDGERLLAGGN
                     VAANVILGLAAVWVGRAAAAALWR"
     gene            complement(2628..3794)
                     /locus_tag="VGA78_06275"
     CDS             complement(2628..3794)
                     /locus_tag="VGA78_06275"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9893509.1"
                     /translation="MPALPPLLALPWLVPYLVLPMLSRRRPLLLAEAPAAGPLVSVIV
                     PARNESGNINRLLTSLRATTYSPVEIVVVDDRSTDDTAARVEAHAKADPRVRLVRGEP
                     LPPGWFGKPWACFQGAERAHGELLVFTDADTTHEPGFLAHAVGAFQRSGSDLLTVVTG
                     QILKTFWERVVMPHFWLPLGLRYYPGRVNAATKPRDVLANGQFFMTSRTAYTRIGTHE
                     AVRSEVAEDVVIGQRYLSAGLKIRMWWAEELIQTRMYTGFSHLVEGWSKNLYLGSRAS
                     FPGQPLLQASAPFVLLAGQAFWLAPLVALLVDGAGWAPWAIGLSAGFWAIISAGLKVP
                     LWYGMTYPIGVLMLVYLVLRSGFRGRRKIEWRGRTYRGVEDGRSGSKAVEGGRE"
     gene            complement(3801..4367)
                     /locus_tag="VGA78_06280"
     CDS             complement(3801..4367)
                     /locus_tag="VGA78_06280"
                     /inference="COORDINATES: protein motif:HMM:NF025719.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsbRD N-terminal domain-containing protein"
                     /protein_id="HEX9893510.1"
                     /translation="MRPSHPTLVAASRAIASHRDAMVARWNEWLGERLTSRSVSRAVV
                     ERQLRLIIDVLAAMIGPLRRETKPIWAEVTEHYGRIAAVRGLAAGEVVEEMQYLREVL
                     IRHLAPSIAAMRPRQGMALLLRLNRLVDKGVAMAVVGYTDALVHTLLPGDGPSSNGAP
                     SIDPAELQHELDAITRSLQAITGAASRR"
     gene            4416..5378
                     /locus_tag="VGA78_06285"
     CDS             4416..5378
                     /locus_tag="VGA78_06285"
                     /inference="COORDINATES: protein motif:HMM:NF014114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEX9893511.1"
                     /translation="MTSTQTTRPARLTPGARVALLAPSGAVLERDDLDRSAELCRALS
                     LEPVIMPSAHKRLGYLAGSDADRLDDLQQALDDASLGALWSVRGGFGVTRILRRVGFE
                     GLARNPKVLLGFSDITALLLAAHAATGLVTHHGPVARNGLTAFARERLERVLFDPTPA
                     GKLPLPPPRPGVVVPREPRVVPLQSGVADGPLLGGNLTLIQCLIGTGTLPPFKGVILF
                     LEEVGEDLYRVDRCLAHLRDAGLLDQVAGVAIGQFSDLKKDTGSGARSLHEVLLDYLE
                     PLGIPAAYGFPIGHVDDQWTVPIGVRARLDASAGTLTLLEGAVA"
     gene            5623..6234
                     /locus_tag="VGA78_06290"
     CDS             5623..6234
                     /locus_tag="VGA78_06290"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEX9893512.1"
                     /translation="MLRWRHVPAELSLFDRLTDLASYHPKAEADPARIPSAVSIICVR
                     DPDALLLIRRSEREGDPWSGQLGLPGGRKSPQDPDLLTTAIRETQEEVGIELRPSELA
                     GTLDDLVPSTVLLPRIKVRPFVFLLSARPTLFPNIEVASSWWVTLEEMLSPGVYGSYQ
                     VRGRDFAMSRPGYRLEEGVVWGMTERILTPFFERLAHWPDARP"
BASE COUNT         1077 a         2215 c         2051 g         1008 t
ORIGIN      
        1 gtgcggttgc agcaggtcgt gctgaacgga gccattgccc cgtaatgctc ggtcgagttc
       61 ctcccggagg aacgccccgc gtccgtccag ccagcccttg gcctgcacga aatcgaggaa
      121 cagcacccgg gtgagctgca gcagcgtgat cgcgtgccgg tcggccgccg gcatgcgagg
      181 agcgagcgac tccgccatgg cgtgaagggt gcgccggaac gccgcgaaga accggcggcc
      241 cagcgcttca gcatcgagcg ccctggcgat gtgcgccgcg gccgcgagtg cgccatcgcc
      301 tcccgctcct tccaaccgct ccagacattg aagcgccagg ccggagggat gatccagctc
      361 tgccaccagc aagggccgag gggtaaagct caccgacatg gccaggagcc gggtgtcggg
      421 atcgagtgcc aggaccgccg ccagccgacc ggcccgctcc agccggcgcg ccactcggct
      481 ggcgagtaac ggagccccgc ccggcgtctc gaacgcgagc cactcgaatc cggcgtgccg
      541 tcccagcacc gcggcacggc gaggctgcac cccctcgacc catccttccg gtggcagcca
      601 ttggaccgtg agctgatggc ccgccttgcg caccagcggc gccaggtctt cgagatgccg
      661 gataccgtcc agcagggtgg gcagatgatc tccgccgtgg cagtcgtcac cacggtgggc
      721 aaatcagccg ggaagcgtta acccgatttg cgccggaatt atcggaatgc gggtgcccgt
      781 cggagcaaga gcgagcacct acagtccgtc gggccgcccg tccgcctgtc cgtccgtccg
      841 tccgcccgcc cgtccgtccg tcctcccccc cctgagccag taccacgtca cccaggtcgc
      901 cgccagcggc gccccgaccc agatcgacca ggcgatcgcg ccccagaccc cccgccgctc
      961 gccgatcagc cagatgaagt ccatcagcaa cagcgccgcc agccacgacg tgatcgggat
     1021 cccgggacga tgtcgcacgc gggcccggac caaccaggcc ggcagcgtca cccggcgcca
     1081 aagcggtcgc accagaatcg ccaggcagat gatggcgata accagcagag tgaattcgag
     1141 cattaaagcg gcccctggcg cgatcagtag agccgatcga cgtaacgcga cagcatcttg
     1201 cgccaccagg gccagtcgtg atccacgtcg tggccccaga gatccagcgc gtgggggatg
     1261 gccttgcggc tcaggatctc cgacaggcgc cgggactcgt gcggggcctc atacgcgccc
     1321 tgaccggtga ccagcacgat ccgggcatgg tgccgcagct ggtccagcga accgcccgag
     1381 agaccgggca ggtaccacgc cgggttgttg taatagcagt tgtcgtcgga gtacccccgc
     1441 agataatcgt tggccaggtc gtagaagccg ctcatgccga tcagcgtgtc gaacaggtcc
     1501 ggccggcgaa acatcgcgtt cgcggcatga aaggctccga agctcgcgcc ggtgacgcca
     1561 atgggcccat ctcccgcgac ccgtcggatg tggggagcca cttcctcctc gacataccgg
     1621 ctgtagagcg cctgccggcg cgcctgttcc ttcacgggca gggactgatc catccaggtc
     1681 cagcgattgc agctgtcgat ggagaacaag cgaatccggc ccgccgcgat gaacggctcc
     1741 accgacttca ccaggtagaa ccgctcgttc tccaggaagt cggccgcggc ggtgggaaag
     1801 agcagcagcg gccgaccccg atcgccatag ctcacgatcg gcatgtcgag gtcgagcacc
     1861 gggctgtgcc agccgtcgcg ccgtcgcggc gtgtcgggat gaagcggtcc gaactccatc
     1921 aagtccgagt cccggtgccg aaccggatca cctccacccg ctccagcgtt gcgatgccgt
     1981 cggacagctt gggctggacg tccgccagaa acgcctccag ccgttcgcgg ctgtcgacga
     2041 tctcgatcac gatgggcagg tcgagcgaga gccgctcgat cttgaaggtg tggaggtggc
     2101 tcttggctcc gaagcccatg atgccgcgca gaacggtcgc gccgcccagg cggcggcctt
     2161 tcgcttccag caccacccac tcgtagagcg gcttcccgtc cacccggtcg tcctcgccga
     2221 cgtagatgcg gagcaggcac tgttccattc tcacctccac aatgccgcgg ctgcggcccg
     2281 accaacccag accgccgcca gcccgaggat gacgttggcg gccacgttcc cgccggccag
     2341 caggcgctct ccgtcacgca gcagattcag cgtttcgttg ccgaaggctg aaaaggtggt
     2401 gaaacctccc agcactccga ccaccagcaa cgcccgggtc gcgggatcca gcgcgccccg
     2461 cgactcggct agctcggagg ccaccccgat ggccaggcaa ccgagcaggt tgactgccag
     2521 tgttcccagc gggaagattg cggtgatccg gccctggacc agtccgccca acaggtgccg
     2581 cagcaccgcc cccgccgcgc ccccagccgc taccatgagg atgttcctca ctctcgaccg
     2641 ccttcgaccg ccttcgaccc gcttcgaccg tcttcgaccc cgcgataggt ccgtccccgc
     2701 cactcgatct tccgccgccc tcggaagccg gagcgaagta ccagataaac caacatcagg
     2761 accccgatcg gataggtcat cccgtaccac aacggtacct tcagcccggc cgagatgatt
     2821 gcccagaacc cggcgctgag cccaatcgcc cagggcgccc aaccggcgcc atccaccaaa
     2881 agtgccacca agggggccag ccagaatgcc tgtccggcca gcagtacgaa cggagccgaa
     2941 gcctgcagca gcggctgtcc ggggaacgag gccctggagc ccaggtagag gttcttcgac
     3001 cagccttcca ccaggtgcga gaacccggtg tacatcctgg tctggatcaa ttcctcggcc
     3061 caccacatcc ggatcttgag cccggcggaa aggtatcgct gcccgatcac gacatcctcc
     3121 gccacctcgc tccgcaccgc ttcgtgggtc ccgatccggg tgtaggccgt gcgcgaggtc
     3181 atgaaaaact gcccgttggc cagcacgtcc cgcggtttgg tggcggcgtt gacccgtccg
     3241 gggtaatagc gcaggcccag cgggagccag aagtggggca tcaccacccg ctcccagaat
     3301 gtcttcagga tctgaccggt gaccacggtc aggagatcgc tgccgctgcg ctggaacgct
     3361 ccgaccgcgt gcgcgaggaa cccgggttca tgggtcgtgt cggcgtcggt gaagaccagc
     3421 agctcaccgt gcgcccgctc ggctccctga aaacaggccc acggtttgcc gaaccagccc
     3481 ggcggcaatg gctcaccccg caccagtcgg actcgcggat cggccttcgc atgggcctcg
     3541 acccgcgcgg cggtgtcgtc ggtggagcgg tcgtccacca cgacaatctc caccggcgaa
     3601 taggtggtgg cgcgaagact ggtcaggagc cggttgatgt tgcccgactc gttccgggcc
     3661 ggcacgatca cactgaccag cgggcctgcg gctggcgctt cggccagcag cagcgggcgg
     3721 cgccgggaaa gcatcggaag aacgaggtag ggaacgagcc aggggagcgc gagcaggggc
     3781 ggcagagcgg gcatgccgcg tcagcggcgt gacgccgcgc ccgtgatcgc ttggaggctc
     3841 cgggtgatcg cgtcgagctc atgctgcagc tcggccggat cgatcgaggg cgcaccgtta
     3901 gaggagggtc cgtctcccgg caggagggtg tggaccagcg cgtcggtata tccgaccacg
     3961 gccatcgcga cccctttgtc caccagccgg ttgagtcgca gcagcagcgc catgccctgg
     4021 cgcgggcgca tggcggcgat ggaaggggcc aaatgccgga tcagcacctc gcgcaggtac
     4081 tgcatctcct ccaccacctc gcccgctgcc agcccccgca ccgccgcgat gcgcccgtag
     4141 tgctccgtca cttccgccca gataggtttc gtctcgcgcc ggagcgggcc gatcatggcg
     4201 gccaggacat cgatgatgag ccgcagctgc cgctctacca cggcgcgact caccgagcgc
     4261 gaagtcagac gttcccccag ccactcgttc caccgggcga ccatggcatc gcggtgcgag
     4321 gcgatcgcgc ggctggcggc aacgagggtg gggtgggacg gacgcaaggc gggagctccg
     4381 gatggacggc gggggtaaac ctaacggggg tggggatgac gtcaacgcag accacacggc
     4441 cggcccggct cacgccgggc gccagagtcg ccctgctggc acccagcggc gcagtcctgg
     4501 agcgggacga cctcgatcga tcggccgaat tgtgccgggc cttgagcctg gagccggtga
     4561 tcatgccctc ggcccacaag cggctcggtt acctcgccgg gagcgacgcc gaccggttgg
     4621 atgacctcca gcaggcactg gatgatgcta gtctgggcgc tctctggagc gtgcgaggcg
     4681 gattcggcgt gacccgcatt ctccgtcgag tcgggttcga ggggctggcc cgaaacccca
     4741 aggtgctgct gggtttctcc gacatcaccg cgttgttgct tgccgcccac gccgccaccg
     4801 gtttggtcac ccatcatgga ccggtcgccc gcaatggcct cactgccttt gcccgggaac
     4861 ggctggagcg ggtcttgttc gacccgaccc ccgcgggaaa gctgcctctg cccccacccc
     4921 ggcccggtgt tgtggttccc cgcgagccgc gggtggtgcc gcttcagtcc ggggtggccg
     4981 acggccctct gctggggggc aacctcacgc tgattcagtg tctcatcggc accgggaccc
     5041 tgcccccgtt caagggagtc attctctttt tggaagaggt tggtgaagac ctgtaccggg
     5101 tggaccgctg cctcgcgcac ctgcgggatg cgggattgct ggaccaggtg gccggagtgg
     5161 cgatcggtca gttcagcgac ttgaaaaagg acaccggcag cggcgcccgc tccctgcacg
     5221 aagttctgct cgattacctg gagccgctcg gcatccccgc cgcgtacggc tttcccatcg
     5281 gtcacgtcga cgatcagtgg accgttccga tcggggtccg ggctcgcctg gacgcgtcag
     5341 cgggaaccct caccttgctc gaaggcgccg tcgcctgatg actcgggtca actcccttga
     5401 ccgggcgagc cgtcccggcg aagctccggt catgccattg ttcgagtatc aatgctcgga
     5461 gtgcgaagcc accttcgagc gcctcctgcg cgcaccggtc cgagtcgatt gtccctcatg
     5521 cggatcgccc aaagtccaga agctcctctc ggtccccgcc cgcccggctt caaacgccgc
     5581 gcccgccacc ggaccatgcg gcgatgacgc tccgtccggt ggatgctgcg gtggcggcat
     5641 gtgccagctg aactgagcct gttcgatcgc ctcaccgacc tcgcgtccta ccaccccaaa
     5701 gcagaggccg atcccgctcg gatcccgtct gcagtttcga tcatatgcgt gcgggatccg
     5761 gacgcgctgc tgttgatccg ccgctccgag cgcgagggtg atccctggtc gggccaactc
     5821 ggcctgccgg gcggtcgaaa gagcccccag gatccggacc tgctcaccac cgccatcagg
     5881 gagacgcagg aggaggttgg tatcgagctc aggccatccg agctggcagg cacgttggat
     5941 gatctggtcc cctccaccgt gctgctgccc cggatcaagg tccgtccctt tgtcttcctg
     6001 ctctcagccc gtcccaccct gtttcccaat atcgaagtcg ccagcagctg gtgggtgacg
     6061 ctcgaggaaa tgctctcacc cggcgtctat ggcagctacc aagttcgtgg ccgggatttc
     6121 gctatgtctc gcccggggta ccggcttgaa gagggggtcg tctgggggat gacggagcgg
     6181 atcctcactc cctttttcga acggttggcc cactggccag acgcaaggcc ctaaatagtt
     6241 attgaagcgt aacttacggc gtcgcatctg gagttcgcgt tgggcggttg accgcgggta
     6301 gcttgacaga gttaggcaag actaatattg ttgtgcggtg tgattaattg c
//
LOCUS       DASWKS010000211         3487 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1584120, whole genome shotgun sequence.
ACCESSION   DASWKS010000211 DASWKS010000000
VERSION     DASWKS010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1584120"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VGA78_06295"
     CDS             <1..432
                     /locus_tag="VGA78_06295"
                     /inference="COORDINATES: protein motif:HMM:NF013199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893513.1"
                     /translation="GPGGLRGPQGMPLLKPPYGRITAIDLNTGEHLWQITNGGTPESI
                     RSNPALKGITIPPTGASAHANVLLTRTLLFYGEGRGGAALFHAVDKRSGEEIAAVNLP
                     AETNAAPMTFMHQGRQYIVVAIADADVTAELVALALPREDR"
     gene            429..1316
                     /locus_tag="VGA78_06300"
     CDS             429..1316
                     /locus_tag="VGA78_06300"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX9893514.1"
                     /translation="MSIGGRRWRWTATAALALVAVETPAETQVLRYVRYARGEQVALG
                     LLEGETIRELRGDLFASPTPTGRTVRLADVKLLAPVDPARVSKVLGVAVNSKRPGRDT
                     AIANPRWFAKLPTSINDPEGEIELPPEAANLNYEGELVIVIGKRGRHIPPERALEHVF
                     GYTVGNDVSENTWYGERQGDREPTRLISKAADTWAALGPVLVSGIDWRGLRVVTRLNG
                     EVVNEGITDDLINDVPNLVSYLSRYVTLLPGDLLYTGTYRYVPGTRRAFQAGDIVEVE
                     IEKIGILRNRIVPMKVPAP"
     gene            1313..2479
                     /locus_tag="VGA78_06305"
     CDS             1313..2479
                     /locus_tag="VGA78_06305"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893515.1"
                     /translation="MKAASLLPSPCFLLPAFCFLLPVLGSAQLPPPAPLAKGERGVPG
                     YEVDPSWPRPLPGKWILGQVSGIWVDSRDHVWVLHRPRTLTPREAGAVQTPPISECCI
                     PAPSVLQFDPEGNVVRAWGGPGHGDFWPGSEHTIYVDHQDNVWIGSSARTDHVVQKYS
                     PDGKLLLQIGQPGQTAGSNDTTLLGGPAGITVDPAANEVYIADGYVNRRVIVFDAATG
                     RYRRHWGAYGKRPDDASLPLYDPAAPPSPQFRSADPRVVAVHAVRIDQDGLVYVADRG
                     NNRIQVFRKNGEFVKEAFLARETLAMGSVWDITFSRDPEQRWVFVPDGTNQKVWILRR
                     SDLRVAGEFGRGGRNAGYFGWVHNLTIDSRGNIYTSEVDIYKRVQKFRPAGSLP"
     gene            2476..>3487
                     /locus_tag="VGA78_06310"
     CDS             2476..>3487
                     /locus_tag="VGA78_06310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9893516.1"
                     /translation="MKPGRRAFLKSAGAGAGLLAAGPRLAAALSRQSPDVVVIGAGAF
                     GGWTALHLCRLGATVTLVDAYGPGNSRATSGDETRGVRSSYGTSTYADLWIPWAREAL
                     TRWKAFDEEWGRAMKLRLFFTTGDLIFREKDEPVVAKTREHWQRLGIRHETLDPAEVQ
                     REYPVFDLRKITVALHEPDAGVVRARRACEVVAEVCRQRGARVMVGRALPGGASNGRL
                     NSVALAAPEGTLRAAAFVFALGPWFPRMFPELMGKRIFTPLGHVHYFGTPPGDDRFTF
                     PNLPSWNFPGVTGWAALPADNRGFRVRWRGERVFDPDRSQRAFPRKHDKAARQLLKQR
                     FPL"
BASE COUNT          523 a         1258 c         1208 g          498 t
ORIGIN      
        1 ggtcccggcg ggctgcgcgg gccgcagggc atgccgctgc tcaagccgcc ctacggccgc
       61 atcaccgcca tcgatctcaa caccggcgag cacctgtggc agatcaccaa cggcggcact
      121 ccggagtcca tccggagcaa cccggcgctc aagggcatca ccattccacc gaccggcgcc
      181 agcgcgcatg ccaacgtgct gctgaccagg accctgctct tttacggcga gggccggggc
      241 ggggcggcgc tcttccacgc cgtcgacaag cggagcggcg aggagatcgc ggcggtcaac
      301 ctgcccgccg agaccaacgc ggcgcctatg accttcatgc accagggccg tcaatacatc
      361 gtggtggcga tcgcggacgc cgacgtcacg gccgaactgg tggcgctggc cctgccccgg
      421 gaggaccgat gagtattgga ggccgacggt ggcgctggac cgccacggca gccctggcgc
      481 tggtcgcggt cgaaacgccg gcagagaccc aggtcctgcg ctacgtgcgc tatgcccggg
      541 gcgagcaggt ggcgctggga ctgctcgaag gcgaaaccat ccgcgagctc cggggtgacc
      601 tgttcgcctc gcccacccca accggccgca ccgtgcgtct ggccgacgtg aagctcctgg
      661 ccccggtcga tcccgcgcgg gtgtccaaag tgctcggcgt ggcggtcaac tccaagagac
      721 cgggtcgcga cacggccatc gccaatccgc gctggttcgc caagctgccg acctcgatca
      781 acgaccccga aggcgagatc gagctgccgc ccgaggcggc caacctgaac tacgagggcg
      841 agctggtcat cgtcatcggg aagcgcggac gccacatccc gccggagcgg gccctggagc
      901 acgtgttcgg ctacaccgtc ggcaacgacg tgagcgagaa cacctggtac ggggagcgcc
      961 agggcgaccg cgagcccacc cgcctcatct ccaaggccgc cgacacctgg gccgcgctgg
     1021 gcccggtgct ggtctccggc atcgactggc gcggcttgcg cgtggtcacg cggctcaacg
     1081 gggaggtggt gaacgagggc atcaccgacg acctcatcaa cgacgtcccc aacctggtca
     1141 gctacctcag ccgctacgtc acgctcctgc cgggcgatct gctctacacc ggcacctatc
     1201 gctacgtgcc cggcacccgc cgcgcgttcc aggccggcga catcgtggaa gtggagatcg
     1261 agaagatcgg aatcctgcgg aaccggatcg tcccgatgaa ggtgccggcg ccatgaaagc
     1321 cgcgtccctg ctcccttctc cctgcttcct gctccctgct ttctgcttcc tgctccccgt
     1381 tctgggttcc gcccagcttc cgccgcccgc gccgctcgcg aagggggagc ggggggttcc
     1441 cggctacgag gtcgatccct cctggcccag gccgctgccg ggcaagtgga tcctgggaca
     1501 ggtgtcgggg atctgggtcg actcccgcga ccacgtctgg gtgctgcacc gcccgcgcac
     1561 gctcaccccg cgcgaagccg gcgcggtcca gactccgccg atctcggagt gctgcatccc
     1621 cgcgccgtcc gtgctccagt tcgacccgga gggcaacgtg gtgcgggcct ggggcggtcc
     1681 cggccacggc gacttctggc cggggagcga gcacaccatc tacgtggatc accaggacaa
     1741 cgtgtggatc gggagcagcg cccggaccga ccacgtggtg cagaagtact cccccgacgg
     1801 caagctcctg cttcagatcg ggcagccggg ccagaccgcc gggagcaacg ataccacgct
     1861 gctgggcggg ccggccggca tcacggtgga ccccgcggcc aacgaggtgt acatcgccga
     1921 cggctacgtg aaccgccggg tgatcgtgtt cgacgccgcg acgggccggt accggcgcca
     1981 ctggggcgcc tacgggaagc gtcccgacga cgcctccctt cccttgtacg atcccgccgc
     2041 cccaccgtcg ccccagttcc ggagcgccga ccccagggtg gtcgcggtcc acgccgtccg
     2101 catcgaccag gacggcctgg tgtacgtggc cgatcggggc aacaaccgga tccaggtgtt
     2161 ccgcaagaac ggcgaattcg tgaaggaggc gttcctcgcg cgcgagaccc tggccatggg
     2221 ctcggtctgg gacatcacct tctcccgcga ccccgagcag cgctgggtgt tcgtccccga
     2281 cggcaccaac cagaaggtct ggatcctccg ccgctccgac ctccgggtgg ccggggagtt
     2341 cgggcgcggg ggccggaacg ccggctattt cgggtgggtc cacaacctca cgatcgactc
     2401 gcgcggcaac atctacacct ccgaggtgga catctacaaa cgggtgcaga agtttcggcc
     2461 cgcgggctcg ctgccgtgaa gccgggccgc cgggcgtttc tcaagtcggc gggggccggg
     2521 gcgggactgc tggccgccgg cccgcgactc gctgcggcgc tgagccggca gtcaccggac
     2581 gtggtggtga tcggcgccgg cgcgttcggg ggatggaccg cactgcatct gtgccgcctg
     2641 ggcgccacgg tgaccctggt ggacgcctac ggtccgggca actcccgcgc gacctcgggc
     2701 gacgagaccc gcggggtgcg gagctcctac ggcaccagca cgtacgccga cctgtggatc
     2761 ccctgggccc gggaagcgct gacccggtgg aaggcgttcg acgaggagtg gggccgcgcg
     2821 atgaagctcc ggctcttctt caccaccggt gatctgatct tccgcgagaa ggacgagccc
     2881 gtcgtcgcca agacccgcga gcattggcag cggcttggca ttcggcacga gacgctcgat
     2941 cccgccgagg tgcagcgcga gtatccggtg ttcgacctgc gcaagatcac cgtcgcactg
     3001 cacgagcccg acgccggggt ggtgcgggcc cggcgcgcct gcgaggtggt cgccgaggtc
     3061 tgccgccagc gcggggcccg ggtgatggtg ggacgggccc tgccgggcgg cgcgagcaac
     3121 ggccggctca acagtgtggc gctcgcggcg cccgaaggca cgctccgggc cgccgcgttc
     3181 gtgttcgcgc tgggcccgtg gttcccccgg atgtttcccg agctcatggg caagcggatc
     3241 ttcacgccac tgggccacgt ccactacttc ggcacgccgc ccggcgacga tcggttcacc
     3301 ttccccaatc tgcccagctg gaactttccc ggcgtcacgg ggtgggcggc gctgccggcc
     3361 gacaaccgcg ggttccgggt gcgatggcgg ggcgagcggg tcttcgaccc ggatcggagc
     3421 cagcgcgcct tcccccgcaa gcacgacaag gcggcacggc agctgctcaa gcagcggttc
     3481 cccctgc
//
LOCUS       DASWKS010000212        15107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1963054, whole genome shotgun sequence.
ACCESSION   DASWKS010000212 DASWKS010000000
VERSION     DASWKS010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1963054"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..1144)
                     /gene="add"
                     /locus_tag="VGA78_06315"
     CDS             complement(119..1144)
                     /gene="add"
                     /locus_tag="VGA78_06315"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEX9893517.1"
                     /translation="MLSRELIGRLPKAELHVHLDGSLRPATMVELARAAGVALPTTDP
                     VRLQSFMRVDDAHNLEEFLTRFEVTIALLQTPEAIEQVAYEMVEDGAADNLRYLEVRY
                     CPWLSTRGGLTLDQVIEAEALGLARGSRDFGVRTGIINCSLRHYPADRSLAIARHSVD
                     ARSQGVVGFDLAGGEAGRMPGVHAAAFDVAAGGLLGITVHAGEAAGPESIAEAIHRCH
                     AMRLGHGTRLFEAPALQDFVRDRRIAMEINITSNLQTHAVARAADHPVRRYLDAGLNL
                     TLCTDSWLMCGVSLSDEYWLAHTELGCTREEIDRMILNGFESAFLPWPEKRELVARVQ
                     VELEALR"
     gene            complement(1131..1382)
                     /locus_tag="VGA78_06320"
     CDS             complement(1131..1382)
                     /locus_tag="VGA78_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893518.1"
                     /translation="MSPDNELVTAFVNERPVRVPRGSAVLAAVRAHDPALAARVAAGE
                     GYLTDGRGIRVTPDQPLPAGAIIRVVVPARRSREPDAQP"
     gene            1544..1915
                     /locus_tag="VGA78_06325"
     CDS             1544..1915
                     /locus_tag="VGA78_06325"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9893519.1"
                     /translation="MPGLSPSTLLLAIAEPTRLRIVNCLAAAPLFVSDLQVILELPQP
                     TVSRHLTVLRHAGIVRDTPVGQFVLYRLFRPGRHERLLNAVLDGLASEETMKLERHRA
                     LDRSRARGVERSVPRLAPREP"
     gene            1920..2627
                     /locus_tag="VGA78_06330"
     CDS             1920..2627
                     /locus_tag="VGA78_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9893520.1"
                     /translation="MTQRILVVDDEPDITALVAYHLAKAGYRVSTASSGAEALRAARE
                     ERPDVVVLDLMLPGVSGYDVLTELRSREETRDVGVILLTARREETDRIRGLSLGADDY
                     LTKPFSPQELTLRVGAVLRRLQAPAVAGGSSITAGPLTIDRSAHRVMFEGQELTLTAT
                     EYKLLMTLVERRGRVQTRPQLLETVWEAQPDIQTRTVDMHVQRLRTKLGEAGRMIETV
                     RGFGYRFRGTERGSRAR"
     gene            2624..4321
                     /locus_tag="VGA78_06335"
     CDS             2624..4321
                     /locus_tag="VGA78_06335"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9893521.1"
                     /translation="MRVAGRLLLGMVGVLLFAIVVVVWASRTAVRRQLEQQLQADLEG
                     QARLIQAALPDDPGAWPRLVGRWAAMRSHRVTVLDPEGRPLADNQIPPGVLVNQPALG
                     GLPEVQAAVAGRVGVQVRSDAGEPARLWVAVPGSPIVRVASDLATLETAAGRSHRVIL
                     WGALLGLGAGTLLAVLAGRAIANPLQQIAAAARAIPSGLPPRFPRSRITEIDQLSQAL
                     RQMHQELGDRFEALRRGRVESSALVDAMVEGVLATDKKGRIVTANPAARRMLGYTENQ
                     LMPDLPELFRAKAAREVVDASMRGETVEDRALDLDERSFLVNSRPLASGGAVLVLHDV
                     TEVRRLETVRRDFVANVSHELKTPLTSIAGFAETLLSEDPDPGTRRLFLRTILSNSQR
                     MQQLVDDQLNLSRIESGGWQPRLETLEVAKAVREAWQPRADRAAASRIQFLVDVSEAA
                     QVIRADPEAMRQILGNLYDNAIRFTPPGGSITTRSSADDGGVTVAVSDTGSGIGSEHL
                     PRIFERYYRVDQGRSRDVGGTGLGLAIVKHLVEAHGGRVSAESELGRGTTIKLWVPS"
     gene            4361..4720
                     /locus_tag="VGA78_06340"
     CDS             4361..4720
                     /locus_tag="VGA78_06340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893522.1"
                     /translation="MTRGNQFLLVNMLTPVLTCVLPQYLDSAAVSAIRGNAALHPSAH
                     YLILEADQVTHFDPVGVLRLWDFCHEQLSRGLRVELVHLHPALSHRLRAHPLMEFVAD
                     GDRIFQDPFASLEASQR"
     gene            4862..5905
                     /gene="pstS"
                     /locus_tag="VGA78_06345"
     CDS             4862..5905
                     /gene="pstS"
                     /locus_tag="VGA78_06345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX9893523.1"
                     /translation="MRNPVMRAGAALAALIVAAGPACSQSLVGAGATFPYPLYSKWFD
                     AYNKKARVQINYQSIGSGGGIRQFTQGTVDFGASDSPMTDEQMAALKGNVVHIPTVLG
                     AVVLTYNLPALGATPLKLDGATIADIFLGKVTQWNHPKIGALNPGANLPKTDIIVVHR
                     SDGSGTTFVFVDYLSKVSPEWKSKVGAATSVSWPVGLGGKGNEGVTQQVKQTGGSIGY
                     VELVYALSNKLPVSLVKNAAGQYASASLEAVTAAAAGAKLEKGTDFRVSITNAAGAKS
                     YPIASYTWLLVKNDTPDAGKAKSLKDFLAWMVTPEAQKMAADLGYAPLPDDVSGLVRE
                     RIKTLKSGGRPIA"
     gene            5924..6925
                     /gene="pstC"
                     /locus_tag="VGA78_06350"
     CDS             5924..6925
                     /gene="pstC"
                     /locus_tag="VGA78_06350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEX9893524.1"
                     /translation="MSEPVGAVAEAAVPPSQPRIQTGLGGRSWADLGFRGVLTLGALA
                     VPLLMAFLVWELWVGSRLAIGRYGLDFLVSSAWDPVAQQFGAVPLIFGTLVSSLLALV
                     IAVPLSLGVAIFLTEFAPQAIRQPVAFLIELLAAIPSVVYGLWGIFFLIPFLREHIFP
                     FLRSALGFLPLFQGPIYGQSMLAAAIILAIMVMPYIMSVSREVLLAVPASQREAAQAL
                     GATRWEAVITAVVPYAKSGIIGAVILGLGRALGETMAVTMVIGNRHEIAASLFAPGYT
                     MAAAIANEFTEAVEDVHLSALTYVALVLFMVTVLVNAGARLLIWRVTRGAPTGGQGL"
     gene            6922..7767
                     /gene="pstA"
                     /locus_tag="VGA78_06355"
     CDS             6922..7767
                     /gene="pstA"
                     /locus_tag="VGA78_06355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEX9893525.1"
                     /translation="MKRRGLRRWISNGMVVIMAVAVVVAVMPLLLILGTLVVKGAGSI
                     NLAFFTQTPVPAGETGGGVAHAIVGTLMIVGAACVIGLPIGISAGIFCAEYPANPLAR
                     TTRFLADVMIGTPSIVVGLFAWTWIVARQRHFSGFAGSAALAVLMVPMVMRTTEELIK
                     LVPNSLREAALALGYPRWRTSLVIVVRTALPGIVTGVLLAVARVAGETAPLLFTALGS
                     QFMSTDLKAPLAALPLVVFTYATGPYEDWHRLAWATALVLIIVVMLLSIAARLATRQR
                     FDRKG"
     gene            7772..8527
                     /gene="pstB"
                     /locus_tag="VGA78_06360"
     CDS             7772..8527
                     /gene="pstB"
                     /locus_tag="VGA78_06360"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX9893526.1"
                     /translation="MTHLATEKLTAMYSKFTAVKNVSLTFPANHVHALIGPSGCGKST
                     LLRTLNRMHEMTPGGWITGKVLLDTEDIYAAGVNPMQLRRRVGMVFQKPTPFPTMSIY
                     DNVCAGLKVNGRPARKETREIVERALRRAALWEEVKDRLDQSAIALSGGQQQRLCIAR
                     SIAPEPQVLLLDEPTAALDPQATQRIEELVFELKRDYTIVIVTHNLQQAARVSDTTTF
                     LYLGHMIEHGPTRQLFTAPKNDQTEAYITGRFG"
     gene            8524..9369
                     /gene="pstB"
                     /locus_tag="VGA78_06365"
     CDS             8524..9369
                     /gene="pstB"
                     /locus_tag="VGA78_06365"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004060638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX9893527.1"
                     /translation="MTGLSVRPSIGPSLRPALAPRRAAQPAPDTSHPIIEARGFRFFY
                     GPSETLKGIDLAIAPRSVTAIIGPSGCGKSTFLRSINRLNDLIPGARYDGELLFNGSS
                     VFGFGTDLVQLRLRIGMVFQRPNPFPKSIFDNVAYGPGLNRLVSRRDLPDLVELCLRR
                     AALWDEVKDRLETPATGLSGGQQQRLCIARALGNQPEVLLMDEPCSALDPIATQKIEE
                     LIFELQKDYTIVIVTHNMQQAARVSAMTAFFDRGELIEYGSTEKIFMAPTKERTEAYI
                     TGRFG"
     gene            9366..10064
                     /gene="phoU"
                     /locus_tag="VGA78_06370"
     CDS             9366..10064
                     /gene="phoU"
                     /locus_tag="VGA78_06370"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEX9893528.1"
                     /translation="MNETHRHFHDELSQVKVRLLTMSGEAEAALGHAVEALLERDADK
                     AQRVIDGDRIIDMMEVEIEEQSINLLALQQPMARDLRTLTSAMKIATDLERVGDHAVN
                     IAQSAIRLAQTRPIAPEPEIVEMARMSREMLSDALEAFVRGDAQAGRAVCLRDDKVDA
                     LHDSVFRILLTHMMEDPHVIGAGMELFLVSRNLERVADLATNIGEDVVFLVEGKSIKH
                     RAEADDKSPAPAGT"
     gene            10168..11715
                     /locus_tag="VGA78_06375"
     CDS             10168..11715
                     /locus_tag="VGA78_06375"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX9893529.1"
                     /translation="MIAPPQSPRPERLGAIDVGSNSIRLLVADWDPRSGISVVDEVKD
                     QPRLAQGLAATGRLDREAMGRALDALERMNAVARRRGVSRLAAVATAAVREAENGEAF
                     VRQVQSRLGIPLTIIDPETEARLSYRSVAHHFRLENQRTIIADIGGGSLEVIGAVRGV
                     LDLTLSLPFGAVRLTELYLDGRKNPRRAVTNLRRKLSKPLRRSAPWKEWRGAQVVGSG
                     GSFTNLGRMAAARCGLDISAVHGTHVTTAEVEHLLDWLGSMSSAQRAEVPGLNPQRAD
                     IILAGLAVTAELLDQLDSPELVVSAYGLREGLLLEMIGLLQEPVDDPMRLAREFAERC
                     QCDMRHVEQVRRLALQLFDRLAEPLGALPPERPILEAAAILHDVGQLVSYRKRHRHSY
                     ELITHAERLGLSARERPLVALVARFHRKELPSRKHPEYAVQPDSDQLVVKRLAAMLRI
                     ADGLDRGYTSVVDRLRIRITQDRLRIGLVPKGRRSDLSLECWGAKRRVDLLEKLLQRE
                     VVIVPAG"
     gene            12008..14623
                     /locus_tag="VGA78_06380"
     CDS             12008..14623
                     /locus_tag="VGA78_06380"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HEX9893530.1"
                     /translation="MSRSLIIAATALASSLAAQQPPAPAPAGQAPRPGLRPFAEVTKD
                     AVVRRGFLDTYQKDDKLYLAIPRDRIGQDFLMEMKLAQGIGAAGLFGGTMLSLFEADV
                     VALERWGDQIFLVQKPHRFTATQDAAAARAVGLTFGPSVLESARIESWREDSAAVIDV
                     MNWFVSDFSSISQRVRLAAATGPGQPPPVTFDRQRSHLESVKGFPQNVNLRSRLTFRP
                     QNPVGFPSVPDGRYISLSIHYTMAALPAQPMTPRLGDDRVGSFMTVHKDFSQEDSTFF
                     VRYVNRWRLEPGEPVGDKRRPVTPITYYIDPNVPEPYRAAMKAGVEAWNTAYQAAGWV
                     GAIRALDLPADADPEDIRYATLRWNVSDQPGYGAIGPSTVDPRTGEILDADLLFEASM
                     FAGFRNAWRDLVRPFSAAEAFEQALGVGPFNHQDGSAELAGFIESFTAQGALLRAALL
                     ARGEIAPDQPVPERYVSEAVKWVTMHEVGHSLGLQHNFRSSASTPMDRLHDKSWADQN
                     GLYSSVMEYPTPNVAPKGKPNGYYYTPGVGSYDKWAISYAYVHDPAAAAALARQVADP
                     RHMYGTNAESGGPGALDPTITVFDLSDDPLAWATERTTLIRGLFATLPEQVLTDNRRY
                     YELSLAYQNLMNQYAQAVAPVIKYLGGQYLNRDHVGDPNGRPPFENIPRASQRAALEF
                     LVNRVFAPEALSLSPAVLQKFGSNRWLHWGTTNTWAGRLDFPYHEQVLGFQAAVLDQL
                     FNPFRLARIRDGETKYGAAGMVTIPELMGAVTRAVWTETMTRGAARNVNAIRRDLQRA
                     YLDRMTLLVVRPADRTPADARAVARMQLKDLDRRLAQAAAPATALDGYTRAHLDESRA
                     RIQKALTADLEAERR"
     gene            14620..>15107
                     /locus_tag="VGA78_06385"
     CDS             14620..>15107
                     /locus_tag="VGA78_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893531.1"
                     /translation="MTLATLVFVAAQQLAPCPTERFGTAAQCGSIQVAENPARPDGRK
                     IPIRFVVLRAQGQRLPEPVLLFNGGPGAASTDMAQLANGPFAPVRQERDFLLVDQRGS
                     GGSYPLMCVAGAAQRPALAFGHLYDPAFAARCRQDLEGTADLTLYTSDRVAEDLEQVR
                     RA"
BASE COUNT         2432 a         5132 c         5100 g         2443 t
ORIGIN      
        1 aggccgatca tggtggccat gccgatcagc ccgaccagcc gctccagcag cggggtgtcc
       61 agcccttcgc gcgcctgggc cagacgctcg gccgcggtct gcagcagaaa gagggcgctc
      121 atcgcagcgc ctccagctcg acctgcaccc gcgccaccag ctcccgtttc tcgggccagg
      181 ggagaaaggc gctctcgaat ccgttcagga tcatgcggtc gatctcctcg cgggtgcagc
      241 ccagctcggt atgcgccagc cagtactcat ccgacaacga cacgccgcac atgagccagc
      301 tatcggtgca gagcgtcagg ttcagcccgg cgtcgaggta gcggcgcacc ggatggtcgg
      361 cggcccgggc gaccgcgtgg gtctgcaagt tgctggtgat gttgatctcc atcgcgatgc
      421 gccggtcgcg cacgaagtcc tgcagcgcgg gcgcctcgaa caaccgggtg ccatggccca
      481 gccgcatcgc gtgacagcga tggatcgctt cggcgatcga ttccgggccc gccgcctcgc
      541 cggcgtgcac cgtgatgccg agcaggccgc cggccgcgac atcgaaggct gcggcgtgca
      601 ctccgggcat gcggccggct tcaccgccgg ccagatcgaa tccgaccacg ccctgggagc
      661 gggcgtccac gctgtggcgg gcgatcgcga gcgaccggtc cgccggatag tgccggagcg
      721 agcagttgat gatgccggtg cggactccga agtcccggct gccccgcgcc aggcccagcg
      781 cctcggcctc gatcacctga tcgagcgtga ggccacctcg ggtgctgagc cagggacagt
      841 accggacctc gagatagcgc aggttgtcgg ccgccccatc ctccaccatc tcataggcca
      901 cctgctcgat cgcctccggt gtctgcagca gcgcgatcgt cacctcgaaa cgggtgagaa
      961 actcttccag gttgtgggca tcatccaccc gcatgaagct ctgcagccgc accgggtcgg
     1021 tggtgggaag cgccacgccg gcggcccggg ccagctccac catggtggcc ggccggaggg
     1081 acccgtcgag atgcacgtgg agctcggcct tgggaagccg tccgatcaat tcacggctga
     1141 gcatccggct cccggctgcg gcgggcaggc acaaccaccc gaatgatcgc gcctgccggg
     1201 agaggctgat ccggcgtgac ccggatgccg cgtccgtcgg tcaggtatcc ctctcccgcg
     1261 gccacccggg cggccagggc gggatcgtgg gcccggaccg cggcgagcac ggcgctgccg
     1321 cgcggcaccc gcaccggacg ctcgttgacg aatgcggtca ccagctcgtt gtcaggactc
     1381 acggtagcgg gggaatctgg cgcgaagcca gagcttcggg aagtacaaac ggtcggtcgg
     1441 ttggtcaggt cggtctgtcg gtcgaccgac tgaccgtcgg accggccggc cgactggagg
     1501 cggttgcgga cgggcggatg tagatgtatt cgtttagccg aatatgcccg gcctgagtcc
     1561 ttccacactg ctgctcgcca tcgcggagcc cacccggctg cgcatcgtga actgtctggc
     1621 cgcagcaccg ctcttcgtct ccgacctgca ggtcattctc gagctgcccc aacccaccgt
     1681 ctcgcgccac ctcaccgtgc tgcggcacgc cgggatcgtg cgcgatacgc cggtggggca
     1741 gttcgtgctg taccgcttgt tccggcccgg ccgccacgaa cgactgctca acgccgttct
     1801 cgacggcctg gcgagcgaag aaaccatgaa actggagcga catcgtgcgc tcgaccgcag
     1861 ccgtgctcga ggggtggaac gatccgtccc ccgcctcgcg ccccgcgagc cctgaaagca
     1921 tgacccagcg gattctggtg gtagacgatg aacccgatat taccgcactg gtggcctatc
     1981 acctggccaa ggcgggctac cgggtctcca ccgcgtcgag cggagccgaa gccctccgcg
     2041 ccgcgcggga agagcggccc gatgtggtgg tgctggacct gatgctgccg ggcgtctcgg
     2101 ggtacgatgt gctgaccgaa ctccgcagcc gggaagagac tcgcgacgtg ggggtgatcc
     2161 tgctcaccgc ccggcgggaa gaaaccgatc gcatccgggg cctctcgctc ggcgccgacg
     2221 actacctcac caagccattc tcgccccagg agctgaccct gcgggtgggc gcggtgttgc
     2281 ggcggctgca ggctccggcg gtcgccggcg gcagttcgat caccgccggc cccctcacca
     2341 tcgaccggtc ggcgcaccgg gtgatgttcg agggccagga actgacattg acagcgaccg
     2401 agtacaagct cctgatgacg ctggtggagc ggcgcggccg agtgcagacc cggccccagc
     2461 tgcttgagac ggtctgggag gcccagcccg acatccagac ccgcacggtc gacatgcacg
     2521 tgcagcggct gcgcaccaaa ctgggtgagg ccggccgcat gatcgaaacg gtccgcgggt
     2581 tcgggtaccg cttccgaggg accgagagag ggagccgagc caggtgagag tcgcgggtcg
     2641 cctgctgctg gggatggtgg gcgttctcct cttcgcgatc gtcgtagtgg tctgggcgtc
     2701 ccgcaccgcg gtgcgccggc aactcgagca gcaactgcag gccgacctgg agggtcaagc
     2761 ccgcctgatt caggcggcgc ttcccgatga cccgggcgcg tggccccgcc tggtgggtcg
     2821 ctgggccgcg atgcgatctc accgggtaac cgtgctggac ccagagggtc ggccgctcgc
     2881 cgacaaccag atccctcccg gagtgctcgt caatcaaccg gccctggggg ggctccccga
     2941 agtacaggca gcggtcgcgg gacgagtggg ggtccaggtc cgctcggacg ccggcgagcc
     3001 cgctcgactc tgggtggcgg tgcccgggtc tcccatcgtc cgggtggcga gcgatctggc
     3061 gaccctggag accgcggcag gccgctccca tcgcgtgatc ctgtggggcg cgctgctggg
     3121 gctcggcgcc ggaacgctcc ttgccgttct ggccggccgc gccatcgcca atcccctgca
     3181 acagatcgcc gccgccgccc gggccattcc ctccggcctg ccgccccgat tcccccgctc
     3241 ccgcatcacc gagatcgatc agttgagcca ggccttacgg cagatgcacc aggagctggg
     3301 cgatcgcttc gaggcgctgc ggcggggccg agtggagtcg tcggccctgg tcgatgcgat
     3361 ggtggagggt gtcctcgcga ccgacaagaa agggcggatc gtaaccgcca accccgccgc
     3421 ccgccggatg cttggctaca ccgagaacca gctcatgccc gatctgccgg agctgttccg
     3481 cgccaaggca gcccgggagg tggtggacgc gagtatgcgg ggagagacgg tcgaagatcg
     3541 ggcgctggac ctggacgagc ggtcgttcct ggtcaactcc cggccgttgg cctcgggggg
     3601 cgccgtgctg gtgctgcacg atgtgaccga ggtgagacgt ctggaaacgg tgcggcgcga
     3661 cttcgtggcg aacgtctcgc acgagctcaa gaccccgctc acctccatcg cgggattcgc
     3721 cgagacgctg ctctcggagg atccggaccc gggcacgcgg cggctgtttc tccgcaccat
     3781 cctgagcaac tcgcaacgta tgcagcagct ggtggacgat cagctaaacc tctcccgcat
     3841 cgaatccggc gggtggcagc cccggctcga gaccctggag gtggccaaag cggtgcggga
     3901 ggcgtggcag ccccgggccg atcgcgcggc cgccagccgg atccagtttc tggtggacgt
     3961 gagcgaggcc gcccaggtca tccgggccga tcccgaggcg atgcgccaga tcctcggcaa
     4021 cctctacgac aatgccatcc ggttcactcc gcccggggga tcgattacca cccgcagctc
     4081 ggccgacgat ggcggggtga ccgtcgccgt cagcgacacc ggatcgggga tcggctccga
     4141 gcacttgccc cgcatcttcg agcggtacta ccgggtggat cagggtcgtt cgcgcgacgt
     4201 gggcggaacc ggtctcgggc tagcaatcgt caagcatctg gttgaagcgc acgggggccg
     4261 ggtgagcgcg gagagcgagc tgggacgggg cacgacgatc aagctgtggg ttccgtcgta
     4321 aggtgatgta gcaaccccgc tactccggcg gtatcgatcc gtgacacggg gaaaccagtt
     4381 tctcctcgtg aacatgctca ctccggtcct cacctgtgta ctgccccaat acctggacag
     4441 tgccgccgtc tccgccattc ggggcaacgc ggcgcttcac ccctccgccc attatctgat
     4501 cctcgaggcg gaccaggtga cccacttcga tccggtcggg gtcctgcggc tctgggattt
     4561 ctgccatgag cagctgagcc gcgggctccg ggtggagctg gtccacctgc atccggcatt
     4621 gtcccaccgg ctccgggctc atccgctgat ggagttcgtt gccgatggcg accgcatttt
     4681 ccaggatccc tttgcctccc tcgaggccag tcagcgctag accccgtaag tccggaaact
     4741 ggacaccggc atggggagag tgctcccaac ctcgttacgt tcgttacaca tccgtgacag
     4801 ttccgtgcat caaccgtgac cgccgacggg ctggtttcgg tcctaaagtc tggaggggtc
     4861 aatgcggaat ccagtcatgc gggccggggc ggcgctggca gcactcatag tggcggccgg
     4921 tccggcttgc tcccagagtc tggtaggggc cggggccaca ttcccttacc cgctgtacag
     4981 caagtggttc gacgcctaca acaagaaggc ccgggtccag atcaactacc agtcgatcgg
     5041 ctcgggcggc ggcatccggc agttcaccca gggaacggtg gacttcggtg ccagcgatag
     5101 tccgatgacg gacgaacaga tggccgccct caaggggaat gtggtccaca tccccaccgt
     5161 gctgggcgcg gtcgtgctga catacaactt gcccgccctg ggagccaccc cgctcaaact
     5221 ggacggggcg acgatcgccg acatcttcct gggcaaagtc acccagtgga atcatcccaa
     5281 gatcggggcc ctcaacccgg gggcgaacct ccccaagacc gacatcattg tggtgcatcg
     5341 ctccgacgga tcggggacca ctttcgtctt cgtggactat ctctccaagg tgtcgccgga
     5401 atggaagagc aaagtgggag cggcgacctc ggtgagctgg ccggtggggc tgggtggcaa
     5461 ggggaacgaa ggggtaactc agcaggtgaa acagaccgga ggctcgatcg gctatgtgga
     5521 gctggtgtat gccctctcca acaagctgcc ggtgtcgctg gtcaagaatg ccgcgggaca
     5581 gtacgcctcg gcctcgctgg aggccgtcac ggcggccgct gccggcgcca agcttgagaa
     5641 gggcacggat ttccgggtat cgatcaccaa cgcggcgggg gccaagtcgt acccgatcgc
     5701 atcgtacacc tggctgctgg tcaagaacga cacccccgac gccggcaagg ccaagtcgct
     5761 caaggacttt ctggcctgga tggtcacgcc ggaagcccag aagatggcgg cggatctggg
     5821 gtatgctccc ctgcccgacg acgtgtcggg cctggtccgg gagcgcatca agaccctgaa
     5881 gagcggcggg cgaccgatcg cctgagctcg ctggagccat cctgtgagcg agccagtagg
     5941 cgcggtggcg gaggccgctg ttccgccgtc gcaaccccgg attcagaccg ggctgggagg
     6001 ccggagctgg gcggatctgg gctttcgggg tgtcctgacc ctcggagctc tcgccgtccc
     6061 gctgctgatg gcgttcctgg tatgggaact gtgggtcggc tcccggttgg cgatcggacg
     6121 ctacggtctc gacttcctgg tttccagcgc ctgggatccg gtggcgcagc agttcggcgc
     6181 cgtgccgctc atcttcggga ccctggtgtc ctcgctgctg gcgctggtga tcgcggtgcc
     6241 gctctcgctc ggcgtcgcca tcttcctcac cgagtttgca ccccaggcga ttcggcagcc
     6301 ggtggccttc ctgatcgagc ttctggccgc gattcccagc gtggtgtacg gactgtgggg
     6361 gatctttttc ctgatcccgt tccttcggga gcacatcttt ccgttcctgc ggagcgcgct
     6421 cgggttcctg ccgctgtttc aaggaccgat ctacggtcag tcgatgctcg ccgcggccat
     6481 catcctggcc atcatggtga tgccctacat catgtcggtc tcgcgcgagg tgctgctggc
     6541 ggtgccggcc agccagcgcg aggcggcgca ggcgttaggc gccacccgct gggaggcggt
     6601 catcacggcg gtggtccctt acgccaagtc gggcatcatc ggcgccgtga tcctgggact
     6661 ggggcgggcc ctgggcgaga ccatggcggt gaccatggtg atcggcaacc ggcatgagat
     6721 cgccgcctcg ctcttcgccc ccggctatac catggcggcg gccatcgcca acgagttcac
     6781 cgaggcggtg gaagacgtcc acctgtcggc cctgacctac gtggcattgg tgctgttcat
     6841 ggtgacggtg ctggtgaacg ccggggcccg gctcctgatc tggcgggtga cccggggggc
     6901 tcccaccggg gggcagggtc tatgaagcgg cgggggctgc ggcgctggat cagcaacggc
     6961 atggtggtca tcatggcagt ggcggtagtc gtcgcggtga tgccgctgtt gctgatcctc
     7021 gggactctgg tggtcaaagg ggcggggtcc atcaacctgg ccttcttcac ccagaccccg
     7081 gtgcccgccg gcgaaaccgg cgggggcgtg gcccatgcca tcgtcggcac gctgatgatc
     7141 gtgggggccg cctgtgtgat cgggcttccg atcggcatct cggccgggat cttctgcgcg
     7201 gagtaccccg ccaacccgct ggccaggacc acccgtttcc tggccgacgt catgatcggc
     7261 acaccttcca tcgtggtcgg gctgttcgcc tggacctgga tcgtggcgcg gcaacggcat
     7321 ttctccggat tcgccggctc ggcggcgctg gcggtgctga tggtgccgat ggtgatgcgc
     7381 accaccgaag agctgatcaa gctggtgccc aactcgctcc gcgaggccgc gctggccctg
     7441 ggctaccccc gctggcgcac cagcctggtg atcgtggtgc gtaccgccct gccgggcatc
     7501 gtcactggcg tcttgctggc ggtggcccgg gtcgcgggcg agaccgcgcc cctgctgttt
     7561 accgccctag gcagccagtt catgagcacc gatctcaagg cgccgctggc ggccctgccg
     7621 ctggtggtgt tcacctacgc gaccggtccc tatgaagact ggcaccggct ggcctgggcc
     7681 acggcgctgg tgctgatcat cgtggtgatg ctcctgagca tcgcggcgcg gctggcgacc
     7741 cggcagcgct tcgaccggaa ggggtgagcc gatgacccat ctggccaccg agaagctcac
     7801 cgcgatgtac agcaagttca cggcggtcaa gaacgtgtcg ctgacgttcc ccgccaatca
     7861 tgtgcatgcg ctgatcggtc cctcgggctg cggcaaatcg acccttctcc ggaccctcaa
     7921 ccggatgcac gagatgaccc cgggtggctg gatcaccggc aaggtgctgc tcgacaccga
     7981 ggacatctat gcggcgggcg tcaacccgat gcagctgcgg cgccgggtcg gcatggtgtt
     8041 ccagaagccg actccattcc ccacgatgtc catctatgac aacgtgtgcg ccggcctcaa
     8101 ggtgaacggc cggccggccc gcaaggagac ccgggagatc gtggagcggg ccttgcggcg
     8161 cgcggcgctc tgggaggaag tgaaggaccg gctcgaccag agcgccattg ccctgtcggg
     8221 gggacagcag cagcggctct gcatcgcgag gagcatcgcg ccggagccgc aggtgctgct
     8281 gctggacgag cccaccgcgg cgctcgaccc gcaggcgacc cagcggatcg aggagctggt
     8341 cttcgagctc aagcgcgact acaccatcgt gatcgtcacc cataacctgc agcaggcggc
     8401 gcgggtgtcc gacacgacca ccttcctcta cctcggtcac atgatcgaac acgggccgac
     8461 gcggcagctg ttcaccgccc cgaagaacga ccagaccgag gcctatatca ccggacggtt
     8521 cggatgacag gactctctgt gcgaccttcc attggaccct cgctccggcc ggccctggcg
     8581 ccgcgccgcg ctgcccagcc ggcgccggac acgtcgcatc ccatcatcga agctcggggg
     8641 ttccgcttct tctacggtcc gtccgagacc ctcaagggaa tcgatctggc catcgcgccg
     8701 cgttcggtga cggccatcat cggcccgtcg ggctgcggca agtccacctt tctcagatcc
     8761 atcaaccggc tgaacgacct catcccgggg gcccggtatg acggtgagct cctgttcaac
     8821 ggaagctccg tcttcggctt cggcaccgat ctggtccagc tgcggctccg catcgggatg
     8881 gtgtttcagc ggcccaatcc gtttcccaag tccatcttcg acaatgtcgc ctacgggccc
     8941 ggactcaacc ggctggtgtc caggcgcgac ctgcccgacc tggtggagct gtgcctccgg
     9001 cgggcggccc tctgggacga ggtgaaggac cggctcgaga ccccggcgac cgggctctcg
     9061 ggcggacagc agcagcggct ctgcatcgcg cgggctctgg gcaaccagcc ggaggtcctg
     9121 ctgatggacg agccctgttc cgccctcgac ccgatcgcga cccagaagat cgaggagctg
     9181 atcttcgagc tccagaagga ctacaccatt gtcatcgtca cgcataacat gcagcaggcc
     9241 gcgcgggtgt cggccatgac cgcgttcttc gaccggggcg agctgatcga gtacggctcc
     9301 accgaaaaga tcttcatggc gccgaccaag gaacggaccg aggcctacat caccgggaga
     9361 ttcggatgaa cgaaacccac cggcactttc acgatgagtt gagccaggtc aaggtccggc
     9421 tgctcaccat gtcgggcgag gcggaggccg cgttggggca cgcggtcgag gcgctgctgg
     9481 agcgcgacgc cgacaaggcc cagcgggtca tcgacggcga ccggatcatc gacatgatgg
     9541 aagtggagat cgaagagcag tcgatcaatc tgctggccct gcaacaaccc atggcccgcg
     9601 atcttcgcac cctcacctcg gccatgaaga tcgccaccga cctggagcgg gtgggcgacc
     9661 acgcggtcaa catcgcccag tccgccatcc ggctggccca gacccggccc atcgccccgg
     9721 agcccgagat cgtggagatg gcccggatga gccgcgaaat gctttccgac gccctggagg
     9781 cgttcgtccg cggggacgcc caggccggcc gcgcggtctg ccttcgggac gacaaggtcg
     9841 acgcgctgca cgactccgtc ttccggatcc tgctcaccca catgatggaa gacccccacg
     9901 tgatcggcgc cggcatggag cttttcctgg tgagccggaa cctggaacgg gtggccgacc
     9961 tcgccaccaa tatcggggaa gacgtggtgt tcctggtcga aggcaagagc atcaaacacc
    10021 gggcggaggc ggacgataag tccccggccc cggctggcac ctgacacaaa cggtcgaagg
    10081 ccgtcgaagc gggtcgaaga cagtcgaagg gggcaaccgc gcggctttga ctatcttcga
    10141 ccatcttcga ccgccttcga ccgataagtg atcgccccac cgcagtcccc ccgccccgag
    10201 cgactcggcg ccatcgacgt cggctccaat tccatccggc tgctggtggc cgactgggac
    10261 ccgcgcagcg ggatctcggt ggtcgacgaa gtgaaggacc agccccggtt ggcccaggga
    10321 ctggcggcga ccgggcggct ggatcgcgaa gcgatggggc gcgcgctgga cgcgctggag
    10381 cggatgaatg cggtcgcccg gcggcgcggc gtgtcgcgtc tcgccgccgt agccaccgcg
    10441 gcggtccgcg aagcagaaaa cggcgaagcc ttcgtccgcc aggtccagag ccggctcggc
    10501 atcccactca ccatcatcga ccccgaaacc gaagcccggc tttcctaccg gtcggtggcg
    10561 caccatttcc ggctggagaa ccagcggacc atcatcgccg acatcggtgg gggcagcctg
    10621 gaagtgatcg gtgccgtgcg aggcgtgctc gacctgaccc tctcgctgcc gttcggcgcg
    10681 gtccggctca ccgagctcta cctcgacggc cgcaagaacc cccggagagc ggtcaccaat
    10741 ctgcggcgca agctgtcgaa acccctgcgc cgttcggccc cctggaagga gtggcggggt
    10801 gcccaggtgg tcggctccgg cggctcgttc accaatctgg gccggatggc cgcggcccgg
    10861 tgcggtctgg acatcagcgc ggtgcacggc acccacgtca ccaccgccga ggtggagcac
    10921 ctgctcgact ggctcggctc catgagctcg gcccagcggg ccgaggtgcc cgggctcaac
    10981 ccccagcggg ccgacattat cctggccggc ctggcggtca ccgcggagct gctggaccag
    11041 ctcgactcgc ctgagctggt agtgagcgcc tatggcctcc gcgaagggct gctgctggaa
    11101 atgatcgggc tgctccagga accggtcgac gatcccatgc ggctggcgcg agagttcgcc
    11161 gaacggtgcc agtgtgacat gcgccacgtc gagcaggtgc gccggctggc gctgcaactg
    11221 ttcgaccggc tggccgagcc cctcggcgcc ttgccgccgg aacggccgat tctcgaggca
    11281 gccgccatcc tgcatgacgt gggacagctg gtcagctatc ggaaacggca ccggcacagc
    11341 tacgagctga tcacccacgc cgagcggttg ggtctctcgg cccgggaacg gccactggtc
    11401 gcgctggtcg cccgcttcca ccgcaaggag ctgccgagcc ggaagcaccc cgaatacgct
    11461 gtccagcccg atagcgacca gctggtggtg aagcgactgg cggccatgct gcgaattgcc
    11521 gatggactgg atcgagggta tacgtcggta gtggaccggc tccgcattcg gatcacacag
    11581 gaccggctcc gaatcggatt ggtccccaaa gggcgccggt ccgacctgtc actcgaatgc
    11641 tggggggcga aacggcgagt ggacctgctc gaaaaactgc tccagcggga agtcgtgatc
    11701 gtccctgccg gctaacccaa tcaggaagca gggagtaggg agtagggagc agggagtagg
    11761 gagtagggag cagggagtag ggagtaggaa gtagggagta ggaagcaggg agcatggagc
    11821 agggagcatg gagcagggag ccctgctcct tctcctctga gttcccgctc cccgctccct
    11881 gctccctgct ccctgctccc tactccccgc tccctgctcc ctggactggt tgaaacccca
    11941 tcgccccaac agtcgaatgg tcgggggaca cccctccacg ctgcaatccc aagcaggagc
    12001 tcgatccatg tcacgatcgc tgatcatcgc cgccaccgcc ctggcttcgt ccctcgcggc
    12061 ccagcagccc ccggccccag cgcccgcggg gcaggcaccc cgccccggcc tgcgcccctt
    12121 cgcggaagtc accaaggatg ccgtggtccg gcggggattc ctggacacct accagaagga
    12181 tgacaagctc tacctggcca ttccccggga tcggataggc caggatttcc tcatggaaat
    12241 gaagctggcc cagggcatcg gcgcggccgg gctcttcggc ggcacgatgc tcagcctgtt
    12301 cgaggccgat gtggtggcgt tggagcgttg gggagaccag atcttcctgg tccagaagcc
    12361 ccaccggttc accgccacgc aggatgccgc ggcggcccgg gcggtgggac ttaccttcgg
    12421 cccgtcggtg ctggagtcgg cccggatcga atcatggcgc gaagactccg ccgcggtcat
    12481 cgacgtgatg aactggttcg tctcggattt ctccagcatc agccagcggg tacgccttgc
    12541 agcggccacc gggccgggcc agccgccgcc ggtcaccttc gaccggcagc gcagccacct
    12601 ggaatcggtg aagggattcc cccagaacgt gaacctgcgc tccaggctca ccttccggcc
    12661 tcagaacccg gtcgggttcc cgtcggttcc cgacggccgc tacatctcgc tctccatcca
    12721 ctacaccatg gcggcgctgc cggcccagcc gatgaccccc cgtctgggcg acgaccgggt
    12781 cggcagtttc atgacggtgc acaaggactt ctcgcaggaa gattcgacct tcttcgtgcg
    12841 ctacgtgaac cgctggcgtc tggagccggg cgagccggtg ggcgacaagc gtcggccggt
    12901 gactccgatc acctactaca tcgaccccaa tgttcccgag ccgtatcgcg ccgcgatgaa
    12961 ggcgggggtc gaggcctgga ataccgcgta ccaggcggcc ggctgggtcg gcgcaatccg
    13021 ggccctggat ctgccggccg acgccgatcc ggaagacatc cggtacgcca cgcttcgctg
    13081 gaacgtctcc gaccagcccg gctacggcgc catcggcccc tcgacggtgg acccgcgcac
    13141 cggggagatc ctggacgccg acctcctgtt cgaggccagc atgttcgccg gcttccgcaa
    13201 cgcatggcgc gacctggtgc ggcccttctc cgccgccgag gccttcgagc aggccctggg
    13261 cgtgggcccg ttcaatcatc aggacggctc ggccgagctg gcgggattca ttgaaagctt
    13321 cacggcgcag ggtgcgctgt tgcgggccgc cctgctggct cggggcgaga tcgcgcccga
    13381 tcaaccggtg cccgagaggt acgtctccga agcggtgaag tgggtgacca tgcacgaggt
    13441 gggtcacagc ctcggcctgc agcacaactt ccgctcctcg gccagcacgc cgatggatcg
    13501 cttgcacgac aagagctggg ccgatcagaa cggcttgtac agctcggtga tggagtaccc
    13561 gactcccaac gtcgcaccca aggggaagcc aaacgggtac tactacacgc cgggggtcgg
    13621 ttcgtacgac aagtgggcga tcagctatgc ctacgtccat gacccggccg ccgccgccgc
    13681 cctcgcgcgg caggtggccg acccgcgcca catgtatggg actaacgccg agtcgggcgg
    13741 ccccggggcg ctcgatccca cgatcaccgt cttcgacctg agcgatgatc cgctggcgtg
    13801 ggcgaccgag cggaccacgt tgatccgggg cctgttcgcg accctcccgg aacaggtgct
    13861 caccgataac cgccgctatt acgagctgag cctcgcctac cagaacctga tgaatcagta
    13921 cgcccaggcg gtcgctccgg tgatcaagta tctgggcggg caatacctca accgcgatca
    13981 cgtgggcgat cccaacggac ggcctccgtt cgagaacatc ccccgcgcca gccagcgagc
    14041 cgcgctcgag ttcctggtga atcgagtctt cgccccggaa gcgctctcgc tgtctccggc
    14101 tgtgctccag aagttcggct ccaatcgatg gctgcactgg ggcaccacca acacctgggc
    14161 aggacggctc gacttcccct accacgagca ggtgctcggt ttccaggcgg ccgtgctcga
    14221 ccagttgttc aatccgttcc ggctggcacg gattcgggat ggtgagacca agtacggtgc
    14281 ggccgggatg gtgacgattc cggaactgat gggcgcggtc acccgagcgg tctggaccga
    14341 gaccatgacc cggggtgcgg cccgcaacgt gaacgccata cggcgcgacc tgcagcgggc
    14401 ctatctcgat cgcatgaccc tgctggtggt tcgcccggcc gatcgcaccc cggccgacgc
    14461 ccgcgccgtc gcgcgaatgc agctcaagga tctcgaccgg cggctggccc aggccgcggc
    14521 gccggccacg gccctcgatg ggtacacccg ggcccacctg gacgaaagtc gcgcccgaat
    14581 ccagaaggcc ctgaccgcgg acctggaagc ggaacggcgg tgacgctcgc cacgctggtt
    14641 ttcgtggcgg cgcagcagtt ggcgccctgc ccgacggagc ggttcggcac cgccgcccaa
    14701 tgcggctcga tccaggtggc cgagaatccc gcccggcccg acggccggaa gatcccgatc
    14761 cggttcgtcg tcctgcgggc ccaggggcag cggcttcccg agccggtgct gctcttcaac
    14821 ggaggcccgg gcgcggccag cactgacatg gctcagctgg cgaacggccc gttcgctccg
    14881 gtgcgacagg agcgtgactt cctgctggtg gatcagcggg gcagcggcgg ctcctatccc
    14941 ctgatgtgcg tggcaggtgc cgcgcagcgg ccggccctcg cgttcggcca cctgtacgac
    15001 ccggcgttcg ccgcgcgttg ccgccaggat ctggagggca ccgccgatct cacgttgtac
    15061 accagcgacc gggtggccga ggatctggag caggttcggc gggcgtt
//
LOCUS       DASWKS010000213        24259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2332028, whole genome shotgun sequence.
ACCESSION   DASWKS010000213 DASWKS010000000
VERSION     DASWKS010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 24259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2332028"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VGA78_06390"
     CDS             <1..926
                     /locus_tag="VGA78_06390"
                     /inference="COORDINATES: protein motif:HMM:NF013593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein FtsH"
                     /protein_id="HEX9893532.1"
                     /translation="ILRVHTRKIPLAPDVRLDILAKGTPGLNGADLANLVNEAAVLAA
                     RKNKVLVEMNDFEEAKDKVMLGVERRSLQLTEDERRLTAYHEAGHAIVSLKIPGLDPL
                     HKVTIVPRGRALGLTTWLPEEDRHNYTKYWLEGRLACAFGGRVAEELVFGPEKVTTGA
                     TNDIEQATTLARRMVTQFGMSDRVGAIAVGDREQEIFLGREIAQRREISERLSEVVDA
                     EVKRFLDEAYDRARVILTDARPMLDAMAAVLLERETLDREEIDLLARGETLPPLPPPA
                     PPPPPAITPKLVQPQPVTGPLLGTPPKPAPA"
     gene            923..1684
                     /locus_tag="VGA78_06395"
     CDS             923..1684
                     /locus_tag="VGA78_06395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893533.1"
                     /translation="MTHTPLPGRAQRAVQGALLSHGWEGASSEAAVAGLEPWAHHVTG
                     LSSDQVEALLRSAPKFGVDLLTGDDWAILAATKSRLSAFARSWTLPPELHDLAVGLGT
                     GLPADPASGWRVGNRVIDLSTPVVVDRLPPGVVEIASDRAASLLNQAARRGEAGGGGI
                     LLTATDPANALLDLGAALEAVLVAGLDAETIALDPGWTPGRTPLAIFRRFGRPLVCST
                     DDPVIAALARIDGAQIFRTGQIDPVRRAVDLVDGG"
     gene            1712..4072
                     /locus_tag="VGA78_06400"
     CDS             1712..4072
                     /locus_tag="VGA78_06400"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEX9893534.1"
                     /translation="MTSDSLERPPYLVALAVAIVVLAGYVLTLAPSVTFWDAGEFIAV
                     SKTLGIPHPPGTPLFVLLSHVWALLIPFGEYAWRTNLLSAVCGAAGAGLWFLVAHEAL
                     AGIGQRLPAGQATLVRLGGAVSGAVIAAFGFTMWQNSNETEVYAIAVLTVAAVTWLAL
                     RWRAHRGTPAGSRMLLLALYLGGVSIGNHLLALLVGPALVVFLVLTLWRQAAEDRGEQ
                     QREWAEAGVVMGAWTLLIGAGLGNAGILIAGVVLYALALVFALRAGAGRFALIALALS
                     AVGVTTYLFLYIRAGQRPFISEADPSTFESLLAVIRRLQYGIRTPLDDPTELHGPDNT
                     GRTLTVIGLQLLNYLQYFDWQWAKGLVATVGAFPIRTLATLLFLSLGLRGFLAQREAD
                     RGSWWLLMTLFLTTGLGLVAYMNFKPGFSLGYDLYPQRDDHEVRERDYFFIASFLVWG
                     VWAGMGLAALARRLMLTLRHRGWAAGIVFSLAVLPFCLNFQAATRRHGADARLAGDFA
                     YDLLNSVPPYGVLFTFGDNDTFPLWWAQEVEGIRRDVTVICLALAQTDWYMRQLRENP
                     TRPFEPASAPPIWRNYPAIPRPSWPLHTMTDADIASAVPQYLPRDVTLRFGQHEVTLA
                     RGAVLSSNDFLSIRVLQENLGRRPLAWALSAAGNFYQLDHLLLQQGVALRLEPQPADT
                     TSGRYDLRRMLGAVLDLPVTDSLILGTYRYADLLTRGAAGLESTAGSTAATLGVVFTQ
                     MAFAYESRGDTAAAVRYLEPATRLSNNPALRQALDQLRAGLPANRP"
     gene            4130..4780
                     /locus_tag="VGA78_06405"
     CDS             4130..4780
                     /locus_tag="VGA78_06405"
                     /inference="COORDINATES: protein motif:HMM:TIGR00044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEX9893535.1"
                     /translation="MRETIARHQAIGGWRHQVNIVAVTKTHGPEAVRAAWEAGLGAVG
                     ENRVQEALAKMPAVSDVPVEWHLIGSLQRNKVKQVIGRFALVHGLDRAELAEEFRRRL
                     PPGTRQRVLVEVNCSGEAEKAGVLPQELPGLLEVLGQHDGLVVEGLMTMAPLTLDVTV
                     QRAAFRRLRDLRDEAERRGSRLPELSMGMSGDFPVAVEEGATLIRLGTILFGERAP"
     gene            4777..5292
                     /locus_tag="VGA78_06410"
     CDS             4777..5292
                     /locus_tag="VGA78_06410"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HEX9893536.1"
                     /translation="MTDETFHLTPHDVRAQEFHKILRGYDPMQVESFKQRVAEELDRL
                     LRERTAFDERVKNQIEQLRSFRERERAMNDALIAAQQLRSDIQAQADREAEVVLREAR
                     SEAARIVERAQEEEGMIRQRGESAMRQLSAYVASFRALLDRHANELAGLEAYLEHYQQ
                     APMDDRHRAAV"
     gene            5353..8532
                     /gene="ileS"
                     /locus_tag="VGA78_06415"
     CDS             5353..8532
                     /gene="ileS"
                     /locus_tag="VGA78_06415"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEX9893537.1"
                     /translation="MDEGGSTLLNGFPSWPDIPADQLERELLDTWRRERLFEQTQEQT
                     RTGLPFVFFEGPPTANGLPGIHHVPPRTIKDLVCRFRAMQGRQVTRKGGWDTHGLPVE
                     IEVEKRLQLKGKKDIEDFGVEKFNALCRESVFTYRDEWVAFSDRIGYWLDWDDAYITC
                     SNQYIESVWALLKRLWEKGLLTRGHRVLPYCPRCGTVLSSHELALGYEDVRDKAIYVT
                     FPLDDGTGRELVVWTTTPWTLPSNVAVAVNPDLEYGTFDVGGRRLVIAVERAEPVLKN
                     AEKAVETFPGSRLIGLRYRRPLDVVPWPEDSQHPMVTGGDFVTAEDGSGIVHLAPAVG
                     ADDYAVGQREGLAFLNPVAADGTFQGTTWPELEGRLVTADETNDLIIRKLKADGRHLR
                     TDQHQHSYPHCWRCQSKLIYYARASWFVRTSAVKDRLLALNREIAWQPPEVGTGRFGE
                     WLENNVDWALSRDRYWGTPLPVWVADDDPDHVEVIGSFAELAARVGRPLPPDFDPHKP
                     FIDQYAWPSPGGGTMRRTREVIDAWFDSGSMPYAQWHWPFENQEQFERHFPADFICEG
                     IDQTRGWFYSLLAIGATGFDQAAYRNVVVNELILDAQGQKMAKSRGNTVDPNSAIAEF
                     GADTIRLYLLAASEVWKPKRFDRRTIPDVAGGFLNTLRNTYSFFALYAGGRPDGLTDR
                     RTDGPTDLQPLDLWVRSQLQATVNDVVDAWESYQVTAGVKAIMRFVVDDLSNWYVRLS
                     RGRFWAPDREADPAAVDTLREALLTVSRLLAPAAPFASDWLHRSLTGTSVHLASFPSV
                     GAAGQDTLRSAMDAVRTLASLARAARDEASLRVRQPLARMRVAVPSAVRGPGLDGLLE
                     LLAQEVNVKAVEIVGSDAELVQLSGRPNFRSLGKRYGPQTPAAAAAVAKLETAELRRL
                     EAGEAVTLFDGEASWVYQPEDVAVERRVASDWLVATDGPFVAALDPALTPVLRREGLA
                     RELVNRIQRLRKDAGYEYTTRIQVAIDGGDAVRDAATVYREFLMGETLARDLSVGPPS
                     FGPDRLDEFVIDDHGAVIAVIRHDPGVHH"
     gene            8546..8935
                     /locus_tag="VGA78_06420"
     CDS             8546..8935
                     /locus_tag="VGA78_06420"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HEX9893538.1"
                     /translation="MTLTKKQLDHLGKRLQEERARVMKELGYYDESFNNTLQGSNGDL
                     SSYSFHMADQGTDTMEREKQFLFASQEGRYLWHVNQALRRLYGDPEKFGKCHQCGAEI
                     GFDRLDALPHARLCISCKEKEEDAKRR"
     gene            8919..9434
                     /gene="lspA"
                     /locus_tag="VGA78_06425"
     CDS             8919..9434
                     /gene="lspA"
                     /locus_tag="VGA78_06425"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:NF013421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX9893539.1"
                     /translation="MPSAGDRLPRYSGAAAGILGLDLLTKAVIERSFDHGRVVPVVGE
                     WLQLRLVYNPGAAFGLELGQHSRWIFLVIAVVAVMLLTRLAWTTAPGDRLRLLALGLV
                     AGGATGNLVDRVRSPLGVVDFLDVGVGAARWPTFNVADVGVTLGAVALAVSFWLEDAR
                     RARAQSTSSAG"
     gene            9391..10440
                     /locus_tag="VGA78_06430"
     CDS             9391..10440
                     /locus_tag="VGA78_06430"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX9893540.1"
                     /translation="MPAGLEPNRPPAPAEAALRLAFSVLAGGTERLDRFLADQMALSR
                     TRAAQLVAEKRVSVNGQPARASRLLVRGEEVVVDLPDAAPPRVLTPHAIPLTVVYEDE
                     HVLVIDKPAGLVVHPAPGHWDDTLVNALAARGTSLGGGIPGRPGIVHRLDRDTSGLLL
                     VARSDLAHRRLSAAIAARKVRRRYAALAWGHFEESRSTIEASIARHHTDRKRMGVNQT
                     GRPARTEVQVLARFLACDLVRLTLETGRTHQIRVHLQHVGHPVVGDPVYHGGGSRRIS
                     GAARQTADRLERATPRQALHAAELAFRHPITGKLVHCQSDWPADLQPALEAAAWPERV
                     AGTQPLSYLGFFGNV"
     gene            10433..10855
                     /locus_tag="VGA78_06435"
     CDS             10433..10855
                     /locus_tag="VGA78_06435"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX9893541.1"
                     /translation="MSDTSRVRLLVWRAGSARCAAPIERLREILLALPVTVLPGAPAA
                     VRGVANVRGTLVTVVDGRRLLGEPDDLAPETTVLVQLGNRAVGLAVDDVEDLVEVGDG
                     ALIPRGQDSTLGWDVRLPDGPPARLLDLDQLLDPLFRD"
     gene            10880..11242
                     /locus_tag="VGA78_06440"
     CDS             10880..11242
                     /locus_tag="VGA78_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9893542.1"
                     /translation="MGHTVLVCDDAIFMRTMISDILTQAGYEVVGEAETGSQAVERYR
                     ALKPDLVTMDIVMPDMSGIDAVREICKTDPDAKILMCSAMGQQALVVEAIQAGAKDFV
                     VKPFQPSRVLEAVQRLLG"
     gene            11245..13041
                     /locus_tag="VGA78_06445"
     CDS             11245..13041
                     /locus_tag="VGA78_06445"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEX9893543.1"
                     /translation="MSSSKYITLFIAESRDHLQQCNTHLLAWEREPSADQPIQGLFRN
                     VHTLKGMAATLGFARLANLAHAFEHVLAAVRDGAVAASAELIQVGFKVVDRLEQGVAL
                     AVEGRDDAIEDQELAAELAEWARPATGAFPVPPERTGGPAPEAGGVVVKISFRPGTAM
                     PGARAALVLRRAATLGPLSAVTPPEESWGNEAFEGDFACRIATGAPDDQIRERLSEVG
                     DVAEVAISRGPLASTAAPLARQVRVEQERLDRLVGLSGELSVAGHRLAAKTATLSHDT
                     DLIGDVERLERQLADLQEEVLRARMAPVGEIFERFPRAVRDLARQLDKQVTLDMDGSE
                     IELDRAILDELPDILLHLLRNAVDHGIEPPAARLAAGKPAQGRLVLRARRDRNTVVVT
                     VDDDGRGIDPEQVRARARELGWEDEVDLLRILGRPGFSTKREVTNVSGRGVGIDAVLH
                     RVRTIGGAAELKSTPGQGTSVRLRLPLTLAIVPALLVKVDQERYAVPLGFVVETARLQ
                     VSEAVGGALQYRGERLPIVDLGGRKTAARPGVILEVSGRQGALLVDTLLGQENVVVRP
                     VDAPRGLPRWVNGATILADGLPALILDPTGLV"
     gene            13134..13757
                     /locus_tag="VGA78_06450"
     CDS             13134..13757
                     /locus_tag="VGA78_06450"
                     /inference="COORDINATES: protein motif:HMM:NF016398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheC"
                     /protein_id="HEX9893544.1"
                     /translation="MQQEWVSLDERQRDALREVANIGAGHAATALSQMTDRVIMINVP
                     EVQIRRLEEVAELLGPPETQVAAIAMHMMGDLTGQSMVILPAAAAQTLCDLLLRRPPG
                     TTREFGVMEQSSLKETGNILTSAYLTALSDFMGMMLVPSIPSLVTDYVGAVLTTAHVN
                     FQRDRDVVFCVDTAFRVEGAREPLQGEFILLPDSASLTAIFDAIRLT"
     gene            14029..16671
                     /locus_tag="VGA78_06455"
     CDS             14029..16671
                     /locus_tag="VGA78_06455"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893545.1"
                     /translation="MLRSLARRIDPSDPGAHNNLGVLYYERGLHSEAIASFARALELD
                     PRMTVAQENLELVQRETGYYDQLVAELREQLQQDPQNEAARLELGKTYATLGHYDEAV
                     DQLEALQRQAPHDPSALVQLGLAEQGRGRQDRATAAFEQACALDPLSSVVRVHLGQSL
                     YNTGLYDQALLTLVDAVHLAPNNPQAHYLLGFVYGELGRHDEARAATRKAMELSPALG
                     SAHANLRVEKGRPAPRAAPEPQGDGPRLARGGRAHLNLGLAFRQRGYLAEALREYRLS
                     LEEGEDREATLQGLAEVHLLRRDFAPALELYETLLQRQPGNARLHNDKAVCLHQAGRR
                     EEAREQYRRATDLDPSNGLAWNNLGVVRAMEPDDQPALAAFQAALRVRPDLAAARLNL
                     ALLHAQRHRYQLAVDTYREVLRERPDHPVAWNGIGQVLMNLKQFTEARNAFARSVEAD
                     PESAIAHYNLGFCLSQLGQFDDALRETKRALELDPYYVPQRFTLTVDLQFEESEIPVA
                     ADLSADVGAVTLGDEFQFEAAALDQVFAELAPEEARPEAVSEADPFAVARDLLDKGLL
                     EAATAEVSQVIRRGGPVASGTTLLGRIFARRGLHGEALERFRAAQVDQPDSYEALLGE
                     TQTLTALGRGSDALEVAERLVAVSPGSGDALAARARARLLAGDRHGARIDVEEATRRL
                     PGRGDLLLLLGSVARQSGDRGGARAAYRSALQLDPALMQAWYELGAVEEELGDLAEAR
                     MAYRHAVGLLPTHLEATLALAFLLRREDHADEAVNLLVDYLLAEPIALPALTLLGQAL
                     LDTRRPEEAVVVFRRVLQYTSDDLSALFHLGVASARLRRYDDAVQAWERVVDVSPTGP
                     LAAMARQHARSARDLARILATPEG"
     gene            16673..17821
                     /locus_tag="VGA78_06460"
     CDS             16673..17821
                     /locus_tag="VGA78_06460"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX9893546.1"
                     /translation="MSIRGPLRELGIHDVFQLLDLSRKTGVLKVTSELRQNEGTIWFE
                     NGAVVAAGIRSNPHRIGELLLHAGKIREEDLLRANSMQQDGDIRRLGEILVTIGAISR
                     RDMEHLVRAQVEEVVFTVLSWSEGWFQFDEGVGSDIPRDASIRISTEAVLMEAARRID
                     EWSRIQSRIPHLGVVARLAPPTTEEPGSLTLRPFEWRVLAACDSVLDARAIARSLGAS
                     DFDVARTLFGLAAAGVIVLIDPATESAAVVPRQDPATLLGQAEGFLRQGDPAAARTLA
                     EAVAASYPGDARAPLQIGRAYLAEARYAEAEEALRDAARLDPASAPVLRLLAQCRAGL
                     GRFDEAMQAWSDWLLLPGRPAEEDRHLAAVVRLREAARVMAEGLRVTP"
     gene            17818..18591
                     /locus_tag="VGA78_06465"
     CDS             17818..18591
                     /locus_tag="VGA78_06465"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893547.1"
                     /translation="MTDDIPALTARLAAEPASLVFLDLGEALRRRGQLESALTVVSGG
                     SQRYPLLADAHDLLARIHADRGAGDAAFDAWTEALRHDPRHLGALRGLAYLAYRAGDF
                     ARAERHLVAALAIVPDDANAFSALARVRERRQSELPPPAPVPAPSDEPIESVLVDAQG
                     RRLSGTLSRRDGADGSDAVAAELVGVSREAARATRLLGLGNWRAVSIECAEVQFYIVP
                     PTPETMMLARTESATPAGRLALFAERSAAAARRWLERTA"
     gene            18588..18938
                     /locus_tag="VGA78_06470"
     CDS             18588..18938
                     /locus_tag="VGA78_06470"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEX9893548.1"
                     /translation="MSSQWSGLLEGITRVPGVRGALVVSAEDGLVVAESSMGDVDGGA
                     VAALAASLVVRLGRAVAALGHDAPRLVHLEAELGAVMATPAGSGLLLAAVADADANVG
                     LLRLALRDAAQRVA"
     gene            18938..19399
                     /locus_tag="VGA78_06475"
     CDS             18938..19399
                     /locus_tag="VGA78_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEX9893549.1"
                     /translation="MRALEPWVDPPLTEFLRESSARLVLLMTSSGQVVAQHGFTRSLD
                     VMSVAALGAAIVASTTELARIMGLPTLGNVVHQGGARGVLLAPFAMPEATWIALVVYG
                     DDTTIGLVQLFFNRLAGDLRLAAPGARVRAPILAERFEEELNSSLRTLFGR"
     gene            19402..20001
                     /locus_tag="VGA78_06480"
     CDS             19402..20001
                     /locus_tag="VGA78_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HEX9893550.1"
                     /translation="MPLVNFTAREITCKLVYCGPGRCGKTTNLQYVHGRVPAGRRGEM
                     LSLATHGDRTLFFDFLPLDLGKISGFSTRFQLYTVPGQIYYAATRRLVLQGADGVVFV
                     ADSQARRFDENLESLQDLQDNLLDQGVDVRAFPLVFQYNKQDLPSELILPPSSLDDSL
                     NFRGVPSFPADALRGSGVFETLRAISALVLERLSARVAT"
     gene            19998..21986
                     /locus_tag="VGA78_06485"
     CDS             19998..21986
                     /locus_tag="VGA78_06485"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEX9893551.1"
                     /translation="MSSGLDLSLGFGTLVTGAANQLAVSAARAMAESAQPPFNPLIIH
                     GGEGLGKTHLLHAIGLLRLDVEPRAVVRIGSWSELVDGWRSAQVGGRGREFLSPFVEC
                     GLLLLDDVHRLLERGEARQQLLDVLETRISAGRSTVLASRKSPAELIDADPAGARILA
                     TGLGVELNPPDSAMRWEIMARQSGEGGVGMTPAVLEEIAGLPFTSIRDLVSAARRLLA
                     FQAVSPTSLDPAQARVLITGVLDEPLPDTGVRTAAPEPARPPSEPRSPLAEESDEFGS
                     FLSDVVASVSQQVDRWRGRIADAMLRWQGEGYHTARLQALLDHELATQPEEMLHRFEA
                     DLDTLRRLEQEARELAPDIAAHEAFKDPDQLTLAQQLLDEARVRDLVSCLPQSQYRLD
                     DLVEGPSNRLALDTARGVAAEPGGGPNPLLVVGDSGVGKTHLLHGIGNALVEQEHRGV
                     VCVGAHGLEASLQEAADTDQLPAWRRRFRWASALLIDDVHLLAGRSEVQQELAGLLDH
                     LLSAGRQVVFSSAVPVAELTGLAPQLLARLAAGIVVEMPRPDHEVRLEIVARLLSATE
                     AADDAALAEYLAARPADGIRAVHATVQRVLRAAESGRSQLGLALARQVLDAPPRAAPR
                     QPASPPGILGPTVGGPRLREKLVDRWPHAGDRLIEDFR"
     gene            21986..23602
                     /locus_tag="VGA78_06490"
     CDS             21986..23602
                     /locus_tag="VGA78_06490"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX9893552.1"
                     /translation="MAIKGSLREAALPDVIQLLFLGRRTGCLAVADRQSHASVFFENG
                     WVIHAAIVNRRDRLGDMLVKSGRITPEQLAQAIQMQAMAHGRRLGVILRELGAITGEE
                     LAAAVHRQVEEAVYTLFTWTSGSFSFEPGVEPEPDADRVRIPPDALLLEGARRIDEWS
                     VIEKKIPSFDLVFARDRSQDGTPELDFSDAQRRILPLIDGRRDVRGLIDESGMSEYDT
                     CQALYGLLTAGLVHRVGTSSAPPPGRSVDLQIDEHRNLGIAFYRTAMLDEASREFRRV
                     AELRPSEGQAPFYLGLIAARQGRWAEAASLFRHAADRAGPRPAIVHNLGVALAEAGEP
                     DQAESRLADAAGRSPNDARTHLAWGIAALERGDAELGAVRLGRARELYGETVPALWYW
                     AATRAQALAGDLERALAVACEGAARYDHHPVLLNNQAVFLEASGDLAGAEAVLLTALG
                     ENPGLPQISKNLGDIYYRLGRFEEAWEAYHRAARLQPDLGDDLYFKLGNLALKRGDNA
                     AASAHWNRALELNPRHQLARANLQTVNQSA"
     gene            23599..>24259
                     /locus_tag="VGA78_06495"
     CDS             23599..>24259
                     /locus_tag="VGA78_06495"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX9893553.1"
                     /translation="MTLTDDPGFALLLQRLSGHRLPPLDMYKDRCLRRRLAVRMRACG
                     VTTLAAYARVLEQRPEEVSRLLATLTINVTQFFRNPEAWSRLAAELAEKAATPSAGFS
                     AWSAGCASGEEAYTLAMLLAAAWESAGAPAASRVRVDATDVDEACLATAGAGCYPVAS
                     FREAPPAMVERWTSLEGDRRRIVPPVRALVRVLRHDLGRDAPPAPPYDLVVCRNVVIY
                     FE"
BASE COUNT         3595 a         8061 c         8709 g         3894 t
ORIGIN      
        1 gcattctccg ggtgcatacc cggaaaatcc cgctcgcgcc cgatgtgcgg ctcgatattc
       61 tggccaaagg cacgcccggc ctgaacgggg ccgacctggc caacctggtt aacgaggccg
      121 cggtcctggc cgcacgcaag aacaaggtcc tggtcgagat gaacgacttc gaggaggcca
      181 aggacaaggt gatgctgggg gtggaacgac gcagccttca gctgaccgaa gacgagcggc
      241 gcctgaccgc gtatcacgag gctggacacg ccatcgtctc gctcaagatc ccgggactcg
      301 atccgctcca caaggtgacg atcgttcccc ggggccgagc cctgggcctc accacctggc
      361 tgccggagga agaccgtcac aattacacca agtactggct ggaaggccgg ctggcctgcg
      421 ccttcggcgg ccgggtggcg gaagagctgg tgttcggtcc cgagaaggtg accaccggcg
      481 ccaccaacga catcgagcag gccaccacgc tggctcgccg gatggtgacg cagttcggca
      541 tgagcgatcg ggtcggcgcc atcgcggtgg gcgatcggga gcaggagatc ttcctgggtc
      601 gcgagatcgc gcagcggcgg gagatctccg agcgactgag cgaagtggtc gacgccgagg
      661 tcaagcggtt cctggatgaa gcctacgacc gggcccgcgt gattctgacg gatgcgcggc
      721 ccatgctgga cgcgatggcc gcggtgctgc tggagcgcga gacgctcgac cgggaagaga
      781 tcgatctgct ggcgcggggc gagacactgc cgccgctgcc gccgccggca ccaccgccgc
      841 cgccggccat cacgcccaag ctggtccagc cccagccggt cacgggcccg ctcctcggca
      901 cgccgcccaa gcccgccccg gcgtgaccca tacgccgctg ccgggccgcg cccagcgcgc
      961 ggtccagggc gccctcctgt ctcacggatg ggagggcgct tcgtctgaag cggcggtggc
     1021 tgggttggag ccgtgggctc accacgtcac cggcctctcg tccgatcagg tggaggcgtt
     1081 gctgcgatcg gccccgaaat tcggcgtcga tctgctgacc ggcgacgact gggccatcct
     1141 ggcggcgacg aaatcgcggc tgtccgcctt cgcccgctcc tggacgcttc ccccggagtt
     1201 gcacgacctg gccgtcggcc tgggtaccgg cttgccggcc gaccctgcgt ccggttggcg
     1261 agtggggaac cgggtgatcg atctgtccac gccggtagtg gtcgatcgcc tcccgcccgg
     1321 tgtcgtcgaa atcgcctccg accgggcagc gtccctgctg aaccaggcag cacgaagagg
     1381 ggaggcggga gggggtggga tcctccttac cgcgaccgat ccggcgaatg cactgctgga
     1441 tctcggcgca gcgctggagg cggtcctggt cgcaggcctc gatgcggaga ccatcgccct
     1501 cgatcccgga tggaccccag gccggacgcc gctggccatc ttccggcggt ttggacggcc
     1561 gctcgtgtgc agcaccgatg acccggtgat cgcggccctg gcccggatcg acggagctca
     1621 gatattccgg accgggcaaa tcgatccggt tcgaagggcg gttgacctgg tggacggtgg
     1681 gtagaggatc cgacctacga actggcgacc agtgaccagc gactcgctcg aacgtcctcc
     1741 ctatctcgtc gcgctggccg ttgccatcgt cgtgctcgcg gggtacgtcc tgaccctcgc
     1801 cccatccgtc acgttctggg atgccgggga gttcatcgcg gtctccaaga ccctcggtat
     1861 ccctcatcct cccggcacgc cgctcttcgt cctgctgtcc catgtctggg ccctgctgat
     1921 ccccttcggc gagtatgcct ggcgcaccaa cctgctgagc gcggtgtgcg gcgccgcggg
     1981 agccggactc tggttcctgg tcgcgcacga agccctggcg ggcatcggcc agcgtctgcc
     2041 ggccgggcag gccaccctgg tccggctggg aggcgccgtt tccggcgccg tcatcgcggc
     2101 gttcggtttc accatgtggc agaactcgaa cgaaaccgag gtctacgcca tcgcggtgct
     2161 cacagtggca gcggtcacgt ggctggcgct ccggtggcgg gcccaccggg gcaccccggc
     2221 cgggtcccga atgctgctgc tggcgctcta tctcggcggg gtctcgatcg gcaatcatct
     2281 gctggcgctg ctggttggtc cggcgctggt ggtgttcctg gtcctaacgc tctggcgtca
     2341 ggcggccgag gaccgtggcg agcagcagcg ggagtgggcc gaagccggcg tggtgatggg
     2401 ggcctggacc cttctgatcg gcgcgggtct aggcaacgcc ggtattctga tcgccggtgt
     2461 ggtgctctat gccctggcgc tggtgttcgc cctccgggcc ggtgcgggcc gtttcgccct
     2521 catcgccttg gcgctgtccg cggtcggcgt cacgacctac ctgtttctct acatccgggc
     2581 cgggcagcgg ccgttcatca gcgaggccga tccctcgacc ttcgagtcgc tgctggcggt
     2641 gattcggcgg ctgcaatacg gcatccgcac tccattggac gatccgaccg agctgcacgg
     2701 gccggacaat accggccgga ctctgacggt gattggcctg cagctgctca actacctgca
     2761 gtacttcgat tggcagtggg ccaaggggct ggtcgccacg gtgggggcgt tcccgatccg
     2821 gaccctggcc acgctgttgt tcctctcgct cggcctgcgc gggtttctgg cccagcggga
     2881 agccgatcgc ggcagctggt ggctgctgat gaccctgttc ctgaccaccg gcctcggctt
     2941 ggtggcgtac atgaacttca aaccggggtt cagcctgggc tacgacctct atccccagcg
     3001 cgatgatcac gaggtccggg agcgggacta cttcttcatc gccagcttcc tggtctgggg
     3061 ggtgtgggcc ggcatgggcc tggccgcgct ggcccgccgg ctgatgctga cgttgcgtca
     3121 ccgcggctgg gcggcgggta tcgtgttctc gctggcagtg cttccgttct gcctgaactt
     3181 ccaggcagcg acccggcggc acggcgcgga cgcccgattg gcgggtgatt tcgcgtacga
     3241 cctgctcaac tcggtgccgc cgtatggtgt gctgttcacc ttcggcgaca acgatacctt
     3301 cccgctctgg tgggcccagg aagtcgaagg catccgccgc gacgtcactg tgatctgtct
     3361 ggcgctggcg caaaccgact ggtacatgcg gcagttgcgg gagaatccca cccggccctt
     3421 cgaaccggca tcggcccccc ccatctggcg gaactacccg gccatccccc gtcctagctg
     3481 gccgctccat accatgacgg acgccgacat cgcgagcgcc gtcccccagt atctgccccg
     3541 cgacgtcacc ttacggttcg gccagcatga ggtcacgctg gcgcgggggg ccgtgctgtc
     3601 cagcaacgac ttcctatcaa tcagggtgct gcaggagaac ctgggtcgtc ggccgttggc
     3661 gtgggccctc tcggccgcgg ggaacttcta ccagctggac catctgctgc tgcagcaggg
     3721 cgtggcgctg cggctggaac cccagccggc ggacacgacc tcgggccgct acgatctgag
     3781 gcggatgctt ggggccgtgc tcgacctgcc ggtgaccgac agcctgatac tcggcaccta
     3841 tcgctacgcc gatctgctta cccggggcgc ggccgggctg gagagtacag ccgggtcgac
     3901 cgcggcgaca ctgggggtgg tgttcaccca gatggccttc gcctacgagt cccggggtga
     3961 cacggcggcc gcagtccggt atctggagcc ggctacgaga ctgtccaata atcccgcact
     4021 ccggcaggcc ctcgaccagc tccgtgccgg gctacctgcc aatcggccct aaagcccagt
     4081 aaatttgagg gttatgaaat acggggggct tcccgagcgg gttcggtccg tgcgggagac
     4141 catcgcgcgc caccaggcaa tcggtgggtg gcgtcaccag gtaaacatcg tcgcggtgac
     4201 caagacccac ggccccgaag ccgtgcgggc ggcgtgggaa gccggcttgg gggcggttgg
     4261 ggagaatcgg gtgcaggaag cgctcgccaa aatgccggcc gtgtcggatg tgccggtcga
     4321 atggcacctg atcgggtcgt tgcagcgcaa caaggtgaag caggtgatcg gccggtttgc
     4381 actggtacac gggctcgatc gcgccgagct ggccgaggag ttccgccgcc ggctacctcc
     4441 cgggacccgc cagcgggtgc tggtggaagt gaactgctcg ggagaggcag aaaaggccgg
     4501 cgtgctgccc caggagctgc ccggcttgct ggaggtactg ggtcagcatg acggattggt
     4561 ggtggaagga ctgatgacca tggcgccgct caccctggat gtgacggtgc agcgggccgc
     4621 cttccgccga ctgcgggatc tgcgcgatga ggcggaacga cgtggatcgc gcctgccgga
     4681 gctctcgatg ggcatgtcgg gcgacttccc tgtcgcggtg gaagaaggcg ccaccttgat
     4741 acggcttgga accatcctgt tcggagaacg cgcaccatga ccgacgagac gttccacctc
     4801 acgccacacg atgtccgggc ccaggagttc cacaagatcc tgcggggcta cgacccgatg
     4861 caggtggaga gcttcaagca gcgagtggcg gaagagctgg accggctgct gcgggagcgg
     4921 accgcgttcg acgaacgggt gaagaaccag atcgagcagc tgcgctcgtt ccgcgaacgg
     4981 gagcgcgcca tgaacgacgc gctcatcgcg gcccagcagc ttcgttccga tatccaggcc
     5041 caggccgatc gcgaggccga agtcgttctg cgggaagccc gcagtgaagc ggcccggatc
     5101 gtggaacggg cccaggagga agagggaatg atccggcagc ggggcgagtc ggccatgcgt
     5161 cagctgtcgg cctacgtcgc cagcttccgg gccctgctgg accggcacgc caacgagctg
     5221 gcgggactgg aagcctattt ggagcactac cagcaggcgc cgatggacga tcgccatcga
     5281 gcggccgtct gaactaccgg tcgaaggccg tcgaaggcgg tcgaaggggt cgaaggaggt
     5341 cgaagccggt tcatggatga gggtggatcg acgttgctga acggctttcc cagttggccg
     5401 gacatcccag cggatcagct cgagcgggag ttgctcgaca cctggcgtcg ggagcgtctg
     5461 ttcgagcaga cccaggagca gacccgcacc gggctgccct tcgtgttctt cgagggaccg
     5521 cctaccgcca acggcctgcc cggcattcac catgtgccac cccgcaccat caaggatctg
     5581 gtgtgccgtt ttcgcgcgat gcaggggcgg caggtgaccc gcaagggcgg ctgggatacc
     5641 cacggcctgc cggtggagat cgaggtcgag aaacggctcc agctcaaggg caagaaggac
     5701 atcgaggact tcggcgtcga aaagttcaac gccctctgcc gcgagagcgt gtttacctac
     5761 cgcgacgaat gggtggcctt ctccgaccgg atcggttact ggctcgactg ggacgacgcg
     5821 tacatcacct gcagcaatca gtacatcgag tcggtgtggg ccctgctcaa gcggctgtgg
     5881 gagaaggggc tgctgacccg agggcatcgg gtgctgccct attgtccgcg ctgcgggacc
     5941 gtgctctcca gccacgagct ggcgttaggc tacgaagacg tccgcgacaa ggccatctac
     6001 gtcaccttcc cgctggacga cgggaccggc cgggagctgg tggtctggac cacgacgccc
     6061 tggaccctgc cgagcaatgt ggcggtggcg gtgaatcccg atctcgagta cggcaccttc
     6121 gacgtcggcg gtcgacgcct ggtgatcgcc gtcgagcgag cggagccggt gctcaagaat
     6181 gccgaaaagg ccgtcgagac gttccccggc tcacgcctca tcggcctgcg ctaccgccgg
     6241 ccgcttgatg tggtgccgtg gcccgaggac agccagcacc cgatggtcac cgggggcgat
     6301 ttcgtcaccg cggaggacgg ctccggcatc gtgcacctgg caccggccgt cggagccgat
     6361 gactatgccg tcggtcagcg cgagggcctc gccttcctca acccggtggc cgccgacggg
     6421 acctttcagg gcaccacctg gcccgagctg gaaggccggc tggtcaccgc cgacgagacc
     6481 aacgacctga tcatccgcaa gctcaaggcc gacggacggc atctgcggac cgatcagcat
     6541 cagcacagct atcctcattg ctggcgctgc cagagcaagc tgatctatta cgcccgcgcc
     6601 tcctggttcg tgcggacctc ggccgtcaag gaccggctgc tggcgctgaa ccgggagatc
     6661 gcctggcagc cgcccgaggt cggcaccggt cgcttcgggg agtggctcga gaacaacgtt
     6721 gactgggctc tctcgcggga ccgctattgg ggcactccgc tgccggtctg ggtggccgat
     6781 gacgatccgg accacgtcga ggtgatcggc agcttcgcgg agttggcggc ccgggtgggc
     6841 cggccgctgc cgcccgactt cgatccccac aagcccttca tcgatcaata cgcctggccc
     6901 tcgcccggcg gcgggaccat gcggcggacc cgggaggtga tcgatgcctg gttcgactcc
     6961 ggctccatgc cctacgccca atggcactgg cccttcgaga accaggagca gttcgaacgc
     7021 catttcccag cggacttcat ctgcgagggc atcgaccaga cccggggctg gttctattcg
     7081 ctgctggcga tcggagcgac cgggttcgac caggcagcct atcgcaacgt ggtggtcaac
     7141 gagctgatcc tcgacgctca aggtcagaag atggccaaga gccggggcaa taccgtggat
     7201 cccaactcgg ccatcgccga gttcggggcc gacaccatcc ggctttacct gctggcggcg
     7261 agcgaagtgt ggaagcccaa acgcttcgac cggcgcacca tcccggacgt ggccggcggg
     7321 tttctcaaca cgctccgcaa cacgtactcg tttttcgcgc tgtacgcggg cgggcggccg
     7381 gacggtctga cggaccggcg gaccgacgga ccgaccgact tgcagccgct ggatctctgg
     7441 gtccggtctc agttgcaagc cacggtgaac gacgtggtcg atgcctggga atcctaccag
     7501 gtcaccgcgg gggtgaaggc catcatgcgg ttcgtggtgg acgatctctc caactggtac
     7561 gtgcggctgt cgcggggccg gttctgggcg ccggaccggg aagccgatcc ggcggcggtg
     7621 gacaccctgc gcgaagcgct cctgacggtg agccggctgc tcgctcccgc cgcgccgttc
     7681 gcgagtgact ggctgcaccg ttccctcacc ggaaccagcg tgcacctggc gtcgtttccg
     7741 tcggtgggcg ccgccggcca ggataccctc cggtccgcca tggatgccgt ccggaccctc
     7801 gcctcgctgg cccgcgcggc ccgcgatgag gcctcgctcc gggtgcggca gccgctggcg
     7861 cggatgcggg tcgccgtgcc gtcagcggtg cgcgggccgg ggctcgatgg gctgctggag
     7921 ctgctggccc aggaggtgaa cgtcaaggcc gtggaaatcg tcgggtccga cgccgagctg
     7981 gtccagcttt ccgggcggcc taacttccgg agcctgggca agcggtacgg cccgcagacc
     8041 ccggcggccg cggcggcggt tgccaagctc gagacagctg agctccggcg gctggaggcg
     8101 ggagaggcgg tcaccctgtt cgacggggaa gcgtcgtggg tgtaccagcc cgaagacgtt
     8161 gcggtggagc ggcgggtggc gagcgactgg ctggtggcca ccgatggacc ctttgtggcg
     8221 gcactcgatc ccgcgctcac gcccgtgctc cggcgggaag ggctggcccg cgagctggtc
     8281 aaccggattc agcggctccg caaggacgcc ggctacgagt acaccacgcg aatccaagtc
     8341 gccatcgacg gcggcgacgc cgtccgcgac gcagccaccg tctaccgcga gtttctcatg
     8401 ggcgagacgc tggcacggga tctgagcgtg ggacctccat cgttcgggcc ggaccggctg
     8461 gacgagtttg tcatcgacga ccacggcgcc gtgattgcgg tcatccgcca cgatcccggc
     8521 gttcaccatt agcgaggacc tggttatgac tctgaccaag aaacagctcg accacctcgg
     8581 taagcggctc caggaagaac gagcccgcgt gatgaaggag ctggggtact acgacgagtc
     8641 gttcaacaac accctgcagg gctccaacgg tgatctctcg tcgtactcgt tccacatggc
     8701 ggaccagggc accgatacga tggagcggga aaagcagttc ctgttcgcat cgcaggaagg
     8761 gcgttatctc tggcacgtga accaggcgtt gcgccggctg tacggcgacc cggagaagtt
     8821 cggcaagtgc caccagtgcg gggccgagat cggcttcgac cggctggacg cgctgcccca
     8881 cgcccggctg tgcatctcgt gcaaggagaa ggaggaggat gccaagcgcc ggtgaccggc
     8941 tgccgcgcta ctccggcgca gccgcgggca ttctcggact ggacttgctc accaaggcgg
     9001 tgatcgagcg cagcttcgat cacggccggg tggtgccggt ggtgggagag tggctccagc
     9061 tgcggctggt ctacaatccc ggagccgcgt tcggcctgga gctgggacag cattcccgct
     9121 ggatttttct ggtcatcgcg gtggtggcgg tcatgctgct tacccgattg gcgtggacca
     9181 cggcgccggg cgaccggctg cgactgttgg cgctgggtct ggtggccggg ggagccaccg
     9241 gcaatctggt ggaccgggtc cgatcaccgt taggcgtggt ggattttctc gatgtcgggg
     9301 tcggcgcggc gcgctggcct accttcaatg tcgcggacgt cggggtgacc ctcggcgccg
     9361 tcgcccttgc cgtctcgttc tggctcgagg atgcccgccg ggctcgagcc caatcgacct
     9421 ccagcgccgg ctgaggccgc tctgcgcctc gccttctcgg tcctggccgg tggcaccgag
     9481 cgactggatc ggttcctggc cgaccagatg gccctgtcac gcacccgcgc cgcccagctc
     9541 gtcgccgaga agcgggtatc ggtgaacggc cagccggccc gcgcctcgcg gttgctggtc
     9601 cggggcgagg aggtcgtagt cgatctgccc gatgcggctc ctccccgcgt cctcacaccg
     9661 cacgccatcc cgctgaccgt ggtctacgag gacgaacatg tgctggtaat cgacaagccg
     9721 gcgggactgg tggtgcatcc ggcaccggga cattgggacg acaccctggt caacgcgttg
     9781 gcggctcgcg ggacctcgct cggtggcgga attccgggac ggcccggcat cgtacatcgg
     9841 ctcgaccggg atacctccgg cctgctgctg gtggcgcgaa gcgatctggc acatcggcgg
     9901 ttgtcggccg ccatcgccgc gcgcaaggtg cggcgccgtt acgccgccct ggcgtggggg
     9961 cacttcgagg aatcccggag caccattgaa gcgtcgatcg cccggcatca caccgaccgc
    10021 aagcggatgg gagtgaacca gaccggccgg ccggcccgaa ccgaagtgca agtcctggcc
    10081 cggttcctcg cctgcgatct ggtgcggctg accctggaga ccggccgcac tcaccagatc
    10141 cgggtccatc tccagcacgt cggccatccg gtggtggggg atccggtcta tcacggtggg
    10201 gggagccgcc ggataagcgg cgccgcccga cagaccgcgg accggctgga acgcgccact
    10261 ccccggcagg cccttcacgc ggcggagctg gcgtttcgcc accccatcac cgggaaactg
    10321 gtgcactgcc aaagtgactg gccggccgat ctccaacctg cgctcgaggc agccgcctgg
    10381 cccgaacgtg ttgctggcac gcaaccgctc tcctatcttg gcttcttcgg caatgtctga
    10441 cacctcccgc gtgcggctcc tagtctggcg cgcgggctcg gcgcgatgcg cggcgccgat
    10501 cgagcgcctg cgcgagattc tgctcgccct gcccgtcacc gtgcttccgg gagcgccggc
    10561 agcggtgcgt ggtgtggcga acgtgcgggg cacgttggtg acagtggtgg acggtcggcg
    10621 gctgctgggc gagccggatg acctggcgcc ggagaccacg gtgctggtgc agcttggtaa
    10681 tcgcgccgtc ggcctggccg tggatgacgt ggaagacctg gtcgaggtgg gcgacggcgc
    10741 gctcatccct cgtggccagg attcgacttt ggggtgggat gtacggctgc ccgacgggcc
    10801 gccggcccgg ttgctcgatc tcgaccagtt gctcgacccg ttgtttcggg actgaaccgg
    10861 cttcgatccg gaggacgaag tgggacacac cgtgctggtc tgtgatgacg ccatcttcat
    10921 gcgcaccatg atctccgaca ttcttaccca agccggctat gaggtcgtgg gcgaagcgga
    10981 gaccgggtcg caggcggtgg agcgctaccg ggcgctcaag cccgatctcg tcaccatgga
    11041 catcgtgatg ccggacatga gcgggatcga cgcggtgcgc gagatctgca agacggatcc
    11101 cgacgccaag atcctgatgt gcagcgccat ggggcaacag gctctggtgg tggaagccat
    11161 ccaggccggc gccaaagatt tcgtggtcaa gccgttccaa ccttcgcgcg tgctcgaggc
    11221 ggttcagcgc ctgctcgggt agtcgtgtcg tcctccaagt acatcacgct cttcatcgcc
    11281 gagagccggg atcacctgca gcagtgcaat acccatctgc tggcgtggga gcgcgagcca
    11341 tcggccgacc agccgatcca gggtctgttc cgcaacgtgc acaccctcaa aggcatggcc
    11401 gccaccctgg gcttcgcgcg actggcgaac ctggcgcacg cgttcgagca cgtgctggcc
    11461 gcggtgcggg acggtgcggt cgcggcctcg gccgagctga tccaggtcgg attcaaagtg
    11521 gtggaccggc tggaacaggg tgtcgccctg gcggtggaag ggcgggacga cgccatcgag
    11581 gaccaggagc tggcggccga gctggcggag tgggcgcggc cggccacggg agcgttcccg
    11641 gtgcccccgg agcgcaccgg agggccggca cccgaggccg ggggggtggt cgtcaagatc
    11701 tcgtttaggc cggggaccgc catgccgggg gcccgggcgg ccctggtgtt gcgtcgcgcg
    11761 gctacgctgg gcccgctgtc ggccgtaact ccgccggagg aaagctgggg gaacgaggcc
    11821 ttcgaaggcg atttcgcctg ccggatcgcg acgggcgcgc cagacgacca aatccgggag
    11881 cggctgagcg aggtcggtga cgtcgctgag gtggcgatct cgcgaggccc actggcgtcc
    11941 accgcggcgc ccctggcgcg ccaggtgcga gtggagcagg agcgactgga ccggctggtg
    12001 gggctgagtg gtgagttgtc ggtggcgggt caccggttgg cggccaagac ggcgaccctg
    12061 agccacgaca cggatctgat cggggacgtc gagcggctcg agcggcagct ggcggatctc
    12121 caggaggagg tgctgcgggc ccggatggcg ccggtgggcg aaatattcga gcggtttccc
    12181 cgggcggtgc gtgacctggc gcgtcagttg gacaagcagg taacgctgga tatggacggc
    12241 agcgagatcg agctggatcg ggctattctg gacgagctgc ccgacattct gctgcacctg
    12301 ctccgcaacg ccgtggatca cggcatcgag ccaccggccg cgcgactggc ggcgggcaaa
    12361 ccggcccagg gccggctggt gcttcgggcg cggcgtgacc ggaatacggt ggtggtgacg
    12421 gtcgacgacg acgggcgggg catcgatccc gaacaggtcc gggcccgggc ccgggagctg
    12481 gggtgggaag atgaagtgga tctgttacgg attctgggcc ggcccggctt cagcaccaag
    12541 cgggaagtca ccaacgtctc gggacggggc gttggtatcg atgcggtgct gcatcgggtg
    12601 cggaccatcg gcggcgcggc cgagctcaag tcgacgccgg ggcaggggac cagcgtccga
    12661 ctgcgcttgc cgctcacgct ggcgatcgtg ccggcgctgc tggtgaaggt ggatcaggag
    12721 cggtatgccg taccgctcgg gttcgtggtg gaaaccgccc ggctgcaggt ctcggaggcg
    12781 gtggggggcg ccctgcagta ccgaggggag cggctgccga ttgtcgacct gggcggtcgg
    12841 aaaaccgcgg cgcgccccgg cgtgatcctt gaggtctcgg gacgccaggg ggcacttctg
    12901 gtggatacat tgttggggca ggaaaacgtc gtggttcggc cggtggatgc gccgcggggc
    12961 ctgccccgct gggtcaatgg cgccacgatt ctcgcggatg gactgccggc gctgatcctc
    13021 gatccgacag ggttagtcta actgaacgtt ccggctgcca ccgggcaccg caggtagcac
    13081 ggtactcgaa acatggaact cggaaccggg aacccagtgt ggagcgagcc cccatgcaac
    13141 aagaatgggt gagtctggac gaacgccagc gagacgccct gcgggaagtc gccaatatcg
    13201 gggcgggaca cgccgcgacc gcgctgtccc agatgaccga ccgggtcatc atgatcaacg
    13261 tgcccgaagt gcagatccgc cggctggaag aagtggcgga actactgggg ccgcccgaga
    13321 cccaggtcgc cgcgatcgcc atgcacatga tgggcgatct caccgggcaa tccatggtga
    13381 ttctgcccgc cgccgcggcc cagaccctgt gcgacctgct gctccggcgt ccccccggca
    13441 cgacccgcga gtttggagtc atggagcagt cgtcgctcaa ggagaccggc aacattctca
    13501 cctcggccta cctcacggcc ctgagcgatt tcatgggcat gatgctggtc ccctcgattc
    13561 cgagcctggt gaccgactac gtcggcgcgg tgttgaccac ggctcatgtc aatttccagc
    13621 gcgaccgcga tgtggtgttc tgcgtggaca ccgccttccg ggtcgaaggg gcccgcgagc
    13681 cgttgcaggg cgagttcatc ctccttcccg attccgcttc gctgacggcg atcttcgacg
    13741 ctattcggct cacataggag tcccggttcc acgttccagg ttccacgtgc tgtgccgagt
    13801 gcggtgctgg gtgccatgtg gcaagtgcga cccctgtggg cgaccatcac gaggcgcgtg
    13861 ccgccggagg cattctgatg gcgcccgtca gccttgaatc ttatgccagg ttcacctggc
    13921 acctggcccc aggaaccccg cctggcccag cacccggtcc ccggaacgcg gaacccggaa
    13981 ccctccagac cagccatgtc cgtcgccccc tctgagcggg acctgtcagt gttgcgatcc
    14041 ctggcccgcc ggatcgatcc gtccgatccc ggggcccaca acaacctcgg ggtgctgtat
    14101 tacgagcggg ggcttcactc cgaggccatc gcgtcgttcg cccgggccct ggagctggat
    14161 ccccggatga ccgtcgccca ggagaacctg gagctggttc agcgcgaaac cggatactac
    14221 gaccagctgg tggcagagct gcgggagcag ctgcagcagg atccccagaa tgaagcggcc
    14281 cggctggagc tggggaaaac ctacgccacc ctgggccact acgacgaggc ggtggaccag
    14341 ctcgaggcgc ttcagcggca ggcgccgcac gatcccagcg cgctggtgca gctggggctg
    14401 gccgagcagg gccgaggccg ccaggatcgc gccaccgccg cgttcgagca ggcttgtgcc
    14461 ctcgacccgc tctccagcgt ggtgcgggtc cacctgggcc agtcgctcta caacaccggc
    14521 ctctacgatc aggcgctgct gaccctggtc gacgcggtcc acctcgcgcc taacaatcct
    14581 caggcgcact acctgctcgg cttcgtctac ggcgagctgg gccgccacga cgaagctcgc
    14641 gccgcgaccc ggaaggcgat ggagctgtcg cccgcgttgg gcagcgccca cgccaacctg
    14701 cgggtggaaa agggccgtcc cgctccccgg gccgcgcccg agccgcaggg cgacgggccc
    14761 cggctggcgc gcgggggccg ggctcatctc aatctgggac tggcgttccg gcagcgcggg
    14821 tacctcgcgg aagcgctgcg ggagtaccgt ttgtcgttgg aagaggggga ggaccgcgaa
    14881 gcgactctgc aggggttggc cgaagtacac ctgctgcgac gcgactttgc cccagcgctg
    14941 gagctgtacg agacgctgct gcaacgccag cccggcaacg cccggctcca caacgacaag
    15001 gcggtctgcc tgcaccaggc gggccggcgg gaagaggccc gggagcagta tcgccgcgcc
    15061 accgatctcg atccctccaa cggactcgcc tggaacaacc tgggggtggt gcgcgcgatg
    15121 gaaccggacg atcagccggc cctggccgcg ttccaggccg cactgcgggt ccggcccgat
    15181 ctggcggcgg cgcggctcaa cctggcgctg ctccacgccc agcggcaccg ttatcagctg
    15241 gcggtcgata cctaccggga ggtgctgcgg gagcggcccg accatccggt cgcgtggaac
    15301 gggatcggcc aggtgctgat gaatctcaag cagttcaccg aggcccgcaa tgccttcgcc
    15361 cgctcggtgg aagccgatcc tgagagcgcg atcgcgcact acaatctggg attctgcctg
    15421 agccagctgg ggcagttcga cgatgcgctg cgggaaacca agcgggcgct ggagctcgat
    15481 ccgtactacg tgccgcagcg ctttactctc accgtcgatc tgcagttcga agagtccgag
    15541 atcccggtgg cggcggacct gtccgccgac gtgggggcgg tgacgctggg agacgagttc
    15601 cagttcgaag ccgcggccct ggaccaggtc ttcgcggagc tggcgccgga ggaagcgcga
    15661 cccgaagcgg tttccgaagc cgacccgttc gccgtcgcgc gcgacctcct ggacaagggc
    15721 ctgctggagg ccgccaccgc ggaagtcagc caggtgatcc ggcgaggtgg tccggtggcg
    15781 agcgggacga cgctgctagg acggatcttc gcccggcgag gactgcacgg ggaggcactg
    15841 gagcggttcc gcgcggccca ggtggatcag cctgacagct atgaggcgct gttgggagaa
    15901 acccagacgc tcaccgccct ggggcggggc agcgacgcgc tggaggtagc cgaacgcctg
    15961 gtggcggtgt cgcccggttc gggtgatgcg ctcgcggccc gggcccgggc ccgactgctg
    16021 gcgggtgatc gacatggggc ccggatcgat gtcgaggaag ccacccggcg actgcccggc
    16081 cggggcgacc tgttgctgtt gctgggatcg gtcgcgcgcc agtcgggcga tcggggcggc
    16141 gcccgggccg cctaccgttc cgcgctgcag ctggacccgg cgttgatgca ggcgtggtac
    16201 gagctgggcg cggtggaaga ggagctgggc gatctggccg aggcccggat ggcctaccgg
    16261 cacgcggtcg ggctcctgcc cacccacctc gaggccaccc tggcactggc gttcctgctg
    16321 cggcgcgagg accacgcgga cgaagccgtc aatctcctgg tcgactacct gttggcggag
    16381 ccgatcgccc ttcccgcgct caccctgctg ggacaggcgc tgctcgacac ccggcgaccc
    16441 gaagaggccg tggtggtgtt tcgccgggtc ctgcagtaca cctccgacga tctctcggcc
    16501 ctgtttcacc tgggtgtggc gtcggcccgg ctgcgccgtt atgacgacgc ggtgcaagcc
    16561 tgggagcggg tcgtggatgt gagccccacc ggtccgttgg ccgcgatggc tcggcagcac
    16621 gcgcgctcgg cccgcgacct ggcccggatt ctcgcgacgc cggagggctg agatgtcgat
    16681 ccgggggccg ctgcgcgagc tggggatcca cgacgtgttc cagctgctcg atctgagccg
    16741 caagaccggc gtgctcaaag tgacgtcgga gctgcgccag aacgagggca ccatctggtt
    16801 cgagaacggc gccgtggtgg ccgcgggcat ccgcagcaac ccgcaccgga tcggcgagct
    16861 gctgctgcac gcgggcaaga tccgggaaga ggatctgctc cgcgccaact cgatgcagca
    16921 ggacggcgac attcgccgtc tgggtgagat cctggtgacc atcggcgcga tcagccggcg
    16981 ggatatggaa cacctggtgc gagcccaggt ggaggaagtg gtcttcaccg tcctgagctg
    17041 gtcggaaggg tggttccaat tcgacgaagg cgtggggtcc gacattcccc gcgatgcctc
    17101 catccgcatc agcactgaag cggtgctcat ggaagcggcc cgccgcatcg acgagtggtc
    17161 ccggatccag agccgcatcc cgcatctggg tgtcgtggcc cggctggcgc cgcccacgac
    17221 cgaggagccg ggatcgctga ccctcaggcc gttcgagtgg cgggtgctgg cggcctgcga
    17281 tagcgtgctg gacgcgcgcg ccatcgcgcg cagcctgggc gcctcggatt tcgacgtggc
    17341 gcggacgctc ttcgggctcg ccgcggcggg tgttattgtc ctgatcgatc ccgcgaccga
    17401 gtcggccgcg gtcgttccgc ggcaggaccc ggccaccctg ctgggacagg cggagggctt
    17461 tctgcgccag ggtgacccag ccgccgcccg cacgctggcg gaggccgtcg cggcgagcta
    17521 ccccggtgac gcccgcgctc cgttgcagat cggccgcgcc tatctggccg aggcccgcta
    17581 cgccgaagca gaagaggcct tacgcgacgc cgcccggctc gatcccgcat cggcgccggt
    17641 gctgcggctc ctggcacagt gccgcgcggg gctggggcgc tttgacgaag cgatgcaggc
    17701 ctggagcgat tggctgctgt tgccgggccg tcccgccgag gaggatcgcc atctggccgc
    17761 ggtggttcgg ctccgcgagg cggcccgggt gatggcggaa ggcctccgag tcactccatg
    17821 accgacgaca ttcccgcgct cacggcccga ttggcggccg agccggccag cctggtgttt
    17881 ctcgatctgg gcgaggcgct gcggcgccgg ggccagctcg agtccgctct gaccgtggtg
    17941 agcggcggat cgcagcgtta tccgttgctg gccgacgcgc acgacctgct ggcccggatt
    18001 cacgccgatc ggggcgcggg cgacgccgcg ttcgacgctt ggaccgaagc gttgcgtcat
    18061 gatccacgtc atctgggtgc tctgcgcggg ctggcgtatc tggcgtaccg ggccggagat
    18121 ttcgctcggg ccgagcggca cctggtggcc gcgctcgcga tcgtgcccga cgatgccaac
    18181 gcgttctccg ccctggcgcg ggtccgggag cggcgccagt cggaactgcc gccgccggcc
    18241 ccggtcccgg ccccatcgga cgagccgatc gaatcggtcc tggtggatgc ccaggggcgg
    18301 cggctgtccg gcacgctgtc gcggcgggac ggcgccgacg gctccgatgc ggtggccgcc
    18361 gaactggtcg gtgtctcccg tgaggcggcc cgcgccaccc ggctgctggg gctgggcaac
    18421 tggcgggcgg tgtcgatcga gtgcgcggag gtgcagttct acatcgtgcc gcccactccc
    18481 gagaccatga tgctcgcgcg caccgagtcc gccacgcccg cgggccggct ggccctgttc
    18541 gccgaacggt ccgccgcggc ggcgcggcgc tggctggagc ggaccgcgtg agctcgcaat
    18601 ggtcgggtct gctggaggga atcacccggg ttcccggagt acgcggcgcc ctggtggtct
    18661 cggccgagga cgggttggtg gtggcggagt catccatggg cgatgtggac ggtggcgcgg
    18721 tggccgcgct ggccgcgagc ctggtcgtgc ggttggggcg ggccgtggcc gccctggggc
    18781 atgatgctcc ccgcctggtg catctcgagg ccgagctcgg ggccgtgatg gcgacgccgg
    18841 cgggctcggg actgctgctc gccgcggtgg ccgacgcgga cgccaacgtg ggtctgctcc
    18901 gcctggcgtt gcgcgatgcc gcgcagcgag tcgcctgatg cgggccctgg aaccatgggt
    18961 cgatccgccg ttgacggagt ttctgcggga atcgtccgcc cggctggttc tcctgatgac
    19021 gtcatcggga caggtcgtag cgcagcacgg cttcacccgt tcactcgacg tgatgtcggt
    19081 ggccgcgctg ggcgcggcca tcgtcgcctc gaccacggag ctggcccgga tcatgggcct
    19141 ccctacgctg ggaaacgtgg tccaccaggg aggcgcgcgg ggcgtgctgc tggcgccgtt
    19201 cgccatgccg gaggccacct ggatcgcgct ggtggtgtat ggcgacgaca ccaccattgg
    19261 gctggtgcag ctcttcttca accggctggc cggcgacctg cgtctggcgg ccccgggcgc
    19321 gcgggtccgc gctcccatcc tggcggagcg gttcgaggaa gagctgaatt cgagtctccg
    19381 caccctcttc ggtcgctgag catgccgctc gtcaacttca cggcccgcga aatcacctgc
    19441 aagctggtct attgcggacc gggccgttgc ggcaagacca ccaacctgca gtatgtccac
    19501 ggccgggttc ccgccggccg ccggggcgag atgttatccc tggccactca cggggaccgc
    19561 accctgttct tcgatttcct gccgctcgac ctgggcaaga tttccggctt ctccacccgg
    19621 ttccagctct acaccgtgcc gggccagatc tactacgcgg cgacccggcg cctggtgctg
    19681 cagggcgccg acggcgtggt ctttgtggcc gacagccagg cgcgccggtt cgacgagaac
    19741 ctcgagagtc tgcaggattt gcaggacaac ctgctcgacc agggagtcga cgtgcgggcc
    19801 ttcccgctgg ttttccagta caacaagcag gatctgccgt cggagctgat cctgccgccc
    19861 agctcgctgg atgactcgct caacttccgg ggcgtgccca gctttcccgc cgatgccctg
    19921 cgcggcagcg gggtcttcga aacgctgagg gccatcagcg cgctggtcct ggagcggctg
    19981 tcggcccggg tcgcgacatg agctccggtc tcgatctttc gctcggcttc ggcacgctgg
    20041 tgaccggcgc cgccaatcag ctggcagttt cggcggcgcg cgccatggcg gaatcggccc
    20101 agccgccctt caatccgctg atcatccatg gtggtgaagg cctggggaag acccacctgc
    20161 tgcacgccat cggcctgctg cggctggacg tcgagccgcg ggcggtggtc cggatcggga
    20221 gctggagcga gctggtcgac ggctggcggt cggcccaggt cgggggacgg ggccgggagt
    20281 ttctgtcgcc ctttgtcgaa tgcgggctgc tgctgctgga tgacgtgcat cggttgctgg
    20341 agcggggcga ggcccggcag cagctgctgg atgtgctcga gacccggatc agcgcgggac
    20401 gctccaccgt gctcgcgtcc cgcaaatccc cggcggaatt gatcgacgcc gacccggccg
    20461 gggcccgcat tctagccacc ggactgggtg tggagctcaa cccgccggac tccgcgatgc
    20521 gctgggagat catggcccgc cagagcgggg aaggcggggt ggggatgaca ccggccgtgc
    20581 tggaggagat cgccggcctg cctttcacct cgattcgcga tctggtgagc gcagcccggc
    20641 ggctgctggc gtttcaggcg gtgagcccga cctcgctcga cccggcccag gcgcgggtgt
    20701 tgatcaccgg ggtgctggac gaacccttgc cggataccgg ggtgcggacc gcggcgcccg
    20761 aaccggcccg gccgccgagc gagccccgtt cgccgctggc ggaggagagc gacgaattcg
    20821 gatcgttcct gtcggacgtg gtggcgagcg tgagccagca ggtggatcgc tggcggggcc
    20881 gcatcgccga cgccatgctc cgctggcagg gcgaagggta tcacaccgcc cggctgcagg
    20941 cgctgctcga tcatgagctg gccacccagc cggaagagat gctgcaccgc ttcgaggccg
    21001 acctcgacac cctgcgccgg ctggagcagg aggcgcgcga gctggcgccc gacatcgcgg
    21061 cgcacgaagc gttcaaggat cccgaccagc tgaccctggc ccagcagctg ctcgacgaag
    21121 cccgggtgcg cgacctggtc tcctgtctgc cccagtcgca ataccggctg gacgacctgg
    21181 tcgaagggcc ctccaatcgt ctggccctgg ataccgcccg cggggtcgcg gccgaaccgg
    21241 gcggcgggcc caatccgctg ctggtggtgg gtgacagtgg agtgggaaag actcatctgc
    21301 tgcacggcat cgggaatgcc ctggtggagc aggagcaccg gggggtggtc tgcgtcggcg
    21361 cccacgggct ggaggcctcg ctgcaggagg cggccgacac cgatcagctc cccgcctggc
    21421 ggcggcgctt ccgctgggcc agcgcgctgt tgatcgatga cgtccatctc ctggccggcc
    21481 gatcggaggt gcagcaggag ctggccggcc tgctcgacca cctgctctcc gccggacgcc
    21541 aagtggtgtt cagctctgcc gtgccggtgg ccgagctgac cggcctggca ccccagctgc
    21601 tggcacggct cgcggccggg atcgtggtcg aaatgccccg gcccgatcac gaagtgcggc
    21661 tggagatcgt ggcccggctg ttgtctgcca ccgaggcggc cgacgacgcg gccctggcgg
    21721 aatacctggc ggcccggccg gccgacggga tccgggcggt ccacgccacg gtgcaacggg
    21781 tgctccgggc ggccgagagc ggacgcagcc agctgggatt ggccctagcg cggcaggtgc
    21841 tcgacgcccc gccccgagcg gctccgcgcc agccggcttc cccccccggg attctgggtc
    21901 cgacggtggg tgggccgcgg ctccgggaaa aactggtgga ccggtggccc cacgccggtg
    21961 atcggctgat cgaggacttc cgctgatggc catcaaaggc agtctccgcg aagcggccct
    22021 ccccgatgtc atccagctgc tcttcctggg ccggcgcacc ggttgcctgg cggtggcgga
    22081 tcgtcagagc cacgcctcgg tgtttttcga gaacggctgg gtcattcacg ccgccatcgt
    22141 gaaccggcgg gaccggctgg gcgacatgct ggtgaagagt ggacggatca ccccggaaca
    22201 gctggcgcag gccatccaga tgcaggcgat ggcccacggc cgccgcctgg gtgtcatcct
    22261 gcgggagctg ggcgccatca ccggagagga gctggccgcc gcggtccatc gtcaagtgga
    22321 agaggcggtc tacaccctgt tcacctggac cagcggcagc ttcagcttcg agcccggcgt
    22381 cgagcccgag ccggacgccg accgggtccg catcccgccc gatgcccttc tgcttgaagg
    22441 ggcccgccgg atcgatgaat ggagcgtgat cgagaagaag attccgtcgt tcgatctggt
    22501 gttcgcgcgg gaccggagtc aggacggcac gcccgagctc gatttcagcg atgcgcaacg
    22561 ccggattctg ccgctgatcg acggccggcg cgacgtgcgc ggtctgatcg acgagtcggg
    22621 tatgagcgag tacgacacct gccaggcgct ctacggtctg ctgaccgccg ggttggtgca
    22681 ccgggtggga acctcgtcgg cgccgccgcc cggccggtcg gtcgatctgc agatcgacga
    22741 gcatcgcaac ctcggcatcg ccttctaccg gaccgccatg ctcgacgagg cctcgcgtga
    22801 gttccgccgc gtcgcggagc tgcgtccgtc ggaaggccag gcgcccttct acctgggact
    22861 gatcgcggcc cggcagggac ggtgggccga ggcggcatcg ctgttccgcc acgcggccga
    22921 ccgggccgga ccccggccgg cgatcgtgca taacctgggc gtggccctgg ccgaagcggg
    22981 cgaaccggac caggccgaga gccgtctggc cgacgcggcc gggcggtcgc ctaacgacgc
    23041 gcggacccac ctggcgtggg gcatcgcggc gctggaacgg ggcgacgcgg agctgggagc
    23101 ggttcggctg ggacgggccc gcgagctcta tggcgaaacg gtcccggcgc tgtggtactg
    23161 ggccgcgacc cgggcccagg cactggcggg cgatctggag cgagccctcg cggtcgcatg
    23221 cgaaggcgcc gcccgctatg accaccaccc ggtcctgctc aacaaccagg cggtgtttct
    23281 ggaggcgtcg ggtgatctgg ccggggccga ggccgtgctc ctcacggcgt taggcgaaaa
    23341 cccgggactc ccccagatct ccaagaacct gggcgacatc tactaccgac tgggccggtt
    23401 cgaggaagcg tgggaggcgt atcaccgcgc ggcccggctc cagcccgatc tgggagacga
    23461 cctctacttc aagctgggca acctggcgtt gaagcggggc gataatgcgg ccgcctccgc
    23521 ccactggaac cgggccctgg agctcaaccc gcgccatcag ctggcccggg ccaacctgca
    23581 gacggtcaac cagtccgcat gaccctgacg gacgatcccg gattcgccct gctgctccag
    23641 cgcctctcgg ggcatcggct gccgccgctc gacatgtaca aggatcgctg cctgcgacga
    23701 cggctggcgg tgcggatgcg ggcctgcggc gtcacgaccc tcgccgcata cgcccgggtg
    23761 ctggagcaac gacccgagga ggtgtcgcgg ctgttggcga ccctcaccat caacgtcacc
    23821 cagttctttc ggaacccgga ggcctggagc cggctcgccg ccgagctggc ggaaaaagcc
    23881 gcgaccccgt cggcggggtt ttcggcctgg agcgccgggt gcgcctcggg ggaagaggcc
    23941 tacaccctgg cgatgctgct ggccgcggcc tgggagtctg ccggtgcgcc cgccgcctcg
    24001 cgggttcggg tcgacgccac cgatgtcgat gaagcctgtc tcgcgacggc gggagccggg
    24061 tgctatccgg tggcgtcctt ccgcgaggcg ccccctgcga tggtcgagcg gtggacgtcg
    24121 ctggaggggg accgccgccg gatcgtgccg ccggtccgtg ccctggtccg ggtgctccgc
    24181 cacgacctgg gccgggacgc cccaccggcg ccgccctatg acctggtggt ctgccgcaac
    24241 gtggtcatct acttcgagc
//
LOCUS       DASWKS010000214         1768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3414675, whole genome shotgun sequence.
ACCESSION   DASWKS010000214 DASWKS010000000
VERSION     DASWKS010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3414675"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..1415)
                     /locus_tag="VGA78_06500"
     CDS             complement(18..1415)
                     /locus_tag="VGA78_06500"
                     /inference="COORDINATES: protein motif:HMM:NF014697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00366 family protein"
                     /protein_id="HEX9893554.1"
                     /translation="MTSPASGPSPADPPTDRLSRVAALLGRLIPDALTTSIALLALVF
                     GVALVMGNPLAGTMDAYYRGLWMLLPFTMQMTLILVLSGTLGATPTFRRLVVALSRIP
                     RSSTQVLGLAILVTAGLSYLYWGLGLALGPMVAIHFAREAEAKGLAVDFPFLLAVVGA
                     ALSVWQFGLSASAPLLMNTPGHFLESTTGLMPLRTTIFSPAALAFVALFLLVLFGSAR
                     IMSPRRPTPISSFPDSFRLAEPLRPADPEPGTRPLEAVPSLSERIEGHSVPALLLGAA
                     LAGWIFYHFAVKGGGLELNSLNTVLLLFCLVLHRNVRNFSKGLQQAVLSVWPVVVLYH
                     LYAGVAGLIQFTSVGENFAAFFGGLSTGLTFPLLTALSAAVVSVFVPSSGGQWVIQGF
                     ITAKTAAAVGVTAQRGLLALSIGDHVGNLISPFWVVIAAGIARIDFRRFIGFNLAFAA
                     IWFGLGVLVFTFLPV"
     gene            1567..>1768
                     /locus_tag="VGA78_06505"
     CDS             1567..>1768
                     /locus_tag="VGA78_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893555.1"
                     /translation="MTRGLLLVLIVTLIQCTPAPSPERSGAAAYFDNSGREDVLSGGV
                     RLIPITTPKGTFRVWTKRIGNNP"
BASE COUNT          368 a          587 c          590 g          223 t
ORIGIN      
        1 gccttagtcc tgtagtttca gactggaagg aaggtgaaca ccagcacccc cagcccgaac
       61 cagatggcgg cgaaggccag attgaagcca atgaaccgcc ggaagtcgat ccgggcgatc
      121 ccggccgcga tgaccaccca gaagggcgat atcaggttcc ccacgtggtc gccgatgctg
      181 agcgccagca acccgcgctg ggcggtcacc ccgaccgcag ccgcggtctt cgccgtaatg
      241 aagccctgaa tcacccactg gccgccgctc gagggcacga agaccgagac caccgccgcc
      301 gagagcgcgg tgagcagcgg gaaggtgagc ccagtggaga gcccgccgaa gaaggccgcg
      361 aagttctccc ccacgctggt gaattgaatc agtccggcta caccggcata gaggtgatac
      421 agcaccacca ccggccagac cgagaggact gcctgttgca gacccttcga gaagttccgc
      481 acgttgcggt gcagcaccag gcagaacagc agcagcaccg tgttgagtga gttgagctcg
      541 agaccccctc ccttcacggc gaagtgataa aagatccatc ccgccagcgc ggcccccaga
      601 agcagcgccg gcaccgagtg gccttcgatc cgctccgaga gactcgggac ggcttcgagc
      661 ggccgggttc ccggctcggg atccgccggc cggagcggtt ccgccagacg aaacgaatcg
      721 gggaagctcg aaatcggcgt gggccgccgg ggcgacatga ttcgggccga cccgaacagc
      781 accagcagaa agagcgccac gaaggccagc gccgccggag aaaaaatggt ggttcgaagc
      841 ggcatgagcc cggtggtgct ctccaggaag tgacccggcg tgttcatcag gagcggcgcg
      901 ctggccgaga gcccgaattg ccacaccgag agtgcggctc cgaccacggc cagcagaaac
      961 gggaagtcga ccgcgagccc cttcgcctcg gcttcccgcg cgaagtggat cgccaccatc
     1021 ggccccagcg cgaggcccag tccccaatac agatacgaca gcccggccgt caccaggatt
     1081 gcgagcccca ggacctgggt actgctccgc gggatgcggg agagcgccac caccaggcgt
     1141 cggaaggtgg gcgtcgcacc cagggtgccg ctcagcacca ggatcagggt catctgcatc
     1201 gtgaacggca gcagcatcca caagccgcga tagtaggcgt ccatggtgcc ggcgagcggg
     1261 ttccccatca ccagcgccac cccgaacacc agggccagca gcgcaatgga ggtggtgagc
     1321 gcatccggaa tcaggcggcc cagcaaggcg gcaacgcggg agaggcgatc cgtgggcggg
     1381 tccgccgggc tcgggccgga agcaggagac gtcacgtcag gtgatccagg aacggaggag
     1441 gcgagatggt accccggagc acggtcgggc gccaatcggc gcctccggag gctcgcgcga
     1501 cggacggtcc ggcagcatta tccccctggc cggacattct cctcgcagct caataaggga
     1561 gcgacaatga cgcggggcct tttgctggtt ctgatcgtga cactgatcca gtgcacgccg
     1621 gcgccctcgc cggaacgctc cggtgcggcg gcgtacttcg acaactccgg ccgcgaggac
     1681 gtcctgagcg gcggggttag gttgataccg attaccacgc ccaagggcac cttccgggtc
     1741 tggaccaaac ggatcggcaa caacccga
//
LOCUS       DASWKS010000215         1817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2693943, whole genome shotgun sequence.
ACCESSION   DASWKS010000215 DASWKS010000000
VERSION     DASWKS010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2693943"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..933)
                     /locus_tag="VGA78_06510"
     CDS             complement(55..933)
                     /locus_tag="VGA78_06510"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX9893556.1"
                     /translation="MTDFTRVGVLGAGLMGSGIAQVSAVAGYPVLVRDVDQKALDRGR
                     QMIERSLAKFVEKGSLRGDQRDAALARLDFTTDLAALAQCDLVIEAVTEDLAIKNALW
                     SELGSACPAATIFASNTSSLPIVAMAMATGRPDRFVGLHFFNPVPLMALVEVVRAVGT
                     SSETVDRAMGFVRRLGKEAIAAKDSPGFIVNRLLVPYMVDAVRALERGVGSVADIDLG
                     MKLGAGHPIGPLALMDLVGLDTALRVSDIMFDEFREPQYAAPPLLRRMVMAGHLGRKT
                     GRGFYDYSVNPPVPTV"
     gene            complement(930..>1817)
                     /locus_tag="VGA78_06515"
     CDS             complement(930..>1817)
                     /locus_tag="VGA78_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893557.1"
                     /translation="DRRKVTEPPVPARIDRAALERILQRAAELQAQEHDVGEGLSSDE
                     VIALGKEVGIPGPLLRQAMLEERSRIAAATPEGLADELFGSDEVVAARVVRGTPEAAE
                     AALLEWMDKNELLVVQRQQPGRISWEKLTGVQAAMRRGISTFEGARARFMLVRTDVVR
                     ATITALEDGYCHVALAASLRGARASVLAGAGVMGGLGIASAGVLVALQAVWFLPLAPL
                     LGGSALAWALSRRHRPTVERTQLGLERALDHVEGHAIKPAHELPTRGHGLFELITGEV
                     RKAITSASVQPSRRQSRKP"
BASE COUNT          294 a          662 c          590 g          271 t
ORIGIN      
        1 tcaggatgac tggccgtcgg tccgtcggtc cgtccggccg gccgtcggtc cgagtcatac
       61 cgtcggcacc ggtggattga ccgagtaatc gtagaatccc cggcccgtct tccggcccag
      121 atgacccgcc atcaccatcc gccgcaggag gggcggcgcg gcgtattggg gctctcgaaa
      181 ctcgtcgaac atgatgtccg agacgcggag ggccgtatcc agtcccacca ggtccatcag
      241 ggccagcggg ccgatcggat gtccggcacc cagcttcata cccaggtcga tgtccgccac
      301 cgacccgact ccccgttcca gcgcccgcac cgcatccacc atgtagggca ccaacagccg
      361 gttgacgatg aagccgggac tatccttggc ggcgatggcc tccttcccga gccggcggac
      421 aaatcccatg gcgcgatcca ccgtttccga cgaggtcccg acggcccgta ccacttcgac
      481 cagcgccatc agggggaccg gattgaagaa gtggagtccc acgaatcggt cgggccgtcc
      541 cgtcgccatg gccatcgcga cgatcgggag gctcgaggtg ttggaggcga agatcgtcgc
      601 cgccggacag gccgagccca gttcggacca gagagcattc ttgatcgcga ggtcctcggt
      661 cacggcctcg atcaccagat cgcattgggc cagcgcggcc aggtcggtgg tgaagtcgag
      721 ccgcgccaac gccgcgtcgc gctggtcacc ccggagcgag cccttctcga cgaacttggc
      781 cagggagcgc tcgatcatct ggcgcccccg gtccagcgct ttctggtcga cgtcgcggac
      841 cagcacggga tagcccgcca ccgccgagac ctgggcgatg ccgctgccca tgagaccggc
      901 accgaggaca ccgacgcggg tgaagtctgt catggctttc gcgactgccg ccgggaaggt
      961 tggaccgatg ccgaggtgat agccttgcgc acttccccgg tgatcagctc gaagagaccg
     1021 tggcctcggg tgggaagttc atgggccggt ttgatcgcat ggccttcgac gtggtccagg
     1081 gcgcgttcca gtccgagctg ggtccgttcc accgtgggcc ggtgccgccg actcaaggcc
     1141 cacgccagcg cggatccgcc gagcagaggc gccagcggga gaaaccagac ggcctgaagg
     1201 gccaccagga ccccggcgct cgcgatcccc aacccgccca tcacgccggc gccggccagc
     1261 accgaggccc gggccccccg gagcgaggcg gcgagcgcga cgtgacagta gccgtcctcc
     1321 agcgccgtaa tggtggcgcg caccacatcc gtccgcacga gcatgaagcg ggcccgggcg
     1381 ccttcaaagg tggagatccc gcgccgcatg gcggcctgga ctccggtcag cttctcccag
     1441 ctgatgcggc ccggctgctg ccgctgcacc accagcagct cgttcttgtc catccactcg
     1501 agcaaggcgg cctcggccgc ctcgggggtg ccgcgcacca cccgggccgc caccacttcg
     1561 tcggatccga acaactcatc ggccagccct tcgggcgtcg cggccgcgat gcgactgcgc
     1621 tcctccagca tcgcctgacg cagcaggggg ccggggatgc ccacctcctt ccccagcgcg
     1681 atcacctcat ccgagctgag tccctcaccc acgtcgtgct cctgcgcctg cagctcggct
     1741 gcgcgctgga gaatccgctc cagcgccgca cggtcgatgc gcgcaggaac gggaggctcg
     1801 gtcacttttc gtcgatc
//
LOCUS       DASWKS010000216         8043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_473665, whole genome shotgun sequence.
ACCESSION   DASWKS010000216 DASWKS010000000
VERSION     DASWKS010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473665"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1673
                     /locus_tag="VGA78_06520"
     CDS             66..1673
                     /locus_tag="VGA78_06520"
                     /inference="COORDINATES: protein motif:HMM:NF012435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893558.1"
                     /translation="MSTSPKEEWGTRVGVILAVAGSAVGLGNFLRFPGQAAQNGGGAF
                     LIPYFCALLLLGIPLGWAEWAMGRYGGAKGFHSAPGIMGVIAGRAWGRYFGVIGALIP
                     LVVSFYYVFIESWTFGYFIKYLTGGVGVDPAASVANQTAASSSFYTQYTGAAADGALF
                     SGVSWLPLLSWVFVFTINIYFVYRGISKGIEKFCTWAMPAMAVCALIVLLRVLSLGTP
                     DPSTPDQNVVNGLAYMWNPDFSALGNFQTWLAAAGQIFFSISVGFGIILNYASYLKRR
                     SDVALSALTSTATNELFEVGFGGMITLTASFIFLGLSGTTAAVATGSFGLGFQTLPVV
                     FARMGGLGNLVGAIWFFMLFLAAVTSSLSMYQPAVAFLMEALGWTKARATTAMVFLGV
                     VGSGMTLWYTQNGVFWNTLDFWVGTFLIFVMAGLQAIAFAWFFGIDRGWKQIHEGGLI
                     RLPSVVKFILMYVSPLYLIIVFVGFCLQNLPTSAAAVAASPPARLALGLVAVVIVGMV
                     LAVRVGARRWRAAGMDLDNREPLPPLT"
     gene            1683..1817
                     /locus_tag="VGA78_06525"
     CDS             1683..1817
                     /locus_tag="VGA78_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893559.1"
                     /translation="MRLGGWILLLGSTALVWSLTIWCYYKVLTAPPEAFTKPPDSLGG
                     "
     gene            2003..2980
                     /locus_tag="VGA78_06530"
     CDS             2003..2980
                     /locus_tag="VGA78_06530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893560.1"
                     /translation="MRSLYFTLAFGPPIAGPAADTTAKPTITEFLIPRAGNFPHDPAV
                     GPDGIVWYTDQTNSFIGRLDPATGKITDFPTPTPNSGPHGIEVGPDGMVWYSAQRTGK
                     LGRLDPRTGQITEFPLPPETRHPHTPIVWHGKIWFTDANNNTYGVLDPATGQVRTFTS
                     ATPRSIPYGMRGAPDGSVWIALLGTNKLGRVDTATGAIREYVIPHPGARPRRLQVAPD
                     GIVWYTDFERGYLGALDPRTGTFKEWKSVSPGAGPYGIALGTDGRIWYNEAQSSLMIG
                     FDPRTEKMEAVAIPTTGPVVRHMVTDPVRKRVWLALSGTGRIGMLELGR"
     gene            complement(3102..4061)
                     /locus_tag="VGA78_06535"
     CDS             complement(3102..4061)
                     /locus_tag="VGA78_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893561.1"
                     /translation="MRSALWLMLCLGTGGAAAQGPINRDPAAARLVTDDIPRFWRAFE
                     GFTGASTRRDSLSLLFERYYLEASPGLEAFVRLRIGSPFELLESIRRRPRYYAAIRDN
                     SLKVASLEPRIRELFGRFQLAYADAVFPDVYFLIGRFNSGGTADRTALYIGTEFYSRS
                     PDTPVEELAAWERTVTRSLDLLPCIVLHELMHFQQMPLKGRRTLLAAAFREGAPDFLA
                     QQLCQGNINDAAHAWLRAEPGREAALWREFAAEMDNQTDPSRWLHNANNSGDRPADLG
                     YVIGFKIAEAYYRQASNKTQALADLIRAEDPAAILAASGYRPI"
     gene            complement(4064..4612)
                     /locus_tag="VGA78_06540"
     CDS             complement(4064..4612)
                     /locus_tag="VGA78_06540"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX9893562.1"
                     /translation="MPTYCDIAAGHPWHGPYHDREYGFPIRDDARLFERLELEINQAG
                     LSWLTILKKREAFRRAYDGFDLEIVAGYGARQKQRLLGDAGIIRNRLKIEAVVDNARR
                     ILELRASRGSFHRWLDSHHPRPKPEWVKLFKRTFRFTGGEIVGEFLISTGYLAGAHHP
                     SCPVFPRVLRRKPPWSNPPPSR"
     gene            4801..4935
                     /locus_tag="VGA78_06545"
     CDS             4801..4935
                     /locus_tag="VGA78_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893563.1"
                     /translation="MAILRQGFSWPLLMPLVAGLGFIWIGGWLWRVRRRLSEYDWSGM
                     "
     gene            5081..5863
                     /locus_tag="VGA78_06550"
     CDS             5081..5863
                     /locus_tag="VGA78_06550"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893564.1"
                     /translation="MSTTLTAVLPGRFVWHELMTSDPGAAKAFYTAVVGWGTQPWAQD
                     GSYTVWTNGEAPVGGLMALPDEVKAMGVPPNWLTYISVPDTDAYAKRVEELGGKTLKP
                     PTSLPNVGRFAVVADPQGAAFALYTSETPSLPDAAPTTGEFSWHELATTDYEAAFKFY
                     STLFGWVNTETMDMGPGGKYLMYGFTKELPLGGIYNKDAKVPVPNWLPYALVPDADAA
                     AATAEKLGGKVIVPPMEVPGGDRIAVVLDPQGAAFAVHSKKK"
     gene            complement(5942..6883)
                     /locus_tag="VGA78_06555"
     CDS             complement(5942..6883)
                     /locus_tag="VGA78_06555"
                     /inference="COORDINATES: protein motif:HMM:NF022664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HEX9893565.1"
                     /translation="MTTSVRVRTCLVMLAVLDLSLVLPAHAAAQAEGRGRGQEDRRNI
                     TCSSSGGYQRCSAPNGWRGARLVRQLSDAACTRGVTWGFERDYIWVTRGCRGVFDPGD
                     AVADNGERVNCASPGRYVRCPAETRRGVTLIRRLSDAPCVEGRSWGAESGFIWVNRGC
                     RAEFMVGRRGPGRPDREETVVCESSGGYHHCPVRFSERGARLVRQMSNAACTQGRSWG
                     FDRDGIWVDRGCRGIFEAGDASADPGERVTCSSDGRMRSCPANTSRGVELVRQLSDAA
                     CRAEISWGYERGFIWVDNGCRAEFKLGGGYSPIRRPR"
     gene            6957..7970
                     /locus_tag="VGA78_06560"
     CDS             6957..7970
                     /locus_tag="VGA78_06560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HEX9893566.1"
                     /translation="MKSIVHAAPGGPEVLELRDVPSVEPGPSQVRVRVHAAGLNRADL
                     LQRRGLYPAPPSWPADIPGLEYAGEVESLGPDASRWRVGDRVMGLVGGGAHAELVVIH
                     EEEALPVPEGLTMAEAAAIPESFLTGWDALVTRGRLAATERVLLHAVGSGLGTAMVQL
                     AKRLGASVAGTSRTAAKLERARSLGLDIGIDTSHQNFRDAMCEPAHLVVDVLGGPAFA
                     DNLAVLAPLGRLVLLGFLRGPLVETTLVPVLRKRLQVIGSVMRTRGLQERIGLVRAFE
                     AEVLPWFGTDQLLTDRRTDGQTDGLRPLHPVIGATFPMAAIAEAHRAMESNEPFGKIV
                     LTW"
BASE COUNT         1300 a         2541 c         2737 g         1465 t
ORIGIN      
        1 gccggaccgt aggttggggg cgctgtccgc gggaccgttc cttcctccag cctaacgagc
       61 gtggcatgag tacctccccc aaggaagagt ggggtacccg cgtcggtgtg atcctggccg
      121 tggccggttc ggcggtcggc ctgggcaact tccttcgctt tccgggccag gccgcgcaga
      181 acgggggcgg ggcgtttctg attccgtact tctgcgcgct gctcctactc ggcatcccgc
      241 tgggatgggc cgagtgggcc atggggcgct acggcggtgc gaaagggttt cactccgcgc
      301 ccggcatcat gggggtgatc gcgggtcggg cctggggacg ctacttcgga gtcatcgggg
      361 cgctgattcc cctggtggtg agcttctact acgtctttat cgagtcgtgg acgttcgggt
      421 acttcatcaa gtacctgaca ggcggggtgg gcgtcgatcc cgcggcgtcg gtcgcgaacc
      481 agaccgcggc ctcttcatcg ttctataccc agtacacggg ggcggcggcc gacggagcgc
      541 tgttcagcgg cgtcagctgg ctgccgctgc tgtcctgggt gttcgtcttc accatcaaca
      601 tctatttcgt gtatcgcggc atttccaagg gcatcgagaa gttctgcacc tgggccatgc
      661 cggcgatggc ggtttgcgcc ttgatcgtcc tgctccgggt cctgagcctg ggaacgccgg
      721 atccgtcgac gccggaccag aacgtggtga acgggctggc gtacatgtgg aaccccgact
      781 tttcggccct ggggaacttc cagacctggc tggccgcggc cggacagatc ttcttcagca
      841 tctcggtggg cttcggcatc atcctcaact acgcttcgta cctcaagcgg cgcagtgacg
      901 tggcgctctc ggcgctcacc tcgacggcaa ccaacgagct gttcgaggtc gggttcggcg
      961 ggatgatcac cttgaccgcg tcgttcattt ttctggggtt gagcggaacc acggcggccg
     1021 tggccaccgg gtccttcggt ctcggattcc agaccctccc ggtggtgttc gcgcgaatgg
     1081 gcgggctggg caacctggtc ggcgcgatct ggttcttcat gctgttcctg gccgcggtca
     1141 ccagctcgct gtcgatgtac cagccggccg tggccttcct gatggaggcc ctgggctgga
     1201 ccaaggcccg ggcgaccacc gccatggtgt tcctgggcgt agtgggatcg gggatgacgc
     1261 tctggtacac ccagaacggg gtcttctgga acaccctcga cttctgggtc ggcacgttcc
     1321 tgatcttcgt gatggcgggg ctacaggcga tcgccttcgc ctggttcttc gggatcgacc
     1381 gcggctggaa gcagatccac gagggcggcc tgatccggct gccgtcggtg gtgaagttca
     1441 ttctgatgta tgtgtcaccg ctctacctga tcatcgtgtt cgtgggattc tgtctccaga
     1501 atcttcccac gtcggcggcg gcggtggcgg cgtccccgcc ggccaggctc gccctggggc
     1561 tggtggcggt cgttatcgtg gggatggtgc tcgccgtccg ggtcggggcc aggcgctggc
     1621 gggccgccgg tatggatctg gacaaccgcg aaccgctgcc accactcacc taggaggagc
     1681 cgatgcgcct cgggggatgg attctgctgc tcggctcgac cgcgttggtg tggtccctca
     1741 ccatctggtg ttactacaag gtgctcacgg cgccgcctga ggcgttcacc aagccgcccg
     1801 actcgctcgg cggctgaaag gccattgagc gatttagcgg tttgacgatt cagcgatgcg
     1861 tgacgccact cgggccaatt cgctaaaccg ccagacgcta aaccgttgaa tgggccggta
     1921 tcccgatggg ccgcccgcgc gtcgcaacct gagggtgggc cgtcacgtag tgagatcacc
     1981 ccttcgaggt gcggagccac caatgcgctc gctctacttt accctggcgt tcgggccccc
     2041 tattgccggg ccggcagccg ataccaccgc caagccgacc atcaccgaat ttctgattcc
     2101 ccgggccggg aattttccgc acgatcccgc tgtcggtccc gatggaatcg tctggtatac
     2161 cgaccagacc aacagtttca tcggccggct cgatccggcg accggcaaga tcaccgattt
     2221 ccccaccccg acccccaact cgggaccaca tgggatcgag gtgggtcccg atgggatggt
     2281 gtggtattcc gcccagcgga ccggcaagct gggtcggctc gatcctcgca ccggccagat
     2341 cacggaattc ccacttccgc ccgagactcg tcatccgcac acccccattg tgtggcacgg
     2401 gaagatctgg ttcaccgacg ccaataacaa cacgtacggc gtgctggatc cggccaccgg
     2461 ccaggttcgc accttcacct ccgccacgcc acggtcgatt ccctacggaa tgcggggagc
     2521 gcctgacgga tcggtgtgga tcgccctgct cgggaccaac aagctgggac gggtcgacac
     2581 cgcgaccgga gccattcggg aatacgtcat tccgcatccg ggcgcgcggc cgaggcgact
     2641 tcaggttgct cccgacggga ttgtctggta caccgacttc gagcggggat acctgggcgc
     2701 gctcgatccg cggaccggca ccttcaagga atggaagtcg gtctctcccg gggcgggacc
     2761 gtacggcatt gcattgggaa ccgacggcag aatctggtac aacgaggcgc agtcgagctt
     2821 gatgatcggc ttcgatccca ggaccgagaa gatggaagcc gtcgccattc ccaccacggg
     2881 cccggtggtc cggcacatgg ttaccgatcc tgtccggaaa cgggtctggc tcgcgctgag
     2941 cggaacgggg cgaatcggga tgctggaact gggacgttag gcggagctca ggggcatttg
     3001 acgatttagc ggtttagcga tttgacgatt tgacgattac acagcggagc ttgacctgtc
     3061 gacctggcgc tccgcgccgt aatcgtcaaa tcgccccatc gttaaatggg ccggtatccg
     3121 ctggcagcca ggattgccgc cgggtcttcc gcgcggatga ggtccgccag cgcttgggtc
     3181 ttgttgctcg cctgccggta gtatgcttcc gcgatcttga acccgatcac gtagccgaga
     3241 tccgccggcc gatcgccgct gttgttggcg ttgtggagcc agcggctcgg gtcggtctgg
     3301 ttatccatct cggcggcgaa ttcccgccag agggccgcct cccgtcccgg ctcggctcgg
     3361 agccaggcgt gggcggcatc gttgatgttg ccctggcaga gctgctgcgc caggaaatcg
     3421 ggcgctcctt cgcggaaggc cgccgccagc agggtgcgcc gtcccttgag gggcatttgc
     3481 tgaaagtgca tcagctcgtg tagcacgatg cagggcagca ggtccagcga ccgggtgacc
     3541 gtgcgctccc acgccgccag ctcttccacc ggggtgtcgg gagagcggct gtagaactcg
     3601 gtgccgatgt agagcgccgt ccgatcggcc gtcccacccg aattgaagcg gccgatcagg
     3661 aaatacacgt cggggaacac cgcgtcggca taggccagct ggaacctgcc gaacagctcc
     3721 cggatcctcg gctccaggct ggccaccttg agactgttgt cgcggatggc ggcatagtag
     3781 cgcggccggc gccggatcga ttcgagcagc tcgaacggac tcccgatccg gagtcgaacg
     3841 aacgcctcca atccgggcga agcctcgagg tagtaccgct cgaacaacag actcaggctg
     3901 tcccgacggg tggacgcgcc ggtgaagccc tcgaacgcgc gccagaatcg gggaatgtcg
     3961 tcggtgacca gtcgcgcggc ggcaggatcc cgattgatgg gtccctgggc cgcggcaccg
     4021 ccggtaccga ggcagagcat gagccacaga gcggatcgca tcgtcatctc gatggcggcg
     4081 ggttcgacca gggcggcttg cgtcgcagca ctcggggaaa cacggggcaa ctcgggtgat
     4141 gcgctcccgc caggtaaccg gtgctgatca ggaattcccc cacgatttcg ccgccggtga
     4201 atcggaaggt ccgcttgaac agcttcaccc actccggctt gggacggggg tggtggctgt
     4261 cgagccagcg atggaacgag ccacgtgagg cgcgcagctc gaggatccgt cgtgcgttgt
     4321 ctacgacggc ttcgattttc aaccggtttc gaatgatgcc cgcgtccccc agcagtcgtt
     4381 gtttctggcg ggcgccgtag ccggccacga tttcgagatc gaacccgtcg taggcccggc
     4441 gaaaggcctc gcgcttcttg aggatcgtga gccagctgag ccccgcctgg ttgatctcca
     4501 gttccaaccg ttcgaagaga cgggcgtcgt cacggatcgg gaagccgtac tcccgatcgt
     4561 ggtagggccc atgccaggga tggccggccg ctatgtcaca ataggtgggc attgcgcttt
     4621 cgggctatgt tcggtacaat agagccccca agcggggctg cggtcaagcg ggacagcgag
     4681 taagcttgcc gggtgccaag gctccttcat ggggtggacc ggctgttggg ccgaatgctt
     4741 ggtcgagtac ttggagcagt atgtctcctg gccggtctta tggcgctcgc gtcgggtttc
     4801 atggccatct tgcgccaggg cttctcctgg ccgctcctca tgccgttagt cgccggcctg
     4861 ggcttcatct ggatcggcgg gtggctgtgg cgggtcaggc gacgcttgtc ggagtacgac
     4921 tggtcaggga tgtgacggtc gttctcaaag gaattcgctg caatccggaa tagaaatctg
     4981 ccggaaactc tgcctggtct tttcatcgta gggagctcat ctccagatcg tgacgttgac
     5041 gtcccatttt ccgtccttca attctccccg aggtggtatc atgtcgacga cgctgaccgc
     5101 tgtacttccc ggaaggtttg tgtggcacga actgatgact tccgatcccg gcgctgccaa
     5161 ggcgttctat accgccgtgg tgggatgggg cacgcagcca tgggcacagg atgggtcgta
     5221 cacggtgtgg acgaacggtg aggcgccggt cggcgggctg atggcgctgc ccgatgaggt
     5281 gaaggcgatg ggcgtgccgc ccaattggct gacctacatt tccgtccccg acaccgacgc
     5341 ctacgccaag cgggtggaag agctgggcgg caaaacgctc aagccgccga ccagcctgcc
     5401 caacgtcggc cgcttcgcgg ttgtggccga tccgcagggt gcggccttcg ctctctacac
     5461 cagcgaaacc ccctctctgc ccgatgccgc gcccaccacc ggcgagttct cctggcacga
     5521 gctggccacc acggactacg aagcggcttt caagttctat tcgacgctgt tcggctgggt
     5581 gaataccgag accatggata tggggccggg cggcaagtac ctgatgtacg ggttcaccaa
     5641 ggagctaccc ttgggcggca tctacaacaa ggatgcgaag gtcccggtgc ccaactggct
     5701 cccctacgcc ctggtgccgg acgccgatgc cgcggccgcg acggcagaaa agctgggcgg
     5761 caaagtgatc gtgccgccca tggaagtgcc gggtggcgat cgcatcgccg tggtgctgga
     5821 tccccagggc gcggcgttcg cggtccactc gaagaagaaa tagggtcagt cggtcggtcg
     5881 ggcagtcggt ccactgtccg tccgaccgcc cgactgtccg actgtccgac tgtccgaccg
     5941 tttaccgcgg ccttcgtatg ggcgaatagc cgccgcccag cttgaactct gcccggcagc
     6001 cgttgtcgac ccagatgaag ccgcgctcgt agccccagga gatctccgcc cgacatgccg
     6061 cgtcggagag ctggcggacc agctcgacgc cgcggctggt gttggcgggg cagctgcgca
     6121 tccggccgtc gctggaacag gtgacccgtt ctcccggatc ggccgaggcg tcgccggcct
     6181 cgaagatgcc gcggcacccc cggtcgaccc agatgccgtc gcggtcgaag ccccaggagc
     6241 gtccctgggt gcacgcggca ttcgacatct gccgtaccag ccgagctccc ctttcgctga
     6301 agcgaaccgg acagtggtga tagccgcccg aactctcgca caccacggtc tcttcccgat
     6361 caggacggcc gggcccgcgg cgtcccacca tgaactcggc gcgacagccc cggttgaccc
     6421 agatgaagcc cgactcggcg ccccagcttc ttccttcgac gcagggagca tccgaaagac
     6481 gccggatcag ggtgactcct cgacgggtct cggccgggca gcgcacatag cggccggggc
     6541 tggcgcagtt gacccgttcg ccgttgtccg ccaccgcatc gccgggatcg aagacaccgc
     6601 ggcaaccgcg ggtgacccag atgtagtcgc gctcgaagcc ccaggtgacg cctcgggtgc
     6661 acgcggcgtc ggacagctgg cggaccaggc gcgcgccgcg ccaaccgttg ggcgcggagc
     6721 aacgctggta gcctccggag ctggaacagg tgatgttccg gcggtcttcc tggcctcggc
     6781 cccgcccctc ggcctgtgcg gcggcatggg ccgggagaac gagggaaagg tccagcacag
     6841 ccagcatgac gaggcaggtg cggactcgga cggatgtcgt catcagaagg gctttctgtc
     6901 gagattccat cggtttatcg acggtaatcc actggaaaac gtaacgtacc gccagcatga
     6961 aaagcatagt ccatgccgcc ccgggtggcc ccgaagtcct ggaattgcgg gacgtcccat
     7021 cggttgaacc gggtccctca caggtccggg tgcgagtgca cgccgccgga ctcaaccgcg
     7081 ccgatctgct gcagcgccgg ggactgtacc cggcgcctcc ctcgtggccc gccgatatcc
     7141 ccggactcga atacgccggt gaagtcgagt cgctcggccc ggacgcatcg cgctggaggg
     7201 tcggcgatcg ggtgatgggg ctggtcggcg gcggggccca cgccgagctg gtggtgattc
     7261 acgaggagga agccctgcca gtcccggaag ggctgacgat ggcggaggcg gcggcgatcc
     7321 cggaatcgtt cctcaccggc tgggatgcgc tggtgacgcg gggacgactg gcggccaccg
     7381 agcgcgtgct gctgcatgcc gtcggcagcg gcctgggcac cgcgatggtg cagttggcca
     7441 agcggctcgg cgcgagcgtc gccgggactt cccgcaccgc ggccaagctg gagcgggccc
     7501 gcagcctggg gctcgacatc ggcatcgaca cgtcgcacca gaatttccgg gatgcgatgt
     7561 gcgaaccggc tcacctggtg gtcgacgtgc tgggcggccc ggccttcgcc gacaatctcg
     7621 cggtgctggc gccgctgggc cggctggtgc tgctgggatt tctgcggggc ccgctggtgg
     7681 aaaccaccct ggtgccggtg ctgcgcaaac gactgcaggt gatcggctcg gtgatgcgca
     7741 cccggggtct gcaggaacgg atcggattgg tgcgggcctt cgaggccgag gtgctgccgt
     7801 ggttcgggac ggaccaactt ctgacggaca gacggacgga cggacagacg gacggtctgc
     7861 gtcccctgca tccggtcatt ggtgcgacct ttcccatggc cgcgatcgcg gaggcacacc
     7921 gggcgatgga atcgaatgag ccgttcggga agatcgtcct gacctggtag gaagcaggga
     7981 gcagggagca gggagcagga ggcagggagt agggagcagg aagcagggag cagggagcag
     8041 gaa
//
LOCUS       DASWKS010000217         3958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3070373, whole genome shotgun sequence.
ACCESSION   DASWKS010000217 DASWKS010000000
VERSION     DASWKS010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3070373"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(348..1433)
                     /locus_tag="VGA78_06565"
     CDS             complement(348..1433)
                     /locus_tag="VGA78_06565"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HEX9893567.1"
                     /translation="MAVTLGDLRRFAVARSLFPPTTLQGALNRLGFVQADPIRAPARA
                     QDLTLRHRVREYRAGDLERLYPSLEVEEDVFVSYGFVPRPVHALMHPRRFRPAWSAGQ
                     NRRIEALLAFVRERGVTHPREADDHFAHGTVRNYWGGSSNATTHLLEAMHYRGLLRVV
                     RREKGIRMYAVREPVEVATNGGWQKRIDSLVDVAVGKYAPLPGPSLSSLVSRLRYAVP
                     QWQSELKAAGKRAKDRLARARVNGIDWYWPLDEEPRDSVAEETVRFLAPFDPVVWDRR
                     RFELLWGWEYRFEAYTPAAKRKLGYYALPLLWRDRVIGWVNLPPGDRELQADVGYVAG
                     RPPGDRGFKHQLLAELDRMHGFLGRTP"
     gene            complement(1530..>3958)
                     /locus_tag="VGA78_06570"
     CDS             complement(1530..>3958)
                     /locus_tag="VGA78_06570"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893568.1"
                     /translation="WLGAFWQDLVVGFRTLRKSPGFTLTAVLTLGLGTGAVAAMFSIV
                     NRVLLRPLPYAEPDRLVTIEERHERGSGSLPWANFLDLETHAGSFTAMASYGAWTATV
                     VGTGQPLRVRIGAVSAGFFKVFPLRPELGHLPVADEHRLGASPVAVVSHAFWRDALGS
                     PRSLEGIRLKLGWDLQVIGVLPPGFDFPERAEIWAPLELMEQSLSRTSHNWDVVGRLR
                     PGVAPEAAARELDNILAALRPVYSGDFDATGSLVTGLQQAETGGLARPLWLLLAAAGL
                     FLLAACSNLASGILARGTARLGELTVRSALGATRVRLARQLLTESALLAGLGAATGLG
                     LALFLLRTLTPLAPAGLRMDRVGIDGWVAVFALAVAVATTLLFGLFPAFRLSATSTVT
                     TLREAAVGMASARRMRAWNVLVAAEVALAVALLSGSVLLIKSFDRVMQTELGFDPQGA
                     VALAVDLPSVNYPGRSARISAFHLAALERITAVPGLTAAGFVNVPPLFGNGPSGSMVV
                     EGKPFEPGGRYSGYSIYRVIGGDYFRAMGMPLLKGRAFGLGDDERAPKVVIVDEAFAK
                     QEWPGENPLGKRVKPAGMDSNSEDDAEPWFTVIGVVPSVRSSSITAAFRPTYYFDHRQ
                     RPPYRTASVTYVARTGVAPAGTFAALRQAIRAVDPEVPAVLRTMDELVLGTVADKRFT
                     MLVLGTFGALALLLAVVGIYGVVSYAVAQRTREIGVRRALGATPGRVRTLVLGTTLAA
                     VVPGLAVGAVLTLVSSRALGALLYGVSPFDPPTLALAVGALGVAALLASLVPAWRAVR
                     VDPLIAMRAE"
BASE COUNT          681 a         1446 c         1283 g          548 t
ORIGIN      
        1 acgactttgc gaagtcgaac catcgatgtg tttccaatgg cgtgaagaat gtccatggcc
       61 ttcgttcctc ctctgctggc taggggaccg ggtcgcctca tcgtctcaac cggccggtgc
      121 tgctgagtgg gagcctgagc gaggccgggt cctttgaagg gcgcaccctc tctgtcgagg
      181 tggcgctcga gagcggcgct tcgtccacag ccggcagcgc gtgactttgg caagttcgtc
      241 ggcttcactg cggcgggcgt ggcggccacc gcgactcagt ggcgcctggt cctcccggac
      301 cgacaatcac cgggatggcc ctctggttgc agcgaccgcg agaccgttca aggagttcga
      361 ccgaggaacc catgcattcg atccagctcg gccagcagct ggtgcttgaa cccccggtcc
      421 cccggcggcc gccccgcaac gtacccgacg tccgcctgaa gctcgcggtc gccgggtggt
      481 agattgaccc acccgatgac ccggtcccgc cacagcagcg gaagcgcata gtatcccagc
      541 ttccgcttgg cggcaggggt gtaggcttcg aaccgatact cccaccccca cagcaactcg
      601 aagcgacggc ggtcccacac caccgggtcg aacggggcca ggaagcgaac ggtctcctcc
      661 gcaacactgt cccgcggctc ctcatccaga ggccaatacc agtcgattcc gttcacccgg
      721 gcccgagcga gacgatcctt ggcccgtttc ccggcagctt tcagctcgct ctgccactgc
      781 ggcacggcat accggaggcg gctcaccaag ctcgacaggc tgggacccgg cagcggggca
      841 tacttgccga ccgccacatc gaccagcgag tcgatccgct tctgccagcc accgttggtt
      901 gctacctcga ccggctcccg gaccgcatac atacgaatgc ccttctcccg ccggactacc
      961 cgcagcaacc cacggtagtg catggcttcc agaagatgag tcgtcgcgtt ggacgaccca
     1021 ccccagtagt tcctcaccgt cccgtgcgcg aagtgatcgt ccgcctcgcg cgggtgcgtg
     1081 acaccacgct cgcgaacgaa agcaagcagg gcctcaatgc gtcgattctg cccagcggac
     1141 caggccggcc ggaaccggcg tgggtgcatc agcgcgtgaa ccggcctggg gacgaagcca
     1201 tagctgacga agacgtcttc ttcgacctcc aggctcgggt acagtcgttc gaggtccccg
     1261 gcccggtact cccgaacccg gtggcgaagc gtcaagtcct gggcccgcgc cggcgcccgg
     1321 atcggatccg cctggacaaa cccaagccgg ttgagggcgc cctgcagggt ggtgggagga
     1381 aagaggctcc gcgcgaccgc gaaccggcgc agatccccga gcgtgacagc catctgaacc
     1441 gacctgacca ggaaagagac accgaagctt aagccgtcga cgcagtggca gctaaggccg
     1501 gggtcttcgc caaggcgtct gccgccgttc tactccgccc gcatcgcgat cagcgggtcc
     1561 acccgtaccg cgcgccaggc cggcaccaga ctggccagga gcgcggcgac gcccagcgca
     1621 cccaccgcca gcgccagcgt cggcgggtcg aatggcgaca cgccgtagag cagagcgccc
     1681 agtgcgcgcg agctcacgag cgtgagcacc gcacccaccg cgagccccgg caccacggcc
     1741 gcgagcgtcg tgccgagcac cagggtgcgc actcgtcccg gtgtcgcccc gagtgcgcgt
     1801 cgcacgccga tctccctggt gcgttgcgct accgcatagg acaccacgcc gtaaatcccc
     1861 accacggcca ggagcagcgc cagcgcgccg aacgtcccca gcaccagcat cgtgaagcgc
     1921 ttatccgcca cggtgcccag caccagctca tccatcgtcc gaagcaccgc gggaacctcc
     1981 ggatccaccg cgcggatggc ttgccgcagc gcggcaaagg ttcccgccgg cgccacgccg
     2041 gtgcgggcca catacgtcac cgacgcagtg cgatacggcg gtcgttgccg gtggtcgaag
     2101 taataggtgg gccgaaatgc agcggtgatc gagctcgagc gcacgctcgg cactaccccg
     2161 atcacggtga accacggctc ggcgtcgtcc tcgctgttgc tgtccatccc cgccggcttg
     2221 acccgcttcc ccagcgggtt ctcccccggc cactcctgtt tcgcgaaggc ctcgtccacg
     2281 atgaccacct tcggcgcccg ttcgtcatcg cccaggccga aagctctgcc cttgagcagc
     2341 ggcattccca tcgcccggaa gtagtcgccg ccgatcaccc gatagatgga gtacccggaa
     2401 tagcggccgc cgggttcgaa cggcttgcct tccaccacca tcgagccgct gggaccgttg
     2461 ccgaacagcg gcggcacgtt gacgaagccg gcggcggtga ggcccggcac cgcggtgatc
     2521 cgctccagcg cagcgaggtg aaacgcgctg atcctggccg accggccggg gtagttcacc
     2581 gaaggcaggt ctaccgcgag tgccaccgcg ccctgggggt cgaagccgag ctccgtctgc
     2641 atcacccggt caaacgactt gatcaagagc accgatcccg acagcagcgc caccgcgagt
     2701 gccacctccg ccgcgaccag cacgttccag gcgcgcatcc ttcgggcgct cgccatgccc
     2761 accgcggctt cgcgcagcgt cgtgaccgtg gaggtggcgg agagccggaa cgccgggaag
     2821 agcccgaaga gcagcgtcgt ggccacggcg acggcgagcg cgaagaccgc gacccagcca
     2881 tcgatcccca cccggtccat ccgcaggcct gcgggcgcga gcggggtcag ggtacgaagc
     2941 aggaacagcg ccagtccgag accggttgcg gcacctaacc cggcaagcag cgcgctctcg
     3001 gtcaggagct gccgggccag cctgacccgg gtcgcgccga gggcggagcg cacagtcagc
     3061 tcgccgagcc gcgccgtgcc gcgcgccagg atcccgctcg ccaggttgct gcacgccgcg
     3121 agcaggaaca gccccgcggc ggcgagcagc agccagagcg gccgcgcgag cccgccggtc
     3181 tcggcctgct ggagtccggt caccagcgag ccggtcgcgt cgaagtcccc cgagtacacg
     3241 ggccggagcg cggcaaggat gttgtccagc tcccgcgccg ctgcctccgg cgccacaccg
     3301 ggccgcagcc ggcccactac gtcccagttg tgcgaggtgc gcgacaggct ctgctccatc
     3361 agctcgagcg gcgcccagat ttctgcgcgt tcgggaaaat cgaagcccgg agggagcacc
     3421 ccgatcacct ggaggtccca gcccagcttg agccggattc cctcgagcga ccggggcgat
     3481 cccagtgcgt cgcgccagaa cgcgtggctc acgaccgcta cggggctcgc gcccagccga
     3541 tgctcgtcgg ccacgggcag gtggcccagc tccggacgca gtgggaacac cttgaagaag
     3601 ccggccgaca cggcgccgat ccgtacccgg aggggctggc cggtgccgac caccgtcgcc
     3661 gtccaggcgc cgtacgatgc catcgcggtg aacgaacctg cgtgggtttc gaggtcgagg
     3721 aaattggccc agggcaggct gccactgccc ctttcgtggc gctcctcgat ggtcaccagc
     3781 cggtcgggct cggcataggg caacggccga agcagcaccc ggttcacgat gctgaacatg
     3841 gcggccacgg cgccggtgcc caggcccagt gtgagcaccg cagtcagggt gaagccggga
     3901 ctcttccgga gagtgcgaaa gcccactacc aggtcttgcc agaaggcgcc cagccact
//
LOCUS       DASWKS010000218         4044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_473829, whole genome shotgun sequence.
ACCESSION   DASWKS010000218 DASWKS010000000
VERSION     DASWKS010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473829"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VGA78_06575"
     CDS             <1..347
                     /locus_tag="VGA78_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9893569.1"
                     /translation="AYKLCGNAYIIGIVAIIADCFAIGRGAGIAPAATLKLFDFFDPA
                     AIIGGRGKKMAAGDFTPSFLLTMARKDLRLMIETATGSTLAALPGIAARMDQLIAQGH
                     GAKDLGVIGRDG"
     gene            717..1397
                     /locus_tag="VGA78_06580"
     CDS             717..1397
                     /locus_tag="VGA78_06580"
                     /inference="COORDINATES: protein motif:HMM:NF028235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9893570.1"
                     /translation="MPARPPKRRVRAPDATRGKILAAAFEEMYQRGFQAASLDTIVEQ
                     AGVTKGALYHHFADKAALGYAVVDEVITRPVLDVYLGPLQESTVDPLTALQQLLRRRA
                     DDFRSGGIELGCPLNNLAQEMSPLDERFRRHVEAALDAWTDGFARALRRGQTAGTVRK
                     DVNARAVAAFMVATVEGSFGMAKNAKSQPLLRANLELLASFLETLRPPRRRRRNGVTR
                     RSTTRRAA"
     gene            1469..3913
                     /locus_tag="VGA78_06585"
     CDS             1469..3913
                     /locus_tag="VGA78_06585"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893571.1"
                     /translation="MLLNDFRYAIRSLSRARGFTLAVVLTLGLGIGANTAIFSVVRGV
                     LLKPLPHRDGDRLVYLRHSINGPGGESINFSVPEILDFRTASKTLGGIAEYSNMTYTL
                     QGNDDAARITVGLVTGNYFEIMGLSPVLGRALDSRDDGTTVPPVMVLTHEFWQRRFNG
                     DSAIIGKSVRLDNRAVEVVGVLQPAPSFPSRIDALLNMVISEHHTSAMMVHGRTHRMT
                     EMIARLAPGATVEQARAEVTAIRARVQADHVDAYDPGSGYRVSVIPFQEVLGERARLT
                     LYLLMGAAAFVMIISCANVANLTLMRGVGREQELVVRAALGAGAGRLRRLLLAENLVL
                     ASIGAVLGLLLAKGGVRLLIALAERYSPRANEIRLDGMVLGFTLLLTLVVALILSFAP
                     KLAKEGTLGTWVAAGLNRASGGLRRQRLQRGLVVAQIAVSVMLLTGAGLLTRTMVQLA
                     DVDDGLTADEVLTVEVPLGFSRPDADAKALYDRMRFELAALPGVSEVGFGSTIPLRAS
                     EFQLEVKAEGRPLAAGEAMPRAEYRTASPEYFRAAGIPLLSGREFASTDQKTTQRVVI
                     LNKTLADLLFADKDPIGQRVAWTGDVLRFIGVSGDWRTVVGVVGNTKDGGLDAEPRGV
                     VFQPFAQENHFGFGGLVVRAASDPSALAGAASRVLRGIVPNDPVENVLTVSQIRDQSV
                     APRRLNATLISSFGILAVIIAAVGIAGVLAFSVSARTNEIGIRMSLGADSAKVQKMVL
                     KEGGVLLALGLVLGVAGSLFASRLIQGLLFGVAPHDPVTLAGVALVMAAVGIGACWLP
                     ALRAARIDPAVAIRGL"
BASE COUNT          632 a         1335 c         1385 g          692 t
ORIGIN      
        1 ccgcttacaa gctctgcggc aacgcctaca tcatcggaat cgtcgccatc atcgccgact
       61 gctttgcgat cgggcgcggc gccggcatcg cccccgcggc aaccctcaag ctgttcgact
      121 tcttcgaccc cgccgcaatc atcggggggc gggggaagaa gatggcggcc ggcgatttca
      181 cccccagctt cctgctcacg atggcgcgca aggacctgcg cctgatgatc gagaccgcaa
      241 ccggctccac gctcgcggcc ctgcccggga ttgcggctcg aatggatcag ctgatcgccc
      301 agggccacgg cgccaaggac ctgggagtca tcggccggga cggctgaagg attcgaggtc
      361 cgaaagcggc gtagatcagc cgattccagg tccgaattcg gcgggcacgc caccaatgca
      421 cgccctatgg tgtggaagta cgggtggtaa agcagctccg actcgagcta ggtgtcgtcc
      481 ctgatcctcg gagtcaccat tgcgacggtc ggacggcccg ccgtcgaagg cgcccgtcgc
      541 ctgacccgtc accgggaccg gctctggtcc tgccacgggc gaaccccgct cccgatttcg
      601 actgcgtccc gatgctaaat accgattggt atgtaaccgg atcgtaccgg cttgcggtcc
      661 gggccggaag tcattacata ctgatcggtt tgtagctggt ccatcgagga gcatgcatgc
      721 cggcccgccc ccccaaacgc cgagttcggg cccccgatgc cacccgggga aagatcctgg
      781 ccgccgcgtt cgaggagatg taccagcggg ggtttcaagc ggccagcctg gataccattg
      841 tggagcaggc gggggtgacc aagggagcct tgtaccacca cttcgccgac aaggcggcgc
      901 tgggatatgc ggtggtcgac gaggtgatca cccggccggt gctggatgtc tatctcggtc
      961 cgcttcagga aagcaccgtc gatcctctga ccgccctcca gcagctgctg cggcgccggg
     1021 ccgatgattt ccgctccggc ggtatcgagc tgggctgccc cctcaacaac ctggcccagg
     1081 aaatgtcccc gctggacgag cgcttccggc gccacgtcga ggccgccctg gatgcctgga
     1141 ccgatgggtt cgcccgggcc ttgaggcggg gacagaccgc cggcacggtg cggaaggatg
     1201 tgaacgcccg cgcggtggcg gccttcatgg tcgcgacagt ggaaggctcg ttcgggatgg
     1261 ccaagaatgc caagagccaa cccctgctgc gggcgaacct ggagctgctg gcgtcgtttc
     1321 tggagaccct gcgtccgcct cgccggaggc gccggaacgg cgtgacccgg cggtccacga
     1381 cccggcgcgc cgcctgacgc cggaatccag ctcaaacaat ccgggcaata acccgtaata
     1441 gattagacca ccctacgccg aggacccgat gttgctcaac gactttcgct acgccattcg
     1501 cagcctgtcc cgggcccgcg gcttcaccct ggccgtggtc ttgaccctgg gactcggcat
     1561 tggcgccaat acggcgatct tcagcgtggt ccggggcgtc ctgctcaagc ccctgcccca
     1621 ccgggacggc gaccggctgg tctatctccg tcactcgatc aatggtcctg gcggcgagag
     1681 catcaacttc tcggttcccg agatcctcga tttccgcacc gcctccaaga ccctgggcgg
     1741 catcgcggaa tactccaaca tgacctacac cctccagggg aacgatgacg cggcgcggat
     1801 caccgtcggc ctggtgaccg gcaactactt cgagatcatg ggtctctcac cggtgctggg
     1861 acgggcgctg gacagccgcg acgacgggac caccgtccca cccgtcatgg tgctgaccca
     1921 tgagttctgg cagcggcggt tcaacggcga cagcgccatc atcggcaagt cagtccggct
     1981 cgacaaccgg gcggtcgagg tcgtgggggt actccagcct gctccctctt tcccgagccg
     2041 gatcgacgcg ctgctcaaca tggtgatcag cgagcatcac accagcgcca tgatggtgca
     2101 tgggcggacc caccggatga ccgagatgat cgcccgcctg gcccccggcg ccacggtgga
     2161 acaggcccgg gcggaggtga ccgccattcg ggcccgggtc caggccgacc atgtcgacgc
     2221 gtacgacccc ggttccgggt accgggtctc cgtgattccg tttcaggaag tcctggggga
     2281 gcgggcccgc ctcaccttgt acctcctgat gggcgcggcg gctttcgtga tgatcatctc
     2341 ctgcgccaac gtggccaacc tgactctcat gcgtggcgtg ggccgggagc aggagctggt
     2401 ggtgcgggcg gccttgggtg caggcgcggg tcgtctgcgg cggctgctgc tggccgagaa
     2461 cctggtgctc gcgtcgatcg gagcggtgtt ggggttgctc ctggcgaagg gcggggtccg
     2521 gctcctgatc gccctggcgg agcgctactc gcctcgggcc aatgaaatcc ggctcgacgg
     2581 gatggtgctc ggcttcactc tcctgctgac cctggtcgtg gccctcattc tgtccttcgc
     2641 gcccaagctg gccaaggaag gtaccctcgg cacctgggtg gctgccggcc tgaatcgggc
     2701 cagcggcggc ctccggcggc agcggctcca gcgcgggctg gtggtggccc agatcgcggt
     2761 gtcggtgatg ctcctgaccg gtgccggact gctcacccgg accatggtgc agctggccga
     2821 tgtggacgac ggcctcaccg ccgacgaagt gcttaccgtg gaggtgccgc tggggttctc
     2881 gcgaccggat gccgacgcca aggcgctcta cgaccggatg cgcttcgagc tcgccgcgct
     2941 cccgggagtc agcgaggtgg ggttcggctc gaccataccg ctccgcgcct cggaattcca
     3001 gctggaggtg aaggcggaag ggaggccgct cgccgcgggc gaagcgatgc cccgggccga
     3061 gtatcgcacc gccagcccgg aatacttccg ggccgcgggc attccgctgc tgtccgggag
     3121 agagttcgcc agcaccgacc agaagaccac ccagcgggtg gtgattctga acaagacgct
     3181 ggccgacctg ctctttgccg acaaggatcc gatcggccag cgggtggcct ggaccggcga
     3241 cgtgctgcgt ttcatcgggg tgagcggcga ctggcgcact gtggtcggcg tcgtgggcaa
     3301 caccaaggac ggcgggctcg atgccgaacc gcgcggcgtg gtgtttcagc cgttcgcgca
     3361 ggagaaccat ttcgggttcg gcgggctggt ggtccgggcc gccagcgacc cctcggcctt
     3421 ggccggcgcc gcgagcaggg tgctccgcgg gatcgtgccg aatgatccgg tcgagaatgt
     3481 gctgacggtt tcacagatcc gggatcagag cgtggccccc cgccggctca acgcgaccct
     3541 gatctcgtcg ttcggcatcc tggcggtgat catcgcggcg gtggggatcg ccggggtgct
     3601 ggcgttctcg gtgagcgccc gtaccaacga gatcgggatc cggatgagcc tgggcgcgga
     3661 cagtgccaag gtgcagaaga tggtactgaa ggaaggcggg gtgctcctgg cgctgggcct
     3721 ggtgctgggt gtcgccgggt cactcttcgc ctcccgcctg atccagggac tgctgttcgg
     3781 ggtggcgccg cacgatcccg tgaccctggc cggcgtggcg ctggtcatgg cggcggtcgg
     3841 aatcggggcc tgctggctgc cggccctgcg ggcggcccgc atcgatcccg cggttgcgat
     3901 ccggggactg tgaactcaaa ctgctgagta ctgaggactg agtattgagt actgagccta
     3961 acacaatggc cgacagcaac aatgcgctgt cgggtcatcg gcggcatctg cggatccaaa
     4021 tgccgatcgc cttcgatcgc cttc
//
LOCUS       DASWKS010000219         1920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3071303, whole genome shotgun sequence.
ACCESSION   DASWKS010000219 DASWKS010000000
VERSION     DASWKS010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3071303"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VGA78_06590"
     CDS             <1..389
                     /locus_tag="VGA78_06590"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9893572.1"
                     /translation="TNYFEAFPSVFGTRRSYNGSEFIYYHTGLDLYGSSTTPVLAPAA
                     GRVAFASLLTVRGNTTYIDHGWGVFSGFLHQSEILVQPGELVEPGQIVGYVGGTGRVT
                     GPHLHWEVWVGGVPVDPLTWTRSAFP"
     gene            622..>1920
                     /locus_tag="VGA78_06595"
     CDS             622..>1920
                     /locus_tag="VGA78_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893573.1"
                     /translation="MAEALIGSRIDREREAVEQSKVSAAQPYLPGQRYLLGQQLQFHN
                     LANRVGTVTRVRASSNPDLPAFEVIQVELDGELREFAAGLEDHPLNSIQHPTAESDGE
                     LSPDLIVQRNGGRITQAVDAGLGKRPEVVRIAGKWFHRGLLAEINEGHLNLAEAVLDV
                     AAGGPLPTKDLVEHMETPPGLDPLLTEFSVDYALQEDERFDEVGPAGKVLWFLKRLEP
                     PEVLQTPPRLVDQAESYDRALLGPDLLGLERELDDELSPDAAPGDSGAQEVNLVLPFP
                     HWSVGSLPLSARLRPMFPTAYEAPRIRFILVDGHSGAKFPGWVVRAQRYVFGLAEWFR
                     QYDVPAGGLINVRPGREDGEVLVEAVDPRRRNDWIRIASVGEDGRIGLRMLKHPVGTA
                     YDDRRIIGVLDRRALDAAWQSSSQRLLSLDRLVPQMFRELS"
BASE COUNT          344 a          591 c          620 g          365 t
ORIGIN      
        1 cgaccaacta ttttgaggcc ttcccttcgg tattcgggac ccgccgaagc tataacggga
       61 gcgagttcat ttactaccac acgggattgg acttgtacgg gagcagcacc acaccggtcc
      121 tggcccctgc ggccggacgg gtcgcgtttg cgagtttgct cacggttcgc ggcaatacaa
      181 cgtatatcga ccacggttgg ggagtcttca gcgggttcct gcaccagtcg gagattctgg
      241 tccagcctgg ggaactggtc gagccgggcc agatcgtggg gtacgtcggt gggacaggcc
      301 gagtgaccgg gccgcacctg cactgggaag tctgggttgg gggagtaccg gtcgatcccc
      361 tgacctggac ccgctccgcc tttccttagg atgaacctcc acttgcctgg gtcggcgaac
      421 gaaccggtcg gccgttaagt ctgtgcgatc tggtggcgta gtataatttc ctagcggtcc
      481 cctgcgcccg atcaccgaat gcgatccatc cccccgcccg gaagtgaaag ctactgggcc
      541 aagttcgaac tcaacgagac cgacctcaac ttcatcgaca atctcctgct cgagcgaggg
      601 gtcccgctca cgcccagaga gatggcggag gccctgatcg ggagtcgcat cgatcgcgag
      661 cgggaggccg tcgagcaatc caaggtgtcc gccgcccagc cctacctccc tggccagcgc
      721 tacctgctcg gccagcagct acagtttcac aacctggcca atcgggtggg cacggttacc
      781 cgagtgcggg caagctcgaa ccccgacctg ccggcctttg aggtaatcca ggtcgagctg
      841 gacggagagt tgagggaatt cgcggccgga ctcgaagacc acccattgaa ctcgatccaa
      901 catccgacag ccgaatcaga cggagaactc agcccggatc tcatcgtcca acggaacggc
      961 ggtcggatca cccaggcagt tgacgccggc ttagggaagc ggcccgaggt cgtccggatc
     1021 gccggcaagt ggtttcaccg gggcctgctg gctgaaatca acgagggcca cctcaacttg
     1081 gcagaagccg tgctcgacgt ggcggcgggc ggcccgctgc cgaccaagga tctggtagag
     1141 catatggaaa cccctccggg tctcgaccca ctgctgaccg agttttcggt cgactatgcc
     1201 ctccaggagg acgagcgatt cgacgaggtc ggtccagcgg ggaaggtctt atggttcctg
     1261 aagcggttgg agcctccgga ggttttgcag accccgccgc ggcttgttga tcaggccgaa
     1321 tcctacgacc gggccctgct gggcccggac ctgctcgggc tggagcggga actcgatgat
     1381 gaactcagcc cggacgctgc gccaggggat tctggcgccc aagaagtcaa cctggtgctt
     1441 cctttcccgc actggtcggt cggctcgctg cccttgtccg cccggctccg gcccatgttt
     1501 cccacggctt acgaggctcc cagaatccgt ttcattttgg tcgatggtca cagcggagcg
     1561 aagtttccgg gttgggtcgt ccgtgctcag cgctatgtgt tcggcctggc ggaatggttc
     1621 cggcaatacg atgtcccggc gggagggctg atcaatgtgc ggccaggccg ggaggatggt
     1681 gaggtgctgg tcgaggcggt cgatccgcga cgccgcaacg actggattcg gatcgcctcg
     1741 gtaggagaag acgggcggat cggcctgaga atgctgaaac atccggttgg cactgcctac
     1801 gacgaccgcc ggatcatagg ggtacttgac cgacgggcgc tcgacgctgc ctggcaaagc
     1861 tcctcgcagc gcttgctctc gcttgatcgg cttgtccctc aaatgtttcg ggagctctcg
//
LOCUS       DASWKS010000220         4913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1588688, whole genome shotgun sequence.
ACCESSION   DASWKS010000220 DASWKS010000000
VERSION     DASWKS010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1588688"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VGA78_06600"
     CDS             <1..348
                     /locus_tag="VGA78_06600"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX9893574.1"
                     /translation="VDDLLDFTEAESVTGKPSGSDLREHKVTLPLIYALPRMTPVQRS
                     RVQRLMDTPEPGDELIAEVVADVAATGGLVYARERAQRFAALAEAELEALAESPARET
                     LRASLSYVLDRRR"
     gene            348..620
                     /locus_tag="VGA78_06605"
     CDS             348..620
                     /locus_tag="VGA78_06605"
                     /inference="COORDINATES: protein motif:HMM:NF025572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4321 domain-containing protein"
                     /protein_id="HEX9893575.1"
                     /translation="MASSPRRPFFYAVVLSIGFIIGGFLNALLRRFLPDSPTKDFFTY
                     AVTPELGPVPVNLLVIHFTIGPIGLDVSLLSILGVVLAYLVARSLF"
     gene            645..896
                     /locus_tag="VGA78_06610"
     CDS             645..896
                     /locus_tag="VGA78_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEX9893576.1"
                     /translation="MPNLGFPEILLILVVVLLLFGAKRIPEIAGSFGKGIREFKRSLS
                     DAKDAIDAPVSTNEPPGSRQIDSATQPAPTSGEPKRLSQ"
     gene            complement(1029..2864)
                     /locus_tag="VGA78_06615"
     CDS             complement(1029..2864)
                     /locus_tag="VGA78_06615"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEX9893577.1"
                     /translation="MMQAFRNSAKPLIFIVAISFFAWLVLDLSGLTGGGGLLTQTSVG
                     EINGKSVDTRVFQQAVSQATEDRQRQSPEPLGIAAAAQIRDQVWEQFVQETILEDEYR
                     KWGISVSSEEIAAVIRSQPLPQLMGEAQFQTDGQFDQTKYERWLASASGQQFVPLLES
                     QYRSSLLQAKLARHVVAPLYLSDTELWERFKDQRETARIGLVTIDPNAAIADASVPVT
                     PTEIEEYYRTHRKELEREATAWLSYVSVDRRPIASDSTAALERARQLRAEIAGGTSFA
                     EVARRESSDTVSGRQGGDLGTWRKGAFDPEFEKAAWSLSLNTVSQPVLTQFGYHLLEV
                     TKRWADSATGRHILVPIEVTGAHRDQLDARADSLEQLGAERLDPAALDTTARALGLTI
                     QRSGTVVKNRLSALPPDAQVWAFQARPGEHSPVVETPTQYLVARLDSARESGVPRLEL
                     IRGEVETLVRLQRKEAEARKLAEQVRQHASQAGATLESVAKTLNLPFSIIGPVARVGA
                     PLNGGQAIGRAFALQPAEISGPVEGRGLVYVMQGIERIPADSAAFTKELPELRQRALD
                     NMRQLHLRQYLSALRSKAKVVDQRDRIYKTAAQVEAEAPVAPGTR"
     gene            3025..4683
                     /locus_tag="VGA78_06620"
     CDS             3025..4683
                     /locus_tag="VGA78_06620"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893578.1"
                     /translation="MAISNEIEKLERRWQQTSGLVFAPLAEAYRKAGLHQRALEVLEQ
                     GLSLHPEYGPALIVRGRCHLDTGNLNLAEAAFEQALLRDPMDPIALRGMADVFARTDR
                     VQEAIDRLQILVEIDPQNTEARAVLQRLRHQPPVTEPAESEPAPVDPAPIEPEPPPPA
                     FPLWRAPEVPEASAPPPPQSSEAPVPETNEPVGFEPTALTAPDAEEIPIEVIDLSASE
                     ATPVTPVNPGPVVEIDDFRVESFAVEPLEVPAEPSDRTPESLGPVSWTPAPVAEPMEE
                     TETASVPESPPEPMVEMPEEPLVASFQPVLEPEIEAGVEPEPAVAEPPVGEYASAMAQ
                     PIESAAAEISPEPEAEETEKLSQPPPAEVVVGDVPVEEPPALIVTESMAELFLKQGHR
                     ELALAVYRQLVDRSPESDRLRSEIERIESELAPRATPSAASQRSYAATATGGQSVERM
                     LQGILRAQPTAPASSVLPPAIEPTPGEPTRAASETLPLSAVFGDEPAVAPKPEPTPAD
                     TEPSFDEFFGAVPSAEPAPTGGGERSPEAEDLRQFNEWLKGLKR"
     gene            4692..>4913
                     /locus_tag="VGA78_06625"
     CDS             4692..>4913
                     /locus_tag="VGA78_06625"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX9893579.1"
                     /translation="MAVLNGPNLNLLGQREPAVYGHSTLADIERMVRDEAGRLGCTLS
                     WSQSNHEGALIDAIQQLPGRADGLVLNAGA"
BASE COUNT          800 a         1636 c         1615 g          862 t
ORIGIN      
        1 gtggacgacc tgctcgactt caccgaggcg gaaagcgtca ccggcaaacc ctccggcagc
       61 gatttgcggg agcacaaggt caccctgccg ctgatctatg cgttgccccg catgaccccg
      121 gtccagcgga gccgggtcca gcggctcatg gatacgccgg aaccgggaga cgaactgatc
      181 gccgaggtcg tcgctgatgt cgccgcgacc ggaggcctgg tctacgcccg ggaacgggcc
      241 cagcggttcg cggcgctggc ggaggccgag ctcgaggcgt tggctgaatc cccggcccgg
      301 gagaccctgc gggccagtct ctcctatgtg ctcgatcgga ggcgttgatg gccagtagcc
      361 cgaggcgccc ttttttctac gcggtcgtcc tcagcatcgg cttcatcatt ggcggattcc
      421 tgaacgcctt actacgccgc ttcttacccg acagcccgac caaggacttc ttcacgtacg
      481 cggtgacccc cgagctcggg cctgtcccgg ttaacctgct ggtgatacac ttcactattg
      541 gcccgatcgg gctggatgtg tccctgctga gcatcctggg tgtcgtcttg gcgtatctgg
      601 tggcccggtc gctcttctga gcgggggcgc caatggaggt gtaaatgccc aatctgggtt
      661 tccccgagat cctgctgatc ctggtcgtgg tgctgctgct ctttggagcc aagcggatac
      721 cggagatcgc gggctcgttc ggcaagggga ttcgcgagtt caaacgcagt ctgagcgatg
      781 ccaaggacgc gatcgacgcg ccggtctcca ccaacgaacc cccggggtca cgccagatcg
      841 attctgcgac ccagccggct ccgacctcgg gggagccgaa gcggctctct cagtagaggc
      901 acggacgggc ggacggactg acggacagtc ctaacaacac ccttaccaca aaaacagggc
      961 ggccgcggcg ggccgccctg tggttttttt gaccgtccgt ccgtccgtcc gttcgtccgc
     1021 ccgtccgtct atcgcgttcc tggcgctacc ggagcttccg cctccacctg ggccgcggtc
     1081 ttgtaaatgc ggtcgcgttg atcgacgacc ttggccttgg aacgcagcgc gctcaggtat
     1141 tgccgcaggt gtaattgcct catgttgtct agcgcccgtt ggcgcagctc cggcagttcc
     1201 ttggtgaacg cggccgagtc ggccgggatt cgctcgatcc cctgcatcac atagacgaga
     1261 ccccggccct ccaccgggcc gctgatctcc gccggttgca gggcgaaggc ccggccgatg
     1321 gcttggcccc cattgagcgg agcgccgacc cgggccaccg gcccgatgat gctgaatggc
     1381 aggttcagcg ttttcgcaac gctctccagg gtggcgccgg cctggctggc gtgttggcgc
     1441 acctgttcgg ccagcttccg cgcctcggcc tccttgcgtt gcagtcggac cagggtctcg
     1501 acttcgcccc ggatcagctc cagtcggggc acaccggact cgcgagcgct gtccagccgg
     1561 gcaaccaggt actgggtcgg agtttcgacg accgggctgt gttcgcccgg acgagcctga
     1621 aaggcccaca cctgcgcgtc gggaggaagc gcggagaggc ggttcttgac cacggtcccg
     1681 cttcgctgaa tcgtcaagcc cagcgcccgc gccgtggtat cgagcgcggc agggtcgagc
     1741 cgctcggcgc ccagctgctc cagcgaatcc gcccgagcgt ccagctggtc gcggtgcgct
     1801 ccggttactt cgatcggcac caggatgtgt cggcccgtgg ccgagtcggc ccaccgcttg
     1861 gtgacttcca acaggtggta gccgaactgg gtgagcaccg gctgcgacac cgtgttcaga
     1921 gacagcgacc aggccgcctt ctcgaattcg gggtcgaaag cacccttacg ccaggtaccc
     1981 agatcgccgc cctgtcgccc cgaaacggta tcagaggatt cgcgccgggc cacttcggca
     2041 aaggaagtcc cgccggcgat ctcggctcga agctgccggg cccgctccag ggccgcggtg
     2101 ctgtcgctgg cgatgggacg acggtcgacg ctgacgtaac tgagccatgc agtcgcctct
     2161 cgctctagtt ccttgcgatg ggtacggtag tactcctcga tctcggtcgg cgtcaccgga
     2221 acggaagcgt ccgcgatggc ggcgttcgga tcgatggtta ccagcccgat tcgcgcggtt
     2281 tcgcgctgat ctttgaatcg ttcccacaac tcggtatcgg agaggtacag cggcgctacc
     2341 acgtggcggg ctagcttggc ctgcaacaag gaggagcggt actggctctc cagcagcggc
     2401 acgaattgct gaccgctggc ggaagccagc caccgctcat acttggtctg atcgaactgg
     2461 ccatctgtct gaaattgagc ctcccccatg agctggggca gcggctgtga ccggatgacg
     2521 gcggcgatct cctctgagga cacggagata ccccacttgc ggtattcgtc ctcgaggata
     2581 gtctcctgta caaattgctc ccatacctgg tcccgaattt gcgccgctgc agctattccc
     2641 aggggctctg gggactgccg ctggcggtct tcggtcgctt gggatacggc ctgttggaag
     2701 acccgggtgt cgaccgattt gccgtttatc tcgccgacag acgtctgggt gagcagcccg
     2761 ccgccgccgg tgaggccact caagtcgagt acaagccatg caaaaaacga gatggcaacg
     2821 ataaagatca gcggcttggc gctgtttcgg aaagcttgca tcattgcggt aacagccccc
     2881 gcccggaagg ggttaaaggg ccctaagtct acgcaggaca cggggctttc tcaagcggat
     2941 gggtcgagtt ttgagccgcc cggtctcctc cggcagggaa ttcgctagct gatcttacca
     3001 caacggttta cggagcaggg tgggatggcg atctccaacg aaatcgaaaa actcgagcgc
     3061 cgctggcagc agacctccgg gctggtcttc gcccccttgg ccgaagccta tcgcaaggcc
     3121 gggctgcacc aacgcgccct cgaggtcctc gagcagggct tgtccctcca cccggagtat
     3181 ggtcccgcgc tcattgtgcg gggccgttgt catctcgata ccggcaacct gaacctcgcg
     3241 gaggccgcgt tcgaacaggc cctcttgcgc gaccccatgg acccgattgc cctgcgtggg
     3301 atggccgatg tgtttgcccg cactgaccgg gtccaggagg ccatcgatcg gctgcagatt
     3361 ctggtggaaa tcgatcccca gaacaccgag gccagagccg tgctccagcg gctccgccat
     3421 cagccgccgg tgacggagcc ggccgagtcg gaaccggctc cggtcgaccc agcgccgatc
     3481 gagcccgagc cgcccccgcc cgcgttcccg ctgtggagag cgccggaggt tcccgaggcc
     3541 agcgcgcctc ccccgcctca gtcgagcgaa gctcccgtcc ccgaaaccaa cgagccggtg
     3601 ggtttcgagc cgaccgctct gaccgctccc gacgccgaag agattccgat cgaagtcatc
     3661 gacctgtccg cgtctgaggc cacaccggtc acaccggtga atccgggtcc cgtggtcgag
     3721 atcgatgatt tccgagtgga gagctttgcg gtcgagccgc tcgaggtgcc ggctgagccg
     3781 agcgaccgca cgccggaatc gctgggacct gtttcctgga ccccagctcc cgtcgccgag
     3841 ccgatggaag aaaccgagac tgcttcggta cccgagagtc cgcccgagcc gatggtcgag
     3901 atgccggaag aaccgctcgt ggcctcgttt cagccggtgc tggaacccga gatcgaggcc
     3961 ggcgttgagc ccgagccggc ggtcgcggag cctccggttg gcgagtatgc ttctgccatg
     4021 gcgcagccaa ttgagtcggc ggcggcggaa atctcgcccg agcctgaggc ggaggagacc
     4081 gagaagctct cgcagccgcc gccggccgag gtcgtcgtgg gggacgttcc ggtcgaggag
     4141 cctcccgcgc tgatcgtgac cgagtccatg gccgagttgt tcctcaagca aggtcatcgg
     4201 gaactcgcgc tcgcggtgta tcgccagctg gtcgaccgca gccccgagtc ggatcggctt
     4261 cgcagcgaga tcgagcggat cgaatcggag ctggcgccgc gtgcgacgcc ctcggccgcg
     4321 agtcagcgct cctatgccgc caccgcgacc ggcggccagt cggtcgaacg gatgctgcag
     4381 gggattctca gagcccagcc cacggccccg gcctcgtcgg tgctgccgcc cgccatcgag
     4441 cccacgccgg gcgaacccac ccgagccgct tccgagacgt tgccgctctc ggctgtcttc
     4501 ggcgatgaac cggcggtggc acccaaaccg gaaccgacgc cggccgacac cgagcccagc
     4561 ttcgatgagt tcttcggcgc ggtgccctcg gccgagccgg cccccacggg tggcggagag
     4621 cggagccccg aggcggaaga ccttcgccag ttcaacgagt ggctcaaggg cctcaagcgc
     4681 tgaccgttcg ggtggccgtg ctgaacggcc ccaacctgaa cttgctgggc cagcgcgagc
     4741 cggccgtgta cggtcacagc accctggcgg acatcgagcg gatggtccgg gatgaggccg
     4801 gcaggctggg atgcacgctg tcctggtcgc agagcaatca tgaaggcgcg ctgatcgacg
     4861 cgatccagca gttgccggga cgggccgacg gtctggtcct gaatgcgggt gcg
//
LOCUS       DASWKS010000221         4281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_840998, whole genome shotgun sequence.
ACCESSION   DASWKS010000221 DASWKS010000000
VERSION     DASWKS010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4281
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840998"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VGA78_06630"
     CDS             <1..185
                     /locus_tag="VGA78_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893580.1"
                     /translation="EQRLLRGELSILERAWRREERLAAIADRLTVPENVARQLADLRL
                     AARRDPSRPSCPSHSQ"
     gene            complement(113..919)
                     /gene="meaB"
                     /locus_tag="VGA78_06635"
     CDS             complement(113..919)
                     /gene="meaB"
                     /locus_tag="VGA78_06635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEX9893581.1"
                     /translation="MKPDRSDPAGLARALSVVENGGMAADQLLASLHDRLGGAHRVGI
                     TGPPGAGKSTLAHALVRHWREAGRTVAVVAVDPSSPLSGGALLGDRIRMEGVALDQGV
                     FIRSMATRGALGGLAFTTQEVCDVLDAAGFDLILVETVGVGQAELAVVAATDTTVLVL
                     VPESGDGIQTLKSGLMEVADIFAVNKADRPGAELLLREIRLALDLRTVRPGDGAGGES
                     TAWRPPAVLTTASSGAGAPELAQAIAAHWEWLGQEGRLGSRRAARRRSAS"
     gene            complement(916..2226)
                     /gene="mgtE"
                     /locus_tag="VGA78_06640"
     CDS             complement(916..2226)
                     /gene="mgtE"
                     /locus_tag="VGA78_06640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX9893582.1"
                     /translation="MLALLRSGRLDVFLDRAPELEPADLADVLAQLDDETRLEVVRRL
                     PAEVSAGALVEMPAEAHAEETLAELDPAQAAEIVDELADDDAADILQTMERETQERIL
                     AQVEDREDVDRLLRYDEETAGGRMTAQVVTALLHDTVSKTVESVRRQAEVTDDFSQIF
                     VVDQARQLQGVLSFKSLVLNPGDRLVSEVMEPADLTVAPETDQEEVARLMARYNVPAI
                     AVVDHNGKLLGRVTFDDVIDVVEAETTEDLLRFGGVSADEDLAAPWNTTLQTRLPWLF
                     VNLVTAFLAASVVVLFQDTLARTLALTAWMPIVAGLGGNAGTQALAVTVRRLALGQIQ
                     TNRAMGVIGKELAVGIFNGLALGLAVGTVAVVTGQGPRLGLVVFLAMACNQCVAGFAG
                     AFIPLMLQRLGIDPAVASSVFVTAFTDMCGFALLLGLAGSLLLR"
     gene            complement(2253..3437)
                     /locus_tag="VGA78_06645"
     CDS             complement(2253..3437)
                     /locus_tag="VGA78_06645"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX9893583.1"
                     /translation="MTLLLLGLGIAVLLAGAVYELSLLAVSRAELTEAVTRRLRGGQE
                     PLAWPIETERELAAAAATTSFGMVMLGTLFPALFSRESVLELFVLLLLLAVPITLLSG
                     YLLPRWLSQGRAEHAVHLLRPLFRPWAALLRLVLPAASEATGEYRAFGRESAAVLPET
                     DTEMAMVGGVMTFAQRPVREVLTPRTELVAVADGADVAEISKIFAESGYSRIPVYRET
                     LDEIVGMVHAFDLFKQQPGDPLPIRPVGLAPASRTCGDVLVDMQRERRHLAVVLDEFG
                     GTLGIVTLEDLLRALVGEIYDEDEPVAAPDVARPALLEIDGSLPVPELEASFGVVLPG
                     GLAGTVGGRLAELAGRIPATGERLVLAGLEFDVLQASPTRVDRIVVRPGVPAPTTLGT
                     SV"
     gene            complement(3434..>4281)
                     /locus_tag="VGA78_06650"
     CDS             complement(3434..>4281)
                     /locus_tag="VGA78_06650"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX9893584.1"
                     /translation="VRVAASGAELSVRVFHPLLKLVAWADRGGLLSASKPTASSPPTA
                     DREMLHGVFALRDMSVAEVMTPRIDIVAVDVADSRDQVLETLRQSAHSRLLVYDGHPD
                     AVVGVLYAKDFLPGLIEADDWRAAVRPAAFVPEAKTLAAQLRDFQRGPSHLVVVVDEY
                     GGTAGLVTLEDVLEQIVGEIRDEHDTDEVVPIVQQSPGRWVVQGGVALAELEGALEHE
                     FGREDVDTVGGLVLAVLGHVPRVGEAIDLGPYRLVVDQVARRRVGRVVVEAITPAHQG
                     AAEEA"
BASE COUNT          692 a         1627 c         1388 g          574 t
ORIGIN      
        1 aggagcagcg gttgctgcgg ggcgagctgt cgatcttgga gcgggcctgg cggcgggaag
       61 agcggctggc ggcgatcgcg gatcgcctaa cggtgccgga gaacgtcgcg cgtcaactgg
      121 cggacctccg cctcgcggcc cgccgggacc cgagccgtcc ctcctgcccc agccactccc
      181 aatgagccgc gatggcctgg gccagctccg gtgcccccgc acccgatgaa gcggtcgtga
      241 gtacggccgg tggccgccag gcggtggatt cccctcccgc cccgtcaccc ggccgcaccg
      301 tccgaaggtc cagcgccagc cggatctccc tgagcagcag ctcggccccg ggccgatcgg
      361 ctttgttcac cgcgaagatg tcggccactt ccatcaggcc cgacttgagc gtctggatcc
      421 cgtcgcccga ctcgggcacc aggaccagca cggtggtgtc ggttgcggcg acgacggcca
      481 gctcggcctg acccactccc accgtctcga ccaggatcag atcgaacccg gcggcgtcga
      541 gcacatcgca gacctcttgc gtggtaaacg ccagacctcc cagcgcgccg cgggtggcca
      601 tcgaccggat gaagacgccc tgatcgagcg cgaccccttc catccgaatg cgatcgccca
      661 acagcgcgcc gccgctgagc ggactgctgg ggtcgacggc gaccactgcg acggtgcggc
      721 cggcttcccg ccaatggcgc accagcgcgt gggccaacgt gctcttgccg gcgcccggcg
      781 gtccggtgat ccccacccgg tgcgcacctc ccagccggtc gtgcagcgac gcgagcaatt
      841 ggtcggcggc catgccgcca ttctcgacca ctgagagggc tcgagccagc ccggcgggat
      901 cggaacggtc gggcttcacc ggagcagcag actcccggcc aggccgagca gcagggcgaa
      961 gccgcacata tcggtgaagg cggtcacgaa caccgacgac gccaccgccg gatcgatccc
     1021 gagccgctgc agcataaggg gaatgaacgc gccggcgaac cccgcgacgc attgattgca
     1081 ggccatcgcc aggaacacca ccagcccgag ccgcggcccc tgccccgtca ccaccgcgac
     1141 cgttcccacc gcgaggccca gcgccagccc gttgaagatg ccgaccgcca gctccttgcc
     1201 gatcaccccc atggcccggt tggtctggat ctgtcccagg gccagccggc gtaccgtcac
     1261 cgcgagcgcc tgggtgccgg cattcccgcc caacccggcc acgatgggca tccacgccgt
     1321 cagcgcgagg gtgcgggcca gcgtgtcctg gaacagcacc acgaccgagg cggcgagaaa
     1381 cgcggtgacc aggttgacga acagccaggg caaccgggtc tggagcgtgg tattccaggg
     1441 tgcggccagg tcttcatcgg cggagacacc gccgaagcgc agcaggtctt cggtcgtttc
     1501 cgcctcgacc acgtcgatga cgtcgtcgaa cgtcacccgg cccagcaact tcccgttgtg
     1561 gtcgaccacc gcgatggcgg gcacgttgta gcgcgccatc agccgggcca cttcttcctg
     1621 atcggtctcc ggcgccacgg tgaggtcggc cggttccatc acctcgctca ccagccggtc
     1681 ccccggattc aacaccagcg acttgaagct caagaccccc tgcagctggc gggcctggtc
     1741 caccacgaag atctggctga agtcgtcggt cacttcggcc tggcgccgca ccgactcgac
     1801 cgtcttgctc accgtgtcgt gcagcagggc ggtgaccacc tgcgcggtca tccggccgcc
     1861 ggcggtctcc tcgtcgtagc gaagcagccg gtcgacgtct tcccgatcct cgacctgcgc
     1921 gagaatccgc tcctgggtct cccgctccat tgtctggagg atgtcggccg cgtcgtcgtc
     1981 agccagctcg tcgacgattt cggccgcctg ggccggatcg agctccgcca gggtctcttc
     2041 ggcatgggcc tcggccggca tttcgaccag cgcccccgcc gagacttcgg ccggcaggcg
     2101 acgcaccacc tccaaccggg tctcgtcatc gagctgggcc agcacgtcgg ccagatcggc
     2161 cggctccagc tccggagcgc gatcgaggaa gacatcgagc cggcccgacc ggagcagcgc
     2221 cagcatctcg ggcaccggat gtctccgctg gctcataccg acgtgcccag cgtcgtcggc
     2281 gcgggaacac cgggccgcac cacgatccga tccacccggg tgggcgaggc ctgcaacaca
     2341 tcgaactcca gtccggccag gaccagacgc tcgccggtgg ccgggatgcg gcccgccagc
     2401 tccgccagtc gtcctccgac ggtaccggcc agaccccccg gcagcaccac gccgaagctg
     2461 gcctcgagct ccggcaccgg cagactcccg tcgatctcca gcagggccgg ccgggccaca
     2521 tcgggcgcgg ccaccggctc gtcttcgtcg tagatctcgc ctaccagggc ccgcagcagg
     2581 tcctccagcg tgacgatgcc cagggtgccg ccgaactcat ccagcaccac cgccaggtgg
     2641 cgccgctccc gctgcatgtc gaccagtacg tcaccgcagg tgcggctggc gggcgccaag
     2701 cccaccggcc ggatcggaag tggatcgccg ggctgctgct tgaagagatc gaacgcatgg
     2761 accatcccca cgatctcgtc cagcgtctcg cgatacaccg ggatgcggct gtagccgctt
     2821 tcggcgaaga tcttcgagat ttccgcgacg tcggccccat cagccaccgc caccagctcg
     2881 gtgcgcgggg tgaggacttc gcgcaccggc cgctgggcga acgtcatcac cccacccacc
     2941 atcgccatct cggtgtcggt ctccggcagc acggcggcac tttcccggcc gaaggcccgg
     3001 tactcaccgg tggcttccga cgcggccggc agcaccagcc ggagcagcgc ggcccagggg
     3061 cgaaacaggg gccggagcag atgcacggcg tgctccgccc ggccctggga caaccagcgg
     3121 gggagcaggt atcccgagag cagcgtgatc gggaccgcga gcagcagcag caggacgaac
     3181 agctcgagca ccgactcgcg cgagaacagc gccgggaaga gggttcccag cattaccatg
     3241 ccgaacgagg tggtcgccgc cgccgcggcc agctcgcgct cggtttcgat gggccaggcc
     3301 agcggctctt gcccgccgcg gaggcgccgg gtgaccgcct cggtcagctc ggcccggctc
     3361 accgccagca gggacagctc gtacaccgcg ccggccagca ggaccgcgat gccgaggccg
     3421 agcagcagca gcgtcatgct tcctccgccg cgccctggtg cgccggggtg atggcttcga
     3481 ccacgacccg cccaacccga cgccgcgcca cctgatctac caccaaccgg tagggaccca
     3541 gatcgatggc ctccccaacc cggggcacgt gccccagcac cgccagcacc aacccgccga
     3601 cggtgtcgac atcctcccgc ccgaactcat gctccagcgc cccctcgagc tcggccagtg
     3661 ccacccctcc ctgcaccacc cagcggcccg gcgactgctg cacgatgggg acgacctcgt
     3721 cggtgtcgtg ttcgtcgcgg atttcgccca caatctgctc cagcacgtcc tccagcgtca
     3781 ccagccccgc ggtcccgccg tactcgtcca ccaccacgac caggtgactg ggcccccgct
     3841 gaaagtcgcg cagctgggcc gcgagggtct tcgcttccgg cacgaaggcc gcgggccgca
     3901 cggcggcccg ccagtcgtcc gcttcgatga gtccgggaag gaaatccttg gcgtagagca
     3961 cccccaccac cgcgtcggga tgaccgtcat acaccagcaa ccgggagtgg gccgactgcc
     4021 gcagggtctc gagcacctgg tcccggctgt cggctacgtc gaccgccacg atgtcgatgc
     4081 gcggggtcat gacttcagcg acgctcatgt cgcgcaacgc gaagaccccg tgcagcatct
     4141 cgcgatcggc ggtcgggggc gaggaggcag tcggtttgga ggcggagagc aggccgcccc
     4201 ggtcggccca ggccaccagc ttgagcaagg ggtggaacac acgaaccgac agctcggcgc
     4261 ccgaggcggc cacccggacc a
//
LOCUS       DASWKS010000222         2733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_841431, whole genome shotgun sequence.
ACCESSION   DASWKS010000222 DASWKS010000000
VERSION     DASWKS010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841431"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VGA78_06655"
     CDS             <1..237
                     /locus_tag="VGA78_06655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893585.1"
                     /translation="MEFATFDDGDGLIETVIFPEVYRTRGHVLFDQGPFVLRGKVEEE
                     FGAVTLTVLQLDRVERMLTKVASRSPESLTRRSR"
     gene            234..758
                     /locus_tag="VGA78_06660"
     CDS             234..758
                     /locus_tag="VGA78_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9893586.1"
                     /translation="MKWILIVVGVVVALGVLVWIGGSLIPRQHRAASGIALNQPTDSV
                     WVVVRDLGALKGTWKEMTTAVRSTDSQGREVWDETVGGFAMRLIIAEEAPPHRLVANV
                     DSPPGAAFGGRWVYELAPTEGGTAVTVAEEGWIGPPPFRLMSKAMGYHKSIDQYLTAL
                     GRHFSESVTPQHLP"
     gene            906..1973
                     /locus_tag="VGA78_06665"
     CDS             906..1973
                     /locus_tag="VGA78_06665"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX9893587.1"
                     /translation="MQLQVVATGLQFPLLLTAPLTDLTRLFVVEKRGVIRIIRNGQLL
                     PTPFLDIRQKVSTGSEQGLLGLTFHPSYSTNGVFVINYTDTQGDTRIASLKVSANPDI
                     ADPASEEVFLFVDQPFDNHNGGHVTFGPFGFLFIGLGDGGSAGDPGNRAQDLTTTLGK
                     LLRYQVDDAGRVTIPTGNPLVGNPGVLWGIWSWGLRNPWRFSFDRLTSDLYVADVGQN
                     QIEEVNVVKGTDGFGRAINFGWRIMEGTRCFNPSSGCEAGGLRLPVLEYTHAEGCSVT
                     GGHVYRGQAIAGIVGHYFYSDFCSGWIRSFRYQDGAANDRREWPELNTGENVSSFGED
                     AAGELYFMTSAGRVYKLVPKP"
     gene            1970..>2733
                     /locus_tag="VGA78_06670"
     CDS             1970..>2733
                     /locus_tag="VGA78_06670"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX9893588.1"
                     /translation="MTEQLELGPTDGPVPVSPLPPREQLDTWRRAIPPEIHFGTSTWT
                     YPGWAGLVYSRRWPDQGASAKMLAEYARFPLFSTVGIDSSFYGPPQPKTLESWAKALP
                     DGFRCVSKVWDRITVHTFAGQRESKPLAGRKNPDFLNSELFRSDVYEPYRQHFGGHTG
                     PFVFEFQAIAGWGAEAPAEFAGRLDRFLGNLPPDARYAVEVRNEEFLTPAYFAVLREH
                     NVAHVFTSWTRMPPLGAQLDLDGAITTDYLIARALLR"
BASE COUNT          446 a          928 c          880 g          479 t
ORIGIN      
        1 atggagttcg ccaccttcga cgatggggac ggcctgattg aaaccgtgat cttccccgag
       61 gtctatcgca cccggggcca cgtgctgttc gatcaggggc ccttcgtcct gcgcggcaag
      121 gtggaggagg aattcggcgc cgtgacgctg acggtcctgc agctggaccg ggtggaacgg
      181 atgctcacca aggtcgcgag tcgctcgccc gagtcactaa ccaggaggtc ccgatgaaat
      241 ggatcttgat cgtggtcggt gtcgtggtcg cactcggggt gctggtctgg atcgggggct
      301 cgctcattcc gcgccagcat cgggccgcca gcggcatcgc gctcaaccag ccgaccgaca
      361 gcgtctgggt cgtggtgcgc gatctcggcg cgctcaaggg cacctggaag gagatgacga
      421 cggcggtccg aagcaccgac tcgcagggcc gtgaggtctg ggacgagacc gtgggcggct
      481 tcgcgatgcg cctgatcatc gcggaggagg caccgcccca ccggttggtc gccaacgtcg
      541 attcgcctcc cggcgcggcc ttcggcggcc gctgggtcta tgagctggcc cccacggaag
      601 gcggcacggc cgtcacggtg gcggaggaag gttggattgg tcccccaccc ttccgtttga
      661 tgagcaaggc catgggctat cacaagagca tcgaccaata cctcaccgcg ttgggccggc
      721 atttcagtga gtcggtcacg ccccaacacc tgccctgatc caagtgaacg gtgcgactac
      781 attggagcat gaagtcggcg gcccgctttg gcctcacatt cctcctcgtc gcggcagcgt
      841 gcggggacaa cggaagcatt cttcagccac cgccaccacc accctcccca ccctctccag
      901 gtggggtgca gctccaggtc gtggcgaccg gacttcagtt tccactgctg ctgaccgccc
      961 cgctcaccga tctcacccgg ctgttcgtgg tcgagaaacg gggcgtgatc cggatcatcc
     1021 ggaacggcca gctgctcccc accccgttcc tcgacatccg gcagaaggtc tcgaccggat
     1081 cggagcaggg gctgctgggt ctcacgttcc atccgtccta ttccaccaac ggcgtcttcg
     1141 tcatcaacta caccgacacc cagggcgata cccggatcgc ctccctcaag gtcagcgcca
     1201 accccgacat cgccgacccg gcctccgagg aagtctttct cttcgtcgac cagccgttcg
     1261 acaaccacaa tggcggccac gtcaccttcg gaccgtttgg gttcctgttc atcgggctgg
     1321 gtgacggcgg ctccgccggc gatcccggca accgggccca ggatctgacc accacgctcg
     1381 gcaagctgct gcgctatcag gtcgacgatg ccggccgggt cacgatcccc accggcaatc
     1441 ccctggtcgg caatcccgga gtgttgtggg ggatctggag ctggggtctc agaaacccct
     1501 ggcgcttcag cttcgaccgg ctcaccagcg atctctacgt cgccgatgtg gggcagaacc
     1561 agatcgagga agtcaacgtg gtgaaaggca cggacggctt cggtcgggcc atcaacttcg
     1621 gttggcggat catggaaggc acgcggtgct tcaacccgtc cagcggctgc gaggcgggcg
     1681 ggctccgact gccggtcctg gagtacaccc acgccgaggg ctgcagcgtc accggcggcc
     1741 acgtctaccg gggccaggcc atcgcgggga tcgtggggca ctacttctac tccgacttct
     1801 gctccggctg gatccgcagc ttccgttacc aggacggtgc ggccaacgac cggcgggaat
     1861 ggcccgagct caacaccgga gaaaacgtga gcagcttcgg tgaggacgcg gccggcgagc
     1921 tgtatttcat gacgtcggcg ggccgggtct acaagctcgt gcccaagccg tgaccgagca
     1981 gttggaactg ggaccgacgg acggtcccgt tcccgtctcc cccctccccc cgcgggaaca
     2041 gctcgatacc tggcggcggg cgattccgcc tgagatccac ttcggaacct cgacctggac
     2101 ctatcccggc tgggccggcc tggtgtattc gcgccgctgg ccggaccagg gtgcctcggc
     2161 gaagatgctg gcggaatacg cccgcttccc gctcttcagc actgttggga tcgactcgag
     2221 cttctacggc ccgccccaac ccaagaccct ggagagctgg gccaaggcgt tgcccgacgg
     2281 atttcgctgt gtcagcaagg tttgggatcg gatcacggtt cacaccttcg ccggccagcg
     2341 ggagtcgaag ccgctggcgg gccggaagaa ccccgacttt ctcaattccg agctgtttcg
     2401 gtccgatgtc tatgagccgt accggcagca cttcggcgga cacaccggcc cgttcgtctt
     2461 cgagttccag gccatcgccg gctggggcgc ggaggcaccg gcggagttcg ccggccggct
     2521 ggatcggttt ctcgggaacc tgccgcccga tgcccgctat gccgtggagg tgaggaacga
     2581 ggagttcctg accccggcct acttcgcggt gctccgggag cacaacgtgg ctcacgtgtt
     2641 cacctcgtgg acccgcatgc cgccgctggg cgcccagctc gatctggacg gggccatcac
     2701 caccgattac ctgatcgccc gcgcgctgct ccg
//
LOCUS       DASWKS010000223         1735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1591642, whole genome shotgun sequence.
ACCESSION   DASWKS010000223 DASWKS010000000
VERSION     DASWKS010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591642"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1287
                     /locus_tag="VGA78_06675"
     CDS             <1..1287
                     /locus_tag="VGA78_06675"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX9893589.1"
                     /translation="TEVPTEVPTAAPTEPVTMLEGDPNLQTITFWHAMSSGANLEGMT
                     AVVAEFNANNEFGITVEAVAQGSQSELETAVNGAIATGELPNLTMGFPNGLVRWYGLD
                     VIASLSPFISDPVYGLSADAMAAIYPGPYSSGTLPDGNQVGIPMHQSAQVIFYNHTWA
                     QELGFDGPPETSADFKAQACAAAAANNADDNADNDGTGGYVYFPDASMVSPWIWAFGG
                     EIVNADGTGYELNSQAALDVALFFKDLSDSGCTLFTPSFPNPEFAGRLALFATSSTAG
                     MPFQQSAMDEVANADEWGAIPFPGPDGSKYVDAFGQMVGVVRTNADQDLASWVFLKYL
                     TSPETQATWIGFTGFFPSQTTTDVGTRPTDDPIWAGALALMEFGKAEPNLAAHGSVRG
                     AIRDAYFAVLDAADEAAIVALLEALNTTAADLVAES"
     gene            complement(1466..>1735)
                     /locus_tag="VGA78_06680"
     CDS             complement(1466..>1735)
                     /locus_tag="VGA78_06680"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEX9893590.1"
                     /translation="GFRAAFPDLHYTIEDEIAAGDKVIHRLTGHGTMKGEFQGMPATG
                     KHGMWSEMHIARFDGGKVVEHWAVVDQMGMLVSLGAMPAPGQAPA"
BASE COUNT          310 a          566 c          555 g          304 t
ORIGIN      
        1 accgaagtgc cgaccgaggt accgaccgcc gcgccgaccg agccggtcac gatgctggag
       61 ggagacccga acctccagac catcaccttc tggcacgcga tgagctccgg ggccaacctg
      121 gagggcatga ccgccgtggt agctgagttc aatgccaaca acgaattcgg gatcacggtg
      181 gaggcggtcg cccagggcag ccagagcgag ctcgagacgg ccgttaacgg agccatcgcc
      241 accggcgagc tcccgaacct gaccatgggc ttccccaacg gcctggtgcg ctggtacggc
      301 ctggatgtga tcgccagcct gtcgccgttc atcagcgatc cggtctatgg gctatcggcg
      361 gacgcgatgg cggcaatcta tccgggcccc tacagctccg gtaccttgcc ggatggcaat
      421 caggtgggga tccccatgca ccagtcggcg caggtgatct tctataacca cacctgggcc
      481 caggaactgg gcttcgacgg tccgccggag acctcggccg atttcaaggc acaggcctgc
      541 gccgcggcgg cagccaacaa tgccgatgac aacgccgaca acgacggtac cggcggctat
      601 gtgtacttcc cggatgcctc gatggtgtca ccctggatct gggccttcgg cggcgagatc
      661 gtgaacgccg acgggacggg ttacgagctg aacagccagg ccgcgctgga cgtggccctg
      721 ttcttcaagg acctgtcgga cagcggctgc accctgttca cgccgagctt cccgaacccc
      781 gagttcgccg gtcggctggc gctgttcgcc accagctcga cggccgggat gccgttccag
      841 cagtcggcga tggatgaagt tgccaacgca gacgagtggg gcgcgattcc gttccccggc
      901 ccggatggca gcaagtacgt ggacgccttc ggccaaatgg tcggggtcgt gcggacgaac
      961 gcggatcagg acctggccag ctgggtcttc ttgaagtacc tgacctcccc cgagactcag
     1021 gcgacctgga tcggcttcac cgggttcttt ccatcccaaa ccactaccga cgtcgggacc
     1081 cgcccaacgg acgatccgat ctgggccgga gcgctggcgt tgatggagtt tggaaaagcg
     1141 gagccgaacc tggcggccca tggttccgtg cggggcgcga tccgggacgc gtactttgca
     1201 gttctggatg cagccgatga ggcggctatc gtggcgctgc tcgaggcttt gaacacaacc
     1261 gcggccgact tggtggccga gtcctagcgc tcagctcgaa ctacagtgtg cgaaatctcc
     1321 caccggcggt tctccggtgg gagattgttt tcggcgcgtg cgagctcctg cgccaccgct
     1381 ctgagaccgg aatcaattag aaggccacaa tgctccagcg ttgcggcacc gggacgcgtg
     1441 gtcttggcag tcgtgtacga tcaggctagg ctggggcctg cccgggcgca ggcatcgccc
     1501 ccagcgagac tagcattccc atctggtcaa cgaccgccca gtgttcaacg accttgccac
     1561 cgtcgaagcg ggcgatgtgc atctcgctcc acatcccgtg cttcccggtt gctggcatcc
     1621 cctgaaactc gcctttcatg gtgccgtgcc ccgtcaagcg gtggatcacc ttgtccccgg
     1681 ccgcgatctc gtcctcgatg gtgtaatgca ggtcaggaaa agcagcccga aaacc
//
LOCUS       DASWKS010000224         2051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_478170, whole genome shotgun sequence.
ACCESSION   DASWKS010000224 DASWKS010000000
VERSION     DASWKS010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478170"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..832
                     /locus_tag="VGA78_06685"
     CDS             161..832
                     /locus_tag="VGA78_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893591.1"
                     /translation="MADSYVFPTVRSSRSREAGVIPPRFSRFVFGGVFGLATLVAVLF
                     TMGGGPRLPLLIVATFWGVLGIVSAIFNAIDRVPDALSSLLANVGLMRHPPGFSQIEA
                     LVAQGHYEAAAESYRMRARREAERVEATVRRAWLLAGPLGAAAQAVAELKALREPGDL
                     SPAEDVRVGLALADLQDDRRESSGEALKELRRLLDRYPDSPYAREVRMRLEHLRRDHF
                     PEASA"
     gene            829..1887
                     /locus_tag="VGA78_06690"
     CDS             829..1887
                     /locus_tag="VGA78_06690"
                     /inference="COORDINATES: protein motif:HMM:NF014769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893592.1"
                     /translation="MSPRPRLDPSIFHLPVERMRAGYYSDKYFVRAREILLRDGYRPR
                     VTLQVFGKQPAFLGGIDEAIAILKLCAMEWSDLEVWALHDGDEIEPWETVLLIEGPYD
                     AVAHLETLYLGVLARRTKVGTNTRRVVEAARPKEIMFFPARHDHWLVQTGDGYAAHIA
                     GAIGVSTDAQASWWGSEGVGTVPHGLIAAYGGDTVLASRKFADNMDPGIRLVTLVDFE
                     NDCVRTSLEVAEALGEVLYGVRLDTSEMLVDRSVVPQMGRFRPTGVCPQLVWNVRHGL
                     DRAGYPGVKIIVSGGFTADKIREFEQQGVPVDAYGVGSSLFQGRFDFTADVVRHEGRP
                     CAKVGREYRPNPRLERVV"
BASE COUNT          316 a          642 c          713 g          380 t
ORIGIN      
        1 aagacgcgaa ccgggggtgg tgtcaattgg tacggtcgaa gcagtcgaag tagtcgaagg
       61 ggtcgagggg gggaggtcct gcggtaaccg cctccgacca ccttcgaccc cttcgactgc
      121 ttcgaccccc ttcgaccccg catagcggct tgccgcccgt atggcagact cctacgtttt
      181 ccccactgtg cgctcctccc ggtcgcgcga agccggggtc atcccgccgc ggttttcccg
      241 cttcgtgttc ggcggcgtgt tcggcctcgc caccctggtg gcggtcctct ttaccatggg
      301 cggggggccc cgtcttccgc tgcttattgt cgccaccttc tggggtgtgc tggggatcgt
      361 ctcagccatt ttcaacgcta tcgatcgggt cccggacgcg ctctcgtcgc tgctggccaa
      421 cgtggggttg atgcgccacc cgcccggctt ctcccagatc gaggccctgg tggcccaggg
      481 ccactacgag gccgcggcgg agtcgtaccg gatgcgggcg cgacgtgagg ccgaacgggt
      541 cgaggcgacg gtccggcgtg cctggctgct ggccggcccg ctgggcgccg ccgcccaggc
      601 ggtggcggag ttgaaggcac tgcgggagcc gggcgacctc tcgcctgccg aggatgtgcg
      661 ggtcgggctg gcgctggcgg acttgcagga tgaccggcgg gaatcgtcgg gggaggcgct
      721 caaggaactg cggcgtctgc tcgaccggta tcccgattca ccctacgcgc gagaggtccg
      781 gatgcggttg gagcatctgc ggcgggacca ctttccggaa gcttccgcat gagtccccgg
      841 ccgcggctcg atccgtccat ctttcatctg ccggtcgagc ggatgcgagc aggctactac
      901 tccgataagt actttgtccg ggcccgcgag attctgctgc gcgacggcta ccggccccgg
      961 gtcacgctgc aggtgttcgg gaagcagccg gccttcctgg gcgggatcga cgaagccatc
     1021 gccatcctca agctgtgcgc catggaatgg agcgacctcg aggtctgggc gctccacgac
     1081 ggcgacgaga tcgagccctg ggaaaccgtg ctgctgatcg aagggcctta cgacgcggtg
     1141 gcccatctcg agacgctcta cctcggagtg ctggcccggc gcaccaaggt cgggaccaac
     1201 acccggcggg tggtcgaagc cgcccgtccc aaggagatca tgttcttccc cgcgcgacac
     1261 gatcactggc tggtccagac cggtgatggg tacgcggccc acatcgccgg tgcgatcgga
     1321 gtgtccaccg atgcccaggc atcctggtgg ggcagcgaag gggtcggaac cgtgccccac
     1381 ggcctgatcg ccgcttacgg cggtgatacg gtcctggcga gccgcaagtt cgccgataac
     1441 atggaccccg ggatccggct tgtgaccctg gtggacttcg agaacgactg cgtgcgcacc
     1501 tcgcttgaag tggccgaagc gctgggcgag gtgctgtacg gagtgcggct cgataccagc
     1561 gaaatgctgg tggaccggtc ggtggtaccg cagatgggcc ggttcagacc gaccggggtc
     1621 tgcccgcagc tggtctggaa tgttcgccac ggtctcgacc gggccggcta tccaggtgtc
     1681 aagatcatcg tgtcgggcgg cttcaccgcg gacaagatcc gcgagttcga acagcagggc
     1741 gtgccggtcg atgcttacgg cgtcggttcc tcgttgtttc agggccggtt tgatttcacc
     1801 gccgacgtgg tccggcacga gggcaggccc tgcgcgaagg tcgggcggga ataccggccg
     1861 aatccgaggc tggaacgcgt ggtgtaagcc gcattgacga ttgacgattg ccgatttcgt
     1921 ggagccggca tcgcaatcgt caatcgtcaa tcgtcaatcg tcaatgttcg cagggaagct
     1981 agtatgcgat ctgacctgat cttttgggac gtcgataccc aggtcgactt catgaagagc
     2041 gagggcaagc t
//
LOCUS       DASWKS010000225         3584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1592934, whole genome shotgun sequence.
ACCESSION   DASWKS010000225 DASWKS010000000
VERSION     DASWKS010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1592934"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(249..2492)
                     /locus_tag="VGA78_06695"
     CDS             complement(249..2492)
                     /locus_tag="VGA78_06695"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9893593.1"
                     /translation="MGADSGSQLGKATARVDGLAKVTGEALFPGDIDMPNQAYLKILF
                     AGRPHAVIRRLDPSPAEVMPGVIAVFTAKDVPVNEYGLLLPDQPVLCGPGSAKPYADR
                     VRFVGDQVALVVAESEALAAAAVRRIEVDYEDLPVVTDPLAARQADAALLHPDRGSNV
                     FSHNRIRKGDVAKGFAAAGVVIESEYRTPAQEHAYLQPEAGLAYIDDEGRVTVEVAGQ
                     WAHEDQEQIAHALDLPREQVRVKYPAIGGAFGGREDMSVQIVLALAAWRLHQRGIDRP
                     VKIIWSREESILGHHKRHRYVIRSKWGATREGKLLAAEVEVVQDGGAYAYTSTKVLGN
                     STLMCTGPYEIPNVNVDAYSVYTNHIPGGAFRGFGGPQAAYSAELQMNKLAEALGLDP
                     VEIRMRNLLKEGALLSVGTPLPKGVSIGKVVESCAENAGWSRSADGWQRPAGHSLGEP
                     AEPHLRRGIGLACGFKNVGFSFGFPEQCWATIELHGGVEIEEVVLRHAGAEVGQGAHT
                     AMVQMAAEAVGVSLDKVRIDASDTATSENSGSASASRMTFMAGNAIRGAVAAAMLKWQ
                     DEDRPAIASYQYLPPPTTPYDPETGTTQPNFAYGYVAEAATVEVDTETGSVRILEVVC
                     ADDVGRVVNPQGVRGQIEGGVVQAAGYAILEDFREDGGRAQTSLLSTYLIPGVLDIPD
                     RVQSVVLEYEDPLGPWGVRGMAEMPFIPLTPAVVSAVHDALGIWFDEFPLTPERVFWG
                     LRAARVG"
     gene            complement(2519..2809)
                     /locus_tag="VGA78_06700"
     CDS             complement(2519..2809)
                     /locus_tag="VGA78_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893594.1"
                     /translation="MILIAVMGVAGYAFSGWFLEQNVVNHWIYIPPQLYNPEVPAVLD
                     FLGNGNMLRFAVALIFVLTAFAILNFVYALAFPIPPGEFDMPTPKRRPRKHR"
     gene            complement(3027..>3584)
                     /locus_tag="VGA78_06705"
     CDS             complement(3027..>3584)
                     /locus_tag="VGA78_06705"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9893595.1"
                     /translation="DGYPQRPVTLWGPEEWHWRAKLDESIVHSSETPIETTVNGVRSH
                     FATGQEKSLLRLLREEGGLTGTKEGCAEGECGACTVSLDGMAVMACMVPAPRAHGAAI
                     VTVEGLADDGRLHPIQQGFIELGAVQCGYCTPGFLMSGAMLLNERPDPSRGEIQEAIT
                     GNLCRCTGYYSILEAFKRAAQLRTA"
BASE COUNT          616 a         1266 c         1095 g          607 t
ORIGIN      
        1 ctgccaaggc caccaaccgc cggaccgcca acggctgctc gatctcggtg atcacgaccc
       61 agaaaccgct gcgccacagc cgggccgcga ccccggtggc caggtcgtcg ccgccgcgta
      121 agacaaccag cggaggagag atcttcaatt cgggcattgg ccggagactc gtgatgactg
      181 atctgccggg gcgtggcggg gtctatgctt cgaaggacgt agcggtcagc ttccgaggca
      241 gcgggcttct atcccacccg ggccgcgcgc agcccccaga acacccgctc cggggtcagt
      301 ggaaattcgt cgaaccagat ccccagcgca tcatggaccg cgctcacgac cgccggggtc
      361 aacgggatga acggcatttc cgccatcccc cgcacccccc aggggccaag cgggtcctcg
      421 tactcgagca cgaccgactg cacccgatcc ggaatgtcca agactccggg aatcaagtag
      481 gtcgagagca ggctggtctg cgcccggccg ccgtcctcgc ggaagtcctc cagaatcgca
      541 tatccggcgg cctgtaccac acccccctca atctgacccc gcactccctg cgggttgacc
      601 acccggccga cgtcatcggc gcacacgact tccaaaatcc gcaccgagcc ggtctcggtg
      661 tcgacctcga cggtggccgc ctccgccacg tagccgtagg caaagttggg ctgagtcgtg
      721 ccggtctccg gatcgtatgg agtggtcggc gggggcaggt actggtagga agcgatcgcc
      781 ggtcgatctt cgtcttgcca cttcagcatt gccgcggcga ccgcgccccg gatcgcattg
      841 cccgccatga aggtcatgcg cgaggcggaa gctgaaccgc tgttctcgct ggtggccgtg
      901 tccgatgcgt cgattcgcac cttgtctaga gagaccccga ccgcctcggc cgccatctgg
      961 accatagccg tgtgagcacc ctgccccacc tcggccccgg cgtggcgcaa cacgacttcc
     1021 tcgatctcga ccccgccgtg gagctcgatg gtcgcccagc actgctcggg aaaaccaaaa
     1081 gagaacccga cgttcttgaa gccgcaggcc aggccgatcc cccggcgcaa gtgtggctcc
     1141 gccggctcac ccagcgagtg gcccgcgggc cgctgccacc catctgcgga tcggctccaa
     1201 ccggcgttct cggcgcagct ctccactacc ttgccgatac tgacgccttt ggggagcggg
     1261 gtccccaccg agagcagggc tccttccttt aacaggttgc gcatccgaat ctcgaccggg
     1321 tcgagcccca gcgcctcggc cagcttgttc atttgaagtt cggcggaata tgcagcctgc
     1381 ggtccaccga acccgcgaaa ggcgccgccc gggatgtgat tggtgtaaac cgagtaggcg
     1441 tccacattga cgtttggaat ctcgtaaggt ccggtgcaca tcagggtcga gttcccgagc
     1501 accttggtgg aggtgtaggc ataggctcca ccgtcttgga ccacttccac ctcggccgcc
     1561 agcagcttcc cctcccgggt ggcgccccat ttcgagcgga tcacgtagcg gtgccgcttg
     1621 tgatggccga ggatcgactc ctcccgggac caaatgatct tgaccgggcg gtcgatgccg
     1681 cgctggtgca gccgccaggc cgccagtgcc agcacgatct ggaccgacat gtcctctcgt
     1741 ccgccgaaag cccccccgat ggcagggtat ttcacccgca cctgctcccg cggcaggtcc
     1801 agcgcgtggg cgatctgctc ctgatcttca tgggcccact gcccggccac ttcgacggtg
     1861 actcgacctt cgtcgtcaat gtaggccagg ccggcctccg gttgcaggta ggcatgctcc
     1921 tgggccgggg tacggtactc gctctcgatc acgaccccgg cagccgcgaa ccctttggca
     1981 acgtccccct tccggatccg attgtgcgaa aaaacgttgc tgccgcgatc cggatgcagc
     2041 agcgcggcgt ccgcctgccg ggccgccagg gggtcggtca cgaccggcag gtcctcgtag
     2101 tcgacctcga tccgccggac cgcggcggcc gcgagcgcct cgctctccgc caccaccagt
     2161 gccacctgat cgccgacaaa acggacccgg tcggcatagg gcttggccga tcccggtccg
     2221 cacaacaccg gctgatccgg caggagaagg ccgtactcgt tcaccggcac gtccttggcc
     2281 gtaaaaaccg cgatgacgcc cggcatgact tcggcgggcg aagggtcgag gcgccggatg
     2341 accgcgtggg gtcgtccggc aaacagaatc ttcaggtagg cctggttcgg catgtcgatg
     2401 tcgccgggga acagcgcctc gccggtgacc ttcgccagcc cgtccacccg ggcggtcgct
     2461 ttgccgagct gggatccgga gtcagcgccc atggcagcca ggaagcgggg gcccgagatc
     2521 agcggtgctt ccgcggccgg cgcttcggcg tcggcatgtc gaattcgccg ggtgggatcg
     2581 ggaaggccag ggcatacacg aaattcagaa tggcgaacgc ggtgaggaca aagatcagcg
     2641 ccaccgcaaa gcgcagcatg ttgccgttgc caaggaagtc gagcaccgcg ggaacctcag
     2701 gattgtacag ctggggcgga atgtagatcc aatgattgac gacattctgc tcgaggaacc
     2761 agcccgagaa cgcgtagccg gccaccccca tgaccgcgat caagatcacc cccactccgc
     2821 gccagatggg gttcgtctcc cgcttcttgg cccgctcttg ctcgagttgt cggaacttcc
     2881 aagagcctct tctgcccata cgatcctccc gccccttagc gactgaactt ccgccgctgg
     2941 ttgaggtccg accccattct agactcgggc ggacacccgg tctaccagcc tgatcgtgct
     3001 agttcggcga tggtaccggg cctggctcac gccgttcgga gctgggcggc ccgtttgaag
     3061 gcctcgagga tcgagtagta ccccgtgcag cggcacaggt tccccgtgat ggcctcctgg
     3121 atctcgcccc ggctcgggtc gggacgttcg ttcaacaaca tcgcgcccga catcagaaat
     3181 cccggcgtgc agtagccgca ctgcaccgct ccgagctcaa tgaagccctg ctgaatcggg
     3241 tgcagacggc catcgtccgc cagcccttcc accgtcacga tcgccgcccc gtgcgccctg
     3301 ggggccggga ccatgcaagc catcactgcc atgccgtcca acgagaccgt gcacgcgccg
     3361 cactcaccct ctgcgcagcc ttctttcgtc ccggtcaatc caccctcctc ccgaagcagc
     3421 cgcagcagcg atttctcctg gcccgtggca aagtgactgc gcactccgtt gaccgtcgtc
     3481 tcgatcggag tttccgaaga gtgaacgatc gactcgtcga gtttagcccg ccagtgccac
     3541 tcctcgggac cccacagggt gaccggtcgc tgaggatagc cgtc
//
LOCUS       DASWKS010000226         3990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3077562, whole genome shotgun sequence.
ACCESSION   DASWKS010000226 DASWKS010000000
VERSION     DASWKS010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3077562"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..624
                     /gene="apaG"
                     /locus_tag="VGA78_06710"
     CDS             223..624
                     /gene="apaG"
                     /locus_tag="VGA78_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HEX9893596.1"
                     /translation="MKMPPLFYKLSNGVRITVRPWFLAAQSRPHAGHFVFGYQVRIEN
                     VSDGPVQLLSRYWRIRDANGEETEVKGEGVLGEQPVIAPFRAHEYQSYCVLKAPTGSM
                     VGHYRFTRKDGTRFDAAIPEFVLDAGATAGS"
     gene            complement(718..1623)
                     /gene="nuoB"
                     /locus_tag="VGA78_06715"
     CDS             complement(718..1623)
                     /gene="nuoB"
                     /locus_tag="VGA78_06715"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEX9893597.1"
                     /translation="MIRFLRARLQQGTRTQPSLDDGAELPERYRGRPGFDPTRCRDGC
                     ASCRPGFPSGLLTVDGEGRTGLDVGAGLFAPEEASTCPHQAISFTNDYRMATRSREAL
                     LTPDGELRLAEALDHQMRRLFGRSLRLRSVAAGSCNGCEAELVALGNVVFDLARFGVQ
                     FVASPRHADGMVVTGAVSRNMREALYRTYEAIPEPRLVIAVGACAINGGPFRGSPEVA
                     NGVPPDIPVDLLIPGCPPHPLTVLDGLLRLLGRLDGAPRGPRARHASASPSRVTSGDE
                     GNESPVAGGEVAAPPRPSQSDLFEL"
     gene            complement(1646..3097)
                     /locus_tag="VGA78_06720"
     CDS             complement(1646..3097)
                     /locus_tag="VGA78_06720"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893598.1"
                     /translation="MPLDPVESFRETVAEATRAAWRLVSFFGFPDGDGTRLLAVLADD
                     ERGELGATSTLVEDRYPALTPVCPEAHYFECEIAEQCGVEPLGHPALRPVRRHPPDHA
                     ARPVDPDSYDREAYPFFQIAGREVHEVAVGPVHAGIIEPGHFRHQAHGEEVLQLEIML
                     GYQHRGVERLLEQLDRTRAVLVAESIAGDSVIGHGGAHCAAIEALGRARKTPRAQAIR
                     GIALELERLANHLGDLGAIAGDIAYQPGANYFGRMRGECLNLLLALSGNRYGRGLIRP
                     GGTLFEIPPELGAVVVDRLHRLRGELQPVADLMLGNASVQTRLEGAGTLTRKQCFDLG
                     VVGPPARACDVRRDVRHDHPYGLFRFAHIPVATAWAGDVQARALVRWVEVQRSLDFVI
                     EQVTALPRGAIQVACGALHAGELVVVMSEGWRGEIAHVVLTDERGGIRRYKVVDPSFH
                     NWSALAAVMPGNQISDFPLCNKSFNLSYAGHDL"
     gene            complement(3151..>3990)
                     /locus_tag="VGA78_06725"
     CDS             complement(3151..>3990)
                     /locus_tag="VGA78_06725"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX9893599.1"
                     /translation="AGFIFLLVGYGTKMGLAPLHSWKPDTYGEAPSLVAGLMAGALTS
                     CAFLGLARIAQVMAAAGQTDFMRPPLLALGITSLVVSAGFVIGQTDLKRLLAYSSVEH
                     MGILVLALGIGGAGGYGAMLHLVSNGLTKGLIFLAVGNVVLFYRASEAAAIRGVLQRA
                     PWSGALLVAGLFAVTGSPPFGLFLSEITILGAAIRGGFTWVAVVMVLLLSIIFIGMAK
                     MILDVVYGEAPANAEPVRESFSLIAGPVALGLLVLMLGVYLPAPFRVLLGEAARALGG
                     TSP"
BASE COUNT          716 a         1409 c         1298 g          567 t
ORIGIN      
        1 ggggcgtggt ggtccgcgac ggcctggcct acgtgaacga catgtacaac gggctctgga
       61 tcatccggat ggagccgcgg cggagagaac tgacaccctg aaaccgacat tatcgattgt
      121 cgattgacaa ttgacgattg cgtcgggcga ttatcgatcc ccgagccgca tgctgaagct
      181 ccggtgagca atcgtcaatt gttaattgtc aatcgacaat ggatgaaaat gcccccactg
      241 ttctacaaac tctcgaacgg ggtccgcatt accgtgcgcc cctggttcct ggcagcccag
      301 tcccggcccc acgctgggca tttcgtgttc gggtatcagg tgcggatcga gaacgtgagt
      361 gacgggccgg tgcagctctt gagccgctac tggcgcatcc gcgacgccaa cggcgaggaa
      421 accgaggtca agggcgaggg ggtgctgggc gagcagccgg tgatcgcccc gttccgggcc
      481 cacgagtacc aaagttactg cgtgctcaag gcccccactg ggtcgatggt gggccattac
      541 cgcttcaccc ggaaggacgg gacccgcttc gacgccgcga ttccggaatt cgtcctggac
      601 gccggggcca ccgccggcag ctagcggccc cgatgctgtt cccgcagtct tgagtcgcct
      661 cctcgacgca aatgaccagg cggcccgtga tgcccggctg ggcgactttg tcgacgccta
      721 caactcgaac aggtcggatt gactcggccg gggcggggcg gcgacctcgc cacccgcgac
      781 cggtgactcg ttaccctcgt cgccactcgt gactcgggac ggggaggcgc tcgcgtgcct
      841 ggcgcgtggc ccgcgaggcg cgccgtccag ccgccccagc agccggagca ggccgtccag
      901 cacggtcagc gggtggggcg gacagccagg aatcaggagg tcgaccggga tgtcaggcgg
      961 gaccccattg gccacctcgg gacttccccg gaagggtccg ccgttgatgg cgcacgcccc
     1021 gacggcgatg accagccggg gctcggggat cgcttcatag gtccggtaga gcgcctcccg
     1081 catgttgcgg ctcacggctc cggtcaccac catcccgtcg gcgtgacggg gactggcgac
     1141 gaactggacc ccgaatcggg ccagatcgaa gaccacattc cccagagcca ccagctccgc
     1201 ctcgcagcca ttgcagctcc cggccgccac cgaacggagc cggagcgatc gcccgaagag
     1261 ccgccgcatc tggtgatcca gcgcttccgc cagccggagc tcgccgtcgg gagtcagcag
     1321 cgcctcccgg gaccgcgtcg ccatccggta gtcgttggtg aagctgatgg cctgatgggg
     1381 acaggtcgag gcctcctcgg gcgcgaacag acccgcgccg acatccaacc cggtccggcc
     1441 ctcgccatcg acggtgagga gcccggacgg aaaacctggc cgacagctcg cgcatccatc
     1501 acgacatcgc gtcggatcga acccgggccg gccccgatat cgttcgggga gttccgcccc
     1561 gtcgtcgagg gagggctggg tacgggtgcc ctgctggagt cgcgcgcgaa ggaatcggat
     1621 catcgacggt ccccccacga ccgcatcaca gatcgtgccc cgcgtaggag aggttgaagc
     1681 tcttgttgca gagcgggaag tcggagatct gattccccgg catcacggcg gccagggcgc
     1741 tccagttatg gaaggacggg tcgaccacct tgtagcggcg gattccgccc cgctcgtcgg
     1801 tcagcacgac atgggcgatc tctccccgcc acccttcgct catcaccacc accagctcgc
     1861 cggcatgaag ggccccgcac gccacctgga tcgccccgcg ggggagtgcg gtgacctgct
     1921 cgatcacgaa gtccagcgaa cgctggacct ccacccagcg aaccagcgcc cgggcctgga
     1981 cgtcaccggc ccaggccgtc gcgaccggaa tgtgcgcgaa ccggaacagg ccgtaggggt
     2041 gatcgtgccg gacgtcgcgg cgcacgtcgc aggcccgggc cggcggtccc accacgccga
     2101 gatcgaaaca ctgcttccgg gtgagcgtcc ccgcgccctc cagccgggtc tggaccgagg
     2161 catttcccag catcaggtcc gcgaccggct gcagctcccc ccgaagccga tgcagccgat
     2221 cgactacgac cgctcccagc tcgggcggaa tctcgaacag ggtaccgccc ggccggatca
     2281 gcccgcgacc atagcggttg ccggacagcg ccagcagcag gttcaggcat tccccccgca
     2341 tccgtccgaa gtaattggcg cccggctggt aggcgatgtc gccggcgatg gcacccagat
     2401 ctccgagatg gttggccagc cgctccagct ccagcgcgat gccgcgtatg gcctgggccc
     2461 gcggggtctt ccgggcccgg cccagcgcct cgatcgcggc acagtgggct ccaccatgac
     2521 cgatcacgct gtcgccggcg atcgactccg cgaccagaac ggcccgggtg cggtccagct
     2581 gctccagcag ccgctcgacg ccccggtgct ggtagcccag catgatctcc agctggagca
     2641 cttcttcgcc gtgggcttga tgccggaagt ggcccggttc gatgatcccg gcgtgcaccg
     2701 gtccgaccgc gacctcgtgt acctcccggc cggcgatctg gaaaaacgga taggcctcac
     2761 gatcgtagct gtccgggtca accggccggg cggcgtgatc aggtggatgc cggcgcaccg
     2821 ggcggagcgc cgggtggccc agcggctcga ccccgcactg ttccgcgatc tcacactcga
     2881 aatagtgggc ttcgggacag accggggtga gcgcgggata gcgatcctcg accagcgtac
     2941 tggtggcccc gagctcgcct cgctcatcgt cggccagtac ggccagaagc cgggtgccat
     3001 cgccatccgg aaagccgaag aaagacacca gccgccaggc ggcccgagtc gcctccgcga
     3061 ccgtctcgcg gaaggactcc accgggtcga gtggcacgcc ggcgaacgga atcgcgcgtc
     3121 gattccgcag gcccagttcg tcgaatgcgc tcagggcgaa gtccctccca gcgcccgggc
     3181 cgcttcaccc agcaggaccc ggaacggcgc gggcagatag acgccgagca tcagcaccag
     3241 gagcccgagc gcgaccgggc ctgcgatcag cgaaaaactc tcccgcaccg gctcggcatt
     3301 cgccggtgcc tctccataga cgacatccag aatcatcttg gccatcccta tgaagatgat
     3361 ggacaacagc aggaccatca ccaccgccac ccaggtgaag cccccccgga tcgcggcccc
     3421 gagaatggtg atttcgctga ggaagagacc gaaaggcggc gagccggtga ccgcgaacag
     3481 gccggccacg agcagcgcgc ccgaccaggg cgcccgctgg agcacgcccc gaatcgcggc
     3541 cgcctccgac gcgcgataga acagcaccac gttcccgacc gcgaggaaga tcaggccctt
     3601 ggtcagtccg ttgctcacca ggtgcagcat ggcgccgtaa ccgcccgccc cgccgatgcc
     3661 cagcgccagg accagaatcc ccatgtgttc cacgctcgaa tacgccagca gccgcttcag
     3721 atcggtctga ccgatcacga acccggcact gaccaccagt gaggtaattc ccagagccag
     3781 gagcggcgga cgcatgaaat cggtctggcc cgcagcggcc atgacctgag cgatgcgggc
     3841 cagccccagg aaggcgcagc tggtgagcgc ccccgccatc aggccggcca ccagactggg
     3901 cgcttcaccg taggtatcgg gcttccagga atgcagcgga gccagaccca tcttggtgcc
     3961 gtaccccacc aacaggaaaa tgaaaccggc
//
LOCUS       DASWKS010000227         3055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_481891, whole genome shotgun sequence.
ACCESSION   DASWKS010000227 DASWKS010000000
VERSION     DASWKS010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481891"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3055)
                     /locus_tag="VGA78_06730"
     CDS             complement(<1..>3055)
                     /locus_tag="VGA78_06730"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893600.1"
                     /translation="RIIDFTTDEGTWLSLDVSPDGRWIAFDLLAHIYRLPIAGGEAEA
                     LTQNSGMALNFHPAFAPDGDRIAFISDRQGQNNVWVMRSDGGDPRPVFLDRETRFMAP
                     AWAPDGSRLAAVRVYPTPGRGWHRQVAEIWELPLDGAEPRRLLADRLTQYDAPRYSPD
                     GKYLYFQVSYSTGEGLGMLFAGHRIQRLELATGTVENVRSSEPAALSPEYAEALRRTG
                     WAADNAIDPPAALAPAPSPDGSRIGFALERRDTVFTYRGHEYAPSTGLVVRDLATGTE
                     RMILAPAAKDLTQVNAQYGYGSFPRFAWTPDGGAVIAWEGGKLKRVDVTSGAVTDIPF
                     TAHVHREISQVVRSRVAIDDSAFQVRSIQWPAAAPDGSRLAFVAVGKVWVMDLPGGTP
                     SPLTTPMDGTVQLTPSWSPDGQSMAFATWNSKERGHVWIVPSRQGTPRQVTREPGEYL
                     HPIWSPDGGTLFVNRAPEGNGWSRREGWNVVSIPVAGGSATQLAVTNGPVPVYVGLDS
                     RVYFQYQDRTDRTTGLLYYPFPTDSALALTIKVRSVAPTGGPPTEHVEFPARWRAGNE
                     PMLSPGGQWVAFQSARFLYISPVASDGGLPAINPDQNDSVPGRRFIDPRGGIFHSWRD
                     STTLQFASGPRYVTYDVRSGNTTTVDIDLRIPRPTPAGTLALTNVKIITVDSNQVIER
                     GTVLVRGARITCVGECDPSGADRVMDLTGKVVMPGLVDLHAHHTDVAAGVVTADRWMS
                     RIDLAYGVTTILDPAADSKEAFPLAELIDAGTLAGPRTFSVAELLIHPGVAWGDEKII
                     RTQEDANREINRRADWGAISVKNYRQTGRFQHQLLLAAARERGITLTSEGGPLYFDVG
                     VVMDGQTGWEHLIANLPIYRDVATFFGQARAVYSPTAIVAGHVQGSMHWFRPRHDLLH
                     DAKYRRFMPEAQIRGRTAADRLVPKSSLSFPIIAEGLADIVRAGGFGALGEHGEQPGI
                     GTHWELWSYAEALTPLEALTVATIHGAYFIGLDQETGSITSGKLAD"
BASE COUNT          506 a          990 c         1052 g          507 t
ORIGIN      
        1 ggtcggccag cttgccggag gtgatagagc cggtttcctg gtcgagaccg ataaagtagg
       61 cgccatggat ggtggccacg gtgagcgcct cgagaggagt gagcgcctcg gcatagctcc
      121 acaattccca gtgggttccg atgccgggct gttcgccgtg ctcgcccagc gccccgaagc
      181 cgccggcccg gacaatgtcg gccagccctt ccgcgatgat cgggaacgac aacgaagact
      241 tgggcaccaa ccggtccgct gcggtccggc cccggatctg ggcttccggc atgaagcggc
      301 ggtacttggc gtcatgcagc aagtcgtgcc ggggccggaa ccagtgcatc gagccctgaa
      361 cgtgccccgc gacgatcgcc gtgggtgaat agacggcgcg cgcttggccg aagaaggtgg
      421 ccacgtcacg gtagatgggc agattggcga tgaggtgttc ccagccggtc tgaccgtcca
      481 tcaccacacc cacgtcgaag tagagcgggc cgccctcact ggtcaaggtg atgccgcgct
      541 cccgcgctgc ggcgagcagc agctggtgct ggaaccgtcc ggtctggcgg taattcttga
      601 cgctgatcgc gccccagtcg gcccgccggt tgatctcccg gttggcgtct tcctgggtcc
      661 ggatgatctt ctcgtcgccc catgccactc ccggatggat cagcagctcc gcgacgctga
      721 aggttctcgg acctgccaga gtgcctgcgt cgatcagctc ggcgagggga aacgcttcct
      781 tcgagtcggc cgccggatcg aggatggtgg tcaccccata ggcgaggtcg atccgggaca
      841 tccagcggtc tgccgttacg acccctgccg cgacgtcggt gtggtgcgcg tgaaggtcga
      901 cgagacccgg catgacgacc ttgccggtca gatccatcac ccgatcggcc ccgctcggat
      961 cgcactcgcc gacgcaggtg atccgggctc cccgcaccag caccgtcccg cgctcaatca
     1021 cctggttgct gtcgacggtg atgatcttca cattggtgag cgccagggtc cccgccggtg
     1081 tcggacgcgg aatgcggaga tcgatgtcga cggtcgtggt gttgccgctg cgcacgtcgt
     1141 aagtgacgta acgcggaccg gaggcgaact gcagcgtcgt gctgtcgcgc caggaatgga
     1201 atatgccgcc acgcggatcg atgaagcgcc ggcccggcac cgaatcgttc tgatccgggt
     1261 tgatcgccgg aaggccaccg tcgctggcca cgggcgagat atagaggaaa cgcgcgctct
     1321 gaaaggcgac ccactgaccc ccgggcgaga gcatcggctc gttgccggct cgccatcggg
     1381 ccggaaactc gacgtgctcc gtcggcggtc cgccggtggg tgcgaccgag cgaaccttga
     1441 tggtgagcgc caacgccgaa tcggtgggga aggggtaata gaggagaccg gtggtgcggt
     1501 cggtccgatc ctgatactgg aagtacaccc ggctatcgag tccgacatac accggcaccg
     1561 gcccattggt gaccgcgagc tgcgtcgcac tcccgccggc aaccgggatg ctcacgacgt
     1621 tccatccctc ccgccgggac cagccgttcc cctccggggc ccgattgacg aagagtgtgc
     1681 cgccatcagg agaccagatc ggatggagat actctcccgg ttcgcgggtc acctgccgtg
     1741 gtgtgccttg cctggaggga acaatccaca catgaccccg ttccttgctg ttccaggtcg
     1801 caaaggccat ggactgtccg tcgggagacc aggatggggt cagctgaacg gtcccgtcca
     1861 tcggggtcgt caggggtgag ggcgtgccac cgggaagatc catcacccac accttcccca
     1921 cggccacgaa ggccaggcgc gatccatcgg gagccgcggc tggccattgg atggagcgca
     1981 cctgaaaggc cgaatcatcg atcgccaccc ggctccgaac cacctgagag atctcgcggt
     2041 gcacgtgcgc ggtgaagggg atgtctgtca ccgcgccgct ggtgacatcg actcgtttga
     2101 gcttgccgcc ctcccacgcg atcactgcgc cgccatcggg cgtccaggca aagcggggaa
     2161 agctgccgta accgtactgg gcgttgacct gggtgaggtc cttggccgcc ggcgccagga
     2221 tcatgcgttc ggtgccggtg gccaggtcgc ggaccaccag cccggtgctg ggtgcgtact
     2281 cgtggccccg ataggtgaag accgtatccc ggcgttcgag cgcgaagccg atccggctgc
     2341 cgtccggtga cggcgccggg gccagcgcgg ccggagggtc gatcgcgttg tcggccgccc
     2401 atccggttcg gcgcaacgcc tcggcgtact cggggctcaa ggcggccggc tcgctcgagc
     2461 gcacgttctc gaccgtgccc gtcgccagct ccagccgctg aatccggtgt ccggcgaaca
     2521 gcatgccgag cccttcgccg gtggaatagg aaacctggaa gtagaggtac ttgccgtcgg
     2581 gcgagtagcg gggcgcgtcg tattgggtca gacgatcggc cagcaggcgc ctgggctcgg
     2641 cgccgtcgag cggcaattcc cagatctcgg ccacttgccg gtgccagccg cggccgggcg
     2701 tgggatatac ccgcaccgcg gccaggcgcg atccgtcagg ggcccaggcc ggtgccatga
     2761 accgggtctc ccggtcgagg aagaccggcc gcggatcacc tccgtcggat ctcatgaccc
     2821 agacgttgtt ttgtccctgg cggtcggaga tgaaggcgat tcggtcgcca tcgggtgcga
     2881 aggccgggtg gaagttgagg gccatcccgc tgttctgcgt cagcgcttcg gcctcaccgc
     2941 cagcaatcgg caggcgatag atgtgcgcca acagatcaaa ggcgatccag cggccgtcgg
     3001 gagacacgtc gagcgagagc caggtgcctt cgtcggtggt gaagtcgatg atccg
//
LOCUS       DASWKS010000228         3764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1973783, whole genome shotgun sequence.
ACCESSION   DASWKS010000228 DASWKS010000000
VERSION     DASWKS010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1973783"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1032)
                     /locus_tag="VGA78_06735"
     CDS             complement(139..1032)
                     /locus_tag="VGA78_06735"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HEX9893601.1"
                     /translation="MRWFGLTVIAGLVAATPMQGQGGFKVYISVDMEGIAGVVTAEQL
                     GPTGFEYQRFREFMTAEALAAVEAAKEAGATEIVISDSHGNGQNLLIERFPSDVTIIR
                     AWPRPLGMMEGIDSSFAAAIFIGYHSGTSNPAGVRAHTFSSANYAGFKANGKELSEGG
                     WNAMIAGQFGVPVVLISGDESALADLRAVVPDVEAAVVKHSISFHSAATATPQSAQAL
                     IRLKVKRALGRRQTIKPVPRAQPVTVDLTFKSYLPSVLLSYLPLFSRVGSHAIRFQAK
                     DMVEASRIMQFVASYESGLTP"
     gene            complement(1080..1253)
                     /locus_tag="VGA78_06740"
     CDS             complement(1080..1253)
                     /locus_tag="VGA78_06740"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9893602.1"
                     /translation="MLIQHGTKDRNAVLGNTLQLVRKLVDAGKPVEMMVYPEGWERSL
                     TMIWGVGNPGRSD"
     gene            complement(1272..2435)
                     /gene="solA"
                     /locus_tag="VGA78_06745"
     CDS             complement(1272..2435)
                     /gene="solA"
                     /locus_tag="VGA78_06745"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEX9893603.1"
                     /translation="MERYDAAVVGLGSMGSMAAWMLAQRGRRVIGFDRFRPPHAMGSH
                     AGLSRVIREAYFEQPYYVPIVQRAYQLWSELEQISGSTIHQRTGGLMIGEPSGALVAG
                     AHRSAREHGIPCELLSAEQIRIRFPQFQVPEHHAGLFEHRAGTLVPERGVASALQAAQ
                     RAGAELRFDEPVLDWTPAGAAVTLRTPNGAFEADHVILAGGSWMATGLARIATPLAVA
                     RQVLFWFEPKAGRPAFAPSRFPIFIWQWTEGHSIYGFPDQGEGFKVAIHHEGPTVDPD
                     RVDRTVHLGEERELVGILERLLPGGVGPVLRSSVCLYTNTQDEDFILDYHPDDRRVIV
                     ASPCSGHGFKFAPAVGEILADLVTTGTSRFDLTPFRADRPGAFGPRRYTGAHG"
     gene            complement(2435..3520)
                     /locus_tag="VGA78_06750"
     CDS             complement(2435..3520)
                     /locus_tag="VGA78_06750"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HEX9893604.1"
                     /translation="MQRREWVKTAAAGALGALHLPPGAAGPEGPQSEDVIVVEGLVAG
                     TLRLSHLRGQQQGGVHAGVASCPGDFGSYARELKFFDRYRTEVIPARSVADIRQARRD
                     GRVAHIYGWQSAETLGSQFNGTMGNTDTALRAYREIGLRICGICYNVANLFGGGCLEP
                     HLPLTRAGRRLVEEIHGLGIVLDVGGHTGQQTSLDAIALSSGVPVICSHTNVAAIADN
                     PRCISDRLIRAIAGTGGVVGLTAVNDFHVRSRKDAAVPQSPRVTVEAYLDQFDHIKRL
                     VGVDHVGLGPDFVDGMPLDYNAVNREIITRDMISDGPWRYVQGFESIAELPNVMQGLR
                     RRGWSEVEVRKAMGGNWLRVYQRVWKA"
     gene            complement(3545..>3764)
                     /locus_tag="VGA78_06755"
     CDS             complement(3545..>3764)
                     /locus_tag="VGA78_06755"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9893605.1"
                     /translation="DGIEWVGMRPLTPDGLPLLGRLPGFENHYIATGHAMLGVTLAPA
                     TAEAMAELMTGIGPAPELAAFDPGRFRW"
BASE COUNT          622 a         1320 c         1220 g          602 t
ORIGIN      
        1 cccgggtgcg cagtccgcgc cgccgacagt gcttcggccg agagatccgc cacgtgaacc
       61 gaggcagcgt cggccagaaa gcgagcggcg atcgcgaggc cgatgcccga tccgccgccg
      121 gtaacgagga cccgcacgtc agggtgtcag gccggattcg taggacgcga cgaactgcat
      181 gatccggctg gcttccacca tgtccttggc ctggaaacgt atcgcgtgcg accccacccg
      241 gctgaacagc ggcaggtacg agagcagcac cgaaggcagg tagctcttga aggtgaggtc
      301 aaccgtcacc ggctgggccc gcggtaccgg cttgatggtc tgtcgccgtc ccaatgcccg
      361 cttcaccttg agccggatga gcgcctgggc cgactggggt gtggcggtcg cggcggagtg
      421 aaagctgatg gaatgcttca ccaccgcggc ttcgacatcg gggaccaccg cccggagatc
      481 ggccagcgcc gattcatccc cagaaatcag caccaccggc acgccgaact gcccggcgat
      541 catcgcgttc cagccgcctt ccgagagctc cttgccgttg gccttgaagc cggcgtagtt
      601 ggcgctggag aaggtgtggg cccggacccc ggctggatta ctggtgccgc tgtgatagcc
      661 gatgaaaatg gcggccgcga aactggagtc gatgccttcc atcatcccga gcggccgggg
      721 ccaggcgcga atgatggtga cgtcggaggg gaagcgctcg atcagcaggt tctggccgtt
      781 gccatgcgaa tcgctgatca cgatctcggt ggcgccggct tccttcgcgg cttcgaccgc
      841 cgcgagcgcc tccgcggtca tgaactcccg gaagcgctgg tactcgaagc cggtgggacc
      901 gagctgctcg gcagtgacga cgccggcgat gccctccata tcgaccgaga tgtagacctt
      961 gaagccgccc tggccctgca tcggcgtcgc ggccaccaat ccagctatca ctgtcagacc
     1021 gaaccatcgc atgccgccac tcctggttgt cgtttcgttt tctgtcgcag tggccccgat
     1081 cagtcggagc ggcccggatt cccgactccc catatcatgg tcaggctcct ttcccagccc
     1141 tcggggtaca ccatcatctc caccggcttc cccgcgtcca ccagcttgcg caccagctgc
     1201 agcgtattgc ccaggaccgc attgcggtcc ttggtgccat gctggatcag caggcagcgt
     1261 ccgggtgaag gtcatccatg cgccccggtg tagcggcggg gaccgaacgc accgggccga
     1321 tcggcgcgga atggagtcag atcgaagcga ctggttccgg tggtcaccag gtcggccagg
     1381 atctcaccca ccgcaggggc aaacttgaac ccatgcccgg agcacggact cgccacgatc
     1441 acgcggcggt catcggggtg atagtccaga atgaagtcct cgtcctgggt gttggtgtag
     1501 agacacacgc tgctgcggag aaccggcccc accccgcccg ggagcaatcg ctccagaatc
     1561 ccgaccagct cgcgctcttc gccgaggtgg accgtccggt cgacccggtc gggatcgacg
     1621 gtcggcccct catggtggat cgccaccttg aatccctcgc cctggtccgg aaagccgtag
     1681 atggagtgtc cctcggtcca ctgccagatg aaaatcggaa accggctcgg tgcgaacgcc
     1741 ggccgcccgg ccttgggctc gaaccagaac aacacttgtc gggcaacagc gagaggggta
     1801 gcgatgcggg ccaggccggt ggccatccac gaaccgcccg ccaggatcac atggtccgcc
     1861 tcgaaagcgc cgttcggcgt ccgcaatgtg accgccgccc ctgccggagt ccaatccagc
     1921 accggctcgt cgaaccggag ctcggctccg gcgcgttggg ccgcttgcaa cgccgaggcg
     1981 accccacgct cgggtaccag ggttccggcc cggtgctcga agaggccggc atgatgctcg
     2041 ggcacctgaa actgggggaa ccggattcgg atctgctccg cgctgagcaa ctcgcagggg
     2101 atcccgtgct cccgggcact tcgatgcgct ccggccacca gggcgcctga gggctcgccg
     2161 atcatgaggc cgccggtgcg ctggtggatc gtgctccccg agatctgctc cagttcggac
     2221 cagagctggt aggcccgctg cacgatcggg acgtaatagg gttgctcgaa gtacgcttcc
     2281 cgaatgaccc gggagagtcc ggcgtgagag cccatcgcgt gaggcggccg gaaccgatcg
     2341 aacccgatga cccgccgtcc ccgctgggcc agcatccacg cggccatact gcccatgctc
     2401 cccaggccga caacggccgc gtcgtatcgc tccatcacgc cttccagacc cgttgataga
     2461 cccggagcca gttcccgccc atcgctttcc gcacctcgac ttcgctccag ccgcgccgcc
     2521 gcaggccctg catcacgttg ggcagctccg cgatactctc gaagccctgg acgtagcgcc
     2581 aggggccatc gctgatcatg tcgcgggtga tgatctcacg attcacggcg ttgtagtcga
     2641 gcggcatccc gtccacgaag tccggcccca acccgacgtg atccacgccg accagccgct
     2701 tgatgtgatc gaactggtcg agataggcct cgaccgtgac ccgggggctc tgcgggacgg
     2761 cggcgtcctt ccgcgaacgg acgtggaaat cgttgacggc ggtgaggccg accacacccc
     2821 cggtccccgc gatagcccgg atcaaccggt cactgatgca ccggggattg tccgcgatgg
     2881 cggcgacgtt ggtgtggctg cagatgaccg gcacgccgct cgacagggcg atggcgtcga
     2941 gactggtctg ctggccggtg tggcctccca cgtccagcac gatgccgagc ccgtggatct
     3001 cctccaccag ccgacggccc gcccgagtga gcggcaaatg aggttccagg cagccgccgc
     3061 cgaacaggtt ggccacattg tagcagattc cgcagatgcg aagcccgatc tcgcggtagg
     3121 cccgcagcgc ggtgtcggtg ttccccatcg tcccgttgaa ctggctgcct aacgtctcgg
     3181 cggactgcca gccgtagatg tgcgccaccc gcccatcccg ccgggcctgg cggatgtcgg
     3241 ccacggaccg ggccggaatc acctcggtcc ggtagcggtc gaagaacttg agctcccggg
     3301 cgtaggagcc gaagtccccc gggcagctgg ccacgccggc gtgcactcca ccctgctgtt
     3361 gcccccgcag atgcgacagc cgcaaggttc ccgcgaccag gccttccacc acgatcacgt
     3421 cctcgctctg cggtccctcc gggccggccg ctccaggcgg caggtgcagg gcgccgagcg
     3481 cgcccgccgc cgcggtcttg acccattcac gacgctgcat gggttcgcct cccctggtgg
     3541 cttgctacca tcggaaccgg cccggatcga acgccgccaa ctcgggcgcc gggccgatgc
     3601 cggtcatgag ctccgccatc gcttcggccg ttgccggtgc cagggtcacg cccagcatgg
     3661 cgtgccccgt ggcgatgtag tggttctcga acccgggaag ccggcccagc aggggcagcc
     3721 catcgggcgt gagcggccgc atgccgaccc actcgatccc atcg
//
LOCUS       DASWKS010000229         3351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1973994, whole genome shotgun sequence.
ACCESSION   DASWKS010000229 DASWKS010000000
VERSION     DASWKS010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1973994"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VGA78_06760"
     CDS             <1..291
                     /locus_tag="VGA78_06760"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9893606.1"
                     /translation="TRCPVHGKECHVGLFARSLFVGQRIPLAGVAHQNGTIRFGDDPA
                     TSALDRNCRAHELDNLYVVDGSFFPSSSAVNPALTIMANALRVGDHLLGRLG"
     gene            288..1322
                     /locus_tag="VGA78_06765"
     CDS             288..1322
                     /locus_tag="VGA78_06765"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893607.1"
                     /translation="MTARFRPGLGCVLLPILALVLAVPAGGQLVSGVGPIGMSVSDLD
                     RSIAFYTGVLSFQVVADTEVVGSPYERLTGVFGARIRVARLRLGREEIELTQYLAPEG
                     RPAPADTRSNDRWFQHIAIVVSDMDSAYRMLRRARVRHASTGPQLLPAWNPAAGGIRA
                     FYFKDPDGHHLELIRFPRGKGDPRWQSDAAGAGQRGLFLGIDHTAIVVGDTERSLGFY
                     RDRLGLTVAGESRNHGTEQEHLNIVEGARLRITSLRAGSGPGIEFLEYLEPRDGRSFP
                     TDARPNDLIHWHTTLVVAPSSAAMHQLADSAPARFSRGVADLPDRALGFSRGVMLRDP
                     DGHALLVVDP"
     gene            1338..1766
                     /locus_tag="VGA78_06770"
     CDS             1338..1766
                     /locus_tag="VGA78_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9893608.1"
                     /translation="MATAFRLIGSHDIDQILQALRDGHAETGEPFAADRASAWLYSLL
                     EDPETAPLWLIERNGAFAGFAMLHLAPDLSPRRAYVTGLYINPGLRGTGLGPTALSLL
                     RDVARASGWKLMEHDVALEAKVPRVRPMPLLVGAARGSAA"
     gene            1775..3013
                     /locus_tag="VGA78_06775"
     CDS             1775..3013
                     /locus_tag="VGA78_06775"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9893609.1"
                     /translation="MFGWEFPPFQAGGLATATVGLVKGLLRNGVGVTLVVPFPVDRSP
                     LPELRLLGAPPEGAEELRVHRIPSPLLPYGGAGLYTEVLARARPSPGVRQVYGPDLFA
                     EVGRFTELARRIAATEPHDVIDAHDWIAFGAGLAARAASGRPLLTHIHATEFDRTGGP
                     GNPEIARREREGLTLADRIISNSQRLKDQCVERYGIRTDRVDVVHWGVDGERSDRGPL
                     PPAPFPAGTPVVLFLGRVTQQKGPDYFMEMAGRVARYVPRVKFVLAGNGDMLPGLMQR
                     AAELGIADRVIFAGGLHGADVDRAYRMATVCVMPSRSEPFGLVALESLQQGTPIIMPR
                     QAGAAEVVRHAFKVDYWDIDEMTNKVVAILRHDTLRQELAEGGRRELELPRFGLDEPA
                     RRTAESYARALHQAREDSAA"
     gene            3010..>3351
                     /locus_tag="VGA78_06780"
     CDS             3010..>3351
                     /locus_tag="VGA78_06780"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893610.1"
                     /translation="MKEICLYAQVHQPYRLGPYRLFDVGTDTECFNHNENARILRRVA
                     AQCYLPANRLLARLIRETGGRFRMALSLSGVLLEQLATWAPEALESFQELVDGGGVEL
                     LGETYYHSLSGL"
BASE COUNT          492 a         1132 c         1172 g          555 t
ORIGIN      
        1 acccggtgtc cggtgcacgg caaggagtgc cacgtggggc tgttcgcccg ctcgctcttc
       61 gtggggcagc ggattccgct ggccggggtg gcccaccaga acggtaccat ccgattcggc
      121 gacgatcctg ccaccagcgc gctcgaccgc aactgccggg cccatgagct ggacaacctc
      181 tacgtggtcg acggcagctt cttcccgtcg agctcggcgg tgaaccccgc cctgaccatc
      241 atggcgaacg cgctcagggt gggcgaccac ctgctggggc ggctgggatg acggcccgtt
      301 tccgcccggg gctcggctgc gtcctcctgc cgatcctcgc cctggtcctg gcggttccgg
      361 ccggcgggca gctggtcagc ggggtcgggc ccatcgggat gtcagtctcg gatctcgatc
      421 ggtcgatcgc attctacacc ggggtgctga gcttccaggt cgtcgccgac accgaagtgg
      481 tgggctcgcc ctacgagcgg ctcaccggcg tcttcggggc ccggatacgg gtggcacggc
      541 tccggctggg gcgggaggag atcgagctga ctcagtatct cgcccccgag gggcgtcccg
      601 ccccggccga tacccggagc aacgatcgct ggttccagca catcgccatt gtggtcagcg
      661 acatggatag cgcctatcga atgctccggc gagccagggt gcgtcacgcc tcgaccgggc
      721 ctcaactgct ccccgcctgg aacccggccg ccggcggaat ccgggcgttc tacttcaagg
      781 atcccgacgg ccaccatctg gagctgatcc ggtttcctcg cggcaaaggc gatccccgct
      841 ggcagtccga cgctgccgga gccgggcagc gcgggctgtt cctcggcatc gatcacaccg
      901 ccatcgtggt gggggatacc gagcggagtc ttggattcta ccgggaccgg ctcgggttga
      961 ccgtcgcggg ggagagccgc aaccacggca ccgagcagga gcacctgaac atcgtcgaag
     1021 gggcgaggct ccggatcacc agcctgcggg ccggctccgg acccggcatc gagtttctcg
     1081 agtacctgga gccccgcgac ggccgttcct ttccgaccga cgcaaggcct aacgacctga
     1141 ttcactggca caccacgctg gtcgtcgcgc cgagctcggc ggcgatgcac cagctggccg
     1201 actcggcccc cgcgcgattt tctcgcgggg ttgcggacct ccccgaccgg gcgctcgggt
     1261 tctcgcgcgg ggtgatgctg cgtgatcccg acggccacgc gctcctggtc gtcgatccct
     1321 gaatcggagg agaagcgatg gccaccgctt ttcgcttgat aggctcccac gacatcgacc
     1381 agatcctcca agcgctccgg gacggccatg ccgagactgg tgagccgttt gcggccgacc
     1441 gggccagcgc ctggctctat tccctgctcg aggaccccga gaccgcgccg ctctggctga
     1501 tcgagcgtaa cggcgctttc gccggatttg ccatgctcca cctcgcgccg gacctgagcc
     1561 cccggcgggc ttatgtgacc gggctctaca tcaatccggg actccgtggg actggactcg
     1621 ggccgaccgc gctcagcctg ctgcgtgatg tggcccgagc ctcgggctgg aagctgatgg
     1681 agcacgacgt ggcgttggag gccaaggtgc ctcgggtgcg gccgatgccc ctgctggtcg
     1741 gagccgcgcg agggtcggcg gcgtgagggt actgatgttc ggctgggaat tccctccgtt
     1801 ccaggccggc gggctggcca ccgccacggt gggactggtg aaggggcttc tccgcaacgg
     1861 ggtaggcgtg accctggtag tcccttttcc agtcgaccgg agtcccttgc cggaactccg
     1921 cctgctcggc gccccacccg agggcgctga agagctccga gttcaccgga tcccgtcgcc
     1981 gcttctgccc tacggcggag ccggactcta caccgaggtt ctggcccggg ctcgcccgtc
     2041 cccgggagtc cggcaggtat acggaccgga cctgtttgcc gaagtcgggc gattcaccga
     2101 gctggcccgc cgcattgcgg cgaccgagcc ccacgatgtg atcgacgccc atgattggat
     2161 cgcgttcggc gccggcctgg ccgctcgggc ggcctccggg cggccgctcc tgacccacat
     2221 tcacgccacc gagttcgacc gaaccggtgg cccgggcaat cccgagatcg cgcgacgtga
     2281 acgggaagga ctgacgctgg cggatcggat catcagcaac agccagcgcc tcaaggacca
     2341 gtgtgtcgaa cgctacggca tccgcaccga ccgggtcgac gtggtgcatt ggggagtcga
     2401 cggggagcgg tccgaccgag ggccgctgcc gcccgcaccg ttcccggccg gcacgccggt
     2461 ggtgctcttt ctgggccggg tgacccagca gaagggtccc gactatttca tggagatggc
     2521 gggacgagtc gcccgctacg taccgcgggt caagttcgtg ctcgccggca acggcgacat
     2581 gctccccggc ctgatgcaac gggccgccga gctgggtatc gccgatcggg tgatctttgc
     2641 gggcgggctg cacggggccg acgtcgatcg ggcctaccgg atggcgacgg tgtgtgtgat
     2701 gccctcccgg agcgagccgt tcggcctggt agccttggag agcctgcagc aggggacgcc
     2761 gatcatcatg ccgcgtcagg cgggcgccgc ggaagtcgtg cggcacgctt tcaaggtcga
     2821 ttactgggat atcgacgaga tgaccaataa ggtggtggcc atcctgcgcc acgacaccct
     2881 gcggcaggaa ctggccgagg gcgggcggcg cgagctggag ctgcctcgtt ttggactgga
     2941 cgaaccggcc cggcgtacgg cggagagcta cgcccgggcg ctgcaccagg ccagggagga
     3001 ctcggcggca tgaaggagat ctgtctctat gcccaggtgc accagcctta tcgcctgggg
     3061 ccgtaccggc tgtttgatgt ggggaccgac acggagtgct ttaaccacaa cgagaatgcc
     3121 cgcatcctcc ggcgggtcgc ggcccagtgc tacctgccgg ccaatcgcct gctcgcccgg
     3181 ctgatccgtg agaccggagg caggtttcgg atggcgctca gcctgagcgg ggtgctgctc
     3241 gagcaactgg ccacctgggc acctgaggcc ctggagagtt ttcaggagct ggtggacggc
     3301 ggcggagtcg agctgctcgg ggagacgtac taccactcgc tgtccggcct g
//
LOCUS       DASWKS010000230         3273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2344317, whole genome shotgun sequence.
ACCESSION   DASWKS010000230 DASWKS010000000
VERSION     DASWKS010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2344317"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..922
                     /locus_tag="VGA78_06785"
     CDS             <1..922
                     /locus_tag="VGA78_06785"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893611.1"
                     /translation="SYTDLMETGELIGPRLYSTGPGVFSSDNIRSLEDARDVLRRYAD
                     HFNTQTIKQYLAGDRKVRQWVIMAARELGLTTTTEGGSNFTMNLTLMQDGYPGLEHSL
                     PISPFYQDVVELEKFSGLTYTPTLIVSYGGPAGLGDFLTRPANVDQEQRLRFFTPHDE
                     LDKWKSTQFNRKDQFVYPQHAQQLTKLVEAGGRVGLGSHGEVQGLGVHWELWMIGSGG
                     MKPHDALRAATLHGADAIGLARDIGSLEPGKLADLQVLDLNPLEKLEHSTSIRYVMKN
                     GRLYEAETLKEIWPRERALATQWWWRVEPR"
     gene            complement(1048..>3273)
                     /locus_tag="VGA78_06790"
     CDS             complement(1048..>3273)
                     /locus_tag="VGA78_06790"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893612.1"
                     /translation="VISEHSSVLTGAGDPERLEGADVSADFFGLLGVKPVLGRLVFSS
                     EEAAWQGAKAVILNETLWRTRFGADPAVVGSMISLDDERFQVVGVAPAGSAWPPRTMI
                     WYPFTFDPERLASSRGAVYLNTLARLRPGATLASADDDMGVIAARLEREYPEMNADLG
                     ATVVPLHQWLIGSLDRPLYILLGGVGFVLLIACSNVANLLLVRGVSREGELAVRTALG
                     AGRGRLVRQLVTESLVLSLLGAAAGLALAAVGLRLLLRAAPASIPRLGDIHLDGLVLG
                     FTLLVALVTGVLFGVVPARLVLRPDLGRTIREGGRGGTSRAGSNRARRTLVLVQVALS
                     VMLLAGAGLLIRSFTGLMRVDPGFRTDGSVSFTLSLPSTKYPSGEAQVVFVRALMERI
                     QAIPGVHSAGAGFGMPLTGFSFNWSLEIAGRPAQSPADQLSAEVRVATPDYFPTMGIP
                     ILRGRGLTAADRAGAPGALVLTETTARRLFPGEDPIGQHVRFSWGRRGNQLEGDIVGV
                     VGDIKQVSLAAGSLPQFWAAYDQWPVGSVDVVIHSSRDLESLMVDARRVVHELDQHLA
                     VSQVRTLNHIVAESVAQPRFYMVLLTAFALVAVGLCGIGIYGVIAYLVGQRSREIGIR
                     LALGVARSGDAHGGAGRNRAGGAGCRLGCGRRARADPADGWVAVRGDRGRPGHLHRSY
                     PDPRVRGSGGVRGSRLSRGEGRSGAHDAGRIRAFRFLDVGHPQMPQIAQIQPQIVLML
                     R"
BASE COUNT          626 a         1132 c         1063 g          452 t
ORIGIN      
        1 ctcctacacc gatctgatgg agacgggcga gttgatcggc ccgcggctct actccaccgg
       61 cccgggcgtg ttctcctccg acaatatccg cagtctcgag gatgcgcggg acgtcctgcg
      121 gcggtacgcc gatcatttca acacccagac catcaagcag tacctggcgg gagaccggaa
      181 ggtccgccag tgggtgatca tggccgcgcg cgagctcgga ctgaccacga ccaccgaggg
      241 cggcagcaac ttcaccatga atctgacgct gatgcaggac gggtatcccg ggttggagca
      301 ttcgctcccg atcagcccgt tctaccagga cgtggtggag ctggagaagt tcagcggcct
      361 cacgtacacg ccgacgctca tcgtcagcta cggcgggccg gccgggctgg gcgacttcct
      421 cacccggccg gcgaatgtgg accaggaaca gcggctccgg tttttcacgc cccacgatga
      481 gctcgacaag tggaagagca cccagttcaa ccggaaggac caattcgtct atccgcagca
      541 tgcccagcag ctcaccaagc tggtcgaggc cggcgggcgg gtcggcctcg gctcgcatgg
      601 agaggtccag ggcctcggcg tccattggga gctctggatg atcgggagcg gcggaatgaa
      661 gccgcatgac gcattgcgag cagccacgct gcacggtgcc gatgccatcg gtctggcccg
      721 ggacatcggc tccctcgagc cgggcaagct ggccgacctc caggtgctcg acctgaatcc
      781 gctcgagaag ctggagcact cgacctcgat ccgctatgtc atgaagaacg ggagactcta
      841 cgaagcggag acgctgaagg agatctggcc ccgggagcgg gccctggcca cccagtggtg
      901 gtggcgggtg gagccgcgct gaagccttat cgtgactggt tgttcgggcg ggtctacgtg
      961 gtagcggggt tcgaatcctc gatcgaaaag ctatccgcag ataacgcaga ttgcgcagat
     1021 actgcaccaa gcaaatgcca accatgccta acgtagcatt aaaacaattt gtggttgtat
     1081 ctgcgcaatc tgcggcatct gcggatgacc aacgtcaagg aatcggaacg cccttattcg
     1141 gcccgcatcg tgagcgccgg atcgaccttc gccgcgcgaa aggcgggaac cccgcacgcc
     1201 accagagcca cgcacgcgag gatcagggta actgcgatgt aggtggccgg gtcggccgcg
     1261 gtcaccccga acagcaaccc acccatcagc cgggtcagcc cgagcgcgcc ggccacaccc
     1321 aaggcgacac ccagcgccgc cagcacggtt ccttcctgca ccaccatgcg catcacccga
     1381 ccgcgcgacg cccagggcca gccggatccc gatctcgcgg gagcgctggc ccaccaggta
     1441 cgcgatcact ccatagatgc cgatgccgca tagaccgacg gctaccaggg cgaacgcggt
     1501 gagcaggacc atatagaagc ggggctgggc caccgactcg gccacgatgt ggttcagggt
     1561 tctcacctgg gagaccgcca ggtgctggtc gagctcgtgc accacccgcc gcgcgtcgac
     1621 catgagcgat tcgaggtcgc ggctcgagtg aatgaccaca tcgaccgatc caaccggcca
     1681 ctgatcgtac gccgcccaga actgaggtag cgagccggcg gcgagcgaga cctgcttgat
     1741 gtcgcccacc acgcccacga tgtccccctc cagctggttg ccgcgccgcc cccagctgaa
     1801 ccggacgtgc tggccgatgg gatcctcacc gggaaacaac cgccgcgccg tggtttcggt
     1861 caggaccagc gccccaggag ccccggcccg gtcggcggcg gtcaagccac gcccccggag
     1921 aatcgggatt cccatggtcg ggaagtagtc cggcgtcgcc acccgcacct ccgccgacag
     1981 ttgatcggcc gggctctgcg ccggccggcc ggcgatctcg agcgaccagt tgaacgagaa
     2041 accggtgagc ggcatcccga acccggctcc ggccgagtgg actccgggga tggcctggat
     2101 ccgttccatc aaggcgcgaa caaaaacgac ctgtgcctct cccgacgggt acttggtgga
     2161 gggcaggctc aatgtgaaac tcaccgaccc gtcggttcgg aagccggggt ccacccgcat
     2221 gagtccggta aagctccgga tcaggagccc ggcgccggcc agcagcatca ccgacagggc
     2281 gacctgcacc agcaccaggg tccgcctggc ccggttgctg ccggcccgtg aggttccgcc
     2341 ccgcccgcct tcgcgaatgg tccggcccaa gtccggccgc agcaccagcc gggcggggac
     2401 caccccgaac agcactccgg tcaccagcgc caccagcagc gtgaacccga ggaccaaccc
     2461 gtcgagatgg atatcgccca gccggggaat gctggcgggc gccgccctca acagcagacg
     2521 gaggccgacg gcggcgagcg cgagtccggc cgcggcgcct aacaacgaca gcaccaggct
     2581 ctcggtgacg agttgccgaa ccagacggcc gcggccggca ccgagggcgg tgcgaaccgc
     2641 cagctcaccc tcccgggaca cgccccggac cagcagcagg ttggcgacgt tggagcacgc
     2701 gatcagcaga acgaatccca ccccacccag caggatatag agcggccgat ccagcgatcc
     2761 gatgagccac tggtgcagtg gaaccacggt ggcaccaagg tccgcattca tctcgggata
     2821 ctcgcgctcc agtcgggcgg cgatgacgcc catgtcgtcg tcggcgctgg cgagcgtggc
     2881 gccgggacga agccgcgcga gcgtattcag gtacacggcg ccccggctgc tggccaaccg
     2941 ctcgggatcg aaagtgaacg gataccagat catggtccgg ggcggccagg cggaacccgc
     3001 gggcgccaca ccgacgacct ggaagcgttc gtcatcgagc gagatcatgc tgccgaccac
     3061 cgccggatcg gcgccgaagc gcgtgcgcca gagggtctcg ttgaggatca cggccttggc
     3121 gccctgccag gcggcctcct ccgaactgaa gaccagccgc cccaggaccg gcttgacgcc
     3181 cagcaggccg aagaagtcgg cgctcacgtc ggcaccctcg agccgctccg ggtcgccggc
     3241 gccggtcaac acactgctgt gctcgctgat gac
//
LOCUS       DASWKS010000231         4405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_484133, whole genome shotgun sequence.
ACCESSION   DASWKS010000231 DASWKS010000000
VERSION     DASWKS010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484133"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..1394
                     /locus_tag="VGA78_06795"
     CDS             324..1394
                     /locus_tag="VGA78_06795"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX9893613.1"
                     /translation="MLDPQVRRIVAGILVAALGLVLVSALLPFAGGLLGGPMLYVLWE
                     PLQRRLVRLRVPAPLAAGVIILLTLILIVVPGIWLVTMLVDQAQSAAQSLLASPLLGR
                     LYDLHVGPVAVGPALVSAGQNLVTWLGSNALALLGTAARVVLNLVFAFFGLYFLLIRP
                     GRAWAVLEPYLPFSRSTSALLRDRFTAVTFSTVIGTGLIAAVQGTLIGLAFWVTGIPN
                     AVFWGAVTVVLAILPLVGSGMVWIPGAVGLFFSGEPAKAVGLILWGAIVVGNVDALLR
                     PMVYNRYAKIHPMITLVGAIVGVQQMGFVGLILGPLAISYFFELARLFTVEYGHAQEP
                     AALPPAGGTSAAPAVAEVVVGH"
     gene            complement(2082..3593)
                     /locus_tag="VGA78_06800"
     CDS             complement(2082..3593)
                     /locus_tag="VGA78_06800"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9893614.1"
                     /translation="MRRSVLALALSVLAASPVMAQRAGSWEVGGFARYNWYDGSFNVP
                     DASKEKNSFGGGIRLGWFFTQNWALELDGSFNATDIDGLPGGAQSVGLKYWPFHLRVI
                     YNAPLSESFSWLLGAGANYNRYELSSDADAFLTNRFEGSDFGVGGLTGFRYRFSELVS
                     LRIDGTLDYIPSPENESVNSNVMWGLQAGLSLHFGGQGNALDSIMVEPRNSTVLVGQQ
                     VTFRVTGYYADGTTRDVTASTTAVLAGGQATVAGMTFSSNTPGTYQVRFDNAAARRRR
                     TDVAVITVTPQPAPPADTLVRVDLQPDSATVFSNESLPLRVTGHYSVSQPRELTDCTL
                     TPDGGTVTGGAFTATRPGRYTITAVCERGKSDRAVVNVRSINITLRALFRFNRTNVYV
                     QEELDSLRVVAQQMSEHPTLQLTIYGHADQIGSDAYNCNLGWRRIQAVVDTLRSFGVP
                     DDRLRAAAKTSYGERQPVADNDTAEGRAQNRRVEVFDAGSARAYDTSKACGPR"
     gene            complement(3754..>4405)
                     /locus_tag="VGA78_06805"
     CDS             complement(3754..>4405)
                     /locus_tag="VGA78_06805"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9893615.1"
                     /translation="PDSATIYVGERVQLTVTGHYSNNTTRVLTDCQLTPDGGTVSEGR
                     FSADREGRYTVTANCPDGLSDRSTFTVIGFPAITLRALFRFDSTNVGDSLRAELDTLR
                     WLARTMAERPGLQLTIYGHADFIGTDEYNCNLGWWRIEAVVDTLRSFGASSGVLDALR
                     RQSFGERQPANPGRTDRARAENRRVEIFDTPTAERERRYDPSRACGPKTRDRERRP"
BASE COUNT          665 a         1442 c         1515 g          783 t
ORIGIN      
        1 ggtgtcgaga acagcttcgg ccggcgggcg catcagccgg acccggaccc gatccacggc
       61 aagatcgaac acgcccgagg ccagcgatgc cggaaacacc ggtcgcaggg cgagcgaagc
      121 ggatggtaaa ccgtcatgac cggtcgtgtc ggcgcaggcg gccatggccg caaccgcgcc
      181 ggccacgagc ggtgcgagcc ggcgtcgtgg ggcagggtgc tgcacgcagg aacctcccga
      241 acccctgaaa gctaggggat gacagggcgt cctggcaggg gatcgtccct ggcgggcctt
      301 ccgaggcgcc gctaccgttc cgcatgctcg accctcaggt ccgtcgcatc gtggccggca
      361 tcctggtcgc cgcgctcggg ctggtgctgg tctccgcctt gctgccgttc gccggcggcc
      421 tgctgggtgg gcctatgctg tatgtgctct gggagccgct gcagcgacgg ctggtgcggc
      481 tccgggtacc ggcgccgctc gccgccgggg tcatcatcct cctcacgctg attctcatcg
      541 tagtaccggg catctggctg gtcacgatgc tggtggacca ggcccagagc gcagcgcaaa
      601 gcctgctggc gagcccgctg ctcgggcggt tgtacgacct ccacgtcggt cccgtcgccg
      661 tgggtccggc gctggtgtcg gcgggccaga acctggtcac ctggctcggg agcaacgcgc
      721 tggccctcct cggcacggct gcgcgagtcg tgctgaacct ggtctttgcc ttcttcggcc
      781 tctacttcct gctgatccgc ccaggcaggg cgtgggccgt gctggagccg tatctcccgt
      841 tctcccgctc gacctcagcg ctgctccgcg accgcttcac ggccgtcact ttctcgacgg
      901 tgatcggcac cgggctcatc gcggcggtcc agggaaccct catcggcctc gccttctggg
      961 tcaccgggat ccccaacgcg gtcttctggg gtgcggtcac cgtcgtgctc gcgattcttc
     1021 ccttggtcgg gagcgggatg gtgtggatcc ccggcgctgt ggggctcttt ttcagcggcg
     1081 agccggccaa ggccgtcggg ctgatccttt ggggggcgat tgtggtcggc aacgtggacg
     1141 ccttgctccg gccgatggtg tacaacagat atgccaagat ccatcccatg atcaccctgg
     1201 tcggcgcgat cgtgggggtg cagcagatgg ggttcgtggg gttgatcctc gggccgctcg
     1261 ccatctccta cttcttcgag ctcgcccggc tgtttacggt ggaatacggt cacgcccaag
     1321 agcccgcggc cctgccgccg gcggggggaa cgtccgcggc gcccgcagtg gccgaggtcg
     1381 tcgttggtca ttagacgttg gacgttagac gttggacgtt ggacgttgga cgttggacgt
     1441 tggacgttag acgttggacg ttagtctttg gacgttagag aagagtcatt cgtcgggggt
     1501 cgttagtggt gcaaggacca aggaccagcg cccccccccc gcctttctgc acctgtgagc
     1561 ttcgatccga tgatgagcct cagtggcgct ggggtacact cagagcatgg cagacgtgcg
     1621 ccggttgcgg atcgctcagg aggcggagga ccttgccgtg gaggtgtacg aggccacggc
     1681 cgaagcaccg gctgtggaac gattcggcct cgtccttcag cttcggcggg cctccacctc
     1741 ggtcgggctc aatgtcgcag agggctgtgg ccgaggcggg gacggcgact tccttcgctc
     1801 tttgcgcatt gcacgtggct ccctcgtaga gctcgcattc ggaatccgaa tagcccatcg
     1861 agtggacctg cttgacgcgg aacggttggg gcggttggcg cctcgcctgg atcgggtggg
     1921 ccgaagcctc accaagctaa gtcagtacct cgagaagccc cgtggcgggg gaacgaagag
     1981 ggggcggccg aagccacccc cggagggtcg ttagtcgttg gtcgccagac gttagtcttc
     2041 gtcaaagacc aacgtccaac gaccaacgtc caacgaccaa gttaccgcgg cccgcaggcc
     2101 ttgctggtgt cgtacgccct cgcgctgccc gcgtcgaaga cctccacccg gcggttctgc
     2161 gcccggccct cggcggtgtc attgtccgcg accggttggc gctcgccgta gctggtcttg
     2221 gcagccgccc ggaggcggtc atccggcacg ccgaacgagc ggagcgtgtc caccacggcc
     2281 tgaatccgcc gccagccgag gttgcagttg tacgcgtcgc tcccgatctg gtccgcgtgg
     2341 ccgtagatgg tgagctgcag cgtaggatgc tcgctcatct gctgcgccac cacgcggagc
     2401 gaatccagct cctcctggac atacacgttg gtccggttga accggaacag cgcccgcagc
     2461 gtgatattga tggaccggac attgacgacg gcgcgatcgc tcttaccgcg ctcgcatact
     2521 gcggtgatgg tgtaccgtcc cggccgggtc gcggtgaacg cgccccccgt aacggtgccg
     2581 ccgtccggag tcagagtgca gtcggtcagc tcccggggct ggctcacgct gtaatgaccc
     2641 gtcacccgga gcggaagcga ctcattcgag aataccgtcg cggagtcggg ttgcaggtcc
     2701 acccgcacca gggtgtccgc cggcggcgcc ggctgcggag tcacggtaat gacggctacg
     2761 tcggtcctcc gccggcgcgc cgcggcgttg tcgaaccgga cctggtaggt gcccggggta
     2821 ttgctggaga acgtcatgcc ggcgacggtc gcctggccac cggccaacac cgcggtagtg
     2881 ctggccgtga cgtcccgcgt ggtgccgtcg gcatagtagc cggtcacccg gaaggtcacc
     2941 tgctggccca ccaggacggt gctgttccgc ggctcgacca tgatcgaatc gagcgcgttg
     3001 ccctgcccgc cgaagtggag gctcaagccc gcctggaggc cccacatcac gttggaattg
     3061 acggattcat tctcgggcga ggggatgtag tcgagcgtcc catcgattcg gagcgagacc
     3121 agctcggaga accggtaacg gaacccggtc aggcccccga cgccaaagtc gctgccctcg
     3181 aatcggttcg tcaggaaggc atccgcgtcg gatgacaact cgtagcggtt gtagttggcg
     3241 ccggcgccca acagccagga aaagctctcg ctgagaggag cgttgtagat cacccggagg
     3301 tggaagggcc agtacttgag gccgacgctc tgggcgccgc cggggaggcc gtcgatgtcg
     3361 gtggcgttga acgacccatc cagctccaga gcccagttct gggtgaagaa ccatccgagc
     3421 cggatgcccc cgccgaagct gttcttctcc ttggacgcat cggggacgtt gaagctgccg
     3481 tcgtaccagt tgtagcgagc gaacccgccg acttcccagg agcccgcacg ctgggccatg
     3541 accggactgg ccgcgaggac gctcagcgcg agggcgagga cggacctacg catggatgcg
     3601 ctcccaggtg cagggggaaa cggtatcccg gcccagcggc cgggggcggc atagcggttg
     3661 ccttgtcgcg cgaggacctg caacggcgcc ggtcgtacgg cgccgttgcg gtctccgctc
     3721 agtgttctcc cagcgtcctg tacaccgggt cgcctacggg cggcgctccc ggtcccgggt
     3781 cttcggccca caggccctgc tcgggtcgta ccgccgctcg cgttccgcgg tgggcgtgtc
     3841 gaagatctcg acccgccggt tttccgcccg ggctctatcg gtccgaccgg gattcgccgg
     3901 ctgacgctcc ccgaagctct gccgccgcag cgcatccagt acccccgatg acgcgccgaa
     3961 cgagcggagc gtgtcgacca cggcttcgat gcgccaccag ccaaggttgc agttgtactc
     4021 gtcggttccg atgaaatccg cgtgcccgta gatcgtgagc tggagcccgg gccgctcggc
     4081 catggtgcgc gccagccagc ggagcgtatc caactcggcc cggagggaat cgcccacgtt
     4141 ggtcgaatcg aaccggaaca aggcccgaag ggtgatcgcg gggaaaccga tcaccgtgaa
     4201 ggtggaacga tcactcagac cgtccggaca gttcgccgtg accgtgtagc ggccttcccg
     4261 gtcggcgctg aaccggcctt ccgaaacggt gccgccatcg ggcgtcaact ggcaatcggt
     4321 cagcacgcgg gtcgtgttgt tgctgtaatg gccggttacc gtcaactgga cccgctcacc
     4381 tacgtagatc gtggcgctgt ccggg
//
LOCUS       DASWKS010000232         1701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1975255, whole genome shotgun sequence.
ACCESSION   DASWKS010000232 DASWKS010000000
VERSION     DASWKS010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975255"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1043)
                     /locus_tag="VGA78_06810"
     CDS             complement(6..1043)
                     /locus_tag="VGA78_06810"
                     /inference="COORDINATES: protein motif:HMM:NF016148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor head protein"
                     /protein_id="HEX9893616.1"
                     /translation="MLATRFTEQRSGAPFSKSDLARLLRQADQLSESAVKALLEEFDR
                     LHRDLARQLERGILSPEQMDKVLEELDPLLQATANRMGALGLNAHERAWVAGAERTAR
                     LLIGTRYYPGGPGGAFLIGPSGFERQALRAFTFDRIVQITGEMRTGVRSTVINAFLSG
                     RSPFDVITDITHIVGIRDLPTFRELGSTGVSYKAERIWRTEINTAQNAAGHLALEDLN
                     ERRPDGLALLQRMWLATGDDRTRDSHLAAHGQIRSEGEPFDIEGEEAMYPGDPNLSPE
                     LRINCRCREVPWSDEWGERGEVLGAVDDEVGAQIESRAEEGWSVRWAPGQGLVRIRSG
                     TRMMRRRRMRV"
     gene            complement(1045..>1701)
                     /locus_tag="VGA78_06815"
     CDS             complement(1045..>1701)
                     /locus_tag="VGA78_06815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893617.1"
                     /translation="VPDMKTPQLETLLRQLRVFIAGGARIPEHWLAEGGYTNRATAAE
                     MGEPTFRMLIRRQEFVRQMLLTICQYQVDVMVALGLLTEEVQTTAETGEENQTIPARD
                     AFDVVMSEIDVADTTALAGALMQTATAVFRLYASKMLPLKPAIELVAAIAGAMGVEID
                     VDAVLKAMELEDQGTSALADLLKQAQDEDERAAAEKAAAGTGQDQPAEEPMDIMAEPA
                     "
BASE COUNT          232 a          653 c          498 g          318 t
ORIGIN      
        1 gctcgtcata ctcgcatcct ccgccgccgc atcatccggg tgcccgagcg aatccgcacc
       61 aggccctggc ccggcgccca tctcacgctc cagccctcct ccgcccggct ctcaatctgc
      121 gcccccactt cgtcgtccac cgcccccagc acctcgcccc gctcgcccca ttcgtcgctc
      181 cagggcacct ctctgcatcg gcaattaatc ctgagttctg gcgacaaatt cggatcgcca
      241 ggatacatag cctcttcacc ttcgatgtcg aatggctcgc cctccgatcg gatctggccg
      301 tgggccgcca ggtggctgtc ccgcgtccgg tcgtctccgg tcgccaacca catgcgctgc
      361 agcaaggcca gaccgtccgg ccgccgctcg ttcaagtcct ccagcgccag gtggccggcg
      421 gcgttctgcg ccgtgttgat ctccgtccgc cagatgcgct ccgccttgta gctcaccccg
      481 gtcgagccga gctcccggaa ggtcggcaga tcccggatcc ccacaatgtg cgtgatgtcg
      541 gtgatcacgt cgaatgggct gcggccgctc aggaaggcat tgatcaccgt gctccgcacc
      601 cctgttcgca tctcccccgt gatctgcacg atgcggtcga aggtgaaggc ccgcagcgcc
      661 tgtcgttcaa atccgctcgg cccgatcagg aaggcgccgc ccggtccgcc cgggtagtac
      721 cgagtgccga tcagcaggcg ggccgtccgt tcggcgccgg ccacccaggc ccgctcgtgg
      781 gcgttcagcc ccagcgcgcc catccggttg gcggtcgcct gcagcagcgg atcgagctcc
      841 tcaagcacct tgtccatctg ctccgggctc aggatgcccc gctccagctg cctggccagg
      901 tcccggtgca gccggtcgaa ctcctcgagc agcgccttga cggcgctctc gctcagttgg
      961 tcggcctggc gcaacaacct ggccaggtcg ctcttactga agggcgcgcc gctgcgctgc
     1021 tcggtgaagc gggtggccag catctcaggc aggctccgcc atgatgtcca tcggctcctc
     1081 ggccggctgg tcttgtccag ttccggcggc cgccttctcc gccgcggccc gctcatcctc
     1141 gtcctgagcc tgcttcagca aatccgccag ggcgctcgtc ccctggtcct ccagctccat
     1201 cgccttgagc accgcgtcta cgtcgatctc gacacccatc gccccggcaa tcgccgcgac
     1261 cagctcgatc gctggcttga gcggcagcat tttgctggcg tacagccgga acaccgcggt
     1321 cgctgtctgc atcagcgcgc cggccaatgc ggtcgtgtcg gccacatcga tctcgctcat
     1381 cacgacgtcg aaggcatccc gggccgggat cgtctggttc tcctccccgg tttccgccgt
     1441 ggtctgcacc tcctcggtga gcagccccag cgccaccatg acgtccacct ggtattggca
     1501 gatcgtcagc agcatctgcc ggacgaactc ctggcgccgt atcagcatgc ggaaggtggg
     1561 ctcgcccatt tcggccgctg ttgccctatt ggtgtacccg ccttcggcaa gccaatgttc
     1621 cgggatgcgg gccccgccgg cgatgaagac gcgcagctgc cgcagcaggg tctcgagctg
     1681 cggcgtcttc atgtccggca c
//
LOCUS       DASWKS010000233        12327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1598236, whole genome shotgun sequence.
ACCESSION   DASWKS010000233 DASWKS010000000
VERSION     DASWKS010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598236"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..2320)
                     /locus_tag="VGA78_06820"
     CDS             complement(110..2320)
                     /locus_tag="VGA78_06820"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEX9893618.1"
                     /translation="MQQFADEWLVPSVEPLVKTGEIAVLRQLEVDEPLSLWETLVQRK
                     VLTDEQILSAVARRFHLAIADLSQIDTAVREEVPESLVRKFNILPVRITDSHLEVATA
                     NPFDMDAEKMLAFATGREVRMLICAPHKIREKLDELYQKEDVVSKLLEGMGTDAQVTE
                     LTDEEADFVSADEAAQRPIIRLVDTMLADGVSSRASDIHVEPVEGGVVVRYRIDGVLR
                     QVMKIPRAAGIPLISRIKIMGGMDIADRLRPQDGRARVAVNGNPVDLRISTLPASLGE
                     KVVIRILNTRATVLALESLGFEPEEQEIIVRLLQSKEGIVLVTGPTGSGKTTTLYASL
                     RLVQNEGVNIVTVEDPVEYRLGSNIVQVQVNEKAGLTFASALRSILRQDPDVVLIGEV
                     RDQETAQIAVQAALTGHLVLSTLHTNDAPNSVTRLLDMGMEAYKIASALRGIVAQRLL
                     RRLCPVCKEVMDTALPVYMKRYIPDGSVLYKPVGCKECAGTGYRGRFAITEILTISPE
                     IEGLIGSGATADKLLAAARTQGMRSLFESGLRHMLRGQTSVEELLRVTDIPSEHMRGV
                     PVVKPASPGSKAAAGSATATPGEPHDVAWDLIDEPLDLGEGPDGKGTVLLVEDEDQLR
                     RVMKDLLERDGYTIVEAADGVQALEQIDRHNPDVILLDLNLPGMDGYGVLSNIRSRPT
                     TATTPVIVLTAKGDEDNEVRVLKLGADDFLTKPFRARALSARLESVINRRRSAR"
     gene            complement(2373..4367)
                     /locus_tag="VGA78_06825"
     CDS             complement(2373..4367)
                     /locus_tag="VGA78_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893619.1"
                     /translation="MIAPMLLLVLQQWNSPDALALVEQAIQRRRQSEAGLARYTSQAR
                     GVVLFQVQVGAGDDAPLQLIKADELAVEVYWEAPNRSKQTVKAWRERRFLPTDIQYHR
                     DHLGVVTDDFGDVIRVGEGDEVRNVPHPLSPGGPEAYDYALGDSLTLASGAARLTVRE
                     VLVRPREPSLPRAAGTMFLDAGSADLVRFRFSFTGPAYLQAQLEDITVVLERALFDQR
                     YWLPWRQEIEIRRRLSWLDFPFRTIIRGRWEIDDYDVAAAIIPGRLAGGPYGGLRSSS
                     PDTGWAEPLDSAIARSGGNLARADLDRARTEVARLVTAAARAGQPPSRLALSSVSNLG
                     RVNRVQGLALGAGATLRPGGGIVELRPRVGYGFSNRRLTGGAELSVQVSPVRLTFSAT
                     RETRDLSDWPAISGGLNSILAQEAGQDHGDWVLLDRLMAGLRWQPATLAIFAEAGVET
                     SRSLGVSATPARGSYRPNPPLGDGSIWTGRLGFTSRWRSRAGRVFTLAATVEAGDLDR
                     GYLRTTLETSARVPRGTSILEFQGRAGWSNGAVPAWRNFVLGGRGTLPGESFRAFGGS
                     RMALARLEWRVPVTLPSPGLPGWVAAASGVTIAPFAAVGWSDEAPAGLPWTVTDGLRP
                     VLGVASELLFNVLRLEAGWAPRAGRWSVILDASPSWWPVL"
     gene            4477..5058
                     /locus_tag="VGA78_06830"
     CDS             4477..5058
                     /locus_tag="VGA78_06830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893620.1"
                     /translation="MLVGIVACGGGAPAQVFDPNVTPLSPPLPLSQVFVLESWGATPT
                     DTVLTFHAAEERSVVLRRESPDNSLFTKVTFPAGSLIPTSGDSVMVRLTTRPGLYGVD
                     LATEAQAQQGAQITFSYAIHFVAPAGARTAYGSEIRFEQFLGVGRLDGDSTLVFLDSW
                     RSASDLLMATIPGPGRYLVAAPRNPPGFKAIVF"
     gene            5063..6589
                     /locus_tag="VGA78_06835"
     CDS             5063..6589
                     /locus_tag="VGA78_06835"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9893621.1"
                     /translation="MTVLRFEQVGGPLRFRVSPGRTLTLGRAPQCEIVVADPSVSRRH
                     AELEGHDGEATLRDLGSANGTMVNGVRASESAVHAEDLVTFGAVTFRVTTEETAALAD
                     ELPSGIAIRALTVPVTEGHARERRALERLLDLAAGLTSEGALEPRLDGIVDLAFEFVD
                     ADRVALLLVSPPDGALAPAGGRSRIGDTVPRVPRAIAERAVAERAAVVTESAMDDARF
                     QSGSVKLQQVRSALCVPLLAPDGAVVGVLYADTITRPVPFGDDEARALHAFAGLAATA
                     ITRARFVEEARKARDIRASFERFFAPSVAAAIAATPGQAALGGQQLPVAVLFGDIRGF
                     TPLAEQASPDQVAALLGDYFAAMVDAVFEHHGTLDKFTGDGVMAVWGAPFPLEDAADR
                     ALAAARAMRAELARYNQRRLAAGQAPIEAGFGLSYGDVFAGNIGSERRLEYTVVGDAV
                     NLAARLCEMAERGEILVDEDLATRLTDRSGLEPLAAVTIRGRSGTVRAFRVVEDGRRG
                     "
     gene            complement(6599..7216)
                     /locus_tag="VGA78_06840"
     CDS             complement(6599..7216)
                     /locus_tag="VGA78_06840"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX9893622.1"
                     /translation="MDMHPIVLASQSPRRRQLLEMLGLTVIVSPTQVQEVRLPRETPS
                     AYAGRLARDKARAVPGALVLGADTIVVIDGEVLEKPVDADDALRMLRRLQGRRHEVIT
                     SVCLLADGDSYEAQDATVVQFLPADDATLRAYIATGEPLDKAGAYGIQGYGAALVERV
                     EGDFFGVMGLPLRLVLELLARAGKPYRFPVEEGRGGSKRVEEGSS"
     gene            complement(7310..7747)
                     /gene="dtd"
                     /locus_tag="VGA78_06845"
     CDS             complement(7310..7747)
                     /gene="dtd"
                     /locus_tag="VGA78_06845"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: protein motif:HMM:TIGR00256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HEX9893623.1"
                     /translation="MRLVLQRVNQASVTIDGRLAGAIERGFCLLVGFTADDTLDQVRW
                     MADKVAGLRVFSDAEGKMNLALADVGGAVLVVSQFTLYGDAEKGRRPSFIAAARPEVA
                     IPLYDGFIAELRGRGLQVETGEFGAMMQVSLVNDGPVTLILDR"
     gene            complement(7885..9711)
                     /gene="glmS"
                     /locus_tag="VGA78_06850"
     CDS             complement(7885..9711)
                     /gene="glmS"
                     /locus_tag="VGA78_06850"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEX9893624.1"
                     /translation="MCGIVGYVGPRPAADILLEGLRRLEYRGYDSAGVAVINGGGVKL
                     RKAAGKLSVLRDLLKDDKPEGTVGIGHTRWATHGAPTTPNAHPHLDRSGRIAVIHNGI
                     IENANTIRTLLLQRGHQFASETDTEVLAHLIGEYYQGSLEEAVAAALRDVQGAYGIAV
                     VSADEPDLVVAARNGSPLLVGVGEKEYFIASDASAILEHTRSVIYLDDGEMAVLTRSG
                     YRIRNLVKEKIDKPVNQIEWDLATIERGGYAHFMLKEIFEQPESVANTLRGHLLEEEG
                     NAKVRGLNLTDEQLKSFTRVVITACGTSWHAGLIGEYMLEEMARIPVEVEYASELRYR
                     NPVLDERTLVIAISQSGETADTLAAVREAKRRGARAIGLVNVVGSSIAREVSGGLYLH
                     AGPEVGVASTKAFSSQVAALALVALRMARLRNVSIIQGRQFVEALRQLPTLLRQVLDR
                     AHEVERLADMFDGTSNALYLGRGVNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIA
                     LIDENMPVVFIAPKDAVHSKIMSNVEEVKARGGRVIALVSEGDQEIGRLADATFTIPV
                     THDLLTPILNGVPLQLLAYYVAVRRGCNVDQPRNLAKSVTVE"
     gene            complement(9727..11103)
                     /gene="glmM"
                     /locus_tag="VGA78_06855"
     CDS             complement(9727..11103)
                     /gene="glmM"
                     /locus_tag="VGA78_06855"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR03990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX9893625.1"
                     /translation="MIDGLIISVSGMRGHVGRDLTPELVARYAAALGAWAAERGRPLV
                     VIGRDARTSGPMFARAATAGLQSVGCDVVDLGLVPTPTTQLAVEHHRAGAGLMLSASH
                     NPIEWNALKLIGSDGIFLDAEAGARVREIADAGPPRAGWDGLGTLTADPEAVDRHLDL
                     VLNLPWIDLVAIRRRRAHVALDCVRGAGGVAIPPLLERLGCRVTAIHLEPDGHFPHEP
                     EPTPENLKELGALVRDAGADIGMAVDPDVDRLALVDETGQAIGEDYTLAFAVRAVLEQ
                     SDRRTDGPTGSPPVVVANLSTSLVVEDAAKDYGARFVRAPVGEANVAATMKAENALIG
                     GEGNGGVILPALHIGRDAPLGVALVLQYFTAHQATVSALVGGVPGYRIVKAKAPRGAD
                     LPAVYGRLRQRFADARADDRDGLRLAWSDRWVHVRPSGTEPIIRLIAEAPAEADAEQL
                     ISACRELL"
     gene            complement(11152..12231)
                     /locus_tag="VGA78_06860"
     CDS             complement(11152..12231)
                     /locus_tag="VGA78_06860"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX9893626.1"
                     /translation="MSHPIIEESTSDGVGSARCLVVDDDPLVRRTLARVLKAQGMAPV
                     EVESAERALELLEREGGAPLVITDIYMPEMNGIELLREIRQRWPDTGVMMITGVAEVG
                     TAVECLQQGALDYLAKPVQLEEVRVRIHHALERHRLALENRYLQQSYQERLEAQLRAL
                     ARRNKEMFLGQIQMAVHMLEKKDVYTRGHSERVAVYAVKTAIQMGFTGDLLDQIRLGG
                     ELHDIGKIGTRDDVLNKPGPLTPDEFEEIKKHVVEGEEILEPLRRDHPMVLDIVRSHH
                     ERLDGSGFPDRLSGDAIPLVARLVSVADAFDAMTTSRAYRPSRTAGEAMDELARCSGQ
                     HFDPSIVAAFQRAFPDVHRLPIAAA"
BASE COUNT         1997 a         4256 c         4081 g         1993 t
ORIGIN      
        1 gttcactggg catcagagcc tcctggcctc cccgaatgaa acgagggacc tcttcattcg
       61 gaagcgatcc ctcgtcgagt ctcggtaccg ggtcggaggc actaccgcat catcgggcgc
      121 tgcgtctccg gttgatcacc gactcgaggc gagccgagag cgcccgggcg cggaatggct
      181 tggtgagaaa gtcatccgcc cccagcttga ggacccggac ctcgttgtct tcgtcaccct
      241 tggcggtgag cacgatcacg ggcgtcgtgg cggtggtggg gcgggaccgg atgttgctca
      301 ggaccccgta gccgtccatg ccgggcagat tcaagtcgag cagaataacg tccggattgt
      361 gacggtcgat ctgctccagc gcctgcacgc cgtccgccgc ctcgacgatg gtgtagccat
      421 cgcgctccag caggtccttc atcacccgcc gcagctgatc ctcatcctcc accagcaaca
      481 cggtgccctt gccgtccggc ccctcgccca gatcgagcgg ctcgtcgatg agatcccaag
      541 cgacatcatg cggctcgccc ggagtggcgg tggccgatcc ggccgcggcc ttggacccgg
      601 gcgaggcggg cttgaccacc ggcacaccgc gcatgtgttc ggacggaata tcggtgaccc
      661 ggagcagctc ctccaccgag gtctgtcccc gcagcatgtg cctgaggccg ctctcgaaga
      721 gggacctcat gccctgggtc cgggcggcag caaggagctt gtcggccgtg gcgcccgagc
      781 caatgagtcc ctcgatctcc ggcgagatgg tgagaatctc ggtgatggcg aagcggccgc
      841 gataaccggt ccccgcgcac tccttgcaac ccaccggctt gtacaggacg ctcccgtcgg
      901 ggatgtagcg cttcatgtag acgggcaggg ccgtgtccat cacttccttg cagaccggac
      961 acagccggcg caacagccgc tgggccacga tgccccgcag cgccgaggcg atcttgtagg
     1021 cctccattcc catatccagc agacgcgtca ccgagttggg ggcatcgttg gtgtgcaggg
     1081 tggagaggac cagatggccg gtgagcgcgg cctggacggc gatctgggcc gtttcctggt
     1141 cgcggacctc gccgatcagc accacgtcag ggtcctgccg cagaatggag cggagcgccg
     1201 aggcgaaggt gagcccggcc ttttcgttca cctggacctg cacgatgttg ctacccagcc
     1261 ggtattcgac cggatcttcc accgtcacga tattcacgcc ctcgttctgc accagccgca
     1321 gggaggcgta cagcgtggtg gtcttgcccg acccggtggg gccggtgacc aggacgatgc
     1381 cttccttgct ttgcagcagg cggacgatga tctcctgctc ttcgggctcg aaccccaacg
     1441 attccagggc gagcaccgtc gcacgggtgt tcaggatccg gatcaccacc ttctcgccca
     1501 gggaggcggg aagggtcgag atccggagat ccaccgggtt gccgttcacg gccacccggg
     1561 cgcgaccgtc ctggggccgg agccggtcgg cgatgtccat cccgcccatg atcttgatgc
     1621 gggagatgag cggaatgccc gcggcccgcg ggatcttcat gacctgccgc aagaccccgt
     1681 caatgcggta gcggaccacc acgccgcctt cgaccggctc gacgtggatg tcgctcgccc
     1741 ggctggacac gccgtcggcg agcatggtat cgaccagacg gatgatgggc cgctgggccg
     1801 cttcgtccgc cgagacaaaa tcggcctctt catccgtgag ctcggtgacc tgggcatcag
     1861 ttcccatgcc ctcgagcagc ttcgagacca cgtcttcctt ctggtacagc tcgtccagct
     1921 tctcgcggat cttgtggggc gcgcagatga gcatgcgcac ctcgcggccg gtcgcgaacg
     1981 ccagcatctt ctcggcgtcc atatcgaacg gattggcggt cgccacctcg agatgggaat
     2041 cggtgatgcg gaccggcagg atgttgaact tccggaccag cgactcgggg acttcttccc
     2101 ggaccgcggt gtcgatctgg gagagatcgg cgatggccag atggaagcga cgcgcgaccg
     2161 cgctcaggat ctgctcgtcg gtcaggacct tgcgctggac cagggtttcc cacagcgaga
     2221 gcggctcgtc gacctcgagc tggcgcaaga ccgcgatctc ccctgtcttg accaggggct
     2281 cgaccgaagg gaccaaccat tcatcagcga attgctgcat gatattcaag tctaccccgc
     2341 tccccggcac cggcggtagc cgatgatcga ctctacagca cgggccacca ggaggggctc
     2401 gcgtccagta tgaccgacca gcggcccgcc ctgggagccc aaccggcttc aaggcgtaag
     2461 acgttgaaca gcaattcgct tgccaccccc aagaccggtc tcaggccatc ggttacagtc
     2521 cagggaagcc cagcgggcgc ttcgtccgac cagcccaccg ccgcgaaagg cgcgatggtc
     2581 acgccactgg ccgccgcgac ccatccgggc aacccgggcg acggcagcgt gaccggcacc
     2641 cgccactcca gccgggccag ggccatccga ctcccgccga aggcacgaaa ggattcgccg
     2701 gggagcgtac cccggcctcc caggacgaag ttccgccagg ccggcaccgc cccgttgctc
     2761 cagcctgccc ggccctggaa ttccaagatg ctggtcccac ggggcacgcg agcactcgtt
     2821 tcgagagtag tcctgagata gccccggtcg aggtccccgg cttcgacggt cgccgccagg
     2881 gtgaagaccc tcccggcccg ggagcgccac cgggaggtga aacccaatcg gccggtccag
     2941 atcgaaccgt cccccagagg aggattgggg cggtagctcc cgcgggccgg tgtcgcgctc
     3001 actcccaggc tccgcgaggt ttcgacccct gcttccgcga agatcgcgag cgtcgccggc
     3061 tgccatcgga gaccagccat caggcggtcc agcagaaccc agtcgccgtg atcctggcct
     3121 gcctcctgcg ccaggatgga gttgagtccg ccgctgatcg cgggccagtc gctcagatcg
     3181 cgggtctcgc gcgtggcgct gaaggtgagc cgcaccggcg aaacctgcac cgacaattcg
     3241 gcccccccgg tcagccgtcg gttggaaaac ccgtacccga cccggggcct gagctcgaca
     3301 atgcctccac caggccgcag ggtcgcgccg gctcccaggg cgagtccctg aacccggttc
     3361 acccgcccca gattactgac ggagctgagc gccaggcgag agggaggctg gccggcccga
     3421 gcggcggccg taaccagtcg cgccacctcc gtccgggctc ggtccaggtc cgcccgcgcc
     3481 aggttgccac ccgaacgcgc gatcgcggaa tccagcggtt cggcccatcc ggtatcggga
     3541 ctcgagcttc gtaagcctcc gtacgggcct ccggccaggc gcccggggat gatcgcggcg
     3601 gcgacgtcat agtcatcgat ctcccagcgg ccccggatga tggtccgaaa cggaaagtcg
     3661 agccacgaaa gccggcggcg aatctcgatt tcctgacgcc agggcagcca gtaacgctga
     3721 tcgaacagcg cccgttcgag cacgacggtg atgtcctcca gctgggcctg gaggtaggcc
     3781 gggccggtga agctgaaccg gaaccggacc agatcggcgc tcccggcatc gaggaacatg
     3841 gtcccggcgg cgcggggcag cgacggttcg cgggggcgca ccaatacctc acgcaccgtg
     3901 aggcgggccg cgccgctcgc cagggtgagc gagtcgccca gggcgtagtc gtaggcctcc
     3961 ggccctccgg gcgacagcgg gtggggcacg ttgcggacct cgtcgccctc gcccacccga
     4021 atgacatcgc cgaagtcatc ggtgaccacg ccgagatggt cgcgatgata ctggatatcg
     4081 gtcgggagaa accgccgttc gcgccacgcc ttcacggtct gcttgctccg gttcggcgcc
     4141 tcccaataca cttccaccgc cagctcatcg gccttgatga gctgcaacgg ggcgtcgtcg
     4201 ccggcaccga cctgcacctg gaagagcacg acgccccggg cctggctggt gtaccgcgcc
     4261 aggccggcct cgctctgacg gcgcctctga atcgcctgct cgaccagggc gagggcgtcc
     4321 ggcgaattcc actgctgcag taccagcagg agcatggggg cgatcatgga ttcaaaacta
     4381 ggtcggaagg gtcggaagag tcgtaagggt cggaatagcc cgccgggctt ccgaccattc
     4441 cgaccattcc gaccgttccg accgttccgg ccagcagtgc ttgtcggaat agtggcatgc
     4501 ggcggaggag caccggccca ggtgttcgat cccaacgtga ccccgttgtc tccaccgctg
     4561 ccgctctcgc aggtgtttgt cctggagtcc tggggcgcga cccccacgga tacggtcctc
     4621 accttccacg ccgcagaaga gcgaagcgtg gtgctgcggc gagagtcgcc ggacaacagc
     4681 cttttcacca aggtcacctt ccccgccggg agtctgatcc cgacctcggg cgactcggtc
     4741 atggtacgac tcaccacccg gcccggactc tatggggtgg accttgccac cgaagcccag
     4801 gcgcagcagg gcgcccagat caccttcagt tacgccatcc acttcgtggc gcccgctggc
     4861 gcccggactg cctatgggtc ggagatccgg ttcgagcagt tcctgggcgt gggacggctc
     4921 gacggcgaca gcaccctggt ctttttggac agctggcgct cggcgtcgga cctgctgatg
     4981 gcgacgatcc ccggaccggg tcgctatctg gtcgcggccc cccggaaccc gcccggcttc
     5041 aaggccatcg ttttctgacc cgatgaccgt gctccgcttc gagcaggtgg gcggtccatt
     5101 gcggttccgg gtatcaccgg ggcgaaccct cacgctgggc cgcgccccgc agtgtgaaat
     5161 cgtggtggca gacccgtcgg tttcgcggcg gcacgccgag ctcgaagggc atgacgggga
     5221 agccacgctc cgggatctcg gcagcgccaa cgggaccatg gtgaatggtg tgcgcgcctc
     5281 ggaatcggca gtgcacgcgg aggacctggt gaccttcggc gccgtcacct tccgggtcac
     5341 gaccgaggag accgcggcgc tggccgacga gctcccctcg gggatcgcga tccgcgcctt
     5401 gacggtgccc gtcaccgagg gacacgcgcg ggaacggcgg gcgctggaac ggctgctgga
     5461 tctggcggcg ggactgacct ccgagggcgc gctggagccc cggctcgacg ggatcgtgga
     5521 tctcgcgttc gagttcgtcg atgccgaccg ggtcgcgttg ttgctggtga gcccgccgga
     5581 cggcgcgctg gctccggcgg gggggaggag tcgcatcggc gacaccgtgc cccgggtgcc
     5641 gcgagccatc gccgagcggg ccgtggccga gcgggcggcc gtcgtcaccg aaagcgcgat
     5701 ggacgacgcc cgctttcaga gcggctcggt caagctgcag caggtgcgga gcgcgttgtg
     5761 cgtccccctg ctcgcgcccg atggcgcggt ggtcggcgtg ctttatgccg acacgatcac
     5821 ccggccggtc ccgttcggcg acgacgaggc ccgggccctg catgccttcg ccggtttggc
     5881 cgccaccgcc atcactcggg cccggttcgt cgaggaggcc cggaaggcgc gcgacatccg
     5941 ggcctcgttc gagcggttct tcgcccccag cgtggccgcg gccatcgcgg cgacccccgg
     6001 ccaggcggca ctgggcggcc agcaactgcc ggtcgcggtg cttttcggag acatccgggg
     6061 cttcaccccc ctggcggagc aggcttcacc ggaccaggtc gccgcgctgt taggcgacta
     6121 cttcgccgcc atggtcgacg cggtgttcga gcatcacggc accctggaca aattcaccgg
     6181 cgacggcgtc atggcggtgt ggggcgcgcc gttcccgctg gaggatgcgg ccgatcgcgc
     6241 gctggcggct gcccgggcga tgcgggcgga gctggcccgc tacaaccagc ggcggctggc
     6301 ggcgggccag gcaccgatcg aagctgggtt cgggctcagt tacggcgacg tctttgccgg
     6361 caacatcggg agcgagcgcc gactggagta caccgtcgtg ggcgacgcag tgaacctggc
     6421 cgccaggctg tgcgagatgg cggagcgggg agagatcctg gtggatgagg atctggccac
     6481 ccgcctcacc gatcgatccg gcctggagcc gctggcggcg gtaactattc gaggtcgttc
     6541 ggggaccgtt cgcgcctttc gcgtggtcga agacggtcga agagggtagg gaccagctct
     6601 aggaagaacc ttcttcgacc cgcttcgacc ctcctcgacc ctcttcgacc ggaaaccggt
     6661 acggtttccc ggcccgggcc agcagctcga gcaccagtcg cagcggcagc cccatcaccc
     6721 cgaagaaatc gccttcgacc cgctccacca acgcggcgcc atagccctgg attccatagg
     6781 cgcccgcctt gtccagcggc tccccggtcg cgatgtaggc ccgaagggtg gcgtcatcgg
     6841 ccggaagaaa ctgcaccacc gtcgcgtcct gagcctcata cgagtcgcca tcggccagaa
     6901 ggcagaccga ggtgatgacc tcgtggcgcc gtccctgcag ccgccgcagc atccgcagag
     6961 catcgtctgc atcgaccggc ttctccagca cctccccgtc gatcaccacg atggtatcgg
     7021 ccccgagcac cagggcgccc ggcacggcgc gggccttatc ccgcgccagc cggccagcat
     7081 aggccgacgg cgtctcccgg ggcaggcgca cctcctgcac ctgggtgggg gacacgatca
     7141 ccgtcagccc cagcatttcg agcagctggc ggcgacgggg cgactgggag gcgaggacga
     7201 tggggtgcat atccattgac gattgaagat tggcaattga cgattgctcc ccgacgccgc
     7261 gagggtaatc gtcaacggtc aatcgtcaat ggtcaatcat gggttgactt tagcggtcga
     7321 ggatgagcgt caccggcccg tcattgacca gcgacacctg catcatcgcc ccgaactcgc
     7381 cggtctccac ctgaagtccc ctcccccgca actccgcgat gaagccgtcg tacaacggga
     7441 tcgccacctc gggtcgggcc gctgcgatga agctggggcg gcgccccttc tccgcgtcgc
     7501 cgtacagcgt gaactgcgag accaccagca ccgcgccgcc cacgtccgcc agggccaggt
     7561 tcatcttgcc ttcggcgtcg ctgaagactc tgagcccggc caccttgtca gccatccacc
     7621 tcacctgatc cagcgtgtca tccgcggtaa agccgaccag cagacagaag ccgcgctcga
     7681 tggccccggc cagccgccca tcgatcgtca ccgaagcctg gttcacccgc tgaagcacga
     7741 ggcgcattgt gatggtcaaa gggggtcaaa gggggtcaaa gagggtcgaa gctggtcgaa
     7801 gacggtcgaa gggagtcgag gacggtcgaa gatggtccgc cccacccttc gactacttcg
     7861 accgccttcg accgacttcg accgttactc cacggtcacc gacttggcga gatttcgggg
     7921 ctggtcgacg ttgcagccgc gccggaccgc cacgtagtag gccagcagct ggagcggcac
     7981 gccgttcagg atcggggtca gcaggtcgtg ggtcaccggg atggtgaagg tggcgtcggc
     8041 cagccgtccg atctcctgat cgccttccga taccagggcg atgacccggc cgccgcgggc
     8101 tttcacctct tccacattgg acatgatctt cgaatgcacc gcatctttgg gcgcgatgaa
     8161 gaccaccggc atgttctcgt cgatcagggc gatcggcccg tgcttcattt ccgcggccgg
     8221 atatccctcg gcgtggatgt aggagatttc cttgagcttg agcgcgcctt ccagcgccac
     8281 cgggaagttc accccgcggc ccaggtagag cgcgttgctg gtgccgtcga acatgtcggc
     8341 cagccgctcg acttcgtggg cccggtcgag cacctggcgc aacagggtgg gcagctggcg
     8401 cagcgcctcc acgaactggc ggccctggat gatgctgacg ttgcggaggc gcgccatccg
     8461 cagcgcgacc agggccaggg cggccacctg gctcgagaac gccttggtgc tggccacacc
     8521 gacttccggc ccggcgtgca ggtagagacc gccgctcacc tcccgggcga tggaggagcc
     8581 gaccacgttc accaggccga tggcgcgggc gccccgccgc ttggcttcgc gcacggccgc
     8641 cagtgtgtcc gcggtctcgc ctgactggga gatcgcgatc accagggtgc gctcgtccag
     8701 tacgggattg cgatacctga gctccgaggc atactccact tccaccggga tccgcgccat
     8761 ctcctccagc atgtactcgc cgatcaggcc ggcatgccag gaggtgccgc aggcggtgat
     8821 caccacccga gtgaagctct tgagctgctc gtcggtcagg ttgaggcccc gcaccttggc
     8881 gttgccctct tcctcgagca gatggccgcg cagcgtgttg gccacgctct ccggctgctc
     8941 gaagatctcc ttcagcatga agtgggcata cccgccccgt tcgatggtcg ccaggtccca
     9001 ttcgatctgg ttgaccggct tgtcgatctt ttccttgacc agattgcgga tccggtagcc
     9061 gctccgggtc agcaccgcca tctcgccgtc gtccagatag atcaccgagc gggtgtgctc
     9121 tagaatcgcc gacgcatccg aggcgatgaa gtactccttc tcgcccacgc cgaccagcag
     9181 gggcgatccg ttccgggccg ctaccaccag atcgggctcg tcggccgaga ccaccgcaat
     9241 gccgtaggct ccctgcacgt cgcggagcgc ggcggccacc gcctcttcca gcgagccctg
     9301 gtagtactcc ccgatcaggt gggccaggac ctcggtgtcg gtctccgagg cgaattggtg
     9361 tccccgctga agcagcaacg tccggatggt gttggcgttc tcgatgatgc cgttgtgaat
     9421 caccgcgatc cggcccgacc ggtcgagatg gggatgggcg ttgggcgtgg tgggggcgcc
     9481 atgggtggcc cagcgggtgt ggccgatccc gacggtgcct tcgggcttgt cgtccttgag
     9541 cagatcgcgc aggaccgaga gctttcccgc cgccttgcgc agcttgaccc cgccgccgtt
     9601 gatgaccgcg acaccggccg agtcataccc gcgatactcg agacgcctca gtccttcgag
     9661 caggatatct gcggccgggc gaggcccgac gtaaccgacg attccgcaca tgacgccact
     9721 acctcactag agcagttccc ggcacgcgga gatcaactgc tccgcgtccg cttccgccgg
     9781 tgcctcggcg atcaaccgga tgatgggttc ggtcccggac gggcgcacgt gcacccagcg
     9841 gtccgaccat gccagccgga ggccatcccg atcatccgcc cgcgcgtccg cgaaacgctg
     9901 ccggagccga ccgtaaaccg cggggagatc ggcaccccgc ggggccttgg ccttgacgat
     9961 ccggtacccg ggcacgccgc caaccagcgc ggaaacggtg gcctgatgtg cagtaaaata
    10021 ctgcaagacg agggccaccc ccagcggcgc atcccgaccg atgtggaggg ctggcagaat
    10081 gacaccacca ttcccctcac cgccgatcag ggcgttttcc gccttcatgg tcgcggccac
    10141 gttggcctct cccaccggag ccctgacgaa ccgggcgccg taatccttcg cggcatcctc
    10201 aacaaccagt gaagtcgaga gattggccac tacaacggga gggctgcccg tcgggccgtc
    10261 ggtccgtcgg tccgactgtt ccagcaccgc tcggaccgcg aaggccaagg tgtagtcctc
    10321 gccgatcgcc tggccggtct cgtccaccag cgccagccgg tccacgtccg ggtccaccgc
    10381 catgccaatg tcagccccgg catcgcgtac cagcgcgccc agctccttca ggttctccgg
    10441 tgtgggctcc ggttcgtgag ggaagtggcc gtcgggttcg agatggatgg cagtcacccg
    10501 gcaacccaac cgctccagca gcggcggaat cgcgacaccg ccggcgcctc ggacgcagtc
    10561 gagcgccacg tgcgcccggc gccggcggat cgccaccagg tcgatccagg gcaggttgag
    10621 caccagatcg aggtggcgat cgaccgcctc cggatcggcg gtgagggttc ccaggccatc
    10681 ccagccggcc cggggcggtc ctgcatcggc gatctcgcga acccgggctc ccgcctcggc
    10741 gtcgagaaag atcccgtcgg agccgatcaa cttgagcgcg ttccactcga tggggttgtg
    10801 tgatgcgctg agcatcagtc cggcgccggc gcggtgatgc tcgaccgcca actgggtcgt
    10861 gggcgtcggt accagcccca ggtcgaccac atcgcagccg accgattgca ggccggcggt
    10921 tgcggcgcgg gcgaacatcg gtccgctggt gcgggcgtca cgaccaatca cgacgagggg
    10981 acgtccgcgt tccgcggccc atgcaccgag cgccgcggcg tagcgggcca ccagctccgg
    11041 cgtcaagtcg cggcccacat ggcctcgcat gcccgaaacc gaaatgatca agccgtcaat
    11101 catcgcacac gggcgggcag acgggcaggc ggacaggcgg gcgggccgtc ttcacgcggc
    11161 tgcgatcggc aaccggtgga cgtcgggaaa ggcgcgctgg aacgcggcca cgatcgaagg
    11221 atcgaaatgc tgcccggaac accgggccag ctcgtccatc gcttcgcccg cggtccggga
    11281 ggggcggtag gcgcggctcg tggtcatggc gtcgaaggca tcggcgaccg acaccaggcg
    11341 cgccaccagc ggaatcgcgt ctccgctcag ccggtcggga aacccgctgc cgtcgagccg
    11401 ctcgtgatgg gatcgcacga tgtccagcac catggggtga tcgcggcgga ggggttcgag
    11461 gatctcctcg ccctccacca catgtttctt gatctcctcg aactcgtcag gggtcagggg
    11521 gccgggtttg ttcagaacgt catcgcgggt cccgatcttg ccgatgtcgt ggagctcccc
    11581 gcccaaccgg atctggtcca gcagatcgcc ggtgaagccc atctggatgg ctgtcttcac
    11641 cgcatacacc gccacccgct cggagtggcc ccgggtatac acgtcttttt tctcgagcat
    11701 gtgcacggcc atctgaatct ggcccagaaa catctccttg ttccggcgcg ccagcgcccg
    11761 gagctgcgct tcgagccgct cctggtagct ctgctggagg taccggtttt ccagcgccag
    11821 ccggtggcgt tccagggcgt ggtgtatgcg cacccggact tcctccagtt ggaccggctt
    11881 ggccaagtag tcgagcgcgc cctgctgcag gcattcgacc gcggtaccga cttcggcgac
    11941 cccggtgatc atcatcacgc cggtgtcggg ccagcgttgc cggatctcgc gcagcaactc
    12001 gatgccattc atctctggca tatagatgtc ggtgatgacg aggggggcac ccccctcccg
    12061 ctccagcagc tccagcgccc gctcggcgga ctcgacttcc accggcgcca tgccctgggc
    12121 cttgagcacc cgggccagcg tccggcgcac cagcggatcg tcgtcgacta cgaggcagcg
    12181 ggcggacccg acgccgtccg aggtcgactc ctctatgatc gggtgggaca cagtcctaac
    12241 ctaatgtggc gggcgcaatt cgctcaactg aacgaccggt cgatgggggg cgaagggggc
    12301 gaagggggtc gaagaggggt cgaagcc
//
LOCUS       DASWKS010000234         2159 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1598252, whole genome shotgun sequence.
ACCESSION   DASWKS010000234 DASWKS010000000
VERSION     DASWKS010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598252"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="VGA78_06865"
     CDS             <1..424
                     /locus_tag="VGA78_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893627.1"
                     /translation="GLREYMAQGIPVIAHARNVSFVQGIAAARKTVAPDGLSRGGRAP
                     QVRSVRDTLVVGSGESQVVLYPIATAHVEGILAAWVPSARILFTSDVLSPVANQPIAK
                     PGSVELVTFARLNGLAPSRFVGGHGVVVEWSAVEAAAR"
     gene            502..>2159
                     /locus_tag="VGA78_06870"
     CDS             502..>2159
                     /locus_tag="VGA78_06870"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX9893628.1"
                     /translation="MPTRLRSICLSCNLRRLFVLGLPLFSTPAGAQDPCSTGPGLRPS
                     RDLYCIELFPAAGVDGPSGTIALNRAASPFTVAVTAEGRHRHRLVATLAGLPEPSRYG
                     PYLSYVAWATTPVLDTVIRLGEVGNGRTELPEISLERFMVLISAESGPSVAEWTGKLV
                     LRGESASNRMRPPDVLEFTLGTAAASDHAGHAPTRDSLGWTAVPMPPALPMLPAEMTL
                     RPGVRAWLPAATSATPAARPREVRTLQTGDTLVLEAGVVRRTLAGRSYVMYGFNGQYP
                     GPLLIVGQQAEITVRFRNRLDQPSTVHWHGVRLDNRFDGVPGLTQDPVEPGGEFVYQL
                     RFPDAGIYWYHPHVREDIQQDLGLYGNILVRSPRPDAWSPAHREEVLLLDDLLVGDDG
                     LVPYGQDHPTHALMGRFGNLFLVNGEPGWRGTARPGEIVRFYFTNASNTRTFNLSFPG
                     ARMKLAGSDLGPFQREEWVESVVLGPAERYVVQVRFDRPGRVVLQNQVRAIDHLFGRY
                     FSEADTLGVIQVEGEPAGPLSGHDRLRVDSATTREVREAVEGSKR"
BASE COUNT          312 a          712 c          769 g          366 t
ORIGIN      
        1 cggtctgcgg gagtacatgg cccagggaat tccggtcatc gctcacgcga ggaacgtgag
       61 cttcgtgcag gggatcgccg cggcccggaa gacggtcgcg ccggacgggc tgtcgcgcgg
      121 tggccgagct ccccaggtgc ggtcggtacg ggacacgttg gtggtgggaa gcggtgaatc
      181 gcaggtggtg ctctatccga tcgccaccgc ccatgtcgag ggcatcctcg ccgcctgggt
      241 gccctccgcc cggattctct ttaccagcga cgtgctgtcg ccggtggcca atcagccgat
      301 cgccaagccg ggcagcgtgg agctggtcac gtttgcccgg ttgaacgggt tggcgccctc
      361 ccggttcgtg ggcgggcatg gggtggtggt ggagtggtcg gccgtggaag cggcggcgcg
      421 gtaactaccg gtcgaagggg tcgaagacgg tcgaaggcgg tcgaaggggt cgaaggcggt
      481 cgaggacggt tacgttccac cgtgccgact cgtcttcgga gcatttgcct gtcgtgtaat
      541 ctgcgaaggt tattcgtcct cgggctcccc ctcttttcga cccccgccgg cgcccaggat
      601 ccctgctcga ccgggccggg gctccggccc agccgcgatc tctactgtat cgagctgttc
      661 ccggccgccg gggtcgatgg gcccagcggg actatcgccc tcaaccgggc cgcgagcccc
      721 ttcacggtcg cggtcacggc cgaggggcgg caccggcacc gactggtggc gacgctggcg
      781 gggttgcccg agccgagccg gtatggtccc tacctcagct acgtcgcctg ggccaccacg
      841 ccggtcttgg acaccgtcat tcggctgggt gaagttggta acggtcgcac cgagctgccc
      901 gagatctcgc tcgagcgctt catggtgctg atttcagccg agtcgggccc tagtgtggcg
      961 gagtggaccg gcaagctggt cctgcggggg gaatccgcca gcaaccggat gcggcctccc
     1021 gacgtcctgg aattcacgct cggtaccgcg gctgcgagcg atcacgcagg gcatgccccg
     1081 acgcgcgact cgttaggctg gaccgcggtc ccgatgcctc ccgcgctccc gatgctgccg
     1141 gcggagatga cgctccggcc gggcgtgcgg gcctggctgc cggccgcgac ctccgccacc
     1201 ccggcggcgc gaccccggga agtccggact ctgcaaacgg gcgacacgct ggtgctcgag
     1261 gccggggttg tccgccgcac cctggccggg cgcagctacg tcatgtacgg attcaacggc
     1321 cagtatcccg gcccgttgtt gatcgtgggt cagcaggccg aaatcacggt gcggttccgg
     1381 aatcgcctgg atcaaccctc cacggtgcac tggcacgggg tccggctgga caaccgcttc
     1441 gacggggtgc ccggtctcac ccaggatccg gtggagccgg gtggagagtt cgtctaccag
     1501 ctgcgattcc cggatgccgg catctactgg taccaccccc acgtccggga ggacatccag
     1561 caggatctcg gtctctacgg caacatcctg gtccgatcgc cccgtcccga tgcctggtca
     1621 ccggcccacc gggaagaggt cctcctgctc gacgacctgc tggtggggga tgacggcctg
     1681 gtcccctatg gacaggacca ccccacccat gcgctcatgg ggcggttcgg gaacctgttc
     1741 ctggtgaacg gtgagccggg ctggcgcggt accgcccgac cgggggagat cgtgcggttc
     1801 tacttcacca acgcctccaa cacccgcacc ttcaacctgt cgttccccgg cgcccgaatg
     1861 aaactggccg ggtccgatct gggtccgttc cagcgggagg agtgggtcga aagcgtggtg
     1921 ctgggtccag ccgagcgcta cgtggtgcag gtacggttcg accggcccgg ccgggtggtg
     1981 ctgcagaacc aggtgcgggc catcgaccat ctattcggcc ggtacttcag cgaagccgat
     2041 acgctgggcg taatccaggt ggagggcgag ccagccggcc cgttgagcgg ccatgatcgg
     2101 ctccgggtcg atagcgccac tacccgggaa gtccgcgagg cagtggaggg gtcgaagcg
//
LOCUS       DASWKS010000235         5762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2344959, whole genome shotgun sequence.
ACCESSION   DASWKS010000235 DASWKS010000000
VERSION     DASWKS010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5762
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2344959"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..764
                     /locus_tag="VGA78_06875"
     CDS             <1..764
                     /locus_tag="VGA78_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893629.1"
                     /translation="DITGEIAVFESLAARDSDARARGVVLLPGVGFDVVPTDCLALHL
                     KQRLPDATHLWLAFQTRGGISRGTALTSLEGAGGGGRVRRDGRLTTVPPAWKTRMVDF
                     GKGPRLTVTIPWGDVATSWYSTGIPNVEVYVAAHPAAVRSLRLSRWLAPLLALPPVKA
                     LLVRGVRRREPGPSDQARATGFSVVVGEVRNDGGQTARARFTGPEAYTLTMHSALNAV
                     TRVLDGGVGAGFQTPAKAFGPNFALEIAGTSREEL"
     gene            764..2347
                     /locus_tag="VGA78_06880"
     CDS             764..2347
                     /locus_tag="VGA78_06880"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEX9893630.1"
                     /translation="MNRLLGILLLVLAGDATAQERFDLLITGGTILDGTGAPGFTGDV
                     AIRNGRILQISRDRLSAANAGRVIDASGLVVAPGFIDLHAHIEGLSRMPDAESHVRQG
                     VTLAVGGPDGGGPSPFGPYLSRLDSLPLGMNVAFMTGHNTIRRAVLGMADRKPSPEEL
                     ARMQQMVAAAMGEGAFGLSTGLFYLPGTFAKTDEVIALSKVAADSGGFYTSHLRKEGL
                     GLLDGVAEAIEIGRQAGIPVVLTHHKAIGPAMWGKTAVTLAMIDSARLAGIDVMADQY
                     PYTATSTGLGALVPPWASEGGDSAFARRERDPVLRDSLVRGIVFNLEHDRGGGDLRRV
                     QFAHVTWNRTLEGRTLHDWVVEQQLEPTTTNGANLVIEGMLKGGASMVYHVLDEGDVE
                     RIMRHPMVAIASDGGLSRPGVGVPHPRAYGTFPRVLGVYARERQVLPLEEAVRKMTSL
                     PAARLGLADRGWLAQGLVADITIFDPTTVKDLATFQSPHQYPVGIPYVIVNGVPVVDA
                     GVFTPNRPGKVIRRPARRG"
     gene            2392..3150
                     /locus_tag="VGA78_06885"
     CDS             2392..3150
                     /locus_tag="VGA78_06885"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9893631.1"
                     /translation="MTPPFKDLFSRDSAAYAEFRPRYPAELFQWLASLTHRRDLVWDA
                     GTGNGQAAVALAEQFQRVVATDPSERQLAEATMHPRVEYRRAGEESGLAAGAVDLVTV
                     AQALHWFDRPRFWVDVKRILRPGGVLAVWCYQLQRVSPAIDRVIGEFYHETIGPYWPS
                     NRKLVDAGYRDIGFPFEEITAPTFSMTAEWSLAHELGYLGTWSAVAKAREATGRDPVA
                     ELGPALERVWPPHEIHRVEWPVSLRVGRTASTEQ"
     gene            3249..4589
                     /locus_tag="VGA78_06890"
     CDS             3249..4589
                     /locus_tag="VGA78_06890"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893632.1"
                     /translation="MRFTLNCAIALVAAFPVSGAAQEQVTAFTNVTVIPMDSDRFLAG
                     HTVVVRGQRIVEVGPSSRVKPPAGASVIDGSGKWLMPGMAEMHGHIPPGNAPDAMIEK
                     VLAYYALNGVTTVRGMLGHARHLPYREKANRGEILSPTIWTTGPSLNGNSIPTVEAAI
                     KAVTDQKAAGYDLMKIHPGITRTVYDSMAATAKRLGIRFAGHVPLDVGIRRALEHRQW
                     TIDHVDGYIEGLATEGAQSAFFAFNLVDRADESRLPALVAASKASGAWIVPTQSLFES
                     MLGGKSADELAAMPEMRFWPDSVVSQWKQATNGNRNQLGVTPETARKYLELRRRVMQA
                     LYQGGVPFLLGSDAPQWWNVPGFSILREMEAMAKAGFTPYQIYESGSRNVARHFNAEN
                     EFGTVANGKRADLVLLDANPLDNVSNWGRRAGVMVRGKWYDAAEIQRRLEQLSH"
     gene            complement(4586..5143)
                     /locus_tag="VGA78_06895"
     CDS             complement(4586..5143)
                     /locus_tag="VGA78_06895"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9893633.1"
                     /translation="MAGTTRQDLQQQALLDRLAMLRDRVSASRSHVTPEDLKRVPPAG
                     GWSIGQVFEHLCVADDSYLAPMRELIGNAKPDPRAATATWRPSIMGNLLVRSFRSPRK
                     MPTPKLYRPSPSPRPAVIEAYLERLAQTEELLQRSRQVRWQQIRLGSPVTRLIRLNLG
                     DCFEILVTHTERHLAQVDRIKQSLR"
     gene            complement(5147..5647)
                     /locus_tag="VGA78_06900"
     CDS             complement(5147..5647)
                     /locus_tag="VGA78_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9893634.1"
                     /translation="MYRRIDDFLADWEQESQATLSVLRNLTNVSLDQRVSPDGRTLAR
                     LAWHLAQSLHMATEAGLPGVKGPGDGDPVPDKAQALVDAYGEAAGSLADAVRAGWNDA
                     ALPEEVPMYGDQWAKGRVLSIIIRHEAHHRGQMTVLMRQAGLKVPGVYGPAREEWAAM
                     GMEPQD"
BASE COUNT          944 a         1865 c         1958 g          995 t
ORIGIN      
        1 tcgacatcac cggcgagatt gcggtgttcg agtcgctagc cgcacgggac tcggatgcaa
       61 gagcccgcgg ggtcgtcttg cttcccggag tcggcttcga tgtcgtcccc accgactgtc
      121 tggcgttgca tctgaaacag cggctgcccg atgcaactca tctctggctg gcctttcaga
      181 cccggggagg gatctcccgt ggcaccgcgc tgacttcgct ggaaggggcc ggcgggggcg
      241 gccgggtccg gagggacggc cggctcacca ccgtgcctcc tgcgtggaag acccgcatgg
      301 tcgacttcgg gaaggggccc cgcctgacgg tcacgattcc gtggggcgac gtcgcaacct
      361 cctggtacag caccggcatc cccaacgtcg aggtgtacgt tgccgcccac ccggccgcgg
      421 tccgatcgct tcgtctgtcg cgctggctgg ctccgctgct ggcccttccg ccggtgaagg
      481 cgctgctggt ccgaggggta cggcgccggg agcccgggcc ttcggatcaa gcgcgggcga
      541 ccggcttttc ggtcgtggtg ggcgaagtgc gaaacgacgg aggacagacc gcccgagccc
      601 gcttcacggg tccggaggca tacaccctta ccatgcactc ggccctgaat gccgtgactc
      661 gcgtgctgga cggcggggtc ggggctggct ttcaaacacc ggccaaggct ttcgggccca
      721 acttcgccct cgagatcgcc ggcaccagcc gcgaggagct ttgatgaacc gcctactcgg
      781 aattctcctg ttggtcctgg cgggcgatgc gaccgcgcag gaacgattcg acctgctgat
      841 aaccggtggc accattctcg atggtaccgg cgctcccggg ttcaccggcg atgtagcgat
      901 ccggaatggg cggatccttc agatctcccg tgatcgactg tcagccgcga atgccggccg
      961 ggtgatcgac gcgagcggcc tggtagtcgc gccggggttc attgatctcc acgcgcacat
     1021 cgaggggctg tcgcgcatgc ccgacgcgga aagccacgtg cgccaggggg tcacgctcgc
     1081 cgtgggcggt cccgatggcg gcgggccctc tcctttcggc ccctacctga gccggctcga
     1141 ttcgctgccg ctggggatga acgtggcctt catgaccggt cataacacca tccggcgcgc
     1201 ggtgctggga atggccgacc gcaaaccgag cccggaggag ctggcgcgga tgcagcagat
     1261 ggtcgcggcc gccatgggcg agggcgcctt cggcctgtcg accgggctct tctacctccc
     1321 gggtaccttc gcaaagaccg acgaggtgat cgcgctctcg aaggtggcgg cggattcggg
     1381 cggcttttac acctctcacc ttcgcaagga aggattgggg ctgctcgacg gcgtggccga
     1441 ggccatcgag atcggacgcc aggcaggcat cccggtggta ctgacgcacc acaaggcgat
     1501 cggtcccgcc atgtggggaa aaaccgcagt gacgctcgcg atgatcgact ccgcccgcct
     1561 ggccggcatc gatgtcatgg ccgatcagta tccctacact gccacctcga ccggactggg
     1621 tgccctggtc ccgccctggg ccagcgaagg cggcgacagc gccttcgccc gccgcgaacg
     1681 cgatccggtt ctccgggaca gtctggtgcg cggcatcgtg ttcaacctcg agcacgatcg
     1741 cggcggcggg gatctgcggc gggtgcaatt cgcccacgtg acatggaacc gaaccctgga
     1801 aggccggacc ctccacgatt gggtggtgga acaacagctg gagccgacta ccacgaacgg
     1861 agccaacctg gtgatcgagg ggatgctgaa gggcggtgcc agcatggtgt accacgtgct
     1921 ggatgaaggc gacgtcgaac ggatcatgcg gcatccgatg gttgccatcg cctctgatgg
     1981 cgggttgagc cgccccggag tcggcgtgcc ccatccccgg gcctacggca cgttcccccg
     2041 ggtgctcggg gtctatgccc gcgagcggca ggtgctgccg ctcgaggagg cagtgcggaa
     2101 gatgacgtcg ttgccggctg cccggctggg gttggccgat cgcggctggc tggcccaggg
     2161 gctggtggcc gacatcacca tcttcgatcc caccaccgtg aaagacctgg cgacattcca
     2221 gtcgcctcac cagtacccgg tggggattcc ctacgtgatc gtcaacgggg tccccgtggt
     2281 ggacgcgggc gtcttcacgc ctaatcgtcc gggcaaagtc atccgccggc cggcccgtcg
     2341 cgggtgacgg cgcttcgctc aggatgacgg cgcttcgcct aggatgaccg cgtgacccca
     2401 cccttcaagg acctgttctc gagagattcg gctgcatacg ccgaatttcg gccccggtac
     2461 ccggcggagc tgttccagtg gctggcttcg ctcacccacc ggcgagatct ggtctgggat
     2521 gcgggcactg gtaacggcca ggcggccgta gctctcgcgg aacagttcca gcgcgtggtg
     2581 gccaccgatc cgagcgagcg gcagctggcc gaggcgacca tgcatccgcg ggtcgagtac
     2641 cgccgcgccg gagaggagag cggcctggcg gctggtgcgg tcgatctcgt caccgtggcg
     2701 caggcactgc attggttcga tcggccgcga ttctgggttg acgtgaagcg gatcctgcgt
     2761 cctggcggag tactggccgt gtggtgctac caactgcagc gggtgtctcc cgccatcgac
     2821 cgcgtgatcg gggagttcta tcacgagacc atcggtccct attggccctc caatcgcaag
     2881 ctggtcgacg ctggatatcg ggacatcggg tttcccttcg aagagatcac tgctccgaca
     2941 ttctccatga ccgcggagtg gtcgctggcg cacgagttgg gttacctggg aacctggtcg
     3001 gcggtggcga aagcccgaga ggctaccggc cgcgatccag tcgctgaact cggcccggcc
     3061 ctcgagcggg tctggccgcc gcatgagata catcgggttg aatggccggt gtcgctccgg
     3121 gtggggagaa cagcaagtac tgagcaatga gtactgaata tgggttcctc cgacggcatg
     3181 aaacgcctgg ggctggaccg acgtagattc gacagccgaa tccggctcac tttccctgga
     3241 gctctcgcat gcgtttcacc ttgaactgcg ccatcgcttt ggttgcggcg ttcccggttt
     3301 ccggagctgc ccaggagcag gtcacggcct tcaccaacgt caccgtcatc ccgatggaca
     3361 gcgaccgctt cctcgccggc cacaccgtcg tggtccgggg gcagcggatc gtggaggtgg
     3421 gtccttccag ccgagtgaag cctccggccg gggcaagtgt gatcgacggg agcggcaaat
     3481 ggctgatgcc ggggatggcc gagatgcacg gccacattcc gcccgggaac gcgcccgatg
     3541 cgatgatcga gaaagtgttg gcgtactacg ccctcaatgg tgtgaccacg gtgcgcggga
     3601 tgctgggtca cgcccgccat ctgccctacc gggagaaggc caatcggggt gaaatcctga
     3661 gtcccacgat ctggaccacc ggaccgtccc tcaacggcaa cagcatcccg acggtcgagg
     3721 cggcaatcaa agcagtgacc gatcagaagg cggccggtta cgacctgatg aagatccatc
     3781 ctgggatcac ccgcaccgtc tacgattcca tggcggccac cgccaagcgg ctcgggatcc
     3841 ggtttgccgg gcacgtcccg ctcgacgtcg gcatccgccg ggcgctggag caccggcaat
     3901 ggaccatcga ccacgtcgac ggctacatcg aaggcctggc gaccgaaggg gcccaatcgg
     3961 ctttcttcgc cttcaacctg gtggatcggg cggatgaatc gaggctgccg gcgctggtgg
     4021 cggcgtccaa ggcctccggc gcctggatcg tgccgaccca gagtctgttc gagtcgatgc
     4081 tgggcgggaa gtcggcggat gagcttgcag cgatgccgga gatgcgattc tggcctgata
     4141 gcgttgtgag ccagtggaag caggcgacca acggcaatcg caaccaattg ggcgtgaccc
     4201 cggagacggc gcgcaaatac ctcgagctcc gccgccgggt catgcaggcg ctataccagg
     4261 gtggggtgcc gttcctgctg ggctccgacg cgccccagtg gtggaacgtg cccgggttct
     4321 ccatcctgcg ggagatggag gcgatggcca aggcgggctt caccccgtat cagatctacg
     4381 agagcgggtc ccgcaacgtc gcccgtcact tcaacgccga gaacgaattc ggcacggtgg
     4441 ccaacggaaa gcgggcggac ctggtgttgc tcgacgccaa tccgctcgac aatgtctcca
     4501 actggggccg gcgggccggg gtgatggtgc gtgggaagtg gtacgacgcg gcggaaatcc
     4561 agcggaggct ggaacaactc agtcactagc gaagcgactg ttttatccgg tcgacctgcg
     4621 ccaggtgccg ctcggtgtgg gtgacgagga tctcgaagca gtcgcccaga ttgagccgga
     4681 tcaggcgagt cactggtgac cccagccgaa tctgctgcca ccggacctgg cgggaccgct
     4741 gcagcaactc ttcggtctga gcgagacgct cgaggtaggc ttcgatcacc gcgggccggg
     4801 gcgagggcga agggcgatac agctttggcg tgggcatctt ccgcggggat cggaacgaac
     4861 gcaccaggag attgcccatg atactcggcc gccaggtggc ggttgcggcc ctggggtcgg
     4921 gtttggcgtt cccgatcagc tcccgcatcg gagccagata actgtcgtcg gccacacaga
     4981 gatgctcgaa cacctggccg atgctccagc caccggcggg tggcacccgc ttcaggtcct
     5041 ccggagtcac gtggctgcgg gacgcgctca cgcggtcccg gagcatcgcg agccggtcca
     5101 gtagagcctg ctgctgcaga tcctggcgcg tggtgcctgc catcggtcaa tcctgcggct
     5161 ccatccccat cgcggcccat tcctccctgg ctggcccata gactcccggc actttgagac
     5221 ccgcctgccg catcagcacc gtcatctgac cccgatggtg ggcttcatgc cggatgatga
     5281 tcgacagcac tctccccttg gcccactggt cgccatacat gggaacctcc tccggcaggg
     5341 cggcgtcgtt ccaccccgcc ctgactgcgt ctgcgagcga gccggccgct tcgccgtaag
     5401 cgtcgaccag ggcttgcgcc ttgtcgggaa ccgggtcgcc gtcgccgggg cccttcacgc
     5461 ccggcagacc agcctcggtg gccatatgaa ggctttgcgc taagtgccag gccagccggg
     5521 ccagggttct gccgtcgggt gagacccgct gatcgaggga gacattcgtc aggttgcgca
     5581 ggaccgatag ggtcgcctgg ctctcctgct cccagtccgc aaggaaatcg tcgatccgtc
     5641 ggtacattgc agggggctcc gttttcgggc gggagtaaga aactaccggc ctgcgtcgcg
     5701 ggacgcgagt taccagaact accaccccca gggaaccatg caccctcgcc tgcattcgat
     5761 cg
//
LOCUS       DASWKS010000236         3427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_845848, whole genome shotgun sequence.
ACCESSION   DASWKS010000236 DASWKS010000000
VERSION     DASWKS010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_845848"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2004
                     /locus_tag="VGA78_06905"
     CDS             <1..2004
                     /locus_tag="VGA78_06905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893635.1"
                     /translation="TAKRPGAVYGASLLGAGLGTVTAVASLWILSPERALAAAALLAA
                     LGAGFAATHADRPALVRGVALMPAAAAIVFLARPPWQLHLLPYKALPQLLAFPNARVT
                     AEHTSPVGWVTAVDAPAFRYAPGLSLAYRGAFPRQTALLVDGELAGALSAWDSVEATL
                     LEWQPSALPYVLEARDRVLVIGGGSHEVANAVRHGASSVTAVELHPALARLARAGPMP
                     RSRSGASVTWAIGDARAYAARTAERFDLITLGPLAAGAPGPGTRALAEDYDHTVEAYA
                     RYLELLDDGGLLAMTGWITDPPRGNLRMVLTAAEALRRVAPAGLARGMVVVRSWATVT
                     TLVKPQGFTEAELTALADWAASRWFDLDWRPGMTAPNTRFNFVDRPVLFEAARAAVQS
                     RDGAERLARAYPFDVRPATDARPYPNHFVGPRALRRFLAGGRGEWLPFAEWGYIALLA
                     TLAQSTLLALGLLLVPLLVGRRRTSRTDPHPAGGSRVRLFGYFAAIGMGYLAAEIGAM
                     QQLTLLLGHPVYAVAAVLAVLLVASGIGALISDRIRPSAWPALLLVLVLAGLAGVLLP
                     AAHWLQSAPLSARAALALLLLAPVALVMGMPFPLGLRALARSDPARVAWAWAANGFTS
                     VVTAPLAALVALEAGTRMVFLVAAAAYGVAAGCLGPKGDRREE"
     gene            complement(2059..2460)
                     /locus_tag="VGA78_06910"
     CDS             complement(2059..2460)
                     /locus_tag="VGA78_06910"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893636.1"
                     /translation="MATTTESVLQAKGIAPSLTVDDLDRSIRFYEGLGFALEDRWEDG
                     GKLLGVMLRAGDAHLGLSQDDWKKGKNRVKGLGLRLWISTNQDTDELAKRAKAAGIIL
                     TREPYDEWGSHAFDVIDPDGFLVTISKDSPK"
     gene            complement(2592..3329)
                     /locus_tag="VGA78_06915"
     CDS             complement(2592..3329)
                     /locus_tag="VGA78_06915"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intradiol ring-cleavage dioxygenase"
                     /protein_id="HEX9893637.1"
                     /translation="MLNDDTPVGRVLTRREVLASLGAAVVLPRYLGGRTLLLPDGTRI
                     PACVVRPAQTEGPYFLDVQLDRPDIRSDPPDGKVSSGTPLDLGFQVSRLTGNSCAPLA
                     GVVVDVWQCDALGVYSGVKDQGGLFDTTGRKFLRGHQVTDTQGKVRFTTVYPGWYPGR
                     TVHIHFKLRTNPAGARGEEFTSQLYFDDAFSDQIFAQAPYAGRTGRRTRNSGDGIFRN
                     GGSELMLDVSRQGNGLTGTFEVALRNS"
BASE COUNT          468 a         1173 c         1187 g          599 t
ORIGIN      
        1 accgcgaaac gtccgggagc ggtctacggc gccagcctgt taggcgcggg actgggaacg
       61 gttactgccg tggcgtcgct ctggatcctg agcccggaac gcgcgctggc ggcggccgcg
      121 ctgctcgcag cccttggcgc cgggttcgcc gccacccatg ccgaccgccc ggcgctggtc
      181 cgcggcgtag ccctgatgcc ggccgccgct gccatcgtct tcctggcgcg ccccccgtgg
      241 caactgcacc tgctgcccta caaggccctg ccccagctgt tggcgttccc gaacgcccgg
      301 gtcacggctg agcacaccag cccggtgggt tgggtaacgg cggtagacgc ccccgccttt
      361 cgctacgcgc caggcctctc gctggcgtac cggggtgcct tcccccggca gaccgcgctg
      421 ctggtcgatg gggagctggc gggcgcgctc tcagcctggg actcggttga agcgaccctg
      481 ctcgagtggc aaccctccgc cctgccctac gtgctggaag caagagatcg cgtgctggtg
      541 atcggcggcg ggtcgcacga ggtggcgaac gcggtgcggc acggtgcgtc gtccgtcacg
      601 gcggtcgagt tgcaccccgc cctcgcccgt ctcgcccgcg ccggcccaat gcctcggagc
      661 cgcagcgggg cctccgtcac ctgggctatc ggtgacgcgc gggcctatgc cgcgcggacg
      721 gccgaacggt tcgaccttat cacgctgggg ccgctggcgg ccggcgcacc cggacccggt
      781 acccgcgccc tggccgaaga ctacgatcac acggtcgaag cgtacgcccg ctatctcgag
      841 ctgctcgacg acggcggcct gctggcgatg acgggatgga tcaccgatcc gccccgcggc
      901 aatctccgca tggtgctcac cgcggccgag gcgcttcgcc gggtggcgcc ggccggtctc
      961 gctcggggaa tggtggtggt tcggagctgg gccacggtca ccacgctggt caaaccgcag
     1021 ggcttcaccg aagccgagct gacggcgctg gccgattggg ccgcgtcacg ctggttcgac
     1081 ctggactggc gacccgggat gacggcgccg aacacccggt tcaacttcgt cgaccggccg
     1141 gtgctgttcg aggcggctcg cgctgccgtc cagtcacgcg acggggccga gcgcctggcc
     1201 cgggcgtacc ccttcgacgt ccggccggcg acggacgcgc gaccctaccc gaatcatttc
     1261 gtgggcccgc gcgcgctccg gcgattcctc gctggcggac ggggggaatg gctgcccttc
     1321 gcggagtggg gctatatcgc cctgctcgcg accctggccc agagcacgct gctcgcgctg
     1381 gggctgctgc tggttccgct gctggttggt cgcaggagga catcgaggac ggacccgcat
     1441 ccagcgggcg gatcgcgggt gcgcctgttt ggctatttcg ccgcgatcgg gatgggttac
     1501 ctcgcggcgg agatcggggc catgcagcag ctcaccctgt tgctggggca tccggtctat
     1561 gcggtggcgg cggtgctggc tgtgttactg gtggcttccg gtatcggggc gctcatctcc
     1621 gaccggatcc gaccttcggc ctggcctgcg ttgctgctgg tgttggtgct cgccgggttg
     1681 gccggggtgc tgctgcctgc cgcgcactgg cttcagtcgg ccccgctttc ggcgagagcc
     1741 gctctggccc tcttgctgct cgcaccggtg gcgctggtca tggggatgcc gtttccactc
     1801 gggcttcgcg cgctggcgcg atcggatccg gcccgggtgg cctgggcgtg ggccgccaac
     1861 gggttcacct cggtggtcac ggctccgctc gccgcgttgg tcgccctgga ggctggaacc
     1921 cggatggtgt tcctggtggc ggccgcggcg tatggggttg ccgccggctg cctcggcccg
     1981 aaaggagaca ggagagagga gtgaggagca aggaagctct cctctctcct tttctccacg
     2041 ctcctctctc ccggcccttt acttggggga atccttcgag atcgtcacca ggaacccatc
     2101 cggatcgatg acatcgaacg cgtggctgcc ccactcatcg tagggctcgc gggtgaggat
     2161 gatgcctgcc gccttggccc gtttggccag ctcgtcggtg tcctggttgg tcgaaatcca
     2221 gagccgcagg cccaaccctt tcacccggtt tttgcccttc ttccagtcgt cctggctcag
     2281 gccgaggtgg gcgtcgcccg cgcgcagcat cacgccgagc aacttgccgc catcctccca
     2341 gcggtcttcg agggcgaacc ccagaccttc atagaaccgg atgcttcgat ccagatcgtc
     2401 gacggtcagg ctcggcgcaa tgcctttggc ctgcaaaact gactcggtgg ttgtcgccat
     2461 ggcttcctct tgggtgtgtg ctgcggggcc ggcggagacc ccgatgtccc cggccggtga
     2521 ccgcggttcc actggttttt agccccgaaa tcgcacggcc gcaacgcatg gaatgtgagc
     2581 agccacggct cctagctgtt acgaagcgct acctcgaacg tccccgtgag gccgtttcct
     2641 tgccgcgaca catcgagcat cagctccgag ccgccattcc ggaaaatccc gtcgcccgag
     2701 ttgcgggtcc tccgcccggt gcgcccagca tacggggcct gggcgaagat ctgatccgaa
     2761 aaggcatcgt cgaagtagag ttgcgaggtg aattcttctc cccgggcgcc ggccgggttg
     2821 gtgcgcagct tgaagtgaat gtgcaccgtc cggccgggat accatccggg ataaaccgtg
     2881 gtgaaacgga ccttgccctg ggtatcggtg acctggtgcc cccgcaggaa cttccggccg
     2941 gtggtgtcga acagtccgcc ctggtctttg accccggaat agacccccag cgcgtcacac
     3001 tgccacacgt ccaccaccac ccccgccagg ggagcgcagg agttgcccgt caaccgggac
     3061 acctgaaagc ccaaatcgag cggcgtcccc gacgagacct taccgtccgg ggggtcggac
     3121 cggatgtccg gtcggtccag ctgcacgtcc aggaagtagg ggccctcggt ctgggccggc
     3181 cggacgacgc aggccgggat tcgggtgcca tcgggtagga gaagggttcg gccgccgaga
     3241 tacctgggaa gtaccaccgc ggcgccaagg gaggcgagaa cttcacggcg agtgaggact
     3301 cggccgaccg gggtgtcgtc gttcagcata cgagccgctt ggaagagggt acctcaccat
     3361 acggccccgg cggcaacctt acaagcggga gccgggttca gggatcgatc gtagcgtctg
     3421 cggcgcg
//
LOCUS       DASWKS010000237         5030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1214594, whole genome shotgun sequence.
ACCESSION   DASWKS010000237 DASWKS010000000
VERSION     DASWKS010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214594"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VGA78_06920"
     CDS             complement(<1..413)
                     /locus_tag="VGA78_06920"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HEX9893638.1"
                     /translation="MRRGTLLGSKGVEGGRRQSRAVAAVLAVFLLGLFLAPDSAWAWT
                     PGTHIWLGESILANLHLLPASVSDLLHAFPYDFLYGSIAPDISFAKRYVPPGRHSHFW
                     HVGQEVYADAPSDAMKAFGLGYLAHLSADTMAHNF"
     gene            complement(410..916)
                     /locus_tag="VGA78_06925"
     CDS             complement(410..916)
                     /locus_tag="VGA78_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893639.1"
                     /translation="MLPSLHSALAAVVQAAWVGPTVAISLVLIALGFGAVAVALVVVG
                     KNLVDLLQSLEKEVAELREELAPAIKSVQGLAEEGQGLANKVQQEIQDVVRTSQRIRF
                     DVERGMRRAKQRLSDLDALAEVMQEEIEETALDVAAKLRSVRRGLGVVSRLRRFVGGG
                     RRKRVREG"
     gene            988..2271
                     /gene="murA"
                     /locus_tag="VGA78_06930"
     CDS             988..2271
                     /gene="murA"
                     /locus_tag="VGA78_06930"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX9893640.1"
                     /translation="MPERFLVRGGKALSGTIRPAGNKNAALPILAATLLADGPVELSN
                     IPRIRDVEAMLALLAHLGCSVEWQGPNQVKVDARAAQSRPLDPELCARIRASILLAGP
                     LLARFGKVQLPPPGGDVIGRRRIDTHVLALEQLGARVEVGDRYEIEARRLTGCDIFLD
                     EPSVTGTENALMAAVMAEGRTVLRNAASEPHVQDLARALVSMGGEIDGIGTNTYVIHG
                     GRPLRGTSYEIGPDHIEIGSFIGLAAVTNGHIAIEGVRGEELRSILLGFERLGVCPRL
                     DGHTLYVDRDQERRVRPDLGEHIPKLEDGPWPAFPADVMSIALVTATQCEGLILIFEK
                     MFESRLFFVDKLIGMGARIVLCDPHRAVVSGPARLRGGAVESPDIRAGMAILLAALAA
                     EGESTINNIGQIDRGYERIDDRLRALGAELTRVTG"
     gene            2268..3053
                     /locus_tag="VGA78_06935"
     CDS             2268..3053
                     /locus_tag="VGA78_06935"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HEX9893641.1"
                     /translation="MTRQTELGGPASAGLIRELPVPGEIPRFEVPGWRDRYGVLAGIT
                     GRDADSPGFDLGLWTDQPVGAVMERWRRLRRAEPGFHATVLATQVHGTELAWHRDAYG
                     WLILDGFDGHATSRPGLLLTVTVADCIPVYLVDPVTRTIGLLHAGWRGTAAGILARGV
                     EQLLAHGASLEHLILHCGVGICGPCYEVGQDVMTGCGLVPTGNGPWHLDLRRVLLSQA
                     TAIGIRQGSSSEWCSAHHGTEFYSHRRSRGSDGRMVAYLGLLP"
     gene            3065..3415
                     /locus_tag="VGA78_06940"
     CDS             3065..3415
                     /locus_tag="VGA78_06940"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9893642.1"
                     /translation="MKRMVAVLFLGAGACFGNTDDSDGSAPVVVITSPTGTEVSGSVS
                     FAATVIDDFGVEEVEFFAGNISLLQDRLPPYAVQWATINFPDGPIQIRVIARDYSGNS
                     SQAAKTVTVNNAPD"
     gene            3569..4045
                     /gene="rimP"
                     /locus_tag="VGA78_06945"
     CDS             3569..4045
                     /gene="rimP"
                     /locus_tag="VGA78_06945"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEX9893643.1"
                     /translation="MTSPPDLSLRLRDEVARLGFELVDVRIGGPPHRRSVRLRIDRPG
                     SRPGAGVTSDDCALVSRALQAWFTSAEPRETVETMEVSSPGIERPIRWPEHWRRFVGS
                     RVRVRVAGLAGRPVATIQDVPDDQHVILDLERLGPRTLALDDIREATLVVDWPPGR"
     gene            4062..>5030
                     /gene="nusA"
                     /locus_tag="VGA78_06950"
     CDS             4062..>5030
                     /gene="nusA"
                     /locus_tag="VGA78_06950"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEX9893644.1"
                     /translation="MAGSTEMLAAFRELTSAKQLDRNELKALLEDGIHAALARKFGPT
                     VKFEMSVDELRGGIRVVRLRQVVETVEDPAWQISVEDARDVDAEFQLGDMLEEEVPFE
                     EFGRLAVQAAKQRIIQRVREGERNKIREEFGGKVGELLSGEIQQIERGKLVLILNRFR
                     EAEAIIPYREQNHREHFHQGDTIRAVLKRLEETPKGPRLILSRGDPLFVAALFKLEVP
                     EIAQQIVEIKAIAREVGSRTKVAVISRDDAIDPVGACVGLKGSRVQAVVNELNGERID
                     IVPWSPDPERFARLALAPARVARVFSDPESKTIQAVVDEDQLSLAIG"
BASE COUNT          801 a         1661 c         1740 g          828 t
ORIGIN      
        1 taaaagttgt gcgccatggt gtccgccgag agatgcgcca gatagcccag cccgaacgcc
       61 ttcatcgcgt cgctgggggc gtcggcgtac acctcctggc ccacgtgcca gaagtgcgag
      121 tgccgcccgg gcggtacgta gcgcttggcg aacgagatgt cgggtgcgat gctgccgtag
      181 agaaaatcgt acgggaatgc gtgcagcaga tcggagacgc tggcgggcag caggtggaga
      241 ttggcgagaa tgctttcgcc cagccagatg tgggtaccgg gagtccaggc ccaagcggag
      301 tccggcgcca ggaaaaggcc tagaagaaag acagccagga cggcggcgac tgccctcgac
      361 tgccttcgac ccccctcgac gcccttcgac cccaacaaag tcccccgcct catccctccc
      421 gcacccgctt ccttcgtcct ccgccgacga agcgccggag ccggctcacc acgcccaggc
      481 cgcggcgcac cgatcgcagc ttggcggcga cgtcgagtgc cgtctcttcg atctcctcct
      541 gcatgacctc ggcgagggca tccagatcgg acagccgctg cttggcccgg cgcatgcccc
      601 gctcgacgtc gaaccggatc cgctgactgg tccggaccac gtcctgaatc tcctgctgca
      661 ccttgttggc cagcccctgg ccttcctcgg ccagcccctg cacgctcttg atggccggcg
      721 ccagctcttc ccgcagctcg gcgacttcct tttccaggct ttgcagcaga tccaccaggt
      781 tcttgcctac cacgaccagc gcgaccgcca cggcgccgaa cccaagcgcg atcaggacca
      841 gggagatcgc gacggtgggg ccgacccagg cggcctgcac cacagcggcc agagccgaat
      901 ggagggacgg cagcatcggc tcaagaataa ctgcggcccc ggcatggcgc ttgactccgc
      961 cccagcccgg ccgcgaggtt tgccgccatg ccggaacgat ttctggtccg cggcggcaag
     1021 gccctttcgg ggaccatccg acccgcgggc aacaagaacg ccgcgcttcc cattctggcg
     1081 gcgaccctcc tggctgacgg gccggtggag ctttccaaca ttccccgcat ccgcgacgtc
     1141 gaggcgatgc tggccttgct cgcgcacctg ggctgcagcg tggagtggca aggacccaac
     1201 caggtcaagg tggatgcccg ggccgcccag tcgcggccac tcgatccgga gctgtgtgcc
     1261 cggatccggg cctcgatcct gctggcgggt ccgctgcttg cccgcttcgg aaaggtgcag
     1321 ttgccccctc ccggcggcga cgtgatcggc cggcgccgga tcgacaccca cgtgctggcg
     1381 ctggaacagc tcggggcccg ggtggaagtg ggcgatcggt acgagatcga ggccagacgc
     1441 ctcaccggct gcgacatctt cctggacgag cccagcgtca ccggcaccga gaatgccctc
     1501 atggccgccg tgatggccga aggccgcacc gtgctccgca acgcggccag tgagccgcac
     1561 gtgcaggacc tggcccgggc cctggtgtcc atgggcggcg aaatcgacgg gatcggaacc
     1621 aatacgtatg tgatccacgg cgggcgtccc ttgcgaggga cgtcctatga aatcgggccc
     1681 gaccacatcg agatcggcag cttcatcggg ctggcggcgg tgaccaacgg ccacatcgcg
     1741 atcgaaggcg tccggggcga ggagctccgc tccatcctgc tgggcttcga gcggcttggc
     1801 gtgtgtcctc gtctggacgg gcacacgctg tacgtcgatc gcgatcagga gcgccgggtc
     1861 cggcccgacc tgggcgagca cattcccaag ctcgaggatg gtccctggcc ggcgtttccg
     1921 gcggacgtga tgtcgatcgc gctggtgacc gccacgcagt gcgaggggct catcctgatc
     1981 ttcgagaaga tgttcgaatc gcgcctcttc ttcgtggaca agctgatcgg catgggcgcg
     2041 cgcatcgtac tgtgcgatcc ccatcgggcg gtggtgtctg gcccggcccg gttgcggggc
     2101 ggggcggtgg agtcgcccga catccgggct ggcatggcca tcctgttggc cgcgctggcc
     2161 gccgagggcg agagcaccat caacaacatc ggtcagatcg atcgcggcta cgagcggatc
     2221 gatgaccggc tgcgagccct gggagccgaa ctcacccggg tgaccgggtg acccgtcaga
     2281 cggagctcgg cggtcccgcc agcgcggggc tgatccggga gctcccggtg ccgggcgaga
     2341 tcccccgctt cgaggtcccc gggtggcgcg accggtacgg cgtgctggcc ggcatcaccg
     2401 gtcgggacgc cgactcaccc ggattcgatc tcggcctctg gaccgatcag ccggtcggag
     2461 ccgtgatgga acgatggcgc cggctgcgcc gagccgagcc gggctttcac gcgacggtcc
     2521 tggccactca ggtccacggc accgagctgg cgtggcatcg ggacgcctat ggctggctga
     2581 tcctggacgg cttcgacgga cacgcgacct cccgtcccgg gctgctgctc acggtgacgg
     2641 tggcggactg tattccggtg tatctggtcg atccggtgac ccgcacgatt ggtctgctgc
     2701 acgcgggctg gcgcgggacc gccgccggga tcctggcccg aggagtggaa cagctgctgg
     2761 cccacggagc ctcgctcgaa cacttgatcc tgcactgcgg cgtcggcatt tgcggaccct
     2821 gctatgaggt cgggcaggat gtcatgaccg gttgcggcct cgtcccgacc ggaaacgggc
     2881 cgtggcacct ggatctgcgc cgggttctgc tctcgcaagc gacggccatc gggatccggc
     2941 aaggctccag ctcggaatgg tgctcggccc atcatgggac cgagttctac agccatcgcc
     3001 gctcccgggg gagcgacggc aggatggttg cctacctggg gctccttccg taagctttcg
     3061 tcatatgaag cgtatggttg cggtactgtt ccttggcgcg ggggcgtgct tcgggaacac
     3121 cgacgattcc gatggctcgg ctccggtggt ggtgatcacc tctcccacgg ggaccgaggt
     3181 ctccggctcc gtcagcttcg cagccacggt gatcgacgac ttcggggtcg aggaggtcga
     3241 gttcttcgcc ggaaacatta gtctgctcca ggaccggttg ccgccgtatg ccgtgcagtg
     3301 ggccaccatc aacttcccgg acgggccgat ccagatccgg gtcatcgccc gggattattc
     3361 cggcaacagc tcgcaggctg ccaagacggt gacggtcaac aacgccccag actgaccgac
     3421 tgaagcgacc gacagaccga ctgaccgact gtccgactgg atgttgacgt gccctggcgg
     3481 atgacgtaga attggatgcc tttggggaac gtggtgggct cgccgacgat gtggggtgtt
     3541 cccccacatt ttttttggac ccccctccat gacgtcgccc ccggatctct cgctacggct
     3601 tcgcgatgag gttgcccggt tgggcttcga gctcgtggat gtgcgcatcg gcggcccccc
     3661 gcaccggcgc agcgtccgcc ttcgcattga ccggccgggc agtcggcccg gtgccggtgt
     3721 cacctccgac gattgcgcgc tggtatcccg cgcgctgcag gcttggttca cctcggctga
     3781 gccgcgcgag acggtcgaga cgatggaggt gtcgtccccc gggatcgagc gaccgatccg
     3841 gtggccggag cattggcgcc gcttcgtggg ctcgcgggtc cgggtccggg tggccgggtt
     3901 ggcggggcgg ccggtagcca ccatccagga cgtgcccgac gatcagcacg tgatcctcga
     3961 cctcgaacgg ctgggtccgc ggaccttggc actggatgac atcagggaag cgacgctcgt
     4021 ggtggactgg ccaccggggc ggtaacgccg ggagacagga aatggcagga tcgacggaga
     4081 tgctcgccgc ttttcgtgag ctgaccagtg cgaaacaact cgaccgcaac gagctgaagg
     4141 cgctgctgga ggacggcatc cacgcggcgc tggcccgcaa gttcggcccc accgtcaagt
     4201 tcgagatgtc ggtggacgag ctgcggggcg gcatccgggt cgtgcggttg cggcaggtgg
     4261 ttgaaacggt ggaggacccg gcctggcaga tcagcgtcga ggacgcgcgt gacgtcgatg
     4321 ccgaattcca gctgggcgac atgctggaag aagaagtgcc gttcgaggag ttcggccggc
     4381 tggcggtgca ggccgccaag cagcgcatca tccagcgggt ccgcgagggc gagcgcaaca
     4441 agatccggga ggagttcggc ggcaaggtgg gcgagctgct ctcgggcgag atccagcaga
     4501 tcgagcgcgg caagctggtc ctcattctca accggttccg cgaggccgaa gccatcatcc
     4561 cgtatcggga gcagaatcac cgggagcact ttcaccaggg cgacaccatc cgcgccgtgc
     4621 tcaagcggct ggaagaaacc cccaagggcc cccggctgat cctgtcgcgg ggcgatcccc
     4681 tgttcgtcgc ggcgctcttc aagctggaag tgcccgagat cgcgcagcag atcgtcgaga
     4741 tcaaggccat cgcgcgggaa gtcggcagcc gcaccaaggt cgcggtgatt tcccgggacg
     4801 acgccatcga tccggtcggc gcttgcgtgg ggctcaaggg ctcgcgggtg caagcggtgg
     4861 tgaacgagct caacggcgaa cggatcgata tcgtgccctg gtcgcccgat ccggaacggt
     4921 ttgcccggct ggcccttgcg ccggcccggg tggcccgggt gttctccgat ccggagagca
     4981 agaccatcca ggcggtggtc gacgaagatc agttgtcgct ggccatcggc
//
LOCUS       DASWKS010000238        10362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1215502, whole genome shotgun sequence.
ACCESSION   DASWKS010000238 DASWKS010000000
VERSION     DASWKS010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10362
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215502"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1467
                     /locus_tag="VGA78_06955"
     CDS             <1..1467
                     /locus_tag="VGA78_06955"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX9893645.1"
                     /translation="AALLSRRLDVGWLHAIRKWTLLSWTFLSVGITLGMWWAYVELGW
                     GGYWAWDPVENASLLPWLTMTAFLHSVMIQEKRGMLKRWNMSLVVGTFMLSIFGTFIT
                     RSGVIASVHSFAQSNVGWFFLVFLVVIGFAGFALLYLRWPSLEPEAKLESLASREAAF
                     LFNNLVLVGIAFSVLWGTLFPILSEAVRGVKITVGPPFFNRVNIPLGLFLLLLTGVGP
                     LIAWRKASITNLKRQFVGPTSLSLFTGASLFALGVREFYALLSWTFAGFVLGTVVQEF
                     YRGVRARRRMYQEAIPVALAHLIDRNRRRYGGYLVHVGILVFFVAFAGSAFKVTKEVT
                     LSPGDTTQLKSPFGHTYTFTFLGVSQYSTLNRFVSAATLEVQRDGKPEGRLSSEKRQH
                     MNSLGENTFQPSTEVGIRSGLREDLYVVYAGSIAGTEKSNFAITINPLVWWVWAGGVI
                     LVIGGLLAMWPGGRATVPVPARSEAQAGFEARLVGTEA"
     gene            1467..2027
                     /locus_tag="VGA78_06960"
     CDS             1467..2027
                     /locus_tag="VGA78_06960"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HEX9893646.1"
                     /translation="MNRRRFLGLGAAALVFPRQTPSDADPLRDPSAAGRSRLPVGDLD
                     NSEMVKEVERRLKCTCPCNLDVFTCRTTDFSCEYSPAMHREVMDLVRDGKTSEQVITA
                     FIEKYGERVLMAPRPVGFNLAGYLVPGVLVSVAATALAVVLLRRHRIVEAAATGSGTA
                     AGPSPAERPSPEEMDRLKQALSEVAD"
     gene            2027..2524
                     /locus_tag="VGA78_06965"
     CDS             2027..2524
                     /locus_tag="VGA78_06965"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX9893647.1"
                     /translation="MAAEVIAALALGGLVLWMILSPLFRTGVAAPAFLEPLDPEETRR
                     GIALIALKEIDFDRATGKLSDQDYEGLKAKYTNEAVVAMREEEPSVDVVEALIAERVN
                     LLQSTGGAPAAVQLCPTCGLRPEPDARFCSSCGGPVASRADCRVCHAALDPGSRFCSA
                     CGVQV"
     gene            complement(3422..5179)
                     /locus_tag="VGA78_06970"
     CDS             complement(3422..5179)
                     /locus_tag="VGA78_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893648.1"
                     /translation="MRSAWRGFGVRGCLGAVVVLAACRGALVEPVEGPVTAETGDPPL
                     PKLVPPIIGGSDAVRQQVIRFFAPVIYQDIEDHSEQDLLTRITFDGNWRGTDNWENTY
                     LYPKRAYVYTSLIEDTNRYFLHYGLFWPRDWCSVTCTLGQDFHENDMEGLTLVVDKRF
                     IASGWPYGQVITMDTRSHNGISRYRNCDLAGGYPTYVTLRNGGTPPCMPFTSAYGATT
                     PAPRRAAVFVNAQSHAVRAYSAGDYPFAGGDGVIYFPTDGAAQVPASTSTITQAGYRI
                     QWMDSTETNAWTLWSQRRNAIVGTENTLFEYGGGLVGPHDVYYQKFFGCNDNCPSIFS
                     TRAKAPWGIAASGSERVGDWHNHPAYAWARQYAPSGTGGGYFNYTCLTESCRTQNGYV
                     HNIYWSDAPWASGGSSGGGGPTCGSCPKTTAGADVKGRGAEQRWDFDQLGDVSLSGDA
                     WFSVVQQVDEDWGYAGGRANALRIQGRGEVSLSFETLVDPQVIDRVVVRARRVKGTPI
                     GVIARWEHADPGAQGDDQESPLEQQYVSGRKWEMLQLDLIRNTAWKRLTKVKRFTLVF
                     SLDGGPADTIDLDFVILAP"
     gene            complement(5426..7162)
                     /locus_tag="VGA78_06975"
     CDS             complement(5426..7162)
                     /locus_tag="VGA78_06975"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893649.1"
                     /translation="MTSSPLDLPAVPVPVPRVGRQPHLWTVLTPQWRSVLARLRQNRS
                     PGRTLLFAVIGLGFWSAVFGISFRVLRYFRGVEEIGSLLAGKMLAMTLMAFGGILLLS
                     NLVTALSTFFLAKDLDMMVSAPVDWLRFYLAKLCETMIHSSWMVVLLAFPLLTAYGIV
                     YRGGPLFPFVALSALAPFLLLPSVVGVAATLLLVNIFPARRTRDVLSLVAAGAVAGVV
                     LLLRLMQPEQLARPEGFQNLIEFIAVLQTPSSAFLPSEWSAQVIMNWLLRVSDPLPIA
                     LLWTTAGALVVFGALLHLRLYPTGYSKAQEGANSYLRGRGWDRIVRGTLGWLPVTRRE
                     FLLKDLKLFFRDTTQWSQLILLAVLLLVYVFNIRALPLFSGEKVPFTLVTLVVFLNQG
                     LAGFVLAAIAARFIFPAVSLEGRQLWLLRSSPLDQRTLLWSKYWIGTLPLLVLALVIT
                     VITNTILQASAFMMAVSIGSTICFTVAAAAMALAMGVYYPQFETENAAQIPTSFGGLL
                     FMMASVTLLGAVITIEAAPVAAYLRARQTGAPFTATRDLLFALGLVLFLTGGAAVASI
                     RLALRRLQELEL"
     gene            complement(7143..7901)
                     /locus_tag="VGA78_06980"
     CDS             complement(7143..7901)
                     /locus_tag="VGA78_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9893650.1"
                     /translation="MIRLTDLTKRYGSFTAVDGLSLEIPAGTMFGFLGPNGAGKTTTL
                     RMIAGILKPTSGVVEIGGEDIQRNPVGAKARLGYIPDRPFVYDKLTGAEFLRFTAALF
                     GQEGPPVENRINELLELFELTPWKDELTESYSHGMRQKLIISSALVHRPEVIVVDEPM
                     VGLDPRSGRLLKDLFRRFVERGGTVLMSTHTLEIAEGMCDRIAIVRGGKLLAAGTMAQ
                     LREQHAAGDATLEELFLKLTGGLSERELSDLFAA"
     gene            complement(7898..9358)
                     /locus_tag="VGA78_06985"
     CDS             complement(7898..9358)
                     /locus_tag="VGA78_06985"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX9893651.1"
                     /translation="MTWLVIRQISRPPEAFLEAAAARLAPSAAFYQILLNGVPMGNAG
                     ITLDTVFTGYRVTEVWSMDLAGPTRSHRHVYRSDAELSRSLKLQTQVVNLSEAGVPRI
                     LELQQGDSLVTLEERRPGGQSEAAQLGGRSITIAAGLVFRLAAEKRLERGASVSRTVA
                     LPMMKRSEVQSARVIGDAVMAVSDSAVWDSTRSDWVAVPAPGVTAWQVERTWGGMPMI
                     EWVDAQGRLLQRSWAFGLTLERSPFEVNYNRYQAALRGGRISLPQTITGARARTSFAG
                     APDTTIRELVIHVARLDGPAWPGSSQVFQGGRQAVSHDTVTVRRRGKPIPGSTQPDQA
                     LMQATGNRSAGEAYARALAAMPEGSDTLAHLVQWVSHSVRLVDDSSTTSVQNVAATRM
                     GGARGKVALLVEFARLAGKPARPVIGVDAGRPELPSHIWAEVWEADQWIAVDPVYGHV
                     PAAASLLRVSEGPDSRPLALVPLVASLRTTILAVRR"
     gene            complement(9406..10203)
                     /locus_tag="VGA78_06990"
     CDS             complement(9406..10203)
                     /locus_tag="VGA78_06990"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893652.1"
                     /translation="MRMFNRRAGHGMDDAALGFDPPALEGDLRDPGPDEGPALRPFTV
                     DMPGPKPSLPEPLVDEPEPVRVLNRVHDLEQLGRRLDAIQVLRQAVQDAPAEVDLLLH
                     LARLLEAAGEGEEALETLDAGLQATGGAVALRVQRGAFLGRLGRYTEAEADLRTAIGT
                     APDGLDALLHLGLSYLRRGKQSDAIPLLQRAAELAPDHPETVFLLGEAWYHAGQLERA
                     ERTLLRATELAPNDSRAYKLLGRLLDRIGRTEEAMVMHRKAREAGMS"
BASE COUNT         1797 a         3480 c         3361 g         1724 t
ORIGIN      
        1 gcggccctgc tgtcccgccg gttggacgtg ggttggctcc acgcgatccg caagtggacc
       61 ctgctgtcct ggacgttcct gtcggtgggg atcacgctgg ggatgtggtg ggcctacgtg
      121 gagctgggct ggggcggcta ctgggcctgg gacccggtgg agaacgcgag cctgctgcct
      181 tggctcacca tgacggcgtt tctccattcg gtgatgatcc aggaaaagcg gggtatgctc
      241 aagcgctgga acatgtcgct ggtggtcggg accttcatgc tctcgatctt cggaaccttc
      301 attacccgat ccggcgtgat cgccagcgtc cacagcttcg cccagtcgaa cgtgggctgg
      361 tttttcctgg tcttcctggt ggtgatcggg ttcgccggct tcgcgctgct gtatctccgg
      421 tggcccagcc tggagcccga agccaaactc gaatcgctcg ccagccgcga ggcggcgttc
      481 ctgttcaaca acctggtgct ggtcgggatc gcgttctcgg tgttgtgggg gacgctgttc
      541 cccattctgt ccgaggcggt gcggggcgtg aagatcacgg tgggtccccc gttcttcaac
      601 cgggtgaaca tccctctggg gctctttctg ctcctcctga ccggagtggg gcccctcatc
      661 gcctggcgca aggcttcgat caccaatctc aagcgccagt tcgtcgggcc taccagcctc
      721 agtctgttca ccggcgcgag cctgttcgcg ctgggcgtgc gcgaattcta cgcgctgctc
      781 tcctggacct tcgccggctt tgtgctcggg accgtggtcc aggagttcta ccggggagtg
      841 agagcccgcc ggcgtatgta tcaggaggcg atcccggtgg cgttggccca cctgatcgat
      901 cgcaatcggc gacgctacgg cggctacctg gtgcacgtgg gaatcctggt gttcttcgtg
      961 gccttcgccg ggtcggcctt caaggtgacc aaagaggtga ccctctcgcc cggcgatacc
     1021 actcagctca agagcccctt cggccacacc tacacattca ccttcctggg cgtctcgcag
     1081 tacagcaccc tcaaccgctt cgtgtccgcc gcgacgctgg aggtgcagcg cgatggcaag
     1141 ccggaaggcc ggctttcctc cgagaagcga cagcacatga acagcctggg ggagaacacc
     1201 ttccaaccct cgaccgaagt cgggatccgg agcggtctgc gggaagatct ctacgtggtg
     1261 tacgccggtt ccatcgccgg gaccgagaaa tccaatttcg ccatcaccat caatcccctg
     1321 gtgtggtggg tctgggccgg cggcgtgatt ctggtcatag ggggactgct ggccatgtgg
     1381 ccgggtggtc gtgcgacggt gccggtgccg gcccggagcg aagcccaggc cggcttcgag
     1441 gccaggttgg tggggaccga agcgtgatga accggcgccg ctttctcggg ctgggcgcgg
     1501 ccgctctggt gttcccccgg cagacgccgt ccgacgccga ccccctgcgg gacccgtccg
     1561 cggccggcag gtcgcggttg cccgtgggcg atctcgacaa cagcgaaatg gtcaaggagg
     1621 tcgagcgccg cctcaagtgc acctgtccct gtaatctcga cgtcttcacc tgccgcacca
     1681 ctgatttctc ctgcgagtat tctccggcca tgcaccggga agtcatggac ctggtgcggg
     1741 atggcaagac ctcggaacag gtgattacgg ccttcatcga gaaatacggc gagcgggtgc
     1801 tgatggcgcc ccggccggtg gggttcaacc tcgcgggcta cctggttccg ggtgtgctgg
     1861 tgagcgtcgc ggctacggcg ctggccgtgg tcctgctgcg gcggcatcgg atagttgaag
     1921 cggcggcaac cggttctggg acggcggccg ggccgtcccc ggccgagagg cccagcccgg
     1981 aggagatgga ccgtttgaag caggctctgt ctgaggtggc cgactgatgg ccgccgaagt
     2041 catcgccgcc ctggccctcg gcgggctggt cctatggatg attctttcgc ccctgttccg
     2101 gaccggagtc gccgccccgg cattcctgga gccgctcgat cccgaggaga ccaggcgagg
     2161 catcgcactc attgctctca aggagatcga cttcgatcgg gccaccggga agctgtccga
     2221 tcaggactac gaggggctca aggccaagta caccaatgaa gccgtcgtgg cgatgcgaga
     2281 ggaagagccg agcgtggacg tggtggaagc gttgatcgcc gaacgagtaa acctgcttca
     2341 gtcgaccggc ggcgccccgg ctgcagtgca gctgtgcccc acgtgcgggc tgcgtcccga
     2401 gccggatgcc aggttctgtt ccagctgcgg tggcccggtg gcgtccaggg cggactgtcg
     2461 ggtgtgccac gcagccctgg acccaggcag ccggttctgc tcggcttgcg gggtgcaggt
     2521 gtagtcagga cggttggcgt cggcattcgg tcgccaacaa caccagagcc gcgcccgatt
     2581 ggacgcggct ctttctgcgg atgagaccct gactgatatc ggtgggagaa cggggccgcg
     2641 ggcccgttcg cttcgctcgc catcccccga tggtatccgc ggtgctatcc ccgtctccct
     2701 ctaccctaag ccggctcgaa gtcccttcat cccccggacg acaatatcgg aagattcggc
     2761 acggacacaa ctatcacaag taatagggta ccccgggatc cggcagttaa cccgtttcag
     2821 ccaaacacgt tgcttcaccg ggtcgcgacc ctggccgtca gtggcggacc ggaacccacc
     2881 gggggatcaa cgcacctaca cccactccaa tgagcgcgcc gctcaaccca ccgaccagcc
     2941 cgatgaggcc aacctccctc gtgctgacct caacgtcgtc cccgtccagc aggagcagtc
     3001 cccagaggat tcccgcccct gtggctgacc cgatgattgc ccccaagccg gcgtgtgagc
     3061 cactacgcat ttcaacaaac gcccccggca acagagtcag ggctcgggat tgatccgtgg
     3121 cggctgggca aagcgaccct ctgcacggat taagaagcaa cgttccggag tccggccttc
     3181 cctggaaacg cccctgcgcc accatcccgt tctgccggac ccggagggtg caacatccca
     3241 ggccgatcga atcgagggac ggcacaaacc ggggagtgtc ctgggcggtg gcgccccccg
     3301 cccccaggac gaaggtcacc ccaaccaggc acgcggctcg tcgaaccacc agcaccattc
     3361 ccatggtgat ctcgccaaaa aagtagggtt gtggactcaa ccaagtctga aatgcggcgt
     3421 ctcacggcgc caggatcacg aaatccaggt cgatagtatc ggccggcccg ccatcgagcg
     3481 agaaaaccag ggtgaatcgc ttcaccttcg tcagacgctt ccaggccgtg ttccggatca
     3541 ggtccagctg gagcatctcc cactttcggc cggacacgta ctgctgctcc aggggagatt
     3601 cttgatcgtc cccctgcgcc cccggatcag cgtgctccca ccgggcgatc acgccgatcg
     3661 gcgttccctt gacccgacga gcccgcacca ccacccggtc gatcacctgc gggtcgacca
     3721 gggtttcgaa gctcagtgag acctcccccc ggccctggat cctgagtgcg ttcgcacggc
     3781 caccggcata gccccaatcc tcgtcaacct gctgcaccac gctgaaccag gcatcgccgc
     3841 tcaggctcac gtcccccagc tgatcgaagt cccagcgctg ttccgcaccc cgtcccttga
     3901 cgtccgcgcc ggcggtggtc ttggggcagc tgccgcaggt tggaccgccg cctccgctgg
     3961 agccacccga ggcccagggc gcatcgctcc aatagatgtt atgaacgtat ccattctggg
     4021 tgcggcacga ctcggtcagg caggtatagt tgaagtaacc gccaccggtt cccgacggag
     4081 cgtattgcct ggcccaggca taggccgggt gattgtgcca atcgccgacc cgttcgctgc
     4141 cggaggcagc gatgccccac ggggccttgg cgcgggtgct gaagatcgaa ggacagttgt
     4201 cgttgcaccc gaagaatttc tgatagtaca catcgtgggg tcccaccaga ccgccaccgt
     4261 actcgaagag ggtgttctcg gtccccacga tcgcattccg ccgctggctc cagagcgtcc
     4321 aggcattcgt ctccgtgctg tccatccact ggatccggta gccggcctgg gtgatcgtac
     4381 tggtcgacgc agggacttga gccgctccgt cggtcgggaa gtagatcacg ccgtcgccgc
     4441 cggcgaaggg gtagtccccg gcgctgtagg cccgcaccgc atgcgattgc gcgttcacga
     4501 agaccgccgc ccggcggggc gcgggcgtgg tggcgccgta ggccgaggtg aacggcatgc
     4561 agggcggcgt ccccccgttt cgcaacgtca cgtacgtggg atagcctccc gccaggtcgc
     4621 aattgcgata gcgactgatc ccgttgtgcg agcgggtgtc catggtgatg acttggccat
     4681 agggccatcc cgacgcgatg aaccgcttgt cgaccaccag ggtcaatccc tccatgtcgt
     4741 tctcatggaa atcctgcccc agggtgcagg tcacactgca ccagtcccgc ggccagaaga
     4801 gcccatagtg caggaaatac cggtttgtat cctcgatcag cgaggtgtag acgtaggccc
     4861 gcttggggta gagataggta ttctcccagt tgtccgtccc acgccaattc ccgtcgaacg
     4921 tgatccgggt gagcagatcc tgctccgagt gatcctcgat atcctggtag atcaccggtg
     4981 caaaaaagcg gatcacttgc tgccgcaccg cgtccgaccc cccgatgatc ggcgggacca
     5041 gcttggggag cggcgggtca cccgtctccg ccgtgaccgg cccctcgacc ggttcgacca
     5101 gcgcgccgcg acatgcggcc agtactacta ccgccccgag acacccgcgc accccgaacc
     5161 cgcgccatgc cgaccgcatc gtgccctcct tggaatggag gtcccaaggt gggagctgaa
     5221 acggtgatga tcgtcatcga aatcgggcga acgcgatttt gaaatctgcg atgctacctg
     5281 ggggcaagcc tgcgggtcga actggtcgga aaaggtcgga aaagtcggaa aggtcggaaa
     5341 agtcggaaaa gtcggaaagt cggaatggtc ggtacggtct tttccgaccc ttacgaccct
     5401 tccgaccctt ccgacgatgg taagctcaga gctcgagctc ctgtaaccgt cgcaacgcca
     5461 ggcggatcga cgcgaccgcc gcgccccccg tgaggaagag caccagtccc agcgcaaaca
     5521 ggaggtcccg ggtcgcggta aagggagccc cggtctggcg ggcccgcagg taggcagcca
     5581 ccggcgcggc ctcgatcgtg ataacggccc cgagcagggt cacgctcgcc atcatgaaca
     5641 acagaccgcc gaaactggtg ggaatctggg ccgcgttctc ggtctcgaat tgggggtagt
     5701 acacccccat ggcgagcgcc atcgcggcgg cggccaccgt gaagcagatc gtgctgccga
     5761 tactcaccgc catcatgaag gccgacgcct gcaggatggt gttggtgatg acggtgatga
     5821 ccagcgccag caccagcagg ggcagcgtcc cgatccagta cttgctccag agcagggtcc
     5881 gctggtccag cgggctggag cggagcagcc acaattggcg tccctccagc gaaaccgccg
     5941 ggaagatgaa ccgggcggcg atggccgcga gcacgaaacc ggccagcccc tggttcagga
     6001 agaccaccag ggtcaccagg gtaaagggca ccttttcgcc cgagaacaag ggcagggccc
     6061 tgatgttgaa gacgtagacc agcagcagca ccgccagcag aatcagctgg ctccactggg
     6121 tcgtgtcccg aaagaacaac ttcaggtcct tgagcaggaa ttctcgacgg gtcaccggca
     6181 gccagcccag cgtgccgcgg acgatccggt cccacccccg tccgcggagg tacgagttgg
     6241 cgccttcctg cgccttggag tagccggtcg ggtacagccg gagatgcagc agcgctccga
     6301 acaccaccag cgcgccggcc gtggtccaca ggagcgcgat cggcagcggg tccgacaccc
     6361 ggagcagcca gttcatgatg acctgggccg accattcgct gggcaggaac gcactggagg
     6421 gggtctgcag cacggcgatg aattcgatca ggttctggaa gccttccggc cgcgccagct
     6481 gctccggctg catcagccgg agcagcagga ccacgccggc caccgccccg gcggccacca
     6541 ggctcagcac gtcccgggtg cgtcgtgccg ggaagatgtt gacgaggagc agggtggcgg
     6601 ccactccgac caccgacggc agcaacagaa acggcgccag ggccgacagc gccacgaacg
     6661 ggaacagcgg accgccgcga tacacgatgc cgtacgccgt gagcagcggg aaggcgagca
     6721 gcaccaccat ccacgacgag tggatcatgg tctcgcaaag cttggcgaga tagaagcgga
     6781 gccagtcgac cggcgccgac accatcatgt cgagatcctt ggccaggaag aacgtggaga
     6841 gcgcggtcac cagattcgag agcagcagaa tgccgccgaa ggccatcaac gtcatcgcca
     6901 gcattttccc ggcgagcaga ctgccgattt cttccacgcc ccggaaatag cggagcactc
     6961 gaaagctgat cccgaacacc gcggaccaga agcccaggcc aatgacggca aagagcaggg
     7021 tccggcccgg gctccggttc tgccgcagcc gggccagcac gctccgccac tggggcgtga
     7081 gtacggtcca gaggtgcggt tgccgtccga cccggggtac cgggaccggc accgccggga
     7141 gatcaagcgg cgaagaggtc actgagctcg cgctccgaga gcccgccggt gagcttgagg
     7201 aacagctcct ccagggtcgc atcgccggcg gcatgttgct cccggagctg ggccatggtg
     7261 ccggcggcca gcagtttgcc gccccgcacg atcgcgatcc ggtcgcacat gccttcggcg
     7321 atctcgagcg tgtgggtgct catgaggacg gttcctcccc gctccacaaa ccggcggaac
     7381 aggtccttga gcaggcggcc gctgcgggga tcgagcccta ccatcggctc gtccaccacg
     7441 atcacttccg gccggtgtac cagggcgctc gagatgatca gcttctggcg catcccatgg
     7501 ctgtaggact cggtcagctc atccttccag ggcgtcagct cgaagagctc cagcaactcg
     7561 ttgatgcgat tctcgaccgg cggaccttcc tggccgaaga gcgcggcggt gaaccgcagg
     7621 aactcggccc cggtgagctt gtcgtagacg aagggacgat ccgggatgta gcccagccgg
     7681 gccttggcgc cgaccggatt gcgctgaata tcctcgccgc cgatctccac cacaccggac
     7741 gtcggcttga gaatcccggc gatcatccgg agtgtggtgg tcttgccggc gccgttggga
     7801 cccagaaacc cgaacatggt ccccgccgga atctcgagcg acagcccgtc caccgcggtg
     7861 aacgagccgt accgcttggt gagatcggtc agtcggatca tcgccggacc gccaggatcg
     7921 tggtgcgaag ggaagccacc aggggaacca gagcgagtgg ccgtgaatcg gggccttccg
     7981 acacccgcag cagtgacgct gcggccggca cgtgtccgta gaccggatcg accgcgatcc
     8041 actggtcggc ctcccagact tcggcccaga tgtgggaggg cagctccggc cggccggcgt
     8101 ccaccccgat gaccggtctg gccggctttc ccgccaaccg tgcgaactcg accaatagag
     8161 ccacctttcc gcgagcccca cccatccgtg tggcggccac gttctgaacg ctggtggtgc
     8221 tcgaatcgtc aaccaggcgg accgaatggg agacccactg tactagatgg gcgagcgtgt
     8281 cgctcccctc cggcatcgcg gccagcgcgc gggcgtaggc ctcgcccgcc gagcggttgc
     8341 cggttgcctg catcagcgcc tgatcgggct gggtagagcc cggaatcggt tttccccgtc
     8401 gccggaccgt caccgtgtcg tgcgaaaccg cttggcggcc gccctggaag acctggctcg
     8461 atcccggcca tgccgggccg tccaatcgcg ccacgtggat caccagctcg cggatcgtgg
     8521 tatcgggcgc gccggcgaag ctcgtgcgag cccgcgcccc ggtgatcgtc tggggcagcg
     8581 agatccggcc cccccgaagg gcagcctggt acctgttgta attcacctcg aacggtgagc
     8641 gctccagggt gaggccgaag gcccaggagc gttgcagcag ccgtccttgt gcatcgaccc
     8701 attcgatcat gggcatccca ccccaggtgc gctccacctg ccacgcagtg acgccggggg
     8761 ccggtaccgc cacccaatcg ctccgggtgg agtcccacac cgcgctgtcc gacaccgcca
     8821 tgacggcatc tcctatcacc cgggctgact gcacctcgct tcgtttcatc ataggcagcg
     8881 ccaccgtccg agacacgctg gcgccccgct ccagccgctt ttccgccgcc agccggaaca
     8941 ccagcccggc agcaatggtg atcgaccggc cgcccagctg ggcggcctcg gactggccgc
     9001 ccggccgtcg ctcctccagc gtcacaaggc tgtcgccctg ctggagttcg agaatccggg
     9061 ggacaccggc ctcgctcagg ttcacgacct gcgtttgcag cttgagggag cgtgacaatt
     9121 ccgcgtcact ccggtagaca tgccgatggg aacgggtggg gcccgccagg tccatgctcc
     9181 agacttcggt gacgcgatac ccggtgaaga ccgtgtcgag ggttatcccg gcgttgccca
     9241 tcggcacgcc gttcaggagg atctggtaga atgcagcgct tggggccagc cgagccgcgg
     9301 ctgcctccag gaacgcttcc gggggccggc tgatctggcg aatcaccagc caggtcatgc
     9361 agaccatcca ggagccgaca ataaccgtgc caaccgcccg ccgggtcatg acattccggc
     9421 ttcgcgggct ttccgatgca tgaccatggc ctcctctgtc cgtccgattc ggtccaggag
     9481 acgtcccagc agtttgtatg cccgcgaatc gttgggggcg agttcggttg cccgcaataa
     9541 cgtccgctcg gcccgctcca gctggccggc gtgataccag gcctccccca gcaggaagac
     9601 cgtctcggga tggtccggag ccagttcggc ggcccgctgc agcaacggga tggcatccga
     9661 ctgtttgccc cgccgaaggt agcttaggcc caggtgcagg agggcgtcga gcccgtcggg
     9721 cgcggtcccg atcgctgtac ggagatcggc ttcagcctcg gtgtaacgtc ccagccggcc
     9781 cagaaacgct ccccgttgca cccggagcgc caccgccccg ccggtggcct ggaggccggc
     9841 gtccagggtc tccagcgctt cctccccctc gccggcggcc tcgagcagtc gcgccaggtg
     9901 gagcagcagg tcgacttccg ctggggcatc ctgcaccgcc tgccgcagca cctgaatggc
     9961 atccagccgt cggcccagct gctccagatc atggacccgg ttgaggaccc ggaccggctc
    10021 cggctcgtcg accaggggct cgggcagcga gggcttgggg ccgggcatgt cgacggtaaa
    10081 gggccggagc gcgggacctt cgtccggacc cgggtcgcgc agatcgccct ccagcgcggg
    10141 cggatcgaaa cccagcgcgg cgtcgtccat gccatggccg gctcgccggt tgaacattcg
    10201 catcgcggag aagggtaggc ggaggcgccg ggcagtggta gagagcgctc actaccatcc
    10261 gggccggttt ccgcctacgt tccccgggct atggctcagg aaagcctgat cgtccgcggg
    10321 gctcgcgaac acaacctcca gaacatcacg gtcgaaattc cc
//
LOCUS       DASWKS010000239         5190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1215853, whole genome shotgun sequence.
ACCESSION   DASWKS010000239 DASWKS010000000
VERSION     DASWKS010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215853"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..3057)
                     /locus_tag="VGA78_06995"
     CDS             complement(142..3057)
                     /locus_tag="VGA78_06995"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HEX9893653.1"
                     /translation="MRLTKVVGLGGVFLAALSLQAVAQEVAGTVVDSRTGRPLDRVQV
                     VAEGGSGARTDSRGRFRITGLTGAQVTLNVALIGYRPVVQTARVGDTELTIRLTEMAV
                     NLGEIVVTGTVAGAEKRTVGNSVTTVRAAEVQDLAPAPDMSNLINSRAPGVVVIPGTG
                     QVGAAPRIRIRGVNSFSLSDQPLIYIDGVRVANDVSTGIVVQAFGSGIGGRLNDIDPD
                     QIESIEIIKGPAAATLYGTEAANGVIQILTKRGKVADRPEIKLGIRVGGQWFMNPEGR
                     IVQPINRVNGELVSWNPVAQEEALGNKLFRTGFGQGYTLSIAGGTPLFNYYAGSTWDR
                     DKGIEPTNEQKRFTTNLHLAITPSSKYDIATSLGIVRNDINQAFEAGAGGIWFSTIFG
                     DPAQVNTPTRGFIFGPPEYQWGARQANQLVNRYTGSIQINHRPNTVFNHRLVLGLDQT
                     EEGSEQLNNFLPPEYVQFNPGVAALGGAFSQRRDIQYTTVDYSGSAKLNLSSSWRSTT
                     SVGGQLYRRRTDLVFANGSQFPAPGLETVAATAVRVGSHDFVENTTIGVFGQQQMGYK
                     DRLYLTAAARIDNNSAFGENFDFVVYPKVSGAYVVKEGGEGNVNALRLRAAYGQSGQQ
                     PEAFAALRSFQPVTGGDGGAAVIPQFVGNPDLKPERSTELEIGFDGGFLNDRLAADFT
                     FYYQRTRDAILLQNIAPSAGFPGNQFINIGAIRNVGFELQLTGTPIRKDNTDLQLNFS
                     VSRNANEVDDLGEGVTELNRVTGPKVGFPVDAIFRRKVIQAELDANGRAINVLCDDGN
                     GGGVACTSAPGVFLGVWDPRYEGSFSANLTLWKRLRLYGLVDFKLGNKHFDNNRRALC
                     QVFLRCDENFNPSNYDPLIIAELQSNNVAQSWIINDAGFAKLRELAAQYQLPRSVAGF
                     LGGRDVTLGLSARNLHTWTDWTGLDPEAYFVTQLFTRLEQDNTPQLASVMFNVNITF"
     gene            complement(3202..3918)
                     /locus_tag="VGA78_07000"
     CDS             complement(3202..3918)
                     /locus_tag="VGA78_07000"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX9893654.1"
                     /translation="MTLPSRPPPPAPPDRVSHAYEEIRDLIVRGRLAPGTRIHETEAA
                     LRLGSSRTPVRAALQRLQQEGYVTGATPGRRARPTVTPLTLDDARELFSIVGDVEGLA
                     AERAAELPGPARRALARRLTRINEDYLRAASGRRPEPDRLFWLDTVFHRTYVEAGAGS
                     RLLALHDAIKPQVERYVRVYQTALLEAIQTSVREHRVIVEKIETGPPEAAHLAVRANW
                     RNAADRMRAVIGSRGETGAW"
     gene            3999..>5190
                     /locus_tag="VGA78_07005"
     CDS             3999..>5190
                     /locus_tag="VGA78_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893655.1"
                     /translation="MRRRSRPALALLAVGMALTGATRVPAQQGPWALTNARIETVSRG
                     LIERGTIVIRDGLITAVGAAVTVPPDARVLDLSGRTVSPGLIDLISSAGLPAIPPSTT
                     PGGAGQATSPSGLEPDNLVAELVRLSPSDARSLRGSGITAVLVARSRGLFRGQSALLP
                     ARDSATGTSAIRSPVAQHVGYQGVGGGVYPGSLLGVIATQRQMLFDAKRYGILIDRWR
                     SSPRGLTRPEHDARLEALVPAARGQQPVFVDARNENEIRRAARLGREHGLKLTVVGAT
                     EGWRAVDALRGIGTVVSLDFPRPTEVTGWRFRAGLNRTPGDSAAADREARQLIEGNAA
                     ALHQAGIRFALSSGGRPSELLTNVRKVVSAGLPVRVALEALTQRPAELAGVADALGTI
                     EVGKI"
BASE COUNT          787 a         1721 c         1785 g          897 t
ORIGIN      
        1 agcagcttgg cgttagaggg agtgagcaag gtttcttcct gtacccggct cggcgcggtt
       61 tgttccagca atccactgca gcccgcgagg accgccgcga gcaggagcgt cacgatgact
      121 ttcgtcctgt gcatggccgc ctcagaaggt gatgttgacg ttgaacatga ccgatgccag
      181 ctggggggtg ttgtcctgct ccaaccgggt gaaaagctgg gtgacgaaat acgcctcggg
      241 atcaaggccc gtccaatcgg tccaggtgtg gaggttccgg gccgacaatc cgagcgtcac
      301 gtcccgcccg cccaggaagc cggccacact ccggggcagc tggtactggg ccgccagctc
      361 gcgcagcttg gcgaacccgg cgtcgttgat gatccaggac tgagccacgt tgttggactg
      421 cagctccgcg atgatgagcg gatcgtagtt ggaggggttg aagttctcgt cgcagcgcag
      481 gaagacctgg cagagcgccc gccggttgtt gtcgaagtgc ttgttgccga gcttgaagtc
      541 caccaaaccg tacaaccgga gccgcttcca cagcgtcagg ttggcgctga acgagccctc
      601 atagcgggga tcccacacgc cgaggaacac acccggcgcc gaggtacagg ccacgccgcc
      661 cccgttgccg tcgtcgcaca gtacgttgat ggcgcggccg ttggcgtcga gctcggcctg
      721 gatcaccttg cggcggaaga tcgcgtcgac cgggaagccg accttgggac cggtcactct
      781 gttgagctcc gtcacccctt ctcccaggtc atccacctca ttggcgttgc gcgagaccga
      841 gaagttgagc tggaggtcgg tgttgtcctt ccggatcggg gtcccggtga gctgcagctc
      901 gaacccgacg ttccggatgg ccccgatgtt gatgaactgg ttcccgggga atcccgccga
      961 tggcgcgatg ttctgcagca ggatggcgtc gcgggtccgc tgataataga aagtgaaatc
     1021 ggcggctagc cggtcattga ggaagccccc atcgaacccg atttcgagct cggtgctccg
     1081 ctccggcttg agatcggggt tcccgacaaa ctgcgggatt accgccgcgc cgccgtcgcc
     1141 gccggtgacc ggctggaagc tccggagagc ggcgaacgct tcgggctgct ggcccgactg
     1201 gccgtaggcc gcccgcagcc gtagcgcgtt gacattgcct tcgccgcctt ccttcaccac
     1261 gtaggcgccg ctcactttgg ggtagaccac gaagtcgaag ttctcgccga aggcgctgtt
     1321 gttgtcaatc cgcgccgccg ccgtcagata cagccggtcc ttgtagccca tctgctgctg
     1381 gccgaacacg ccgatggtgg tgttctccac gaagtcatgg gacccgaccc gcaccgccgt
     1441 cgccgcgacg gtctcgagcc ccggggccgg gaactgggag ccattggcaa acacgagatc
     1501 ggtgcggcgg cggtagagct ggccacccac cgaggtggtc gatcgccaac tgctgctcag
     1561 gttcaacttg gcgctgcccg agtaatccac cgtggtgtac tggatgtcgc gccgctggga
     1621 gaaggcgccg ccgagcgccg cgaccccggg attgaattgc acatactccg gcggaaggaa
     1681 gttgttgagc tgctcgcttc cctcttcggt ctggtccagc cccaggacca ggcggtgatt
     1741 gaagacggtg ttggggcggt gattgatctg gatgctgccg gtgtagcgat tcaccagctg
     1801 attggcctgg cgcgcgcccc actgatactc gggcggcccg aagatgaagc cgcgggtcgg
     1861 ggtgttgacc tgggccggat caccgaagat ggtggaaaac cagatgccac ccgccccggc
     1921 ttcgaaggcc tggttgatgt cgttccggac aatgccgagc gaggtggcga tgtcgtactt
     1981 ggacgagggc gtgatggcca ggtggaggtt ggtggtgaag cgcttctgct cgttagtggg
     2041 ctcgatgccc ttgtcccgat cccaggtgct gccggcatag tagttgaaca gcggcgtccc
     2101 gccggcgatg ctcagggtgt acccctggcc gaagccggtc cggaacagct tgttgccgag
     2161 cgcttcttcc tgcgccaccg gattccagct caccagctcg ccgttcaccc ggttgatggg
     2221 ctggacgatc cggccttcgg ggttcatgaa ccattgcccg cccacccgga tcccgagctt
     2281 gatctcgggc cggtcggcca ccttgccccg cttggtgagg atctggatga cgccgttggc
     2341 ggcctcggta ccgtagagcg tggcggcggc gggtcccttg atgatctcga tgctctcgat
     2401 ctggtccgga tcgatatcgt tgagccggcc gccgatgccg gaaccgaagg cctgcaccac
     2461 gatcccggtc gagacgtcgt tggccacccg cacgccgtcg atatagatca gcggctggtc
     2521 cgagagcgag aagctgttga cgccccggat ccggatgcgg ggggcggcgc ccacctgacc
     2581 ggtgcccggg atgaccacca cgccgggggc ccggctgttg atgaggttgg acatgtcggg
     2641 cgcgggggcc aggtcctgca cctccgccgc ccgtaccgtg gtcaccgaat tccccacggt
     2701 gcgcttctcg gcgcccgcca ccgtcccggt gacgacgatc tcacccagat tcacggccat
     2761 ctcggtcagc cggatggtca gttcggtgtc accgacccgg gcggtctgca ccacggggcg
     2821 gtagccgatc agggccacat tgagcgtgac ctgggccccg gtcagtccgg tgatgcggaa
     2881 ccggccccgg ctgtcggtcc gggcgccgct gccgccttcg gccacgacct gcacccggtc
     2941 caggggtcgt ccggttcggg agtccaccac ggtaccagcc acttcctgag ctacggcctg
     3001 cagggagagc gcggcgagaa agacgccgcc caggcccacg accttggtga gtctcatagc
     3061 gtgctccgtg aacatgaggc aggactgaac ccgtttggac cgacgcttgc acacatggat
     3121 gaatacttga ttgcatccaa tcgttcgtat ggtaatgcgc gttttggggc cccgcaagca
     3181 gccggtcagg ctgagaaacc cttaccaggc gcccgtttca cctctggaac cgatcaccgc
     3241 ccgcatccgg tccgccgcgt tgcgccagtt ggcccgcacc gccagatggg cggcctccgg
     3301 ggggccggtc tcgatcttct ccacgatgac ccgatgctcc cgcaccgagg tctgaatcgc
     3361 ctccaacaat gcggtctgat atacccgtac gtagcgctcg acctggggtt ttatggcgtc
     3421 gtgcaacgcc agcagccggg aacccgcccc ggcttccacg taggtgcgat ggaacacggt
     3481 atcgagccag aagagccggt cgggttcggg acgcctgccc gacgcggccc gcaggtagtc
     3541 ttcattgatg cgggtgagcc ggcgggccag ggcccggcga gccggccccg gcaactcggc
     3601 ggcgcgttcg gcggccaggc cctcgacgtc gcccacgata ctgaagagct cccgggcatc
     3661 gtccagggtc agcggcgtca cggtggggcg ggcccgccgc cccggggtgg cgccggtgac
     3721 gtacccttcc tgctgcagcc gttgcagggc ggcgcgcacc ggggtccggc tcgaccccag
     3781 ccggagcgcc gcttcggtct cgtgaatccg cgtgccggga gcgagacggc ctcgcacaat
     3841 gaggtcgcgg atttcctcgt aggcgtggct cacccgatcg ggcggggcgg gcgggggcgg
     3901 gcgcgatgga agcgtcatgg atctcccacg attgtatcct gggtttcgtc ccggcactag
     3961 attcccgatc cgcggaacat tcttgctgga gatcacgcat gagacgacgc agcaggccgg
     4021 cactcgccct tctggcagtc ggaatggccc tcaccggcgc gacccgggtt ccggcccagc
     4081 aaggtccctg ggcgttgact aacgcccgga tcgagacggt cagccgcggc ctgatcgagc
     4141 gcggcaccat cgtcattcgg gatgggctca tcaccgcggt gggcgctgcg gtcacggtgc
     4201 cgcccgatgc ccgggtgctc gatctgagcg gccgcaccgt gtcacccggg ctcatcgatc
     4261 tgatttcctc ggccggcctg cccgccatcc cgcccagcac gaccccgggc ggcgccgggc
     4321 aggcgacttc tccctccggg ctcgagcccg acaacctggt ggctgagctg gtccggcttt
     4381 ctcctagcga tgcccggtcg ctgcgcggca gcggcatcac cgcggtgctg gtggcgcggt
     4441 cgcgcggttt gttccggggc cagtcggccc tgttgccggc ccgcgactcc gccaccggaa
     4501 cttccgccat ccgctcgccc gtggcccagc atgtgggata ccagggcgtc ggcggggggg
     4561 tataccccgg gtcgctgctc ggggttatcg ccacccagcg tcagatgctg tttgacgcca
     4621 aacgctacgg catcctgatc gatcgctggc gcagcagccc gcggggcctg acccggcccg
     4681 agcatgacgc ccggctggaa gctctggtcc ccgcggcgcg ggggcagcaa ccggtcttcg
     4741 tcgacgccag gaacgagaac gagatccggc gggcggcgcg gctgggccgg gaacacgggc
     4801 tcaagctcac ggtggtgggc gccaccgaag gttggcgggc ggtcgacgcg ctgcgcggca
     4861 tcggcacggt ggtctcgctc gactttcccc ggccgaccga ggtcaccggc tggcgcttcc
     4921 gcgccgggct caaccggact ccaggtgaca gtgccgcggc cgaccgggag gcccgccagc
     4981 tgatcgaagg caacgcggcg gccctgcacc aggccgggat ccgattcgcg ctctcctcgg
     5041 gtggccgtcc ctcggagctg ctcaccaatg tccgcaaggt ggtttcggcg gggctgccgg
     5101 tgcgggtggc gctcgaggcg ctgacccagc ggccggcgga gctggccggt gtggccgacg
     5161 cgctgggcac catcgaagtc ggcaagatcg
//
LOCUS       DASWKS010000240         3809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_847854, whole genome shotgun sequence.
ACCESSION   DASWKS010000240 DASWKS010000000
VERSION     DASWKS010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3809
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847854"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..2731)
                     /locus_tag="VGA78_07010"
     CDS             complement(242..2731)
                     /locus_tag="VGA78_07010"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9893656.1"
                     /translation="MVHAIWLYARAGLRLAGMALMLPTWALAQTGRISGTVSGPARAP
                     LAGAIVTVTEANREATSASDGRYTIEGLRAGTYSVLVRRIGSRPQTLSGIVVRAGEST
                     PLDVTLDDMPQQLSGIVVSASRRVEKITDAPATISRLDAEIIGSTPGYGITNVLKEVK
                     GIDYVQVGMTVAGINARGFNSSFNNRMLQMEDGRISVLAESGLPIGNFTPTPKIDLAA
                     VEVIVGPGAALYGPDASNGVVTAETKDPAQYPGTTVDLSFGNRSFFDAQARYAAQRGN
                     WAYKIAGEYLTANEFENRLNYGGVTGTLPNRTPEQGINWTAQSWRTSGALGYYSGANR
                     FLVSAGYSSNDGVGITNVGRNQLENYSYNFVQAKYTTPRLYFNAYRTGSRTGDTYAIN
                     AFSQNRVTQPASVSDDSVKHLSDFPGSGTTYAGEAQHNFNLIPLLNTRVVWGGQLRQD
                     LISSKRQWLDDRLTGEDIAVTQYGVYGQTETPLGRMFRVVLAARFDKHEDYESQFSPK
                     AAVLFTPVADNTFRLSYGKAYKSPSTLQTHFSAADFAVLAPTLGLGVFGNREGFTVRN
                     AAGTVLATYDPLVPETNTTWELGYKGIIADRLYLDVTGYRGTYENFLSPLITIANPLA
                     NQFAYDAAGNKIVGPTGREQIVLTYLQVPEKADLTGLDLGLRFFFTDHIALGGTYSSV
                     SFDAPDTTGATTALKEATALNTSPEKWTLGLNFTNLPTNLSFGAGMRKVVGYFFRSGI
                     NVGEIPGFTSLDVHASYYLPKPRITLSAAVNNFYGCSRGRYTLADNPTTQAPPGTLDR
                     ENQCGFGQKHMEMVNAPEIGPMAFFGVRYHY"
     gene            complement(2744..3166)
                     /locus_tag="VGA78_07015"
     CDS             complement(2744..3166)
                     /locus_tag="VGA78_07015"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX9893657.1"
                     /translation="MRFDELSLGQTATIRKTITQADIEVFAGLTGDFNPIHMDAQYAG
                     RTRFGGRIAHGMLTAGLVSQVLGMRLPGTGAVYLSQTLRFKAPVRAGDTIEARAEVLE
                     LMPEKRRVRLRTLCVNQSGDTVLDGEALMLVDDVPTLS"
     gene            complement(3166..>3809)
                     /locus_tag="VGA78_07020"
     CDS             complement(3166..>3809)
                     /locus_tag="VGA78_07020"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893658.1"
                     /translation="LTLLLFFGVGMAVKAEVARGALAPLRTPDDATPVFLLRYTPLFL
                     AALVFSGVAAAVMSTVNSFMNIGAAAVTHDLPTAFGWRRGNQLRRGRIATVVLSVAAA
                     GLAQVSGQLVAFLGVFGWGLFATTLVPALAIGLNWRGATRAGAIASIATGLVLTLLFE
                     TLAWFKLYSFPTGVTVSGLSLVVSLLTFFAVSWLTRRRAPAELDDDIRLVMEV"
BASE COUNT          650 a         1206 c         1309 g          644 t
ORIGIN      
        1 tggagcacga ccagcagcgg cagcgggtcg ccgccgccga cccgcccggg tacgaacagg
       61 cggtagcgcc gccggccgag gggcgtctcg atcacgtgct ccgtgaacga ggtatcaggg
      121 aggaattggc ccattgtggg aaagagaatg cagaatgcag agtgcagacc gcagagtgca
      181 gaagggttca gcatgggtcg catccttctg aattctgcac tctgcactct gcattccgaa
      241 ttcagtaatg atacctcacc ccgaagaacg ccatcgggcc gatctcgggc gcgttgacca
      301 tttccatgtg tttctgcccg aacccgcact ggttctcccg gtccagcgtg ccgggcggcg
      361 cctgggtcgt cgggttgtcc gccagggtgt atcgcccccg ggagcagccg tagaagttgt
      421 tcaccgcggc gctgagcgtg attcggggct tggggagata gtacgacgca tggacatcga
      481 gggaggtgaa gcccgggatc tcgcccacgt tgattccgga gcgaaagaag taccccacca
      541 ctttgcgcat gccggcgccg aacgagaggt tggtgggcag gttggtgaaa ttcagcccca
      601 gggtccactt ctcgggcgag gtgttgagcg ccgtggcttc cttcagcgcc gtggtggccc
      661 ccgtagtatc gggcgcgtcg aagctcacgc tgctgtaggt gccccccaat gcgatgtgat
      721 cggtgaagaa gaagcggagg cccaggtcca gcccggtcag atccgccttc tcgggcacct
      781 ggagatacgt gagcacgatc tgctcgcgtc cggtgggccc gacgatcttg ttcccggccg
      841 catcgtaggc gaactgattg gccagcggat tggcgatggt gatgaggggg ctcaggaagt
      901 tctcgtaggt tccccgatag ccggtgacgt ccaggtagag ccggtcggcg atgatgccct
      961 tgtaacccag ctcccaggtc gtgttggtct cggggaccag ggggtcatag gtcgccagca
     1021 cggtccccgc ggcgttcctg accgtaaagc cttcccggtt gccgaacacg cccaggccca
     1081 gcgtgggagc gaggaccgcg aaatcggcgg ccgagaagtg ggtttgaagc gtgctgggtg
     1141 atttgtacgc cttgccgtag gacagccgga acgtgttgtc agctaccggc gtgaacagca
     1201 cggccgcctt ggggctgaac tgggactcgt agtcttcgtg cttgtcgaac cgggccgcca
     1261 gcaccacccg gaacatccgg cccaggggcg tctcggtctg accgtagact ccatactggg
     1321 tcaccgcgat gtcttcgccg gtgagtcgat cgtccagcca ctggcgcttg gacgagatca
     1381 gatcctggcg cagctgcccg ccccacacca cccgagtgtt gagcagagga atgaggttga
     1441 agttgtgctg ggcctcgccg gcgtaggtgg tcccggagcc ggggaagtcc gaaagatgtt
     1501 tcaccgagtc atccgacacg ctcgccggct gggtcacccg gttctgggaa aaggcgttga
     1561 tggcgtaggt gtcgccggtc ctggagccgg tccggtaagc gttgaagtac agccgcggcg
     1621 tggtgtactt ggcctgcacg aagttgtagc tgtaattctc gagctggttc cggcccacgt
     1681 tggtgatgcc cacgccgtca ttgctggaat agccggcgct caccaggaag cgattggcgc
     1741 ccgagtaata ccccagggcg ccgctggtcc gccacgactg tgcggtccag ttgatgccct
     1801 gctcgggggt ccggttcggc agggttccgg tcactccgcc gtaattgagc cggttctcga
     1861 actcgttggc ggtcaggtac tcgcccgcga tcttgtaggc ccagttgccc cgctgggcgg
     1921 cgtagcgcgc ctgggcgtcg aagaagctgc ggttgccgaa cgagagatcc accgtggtcc
     1981 cgggatactg ggccgggtcc ttggtctccg ccgtcacgac gccgttggag gcatcgggcc
     2041 catacagcgc cgcacccggt cccacgatga cctcgaccgc ggccagatcg atcttgggcg
     2101 tcggcgtgaa attgccgatg ggcaggccgc tctcggccag cacgctgatg cgtccgtcct
     2161 ccatctgcag catgcggttg ttgaaggacg aattgaagcc gcgggcattg atcccggcca
     2221 ccgtcatccc gacctggacg taatcgatgc ccttcacttc cttgagcacg ttcgtgattc
     2281 cgtaccccgg cgtgctcccg atgatctccg cgtcgagacg ggaaatggtg gcgggagcgt
     2341 cggtgatctt ctccacccgg cgcgacgcgg acacgacgat gccggacagc tgttgcggca
     2401 tgtcgtccag ggtcacgtcc agcggggtgc tctcaccggc gcggaccacg atgcccgaga
     2461 gcgtctgggg ccggctgccg atgcgtcgca ccaggacgga ataggttccg gcccgcaggc
     2521 cttcgatcgt atagcggccg tcggaggcgc tggtcgcttc ccgattcgcc tcggtcacgg
     2581 ttacgatggc gccggccagc ggcgcccgcg ccggtccgct caccgtgccg gagatccggc
     2641 cggtttgggc cagagcccag gtcggcagca tcagggccat ccccgccagc cggaggccgg
     2701 cccgggcgta caaccagatt gcgtggacca tcgaaggatt ctcctaggaa agcgtgggaa
     2761 cgtcgtccac cagcatcagc gcttcgccgt ccagcacggt gtcgcctgac tggttgacgc
     2821 agagggtccg gaggcggact cgccgtttct ccggcatgag ctccagcact tcagcccgcg
     2881 cctcgatggt gtcgccggcg cggaccggtg ccttgaatcg cagggtctgg ctcaggtaga
     2941 cggcgccggt ccccggcagc cgcatgccca ggacctggga gaccaggccg gccgtcagca
     3001 tgccgtgggc gatccggcct ccgaagcgag tccgtcccgc gtactgggca tccatatgga
     3061 tcggattgaa gtcgccggtg aggccggcga agacctcgat gtccgcctgg gtgatcgtct
     3121 tgcggatggt tgcggtctgc cccaggctca gctcgtcgaa acgcatcaga cctccatcac
     3181 caggcggatg tcgtcgtcca gctccgccgg agcccgccgg cgggtaagcc aggacacggc
     3241 gaagaacgtc agcagcgaga ccaccagcga gagacccgac acggtcacgc cggtggggaa
     3301 cgagtagagc ttgaaccagg cgagggtctc gaacaggagt gtgagcacca gaccggtcgc
     3361 aatggacgcg atcgcgccgg ctcgggtggc gccgcgccaa ttgagaccga tcgccagcgc
     3421 ggggaccagc gtggtggcga agagacccca gccgaacacc cccaggaacg ccaccagctg
     3481 gcccgacacc tgggccaggc ccgcggcagc gaccgacagg accaccgtcg cgatccgtcc
     3541 ccgccgcagc tggttcccgc gacgccatcc gaacgcggtc ggcaggtcgt gggtgacggc
     3601 cgccgcgccg atattcatga aggaattcac cgtgctcatc acggccgccg cgaccccgga
     3661 aaagaccagc gccgcgagaa acaggggggt gtatcgcagc agaaagaccg gagtggcgtc
     3721 gtcgggagtc cggagcggcg cgagggcgcc gcgggccacc tcggccttga cggccatgcc
     3781 gacgccgaag aagagcagca gcgtgagca
//
LOCUS       DASWKS010000241         6538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_848200, whole genome shotgun sequence.
ACCESSION   DASWKS010000241 DASWKS010000000
VERSION     DASWKS010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848200"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1685)
                     /gene="selB"
                     /locus_tag="VGA78_07025"
     CDS             complement(<1..1685)
                     /gene="selB"
                     /locus_tag="VGA78_07025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEX9893659.1"
                     /translation="MIIGTAGHIDHGKSTLVAALTGRSMDRLAEERRRGITIELNFAP
                     LELEGLAPIGIVDVPGHEDFVRTMVAGATGIDLVLLVVDAVEGIRPQTLEHLAIVEQL
                     GIPRGIPVITKIDLAEPDWVDLVAGDLVDRLEQSSVDFRPPIRVSPVTGEGMDALRDK
                     LRSAATSALAIGHSALSDLFRLPIDRAFAIAGTGPVVTGTLWSGSVRVGDQVRIEPGS
                     LRARVRSVESFGRAVDAAVPGSRTAVGLSGVEVGALRRGQVLLGTGEWQPTTVFDASI
                     ALLGGAPRPLITRARVRVHHGTAEAIARVYPRQPIEPGRSGPARVVPETPLVVRGGDR
                     FVIRSYSPVTTIGGGWIADPEPPRKAPWPEDLTAHQPAARLRALLTRRPAGVEVEAIA
                     RLLGAGASAVVSSTPGVTRTLGRLLLQQRVEDARQTVLTDLAEFHRRDPVATGKSLET
                     LRSGLGTLSWLTDNLLRELVLEEKVRVVAGRAALAGHQPASAGGEGEVDQVVAAVRAA
                     GLEGPTRSELAGLLHLKDLPGAIRMAVGRGLIESVERDRYVSLEAVGKLEEVLR"
     gene            complement(1682..2443)
                     /gene="recO"
                     /locus_tag="VGA78_07030"
     CDS             complement(1682..2443)
                     /gene="recO"
                     /locus_tag="VGA78_07030"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEX9893660.1"
                     /translation="MAALQSEAIVLSAIRYGETSKIVRLATRDRGIVSAIAKGALRPR
                     SRFGAALQLLSRGTAQYLPPRHGELHTLTAFDLQHLPLAVGAALERFAAAIAMAELVQ
                     RVGSADPHPEIFDALDQAIRELEHASPEAAEVLGLKWLWSIVCLLGFEPALAGCALDG
                     TLIPNGVPMAFSVSEGGALCPDCARSRAANWLPAEDRADLTVLLDPDAALPRLDPRHA
                     TAHRRLLARFIHHQVAEGANLPALDFWLREPWGQG"
     gene            complement(2449..3519)
                     /locus_tag="VGA78_07035"
     CDS             complement(2449..3519)
                     /locus_tag="VGA78_07035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893661.1"
                     /translation="MRFSITILLAAVASCSETTAPLPPPQELLLVANPGFETLSYVQL
                     SQGVGITQIPLGHAVPEDARPAAGRRFAILAVARGDTVAVVDLIRRRVSRTIAVGEGA
                     GALGGLVFNDSIAYVALSGRDALMRLNLESGDTLSIAVGHTPKAVAIARGKLFVVNAN
                     LVECPPPDGWCPAGESWVTVVDPITNTRAAPGDSIALPGPGHARYATIGADGRLYVIQ
                     MGGPASPEGRLSIVDPVLRAEVGNFGGFGEAPGPIAADAGERIMVSSRTEGLMEFNTR
                     TRTLIRGAGNGLPLSENVGVAIDTRNQIYGIEAGHCGGGLPGRARVFRQDLTEIRPIT
                     LGPCAGVATTALIPPETLLEAT"
     gene            complement(3620..4435)
                     /locus_tag="VGA78_07040"
     CDS             complement(3620..4435)
                     /locus_tag="VGA78_07040"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9893662.1"
                     /translation="MMLEARDLSVRYRGAAARALDGASLAVESGTLVVLVGPNGSGKT
                     TLMRALLGTVAAESGAALVDGRPVALWKRPELARFVGVVAQREEAWIPLTVEETVLLG
                     RYPRLGALTPIGPEDRAAGRRALERCDMWELRQRQVDGLSGGEWQRVRLARALAQEPR
                     ALVLDEPGAALDIRHEMEVMELVRQLVDDGLGCLLITHHINLAARYADRMVLLDRGRV
                     VASGTPDEVLRAEVVSQVFGWPIAVTQWEGWPQLVALRPVEGSRSGSKGVEGG"
     gene            complement(4432..5403)
                     /locus_tag="VGA78_07045"
     CDS             complement(4432..5403)
                     /locus_tag="VGA78_07045"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX9893663.1"
                     /translation="MTGRLFGLAAIALVSLVVGLHLGATLLGPDDLLRAIAEPASTEG
                     TILLNLRAPRVLLAFGVGAGLGLTGAVLQALVRNPLADPYLLGLSGGAGLGAVLAIAF
                     FTANPWALPVAAWAGALIAVALVYRLAVVAGRRLDPRILLLAGVVVSAFTGAIMSAIL
                     TLVPAPQLRNAFLWLLGGFSGSSWQALGIYAAYAAVPAGLLLLRARELDLLALGEEPA
                     QYLGADVERTKRVVYFAASLLTAAAVAVCGVIGFVGLVVPHAMRRVVGPLHGRLLPAV
                     ILTSGSFLVLADGLARWVVQPLELPVGVVTATIGVPLFALMLRRSLR"
     gene            complement(5400..6266)
                     /locus_tag="VGA78_07050"
     CDS             complement(5400..6266)
                     /locus_tag="VGA78_07050"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HEX9893664.1"
                     /translation="MRVVALLLAWLAACARPPASSGPIVLLDDAGDTVRLAQPARRVA
                     SLVPASTELLFAIGAGSQVVGRTKWCDWPAQARRVTDLGDGLAPNVEAILGVQPDLVV
                     LYRSARNAQAVQQLRRFGIATLQLRTDTFTDLNRNAALLGQATGHAVDAAALTAATDS
                     ALAAVDQRGRAGGPRILVLAWDQPPMTIGRGSFLHELVEMAGGRNVFADVASSAAPVS
                     LEAIAARNPDLILTTSESPTFARRPEWQVIPAVKYRRFTTVLGSEYSRPSPRAPEAIR
                     RLAAVFDSVPIR"
     regulatory      complement(6317..6429)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT         1105 a         2320 c         2260 g          853 t
ORIGIN      
        1 cggagcacct cttccagctt gcctaccgcc tcaagggaga cgtaccggtc tcgctcgact
       61 gactcgatca ggccccgccc cacggccatt cgaatggcgc ctggcaggtc cttgaggtga
      121 agcaaccccg ccagctcgga ccgggtgggc ccctccaacc ccgcggcccg caccgcggca
      181 accacctgat ccacctcgcc ctcaccaccc gctgaggccg gctggtgtcc ggcgagggcg
      241 gcccgtccag ccaccacgcg caccttttcc tccagtacca gctcccggag gagattgtct
      301 gttagccagg agagcgtgcc cagcccgctt cgcagggtct cgagtgactt gccggttgcg
      361 accggatccc gccggtggaa ctccgccagg tcggtcagga cggtctggcg ggcgtcttcc
      421 acccgctgct gaagcagcag gcgcccgagg gtgcgggtca cgccgggagt gctggagacg
      481 acggcggacg ccccggcgcc cagcaaccga gcgatggcct cgacctcgac cccggcggga
      541 cgacgcgtca gcagggcccg gagccgggct gccggctggt gcgcagtcag atcctcgggc
      601 cagggagcct tccggggcgg ctccggatcg gcgatccagc cgccgccgat ggtggtgacc
      661 gggctgtagc tgcgaatcac gaagcggtcg ccgccccgga ccaccagtgg ggtctccgga
      721 accactcgcg cagggccgct tcgaccgggt tcgatcggct gccgcggata gacccgcgcg
      781 atggcctcgg cggtaccgtg atgcacccgg acccgggctc gggtaatgag cggccggggc
      841 gcgcctccca ggagggcaat ggaggcatcg aacaccgtgg tgggctgcca ctcgcccgtg
      901 cctaacagga cctgaccccg gcgcagcgcc cccacttcca ccccgctcag cccgaccgcg
      961 gtccgggagc ccgggaccgc ggcgtccacc gcgcggccga atgactctac cgagcgcacc
     1021 cgggctcgaa gcgaccccgg ctcgatccgc acctggtcgc ccacccgcac cgagccgctc
     1081 cacagtgtgc cggtcaccac cggtccggtg cccgcgatgg cgaaggcgcg atcgatggga
     1141 agccggaaca gatcagagag tgccgaatgc ccaatagcga gggcagaagt agcggcgctg
     1201 cggagtttgt ctcgcaacgc atccattcct tcgcccgtga ccggcgacac gcgaatgggc
     1261 gggcgaaagt cgacgctgga ttgctccagg cgatcaacca ggtccccggc gaccaggtcg
     1321 acccagtccg gctcggccag gtcgatcttg gtgatgaccg gaattccgcg cgggatgccc
     1381 aactgttcga cgatggcgag atgttccagc gtctggggcc gaatcccttc caccgcgtcc
     1441 acgaccagca gcaccagatc gatcccggtg gctcccgcca ccatggtgcg gacgaagtcc
     1501 tcgtgacccg gcacgtcgac gatgccgatc ggcgccagcc cctccagctc gagcggcgca
     1561 aaattgagct cgatggtgat cccgcgccgc cgttcctccg ccagccgatc catgctgcga
     1621 ccggtcaggg cggcgaccag ggtggacttg ccgtgatcga tatgccccgc ggtgccgatg
     1681 atcacccttg cccccagggt tcccgcaacc agaagtcgag ggccgggagg ttggcccctt
     1741 cggccacctg gtggtgaatg aaacgagcca gcaggcgccg gtgggcggtg gcgtgacggg
     1801 gatcgagccg ggggagcgcc gcgtccgggt cgagcagtac ggtgagatcg gcgcggtctt
     1861 cggccggcag ccagttggcg gcccgggatc gggcgcagtc ggggcagagc gcgccgccct
     1921 ccgacacgct gaacgccatt ggaacgccgt tggggatcag cgtgccatcc agcgcgcagc
     1981 cggcgagcgc gggctcgaac cccagcaggc acacgatgga ccagagccac ttgaggccga
     2041 gcacctcggc ggcttcgggt gaggcgtgtt ccagctcccg aatggcctga tccagcgcgt
     2101 cgaagatctc ggggtgagga tcggccgagc cgacccgctg gaccagctcc gccatggcga
     2161 tcgcggccgc aaagcgctcc agggcggcac cgaccgcgag gggcagatgc tggagatcga
     2221 aggcggtgag cgtgtgcagc tcgccgtgtc ggggaggcag gtactgcgcg gtgccccggc
     2281 tcagcagttg cagcgcggcg ccgaaccggc tgcggggccg cagcgcccct ttcgcgatgg
     2341 cgctgacgat gccgcgatcc cgggtggcaa gccggacgat cttcgacgtt tcaccatagc
     2401 ggatggcgga gagcacgatc gcttcggact gcagggcagc cacggaggtc aggtcgcctc
     2461 gagcagggtc tccggcggaa tcaaggcggt agtggcgacg ccggcgcagg ggcccagtgt
     2521 gatgggccgg atttcggtga ggtcctgccg gaacacccga gcccggccgg ggagaccgcc
     2581 gccgcagtgt ccggcttcga tgccgtaaat ctgattccgg gtatcgatcg ccacgccgac
     2641 attctcgctc agcgggaggc cgttacctgc cccgcgaatc agggttcggg tgcgggtatt
     2701 gaactccatc agcccctcgg tgcgcgagct caccatgatg cgttcgccgg catccgccgc
     2761 aatgggaccg ggcgcttctc cgaaaccgcc gaaattcccc acttcggcgc gcaggaccgg
     2821 atccacgatg gagagccggc cctcgggcga cgcggggccg cccatctgta tgacgtagag
     2881 ccgtccgtcg gccccgatgg tcgcgtagcg ggcgtgaccg ggaccaggga gagcaatcga
     2941 atcacccggg gcggcccgtg tattggtgat gggatcgacc acggtaaccc agctctcccc
     3001 ggcgggacac cagccgtcgg ggggaggaca ttctaccaga ttggcattga cgacgaacag
     3061 cttaccccgc gcgatcgcga cggccttggg cgtgtgaccg accgcaatgc tcagcgtgtc
     3121 acccgattcc aggttgagcc gcatcagtgc gtcccggccc gacaaggcta cgtaggcgat
     3181 ggagtcgttg aacaccaatc cgcccagcgc accggcccct tcaccgaccg cgatggtgcg
     3241 cgacacccgc cgccggatca gatcgaccac cgccaccgta tcgccccgcg ccactgccag
     3301 gatggcgaag cgccggccgg ccgcgggacg ggcatcctcc ggaacggcat gacccagcgg
     3361 gatctgggtg atccccacgc cttgggagag ctggacataa ctgagggtct cgaaccccgg
     3421 attggcgacc agcagcagtt cctggggcgg cggcagaggg gcggtggttt cggagcagga
     3481 agccacggct gcaagcagaa tcgtgatgct gaaccgcatg gcctgaaaat aaccggtcga
     3541 aggggtcgaa ggagtcgaag gagtcgaagc agtcgaagca gtcgaaggag tcgaagcagt
     3601 tgaaggcggt cgaggagggt caaccgcctt cgaccccctt cgacccgctt cgactgcctt
     3661 cgacggggcg tagcgccacc agctgcggcc aaccctccca ctgagtcacc gcgatcggcc
     3721 acccgaagac ctggctgacc acctccgccc ggagcacttc atcgggcgtc ccggatgcca
     3781 ccacccggcc ccggtccagc agcaccatcc ggtcggcgta gcgggcggcg aggttgatgt
     3841 ggtgggtgat gagcagacag cccagcccat cgtccaccag ctgccgcacc agctccatca
     3901 cttccatttc gtgccggatg tcgagcgccg cgcccggctc gtccagcacc agggcccggg
     3961 gctcctgcgc cagcgcccgg gccaggcgga cccgctgcca ctcgccgccg gagagaccgt
     4021 ccacctgccg ttggcgcagc tcccacatgt cgcagcgttc cagcgcgcgg cggccggcgg
     4081 cacggtcctc gggaccgatc ggggtcagcg ctcccaaccg gggatagcga cccagcagga
     4141 cggtctcttc cacggtaagc gggatccagg cttcctcccg ctgcgcaacg acacccacaa
     4201 accgcgccag ctccggccgt ttccagagtg cgacgggacg gccatccacc agggccgccc
     4261 cggattcggc cgccactgtg ccgagcagcg cccgcatcag cgtcgtcttg ccgctgccgt
     4321 tggggccgac cagcaccacc agagtaccgg actcgaccgc gagcgacgcg ccgtccaggg
     4381 ctcgggccgc ggcgccgcgg tatcgcaccg acagatcgcg ggcctccaac atcatcgcag
     4441 gctccgccgc agcatcaggg cgaacagcgg cacgccgatg gtcgccgtca ccacgcccac
     4501 cggcagctcc agcggctgca ccacccagcg ggccaatcca tcggccagca ccaggaagct
     4561 gccgctggtg agaatcaccg ccggcagcag ccgcccgtgc agcggcccca ccacccgccg
     4621 catcgcgtgg ggcaccacca ggcccacgaa gccgatcacc ccgcacaccg ccaccgcggc
     4681 cgcggtcagc aacgacgccg cgaagtacac cacccgcttg gttcgttcga cgtcggcgcc
     4741 gagatactgg gccggctctt cgcctaacgc cagcagatcg agctcgcggg cccggagcag
     4801 cagcaacccg gcggggacgg ccgcgtaggc cgcgtagatc ccgagcgcct gccagctgga
     4861 gccgctgaac ccgcccagca gccagagaaa cgcattgcgc agctggggcg cgggaaccag
     4921 cgtgagaatg gccgacatga tggcgccggt gaaggcgctc accactaccc cggcgagcag
     4981 gaggatgcgg ggatcgagcc gccggccggc caccaccgcc agccgataca ccagcgccac
     5041 ggcgatcagt gcgccggccc acgccgctac cggcagggcc cacggattgg cggtgaagaa
     5101 ggcgatcgcg aggaccgcgc ccaggccggc gcccccggag agccccagga ggtaaggatc
     5161 ggccagtgga ttacgcacca gcgcctgcag gaccgcgccg gtgagtccca ggccggcccc
     5221 gaccccgaag gccagcagca ctcgcggcgc ccgcagattg agcaggatgg tcccttcggt
     5281 cgaggccggc tcggcgatgg cccggagcag gtcgtccggt cccagcaggg tggcgccgag
     5341 gtgcagcccg accaccaggg acaccagcgc gatcgccgcc aacccgaaca gcctgccggt
     5401 caccggatcg gcaccgaatc gaacacggcg gcgagacgcc ggatggcctc cggagcccgc
     5461 gggctgggac gggaatactc cgacccgagg accgtggtga accggcgata cttgaccgcc
     5521 gggatgacct gccattcggg ccggcgggcg aaggtggggg actccgacgt ggtgagaatc
     5581 agatccggat tccgggcggc aatggcctcc aggctcaccg gtgccgcgga ggaggcgaca
     5641 tcggcgaata cgttccggcc gccggccatt tccaccagct catgcaggaa gctgccgcgt
     5701 ccgatcgtca tgggtggctg atcccaggcc agcaccagga tccgcggtcc gccggcacgg
     5761 ccccgctgat cgaccgccgc caatgccgag tcggtcgcgg ccgtcagcgc cgcggcatcg
     5821 accgcgtgac cggtagcctg tcccagcagc gcggcgttgc ggttgaggtc ggtgaaggtg
     5881 tcggtgcgaa gctgcagggt ggcaatcccg aatcggcgca gctgctgaac cgcctgggcg
     5941 ttccgggcgg aacgatagag caccaccaga tcgggttgta ccccgagaat ggcttcgacg
     6001 ttaggcgcga gcccgtcgcc cagatcggtg acccggcggg cctgggcggg ccagtcgcac
     6061 cacttggtgc gccccacaac ctgggaaccg gccccgatgg cgaagagcaa ttcagtgctg
     6121 gcaggcacca gcgaggcgac ccgccgggcc ggctgggcca ggcgtacggt gtcgccggcg
     6181 tcgtcgagca gaacgatggg accggaagag gccggtggcc gggcacaggc cgccagccaa
     6241 gccaggagca gggccacaac tcgcatagcc accttcccct cccgcgaggg acacgtgtgg
     6301 tggcacgggt gaggaggtct cctggcttcg ggcatctgct cggccttccc ggaggatccc
     6361 agtggcgtcg agcagtctga ccagcgcccg ttacagtggc ggggccgcgc cggacttaca
     6421 ccggcttccg gttcccgcac ccgtgatgcc ggtcagaagg gaccggcagg cgcgaactta
     6481 tcggggtggt tcccgggcag caagggcggc actgagcacg gctttgagcc gggcccgt
//
LOCUS       DASWKS010000242         3095 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2351462, whole genome shotgun sequence.
ACCESSION   DASWKS010000242 DASWKS010000000
VERSION     DASWKS010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2351462"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..393
                     /locus_tag="VGA78_07055"
     CDS             46..393
                     /locus_tag="VGA78_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893665.1"
                     /translation="MRHTLALTLLAGLATLPACSKSPAAPVDPMAKAFVEVQNQSFYD
                     MTVYAIRSGTRVRLGQVSGHSTATFELPRTMVNPGVPIRFQADPVGSNNTPFSQEIGI
                     SPGDTVVLRIPPS"
     gene            complement(403..1731)
                     /locus_tag="VGA78_07060"
     CDS             complement(403..1731)
                     /locus_tag="VGA78_07060"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9893666.1"
                     /translation="MSGSTTPSASPSVRLPGYAWYVVGVLTLANVSAYVDRQILTLLV
                     RPIKRDLVLSDSEVSLLGGLSFALFYTLLGFPIARLADQRSRRAIIAAGVAVWSVMTA
                     LCGAARSFAQLLLARVGVGVGEAALSPPAYSLIADYFPRERLGTAIGVYTMGVYLGVG
                     LAQLIGGLVIAAVGGEELWRLPLLGAVRPWQVAFLVVAVPGVLLAFLMFTIREPRRGA
                     PVPAAVSVGEVIGYLSSNARTVVPHHVGAALIALVNYGYGFWLPTFFERTYGWTASQA
                     GYLLGAANLTFGIAGVSLAGRLADRWQERGMADAKIRVCLIAALGLVICDVATPLMPT
                     GSLAALWIFPLSFFASAPFGVAAAAVQEMVPARMRAQASAVYLFVISLLGLAAGPTAV
                     ALATDYLFRSEALVRYSMVVVAIGGLAPAALLLSRARAPYRAMVSSVPSR"
     gene            complement(1728..>3095)
                     /locus_tag="VGA78_07065"
     CDS             complement(1728..>3095)
                     /locus_tag="VGA78_07065"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893667.1"
                     /translation="DLGGLILAPGFVDIHSHADSLMLEDPRVESVIRQGVTTVIVGQD
                     GGSRRDLAEWFARLAEVRPAVNVASMVGLGSVRSAVVGPDDRRATSDELEQMVGLVQT
                     GLEAGACGASSGLEYPPGAFAPREELIALCRPLAARRLPYATHMRNEDDRLLDAVDEA
                     IAVAEGARCPLQVSHLKAQGPRNWNKMDDALERIEKARKHGVDAAFDIYPYIAYQTGL
                     TNLFPLWSRDGGTEAFLGRLGDTAHAERIRTETLAKVELIGGWNNVLISSVAEGDKTA
                     EGGRLGDTAAAQGQQPYPFAVALLRQARGQVGMVGFAMSEENVERGLKHRLAMVCSDG
                     SAVAVDGPARRGHPHPRGLGTFPRVLGRYVRERRTLKLEDAIHKMSARPAERVRLMDR
                     GRVAPGLVADLVAFDPERVADRSTFQDPFQYPDGIRLVLVNGEIVLRDGQRTPAQPGK
                     AVRPA"
BASE COUNT          549 a         1108 c          994 g          444 t
ORIGIN      
        1 ccgttatcat gatcattcca ccgtcctgag gcgcaggtga ccaccatgcg gcacacccta
       61 gctcttacgc tcctcgccgg gctggcgacc ttgccggcat gctccaagtc cccggcggcg
      121 ccggtcgatc ccatggccaa ggcgtttgtc gaggtccaga accagtcctt ctacgacatg
      181 accgtctacg ccatccggtc gggaaccagg gtcaggctgg gtcaggtgtc gggtcactcc
      241 accgcgacgt tcgagctgcc gcgcaccatg gtgaatcccg gcgtgccgat tcgtttccag
      301 gccgatccgg tgggcagcaa caacaccccg ttcagccagg agatcgggat cagtccggga
      361 gatacggttg tgctcaggat tccgccctcg taaccctggc gactagcgac tggggacact
      421 ggataccatc gcccggtagg gtgcccgggc gcggctcagc aacagggccg ccggcgccag
      481 gcctccaatc gccacgacca ccatcgaata tcgaaccagc gcctcgcttc ggaacagata
      541 gtcggtcgcc agggcgacgg cggtcgggcc ggccgcgagg cccagcagtg agataacgaa
      601 caggtagacc gctgaggcct gagcccgcat tcgagccggg accatctcct gtaccgccgc
      661 cgcggccacg ccgaacggtg ccgaggcgaa gaagctgagt ggaaagatcc agagggcagc
      721 cagcgatccg gtcggcatca gcggtgtagc cacgtcacaa attaccagtc ccaaggccgc
      781 gatcaggcag acccggatct ttgcgtccgc catgccgcgc tcctgccagc gatccgccag
      841 ccggcccgcc agcgacactc ccgcgatccc gaacgtcagg ttggcggcgc cgagaagata
      901 gccggcctgc gaagcggtcc agccataagt tcgctcgaaa aaagtgggga gccagaaccc
      961 atagccgtaa ttcaccagcg caatgagggc ggcgccgacg tgatgcggca cgacggtgcg
     1021 ggcgttgctc gagagatagc cgatcacctc gccgaccgag accgctgcgg gtacgggagc
     1081 accgcgacgg ggttcgcgga tggtgaacat gagaaaagcc agcaacacac ccggtaccgc
     1141 caccaccagg aaggccacct gccagggccg cacggcgccc aggaggggca ggcgccagag
     1201 ctcttccccc ccgacggccg cgatcaccaa cccgccgatc agctgggcca gccccacgcc
     1261 caggtacacc cccatggtat acacgccgat ggcggtgccg agccgctcgc gggggaagta
     1321 atccgcgatc agggagtaag cgggcgggga gagcgcggct tcgccgaccc cgacgccgac
     1381 ccgggccagc agcagctgcg cgaagctcct ggcggcgccg cacagcgcgg tcatcacact
     1441 ccagaccgcg acaccggccg cgatgatggc gcggcgactg cgctggtcgg ccagccgcgc
     1501 gatggggaat cccagcagag tgtagaacag cgcgaacgag agcccgccca gcaggctcac
     1561 ttcggaatcg ctgagcacca ggtcccgttt gatcggccgg accagcaggg tcaggatctg
     1621 gcgatcgacg taggcggaca cgttcgccag cgtcaggacc cccaccacgt accaggcata
     1681 gccgggcagc cggacggacg gactggcgga cggggtggtg ctgccgctca cgcgggtctg
     1741 accgccttgc ccggctgggc cggggtgcgc tggccatccc gcagcacgat ctcgccgttg
     1801 accagcacca gccggatgcc gtcggggtac tggaacgggt cctggaaagt ggaccggtcc
     1861 gccacccgct ccggatcgaa cgccaccaga tcggccacca gcccgggcgc gacccggccg
     1921 cggtccatca gccgcacccg ctccgccggc cgggcgctca tcttgtggat cgcgtcctcc
     1981 aatttgaggg tgcgccgctc ccgcacgtag cgacccagca cccgggggaa ggtgcccagc
     2041 ccgcgcggat ggggatgacc ccgccgagcg ggtccgtcca ccgccacagc ggatccgtcg
     2101 ctgcagacca tggcgagtcg gtgtttgaga ccgcgctcta cattctcttc gctcatcgcg
     2161 aagcccacca tgccgacctg gcctcgtgcc tggcgcagca gcgccaccgc aaaggggtag
     2221 ggctgctgtc cctgggcggc ggccgtgtcg cccaggcggc caccttccgc cgtcttatcg
     2281 ccctcggcga cgctggagat gagcacgtta ttccagccgc cgatcagctc caccttggcg
     2341 agcgtttcgg tacggatcct ctcggcgtgc gccgtgtcgc ccagccggcc cagaaaggcc
     2401 tcggtgcccc catcccggct ccacaagggg aagagattag tgagcccggt ctggtacgcg
     2461 atgtagggat agatatcaaa tgccgcgtct acgccatgct tgcgggcctt ttcaatccgc
     2521 tcgagcgcgt cgtccatctt gttccagttg cggggaccct gagccttgag gtgggagacc
     2581 tggagcggac acctggctcc ttcggccacc gcgatcgctt cgtcgaccgc atcaagcagc
     2641 cggtcgtcct cgtttctcat gtgggtcgcg tacggcaacc gtcgcgccgc cagaggccgg
     2701 cacagcgcga tcagctcttc ccggggcgcg aaggcgcccg ggggatactc gagccccgag
     2761 gaggcgccgc aggctccggc ctcgagaccg gtttgcacca gccccaccat ctgctccagc
     2821 tcgtcgctgg tcgcccgacg gtcatcgggg ccaaccaccg cactgcgcac cgatcccagt
     2881 cccaccatcg aggcgacatt gacggcgggt ctcacctcgg ccagccgggc gaaccactcg
     2941 gcgagatccc gccgcgagcc tccatcctgt cccacgatca cggtcgtgac gccctgccgg
     3001 atcaccgact cgacccgggg atcttccagc atcagactgt ccgcgtgcga atggatatcc
     3061 acgaatcccg gcgccaatat caggccgccc agatc
//
LOCUS       DASWKS010000243         3339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1604821, whole genome shotgun sequence.
ACCESSION   DASWKS010000243 DASWKS010000000
VERSION     DASWKS010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1604821"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VGA78_07070"
     CDS             <1..268
                     /locus_tag="VGA78_07070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEX9893668.1"
                     /translation="GANYRSACRAQSPQAFVAKLSIALEEADEVLFWLRLLVRIELAG
                     KDSVRPIANEANELVKIFVASRKTMMNRIGRKASSRQSSIVNRQ"
     gene            complement(255..1139)
                     /locus_tag="VGA78_07075"
     CDS             complement(255..1139)
                     /locus_tag="VGA78_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HEX9893669.1"
                     /translation="MTGSRSIKVGLVQRTGGEDVSANTRATAEGIREAAARGATIVST
                     QELYRSRYFAQTEDHDFFALAEPIPGPTTAALQDLAAELGVVLVASLFEKRAEGLYHN
                     TAAIIDGDGTYLGKYRKMHIPDDPQYYEKFYFTPGDLGFRVWDTRVGRIGVLICWDQW
                     YPEGARLTALQGAEILFYPTAIGWLPAEKAEYGERQQSAWETIQRSHAIANGVFVAAA
                     NRVGFEPSPGGGIEFWGGSFVADPSGRVLGKAGATEEVLVVDCDLSQVDMARTHWPFL
                     RDRRIEAYGDITKRFIDD"
     gene            1544..>3339
                     /locus_tag="VGA78_07080"
     CDS             1544..>3339
                     /locus_tag="VGA78_07080"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX9893670.1"
                     /translation="MVTRVLWRSAFAMAALLLAPGVLAAQDRQISGRVTRAGGTQPLD
                     AEISVVGQLRYRTARTNPEGRYTINAPQGEVRLMFRAIGYARVEVIVPAGTATHDVQM
                     EADVFKLSEVVVTGQATSVERRSATTAIAYVSGEDIAKVSSPTIENALTGKVSGVNLQ
                     SNSGAPGGGIQMQIRGNNTILGAFDPLYVIDGVIYSNARVLSGRASVNAGAFVQEDDP
                     VNRVADINPADIASIEILKGAAASSIYGSKASNGVVVITTIRGQAGRPRINVAQRVGV
                     FSPLRQLEGRRFTQAEAVEVFGAAANKYFANNPNPYFDHYDQVFSQRDLSYETVGDVS
                     GGSETTRYFISGTWKRDEGIEPNTGFTRQGLRVNVDQTLSSKLEVKISSVYNRAEHTR
                     GWNNNCNNFGCHGYALAYTPSFVDLTARNADGTFPAPDWGVQSNPIQTTELARNLEQT
                     NRFTGGLNVIWQPIQSDRHSFKFVAGGGVDAFDQNNDIWTPNELFWEATQAQPGSAIE
                     GNADSKYYNWNLNGVHVFHTGTWSATTSLGLQFEDRRLKTARATTTNLIPGQQNVGQG
                     TTTTSFETLTEERTLALYAQEEVRLFDDRLLV"
BASE COUNT          631 a         1125 c         1026 g          557 t
ORIGIN      
        1 cggggcaaac tatcggtccg catgtcgggc acagtcacct caggcattcg tggccaagct
       61 ctctattgcc ctcgaggagg ccgacgaagt gctcttctgg ctccggctcc tggtgcgcat
      121 cgagctggct gggaaggaca gcgtcaggcc gatcgcgaac gaagcaaatg aactggtgaa
      181 gatctttgtt gccagtagga agacgatgat gaataggatc ggaaggaagg cgagcagtcg
      241 tcaatcgtca atcgtcaatc gtcaatgaat cgcttggtaa tgtccccgta cgcctcgatc
      301 cgccgatccc gaaggaaagg ccagtgggtc cgcgccatgt cgacctgaga caggtcacag
      361 tccaccacca gaacttcctc cgtcgccccc gccttgccga gaacccggcc actcggatcg
      421 gccacgaagc tcccgcccca gaactcgatc ccgccgcccg ggctcggctc gaagccgacc
      481 cggttggccg cggcgacgaa gaccccgttg gcgatggcgt ggctccgctg gatggtctcc
      541 caggcactct gttgccgctc gccgtactcc gccttctcgg ccggcagcca cccgatggcg
      601 gtaggataga acaggatctc ggccccctgt aaggcggtga ggcgggctcc ttcgggatac
      661 cactgatccc agcagatcag caccccgatc cggcccaccc gggtatccca gacccggaac
      721 cccaggtcac ccggggtgaa gtagaacttc tcgtaatact ggggatcgtc cgggatatgc
      781 atcttccggt acttgcccag gtaggtcccg tcgccatcga tgatcgcggc ggtgttgtgg
      841 tagaggccct cggcccgctt ctcgaacagg gacgccacca gcaccacgcc caactcggcc
      901 gcgaggtcct gcagcgccgc cgtggtgggc ccagggatcg gctcggccag cgcgaaaaag
      961 tcatgatctt cagtctgggc gaagtagcgt gaccggtaga gctcctgggt cgacacaatg
     1021 gtggcgcccc gggccgccgc ctcgcggatt ccctcagcgg tcgcccgggt gttggccgat
     1081 acgtcctccc cgccggtccg ctggaccagt ccgaccttga tggagcggga accagtcatg
     1141 aaggcaaaac taatggcacg gggccgctcc ttgcgcctcc ctcatcccgg acgatatttg
     1201 cctgtcactg aacccgctct tacaccgcag gctgtgcttt cgacacgccg cccggcttgg
     1261 actcgtgtcg aaaccacacg atagccgtcc gccccccgtt aatccaagcg gcttataccg
     1321 caacgggtta gcaggcaacg ccggcagggc gtggttcatg caaactgacc aaaccgtcac
     1381 gcagcacata acgcacggct ctcgggtcgt cgagtcctga tgctttcgcc cgccttttcg
     1441 cgggcggagg tgggcggttc aggtctggcc tcgaccacgg gaggacggac ttgcaggtgt
     1501 tcccgctgtt ttgatggaaa cccttattgc atgcggagga cttgtggtca cacgtgttct
     1561 ctggcggtcg gcctttgcga tggcagcgtt gctgctggcg ccaggggtac tggctgctca
     1621 ggaccggcag atctccggcc gggtgacccg ggcggggggg acccagccgc tcgacgctga
     1681 aatcagcgtg gtcggacagc tcaggtaccg gacggcccgt accaatcccg agggtcgtta
     1741 caccatcaac gcgccccagg gcgaggtccg cctgatgttc cgggccatcg ggtacgcccg
     1801 ggttgaggtc atcgtcccgg ccggcaccgc cacccacgac gtccagatgg aagcggacgt
     1861 cttcaagctg agcgaagtcg tggtcaccgg gcaggccacc tcggtcgagc gccgcagcgc
     1921 caccacggcc atcgcgtacg tcagcggcga ggacattgcg aaggtttcct cccccaccat
     1981 cgaaaacgcc ctcaccggca aggtgtcggg cgtcaatctg cagtccaact cgggtgcgcc
     2041 gggcggcggc atccagatgc agatccgggg caacaacacc atcctgggtg cgttcgatcc
     2101 gctctatgtc atcgacggcg tgatctactc caacgcccgg gtgctgagcg ggcgggcctc
     2161 ggtgaatgcc ggcgcgttcg tccaggagga cgacccggtc aaccgggtgg ccgacatcaa
     2221 cccggccgac atcgccagca tcgagatcct caagggcgcc gccgcgtctt cgatctacgg
     2281 ctccaaggcg tccaacggag ttgtggtcat caccaccatt cggggccagg cgggccggcc
     2341 tcggatcaac gtggcacagc gggtcggcgt gttcagcccg ctgcgccagc tggaaggccg
     2401 acggttcact caggccgaag cggtcgaagt cttcggtgcg gcggcgaata agtacttcgc
     2461 caacaatccc aatccgtact tcgatcacta cgaccaggtc ttcagccagc gggatctctc
     2521 gtacgagacg gtaggcgacg tcagcggcgg gtcggagacc acccgctact tcatttcggg
     2581 cacctggaag cgggacgaag ggatcgagcc caacaccggg ttcactcggc agggtctccg
     2641 ggtgaacgtc gatcagacct tgagctccaa gctcgaggtg aaaatcagca gcgtctacaa
     2701 tcgggccgaa cacacccgcg gctggaacaa caactgcaat aacttcggct gccacggcta
     2761 tgcgctggcc tacaccccca gcttcgtcga cctgactgcc cgcaatgccg acggcacatt
     2821 ccccgctccc gattggggcg tccagtccaa cccgatccag accaccgagc tggcccgcaa
     2881 tctggagcag accaaccggt tcaccggcgg actgaacgtc atctggcagc cgatccaatc
     2941 cgaccggcac agcttcaagt tcgtggccgg cggcggggtc gatgccttcg accagaacaa
     3001 cgacatctgg acccccaacg agctgttctg ggaggccacc caggctcagc ccggcagcgc
     3061 gatcgaaggc aacgccgaca gcaagtacta caactggaac ctgaacggcg tccatgtgtt
     3121 ccataccggc acctggtcgg ccaccacgtc cctgggcctc cagttcgagg accgccgcct
     3181 caagaccgcc cgggccacca cgaccaacct gattcctgga cagcagaacg tggggcaggg
     3241 caccaccacg acgtcgttcg agaccctcac cgaagagcgg accctggcac tgtacgccca
     3301 ggaagaggtc cggctgttcg acgaccggct gctggtgca
//
LOCUS       DASWKS010000244        23589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_849438, whole genome shotgun sequence.
ACCESSION   DASWKS010000244 DASWKS010000000
VERSION     DASWKS010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 23589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849438"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1469)
                     /locus_tag="VGA78_07085"
     CDS             complement(162..1469)
                     /locus_tag="VGA78_07085"
                     /inference="COORDINATES: protein motif:HMM:NF017000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lanthionine synthetase LanC family protein"
                     /protein_id="HEX9893671.1"
                     /translation="MLPRRHFLIAALAAPPLAEIVRKLGLTDRPWLDAALKAEKWIRR
                     SRQTTGSGIAWPADPLRPDSVSPDLYNGMPGVVLFYLELFKTTGQNHFLHEAELGARQ
                     LASRLPQSAGLYTGLAGTAFVLERTATIGGRSEFTHASLRCTALLLDQATAEGDGVQW
                     NDTTDIIAGSAGIGLTLLMLEPSLGGPRARELAVLAGRRLLELGTPAEGGLTWMMNPT
                     FPRNMPNFSHGTAGVAYFLARLHALTGEAMFLDGAKAGARYLQAIAAPKGAGVVIRHH
                     DGDGEQLFYLSWCHGPAGTARLFHQLALVDPGFRPWVARLARGIPALGVPRRSDGFWN
                     NISQCCGNAGVVQFALDRARTHRDPGALEFARQVTADLMQRATPDRDGLKWVQAEHRV
                     QPENLVAQTGFMQGAAGVGTVLLHLDAAERGDDWSITFPDSPF"
     gene            1499..2500
                     /locus_tag="VGA78_07090"
     CDS             1499..2500
                     /locus_tag="VGA78_07090"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HEX9893672.1"
                     /translation="MRAIVVHRFGGPEVLSLEEAPDPALLPGQVLIRNHAAGVNPVDA
                     YTRAGSYARLPRLPYIPGWDGAGEVEAVGEGVAGFKPGDRVYFSGTASGRSQGAYASR
                     VCSTRDQVHRLAGRLSYAQGAAIGVPYTTAHRALFHRGRTRPGETVLVHGASGAVGVA
                     TVQLARAHGCTVLGTAGSDAGLELVRAQGASHALRHGGSDTTAQVLSLTGGRGVDVIV
                     EMLANVNLDRDLGMLAVGGRVLIVGNRGRIEIDPRQTMAKESAILGVMLWHAGDEELA
                     GVHRQIATGFEDGSLTPVVGLVLPLAQAGRAQEIVFEGGAKGKVVLDVTGEALLPTR"
     gene            complement(2490..3461)
                     /locus_tag="VGA78_07095"
     CDS             complement(2490..3461)
                     /locus_tag="VGA78_07095"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEX9893673.1"
                     /translation="MSKNSTRLLGLAAGLTFVTSALPAQTKVFPWPGDPSWSPWTIAS
                     GGAEITGANPRHGNGSLALSTTGGLSDWGFYVHLSGDNPWGQLGDLSALSFEWYRTGL
                     TPQDPNLPYIPVWPDAPWLAQTPVLRLLLGQEINGSLVMSELVWEKYYTDGSPTTNDE
                     WVAEDLMDQYFWHAMGGTQYWVNSQCQAQTGPFVPDGQNPPSVWDGGLLLGTPTGWAG
                     GSFVDPNATGACAQSGFNLGDASIYGVALGVGSNWPDQYQGYVDWLQLTFNGGEETGE
                     FAVWSNFELPETTVPEPGSMALLATGLVGLGIAGLRKRKKQSTNSTE"
     gene            complement(3757..4830)
                     /locus_tag="VGA78_07100"
     CDS             complement(3757..4830)
                     /locus_tag="VGA78_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893674.1"
                     /translation="MNPLPFILLLLITLAWALLPLLPALWEFFRPTDVEPLTMVGRDN
                     ADISRFARHFREYLQGQLEQYPPRNGVEDHQTGTLPDGTPFIRTARLSNELSRSGLPE
                     ESATRLVVLDQTTVLDNGDQFKYEVWAREDVFGSPRATYRAILGEKNVELGERSVILR
                     WLHSVGTLVVGPASHLYGRASAEESIQFGREVHFERVGAPVITVGIATPRPMPPRHTE
                     PASFLPPPNSRRLGDHLRVDADLTVPAGTLIDDNLVVAGQLTLGPGARVTGSVKSHRT
                     LTLESGTVVEGSLVSRGEITIGQDCWIRGPVISEERLEIGRGTSIGSPNAPSTVSGRQ
                     VFLADGVTVSGQIVTSEGGQTAD"
     gene            complement(4827..6101)
                     /locus_tag="VGA78_07105"
     CDS             complement(4827..6101)
                     /locus_tag="VGA78_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9893675.1"
                     /translation="MIRNLLAAGLWVVVAILVIYTLRHYIFTLNRVFGRHRQPYVDIG
                     MGDWPEVAIFVPCHNEEKVIGGMLDALLAADYPKDRFFIVPINDRSTDGTAEIIDRYA
                     AEYPGRVRPYHRKEGKPGKAAALKEATDRSDTGIFLVFDADYLPGPNLLRQLVAPFFD
                     PSVGAVMGRVVPHNLNRTLLTRLLDLERSGGYQVDQQARMNLHLIPQYGGTVGGVRRS
                     ALLDAGNWNEDSLAEDTDITYRLILRGWEVVYQNRSECYEEVPENWPTRIRQIQRWTR
                     GHNQCLRRYAFQLLKFPKHLRFWQVIDGVLLLGVFAVAPILLLGWVFATSLFFMGYQF
                     SQSLVVLFAVASYSTLGNFAAFFEVATACRLDGSRNRIRLLPFLSLGFLVNLLAISRA
                     TLSRRSWLAVPRAGPRWEKTERYRNANTVGKV"
     gene            complement(6098..6949)
                     /locus_tag="VGA78_07110"
     CDS             complement(6098..6949)
                     /locus_tag="VGA78_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893676.1"
                     /translation="MAFSGTGKSLLPLGGGIEDLRLRGAKGGVIRKHRAMVGLEWSTT
                     RVGRAVLLSLVFTAGVIVALPWLGRFYTMLYEELIWWIGLPAGVGVQEIRVGELLTIP
                     IPYFRLAAPWPLRFHWVVVGAATAIGLLLSFLLPVKYLPARYFIRFVALVQTVSLGFF
                     ALSSPPFLYPLPGYTAGMLTAGIAVLTLIPIVLGFSFYIFDHSLARQMLLTLLLLGHL
                     AVLLPLQVLIHAWLSHYLSALVQPTMFFVFGLLVEVLVFVAFYGWAMSWPGEEIPQTQ
                     PARRALR"
     gene            complement(6927..7706)
                     /locus_tag="VGA78_07115"
     CDS             complement(6927..7706)
                     /locus_tag="VGA78_07115"
                     /inference="COORDINATES: protein motif:HMM:TIGR04390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YaiO family outer membrane beta-barrel protein"
                     /protein_id="HEX9893677.1"
                     /translation="MTRRPGILVVLALAAGGVRPVTAQGPAGWLQAEAYYHRVTNDFG
                     DWKGVALRAVVPAGRRNIWYGDLLAQEAFDDRGVYAAVGNRHFFGPNWFTLASVGGGT
                     GDFVLPDLRADLAIGHAWLERKNLVTILGATYVNAKLGYEDFAVSGTLAGYFPGVTAE
                     IGGRINWSWPEAVRSERAYGALTLGRERNRLVVLRGGAGTEGYQLTGIVETQRSFSSY
                     EASISWREWLGGHGGVFAGGEWYDNPFYTRTGVTLGVFRHW"
     gene            complement(7703..8890)
                     /gene="wecB"
                     /locus_tag="VGA78_07120"
     CDS             complement(7703..8890)
                     /gene="wecB"
                     /locus_tag="VGA78_07120"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX9893678.1"
                     /translation="MTITDHLLGRASGRARFRIAIVLGTRPEAIKMAPVVRALEHRPD
                     VFQPMVIATSQHREMLAQAMTAMELHADLDLGLTHTNRTLAEFTAHALLALTQCFADV
                     KPDLLLVQGDTSTVVSAALAAFYQSIPIGHVEAGLRSGDMHRPFPEEANRRIASVATD
                     LHFAPTSRARDNLWREGIPPGDIYVTGNTVVDALAGVRPRTQFDDPALNRIDWKRRVL
                     LVTVHRRENLGEYLHALCGGFRRILARHADAQIVFPVHLNPRVREVVFAELRHVPGIS
                     LLEPLSYPDLLEVMRRSHFVLSDSGGIQEEAPSFRKPILILRTVTERPEVVDSGFGRL
                     VGTDPDVVFAAASQLLSDEAAYHRMVSGGNPFGDGHAAERIVSIIAERFGLPLANRMA
                     LQA"
     gene            9057..10241
                     /locus_tag="VGA78_07125"
     CDS             9057..10241
                     /locus_tag="VGA78_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX9893679.1"
                     /translation="MRLVPLVPLFTILAALPLSGQDRVRARDLGVAPGIFGPGAKNAI
                     TDVAGVRVGQSSMIAGDSIRTGVTAILPHGSNLFRERVPAAMYVGNGFGKLLGVTQVR
                     ELGELETPIVLTCTLCVWRAADALVEWMLEQPGMQNVGSINPVVGETNDGGLNAIRSR
                     PVGRDQVREALTRASDGPVAEGSVGAGTGTQAFGWKGGIGTSSRVLPARLGGWTVGVL
                     VQSNFGGVLQVLGAPVGKELGRYSYRASVGSERSERSEGSEDSGDGSIMMVVATDAPL
                     SDRNLERVAARAIMGLARTGSFASNGSGDYVIAFSTADAVRRKQGAGSREQGAGLPLV
                     ADLPNDDMSALFAAAVEATEEAIYNSLFMATTVESRIGRAEAIPLDRVREILKRYGVG
                     PK"
     gene            complement(10285..11178)
                     /locus_tag="VGA78_07130"
     CDS             complement(10285..11178)
                     /locus_tag="VGA78_07130"
                     /inference="COORDINATES: protein motif:HMM:NF014016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HEX9893680.1"
                     /translation="MYINVRAARVWLALLALGAPLSQADARQVGLLVVAHGATADWNA
                     QVRGTVAQVTWRLGPTATAFLMGPEAQSAGWDSAVARLTSAGVRSVVVVPLMVSSFGS
                     HYRQVRYYAGELDRLPAELAGHDHASRARPAVPMQVTPALDAAPELLEAVANRWSALD
                     LRLRTAPLVLLGHGPNDETDAERWTAAFHTALARVRQLGHSHESRSALLRDDAAPSVR
                     ADAIRRLRDSVTALADRAGDSVTVMTVLVARGEMTGVRIPKDLDGLPIRYVPTGLTPL
                     PAIARWIERVAGEAIVKTGSR"
     gene            complement(11293..12045)
                     /locus_tag="VGA78_07135"
     CDS             complement(11293..12045)
                     /locus_tag="VGA78_07135"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX9893681.1"
                     /translation="MKLRRPVIGIPTQTLQAMDGIPEGLPLSWVMNQRYYLVAAAVGG
                     VPWMIPLIEDLATLREIYDRLDGVLLAGGVDMNPATYGETRTPLCGAIDPARDQVELQ
                     LTRWAVAEGKPILGICRGLQVINVAMGGSLFQDVAAECDDAIKHDYFPTAGWQRDHLA
                     HDVTLTQDARLEQALGARRIAVNSMHHQGIDRLGEGLRVAAIAPDGLIEGIESPHHPY
                     LVAVQWHPESMATDHSFRILKPFIEVCSNSRT"
     gene            complement(12047..13159)
                     /locus_tag="VGA78_07140"
     CDS             complement(12047..13159)
                     /locus_tag="VGA78_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HEX9893682.1"
                     /translation="MTPQPPSLTIGIEEEYQIIDPKTRELRSYITEILKEDVVVLGEV
                     KPELHQSMVEVGTKVCRNPAEARAELVRLRKLVMELAARNGLAIVAAGSHPFSAWQTQ
                     EITPLERYMGVREDLQDLAQSLLIFGTHVHIGIEDREFLIDAMNVARYFLPHVLALST
                     SSPFWLGRQTGLKSYRSVIFRNFPRTGIPPEIGSWEDFEQLVETLVATNSIPNASKIW
                     WDVRPNWSYPTLEFRICDVNTRVDEAVCIAAIFQGIIAKLWKLRRDNLTFRIYPQELI
                     EENKWRAVRYGLDGNLIDFGKNREAPARELIHELLDWFLGDVLDELGSRAEAEYALRI
                     MDEGTSADRQVATWRRTGNLEDVVDQLIRETAEGVT"
     gene            complement(13156..14535)
                     /locus_tag="VGA78_07145"
     CDS             complement(13156..14535)
                     /locus_tag="VGA78_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893683.1"
                     /translation="MTIGVASPPSAAIAAWHDGLDGPVGRESALMLESELQGRGLFFG
                     DRALCTVLRPRFLTPSQYRLVRERCRLLLRAFDAAWTAAMTDPAVFAQFRLEAWETEL
                     VGSDPGRTAPSSLSRIDAFFNQAGSDFRVTEYNGETPAGSAYGDALSEIFLSLPSTRE
                     FLRTHLMWGLPARHHVLHALLDAWFAWSGRREAPSIAIVDWREVPTYSEFVLYDEFFR
                     AHGLASMIVDPEECEYGGGRLTARGRPVDLIYKRVLIHELVQRGGLNHPVIRAVRDGA
                     VCLANGFRCKLLHKKASLAVLSDERNASLFGPEERAAISRHVPWTRVVEERRTTVRGQ
                     PVDLVPYIMSERERLVLKPNDDYGGKGVVLGWESDAATWEAALRDALSQPCIVQERIE
                     LPVEPFPALGQGGAIELADRIVDTAPFVFNGAQVDGCLTRISTASLVNVTAGGGSTVP
                     TFVVEPRPR"
     gene            complement(14532..15464)
                     /locus_tag="VGA78_07150"
     CDS             complement(14532..15464)
                     /locus_tag="VGA78_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893684.1"
                     /translation="MTTRIGLLVGREWSWPPAFVEEIHRRNAGVSAEYVKLGAPRMDD
                     PAEYAVVIDRISHEVPFYRTWLKHAALRGASVINNPFMWSADDKFFGATLATSLGIAS
                     PRTALLPNKEYIPGIKHDESLRNLVFPLDWKAAVDYVGLPLVLKDAYGGGWRDVYICR
                     TMEELLQHYDASGQLTMIVQEFIQFEQFVRCICIGRDEILPIHYDPGERRYHVEPDYL
                     APRLRDQIVTESRALVRALGYDMNSIEWAVRGGVPYAIDFMNPAPDFDIHSLTPGYFE
                     WVIQKMADLTIRLAREPRTPPGPQSWNQLLQGRV"
     gene            complement(15513..16298)
                     /locus_tag="VGA78_07155"
     CDS             complement(15513..16298)
                     /locus_tag="VGA78_07155"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX9893685.1"
                     /translation="MSWTDYPLPIAAEGAPTLKRWRKLRSGELQNYRDIIVALPPSYQ
                     ESGRSYPVVVMHDGQNLFDPVASFAGDWGLVGQLADLARRQVEAVVVGIANTGPFRQY
                     EYSPFRDPVHGGGDGDRYLEFIIGAVLPLVRRSFRVLDQPGATSIAGSSMGGLVSLYA
                     LLKWPQHFGAAAAMSPSAWFAGEALRRVVEASPPPAGRLWLDIGTGEGDRTLQSVRRL
                     RDALIAQGLPVGERLHYVEDPGATHQEQDWGRRFADVMPFLLG"
     gene            complement(16440..19040)
                     /locus_tag="VGA78_07160"
     CDS             complement(16440..19040)
                     /locus_tag="VGA78_07160"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9893686.1"
                     /translation="MRLSGLSRLVVGAAALAVVLGAASSTVAGAQATGGVAGTVNRSD
                     DGSPLGGVVVAVKGTAIRTTTNTSGKYTLERIPAGPTTLEFRWVGYSPRELQVTIAGG
                     SMATLDARLEPLPVTLSEIMVSGASRAPERVTEAPSAISSVDPRALITASAFGQAPLA
                     LRNVPGVDLTQSGLTDFNVNARGFNSTLNRRVLVLQDGRDLAIAFLGSQEWNALSQPT
                     EDFNKMEFVSGPGSALYGANAYSGVLDITTPTARELLGTKVTVAGGILGTKGGWEGGS
                     PGSYRADVRHAGTFSDGKFGYRLNFGGSSSDSWSRSRTLRDSTALRREYAEATDSLPP
                     KPAPERLALRGQTVDAGTGEALGDRDPVKTLYGGARFDYYLANGNVATVEGGLANVQN
                     EVFVTGIGRVQVYDATRPWARVEYAATGYNIMAYWNGRRTNEPQFSLASTAPLRETSD
                     IFHVEGQGNTSFSEERGRLVYGGSIRNIKLDTDTTLMIGLDDDRSDYMYAGYAQFSWE
                     LSERARLVLAGRFDLGSLIDPQFSPKAALVLNPSPNHSIRFTVNQAFQTPNYSEFYLR
                     ALAGLANLSALEAGLRASALGPALAGVPDGQLFSCRTVGATCTASSSVVPVNARGNSK
                     LDVERNTGFEVGWRGDVSRRIFASVDAYYNRLSNFVTDLLPGVNPAFGRWTAPTAVPT
                     PVRPTLEAAVRNALLANPASRLAGLGLTRQENGNTAVVLSYANAGSATQKGIDAAVGF
                     QATEEFRLDVTGSWFDYEVDEGEVATGDLLLANTPEWRANLAATYGRSGLDLGVNYRY
                     SSGFPWAAGVFTGFIEPGHTFDANAGYRINPQFRVFLTGTNLVNRQWFSIYGGSVNGR
                     RVMGGVTANF"
     gene            complement(19151..20374)
                     /locus_tag="VGA78_07165"
     CDS             complement(19151..20374)
                     /locus_tag="VGA78_07165"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEX9893687.1"
                     /translation="MSRYGLLALPVLAAGLAFTAPALRDSAPEAGDEIEWRGPPGSVT
                     PNLAVGAGGRLILTWLEPVTPAGTYAFRFAVRERGRWSPPGTIRQGTGFFVNWADFGS
                     LAETGDGRWVAHWLEKTAAAPYAYHVMLSLSRDRGKTWSDPIRAHDDSSATEHGFVAM
                     SPGPAGLDLVWLDGRGMNGDDRGAMAVRTRTLGSGNRLLPEIELDARSCECCQTALAR
                     TPDGLVAAFRDRSDGEVRDIAVARQVGGQWRTPRVVASDEWEHRACPVNGPALAADGR
                     QVDLVWYTGVRSEPRVWLVRSGDAGVSFGRRIRIDEGQTLGRLDAEPLGDGSLLVAWL
                     ETRTDQEADWRIRLVNREGRAGPSRVVATVTRARLAGFPRLARVADHVFLAHTATGPA
                     GGVRVTRLVGIPEPR"
     gene            20644..21093
                     /locus_tag="VGA78_07170"
     CDS             20644..21093
                     /locus_tag="VGA78_07170"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9893688.1"
                     /translation="MRECVWLVGAILLGSCGGKEAAPAAAQPPEAAAGLSPFELEHGI
                     GPITAPVQLGAVDESMAAAGQVVFEQKCSACHKMEEKYVGPALGEVTERRSAAFILNI
                     ILNPQEMIERHPVVKQLVAEHLTFMPNQGVSQDEARQVLEYLRTQDR"
     gene            21107..23062
                     /gene="nosZ"
                     /locus_tag="VGA78_07175"
     CDS             21107..23062
                     /gene="nosZ"
                     /locus_tag="VGA78_07175"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-dependent nitrous-oxide reductase"
                     /protein_id="HEX9893689.1"
                     /translation="MHMLSLSVLGVAGLLATSILAGCAPSAGPAGSAAADAAGRVYVA
                     PGQKDEFYAFMSGGFSGNVAVYGLPSGRLFAQIPVFSQYPEKGYGYTEQTKAMLQTSY
                     GFLPWDDTHHPELSMTNGVPDGRWLFINGNNTPRIARIDLTTFETVEILELPNSAGNH
                     ASPFVTENSEYIVGATRFSVPTPQVDVPISTYKEHFAGLLTFVKLDSAGAMSLAFQIR
                     VPGYDYDLAHSGKGPSHGWTFFTSYNSEQANTLLERGASQNDKDFIAAVNWKRAEDCV
                     AQGKAKQEPARYAHNWLDHASRVARSELRTGSTVLQPQDCPGLVYYLPTPKSPHGADV
                     DPSGEYIVGGGKLATVIPVHSFSKMQKAIADQAFDGEVDGIPILKYDAIIAGEVQNPG
                     LGPLHTEFDGKGFAYTSVFLSSEIVKWSLKDFTVVDRIPTYYAIGHLMIPGGDSKQPW
                     GKYVVALNKITKDRYLPTGPELTQSAQLYAIDGDKMTLLLDFPTVGEPHYAQALPASL
                     IMDKSVRTYALAENHDPYVTRSEKDTKVVRQDQKVHVYMTSIRSHFMPDNIEGIQVGD
                     SVFFHVTNLEQDWDVPHGFALLGMRNAELLIMPGTTRTLVWVPQSVGVYPFYCTDFCS
                     ALHQEMQGYVRVSARGSSVALTWNKAD"
     gene            23111..>23589
                     /locus_tag="VGA78_07180"
     CDS             23111..>23589
                     /locus_tag="VGA78_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893690.1"
                     /translation="MAQRTRILLAFAALLLGLPFLRPLWHIGLIAPQYPEGIGLYIWA
                     SQITGEKPHDLQSINGLNHYIGMKPIVPESIPELRFMPLILGGLLVIGLGAVVAGRRP
                     LLYAWTAALLLLALAGLGDFWKWGYDYGHNLDPTAAIKVPGMAYQPPLIGTRQLLNF"
BASE COUNT         4078 a         7701 c         7988 g         3822 t
ORIGIN      
        1 cgtcgtactc caccgcgtag cggcgcgaga gcgcctcccg gtcgagggtg tagcgctcga
       61 cggtgtcgcg gagcgcctgg gcggcgaggg gggagcaggg agcagggagc aggaggagcg
      121 cagccagcgc gaagcgatgc atgaaaccga tcaattccgg gtcagaaggg ggaatcgggg
      181 aacgtgatgg accagtcatc cccccgttcc gcggcatcga ggtggagcag gacggttccc
      241 acgccggccg cgccctgcat gaatccggtc tgggccacga ggttctcggg ctggacccga
      301 tgttccgcct ggacccattt gagcccgtcg cggtcgggtg tagctcgctg catcaggtcg
      361 gcggtcacct gcctggcgaa ctccagcgcg ccgggatcgc ggtgggtccg ggctcgatcg
      421 agggcgaact gcaccacgcc ggcattgccg cagcactggc tgatgttatt ccagaacccg
      481 tcgctcctcc ggggcacccc cagggcggga ataccccggg cgagccgggc gacccagggg
      541 cggaagccgg ggtcgaccag cgcgagctgg tggaacaacc gggcggtgcc cgcgggcccg
      601 tgacaccagc tcaggtagaa cagctgttcc ccgtcgccat cgtgatggcg aatcaccacg
      661 cctgcgccct tcggcgccgc gatcgcctgg agataccggg ccccggcctt ggcgccgtcg
      721 agaaacatgg cttcaccggt gagggcatgc agtctcgcca ggaaataggc cactcccgcg
      781 gtaccgtggg agaagttagg catgttgcgg gggaaggtcg ggttcatcat ccaggtcagg
      841 ccgccctcgg ccggcgtgcc gagctcgagg agcctgcgac cggccaggac ggccagctcc
      901 cgagcccgcg gtccgccgag cgagggctcc agcatcagca gggtgagacc gatcccggcg
      961 cttccggcga tgatgtcggt cgtatcgttc cattgtacgc cgtcgccctc ggctgtcgcc
     1021 tgatccagca gcaaggcggt gcaacgcagc gaggcgtggg tgaattcgga gcggccgccg
     1081 atcgtggcgg tccgctcgag cacgaacgcg gtccccgcca ggccggtata caaccccgcc
     1141 gattgaggca accggctcgc cagctgccga gcgcccagct cggcttcgtg caggaaatga
     1201 ttctggccgg tggtcttgaa gagctccagg tagaagagca ccacaccagg catgccgttg
     1261 taaaggtcgg gtgaaaccga gtcgggccgg agcggatcgg ccggccaggc gatgccggag
     1321 cccgtggtct ggcgcgatcg ccggatccac ttctcggctt tgagcgcggc atcgagccag
     1381 ggacggtcgg tcaggccgag cttgcgaacg atctccgcca gcggcggagc agccagcgcg
     1441 gcgatcagga aatgacgtcg ggggagcata cgcgaaagta tgctatactc ctcccatcat
     1501 gcgcgccatc gtcgttcatc gtttcggtgg gcccgaggtg ctctcgctcg aagaggcgcc
     1561 cgatcctgca ctccttccgg gccaggtgct gatccggaac cacgccgccg gcgtcaaccc
     1621 ggtcgacgcc tatacccgcg ccgggagcta cgcccggctg ccgcggctgc cgtacatccc
     1681 gggatgggat ggcgccggtg aagtcgaagc ggtgggtgaa ggagttgcgg gtttcaaacc
     1741 gggggaccgg gtctacttct cggggacagc ttcgggccgc agccagggcg cgtacgcgag
     1801 ccgagtctgc tcgacccggg accaggtgca tcggttggcc ggccggctca gctatgccca
     1861 aggcgccgcg atcggcgtgc cgtacaccac ggcacaccgg gcgttatttc atcggggccg
     1921 gactcgcccg ggggagaccg tgttggttca cggcgcgagc ggcgccgtcg gtgtcgccac
     1981 cgtccagctc gctcgagcgc acggttgcac cgtgctcggc accgccggga gcgatgccgg
     2041 actcgagctg gtgcgagccc agggcgcaag ccacgcgctc cggcatggcg gcagcgatac
     2101 taccgctcag gtcctgtccc tcaccggtgg ccgcggcgtc gatgtcatcg tcgagatgct
     2161 ggccaacgtg aatctcgacc gcgacctggg gatgctggcc gtgggcggcc gagttctgat
     2221 cgtcggcaat cgggggcgaa tcgagatcga tccgcgccag accatggcga aggaatccgc
     2281 catcctgggc gtgatgctct ggcacgcggg cgacgaggag ctggcgggag tgcaccgaca
     2341 gatcgccacc ggcttcgaag acggatcgct gacgccggtg gtgggtctcg tcctcccgct
     2401 ggcccaggcc gggcgggcgc aggagatcgt cttcgaaggt ggggccaaag ggaaagtggt
     2461 cctggatgtg accggtgagg ccctgctccc tactcggtag aattggtaga ctgcttcttc
     2521 cgcttccgca gtcccgcaat gcccaacccg accagaccgg tggcgagcag cgccatggag
     2581 cccggctcag ggacggtggt ctcaggcagc tcgaagttgg accagaccgc aaactccccg
     2641 gtctcttcgc cgccgttgaa cgtgagctgc agccaatcga cgtaaccctg gtactggtcg
     2701 ggccagttac tcccgacgcc gagggcgacc ccatagatgg aggcatcgcc caggttgaag
     2761 ccggactggg cgcaggcccc agtggcgttg ggatcgacga aggaaccgcc ggcccagccg
     2821 gtgggtgttc ccagcagcag gcccccatcc cagaccgagg gcgggttctg tccgtcgggc
     2881 acgaagggtc cggtttgcgc ctggcactgg ctgttcaccc agtactgggt tccacccatc
     2941 gcgtgccaga agtactgatc catcaggtct tcagctaccc actcgtcgtt ggtcgtaggt
     3001 gagccatcgg tgtagtactt ctcccagacc agctcgctca tcaccaggct gccgttgatc
     3061 tcctggccca gcagcagccg gagcaccggc gtctgcgcca gccagggcgc gtccggccag
     3121 accgggatgt aaggcagatt gggatcctgg ggcgtcagcc cagtgcggta ccactcgaac
     3181 gacaacgccg acaagtcacc caactggccc cagggattgt cgcccgacag gtggacgtag
     3241 aaaccccaat cgctcaatcc cccggtggtg gacagcgcca gcgagccgtt gccgtgacgg
     3301 ggattggcac cggtaatctc ggcgccgccg cttgcgatgg tccaaggcga ccaggaggga
     3361 tcgccgggcc aggggaagac cttggtctgg gccggcaacg cgctggtcac gaacgtcagc
     3421 ccggcggcca ggcccagcag tcttgttgag ttctttgaca tgagacacct ccctgtcgac
     3481 agattgagca accactgtgc ccctcctgcc tttcccaacc tcccatcact caactcagtt
     3541 ctactccccg cgctgggaga acgcaaatca ttgtggtagc attgattgtg aaaaaaggtg
     3601 ctaatgttgg agcggttgag gctcgatatt gggggtcagc gggctcatgg catcgctcat
     3661 cagaccggaa ttcagccgaa ttcggccagg attatgttgt gtggtagcca cggaagtagg
     3721 atgaaagcag cagcgtcgtg tcgtcaatac aacaggttag tcggccgttt gaccaccctc
     3781 cgaagtgacg atctggcccg agacggtgac cccatcggcc aggaaaacct ggcgacccga
     3841 cacggtactg ggagcgtttg gggagccgat cgaggttccc cgtcctatct cgagtcgctc
     3901 ttccgagatc accgggccac ggatccaaca gtcctgacca atcgtgattt ctccccggct
     3961 caccagtgat ccctccacca ccgtcccgct ctcgagggtg agggttcggt gcgatttgac
     4021 gcttccagtg acccgggcgc ccggtccaag ggtgagctgg ccggccacca ccaggttgtc
     4081 atcgatcaga gttccggccg gcaccgtcaa atcagcgtca accctgagat ggtcccccag
     4141 ccgccgggag ttgggaggcg gcaggaatga agcgggttcg gtgtggcggg gcggcatggg
     4201 ccggggagtg gcaataccga ccgtaatcac cggcgctccc acccgctcaa agtgcacctc
     4261 gcgaccgaac tggatcgatt cttccgccga cgcccggccg tagaggtgcg acgccgggcc
     4321 cacgaccagc gtgccgacgc tgtgcagcca gcgaagaatc accgaccgct cgcccagctc
     4381 cacgttcttc tcgcccagaa tcgcccgata ggtcgcccgg ggactgccaa acacatcctc
     4441 ccgggcccag acctcgtact tgaactgatc accgttgtcg agcacggtcg tctggtccag
     4501 gaccacgagg cgggtggcgg actcttccgg caatccgctc cgcgagagct cattcgagag
     4561 ccgggcggtg cggatgaacg gggtcccatc gggcagggta ccggtctggt gatcctcgac
     4621 gccgttccgg ggtggatact gctccagctg gccctggagg tactcgcgga aatgacgggc
     4681 aaaccggctg atgtcggcgt tgtcgcggcc caccatggtg agcggctcca cgtcggtcgg
     4741 ccggaagaac tcccacagcg ccggcagcaa cggcagcagc gcccacgcca gcgtgatgag
     4801 cagcaacagg atgaagggga gcgggttcac accttcccca ccgtgttggc gttacggtac
     4861 cgctcggtct tttcccagcg ggggccggcc cggggcaccg ccagccagga ccggcgcgag
     4921 agcgtggccc gggaaatcgc cagcagattc accaggaagc cgagtgacag gaacggcagc
     4981 agccggatcc ggttgcgcga gccgtccagc cggcacgcgg tggccacctc gaagaacgcg
     5041 gcgaaattgc ctaacgtgct gtagctggcg acggcgaaca ggaccaccag gctctgcgag
     5101 aattggtagc ccatgaagaa gagcgacgtc gcgaagaccc agcccagcag cagaatcggc
     5161 gccaccgcga acacgccgag cagcaggacg ccgtcgatga cctgccagaa cctcaggtgt
     5221 ttggggaact tgagcagctg gaaggcgtag cgtctgaggc actgattgtg gccccgggtc
     5281 cagcgctgga tctgccggat ccgggtaggc cagttctccg gcacctcctc gtagcactcc
     5341 gaccggttct ggtagaccac ttcccagccc cgcaggatca accggtaggt gatgtcggtg
     5401 tcctcggcca gcgagtcctc gttccagttg ccagcgtcga gcagcgccga gcggcggacc
     5461 ccgccgaccg ttccgccgta ctgcggaatg aggtgcaggt tcatgcgggc ctgctgatcg
     5521 acctgatacc cgcccgatcg ctccaggtcg agcagccgcg tcagcagggt gcggttgaga
     5581 ttgtggggga ccacccggcc catcaccgcc cccaccgaag gatcgaagaa cggcgccacc
     5641 agctggcgca gtagattggg ccccggcagg taatcggcgt cgaacaccag gaagatcccg
     5701 gtatcgctcc ggtcggtcgc ttccttgagc gccgctgcct tgccgggctt gccctccttc
     5761 cggtggtacg gacgcacccg ccccggatac tccgcggcat accggtcgat gatctcggcg
     5821 gtgccgtcgg tggaccggtc gttgatgggg acaatgaaga accggtcctt ggggtagtcg
     5881 gcggccagca acgcgtccag catgccgccg atgaccttct cctcgttgtg acagggaacg
     5941 aagatggcga cctcgggcca gtcgcccatg ccgatatcca cgtaaggctg acgatggcgg
     6001 ccgaacaccc ggttgagcgt gaagatgtag tgccgcaggg tgtagatcac gaggatcgcg
     6061 accaccaccc agagtccggc ggcgaggagg ttccggatca ccgcagtgcc ctcctcgccg
     6121 gctgggtctg cgggatttcc tcgcccggcc agctcatggc ccatccgtag aaggccacga
     6181 agaccagcac ctcgaccagc agcccgaaca cgaagaacat ggtcggctgc accagggccg
     6241 acaggtagtg cgacagccag gcgtggatca gcacctgcag cggcaacagc accgccagat
     6301 gtcccagcag caacagcgtc aggagcatct gccgcgccag gctatgatcg aaaatgtaga
     6361 atgagaatcc cagcacgatc gggatcaggg tgaggactgc gatccccgcc gtgagcatgc
     6421 cggccgtgta tccgggcagc ggatagagga agggcgggct gctcagcgcg aagaatccga
     6481 gcgacacggt ctgcaccagc gcgacgaacc ggatgaagta acgggccggg agatacttga
     6541 ccggcagcag aaacgagagc aacagcccga tggcggtggc cgcacccacc acgacccagt
     6601 ggaatcggag gggccagggc gccgccagcc tgaaataggg aatggggatg gtgagcagct
     6661 cccccaccct gatctcctga actccgactc ccgccggtag accgatccac cagatcagct
     6721 cttcgtagag catggtgtag aaccggccca gccaggggag cgccactatc acaccggcgg
     6781 tgaaaaccag cgagaggagc acggcccggc cgacccgggt ggtgctccac tccagtccga
     6841 ccatggcgcg gtgcttccgg atgacgccgc ccttggcccc ccggagccgc aggtcctcga
     6901 tccccccgcc gagcgggagc aggctcttac cagtgccgga aaacgccaag cgtcaccccc
     6961 gtccgggtgt agaacgggtt gtcgtaccac tcgccaccgg cgaagacgcc cccgtgcccg
     7021 cccagccatt cgcgccagct gatcgaggct tcataactgc tgaaactgcg ctgggtctcc
     7081 acgatgccgg tcagctgata tccctcggtg ccggccccgc cccgcagaac caccaggcga
     7141 ttccgctcgc gtcccagcgt cagcgcgcca taggcccgct cactccgcac cgcttcgggc
     7201 cagctccagt tgatgcgacc gccgatctcc gcggtgactc cggggaaata gccggccagg
     7261 gtcccactca ccgcaaagtc ctcgtagccg agcttcgcgt tcacgtaggt ggcgcccagg
     7321 atggtgacca gatttttccg ctccagccag gcgtgtccga tggccaggtc ggcgcggaga
     7381 tcgggaagga cgaaatcccc ggtcccgccg ccgacactgg ccagggtgaa ccagtttggc
     7441 ccgaagaagt gccggttgcc gacagcggcg taaacgccgc ggtcgtcgaa ggcctcctgg
     7501 gccagcagat cgccgtacca gatgttgcgg cggccggctg gcaccaccgc ccggagggcc
     7561 acgcccttcc aatcgccgaa gtcattggtg acgcgatggt agtaggcctc ggcctggagc
     7621 catccagcgg gcccttgggc cgttaccggc cgcacccctc ccgcggctag agccaacacc
     7681 accaggatac cggggcggcg ggtcatgcct gcaatgccat ccggttggcc aggggcagtc
     7741 cgaaccgctc cgcgatgata ctcacgattc gctcggccgc gtgaccgtca ccgaaggggt
     7801 tgccgcccga caccatccga tgataggccg cttcatcgga gagcagctgc gaggccgccg
     7861 cgaatacgac gtcgggatcg gtcccgacca gccggccgaa ccccgaatcc acgacctccg
     7921 gccgctcggt cacggtgcgc aggatcagaa tcggcttgcg gaacgacggg gcctcctcct
     7981 gaatgccgcc cgaatcgctc agcacgaagt gggaccgccg catgacctcg agcagatcgg
     8041 ggtaggagag cggttccagc agtgaaatgc ccgggacatg gcgcagttcg gcgaatacga
     8101 cctcacgcac ccggggattg agatgcaccg gaaagacgat ctgggcatcg gcatggcgag
     8161 ccaggatccg ccggaagccc ccgcacaagg cgtgcaggta ctcgcccagg ttctcgcgcc
     8221 ggtgtaccgt caccagcaga acccggcgct tccagtcgat ccggttcaag gccggatcgt
     8281 cgaattgggt ccggggacgc accccggcga gcgcgtccac caccgtgttg ccggtgacgt
     8341 agatgtcgcc cggtggaatc ccttcgcgcc agagattgtc ccgggcccgg ctggtagggg
     8401 cgaaatgaag gtcggtcgcc acactggcga tccggcgatt ggcttcctcg gggaatgggc
     8461 gatgcatgtc gccggaccgg aggccggcct cgacgtggcc gatcgggatg ctctggtaga
     8521 acgccgccag cgcggccgac accacggtgc tggtatcgcc ctggaccagg agcaggtcgg
     8581 gcttgacgtc ggcgaagcac tgggtcaacg ccagcagtgc atgggccgtg aactcggcga
     8641 gggtacggtt ggtgtgggtg aggcccaagt cgaggtcggc gtgcaattcc atggcggtca
     8701 tcgcctgcgc cagcatttcc cggtgctgcg aggtggcgat caccatcggt tggaagacat
     8761 cggggcggtg ttccaaggct cgaaccaccg gcgccatctt gatggcttcg ggccgggtgc
     8821 cgagtacgat cgcaatccgg aatcgcgctc tacccgaggc gcggcccaac aggtggtccg
     8881 tgatcgtcat gtcccccggg aggggcaagg ttcacgccac caggagcccc ggcggcggct
     8941 tgtggagcag gattcaactc ctaaaataag tcgttgacgt ataagtacat ataggacgag
     9001 gtcaagccgg agggcggacc ccggtcggtc tcagggccct tttcccgagg ttttccatgc
     9061 gtctggtccc attggtcccg ttgttcacca tactcgcggc gttgccgctc tccggccaag
     9121 accgggtccg agcccgggat ctgggcgtgg cgcccgggat cttcggaccc ggggccaaaa
     9181 acgcgattac ggacgtcgcc ggggtccggg ttgggcagtc gtcgatgatc gccggtgatt
     9241 cgatacgtac cggagtaact gccatcctgc cccacggcag caacctgttt cgcgagcgag
     9301 tgccggcggc catgtacgtg ggcaacggct tcggaaagtt gttgggcgtg acccaggtcc
     9361 gggagctggg tgagctggaa acgcccatcg tgctcacctg caccttatgc gtctggcggg
     9421 cggccgacgc gctggtggaa tggatgctgg agcagcccgg catgcagaac gtgggatcga
     9481 tcaacccggt ggtcggggaa accaacgacg gcgggttgaa tgcgatccgc tcccgtccgg
     9541 tcgggcgtga ccaggtgcgc gaggcgctca cccgcgccag tgatggtccg gtggcggaag
     9601 gaagcgtggg ggcgggcacc ggcacccagg ccttcggctg gaaaggcgga atcgggactt
     9661 cgtcgcgggt attgccggcg cgactgggcg gctggacggt gggggtgctg gtccagagca
     9721 acttcggcgg ggtgctgcag gtgctgggcg ccccggtcgg caaggagctg ggacggtatt
     9781 cctaccgggc cagtgtcggg tcggaaaggt cggaaaggtc ggaagggtcg gaagattctg
     9841 gcgacgggtc gatcatgatg gtggtggcga ccgatgcgcc gctgtcggat cgcaatctcg
     9901 agcgggtagc ggcgcgggcg ataatgggat tggcacggac cgggtccttc gcctcgaacg
     9961 gatcgggtga ctatgtcatt gctttctcca ctgccgacgc ggtgcgccgg aagcagggag
    10021 cagggagcag ggagcaggga gcagggctcc cactcgtggc ggatctgcct aacgacgaca
    10081 tgtcggcgct gttcgcggcc gcggtcgaag cgaccgaaga ggcgatctac aactcgctgt
    10141 tcatggcaac gacggtggag agccggatcg gtcgggcgga ggcgattccg ctcgatcggg
    10201 tccgcgaaat cctcaagcga tacggcgtcg gaccgaaata gggagcaggg agcaggaagc
    10261 aggagccctg gtcccttgtc cccgctacct gcttcctgtt tttacgatcg cttcaccggc
    10321 aacccgttcg atccagcggg cgattgctgg taaaggcgtg agtccggtgg ggacgtagcg
    10381 gatcgggaga ccgtccaggt ccttcggtat tcttacaccg gtcatctcgc ctcgggccac
    10441 cagcaccgtc atcaccgtca ccgaatcccc ggcgcggtcg gcgagggcgg ttacgctgtc
    10501 gcgcagccgc cggatggcgt cggcccgaac tgacggggcg gcgtcgtcgc gcagcagggc
    10561 ggaccggctt tcgtggctgt gtcccagctg gcgcacccgg gccagggcgg tgtggaaggc
    10621 cgcggtccag cgttcggcgt cggtttcatc attggggcca tggcccagca acacgagcgg
    10681 ggccgtgcgg agtcgaagat cgagcgccga ccaccggttc gcgacggcct cgagcaactc
    10741 cggggcggcg tcgagcgccg gcgtcacctg catcggaacc gccggcctgg cacgacttgc
    10801 gtggtcgtgg cccgcgagct cggcggggag ccgatcgagc tcgcccgcgt agtaacggac
    10861 ctggcggtaa tggctgccga atgacgagac catcaggggt actacgacca ccgaccgcac
    10921 gcccgccgag gtcagccggg ccaccgccga gtcccaaccg gccgactggg cctcgggccc
    10981 catcaggaag gcagtggcgg tgggaccgag ccgccaagta acctgggcga cagtcccccg
    11041 tacctgggcg ttccagtccg ccgtagcgcc gtgggcaacc accaacaatc cgacttggcg
    11101 ggcgtcggcc tggctgagag gcgccccgag tgcgagcagt gcgagccaca cccgggcggc
    11161 tctgacattt atgtacatga aaatgattct caaatcgttt tggaatctga gaatacacac
    11221 cgtgcctcag agtggtcaac tgggagccag gactcacgac ggacgtagga cttaggtcta
    11281 agtcctttag ggctaagttc tggagttact gcagacttcg atgaaaggtt tgaggatgcg
    11341 gaaggagtgg tcggtcgcca tcgattcggg gtgccattgg acggcgacca gataagggtg
    11401 gtgggggctt tcgatcccct cgatgagacc gtcgggtgcg atcgcggcga cccggaggcc
    11461 ttcacccagc cgatcgatgc cctggtgatg catgctgttg accgcgatcc gccgagcccc
    11521 gagcgcctgc tcgagccgag cgtcttgggt cagggttacg tcgtgagcca ggtgatcgcg
    11581 ctgccatccc gctgtcggga agtagtcgtg cttgatggca tcgtcgcatt cggcggccac
    11641 gtcctgaaac aggctccccc ccatcgccac gttgatgacc tgcaggccgc ggcagatccc
    11701 cagaatcggc ttgccttcgg ccactgccca gcgggtcagc tgcagctcca cctggtcgcg
    11761 agccgggtca atcgcaccac agagcggggt ccgggtttcg ccgtaggtcg ccgggttcat
    11821 gtcgacgccg ccggccagga gcacgccgtc cagccgatcg tagatctcgc gcagggtcgc
    11881 gaggtcttcg atcagaggga tcatccacgg caccccgccc acggccgcgg cgaccaggta
    11941 gtagcgctgg ttcatgaccc acgacagggg cagcccttcg ggaatgccat ccatcgcctg
    12001 cagcgtctgg gtcgggatgc cgatcacggg gcgccgtagc ttcacgtcag gtcactccct
    12061 ccgcggtctc gcggatcagc tggtccacca cgtcctcgag gttgccggtc cggcgccagg
    12121 tggcgacctg ccggtcggcg ctggtgccct cgtccatgat acgcaaggca tattccgctt
    12181 cggcccggct gcccagctcg tccaggacgt cgcccagaaa ccaatccagc agttcgtgaa
    12241 ttagttcccg ggccggcgct tcccggttct tgccgaaatc gatcaagttg ccgtccaggc
    12301 cgtagcgcac ggcccgccac ttgttctcct cgatcagctc ctgggggtag atccggaacg
    12361 tcaggttgtc gcgccggagc ttccacagct tggcgatgat gccctggaag atggccgcga
    12421 tgcacacggc ctcgtccacc cgggtgttga cgtcgcagat ccggaactcg agcgtgggat
    12481 agctccagtt gggccggacg tcccaccaga tcttggacgc attggggatc gagttggtgg
    12541 ccaccagggt ctccaccagc tgctcgaagt cttcccagga tccgatttcg ggcggaatgc
    12601 cggtgcgggg gaaattgcga aagatcacgc tgcggtatga cttgagcccg gtctgccgtc
    12661 ccagccagaa gggcgagctg gtcgacaggg ccagcacgtg gggcaggaag taccgggcca
    12721 cgttcatggc atcgatcagg aattcccggt cctcgatgcc gatgtggacg tgggttccga
    12781 agatgaggag gctctgggcc aggtcctgca ggtcttcccg cacgcccatg tagcgttcca
    12841 gcggcgtgat ctcctgggtc tgccaggcgg agaagggatg actcccggcg gccacgatgg
    12901 cgagcccgtt ccgggccgcc agctccatca ccagcttgcg gagccgcacc agctcggccc
    12961 gggcttcggc cgggttgcgg cacaccttgg tgcccacctc caccatcgac tgatgcagct
    13021 ccggcttgac ctcacccagc accaccacgt cttccttgag gatctcggtg atgtagctgc
    13081 gcagctcgcg ggtcttggga tcgatgatct ggtactcttc ttcgattccg atggtgagcg
    13141 acggcggctg gggcgtcatc gaggcctcgg ctccaccacg aaggtcggga cggtcgatcc
    13201 gccgcccgcg gtgacgttga ccagtgaggc ggtcgagatc cgggtgaggc atccgtccac
    13261 ctgggctccg ttgaacacga agggcgcggt atcgacgatg cgatcggcca gctcgatggc
    13321 gccgccctgg cccagcgcgg gaaatggctc caccggcagc tcgatccgct cctgcacgat
    13381 gcagggctgg gagagcgcat cgcgcaacgc cgcttcccag gtggcggcat cactctccca
    13441 cccgagaacg acgcctttcc cgccgtaatc gtcgttcggc ttgagcacca gtcgctcccg
    13501 ctccgacatg atgtagggga ccagatccac cggttgccct cggacggtgg tacggcgctc
    13561 ctccaccacc cgggtccagg gcacatgccg gctgatggcg gcgcgctcct ccggcccgaa
    13621 gagcgaggca ttcctctcat cggacagcac cgccaggctg gccttcttgt gcagcagttt
    13681 gcagcggaag ccgttggcca ggcaaaccgc gccatcccgg acggcgcgga tcaccgggtg
    13741 gttcaggccg ccccgctgca ccagctcgtg gatcagcacc cgtttgtaga tcagatccac
    13801 cgggcggccc cgggccgtga gccgccctcc gccgtactcg cattcctccg ggtcgacgat
    13861 catcgacgcc aggccgtggg cccgaaagaa ctcgtcgtag agcacgaact cgctgtaggt
    13921 gggcacctcg cgccaatcca cgatggcaat ggacggcgcc tcgcgccggc ccgaccaggc
    13981 gaaccaggca tcgagcagcg cgtggaggac gtggtgccgg gccgggaggc cccacatcag
    14041 gtgggtccgg agaaactcgc gggtcgacgg cagcgagaga aagatctccg acagggcatc
    14101 gccgtaggcg cttcccgccg gggtctcacc gttgtactcc gtcacccgga aatcgctccc
    14161 ggcctggttg aagaacgcgt cgatccggct gagtgagctg ggcgcggtgc gtccgggatc
    14221 ggatcccacc agctcggttt cccaggcttc cagccggaat tgggcgaaca cagcgggatc
    14281 cgtcatcgcg gcggtccagg cggcgtcgaa ggcacggagc aggaggcggc agcgttcccg
    14341 caccagtcga tactggctgg gcgtcagaaa gcgggggcgc aacaccgtgc agagggcccg
    14401 gtccccgaag aagaggccgc gcccctggag ctcgctctcg agcatcaggg cggattcccg
    14461 cccgaccggt ccgtcgagcc catcgtgcca cgccgcgatc gcggcgctgg gcggcgaggc
    14521 cacgccgatg gtcatacccg tccctgcaat agctggttcc agctctgcgg cccgggcgga
    14581 gtgcgcggct cccgggccag ccggatcgtc aggtcggcca tcttctggat cacccactcg
    14641 aagtagccgg gggtcaacga atggatgtcg aaatcgggcg ccggattcat gaaatcgatg
    14701 gcgtagggca ccccgccccg aaccgcccac tcgatcgaat tcatgtcgta gcccagcgcc
    14761 cggaccaggg cacgcgattc ggtgacgatc tgatccctga gccggggcgc gaggtagtcg
    14821 ggctcgacgt ggtagcggcg ttcgccgggg tcgtagtgga tcggcaggat ctcgtcccgg
    14881 ccgatgcaga tacagcggac gaactgctcg aactggatga actcctggac gatcatggtg
    14941 agctggcccg aggcgtcgta atgctggagc agctcctcca tggtgcggca gatgtagaca
    15001 tcgcgccagc cgccgccgta ggcatccttg agcaccaggg ggagacccac gtaatcgacc
    15061 gccgccttcc agtcgagcgg gaacaccagg ttccggaggc tctcatcgtg tttgatgccg
    15121 gggatgtact ccttgttagg cagcagcgcg gtcctcgggc tggcgatgcc cagcgaggtg
    15181 gccagggtgg cgccgaagaa cttgtcgtcg gccgaccaca tgaaggggtt gttgatgacc
    15241 gaggcgccgc gcagcgcggc gtgcttgagc caggtgcggt agaacgggac ctcatgggaa
    15301 atccggtcga tgaccacggc atactcggcc ggatcgtcca tccggggggc gcccagcttc
    15361 acgtactcgg cgctgacccc ggcgttccgg cgatggatct cttcgacgaa cgccggaggc
    15421 cagctccatt cccgccccac gagcagccca atcctggtgg tcatgcgcgg actccttgtg
    15481 gacgtcggtc ggtgggccgg ccggtcggtc ggtcaaccta acaggaacgg cataacgtcc
    15541 gcgaatcggc ggccccaatc ctgttcctgg tgggttgctc cggggtcctc gacgtagtgc
    15601 aaccgctctc caaccggcaa cccttgcgcg atcagcgcgt cccgcagccg gcgcacgctc
    15661 tggagcgtgc gatcgccttc gccggtcccg atgtcgagcc agagccggcc ggccggcggg
    15721 ggcgacgctt ccaccacccg gcggagggct tcgccggcga accaggccga gggactcatc
    15781 gcggccgcgg cgccgaagtg ctggggccac ttgagcaggg cgtagaggct caccagacca
    15841 cccatggagg agcccgcgat ggacgtcgcc ccaggctggt cgagcactcg aaagctccgc
    15901 cgcaccaggg gcagcaccgc cccgatgatg aactcgaggt aacggtctcc atcgccgcct
    15961 ccgtgcaccg ggtcgcgaaa ggggctgtac tcgtactgcc ggaacgggcc cgtgttggcg
    16021 atgcccacca ccaccgcctc gacctgccgg cgggccagat ccgccagctg gccaaccaat
    16081 ccccagtcgc cggcgaaact ggcgacggga tcgaacaggt tctggccatc gtgcatgacc
    16141 accacgggat aggaccggcc gctctcctgg tacgagggcg gcagcgccac gatgatatcc
    16201 cggtagttct gcagctcccc gcttcgcaat ttgcgccagc gtttgagggt cggggcgccc
    16261 tcggcggcga ttggaagcgg gtagtctgtc cagctcatgg ggaaacgtac attcgccgcg
    16321 ttgcaacccg gtcggaaggg tcgggaaagt cggaaaggtc ggaagtctcg tcacgcaact
    16381 tccgaccttt ccgactggtg tttccgactt ttccaacttg cgatccaacc caccaaaggt
    16441 cagaagtttg cggtcacgcc ccccatcacc cgccgtccat tcaccgatcc gccgtagatg
    16501 ctgaaccact gccggttgac caggttggtc ccggtgagga acacccggaa ctgggggttg
    16561 atccggtagc cggcgttggc gtcgaaggtg tggcccggct cgatgaagcc ggtgaacacg
    16621 ccggcggccc aggggaaacc gctggagtag cggtagttca cacccaggtc gaggccgctc
    16681 ctgccatagg tggccgccag attggcccgc cactcgggag tattggcgag caggaggtcg
    16741 ccggtggcga cttcgccctc gtcgacctcg tagtcgaacc acgatccggt gacatccagc
    16801 cggaattcct cggtggcctg gaaccccacg gcggcatcga ttcccttctg ggtcgcgctg
    16861 ccggcgttgg cgtaggagag cactacggcg gtattgccgt tctcctgccg ggtgagaccc
    16921 aggcccgcga gccgggaggc cgggttggcg agcaaggcgt tgcgcacggc cgcttccagg
    16981 gtgggccgga ccggggtcgg caccgcggtc ggcgcggtcc agcggccgaa cgccgggttg
    17041 acgccgggca gaaggtcggt gacgaagttg gacagccggt tgtagtaggc atcgaccgac
    17101 gcgaagatcc ggcggctgac gtcaccccgc caacccacct cgaagccggt gttccgctcg
    17161 acgtccagct tgctgttgcc gcgggcgttt accggcacca cgctggagct ggcggtgcag
    17221 gtggcgccga ccgtccggca gctgaacagc tggccgtccg gcacccccgc caacgccggg
    17281 cccagggccg aggcgcggag ccccgcttcc agcgcgctca ggttggcgag tccggccaac
    17341 gctcggagat agaactcgga gtagttgggg gtctggaacg cctggttgac ggtgaaccgg
    17401 atcgagtggt tggggctggg gttgagcacc agcgcagcct tgggcgagaa ctggggatcg
    17461 atcagcgagc caaggtcgaa gcggccggcc aggaccagcc gggcccgctc gctgagctcc
    17521 cagctgaatt gggcgtaccc ggcgtacatg tagtcgctgc gatcgtcgtc cagcccgatc
    17581 atcagggtgg tgtcggtatc gagcttgatg ttccggatcg acccgccgta caccaggcgg
    17641 ccccgttcct cggagaagct ggtgttgccc tgtccctcca catggaagat gtcggacgtt
    17701 tcgcgcagcg gcgcggtcga cgcgagcgag aactgcggct cgttggtccg gcgcccgttc
    17761 cagtaggcca tgatgttgta gccggtggcg gcgtactcga cccgggccca gggccgcgtg
    17821 gcatcgtaga cctggacccg gccgatgccg gtaacgaaga cttcgttctg cacgttggcc
    17881 aggccgccct cgaccgtggc gacgttgccg ttggcgaggt aatagtcgaa ccgggcgccg
    17941 ccatagaggg tcttcaccgg atcgcggtcg cccagcgcct caccggtgcc tgcatcgacg
    18001 gtttgacccc gaagcgccag ccgttcggga gccggcttgg gcggcaggga gtcggtggcc
    18061 tcggcatatt cccgccggag cgcggtcgag tcccgcaggg tacgcgaacg gctccagctg
    18121 tcgctggagg agccgccgaa gttcagccga tacccgaact tgccgtcgct gaaggtgccg
    18181 gcgtggcgca catcggcccg ataggatccg gggctgccgc cttcccaccc tcccttggta
    18241 ccgaggatgc cgcccgcgac agtgaccttg gtacccagga gttcccgcgc ggtcggagtc
    18301 gtgatatcca gcacaccgct gtaggcgttg gcgccgtaca acgctgagcc ggggccgctg
    18361 acgaactcca tcttgttgaa gtcttcggtc ggctggctca gcgcgttcca ttcctgcgat
    18421 cccagaaacg cgatcgccag atcgcggcca tcctgcagca ccaggacccg gcggttgagg
    18481 gtcgagttga agccgcgggc gttgacgttg aagtcggtga ggccgctctg ggtgaggtcc
    18541 acccccggca cgttgcggag cgccagcggc gcctgtccaa aggcggacgc ggtgatcagg
    18601 gcccgcgggt ccaccgacga aatggcggag ggcgcctcgg tcacccgctc cggcgcgcgc
    18661 gaggcgcccg acaccatgat ctcggagagc gtcaccggca gcggttccag ccgcgcgtcg
    18721 agcgtggcca tggagccgcc ggcgatggtc acctgcagct cccggggcga atacccgacc
    18781 cagcggaact cgagcgtcgt ggggccggcg gggatccgct ccagcgtgta cttgccggag
    18841 gtgttggtgg tggtccggat ggctgtgccc ttgaccgcta ccaccacccc gcccagggga
    18901 gatccgtcgt cggatcggtt gacggtaccg gcaacaccac cggtcgcttg cgcccccgcg
    18961 accgtggaag acgccgcgcc caggaccact gccagggccg ctgcccccac aaccagcctg
    19021 ctgagaccgc tcagtcgcat agtctcgcgt ccttagagag tgtccggagg gattcgggcc
    19081 ggccgggttc tgcccggctc ggctggcgat aaagtggcgc tggaaacgag gttcgggaag
    19141 ccccgccgtc ctaacggggt tccggaatgc cgaccaacct ggtcaccctc accccgcctg
    19201 cgggaccggt ggcggtatgg gcgaggaata cgtgatcggc tacccgagcc aggcgaggga
    19261 agcctgccag gcgggcccgg gtgacggtgg ccacgacccg gcttggcccg gcgcggcctt
    19321 cccggtttac cagccggatt cgccagtcgg cttcctgatc ggtgcgcgtc tcgagccagg
    19381 ccaccagcag cgagccgtcg cccaacggtt cggcgtccag ccgtcccaag gtctgtccct
    19441 catcgatccg gatccgccga ccgaagctga ccccggcatc accggagcga accagccaga
    19501 cccggggctc gctccgcacc ccggtatacc acaccagatc gacctggcgg ccatcggcgg
    19561 ccaaggccgg tccgttgacg gggcaggcgc ggtgttccca ttcgtcggat gccacgacgc
    19621 gcggggtccg ccactggcct cccacctgac gggccacggc gatgtcccgc acttccccgt
    19681 cgctgcgatc ccgaaaggcg gcgaccaggc catcgggcgt gcgcgccagc gcggtctggc
    19741 agcactcgca gctccgagca tcgagctcga tctcgggcag cagccggttc ccgctaccca
    19801 gggtcctggt ccgcaccgcc atcgcgcccc ggtcgtcgcc gttcatgcca cgtccgtcga
    19861 gccagaccag gtcgaggccg gccgggcccg ggctcatggc gacgaagccg tgctcggtgg
    19921 ccgagctgtc gtcgtgagcc cgaatggggt cgctccaggt cttcccgcgg tcgcgcgaga
    19981 gggagagcat gacgtgatag gcatagggcg ccgcggcggt tttttcgagc cagtgcgcca
    20041 cccagcgacc atcgccggtc tcagccagcg agccgaaatc ggcccagttc acgaagaaac
    20101 cggtgccttg ccgaatggtg ccggggggcg accagcggcc ccgttcgcgc accgcaaagc
    20161 gaaaggcgta ggtgcccgcg ggggtgaccg gctcgagcca ggtgaggatg aggcggccgc
    20221 cggcgccaac ggccaggttg ggcgtcacgc taccgggcgg acccctccac tcgatctcgt
    20281 cgcctgcttc aggtgcggag tcgcgcaggg ccggcgcggt gaatgccagc ccggcggcga
    20341 gcaccggaag cgcgagcaaa ccatagcgtg acatattcga aatctatcat tgataattga
    20401 caattgacga ttgacgatgc gtcgtgcgaa tccttcggtc gcgatgcgcc ctcaggatgc
    20461 cggctaagat gggttggtgc aatcacaaag cgtcgattgt caatcgtcaa tggattcaag
    20521 cccccgctcg caggcgctcc cgccaggtct ggaatcgtga atcccgcttc acatccttct
    20581 cacgctgacg ccagagcccg gcttctaggt tgactagcgg gaatgctcat accgaggtga
    20641 agaatgcggg aatgcgtatg gctggtggga gcgatcttgc tcgggtcctg tggggggaag
    20701 gaggccgcgc cggcggcggc ccagcccccg gaggctgcgg ccggcttgag ccccttcgaa
    20761 ctggagcacg ggatcgggcc gatcacggcg ccggtgcagc tgggtgccgt ggacgagagc
    20821 atggcggcgg ccggccaggt ggtgttcgaa cagaagtgct ccgcctgtca caagatggag
    20881 gagaagtacg tggggccggc gctgggtgag gtcaccgagc ggcggtccgc ggccttcatc
    20941 ctcaacatca tcctcaaccc ccaggaaatg atcgaacgcc atccagtggt gaagcagctg
    21001 gtggcggagc acctgacgtt catgccgaac cagggggtca gccaggatga agcacggcag
    21061 gtgctggaat atctgcgcac tcaagatcga taaggacatc ccaaccatgc atatgctctc
    21121 gctgtcggtt ctcggcgtgg ccggcctcct cgccacatcc atcctggcgg gctgtgcccc
    21181 ctcggccggg ccggccggct ccgccgccgc agacgcggcc ggcagggtgt acgtcgcgcc
    21241 gggccagaag gacgagttct acgccttcat gtcgggcggg ttcagcggca acgtcgcagt
    21301 ctatggcctg ccgtcgggac gcctgttcgc ccagatcccg gtgttctcgc agtacccgga
    21361 gaagggttac ggttacaccg agcagaccaa ggcgatgctc caaaccagct acgggttcct
    21421 gccctgggac gatacgcacc accccgagtt gtcgatgacg aacggcgtgc ccgacggccg
    21481 ctggttgttc atcaacggca acaacacgcc ccggatcgct cggatcgatc tcacgacctt
    21541 cgagaccgtg gagatcctgg agctgccgaa ttccgccggg aatcacgcct cgcccttcgt
    21601 caccgagaat tccgaataca tcgtcggggc gacccggttc agtgtgccga cgccacaagt
    21661 cgacgtgccg atcagcacct ataaggagca ctttgcgggc ctgctcacat tcgtgaaact
    21721 ggattcggcc ggcgccatgt cgctggcctt ccagatccgg gtgccgggtt acgactacga
    21781 cctggcccat tcgggcaaag ggccttcgca cgggtggacg ttcttcacct catacaacag
    21841 tgagcaggcg aacacgctgt tggaacgggg ggcctcgcag aacgacaagg acttcatcgc
    21901 ggcggtgaac tggaagcggg cggaggactg cgtggcccag gggaaggcaa agcaggagcc
    21961 ggcccggtat gcccacaact ggctggatca cgcaagccgg gtggcccggt cggagttgcg
    22021 taccggctcg accgtgctgc agcctcagga ttgtcctggc ctggtgtact acctcccgac
    22081 tcccaagtcg ccccacgggg cggacgtgga tcccagcggc gagtacatcg tgggcggcgg
    22141 caagctcgcc acggtcatcc cggtccattc cttcagcaag atgcagaaag cgatcgcgga
    22201 ccaggctttc gacggcgaag tcgacggcat tccgatcctc aagtacgacg cgatcatcgc
    22261 gggcgaggtg cagaacccgg gactgggccc actgcacacc gagttcgacg ggaagggatt
    22321 cgcctatacc tcggtcttcc tctcctccga aatcgtgaag tggtcgctca aggatttcac
    22381 ggtggtggac cggatcccca cctattacgc gatcggccat ctgatgattc cgggtggcga
    22441 cagcaagcag ccctggggca agtacgtggt ggcgctcaac aagatcacca aggaccgcta
    22501 cctgcccacc ggtcccgagc tgacccagtc ggcgcagctt tacgccatcg acggcgacaa
    22561 aatgacgctg ctgctggact tcccgaccgt gggcgagccg cactacgccc aggccctgcc
    22621 ggcctcgctc atcatggaca agtcggtcag gacgtatgcg ctggccgaga accacgaccc
    22681 ctacgtcacc cggagcgaga aggacaccaa ggtggtgcgc caggaccaga aggtccacgt
    22741 gtacatgact tccatccgca gccacttcat gccggacaac atcgagggca ttcaggtggg
    22801 cgactcggtc ttctttcacg tgaccaacct ggagcaggac tgggacgtcc cgcatggctt
    22861 cgccctgctc ggcatgcgca acgccgagct gttgatcatg cccggcacga cccggacgct
    22921 ggtgtgggtg ccgcagtcgg tcggggtcta ccccttctac tgcaccgact tctgctcggc
    22981 gctgcatcag gagatgcagg ggtacgtgcg ggtttcggcc cggggctcca gcgtggcgct
    23041 gacgtggaac aaggccgact agtcactgtc cctcgtcggt caggaccagg gcccggcgac
    23101 tgagagagac atggcacaac gcacccggat cctattggcc ttcgccgcct tgctgctggg
    23161 cctgcccttc ctgcgtccgc tctggcatat cggcctgatc gcgccgcagt atcccgaagg
    23221 aatcggcctg tacatctggg ccagccagat caccggtgag aaaccgcacg atctgcagag
    23281 catcaacggg ctcaaccact acatcggcat gaagcccatc gtcccggaat cgatcccgga
    23341 gctgcgtttc atgcccctga tcctgggtgg gctgctggtg attggattgg gggcggtggt
    23401 ggccggccgc cggccgctgc tgtatgcctg gaccgccgcg ctgctgctgc tggcgctggc
    23461 aggtctgggg gacttctgga agtggggcta cgactacggc cacaacctcg atccgactgc
    23521 ggcgatcaaa gttccgggca tggcgtacca gccgcctctg atcggcacca ggcaactcct
    23581 caacttcca
//
LOCUS       DASWKS010000245         4489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1218075, whole genome shotgun sequence.
ACCESSION   DASWKS010000245 DASWKS010000000
VERSION     DASWKS010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4489
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1218075"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VGA78_07185"
     CDS             complement(<1..574)
                     /locus_tag="VGA78_07185"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEX9893691.1"
                     /translation="MRLWVVILGLAVALSWAAAPLAAQQQGPPVDSLVVEGNRRVSTE
                     QIVQTSGIILFQPINYRTNQRAIQALFATGQFDDVQIEQRGGQEKLIIAIVVKERPVL
                     QRWAVRGSDQVSESQVRSKVVLLEGRPLDRAGVGRAKAAIDSLYQKKGFYAAQVKVNE
                     VEAGPGSVRLIFDITEGSRVAIAQVVIEGNS"
     gene            complement(613..3090)
                     /locus_tag="VGA78_07190"
     CDS             complement(613..3090)
                     /locus_tag="VGA78_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEX9893692.1"
                     /translation="MNGYNFTDRVRKVLQMAREEAARLHHEYVGTEHILLGLIREGEG
                     VAAAVLTNLNVDLEEIQQKIEETVKKGKAGTVTGPDLPYTSRAKKVLELAMAEARELN
                     HSYVGTEHLLLGLLREEKGIAAQVLNDAGVTLEQSRAETLRLLGSDMPQAPAGGSTPA
                     PSSSAAPRSDKKSKTPALDHFCRDLTMLAAENQLDPTIGREKEIQRVMEILARRKKNN
                     PVLIGEPGVGKTAIVEGLAIMIASGNCPDVLRDHRVLSLDMAAVIAGTKYRGQFEERL
                     KAVMNEIAQNKSVILFIDELHTLVGAGAAEGAIDASNMLKPALARGELQCIGASTLNE
                     YRKYIEKDGALERRFQAVMVEPPTVEETVEILKGLRKKYEDHHRVNIPDETLTAAAQL
                     SDRYITDRFLPDKAIDVIDEAGARARLASQQPPAEVATLKGDLEKVNQDKENAVRDQN
                     FERAASLRDSERELQNQIRLRQEEWERERQIRRPIIDEEAVAFIVSRWTGIPLTRLQE
                     AETSRLLRMEEEIHTVVVGQDEAIMAVSRAIRRSRAGLKDPKRPIGSFIFCGPTGVGK
                     TELARALAKFLFADAQALIRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGTLTKAVRRR
                     PYSVVLLDEIEKAHPDVFNILLQVLDEGHLTDNYGRMIDFKNTVVIMTSNVGARDIMQ
                     GRTLGFHGGESKRKFEKMQETIKDELAKVFNPEFLNRLDDTIVFHPLDKEHIALIVTI
                     MLREVQRRLGDEIRLTRAALEFLVGKGYDESYGARPLRRAIQRFVEDPLSEKLLTGEI
                     GRGDEVEVDVAQDGDKLTFRALTGSRT"
     gene            complement(3163..4245)
                     /locus_tag="VGA78_07195"
     CDS             complement(3163..4245)
                     /locus_tag="VGA78_07195"
                     /inference="COORDINATES: protein motif:HMM:NF012443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HEX9893693.1"
                     /translation="MIDLSLVTDGGIGWLDASGPESHLVLSTRVRLARNLAGRPFPIR
                     STETDRQEVLTAVREAAAASSSLGRSTLIRIDQLSRVDRQLLHERHLVSKELAVPESE
                     LPPRSGTAVLLDGQLGSMVNEEDHLRLQGLYSGLALDAAWAGVGTLDAELGQRLAFAF
                     HPEFGYLTSCPTNVGTGLRASVLIHLPGLVLTKEINKVLQSLVQVGLTFRGLYGEGSE
                     VVGNFFQLSNQTTLGKSEAELLDHLAKIVRQVIGYEEQARQVLLRDAPGIIEDKVWRA
                     YGLLRYARTLSFDEAMNLLSGVRLGVGLGLIPDVGMYTLNKLLVFTQPAHLSAMAGVE
                     LVEDDLPVRRADYVRRALEEVAGTSR"
     gene            complement(4242..>4489)
                     /locus_tag="VGA78_07200"
     CDS             complement(4242..>4489)
                     /locus_tag="VGA78_07200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEX9893694.1"
                     /translation="TGRLGCADCYTAFEAPLRILIRRYHGSTHHHGRRHVSAEALASL
                     PQDDLVAGLREQLRLAVAGENFELAAELRDRLKELTE"
BASE COUNT          673 a         1529 c         1449 g          838 t
ORIGIN      
        1 tggaattgcc ctcgatcacc acctgggcga tggcgacccg gctgccttcg gtgatgtcga
       61 agatcagccg gaccgagccg gggccggcct cgacttcgtt caccttcacc tgggcggcgt
      121 agaagccctt cttctggtag agcgaatcaa tggcggcctt ggcccggccc acgccggcgc
      181 gatcgagggg acggccttcc agcagcacca ccttggagcg gacctggctc tcgctgacct
      241 ggtccgagcc gcggacggcc cagcgctgga gcaccgggcg ctccttgacc acgatggcga
      301 tgatgagctt ctcctgcccg ccccgctgct cgatctggac gtcgtcgaac tggccggtgg
      361 cgaacagcgc ctgaatggcc cgctggttgg tgcggtagtt gatgggctgg aacaggatga
      421 tgccggaggt ctgcacgatc tgctcggtgg acacccggcg gttgccttcc accaccaggg
      481 aatccaccgg cgggccctgc tgttgggccg ccagcggggc agccgcccag ctcagggcga
      541 ccgccagtcc cagaatgacg acccacaggc gcatgcggct ccgccagcgc accgtgcctc
      601 cccccggccg gttcaggtcc gggagccggt cagcgcgcgg aaggtgagtt tgtcgccatc
      661 ctgggcaacg tccacctcga cttcgtcgcc gcggccgatc tcgccggtca gcagtttttc
      721 gctgaggggg tcttcgacga accgctggat ggcccggcgc agcggccggg ctccatagct
      781 ctcgtcgtac cctttgccca ccaggaactc cagcgccgcc cgggtgagcc ggatctcatc
      841 gcccagccgc cgctgcactt cgcgcagcat gatggtcacg atcagggcga tgtgctcctt
      901 gtccagcggg tggaagacga tggtgtcgtc cagccggttc aggaattccg gattgaagac
      961 cttggccagc tcgtccttga tggtctcctg catcttctcg aatttccgct tcgattcccc
     1021 gccgtggaag ccgagcgtgc ggccctgcat gatgtcgcgg gcgcccacgt tcgacgtcat
     1081 gatcaccacc gtgttcttga agtcgatcat ccggccgtag ttgtcggtca ggtgaccttc
     1141 atccagcacc tgcagcagga tgttgaacac gtcggggtgg gctttctcga tctcgtcgag
     1201 cagcaccacc gagtagggcc gccgccgcac cgccttggtg agggtgcccg agtcttcgta
     1261 gcccacgtat ccgggcggcg cgccgatcag gcgcgacacc gagaacttct ccatgtactc
     1321 cgacatgtcg acccggatca gcgcctgcgc atcggcgaag aggaacttgg ccagcgcccg
     1381 ggccagctcg gtcttgccga ccccggtcgg gccgcagaag atgaacgagc cgatgggccg
     1441 cttggggtcc ttgaggccgg cccggctgcg ccggatggcc cgcgagaccg ccatgatggc
     1501 ctcgtcctgg cccaccacca cggtgtggat ctcctcttcc atccgaagca ggcgcgaggt
     1561 ttcggcctcc tgtaaccggg tcaggggaat cccggtccag cgggagacga tgaaggccac
     1621 cgcctcttcg tcgatgatgg gccggcggat ctgccgctcc cgctcccact cctcctgccg
     1681 gagccggatc tgattctgga gctcccgctc cgaatcgcgc aacgacgccg cccgctcgaa
     1741 gttctggtcc cggaccgcgt tttccttgtc ctggttgact ttctccagat cgcccttgag
     1801 ggtcgccacc tcggccgggg gctgttgcga ggccagccgg gcccgggctc cggcctcgtc
     1861 gatcacgtcg atggccttgt cgggcaggaa ccggtcggtg atgtagcggt cggaaagctg
     1921 ggccgccgcc gtcagggtct cgtcggggat attcacccgg tgatggtcct cgtacttctt
     1981 gcgcaggccc ttgaggatct cgaccgtctc ctccaccgtg ggcggctcca ccatcacggc
     2041 ctggaagcgc cgttccagcg cgccatcctt ctcgatgtac ttgcggtact cgttgagggt
     2101 cgacgcgccg atgcactgca gctcgccccg agccagcgcc ggcttgagca tgttggaggc
     2161 gtcgatggct ccttcggccg cgccggcacc caccagggtg tggagctcgt cgatgaacag
     2221 gatcacgctc ttgttctggg cgatctcgtt catgaccgcc ttgagccgct cttcgaactg
     2281 gccccggtac ttggtgcccg cgatgacggc cgccatgtcg agcgacagga cccgatgatc
     2341 ccgcagcacg tcggggcagt tgccgctcgc gatcatgatc gcgaggccct cgacgatggc
     2401 ggtcttcccc acgccgggct cgccgatcaa caccgggttg ttcttcttgc ggcgggccag
     2461 gatttccatg acccgctgga tttccttctc ccggccgatg gtaggatcga gctggttttc
     2521 ggccgcgagc atggtgagat cgcggcagaa gtgatccagc gccggggtct tggacttctt
     2581 gtcggagcgg ggcgcggcgc tggaggacgg tgccggcgtg ctgccgcccg ccggggcctg
     2641 cggcatgtcg ctgcccagca gtcgcagggt ctcggcccgg gactgttcca gggtgacgcc
     2701 ggcgtcgttc aggacctggg cggcgatgcc cttctcctcc cgcagcaggc ccagcaggag
     2761 atgttcggtg ccgacgtacg agtgattgag ctcgcgggcc tcggccatgg ccagctcgag
     2821 caccttcttg gcccgtgacg tataggggag atcgggaccg gtgacggtcc ccgccttccc
     2881 cttcttcacc gtctcctcga tcttttgctg gatttcctcc aggtcgacgt tcaggttggt
     2941 cagcaccgcg gccgcgaccc cttcgccttc ccgaatcagc ccgaggagga tgtgctcggt
     3001 gcccacgtat tcgtggtgta gccgggcggc ctcctcccgc gccatctgga ggaccttccg
     3061 gacccgatcg gtgaagttgt aaccgttcat ctatttgcct ctcggctgtc gctagtcact
     3121 cagcactagc tggtccctct acgccggcgt ctccgccttc cgctagcgac tggtgccggc
     3181 gacctcttcc agcgcccggc ggacgtagtc cgcccgtcgg accggcagat cgtcctccac
     3241 cagctccaca cccgccatcg ccgacaagtg ggctggttgg gtgaatacca gcagcttgtt
     3301 cagcgtgtac ataccgacgt ccggaatcaa gcccagcccc acacccaatc tgacgccgga
     3361 gaggaggttc atggcttcgt caaacgacag ggttcgggcg tagcgcaaca gtccgtaagc
     3421 ccgccagacc ttgtcttcga tgatccctgg cgcgtcccgc agcagaacct gcctggcctg
     3481 ctcctcgtat ccaatcacct gacgcacaat tttggccaaa tgatccagca gttccgcttc
     3541 ggacttcccc aaggtggtct gattcgataa ctggaagaag tttccgacca cttcgctgcc
     3601 ttcgccgtac aacccgcgga acgtcagccc gacctgcacc aggctttgca ggaccttgtt
     3661 gatctccttg gtgagaacca ggccggggag gtggatcagg acggaagccc ggagtccggt
     3721 tcccacgttg gtcgggcagc ttgtaaggta accgaattcg gggtgaaagg cgaacgcaag
     3781 tcgttgcccc agttcggcgt ccagcgttcc gaccccggcc caggcggcat ccagcgccag
     3841 cccggaatac agcccctgga gccgcagatg atcttcctcg ttgaccatgg accccagctg
     3901 tccatccagg aggacggctg tccccgaccg aggtggcaac tcggactcgg gaaccgccag
     3961 ctccttgctg accaggtgcc gctcgtgcag caactgccgg tcgacccggc tcaactggtc
     4021 gatccggatc agggtggagc gtcccaggct gctgctggcg gccgcggcct cccggacggc
     4081 ggtgagaacc tcctgccggt cggtctcggt gctccgaatc gggaaggggc ggccggccag
     4141 gttacgggcc aggcggaccc gggtggaaag caccaggtgg ctttcggggc cgctggcgtc
     4201 cagccagccg atgccaccgt cggtgaccag cgacaagtcg atcattcggt cagctccttg
     4261 agccggtcgc gcaactccgc ggccagctcg aaattctctc ccgccaccgc caggcggagc
     4321 tgttcccgca gcccggccac caggtcgtct tggggcagcg aagccagcgc ctcggcgctg
     4381 acgtggcgcc ggccatggtg gtgggtggag ccgtgatagc ggcggatcag gatccggagg
     4441 ggggcctcga aggccgtgta gcagtcggcg cagcccagcc gcccggtct
//
LOCUS       DASWKS010000246         6059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_110078, whole genome shotgun sequence.
ACCESSION   DASWKS010000246 DASWKS010000000
VERSION     DASWKS010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110078"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..1254)
                     /locus_tag="VGA78_07205"
     CDS             complement(40..1254)
                     /locus_tag="VGA78_07205"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893695.1"
                     /translation="MRTTRVLGNSVRALTRNRLRTFFMMLGTFVGVCALTIILAIGRE
                     TQAEVLRRFEKMFSGSTMFVRAGGGRVRMGAHGPPTTTLTLDDMKAIDREIEEVVLID
                     PMQMAGEREVVYEGRTSRIRIEGHSEAAEAIWNRSVTRGAYFTAGDVSSAARVALVGE
                     KVAGELFRGKDAVGKQIRIGVVPFQVIGVLAPMGMDPHGLDKDNEIIIPITTMLRRVR
                     NVDYLTGARLALGEGIDLDVAQARIRDLLRRRHGLVQDQEDDFHLFTPVQVRQMVKSS
                     NRIFTLFLPLVAGLSILVGGLVVANLMLMTVHDRQAEIGLRKAIGARPGDIQLQFLAE
                     SAAVTGLGGLFAVITGYIILRLLAHVQGTPAGLPWGAAALGILGAIGMGLLAGVVPAR
                     RAARLEPVQTLR"
     gene            complement(1256..1954)
                     /locus_tag="VGA78_07210"
     CDS             complement(1256..1954)
                     /locus_tag="VGA78_07210"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9893696.1"
                     /translation="MMIELVDLHRTYRKGTEEIRALDGVSLTIDRAEFVAVVGPSGSG
                     KSTLMNVMGLLDRPDSGLYRLEGRDVGSLTPDELARLRNERIGFVFQLFHLLPRTTAV
                     ENVELPLVYSDRRDTRGLGLKALERVGLADRATHLPGELSGGQQQRVAIARALVQGPD
                     LILADEPTGNLDSKSGAEILQIFRQLNGAGTTIVVITHDAQVSRYAERTIAIGDGRIL
                     SDSRAAVSVMLGGR"
     gene            complement(1951..3063)
                     /locus_tag="VGA78_07215"
     CDS             complement(1951..3063)
                     /locus_tag="VGA78_07215"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9893697.1"
                     /translation="MRSGRWIGRAVLLGFGAGAGWLAAQRAEAVGSSNATPGPLESVL
                     IERRDVGATVLATGVVRPRVGAQVAVGSRASGVVKQLYVTVGDRVIAGQLLAELDRVE
                     FEAQVERAEALRLVAASDRAWAEQEFDRARKLAPAGAASRAELAQAQRGFEIAGARER
                     EAGAALEAARIQLGYASIRAPISGVVGSVSTQEGETVAASFAAPTFLTIVDLSRLEVQ
                     AYVDETDIGRIAVGQRATFTVDTWPDETFEGRVTAVRPTAELRDNVVNYVTLIEFKNR
                     PDRLLRPEMTATINLMVEGRTDVLSVPNGALRRDTGGTYVLVNTGNAIERRAVVAGFR
                     GSEFTEATSGLQAGDRVLVGKGGGVECQAAAPSQGE"
     gene            complement(3088..3474)
                     /locus_tag="VGA78_07220"
     CDS             complement(3088..3474)
                     /locus_tag="VGA78_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893698.1"
                     /translation="MRITVVLLIALLLPLAGTVTPLAAQSHAKATALDPVGIYDLDLE
                     MHGQTTSSVLIIKREKDGRLTGTLEVHEQAISFETVVLEGKELQLSTGSELSLTLTFK
                     NDDNAVAGQWTRPDASGGVSGVRRKS"
     gene            complement(3554..3931)
                     /locus_tag="VGA78_07225"
     CDS             complement(3554..3931)
                     /locus_tag="VGA78_07225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893699.1"
                     /translation="MNRVVLATVALLILGAAVGVTTDRVLHRPHQQRMRLQEEVRDDP
                     LGVMEREIGLRPAQRTRVAAILERRQGAIDSVWQDTHVRLRATIDSLVSEIAAVLDPD
                     QAQRFRTLVEQVHSTPQFPHRRH"
     gene            complement(3928..4278)
                     /locus_tag="VGA78_07230"
     CDS             complement(3928..4278)
                     /locus_tag="VGA78_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893700.1"
                     /translation="MTEFRDLSRLPADQSYWDSLEARINAELAPLVRAAADRKPVWWK
                     PLAARAWVLGGLAAAAAAAALLLVPSRSAGEPTNPTGLLRPPDDDPALVAFLSAREPP
                     DVAALMLTAAGSDR"
     gene            complement(4275..4862)
                     /locus_tag="VGA78_07235"
     CDS             complement(4275..4862)
                     /locus_tag="VGA78_07235"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9893701.1"
                     /translation="MTADENRIGTPENPSDGALVAATLRGDERAFAHLVRRYLRKAMA
                     VALEYTETREDAEDVVQDTFRRVLESLDRFNPERTFEPWFFTILRNTARNAARHRQVR
                     DHEELAVEHASTLPGPFEQTRRGELRRKLGEAIDRLPTMQRTCFRLCLVEGLSSAEAA
                     GAIGLAESTVRVHVFKARRTLQERLAGWRDETEEA"
     gene            complement(4945..5610)
                     /locus_tag="VGA78_07240"
     CDS             complement(4945..5610)
                     /locus_tag="VGA78_07240"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9893702.1"
                     /translation="MQSISQRIACCLMLTTAASVGLAGCATKTQTGAVVGAAGGAVVG
                     GVIGKVAGSTAKGAIIGAVVGGAAGAIIGAQMDKQAEEIKEIRGAKVERVGEGIQVTF
                     ESGLLFDFDSDLLRPEAKANLRELAASLNKYPRTDLVIIGHTDQVGSVQYNQGLSMRR
                     ATSSATYLISQGVKGSRIGTYGMGETEPIATNDTEAGRAANRRIEVAIFASKEYRENP
                     GAD"
     gene            5805..6020
                     /locus_tag="VGA78_07245"
     CDS             5805..6020
                     /locus_tag="VGA78_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893703.1"
                     /translation="MTKSNLPSPYSKKDLDNARTKGQLIGWLQGGAIAVVGMILLRLI
                     GWIPTIAVVAIGGFVVYKLFSRPSRES"
BASE COUNT          993 a         2132 c         1887 g         1047 t
ORIGIN      
        1 agcgaaagcc ggagatttcg gacgacccgc atcgatcgat catcgcagcg tctggaccgg
       61 ctcgagccgg gccgctcgcc gggcaggaac cacacccgcc aggagtccca tcccgatcgc
      121 gcccagaata ccaagagcgg ccgcacccca cggcaaccct gccggagtcc cttggacgtg
      181 ggcgaggagc cgcaggatga tgtatccggt gatgaccgcg aaaaggcctc ccagtccagt
      241 caccgccgcc gactccgcaa gaaactgcaa ctggatgtct cccggccgcg ctccgatcgc
      301 cttccgcaag ccgatctcag cctgccggtc gtgcaccgtc atgagcatca ggttggccac
      361 caccagccca cccaccagga tcgagagccc ggcgaccagc ggcaggaaca gggtgaagat
      421 ccgattggag gatttcacca tctggcggac ctgcaccggg gtgaatagat ggaagtcgtc
      481 ttcctggtcc tgcaccagac catgccggcg gcggagcagg tcgcggatcc tggcctgcgc
      541 gacatccagg tcgatcccct cccccagcgc cagcctcgct cccgtgaggt agtccacatt
      601 gcgaacccgg cgcagcatgg tcgtaatggg gatgatgatc tcgttgtcct tgtcgaggcc
      661 gtgcggatcc atgcccatcg gtgccagcac cccgattacc tggaacggaa ccaccccgat
      721 ccggatctgc ttccccacgg cgtcctttcc ccggaacagc tcacccgcaa ccttctcacc
      781 caccagtgcc acccgggcgg cgctggagac atcacccgcg gtgaaatatg ccccgcgggt
      841 gaccgagcgg ttccagatgg cctcggcggc ttccgagtgt ccctcgatcc ggatccggct
      901 ggtccgcccc tcgtagacga cctcccgctc tccggccatt tgcatcggat cgatcaggac
      961 cacctcttcg atctccctgt cgatggcctt catgtcatcc agcgtgagcg tggtcgtggg
     1021 cggcccatgc gcgcccattc tcacccgtcc gccgcctgcg cgcacgaaca tggtcgaccc
     1081 gctgaacatc ttctcgaacc gccggagcac ctccgcctgt gtctccctcc cgatcgccag
     1141 gatgatcgtc aaggcgcaga ccccgacgaa ggtccccagc atcatgaaga aggtgcgaag
     1201 ccgattccga gtcagggccc ggacgctgtt gcctaagact cgagtcgtgc gcacgctatc
     1261 gtcctcccag catcacgctc accgccgcgc gagagtccga caggattcgg ccatcgccga
     1321 tggcgatggt acgctcggca taccgcgaga cctgagcatc gtgggtgatg acgacgatgg
     1381 tagtgccggc cccgttgagt tgccggaaga tctgcaggat ttcggcaccc gacttggagt
     1441 cgagattgcc ggtgggctcg tcggccagaa tcagatccgg cccttgcacc agggcccggg
     1501 caatggcaac ccgctgttgc tgccctcccg acagctcgcc cggcagatgg gtggcgcggt
     1561 cggccaagcc cacccgctcc agcgccttga gtcccagccc gcgggtgtcc cgccggtcgg
     1621 aatagaccag cggcaactcc acattctcca ccgcagtggt tcggggaagg agatgaaaca
     1681 gttggaacac gaagccgatt cgttcgttcc gaagcctggc cagctcgtcg ggcgtcaggc
     1741 ttcccacatc gcggccttcc agccggtaca gtcccgaatc gggacgatcc agcagcccca
     1801 tcacgttcat cagtgtcgac ttgccggaac cggaaggccc gacgacggcg acgaactcgg
     1861 cccgatcgat cgtcagagac acaccatcca gcgcccggat ctcctcggtg ccctttcggt
     1921 aggtgcggtg caggtccacc agctcgatca tcattccccc tgtgaaggcg ccgcggcctg
     1981 gcactcgact ccccccccct ttcccaccag aacgcgatcg ccggcctgga gtcccgatgt
     2041 cgcttcggtg aattcggagc cgcgaaagcc ggcgacgacc gcccgccgct caatcgcgtt
     2101 gccggtgttg accaggacgt aggtcccgcc cgtgtcgcgt cgcaaggcgc cgttgggcac
     2161 cgacagcacg tccgtccggc cttccaccat caggttgatg gtggcggtca tttcggggcg
     2221 gagcagccga tcgggccggt tcttgaactc gatgagcgtg acgtaattca ccacgttgtc
     2281 ccgcagctcg gcggtggggc gcaccgcggt gacgcggccc tcgaaggtct cgtcaggcca
     2341 ggtgtccacg gtgaaggtgg ctcgctgccc gaccgctatg cgaccgatgt ctgtctcgtc
     2401 cacgtaggcc tgcacttcga gccgggagag atcgacgatg gtgagaaagg ttggcgccgc
     2461 gaaactggct gcgacggtct cgccttcctg ggtcgagacc gatcccacca ccccgctgat
     2521 cggcgcgcgg atgcttgcat acccgagctg tatccgggcg gcttcgaggg cggccccggc
     2581 ttcccgctcc ctcgccccgg ctatctcgaa ccctcgctgg gcctgcgcca gctcggcgcg
     2641 agaggcagcc cccgccggtg ccagcttcct ggcccggtcg aattcctgct ccgcccacgc
     2701 tcggtcggat gccgcgacga gccggagtgc ttcggcccgt tcgacctgcg cctcgaattc
     2761 gacccgatcc agttcggcca gcaactggcc ggcgatgacc cggtcaccca ccgtgacata
     2821 cagctgcttg accacgccgg aagcgcggga gcccaccgcc acctgggccc cgacccgcgg
     2881 tcgcacgacg ccggtggcta acaccgtcgc gcccacgtca cggcgctcga tcagcacgct
     2941 ttccagcggg cccggagtcg cattgctgga cccgacggct tccgcccgct gcgcggccag
     3001 ccacccggcg ccggcaccga acccgagcag cacggcgcgc ccgatccatc gtcccgaccg
     3061 catgatgttc tcggccaaaa tgccggttca gctcttccgt cgaacgccgg agacaccgcc
     3121 gctggcgtct ggccttgtcc actgccccgc caccgcgttg tcgtcgttct tgaaggtcaa
     3181 agtgaggctc aactcggagc cggtcgacag ctggagctct ttgccttcga gcaccactgt
     3241 ttcgaagctg atcgcctgtt catggacctc gagcgtgccc gtcaaccttc cgtccttttc
     3301 ccgcttgatg atcagcacgc tgctggtcgt ctggccgtgc atttccagat ccagatcgta
     3361 gatgccgacc gggtcgagcg cggtcgcttt ggcatgggac tgggccgcga gcggcgtcac
     3421 cgttccggca agaggaagga gcaaggcaat gaggaggacg actgtgattc tcatgggggc
     3481 cacctctcgg ggaagtcaga gactgagtgc tctctgctgt accgcggagg ggcccggaat
     3541 gtttactcgg tcgctagtgc ctgcgatgcg gaaactgggg agtgctgtgg acctgctcga
     3601 ccagggttcg gaaccgttgg gcctggtcgg ggtcgaggac ggcggcgatt tcggacacca
     3661 ggctgtcgat ggtggcccgg agcctgacgt gggtatcctg ccagacggag tcgattgcgc
     3721 cttgccgacg ctctagaatc gcggcgacgc gggtgcgctg ggccggccgg aggccgattt
     3781 cgcgctccat cacgcctaac gggtcatcgc gaacttcctc ctgcaaccgc attctctgct
     3841 ggtggggccg gtgcagcacc cggtcggtgg ttacaccgac tgccgctccc aggatcagca
     3901 atgcgactgt cgccagcacc acccggttca tcggtcgctc ccggcggccg taagcatcaa
     3961 cgcagcgaca tccggaggct cccgcgcgga gaggaaggcg accagagcgg gatcgtcatc
     4021 cggcgggcga agcaatccag tagggttggt tggctcaccg gccgagcggg atggtaccag
     4081 cagcaacgcc gcggccgccg cggcggcagc cagcccgccc agcacccagg cgcgggccgc
     4141 caatggcttc caccagaccg gctttcgatc ggccgcggcg cgcaccagcg gcgccaactc
     4201 ggcattgatt ctcgcttcga gactgtccca gtagctctga tccgccggca acctcgacaa
     4261 gtcacgaaac tcggtcatgc ttcctccgtc tcgtcccgcc atcctgccag gcgctcctgc
     4321 agcgtccggc gcgccttgaa cacatgcact cgaaccgtgc tttcggccag cccgatggca
     4381 ccggcggctt cggcgctgga aaggccttct accaggcaga gccggaagca ggttcgctgc
     4441 atggtgggga gccggtcgat cgcctcgccg agcttccttc gaagctcccc tctgcgagtc
     4501 tgctcgaacg gccccggcag ggtggacgcg tgctccacgg ccagttcctc atgatcccgg
     4561 acctgccggt ggcgagcggc gttgcgggcg gtgttccgga ggatggtaaa gaaccagggc
     4621 tcgaaggtac gctcgggatt gaaccggtcg aggctctcga gcacccgccg gaaggtgtcc
     4681 tgcacgacat cctccgcgtc ctcccgcgtt tcggtgtatt ccagcgccac ggccatcgcc
     4741 ttcctgaggt atcgccggac cagatgggcg aaggcccgct cgtctccgcg cagggtcgcg
     4801 gcgacgaggg ctccgtccga tgggttctcc ggcgtaccga tgcgattctc gtccgcggtc
     4861 acctatcgct cgagctggac cgcccccgcc cccgcccccg cccccgggct gctcttcaga
     4921 gtaccaccag agcacggcgt tcgcttagtc ggcccccggg ttctctcggt actccttgct
     4981 tgcgaagatc gccacttcga tccgtcggtt cgccgcccgc ccggcctctg tatcgttggt
     5041 cgcgatgggt tcggtctctc ccatgccgta ggtcccgatg cgagatccct tcactccctg
     5101 cgagatcagg taggtcgctg acgaggtcgc gcgccgcatc gagagaccct ggttgtactg
     5161 gaccgacccg acctggtcgg tgtggccgat gatcaccaga tccgttctgg ggtatttgtt
     5221 gaggctcgcg gccagctcac gcaggttggc cttcgcttcc ggccgcagca ggtcggagtc
     5281 gaagtcgaag agcaatcccg actcgaaggt cacctggatg ccctctccga cccgctccac
     5341 tttggcgccc ctgatctcct tgatttcctc ggcctgcttg tccatctggg cgccgatgat
     5401 ggcgccggcc gccccaccca ccacggcacc gatgatggcg cccttggcgg tggagccggc
     5461 gaccttgccg atcaccccgc cgacgaccgc gccacccgcg gcgcccacga ccgcgccggt
     5521 ctgggtcttg gtcgcgcagc cggcgagacc gacggaagct gccgtcgtca gcatgagaca
     5581 gcaggcgata cgctgagaga tggattgcac cgaaacctcc tcgagtgggt cacgtgtcgg
     5641 aactggaggc cctccgcgag agcgccatca accatgggga cggctgaggg ccggttcgat
     5701 ggactgaccg agggcattac ggtaggatgg agctgacatg ggcagggcgc cgcatgacgc
     5761 gccgcccggc gcgtcgaagc agccacccaa caaccatcca ctcaatgacc aagtccaacc
     5821 tgcccagccc ctactcgaag aaggacctcg acaacgcccg taccaagggt cagctcatcg
     5881 gatggctgca gggcggggcg atcgccgtcg tcggaatgat cctcctccgg ctcatcggtt
     5941 ggatcccaac gattgccgtc gtcgcgatcg gtggcttcgt ggtctacaag ctcttctccc
     6001 ggccatcgag ggagagctga ggatagggtg acccccttct ccttgacagc ttaggagag
//
LOCUS       DASWKS010000247        10892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3089665, whole genome shotgun sequence.
ACCESSION   DASWKS010000247 DASWKS010000000
VERSION     DASWKS010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3089665"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2582)
                     /locus_tag="VGA78_07250"
     CDS             complement(<1..2582)
                     /locus_tag="VGA78_07250"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9893704.1"
                     /translation="MSLARILDAFGDTAMAQQVIADLPGRGSVRRLGGLPGSSPAVLA
                     AWLARALPQRLVVVVAPTPAEADRWLSDLVQLSDQPVGLYPQREALGEEEPHYEIAGE
                     RAETLEALLRGRLRLLVTTARATAERTRMPAALRRTRLELASGMHRPLTDVAGTLERM
                     GYRRAPMVTEVAEFSVRGGIVDVYGFGMASPARLEWWGDDIESIRAFDLTTQRSAEAL
                     VGVTVLPITAGSGEPGAGSREQGAGSREQGAGSREQAGDSPSQFPAPGSPLPAPGSPL
                     PAPSTLLELLPGDSLLIQESAGPDAEEVSRAWREAAHHLEIARRLGEEVPSRDTIFQP
                     PDAWRERLEGFPRVLLRDEPVEIMAGFLPPDRIDRDLKRLRAALSSDVPTLILCDNEG
                     QVERLDELLNEGPSVGPWVRPPVLVVGALEGGFIMPSLRVLTDHEIFRRARRLRRARR
                     YRQAAPTSVTGDLTPGDYVVHLNHGIGIYRGLTTIDIGGGTLEAAVVEYEGGDRLNVP
                     LYGLDQLERYRAAGDEDGPPPRLHRLGGSGWKRVRERAREAIKAMAAELLDLYARRRV
                     AAGYPYPHDARWQRELESSFLYEDTPDQRTATEEVKRDMERPVPMDRLLVGDVGYGKT
                     EVAVRAAFKAVQGGKQVAVLVPTTILAEQHGRTFSERLADFPVNLEVLSRFRTPKEQK
                     VALERLAAGGLDIVIGTHRLLSKDVIFKDLGLLIVDEEHRFGVKHKERLKELRLSVDV
                     LTLTATPIPRTLHLSLAGMRDLTLIETPPRDRSPILTFVEPWDDGLLEEAFARELDRG
                     GQVFVVHNRIETIETVAARVRRLAPRGQVAVAHGQMSSEDLEEVMRRFVNGEVDILVS
                     TMIV"
     gene            complement(2579..4363)
                     /locus_tag="VGA78_07255"
     CDS             complement(2579..4363)
                     /locus_tag="VGA78_07255"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HEX9893705.1"
                     /translation="MISFAAPWALAGLAAAVIPILLHLFARREPPEVEFPAVRYLSET
                     ARVHQHRLNIQHLLLLLARTLLIIALVLAAAGPTSPSGSAGSHAPTALVLMFDNSLSS
                     GATAGGVPVLDRLREVARGVFDRATPADVLWLITAEGVARRGTGGELRRVVDSLSPSP
                     RRLDLGETLGLARDLLAGERLPGEVIVVTDQQASALSPARGEGPVTVVRPDEPLAPNA
                     GVAAIATGPQPWTAAGGAVTVYLAGADTSGVPLALTVGTRRARQALAAPDRPVTLPLQ
                     VAERGWVPLTVELAPDEVRGDDRWTTVLRVAPAARVRWSDADRYLAAAFDVLRESGRV
                     VPGGDLTVGGLGPGPSLVLPPSDVAQLGSLNRALAARGVTWRYGARSSTPARTDSSTT
                     LLGSQALLRYHPLESAGSGEAGVLIRAGGIPWLVRTGDVVLAGSRFDPEWTSLPLSAE
                     FVPFLDAMVNRVVRGEIAAISAAPGDAVTLPDGTQRVGGPGGEVAVEGGALFRPALTG
                     LYFLLSGRDTLGTVSVNPDPRESVLTRATDRAVEALWRGARTVSLEQGARLAFTAAAR
                     RDLRPPLLWLALVLGVVEAGLAAWRRHQ"
     gene            complement(4360..5283)
                     /locus_tag="VGA78_07260"
     CDS             complement(4360..5283)
                     /locus_tag="VGA78_07260"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX9893706.1"
                     /translation="MRTPSTVGRERLDLLDPAEIARLGGLEVVTEGIVEGFLSGLHRS
                     PRRGFSVEFAEHRAYQLGDEPRYVDWKLLARTDRLYVKQYEEETNLRAMLVLDTSRSM
                     AWTGDADARLTKLAYARLLCASLALVLLRQRDATGLITFDDQVREVLPPRARPRHWYQ
                     LLSVLQGTKAGHGTAAEPALRRVVAQLRRRGLVVFLSDLLLERDIALKALRFLAHRGH
                     QVLVLHLMDPAEQHLEGAVEARFRDPETGQSVVLRPQDWVGVYDRTVQDNIAAWRSGL
                     RRHGIAYEVITTDAPFGVALRQALVRATGIA"
     gene            5368..6879
                     /locus_tag="VGA78_07265"
     CDS             5368..6879
                     /locus_tag="VGA78_07265"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893707.1"
                     /translation="MRLVPVLVLLLVPGVLAGQSAAVRRAAATITEADVKSRIFIIAH
                     DSMGGRDTPSPGLEMTAAYIAAEFKRFGLQPGGDSGSFIQRYPIRRTQLDTAKSEVTV
                     EGPDGGVRLRLTRDAALYQGPAKSGSWPVVLVGGPVDSLHPAVGELKGKAAIWYPDLR
                     QGMAGIRMAGRHLSRGGASTVLISVPSDSLMDAQLSPQTRIRQSAGVVSGVPWLLARE
                     SAVLIQLPQAGETIQGMRQATSFTALPVEGWTVTLSLEERVLQEQRPPNTVGILEGSD
                     PRLKHEYIVFSAHMDHVGARRSSDMPATADTIWNGADDDASGTVGVVELAEAFSRPGA
                     RPKRSLIFLTVSGEEKGLWGSDWFGANPPVPIGQIVANLNADMIGRNWKDTIVVIGRE
                     HSDLGQTLAAVNAKHPELKMTAIDDLWPEQSFYTRSDHFNFAKRGVPVLFFFNGTHSD
                     YHRPSDQPEKIDAEKEARIVQLIYWLAREIGNAPERPQWERASYAKYVTDGKQ"
     gene            7041..7256
                     /locus_tag="VGA78_07270"
     CDS             7041..7256
                     /locus_tag="VGA78_07270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893708.1"
                     /translation="MNDLILGKGNLTINRFFALDSRAYEPGALGTRTKELMGLEVFSV
                     GLVVGGSIVIPHLRRAMERLEEIRQQE"
     gene            complement(7266..8234)
                     /locus_tag="VGA78_07275"
     CDS             complement(7266..8234)
                     /locus_tag="VGA78_07275"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9893709.1"
                     /translation="MTTVRQPASPPVRPSVGPSARLTDASMLTVCLIWGVNFSVMKFL
                     LRSLPPFGLTALRFLIAGGVLWLVARWLERGTRVPARTAWALAGLGVIGNTVYQVAFI
                     SGLARTTAGNSALLIASTPIMTALLGAGLGAERITRPVGAAIGLGTLGVVLVVLGHGR
                     GLGFSPATLPGDALTLLAVVFWASFTHGVRRIGASVSPLQVATFTTLGGAPGLVLAGW
                     TDLRAQDWSAVSAASWGALLYSALLSIVVAYVIWNRSVRQIGANRTALFGITTPLFAL
                     AAAAVMLGERPSPGQLVGAVFILASVGVNVLAHWQAGADNVCEEGV"
     gene            8302..10101
                     /gene="lepA"
                     /locus_tag="VGA78_07280"
     CDS             8302..10101
                     /gene="lepA"
                     /locus_tag="VGA78_07280"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEX9893710.1"
                     /translation="MPQSRIRNFCIVAHIDHGKSTLADRLIETTGTVEKRQMREQVLD
                     TMDLERERGITIKLNAVRMVYTARDGKVYELNLIDTPGHVDFTYEVSRSLAACEGAIL
                     VVDASQGVQAQTLSNLFLAMDAGLEIIPVLNKIDLPGAEPERRAEEIMNLIGAKREEI
                     LSVSAKEGTGVPELLEAVVRRVPPPRGDPAGPLRALIFDSYYDRYRGAIASIRVVDGR
                     IKKGMQIAIGSHPSDVFEVDEVGSLQLGQRPSPSLEAGEVGYVAANLRNVRDCRVGDT
                     VIDAKHPATELLPGYRDIRSMVFAGMYPTNSEQYENLRDALEKLVLNDASLHYEPETS
                     TALGFGFRCGFLGLLHMDIVQERLEREFDLDLITTVPTVEYHVYLTSGEMMVVENPSH
                     LPEPGRIARIEEPCVKARIMSPSDYIGGIMALTQERRGIFGGMHYLDTARVEFHFELP
                     LGEILLDFYDKLKSLSRGYASLDYEMAGYRPSELVKLDMLINGEAIDAFSVIIHRDKA
                     YDWGRKVAEKLKELIPRQLFQVIIQAAIGSKIIARETVSALRKDVLAKCYGGDVTRKR
                     KLLEKQKEGKKRMKQVGTVEIPQEAFLAVLQVE"
     gene            10198..>10892
                     /locus_tag="VGA78_07285"
     CDS             10198..>10892
                     /locus_tag="VGA78_07285"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX9893711.1"
                     /translation="MAVLVIQTAFLGDVVLTTPLLIRLAEQHGPVDVLVTPAAAAVLE
                     GHPAVRELIRYDKRGRDRGLGGLLRLGRTLRSRRYQRVYLPHRSARSAALALWSGAPE
                     RIGFADGAAAWSYTRRIPRTGAHETARLAALAGPGPVPRPSLELRAADRALALCWLEQ
                     AEVHGPFTALAPGSVWATKRWPYYADLAGSLPGTVVIVGGPEDEAVGRSIVARDPSRI
                     HSAAGALPLRASAA"
BASE COUNT         1847 a         3751 c         3685 g         1609 t
ORIGIN      
        1 tccacgatca tggtggagac gagaatgtcg acctcgccgt tcacaaaccg ccgcatcacc
       61 tcttccaggt cctcactgga catctggccg tgggcgaccg cgacctggcc tcggggtgcc
      121 aggcgccgca ctctcgcggc cacggtctcg atggtctcga tccggttatg caccacgaac
      181 acctggcccc cgcgatcgag ctcgcgggcg aacgcctcct ccagcagccc gtcatcccac
      241 ggctcgacga aggtgaggat gggcgagcgg tcacggggcg gcgtctcgat cagggtgaga
      301 tcgcgcatgc cggccagcga caggtgcagg gtgcggggaa tcggcgtggc ggtgagggtt
      361 agcacgtcca ccgagagccg cagctccttg agccgctcct tgtgcttcac cccgaagcgg
      421 tgctcctcgt cgacgatcag caggcccagg tccttgaaga tcacgtcctt agagaggagc
      481 cgatgggtgc cgatcacgat atcgagcccg ccggccgcca gccgctcgag ggccaccttc
      541 tgttccttgg gcgtccggaa ccgggagagc acttccaggt tcaccgggaa atcggccagc
      601 cgctcggaga aggtgcggcc gtgctgctcg gccaagatgg tggtggggac cagcaccgcc
      661 acctgtttcc cgccctgcac cgccttgaag gccgctcgaa ccgctacctc ggtcttgccg
      721 taccccacgt cacccaccag cagccggtcc atcggtaccg gccgctccat gtcgcgcttc
      781 acttcctcgg tggcggtacg ctggtcgggc gtgtcctcgt acaggaagct ggattcgagc
      841 tcacgctgcc agcgggcatc atgggggtag ggatatcccg cggccacccg gcgccgggcg
      901 tacaagtcca gcagttcggc ggccatcgcc ttgatcgcct cacgggcccg ctcgcgaacc
      961 cgtttccagc cgctgccgcc caggcggtgc agccgaggtg gtggcccgtc ttcgtctccc
     1021 gcggcgcggt accgctccag ttgatccagg ccgtacaacg gcacgttgag ccgatcgccc
     1081 ccttcgtact caaccaccgc ggcttccagc gtgcctccgc cgatatcgat ggtggtcagc
     1141 ccacggtaga tcccgattcc gtggttcagg tgcaccacgt aatcgcccgg ggtgaggtcg
     1201 ccggtgaccg aggtgggcgc ggcctggcga tagcgccgag cccgtcgcaa ccggcgggcg
     1261 cgccggaaga tctcgtggtc ggtgagcacc cgaagcgacg gcatgatgaa gccgccctcg
     1321 agcgcgccca cgacaaggac gggcggacgg acccacggac cgacggacgg cccttcattg
     1381 agaagctcgt ccaaccgctc gacctggcct tcattgtcgc agagtatgag ggtcggcacg
     1441 tcgctgctga gggcggcgcg caagcgtttc aggtcccggt cgatccggtc gggcgggagg
     1501 aacccggcca tgatctccac cggttcatcc cgcaacagca cccgggggaa tccttccagc
     1561 cgttcccgcc acgcatccgg tggctggaag atggtgtccc ggctggggac ctcttcgcct
     1621 aaccggcgcg cgatctccag gtggtgggcc gcttcccgcc aggcccgtga cacctcttcc
     1681 gcatccgggc cggccgattc ctggatcagg agcgaatcac ccggaagcag ttctaacaac
     1741 gtggagggag cagggagcgg ggagccggga gcaggaagcg gggagccggg agcaggaaac
     1801 tgcgaggggg aatcgcctgc ctgctccctg ctccctgctc cctgctccct gctccccgcc
     1861 ccctgctccc tgctccctgc tccgggctcc ccgctccctg ccgttatggg tagtacagtt
     1921 acccctacca gcgcctcggc ggatcgctgg gtagtcaggt cgaaggcgcg gatcgactcg
     1981 atgtcgtcgc cccaccattc cagccgggcc ggcgaggcca tgccgaagcc atagacatcg
     2041 acgatccctc cccggacgct gaactcggcc acttcggtca ccatcggtgc gcgccgatag
     2101 cccatccgtt ccaacgtgcc cgcgacgtcg gtcagcgggc ggtgcatgcc cgaggcgagc
     2161 tccaaacggg ttcgccgcag tgcggcgggc atgcgggtgc gctcggccgt ggcccgcgcg
     2221 gtggtgacca gcagtcgcag ccggccccgc agcagggctt cgagcgtttc ggcccgttcg
     2281 cccgcgattt cgtagtgggg ttcttcctcg cctaacgctt cgcgctgggg atagagcccg
     2341 accggctggt cggagagctg taccagatcg gagagccagc ggtcggcttc ggcaggggtg
     2401 ggcgcgacca cgaccaccag acgttggggc aacgcgcggg cgagccaagc ggccagcacg
     2461 gccggactcg agccggggag gcccccgagt cggcgcaccg atccccggcc tggcaggtcg
     2521 gcgatcacct gctgggccat tgcggtgtcg ccgaaagcgt ccaggatccg cgccaggctc
     2581 attggtgtcg ccgccaagcc gccagcccgg cctcgacgac ccccaggacc agcgccaacc
     2641 acagcaacgg tggccggaga tcgcgccggg ccgccgcggt gaacgcgagc cgggcgccct
     2701 gctccagtga caccgtgcgc gcgcctcgcc acagggcctc gaccgcgcga tcggtggccc
     2761 gggtcagcac cgactcgcgc ggatccgggt tcacactcac cgtgcccagt gtgtcccgcc
     2821 ccgagaggag gaagtagaga ccggtaagcg ccggccgaaa caacgcgccc ccttcgaccg
     2881 ccacctcgcc gccgggacct cccacccgct gggtcccatc cggcaacgtt accgcgtcac
     2941 ccggagcggc cgagatcgcg gcgatctcgc cccgcaccac tcggttcacc atcgcgtcca
     3001 ggaaagggac gaattcagcc gacagaggga gcgaggtcca ttcgggatcg aatcggctgc
     3061 cggccagcac gacgtcgccg gtccgaacca gccacgggat tccgccggcg cgaatcagca
     3121 ccccggcttc acccgaaccg gcggactcca gcgggtggta gcgcaacaac gcctggctgc
     3181 cgagcaacgt ggtgctgctg tcggtccggg ccggagtgga ggagcgggct ccgtaacgcc
     3241 aggtgacgcc ccgcgccgcg agggcccgat tgagcgagcc cagttgagct acgtccgacg
     3301 gaggcaggac cagcgacggc ccgggcccga gcccaccgac tgtgaggtcg ccaccgggaa
     3361 cgacccggcc actttcgcgg agcacgtcga aggcggcggc aaggtagcgg tcggcgtcgc
     3421 tccatcgcac ccgcgcggcg ggcgcaaccc gcagaaccgt ggtccatcga tcgtcgcccc
     3481 gcacctcatc gggcgccagc tccaccgtga gcggaaccca gccgcgctcg gcgacctgca
     3541 gcggcagggt gaccggccgg tccggcgcgg ccagggcctg gcgggctcgc cgggtgccga
     3601 ccgtcagcgc cagtggtacg ccgctggtgt cggcgccggc caggtacacg gtgacggcgc
     3661 cacccgcggc ggtccagggc tgcggcccgg tggcgatggc ggccactccg gcgttaggcg
     3721 ccagcggttc atcgggccgg acgacggtca caggaccttc gccccgggcc gggctgagcg
     3781 cactcgcctg ctggtcggtg accacgatta cctcgcccgg caatcgttca cccgccaaca
     3841 agtcgcgggc caggcccagg gtctccccca gatcgaggcg ccggggcgat ggactcagac
     3901 tgtcgacaac ccggcggagc tcgccgcccg tgccgcgccg cgctaccccc tcggccgtga
     3961 tcagccagag cacatcagcc ggcgtggccc gatcgaacac gccgcgcgcc acctcgcgca
     4021 gccgatccag caccggcact ccgcccgccg tggccccgct gctgagtgag ttgtcgaaca
     4081 tcaggaccag cgcggtgggg gcatgactcc cggccgaacc cgagggcgaa gtgggtcccg
     4141 cggcggccag caccagggcg atgatcagga gggtccgcgc cagcagcagc agcaggtgct
     4201 gaatgttgag ccggtgctgg tggactcgcg cggtttccga gaggtagcgc accgccggga
     4261 attcgacctc gggcggctcc cggcgcgcga acaggtgaag caggatcgga atcaccgcgg
     4321 cagccaggcc ggcgagcgcc cagggcgccg cgaacgagat catgcgatcc cagtggcccg
     4381 aaccagcgcc tgccgcaacg ccacgccgaa aggcgcgtcg gtcgtgatca cctcgtacgc
     4441 gatgccgtga cgcctgagac cgctccgcca ggcggcgatg ttgtcctgca ccgtgcggtc
     4501 gtagaccccg acccagtcct ggggacgcag taccaccgac tggccggtct ccgggtcgcg
     4561 gaagcgggct tccaccgcgc cctcgaggtg ctgttcggcc ggatccatca ggtgcagcac
     4621 caggacctga tgcccgcgat gcgccaggaa gcgaagcgcc ttgagcgcga tgtcacgctc
     4681 cagcagcagg tcggagagaa acaccaccag gccacggcgc cgcagctggg ccaccacccg
     4741 gcgcaacgcc ggctcagccg ccgtcccgtg gccggccttg gtgccctgca gcaccgacag
     4801 caattggtac cagtgccggg gacgggctcg gggcggcagg acctcccgga cctgatcgtc
     4861 gaaggtgatg agaccggtgg cgtcgcgctg ccgcagcagg accagcgcca gcgaggcaca
     4921 gagcagtcgg gcgtaggcga gcttggtgag ccgggcatcg gcgtcgccgg tccaggccat
     4981 cgaccggctg gtatccagga ccagcatcgc ccggagattg gtttcttcct cgtattgctt
     5041 cacgtagagg cgatcggttc gcgccagcag cttccaatcg acatagcggg gctcgtcccc
     5101 cagctggtag gcccggtgct cggcgaattc gaccgagaag ccccgccggg gcgagcgatg
     5161 caggcccgaa aggaaccctt cgacgattcc ttccgtaacc acctccagcc cacccaggcg
     5221 agcgatctcg gcgggatcga gcaggtcgag gcgttcgcgg ccgacggtgg agggggttcg
     5281 catggaattc ggaaaataga cggaccgagg gacggacgga cagacgggcc gaccttatct
     5341 tacggggtcg attcatcctg agttcctatg cgccttgtcc cggttctcgt tctgttgctc
     5401 gttcccggcg tcctggccgg tcagtcggcg gccgtacgcc gggccgccgc caccatcacc
     5461 gaagccgacg tcaaatcccg gatcttcatc atcgcccacg attccatggg cgggcgtgac
     5521 acgcccagcc cggggctcga gatgacggcg gcctacatcg cggccgagtt caagcggttc
     5581 gggctccagc cgggagggga cagcggcagc ttcattcagc gctatcctat ccggcgcact
     5641 caactcgaca ccgcgaagtc ggaagtgacg gtggagggcc ccgacggagg ggtacggctc
     5701 cggttgacga gggatgcggc cctgtatcag ggtccagcca agtcgggatc atggccggtg
     5761 gtgctggtgg gcggaccggt cgacagcctc catcccgctg tgggggagct caagggcaag
     5821 gccgcgatat ggtacccgga tctccggcag gggatggctg ggatccggat ggcgggccgt
     5881 catttgagcc ggggtggggc atcgacggtc ctgatatcgg ttccgtccga cagcctcatg
     5941 gacgcgcagt tgtcacccca gactcgcatc cggcagtccg ccggcgtggt gtcgggagtc
     6001 ccctggctgt tggcccgcga gagcgccgtg ctgatccaac tgcctcaggc gggtgagacg
     6061 attcagggga tgcggcaggc gacctcgttc accgcgctgc cggtcgaggg gtggaccgtg
     6121 accctgagcc tcgaggaacg ggtgctgcag gagcagcgcc cgcccaacac ggtcggcatc
     6181 ctggagggga gcgatccccg gctcaagcac gagtacatcg tcttctcggc ccacatggac
     6241 cacgtcggcg cccgccgctc ctccgacatg ccggccaccg ccgacaccat ctggaacgga
     6301 gccgacgacg atgcctcggg cacggtcggc gtggtcgagt tggcggaggc cttctctcgg
     6361 ccgggcgccc ggcccaagcg gtcgctcatc ttcctcaccg tgtccggcga ggaaaaagga
     6421 ctgtggggca gcgactggtt cggcgccaac ccgccagtgc cgatcggaca gatcgtggcg
     6481 aacctgaatg ccgacatgat cggacggaac tggaaggaca ccatcgtggt catcgggcgg
     6541 gagcactccg acctgggaca gactctcgcg gccgtgaacg cgaagcatcc cgagctcaag
     6601 atgaccgcga tcgacgacct ctggccggag cagagcttct acacccggtc ggatcacttc
     6661 aacttcgcca agcgcggcgt gccggtgctc ttcttcttca acgggaccca ttccgactat
     6721 caccggccgt cggaccagcc ggagaagatc gacgcggaga aggaagcccg gatcgtacag
     6781 ctgatctact ggctggcccg ggagatcggt aacgcgccgg aacggcccca gtgggaacgg
     6841 gcgagctacg ccaagtatgt gacggacggg aagcagtgaa cagtcaccgg tgaacagtga
     6901 acggtcaaca gcaaacggtc accagtcacc gttcaccgtt caccgttcac tgttgactgt
     6961 tcaccgcgaa ccaggctcct gacgggaccc ctacgtccga ttcaccgacc atcgccgagt
     7021 tccaggagtt tcgggcccgg atgaatgacc tcatcctggg caagggcaac ctcaccatca
     7081 accggttctt cgccctcgac agccgcgcct acgagccggg ggcgctcggg acccggacca
     7141 aggagttgat gggactggag gtcttctcgg tgggactggt cgtcggtggc agtatcgtga
     7201 ttccgcatct gcggcgagct atggagcgac tggaggagat ccggcaacaa gagtgaagaa
     7261 tgcattcata cgccctcttc gcacacgtta tccgcccccg cctgccagtg cgccaagaca
     7321 ttcactccca cacttgccag aatgaacacc gcgcccacca gctggcccgg tgagggccgc
     7381 tcgcccagca tgaccgccgc cgcggcgagg gcaaagagcg gggtggtaat gccgaacaac
     7441 gcggtgcggt tggctccgat ctgcctcaca ctccggttcc agatgacgta cgcgaccaca
     7501 atggaaagca gcgcggagta gagcagcgcg ccccagctcg ctgccgagac cgcgctccag
     7561 tcctgggccc tcaaatcggt ccacccggcc agcaccagcc ccggcgctcc ccccagggtg
     7621 gtgaaggtgg ccacctggag gggtgagacc gaggcaccga tccggcgcac tccgtgggtg
     7681 aaggaggccc agaagacgac ggccagcagc gtgagcgcgt cacccggcaa ggtggcgggg
     7741 gaaaagccga ggcccctgcc atggcccagc accaccagga ccacgcccag ggtcccgagt
     7801 ccgatcgccg cgccgaccgg gcgggtgatc cgctccgctc cgagccccgc gcccagcagc
     7861 gcggtcatga tcggcgtgct ggcgatgagg agcgcgctgt tgccggcggt ggttcgcgcc
     7921 agtccgctga tgaacgcgac ctggtacacg gtattcccga tcacccccag ccccgccagg
     7981 gcccacgcgg tgcgggccgg cacccgggta ccgcgctcca gccagcgcgc gacgagccac
     8041 agcacgccac cggcaatgag aaaacgcagc gcggtcaggc cgaacggcgg gagcgatcgg
     8101 agcaggaact tcatcacgct gaagttcaca ccccagatga ggcacaccgt cagcatgctc
     8161 gcgtccgtca gacgggcgga cggaccgacg gacggacgga ccggcgggct ggcaggctgg
     8221 cggacggtgg tcacgagggg attttagcaa tgcagggctt ctaccgcccg ctggcccgcc
     8281 tgcccgtcct atattccgtg aatgccccag tcgcggattc gcaatttctg catcgtcgca
     8341 cacatcgatc acgggaaatc caccctggcg gatcgcctga tcgaaaccac cggcaccgtc
     8401 gagaaacggc agatgcggga gcaggtcctc gacaccatgg acctggagcg ggaacgcggc
     8461 atcaccatca agctcaacgc cgtccggatg gtctacaccg cgcgcgacgg caaggtctac
     8521 gagctcaacc tgatcgatac cccgggccac gtcgacttca cctatgaggt cagccggtcg
     8581 ctcgccgcat gcgagggcgc cattctggtg gtggatgcct cccagggcgt ccaggcgcag
     8641 accctctcca atctctttct ggccatggac gccggcctcg agatcatccc ggtgctcaac
     8701 aagatcgatc tgccgggcgc cgagccggag cggcgggccg aggagatcat gaacctgatc
     8761 ggcgccaagc gggaggagat cctctcggtc tcggccaagg aaggcaccgg ggtgccggag
     8821 ctgctcgagg cggtggtgcg acgggtcccg ccgccgcggg gagacccggc cgggccgctc
     8881 cgggccctga tcttcgattc gtattacgac cgatatcgcg gcgccattgc gagtatccgg
     8941 gtggtggatg gtcggatcaa gaagggcatg cagatcgcga tcggatccca tccctccgat
     9001 gtgttcgagg tggacgaagt cgggtcgttg cagctggggc agcggccatc tccctcgctg
     9061 gaagccggcg aagtgggcta cgtggccgcc aacctgcgca acgtccggga ttgccgcgtg
     9121 ggcgacacgg tgatcgacgc caagcacccg gccaccgagc tgctcccggg ctaccgcgac
     9181 atccggtcga tggtgttcgc cgggatgtat cccaccaact cggagcaata cgagaacctg
     9241 cgcgacgcgc tcgagaaact ggtgctcaac gacgcctcgc tgcactacga gccggagacc
     9301 tccaccgcgt taggcttcgg tttccgctgc ggcttcctgg gcctgctcca catggacatc
     9361 gtgcaggagc ggctggaacg cgagttcgat ctcgatctca tcaccacggt gccgaccgtg
     9421 gagtatcatg tctacctcac cagcggcgag atgatggtgg tggagaatcc cagccatctg
     9481 cccgagccgg ggcggatcgc ccggatcgag gagccctgcg tcaaggcgcg catcatgtca
     9541 ccgtcggact acatcggcgg gatcatggcg ctaacccagg agcggcgcgg catcttcggc
     9601 gggatgcact acctcgatac cgcccgggtc gagtttcact tcgagctgcc gctgggcgaa
     9661 atcctgctcg acttctacga caagctcaaa tcgctctcac gagggtacgc ctcgctcgac
     9721 tacgaaatgg cggggtaccg gccctcggag ctggtcaagc tcgacatgct gatcaacggc
     9781 gaagcgatcg acgccttcag cgtgatcatc caccgggaca aggcctatga ttggggccgc
     9841 aaggtggccg aaaagctgaa ggagctgatc ccgcgacagc tgttccaggt gatcatccag
     9901 gcggccatcg gcagcaagat cattgcccgt gaaaccgtct cggcgctccg caaggacgtg
     9961 ctggccaagt gttacggcgg cgacgtgacc cgcaaacgca agctcctgga aaaacagaag
    10021 gaaggcaaga agcggatgaa gcaggtgggc acggtggaga taccgcagga ggcgttcttg
    10081 gccgtgctgc aggtggagtg acactcacat tgacgattga cgattgacga ttacgtgagg
    10141 cgacctccgg gaagtggcgg cggcgagcaa tcgtcaatcg acaatcggca gtcgtcaatg
    10201 gctgtcctgg tcatccagac cgccttcctg ggcgacgtcg tcctcaccac tccgctgctc
    10261 atccgcctgg cagagcagca cggcccggtc gacgtgctgg tgacgccggc cgcggcggcg
    10321 gtgctcgagg gccatccggc ggttcgcgag ctgattcggt acgacaaacg gggacgcgat
    10381 cgcggcctgg gcggcctgct gcggctggga cgcaccctgc ggagccggcg ctatcagcgg
    10441 gtgtacctgc cccaccggtc ggcgcgctcc gccgccctgg ccctgtggtc gggcgcgccc
    10501 gagcggatcg ggttcgccga cggggccgcg gcttggagct acacccggcg gattccccgc
    10561 accggcgcgc acgagacggc ccggctcgcg gccctggccg gcccggggcc ggtgccgcgc
    10621 ccgtcactgg aactgagggc cgcggatcga gcgctggcgc tgtgctggct cgagcaggcg
    10681 gaggtgcacg gtccctttac cgcgctggca cccggcagcg tctgggccac caagcgatgg
    10741 ccctactacg ccgacctggc cgggtcgctc cccggcaccg tcgtcatcgt cggcgggcct
    10801 gaggatgaag cagtcggccg gagcatcgtc gcccgcgatc catcccggat tcattcggcg
    10861 gccggggcgc tgccgcttcg ggcctccgct gc
//
LOCUS       DASWKS010000248         1680 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3428130, whole genome shotgun sequence.
ACCESSION   DASWKS010000248 DASWKS010000000
VERSION     DASWKS010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3428130"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VGA78_07290"
     CDS             complement(<1..253)
                     /locus_tag="VGA78_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893712.1"
                     /translation="MAVTARPWWQGLSRLQRRRLSLAAVVVVQLSILLAVANTVLSLD
                     IVEDRREVVGGVETIHFRRELVGDIPLLVLVMAGMALPMA"
     gene            complement(346..1452)
                     /locus_tag="VGA78_07295"
     CDS             complement(346..1452)
                     /locus_tag="VGA78_07295"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9893713.1"
                     /translation="MKPDWKWLGLVLFGSVLVGACATPTPIVQTVEVPQEVTQIVEVE
                     RQVAVTPTPIGGQLTLYACLFDPDKLAVLFETFKAQYGVEVTCLDMSSGEALERIRAE
                     KDNPQGDVLFGTTNLSHVNLAADGLLEPYKGAGWNQLPDGAIKDPDGNWTGFYYGVIG
                     FACSPARLAEINAECPDSWQDLLDPIYKGEIVIASPAASGTSYTVLSGMVQLLGSEDA
                     AFEWYHQFNENVAQFTESGSAPARLAAAGEFAIGIAFAHDIQVQQDNGLDVIINFPSE
                     GTPFEIGGISILKGAKDLPAAQAWVDYVFSTAFQRYHNDVAHRIPVVAGVALAEGTVG
                     LDDVVLVEGYDPTEWAALRDPLIARWQEEIGSTR"
BASE COUNT          312 a          547 c          514 g          307 t
ORIGIN      
        1 aagccatggg aagggccatt ccggccatca ccagcaccag cagcggaatg tctcccacca
       61 gctcccgccg aaagtggatg gtctccacac cgcccaccac ctcgcgtcgg tcttcgacaa
      121 tgtccagcga aagtaccgtg ttggcgactg ccagcaggat ggacagctgc acgaccacaa
      181 ccgcagccag cgacagccgc ctgcgctgca gcctgctcag cccctgccac cagggcctgg
      241 ccgtcacagc cacgcgagtt tcctccaggg gggccggaag aacgacatgg gatacggcta
      301 ccgccggggg ggcgggttgt cccgcccccc ggcgtggtca gccaactagc gggtagagcc
      361 gatctcttcc tgccaacggg cgatcagtgg gtcacgcagg gcagcccact cggtgggatc
      421 atatccctca accaggacga catcatccag accgacggtg ccctctgcca gggcgacccc
      481 cgccaccacc gggatgcggt gggcaacgtc gttgtggtag cgctggaagg cggtggagaa
      541 cacgtagtcc acccaggcct gcgcggcagg caggtccttg gcacccttaa ggatggagat
      601 gccgccgatc tcaaacggtg tgccctccga agggaagttg atgatcacat ccaggccgtt
      661 gtcctgctgc acctggatgt cgtgggcaaa ggcgattccg atggcgaact ccccggcggc
      721 cgccaggcgg gccggcgcgc tgcccgattc ggtgaattgg gcgacgttct cgttgaattg
      781 gtggtaccac tcaaaggcag cgtcttcgct gcccagcagt tggaccatgc cgctcagcac
      841 ggtgtaggat gtgccggagg cagccgggct ggcgatcacg atctcgccct tatagatcgg
      901 atccagcaga tcctgccagg agtccgggca ttctgcattg atctccgcca gccgggcggg
      961 actgcaggca aagccgatca ccccgtagta gaagccggtc cagttgccgt ccgggtcctt
     1021 gatggcgcca tccggcaatt ggttccagcc cgcacccttg tagggctcca acaacccgtc
     1081 cgctgccaga ttgacatggg acagattggt ggtgccgaag agcacatccc cctgcgggtt
     1141 gtccttctcc gcccggatgc gctcgagcgc ttcgccgctg ctcatatcca ggcaggtgac
     1201 ttcgactccg tactgcgcct tgaaggtctc aaacagcacc gccagcttgt ccggatcgaa
     1261 caggcaggcg tatagggtga gctggccgcc gatcggggtg ggtgtgaccg cgacctgccg
     1321 ctcgacttcc acgatctggg tgacctcctg cggtacttcg accgtctgca cgatcggggt
     1381 cggggtggcg caggcgccga ccaacacgct cccaaacagc acaagaccaa gccatttcca
     1441 atcaggtttc attgaactct cctcctcgag agatcggttt atcgctttgg attccttggt
     1501 gatttgactt caatcagatc aggtggaggc tcacctccca atccctattg atcaagtgag
     1561 atcggctgac gggcccagcc ggggccgccg gaagttcctc aagccatcgt gcggggaatc
     1621 aggccctgga gaaagttgac gctcttctgg attccctcct tcgggctcat gagccggtct
//
LOCUS       DASWKS010000249        16405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1221298, whole genome shotgun sequence.
ACCESSION   DASWKS010000249 DASWKS010000000
VERSION     DASWKS010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221298"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1986
                     /locus_tag="VGA78_07300"
     CDS             <1..1986
                     /locus_tag="VGA78_07300"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX9893714.1"
                     /translation="NYDPDQASKVYAADGRLITDFGLQRRTVVALKEMSPAVTAAFLS
                     VEDKRFYRHHGVDWLRVATSFARAPKSVLTGERLQGWSTITMQLAGNLWPEAINRRER
                     TLRRKLREMRVALEIEKHYPKDKILELYLNQINLGNQAFGVETAAQRYFGKSVKYLNV
                     AEAAMLAAIPKAPSRYNPRRSPDLAVARRNLVITLMRDDGRLTAQSAEAWKAYPLQLS
                     SASDLTGHADYFVEYVRQQLDARFGTDLYRAGLRIHTTLDLDMQLAAERALEGQLEAI
                     ESGKPPYSGYRQLTYRQYLQRRNDSEERETETQGRSPYLQGALVSMEARTCYVRALVG
                     GRDFEDSKFNRATQALRQAGSTFKPFVYSAAIRAGYTFAEVVNDEPLSIPVENQANWE
                     PQNYDNTFKGPMTLRQALFDSRNTVAVQMGMRVGEDMVVAEAHRFGLTSRIPPVPSIH
                     IGAADVLLVDMVAAYTAFANLGMRCAPIAILRVEDRRGRILWQPEVEQHEVMDPQHAW
                     IMLDVLRDVVRRGTAHSAVVAGGFKYPAAGKTGTTNDYRDVWYMGFTSDLVTGIWMGF
                     DEPTKIMGNAQGGRLAGPAWTAMMKDIYERREAPPPWIQPEGLLVEMIDTKTGMRATP
                     FCPITDIATEYFIPGTEPPGYCPLHGGVRATFGPPSR"
     gene            2046..3287
                     /locus_tag="VGA78_07305"
     CDS             2046..3287
                     /locus_tag="VGA78_07305"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893715.1"
                     /translation="MPVEGEPISGGAILIGHDGRVLALGPESEVPHPAGIASEQVPDA
                     ALLPGLVNAHTHLELTGLSDAGDPADFPRWIRRVRELKERRTLEEYRAAARSGLTACW
                     RAGVSTVADTGDSGAVVEALAELGGRGVVYQEVFGPHPDQVRPSLELLERTLDRLSQF
                     TSDRVRLGVSPHAPYTVSGPLYRAVADLADRDDLPVAVHLAESRAESDLIGSGTGPFA
                     DAWQARRIPLPDDPRHLDRPFPVRTPVRWLEAQGVLGPETLGIHLVQVDPGDIAVLAR
                     HDVAVAHCPLSNAAHRHGEAPLAELLAAGLRVGVGTDSTASLETMDLMAEARAARTLA
                     GLNAPQALRLVTLEAALAIGLTDVGLIAPGAWADLIAIRVEDGRKRSKPVEGGVLEAV
                     LASTPGDVLVTWIGGKEVYRA"
     gene            3364..3918
                     /locus_tag="VGA78_07310"
     CDS             3364..3918
                     /locus_tag="VGA78_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX9893716.1"
                     /translation="MTIRCLALNASFEPITMVPMRRALRLVIDGKAEIVEADAGDHIR
                     SARLVLPRPAIIRLVKFVHVPRRFRRQVTNTFLFARDDYRCQYCHRNQAELRSRECLT
                     RDHLVPMSRGGDNEWTNVVTACSSCNTRKGNRLPNECGMHPLHPPVVPHFVHLAWSVR
                     RLTDIQAKYVRLFYGQATLRALKG"
     gene            complement(3947..4606)
                     /locus_tag="VGA78_07315"
     CDS             complement(3947..4606)
                     /locus_tag="VGA78_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893717.1"
                     /translation="MRRMLTVMLFLLLSGPAPAVAQRVRLVVADTINARGQRLPLVFT
                     PGILRDERWLESLRNSFPLRMEFRVEIWRVRPDWFDRLERWFEWEIVVQFEPLTDQYT
                     KSEAWGGALRRQTTFGSLPELERNLEVGHQIGISPSDAGEYYFTATLRLSTLTDEEME
                     ELERFLQGDPTPAERERGSVLSRAARRILLRFGGLPYDQLEGRSRRFQVGTPPPNDEL
                     R"
     gene            complement(4606..6396)
                     /locus_tag="VGA78_07320"
     CDS             complement(4606..6396)
                     /locus_tag="VGA78_07320"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9893718.1"
                     /translation="MRAKAVEAGRRRSKGVLPVPPGFVVALILALAGGTLAAQDTVNV
                     IDPNAPALPPVLRGGPPDSVVREAVGYHNDSTVTRVFGSFTIASGTGVRGNLAMFRGT
                     LRVLGRIEGRVTVINGSLIIGTGAEVAGDILLMGGRLQIQPGGRHTGASRTFADPAPV
                     FRNSAGLLEVRARAPTPGGIASVGRSFQAGKLRTTLSLETARTYNRVEGLPVRVGPTF
                     SFPTPNRGEARFDFRAVLRTESDHTDRREPIGFLARAEWESRGPTRGGIGGIWSRTVN
                     PIEDQPLSLAEVGWSTFLFGRDYRDYYEQQGAGGYVFVYPLRWLRLEASARVQKETSV
                     PASDPVALADPDLWRPNPLIDDGHFTLIRGRIDVDTRNNTITPTSGWLVQAWYERGTS
                     KDVAPITLPVEVRQPIPTFRDYHFQRIGFDARKYARINAISRVNLRVAGGGWVGGDPL
                     PVQRRLSLGGPDLLAGYGFRDQTCAPFGFTDPAQTALCDRMLTAQAELRFRFRLPLRE
                     KLASQEWLVLERLFGRDYADIVLFGDMGKAWLTGDGPGRIPNYKLPVLREFSYDAGIG
                     LDIDGLALYVATPLGDRWDPRLTLRIQRRF"
     gene            complement(6393..7763)
                     /locus_tag="VGA78_07325"
     CDS             complement(6393..7763)
                     /locus_tag="VGA78_07325"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9893719.1"
                     /translation="MSARILIVDDEANIRRMLGALLRAEGFEVAEAPGGNAALLQLEE
                     LRPDLVVLDLIMPPGPTGLEALSRLKERDPTLPVVMMSGKAQLNDAVQAIKQGAFQFL
                     EKPLTPEAVLVTIRSALELTRAQAENRALRSQLQPPPEMVGTSAAIEKVRELIAQVAP
                     TDARVLIMGESGTGKELVAHAIHHASRRASRPFVTVNCAAIPRDLVESEMFGHEKGAF
                     TGAVDRRLGRFELAHGGTLFLDEVGDLNLEAQAKLLRVLETGEVARLGAERTMRVDVR
                     VIAASNQRLDQAVAAGTFREDLFFRLHVFPIEVAPLRARLSDLPALVSHLARRIRPTA
                     ASSFTQEAMDLLAAHHWPGNVREVANIIERLAIVGGREIDAALVRQVLPRGQPVGAGS
                     GTAGAGLDPAEPFDRSLSNLLDDHERVLIARALSRANGNVAEAARLLQTDRANLYRRM
                     KRLGIQ"
     gene            complement(7797..8945)
                     /locus_tag="VGA78_07330"
     CDS             complement(7797..8945)
                     /locus_tag="VGA78_07330"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9893720.1"
                     /translation="MLVFGVLPTVVGIIGWAYYFRNQTPAIAGRIAFEEVGATGRHLL
                     RALDTTRLTREERQVLNDHSVVLNRNLRLAQQAEPFSEAMAIGLTVVILVLGSGLIYI
                     SVLITRSLSKQLSAPIDELVGWTGFLRRGEPLPATERRRGAPEFAALRQAFRDTAAEI
                     QAARAAELESERLRAFREVARRVAHEMKNPLTPVRLAVRQLQQTATPEQREVLEVLTA
                     ESGRLEKLAREFATLGRLPEGPSAEVDLAELLGELLRTSVPETVTTSLTVEEGTPRIV
                     GHYDPLRRAFANLIRNAMEAMGGSGRIDVRVGSVGYSVTVAVADHGPGVPPEKRQRVF
                     EPYYTDKAEGTGLGLSIVKQAIDHHRGSITVHETPGGGATFEVKFPIR"
     gene            9280..12306
                     /locus_tag="VGA78_07335"
     CDS             9280..12306
                     /locus_tag="VGA78_07335"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9893721.1"
                     /translation="MRFDFPLARGLLFCATLSALAGRTALGQSLTNGALRGVVLYAED
                     ASPITGVQLTVEGIDGRAVAFLESDEAGGFEVPLLAPGIYRVLAEQVGLQPVRINGVV
                     VAAGQITALSFRLERRPPPIDRVVELTLAGTSAGATLGHTVSGPALTSGDRFRPVTDI
                     SRDVTDVVRPGDGRDGWALSSGGLPATAARLWVDGLPEILTRHPALAGEPASAPLFQR
                     DALTQAQILSAGFDAEWRGYPGALLAAHTARGANQMTFRPYATGSSASLGAEAKDNPA
                     DSTGTSFQVGASLSGPIVRDTAHFAFRFDFQQQRTPSAFPWENDAATYQGAAVSLRET
                     IGSIAQDTFGVATRSAVEPAVRTWRGFSGMGRLDWRLGRHDLLFRIGYADWKEESPFL
                     LDERSNLAGAEVQSSDLSGALSVTSAWENAANELRLGLTTSKRDWLAAVLPATLLATE
                     GVAFGGSAALPGGFDTQALDVSDAVHFQVTRHRLKVGVSYTVLDYEQDYRFGSAGVFT
                     FGGLDQFGRGEGTFYQTVGGAQERAAPKISSGGVFLQDTWAASPEISLLLGLRYDRQL
                     LPENDIQLNENWLELSGLPNDVVPKDNKGWAPRIGFVWNVQGRGEWILRGGGGLFNGG
                     IDPALFSEAVLYDGAVSVRRGQGLFPSWPSAPDGQLAPNAGQLLTLFSDQYRNPRAFK
                     AGLGISRTFENGVALHLGGGYHHTDFLPRRVDLNLSTVQTGETQEGRPVYGTLVKQGG
                     LVSPVPGSNRRFEGFDLVSGIEPTGFSDYYEASVLVERQLLQGVSLSLGYTFSRTTDN
                     VLGQRTLNPADQVNPFPEGLDGDDWREGTSDFDVPHRLALSAEYRSRGTTGFSLGARW
                     RFRSGLPFTPGFQPGVDVNGDGAGNNDPAFLDANLSSALSSAGCSSGTNLFAERNSCH
                     EDAAHSLDLRASVALPVRAPDGSRLSLVLDAFNLVSSAVGIVDRAIVLVDPNGVLGVD
                     GQGNVSLPLVVNPNFGNLISRRNDPRLFRIGLRMEY"
     gene            12308..13321
                     /locus_tag="VGA78_07340"
     CDS             12308..13321
                     /locus_tag="VGA78_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893722.1"
                     /translation="MRKIDSVVWALIGAGALAAACVNEGSDLGFNTSPTRVVQVGVYL
                     DRDGSRTPVPAEGVANARLAILPRGSSDTFKTATTAGGAALGVAFFDDIPLGQWRLAV
                     DARTLGDSIQVQAIELVPDGTETDEFAVTFPSDTTTVRVRLGYPEVTIRQARALPVGR
                     RVFIRGVILAGVQSFRDTTSHIADSSGALRLTRVTLLGGLTGNNPGDSVSVLGFTSSR
                     AGQPTLDNSSVARFATTTAPVPLPVGTGTAANAANGVLDAQLVRITGAIISDTLTVAP
                     DFQFRASDGTGTLTVILDASINFPRTAFAPGRSMNAVGVLVPDGVGGWVFKPRGLGDV
                     VLN"
     gene            13346..14707
                     /locus_tag="VGA78_07345"
     CDS             13346..14707
                     /locus_tag="VGA78_07345"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9893723.1"
                     /translation="MLDRGPLELVRGLNLTMATAIVVGTMIGTGIFIKPAEIAREAGS
                     AEWALAAWVVGALLTLLGALCYMELGTMIPEAGADYAYLKRAFNPAMGFLFGWKYFAV
                     THPASMASLAAGLTLFASYLWPGLREPVGQIGSITVDVGNLFAALVIVVVTLINLLDV
                     VSVGRFQVVLTAIKIISLALVVGVGLYFAAGADSGLPAATARTVRVGGFTAAVAASLW
                     TYSGWHTLLRVGSEIQNPGRTIPRAMLGGFAVTAVLFLLVNLACFAVLGFDGVAGSSH
                     VAADLLERTLGLGGAGLLSVMMILSAFGSLNTSTLGSARITYAMARDGFLPRPLAWVH
                     PRRRIPPYSVIVSSVVAIAFVLSGTFEDLTSLFVFTQWLFYGLGVIGLFQLRRIEPDT
                     PRPVRAWGYPLMPALFVLLCSVLTVSQFAGRPVRSSVGLALILAGLPLYAWMRRKSAV
                     PTM"
     gene            14793..15299
                     /locus_tag="VGA78_07350"
     CDS             14793..15299
                     /locus_tag="VGA78_07350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893724.1"
                     /translation="MDVGKIIVGEPQRPVRDHRIDQSQAWRAMAWFTLLFVCVGLVDI
                     GLVLPTANVATPVGRFATFAGLATGLPLLTIGAIGFLMSGIGARSPAVVRSAVGLCAL
                     LALGELVGVTLMLIASSPAFAATPPAAQGAMRQAMARALVFYGVFGGAVVVACVTGLR
                     ASRGAVET"
     gene            15453..15917
                     /locus_tag="VGA78_07355"
     CDS             15453..15917
                     /locus_tag="VGA78_07355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893725.1"
                     /translation="MPASSDRLRWLAWVLGVALVTAGAASQFQTLFPVRVGDAEWEVG
                     AVGQAASSAAVGAIGWGVVVWLTLTDPRLQWLARFLGFAGVVLAVGAGFGALLVATNI
                     PLVWSAAKASENLVRAAAYKSVAVKAASLAGLYALFFLGFSAAVLRTSFTRK"
     gene            15925..>16405
                     /locus_tag="VGA78_07360"
     CDS             15925..>16405
                     /locus_tag="VGA78_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893726.1"
                     /translation="MLKKSLTLVGVLGVTLAAPASALDFSSCFTNGSLSACASAVLTD
                     LGGGHYSVVLTHDGGSAGTEFNITGFGFYDGGAGDLGQLFTLVGPVPTNWSDAPPGGT
                     TVGGTRELNLGEPNSFFFAHADCAGNPNECGLTTSGESLTFFFDLTGVLPADEDILFG
                     "
BASE COUNT         2504 a         5559 c         5498 g         2844 t
ORIGIN      
        1 aactacgatc cggatcaggc ctccaaggtg tacgcggctg acggccggct gatcaccgac
       61 ttcgggctgc agcgccggac cgtggttgcg ctcaaggaga tgtccccggc ggtcaccgct
      121 gcgtttctct cggtggaaga caagcgcttc taccggcatc acggcgtcga ttggctgcga
      181 gtggccacct ccttcgcccg cgccccaaaa tcggtgctca ccggagagcg gttacagggc
      241 tggtccacca tcaccatgca gctcgccggc aacctctggc ctgaggccat caatcggcgg
      301 gaacgcaccc tccgccggaa gctccgggag atgcgggtcg ctctcgagat cgaaaagcac
      361 taccccaagg acaagattct cgagctctac ctcaaccaga tcaacctggg gaaccaggcg
      421 ttcggggtgg agacggcggc gcagcgctac ttcggaaaat cggtcaagta cctgaacgtg
      481 gccgaggccg ccatgctggc ggcgatcccc aaggcgccct cccgctacaa tccgcggcgc
      541 agtcccgatc tggccgtggc gcggcgcaac ctcgtcatca ccctcatgcg ggacgacgga
      601 cggctcacgg ctcagtcggc cgaggcctgg aaggcgtacc cgctgcagct ctcgtcggcg
      661 tccgacctga ccggtcacgc cgattacttc gtggaatacg tccggcagca gctcgatgcc
      721 cgcttcggca ccgacctcta ccgggccggg cttcggatcc acacgaccct cgatctcgac
      781 atgcagctcg ccgcggaacg cgcgctggaa ggccagctgg aggcgatcga atcgggcaag
      841 ccgccctact ccgggtaccg tcagctgacc tatcgccagt acctccagcg ccgcaacgac
      901 agcgaagagc gcgagaccga gacccagggc cgcagcccct atctccaggg cgcgctggtc
      961 tcgatggaag ccaggacctg ttacgtgcgg gcgctggtgg gcgggcgcga cttcgaggat
     1021 tccaagttca atcgcgcgac ccaggcgctg cggcaggccg gttccacctt caagccgttc
     1081 gtctattcgg ccgccattcg cgccggctac accttcgccg aagtggtgaa cgacgagccg
     1141 ctcagcattc cggtggagaa ccaggccaac tgggagccgc agaactacga caacacgttc
     1201 aaaggcccca tgacgctgcg gcaggccctc ttcgactccc gcaatacggt cgcggtgcag
     1261 atgggaatgc gggtaggcga agacatggtg gtggccgaag cccatcggtt cggactgacc
     1321 agccggattc caccggtgcc ctcgatccac atcggcgcgg cggacgtcct gctggtcgac
     1381 atggtggcgg cctacacggc gtttgccaac ctcggcatgc gctgcgcgcc gatcgcgatc
     1441 cttcgggtcg aggatcgccg cggccggatc ctctggcagc ccgaagtgga gcagcacgag
     1501 gtgatggatc cgcagcacgc ctggatcatg ctcgacgtcc tgcgcgacgt ggttcggcgc
     1561 ggcaccgctc acagcgccgt cgttgccggc ggcttcaagt accccgccgc cggcaagacc
     1621 ggaaccacca acgactatcg cgacgtgtgg tacatggggt tcacctccga tctggtgacc
     1681 ggcatctgga tggggttcga cgaacccacc aagatcatgg ggaacgcgca gggtggaaga
     1741 ctggccggtc ccgcgtggac cgccatgatg aaggacatct acgaacgccg cgaagcgccg
     1801 cccccctgga tccagcccga aggactgctg gtggaaatga tcgacaccaa gaccggaatg
     1861 cgggcgacgc cgttctgtcc catcacggat atcgccaccg agtacttcat tcccggtacc
     1921 gagccgcccg gctactgccc cttgcatggc ggggtgcggg cgacattcgg accgccgtcc
     1981 cgatagccag cggcggcttg cccggcctag cccttcccgc ccttcgtctt gccgctccct
     2041 gggtcgtgcc cgtcgagggc gagcccatct ccggcggcgc cattctcatc ggccacgacg
     2101 gccgggtcct tgcgctcggt cccgagtcgg aggtgcccca tcccgccggt attgcatcgg
     2161 aacaggtccc cgatgcggcc ttgctgccgg ggttggtcaa cgctcatacc catctcgagc
     2221 tgaccggact cagtgacgcc ggtgatccgg ccgacttccc ccgttggatc cgccgggtcc
     2281 gcgagctcaa ggagcggcgc acgcttgagg agtatcgagc cgcggcccgc tcgggactca
     2341 ccgcgtgctg gcgggccggg gtctcgaccg tcgccgacac cggtgactcg ggagcggtgg
     2401 tcgaagcgct ggccgagctg ggcggacggg gcgttgtgta ccaggaagta ttcggccccc
     2461 atccggatca ggttcgaccc agcttggagc tgctggagcg aaccctggac cgtctgtccc
     2521 aattcaccag cgatcgggtc cgcctgggcg tctcgcccca cgccccgtac acggtcagtg
     2581 ggccgctcta tcgggcggtc gcggacctgg ctgaccgcga tgatttgccg gtggcggtgc
     2641 acctggccga atcccgggcg gaatcggacc ttatcgggtc gggaaccgga ccctttgccg
     2701 acgcctggca ggctcgacgg ataccccttc ccgacgaccc tcgccacctc gaccgcccct
     2761 tcccggtgcg cactccggtc cggtggttgg aagcgcaggg ggtgctgggt cccgagaccc
     2821 tgggtattca cctggttcag gtcgacccgg gtgacatcgc ggtgctggcc cgccacgacg
     2881 tggcagtggc ccactgcccc ctctccaacg cggcccatcg gcatggcgaa gcgccgctcg
     2941 ccgagctcct ggccgccggt ctccgggttg gggtcgggac cgattcgacg gccagcctgg
     3001 agaccatgga cctgatggcg gaggcccggg ccgcgcgaac gctggccggg ctgaatgcgc
     3061 ctcaggcctt gcgcctcgtc accctcgaag ccgcgttggc gatcggtttg accgacgtcg
     3121 gcctgatcgc gcccggggcc tgggccgatc tgatcgccat ccgggtcgaa gacggtcgaa
     3181 agcggtcgaa gccggtcgaa ggcggtgtct tagaagcggt actcgcatcc acccccggtg
     3241 acgttctcgt gacctggatc ggcggaaaag aggtctaccg ggcttgaaaa ccgctagcgg
     3301 agtgtgttag cctcagacaa cgcgtctgat gacagattgc tgacgacgga tagctgacga
     3361 ccgatgacca tacggtgcct ggcgctgaac gcctcctttg agcccatcac catggtgccc
     3421 atgcgccggg cgctgcggct ggtgatcgac ggcaaggccg agatcgtgga ggccgatgcc
     3481 ggcgaccaca tacgaagcgc gcgtctggtg cttcccagac ccgcgatcat ccggctcgtc
     3541 aagttcgtcc acgttccccg ccgcttccgc cgtcaggtca ccaacacttt cctgtttgcc
     3601 cgcgacgact accgctgcca gtactgccat cggaaccagg ccgagctgcg ttcgcgggaa
     3661 tgcctgaccc gggaccatct ggtgccgatg tcgcggggcg gggacaacga atggaccaac
     3721 gtggtgaccg cgtgctcgag ctgtaatacc cgcaagggaa accgactgcc caacgagtgc
     3781 ggcatgcacc cgttgcaccc gccggtggtg ccgcacttcg tgcacctggc gtggtcggta
     3841 cggcggctga cggacatcca ggccaaatac gttcgcctct tctacggcca ggcgacgctg
     3901 cgcgccctca aaggctgaac tccgttcacc gttcactgtt caccgttcat cgcagttcgt
     3961 cattgggcgg cggcgtcccc acctggaatc gccggctccg tccttccagc tgatcgtagg
     4021 gtaacccgcc gaaccggagc aggatccgcc gcgccgcccg gctcaggacc gagccgcgtt
     4081 cccgttccgc cggcgtggga tcgccctgga ggaatcgctc cagctcctcc atctcctcgt
     4141 cggtgagcgt gctgaggcgg agcgtggcgg tgaagtagta ctcgcccgcg tcgctggggc
     4201 tgatcccgat ctggtgaccc acttccaggt tgcgctccaa ctcgggcagt gacccgaagg
     4261 tggtctgacg ccggagcgcg ccgccccagg cctccgattt ggtgtactgg tcggtcagtg
     4321 gctcgaactg gaccacgatt tcccattcaa accaccgctc cagccgatcg aaccagtcgg
     4381 gccggactcg ccagatctcg acccggaact ccatcctgag cgggaaggag ttccggagac
     4441 tttccagcca gcgctcgtcc ctcagaattc ccggcgtgaa gaccagcgga agtcgctggc
     4501 ccctcgcatt gatggtgtcg gccaccacca gtcggacccg ttgcgccacc gccggggcgg
     4561 gcccggagag gagcaggaac agcatcaccg tcagcatccg ccgcatcaga atcgtcgctg
     4621 gatgcgaagg gtgagccggg gatcccacct atccccaagc ggtgtcgcga cgtagagcgc
     4681 cagcccatcg atgtcgagcc cgatgccggc gtcatagctg aactcgcgca gcaccggaag
     4741 cttgtagttc gggatccgac ccggcccgtc gccggtgagc caggcctttc ccatatcgcc
     4801 gaacagcacg atgtcggcgt agtcgcggcc gaagagccgc tccagcacca gccattcctg
     4861 cgaggccagc ttctccctga gcggcagccg gaaccggaac cggagctccg cctgggcggt
     4921 cagcatccgg tcgcacaacg cagtctgggc cgggtcggtg aaaccgaacg gagcacaggt
     4981 ttgatcgcgg aacccataac cggccaggag atccgggccg cctaaggaga gccggcgctg
     5041 caccggcaac gggtcgccgc cgacccagcc gccacctgcc acccgcaggt tgacccgcga
     5101 gatcgcgttg atccgggcgt actttctggc gtcgaatccg atccgctgga agtggtagtc
     5161 ccggaaggtg gggatcggct gccgcacctc caccggcagc gtgatgggcg cgacatcctt
     5221 gctggtgccc cgctcgtacc aggcctgcac cagccagccg ctggtgggcg tgatggtgtt
     5281 attgcgggta tcgacgtcga tccgccctcg gatcagcgtg aaatggccgt cgtcgatgag
     5341 cgggttgggg cgccacagat ccgggtcggc cagtgccacc gggtcggagg cagggaccga
     5401 ggtctccttc tgcacccggg ccgaggcttc cagccggagc catcgcaagg ggtagacgaa
     5461 cacgtagccg cccgccccct gctgctcgta gtagtcccgg tagtcgcgac cgaacaggaa
     5521 cgtggaccag cccacctccg ccagactgag cggctggtcc tcgatcggat tgaccgtgcg
     5581 ggaccagatg ccaccgatgc cgccccgggt cggtccccgc gactcccatt cggcccgggc
     5641 caggaagccg atcggttccc gccggtcggt atggtcggac tcggtgcgga gcaccgcgcg
     5701 gaagtcgaag cgggcttcgc cccggttggg ggtcgggaag ctgaaggtgg gccccacccg
     5761 gaccggcagg ccctcgaccc ggttataggt ccgcgccgtt tccagggaca gggtggttct
     5821 gagttttccc gcctggaagc tccggccgac cgaagcgatc ccacccgggg tgggtgcccg
     5881 ggcccgcacc tccagcaagc cggcgctatt gcggaacacc ggagccggat cggcaaaggt
     5941 ccggctggcg ccggtgtggc ggcctcccgg ctggatctgg agccgccctc ccatcaacag
     6001 aatgtcgccc gcgacttcgg cgccggttcc gatgatcagg ctgccgttga tgacggtgac
     6061 ccgtccctcg atccggccca gcacccggag ggtgccgcgg aacatcgcga gattgccgcg
     6121 gactcccgtg cccgatgcaa tggtgaagga gccgaacact cgggtgacgg tggagtcgtt
     6181 gtggtatccg accgcttcgc gcaccaccga atcgggcggc ccgcctcgga gcaccggtgg
     6241 cagcgccggg gcgttgggat cgatgacgtt gacggtatcc tgcgccgcga gcgtcccgcc
     6301 ggcgagggcg agtatcaggg cgacgacgaa accaggcggt acggggagga cccccttcga
     6361 ccgccttcgc cccgcttcga ccgccttcgc cctcattgaa tgcccagccg cttcatccgc
     6421 cggtacagat tggcccggtc ggtctgcagc agccgcgccg cctcggccac gttcccgttg
     6481 gcgcgcgaca gcgcccgcgc gatcagcacc cgttcgtgat cgtccagcag attcgacagc
     6541 gagcgatcga acggctcggc cggatcgagc ccagcccccg cggtgccgga cccggctccc
     6601 accggttgcc cccggggcag gacctggcgc accagggccg cgtcgatttc ccgtccgccc
     6661 acgatcgcca gccgttcgat gatattcgcc acctcccgca cgttaccggg ccagtgatgg
     6721 gccgcgagca gatccatggc ctcctgggtg aaggacgacg cggcggtggg ccggatccgc
     6781 cgggccagat gactgaccag ggccggcaaa tccgagagcc gagcccggag cggggcgacc
     6841 tcgatcggga agacgtgcaa ccggaaaaag aggtcttccc ggaaggtgcc ggcggccacc
     6901 gcctgatcca gccgctggtt ggaggcggcg atcacccgga catcgacccg catggtgcgt
     6961 tcggcgccca gccgggcaac ctcgccggtc tccagcaccc gcagcagctt ggcctgggcc
     7021 tcgagattga gatccccgac ttcgtccagg aagagcgtgc ctccgtgcgc cagctcgaag
     7081 cgtcccagac ggcgatccac cgcgccggtg aacgccccct tttcgtggcc gaacatttcc
     7141 gactcgacca ggtcgcgcgg aatggcggcg caattcaccg tcacgaacgg gcggctggcc
     7201 cggcggctgg cgtgatggat ggcgtgcgcc accagctcct tgccggtgcc ggattcgccc
     7261 atgatcagca cccgggcgtc ggtcggcgcc acctgggcaa tgagctcccg cactttctcg
     7321 atcgcggcgc tggtgcccac catctcgggg ggcggctgca gctgggagcg gagagcgcgg
     7381 ttctcggcct gggcccgggt cagctcgagg gcggaacgga tggtcaccag gaccgcttcg
     7441 ggtgtcagcg gtttctccag gaactgaaag gcgccctgct tgatcgcctg caccgcgtcg
     7501 ttcagctgcg ccttgccgct catcatgacg accggcagcg tcggatcgcg ttccttcagg
     7561 cggctcagag cttccaggcc ggtgggcccc ggcggcatga tcagatccag caccaccaga
     7621 tcgggccgga gctcctccag ctgcagcagc gccgcgttgc cgccgggcgc ttccgccacc
     7681 tcaaacccct ccgcgcgcag cagtgctccc agcatgcgcc ggatattggc ttcgtcgtcg
     7741 acaatcagga ttcgcgcgct catccgctca ctggtttcgg ctcgagagtc aggaggttat
     7801 cggatcggga atttgacttc aaaggtcgct ccgccaccgg gcgtctcatg gaccgtgatg
     7861 ctcccccggt ggtgatcgat cgcctgcttc acgatggaga gccctagacc ggtcccttcg
     7921 gccttgtcgg tgtaataggg ctcgaacacc cgttgccgct tctccggcgg aaccccgggt
     7981 ccgtgatccg ccactgcgac ggtgacactg tagccgacgc tgccaactcg gacatcgatc
     8041 cggccgctgc cacccatggc ctccatcgcg ttccggatca ggttggcgaa agcgcggcgc
     8101 aatgggtcgt agtgacccac gatgcggggt gttccttcct cgacggtgag cgaggtggtc
     8161 acggtttcag gtaccgaggt tcggagcagc tcgcccagca gctcggccag gtcgacttcg
     8221 gccgacggcc cctcgggcag ccggcccagc gtggcgaact cgcgggccag cttctccagc
     8281 cggcccgatt ccgcggtcag gacttccagg acctcccgct gctccggggt cgccgtctgc
     8341 tggagctgcc gcacggccag ccgaaccgga gtcagcgggt tcttcatctc gtgcgccacc
     8401 cggcgggcca cctcgcggaa ggctcgcagc cgctccgatt ccagctcggc ggcgcgggcc
     8461 gcctggattt ccgcggcagt atcgcggaac gcctgtcgca aggccgcgaa ctcgggcgcg
     8521 ccccgccgcc gctccgtggc cgggagcggc tcgcctcggc gcaggaagcc ggtccacccg
     8581 accagttcgt cgatgggagc cgagagctgt ttggaaagag agcgggtgat gaggaccgag
     8641 atgtagatca gaccgctgcc cagaaccagg atcaccaccg tgagaccgat cgccatggcc
     8701 tcgctgaagg gctcggcctg ctgggccagt ctcagattcc ggttcagaac gacggaatga
     8761 tcgttcagga cctgccgttc ctcccgggtg aggcgggtgg tgtccagcgc ccgaagcaga
     8821 tggcggcccg tggctcccac ttcctcgaac gcgatccggc cggcgatggc cggcgtctgg
     8881 ttccggaagt aataggccca accgatgatc ccgaccaccg tcggaagcac accgaaaacc
     8941 agcatcgcca ggaggatacg cttccgaaac gagagcgcag gcatccctca aacttagacg
     9001 gacagacgga ccgacggaca gacgggcagc cggaaccgac ggaccgacgg gcagtaggcc
     9061 ccagtgtggc tcacattgca attgccggat ccccaccgca ggtgtgattc ccgtggacca
     9121 cagttattct gcttgtcatc cctagttgtg ggagaatcgc cgcaggacag acggcaggta
     9181 gcctgtgaca ggccgtccgg ccggccgacc gtccggccgt ccgccctgtg gcactcctcc
     9241 tgcaccacac gcactgatcc ctgcaacgca ggagcgttga tgcgattcga cttcccgctg
     9301 gctcggggcc tcttgttctg cgccaccctg tccgccctgg cgggtcgcac ggcgttgggg
     9361 cagagcctca ccaacggtgc gctccgcggc gtcgtcctgt atgccgagga cgcctccccc
     9421 attaccgggg tccagctcac ggtcgaaggc atcgacggcc gcgcggtggc cttcctcgaa
     9481 tccgatgagg ctggcggctt cgaggtcccg ttgctggctc cgggcattta ccgggtgctg
     9541 gcagagcagg tgggcctgca gccggtgcgg atcaacggag tggtcgtggc ggcgggtcag
     9601 atcaccgcgc tgtcgttccg gctggagcgg cgtccgcccc cgatcgatcg ggtagtcgag
     9661 ctcaccctgg ccggcacatc ggccggcgcc acgcttggtc acacggtatc gggtccggcc
     9721 ctgaccagtg gagaccggtt ccgcccggtc accgacatca gccgggacgt caccgatgtc
     9781 gtgcgtcccg gcgatggtag ggacggttgg gccctttcca gcggcggatt gccggcaacc
     9841 gctgcgcggc tctgggtgga cggacttccg gagatcctga cccggcatcc cgcgctggcc
     9901 ggggagccgg cgtccgcccc gctcttccag cgcgatgcct tgacccaggc ccagatcctg
     9961 tcagccggct tcgacgcgga atggcggggg tatcccggcg ccctgctcgc ggcccacacg
    10021 gcccggggcg ccaaccagat gaccttccgg ccgtacgcca ccgggtccag cgcatcgctg
    10081 ggggcggaag cgaaagacaa tccggccgac agcaccggga cctcattcca ggtcggtgcc
    10141 tccctgagcg ggccgatcgt gcgcgatacc gcgcatttcg ccttccggtt cgacttccag
    10201 cagcaacgca ctccctccgc cttcccctgg gagaacgacg cggccacgta ccagggtgcc
    10261 gcggtctcgc tgcgggagac catcggctcg atcgcgcagg acacattcgg ggtcgcgacc
    10321 cgctccgcgg tcgagccggc ggtgagaacc tggcgtggct tcagcggtat ggggcggctg
    10381 gactggcggc tgggtcgcca cgatctcctg ttccggatcg gttacgccga ctggaaggaa
    10441 gaatccccct tcctgctcga tgagcggtcc aacctggccg gcgccgaggt gcagtcgagc
    10501 gacctgtcgg gggcgctgag cgtcacctcg gcctgggaga acgctgccaa cgagctgcgc
    10561 ctgggcctca ccaccagcaa gcgtgactgg ctggcggcgg tacttccggc caccctgctc
    10621 gcgaccgaag gcgtggcctt cggcggctcg gccgcgttac cgggcggctt cgacacccag
    10681 gcgctggacg tgagcgacgc ggtccacttc caggtcacgc gccaccgcct caaggtcggg
    10741 gtcagctaca ccgtgctcga ctacgagcag gattatcgct tcggctcggc cggcgtcttc
    10801 accttcggcg gcttggacca gttcggccgg ggtgaaggca ccttctatca gactgtgggc
    10861 ggcgcgcagg aacgggcggc gcccaagatc agcagcggtg gggttttcct gcaggacacc
    10921 tgggccgcct cgcctgagat ttccctcctg ctcggcctcc ggtacgatcg tcagctcctt
    10981 cccgagaacg acattcagct caacgagaac tggctcgagc tgtcggggct ccccaacgac
    11041 gtggtgccga aggacaacaa gggctgggct ccccggatcg gtttcgtgtg gaacgtgcag
    11101 ggccggggcg agtggatcct gcggggtggg ggcggcctct tcaatggcgg gatcgatccg
    11161 gccctgttct ccgaagcggt gttgtacgac ggtgcggtct cggtccgtcg cggccagggt
    11221 ctcttcccgt cgtggccgtc cgcacccgac gggcagctgg ctcccaacgc gggtcagctg
    11281 ctgaccctgt tcagcgacca gtaccgcaac ccccgtgcgt tcaaggccgg gctcggcatc
    11341 agccgcacct tcgagaacgg cgtcgcgctt cacctgggcg gtgggtacca ccacaccgat
    11401 tttctccccc gccgagtgga tctcaacctc tcaaccgtgc agaccggcga gacccaggag
    11461 ggtcggccgg tgtacggtac gctggtcaag cagggcggcc tggtgagccc ggtcccgggg
    11521 agcaaccggc ggttcgaggg gttcgacctg gtcagcggga tcgagccgac cggcttctcg
    11581 gattattacg aggccagcgt gctggtggag cggcagctgt tgcagggggt atcgctgtcg
    11641 ctgggctaca ctttctcccg gaccaccgac aacgtgctgg ggcagcggac gctgaacccg
    11701 gccgaccagg tgaatccgtt ccccgaaggg ctggacggtg acgactggcg cgagggcacc
    11761 agcgacttcg acgtacctca tcggctggcc ttgtcggccg aataccggtc ccggggcacc
    11821 accgggtttt cgctgggagc gcgctggcgc ttccggtccg gcctgccctt cacccccgga
    11881 ttccagccgg gcgtcgacgt caatggcgat ggcgccggga acaacgaccc ggcatttctg
    11941 gatgcgaacc tgagctccgc cctctccagc gccggatgca gcagcggcac caatctgttc
    12001 gccgagcgga acagctgcca cgaagacgcc gcccattcgc tcgacctccg ggccagcgtg
    12061 gcgctgccgg tccgcgctcc cgatggcagc cgcctgtcgc tggtgctcga tgccttcaac
    12121 ctggtctcga gcgcggtggg gatcgtcgac cgcgcgattg tgctggtgga tcccaacggc
    12181 gtcctcggcg tcgacggcca ggggaacgtg tcgctgcccc tggtggtgaa ccccaatttc
    12241 ggcaacctga tcagccgccg gaacgatccg cgtttgttcc ggatcgggct gcggatggag
    12301 tactgagatg cggaagatcg atagcgtcgt ctgggccctg atcggcgccg gggctctggc
    12361 ggccgcgtgc gtgaacgaag gctcggatct ggggttcaac accagcccca cccgggtggt
    12421 acaggtgggg gtttatctgg accgcgatgg ctcgcgtact ccggttcccg ccgaaggggt
    12481 ggcgaacgcc cggctggcca tcctgccccg cggtagcagc gacaccttca agaccgcgac
    12541 taccgccggt ggtgcagcgc tcggcgtggc cttcttcgac gacataccac tgggccagtg
    12601 gcggctggcg gtagacgccc ggaccctggg agactcgatt caggtccagg cgatcgagct
    12661 ggtgccggat ggcaccgaga ccgacgagtt cgccgtcacc ttcccgtcag acacgaccac
    12721 ggtgcgggtc cgactggggt acccggaggt caccatccgg caggcgcggg cccttccggt
    12781 gggccgccgg gtgttcattc gaggtgtgat cctcgccggg gtacagtcct tccgcgacac
    12841 caccagccac atcgccgata gctccggagc cctccggctg actcgcgtga ccctgctggg
    12901 tgggctcacc ggcaataatc ccggtgacag cgtctcggtg ctcgggttca cgtcgagccg
    12961 ggccgggcaa cccaccctcg acaactccag cgtcgcgcgg ttcgcgacca ccaccgcccc
    13021 ggtgccgttg ccggtcggga ccgggaccgc ggccaacgcc gccaacggcg tgctcgacgc
    13081 ccaattggtc cggattaccg gcgcgatcat cagcgacacg ttgacggtgg cgcccgattt
    13141 ccaatttcga gccagcgacg ggaccgggac cctgaccgtc attctggacg ccagcatcaa
    13201 cttcccgagg accgcgttcg ctcccggccg gtccatgaac gcggtcggcg tgctggtgcc
    13261 ggacggggtg ggaggctggg tgttcaaacc gcgtgggctg ggcgacgtgg tcctcaacta
    13321 gccagggccg accatcaagg aaccagtgct cgaccgcgga ccgctggagc tggtgcgcgg
    13381 cctcaacctg acgatggcca ccgccatcgt cgtgggcacc atgatcggca ccgggatctt
    13441 catcaagccg gccgagatcg cccgggaggc cgggtcggcg gaatgggccc tcgcggcgtg
    13501 ggtggtgggg gctctgctca ccttgctcgg tgccctctgc tacatggagt tggggaccat
    13561 gatccccgag gccggtgcgg actacgccta cctcaagcgg gccttcaacc cggccatggg
    13621 attcctgttc gggtggaagt acttcgcggt gacccatcca gcgtccatgg cgtcgctggc
    13681 cgcagggttg acgctcttcg ccagctacct gtggcccgga ctccgcgagc cggtgggaca
    13741 gatcgggtca ataacggtcg acgtgggaaa cctgttcgcc gcgctggtca tcgtggtggt
    13801 gaccctgatc aacctgctcg acgtggtctc ggtgggccgg tttcaggtgg ttctcaccgc
    13861 catcaagatc atctcgctgg ccctggtggt cggcgtgggc ctctatttcg ccgccggggc
    13921 cgactccgga ttgccggctg cgaccgctcg taccgtgcgg gtcggtgggt tcacggcggc
    13981 ggtggcggcc tcgctctgga cctacagcgg ctggcacacc ctgctccggg tgggaagcga
    14041 gatccagaac cccggccgca ccatcccccg ggccatgctc ggcggcttcg cggtgaccgc
    14101 ggtgctgttc ctgctggtga acctggcatg tttcgcggtc ttgggcttcg acggcgtggc
    14161 cgggtcgtct catgtcgcgg cggatctgct ggagcgcacc ctcgggctgg gcggggccgg
    14221 tctgctcagc gtaatgatga tcctgagtgc gttcggctcg ctcaacacct ccaccctcgg
    14281 gtcggcccgg atcacctatg ccatggcccg cgatgggttc ctgccgcgcc cgctggcgtg
    14341 ggttcatccc cggcggagaa ttccacccta ttcggtgatc gtctcttcgg tggtcgctat
    14401 cgccttcgtg ctcagcggca cgttcgagga tctcacctcg ctgttcgtct tcacccagtg
    14461 gctgttctac gggctgggag tgatcggcct gttccagttg cgccggatag agcccgatac
    14521 gccccgcccg gtccgggcct gggggtatcc gttgatgccg gctctgttcg tcctgttgtg
    14581 ttcggtgctg acggtctcgc agtttgcggg gcggccggtg cggtcgagcg tcgggctggc
    14641 tctgattctg gcgggtcttc cactctatgc ctggatgcgc cgcaagtccg ctgtccccac
    14701 tatgtagaat ccttccgccc gcgcttgcgg cgccctcgcg ccgggctatc ttcgccagtc
    14761 acgaagcgtt ttacggctcg ttgggaggtg gcatggacgt cgggaagatc atcgtgggcg
    14821 agccccagcg gccggtccgc gatcaccgga tcgatcagtc gcaggcgtgg agggcgatgg
    14881 cctggttcac cctcctgttc gtgtgtgtcg gcctggtcga catcgggttg gtgttgccaa
    14941 ccgccaacgt ggccacgccg gtcggccggt ttgccacctt cgccgggctg gccaccggtc
    15001 tgccgttgct cacaattggg gcgattggct ttctgatgtc cggaatcggg gcccgctcgc
    15061 cagccgtagt caggagcgcg gtgggcctct gcgccctgct ggccttgggg gagctcgtcg
    15121 gggtcacgct gatgctgatc gcgtccagtc ccgcctttgc ggcgactccg cccgcggccc
    15181 aaggcgctat gcgtcaagcc atggcgaggg cgctggtttt ctatggagtt tttggcgggg
    15241 cggtggtcgt cgcatgcgtc accggcctcc gtgcttcacg tggcgcggtc gaaacatgag
    15301 gaccgaaagc cacaatttag acgtcaatta tctggtcgat ttcactcgaa tgctgggctg
    15361 tagtacgttg attactaatc acttgcgtgt tttcgccagt ttctttgaca gcggcactgg
    15421 aattgctgac tgaaaacgag ttgagcgctg cgatgccagc atcatccgac cgcctgagat
    15481 ggcttgcgtg ggtcttgggc gttgcgctgg tgacggccgg ggcggcatcc cagttccaga
    15541 cgctgtttcc ggtgcgggtg ggtgatgcgg agtgggaagt cggggcagtc gggcaggcag
    15601 cgtccagcgc ggccgtcggt gccatcggtt ggggcgtggt ggtctggctc accctcaccg
    15661 atccgcggct gcagtggttg gcccggtttc tggggtttgc cggtgtggtg ctggcggtcg
    15721 gggccgggtt cggggcgttg ctggtcgcca ctaatatccc gctggtctgg tcggcagcga
    15781 aggcgtcgga gaatcttgtc agagcggcag cctataaaag cgtggcggtg aaggcggcat
    15841 cgctcgctgg gttgtacgcc ttgttctttc tcgggttttc agccgctgtg ttgcgtacga
    15901 gtttcactcg caagtgaggt ccgaatgctg aagaagtcct tgactctggt cggggtcctt
    15961 ggggtgacgc tcgcagcccc tgcctctgcc cttgatttca gctcctgttt caccaacggg
    16021 tcgctgagtg cctgtgcgag cgccgtcctc accgatctgg gtggcggcca ttacagtgtg
    16081 gtgttgactc acgacggtgg cagcgccggc accgagttca acatcaccgg gttcgggttc
    16141 tacgatgggg gcgccggcga tctgggccag ctgttcaccc tggtcgggcc ggtcccgacc
    16201 aactggagcg acgctccgcc cggcggcacc acggtgggcg gtacccgcga attgaacctc
    16261 ggcgagccca acagcttctt ctttgcgcac gccgactgcg cggggaaccc caacgagtgc
    16321 gggcttacca cgtcaggcga gagcctcacg ttcttcttcg atctcaccgg cgtgctgccc
    16381 gctgacgaag acatcctgtt cggct
//
LOCUS       DASWKS010000250         3681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3092054, whole genome shotgun sequence.
ACCESSION   DASWKS010000250 DASWKS010000000
VERSION     DASWKS010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3092054"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..808
                     /locus_tag="VGA78_07365"
     CDS             134..808
                     /locus_tag="VGA78_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9893727.1"
                     /translation="MRHGRFAGLVVMLWAVASAPAPGPTVTVTGNLTILDKGGKRATD
                     LADAVVWLEGRGGPTRPVRAEINTHDKQFLPRVLAVPLGSTVAFPNHDPFDHNVFSQS
                     EEATFDLGSYGRGQTRSIQFAKPGIVRVYCNVHATMSAYVLVRDGPHFTQPGADGAFT
                     FTGVTPGSYTIHVWHERGGHQVLDLEVEDGGTSGVAMRLDASGWKQRPHRNKHGKPYA
                     AEGRRY"
     gene            816..2771
                     /locus_tag="VGA78_07370"
     CDS             816..2771
                     /locus_tag="VGA78_07370"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9893728.1"
                     /translation="MSPLGLRLFGFTAVLVIAVLGGALSVIQRVAERAADTSVTRGLA
                     ASEAAISDKLDARVAQLGAVAERLAQVPANVAVVGEAIRGGDRPTLLDQANEMRDRLG
                     AEWALLTDARGILQAWSGRPDQEGDDLSLGVLVGRALAGEPSHGAWVEPSPRGDELFQ
                     AVAVPVGTPGSPPLGVLVAAAPLDSALADTLRRVTSSEILIFVRDTLNRPSVRAATLP
                     DLKGAVQAIGSDTARQRVDLESDAGRWVGAVGVVRTAGGLPVGGVVGLRSRQAELAPY
                     ARLRQAIWGVLGAGLVLALGMSALVARGITRPVLQLVTATRRVAAGDYTGTVTVDRRD
                     ELGELGQAFDLLQGELREKERLVAYLSASRGDAAPPAGGTGAPLASGRILAGRYEVLA
                     HLGSGGMGSVYRALDRELSETVALKVLHADLAQVAPSVVERFRQEIRLARRITHRNVV
                     RTHDIGQDQGLLFITMEYVEGTPLDQLIAAKQRLPVDVTVGIGKQLCRALRVAHETGV
                     IHRDIKPPNLAVDPAGFLKVMDFGIARLADTPSQPGLTQAGAVIGTPDYMAPEQFLGE
                     TIDGRTDLYAAGAVLYECLTGEGPFNAPTLTGHIARRLDRPAPDPRAIDPTIPEALGA
                     IIRTALAPKPEDRWPDAGAMLAALEAL"
     gene            2803..3513
                     /locus_tag="VGA78_07375"
     CDS             2803..3513
                     /locus_tag="VGA78_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX9893729.1"
                     /translation="MTTLPDIVSRLVYYLVFLYSTTLHEASHAWAAKLGGDLTAYHGG
                     QVSLDPRPHIRREPFGMVLLPVLSVLLSGWPIGFASAPYDPRWALRFPRRAAWMALAG
                     PGANLLLVVLSAVLIRAGGVAGVFLPPESVTFDRLATGIETGLWRGLAFFLSVSFSLN
                     LVLFALNLLPLPPLDGSAAVPLFLSSSATYRYQDFLTRNAGLSWIGIIVAWQVFDYVF
                     QPVFLVAVSLLYPGLRYS"
BASE COUNT          544 a         1203 c         1342 g          592 t
ORIGIN      
        1 ggagaccgtg aaaccggact tcgaggtcgg aggcggattg cgcggccaga gcgggcgtcc
       61 ccgccagcag caggatcagc gcgacgactg tcaagcgttg acccgctcga agcggtggca
      121 tagcatagcc agcatgagac atggtcgatt cgctggtctg gtggtgatgc tgtgggcggt
      181 ggcgtccgct cccgccccgg gaccgacggt gactgtgact ggtaacctca ccatcctgga
      241 caagggcggc aagcgcgcca ccgacctggc cgacgccgtg gtgtggctcg aagggcgagg
      301 cggtcccact cgtccggtcc gggccgagat caacacccat gacaagcagt ttcttccccg
      361 cgtgctcgcg gtgccgctgg ggagcacggt cgcgtttccc aaccacgacc cgttcgacca
      421 caacgtcttc tcgcagtccg aggaagccac cttcgatctg gggtcgtacg gacggggcca
      481 gacccgcagc atccagttcg ctaagcccgg gatcgtgcgg gtgtactgca acgtgcacgc
      541 gaccatgagc gcctacgtgc tggtgcgtga cggtccccat ttcacccagc cgggcgccga
      601 tggtgccttc accttcaccg gcgtgacccc cggttcctac accatccacg tgtggcacga
      661 gcggggtgga caccaggtgc tggatctcga agtggaggac ggcggcacct cgggcgtcgc
      721 gatgcggctc gacgccagcg ggtggaagca aagaccccac cgcaacaagc acggcaagcc
      781 ctacgcggca gagggccgcc gctattaacc ctcgcgtgtc gcctctcggt cttcgcctct
      841 tcgggttcac ggcggtgttg gtgatcgcgg tcctgggcgg ggcactgtcg gtgattcagc
      901 gcgtggccga gcgggcggcg gatacttccg tcacgcgcgg cctggcggcc tccgaggcgg
      961 cgatcagcga caagctcgac gcccgggtcg cccagctggg cgcggtggcg gaacggctgg
     1021 ctcaggtgcc ggccaatgtg gcggtggtag gggaggcgat ccggggcggt gatcgaccca
     1081 cgctgctgga tcaggccaac gagatgcgtg atcgcctggg cgccgaatgg gctctgctca
     1141 ccgatgcgcg agggattctg caggcctggt ccggccggcc cgaccaggag ggcgacgacc
     1201 tgtcgctggg cgtgctggtg gggcgagccc tggcggggga gccttcgcat ggcgcctggg
     1261 tggagccgtc gccccggggg gacgagttgt tccaggccgt ggcggtgccg gtcgggaccc
     1321 cgggctcccc gcccctcggg gtgctggtcg ccgcggcccc gctcgacagc gcgctggcgg
     1381 atacgctgag acgggtcacc agctccgaga tcctgatttt cgtgcgcgac acactcaacc
     1441 ggccttcggt ccgcgcggcc accttgccgg atctgaaggg agcggttcag gcgatcggat
     1501 cggacaccgc tcggcagcga gtcgacctgg agagcgacgc gggacgctgg gtgggtgccg
     1561 tcggcgtggt tcggaccgcg ggcggcctgc cggtcggtgg ggtggtcggt ctcaggtcgc
     1621 ggcaggcgga gctggcgccc tacgcccggc tgcgacaggc gatctggggg gtgctgggtg
     1681 ccggtctggt tctggcgtta ggcatgtcgg ccctggtggc ccgggggatc acccggccgg
     1741 tgctgcagct ggtcaccgcg acccggcggg tcgcggccgg cgattatacc ggcacggtca
     1801 cggtcgaccg gcgcgacgag ctgggggagc tggggcaggc gttcgatctg ctgcagggag
     1861 agctgcgcga gaaggagcgc ctggtggcgt atctgagcgc gtcacggggc gacgccgcgc
     1921 cgcccgcggg cggtaccggc gcgccgctcg cgagcggacg gatcctggcc ggacggtatg
     1981 aggtcctggc gcacctgggc tcgggcggca tgggaagcgt gtaccgggcg ttggaccggg
     2041 agctgagcga aaccgtggcg ctcaaggtgc tgcatgccga tctggcccag gtagcgccca
     2101 gcgtggtgga acgcttccgg caggaaatcc gcctggcgcg ccgcatcacg caccgcaacg
     2161 tggtccggac ccatgatatc gggcaggatc aggggctgct cttcattacc atggagtatg
     2221 tcgagggcac gccgctggac cagctgatcg ccgccaagca acgactgccg gtcgatgtca
     2281 ccgtgggcat cgggaagcaa ctgtgccggg ccctgcgcgt ggcgcacgaa accggtgtga
     2341 ttcatcgcga catcaaaccg cccaatctgg cggtggatcc ggccggcttt ctgaaggtga
     2401 tggacttcgg catcgcgcgc ctggccgata ctccctccca gccggggctt acccaggcgg
     2461 gtgcggtgat cgggacgccg gattacatgg cgccggagca gttcctgggc gagaccatcg
     2521 acggccggac cgatctgtac gccgccggcg ccgtactgta cgaatgcctg accggggaag
     2581 gcccattcaa cgccccgacc ctgacggggc acatcgcccg ccgcctggat cggcccgcgc
     2641 ccgatccgcg agcgatcgac cccaccattc ccgaggccct tggcgcgatc attcgtaccg
     2701 cgctggcccc caagccggaa gaccgctggc cggatgcggg ggcaatgctg gccgcactgg
     2761 aggctttatg agccgtcacc cgcgactcgc gtctcgtggc ccatgacgac cctgcctgac
     2821 atcgtcagcc gactggtcta ctacctggtc tttctctatt ccaccacgct gcacgaggcc
     2881 tcgcacgcgt gggcggccaa gctgggcggc gacctcaccg cctatcacgg cggccaggtc
     2941 tcgctcgatc cgcgccccca catccggcgg gagccgttcg gcatggtgct gctgccggtg
     3001 ctgtcggtgc tgctgtcggg atggccgatc ggcttcgcca gcgcgccgta cgatccgcgg
     3061 tgggcgctcc gctttccccg gcgcgccgcc tggatggcgc tggccggccc cggcgccaat
     3121 ctgctgctgg tggtgctctc ggccgtattg atccgggcag gcggggtcgc gggggtgttc
     3181 ctcccgcccg aatcggtcac cttcgaccgg ctcgccaccg ggatcgaaac gggcttgtgg
     3241 cgcgggctgg cgttcttcct gagcgtgagc ttttcgctga atctggtcct gttcgcgctc
     3301 aacctgctgc cgctgccgcc cctggacggt agcgcggcgg tgccgctgtt cctcagctcc
     3361 agcgccacct atcgctacca ggacttcctg acgcgcaacg ccggcctgag ctggatcggc
     3421 atcatcgtcg cgtggcaggt cttcgactac gtgttccaac cggtgtttct ggtcgccgtc
     3481 agcctcctct atcctggact gagatactcc tagacacaca aagcagggag cagggagcag
     3541 ggagcatgaa acaggaagca gggagcaggg agcaggaagc agggagcagg gagcagggag
     3601 cagggagcag ggagcaggga gcagggagca gggagcaggg agcaggaaga agacggatgg
     3661 cccccttctg attcccggct g
//
LOCUS       DASWKS010000251         4939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1610594, whole genome shotgun sequence.
ACCESSION   DASWKS010000251 DASWKS010000000
VERSION     DASWKS010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4939
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610594"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VGA78_07380"
     CDS             <1..211
                     /locus_tag="VGA78_07380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893730.1"
                     /translation="VEWADPIEKGPTDKATLIPKLKQALDGCTGAYGGTGQAAALIDN
                     LAHTNLHYGNIITYMRMLGLVPPSS"
     gene            229..1866
                     /locus_tag="VGA78_07385"
     CDS             229..1866
                     /locus_tag="VGA78_07385"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX9893731.1"
                     /translation="MIQPESLKSDSYQPWSRGRGTDVWAMLRAAVDGDLTTIKVLVAR
                     DPNLLDCEYAYYRPMHFAVRENRRDVVQFLLEAGADPMCGGNGFRPVYKPGGPGNHQW
                     PLDLARERGYTDVLALLESKIAETHKIGAEGESLAAIVRSRNVGQLSDALDARPDLID
                     AADGFGNQPIHWAVMTRQMPLIDLVLERGADINVMRPDGARPLDLTNGDYWYRGWQDV
                     PREAMRRHEVLIGYLLARGAEYDISTAAKIGDLERVRALLDQNPALANQVPPSTGYYN
                     GVPLRCAAGAGHLDVVRLLLERGANPNQPEPVAPHGGALREAIGGKHWEIVKLLLQHR
                     ANPNAMVESSGNCMWAARDAGPEILDLMASYGGVLGAEMACYAGDTAYIGALLDANPA
                     LPVHEHLREAIGNDHRDLVAMVLRHQPDVLKRMGFAAGQTLDYTRWLLERGMDPNHAN
                     WLGITPLHRFALDGNLEMAALVLEFGALLDPEDDEYSSTPLGWAARSGHKDMVEWLLA
                     RGANPRLPRDKSWARPVEWARRRGHDEIAATLRQAAG"
     gene            1985..2113
                     /locus_tag="VGA78_07390"
     CDS             1985..2113
                     /locus_tag="VGA78_07390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893732.1"
                     /translation="MRHTPENYEFPVVTEVVRGPALRQFHVLDLEGNQITFGQTFE"
     gene            2165..2959
                     /locus_tag="VGA78_07395"
     CDS             2165..2959
                     /locus_tag="VGA78_07395"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX9893733.1"
                     /translation="MTDRRFEGRVALVTGGSSGIGRATALGFAREGAAVVIASRGSER
                     GEVVRRELEALGAQAEFVPTDVADPEQVAALVRGTVERFGRLDCAFNNAATIEVGSFA
                     LTADFSEAEFDRHLASNLKSVWLCMKYEIGQMLSQGSGGAIVNTSSINGLGGVARNAL
                     YAIAKAGVLGLTKSAAQEYAGNGIRINALVGGGFRTAMLQGVFETVSPQDPAAAEAGF
                     SQMIPLGRIGWPEEAAAAVLWLCSDAASYVIGHSLIVDGGLTAPFR"
     gene            2993..3118
                     /locus_tag="VGA78_07400"
     CDS             2993..3118
                     /locus_tag="VGA78_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893734.1"
                     /translation="MAHAAVLPFVLCWWSKRRLLSLQRESITAIPVHTVRRPWIR"
     gene            3137..3487
                     /locus_tag="VGA78_07405"
     CDS             3137..3487
                     /locus_tag="VGA78_07405"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9893735.1"
                     /translation="MMTRDFVRWLFEAIDARQWDRLAEFFHPEIEYQRPGYDSLVGLE
                     AVVRFYREVRVLASGNHQVTAIAIDGTHGACWGRYLGSRRDGTPVDIEFADCYEFEDG
                     KVRRRKSFFYVPLV"
     gene            3545..>4939
                     /locus_tag="VGA78_07410"
     CDS             3545..>4939
                     /locus_tag="VGA78_07410"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX9893736.1"
                     /translation="MRSIVLLVLAQALPVTQAALLAQAARPAESVLRRIDPDWITPHV
                     RFLASDLLEGRETATRGARLAAEYVAAELESLGLEPLGTQGTFLQRIPLRHSLVDGVP
                     SLRVVGGAEPRELVYGTDFLLQPDIRQAEVTIQAPLVFVGFGLTLPAHGHDDYAGVDA
                     KGKLAVLLPGGPQGIPSDERGHATLLRAKEANALAHGAVGIVTLWPLPAETLRDRFMR
                     QLSGFSWLSEDGTPQTLYFEQGATVRLSATGAATLFTAAGASFPEVLAQLQLGKSRSF
                     DLPVELKLSARFTQVDTAGANVVGLLRGSDPALRDEYVVYTAHLDHVGMGRPVNGDSV
                     HHGALDNAGGTATLLAMARAFASLPAPPRRSVLFVAVTAEEKGILGSHYFVNNPPAPA
                     GQIVANVNMDNYLMLHPVRDLAAYGASYSTLDGVVRRALGQLGVAVSADAAPEQTIFT
                     RSDHYPFMLKGIPAV"
BASE COUNT          798 a         1625 c         1681 g          835 t
ORIGIN      
        1 cgtggagtgg gccgatccaa tcgagaaggg acccaccgac aaggcgaccc tcatcccgaa
       61 gctcaagcag gcgctcgatg ggtgtaccgg ggcgtacggc gggaccggcc aggccgctgc
      121 gttgatcgac aacctcgcgc acactaatct gcattacggc aacatcatca cctacatgcg
      181 aatgctcggc ctggtgccgc cgtcgagctg acgccctgcc cctcgcgcat gatccagcct
      241 gaatcgctca agtccgacag ctaccagccc tggtcacgag gtcgggggac ggatgtctgg
      301 gccatgctgc gcgcggccgt ggacggggac ctgacgacga tcaaggtatt ggtcgccagg
      361 gatccgaacc tgctcgactg cgagtacgcc tactaccgcc cgatgcattt cgcggtgcgg
      421 gagaaccggc gtgacgtggt gcagttcctg ctggaggcgg gcgccgatcc catgtgcggc
      481 ggcaacggtt ttcgcccggt gtacaagccc ggcggcccgg gcaaccacca gtggccgctc
      541 gatctggcgc gggaacgggg ctacaccgac gtgctcgccc tgctggaatc gaagatcgcg
      601 gaaacccaca agatcggagc cgagggcgag tcgctggcag cgatagttcg aagccggaat
      661 gttgggcagc tcagcgacgc gctcgacgcg cggccggacc tcatcgatgc cgcggatggg
      721 ttcggcaatc agccgatcca ctgggcggtg atgacccggc agatgcctct gatcgacctg
      781 gtcctcgaac ggggggctga tatcaacgtc atgcgtcccg acggggcccg gccgctggac
      841 ctcaccaacg gcgattactg gtatcgcggc tggcaggatg tacctcggga ggcgatgcgc
      901 cgccacgagg tcctgatcgg ctatcttctc gcccgaggcg cggagtatga catcagtacg
      961 gccgccaaga tcggcgacct cgagcgcgtg cgcgccttgt tggaccagaa tcctgcgctc
     1021 gccaaccagg tgccaccgtc gaccggctat tacaacggcg tgccgctgcg ttgtgctgcc
     1081 ggtgccggac acctcgatgt ggtacggctc cttctggagc ggggggccaa tcccaaccag
     1141 ccggagccgg tcgcccccca cgggggcgcg ttgcgggaag cgatcggcgg caagcactgg
     1201 gagatcgtga agctgctcct gcagcacagg gccaatccca acgccatggt cgagtcatcc
     1261 ggcaactgca tgtgggcggc tcgagatgcc ggtcccgaga ttctggacct catggcgtcg
     1321 tatggcggcg tactgggcgc ggaaatggcc tgctacgccg gcgataccgc gtacatcggc
     1381 gcgctgctcg acgccaaccc ggcgttgccg gttcatgagc acctgcggga agcgattggg
     1441 aatgaccacc gggacctcgt ggccatggtg ctgcgccacc agcccgacgt tctcaagcgc
     1501 atgggcttcg ccgcgggcca gacgctcgac tacacccgat ggctgttgga gcggggcatg
     1561 gaccccaacc acgccaactg gctcgggatt actccgttgc accgtttcgc actcgacggg
     1621 aatctcgaga tggccgccct ggtactcgag ttcggtgcgc tcctcgatcc ggaggacgac
     1681 gagtactcct ccaccccgct gggatgggcg gcccggtccg gccacaagga catggtcgaa
     1741 tggctgctgg cccgaggcgc gaacccgagg ttgccgcggg acaaatcgtg ggcccgaccg
     1801 gtcgaatggg cccggcgccg ggggcatgac gagattgcgg cgaccttgcg ccaggcggcg
     1861 ggataagcgc cgccgatccg gcccccatgc gccagcccgc gatcaccgcg ccactgagcc
     1921 gcttcctggc cgtcgccgac gtcgaccgga gcaccgcctc ttccgcgacg tccttggctt
     1981 tgaggtgagg cacacgccgg agaattacga atttccggtg gtcaccgagg tagtgcgcgg
     2041 ccccgccctg cgccagtttc acgtgctgga cctcgaaggc aaccagatta ccttcggcca
     2101 gaccttcgaa tgacgcggcg caaggccgaa gcggctcctg gattgaccaa ctgacgagac
     2161 actcatgact gaccgacgat tcgagggccg ggtggcactc gtcaccggcg gcagttccgg
     2221 tatcgggcgg gccacggccc tgggcttcgc ccgcgagggg gccgcggtgg tgatcgccag
     2281 ccggggcagc gagcgcggtg aggtcgtgcg gcgggaattg gaagcgctgg gagcccaggc
     2341 cgagttcgtt ccgaccgatg tcgcggaccc ggagcaggtg gccgccctgg tgcgagggac
     2401 cgtcgaacgg ttcgggcggc tcgactgcgc attcaacaac gccgccacca tcgaggtagg
     2461 ctccttcgcg ctcaccgcgg actttagcga ggcggagttt gatcgacacc tcgcctccaa
     2521 cctcaagagc gtctggctct gcatgaaata cgagatcggt cagatgctga gccagggcag
     2581 cggtggggca atcgtaaaca cctcctcgat caatgggctg ggcggagtgg ctcggaacgc
     2641 gctctatgcg atcgccaagg ccggcgtgct gggactcacc aaatcggcgg cgcaggaata
     2701 cgccggcaac ggcatccgga tcaatgcgct ggtgggaggc ggattccgca ccgccatgtt
     2761 gcagggagtg ttcgagacgg tctcgccgca ggatcccgcc gcggccgagg caggcttctc
     2821 ccagatgatt ccgctcgggc gcattgggtg gccggaggag gccgcggcgg cggtgctgtg
     2881 gctgtgctcg gacgccgcgt catacgtcat aggccactcg ttgatcgtcg atggtggatt
     2941 gacggcgccc tttcgatagg cagcaccggc cgaccgacgt agccttcgtc gcatggccca
     3001 cgccgccgtt ctcccgttcg tactgtgctg gtggtcgaag cggcggctgc tgtcgcttca
     3061 gcgggagagc atcaccgcca tcccagtgca tacggtgcga cgcccctgga tccggtgaca
     3121 tgcccgccaa ggactcatga tgacaaggga tttcgtgcgg tggctgttcg aggcgatcga
     3181 cgccaggcag tgggatcgcc tggcggagtt cttccatcct gagatcgaat accagcgtcc
     3241 gggctacgac tcgctggtcg ggctggaggc ggtggtccgc ttctatcgcg aggtccgggt
     3301 gctcgccagc ggcaaccatc aggtgacggc gatcgccatc gacggtactc atggcgcctg
     3361 ctggggacgt tacctcgggt cacggcggga tggaacgccg gtggatatcg agttcgccga
     3421 ctgctacgag ttcgaggacg gtaaggtcag gcggcgtaag tcgttcttct acgtgccact
     3481 ggtgtagccg atggtgctgg acgctctgct agattggatc gggacgatcc ggagggttga
     3541 gctggtgcgt tctatcgtgc tgcttgtctt ggcccaggcg ctgccggtca cccaggctgc
     3601 tctcctggcc caggctgccc ggccggccga gtcggtgctt cgccggatcg atcccgactg
     3661 gatcaccccc cacgtcaggt tcctcgccag cgacttgctc gagggccgcg agaccgccac
     3721 ccgcggcgcc cggttggccg cggagtacgt cgccgccgag ttggagagcc tgggcctgga
     3781 gccgctcggc acccagggaa cttttcttca gcgtatcccg ctccgccact cgctggtgga
     3841 cggggttcct tcactcaggg tggtcggggg ggcagagcca cgagagctgg tgtacggaac
     3901 cgactttctc ctccagcccg acatccggca agcggaagtg acgatacagg ccccgctggt
     3961 cttcgtgggg tttggcctca cgttgccggc tcacgggcac gacgactatg ccggcgtcga
     4021 tgccaagggc aagctggcgg tgctcctgcc cggcggcccc cagggcattc cttcggatga
     4081 gcggggacat gccaccctgc tccgcgccaa ggaagccaac gccctggcgc acggcgccgt
     4141 aggcatcgtc actctgtggc ccctgcccgc cgaaaccctg cgggaccggt tcatgcgtca
     4201 gttgagcggc ttctcctggc tttccgagga tggaacaccg caaacgctct atttcgagca
     4261 aggcgccacc gtccgccttt cggcgaccgg cgccgccacc ctcttcaccg cggccggggc
     4321 atcgtttccc gaggtgctgg ctcagctgca gctgggcaag agccggtcgt tcgacctgcc
     4381 ggtggagctc aagctgtcgg ctcgcttcac ccaggtggat accgccggcg cgaacgtcgt
     4441 gggcctgctc cgcggctccg accccgcgct tcgcgacgag tatgtggtgt acaccgcgca
     4501 tctcgaccac gtggggatgg gccgaccggt gaacggcgac agcgtacacc atggcgcgct
     4561 ggacaacgcg ggtggcacgg ccacgcttct ggccatggcc cgcgccttcg ccagcctgcc
     4621 cgccccgccc cggcgctccg tgctgttcgt cgcggtcaca gccgaggaga agggcatcct
     4681 ggggtcgcac tacttcgtca acaacccccc ggcaccggcc ggacagattg tggcgaacgt
     4741 gaacatggat aactacctga tgctccaccc ggtgcgcgac ctggccgcct acggcgcatc
     4801 ctactcgacc ctggatgggg tggtgcggcg cgctctcggg cagctgggtg tggcggtgag
     4861 tgcggatgcc gcaccggagc agaccatctt cacccggagc gaccactatc ccttcatgct
     4921 caagggcatt cccgccgtg
//
LOCUS       DASWKS010000252         3158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2712187, whole genome shotgun sequence.
ACCESSION   DASWKS010000252 DASWKS010000000
VERSION     DASWKS010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2712187"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VGA78_07415"
     CDS             <1..465
                     /locus_tag="VGA78_07415"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX9893737.1"
                     /translation="LWGPAIDPHQAWLLNRGLKTLAVRMERHNANGMAVAQWAEGRKG
                     IANVMYPGLPSHPDHKVAAKALEGFGGMVGLLFEGGAPGSERVLRRLKLITHAPSLAG
                     VESLVSEPRATSHRQLTPEQRAAMGFPDGYVRLSCGIEDAEDIIADLDQALG"
     gene            470..1159
                     /gene="ftsE"
                     /locus_tag="VGA78_07420"
     CDS             470..1159
                     /gene="ftsE"
                     /locus_tag="VGA78_07420"
                     /inference="COORDINATES: protein motif:HMM:TIGR02673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEX9893738.1"
                     /translation="MIRFNHVSKSFPNGAVALRDVTFHVPKGQFLFLTGHSGAGKSTI
                     LTLISAHDRPTTGEVKVAALSLSTIKQRDIPRLRRRLGIVFQDFRLLEYRNAEENVAF
                     ALEVTGAPRHSIQSRVMRVLTQVGLASKARAYPKELSGGEQQRVAIARALVNDPPILL
                     ADEPTGNLDERASRSVFQLLRDINAGGTSVIMATHNLELVRQTNYRAIELKAGQIVYD
                     SADEPLEEIAP"
     gene            1156..2025
                     /locus_tag="VGA78_07425"
     CDS             1156..2025
                     /locus_tag="VGA78_07425"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HEX9893739.1"
                     /translation="MRLVTREALLSFRRTPILSALSVAAIAFSLFTTGLYALVALNFS
                     NALEGLAERVEIVAFLMRGTPAETVTLASQDIAAFPEVLEVSYVSEDEALVRAQRELE
                     EFREAYKDLAANPLPASLEIQLKPPYRGAQAVRQVADRLAGFPFIDDVRYGREWVERL
                     DNLRRLASVVQLVIGLTFALVAIAIIGVTIRITVFQRAREIAIMRLVGATNRFIRGPF
                     VLEGALKGILGGGLALLLCWGGYMLFRTGLGTELPDLKFFTPGDMMLILLFGTLLGLV
                     GSLVSVGRHLRAV"
     gene            2067..>3158
                     /locus_tag="VGA78_07430"
     CDS             2067..>3158
                     /locus_tag="VGA78_07430"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX9893740.1"
                     /translation="MPSAVPCAARCALCAWNRTQHRTPGTWNLVRGTLLLLLALSPMS
                     LVGQQPTELERSRRRIQEIRAEREQLQRQQTRLQGQLRDVTTELRNLERQRDVTNRLV
                     NEIERQISGLGTQLDQTSAELILAQDNLAERRAVLNRRLVDIYKRGPLYTWRVLLTAE
                     SFGDLLSRYKYLFLTSRQDRAILTDVQRLNDRIGRHRTQLSDVLSQLDNRRSERESEL
                     RQFAALAVERERRLRGLTRTSQETRARISTLERDETRLNDILVNLERRRVARPASPTA
                     GSMTTEDIGRLDWPVQGRIVYQFGRDTLPAGGVIRWNGIGIGAALGTPVKAVEAGRVA
                     LVQRLSTYGLTVILEHGAEYYSVYSQLATA"
BASE COUNT          518 a         1068 c         1074 g          498 t
ORIGIN      
        1 ctctggggtc cggcgatcga cccccaccag gcctggctgc tcaatcgcgg gctcaagacc
       61 ctggcggttc ggatggaacg gcacaacgcc aacgggatgg cggtggctca atgggccgag
      121 gggcgcaagg gcatcgccaa cgtgatgtat cccgggttgc cctcccaccc cgaccacaaa
      181 gtggcggcga aagcgctcga gggcttcggc ggtatggtcg gcctgctctt tgaaggcggg
      241 gcgcccggca gtgagcgggt gctgcgccgg ctcaagctga tcacccatgc gcccagtctg
      301 gccggggtgg agagcctggt ctccgaaccc cgggccacgt cccaccggca gctgacgccc
      361 gagcagcgcg cggccatggg ctttcccgac ggctacgtgc ggctgtcgtg cggcatcgaa
      421 gacgcggagg acatcatcgc cgatctggac caggcgctgg gatgatcgcg tgatccggtt
      481 caatcacgtc agcaagagct ttcccaacgg tgcggtggcg ctccgggacg tgacctttca
      541 cgtgcccaag ggccagtttc tttttctgac gggccattcg ggcgccggca agtcgaccat
      601 cctgaccctg atctcggccc acgaccgccc caccaccggc gaggtgaagg tcgccgcgct
      661 cagcctcagc accatcaagc agcgcgatat cccgcggttg cggcggcggc tcggcatcgt
      721 gttccaggat ttccggctgc tggaataccg taacgccgaa gagaacgtgg ccttcgccct
      781 cgaggtcacc ggtgcgccgc gccactcgat ccagagccgg gtcatgcggg tgctcaccca
      841 ggtcgggctc gcgtccaagg cccgggccta tcccaaggag ctctccggcg gcgagcagca
      901 acgggtggcg atcgcccggg cgttggtgaa cgatccgccg attctgctgg cagacgagcc
      961 caccggcaac ctggacgagc gggcttcccg aagcgtgttc cagttgttgc gcgatatcaa
     1021 cgccggcggc acctcggtca tcatggcgac ccataacctg gagctggtgc ggcagaccaa
     1081 ctaccgcgcg atcgagctca aggcaggaca gatcgtctac gacagcgccg acgagccgct
     1141 ggaggagatc gcgccatgag actggtcacc cgggaggcct tgctgtcctt ccgccggacc
     1201 ccgatcctct ccgccctgtc ggtagccgcg atcgccttct cgctgttcac cacaggcctg
     1261 tacgccctgg tggccctcaa tttcagcaac gccctggagg gactggccga gcgggtggag
     1321 atcgtggcgt tcctgatgcg gggcacccca gccgaaaccg tcacgctggc gtcgcaggac
     1381 atcgcggcgt ttccggaagt gctcgaggtg agctacgtga gcgaggacga ggccctggtg
     1441 cgggcccagc gggagctgga ggagttccgc gaggcctaca aggacctggc ggccaacccc
     1501 cttcccgcct cactcgagat ccagctcaag ccgccctacc ggggcgccca ggcggtgcgt
     1561 caagtcgccg accggctggc gggtttccct ttcatcgacg atgtccgcta cggccgggaa
     1621 tgggtagagc ggctcgacaa cctgcgccgg ctggcctcgg tggtgcaact ggtcatcggc
     1681 ctcacctttg ccctggtggc catcgccatc atcggcgtga ccatccggat cacggtcttt
     1741 caacgggccc gcgagatcgc catcatgcga ctggtggggg cgaccaaccg gttcatccgc
     1801 ggtcccttcg tgctcgaggg cgcgctcaag gggatcctgg ggggcgggct ggccctgctg
     1861 ctgtgctggg gcggctacat gctgttccgc accggcctcg gcaccgaact gcccgatctc
     1921 aagttcttca cccccggcga catgatgctg atcctgctgt tcggtacgct gctgggactg
     1981 gtgggaagtt tggtgagcgt gggaagacat ctgagagcgg tgtgagggca cgttccgggt
     2041 tccgggttcc aggtaccgtt ggtgcggtgc cgagtgcggt gccgtgtgcc gcacggtgtg
     2101 cactgtgcgc ttggaaccgc acccagcacc gcacccccgg aacgtggaac ctggtacggg
     2161 gaaccctgct gctgctgctc gccctctcgc cgatgtcgct ggtcggacag cagccgaccg
     2221 agctggaacg ctcccgccgc cggatccagg agataagggc cgaacgggaa cagctccagc
     2281 gtcagcagac ccgcctccag ggccagctgc gggacgtaac gaccgagctc cgcaacctgg
     2341 agcggcagcg cgacgtcacc aatcgcctcg tcaacgagat cgagcgccag atcagcggac
     2401 tgggcaccca gctggaccag accagcgccg agctgatcct ggcccaggac aacctggcgg
     2461 agcggcgggc ggtgctcaac cgccgactgg tggacatcta caagcgcggc ccgctgtaca
     2521 cctggcgggt cctgctcacc gccgagtcct tcggcgatct gctatcgcgc tacaagtatc
     2581 tgttcctcac cagccggcag gaccgggcca tcctgaccga cgtgcagcgg ctcaacgacc
     2641 ggatcggccg gcaccggacc cagctgagcg acgtgctctc gcaactcgac aaccgccggt
     2701 cggagcgcga gtcggagctg cgccagttcg ccgcgctggc ggtggagcgg gagcgacggc
     2761 tccggggtct gacccgcacc agccaggaga cccgggcccg gatctccacc ctggaacgcg
     2821 acgaaacccg gctcaacgac atcctcgtca acctggagcg gcgccgggtg gcccggcctg
     2881 cctcgccgac cgccggcagc atgaccaccg aggacattgg acggctggac tggccggtcc
     2941 agggtcgaat cgtctaccag ttcggacgcg atacgctgcc ggccggagga gtgatccggt
     3001 ggaacggcat cggcatcggc gcggcactgg gcaccccagt gaaagcggtg gaggcggggc
     3061 gggtggcgct ggtgcaacgc ctcagcacct atggcttgac ggtgatcctg gagcacgggg
     3121 cggagtacta ctcggtgtac agccagctgg cgaccgcg
//
LOCUS       DASWKS010000253         4394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2712916, whole genome shotgun sequence.
ACCESSION   DASWKS010000253 DASWKS010000000
VERSION     DASWKS010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4394
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2712916"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..4324)
                     /gene="rpoC"
                     /locus_tag="VGA78_07435"
     CDS             complement(251..4324)
                     /gene="rpoC"
                     /locus_tag="VGA78_07435"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX9893741.1"
                     /translation="MVIEPGKLDVDPHQLIDEDEYLALRAKAREEGDVGFKADLGAPA
                     VRTLLERIDVKKLADELRHGIAKETSQHRKKQMLKRLKIVDAFLSSGDNGELPNNPAW
                     MVMDVIPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLQKLIQHKAPEVILRN
                     EKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGR
                     SVIVVGPELRLHQCGLPKTMAVELFKPFIINKLVEKGIAETVKRAKKIVEREGPEVYE
                     ILEEIIQDHPVLLNRAPTLHRLGIQAFEPKLVEGKAIRIHPLVCAAFNADFDGDQMAV
                     HVPLSFEAQLEARLLMVSSNNILKPSDGRPIAEPSQDMVLGCYFLTKLPPGFEEEIRK
                     GGVKQEETRERLWKPAPFFGSLAELEMALLHGRVTHQTAIRFWFVPPRESADPRARWI
                     RTTVGRVLFNNILPRKVVAELGFRDELLRKKALSELVLQSYRRAGLRETVEFLDRLKR
                     FGFDFATLGGVSIGLEDLEIPPVKTQLLEEAQKRVERFQRAYNTGQITFGERYNKVID
                     AWTHANNDVAEAMIDHMRASRGGFNPVYMMFDSGSRGSRDQIRQLAGMRGLMAKPQKK
                     LTGGIGEIIESPIKSNFREGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVA
                     QDVTITEEDCGTIKGLEMTALKEGEDVIETLKERITGSVAAEDVFDPHQLDDDGDPKL
                     LVQAGQLVEEETADAIEEAGIEKVNIRSVLTCEARRGVCRMCYGRNLATMEMVDMGEA
                     VGILAAQSIGEPGTQLTLRTFHIGGTSSRIAEEAERRARADGVVRYSDELDWTDLPVE
                     YEDGTKGNIRVVTSREDESASEETRQAIEVCDAKDASRVINRYPVPAGAILHVKEGDV
                     VTKGDNDRRATILYTWDPYSDPSIIKIDGDLRWKDLVPGVTLKEELDEGTGLRSLVVT
                     ADPDRELHPSVLVYAGKKDPQEYTLAEGSRIILGSPTDQISRAMDMPDQTNPWSSKFQ
                     VDERPVNEAWPGKSKKEAKDRTVYLSPPVRVAKGITITKMAKVAYKTRDITGGLPRVA
                     ELFEARRPKDPATISEVDGIVKFGEIKRGKREIFVNPTGGDGQLLEAETSQLYEVPAG
                     KHLRVHEGDRVRAGDRLTEGPVNPHDILRIKGPRAVQEYLLNEVQEVYRLQGVRIADK
                     HIGVIVRQMLQKLRVTDPGDTTFLEAESVDKLSFYDENERVTKRKSKPATAEPVLLGI
                     TKASLTTQSFISAASFQETTRVLTDAAIRGAKDDLRGLKENIIIGHLIPAGTGHYRYV
                     DLEIQPPAGFEPPPPLLEVVTDGTLPPVVAPEEVEAL"
BASE COUNT          670 a         1514 c         1377 g          833 t
ORIGIN      
        1 cgacgcggat gtcagcgtca gcggtggtta tctctacatc ctcaactcgg gcagcagctc
       61 catcagcgcc tttcgaatcg actcgaaagg agctttgacg ccgttgggtg aaaccacggg
      121 cttgccggcc ggggcaaacg gtctggtggc gcggtaagtc gggtatcgag aacatccgca
      181 acgaacgaaa agcgcccgag ctttcgcccg ggcgcctccg tccgcctgac cgcctgacca
      241 actgaccgac ttagagcgcc tccacctctt ccggcgcaac gaccggcgga agagtgccat
      301 cggtcaccac ctccagcagc ggcggcggcg gctcgaagcc cgccggcggc tggatctcca
      361 gatccacgta ccggtaatgg ccggtacccg ccggaatcag gtgcccgatg atgatgttct
      421 ccttgaggcc ccggagatcg tccttggcgc cgcggatcgc cgcatcggtc aacacccggg
      481 tcgtctcctg gaacgacgcc gccgaaatga acgactgcgt ggtgagactc gccttggtga
      541 tgccgagcag gaccggctcg gccgtggccg gcttgctctt ccgcttggtc acccgttcgt
      601 tctcgtcgta gaacgacagc ttgtccaccg actcggcttc gaggaaggtg gtatcgcccg
      661 gatcggtgac ccgcagcttc tgcagcatct ggcgtacgat cacgccgatg tgcttgtcgg
      721 cgatccggac gccctgcagc cggtagacct cctgcacctc gttgagcagg tattcctgca
      781 ccgcccgggg acccttgatc cgcaggatgt cgtgcggatt caccggcccc tcggtgaggc
      841 ggtcacccgc ccgcacccgg tcgccttcgt gcacccggag gtgcttgccg gccggcacct
      901 cgtacagctg cgaggtctcg gcttcgagca actgcccgtc accgccggtc ggattcacga
      961 agatctcgcg cttgccgcgc ttgatctcgc cgaacttcac aatcccgtcc acctcggaga
     1021 tcgtggccgg atccttgggc cggcgggcct cgaacagctc ggccacccgc ggcagaccac
     1081 cggtaatgtc gcgggtcttg tacgccacct tggccatctt ggtgatggtg atgcccttgg
     1141 ctacccgcac tgggggcgag agatacaccg tccggtcctt ggcctccttc ttcgacttgc
     1201 cgggccaggc ctcgttcacc ggccgctcgt cgacctggaa cttcgaggac cacggattgg
     1261 tctgatccgg catgtccatc gcgcggctga tctggtcggt gggcgatccc agaatgatgc
     1321 gtgatccctc ggccagggtg tactcctggg ggtccttctt gccggcgtag accaggaccg
     1381 aaggatgcag ctcccgatcc ggatcggccg tgacgaccag cgaccggagc ccggtgccct
     1441 catccagctc ttccttgagg gtcacgcccg gcaccaggtc cttccagcgc agatccccgt
     1501 cgatcttgat gatgctggga tcgctgtacg ggtcccaggt atagagaatg gttgcccgcc
     1561 ggtcgttgtc gcccttggtg acgacatcgc cttccttgac gtgcaggatg gcgccggccg
     1621 gcaccgggta gcggttgatc acgcgcgaag catccttggc gtcgcacact tcgatcgcct
     1681 gccgggtctc ctcgctcgcc gactcgtcct cgcggctggt gactacccgg atgttgccct
     1741 tggtcccgtc ctcgtactcc accggcaggt cggtccagtc cagctcgtca ctgtagcgca
     1801 ccacgccgtc ggcccgggcc cggcgctcgg cctcttccgc gatccgcgat gaagtcccgc
     1861 cgatgtggaa ggtccggaga gtcagctggg tgcccggctc accgatcgac tgcgccgcga
     1921 gaatgcccac cgcttcaccc atgtccacca tttccatggt ggccaggttg cggccatagc
     1981 acatgcggca gacgccgcga cgggcctcgc aggtgagcac cgagcggatg ttcaccttct
     2041 cgatgcccgc ctcttcgatg gcgtcggcgg tctcttcctc caccagctgg ccggcctgca
     2101 ccagcagctt gggatcgccg tcgtcatcca gctgatgcgg atcgaacaca tcttcggccg
     2161 cgacgctgcc ggtgatccgc tccttgagcg tctcgatgac gtcctcgcct tccttgaggg
     2221 cggtcatctc gaggcccttg atggtgccgc aatcttcctc ggtgatcgtg acgtcctggg
     2281 ccacgtccac cagtcgccgg gtgaggtagc cggcgtcggc ggtcttgagc gccgtgtcgg
     2341 ccaggccctt ccgcgcgccg tgggtggaga tgaagtactc cagcaccgac agcccctcac
     2401 ggaaattcga cttgatggga ctctcgatga tttccccgat accgccggtc agcttcttct
     2461 gcggcttggc catcaggccg cgcatcccgg ccagctgccg gatctggtcc cgactgccgc
     2521 gcgacccgga gtcgaacatc atgtagaccg gattgaagcc gccccgcgac gcgcgcatgt
     2581 ggtcgatcat cgcctcggcc acgtcgttgt tggcgtgggt ccaggcgtcg atcaccttgt
     2641 tgtagcgctc gccgaaggtg atctggccgg tgttgtaggc ccgctggaac cgctccaccc
     2701 gcttctgggc ttcctccagc agctgggtct tcaccggggg aatctccaga tcctccagcc
     2761 cgatcgacac gccacccagg gtggcaaagt cgaacccgaa ccgcttgagc cggtcgagga
     2821 actccaccgt ctccctgagc ccggcccggc gatagctctg cagtaccagc tccgagaggg
     2881 ccttcttgcg caacagctcg tcgcggaacc cgagctccgc gaccaccttc cgcggcagga
     2941 tgttgttgaa cagcacccgg cccacggtgg tgcgaatcca gcgggcccgg ggatcggccg
     3001 actcgcgggg cggcacgaac cagaaccgga tggcggtctg gtgggtcacc cggccgtgca
     3061 gcagcgccat ctccagctcg gccaggctgc cgaagaaggg ggcgggcttc cagagccgct
     3121 cccgggtctc ctcctgcttc accccgccct tgcggatctc ttcctcgaat ccggggggca
     3181 gcttggtgag gaagtagcag cccagcacca tgtcctgcga cggctcggcg atgggccgcc
     3241 cgtcggacgg cttcagaata ttgttggacg acaccatcaa cagccgggcc tcgagctgcg
     3301 cctcgaacga gagcgggacg tgcaccgcca tctggtcgcc gtcaaagtcg gcgttgaacg
     3361 cggcgcagac cagcggatgg atccggatgg ccttgccctc caccagcttg ggctcgaacg
     3421 cctggatgcc cagccggtgc agggtcgggg cgcggttgag cagcaccgga tgatcctgaa
     3481 tgatctcctc caggatctcg tacacctccg gcccctcgcg ctccacgatc ttcttggccc
     3541 gcttgaccgt ctcggcgatc cccttctcca ccagtttgtt gatgatgaag ggcttgaaca
     3601 gctcgaccgc catggttttg ggcagtccgc actggtgcag ccggagctcg gggcccacca
     3661 cgatcacgga gcggcccgag tagtccaccc gcttgccgag caggttctgg cggaaccggc
     3721 cctgcttgcc cttgagcatg tcgctgagcg acttgagggg ccgcttgccc cggccccgga
     3781 tggccttgga acgacgtccg ttgtcgaaca gcgcgtcgac cgcctcctgc agcattcgct
     3841 tctcgttccg gagaatgacc tccggcgcct tgtgctgaat cagcttctgg aggcggttgt
     3901 tccggttgat cacccggcgg tacaggtcgt tcaggtcgct ggtcgcgaac cggccgccgt
     3961 ccagcggcac cagcggacgc aggtcgggcg gcaggaccgg gatcacgtcc atcaccatcc
     4021 aggcgggatt gttcggcagc tcgccgttgt cgcccgagga aaggaacgcg tccacgatct
     4081 tgagacgctt gagcatctgc ttcttgcgat gctggctggt ctccttggcg atgccgtggc
     4141 gcagctcatc ggccagcttc ttcacgtcga tccgctcgag cagggtgcgg accgccggcg
     4201 cgcccagatc ggccttgaag cccacatcgc cttcctcccg ggccttggcg cggagggcga
     4261 ggtactcgtc ttcatcgatc aactgatggg gatcaacgtc cagcttgccc ggctcgatca
     4321 ccacctagct ggagtagtag atcacccgct ccaggtcgcg gagcgtcagg ttgaccaggt
     4381 tccccatcgg ggac
//
LOCUS       DASWKS010000254         4156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3095242, whole genome shotgun sequence.
ACCESSION   DASWKS010000254 DASWKS010000000
VERSION     DASWKS010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3095242"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VGA78_07440"
     CDS             <1..283
                     /locus_tag="VGA78_07440"
                     /inference="COORDINATES: protein motif:HMM:NF012688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEX9893742.1"
                     /translation="NGQCPVPIAEGFRTSPIPLHWALGIEHSPVYSSLPPLTSSIVRA
                     HDELVLEAPEEEVDVVQEVVRGHMEGAAELGVPLRVEMGIGENWLEAKG"
     gene            complement(440..2689)
                     /locus_tag="VGA78_07445"
     CDS             complement(440..2689)
                     /locus_tag="VGA78_07445"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX9893743.1"
                     /translation="MPLTALARGLVRWRWAVLGGWGLIAVVAALRAPQTVNLLDLRGG
                     SHRPTEARIADSLLRTRFPRAFSEYFVVTVQGPSGFSQGRPGATLDSLLAAARRPAWV
                     GTVLGWPDARDSLFLGPDRRSTFFLVAVTAPTSDSIAGLVAPFRHILETQLRRLPERD
                     DYTVRVTGRAPLEADIRELSARDSRRVELRVLPIALLILVLAFGALVAALLPILIGVL
                     AIAVSLALIGLLARVTPMSVFVLNLTTMIGLGVGIDYSLLMVTRFREELNHGLRPREA
                     AERTVVTAGNAVITSGLTVVVGLAALLLTPLVDTRSIGLGGIVVVAVAVLLSVTLLPA
                     LLATMGRDIDRPRWLARRLTWYHAPQIWEGWARALIRHPWRALMLGGTAIALLAWPLA
                     RLSVGLPARHWWPAATEAGAAVDQLTGMGRSGYLFPVRLVMEAPDTGLMTSAARLRGL
                     RTLADSLRTDPRVGDVRSLLDLSPGSGILTLSVLLSDLDSARVQYPALDGYLSPDARF
                     TLLDVIPADTVSLPTAMGLVESARALVTSGSVRQLRDSRILVGGYTAAAVDFQRDLLQ
                     RFPLLVVLVLAVTGVMLALAFRSVLVPLKAIVMNSLSVLATFGVIVLVFQQGFGSRLF
                     GLAEPTGAIYVAVPVLVFAVVFGLSMDYEVFLLSRIKEAFDRTGRNTEATTEGLGATA
                     TVITSAALIMITVFGAFAFAGVLVMQLLGFGLAVAVLLDATVVRMVLVPAFMHLAGRF
                     NWWPGRLKR"
     gene            2746..3636
                     /locus_tag="VGA78_07450"
     CDS             2746..3636
                     /locus_tag="VGA78_07450"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEX9893744.1"
                     /translation="MLEPSSNPRQQAKPYPPRRKRPELPPESPGPSGATRWLAGIITV
                     LVLMIVVARFNSSPETPAPAVDTQPVAPPPPPPRPLPPPQLPPPAPVAGATPTVDLMV
                     RLEAHRRIVRAGSMVYLDSLLIDSDSVLRRWPVRPREVVTVAVVQDSLSERAGTVGAA
                     ALREAFGRWSGLQLGGLQFGFISDTASANIVVQWIAEFEPVEKRTGQTDLTIASDGAI
                     HNGRIQLALADPSGKRMDRTALLTVALHEVGHVLGLGHSNQNTDVMYHTPRSPNLSER
                     DRRTAELIYGLPPGSVKGGN"
     gene            complement(3779..>4156)
                     /locus_tag="VGA78_07455"
     CDS             complement(3779..>4156)
                     /locus_tag="VGA78_07455"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9893745.1"
                     /translation="DNRSQDAVIEALGEAGGSENLQWLMAQARDGGTASSDRARAVRG
                     AVRAGARTEDLIQLYDAGQDRRVKEALLEALARIGDRAATDKLMAIARTETDLQIRRS
                     AINRLSKSGDERVAAMLKDLVER"
BASE COUNT          737 a         1423 c         1377 g          619 t
ORIGIN      
        1 gaatggccaa tgcccagtgc cgattgcaga aggatttcgg acctcaccca tacctctgca
       61 ttgggcattg ggcattgagc attctccagt ttattcctcc ctcccacctc tcacctcttc
      121 aatcgtccgg gcgcacgatg agctggtact ggaggccccg gaggaggaag tggatgtggt
      181 ccaggaggtg gtgcgaggtc atatggaagg agccgccgag ctgggcgtcc ctctccgggt
      241 cgagatgggg attggggaaa actggctcga agcaaaaggc tgaggttggg aggtgagagg
      301 ggggaataaa ctggagaatg gccaatgccc agtgccgatt gcagaaggat ttcggacctc
      361 acccatacct ctgcattggg cattgggcat tgagcattct ccagtttatt cctccctccc
      421 acatctcacc tctcacctct cacctcttca atcgtccggg ccaccagtta aaccgtcccg
      481 caaggtgcat gaaggctgga acgagcacca tccggaccac cgtcgcatcc agcagcaccg
      541 ccacggccag cccgaacccg agcagctgca tcaccagcac accggcgaag gcgaaggcgc
      601 cgaacactgt gatcatgatc agcgccgccg aggtgatcac cgtggccgtg gcgcccaggc
      661 cttcggtggt cgcctcggtg ttgcgaccgg tccggtcgaa cgcttccttg atccgcgaca
      721 gcaggaacac ctcgtagtcc atgctcaggc cgaacaccac cgcgaacacc aggaccggca
      781 ccgccacgta gatcgccccg gtgggctcgg ccaggccgaa gagccggctg ccgaagccct
      841 gctgaaacac cagcacgatg accccgaagg tggcgagcac cgagagcgag ttcatcacga
      901 tcgccttgag cggcaccagc acggaacgga aggccagcgc cagcatgacg cccgtgacgg
      961 ccagcaccag cactaccagc agcgggaagc gctgcagcag atcgcgctgg aagtcgaccg
     1021 cggcggcggt gtagccgccg accagaatcc ggctgtcgcg gagctggcgt accgagcccg
     1081 atgtgaccag ggctcgggcc gactcgacca ggcccatcgc ggtgggcagc gacacggtat
     1141 ccgccgggat cacgtccagc agcgtgaagc gcgcgtccgg gctcaggtat ccgtcgagcg
     1201 ccggatactg gacccgggcc gaatccagat cgctcagcag caccgacagc gtcaggatcc
     1261 cgctcccggg gctcagatcg agcaggctcc gcacgtcacc gactcgcggg tcggtccgta
     1321 gcgaatcggc cagcgtgcgc aagcccctga gtcgggcggc ggaggtcatg aggcccgtat
     1381 cgggcgcttc catcaccagc cgcaccggaa acagatatcc gctgcggccc atgccggtga
     1441 gctggtcgac cgccgcaccc gcctcggtgg cggcgggcca ccaatggcgc gcgggcagtc
     1501 cgacggacag ccgcgccagc ggccaggcca gcagggcgat ggcggtgccg cccagcatca
     1561 gggcccgcca gggatgccgg atcagagcgc gggcccaacc ctcccagatc tggggggcgt
     1621 ggtaccaggt gagccgtcgc gccagccagc ggggccgatc gatgtcgcga cccatcgtcg
     1681 ccagcagggc agggagcagc gtgaccgaga gcaggaccgc caccgccacc accacgattc
     1741 cgcccaggcc gatgctccgg gtgtcgacca ggggcgtcag cagcagcgct gccaggccca
     1801 ctacaacggt caggcccgag gtgatgaccg cgttgcccgc ggtgaccacg gtccgttcgg
     1861 cggcctcgcg cgggcgcaaa ccgtggttaa gctcttcccg gaatcgggtg accatgagca
     1921 gggagtagtc gatcccgacg cccaggccga tcatggtggt gagattgagc acgaataccg
     1981 acattggcgt cacccgtgcc agcaacccga tcagcgcgag cgacaccgcg atggcgagca
     2041 ccccgatgag aatcggcagc agcgccgcca ccagcgcccc gaaggcgagc accaggatga
     2101 ggagcgcgat cgggagaacc cggagctcga cccggcggct gtcgcgggcg ctcagctcgc
     2161 ggatgtcggc ctcgagcggc gcgcgcccgg tcacccggac ggtgtaatcg tcccgttcgg
     2221 gcaggcggcg cagttgggtt tcgaggatgt ggcggaacgg cgcgaccagg cccgcgatgc
     2281 tgtcggaggt gggcgccgtc accgcgacca ggaagaacgt cgaacgtcgg tccgggccca
     2341 ggaacagcga atcccgggca tcgggccagc ccagtaccgt gcccacccag gcgggccggc
     2401 gggccgcggc caggagggag tccagcgtgg ctccgggccg gccctggctg aagccgcttg
     2461 gcccctggac ggtaacgacg aaatattcac tgaaggcgcg ggggaaccgg gtgcgcagca
     2521 ggctgtccgc aatccgggct tcggtcggtc ggtgacttcc cccgcgaagg tccagcaggt
     2581 taaccgtttg cggcgctcgg agcgcggcca ccacggcgat gagaccccat ccgcccagga
     2641 ccgcccagcg ccagcgcacc aaaccgcgag ccagggcagt cagcggcaaa acggggccat
     2701 ccggtctccg gggtgcgagt ccatccgcca gtgttcaggg gcgaaatgtt agaacccagc
     2761 tcaaacccgc gccagcaggc gaagccctac ccgccgcggc ggaaacgtcc cgagctcccg
     2821 cccgagtcgc ccggcccgag tggcgccacc cgctggctcg ccggcatcat cacggttctg
     2881 gtgctcatga tcgtggtggc tcggttcaat tcgtcgcccg aaacgcctgc cccagcggtc
     2941 gatacccagc cggtcgctcc gccgccgcca ccgccgcgcc cgctgcctcc tcctcagctc
     3001 ccgcctcccg cgcccgtggc cggagcgacc ccgacggtgg atctgatggt ccggctcgag
     3061 gcccaccggc ggatcgtgcg cgccgggtcg atggtttatc tggattcgct gctgatcgac
     3121 agcgattcgg tcctgcggcg ctggccggtg cgcccccgcg aggtggtgac ggtcgcggtg
     3181 gtgcaggaca gcctgtccga gcgggccggc accgtcggcg cggcggccct acgcgaagcc
     3241 ttcggccggt ggagcgggtt gcagctgggc gggcttcaat tcggcttcat cagcgacacc
     3301 gcgtcggcca acatcgtggt gcagtggatc gccgagtttg agccggtcga gaagcgcacc
     3361 gggcagaccg atctgacgat cgcgagcgac ggtgccattc acaacgggag gattcagctg
     3421 gcgctggccg atccgtcggg caagcgcatg gatcgcacgg cgctgctcac cgtggcactg
     3481 cacgaagtgg gacacgtgct cggcctgggc cactctaacc agaacaccga tgttatgtac
     3541 cacacgcccc gctcgcccaa tctgagcgaa agggaccgtc gtactgcgga gctcatctat
     3601 gggctgccgc cgggctctgt caaaggtggg aactagaaag ggtcaagggt ggagtgaatg
     3661 cggaatgccc aatgacgagt gcccatagca gaggtatggg agtgggaaga atccctctgc
     3721 attgggcatt gggcattggg cactctccgg ttcactcccc cctgacacct cccccctctc
     3781 acctctcgac cagatctttc agcatggcag cgacccgttc atctccactc ttcgatagcc
     3841 gattgatggc actccggcgg atctgcaggt cggtctccgt tcgcgcgatg gccatcaact
     3901 tgtcggtcgc ggcccggtcg ccgatgcggg ccagggcttc cagcagcgct tccttcaccc
     3961 gccgatcctg acccgcgtcg tacagttgaa tgagatcctc ggttcgggct ccggcccgca
     4021 ccgccccacg gactgctcgg gcccgatcgg atgaggcggt gcccccgtca cgggcttgcg
     4081 ccatcagcca ctgcagattc tcgctcccgc cggcttctcc cagggcttcg atgaccgcgt
     4141 cctgcgatcg gttatc
//
LOCUS       DASWKS010000255         9817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3095673, whole genome shotgun sequence.
ACCESSION   DASWKS010000255 DASWKS010000000
VERSION     DASWKS010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9817
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3095673"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3541
                     /gene="nifJ"
                     /locus_tag="VGA78_07460"
     CDS             <1..3541
                     /gene="nifJ"
                     /locus_tag="VGA78_07460"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEX9893746.1"
                     /translation="VAHRLSEQIIIYPITPSSPMGELADEWTSHGRSNIWGQSPRVIE
                     MQSEGGAAGAVHGALQGGALTTTFTASQGLLLMIPNLYKIAGELTPFALHVAARTVAT
                     HALSIFGDHSDVMAVRQTGVALLASSSVQEAHDFALIAQAATLRSRIPLLHFFDGFRT
                     SHEIQKITLLDDEDLNALLDPALITAHRRRSLDPDHPVLRGTAQNPDVFFQAREAANL
                     FYQRCPGVVAETMEALGRRTGRRYGLFDYSGHPEAERVIVVMGSAGETVETMARRLID
                     DGERVGLVKVRLYRPFDGERFLAALPATTRTIAVLDRTKEPGAPGEPLFLDVVAALHE
                     GWAGRTHGAPVPWVIGGRYGLSSKEFTPAMAKAVFDELGAATPKRRFTIGITDDVTHL
                     SLPWDPGLSLEPEDEVRAVFWGLGSDGTVGATRNTIQILGEQTPLFVQGYFVYDSKKA
                     GAVTVSHLRFGPRPIRAPYLIREASFIACHQFDFLDRIDVLEAAAPGATVLLNAPFPP
                     ELVWDHLPREVQDTVIAKRLDLFAIDGYRVAREAGLAGRINTVMQTCFFALSGVLSPE
                     AAIARIKETIEKTYQKRGSVAIERNHAAVDRALDQLHRIEVPAVGSSKRNRSRIVPED
                     APDFVQRVTGVILAGQGDLLPVSAFPVDGTWPTATSRWEKRNLAAEIPVWDPAVCIQC
                     NWCALVCPHAAIRTKVYDPAALAGAPESFLHTTWKGPDFQGKAYTVQVAPEDCTGCSL
                     CTTICPAKDKANPRHKAIDLAPQRPLRERERSNYRFFLALPEADRRALTRMNVKTSQL
                     LQPLFEYSGACPGCGETPYLKLLTQLFGDRALVANATGCSSIFGGNLPTTPWAVNRDG
                     RGPAWANSLFEDNAEFGFGIRLALDARRAEAVRLVGELRDRLPEAVVTTLTLPRERSE
                     ETIAAEREAVAELKRRLQGSSEVPAQRLLEIADGLVHRSVWLAGGDGWAYDIGYGGLD
                     HVLAQERDVNVLVLDTEVYSNTGGQQSKATPLGASAKFASAGKGTPKKDLGLEAMSYG
                     HVYVAQVALGADMNQTVKAFLEAESYPGPSLIIAYSPCIAHGYDLRHGVEQQQLAAKS
                     GVWPLYRYDPRRVRQHLPPLQLDSKEPTVPVATYQRNETRFRMAEKVDPARHRELMAR
                     ASAQVRDRWAVYRYLAGLTMPQRGDGAPPEETP"
     gene            3538..4536
                     /locus_tag="VGA78_07465"
     CDS             3538..4536
                     /locus_tag="VGA78_07465"
                     /inference="COORDINATES: protein motif:HMM:NF005741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HEX9893747.1"
                     /translation="MNLATTYLGLKLPHPFMAGASPMVDDLDLVRRLEDAGSAAIVMH
                     SLYEEQLAREELATHRAMEPHAQAFAEAASYWPSPAAFALGPNEYLEQIRRIKVAVAV
                     PVIASLNGSTAGGWLRYAALMEDAGADALELNLYAIPTDLTRAGAAVEQSGIEIVQAV
                     VSQVRIPVAVKLSPWYSAFGHFARQIDAAGAGGIVLFNRFYQADIDPEQLEVRSRLKL
                     SHSGELLPRLTWLGILSGQIQASLAVTGGVHTATDAVKAVMAGADAVQLVSALLRHGP
                     ERLSLVREGFRQWLIEHEYEGIDQLRGSMNLRRCPDPAGFERAQYLHVLQSWRHAH"
     gene            4615..7281
                     /locus_tag="VGA78_07470"
     CDS             4615..7281
                     /locus_tag="VGA78_07470"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9893748.1"
                     /translation="MAAPTAFLDAGLAGRYRIERDVGAGGMATVYLAHDLRHNRKVAI
                     KVLRPELAAVLGPERFLKEIEVTANLQHPHILGLIESGTLDGQLYYVMPFMEGESLRQ
                     RLTREKQLSIEETLAITGAVAGALDYAHRRGVIHRDIKPENVLLHEGQPMVADFGIAL
                     AVSHAAGDRLTQTGLSLGTPYYMSPEQASGERQVDGRTDIYSLGCVAYEMLTGMPPFQ
                     GATAQAVLTAVMTTEPVPVSSRRPTVPAHVAAAIHTALEKVPADRFATAGEFVEALKR
                     PTERTIRRMEARGERRVKTRVGLMVGVAALLALLTGLAAGRLLFDRGGAGARVTRHWN
                     LVLSAQTPLALTGPGPLGIWQSAVALAPQGNILAYVTSRGSTTALAVRPLDRDSARVL
                     PGTEGAYHPFFSPDGTWIAFFSGTELRKVAAAGGSPTTLATVERPSGAVWPEADRILL
                     FQHDGFQMRWVAATGGGDSTVTLPTQFGTPSVLPGGEWALGQLSSGQLALMSLSDATQ
                     LAITRRGVVPLDSVKLADLLFGASPRYVSTGHLVFGSDDGVLTALPFDLESREVRGEP
                     VPVVSGVRIEEGFGFAEYALADDGTLVYVPGVSQLYGQIAYVGANGRFDTLPFPRGQY
                     TQPRISPDGTRMAAHIRKPIGGWEILVMDLETGVRHRVPVEGNYRAYPASWSPDGKTL
                     MIGLWAPVQNVAIGARLFSLEQGTSEEISLFRGSYMTIAPNGRDFVFSDWRTGEIFLR
                     ALRGDTSRTAIPGQGFAASFSPDGRWLAWGGVDGGVAVSPVPPTGATYPVAERGQQPL
                     WSPDGTKLIYRDGRRFYQVPITTTTGFRTGRATLLAEGPFIRTFAWNHTIGPDGRLAA
                     LISAPGESTRELGVITGFDRELARLAPPRPRP"
     gene            7301..7747
                     /locus_tag="VGA78_07475"
     CDS             7301..7747
                     /locus_tag="VGA78_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893749.1"
                     /translation="MASSAGSSDTSAEALRVQYRLYGAMTAAEKLKLVGELTLTASRF
                     ALAGLSLRFPEADQRELLLRLAALRLGEATVAQVYGWPATGRMQPHPPGDRSQAGSVH
                     SGGGRVRPGVAGAAAPDSAGPRIALARIEVRGLLHVTAATDSGCKL"
     gene            7834..8214
                     /locus_tag="VGA78_07480"
     CDS             7834..8214
                     /locus_tag="VGA78_07480"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893750.1"
                     /translation="MVPLIQVFDMPRSVAFYRDVLGFEVANQSRPGDAFDWGLLRRDG
                     IELMLNTAYEEEYRPLTPEPARIAAHEDTALFFGCPDVDAAYADLRAKAVDVRPPTVA
                     PYGMKQLYIKDPDGYVLCFQWPAA"
     gene            8320..8979
                     /locus_tag="VGA78_07485"
     CDS             8320..8979
                     /locus_tag="VGA78_07485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893751.1"
                     /translation="MGTAVVIGILPAEPLMAQEHAPPVLEIYRDSLTQGSGRAYRAVE
                     EDAARICADLNCPHPHLAIESLTGPKEVWWLNAFDSEAHRQQLVNAYAGNRALTMALE
                     GISKRKEGLVGKPVDLFVTYRPDLSGGATWKLRGTRFFVVTVTTQDRETRGSVFEAPD
                     GTRFVLRPAATSDVADALAAAAGPETTVFAVRPYWGMPARDWMAADPEFWSSNPMAKA
                     K"
     gene            complement(9025..9744)
                     /locus_tag="VGA78_07490"
     CDS             complement(9025..9744)
                     /locus_tag="VGA78_07490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893752.1"
                     /translation="MPRAGAVPGFVVAVVAIVVGAALAYWVGSKRERDKTAAVVEPAA
                     EWSILTSESAFLAERCRTESGFDPETSHWADYEVEPGLTVTIVPHMQSNKHSLAGLGR
                     GKVVAKFVNKNPDREYRPLALAANGQSCLFIQSTKRPDAEEDQLVARAIAAGAEMERT
                     FKSFHIDFHDSAHKTPLARWYDGTGRIVTAQAGAGALNAIFRLAAFPAVAQGDSTGGS
                     GPSAWVTCVSNGCCRMGMLDE"
BASE COUNT         1662 a         3274 c         3235 g         1646 t
ORIGIN      
        1 cgttgcacac aggctcagcg aacagatcat catctatccc ataacgccga gttcgcccat
       61 gggtgaactg gccgatgaat ggacatcgca cggacggtcg aacatctggg gtcagagtcc
      121 gcgcgtgatc gagatgcaat cggaaggcgg cgccgccggt gcggtgcacg gggcgctcca
      181 gggcggcgcc ctgaccacta ctttcaccgc ctcgcaaggg ctgctgctga tgatccccaa
      241 cctctacaag attgcgggcg aactgacccc attcgccctt cacgtggcgg ctcggaccgt
      301 ggcgacccac gccctttcga tcttcgggga tcactcggac gtcatggcgg tccggcagac
      361 cggcgtcgcg ctcctggcct cgagctcggt ccaggaggcg cacgactttg ccttgatcgc
      421 gcaggcagcc accctccgct cgcggatccc gttgctccac ttcttcgacg gattccggac
      481 ctcccacgag atccagaaga tcacgctgct cgatgatgag gacctgaatg ccctgcttga
      541 tccggcactg atcacggccc atcggcgccg gtcactcgat ccggaccatc cagtccttcg
      601 gggaacggcc cagaaccccg acgtgttctt ccaggcgcgc gaagcagcca acctgttcta
      661 ccaacgctgc cccggggtgg tggccgagac catggaggcg ctcgggcgcc gaaccggacg
      721 gcgctacggg ttgttcgact acagcggcca cccggaagcc gagcgcgtca tcgtcgtgat
      781 gggctcggcc ggggagaccg tggagacgat ggcgcggcga ctgatcgatg acggcgagag
      841 agtcggcctg gtcaaggtcc ggctatatcg cccgttcgac ggggagcgct tcctcgccgc
      901 cttgccggca accaccagaa cgatcgccgt cctcgaccgc actaaagaac ccggcgcccc
      961 gggtgagccg ctgttcctgg atgtcgtggc ggccctgcac gagggatggg ccgggcgcac
     1021 ccacggagct ccggtcccct gggtgatcgg ggggcgctat gggctctcgt ccaaggagtt
     1081 caccccggcg atggcgaagg cggtcttcga cgagctcggg gcggcgacgc cgaaacgccg
     1141 cttcaccatc ggtatcaccg acgacgtgac ccacctctcg ctaccctggg acccgggtct
     1201 ctcgttggag cccgaggacg aagttcgcgc cgtgttctgg ggcctgggaa gcgacggcac
     1261 cgtcggcgcg acccggaaca cgatccagat cctgggggag cagacgccgc tcttcgttca
     1321 aggctatttc gtgtacgact cgaaaaaggc cggcgcagtc accgtctccc atcttcgctt
     1381 cggcccccgg ccgatccggg cgccctacct gatccgggag gcgagcttca tcgcctgcca
     1441 tcagttcgac ttcctggatc ggatcgacgt gctcgaagcc gccgcgccgg gcgccaccgt
     1501 acttctcaac gcgccattcc cgcccgagct ggtctgggat cacctgccgc gagaggtgca
     1561 ggataccgtg atcgcgaaac gactcgacct cttcgcgatc gacggctacc gggtggcgcg
     1621 ggaggccggg ctcgcgggcc ggatcaacac cgtcatgcaa acctgcttct ttgccctctc
     1681 gggtgtgctg tcacctgaag ccgcgatcgc gcgcatcaag gagacgattg agaagaccta
     1741 tcagaagcgc gggtcggtcg cgatcgaacg gaaccacgcg gccgtggacc gggccctcga
     1801 ccagctccac cggatcgagg tgccggcggt tgggtcgtca aagcggaatc ggagccgcat
     1861 cgtaccggag gacgcgcccg acttcgttca gcgcgtgacc ggggtgatcc tggccgggca
     1921 gggtgatctc ctcccagtga gcgcctttcc cgtggacggc acctggccca ccgccacctc
     1981 gcggtgggag aagcggaacc tcgccgccga gatcccggtc tgggatccgg ccgtttgtat
     2041 tcagtgcaat tggtgcgcac tggtctgtcc ccatgccgcg atccggacca aggtatacga
     2101 cccggcggcg ctggctggag cacccgagag tttcctccac accacctgga agggaccgga
     2161 ttttcagggg aaggcctata ccgtgcaggt cgctcccgag gactgcaccg gttgctctct
     2221 ctgcaccacg atttgtccgg cgaaagacaa ggccaatccg cggcacaagg cgatcgacct
     2281 ggcaccgcag cggccgctgc gcgagcggga gcggagcaac taccgattct ttcttgcgct
     2341 ccccgaagcc gaccggcggg cactgacccg gatgaacgtc aagacatctc aattgctgca
     2401 gccgctgttc gagtactcgg gagcctgccc cgggtgtgga gagacgccct acctcaagct
     2461 cctgacccag cttttcggcg atcgcgcgct ggtggccaac gccaccggat gctcatcgat
     2521 cttcggcggt aacctgccga ccaccccctg ggcggtgaac cgggatgggc gcggtccagc
     2581 gtgggccaac tcattgttcg aagacaacgc cgagttcggc ttcgggatcc gactcgctct
     2641 cgacgcgcgg cgggcggaag cggtgcggct ggtcggggag ctgcgtgacc ggctgccgga
     2701 agcggtggtg accaccttga ccctcccccg ggagcggagc gaggagacca tcgccgcgga
     2761 acgggaggcg gtcgcggagc tcaaacgccg gctgcaggga agcagcgagg tcccagccca
     2821 gcgcctgctc gagatcgccg atgggttggt gcaccggtcg gtctggctgg ccggcggcga
     2881 cggctgggcc tacgacatcg gctacggcgg actcgaccac gtgctggcac aggagcgcga
     2941 cgtcaacgtc ctggtcctcg ataccgaggt ctattccaac accggcggcc agcaatccaa
     3001 agccacgccg ttaggcgctt ccgccaaatt cgccagcgcc ggcaagggca ctcctaagaa
     3061 ggatctcggc ctcgaggcga tgagctacgg ccacgtgtat gtggcccagg tggccctggg
     3121 cgccgacatg aaccagacgg tcaaggcgtt cctcgaggcg gagagctacc cgggaccatc
     3181 cctgatcatc gcctactcac cctgcatcgc ccacgggtac gatcttcggc atggcgtgga
     3241 gcaacagcag ctcgccgcca agtcgggcgt ctggccgttg tatcgatatg acccccgccg
     3301 ggtccgccag catctcccgc cgcttcagct cgattccaag gagccgaccg tgccggtggc
     3361 gacctatcag cggaacgaga cccggttccg gatggcggaa aaagtcgatc cggcccggca
     3421 tcgggagctg atggcccggg ccagcgccca ggtccgcgat cgatgggcgg tgtaccgcta
     3481 tctggccgga ttgacgatgc cccaacgcgg tgacggcgcg ccccccgagg agaccccgtg
     3541 aacctggcca cgacctacct cggcctgaag ctgccgcacc cattcatggc cggggcctcg
     3601 cccatggtcg acgatctcga cctggtccgg cggctcgagg acgccggctc ggccgcgatc
     3661 gtgatgcact cgctttacga ggagcagctg gcgcgggagg aactcgcaac ccatcgggcg
     3721 atggaacccc acgcccaggc gttcgccgag gcggcgagct attggcccag tccggcggct
     3781 ttcgcgctgg gcccgaacga gtatctggaa cagatccggc ggatcaaggt ggcggtggcc
     3841 gtccccgtca ttgcctcgct caacggcagc accgcgggcg gctggctccg ctacgccgca
     3901 ctcatggaag acgcgggcgc cgacgccctc gagctcaatc tctacgccat ccccaccgac
     3961 ctcacccggg cgggcgcagc cgttgaacag agcgggatcg agatcgtcca ggcggtggtg
     4021 agccaggttc ggatcccggt cgcggtgaag ctctccccct ggtactccgc gttcggccac
     4081 ttcgcccgtc agatcgatgc cgcgggagca ggcgggatcg tgctgttcaa tcgcttctac
     4141 caggccgaca tcgatcccga gcagctcgaa gtgcggtcgc ggctcaagct gagccattcc
     4201 ggcgagctgt tgccgcggct cacctggctc gggatcctct ccggtcagat ccaggcctcc
     4261 ctcgcggtga cgggcggggt gcacaccgcg accgacgcgg tcaaggccgt gatggccggc
     4321 gcggacgcgg tgcagctggt ctccgcgctg ctgcgccacg gacccgaacg gttgtcgctg
     4381 gtgcgagaag gatttcgcca gtggctcatc gagcatgaat acgaggggat cgatcagctc
     4441 cgtggcagca tgaatctccg ccgctgcccc gatcccgccg gattcgagcg ggcccagtac
     4501 ctccacgtgc tccagtcctg gcgtcacgcc cactgagaag agcgggctgg actcgccggc
     4561 gcgagccgcc agcttgtctg ggacgcaagc ggttgctaat gtcggcgtgt ccccatggcc
     4621 gctcccactg cctttctcga cgccgggctg gccggccgat accgtatcga gcgcgatgtt
     4681 ggcgcgggcg ggatggccac ggtctacctg gcgcacgatc tccgccacaa ccggaaggtg
     4741 gcgatcaagg tcttgcggcc cgagctggcg gccgtcctgg gccccgaacg gttcctcaag
     4801 gaaatcgagg tcaccgccaa cctgcagcat cctcacatcc tgggcttgat agaatcggga
     4861 accctggacg gccagctcta ttacgtcatg ccgttcatgg agggagagtc cctccgccag
     4921 cgattgaccc gtgaaaaaca gctctcgatc gaggaaaccc tcgccatcac cggcgcggtg
     4981 gccggcgccc tcgactacgc ccaccgacgg ggcgtgatcc atcgcgatat caaaccggaa
     5041 aacgtgctgc tgcacgaggg acagccgatg gtggccgatt tcgggatcgc gctggcggtg
     5101 agtcacgccg ccggcgatcg gctgactcag accggactct cgctgggaac gccttattac
     5161 atgagtccgg aacaggcctc cggcgagcgg caggtcgacg gccggaccga catctattcg
     5221 ctcggctgcg tggcgtatga aatgctgacc gggatgcctc ccttccaggg agccaccgcc
     5281 caggcggtgt tgaccgccgt catgaccacc gagccggtcc cggtcagcag ccggcgtccc
     5341 acggtaccgg ctcacgtcgc agcggcgatc catacggcac tggagaaagt gccggccgat
     5401 cgatttgcca ccgcaggcga attcgtcgaa gcgctcaaac ggcccaccga acgcaccatc
     5461 agacgcatgg aggcacgggg ggagcgtcgg gtgaaaaccc gggtggggct gatggtcggc
     5521 gttgcggccc tcctggcttt actcaccgga ctcgccgccg gtcgactgct gttcgatcga
     5581 ggcggggccg gcgcgcgggt cacccggcac tggaacctgg tgctttccgc ccagacgccg
     5641 ctggccttga ccgggccggg cccgttgggc atctggcagt ccgcggtcgc gctcgcacct
     5701 caaggcaaca ttctggccta cgtcacctcg cgaggaagca cgaccgcctt agcggtccgt
     5761 ccgctcgatc gcgactcggc gagagtcctg ccggggaccg agggcgccta tcacccgttc
     5821 ttctcgcccg atggaacctg gatagcgttt ttctccggga ccgagctgcg aaaggtcgcc
     5881 gccgcgggag gcagccccac cacgctggcc acggtggagc gtcccagcgg ggcggtctgg
     5941 cccgaggccg accgcatcct cctcttccag cacgatggat ttcagatgcg gtgggtggcc
     6001 gcgaccggtg gaggtgattc cacggtgacg cttccgaccc agttcggcac gccctccgtg
     6061 ctcccggggg gagaatgggc cctgggacaa ctgagctcgg gacagcttgc gctcatgtcg
     6121 ttgagcgacg cgacccagct ggccatcacc cgccggggtg tagtgccgct cgactcggtg
     6181 aagctggccg accttctgtt cggcgccagt ccccgttacg tgtcgaccgg ccatctggtg
     6241 ttcggcagcg atgatggcgt gctgacggca ctgccgtttg atctcgagtc gcgcgaagtt
     6301 cgcggtgagc cggtgccggt cgtatcggga gtccggatcg aagagggatt cggcttcgcc
     6361 gaatacgcgc tggccgacga cggtaccctg gtgtacgtgc cgggcgtgag ccagctctat
     6421 ggtcagattg cctacgtcgg cgccaacggg cgattcgaca ccctcccctt ccctcgagga
     6481 cagtacaccc aaccgcgaat ttcgcccgat ggtacccgca tggcggccca tatccggaag
     6541 ccgatcggcg gctgggagat cctggtgatg gatctggaga cgggagtgcg ccatcgggtc
     6601 ccggtggagg gcaactatcg cgcctatccc gcctcatggt cgcccgacgg gaagacgctg
     6661 atgatcggac tctgggcgcc ggtccagaac gtcgccatcg gcgcccggct cttttcgctg
     6721 gagcagggca cctcggaaga gatctcgctc ttccgagggt cgtacatgac catcgctccg
     6781 aatgggcgcg acttcgtatt ttcggactgg cgcaccgggg aaatcttcct acgcgccctt
     6841 cgaggcgaca ccagccgaac cgcgataccg ggccagggat tcgcggccag tttttcgccc
     6901 gacgggcgct ggctggcgtg gggtggagtg gatggaggcg tcgcggtgtc gcccgtgccc
     6961 ccgaccggcg cgacctaccc ggtagccgag cggggccagc aaccgctctg gtcgcccgat
     7021 ggaacgaagc tgatctatcg cgacggcagg cgattctacc aggtacccat cacgaccacc
     7081 accgggtttc ggaccggcag agccacgctc ctggcggagg ggccgttcat tcgaaccttt
     7141 gcctggaatc acaccatcgg cccggacggc cggctggcgg cgctgatctc ggctccgggc
     7201 gaaagcaccc gagagctggg tgtgatcacc gggtttgatc gggagctggc acgactggcg
     7261 ccgccgcgac ctcggccata ggctacctac atttgaaccc atggcatcga gcgcgggatc
     7321 cagcgatacc agcgccgagg cgctgcgggt ccagtatcgc ctgtatggcg ccatgaccgc
     7381 ggccgagaag ctgaagctgg tcggcgagct caccctcacg gcaagtcggt tcgcattggc
     7441 cggactgtcg ctgcggtttc ctgaggccga ccagcgtgaa ctgctgttgc gactcgcggc
     7501 actccggctg ggagaagcga ccgtggctca ggtctacggg tggccggcga ccggccggat
     7561 gcaacctcat ccacctggcg accgctctca agctggatct gttcatagcg gaggaggacg
     7621 cgttcgaccg ggagtggctg gtgcagcggc gccggattcg gctggcccac gcattgctct
     7681 cgcgcggatc gaagtccgtg gcctcttaca tgtgacggcc gcgactgatt caggctgcaa
     7741 gctttgaagg ttgggggctg tggagaaccc aggatcatcg atacttaggc ggctgtcact
     7801 tcgaggtccg acatgtctct caaggtagaa ggcatggtcc cgctgatcca agtcttcgac
     7861 atgcccaggt cggtcgcgtt ctatcgcgac gttctgggtt tcgaggttgc aaaccaatcg
     7921 cggccgggag acgccttcga ttggggcctg ctccgacgcg atggcatcga gttgatgctg
     7981 aacacagcgt acgaggagga gtatcgacca ctcacgccgg agcctgcgcg gatcgcggcg
     8041 cacgaggata ccgcactctt cttcgggtgc ccggatgtgg atgccgcgta tgcagatctg
     8101 cgggcgaaag ccgtcgatgt cagaccgccg accgtcgcac catacgggat gaagcagctc
     8161 tacatcaagg atccagacgg gtacgtcctc tgttttcagt ggccagcggc ctgacccgac
     8221 tgatatgccc ttcgtttgcg aggttcttga gcagaccgca gatcgcaggt gcctgcaatc
     8281 gacgcatgga acagccgccc ggttcgaggt cgtacccgaa tgggtaccgc cgttgttatc
     8341 ggcatcctcc cagcggagcc cctgatggcg caggaacatg cccccccagt tctggagatc
     8401 tatcgcgatt ccttgacgca agggagcggg cgcgcgtacc gcgcggtcga agaagacgcg
     8461 gccaggatct gtgccgacct gaactgcccg catccacacc tcgcgataga gtcgctcacg
     8521 ggacccaaag aggtgtggtg gctgaatgct ttcgactctg aggcccaccg ccagcaactg
     8581 gtgaacgcct atgccgggaa tcgggcgctg acgatggcac tggagggcat cagcaagcgc
     8641 aaagaggggc tggtcggcaa gccagtcgac ctcttcgtca cctaccgtcc cgacctgagc
     8701 ggcggtgcta cctggaagct caggggcacc cgctttttcg tggtcaccgt gaccacacag
     8761 gatcgcgaga cccggggctc ggtgttcgaa gctcccgacg gcacgcggtt cgtcctgagg
     8821 ccagcggcca cgtctgatgt ggccgacgcc ctggctgccg cagccggacc cgagacgacg
     8881 gtctttgccg tgcgtccgta ttggggcatg cccgcccggg attggatggc ggcagacccc
     8941 gagttctgga gctccaaccc gatggccaag gccaagtagg gaggcgccac cgcggggaag
     9001 cccttggtgt tctgagcggc aggattactc gtccagcatc cccatccggc agcagccgtt
     9061 gctgacacag gtcacccatg ccgacgggcc tgagcctccg gtagaatccc cttgggctac
     9121 ggcggggaaa gcagccagtc gaaagatcgc gttgagggcc ccggccccgg cctgggccgt
     9181 cacgatcctg ccggtcccgt cgtaccaccg cgccagcggc gtcttgtggg cactgtcgtg
     9241 gaaatcgata tggaacgact tgaaggtgcg ttccatttcg gccccggcgg caatagcgcg
     9301 cgccaccagt tgatcctcct cggcgtcggg acgcttggtg gactggatga acaggcacga
     9361 ctggccgttg gcggccagcg ccagcggccg atactcccgg tcggggttct tgttgacgaa
     9421 cttggccacc accttacctc ggcccagccc ggccagggag tgtttgttcg actgcatgtg
     9481 ggggacgatg gtgacggtga gcccgggctc cacctcgtaa tcggcccaat gggaggtctc
     9541 aggatcgaag ccggattccg tccggcagcg ctccgccagg aatgcggatt ccgaggtcag
     9601 gatcgaccac tccgctgccg gctcgacgac cgcagcggtc ttgtctcgct cccttttgga
     9661 cccgacccaa taagccagcg ctgctccaac gactatagcg accacagcga ccacgaaacc
     9721 cggaaccgcg ccagcgcgag gcattcgaaa cctcccgagc gagagaatga cgggccgctc
     9781 agaccggccc gccgagttgc cgcatccgcg ccagcac
//
LOCUS       DASWKS010000256         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_502406, whole genome shotgun sequence.
ACCESSION   DASWKS010000256 DASWKS010000000
VERSION     DASWKS010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502406"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VGA78_07495"
     CDS             <1..753
                     /locus_tag="VGA78_07495"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX9893753.1"
                     /translation="DLGRAYTFYRDRFADASDFTFVLVGAFTVDAIRPLVERWLGGLP
                     SLKRTEQWRDLGIMAPRGVVERTIHKGVEPKSRTQLVFSGPFEYTRANRAALRGLASV
                     LDIRLREVLREALGGTYGVSVSGTPTRLPRQEYSFSIGFGSAPERVDELVKAVFAEID
                     SIRKNGPADRDLAKVVETEVRSRETNLRQNGYWLSQLLFIEQTGEPAAPITDPRGDAV
                     LITRESIRGAAQRWLDPANHVRVTLLPEKSPS"
     gene            750..>2278
                     /locus_tag="VGA78_07500"
     CDS             750..>2278
                     /locus_tag="VGA78_07500"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893754.1"
                     /translation="MNRCLMALTVPLLASASLLPAQQSPPIDSVFAVWQRSDGPGCIA
                     GVRHNGSTVHLQAYGMANLEYGVPLGSESISESGSVAKQFTAAALLLLAQEGKLALDD
                     DIRKHIPEIPNFGSPITLRNLLTHTSGIRDQWALLSLAGWPPGTQVHSIDQIVHLMSR
                     QQRLNFPPGASYLYSNTGYTLLAAVVQRVTGQSLAQWSREHLFQPLGMRNTQWRDDFR
                     RVVPGRATAYSRGPGGLWALDMPFTKVYGNGGLLTTVPDLLLWNDALSTGTAPLSPEL
                     VRQMETPMRLNDGTEISYALGLGVSRWHGIREVTHGGATAGYRTYLARWPERGLSVAV
                     LCNAGPADPGGYARQIVRRVLGVTGDQPAPGPRVVIAPAELQAFAGAWRDSLTDRIIT
                     VVVKDSVLAASAGGPAVTFTHLGNARFWSLVAGDFRFARAGNGWNLTILDQGLHEYIR
                     QVAPDSASLRLADYVGRYHSDELDVDYQLETRAGRLTLRRAWEPASVLLPSYRDGFAT
                     SG"
BASE COUNT          358 a          758 c          779 g          383 t
ORIGIN      
        1 gacctgggcc gcgcctacac cttctatcgc gatcgcttcg ccgatgcgag cgacttcacc
       61 ttcgtgctgg tgggcgcgtt cactgtcgac gcgattcggc ctctggtgga gcgatggctg
      121 ggggggctgc cgtcgctgaa acgcaccgag cagtggcgcg acctcggcat catggcgccc
      181 cgcggggtgg tcgagcgaac gatccataag ggcgtggagc ccaagagcag gacccagctg
      241 gtcttctcgg gccctttcga gtacacccgt gccaaccgcg ccgccttgcg ggggctcgcg
      301 tcggtgctcg atatccggct ccgcgaggtg ctacgggaag cgctgggcgg gacctacggt
      361 gtgtcggtgt cgggcacacc cacccgtctc ccgcggcagg aatacagctt cagcatcggc
      421 ttcggatcgg ccccggaacg cgtcgacgag ctggtcaagg ccgtgttcgc ggagatcgac
      481 tcgatccgga agaacggccc ggccgatcgg gatctggcca aggtggtgga aaccgaggtg
      541 cgctcccgcg agaccaacct gcggcagaac ggatactggc tctcccagct gctgttcatc
      601 gagcagaccg gcgaacccgc cgcgccaatc acggaccccc ggggtgacgc ggtgctgatc
      661 acccgcgaat ccattcgagg cgcggcccag cgctggctcg atcccgccaa ccacgttcga
      721 gtgaccctgc tgccggagaa gagtccttca tgaatcgttg tctgatggcg ctgacggtcc
      781 cgctcctggc atccgcttcc ctactccccg cccaacagtc gccgccgatc gactcggtgt
      841 tcgccgtctg gcaacggtcc gacgggccgg gctgcattgc cggagtgcgg cacaacggga
      901 gcaccgtcca tttgcaggcg tacgggatgg cgaatctcga atacggcgtc ccgctcggtt
      961 cggagtcgat ttcggaatcg ggctcggtgg ccaagcaatt caccgccgcg gccctgctgc
     1021 tcctggctca ggagggcaag ctcgcgctcg atgatgacat tcggaagcat atcccggaaa
     1081 ttccgaattt cggctccccc atcacgctcc gaaacctgct gacccacacc agcggcatcc
     1141 gggatcagtg ggccctgctg tccctggccg gctggccgcc cggcacccag gtgcacagca
     1201 tcgaccagat cgtgcacctg atgagccggc agcagaggct caatttcccg ccgggcgcgt
     1261 cgtacctcta cagtaacacg ggatacactt tgctcgccgc ggtggtgcaa cgggtgaccg
     1321 gtcagtcgct ggcccagtgg agtcgcgagc atctgtttca gccgctcggc atgcgcaaca
     1381 cccagtggcg ggacgatttc cggcgcgtgg ttccgggacg ggcgacggcg tacagtcgcg
     1441 ggccgggagg gctctgggcg ctggacatgc ccttcaccaa ggtgtacggc aacggcggat
     1501 tgttgaccac cgttcccgat ctgctgctct ggaacgacgc gctctccacc gggacagcac
     1561 cgctgagccc cgagctggtc cggcagatgg aaaccccgat gcggctcaat gacgggaccg
     1621 agatctccta cgcgctgggc ctgggcgtga gccgctggca cggcatccgg gaggtcaccc
     1681 acgggggcgc caccgcggga taccgcacct acctggctcg ttggcccgaa cgcgggctct
     1741 cggttgcggt gctttgcaat gccggccccg ccgatccggg agggtacgcc cgccagatcg
     1801 tccggcgggt gctgggtgtg accggcgatc agccggcgcc ggggccccgg gtggtgatcg
     1861 cgcccgccga gctccaggca ttcgcgggcg cctggcgaga ttccctgacg gaccggatca
     1921 tcaccgtcgt cgtcaaggac agcgtattgg cggcgtctgc cggagggccg gcggtgacgt
     1981 tcacccacct ggggaacgct cgattctgga gtctggtggc cggtgacttc aggttcgcgc
     2041 gggcgggtaa cgggtggaac ctgacgattc tcgaccaggg cctgcacgag tacatccggc
     2101 aggtggcgcc agacagcgcg tcgttgcgtc ttgccgatta tgtcggtcgc tatcacagcg
     2161 atgagctgga cgtggactac cagctggaaa ccagagccgg gcggctcacg ctccggcggg
     2221 cgtgggagcc cgcgtcggtg ctgctgccga gctaccggga cggcttcgcg accagcgg
//
LOCUS       DASWKS010000257         5632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2362941, whole genome shotgun sequence.
ACCESSION   DASWKS010000257 DASWKS010000000
VERSION     DASWKS010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5632
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2362941"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VGA78_07505"
     CDS             complement(<1..1168)
                     /locus_tag="VGA78_07505"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893755.1"
                     /translation="MRSILFVDPPSFCTTIEGLVAPALRSRPLAVAPPGAERATVLAL
                     SPEAETAGVRRGMAARLAKKLCPDLILLPPNPQLYARASRALHEVLRAYAPVIEPRWY
                     GHSFLDLTGTERLFGPAVDVAARIRREVEERLRLPLWVGVATNKLVSEAATRVGRADG
                     RTGGRTDSLWPLAVPSGDEASFLAPRHIEVLPDVPDRIRLRLDDYQLDLIGAIAAIAE
                     TDLCAVFGGAGRVLRAQARGIDPRPVLAPEVRAEYRAAHTLATDTNDLGLLHQLLRRL
                     TERLGRRLRQRTLAARRLTVAIDYVDYASAARGIPLAPAALDVELWDASRRALAQAMT
                     RRLAIRRVTVTVDRLIDANLQLDLWEAPSPRLVLLQQAVDRLQQTGSRDQGPGTR"
     gene            complement(1249..2403)
                     /locus_tag="VGA78_07510"
     CDS             complement(1249..2403)
                     /locus_tag="VGA78_07510"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9893756.1"
                     /translation="MRRTPGARFGLHYLQLLRMGTMQLTKARRAGGQAGGKLAVQLPL
                     LPASPPARLPVLDQRRRGTDFISLPIRSVLNPPERTGMSFWSINPYVGCEFGCSYCYA
                     RDTHRWVTERSVRGSQQSDSRSVGQSVKLESGPTDRPTARPTDRLTGGPTDMSDLFEH
                     RIYVKEEVAAVLARTLDPSKVGQTPIVIGTATDPYQPAERRFLLTRRLLETFRGFRDL
                     TISITTKSSLVARDVDLLVELARKHDVSVNLSLATVDPVLLRQLEPRTPLPHARLRAL
                     KTLTTAGIEAGVLIAPILPGITDSWSSLAQVMEAAKEAGARFVVGMALRLGTAARARF
                     LPLLHREFPNLAPRYEQHYGRRYNTRREYQKALERRLRLLREAYGFNRSE"
     gene            3059..3538
                     /locus_tag="VGA78_07515"
     CDS             3059..3538
                     /locus_tag="VGA78_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893757.1"
                     /translation="MPRVLFDPWTSGLVILEEAGSPGAVRFRRLASDGKVVGRRMLRL
                     PVADLTEAVVVKQIELYRSRNTSIPASQYRKALYRPKYLPAIRSARVTAGGQLWVLTN
                     AERQDGRVWMVFDRDGQHRLTVTAPATISILETTGDTVYAADLDPDGIASLVRFRLR"
     gene            complement(3622..>5632)
                     /locus_tag="VGA78_07520"
     CDS             complement(3622..>5632)
                     /locus_tag="VGA78_07520"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HEX9893758.1"
                     /translation="CRENQSDSVGPQFAKVKPNRDLTLTGAGNGHGVVTAPTYGESGS
                     LECSISGGTYNPIDCTKTYGWKTSVELTATPSAGSQFTGWSGACNGTASTCKVVMTQA
                     RSVRATFSGAGTPSFTLNVVGGGDGSGTITSQAGLSPAISCTVTAGSVVGTGCSAVYL
                     QGIAVTLTATAASGNSFSGWSGDCSGTGTCSLVLSANRSATGGFAAPLGIEATMGKWA
                     ASQLTPVVAVHLSQLPNGKALLWGHGGEPQLWHGPGAGFTEVPNSNCTNAGGCDLFCS
                     GHAFLANGRLLVAGGHNEVLGDNNGVTQASIFDGTSWQATGSMAAGRWYPTLVTLENG
                     DVLAISGNKEPGVNANIVERYNAATGSWSPLSGTGAITVSLYSRAFVEPKNGWVFVAG
                     EGTSRYLNPTGSGSWSTAPGRVVADRGYGNAVMLDSKVLYIGGGGASGCPSNLPKNSA
                     EIIDLAAATPAWSLLTATMQIGRRQAVATILADGKVLVTGGTSQCGFSTETGAIFAAE
                     MWDPATGQWTQQANAGVVRVYHSTAVLLPDGRVLSTGSGEGANVSHQKNYEVFSPPYL
                     FKGARPTYNLARTDMHYGQPFTVVTPNAAQIRKVHLIRLAASTHAFDMGQRLNTVAFQ
                     AAADGQSLTLTPPASGRIAPPGPYFLFILNDKGVPSVAQTILLSP"
BASE COUNT          950 a         1796 c         1881 g         1005 t
ORIGIN      
        1 ccctggtccc tggtccctgg tccctgcttc ctgtttgttg tagtcgatcc actgcctgct
       61 gcaacaacac cagtcgtggg ctgggtgcct cccaaagatc caactgaaga ttggcgtcga
      121 tcagacgatc cacggtcacc gtcacccggc gaatcgccag ccgccgggtc atcgcctggg
      181 ccagagcccg ccgagatgca tcccataact cgacgtcgag cgcggcgggc gccagcggaa
      241 ttccgcgggc ggcactggcg tagtccacgt agtcgatcgc caccgtgagc cgtcgcgccg
      301 ccagggttcg ctgccggagc cgccggccca gccgctcggt gagccgtcgg agcagctggt
      361 ggagcaggcc caggtcattg gtgtcggtgg cgagagtgtg cgcggcccga tactcggcgc
      421 gcacctcggg agccagcacc ggccggggat cgatgcctcg cgcctgggcc cggagtacac
      481 ggccggcgcc gccgaacacg gcgcagaggt cggtctcggc gatcgccgcg atggctccga
      541 tcaggtcgag ctgatagtcg tcgagccgca ggcggatccg gtcgggcacg tcgggcagca
      601 cctcgatgtg acgcggggcg aggaagctcg cctcatcacc ggacggcacg gcgagcggcc
      661 acagggagtc cgtccgtccg ccggtgcgcc cgtccgcccg tcccacccgg gtcgccgctt
      721 cactcaccag cttgttggtg gcgacgccga cccagagcgg cagccggagc cgctcctcga
      781 cttcgcgccg gatccgcgcc gccacatcca ccgccggtcc gaacagccgc tcggtaccgg
      841 tcagatcaag aaaggaatgg ccgtaccagc gcggctcgat gaccggcgca tacgcccgca
      901 ggacttcatg cagcgctcgc gatgcccgcg cgtagagttg cggattaggc ggcagcagga
      961 tgagatcggg gcagagcttc ttcgccagcc gcgcggccat gccccggcgt actccggctg
     1021 tctcggcctc gggggaaagc gccagcaccg tcgcgcgctc cgcgccgggt ggagcaaccg
     1081 cgagaggacg ggagcggagc gccggggcga ccaggccttc tatggtggtg caaaaggaag
     1141 gggggtcgac gaagaggatg gagcgcatac agggtcggaa gggtcgggag ggtcgtaggg
     1201 gtcgggaatt tccgggccgg ctgcttccga cctttccgac ccttccgact attccgacct
     1261 attgaagccg taggcttccc gcagcaaccg cagccgccgt tccagcgcct tctggtactc
     1321 ccggcgggtg ttgtaccgcc ggccgtagtg ttgctcgtaa cgcggtgcca ggttggggaa
     1381 ctcgcggtgc agcagcggca ggaagcgggc acgggccgcg gtgccgaggc ggagcgccat
     1441 cccgaccacg aagcgcgctc ccgcttcctt tgctgcttcc atgacctgcg cgagactgct
     1501 ccagctgtcg gtgatgccgg gcaggatggg cgcgatcagc accccggcct cgatcccggc
     1561 ggtggtgagg gtcttgagtg cgcggagccg cgcgtgaggc agcggggttc ggggctcgag
     1621 ctgccgcagc agcacgggat ccacggtggc gagcgagaga ttcacgctca cgtcgtgctt
     1681 ccgagccagc tcgaccagca ggtcgacatc ccgcgccacc agcgacgact tggtagtgat
     1741 ggaaatggtc agatctcgaa agccgcgaaa cgtttccagc agacgtcggg tgagcaggaa
     1801 acgccgctcg gccggctgat agggatcggt ggcggtgccg atcacgatcg gggtctggcc
     1861 caccttcgac ggatccaggg tccgagccag taccgcggcc acctcttcct tgacgtagat
     1921 gcgatgctcg aaaaggtcgg acatgtccgt cggaccgccg gtcagtcggt cggtcggtcg
     1981 ggcagtcggt cggtcggtcg gtccggattc aagtttgacc gactgaccga cggaccgact
     2041 gtccgactgt tgcgacccac ggaccgaccg ttccgttacc catcgatgag tatccctcgc
     2101 atagcagtaa ctgcagccga actcacaccc gacgtaggga ttgatcgacc agaacgacat
     2161 gccggtgcgc tcgggtggat tgagcaccga gcggatgggc aggctgatga aatcggtgcc
     2221 gcgtcggcgc tggtccaaga cgggcaggcg ggcaggcgga ctggcgggca gtaaaggcaa
     2281 ttgcaccgcg agttttccgc ccgcctgccc gcctgcccgc ctggcctttg tcagctgcat
     2341 cgtccccatc cgcagtagct gcaggtaatg cagcccgaag cgtgcaccag gggtccggcg
     2401 cattcggggc aaaccagtgg gcgggcaggc gggcggacag gctggctgac gggcgggtgg
     2461 gctgtaatgg gtggcatctg ttcctacttc ggcttccgtt cgggtaatat taccgaataa
     2521 ataccgaagt caaggcggga gagcaaactc ccgaacctgt catgctatat cattactggg
     2581 tcatgacttg gatgtttttg agccgacctg gttttgccat gatcctcgaa ttggctgtgt
     2641 tgctgagtac cgtcgggcgg caagacgtgc cccagggtcg tctgatcgaa gaccgccgct
     2701 ggggtggaac cgacgaggac accgttttcg catcccatat cttcggattc gcgttgaagg
     2761 gggcgaaggc agtcataacg atgccgatga tcggaagggt tctccggatc gacctaacca
     2821 gtgggagcat cacgccggtg ggtcggcccg gcaaaggaag ctcggatact atctgccgtt
     2881 gcccggcggc gcttggctct accaggagat cacgcggcgc gacaccataa cagtctatcg
     2941 actctcgcgc gaccaacgat cccgcaccga agtattcacc atcggatgga aagcgcttcc
     3001 tcaactatca attgccacac gctccgggga gatcgtcggt ccccagccat tcgaaccagt
     3061 gccccgagtt ctgttcgatc cctggaccag cggtcttgtg attctggagg aagccggcag
     3121 cccgggcgca gttcgctttc gacgcctggc gtccgacggc aaggtggtcg gccggcgaat
     3181 gctgcggctg ccggtggcgg acctcaccga ggcggtcgtg gtcaagcaga tcgagttgta
     3241 tcgctcccgc aatacctcga tcccggcttc gcaatatcgc aaggcgctct accgtcccaa
     3301 ataccttccg gcgattcgct cggcgcgcgt gaccgcgggc ggccaacttt gggtgctcac
     3361 gaacgccgag cggcaggatg gccgggtctg gatggtgttc gaccgtgacg ggcagcatcg
     3421 gctgacggtc actgctccgg cgacgatctc gatcctggaa accaccggcg acacggtgta
     3481 cgccgcggat ctggaccccg atggcattgc ttctctggtg cggttccgcc tgcggtagtc
     3541 atcctgagca aagcgaaggg ctgcttcgag ggagattcgt cgctgcgctc agaatgacgg
     3601 tgccggcatg ctgtcgtcga ttcaaggaga taacagaatt gtctgagcga ccgaaggcac
     3661 gcccttgtcg ttgaggatga acaggaaata cgggcccggc ggagcgatcc ggccggacgc
     3721 tggtggagtg agggtcaggc tctggccgtc ggcagctgcc tggaacgcga cggtattcag
     3781 ccgttgtccc atgtcgaagg catgggtcga cgccgccagc cggatcaaat ggaccttccg
     3841 gatctgcgcc gcgttgggcg tcacgacggt aaacggctgg ccatagtgca tgtcggttcg
     3901 agccaggttg taggtcggac gggctccctt gaacaggtag ggcggagaaa agacctcgta
     3961 gtttttttgg tggctcacgt tggccccttc gccgcttcca gtcgagagca cccgcccgtc
     4021 cggcagaagc acggcagtgg agtgatagac ccgtactacg ccggcgttgg cctgctgggt
     4081 ccattgtcct gttgccggat cccacatttc ggctgcgaag atcgcgccgg tctcagtgct
     4141 gaacccgcac tggctggtcc ccccggtgac cagcaccttt ccatccgcca ggatcgttgc
     4201 caccgcctgg cgccggccga tctgcatcgt ggcggtcagc agcgaccatg caggggtggc
     4261 tgctgccaga tcgataatct cggcgctgtt cttgggaaga ttggaggggc agcccgaggc
     4321 acctccgcca ccaatgtaga ggaccttgct gtccagcatg accgcgttcc cgtaaccccg
     4381 gtccgctacc acgcggccgg gcgcggtgct ccacgatcca ctcccggtgg ggttcaagta
     4441 ccgtgaagtg ccttcacccg ccacaaacac ccagccgttc ttcggctcga caaacgcgcg
     4501 ggagtagagc gagacggtga tcgcaccggt tccactgaga ggactccacg acccggtcgc
     4561 ggcgttgtaa cgctccacga tgttggcgtt gaccccgggt tccttgttgc cggatatcgc
     4621 caatacgtcg ccgttctcga gggtaaccag ggtagggtac caccgcccgg ccgccatgga
     4681 gcctgttgcc tgccaggagg tgccatcgaa gatgctggcc tgcgttacac cgttgttgtc
     4741 tcccaggact tcgttgtgtc cacccgccac caggagtcgc ccgttggcga gaaaggcatg
     4801 cccgctgcag aaaagatcgc agccgccggc gttggtgcag ttgctgttcg gtacctcggt
     4861 gaagccggcg cccggtccat gccagagctg tggttctccg ccgtgacccc acagcagcgc
     4921 cttcccgttc ggcagctggc tgagatggac tgcgactacc ggagtcaact gggaggccgc
     4981 ccacttcccc atggtggctt cgattccgag cggggcggcg aagccgccgg tcgccgagcg
     5041 gttggccgag agaaccagac tgcaggttcc agtgccgctg cagtccccgc tccatccgct
     5101 gaagctgttg ccgctggcgg cagtggcggt cagcgtgacg gcgattccct ggaggtacac
     5161 cgcggagcag ccggtgccga cgacactccc cgcggtgacg gtgcagctga tcgccggtga
     5221 gaggcccgcc tgactggtga tcgtgccgct tccgtctccg ccaccgacca cgttcaaggt
     5281 gaacgagggt gtccccgctc cgctgaaggt ggcccgcacg ctccgagcct gggtcatgac
     5341 caccttgcag gtgcttgcgg tgccgttgca cgccccgctc catccggtga actggctccc
     5401 agcggaagga gtagcggtca gctcgaccga agtcttccac ccgtacgtct tggtgcagtc
     5461 tatgggattg taggtaccgc cgctgatact gcactcgagt gatccggact caccgtaggt
     5521 tggagcggtc accacgccgt gaccattccc cgctcccgtc aatgtcaggt cacggttcgg
     5581 cttcaccttg gcgaactggg gaccgacgct gtcggattgg ttctcccgac ag
//
LOCUS       DASWKS010000258         2156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_120268, whole genome shotgun sequence.
ACCESSION   DASWKS010000258 DASWKS010000000
VERSION     DASWKS010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120268"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..540
                     /locus_tag="VGA78_07525"
     CDS             88..540
                     /locus_tag="VGA78_07525"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9893759.1"
                     /translation="MPDTYLRWLNSLAFAAIAILTPVGALSAAAPSDSSEVAAIVERY
                     HAALALLADDVVILESGGRESRDDYRAHHLAADIAFARAVLSQRGPMTVRVRGDVAWV
                     TGTSTTQGEYRGRPVNSTGAELMVLSREAGGWRIRAIHWSSRSRRPGG"
     gene            complement(573..>2156)
                     /locus_tag="VGA78_07530"
     CDS             complement(573..>2156)
                     /locus_tag="VGA78_07530"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9893760.1"
                     /translation="FFLFGAVGIVLLGACTSVANLLLIKAAASRKQMAVQHALGASRF
                     QLGAQVVTESLLLSGLGAAAGLLLAWGGVRAFIAIGPREIPLLADARIDGMVLAFTMA
                     TASVTAILAGILPAWRASRRDVTPILRQGGGRSPGSADRRLMNSLAVSQIALALLLLA
                     AGILLTRSFRALLSVDPGFDPGRVLSFKLELPMATTYPTQEERDAFFATLLEQVEGLP
                     GVGAATLTSAPPIEEESSLMNFTTPGRADDRVRQANFRIVAPDYFSLLGIPIVQGRAF
                     TPSDNRSGPRVAIISETLARSIWGSESSLGATIQTPFAATAEVVGVAADVRTNGLDGQ
                     PGRTVYGAASQATYNFMTVLVKGRHDPRGIAPAIRAAVRTLDPDLPLYHVRTVGELMT
                     QSVAQQRFLMLLVGSFSVLVFALAVVGTYGVVSYGVSERTGELGIRAALGATGADIKR
                     LVLREGARLALAGILIGTVAAIALTRTLTRFIFQISALDPVTFILAPLLLGSAALIAV
                     LVPAHRATRVDPMHALRVD"
BASE COUNT          395 a          709 c          738 g          314 t
ORIGIN      
        1 ttaaagtttc gtgaacctcg ccgggagtga tggaaatcgt gacgggagcc attacgatca
       61 agggaaagac aatcccggag agtctctatg cccgacactt atctgcgctg gctgaactcg
      121 ctcgccttcg cagcaatcgc aatccttacg ccggtggggg cactctcggc ggccgccccg
      181 agtgactcga gcgaagtggc cgcaattgtc gagcgctacc atgccgccct cgccctgctg
      241 gccgatgacg tcgtgatcct tgagagcggc gggcgggaat cgcgggatga ttaccgggcc
      301 caccatctcg cggcggatat cgcattcgcc agggcggtgc tcagccagcg cgggccaatg
      361 acggttcggg tacggggcga tgtggcctgg gtcactggga ccagcacgac ccagggggaa
      421 tatcggggcc gaccggtcaa ttccaccggg gccgagctga tggtgctctc gcgcgaggcc
      481 ggcgggtgga gaatccgcgc gattcactgg tcttcgcggt ccagacggcc gggcggctga
      541 tcccggggcg gatcaacgct cctccagccg cctcagtcca cccggagagc gtgcatcggg
      601 tcgacccggg tggcccgatg cgccggcacc agcaccgcga tcagcgcggc agatccgagc
      661 agcagcgggg ccaggatgaa cgtcaccggg tccagggcac tgatctgaaa gatgaatcgg
      721 gtaagggtcc gggtcagggc gatggcggcg acggttccaa tgagaatccc ggccaacgcc
      781 aggcgggctc cttcccggag taccaggcgc ttgatgtcgg ccccggtcgc acccagcgcg
      841 gcccggatgc ccagttcccc ggtgcgttcg ctcaccccgt acgacaccac gccataggtc
      901 ccgacgaccg cgagggcgaa caccaacacc gagaagctgc cgaccaggag catgaggaac
      961 cgctgctgag ccacggactg ggtcatcagc tcacccacgg tgcgaacgtg atagagcggc
     1021 aggtccggat ccagggtacg caccgctgct cggatggctg gagcgatccc acgggggtca
     1081 tggcggccct tgaccaggac ggtcatgaag ttgtaggtcg cctgggacgc ggcaccatac
     1141 accgtccgcc ccggttggcc gtcgagcccg ttggtccgca cgtcggccgc gacaccgacg
     1201 acctccgcag tggccgcaaa cggagtctga atcgtggcgc cgagggagct ctcgctcccc
     1261 cagatggatc gggccagggt ctcgctgatg atcgcgaccc ggggtccgga gcggttatcg
     1321 gaaggagtga aggcgcgccc ctgaacgatg ggaatcccca ggagagagaa gtagtccggc
     1381 gccacgattc ggaaattcgc ctgccgcacc cggtcatccg ctctgcccgg cgtggtgaaa
     1441 ttcatcaggg acgattcttc ctcgattggc ggggcgctgg tgagcgtggc ggctcccacg
     1501 cccggcaggc cctccacctg ctccaggagg gtcgcgaaga aggcatcgcg ctcctcctga
     1561 gtggggtagg tcgtcgccat gggaagctcc agcttgaagc tgagcactcg ccccggatcg
     1621 aaacccgggt cgacgctcag cagggcccgg aagctgcgag tcagcaggat gcccgcggcg
     1681 agcaggagca gcgccaacgc gatttgtgat actgccagag agttcatgag ccggcggtcg
     1741 gcgcttcccg gtgagcggcc gccgccttga cgcagaatcg gcgtcacgtc gcgccgcgag
     1801 gcccgccagg cggggaggat ccccgccagg atcgccgtta cactggccgt ggccatggta
     1861 aaggcgagca ccatgccgtc gattcgggca tccgccagca aggggatctc ccggggcccg
     1921 atggcgatga acgcccgcac acccccccac gcgagaagca gccccgcggc cgcccccagg
     1981 ccgctgagga gcaggctctc ggtcacgacc tgagcgccca actggaagcg ggaggcgcct
     2041 aacgcatgct ggaccgccat ctgcttccgg ctggcggcgg ccttgatgag gagcagattc
     2101 gcgacgctgg tacaggcacc caacaacaca attcccacgg cgccgaacag gaaaaa
//
LOCUS       DASWKS010000259         9519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_503614, whole genome shotgun sequence.
ACCESSION   DASWKS010000259 DASWKS010000000
VERSION     DASWKS010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9519
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503614"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..1333)
                     /locus_tag="VGA78_07535"
     CDS             complement(137..1333)
                     /locus_tag="VGA78_07535"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX9893761.1"
                     /translation="MRPILAPLMLCMVLPLGAQTRARGRDLGVPFPGTPGPLNAITDV
                     AGVEVGHTTIIRGEGKLVRGQGPVRTGVTAILPRGKNSDDNVMAAWFTLNGNGEMTGT
                     TWVEESGFLGGPVMITNTHSVGIVHDAVIEWIVKRGKEFDWSLPVVAETWDGTLNDIN
                     GFHVTKEHAFAALEGASGGAVAEGNVGGGTGMMCHGFKGGIGTSSRKVSPGGWTVGVL
                     VQCNYGGRRQLRIAGTPWSSVPEAGQPLPCYTIDPPPNARFGRCGGPPPREEPEELGS
                     IIIVVATDAPLLPHQLKRLVKRASLGIGRMGGIGGNSSGDIFVAFTTANPRSDVESGT
                     ATLQMLANNAVSGLFEATIDATEEAILNAMLAATDLTGADGLRVPALPHAMVVELLRK
                     HSRLSR"
     gene            complement(1681..2574)
                     /locus_tag="VGA78_07540"
     CDS             complement(1681..2574)
                     /locus_tag="VGA78_07540"
                     /inference="COORDINATES: protein motif:HMM:NF039614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HEX9893762.1"
                     /translation="MRAVQVKEAGLSSNVAPLRDVAVKAPGAAWRTPARVETEWRSLH
                     YTAQPDLEQAIGQHNALVQLLHEAGCRVHTLPPDDATGLDSVYVHDPVVVAPAGAVLC
                     RMGKAARAGEPEVMGRWLAAAGVPIVGRIEPPGVLEGGDVVWLSPRVVAVGEGYRTNR
                     EGIRQLTELLADQVDEVIPVPLPHWTGPDDCLHLMSMLSPVAERVAVVYSRLMPVPFR
                     SRLLGDGWRLIEVPDIEYDRMACNVLPLAPANCLMLEGSPVTQSRLESAGVRVRTFPG
                     SEISLKGGGGPTCLTRPLLRS"
     gene            complement(2556..3812)
                     /locus_tag="VGA78_07545"
     CDS             complement(2556..3812)
                     /locus_tag="VGA78_07545"
                     /inference="COORDINATES: protein motif:HMM:TIGR01910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HEX9893763.1"
                     /translation="MDPIRRAVEARRSDLMGLAQSLVRAPSLPGEEQAVQDLVAARLA
                     AMGLDTMLQPVRFDQLRTHPAFGDDGFTPDGRVNVIGRWKGTGRGRSLILNGHVDVVA
                     AGDPALWQDPPWSGVIRDGWLYGRGSCDMKSGLAAGIMAVQVLQDLGWRPTGDLIIES
                     VVGEESGGCGTLMTIVEGIRADAAVILEPTGLALCPVQSGALTFRLTVRGRAAHGAMR
                     QYGVSAIEKFALLHQAILRLEHERHARNRSLLYTEPEYIAPVSIGTIKGGEWHSTVPE
                     TVVVEGRFGVFPGEPTSAARADLELRVAATAAQDDWLAEHPPRIEWFEGQFESGETMV
                     NHPLIDALAGAHREARGIEPAIRGVSYGSDLRLFTNHAGIAAVLYGPGDVALAHAANE
                     CIRIDEVLEAVTVLAGFVEAWCGQSR"
     gene            3907..4746
                     /locus_tag="VGA78_07550"
     CDS             3907..4746
                     /locus_tag="VGA78_07550"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9893764.1"
                     /translation="MVGLLVVFALQTATPDTLPPSGVIAGVVTDVSHRPIQRAIVTIL
                     PGGREVFTDAKGSFEFRSRAPGLHILAVRALGYRQRLVQVSLGAGEGWRRGVDLALAV
                     HELPEIEARVNAWKPAEYAGTSRYDGFFQRKRLGMGTHLSRDQIDRLGALHFTQILQR
                     VPGFRVAWNPPGSQQPTTVKITRCAEANPPKVALYVDGIRRRSSSSELSQGYGLVITG
                     GRGRRQSGGEYAVEQFAELLDSVNPRDIEMVEVYRGVAQIPADFDRDVCAVIAIWTRW
                     NQG"
     gene            5065..5604
                     /locus_tag="VGA78_07555"
     CDS             5065..5604
                     /locus_tag="VGA78_07555"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Plug domain-containing protein"
                     /protein_id="HEX9893765.1"
                     /translation="MVHHLPEVVTRVNAWKPAEYAGTSRYDGFFQRKRLGFGTFLSRD
                     QIDQLAAIHFTQILQRVPGFRVNYTPPGTQQPPTTVRITRCATDNPPKVAVYVDGIRY
                     RSSRNQLSQGTGLALDGRARRQAGFIKPEEEFAELLDSISPRDIEMIEVYRGVAQIPA
                     DFDRDVCAVIAVWTRWNRG"
     gene            complement(5717..7024)
                     /locus_tag="VGA78_07560"
     CDS             complement(5717..7024)
                     /locus_tag="VGA78_07560"
                     /EC_number="3.5.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF006681.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamate deiminase"
                     /protein_id="HEX9893766.1"
                     /translation="MSVAAVIEAELTWTGAGFEPGIRVVVGDDGRITRVGKLKREPTR
                     VLQGQALLPGFVNAHSHAFQRGLRGLGERFPAGAGSFWTWREAMYGLVEQLGPEDFLA
                     VTTQAFLEMRAAGITTVGEFHYFHHGPAVKDFGYDRLVLKAARAAQLRLVLLVAYYRT
                     GGVGMTLGPGQRRFETPSPEVYWRNMDALARHLGPAQTLGCVVHSVRAANLEELGSIH
                     AEAMRRALPFHIHVEEQRQEIAECREAYQRTPMRVLLDTIGKPERVTAVHCTHTDPED
                     RAAFLEAGGRVCFCPLTEANLGDGLPSLDGQVLDRMCLGTDSNARIDMVEEMRWLEYG
                     QRLRREGRGALRDGQGQVARTLLGAATAAGAASLGVDAGRMAQGLWADFTVLDLNSLA
                     LAGATTDTLLDALIFGADSSVITATCVGGRWQTHRHPRSGRTV"
     gene            complement(7021..8190)
                     /gene="argE"
                     /locus_tag="VGA78_07565"
     CDS             complement(7021..8190)
                     /gene="argE"
                     /locus_tag="VGA78_07565"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008777 - acetylornithine deacetylase
                     activity [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HEX9893767.1"
                     /translation="MPALLDDTALLRRLVAFDSVSRNSNLPIAEFISEYLDRPGVRVR
                     RNASVDQTKTNLIVELGPPVDSASRDGMILSGHMDVVPAEEPEWQSDPFRMEERDDRL
                     VGRGTADMKGFLALAMNRLASADGSRLRRPLALFFTYDEELGTLGAQRFVESWPDPET
                     LPRHVLIGEPTQLKAVRMHKGHLKLRITFHGVSAHSGYPHLGRNAIEPAARAITALAG
                     LRRELAGERPPSAELFPEVPFVALNVGQVEGGAAVNVIPDHCHIDVGLRVLPGMRGAD
                     LAQRIHAVLDTALPGEPFDFEILGDSPPLLVAEDRPVVRSVAQEVHQQGSSSVAFATD
                     AGWLQTAGFDCVIFGPGSIETAHKPNEWMPVSQFRAAGRHLDRLVHRFCLEESAP"
     gene            8271..8744
                     /locus_tag="VGA78_07570"
     CDS             8271..8744
                     /locus_tag="VGA78_07570"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HEX9893768.1"
                     /translation="MPRSPSPIRRSPDLHGGQPLFAGSTVPVQSLLDSIRRGESLDRF
                     LERWPELDLKQVLAVMAWALDDLIQRERIPPSPPQASLLPRTDDKGVINNAADLGADQ
                     VVGRKVLCPACRKLVFRSWPEGWDAHAEHRCAGITAVDPTRRKNEFKKRYGHLFR"
     gene            8775..9311
                     /locus_tag="VGA78_07575"
     CDS             8775..9311
                     /locus_tag="VGA78_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3179 domain-containing (seleno)protein"
                     /protein_id="HEX9893769.1"
                     /translation="MNRRVAAGLLGLVLVAILAVVAIPVFLIMPFKSQTPPGVALSFA
                     LRRWAPLVTLAGLLIGVALVGFLWRKSPGHLRLPSTTFDRLRQSVPLQRILSVLALVP
                     LGAAAWFARQNHFEWLFHPLEGVSRVEAARAGFVKPGDMVMGIVSNGAAMAYPVNQLA
                     YHHVVNDTVGGVPIAATY"
     gene            9228..>9519
                     /locus_tag="VGA78_07580"
     CDS             9228..>9519
                     /locus_tag="VGA78_07580"
                     /inference="COORDINATES: protein motif:HMM:NF022818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:9309..9311,aa:Sec)
                     /transl_table=11
                     /product="DUF3179 domain-containing (seleno)protein"
                     /protein_id="HEX9893770.1"
                     /translation="MAYPVNQLAYHHVVNDTVGGVPIAATYUTLCHTGVVWQAALEGR
                     TLRFRLAGINNQNFLMQDEETGSWWQQITGKAIAGPLKGRRLIRVLHDEVAFR"
BASE COUNT         1547 a         3190 c         3156 g         1626 t
ORIGIN      
        1 ggcggcccag atgcgccgcg atcgctcggt caacacgggt cggagcgctc ggtacgtgcg
       61 acgcagcgtg ctgagctcca ccccatcaat ctacaatgcg cccgtcgtaa atcaatcagt
      121 tatttcttca caatccctaa cgactcagcc ggctgtgctt ccggagcagc tccaccacca
      181 tcgcgtgggg cagcgccggt acccgcaggc cgtcggcccc ggtgaggtcg gtcgcggcca
      241 gcatcgcgtt caggatcgcc tcttcggtgg cgtcgatggt cgcttcgaac agcccgctga
      301 cggcgttgtt ggccagcatc tggagcgtcg cggtgcccga ctcgacatcg gaccgggggt
      361 tggcggtcgt gaacgccaca aaaatgtcac ccgagctgtt ccccccgatg ccgcccatgc
      421 gcccgatgcc gagcgaggcc cgcttgacca ggcgcttgag ctggtggggc agcaacggtg
      481 catcggtggc gaccacgatg atgatggagc cgagttcctc gggctcctcc cgggggggcg
      541 ggccgccgca gcggccgaac cgggcgttag gcggcggatc gatggtgtag cagggcagcg
      601 gctggcccgc ctcgggcacc gacgaccagg gcgttcccgc gatgcggagc tggcggcgtc
      661 cgccgtagtt gcattgcacc agcacgccca cggtccagcc cccaggcgag accttgcggg
      721 acgaagtgcc gatcccgccc ttgaatccgt ggcacatcat cccggtgccg ccgcccacat
      781 tgccttcggc gacggcgccg ccggaggcac cctcaagcgc agcgaaggcg tgctccttgg
      841 tgacgtggaa gccgttgatg tcgttgaggg tcccgtccca ggtctcggcc accaccggca
      901 aggaccagtc gaactccttg ccccgcttta cgatccattc gatgaccgcg tcatggacga
      961 tgccgacgct gtgggtattg gtgatcatga ccggtcctcc caggaagccg gactcctcga
     1021 cccaggtcgt cccggtcatt tcgccgttgc cgttgagggt gaaccaggca gccatcacgt
     1081 tgtcgtccga gttcttgccg cgcggaagaa tcgcggtcac gccggtgcga accggtccct
     1141 ggcccctcac cagcttgcct tcaccccgga tgatggtggt gtgtcccacc tcgaccccgg
     1201 cgacatcggt gatggcgtta aggggaccgg gggtcccggg gaatgggaca cccaggtcgc
     1261 gtccacgcgc ccgggtctgg gcaccgagcg gcagcaccat gcaaagcatc aatggggcga
     1321 gtatcgggcg cattcagacc tccaaccgag ctgggctcgg ggctcgcaat ttgtcatccg
     1381 cagattacgc gatgacgcgg tgacaaacaa taggcgtgat ccgcgccact tgcatttgtg
     1441 aatgggttcg gcggcgtaga gcatgtcgtg cccggtgctc cgactcctcg ccgatactca
     1501 tccgccgatg ccacggatga ccacaacaca atcccttgtc atggatgtcg ttaggcggct
     1561 tgaggcctat tccagggacg aagtattggc gcaatctgcg tcctctgcgg ataacctcaa
     1621 gggacaagga cactgaacaa gacgtatgcc ccggttctgc ggacaggttt gctggttccg
     1681 tcaggaccga agcaggggcc gggtcaagca ggtgggcccg ccgccgccct tgagcgagat
     1741 ctcggagccg ggaaaggtac ggactcggac cccggcggac tcgagccggc tctgcgtcac
     1801 cggggagccc tcgagcatga gacagttggc cggcgccagc ggcaggacgt tgcaggccat
     1861 ccggtcgtat tcgatgtcgg ggacctcgat cagccgccat ccgtcgccga gcaggcggga
     1921 gcggaacggc accggcatca ggcgggagta caccacagca acccgttccg cgaccgggct
     1981 cagcatcgac atcaggtgaa gacaatcatc cgggccggtc caatgcggca gggggaccgg
     2041 aatgacttcg tcgacctgat cggccagtaa ctcagtcagc tgccggatgc cttcgcggtt
     2101 ggtccggtag ccttcaccga ccgcgaccac ccggggggac agccagacga cgtcgccgcc
     2161 ttcgaggact cccggtggct cgatccggcc cacgatcggg acgccggcgg ctgcgagcca
     2221 ccggcccatc acctcgggct ccccggcgcg ggcggccttg cccattcggc acaggaccgc
     2281 gcctgccgga gccaccacca ccggatcgtg cacgtatacc gaatcgagtc cggtggcgtc
     2341 atccggcggg agggtatgaa cccggcaacc ggcctcgtgc agcagctgga ccagtgcatt
     2401 gtgctgcccg atggcctgct ccaggtccgg ttgagcggtg tagtgcaacg agcgccactc
     2461 ggtctcgacc cgcgcgggcg tgcgccaggc cgcgccaggg gctttcaccg ccacgtcgcg
     2521 gagcggcgcc acgttgctcg aaaggccggc ctccttcacc tggactgccc gcaccaggcc
     2581 tccacgaaac cggccaggac cgtcaccgcc tcaagtactt cgtcgatccg aatgcattcg
     2641 ttggccgcgt gggccagggc tacgtcaccc ggcccgtaca gcaccgccgc tatgccggca
     2701 tggttggtga acagccgcag atcggagcca taggagacgc cgcggatggc gggctcgatc
     2761 ccccgcgcct cgcgatgcgc gccggccagt gcgtcgatca gcgggtgatt caccatggtc
     2821 tcacccgact cgaactggcc ctcgaaccac tctatccggg gaggatgctc cgccagccaa
     2881 tcgtcctgcg ccgccgtcgc cgccacccgg agctcgaggt ctgcgcgtgc ggccgaggtc
     2941 ggctcccccg gaaaaacccc gaatcgccct tcgaccacca cggtctcggg gaccgtgctg
     3001 tgccattcac cgcctttgat ggtgccgatg ctgaccggcg caatgtactc gggctcggtg
     3061 tacagcaggc tccggttgcg agcgtggcgc tcgtgttcca accgaagaat ggcctggtgc
     3121 agcagggcaa acttctcgat ggcgctcacg ccgtattgcc gcatggcgcc gtgggccgcc
     3181 cgcccccgga ccgtgagacg gaaggtgagg gcgccagact ggaccgggca gagggccaat
     3241 ccggtcggct ccaggatgac cgcggcgtcg gctcggatcc cttccacgat cgtcatcagg
     3301 gtgccgcacc cgcccgattc ctcgcccacc acgctttcga taatgagatc gccggtcggt
     3361 cgccaaccca ggtcctgcag gacctgtacg gccatgatcc cggccgcgag tcccgacttc
     3421 atgtcgcagg acccccggcc atagagccag ccgtcccgga tcacgccgct ccagggcgga
     3481 tcctgccaga gcgccggatc gccggcggcg accacgtcga catggccgtt caggatcagc
     3541 gaccggcccc gaccggtgcc cttccagcgt ccgatcacgt tcacccggcc atccggggtg
     3601 aagccatcgt cgccgaaggc cggatgggtc cgaagctggt cgaaccgcac cggttgcagc
     3661 atagtgtcca gccccatggc ggccaggcga gcggcgacca agtcctggac cgcctgttcc
     3721 tcgcccggca ggctgggggc ccggaccagg gattgagcca gccccatcag gtcgctccgc
     3781 cgggcctcga cggcccgacg gatggggtcc attcccgggg gggctgctct cgtcattgac
     3841 agggctggtc ggaaaggtca accatagtaa gcgccttcgg ggccggtcgc gaggaagagg
     3901 ggcgccatgg tcgggctgct ggttgtcttt gcgctgcaga cggctactcc ggacactctg
     3961 ccaccatcgg gggtgatcgc cggggtggtc accgacgtct cccatcgtcc cattcaacga
     4021 gccatcgtca ccattctccc gggcggccgg gaggttttca ccgacgcgaa agggagtttc
     4081 gagtttcgat cccgggcgcc cgggctgcac attcttgccg ttcgggccct gggctatcgg
     4141 cagcgcctgg tgcaggtgag cctcggtgcc ggggagggat ggcgccgggg tgtggatctc
     4201 gcgctcgcgg tacacgagct tcccgagatc gaggcccggg tcaacgcctg gaagccggcc
     4261 gagtacgccg gaaccagccg gtatgatggc ttctttcagc ggaagcggct cgggatgggt
     4321 actcacttat cacgggacca gatcgaccgg ctcggcgcgc tgcatttcac ccagatcctg
     4381 cagcgagtgc cggggttccg ggtggcctgg aatccacccg gctcgcagca gcccaccacg
     4441 gtgaagatca cccggtgcgc cgaggcgaat ccacccaagg tggcgctgta cgtcgatggg
     4501 atccggcggc gcagctcgtc cagcgagctc tcgcagggat atggcctggt gatcaccggc
     4561 ggaagaggcc gcaggcagtc gggcggcgag tacgcggtcg aacagttcgc cgagctgctc
     4621 gactcggtca acccacggga catcgaaatg gtcgaggtct accgcggcgt ggcccagatc
     4681 ccggccgatt tcgatcgcga cgtgtgtgcg gtcatcgcga tctggacccg ctggaatcag
     4741 ggctgaaccc gggaagggcc ttcatgttca gtctgttgct cgcgctcgca gtacaagccg
     4801 ctcctcagga cacccttcca cccaaggggg ttatcgttgg cgtcgtaact gatcaatccg
     4861 gccggccgat ccagagagct gtagttcaag tgctcccggg gggcagggac gctctgagca
     4921 gtgcctccgg cgagttcgag tttcgcggtc gggagccggg tcttcatgtg gtgatggtca
     4981 gcgccctcgg gtatcgacgt cagatgctgc acgtggagct ggggccgggc cgccggttgg
     5041 cgaggccgaa tcgccctgcc gctggtggtt catcacctgc cggaagtcgt cactcgggtc
     5101 aacgcctgga agcccgccga atacgccggc acaagccgtt acgacggatt cttccagcgt
     5161 aagcggctgg ggttcgggac ttttctttcg cgcgatcaga tcgaccagct tgcagccatt
     5221 catttcacgc aaatcctgca gcgggttcct ggattccggg ttaactacac tccgcccggc
     5281 acccagcagc cccccacgac cgtcaggatc accaggtgtg ccacggacaa cccacccaag
     5341 gttgccgtgt acgtggacgg tatccgttac cgcagctcga ggaaccagct ttcacagggc
     5401 accggcttag cgttggatgg tcgggcccga agacaggctg gtttcatcaa gcccgaagag
     5461 gagttcgcgg agttgctcga ctcgatcagc ccgcgtgaca tcgaaatgat cgaggtttat
     5521 cgtggtgtcg cccagattcc ggccgatttc gaccgcgacg tctgcgccgt gatcgcggtg
     5581 tggacccggt ggaatcgggg gtagccattt gacgatttaa cgatttgacg ctttgacgat
     5641 tgctcacttg ttttcggaat ccgtgggact caccggactt gcgtccgcaa tcgctaaagc
     5701 gtcaaatcgt tgatcgtcaa acggttctgc cgcttcgcgg atgcctgtga gtttgccatc
     5761 tgccgccgac acaggtggct gtgatcacgc tcgagtccgc tccgaaaatc aaggcatcca
     5821 gcagggtatc ggttgtggcg ccggccaggg ccaggctatt gaggtccagc acggtgaagt
     5881 cggcccagag gccctgagcc attcttccgg cgtctacgcc taacgaggct gctccggctg
     5941 cggtggcggc gccgagcagg gtgcgggcca cctgtccctg tccgtcccgg agcgcgccgc
     6001 gtccctcccg ccgcaggcgt tgaccgtact ccagccaccg catctcctcc accatgtcaa
     6061 tccgggcgtt cgaatcggtg ccgaggcaca tgcggtcgag cacctggcca tccagcgacg
     6121 gcaaaccgtc gcccaggttc gcctcggtga gcgggcagaa gcagaccctc cctccggcct
     6181 cgaggaacgc ggcgcggtct tccggatcag tgtgggtgca gtgcaccgcg gtgacccgct
     6241 ccggcttgcc gatggtgtcc aggagcaccc gcatcggcgt gcgctggtag gcctcgcggc
     6301 attccgcgat ctcctggcgc tgctcctcca catggatatg aaacggaaga gcccgccgca
     6361 tggcttccgc gtgaatcgac cccagctcct ccaggttggc cgcccggacg ctgtggacca
     6421 cacacccaag cgtctgggcc ggccccaggt ggcgggccag ggcatccatg ttccgccagt
     6481 acacctccgg ggatggggtc tcgaagcggc gctgccccgg ccccagcgtc atgcccacgc
     6541 cgccggtgcg gtaatacgcg accagcagga ccagtctgag ctgcgccgcc cgcgccgcct
     6601 tgaggaccag gcggtcgtag ccgaagtcct tcaccgcggg gccatgatgg aaatagtgga
     6661 attcgcccac ggtggtgatg cccgccgcgc gcatttcgag aaaggcctgg gtagtcaccg
     6721 cgaggaaatc ttccggcccc agctgctcca ccagaccgta catcgcctcg cgccaggtcc
     6781 agaaactgcc ggcgccggcg gggaatcgct ctcccaaccc gcgcagtccg cgctgaaagg
     6841 cgtgggaatg cgcgttcacg aagcccggca gcagggcctg accctggagc acccgggtgg
     6901 gctcgcgttt gagctttccc acccgcgtga tgcgaccgtc gtcgccgacc acgacccgga
     6961 tccccggttc gaacccggca ccggtccagg tcagctcggc ttcgatcact gccgccacac
     7021 tcacggggcg ctctcctcga ggcagaaccg gtgcaccagc cggtcgagat ggcggccggc
     7081 ggcccgaaac tgactgaccg gcatccactc gttaggcttg tgcgcggtct cgatgcttcc
     7141 ggggccgaag atcacgcagt cgaaccccgc ggtctggagc cacccggcgt cggtcgcgaa
     7201 ggccacgctg gacgaccctt gctggtggac ctcctgcgcc accgaccgca cgaccggccg
     7261 gtcctccgct accagcaatg gcggactgtc tcccaagatc tcgaaatcga aaggttcgcc
     7321 cggcagcgcg gtgtcgagca cggcgtggat ccgctgggcc aggtcggcgc cacgcatccc
     7381 cggcagcacc cgcagtccca cgtcgatgtg gcagtggtcg ggaatcacat tgacggcggc
     7441 cccaccttcg acctggccca cgttgagcgc cacgaacggc acttccggga agagctcggc
     7501 cgagggcggc cgttcgccgg cgagctcccg gcgtagaccc gcgagcgcgg taatggctcg
     7561 ggccgccggc tcgatggcgt tccggcccag gtggggatat ccgctgtgcg cgctcacgcc
     7621 gtggaacgtg atccggagct tgaggtggcc cttgtgcatc cgcactgctt tgagctgggt
     7681 cggctcaccg atcagcacat gtcgcggcag ggtttcagga tcgggccagc tctcgacgaa
     7741 gcgttgggcg ccgagggttc ccagctcttc atcgtaggtg aaaaagagcg ccagcggtcg
     7801 tcgcaggcgc gatccatcgg cggaggccag ccggttcatc gccagggcca ggaacccctt
     7861 catgtcggcg gttccccggc ccaccaggcg atcgtcgcgc tcctccatgc ggaagggatc
     7921 gctttgccac tcgggctctt cggcggggac cacgtccatg tggcccgaga gaatcattcc
     7981 gtcccgactg gcagagtcga ccggcggccc gagctcgaca atgagattgg tcttggtctg
     8041 gtcgaccgag gcattgcgcc gcacccgcac ccccggccgg tcgagatact cgctgatgaa
     8101 ctccgcgatc ggcaggttgc tgttgcggct gaccgagtcg aacgcaacca ggcggcgcag
     8161 cagagcggta tcgtcgagca gggcgggcac gggtggaagt ctgcaggccg aggcgggggg
     8221 cgggcaagag gcgttgccgg gcctgccccg gcggcctagc ttcggagccg gtgccccgct
     8281 ccccctcacc gattcgccgg tctccggacc ttcacggcgg ccagcctctg tttgccggat
     8341 ccaccgtgcc ggtccagtcc ctcctggact cgattcggcg gggcgaaagc ctggatcggt
     8401 tcctggagcg ctggcccgag ctggacctga agcaggtgct ggcggtgatg gcgtgggcct
     8461 tggacgatct gatccagcgg gagcggatcc cgcccagccc gccccaggcc tcgctgttgc
     8521 cgagaaccga cgacaagggc gtcatcaaca atgccgccga tctcggcgcc gaccaggtgg
     8581 tgggccggaa agtgctgtgt cccgcctgtc gcaagctggt gtttcgatcc tggcccgagg
     8641 gatgggacgc tcacgccgag caccgctgtg ccggcatcac ggcggtggac ccgacccgcc
     8701 ggaagaacga gttcaagaag cggtacggcc atctgtttcg ataatcgcgg gtcgtgagcc
     8761 tcgggaggat tcaaatgaac cgacgtgttg cagctgggct cctggggctg gtcctggtgg
     8821 ccatcctggc cgtcgtggcc atcccggttt ttctcatcat gcccttcaag agccagaccc
     8881 cgcccggtgt cgcgctttcc tttgcgctgc gccgttgggc tcccctggtg accctggcag
     8941 gcctgctgat cggtgtcgcg ctggtcgggt ttctctggcg gaaatcgccg ggtcaccttc
     9001 gactaccttc gaccaccttc gaccgtcttc gacagtccgt acccttgcag cggatcctct
     9061 cagtcctcgc gttggttccg ttgggtgcgg cggcctggtt cgcgcgccag aatcacttcg
     9121 aatggttgtt ccatccgctg gagggcgtgt cacgggtcga agcggcacga gccggtttcg
     9181 tgaagccggg cgatatggtg atggggatcg tcagcaatgg cgccgccatg gcttacccgg
     9241 tgaatcagct ggcctaccat cacgtggtga acgacaccgt gggaggcgtg cccatcgcgg
     9301 ccacctattg aacgctgtgc cacaccgggg tggtgtggca ggcggccctg gaggggcgca
     9361 cgttgcggtt ccggctggca gggatcaaca accagaactt cctgatgcag gacgaggaaa
     9421 ctggcagctg gtggcagcag atcaccggga aggccatcgc cgggcccctc aaaggccggc
     9481 gactgatccg ggtcctgcat gatgaggtgg cgttccgga
//
LOCUS       DASWKS010000260         3413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1231039, whole genome shotgun sequence.
ACCESSION   DASWKS010000260 DASWKS010000000
VERSION     DASWKS010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231039"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..332)
                     /locus_tag="VGA78_07585"
     CDS             complement(99..332)
                     /locus_tag="VGA78_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893771.1"
                     /translation="MNTIQMVLDHTPNEIADLEQDIAVMQERLRDSIARKQLLEQLLM
                     VVQQRQQAERPVGLTLVQEAPALPMRATAGAGR"
     gene            593..680
                     /locus_tag="VGA78_07590"
     tRNA            593..680
                     /locus_tag="VGA78_07590"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:627..629,aa:Ser,seq:gga)
     gene            928..1833
                     /gene="msrP"
                     /locus_tag="VGA78_07595"
     CDS             928..1833
                     /gene="msrP"
                     /locus_tag="VGA78_07595"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEX9893772.1"
                     /translation="MLIRRAPDIPTSEITDESLYWTRREWLAAAGLGAAAFILPVGPP
                     VRRSVQDLKPNSWHDVTGYNNYYEFGTGKDDPARNAGSLKTAPWSIKVEGEVAKAGSY
                     DVEGLFKGLTLEERLYRFRCVEAWSMVVPWNGYPLRDVIKKLEPTSKARFIEFTTLLD
                     PRQMPGQRRGVLDWPYVEGLRMDEAMHPLALLVTGVFGKTLPNQNGAPLRLIAPWKYG
                     FKGGKSIVRIRFLERQPETTWALAAPNEYGFYANVNPEVDHPRWSQRTERRLGKLTRQ
                     PTLMFNGYGDQVAGLYSGMDLRRNF"
     gene            1956..2633
                     /locus_tag="VGA78_07600"
     CDS             1956..2633
                     /locus_tag="VGA78_07600"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEX9893773.1"
                     /translation="MVRQLVKPLLWAAGLAPLAWLVARGFQGELTADPVKYITHFTGR
                     TTLIIVFVTLCVTPLRRFTGWNGLIKVRRLVGLFSFFYAVIHLLIYLVFDRGFVLTEL
                     GEDIAKRPYITVGFTAWLMLLSLAVTSPLAMVRRLGGKRWQALHRLIYLIPILGIVHF
                     TWAQKKDLAPVVPYVVALGIIFAVRLGLRRRLATRPAGGRRSQPPVLPADPSAVPEAP
                     MDHILNS"
     gene            2633..2998
                     /locus_tag="VGA78_07605"
     CDS             2633..2998
                     /locus_tag="VGA78_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893774.1"
                     /translation="MKRTRLASLLLLLASPALGGTLLPVLHPCPVDAPWTLAGGDHAD
                     HGNHHPAPAPAPEGNSHDCTCIDSCTPGPALVVAPDLRPVLPPAAFQPRLGPAGPDAS
                     LILAPTAERLPPATAPPLV"
     gene            3116..>3413
                     /locus_tag="VGA78_07610"
     CDS             3116..>3413
                     /locus_tag="VGA78_07610"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX9893775.1"
                     /translation="MTTWFKQRPGLAAVLVLSLAGAPPRAAQQGSVEGTVRSTSGEPI
                     HGASVRVSTATTVTDTAGRFRLGSVPAGRSLIAVRAVGWHPSAHSCRAPYCHPER"
BASE COUNT          538 a         1182 c         1065 g          628 t
ORIGIN      
        1 tcgagggccg aacgaagtcg aagaaggtcg ccagagctcg ccgagccaag aaggccaggg
       61 cgtagcggcc tcttcgacta tcttcgaccg ccttcgacct accgcccggc ccctgccgtc
      121 gcgcgcatcg gcagggccgg cgcctcctgc accagggtca ggcccaccgg ccgttccgcc
      181 tgctgccgct gctggaccac catgagcaac tgctccagca gctgcttgcg ggcaatgctg
      241 tcccgcaggc gttcctgcat gaccgcaata tcctgttcca gatccgcgat ctcattgggg
      301 gtgtggtcca ggaccatttg aatcgtgttc atacctcgct ccctccccgg aagtcgtgac
      361 tgcgcagtaa tgtgacgcat gacggctaaa caggcgagtt ctgtgcctaa ccgcagcgtg
      421 ctaaccgctg gcacatcata ggggtcgatt tgcggtgtcg ggcctcggct atagcagtgt
      481 ggcggggagg cagcgggact gactaggtct tgaacagccc gttccccgtt cgccgctccc
      541 cgtccgccga acccttttcg cggctggata cggccactac tttccgcccc cgggacaggt
      601 ggccgagtgg tttaaggcgc acgcctggag agcgtgtata cgtcaaaagc gtatcgaggg
      661 ttcgaatccc tccctgtccg ctgtcgtgga agcagggagc aggaaccagg gagcaggaag
      721 cagggagcag gaagcaggga gcaggaacca gggatcaggc tagaatggaa gctccaggtg
      781 ggtcctggtc cctggtccct ggtccctggt ccctgctccc tggtccctgc tccctgctcc
      841 ctgcttcccg ctccctgctt cctgtttcag aaccattccc ccccgcccgg cgttatatac
      901 tgacataccg tctccaaggc ccgacccatg ctgattcgca gggcgcccga catccccacg
      961 agtgagatca ccgacgagtc gctctactgg acccggcggg aatggctggc cgcggccggc
     1021 ctgggcgcgg cagcctttat cctgcccgtc ggtccgcccg tccgtcggtc cgtccaggat
     1081 ttgaagccca acagctggca cgatgtgacc ggctacaaca actattacga attcggcacc
     1141 gggaaggacg atccggcccg gaacgccggg tcgctcaaga ccgcgccttg gagcatcaag
     1201 gtcgagggtg aggtcgccaa ggcgggcagc tacgacgtcg aaggtctgtt caagggtctg
     1261 acgctggagg agcggctcta ccgcttccgc tgcgtggaag cctggagcat ggtggtgccc
     1321 tggaacgggt atccgctgcg tgacgtcatc aagaagctcg agcccacctc caaggcccga
     1381 ttcatcgagt tcacgacgct cctcgatccc cgccagatgc cgggtcagcg ccggggggtg
     1441 ctggattggc cctatgtgga gggcctccgg atggatgagg ccatgcatcc gctcgcactc
     1501 ctcgttaccg gcgtgttcgg caagaccctg cccaaccaga acggcgcgcc gctgcggctg
     1561 atcgcgccct ggaaatacgg cttcaagggc ggcaagtcga tcgtccggat ccggtttctg
     1621 gagcggcagc cggagaccac ctgggccctg gcggcgccta acgagtacgg cttctatgcg
     1681 aacgtcaacc ccgaagtcga ccacccccgc tggagtcaga ggaccgaacg gcgcctgggc
     1741 aagctgactc gccagccgac cctgatgttc aacggctacg gcgaccaggt ggcgggtctg
     1801 tactcgggga tggacctgcg acggaacttc taggaagcag ggagcgggga gcagggacca
     1861 gggagcggcg gctgattctc cctggctcca gcttcctgct ccctgctccc tgctccctgc
     1921 ttcctgctcc cttttcttag atgaccgagt ctcaagtggt tcgacagttg gtgaagcccc
     1981 tgctctgggc cgccggcctc gcgccgctgg cctggctggt ggcgcggggg ttccagggcg
     2041 agctgacggc cgacccggtc aagtacatta cccacttcac cggccgcacc accctcatca
     2101 ttgtgtttgt gaccctgtgc gtgacgccac tgcgccggtt caccggctgg aacggtctga
     2161 tcaaggtgcg acggctggtc gggctgttca gcttcttcta cgccgtcatc cacctcctca
     2221 tttatctcgt cttcgaccgc ggcttcgtcc tgaccgagct gggtgaggac atcgccaagc
     2281 gtccctacat caccgtcggg ttcaccgcct ggctgatgtt gctgtcgctg gcggtcacat
     2341 cgcccctggc gatggtgcgt cgcctgggag ggaagcgctg gcaggcgctg catcggctga
     2401 tttacctgat tcctatcctg gggatcgtgc acttcacctg ggctcagaag aaggatctgg
     2461 ccccggtggt cccctacgtg gtggcgttgg ggatcatctt cgccgtgcgg ctcgggttac
     2521 gccgccggct cgcgacccgc ccagcggggg gacggcgatc ccaaccgccg gttctcccag
     2581 cggatccctc cgccgtgcca gaagcaccca tggaccacat tctgaactca taatgaagcg
     2641 gacccggctc gcctctctcc tcctgctgct ggcctccccg gccctgggtg gcaccctgct
     2701 gccggtgctc catccctgcc cggtcgacgc tccctggacc ctggcgggag gcgaccacgc
     2761 cgaccatggc aaccatcacc cggctccggc tccggcaccc gaggggaact ctcacgattg
     2821 tacctgcatc gatagctgca cccccggccc cgcgctggtc gtggcaccgg atctccggcc
     2881 cgtcctgcca ccggccgcgt ttcagccgcg gctggggccg gccggtcccg atgccagcct
     2941 gattctggcg ccgacggcgg aacgcctccc tcccgcaacc gcaccaccgc tggtctgact
     3001 ctccgctgac tcacaggcag gggagctgat cccccgtccc ggtccaaacc accctggggc
     3061 gcaccgctcc tcgggtcgag cgccattccg gttggtatgt gcgccggacg gattcatgac
     3121 cacctggttc aagcaacgcc ccggtctcgc cgccgtgctg gtcctgtcat tggcaggagc
     3181 gcctccacgg gccgcccaac aaggctcggt ggaaggcacc gtacgctcga cgtccggtga
     3241 accgatccac ggcgcctcgg ttcgggtatc caccgcgacc accgtgaccg acactgcggg
     3301 acgattccgg ctgggatcgg ttcccgccgg gcgttccctg atcgcggtac gcgccgtggg
     3361 atggcatccg agcgcgcatt catgccgagc gccctattgt catcctgagc gaa
//
LOCUS       DASWKS010000261         5548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2365131, whole genome shotgun sequence.
ACCESSION   DASWKS010000261 DASWKS010000000
VERSION     DASWKS010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2365131"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="VGA78_07615"
     CDS             complement(<1..1023)
                     /locus_tag="VGA78_07615"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX9893776.1"
                     /translation="MSRELQAELARVAATLGAPDAEFVLERPRDAGHGDLATNLALVL
                     AKPLRSNPRVIAEKVVAELALPPTLVTRTEIAGPGFINFWLAGDQLSLQVQAIIEQGS
                     DYGKSVIGTGRTVNIEFVSANPTGPLHVGHGRGAALGDGIAALYEWTGHRVTREFYIN
                     DAGVQIDKLVQSLWARIQQGRGGRLEVPEGGYHGEYLREAADLALQRFPRALFEGAYP
                     DARPILRPWILQLLREEQRQLLEQFRVRFDRWTSEQSLYDQGKVAHALEVLAGRGLTY
                     EQDGALWLRTSEFGDDKDRVLRKQDGSYTYLVPDIAYHVDKHERGYDLAIDVWGADHH
                     GYIPRLR"
     gene            complement(1020..1325)
                     /locus_tag="VGA78_07620"
     CDS             complement(1020..1325)
                     /locus_tag="VGA78_07620"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX9893777.1"
                     /translation="MPTYEYRCPEGHEFEKFQKMSDSPRVKCPTCGRLATRRISGGAG
                     LVFKGSGFYITDYGKDGKGARKAGDDSSPKPEAASKEPAKETPKTEPGPKPGKKAGE"
     gene            complement(1357..2244)
                     /locus_tag="VGA78_07625"
     CDS             complement(1357..2244)
                     /locus_tag="VGA78_07625"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX9893778.1"
                     /translation="MTPRRRRPTRDDLLQENLDLRRRLRNRDQGPPAPDPEELLGVVE
                     AFADGFVMLHEDLTVLALSRGAERLFGAQSHAMLGQPVARLFPGETIVTHVRQLEAEH
                     QTGVVKPRRLSLQARRGSGEEFRVEVTLAPHRFSGTSGWILLLRNLAVLQAVLETLDV
                     VEQRYEALTEVIPVAMFRTDAQGRCLYVNRRWSELTGYPLLDALGDGWRLVVHPHDHH
                     RVMRESEEPLVNGLPSRNEHRIRRADGATIWVLVEVVPERDSSGRVLGYVGTLTDITA
                     QRAPQDMADGGFRLEQLTS"
     gene            complement(2241..3323)
                     /locus_tag="VGA78_07630"
     CDS             complement(2241..3323)
                     /locus_tag="VGA78_07630"
                     /inference="COORDINATES: protein motif:HMM:NF017935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX9893779.1"
                     /translation="MTGRLPALTLFGRAVRRRCPNCGGRPLFRSWVKMVPRCPSCGLE
                     LNREESGYSLGGFWLNMLFAEGTTAVLFIITLLVTWPDPPWTLLQYGLPSLALLTPVL
                     FYPFSKTLFLALDLAVRPASREEARTPDSAGPPAMTASVPSPREARITVPRSARYYAL
                     GGDRAREAWFGLHGFGQLAAPFVQSFAPVATPGRLVVAPEALNYYYTDPKTRKVGATW
                     MTSEDRLTQIADYVRYLDLVADEVLTRPGIERVEVHGFSQGCATAVRWVALGRVRPAR
                     LVLWGGGVPPDLDLTRHGEALSRADLTLIIGDRDEYITEKLVQAEAERLEASGLRYTL
                     RRFQGGHVIPWPILEEVAGAAPKAAR"
     gene            complement(3320..4843)
                     /locus_tag="VGA78_07635"
     CDS             complement(3320..4843)
                     /locus_tag="VGA78_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEX9893780.1"
                     /translation="MSRAWYGPEQWSGDLGEPGAWPFTRGIHPTMYQTRLWTMRQYAG
                     FGTAQDTNARFRALLQAGQTGLSTAFDLPTQMGYDSDHPMAQGEVGRVGVAIDTVDDL
                     HDLFRDIPLDRVTTSMTINATAAILLAMYVVVGEETGVPHHRLGGTMQNDILKEYIAR
                     GTYIYPAEPSLRLIVDVVRFVTDEGMNLNPISISGYHMREAGATAVQEVGFTFANALE
                     YVGRALQAGIPLAGFGPRLSFFFAAHNDLFEEAAKFRAARRLWARLMRERFDADDATC
                     RLRFHTQTGGVTLQAQQPLNNVVRTTVQALAAVLGGTQSLHTNGYDEALALPSAEAAT
                     LALRTQQVLAYESGTTAAVDPLGGSWYVESLTDRIEAEARRLIEEVDRLGGAARAVEQ
                     GWFQDAIARSAYAQQQAVEAGQQVLVGVNRFTDHQPIPAVPSPDYSALADQQTARLAA
                     ARAGRDGARSSAALAGLEQAAGGSDPVMPRILEAVRARATLGEISDTLRGVWGVYRS"
     gene            complement(4840..>5548)
                     /locus_tag="VGA78_07640"
     CDS             complement(4840..>5548)
                     /locus_tag="VGA78_07640"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEX9893781.1"
                     /translation="IAFHDHNRARYAVLVDPLDGSSNIDVNGAVGTIFSIYRRVTSGK
                     SNVRDVLQPGNQQVAAGYVMYGSSVMLVYSTGNGVHGFTLDPTIGEFLLSHENLCMPE
                     CGLYLSVNESNFYRWNKGIQTAVRAFHGEFPDRMKAKNSRYIGSLVADFHRNLIAGGV
                     FLYPGDGKNPNGKLRLSYEANPMAFIAEHAGGAATNGLDRILDIIPGELHQRTPLVIG
                     SKQDVEFVTRTLRAQPE"
BASE COUNT          888 a         1873 c         1891 g          896 t
ORIGIN      
        1 gcgcagccgg gggatgtagc cgtggtggtc ggcgccccac acgtcgatgg ccagatcgta
       61 gccccgttcg tgcttgtcga cgtggtaggc gatgtcgggc accagatagg tatagctgcc
      121 gtcctgcttg cggagcaccc ggtccttgtc gtcgccgaac tccgaggtgc ggagccagag
      181 ggcgccgtcc tgctcgtagg tgagaccccg gccggccagc acttccagcg cgtgcgcgac
      241 cttgccctgg tcgtagagcg attgctccga ggtccagcgg tcgaaccgga cccggaactg
      301 ctccagcagc tggcgctgct cctcccggag cagctgcaga atccagggac gcaggatggg
      361 gcgcgcgtcc gggtaagcgc cctcgaacag cgcccgcggg aaccgctgca gcgccaggtc
      421 cgctgcctcg cgcaggtatt cgccgtgata gccgccttcg ggaacctcga gccggccgcc
      481 gcggccctgc tggatccggg cccagagact ctgcaccagc ttgtcgatct gaaccccggc
      541 gtcgttgatg tagaactcgc gggtgacgcg gtgaccggtc cactcgtaca gggcggcgat
      601 gccgtcaccc agcgccgcac cgcggccgtg cccgacatgc aacgggccgg tggggttggc
      661 agagacgaac tcgatattga cggtccgtcc ggtgccgatc acgctcttcc cgtagtcgga
      721 gccctgctcg atgattgcct gaacctggag cgagagctga tcaccagcca gccagaagtt
      781 gatgaagccg gggccggcga tctcggtccg ggttaccaag gtgggaggga gcgccagctc
      841 ggcaacgacc ttttccgcga tcacccgggg attggaacgc aacggcttgg ccagcaccag
      901 ggcgaggttg gtcgccagat cgccgtgacc ggcgtcccgg ggccgctcca gcacgaactc
      961 ggcatccggc gcaccgagcg tggccgccac ccgggccagc tcggcttgca gctcccggct
     1021 cactcgccgg ccttcttccc gggcttgggt cccggttcgg tcttgggggt ttccttggcg
     1081 ggctctttgg aagcggcttc gggcttgggg ctggaatcgt cgccggcctt ccgggcgcct
     1141 ttgccgtcct tgccgtagtc ggtgatgtag aatcccgatc ccttgaagac cagcccggcg
     1201 cccccggaaa tccgccgggt cgccaaacgc ccgcaggtgg gacacttcac ccggggcgaa
     1261 tcgctcattt tctggaactt ctcgaactcg tgcccttccg ggcagcggta ctcgtacgtc
     1321 ggcatgcccc ctcgttcgca gctaaaagca aacagcctaa gaagttagct gttcgagccg
     1381 gaatccacca tcggccatgt cctgaggagc tctctgcgcc gtgatgtcgg tgagggtgcc
     1441 gacgtaaccc agcaccctgc cgctggagtc gcgctcggga accacctcca ccaggaccca
     1501 gatcgtggcg ccgtcggccc gccggatccg gtgctcgttt cgggaaggca gaccgttcac
     1561 gagcggctct tccgattccc gcatgacgcg gtggtgatcg tgggggtgaa ccaccaaccg
     1621 ccacccgtcg cccagcgcat cgagcagggg gtagcccgtc agctcgctcc agcgccggtt
     1681 cacgtagaga caccggccct gcgcatcggt ccggaacatg gcgaccggaa tcacctcggt
     1741 cagggcttcg tagcgctgct cgaccacatc gagggtttcg agcacggcct gcagcaccgc
     1801 caggttgcgg agcaagagaa tccagccgct ggtgccgctg aagcgatggg gcgccagggt
     1861 gacctcgact cggaactcct cgcccgatcc gcgccgggct tgcagcgaga gccggcgggg
     1921 cttcaccacc ccggtctggt gttccgcttc cagctgccgc acgtgggtga cgatggtctc
     1981 gcccgggaac agccgggcga cgggttgccc gagcatggca tgggactgcg ctccgaagag
     2041 ccgctccgcg ccgcgactca gggccagaac cgtcagatcc tcgtggagca tcacgaagcc
     2101 atcggcgaag gcctccacca cgcctaacaa ctcttcggga tcgggcgccg ggggcccctg
     2161 gtcgcggttt cggaggcgcc gccgcaggtc gagattctcc tgcagcagat cgtcccgggt
     2221 gggacgccgg cgtcgggggg tcaccgggcc gccttcggtg ccgcgcccgc gacctcctcc
     2281 agaatcggcc agggaatcac gtgtcctcct tggaatcgtc ggagcgtgta acgcagcccg
     2341 gatgcctcga gtcgctcggc ctcggcctgc accagtttct cggtgatgta ttcgtcccgg
     2401 tcgccgatga tgagcgtcaa gtcggcccga ctcagggcct cgccgtgccg ggtcagatcc
     2461 agatcgggcg gcacaccacc accccagaga accagtcggg ccggtcggac ccggcccaac
     2521 gccacccagc ggaccgcggt ggcacagccc tgagagaatc cgtgcacctc cacccgctcg
     2581 atccccggcc gggtcagcac ctcatccgcg accaggtcga ggtatcgcac gtagtcggcg
     2641 atctgggtga gccggtcttc gctggtcatc caggtcgcgc cgaccttcct ggtcttgggg
     2701 tcggtgtagt agtagttgag cgcctccggc gccaccacca gccggccggg tgtggcgacc
     2761 ggggcgaagg actggacgaa cggcgcggcc agttgcccga atccgtgcaa cccgaaccag
     2821 gcttcccggg ctcgatcgcc acccagcgcg tagtatcggg cgctgcgggg aaccgtgatc
     2881 cgggcttccc gcgggctcgg gacggaagcg gtcatggccg gggggcccgc cgagtccggg
     2941 gtccgggctt cttcgcggga ggcgggccgt accgccaggt ccagcgccag aaacagggtc
     3001 ttggaaaacg gatagaagag caccggcgtg agcagggcca ggctgggcag gccgtattgc
     3061 agcagggtcc agggtggatc gggccaggtc acgagcagcg tgatgatgaa gaggacagcg
     3121 gtggttccct cggcgaacag catgttgagc cagaaacccc ccagactgta accgctctct
     3181 tcgcggttca gctccagccc gcaggaggga cagcgcggca ccatcttcac ccaggagcgg
     3241 aacagcggcc ggccgccaca attggggcag cggcgacgga cagcgcggcc gaagagcgtg
     3301 agcgccggga gccggccggt catgaacggt agacacccca cacgccgcga agcgtgtcgc
     3361 tgatttctcc cagcgtggct cgggcccgca ccgcctcgag gatccggggc atgaccgggt
     3421 cactccctcc cgccgcctgc tccagtcccg ccagcgccgc gctggagcgg gccccatccc
     3481 ggccggctcg cgccgcggcc agccgggcgg tctgctggtc cgccagcgcg gaatagtcgg
     3541 gcgagggcac cgccgggatg ggctggtggt cggtgaagcg attgaccccg accagcacct
     3601 gctggccggc ttcaacggcc tgctgctggg cataggcgct tcgggcgatg gcgtcctgga
     3661 accagccctg ctccaccgcg cgggccgccc cacccagccg gtccacctct tcgatgagcc
     3721 gccgtgcctc ggcttcaatc cggtcggtga gcgactcgac gtaccagctg ccacccaggg
     3781 gatcgacggc ggccgtcgtg ccgctttcgt aggccaggac ctgctgggtt cggagcgcca
     3841 gggtggcggc ctcggcggag ggcaacgcca gcgcctcgtc gtagccgttg gtgtgcaatg
     3901 actgggtacc acccagcacc gccgcgagtg cctgcacggt ggtgcgcacc acgttgttga
     3961 gcggctgctg cgcctgcagc gtcacccccc cggtctgggt gtgaaaccgg agccggcagg
     4021 tggcgtcgtc ggcgtcgaac cgctcccgca tgagccgggc ccagagccgg cgggccgccc
     4081 ggaacttggc cgcttcctcg aacagatcgt tgtgggccgc gaaaaagaac gagagccggg
     4141 gaccgaagcc cgccaacggg atcccggcct ggagtgcgcg ccccacatat tcgagcgcat
     4201 tggcgaaggt gaatccgact tcctgcaccg ccgtggcgcc ggcttcgcgc atgtggtagc
     4261 cgctgatcga gatcggattg aggttcattc cctcgtcggt gacgaagcgg acgacatcga
     4321 cgatgagccg gagcgagggc tcggccggat agatgtaggt cccccgcgcg atgtattcct
     4381 tgaggatgtc gttctgcatg gtgccgccca gccggtggtg cggcaccccg gtctcttcgc
     4441 cgaccaccac gtacatcgcc agcagaatcg cggcggtggc attgatggtc atggaggtgg
     4501 tgacccggtc gagcggaata tcccgaaaca aatcgtgcag atcgtccacc gtgtcgatgg
     4561 ccacgccgac ccgccccact tccccctggg ccatcggatg gtccgaatcg taccccatct
     4621 gggtcgggag atcgaaggcg gtggacaggc cggtctggcc ggcctgcagc agggcccgga
     4681 accgagcgtt ggtgtcctgc gcggtgccga agccggcata ctggcgcatg gtccagagcc
     4741 gggtctggta catggtcggg tggatgcccc gggtgaacgg ccaggccccc ggctcaccca
     4801 gatcgccgct ccactgctcc ggcccatacc aggcgcggct cattccggct gagcccgcaa
     4861 cgtccgagtg acgaactcaa cgtcctgctt cgacccgatg accagcgggg tgcgctggtg
     4921 cagctcaccc gggatgatat ccaaaatgcg gtcgagtccg ttggtggccg ccccgccggc
     4981 gtgctcggcg atgaatgcca tgggattggc ctcgtaggac agccgcagct tgccgttggg
     5041 attcttgccg tcgcccggat agaggaacac ccctccggcg atcaggttgc gatggaagtc
     5101 ggccaccagc gagccgatgt agcggctgtt cttggccttc atccggtcgg gaaactcgcc
     5161 atggaaggcg cgcaccgcgg tctgaatccc cttgttccag cgatagaagt tgctctcgtt
     5221 cacgctcagg tagagcccgc actccggcat gcacaggttc tcgtgcgaca gcaggaactc
     5281 gccgatggtg ggatcgaggg tgaagccgtg cacgccgttg ccggtgctgt agaccagcat
     5341 cacgctcgag ccgtacatca cgtagccggc agcaacctgc tggttgccgg gctggagcac
     5401 gtcccgcaca ttggacttgc cggaggtcac ccggcgataa atggagaaga tggtgccgac
     5461 ggctccgttg acgtcgatat tcgagctgcc atccaaggga tcgaccagga ccgcataccg
     5521 ggcccggttg tggtcgtgaa acgcgatc
//
LOCUS       DASWKS010000262         1876 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2720152, whole genome shotgun sequence.
ACCESSION   DASWKS010000262 DASWKS010000000
VERSION     DASWKS010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2720152"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1619)
                     /locus_tag="VGA78_07645"
     CDS             complement(<1..1619)
                     /locus_tag="VGA78_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893782.1"
                     /translation="MWSSLSSSRVRYSLPAILLALSPALAASQTLPALAASQSVPSRA
                     SGADSVVIAAGARHQAGGLHRFFFGSNYRDLWTTPVMVPVLDLHSFAGGLRPLEAGGG
                     KQTKSLRFITPEGVEYVFRGVDKANEWNPPPRFKGTVVATISSDQVSTSHPAAALVVA
                     PLLEAAGVLHATPAFVIMPDDPLLGEFRADFAGRLGIIEQYPSKPEHAAGFAGAVEII
                     DSEELRQLLDSDPRQRVDARAMLAARLMDMLLNDWDRHPGQWKWGRLQSSPRTAWVPI
                     PRDRDKAFASYRGVIGTLARLAAPTLMLFEGRYPSLRGLTWNSLELDRRVLGGLARPV
                     WDSVTGELVRRVTDSVIDAAVQAMPPEYQRAGPLLASKLKLRRDLLPGAANRFYRLLV
                     AVADIHATDTADRATVTRVDDRFVDVRVESEGGTPSFLRRFDGQETGEIRVYLHGGDD
                     SALVTGNVQHSIPVRIIGGNGTNRLLDSSRVRGRGHPARLYDVGRVNGVGYGPDTLYN
                     RRPWVKEKGELVSPGPDRGGGFAPILGVSLEG"
     gene            complement(1738..1869)
                     /locus_tag="VGA78_07650"
     CDS             complement(1738..1869)
                     /locus_tag="VGA78_07650"
                     /inference="COORDINATES: protein motif:HMM:NF033488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEX9893783.1"
                     /translation="MLLVAWFLGFSVIPVGGSLIHLLLVLAIIAVAWHFLGGRRVRA"
BASE COUNT          331 a          622 c          641 g          282 t
ORIGIN      
        1 ccctcgaggc tgacgcccag gatgggtgcg aaccctcccc cgcgatcggg tcccggcgac
       61 acgagctcac ccttttcctt gacccagggc cgccggttgt agagcgtgtc cggcccatat
      121 ccgacgccgt tcaccctacc aacatcgtag aggcgggccg gatgaccccg accgcggacg
      181 cgggacgagt cgagcaaccg attggtgccg ttcccgccga tgatgcggac ggggatgcta
      241 tgctggacgt tgccggtgac cagggcgctg tcgtcgccac cgtggagata gacccggatc
      301 tccccggtct cctgcccgtc gaaccgacgg agaaaggacg gcgtgccgcc ctccgattcc
      361 acgcgcacgt cgacgaaccg gtcatcgacc cgggtgacgg tagcccggtc ggccgtgtcg
      421 gttgcgtgga tgtccgcgac ggccacgaga aggcgataga aacggttcgc ggcgccgggc
      481 agaaggtcac ggcgcagctt gagcttggag gcgagcagcg ggcccgcccg ctggtactcc
      541 gggggcatgg cctgcacggc ggcatcgatc actgagtcgg tgacccggcg aaccagttca
      601 ccggtcaccg agtcccacac cggcctcgcc aggcctccca gcacacgcct gtcgagttcc
      661 aggctgttcc acgtgagtcc ccggaggctg ggataccggc cctcgaagag catcagagtg
      721 ggagctgcca gcctggccag cgtccctatg acacctcggt aggaggcgaa ggccttgtcc
      781 cggtcgcgcg ggatgggcac ccaggctgtc cgcgggctcg attgcagccg accccatttc
      841 cattggcccg ggtggcgatc ccagtcgttg agcaacatgt ccatcagccg cgcggccagc
      901 atggcgcgcg cgtcaacccg ctggcgggga tcgctgtcga ggagctggcg aagctcttcg
      961 ctatcgatga tctcgaccgc tccggcgaac ccggcggcgt gctccggctt gctgggatat
     1021 tgctcgatga tgccgagccg gccggcgaaa tccgcccgaa actcgcccag cagcgggtcg
     1081 tctggcatga tgacgaaggc gggtgtggca tggagcacgc cggcggcctc gagcaacggc
     1141 gcgacgacca gggcggccgc cggatggctc gtgctgacct gatcgctgga aatcgttgcc
     1201 accacggtcc ccttgaacct gggtggtggg ttccattcgt tggccttgtc gacgccccgg
     1261 aagacgtatt ccaccccctc cggggtgatg aaacgcagcg atttcgtctg ctttccgccc
     1321 cccgcctcga gcgggcgaag accaccggcg aaagaatgga ggtccagcac cggtaccatc
     1381 acgggcgtgg tccagagatc gcgatagttg cttccgaaga agaaccggtg cagaccgccg
     1441 gcctggtgcc gggcgcctgc cgcgatcacg acgctatcgg cgcccgatgc acgggacgga
     1501 acgctttggg aggcggcaag tgccggcagg gtttgggagg cggcaagtgc cggcgagagc
     1561 gccagcagaa tggcgggaag gctgtaccgg acgcgagacg agctcaacga agaccacatt
     1621 tggacgtgcc tcagggccag cggtagaggg gccagatgct cagcccccct ccccgcgtgg
     1681 tcccattgtc acgggggagg tcctgagcga gtacgtcgtc cagcgttcag ccgccgctca
     1741 agcacggacg cgacgccctc caaggaagtg ccacgcgacg gcgatgatcg cgagcaccag
     1801 aaggaggtga atgaggcttc cccccacggg gattacgctg aacccgagaa accaagccac
     1861 gagcagaatg accgcc
//
LOCUS       DASWKS010000263        12815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_507143, whole genome shotgun sequence.
ACCESSION   DASWKS010000263 DASWKS010000000
VERSION     DASWKS010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507143"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1278)
                     /locus_tag="VGA78_07655"
     CDS             complement(37..1278)
                     /locus_tag="VGA78_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9893784.1"
                     /translation="MAWLEAVRLALHTIRAQKLKSFFSLVGVLIGVTFLIAVVSIVQG
                     MNVYMEDQFANRLVGLNAFQLRRMPGINTGNVSEETWREWLRRPRITYADADYIQSRV
                     ETPAVFSRYCSERLVVARGGKLAKDIEVMGTDASWFAMKRWNIPQGRPFSPQEVRAGS
                     AVVVIGDLLAEKLFEGSDPIGKDVSISGLPYRVIGVVEKQGNLFGISMDKFVVVPFNA
                     PVRREICRWNTLDEFHVQTANLQVMQLAKDEVESIMRVRRGLKPAQENNFALQTAEGA
                     LEGWRKISRIMFAALPGLVAISLVVGGIVIMNIMLMAVAERTREIGIRKALGARRRDI
                     LAQFVVESATLSLVGAILGIGLGIALAFTVKGLTPFPAAVAPWSVGLAVVLGISVGMA
                     AGIYPANRASKLDPITALRAE"
     gene            complement(1278..1982)
                     /locus_tag="VGA78_07660"
     CDS             complement(1278..1982)
                     /locus_tag="VGA78_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9893785.1"
                     /translation="MSDLVIQLRDLHREYLMGSEQIRALQGVTLAIRRNEYLAIMGPS
                     GSGKSTLMNLLGCLDTPSAGEYWLNGQEVSRLSDNALARVRNREIGFVFQTFNLLPRA
                     SALQNVELPMVYAGASARERRDRAADALGRVGLGDRMDHRPNELSGGQRQRVAIARAL
                     VNRPSILLADEPTGNLDSATSEGIMRVFGQLQAQGQTVILVTHEADIAAHAHRVVTLR
                     DGRIENDRAQTRVAAA"
     gene            complement(1979..3250)
                     /locus_tag="VGA78_07665"
     CDS             complement(1979..3250)
                     /locus_tag="VGA78_07665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9893786.1"
                     /translation="MSRRTKIGLFVGLLVAVVVAITALSASRRGGRATEVRIEPVTKR
                     DLVAVVTASGKIEAKSQVDISSDITGRIVKITVREGDLVKAGQLLVQIDPSQYQSVVQ
                     RSEAFLQASQASLMQVRANRDQTKRQLDRALEIKRTNPNLISAESVEQAQQAYDVALA
                     TYNSNASQVDQARAQLQEAKDNLAKTRIYAPIAGRVTRLAVEEGEVAVPGTFSRETGL
                     LMRVSDLSVILAKVDVDETDVVRLSLGDSVAVSIDAFPDTSFIGRVTEVGNSAKLAAQ
                     SGGASTDRAVDFEVEIQLENPPSDIRPDLSATARIVTDTRKESLSIPIIALTVREHED
                     VPNELKSVDSATRKKHEREGVFVVRGGLASFLPVKVGIAGEEHFEVVTGLKAGDSIVA
                     GPYQAIRDMKDSTKVKQQQERPTNGRPGAPK"
     gene            complement(3263..4816)
                     /locus_tag="VGA78_07670"
     CDS             complement(3263..4816)
                     /locus_tag="VGA78_07670"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9893787.1"
                     /translation="MICRSAFVFVLALVPGLAPAQQPAAVPPRPEPTAQLSLSEALTQ
                     ARSKSPAYRQVLNDAGPARVAVRAAYGAFLPQLDVRGGMGYVGSGSSTFGGSTFNQTS
                     PSITSSYGVDLSLSLSGATLVGPATEKATQRAVEEDISNATITLDNDVTVQYLTALQA
                     VAQTDVARQQVQRNTEFLELARARFQVGQATLLDVRQAEVTKGRSDLDLLVAAQAENE
                     AKLELLRRIGVELAGSVTELALTDSFPVTEPAFDERQLLSTAQSDNPSLRALRAREDA
                     SSQNVKAARSQYLPTLSFVAGWSGFTQEFTNTDVLLRGRTENAKIDLASCDFQNALIG
                     ALPGGGVPGFPNGGIISDCRNFVGLDATGEALSPEIRADLLGANNVFPWSFREQPFQA
                     SLRISVPIFQGFSRNLQVARAHAAREDAEEAVRARQLQVRTEVQGRYLGIQTAWQAIA
                     VQEGSRAAARDQLQLAQERFRLGNGSALEVTDAQTAVTRAEADYVNAVYAYHRAIAAL
                     EFAVGRRLR"
     gene            complement(4932..5564)
                     /locus_tag="VGA78_07675"
     CDS             complement(4932..5564)
                     /locus_tag="VGA78_07675"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX9893788.1"
                     /translation="MNRPVRLHELTPDEARESLRASGRLLLPAGTLEMRGRHLPLGTD
                     SMLLERLADDLSARTGVPRAPVVPVGVHFRRDETAPGVAALTRKTLHRVMNELIASWE
                     EGAGVRETIILTAHAAEPHVEALSTIRARGSVRVVDVLGFDFRAFLDHPRPTVHGGEL
                     DTSLLLFVAPELVRDAETVTRLSASREKGGRIHEYILEQVEARWLRPQPV"
     gene            5577..9476
                     /locus_tag="VGA78_07680"
     CDS             5577..9476
                     /locus_tag="VGA78_07680"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9893789.1"
                     /translation="MLGWIVGIGFVAIAAGEWLRSPEPGPVVLAAAAGFVVAAATSWG
                     SDSWRRRTAGLVGLILAGALVVTEAWRIRLDRSDHERDVELARRDAVSISTELDRLRE
                     RLERIANAAARIDVTNAEAALKALRRLSAGDGPTLAVGLLADDGTPQVWSGRFLIAPA
                     VNGDSLEVIRTAFYVVLEVRRHRTGGGTVVVAAPLWRDPTVPAVVEDLASPLGSQVGA
                     TIRFERPLDAPAGLTRWPAAAPVLAIAAEPPERSEAVSAHVARSSRSLGWLVVLLLVT
                     TALAGESPMLRLLPVALGLVLALRAPLGQALWPAAFSPAAFFSRTLGPLSGSAGALAA
                     AGAVASVLATVLWYSVRLPLWPARIAGYLIALATPYLTRQLGHGITPPATGVPVSLWL
                     VWHLALLLPTVALIVLACGLLRVRAAPGRPEWPVIGGAWSIVVAAVGVLVFTGRPGWP
                     AWYTALWLPAILLVTRPAPVWSTLLGISLAAGSGAALITWGSALAGRTDLALSDLAVL
                     GVEPDPLAEPRLVDLGNAIAAGGGAFDAAELYRAWRHSGLHRERYPIRLMVWSGPTPV
                     VDVAIDAIPLSDAELGALALTAVPGQAVAQVPAGPGVHHVLTRRLDSARVLIVAVAPR
                     SQLVPPATLGRVLEGERPQLYSMAVNPVTLTDSTRVAGRWRREDWALRASRLVVLPAG
                     SHEAKIVIGLGRPETIAVRGGLVILGDLVIIVLLWLAAAWVAGIAIRVRSPLARRSFE
                     TRLALTLAVFFIVPAALLSVLSVRQLAGEARQSRDLVLQRILRDAAASTGEAVRETAR
                     RLDTSIGIYREGLLESASEPVLPALGLLPPLLEPEAWHALVLEGDSFAAPRTQRLVLT
                     GYIPIPNASGRAPAVLSTVQPAGDRELVERQLDTAFFFVLATLLGVVAAVGAARLAAR
                     MLSRPVDELRQTALALGRGLPAPPREVTPTREFAPVFDAFGRMAADVRAGQDALEAAR
                     RRTESVLATVSTGVVAVDGLGQILLANRTAEEMLGTPLLRGRPLADAVDPAWRPLIDL
                     LGSTDAPLRDLELDDAARRYAVRLARLEGVEGWVIAVNDVTQATRAARVLAWADVANQ
                     VAHAIKNPLTPLRLGIQHLRRVRERRPEHFDTALEETSERLLAEIDRLDAIARGFSRF
                     AAPAESASPLEAVELKSVAEEVAGLHHLAPGLDITVEIPEHIRVRARRDELKEVLLNL
                     CDNSRNADAREVIMRFEPNTLLVQDDGKGIPAEVLPHIFEPRFSTTSSGSGLGLAIVR
                     GVVEGWGGSITVRSTPGEGAEFAIQFPEASSDETTSR"
     gene            9565..10020
                     /locus_tag="VGA78_07685"
     CDS             9565..10020
                     /locus_tag="VGA78_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893790.1"
                     /translation="MDPRNANVLAVHDLLTETLAAANDAGAGFNFGVALFPRPGRFEA
                     LVFGVVTRGGESTILTYRMLEGLAEHHAWVSGRVVAILRDAKSFGPPRATPTGLLDQP
                     VLHLMLTCWMGPDRDDTERSTPFESTLFAGDLRAPILLLLKERPAGWPL"
     gene            complement(10061..11299)
                     /locus_tag="VGA78_07690"
     CDS             complement(10061..11299)
                     /locus_tag="VGA78_07690"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893791.1"
                     /translation="MPLSRFAAILLLVPGLVAAQDPVRPPIDAALDRIHQFNEWTLAQ
                     QVELCQVAAPPFKEAARAAEFKRRLEQLELRNARIDSVGNVIAERPGTQGGPRVMLSA
                     HLDTVFPDSIEVTVRREGTRFEGPGIGDDCRGLAVLLAVARTLQESEVRTLGPIIFVG
                     TVGEEGAGNLRGVRHLVDRQSAGRIDNFISVDGTGLSAVHRAVGSHRYRVSIRGPGGH
                     SFGDFGIPNPLHALGRAIAGIAQLTVPVSPRTTFSVGIIEGGTSVNAIAMAGSMDIDL
                     RSEGQAALDTLDARMRHAVAAAVDAEHARWPGTTARLTAELRDIGKRPAATQPDTSAI
                     IRATVAAARALGFVPALTASSTDANYPMSTGIPSVTIDGGGTGGGAHSLGEWYDDGKD
                     GWRGPQWALLLVLTLAGLAG"
     gene            complement(11319..11693)
                     /locus_tag="VGA78_07695"
     CDS             complement(11319..11693)
                     /locus_tag="VGA78_07695"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9893792.1"
                     /translation="MQPIQPASMPVPKGHYTPGISANGLVFVSGQLPMDASGSIVSGG
                     VVGQTERALRNVEMILQAAGSGLDRVVQMTIYIPDGELWGEVNQVYARIMGNHRPARA
                     VVPVAELHYGALIEIQAIGLAP"
     gene            complement(11715..12542)
                     /gene="trpA"
                     /locus_tag="VGA78_07700"
     CDS             complement(11715..12542)
                     /gene="trpA"
                     /locus_tag="VGA78_07700"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF012511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX9893793.1"
                     /translation="MTRYSQLFRRLEAQHEGAFVPFLVLGDPDPETSLELIRCLVSNG
                     ADALELGLPFSDPVADGPVIQAAGTRALSRGATLDQAWTILAAARSEFPAVPIGLLVY
                     ANLVLHRSAESFYRAAAEAGVDSVLVADVPLLESGRLRTFAQARGIAPVLIAPPNADD
                     ERLAAVAAQSEGYVYVTSRPGVTGADQALQQDGARVIRTLRAAGSAPPLLGFGIAAPD
                     HVRRALELGAAGAISGSAVVQHVAGNLEDRIQMLRSVGRFTAEMKAATRIGSLSPQS"
     gene            complement(12539..>12815)
                     /locus_tag="VGA78_07705"
     CDS             complement(12539..>12815)
                     /locus_tag="VGA78_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893794.1"
                     /translation="PEHACLQEIGRAEYVGCTDHDALEGFRLLARAEGILPALESAHA
                     IAVGVRLARGAARPMEILVNLSGRGDKDLETVLRHPEEGSGERGGGL"
BASE COUNT         1938 a         4326 c         4412 g         2139 t
ORIGIN      
        1 ccaatcgggc gagcgaggcg acgaagccgg tccggctcat tcggccctca gggcggtgat
       61 gggatcgagc ttggaggcgc ggttggcggg atagatcccc gcagccatgc cgaccgagat
      121 gcctaacacc acagccaggc ccaccgacca gggggcaacc gcggcgggaa agggtgtgag
      181 ccccttcacg gtgaacgcca gcgcgatgcc gagtccgatg ccgaggatgg cgccgaccag
      241 ggagagcgtg gccgactcca ccacgaattg cgccaggatg tcacgcctgc gcgcgcccag
      301 ggccttccgg atcccgatct cccgggtccg ttccgccacc gccatcaaca ttatattcat
      361 gatcacgatg ccgccgacca ccagcgagat ggcgaccagc ccgggaaggg cggcaaacat
      421 gatccgagag atcttgcgcc agccttccag cgccccctcg gcggtctgga gcgcgaaatt
      481 gttttcttga gccggcttga gcccacgccg gacccgcatg atcgactcga cctcgtcttt
      541 ggccagctgc atcacctgca ggttggccgt ctgcacgtgg aactcgtcca gcgtgttcca
      601 gcggcagatt tcgcgccgga ccggggcgtt gaaggggacc accacgaact tgtccatcga
      661 gatcccgaac aggttgcctt gcttctccac caccccgatc acgcgatagg gcagtccgct
      721 gatggacacg tcttttccga tcggatcgct cccctcgaac agcttttccg ccagcaggtc
      781 accgatcacg acgacggccg acccggcccg gacttcctgg ggcgagaagg ggcgcccctg
      841 cggaatgttc cagcgtttca tcgcgaacca gctggcgtcg gtacccatca cttcgatgtc
      901 cttggccagc ttgccgcccc gggccacaac gagccgctcg gagcagtaac gggaaaagac
      961 ggccggggtt tccacccggg actggatgta atccgcgtcg gcataggtaa tacggggacg
     1021 gcgcaaccac tcccgccagg tttcctcgga gacgttaccc gtgttgatgc cgggcatgcg
     1081 gcgcagctgg aaggcattga ggcccaccag ccggttggcg aactgatctt ccatgtacac
     1141 gttcatgccc tgcacgatgg acacgacggc gatcaggaag gtcacaccaa tcagcacgcc
     1201 caccaacgag aagaagctct tgagcttctg ggcccggatg gtgtgcaggg cgagccggac
     1261 cgcctcgagc caggccatca ggccgcggcc acccgggtct gggcccggtc gttctcgatc
     1321 cggccgtccc gcagagtgac gacccgatgg gcgtgggccg cgatatcggc ctcgtgggtc
     1381 accaggatga cggtctgtcc ctgggcctgg agctggccga agacccgcat gatgccttcg
     1441 ctggtggcgc tgtccagatt gccggtgggc tcgtcggcca gcagaatcga gggccggttc
     1501 accagcgccc gggcgatggc cacgcgctgg cgttggccgc cggagagctc gttgggccgg
     1561 tggtccatcc ggtcacccaa ccccacccgg ccgagggcgt ccgcggcccg gtcgcgccgc
     1621 tcccgggcgc tggccccggc atacaccatc ggcagctcca cgttctgcag ggccgaggcg
     1681 cgcggcagca ggttgaaggt ctgaaacacg aagccgatct cgcggttccg gacccgggcc
     1741 agcgcgttgt ccgacaggcg cgagacctcc tgcccgttga gccagtactc gccggccgac
     1801 ggggtatcga ggcatcccag caggttcatg agggtcgact tgcccgagcc ggagggcccc
     1861 atgatcgcca ggtactcatt gcggcggatg gccagggtca cgccctgcag cgcccgaatc
     1921 tgctcgctgc ccatcaggta ctcgcggtgc aggtcacgca gctggatgac caggtcgctc
     1981 acttgggcgc tcccggtcgg ccgttcgtcg gccgctcctg ctgctgcttc accttggtgc
     2041 tgtccttcat gtcgcggatg gcttgatagg gcccggcaac gattgagtcc ccggccttga
     2101 gcccggtgac gacttcgaag tgctcttcac cggcgatccc gaccttgacc ggcaggaacg
     2161 aggcgagccc gccccggacc acgaagacgc cctcccgctc gtgcttcttg cgggtggcac
     2221 tgtcgaccga cttgagctcg ttcggcacgt cttcatgctc ccgaaccgtc agcgcgatga
     2281 tcgggatcga gagcgattcc ttacgggtgt cggtcacgat ccgggcggtg gcgctcaggt
     2341 cgggccggat gtcgctcgga gggttttcca gctggatctc gacctcgaaa tccaccgccc
     2401 gatcggtgct ggcgccgccc gactgagccg ccagcttggc gctgttgccg acctcggtca
     2461 cccggcctat gaagctggta tcggggaagg catcgatcga cacggcgacc gaatcgccca
     2521 gcgagagccg gacgacatcg gtttcgtcca cgtccacctt ggccaggatc accgagaggt
     2581 cggacacccg catcagcagg ccggtctcgc gggagaaggt gcccggcacg gcgacctcgc
     2641 cctcctccac ggccaggcgg gtcactcggc cggcaatcgg cgcgtagatc cgggtcttgg
     2701 ccagattgtc cttggcctcc tgcagctggg cccgggcctg atcgacctgg ctcgcattgg
     2761 agttgtaggt cgccagcgcc acgtcgtacg cctgctgggc ctgctccacc gactcggccg
     2821 agatcaggtt ggggttggtc cgcttgatct cgagggcgcg atccagctgc cgcttggtct
     2881 gatcccggtt ggccctgacc tgcatcagcg aggcctggct cgcctgcagg aacgcttccg
     2941 agcgctgcac caccgactgg tactgggacg ggtcgatctg gaccagcagc tggcccgcct
     3001 tgaccagatc gccctctcgc accgtgatct tgacgatgcg gccggtgatg tcggagctga
     3061 tgtccacctg ggacttcgct tcgatcttgc cacttgcggt caccaccgcc acgagatccc
     3121 gcttggtcac cggctcgatc cggacctccg tggcccgccc gccgcggcgg gaggccgaga
     3181 gagccgtgat ggcgacgacc accgccacca gcagcccgac gaagagtccg atcttggtgc
     3241 gacgcgacat ggcgttcctc gcttaacgga gacgacggcc caccgcgaac tcgagcgcgg
     3301 cgatggcgcg gtgataggcg tacacagcgt tcacgtaatc ggcctcggcc cgggtgacgg
     3361 cggtttgcgc gtcggtcact tcaagcgcgc tgccgttccc cagccggaac cgttcctggg
     3421 ccagctgcag ctggtcccgg gcggccgccc ggctgccctc ctgcaccgcg atggcctgcc
     3481 aggccgtctg aatcccgagg tagcgcccct ggacttcggt acgaacctgg agttggcgcg
     3541 cgcggaccgc ctcctcggcg tcctctcgag ccgcgtgggc ccgagccacc tgaagattcc
     3601 ggctgaagcc ctgaaagatc gggaccgaga tccgcagcga agcctggaag ggctgttccc
     3661 ggaagctcca ggggaacacg ttgttagcgc ccagaaggtc ggcccgaatc tcgggcgaga
     3721 gcgcctcgcc ggtggcgtcc agccccacga agttgcggca gtcggaaatg atgcccccat
     3781 tcgggaatcc cgggacgccg ccacccggca gcgcgccgat cagcgcgttc tggaaatcac
     3841 agctggcgag atcgatcttg gcattctcgg tccggcctct gagcagcacg tcggtgttgg
     3901 tgaactcctg ggtgaatccg ctccaccccg ccacgaagct cagggtcggc agatactgcg
     3961 accgggccgc cttcacattc tggctgctgg cgtcctccct ggctcggagg gcgcggagcg
     4021 aggggttgtc cgattgggcg gtggacagca gttgacgctc gtcgaaggcc ggctcggtca
     4081 ccgggaacga atcggtgagc gcgagctcgg tgaccgaccc cgccaactcc accccgatcc
     4141 gccggagcag ctcgagcttc gcttcgttct cagcctgggc cgccaccagc agatcgagat
     4201 cggagcgacc tttggtgact tcggcctggc gtacatccag cagagtggcc tgacccacct
     4261 ggaaccgggc ccgcgccagc tccaggaatt cggtattgcg ctgcacctgt tgccgcgcca
     4321 cgtcggtctg cgccaccgcc tgcagcgcgg tcaggtactg gacggtcacg tcgttgtcga
     4381 gggtaatcgt cgcgttgctg atgtcctcct ccacggcccg ctgggtagcc ttttccgtgg
     4441 ccggccccac cagggtggcc ccgctcagcg aaaggctcag atccaccccg tagctggagg
     4501 tgatggacgg cgaggtctgg ttgaaggtcg acccgccgaa ggtcgaggag ccggagccga
     4561 cgtatcccat cccgccgcgg acatcgagtt gggggaggaa ggcaccatag gccgcccgca
     4621 ccgcgactcg cgccggaccg gcatcgttca agacctgccg gtaggcggga ctcttggacc
     4681 gggcctgggt cagcgcctca ctcaaggaga gctgggcggt gggctccggc cggggtggga
     4741 ctgcggcggg ctgctgggcc ggggccaacc cggggaccag agccaagaca aaaacgaagg
     4801 cggagcggca gatcatctca cgacttccat ggcagagtgt aaaggatgca accacagggc
     4861 gttagacgga ctgtggacga taaaagtttc agcttgtgac gtgtcttcgt aagtttatgt
     4921 tgaacattga gttaaacagg ctgtggccga agccaccgag cctccacctg ctccaaaatg
     4981 tactcatgta tccggccccc cttttcccgg gaagctgaaa gccgagtcac cgtctcggca
     5041 tctcgcacca gctccggggc cacgaagagc agcagcgaag tatccagctc gccgccgtgc
     5101 acggtgggcc gggggtgatc gaggaaggct cggaaatcga atccgaggac atcgaccact
     5161 cgcacgctgc cgcgcgcgcg gatggtgctg agcgcctcca catgcggctc ggccgcatgg
     5221 gcggtgagga tgatggtctc gcgcacccct gcgccctcct cccacgacgc gataagttcg
     5281 ttcatgaccc gatgcaaagt cttgcgggtg agagctgcga cccccggcgc ggtctcgtcg
     5341 cgtcggaaat gcactccgac cggcaccacc ggcgcgcggg gcaccccggt gcgggctgaa
     5401 agatcgtcgg ccaagcgctc gagcagcatg ctgtcggtgc cgagcgggag gtggcgacct
     5461 cgcatctcga gagtcccggc cggaagcagg agccggccgg aggctcgcag cgactcccgc
     5521 gcctcgtccg gggtcagttc gtggagtcgt acaggacggt tcatctgacg cctcggatgc
     5581 tcggttggat cgtcgggatc gggttcgtgg cgattgccgc gggcgaatgg ctgcgcagtc
     5641 cggagcccgg tccggtggtg ctggccgcgg cggcgggttt cgtggtggcc gccgccacca
     5701 gttggggtag cgactcgtgg cgccgccgga ctgcggggct ggtggggctg attctggcag
     5761 gcgctctcgt ggtcaccgag gcatggcgga tccggctgga tcgatccgac cacgagcgtg
     5821 atgtcgagct ggcccggcgc gacgcggtct cgatctcgac cgagctcgac cggctgcggg
     5881 aacggttgga acgaatcgcc aacgcggccg cccggatcga tgtcacgaac gccgaggccg
     5941 ccctgaaggc gctccggcgg ctctccgccg gcgacggacc cacgctggcg gtcggcctcc
     6001 tggcggacga tggaacgccc caggtctggt cgggtcggtt tctgatagcg cccgcggtaa
     6061 atggagactc gctcgaagtc attcgaacag cattctacgt ggtgctcgag gttcgccgcc
     6121 atcggaccgg cggcgggaca gtggtcgtgg ccgctccgct gtggcgcgat cccacggtac
     6181 ctgcggtggt ggaagatctg gcctccccgc tgggtagtca ggtaggtgcc accatccggt
     6241 tcgaacggcc gctcgatgct cccgccggat tgacgcgctg gcccgcggcc gcgccggtgc
     6301 tcgccatcgc ggccgaaccg ccggaacgct ccgaagcggt ctcggcccat gtggcgcgat
     6361 cgtctcgcag cctcggctgg ctggtcgttt tgctgctggt caccacggcc cttgccggcg
     6421 aaagcccgat gctccggctg ctgccggtgg cgttgggatt ggtgctggcg ctgcgcgcgc
     6481 ctctgggtca ggcgctgtgg ccggcggcgt tttcgcccgc cgctttcttc agccgaaccc
     6541 tggggccgct gtcgggatcg gccggcgcgt tggccgccgc cggtgcggtg gcatcggtgc
     6601 tcgcgaccgt gctgtggtat tcggtccgct tgccgctctg gccggcgcga atagcgggtt
     6661 acctgatcgc gctcgctacg ccttacctca cccgccagct gggtcacggc attacgccgc
     6721 cggccaccgg tgttccggtt tctctctggc tggtctggca cctcgcgttg ttgttgccca
     6781 ccgtcgccct gatcgtgctg gcctgcgggc tgttgcgggt gcgggccgcg ccgggcagac
     6841 cggaatggcc ggtgatcggt ggggcctgga gcatcgtggt ggccgcggtg ggtgttctgg
     6901 tcttcaccgg ccggccggga tggccggcgt ggtataccgc gctctggcta cccgccattc
     6961 tgctggtcac ccggccggct ccggtgtggt ccacgctcct ggggatctcg cttgccgccg
     7021 gatcgggcgc ggcgctcatc acctggggga gtgccctggc ggggcgaacc gacctggctc
     7081 tctcggacct cgcggtattg ggcgtggagc ccgatccgct ggcggagccg cggctggtgg
     7141 atctggggaa tgcgatcgct gcagggggcg gggctttcga cgccgcggag ctctaccgcg
     7201 cctggcgcca ctccggtctg caccgtgaac ggtatcccat ccggctgatg gtgtggtccg
     7261 gtccgacgcc ggtggtcgac gtggccatcg acgcgattcc gctctccgac gccgagctcg
     7321 gcgcgctggc gctgacggcg gttccgggtc aggcggtggc ccaggtgcca gcaggaccgg
     7381 gggtccatca cgtcctcacc cgccggctcg actccgcccg ggtgctgatc gtggcggtgg
     7441 cgccgcggtc gcagctggtg ccgccggcca cactggggcg ggtgctggaa ggcgagcgac
     7501 cccagcttta cagcatggcg gtgaatccgg tgaccctcac cgattccacc cgcgtggcag
     7561 gccggtggcg gcgggaagac tgggccttgc gcgcgtcccg gctggtggtg ctgccggccg
     7621 gatcgcatga agccaagatc gtcatcgggc tggggcggcc ggagaccatc gcggtgcgcg
     7681 ggggtctggt gatcctgggt gatctggtca tcatcgtcct gctctggctg gccgcggcgt
     7741 gggtggcagg gatcgcgatc cgggtgcgat ctccgttggc ccgccgctcc ttcgaaaccc
     7801 ggctggcgct gaccctggcc gttttcttca tcgtgccggc ggcgctgctg tcggtcctca
     7861 gcgtccgaca attggcgggt gaagcccgcc agagccgcga tctggtcctg caacgaatcc
     7921 tgcgcgacgc ggccgcatcg accggggagg cggtgcgcga aaccgcccgg cggctggata
     7981 ccagcatcgg catttatcgc gagggattgc tcgagtccgc cagcgagccg gtattgccgg
     8041 cgctggggct gctgccgccg ctgctcgagc cggaagcgtg gcacgcgctg gtgctggaag
     8101 gcgattcctt cgcggcacca cggacccagc ggctggtgct gaccgggtac atcccgatcc
     8161 cgaacgccag cggccgcgcc cccgcggtgc tcagtacggt ccagccggcc ggggaccgtg
     8221 aactggtcga gcggcagctc gataccgcgt tcttcttcgt gctggcgact ctgctgggcg
     8281 tggtggccgc ggtcggcgcc gcgcggctcg cggcccggat gttgagccgg ccggtggacg
     8341 agctgcggca gaccgccctg gcgttaggca gagggctccc ggctcctccg cgcgaagtca
     8401 cgccaacccg ggaattcgcc ccggtgttcg atgcgttcgg tcgcatggcg gccgacgtcc
     8461 gggcagggca ggacgccctg gaggccgcgc ggcgtcgtac cgagtcggtg ctggcgacgg
     8521 tctcgaccgg ggtggtcgcc gtggacgggt tgggccagat cctgctggcc aatcgcaccg
     8581 cggaagaaat gctcggcacg cctctgcttc ggggccgccc cctggccgac gcggtcgacc
     8641 cggcgtggcg gcccctgatc gatctgctcg gcagcactga cgccccgctc cgcgatctgg
     8701 agctcgacga cgcggcccgc cggtatgcgg tccggctggc ccggctcgag ggcgtcgaag
     8761 gttgggtcat cgcggtgaat gacgtcaccc aggccacccg ggccgcgaga gtgctcgcct
     8821 gggccgacgt ggcgaatcag gtggcgcatg ccatcaagaa cccgctcact ccgctccggc
     8881 tcggtatcca gcatctgcgg cgggtacggg aacggcggcc cgaacacttc gataccgcgc
     8941 tggaggagac ttcggagcgg ctgctggcgg agatcgaccg gctggacgcg atcgcgcggg
     9001 gcttcagccg tttcgccgcc ccggccgaat ccgcgtcgcc gctcgaggcg gtggagctca
     9061 agtcggtggc ggaggaggtg gccgggttgc atcacctcgc tcccgggctg gacatcacgg
     9121 tcgagatccc cgagcacatc cgggtccgag ccaggcggga cgagctcaag gaagtcctgc
     9181 tcaacctgtg cgacaacagc cgcaatgcgg acgcacgcga agtgatcatg cgcttcgagc
     9241 cgaatacgct gctggtgcag gacgatggga agggaattcc cgccgaggtg ctgcctcata
     9301 tcttcgaacc ccgattctcg acgacgtcct cgggatccgg tctggggctc gccatcgtgc
     9361 gaggggtggt tgaagggtgg ggcggctcga tcacggtccg cagcacaccc ggtgaaggag
     9421 cggagttcgc catccagttt cccgaagctt ccagcgatga gaccaccagc cggtagcctt
     9481 cgacctcttc gaccccttcg acctccttcg accgcgcagt cggcccgctc cctgcatagc
     9541 gtaccggtct ggaggtaccg tcgagtggat ccacgcaacg ccaacgtcct ggccgtgcac
     9601 gacctattga ccgaaaccct tgccgcggcg aacgatgcgg gggccgggtt caactttggt
     9661 gtggccctct tcccgcggcc cggtcggttc gaagcgctgg tgttcggagt cgtcacccgt
     9721 ggcggggagt ccacaatcct gacctatcgg atgctggagg gcctggccga gcatcatgcc
     9781 tgggtttccg gccgggtcgt ggcgatcctg cgcgatgcca agtcgttcgg tccaccgcgc
     9841 gcaaccccga cgggactgct cgaccagccg gtgctgcacc tgatgctcac ctgttggatg
     9901 gggccggatc gggatgatac cgagcggagt accccgttcg agagtacgct gtttgcgggc
     9961 gacctgcggg cgccgattct gttgctactg aaagagcggc ccgccgggtg gccgctgtaa
    10021 cagcaggact aaggacttgg tgagtccttc gtcctggtgg tcagcccgcc agcccggcca
    10081 gagtcagcac cagcagcaag gcccactgcg gcccgcgcca accgtccttc ccgtcgtcat
    10141 accattcgcc gagtgagtgg gctccaccac cggttccacc gccgtcgatc gtgaccgagg
    10201 gaatcccggt gctcatggga tagttggcgt cggtgctcga ggccgtcagg gcggggacaa
    10261 agcccagggc gcgcgcggcg gccaccgtgg cgcggatgat agcgctggtg tccggctggg
    10321 tcgcagccgg ccgctttcca atgtcgcgca gctcggcggt gagacgggcc gtggtgccgg
    10381 gccagcgcgc gtgttcggca tcgaccgccg cggccaccgc gtgccgcatc ctggcgtcga
    10441 gggtgtccag tgcggcctgg ccctccgaac ggaggtcgat gtccatcgag ccggccatgg
    10501 cgatggcgtt gaccgacgtt cctccttcga tgatccccac gctgaatgtg gtccgaggcg
    10561 aaaccggaac ggtgagctgc gcgatcccgg cgatggcccg tcccagagcg tggagcggat
    10621 tgggaatgcc aaaatccccg aagctgtgcc caccgggtcc gcggatgctg acccggtagc
    10681 gatgacttcc gaccgcccga tggaccgcgc tgagtccggt cccgtcgacc gagatgaaat
    10741 tatcgatccg gcccgcgctc tgccgatcga ccaggtgacg cacgccgcgg agattgccgg
    10801 ccccttcctc gccgaccgtg ccgacgaaga tgatcggacc cagggtccgg acctcggatt
    10861 cctgaagggt acgggccacc gctaatagca ccgccagccc gcggcagtca tcgccgatcc
    10921 ctgggccttc gaatcgggtc ccctcccgcc ggacggtcac ctcgatgctg tcgggaaaca
    10981 cggtgtccag atgggcgctc agcatcaccc gggggccgcc ctgggtcccg ggccgttccg
    11041 cgatgacgtt cccgaccgag tcgatccggg cgttgcgcaa ctcgagctgc tccagccgcc
    11101 gtttgaactc ggcggcccgg gccgcctcct tgaacggcgg ggccgctacc tggcacagct
    11161 ccacctgctg ggccagggtc cattcgttga attggtggat gcgatccagc gccgcgtcga
    11221 tcggcggacg caccggatcc tgggcggcca ccagcccggg aaccaacagg agaatcgcag
    11281 cgaaccggga aaggggcatg gcgagaagat agcgcaggtc agggggcgag cccgattgcc
    11341 tggatctcga tcaaggcacc atagtggagc tcggccaccg gtaccaccgc gcgggccgga
    11401 cggtgattgc ccatgatccg ggcgtagacc tgattcactt cgccccacag ctcgccgtcg
    11461 ggtatgtaga tagtcatctg caccactcga tccagtccgc ttcccgccgc ctggaggatc
    11521 atctccacgt tgcgaagcgc ccgttcggtt tggccgacga caccgccgga gacgatactg
    11581 ccgctggcat ccatcggcag ctgccccgag acgaatacca atccgttggc gctgatcccg
    11641 ggcgtatagt gtcccttggg caccggcatg gacgcaggct gaatgggctg catggtaacc
    11701 tcaggactca gggctcaaga ctgaggacta agcgacccga ttcgggtcgc ggccttcatc
    11761 tcggcggtga accggcccac gctccggagc atttggatcc ggtcttccag gtttcccgcc
    11821 acgtgctgca ccactgcgga acccgagatc gctcccgccg ccccgagctc gagggcccgg
    11881 cgcacgtggt cgggggccgc gatgccgaag cccagcaggg gcggcgcgga gccggccgct
    11941 cgcagggttc ggatgactcg ggcgccgtcc tgctgcagcg cctgatccgc gccggtgacg
    12001 ccgggacgcg acgtgacata cacgtagcct tcgctctgag ccgccacggc cgcaagacgc
    12061 tcgtcgtccg cgttgggcgg ggcgatcagc acaggcgcga tacctcgggc ctgggcgaag
    12121 gtccgcagcc ggcccgactc caggagcggg acatcggcta ccagaacgga atcgactccc
    12181 gcctccgccg ccgcccggta aaaggactcg gcgctccggt ggaggaccag gttggcgtag
    12241 accagcaggc cgatcgggac ggcgggaaac tcgctgcggg cggctgccag gatggtccag
    12301 gcctggtcga gcgtagcccc ccgcgacagg gcccgagtcc cggccgcctg gatgaccgga
    12361 ccatcagcca cgggatcact gaaaggaagg cctaactcca gggcgtcggc accgttggag
    12421 accaggcagc gaatcagttc gaggctggtt tccggatcgg gatcacccag aaccagaaac
    12481 ggtacgaacg ccccctcgtg ctgggcttcg aggcgacgaa acagctggct gtagcgggtc
    12541 aaagcccgcc tcccctctcc ccgcttccct cttccgggtg tcggaggacg gtctcgagat
    12601 ccttgtcgcc tcttcccgag agattgacca gaatctccat cggccgagcc gcgccccggg
    12661 ccaaccggac ccccacggcg atggcgtggg ctgactcgag ggccggcaga attccctcgg
    12721 ccctcgccag caggcggaac ccttccagcg cgtcgtggtc agtgcagccc acgtattccg
    12781 ctcgcccgat ctcctgcaga caggcgtgtt ccggg
//
LOCUS       DASWKS010000264         3856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2368158, whole genome shotgun sequence.
ACCESSION   DASWKS010000264 DASWKS010000000
VERSION     DASWKS010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3856
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2368158"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..467)
                     /locus_tag="VGA78_07710"
     CDS             complement(84..467)
                     /locus_tag="VGA78_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9893795.1"
                     /translation="MIGTIHTDRAPKAIGPYSQATTWSELVFTAGQIALDPVSMDVVP
                     GGIAEQTDRVLQNLRAVLEAAGSGLDRVLKTTVFLADMADFAAMNEVYTNYFGQHRPA
                     RSTVAAAGLPRGVRVEIDCVAFRNP"
     gene            complement(697..2379)
                     /locus_tag="VGA78_07715"
     CDS             complement(697..2379)
                     /locus_tag="VGA78_07715"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEX9893796.1"
                     /translation="MSATIPVPSDIAIAQAATLRPISEVAADAGLGPEEFLPYGRYKA
                     KVTAAAVAGRAPRGRLVLVTGINPTPAGEGKSTVTVGVSQAFRRLGKKAMVCIREPSL
                     GPVFGVKGGAAGGGYAQVVPMDEINLHFTGDFHAISSAHNLLSALLDNHLHQGNALGI
                     DSRRITWPRTIDMNDRALRSAVVGLGGLNGGPTREERWVIIPGSEVMAILCLAADLPD
                     LEARCGRIIVGLTRDRKPVTAHDLKAAGAMTLLLKDALLPNLVQTLEGGPALVHGGPF
                     GNIAHGCNSLAATRLGLSLADIVLTEAGFGADLGAEKFFDIKCRMGGLQPEAAVVVAT
                     VRALKMHGGVNKTALGTPDVPALERGLANLEAHVTNVGKFGVPVVVALNRFVSDAPEE
                     IDGVLEACARWGIRAAVSEVWAKGGEGGEAVARELLALLEEGKAAFKPLYDTDQPIAA
                     KIDTIAREIYGADGVDLLPAAQRAIAQCEAMALGHTPVCIAKTQYSFSDDPTRLGRPR
                     GFRITIRDVYPSAGAGFVVALAGDIMTMPGLSKTPAAEAMKVHADGTIEGLF"
     gene            complement(2376..3167)
                     /locus_tag="VGA78_07720"
     CDS             complement(2376..3167)
                     /locus_tag="VGA78_07720"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEX9893797.1"
                     /translation="MLVDTHCHLADPAFDADRDAVLARSRAAGVWHVVVVGETPERAR
                     QAIGLALRVPGVSATAGLHPHEAKAWSNDTATWLAQALTDPVVVAVGETGLDYHYDFS
                     PRDLQLKAFEAQLQLAATLGRPAIIHAREADPDIISVLRNQPGAMAILHSFSSGPDLL
                     RAAVALGHYVSWSGMITFRNWQLDGLMREVPLDRLLVETDAPYLAPVPHRGKRNEPAF
                     VRATAERLAAVVGLEIEACMAQTGANAVRVFGTRLAGTSDERPTP"
     gene            complement(3174..>3856)
                     /gene="secF"
                     /locus_tag="VGA78_07725"
     CDS             complement(3174..>3856)
                     /gene="secF"
                     /locus_tag="VGA78_07725"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEX9893798.1"
                     /translation="TSAAVGTALDRVLGPGQYTVVRTEAVGPKVGGELRTQAIWLVLL
                     SFVAVLIYLAFRFEWRFGVAAVVATVHDLVSAFALIGILRIEVSLFVVGALLSIVGYS
                     LNDKIVVLDRVRENLRKHMRDNFAALLNRSINETLPRTVFTGSTALGSLIALAVLGGD
                     VVRGFALVMLYGVIIGTFSSIFIAAPVLHWIEQRWPGAAVKQLRVPTKQPPTPTSGPA
                     GRKTQPVA"
BASE COUNT          606 a         1355 c         1286 g          609 t
ORIGIN      
        1 ctccgtcgcg gttttgaaga ccggccagac caccaggccc gatccgcccc ctcaagctgg
       61 tcacgagtcc ccgctccgtc cggctacgga tttcggaacg cgacacaatc gatttcgacc
      121 cggactcccc ggggcagacc ggccgccgcg acggtggatc gcgccggccg atgttgcccg
      181 aagtagttcg tgtagacctc gttcatcgcg gcgaagtcgg ccatgtcggc cagaaagacc
      241 gtggtcttga gcacccggtc caggccggat ccggcggcct ccagcactgc ccgcaggttc
      301 tgaagcaccc gatcggtctg ttccgctatc ccgcccggca ccacgtccat cgacaccgga
      361 tcgagcgcga tctgccccgc cgtgaatacc agctcgctcc aggtggtagc ctggctgtag
      421 ggaccgatgg ctttcggcgc gcggtcggtg tggattgttc caatcatgtc aagtcctggg
      481 gtctggttgt cgttccgggt tccccgttcc gggttccagg tgcggtgctg ggtgcggtgc
      541 taggtgccag gtgctgcgtg ctggacctga cccaccgctg tcatcctggg cgcagcgttc
      601 gtcatcctga gcgcagcgaa ggatcttagc tggcacctgg caccgcacac agcaccgcac
      661 tctgcacccg gaacggggaa ccgggaacgc ctcgggttaa aacaacccct caatcgtgcc
      721 atccgcatgg accttcattg cttcggccgc cggggtcttg ctcagccccg gcatggtcat
      781 gatgtcgccg gccaacgcga ccacgaagcc ggctccggcc gagggataca cgtcccggat
      841 ggtaatgcga aagccgcgcg gacgccccag gcgggtggga tcatcactga acgagtattg
      901 ggtcttggcg atgcacaccg gggtgtgacc cagcgccatc gcctcgcatt gggcgatggc
      961 ccgctgcgcc gcgggcagga gatcgacccc atcggcgccg tagatctcgc gggcgatggt
     1021 atcgatcttg gctgcgatgg gctggtcggt gtcgtagagc ggtttgaaag ccgccttccc
     1081 ttcctccagc agggcgagta actcccgcgc gacggcctca ccgccctcgc cgcctttggc
     1141 ccacacctcc gacaccgccg cccggatccc ccagcgggcg caggcctcga gcaccccgtc
     1201 gatctcttcc ggcgcgtcgc tcacgaaccg attcagcgcc accaccacgg gtaccccgaa
     1261 tttacccacg ttggtcacgt gggcctcgag gttggccagg ccccgttcca gggctgggac
     1321 atcgggagtg cctaacgcgg tcttgttgac gccgccgtgc atcttgaggg cgcgcaccgt
     1381 ggcgaccacc acggccgcct cgggctggag cccgcccatg cggcacttga tgtcgaagaa
     1441 cttctcggcc cccagatcgg ccccgaatcc cgcctcggtg agcacgatgt cggccaggga
     1501 gagccccagc cgggtcgccg ccagcgaatt gcagccgtgc gcgatattgc cgaacggtcc
     1561 gccgtgcacc agggccggac cgccttcgag ggtctggacc aggttcggca gcagcgcgtc
     1621 cttgagcagc agggtcatcg cgccggccgc cttgagatcg tgtgccgtca ccggcttccg
     1681 gtcccgggtg aggcccacaa tgatccggcc gcagcgggct tcgagatcgg gcaggtcggc
     1741 ggccaggcag agaatggcca tgacctccga gccggggatg atgacccagc gctcttcccg
     1801 ggtgggaccg ccgttgaggc cgcccaggcc caccaccgcc gagcgcaggg cccgatcgtt
     1861 catgtcgatg gtccggggcc aggtgatccg gcgcgagtcg atgcctaacg cgtttccctg
     1921 gtgcagatgg ttgtccagca gggcggaaag gaggttgtgg gccgagctga tggcgtgaaa
     1981 gtcgccggtg aaatggagat tgatctcgtc catcggcacc acctgggcgt atcccccgcc
     2041 ggctgcgccg cccttcaccc cgaagaccgg tcccagcgac ggctcgcgga tgcacaccat
     2101 cgccttcttc cccagccgcc ggaaggcctg gctcacgccc accgtgacgg tagacttccc
     2161 ctccccggcg ggcgtgggat tgatccccgt caccagcacc agccggccgc gcggagcgcg
     2221 gccggccacc gcagccgctg tgactttggc tttgtaccgg ccgtagggga gaaactcctc
     2281 ggggcccaga ccggcgtcgg cggccacctc gctgatgggg cgcagcgtgg cggcctgggc
     2341 gatggcgata tcgctgggaa ccggtatcgt tgcactcatg gggttggtcg ctcgtcgcta
     2401 gtcccggcca gccgggttcc gaagacccgg acggcgtttg ctccggtctg ggccatgcag
     2461 gcctcgatct ccagtcccac caccgccgcc agccgttccg ccgtagcccg gacgaaggcc
     2521 ggctcgttgc gtttgccgcg gtgcggcacc ggcgccaggt agggcgcgtc ggtttcgacc
     2581 agcagccggt cgagcggcac ctcgcgcatc aggccatcca gctgccagtt gcggaacgtg
     2641 atcatgccgc tccacgagac gtaatggccc agcgcaaccg cggcccgaag caggtccggg
     2701 ccgctcgaaa acgaatggag aatggccatc gcgccgggct ggtttcgcag cacgctgatg
     2761 atatccgggt cggcctctcg agcatggatg atcgcgggcc ggcccagcgt cgccgccagt
     2821 tgcagctggg cctcgaaggc cttcaactgg aggtcccggg gcgagaaatc atagtgatag
     2881 tcgagcccgg tctcgcccac cgccaccacc acgggatcgg tcagtgcctg ggccagccac
     2941 gtggcggtgt cgttgctcca ggccttggcc tcgtggggat gaagccccgc cgtggccgac
     3001 acgcccggca cccgcagggc cagtccgatg gcctgacggg cccgctccgg ggtttcgccc
     3061 accaccacca cgtgccatac gcccgcggcc cggctccggg ccagtaccgc gtcgcggtcg
     3121 gcgtcgaacg ccggatcggc cagatggcag tgggtgtcga ccagcacggc cggtcaggcg
     3181 accggctggg tcttccgccc cgcgggcccc gacgtcgggg tgggaggctg tttggtcggc
     3241 acccggagct gtttcaccgc cgcccccggc caccgctgct cgatccagtg caggacgggc
     3301 gccgcgatga agatggagga gaaggtgccg atgatcacgc cgtacagcat caccagggca
     3361 aacccccgca ccacatcgcc gcccagcacc gccagcgcga tcaagctgcc caacgccgtg
     3421 ctgccggtga acacggttcg cggcagggtc tcgttgatgg accggttgag cagcgcggcg
     3481 aaattgtccc gcatgtgctt gcggagattc tcccgcaccc ggtcgagcac cacgatcttg
     3541 tcgttgagcg agtagcccac gatcgacaac agcgcgccga ccacgaagag gctcacttcg
     3601 atccgcagga tgccgatgag ggcgaaggcc gagaccaggt cgtggaccgt cgcgaccacg
     3661 gcggccacgc cgaagcgcca ttcgaaccgg aaggccaggt agatcagcac cgcgacgaac
     3721 gagagcagca ccagccagat ggcctgggtg cgaagctcgc ccccgacctt ggggccgacc
     3781 gcttcggtcc ggacgacggt gtactggccc gggcccagca cccggtccag cgcggtgccg
     3841 accgcggcgc tggtcg
//
LOCUS       DASWKS010000265         8364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2369012, whole genome shotgun sequence.
ACCESSION   DASWKS010000265 DASWKS010000000
VERSION     DASWKS010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8364
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2369012"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VGA78_07730"
     CDS             complement(<1..199)
                     /locus_tag="VGA78_07730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893799.1"
                     /translation="MTTRATLRLASTLLLGLPAVPATAQTPPVTEARLDTRRAQASRR
                     ELEASLAQIDTILKSPGYSSRI"
     gene            532..1425
                     /locus_tag="VGA78_07735"
     CDS             532..1425
                     /locus_tag="VGA78_07735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9893800.1"
                     /translation="MSTDGHTVRSVQRILIANDQEWTARSLESILAAEGYEVIRAFTG
                     NQAFERALDSQPDLIVLDTQLPDISGPEVCRRLRAHPAIGWAVPIILTTAGSNGRSRM
                     LEAMEAGAWDFATQPFDGPMLLARIRTYLKAKAVYDAARAESTLDQGTGIYNRRGLAR
                     RLTEVWADARRRREPVTCLVISANAPEIAPALDRADTIASAVVRALRACVRGSDAMGR
                     LSPLDFAVMAPSLDRDGALLVLDRFQNHLHAIRAEGGISVRAGIATIEPVEGANADQL
                     LQRAATAVDWAATERPLAVNE"
     gene            complement(1486..3864)
                     /locus_tag="VGA78_07740"
     CDS             complement(1486..3864)
                     /locus_tag="VGA78_07740"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HEX9893801.1"
                     /translation="MATSITPITPQPLGSPGGPRLPYLPSETGLGPAGEQGLNLSRLF
                     QSLKRFKWLILGATAVGLGGGMLATRYVSPSYQVGATIWIEAPTDDRDGGAPIQGERL
                     LRSRAWVDLLRTYVVLDPVVRERRLYLTAQRGSDSSLFRSFDLESRFLPGEYEFSVDN
                     AGRTWTLKHRKYLVTEQGGVGDSVGRKMGFKWAPRPARAAYGRTIRFTVSTPREASER
                     LNNRLTTDLREETFLTIRYSDPSPDEAAGTLNALVTRYVDEAARQKKAKLTLLAAVLD
                     SQVTEQAERLRMAEENLESFRVGTITLPREDQPQIAAGLQSTQPTVYNQYYQLRTQRD
                     EIRRDRREIEEVLGKLTKGTTTVDAFHTIPAVRGAPDLQRVLTEFSTAESQLRTMLQR
                     YTEEYKGVKDLREQINNLRDRTIPLYAQALARQLQNQDDEMSDRISASEREMRLIPSR
                     AQNESRLRREMDQADNLFRSLSTSKQEARLAEASAIPDVRIVDSAEVPTEPSKNSTAS
                     LVLIGFVAGLGLGIGLALLLDRLDHRVRYPEQVSQGLGLSILGTIPQIRHHGASPEEA
                     AQVIEAFRSVRLNLMHSYDQGSVVALAVSSPSPGDGKSLISSNLALSFAEAGYRTVLV
                     DGDIRRGDLHRTFGVERRPGLLDHLSGEADPTAILRPTTHVNLMVVPCGTRRRQGPEL
                     LGSARMQDFINVLRGRFEVIIIDTPPLGAGIDPFVLGTATGNLALVLRAGETDRQLAE
                     AKLQVLDRLPIRMLGAILNDVRVGEGAYKYYAYSYGYVAGDEDVAELPPIKR"
     gene            4209..5741
                     /locus_tag="VGA78_07745"
     CDS             4209..5741
                     /locus_tag="VGA78_07745"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9893802.1"
                     /translation="MGISHLRESDPPAAPPSSPRDPLAIPADVKASIKILLVDDDRSL
                     RESCASVLQMDGYSVTLAGRGEEALELVRRRKFDIILVDLYMSQVSGLELLRAALDTN
                     RDTIVVVMTGNPSVTTSIEALRAGAWDYLPKPFSATHLQVLIGRASHAVMVNREASDL
                     RLQVLQQTTQGEAGGAPLIGISPLFRKAVELARKVAATDASVFITGESGTGKEVIAQF
                     IHAHSRRTKKQLVAINCAALPEPLLESEMFGHRKGSFTGADRDKPGLLETANGGTLFL
                     DELTEMSLPLQAKLLRVIQDGVVRRVGSEQPDAVVDVRFVSATNRDPQQAVQSGILRG
                     DLFYRLRVVPIHLPPLRKRPEDISLLANHFLSHYWRHHRQTPDRTPRLSDAAIAFLRS
                     RPWKGNVRELQNVIEHVAVLVDPDHVIEPDDIPIYEEGTGGDAPSDHVAPMLVPDEPY
                     HMAKDRIIAQFEKDYLTRLIARAGGNMSKAARLAKVDRTTLYRLMEKHSILREEDAGA
                     IE"
     gene            5738..6841
                     /locus_tag="VGA78_07750"
     CDS             5738..6841
                     /locus_tag="VGA78_07750"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9893803.1"
                     /translation="MTRSAPPARSVALEALAAAEQQVAAEPERLREDAAAPEEVARVA
                     AAISAEVRALSTGLAPAAQPLTPSALARRVLALLRGRFLERAARLEQVPSQTELLPIL
                     LAMEQVSERMVPAWDQRFADRLSGPDGLELVVEVAHDLRSPLTSILFLAETLLRGRSG
                     PVTTLQERQLGLIYSAAFGLSSVASDVVELVRGRDRLADLEPMPFSISDIFESVRDIV
                     RPIAEEKGLEVRLGFPSRPYRVGHPVALNRVLLNLVTNALKFTDEGMVELSAGEPNGL
                     GVEFAVRDTGRGIPPQAMTLLFEPFRRRQHDREYAFSGSGLGLSICRKFVEAMGSDLQ
                     VETELGKGTRFSFVLQLPGAEHAPSIHSLTHHY"
     gene            6949..8043
                     /gene="wecB"
                     /locus_tag="VGA78_07755"
     CDS             6949..8043
                     /gene="wecB"
                     /locus_tag="VGA78_07755"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX9893804.1"
                     /translation="MLLHVVGARPNFMKLAPVFLAGRGAPHLRQHVVHTGQHYDRDMS
                     DRFFEELGIPRPDENLDVGSGSHAQQTAAIMARIEPVLERVRPEWVVVYGDVNSTMAA
                     ALVAVKLGIRIAHVEAGLRSRDRTMPEEINRLVTDQLADLLLTPSRDADANLRAEGIP
                     ATRIAFVGNVMVDTLLRLRDQARALAVPERLGLNGKPFAFVTLHRPSNVDQADTLREM
                     LLALETVAQQMPVIFAVHPRTRSRIESFGLGGVAGSVTMLAPLGYLETISLAERSTLV
                     ITDSGGLQEETTVLGVPCLTARPNTERPVTVTEGTNRLVASTRNAVVAAVEELLAARS
                     RGAFVPRRPELWDGNAGTRIIQALVQRSAR"
     gene            8047..>8364
                     /locus_tag="VGA78_07760"
     CDS             8047..>8364
                     /locus_tag="VGA78_07760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893805.1"
                     /translation="MANFVAVLDPDADRRRAYVSELQSRIAPLPGLVTDRREVGQCAV
                     IWAAGPRAPVSVESSLNRLGLIWGDAIPGPGPTRLTASGLLREWLDQPEPFPTFDGYF
                     AALV"
BASE COUNT         1362 a         2770 c         2757 g         1475 t
ORIGIN      
        1 ggatccggga gctgtaaccc ggagacttga ggatcgtgtc gatctgagcg aggctggctt
       61 caagttcccg gcgcgacgcc tgggcccggc gggtatccaa acgggcttcg gtgaccggtg
      121 gtgtctgggc tgtggccggt actgccggta atcccaggag cagagtgctc gccagtcgga
      181 gggtcgcccg cgtagtcatg gccaagccta gtctcccgag aggtcggacg tccagtcgca
      241 cgaatagcat gctagccaag gctgcggccg tcttcggcct cagtgcaact cccaggccgt
      301 cactggtcgt atcagaccac ccacatcatt gtgggacata gcgttgggtg aggttattgc
      361 attgtcacgg ccagggtggc ccgtctatcg ctctgcatta gagccggatg gctgccgggg
      421 tcaactgcat aacttcttgc cggcgaatgc gttcgagtgg atcagcggaa ggcggagatc
      481 actccttgat gtcttgtttc cggtccgtac ctgttgctca cagacatcgt catgtcgact
      541 gatggccaca ccgtgcggtc agtgcagcga attctgattg cgaacgatca ggaatggacc
      601 gcgcgaagcc tggagagcat cctggccgct gaaggctacg aggtcatccg ggcgtttacc
      661 ggtaaccagg ccttcgaacg ggctctcgac tcgcagcccg atctgatcgt gctcgacacc
      721 caactccccg acatcagcgg ccccgaagtg tgccgtcggc tgcgggcgca ccccgcaatc
      781 ggttgggcgg ttcccatcat cctcacgacc gcgggttcca acggccgctc ccgaatgctc
      841 gaagcgatgg aagccggggc gtgggatttc gcgacccagc ccttcgatgg accgatgctg
      901 ctggcgcgca tccgcaccta tctcaaggcc aaggccgtct acgatgccgc acgggccgag
      961 tcgaccctcg accagggcac tgggatctac aatcgacggg gactggcccg gcgactcacc
     1021 gaggtctggg ccgacgcccg acggcgacgc gagccggtca cctgcctggt gatctcggcg
     1081 aatgcgcccg agatcgcgcc ggcactggac cgagcggaca ccatcgcctc ggcagtagtc
     1141 cgggccctcc gtgcctgcgt ccgcggctcc gatgccatgg ggcgattgtc tcccctcgat
     1201 ttcgcggtga tggcccccag tctggaccgc gacggtgccc tcctggtatt ggaccggttc
     1261 cagaaccatc tccatgcgat tcgggccgaa ggtgggattt cggtgcgcgc cgggatcgcg
     1321 actatcgagc cggtggaggg cgcgaacgcc gatcagctgc tgcagcgggc cgccaccgcg
     1381 gtcgattggg cggcgaccga gcgtcccctg gccgtaaacg aataaagtcg aagaggcgat
     1441 ttccctctcc gacttcgttc gtcctcttcc gactcaggtc actattcagc gtttgatcgg
     1501 cggtaactcc gcgacgtcct cgtcgccggc cacgtagccg tagctgtagg cgtagtactt
     1561 gtacgcaccc tcgcccaccc gcacgtcatt gagaatcgcc cccagcatcc ggatcggcag
     1621 ccggtcgagc acctgcagct tggcttccgc gagctggcga tcggtttcgc cggcccggag
     1681 caccagtgcc aggttgccgg tggcggtgcc cagcacgaag ggatcgatcc cggcgccgag
     1741 cgggggggta tcgatgatga tgacctcgaa ccggccgcgc aggacgttga tgaaatcctg
     1801 catccgggcg ctcccgagca gctccggccc ttgtcgacgg cgggtgccgc agggaaccac
     1861 catcaggttg acatgggtgg tgggccggag aatcgccgtg ggatcggcct cgcccgacag
     1921 gtggtcgagc agcccgggcc ggcgctcgac gccgaaggtc cggtgcaggt cgccccgccg
     1981 gatgtcgccg tcaaccagca ccgtgcgata gccggcctcg gcgaacgaga gggccaggtt
     2041 ggaggaaatc agggacttgc cgtcgcccgg cgacggactc gagaccgcca gcgccaccac
     2101 cgatccctga tcgtacgagt gcatcaggtt gaggcggacc gatcggaatg cctcgatgac
     2161 ctgggccgcc tcttccggcg aggcgccatg gtgccggatc tgagggatgg ttcccagaat
     2221 cgagagcccc aatccctggg agacctgctc cgggtagcgg acccggtggt ccagccggtc
     2281 gagcagcaac gccagcccga tgccgagtcc cagtcccgcg acgaagccga tgagcaccag
     2341 actggccgtg ctgttcttgc tgggctcggt ggggacctca gcgctgtcca cgatgcggac
     2401 gtcgggaatg gcgctggctt ccgctagacg agcctcctgc ttcgacgtgc tgaggctgcg
     2461 gaagagattg tcggcctggt ccatctcgcg gcggagccgg gattcgttct gcgcccggct
     2521 ggggatcagc cgcatctccc gttcgctggc ggaaatgcgg tcggacatct catcgtcctg
     2581 attctggagc tgccgcgcca gggcctgggc gtagagcgga atggtgcgat cgcggagatt
     2641 gttgatctgc tcccgcagat ccttcactcc cttgtattcc tcggtatagc gctgcagcat
     2701 ggtccgcagc tgcgactcgg cggtcgagaa ttccgtcaag acccgttgca ggtccggagc
     2761 gccgcgtacg gcgggaatgg tgtggaaggc gtcgaccgtg gtggtgccct tggtcaactt
     2821 ccccaacacc tcttcgattt cccgccgatc gcgccggatc tcatcgcgct gggtgcggag
     2881 ctggtagtac tggttgtaga ccgttggttg ggtcgactgc aacccggccg cgatctgggg
     2941 ctggtcttcc cgcggcaggg tgatggtgcc cacccggaag gactccaggt tctcctccgc
     3001 catccgaagc cgttcggcct gctcggtcac ctgggaatcg agcaccgccg ccagcagcgt
     3061 gagcttggcc ttcttctgcc gcgcggcctc gtccacgtag cgggtcacca gggcattcag
     3121 cgttccggct gcttcgtccg gagacggatc ggagtaccga atcgtgagga aggtctcttc
     3181 ccgaaggtcc gtcgtcaggc gattgttgag ccgttccgag gcttcccgcg gggtgctgac
     3241 ggtgaagcga atggtgcgcc cgtaggccgc gcgggccgga cggggggccc acttgaatcc
     3301 catcttgcgg cccaccgagt cgcccactcc cccctgctca gtgaccaggt acttgcggtg
     3361 tttgagggtc caggtccggc cggcgttgtc cacgctgaac tcgtattcgc cgggcagaaa
     3421 gcgggactcc agatcgaaac tgcgaaatag actggagtcg gacccccgtt gggcagtgag
     3481 gtagagccgc cgttcccgga ccaccggatc caggaccaca taggtgcgga gcagatcgac
     3541 ccaggcgcgg gatcggagca atcgttcccc ttgaatgggc gccccgccgt cccggtcgtc
     3601 ggttggggct tcaatccaga tggttgctcc cacctggtag gacgggctca cgtagcgggt
     3661 ggccagcatc cccccgccca ggccgacagc cgtcgcgccc aggatcagcc atttgaagcg
     3721 tttgagggac tgaaacagcc gggacaggtt cagtccttgt tcgccggccg gtcccaatcc
     3781 cgtttccgag gggaggtaag gaagcctggg cccaccgggg gatcccagcg gctggggagt
     3841 gatgggggta atcgaagttg ccatatccga cgactcgtct cgtcattcga gttagattcg
     3901 gtcgaccaat attgctctgc taaataatca cgttcacccg agtgaacctc gcaccaggga
     3961 tggcgaaacg ccatcacccg gtgcaagtgc gataccgcac ctggacacag ggacgaaagt
     4021 ccgcagttgc ggctatccat cgaatatgta gtatctttgc tacgctggag gtggttgtca
     4081 cgcgaatcca ccgtgtcggg aagccgtcac tctgtgacaa accccggtac cgggcacagt
     4141 tttcgcttct tttctgctcc gctgattcaa cagtcgttgg tttcgtaagc aacacagtct
     4201 ggaaggacat gggcatctcg cacctcagag agtctgaccc gccggccgcg ccgccgtcgt
     4261 ccccacggga cccgctggcg attccggccg acgtcaaagc cagcatcaag atcctgctgg
     4321 tggacgacga ccgtagcctc cgggaaagct gcgcgagcgt gctccagatg gacggctaca
     4381 gtgtgacgct ggccgggcgg ggcgaggaag ccttggagct ggtccggcgc cgcaagttcg
     4441 acatcatcct ggtcgatctc tacatgtcgc aagtctcggg tctggagctg ctgcgcgcgg
     4501 cgctcgacac caaccgcgac accatcgtgg tggtgatgac cggcaatccc agcgtcacca
     4561 ccagcatcga agccctgcgg gccggcgcct gggactatct gcccaagccg ttctccgcca
     4621 cccatctcca ggtcctgatc ggccgggcct cgcacgcggt catggtgaac cgcgaggcgt
     4681 cggacctgcg gctccaggta ctgcagcaga ccacccaggg cgaagcgggc ggggccccgc
     4741 tcatcgggat ttcgcccttg ttccgcaagg cggtcgagct ggcccgcaag gtcgcggcga
     4801 ccgacgcctc ggtcttcatc accggtgaat cggggaccgg caaggaagtc attgcgcagt
     4861 tcattcacgc ccacagccgg cgcaccaaaa agcagctggt ggccatcaac tgtgccgcgt
     4921 tgccggagcc tctgctcgag tccgaaatgt tcggccaccg gaagggttcg tttaccggcg
     4981 ccgatcgcga caagcctggt ctgctggaaa ccgccaacgg cgggaccctg ttcctggacg
     5041 agctgacgga gatgtccctg ccgctccagg ccaagctgtt gcgcgtgatt caggacggcg
     5101 tggtccgccg ggtcggctcg gagcaacccg acgcggtggt ggacgtgcgg ttcgtctccg
     5161 ccaccaaccg cgatccccag caggcggtcc agagcggcat cctgcggggc gacctgttct
     5221 accgcctgcg ggtggtgccg atccacctgc cgccgctccg caagcgcccg gaagacattt
     5281 ccctgctcgc caaccatttc ctgagccact actggcggca ccaccgccag acgcccgacc
     5341 ggaccccgcg gctgtcggat gcggccattg cgtttctgcg gtcgcggccc tggaagggca
     5401 acgtgcggga gctgcagaac gtcatcgagc acgtggcggt gctggtcgat ccggaccacg
     5461 tcatcgagcc ggacgacatt ccgatctacg aagagggcac cggcggcgat gccccgagcg
     5521 atcacgtggc cccgatgctg gttccggacg agccctatca tatggccaag gaccggatca
     5581 ttgcccagtt cgagaaggac tatctcaccc ggctcatcgc ccgcgccggc gggaacatgt
     5641 ccaaggccgc gcggctggcg aaggtcgacc gcaccacgct ttaccgcctc atggagaagc
     5701 acagcatcct ccgggaggag gacgccgggg cgatcgaatg acccgttcgg cgccccccgc
     5761 ccgatccgtc gctctggaag cactggccgc ggcggagcag caggtggccg ccgagccgga
     5821 acgcctacgg gaagacgcgg ccgcgccgga agaagtcgcg cgggtggccg ccgccatctc
     5881 ggccgaagtc cgggccctct caaccggcct cgcgcccgcc gcccagcccc tgacgccatc
     5941 ggccctggcg cgccgagtcc tggcgctgct ccggggccgg ttcctggagc gagccgcccg
     6001 actggagcaa gtcccctccc agaccgaatt gctgcccatc ctcctcgcca tggagcaggt
     6061 gtccgaacgc atggtgccgg cctgggacca gcgttttgcc gaccggctgt ccgggcccga
     6121 cgggctggag ctggtggtcg aagtcgccca cgatctgcgc tcgcccctga cgtcgatcct
     6181 gttcctggcg gagaccctgc tccgggggcg ttcggggccg gtgaccaccc tgcaggagcg
     6241 gcagctggga ctgatctaca gcgcggcctt cggtctgagt tccgtcgcga gcgacgtggt
     6301 ggagctggtc cgcggccgcg accggctggc cgatctggaa ccgatgccct tttccatctc
     6361 ggatatcttc gaatcggtgc gggatatcgt ccggcccatc gcggaagaga agggtctgga
     6421 agtgcggctg ggttttccat cgcgccccta ccgggtgggt cacccggtgg cgctcaaccg
     6481 ggtgctgctc aatctggtca ccaacgcgct caagttcacc gatgagggca tggtggagct
     6541 ctccgccggc gagcccaacg gtctcggggt cgagttcgcg gtgcgcgaca ccgggcgggg
     6601 gatcccgcct caggccatga ccctgctctt cgagccgttc cggcggcgcc agcacgaccg
     6661 cgaatacgcc ttctccgggt ccggtctcgg cctctcgatc tgccgcaagt tcgtggaggc
     6721 gatgggatcg gatcttcaag tggaaaccga gctcgggaag gggacccggt tttccttcgt
     6781 gctccagctg cccggggccg aacatgcgcc cagcatccac tcactgacac accactactg
     6841 acaggactca ggactcagga ctcaggacta agtcgtccat gccccggtct tgtaacggtc
     6901 cctgggttcc tccttatgct tagtccttag tcccaagtcc taagtcctat gcttttacac
     6961 gtcgtcgggg ctcggcccaa cttcatgaaa ctcgcgccgg tattcctggc gggacggggc
     7021 gcgccccacc tgcggcagca cgtggtccat accggccagc actacgatcg cgatatgagc
     7081 gaccggttct tcgaagagtt gggcatcccc cgtcccgatg agaatctcga cgtgggatcc
     7141 ggctcgcacg cccagcagac cgcggcgatc atggcgcgca tcgagccggt gctggagcgg
     7201 gtccggcccg agtgggtcgt ggtctacggc gacgtcaatt cgacgatggc tgcggcgctg
     7261 gtggcggtga agctgggcat ccggattgcc cacgtggagg ccgggttgcg cagccgggac
     7321 cggaccatgc ctgaagagat caaccgcctg gtcaccgatc agctggcgga cctgctgctc
     7381 acgcccagtc gagacgccga tgccaacctt cgggcggaag ggatccccgc cacccggatc
     7441 gccttcgtcg gaaacgtgat ggtggacacc ctgctccgac tgcgggacca ggcccgtgcc
     7501 ctggcggtgc cggaacgatt gggactgaat gggaagccct tcgccttcgt tacgctccac
     7561 cgcccttcca acgtggacca ggccgatacc ctgagagaga tgctcctggc gctggagacg
     7621 gtcgcccagc agatgccggt gatcttcgcg gtccatcccc gaacccggag ccggatcgaa
     7681 agcttcggcc tcgggggagt ggccggctcg gtcacgatgc tggccccgct cggctacctg
     7741 gagaccatca gcctggccga gcgaagcacg ctggtcatca cggactcggg cggcctgcaa
     7801 gaagagacca cggtgctggg tgtaccctgt ctcaccgccc ggcccaatac cgagcgaccg
     7861 gtcaccgtga ccgaggggac caaccggctg gtggcctcga cccggaatgc cgttgtcgcg
     7921 gcggtcgaag agttgctggc cgcgcgctcc cggggcgcgt tcgttccccg ccgcccggaa
     7981 ctgtgggatg ggaacgccgg cacccggatc atccaggccc tggtccagcg ctcggcccga
     8041 taaggcatgg ccaatttcgt cgcggtgctc gatccggacg ccgaccgtcg ccgggcgtac
     8101 gtcagcgagc tgcagtcccg gatcgcaccc ctgcccggtc tggtgacgga tcggcgagag
     8161 gtcgggcagt gtgccgtcat ctgggctgct ggaccgcggg ccccggtttc ggtggagtcc
     8221 agcctcaacc ggctcggtct gatctggggc gacgccatcc ccgggcccgg tcctacccgg
     8281 ctcacggcga gtggtctgct tcgcgaatgg ctcgatcagc cggagccttt cccgaccttt
     8341 gacggctact tcgccgcctt ggtg
//
LOCUS       DASWKS010000266         2404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3441646, whole genome shotgun sequence.
ACCESSION   DASWKS010000266 DASWKS010000000
VERSION     DASWKS010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3441646"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VGA78_07765"
     CDS             <1..434
                     /locus_tag="VGA78_07765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893806.1"
                     /translation="GTRGTGGQGGGASIALLSLASDITIEDSELVAATGGDGGNGGVG
                     GDAGLGQTGATGGAGNAGFSIRNGGQGGPGGNGGPGGSGSGGTGGPSIALAYSGAEPG
                     VDDDTALMPGEGGIAGDGGTVGAVSAPNGSEGVAEAMLEVE"
     gene            1472..>2404
                     /locus_tag="VGA78_07770"
     CDS             1472..>2404
                     /locus_tag="VGA78_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893807.1"
                     /translation="MNNPIKRQANNGQTSEREQSSRRRRRNAHASHRQSLFALWLAMA
                     AIFFGCGDTSSNESNTDEPVARVEQALTTEQLRILNMNGAIGTGPNIDWSAVSGTATS
                     STIAAEGGKAIKLSANGSWNPAVVSRPLSSLGPIGTTATVKVRLAGNYVAQGSWYGQL
                     AMFLNAPSRGIFNQYVGPVALSGPLGTWKEYSLPLPASITSALSDATDLTIRLEINGS
                     SPNNVIYLDQLSFGTPSGATSTGAGGTTSGSGSTTTGSGGTTSTNARILGAEDPVNDW
                     TPFEPGAVVTRETLHTEGSFSMSVDGSGWTPVVSA"
BASE COUNT          471 a          766 c          807 g          360 t
ORIGIN      
        1 gagggacgcg aggtaccggc ggccagggtg gcggcgcgtc gatcgcgctg ctcagcttgg
       61 cgagcgacat caccatcgaa gacagcgagc tcgtggcggc gacgggcggt gatggaggga
      121 atggcggtgt tggtggagac gcggggctcg gtcaaactgg tgcgactgga ggcgcgggca
      181 acgcaggctt ctcgatccgc aacggtggtc agggtggtcc ggggggcaac ggcgggcccg
      241 gcggctcggg ctcgggcggc accggcggcc cttcgatcgc gctcgcgtat tccggagcgg
      301 agcccggagt cgatgacgac accgcgctga tgcccggcga aggcggcatc gcaggcgatg
      361 gcggcacggt gggagccgtg agcgccccga atggaagcga aggcgtggcc gaagcgatgc
      421 tggaagtcga gtagcgccgc caagacgccg agggcgtcag gatgccaagg ggttcttgga
      481 gtggagaatc gcgggccgag caccgctact cacgacgcgg ctggccgata gggaagagtc
      541 gggctcacgc cgacactcgc gccgcgccgc ctcgcttccc tctttccctg gccgcgtccg
      601 ggtgactccg tgggcccggc gttgcctcac ctgaaagcgc ggcgcggcga agaaaaatca
      661 aaaatcgaca tcgcgagccg ctactgggaa cgcgactgac cgacaaggta agagccgggc
      721 acgcctttgg ccccaccacc cccggcgcgc tcggcgtccc tccattcccg ccgagggccc
      781 gcagccgagg tgtgcccggc gcttgacggc tccacgcgca tcagtccccc aagccgcgat
      841 catgaccccc agcgtcacct ccgacacacg agcgcacccc gcaagacacc ttgcggcgct
      901 cctcgcctgt ggcgtgcgcc catttccgtt ttgatttcgc cgccgaacca cattggcgcg
      961 aggtatgcat tcccatcgcg acaggacact cggaacttcc cgcggcgcga cgagtcgaag
     1021 aaacttcacg atccgatcag attggggctt cccaagcgcc aaagaatgtg atttaaaggc
     1081 gatgggtgtt ggtcgtgggc ttgaacccct cacgttgtgg aagccggaaa ttaacctagg
     1141 gttcatgagg taggctcgaa cacgaacttc tgaacaacag agccagggac aaccaacacc
     1201 cacacgttgg gcccaccggc ctcggggaat agtcgtagag cgtgcgcact cggcgcagaa
     1261 cgtcgagcgc gtgctatttg cgacgcaact cactcgggcc agggccgatc gcggcgggta
     1321 gaccaacagg gcttgattca tcgagcggcc gcgcccggca tcggcgcgtg gccaacagag
     1381 gacttgcggc cagcgctctc gagcgctcgg gcagcgttgc ggagttttgc gcctttcgaa
     1441 tgtacgcctt tcgatcggga gcgggtaaac catgaacaat ccaatcaaac gacaggcaaa
     1501 caacgggcaa acgagcgagc gggagcagag cagccggcgc cggcgccgta acgctcacgc
     1561 gagccatcgc caaagcctgt tcgccctgtg gctcgccatg gcggccatct tcttcggctg
     1621 cggcgacacc tcgagcaacg agagcaacac cgatgaaccg gtcgctcggg tggagcaggc
     1681 actcacgaca gagcagctca ggatcctgaa catgaacggg gccataggca ccggcccgaa
     1741 catcgattgg tcggccgttt caggcaccgc aacgtcgagc acgattgccg ccgagggggg
     1801 aaaagccatc aagctgagcg ccaatgggtc atggaatccg gctgtggtga gccgccccct
     1861 gtccagcctc ggccccatcg gaacgacggc gaccgtgaag gtacgactag caggaaatta
     1921 cgtggcgcaa ggtagttggt atggccagct cgcaatgttc ctcaatgctc cttcacgagg
     1981 cattttcaat caatacgtag gtcccgttgc actctcaggc cccctcggca cctggaagga
     2041 atacagttta ccgcttcccg cgagcatcac gagcgccctg tccgacgcca cggacttgac
     2101 gattcggctg gagatcaacg gctcttcgcc caacaacgtg atctacctcg atcagctctc
     2161 cttcggcacc ccgagcggcg cgacgagcac gggagcgggc ggcacgacga gcggctcggg
     2221 cagcacgacg acgggctcgg gcggaacgac gagcaccaat gccaggatcc tcggcgcgga
     2281 agacccagtg aacgactgga ccccgttcga gccgggcgcc gtggtgaccc gggagacgct
     2341 gcacaccgag gggtcgttct cgatgtccgt ggatgggagc ggctggacac cggtcgtgtc
     2401 ggcg
//
LOCUS       DASWKS010000267         4064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1623619, whole genome shotgun sequence.
ACCESSION   DASWKS010000267 DASWKS010000000
VERSION     DASWKS010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623619"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VGA78_07775"
     CDS             complement(<1..407)
                     /locus_tag="VGA78_07775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893808.1"
                     /translation="MTSPTPVPPPETPGTPALPRDLVLFFVQFSVALNKARAYPAGHP
                     VLAAAINVLVQHINAIFQRRQLLTIGVSQTQLVVDGVASDEDHPVLKDLAERMHRHQL
                     AAVQLRPGLQGEELASLLQTMALESWRQGKPLGL"
     gene            593..1297
                     /locus_tag="VGA78_07780"
     CDS             593..1297
                     /locus_tag="VGA78_07780"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX9893809.1"
                     /translation="MSMRVLPGMSGFAYKEWKGLFYPEDVAHGDMLGYYATQFPVVEI
                     NSTFYRMPSEKVLLDWAGQVPEGFSFCIKGSRRITHNNRLQDVQSLVEYLLQTVSVLG
                     GKRGPLLFQIPPTFKKDLPRLEAFLQLMPRNLRVALECRHTSWFDEEVSALLRTRSVA
                     LVVAEQEDWLTPIIPTAPWGYLRLHRPGYTDDALRTWLEQIRAQPWTEAYVFFQHEEE
                     IAGPEIGVRFRDLAGA"
     gene            1334..1975
                     /locus_tag="VGA78_07785"
     CDS             1334..1975
                     /locus_tag="VGA78_07785"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9893810.1"
                     /translation="MPGTAPDSAPPMRPWHDLGSTIPRRGNPVTTWLARGVMRLCGWR
                     MTGSLPDLPRMVMTAAPHTSNWDFLVGVGAMYAAGFQVSFLGKHTLFRPPLGWVMRWL
                     GGRPVDRASTRGMVAETVAQIQASDRFILALAPEGTRKRVTQWRTGFWRVAKEAGLPI
                     VLGFFDYGTRTVGFGPIIWPNQLDADMKTIQDFYRTKQARRPELFGTPENSEQ"
     gene            2161..2718
                     /gene="efp"
                     /locus_tag="VGA78_07790"
     CDS             2161..2718
                     /gene="efp"
                     /locus_tag="VGA78_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX9893811.1"
                     /translation="MKASDIRRGTVLIYEGQPCRVMEFQHRTPGNLRAFVQVRMRNLN
                     TGNTFETRFSATELVQDARLDTKELQVLYKDVNGTHVMDAATYDQYSLDDEVVGDLAD
                     WMEPGMTFIAEWLEGKPIALQLPSVIELEIVETAPLMKTATKTASTKPARLSNGVTVQ
                     VPEFINSGERVRVNPNTGEYLERAK"
     gene            complement(2792..>4064)
                     /locus_tag="VGA78_07795"
     CDS             complement(2792..>4064)
                     /locus_tag="VGA78_07795"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX9893812.1"
                     /translation="AESVEALFDLAMGFGAQAAPASRRIAVVTNAGGPGIIAADAAEP
                     VGLELTELSAGTVERLQALFPEEASIQNPLDMIASATPDGYRTALSALLDDPQVDGVL
                     AIYVPIPPNSPAQVAESIAAAAKGMPSKPVFAVVMGHEGLPQGRAELHEAGIPAYLFP
                     ESAARALAARARYREWQERPLPQPHALKVDRDAARELLDQARREGRSRLTESAALELL
                     TAYGIPTARARFVRSVDEAVHAAAEAGFPVVLKVVAPGIVHKTEADGVQVDLRSADDV
                     RGAWDRIQAGAARVAPGAAVEGVVVQPMLRGGRELIIGMTRDPDFGPLVMFGLGGVLV
                     EVLGDVTFRIAPFGRADARDMVRGIRGVKLLDGVRGAPPVNLTAIEDALLRLAQLAID
                     FPEIAELDVNPLLATDVGVVAVDGRAMLIDD"
BASE COUNT          721 a         1337 c         1341 g          665 t
ORIGIN      
        1 agtcccagag gcttcccctg gcgccagctc tccagcgcca ttgtttgcag cagactggcc
       61 agctcctcgc cttggagtcc ggggcggagc tgcaccgcgg ccagctgatg ccggtgcatc
      121 cgctcggcca gatccttgag gaccgggtgg tcttcgtcgc tcgcgacgcc gtccaccacc
      181 agctgggtct ggctcactcc gatggtgagg agctggcggc gctggaagat cgcgttgatg
      241 tgctggacca gaacgtttat cgcggcggcc agcaccggat ggccggcggg ataggcgcgg
      301 gccttattga gggcaaccga gaactggacg aagaacagga ccaggtcccg gggcagagcg
      361 ggggtgccgg gagtttcggg aggcgggacc ggagtggggg aagtcacgcg ttaaggaaac
      421 cgtaacgcgt tgtccggcat ggggcaagtc aaaaccggtc gaaggggtcg aaggcggtcg
      481 aaggagtcga aggagtcgaa ggagtcgaaa gcatgattgg cgggctggga ccttcttcga
      541 ctatcttcga ccgcttcaac cgccttcgac ttgcttcgac cgccttcgac tgatgagtat
      601 gcgagtcctc cccggcatgt ccggcttcgc ctacaaggaa tggaaggggc tgttctatcc
      661 cgaggacgtc gcccacggcg acatgctggg atactatgcg acccagttcc cggtggtgga
      721 aatcaacagc actttctacc ggatgccctc cgagaaggtc ctgctcgact gggcggggca
      781 ggttcccgag ggattcagct tctgcatcaa gggctcccgc cgcatcaccc acaacaaccg
      841 gctgcaggat gtccagagcc tggtggagta tctgctccag accgtcagcg tcctgggcgg
      901 taagcggggg cctttgctgt tccagatccc gcccacgttc aagaaggacc tgcctcgtct
      961 cgaggcgttt ctccagctga tgccgaggaa cctgcgggtg gccctggaat gccgccatac
     1021 ctcatggttc gatgaggagg tgagcgcact gctccggacc cgttcggtcg cgctggtggt
     1081 agcggagcag gaggactggc tcaccccgat cattcccacc gcaccctggg gctacctgcg
     1141 gctccatcgc cccggttaca ccgacgacgc gctccggacc tggctcgaac agatcagggc
     1201 acagccttgg acagaggcct acgtattctt tcagcatgag gaagagatcg cggggccgga
     1261 gatcggggtg cggtttcggg acctggcggg cgcgtgactg ccttgatgat tgacgatcga
     1321 ccattgacaa ttgatgcccg gcaccgcgcc tgactccgcg ccgccgatgc ggccctggca
     1381 cgacctcggc tcgaccatcc ctcgccgagg gaaccccgtc accacctggc tggcccgtgg
     1441 cgtcatgcga ctctgcggct ggcgcatgac cggcagcctg cccgatctcc ccaggatggt
     1501 catgacggcg gcaccccaca cctccaactg ggatttcctg gtgggagtgg gcgcgatgta
     1561 cgccgcgggc ttccaggtct ctttcctcgg caagcacacc ctgttccgtc cacctcttgg
     1621 gtgggtcatg cgatggctgg gcgggcgccc ggtcgatcgg gcctcgaccc gcggcatggt
     1681 ggccgaaacc gtggcacaga tccaggcgag cgaccggttc atactggctc tggcaccgga
     1741 aggcacccgc aagcgcgtca cccaatggcg caccggattc tggcgggtcg ccaaggaggc
     1801 tgggctgccg atcgtgctcg gtttcttcga ttacggaacc aggacggtcg gattcggccc
     1861 gatcatctgg ccgaaccagc tggacgccga catgaagacc atccaggact tctatcgaac
     1921 caagcaagcg cgccgccccg agctgttcgg gacaccagag aacagtgagc agtgagcggt
     1981 gagcagtgag cagtgaaccg ggaacaggga gcagggagca gggagcaggg agcagggagc
     2041 agggaacggt gagccaagtt cactgtttac cgttcaccgt atcctgttca ctgggccctg
     2101 ttcaccgttt accgctcacc gtggttatgt ttggggcttg tctttccagc gggaagtggc
     2161 atgaaggcca gcgatatccg gcgcggtacc gtcctcatat atgaaggcca accctgccgc
     2221 gtcatggaat tccagcaccg gaccccgggc aatctccggg ccttcgtgca ggtgcggatg
     2281 cggaacctga ataccggcaa caccttcgaa actcgcttca gcgccaccga gctggtccag
     2341 gatgcgcggc tcgacaccaa agagctgcag gtcctttata aggacgtcaa cggcacccac
     2401 gtgatggatg ccgccaccta cgatcagtac agcctggacg acgaggtggt gggagacctg
     2461 gccgactgga tggaacccgg tatgaccttc atcgccgagt ggctggaagg caagccgatc
     2521 gcgctccagc tcccctcggt aatcgagctc gaaatcgtgg aaaccgcgcc cctgatgaag
     2581 accgccacca agaccgccag caccaagccg gcccgactgt cgaacggcgt gacggtacag
     2641 gtgccagagt tcatcaacag cggcgagcgg gtgcgggtga acccgaacac cggggagtac
     2701 ctggagcggg ccaaataacc attgacgatt gggcgattca cgattgacga ttacagcaaa
     2761 tcgagatccg ggctgaagca atcgtcaatc gtcaatcgtc aatgagcatc gccctcccat
     2821 ccaccgccac cacccccaca tcggtcgcca gcagcggatt cacgtccagc tcggcgatct
     2881 cggggaagtc gatcgccagc tgagccagcc gcagcagcgc gtcttcgatc gcggtcaggt
     2941 tgaccggcgg cgcgccccgc accccatcga gcagcttcac gcctcggatg ccccggacca
     3001 tgtcgcgcgc gtcggcccgg ccgaagggcg cgatccggaa ggtcacgtcg cctaacacct
     3061 ctaccagcac gccgcccagg ccgaacatca ccagcggccc gaagtcggga tcccgggtca
     3121 tgccgatgat gagctcgcgg ccgccccgca gcatgggctg caccaccacc ccttccaccg
     3181 ccgctccggg cgccacgcgg gcggcgccgg cctggatccg gtcccacgcg ccgcgcacgt
     3241 catcggcgct gcggaggtcg acctgcactc cgtcggcttc ggtcttatgc acgatgccgg
     3301 gagctaccac cttgagcacc accgggaacc cggcctcggc cgccgcgtgc accgcctcgt
     3361 cgacgctccg gacgaaccgg gcccgggcgg tgggaatgcc ataggccgtc agcagctcga
     3421 gggcggcgct ttcggtgagt cgggagcgcc cttcgcgacg ggcttgatcg aggagctcac
     3481 gggccgcgtc gcgatccact ttcagggcgt gaggctgggg caggggtcgc tcctgccatt
     3541 cgcgatagcg ggcccgcgcc gccagcgccc gcgccgccga ttcggggaag agataggccg
     3601 ggatgccggc ctcatgcagc tcggcccttc cctgcggcag gccctcatgc cccatcacca
     3661 ccgcgaagac cggcttgctg ggcatgccct tggccgcggc cgcgatggat tccgccacct
     3721 gggccgggga gttgggcggg atcgggacgt agatcgcgag cacgccgtcg acctgaggat
     3781 cgtccagcaa cgccgagagc gcggtccggt aaccgtcggg cgtggcactc gcgatcatgt
     3841 cgagcggatt ctggatcgag gcttcttcgg gaaagagcgc ctgcagccgt tcgaccgtcc
     3901 cggccgacag ctcggtgagc tcgagcccga ccggctcggc tgcgtccgcc gcgatgattc
     3961 cgggcccgcc cgcgttggtg accaccgcga tccgccggct ggcgggggcg gcctgggcgc
     4021 cgaagcccat ggcgaggtcg aacagcgcct ccaccgattc ggcc
//
LOCUS       DASWKS010000268         1934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2724287, whole genome shotgun sequence.
ACCESSION   DASWKS010000268 DASWKS010000000
VERSION     DASWKS010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2724287"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VGA78_07800"
     CDS             <1..725
                     /locus_tag="VGA78_07800"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9893813.1"
                     /translation="VSVRYQSGAPSIAAGTIHAINRSLAALPEIPVERLFAAEVWQDG
                     DVASVWAPYQVLLGDRVLHCGYDAFHLVRETGQWRLAGAIYTARPGECDAIQAAARTL
                     PRDPPVAERTAVLAAIEQFFDGMRRRDTAQLTASFSPRAAWIIVSYRDGTPTVFRRLA
                     AEDNARVARSPDRLDERLLDTVVRVDGDIAVVWGSYEFRVGNRVTHCGYDGFHLVREE
                     GWRLEGGVYTVRPDGCAGLRRP"
     gene            754..>1934
                     /locus_tag="VGA78_07805"
     CDS             754..>1934
                     /locus_tag="VGA78_07805"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9893814.1"
                     /translation="MIPHLAFALLLAGQSTAPGPDQWPTYGGAPGGTRYSPARQITRD
                     NVRRLEVAWMYRTGELGIGARDSAKITFEATPLFVNGTLYLSTAFGKVMALDPVTGGE
                     RWHFDTGVSRSRRFSEVTSRGVSAWRDLAAAPDAICAIRIFAATINARLHALDAKTGT
                     RCPGFGESGWVDLGAGVGMSRSIDYNPTSPPAVLGDLVIVGSAIGDNFNAFTGDGAVR
                     AFDARRGTERWRWNPVPPLADGSRVGAANAWAVLSVDSTRDLVFVPTSSPSPDFFGGR
                     RPGDNRWGNSVVALKGSTGELVWGFQTVHHDLWDYDNAAQPVLVTVRQNGRERAAVAQ
                     PTKTGSLFLLDRSTGEPLFPVEERPVPPSRVPGESAWPTQPFPTLPRPLMPQGRLRPE
                     DA"
BASE COUNT          280 a          662 c          671 g          321 t
ORIGIN      
        1 tggtatcggt ccgctaccag agtggagcgc ccagcatcgc ggctggaact atccatgcca
       61 tcaaccgatc cctcgccgcc ctccccgaga ttcccgtcga acgcctgttc gccgcggagg
      121 tgtggcagga cggcgacgtc gcgtcggtgt gggcccctta ccaggtgctg ctgggcgacc
      181 gagtgctgca ctgcgggtat gatgccttcc acctggtgcg ggagacgggc cagtggcgcc
      241 tggcgggcgc catctacacg gcccgtcccg gcgagtgcga cgccatccag gcggcagcca
      301 ggacgctgcc ccgggatccc cccgttgcgg agcgtaccgc ggtgctcgcc gcgatcgagc
      361 agttcttcga cgggatgcgg cggcgggata cggcgcaact gacggcttcg ttcagtcccc
      421 gagccgcgtg gatcatcgtg agctaccggg acggcactcc cacggtgttc cgccggctcg
      481 cggcggaaga caatgccagg gtagcccgct ctcccgaccg gctcgatgag cgcttgctcg
      541 acacggtggt tcgggtggat ggcgacattg ccgtcgtgtg ggggtcgtat gaattccggg
      601 tcggcaatcg ggtgactcat tgcgggtacg atggatttca tctggtgcgg gaagagggct
      661 ggcggctgga aggcggcgtc tacacggtcc gccccgacgg ttgtgccggg ctccgccggc
      721 catgatgtcg ggcccgaagc cgcccgaggt tccatgatcc ctcatctcgc attcgcactg
      781 ctgctggccg gccagagcac tgcacccggg ccggaccagt ggcccaccta cggcggggcg
      841 cccggcggca cccgctattc accagcccgc cagatcaccc gcgacaatgt tcgccggctc
      901 gaggtggcct ggatgtaccg caccggcgag ctggggatcg gggcccgcga ttcggccaag
      961 atcaccttcg aggcgactcc gctcttcgtg aacggcacgc tctacctcag taccgcgttc
     1021 ggcaaagtga tggcgctcga tcccgtgacc gggggggagc ggtggcattt cgacaccggg
     1081 gtgagccgga gccgccgttt ctccgaagtg acctcacgcg gagtatccgc ctggcgcgat
     1141 ctcgcggccg ctcccgacgc catctgcgcc attcgaatct ttgcggcgac catcaacgcc
     1201 aggttgcacg ccctcgatgc caagaccggg acccgctgcc ccggcttcgg ggaaagcggt
     1261 tgggtggatc tgggcgccgg ggtcggcatg tcgcgcagca tcgactacaa cccgacctcg
     1321 ccgcccgcag tgctcggcga cctggtgatc gtgggcagcg ccattggcga caacttcaac
     1381 gcgttcaccg gtgacggcgc ggtgcgagcc ttcgatgccc gccgcggtac cgagcgctgg
     1441 cgctggaatc cggtgccgcc tttggccgac ggaagccggg tcggcgccgc caacgcctgg
     1501 gcggtgctgt cggtcgacag cactcgcgat ctcgtcttcg tcccgacctc cagccccagc
     1561 cccgatttct tcggcggccg gcgaccggga gataaccggt gggggaattc ggtggtggcc
     1621 ctgaagggca gcaccggtga attggtctgg ggattccaga ccgtgcatca cgatctgtgg
     1681 gactacgaca acgccgccca gccggtgctg gtaaccgtgc gccagaacgg ccgggagcgg
     1741 gcggcggtgg cgcagccgac caagacgggt tccctctttc tgctcgaccg gtccaccggt
     1801 gagccgttgt tcccggtcga ggaacggccg gtgccaccga gccgggtccc gggcgagtcg
     1861 gcctggccga cccagccatt tccaaccctt ccccggccct tgatgcccca ggggcggtta
     1921 cgcccggagg acgc
//
LOCUS       DASWKS010000269         1924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2724739, whole genome shotgun sequence.
ACCESSION   DASWKS010000269 DASWKS010000000
VERSION     DASWKS010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2724739"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            344..721
                     /locus_tag="VGA78_07810"
     CDS             344..721
                     /locus_tag="VGA78_07810"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9893815.1"
                     /translation="MGAIVAANVAWGDAYVRGDGAVLASVYAEDARLMTEAGDVTGPS
                     AIREWLLRRRAAADTVQGTATATDQLDVAGDRAYEAGTLTYTLVARTPAGSTRELRVR
                     YLTFWQRQPDGRWLIVRSLRPVP"
     gene            738..1685
                     /gene="coaA"
                     /locus_tag="VGA78_07815"
     CDS             738..1685
                     /gene="coaA"
                     /locus_tag="VGA78_07815"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00554.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEX9893816.1"
                     /translation="MSRRVPQPSPFEPFTRAQWRRRRDTTPLTLSEEEVDRMRGVNEP
                     VSLKEVEEIYLPLSRLLSLHVAAIQELHATTGTFLERRIPKVPYVIGIAGSVAVGKST
                     FARLLQTLLARWPSHPRVDLVTTDGFLFPNRVLRSRGLMDRKGFPESYDLRRLVQFLA
                     DLKSAKPVVRAPVYSHLTYDIVPGRHVTVHRPDIVILEGLGVLHAGTAAADGPQVFVS
                     DFFDFSIYIDADETNIRQWFIERFLTFRKTAFRDPSSYFKRFARLSVPEARAMATKVW
                     RTINGRNLRENILPTRTRANLILVKGADHRVQRVLMRRL"
BASE COUNT          305 a          653 c          627 g          339 t
ORIGIN      
        1 ggcgccggtc ccgtcgatca cccgggcacc ccgaaggatc agccccgcgg ccctacggga
       61 gcggagtagc ggccaggccg tgagaccggt gagtgcggcg gtgccgctgt gaatgaaggt
      121 ccggcgggtc ggcatggccg aaggttgtca ctcgcgaccg ggtggcacaa ggaggggagg
      181 ccgcggtaca ctttgggcgg tgccagtcac gagtcgtcag tcgcgagtcg cgagaacgag
      241 gcgcggccgc cgccgcctgg gtctcctctt cctgctgggg tgcgaacccg ccaccccggc
      301 cccaccgcct tcgaatccat ccccggccgc gccggccgcg gtcatgggtg cgatcgtcgc
      361 cgcgaatgtg gcctggggcg atgcctacgt caggggcgat ggcgcggtcc tcgcctcagt
      421 gtacgccgag gacgcacggc tcatgaccga ggcgggagac gtcaccggtc catcggccat
      481 cagggaatgg ctcctgcgcc gccgcgccgc ggccgacacc gtgcagggca ccgctaccgc
      541 caccgatcag ctcgacgtcg cgggtgatcg ggcctatgag gcagggaccc tgacgtatac
      601 gctggtggcg cgcacacccg ccggctcgac ccgcgagctc agggttcgct acctgacctt
      661 ctggcagcgg cagcccgatg gtcgctggct catcgtccga agtctccggc cggttccctg
      721 accccgactt ccccagcatg agccgccggg ttccccagcc ctctcccttc gaaccattca
      781 cccgcgccca atggcggcgg cggcgcgaca ccacgcctct cacgctgtcg gaagaagaag
      841 tggatcggat gcggggcgtg aacgagccgg tttcactcaa ggaagtcgag gagatctacc
      901 tgccgctgtc gcggctcctg agcctgcacg tggccgcgat ccaggagctg cacgccacca
      961 ccggcacgtt cctggagcga cgcattccca aggtgcccta tgtcatcggc atcgcgggca
     1021 gtgtcgccgt gggcaagagc accttcgccc gcctgctcca gaccctgctg gcccgctggc
     1081 cctcgcaccc ccgggtcgac ctggtcacca ccgacggttt tctctttccg aaccgggtgc
     1141 tgcggtcgcg gggactgatg gaccgcaagg gatttccgga gagttacgac ctgcggcggc
     1201 tggtgcagtt tctggccgac ctcaaatcgg ccaaaccggt ggtgcgggcc ccggtgtact
     1261 cccatctgac ctacgatatc gtgccggggc ggcacgtcac ggtgcatcgc ccggacatcg
     1321 taattctcga ggggctgggg gtgctgcacg ccgggaccgc cgccgcggac gggccccagg
     1381 tcttcgtgag cgatttcttc gatttctcga tctacatcga cgccgacgag accaacatcc
     1441 gccagtggtt catcgagcgc tttctcacct tccgcaagac cgccttccgc gatccctcct
     1501 cgtacttcaa gcgcttcgcg cggttgtcgg taccggaagc gcgcgccatg gcgaccaagg
     1561 tctggcggac catcaacggc aggaatctgc gggagaacat tctcccgacc cgcacccggg
     1621 ccaacctgat cctggtgaaa ggcgcggatc atcgggtgca gcgggtgctg atgcgacgac
     1681 tgtaacgacg gctgaattgg caagggttga ggggggagtc aatgcagagt gccgaatgcc
     1741 aaatgcccaa tgcggatggt tcgcgtggct gttcacctct gcaatgggca ctgggcattg
     1801 agcattctgc atttatggta gatttcatgt ctccaccacc gaccctcgat atgcgcggcg
     1861 ttgtcctgat tctcctggtt cattgttcac tgttcaccgt tgagttcgca gccgcccagc
     1921 ctcg
//
LOCUS       DASWKS010000270         2798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_511653, whole genome shotgun sequence.
ACCESSION   DASWKS010000270 DASWKS010000000
VERSION     DASWKS010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511653"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /gene="lptE"
                     /locus_tag="VGA78_07820"
     CDS             <1..493
                     /gene="lptE"
                     /locus_tag="VGA78_07820"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HEX9893817.1"
                     /translation="GVRLSVSLSALLLGGCMYGFAGGGLPEGIRTVAVLPFENLTSDP
                     TLTAEINAAVREAVQDRLGLRQAGENQADALVRGTITRYEPDLPVSFTGGDNNRVNVT
                     GRLVQIVVSVEILNQRDDRVLWKRDGLVLEGNYETGRESEGRRKALQNLVTNIVEGAQ
                     SQW"
     gene            490..864
                     /locus_tag="VGA78_07825"
     CDS             490..864
                     /locus_tag="VGA78_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893818.1"
                     /translation="MSPGAGRAGASKLGCLVSLVLFVGALIYGTRVGKMYWRYYEFVD
                     DIKESARFAQMQSDDVIRRNLLQRIDELAIPAEAKRGLVVRRTQVPPYRIVIRTQYRE
                     RLDLPVGPPRYIVFKPNVETGF"
     gene            933..1337
                     /gene="rfaE2"
                     /locus_tag="VGA78_07830"
     CDS             933..1337
                     /gene="rfaE2"
                     /locus_tag="VGA78_07830"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HEX9893819.1"
                     /translation="MFTNGVFDLLHPGHVDYLETARAQGDGLIVGVNSDASARRLGKG
                     TGRPVQSADARARVLAGLEAVDKVVLFDEDTPLALIEAVHPDVLVKGGDYSRSTIVGA
                     DFVESYGGTVRVIDLVPGHSSTALVERLRDST"
     gene            1324..2034
                     /gene="rph"
                     /locus_tag="VGA78_07835"
     CDS             1324..2034
                     /gene="rph"
                     /locus_tag="VGA78_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX9893820.1"
                     /translation="MTRPDGRAPDALRAVVLERGANPYAEGSCLVRFGGTLVHCTASV
                     EAGAPPFKKGSGEGWVTAEYAMLPRATQDRTPRERHGPGGRSQEIQRLIGRSLRAAMS
                     TMAFGEFTIRIDCDVLQADGGTRTASITGGCVALADACGWLSHRTGVASPFGHLVAAV
                     SVGIVDGEPRLDLAYAEDKRAGVDANIVMLEPDRFVEVQGTGETAVFSRAELDSVIEL
                     GRQGIAQLFQLQRRTLGL"
     gene            2031..2642
                     /locus_tag="VGA78_07840"
     CDS             2031..2642
                     /locus_tag="VGA78_07840"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEX9893821.1"
                     /translation="MKLLVATRSAGKEREVRQLLEGAGVEVVLPQDVGLAPTVDERRL
                     ELGDTFEQNARAKAEYFVKRSGLPTVADDSGLEVFSLGGEPGVRSRRWANAEGTELQI
                     DAANNAYLLRRLGGAPEAKRRARYRCVLVYLPKVGAIPQVYEGACTGRILEAPQGSAG
                     FGYDPLFHSDELEKSFGMATPEEKQRAGHRGKAFTAFIAGVFP"
BASE COUNT          427 a          911 c         1015 g          445 t
ORIGIN      
        1 tggcgtccgc ctgagcgtca gccttagcgc gctgctgctc ggcgggtgca tgtacggatt
       61 cgcgggcggc ggattgcccg agggaatccg cacggtggcc gtgcttccct tcgagaacct
      121 gacctccgat cccaccctca cggcggagat caacgcggcc gtgcgggagg cggtgcagga
      181 ccggctgggg ctgcgccagg cgggcgagaa ccaggccgac gcgctggtcc gcggcaccat
      241 cacccgctat gagcccgatc tgccggtgtc cttcaccggc ggcgataaca accgggtgaa
      301 cgtcaccggc cggctggtcc agatcgtggt ctcggtggag atcctcaatc agcgcgatga
      361 ccgggtcctc tggaagcggg atggactggt cctcgagggt aactacgaga ccgggcggga
      421 gagcgagggc cgacgcaagg cgctccagaa cctggtcacc aacatcgtcg aaggagccca
      481 gtcccagtgg tgagtcctgg cgctggacgc gcgggcgcca gcaagctggg ctgcctggtc
      541 tccctggtgc tgtttgtggg cgcgctcatc tatggcaccc gggtggggaa gatgtactgg
      601 cgttactacg agttcgtgga tgacatcaag gaatcggccc gcttcgccca gatgcagtcc
      661 gacgacgtca tccgccgcaa cctgctccag cggatcgatg agctggccat tccggcggag
      721 gccaagcggg gcctggtggt gcgccggacc caggttccgc cctaccgcat cgtgatccgc
      781 acccagtatc gcgagcgact ggatcttccg gtcggcccgc cccggtatat cgtcttcaag
      841 ccgaacgtgg agacgggatt ctgagctccc gcgaaaaaat cgtatcactg gatgagctgc
      901 tggcgtggcg ccgccggcgg accggctcgg tcgtgttcac caacggggtc ttcgacctgc
      961 tgcatccggg acacgtcgac tatctcgaga ccgcccgggc ccagggcgac gggttgatcg
     1021 tgggggtgaa ctccgacgcc tcggcccgcc ggttggggaa gggaaccggt cggccggtgc
     1081 agtccgccga cgcccgggcc cgggtgctgg cgggactgga ggcggtggac aaggtggtcc
     1141 tgtttgacga ggatacaccg ctcgcgttga tcgaggcggt gcacccggac gtgctcgtca
     1201 agggaggaga ctactcccgc tcgaccatcg tgggggcgga tttcgtcgaa tcctatggag
     1261 gcaccgtgcg ggtgatcgac cttgtgccgg gccattcgag cacggccctc gtggagcggt
     1321 tgcgtgactc gacctgatgg gcgggccccg gacgcactgc gcgcggtggt gctcgagcgc
     1381 ggcgccaatc cctacgccga gggctcctgc ctggttcgct tcggcggcac gctggtccac
     1441 tgcaccgcct cggtagaggc cggggctcct cccttcaaga agggcagcgg cgagggctgg
     1501 gtgaccgccg agtacgccat gctcccacgc gccacccagg accgcacccc gcgcgagcga
     1561 catggtcccg gcggccggag ccaggagatc cagcgcctga tcggccgttc gcttcgggcc
     1621 gcgatgtcca ccatggcctt cggcgagttc accatccgga tcgactgcga tgtgctgcag
     1681 gcggatgggg gaacccgcac ggcgagcatc accggcggct gcgtcgccct ggccgatgcc
     1741 tgcggctggc tgtcccaccg caccggggtc gcgtcgccct tcggccacct ggtggccgcg
     1801 gtgtcggtgg ggatcgtcga tggcgagccg cggctggatc tggcctacgc cgaggacaaa
     1861 cgggccggcg tcgatgccaa catcgtcatg ctggagccgg atcggttcgt ggaagtacag
     1921 ggcaccggtg aaaccgcggt cttctcgcgg gcggagctgg acagcgtgat cgagctgggc
     1981 cgccagggca tcgcccagct gttccagctg cagcgccgga cgctgggcct gtgaagctgc
     2041 tggtggccac gcgcagcgcc gggaaagagc gcgaagttcg ccagctgctg gagggcgccg
     2101 gggtcgaagt ggtcctcccc caggatgtgg gcctggcgcc aacggtggac gagcgccggc
     2161 tggagctggg cgacaccttc gagcagaatg cccgggccaa ggccgagtac ttcgtgaaac
     2221 ggagcggtct gcccacggtc gccgacgaca gcgggctgga ggtgttctcg ttaggcggtg
     2281 agccgggcgt gcgttcccgg cgttgggcca acgccgaggg aaccgagctg cagatcgatg
     2341 ccgccaacaa cgcctacttg ctcaggcggc taggtggcgc ccccgaggcc aagcgccggg
     2401 ctcgctaccg ctgcgtgctg gtctacctgc ccaaggtggg ggccattccc caggtctacg
     2461 aaggcgcctg caccggccgg atcctcgagg cgcctcaggg cagcgccggg ttcgggtacg
     2521 atccgctgtt ccattccgac gagctggaga agagcttcgg catggccacg ccggaggaga
     2581 agcagcgggc cggccaccgg ggcaaggcct tcaccgcgtt catcgccgga gttttcccgt
     2641 gaacagcctg ccggtgccgc cgaaccgcct tcgcgcccgg ctggaggcgg gacagctctg
     2701 cgtcggcacc atgctggtgg aagtgcgcca gccctcggtc atgagcatcc tggccaacgc
     2761 ggggttcgac ttcgtcctgg tggacaacga gcatggcc
//
LOCUS       DASWKS010000271         4559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_869795, whole genome shotgun sequence.
ACCESSION   DASWKS010000271 DASWKS010000000
VERSION     DASWKS010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_869795"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VGA78_07845"
     CDS             complement(<1..393)
                     /locus_tag="VGA78_07845"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX9893822.1"
                     /translation="MGLVVLVGVVLLGYAIFTFNQLTQLRQLADNAWADIDVQLKRRH
                     DLIPSVVSVVKGHAGYERGTLEAVVEARSRALQASGPAAKAAAENPVEGSLHRIFAIA
                     EAYPELRAVQSFRELQQTLAEIEDHLQNA"
     gene            complement(538..1281)
                     /locus_tag="VGA78_07850"
     CDS             complement(538..1281)
                     /locus_tag="VGA78_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEX9893823.1"
                     /translation="MSRFRVLSVGFLVIGAAIAGRLAGQRGNWRGMHIEPNLPYDGRF
                     TFARIRYTVYRRSGWEFDYPTMERNLMTMMEEVSALRPHVRGSNVHTFDDPALLKYPV
                     AYLSEPGYWIPSESEMTGLRTYLAKGGFLIVDDFMRSEWENFEHQMRRVLPTARIDRL
                     DLSHPVFDAFFRIKTLDMAYPHNPYLKAEFYGIHEDNDPGKRLIVVINYNNDIGDYME
                     WSADGLWPVDITNEAYKFAINYIIYALTH"
     gene            1324..1842
                     /locus_tag="VGA78_07855"
     CDS             1324..1842
                     /locus_tag="VGA78_07855"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX9893824.1"
                     /translation="MLDAIRRFVTRHIAAGPSGPANPEPGTGVEQHQAPGTVPDSVKV
                     AACALLLEVAHADGEFTPDEQARIEDALARHFGLDEPVRKELIALAEAERRQSIDHFQ
                     FTRLIRDHYDLGQKVLLAELMWTVILSDGKVADHEAYLVRKLASLLELPPAYLAQARH
                     RAGPPGPEQESP"
     gene            2015..2203
                     /locus_tag="VGA78_07860"
     CDS             2015..2203
                     /locus_tag="VGA78_07860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893825.1"
                     /translation="MIHVDEFARWLLAAADEDTPLTSDHFDHDAAILEYQRYGFDLLR
                     GCYQTAALGNEYVLQLIM"
     gene            2226..3593
                     /locus_tag="VGA78_07865"
     CDS             2226..3593
                     /locus_tag="VGA78_07865"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9893826.1"
                     /translation="MILSVLRGLLRVFFRRVEVVGADHVPPAGAAVFAPNHPNSLLDP
                     LVLFATVPRPVATLAAEPLFRKPVLGWVMRSLGAIPVYRREDSADRSQNRGTFTAARA
                     HLAGGGAIAIFPEGVSHDDPSLRPIRTGAARIALGVTGVSEIILVPAGLFYTDRARFR
                     SSVLVCFGPPIRVTPSAVLTEGEPPVDEVQALTSRLEAALGRLVLQADERRALQLVTA
                     AERIFTTAEDGPANLRTVLRRRQRIVDQYARLRARDPARVRELETRVRRYQRWLKATG
                     LEHEHLPPSGFRPLRVTGMMAIALLALVVLLPLATVGIVLHFPAWHLTRWIARRMHAR
                     SGRGEDVLGTMKLMVGLVLYPLTWLAVAAAGWLVGGWRGAMIAGAVGPLTGALALRFR
                     WRFAQLTSILRGILLVLFGTRLYRELLAERRRLRDEFASLEDVTADPAGATPGTGDRE
                     EAHAG"
     gene            3765..4304
                     /locus_tag="VGA78_07870"
     CDS             3765..4304
                     /locus_tag="VGA78_07870"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9893827.1"
                     /translation="MDHSIPALVERVRQGDVDAFAPIVARFRPEFGRYARHMLGNRED
                     AEDALQETFVRAYRWLGHCREPRRFGAWAFRILVNRCRTARRKALGHDRRTAPEMMLE
                     HHGVPSTAETAAWREEIDRALRQLPSDQREAFLLRHVEGYSYEEMTELTGAGLSALKM
                     RVKRACDRLRSELEGARHE"
     gene            4297..>4559
                     /locus_tag="VGA78_07875"
     CDS             4297..>4559
                     /locus_tag="VGA78_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893828.1"
                     /translation="MNDANDRLDPLLQRLVDTLRLPVDLSPDLDAQIMARIRGRQSAG
                     GALRRILAGAGLALAAGLGAFLLARDDRAPDRLAQPVQFSIQAG"
BASE COUNT          708 a         1522 c         1526 g          803 t
ORIGIN      
        1 ggcgttctgg agatggtcct cgatctcggc cagggtctgc tgcagctcgc ggaagctctg
       61 caccgcccgg agctcgggat aggcctccgc gatggcgaag atccgatgca gcgacccttc
      121 caccggattc tccgcggcgg ccttggcggc gggaccgctg gcctgcagcg cccggctccg
      181 ggcttccacc accgcctcga gcgtcccccg ttcgtacccg gcgtggccct tcaccaccga
      241 tacgaccgac ggaatcaggt cgtgccgccg tttgagctgg acgtcgatgt cggcccaggc
      301 gttgtccgcc agctggcgga gctgggtcaa ctggttgaac gtgaagattg cgtagcccag
      361 gagcacgacg ccaaccagga cgacgaggcc catgccagct ccgatgttgt ccgcggatca
      421 accaatatac gtcgcgggtg aggttgcccg agccgaccgt ccgtccgccc gtccgcccga
      481 ccgcccgacc gtccgaccgt ccgaccgtcc aaccgtccaa ccgtccaacc gtccgactca
      541 gtgtgtgagg gcgtagatga tgtagttgat ggcgaacttg taggcttcgt tggtgatatc
      601 caccggccag agaccgtcgg ccgaccattc catgtagtcg ccgatgtcgt tgttgtagtt
      661 gatcactacg atgagtcgct tgccgggatc gttgtcctcg tggatgccgt agaactccgc
      721 cttgaggtag gggttgtggg gataggccat gtccagcgtc ttgatccgga agaacgcgtc
      781 gaacaccgga tgggacagat ccagccggtc gatccgtgcc gtggggagta cccggcgcat
      841 ctggtgctcg aagttctccc attcgctccg catgaagtca tccacgatca ggaatccgcc
      901 cttggccagg taggtgcgga gacctgtcat ttccgactcg ctcgggatcc agtagcccgg
      961 ctcagacagg taggcgacgg gatacttgag cagcgcgggg tcgtcgaagg tgtggacgtt
     1021 gctgccgcgg acgtggggcc ggagcgctga gacctcctcc atcatggtca tcaggttccg
     1081 ttccatggtc ggatagtcga actcccatcc gctccgccga tagaccgtgt accggatgcg
     1141 ggcgaaggtg aaccggccgt cgtagggcag gttgggttcg atgtgcatgc cgcgccagtt
     1201 tcctcgctgg cccgccaggc gcccggcgat cgctgcaccg atcaccagga accccacgga
     1261 gagcacccga aaccgggaca taggggataa tatggtagag ccgaagcaaa gggttcatga
     1321 accatgctcg atgccatccg ccggttcgtc acccgccata tcgcggccgg cccgtcaggc
     1381 ccggcgaacc ccgaacccgg aaccggtgtg gaacaacacc aggcaccggg caccgttccg
     1441 gacagcgtga aggtggcggc ctgcgccttg ctgctcgagg tggcccatgc cgatggggag
     1501 ttcacgcccg atgaacaggc ccggatcgag gacgcgctgg cccgtcactt cggcctcgac
     1561 gaaccagtac gcaaggagct catcgcgctg gccgaggccg agcggcgtca atcgatcgac
     1621 catttccagt tcactcggct gatccgcgat cactacgatc tgggccagaa ggtgctgctg
     1681 gccgagctga tgtggaccgt gattctctcg gatgggaaag tggccgacca cgaggcgtac
     1741 ctggtgcgga aactggcgag cctgctggag cttcctccgg cctacctggc gcaggcgcga
     1801 catcgggccg gcccccccgg accggaacag gaatcgccct gagcccggcc gatctcgatc
     1861 aatgaccgtc tcattcgcct ggggggaatc gacttcaccc aattggcgct tcaccgcgag
     1921 accctgcccg acctgctgga gacctttccg caggaggagt tcgcggacct gcgcaaccgg
     1981 gtggaccgat ggccggccag cgccgtcgcc ccggatgatt catgtcgacg agttcgctcg
     2041 ttggctgctg gccgcggcgg acgaggatac tccgctcacc agcgatcact tcgaccatga
     2101 cgccgccatc ctcgagtatc aacgctacgg gttcgacctg ctgcgtggtt gctaccagac
     2161 agcggccctc ggcaacgagt atgttctcca gctgatcatg taatcccagg agacgtccgc
     2221 ccgccgtgat actcagtgtc ctccgcggtc tgctccgggt gttcttccgg cgcgtggaag
     2281 tggtcggtgc cgaccacgtg ccgccggccg gcgccgcggt attcgcgccc aatcatccca
     2341 attcgctgct cgatcccctg gtgctctttg ccaccgtccc ccgtccagtg gccacgctgg
     2401 ccgccgagcc gctgttccgg aagccggtcc tgggctgggt catgcggtcc ttgggggcca
     2461 ttccggtcta ccgcagggaa gactcggccg atcgttccca gaaccggggg accttcactg
     2521 cggcgcgggc ccatctggcc ggcggcggtg ccattgccat tttccccgag ggcgtctccc
     2581 acgacgaccc gtcgctccgc cctatccgga ccggcgccgc ccgcatcgcc ttgggcgtca
     2641 ccggtgtctc ggagatcata ctggttcccg cgggactgtt ctacaccgac cgggcccggt
     2701 tccggagctc ggtcctggtg tgcttcggcc cgccgatccg ggtaacccca tccgctgttc
     2761 tcaccgaggg cgagccgccg gtggatgaag tccaggcgtt gaccagccgg ctcgaggcgg
     2821 ccctcgggcg actggtgctg caggcggacg agcggagagc gctgcaactg gtcaccgcgg
     2881 cggagcgcat cttcaccacc gccgaggacg ggccggccaa tctgcgcacg gtcctgcgcc
     2941 ggcgacaacg tatcgtcgac cagtacgctc ggctccgagc ccgtgacccg gcgcgggtgc
     3001 gcgagctgga gacgcgggtg cgtcgctacc agcgctggct caaggccacg ggcctggagc
     3061 acgagcatct cccaccctcg gggtttcgtc cgctcagggt gaccgggatg atggcgatcg
     3121 cgttgctggc gctggtggtc ctgctgccgc tcgcgacggt tggcatcgtg ctgcacttcc
     3181 cggcgtggca cctcactcgc tggatcgcgc gccgaatgca cgcccgctcc ggccggggag
     3241 aggacgtgct gggcacgatg aagctgatgg tgggactggt tctttatccg ttgacctggc
     3301 tcgcggtcgc cgcggcggga tggctggtgg gcgggtggcg cggtgcgatg atcgcggggg
     3361 cggtaggccc gctgaccggc gccctggcgc ttcggttccg gtggcgcttc gcccaactca
     3421 cctccatcct gcggggcatc ctcctggtgc tgttcggcac ccggctctac cgcgagcttc
     3481 tggccgaacg ccgccggctg agggacgaat ttgccagcct ggaggacgta accgcggacc
     3541 cggcaggcgc aacaccggga accggggatc gagaggaggc tcacgctgga tgaggtcgcg
     3601 gcccctcgcg acccggctag accctggtgc atctctctct gcagctgaaa cgccccaccc
     3661 taccgtggcg taggatccag catcctcaga cgacttagtc ctcagtcctg agttcttggt
     3721 ccttgagcat gtgacgaaat cctcgattcc caggtctgac cttggtggac cacagcattc
     3781 cggccctcgt cgagcgggta cggcagggcg atgtagacgc cttcgcgccc atcgtcgccc
     3841 gatttcggcc tgaattcggc cgctatgccc ggcacatgct gggcaatcgc gaggacgcgg
     3901 aagatgcgct gcaggagacc ttcgtccggg cctatcgctg gctgggtcac tgccgcgagc
     3961 cccggcggtt cggagcctgg gcctttcgca tcctggtgaa tcgctgtcgc accgcccggc
     4021 ggaaggcgct cgggcatgac cggagaaccg caccggagat gatgctggaa caccacggcg
     4081 ttccttccac ggccgagacc gcggcctggc gcgaggagat tgaccgggct ctgaggcagc
     4141 tcccgtccga tcagcgcgag gcctttctgc tccggcacgt ggaaggctac tcctacgagg
     4201 agatgacgga gctgaccggc gccggactgt cggccctcaa gatgcgggtg aaacgagcct
     4261 gcgatcggct ccgcagcgag ctggagggcg cgcgccatga atgatgcgaa cgaccggctc
     4321 gatcccctgc tgcagcgcct ggtcgatacc ctgcgactgc cggtggatct gagcccggat
     4381 ctggatgcgc agatcatggc gcggatccgg ggacgccaat cggccggcgg cgcgctgcgg
     4441 cggattctgg cgggcgccgg attggcgctg gccgcgggcc tgggagcctt cctgctggcg
     4501 cgcgacgata gggccccgga ccgcctggcg cagccagtgc agttttcgat tcaggcggg
//
LOCUS       DASWKS010000272         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2725491, whole genome shotgun sequence.
ACCESSION   DASWKS010000272 DASWKS010000000
VERSION     DASWKS010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2725491"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            738..>1821
                     /locus_tag="VGA78_07880"
     CDS             738..>1821
                     /locus_tag="VGA78_07880"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9893829.1"
                     /translation="MLKGLKELGFTRPTPIQTEAIPQALAGRDILASAVTGSGKTAAF
                     LLPILHQLIHRPRRTTRALVVTPTRELALQILSDLNAMAVHTPVTGAAIFGGVGMGPQ
                     EHAFRSGVDIMVATPGRLLDHFRAPYGKLPGIEFLVLDEADRMLDMGFLPDIRRVLKH
                     LPAKRQTLFFSATIPPAIAGLTRELLRDPAVISLQRKAAPAVGITQAVYPVPQEAKAP
                     LFLTLLQRGELNEALVFTRTKHRADRLAKFLVKHGIDAERIHGNRSQLQRTAALAGFK
                     SGRHRVLVATDIMARGIDITELGHVVNFDVPPVPEDYIHRVGRTARAELTGDAFTFVA
                     PEEEDDLRRIERALGKRLPRVTVPDFD"
BASE COUNT          318 a          645 c          570 g          288 t
ORIGIN      
        1 ccggggaggt cctcggtggt ggcgtcttcg gggaattggt cgatccaggc cgccaggaag
       61 tgatcggcga accggttgac cgcggcagcg gggtccggct gggccgggct gcagcccaga
      121 cccatccagc cgatcgccag gcagagcgct gggtgaacgg ttgcccgggt caccgtcagc
      181 atagtaacgg tagaggtgag gtgggcgagg gaggaatcaa ctggagagtg ccgaatgccc
      241 aatgcccata gcagagggga actattccgg cggcctcctt ctgcaatcgg cactgggcat
      301 tgggcattct ccagcgaggt ccttcgtggc ccggggaatg ccgtgggccg caagagcgta
      361 ggcgccaatg acgaggtact cagcgccctc tgcggacagc gtggacaaca tgtcgcggaa
      421 gtctggattc accgatccgc tctcctccga acgcccacgc gtccaccgtc aaccgccaga
      481 ccaggcgcat ccgctcggcg ggggtcatcg cctccaggtc agagttatcc tccggatcct
      541 ggagccgacg aacaatcaag ctcacccgtc gcttcgtcat gtcgaaatct aaccagcgtc
      601 gccaatggac gggccctctg cctgagaccc tcacatttcg gggccggtcc tgccaccttt
      661 cccgcttccc gaaacctgtt ccaccccgaa atcgaggacc gaccctgcca ttcacgtcgc
      721 tcaaactcca cccctcgttg ctcaaaggcc tcaaggaact cggcttcacc cgcccgaccc
      781 cgatccagac cgaggccatc ccccaggccc tggcgggccg ggatatcctt gccagtgccg
      841 tcaccggcag cggcaagacc gccgcgttcc tgcttccgat cctgcaccag ctgatccacc
      901 ggccccgccg caccacccgg gccctggtcg tcacgcccac ccgcgagctg gcgctccaga
      961 tcctgtcgga cctgaacgcc atggcggtcc acacccctgt caccggagcg gcgatcttcg
     1021 gcggagtggg catggggccg caggaacatg cgttccggag cggcgtcgac atcatggtcg
     1081 cgacaccggg ccggctgctc gaccacttcc gcgccccata tggcaagctg cccggcatcg
     1141 agttcctggt cctggacgag gccgaccgga tgctcgacat ggggtttctg cccgacatcc
     1201 gccgggtgct caagcacctg ccggccaaac gccagaccct gttcttctcg gcgaccatcc
     1261 cgccagccat cgccgggctc acccgggagc tgttgcgaga cccggcagtc atcagtctcc
     1321 agcgcaaggc cgccccggcg gtaggaatca cccaggcggt ctatccggtg ccccaggagg
     1381 ccaaggcacc tctcttcctg acgctgctgc agcggggcga gctgaacgag gcgctggtct
     1441 tcacccgcac caagcatcgg gccgaccggt tggccaagtt cctggtgaag cacggcatcg
     1501 acgcggaacg gattcacggc aaccggtccc agctgcagcg caccgccgcg ctggccggct
     1561 tcaagagcgg caggcatcgg gtcctggtag ccaccgacat catggctcgg gggatcgata
     1621 tcaccgagct gggccacgtc gtgaacttcg acgtgccgcc ggtgccggag gattatatcc
     1681 accgggtcgg acggaccgcg cgggcagagc tcaccggaga cgccttcacc tttgtggcgc
     1741 ccgaagaaga ggacgacctg cgccggatcg agcgggcgct cggcaaacgc ctgccccgcg
     1801 tgacggtgcc cgatttcgat t
//
LOCUS       DASWKS010000273         2296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_128997, whole genome shotgun sequence.
ACCESSION   DASWKS010000273 DASWKS010000000
VERSION     DASWKS010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128997"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            433..624
                     /locus_tag="VGA78_07885"
     CDS             433..624
                     /locus_tag="VGA78_07885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX9893830.1"
                     /translation="MKSLLQRFWRDESGQGLVEYALIIALVAVALILILIFLRNRIGF
                     VFLRAGNELNNAPGNQMAS"
     gene            730..1263
                     /locus_tag="VGA78_07890"
     CDS             730..1263
                     /locus_tag="VGA78_07890"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HEX9893831.1"
                     /translation="MPDSLGGGLSTAVLLFVAVAAAVTDLRQRRIPNSITITGTLLGL
                     LLAALGGGAAFLQALGGAGIGLAIGMVCFALGILGGGDAKLLMAFGALMGMARLPGAL
                     LVSGALGGVVALVFAIRKGVIVPALLGTGRILVRMVGFGRGQPAPVSVSKAVGEVPYG
                     LAISAGSVFWWFFGGAL"
     gene            1260..1685
                     /locus_tag="VGA78_07895"
     CDS             1260..1685
                     /locus_tag="VGA78_07895"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX9893832.1"
                     /translation="MKKRFHIRNRRGQALVEFALVLPILMLMVVGLIEMARAWNLHQV
                     ITDASREGCRLAVIADPAVTQATVDSAIQNRIASAGFDPTLVAITFPDGFHTGSGNVT
                     ACRIKAAYQFGLLGPLMRIVSPSTNGVINMITIARMRNE"
     gene            1689..>2296
                     /gene="cpaB"
                     /locus_tag="VGA78_07900"
     CDS             1689..>2296
                     /gene="cpaB"
                     /locus_tag="VGA78_07900"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX9893833.1"
                     /translation="MAIRTRSLVLFFFALASGLAAGWLALSYLRKQSRPLLSTGPAST
                     GAVVAARDLPVGTLLQERDLKSISWPGDALPPGMVTVPEGALGRGLIAPLRVNEPIME
                     SKLAPREVGSGLHTLVAEGMRALSIRVDDVIGVSGFTLPGTRVDVMLTTAEGAPADEP
                     TTRIILQNIHIIAAGQSIQTDPQGRPVSVPVISMLVSPEQAET"
BASE COUNT          351 a          720 c          800 g          425 t
ORIGIN      
        1 agcctgggac cgagaaggac cggcgcggcc agggtccaga ggatgaaaac gatggccggg
       61 atcgatggca tggggatcca gctacctcaa aaggttctgc actgttgcgc gtccgcctca
      121 gaaagtgtag ataggacgtt actgtcgggt ccaaacttag gtcgttccgc cagcgcctcg
      181 agtggctcgc cgagtgtggg cgcgactcga ggtggtggcc ggatgttaga gcctgacaat
      241 ggttaagggc ccttaatcta gcgatctgcc ggcgcaggat atatatcgca tgggttctgc
      301 catccaggtg gtacgcgggt tgcgagtcgt gaccgccgct cccaaggtcg cgttgcggcc
      361 cagtcctggg atgccgcacc gctgtaccgt gcggctccaa tcccgcggtt cagcttctca
      421 cggaggtgcg gcatgaagtc gctgttgcag aggttctggc gcgatgagtc aggccagggg
      481 ctcgtggagt acgccctgat catcgccctg gtcgcggtgg ctctgatcct gattctgatc
      541 ttcctgcgga accgtatcgg tttcgtgttc ctgcgggcag gaaacgagct gaacaacgcg
      601 ccgggcaacc agatggcgtc ctgacgcctc agttacaggg tctcacaagc tggagcggtc
      661 acgggcgcgc cgggcttccc ggtgcgcctc gtgactctct agcatagcta tagtcaggca
      721 ggtgaagctg tgcccgactc cctcgggggc ggccttagca cggccgtact cctctttgtc
      781 gccgttgccg ccgcggttac cgacctgcgc cagcggagga tccccaactc cattaccatc
      841 acgggaacac tgctcggact gctgttggct gcacttgggg gcggggccgc gttcctccag
      901 gccctgggag gcgcgggcat cggccttgct atcgggatgg tctgcttcgc gctcgggatc
      961 ctgggcggcg gagacgcgaa gctgttgatg gcgttcggcg cgctcatggg catggcccgg
     1021 ctcccgggag ccttactggt gagcggggcg cttgggggcg tggtcgcgct ggtgttcgcc
     1081 atcaggaagg gagtcatcgt accggccctg ctggggaccg gccggatcct ggtccggatg
     1141 gtgggcttcg gccgcggcca gccggccccg gtctcggtct ccaaggcggt cggggaagtg
     1201 ccttacgggc tggccatctc agccggctcg gtcttctggt ggttcttcgg gggtgccctg
     1261 tgaagaaacg ctttcacatc cgcaatcgca gggggcaggc cctggtggag ttcgccctgg
     1321 tgctgccgat cctgatgctc atggtggtcg gcctgatcga gatggcccgt gcctggaacc
     1381 tgcaccaggt catcaccgat gcctcccggg agggctgccg cttggcggtg atcgccgacc
     1441 cggcggtgac gcaggccacg gtggatagcg cgatccagaa tcggatcgcc tcggccggat
     1501 tcgatccgac cctcgtggca atcacctttc ccgacggctt ccacaccggg tcgggcaacg
     1561 tcacggcgtg ccgtatcaag gcggcatacc agttcgggct cttggggccg ctcatgagga
     1621 tcgtctcgcc gtccaccaac ggggtcatca acatgatcac catcgcgcga atgaggaacg
     1681 agtagccgat ggcgatccgc acccgatctc tcgtcttgtt tttcttcgcg ctcgcaagcg
     1741 ggctcgcggc gggctggctc gctctcagct atctgcggaa gcagagccgg cccctgcttt
     1801 cgaccgggcc ggcgtccacg ggagccgtgg tcgccgcccg ggacctcccg gtcggcaccc
     1861 tgctgcagga gcgagacctc aagagcatca gctggccggg ggatgcgctt ccaccgggca
     1921 tggtgacggt gccggaaggg gcgctcgggc gagggctgat cgccccgctg cgggtgaacg
     1981 agccgatcat ggagagcaag ctcgcccccc gggaagtcgg gagcgggttg cataccctgg
     2041 tggcggaagg catgcgcgcg ctcagcatcc gggtggacga cgtcatcggg gtctccgggt
     2101 tcaccttgcc gggcacccgg gtggacgtca tgctgaccac ggccgagggc gcgccggccg
     2161 acgagcccac gacccgaatc attctccaga acatccacat catcgccgcg ggacagagca
     2221 tccagaccga tccccaggga cggccggtgt cggtgcccgt gatctccatg ctggtctcgc
     2281 cggagcaggc ggagac
//
LOCUS       DASWKS010000274         3705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2375535, whole genome shotgun sequence.
ACCESSION   DASWKS010000274 DASWKS010000000
VERSION     DASWKS010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375535"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1353
                     /locus_tag="VGA78_07905"
     CDS             <1..1353
                     /locus_tag="VGA78_07905"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893834.1"
                     /translation="GYADVARKTPMTPATVMHSGSMGKTYTGTAVMQLVERGVLSLHD
                     PINQYLKGFKAVNPLGEREITVHDLLTHQSGLAGNDAGSDFLPPRPLQEHVREGYGQS
                     TFGSYAGTVPRWGAKVGEKFIYSNFGLATLGYLVEVTNPEGLSFSEYVQKHVMDPLGM
                     TSSQYPPVQDARHVRPEIFARMSTGYALLGTVRIPTPTIYFADHPAGTVVTTPGDHIK
                     LLLAYLNRGSYNGYQLLKPETVQAMLTPQSTRDARQVGLIWMLGNQGKPDSWFGHGGA
                     HMFGWHNDFRAYPEQDFAVAVATNAWDMVLWGDATWRPAYWLIEDFISSWITREKAGT
                     LRAVPRQTWAWKTSYVIGLTMAEQLKGLLAITSPLTPAMIDTLARQGEEYSPAAGSKR
                     IWDPAGFRAGMEDMLSLKLTRPNIQEFVRSNRLRILPEEVYLLVRELRGRNGLPNVGL
                     "
     gene            complement(1315..2580)
                     /locus_tag="VGA78_07910"
     CDS             complement(1315..2580)
                     /locus_tag="VGA78_07910"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9893835.1"
                     /translation="MRQTAPRPILLILLLALVSLVGYTLRSNISIAQEYLAPELGLTM
                     NDMGTITAWGFQLAYAVFQIPAGFLGDRYGARLVLGLAIVTWVIATLGSALVSGAGAA
                     FATLFGVRFLLGVGQAATYPVGAMAIAQAIPPQRRATANAFFISAALLGAALAPLTLA
                     PLMVSFGWRAVFLASAGLGLLTALLWFLLAPSPPSHPETGPGERPSLGAQLRASLALL
                     KDQNLLLLSTGYLLHAAAFFVFIFWFFRYLTEGRGFSVLASGFWGSVPALTAFLLAPL
                     GGLLADRLSRGPAGVRARLRVAIGALLAAALLVMLGANLAAPVPAIAALALSVACFNA
                     TEGPVWATATALGSASPGAAGGILNFMGNVGGIISIWAVPRMKDAWGWTTMLGIWAGV
                     AVVAALLWSLVRTEPTRLQPHVGEPVSSA"
     gene            2635..>3705
                     /locus_tag="VGA78_07915"
     CDS             2635..>3705
                     /locus_tag="VGA78_07915"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9893836.1"
                     /translation="MTRTIVVGAGIIGLACAYALRKRGREVLVIDQAQPGAACSSGNA
                     GWIVPSLSGPLPGPGLTRTSLQYILRRDSPLYIAPRAAPGLARWLWRFWRCCNRRDFR
                     RGLDAVANLNRRTLSQFDQLERDGLSFELHRNGLLFVFLDPGHMRATLADFEHYRSFG
                     YEDPRPLDGSALRELEPVLSDEVNSGFLVPNEYHVRPETLTAAYLAGLGSLQVPIQTG
                     VAVLGPAGRSGRSALLETSAGPIAGDEILITAGAWSGRLAERFGIRLPVQAGKGYSIT
                     LDGNAPPITRPLYLGEARVGCSPFQGAVRFAGTMELSGINTVLDRRRVVGMRKGIARY
                     LRTPVAPDDGIEWVGMRPLTPDG"
BASE COUNT          624 a         1208 c         1320 g          553 t
ORIGIN      
        1 ggctacgccg acgtagccag gaagaccccg atgacgcccg ccacggtgat gcactcgggg
       61 tcgatgggca agacctacac tggcaccgcg gtcatgcagc tggtggagcg cggggtgctc
      121 tcgctgcatg acccgatcaa ccagtacctc aagggcttca aggcggtcaa tccgctgggc
      181 gagcgcgaga tcaccgtgca cgatctcctg acccaccaga gcggcctggc tggaaacgac
      241 gccggctccg atttcctgcc gcccaggccg ttgcaggaac atgtcaggga gggctacggc
      301 cagagcacgt tcgggagcta tgccggtacg gttccccgct ggggcgccaa ggtgggcgag
      361 aagttcatct actcgaactt cggtttggcg acgctggggt atctggtcga ggtgaccaat
      421 cccgagggcc tgagcttctc ggagtacgtc cagaagcacg tcatggaccc gctgggcatg
      481 acatcgagcc agtatccgcc ggtgcaggac gccaggcacg tgcggcccga gatcttcgcc
      541 cggatgtcta ccgggtatgc gctcctgggc acggtacgca ttcctacccc gaccatttat
      601 ttcgcggacc atccggccgg gacggtggtg accacgccgg gcgaccacat caagttgctg
      661 ctggcgtacc tcaaccgggg ttcctacaac ggctatcagc tgctcaagcc ggagacggtg
      721 caggcgatgc tcacgcccca gagtacgcgc gacgcgcgcc aggtagggct catctggatg
      781 ctcggcaacc agggcaagcc ggattcctgg ttcggccacg gcggtgccca catgttcggc
      841 tggcacaacg attttcgggc ctacccggaa caggactttg ccgtcgccgt ggccaccaat
      901 gcctgggaca tggtgctctg gggcgacgcg acctggcgac cggcgtactg gttgattgag
      961 gatttcattt cctcctggat cacgcgggag aaggccggga cgctgcgcgc ggttccccgg
     1021 cagacgtggg cctggaagac gtcctatgtg atcggactca caatggcgga gcagctcaag
     1081 gggctgctgg cgatcaccag cccactgaca ccggccatga tcgacaccct ggcccgacag
     1141 ggggaggagt attcaccggc ggccgggagc aagcggatct gggacccggc cgggttccgg
     1201 gccggcatgg aggacatgct gagcctgaag ctgacccggc ctaacatcca ggagttcgtg
     1261 cgttccaacc ggctgcgcat tctgccggaa gaagtctatc tgctggtgcg cgagttacgc
     1321 ggaagaaacg ggctccccaa cgtggggctg taggcgggtg ggttcggttc gtaccaggga
     1381 ccagagcagc gcggccacga cggcgacgcc ggcccagata ccgagcatcg tggtccagcc
     1441 ccaggcgtct ttcatccggg gcaccgccca gatcgagatg atgccgccca cgttgcccat
     1501 gaaattgagg atcccgccgg ccgcgccggg actggccgac cccagcgcgg tggcggtcgc
     1561 ccagaccggc ccctcggtgg cgttgaagca agccaccgac agggccagcg cggcgatggc
     1621 gggcacgggc gccgccagat tggcgccgag catcaccagc agggcggcgg cgagcagggc
     1681 accgatcgcg acccggagcc gggcccggac gccggccggg ccgcgactca accggtccgc
     1741 cagcaatccg cctaacgggg cgaggaggaa ggcggtgagg gccgggacgc tgccccagaa
     1801 gccgctggcc agcacgctga atccgcgtcc ttcggtcagg taccggaaga accagaagat
     1861 gaaaacgaag aacgcggccg cgtgcaacag gtacccggtg gaaagcagca gcaggttctg
     1921 gtccttgagc agcgccaggg acgcgcgcag ctgagccccc aatgacgggc gctcaccggg
     1981 gccggtctcg gggtggctcg gtggggaggg ggccagcagg aaccagagca gggcggtgag
     2041 caggcccaag cccgcgctgg cgaggaagac cgcccgccag ccgaacgaca ccatgagcgg
     2101 cgccagggtc aggggggcca gggcggcccc cagcagcgcc gcggaaatga agaaggcgtt
     2161 ggcggtggcg cgacgctggg gtgggatggc ctgggcaatc gccatggccc cgacgggata
     2221 ggtggcggcc tgacccacgc ctaacaggaa ccggaccccg aacagggtgg cgaacgccgc
     2281 gcccgcgccg ctgaccagag ccgagccgag cgtggcgatg acccaggtca cgatggcgag
     2341 tccgagtacc aggcgggccc cgtagcggtc gcccagaaac ccggcgggaa tctggaagac
     2401 ggcgtaggcg agctggaacc cccacgcggt gatggtgccc atgtcgttca tggtgagacc
     2461 cagctcgggg gccagatact cctgggcgat ggagatgttg ctgcggaggg tgtagccgac
     2521 caggctcacc agagcgagga gcaggatgag gaggatcggt cgcggggccg tctgtcgcat
     2581 cgccaggccg gtcgataggt cggcccaaag tgcgtctccc aacggaccgg cgcaatgacc
     2641 cggaccatcg tcgtcggggc cggcatcatc ggtttggcgt gtgcctacgc gctccggaag
     2701 cgcgggcggg aggtgctggt gatcgatcag gcccaaccgg gagcggcctg ctccagcggc
     2761 aatgccggat ggatcgtccc ctcgctctcc gggccgcttc ccgggcccgg actgacccgg
     2821 acctcgctcc agtacatact ccggcgggac agcccgctct acatcgctcc ccgggccgcg
     2881 cccggtctcg cccgatggct gtggcgcttc tggcgttgct gcaaccggcg ggactttcgt
     2941 cggggactgg acgccgtggc caatctcaac cggcgaaccc tgagccagtt cgaccagctg
     3001 gagcgcgatg gcctctcgtt cgagttgcat cgcaacgggc tgctgttcgt gtttctcgac
     3061 cccggccaca tgcgggccac gctggccgac ttcgagcatt atcggtcctt tggctacgag
     3121 gacccgcggc cgctcgacgg gagcgccctg cgggagctgg agccggtcct ctccgacgag
     3181 gtgaacagcg gcttcctcgt ccccaatgag taccacgttc ggccggagac gctgaccgcc
     3241 gcctacctgg ccggcctggg ctccctgcag gttcccatcc agaccggggt cgcggtcctg
     3301 ggcccggctg gtcgatcggg ccggtccgct ctgctcgaga cgtctgccgg tcccatcgcg
     3361 ggcgatgaga tcctgatcac ggcgggcgcc tggtccggcc gactggccga gcgcttcggg
     3421 atccggttgc cggttcaggc gggcaagggc tacagcatca ccctcgatgg gaacgcgccg
     3481 ccgatcaccc ggccgttgta tctgggggag gcccgggtgg gttgttctcc gtttcagggc
     3541 gccgtccggt ttgccgggac catggagctg tcgggcatca acaccgtcct cgatcgccgg
     3601 cgggtggtcg ggatgcggaa gggcatcgcg cgctacctgc ggactccggt tgcacccgat
     3661 gacgggatcg agtgggtcgg catgcggcct ctcacgcccg atggg
//
LOCUS       DASWKS010000275         2782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_874032, whole genome shotgun sequence.
ACCESSION   DASWKS010000275 DASWKS010000000
VERSION     DASWKS010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874032"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1070
                     /locus_tag="VGA78_07920"
     CDS             48..1070
                     /locus_tag="VGA78_07920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9893837.1"
                     /translation="MRWVTGLRGGWRGMQAVFGEGIAMMGRRPSPLGVLPALLTSSQD
                     VIVSANWIWPTAYGVHLARRLRRFRLVGFPIFHIARPWAEQLLYHEMLAACDAVLTLT
                     DAEQQFVQARCRGRVEVTGAGVDPAPFVRRDGGAVRRLHNLGDGPVVGFIGRQDPLKG
                     VLTLLEAMRLVWQARPEVRLLLGGPRAHRSREVSAALESLPAEHRPQLVDLSDFADRD
                     GPSIIDACDVVALPSVEESFGLVFLEAWMCRKPVVGVRIPSTECVIEDGQDGLLARPM
                     DPADLARCLLELLGDPGRAGMLGERGYRKTLARFTWDAVVDRWEAVLREVVEGSRRGS
                     KGVEEG"
     gene            1161..2519
                     /locus_tag="VGA78_07925"
     CDS             1161..2519
                     /locus_tag="VGA78_07925"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX9893838.1"
                     /translation="MPATATLAELELELLTQYRGKTRRSRELHARASQVMPGGDTRTG
                     TFHPPYPLVMAWGDGCRLGDEDGNEYFDFLGNFTSLIHGHAPARVNAAIQDQLRRGSA
                     HGSPTALMTVLAERLTTRVPSVERVRFCNSGTEAAMFAIRAARAYTGRALIVKMEGGY
                     HGSYDPVQVALSGRYGESDGLGLSPGAVGEVIAIPFNDLDQARLALERHRAEVAAVIV
                     EPVMVAAGIIPAEPEFLHGLRQVTGDIGALLICDEVATLRLDWGGAQQRYGITPDLTC
                     FGKIIGGGLPAGAFGGRADVMAVYDPTGPGTIAHSGTYNGNALAMAAGIATLDLYPPP
                     VVQQLNQAGDELRGRLQAACDRAGLPASLTGLGSLIGFHPVRGPVRNAHQSAGADRRI
                     IRALHLALLLRGIFSASRQMYVLSTAMLDDTAEPIARFESVFEEAVGMIADAARGEGT
                     VS"
     gene            2516..>2782
                     /locus_tag="VGA78_07930"
     CDS             2516..>2782
                     /locus_tag="VGA78_07930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893839.1"
                     /translation="MSRRALRAAGRPPWWADGVRFECQETGRCCVSRDAYGYVYLTLE
                     DRRRLAKHLRLTTLQFTRRHCRKTDGYFHLKDTSGPCRFLDGKRC"
BASE COUNT          419 a          896 c          974 g          493 t
ORIGIN      
        1 gggtccgggt tagacgagtc tcccctgaca acgcggtgag gagaggggtg cgatgggtaa
       61 ccgggttacg cggagggtgg cggggcatgc aggcggtgtt cggcgaaggt atcgccatga
      121 tggggcgtcg tccgagcccg ctcggcgttc tcccggcgct gctgacgtcc tcccaggatg
      181 tcatcgtctc ggccaactgg atctggccca cggcctatgg ggtgcacctg gcgcgccggc
      241 tgcgtcgctt ccggctggtc ggttttccca tttttcacat cgcgcgtccc tgggcggagc
      301 aactcctcta tcacgagatg ctggcggcct gcgacgcggt gctgaccctg accgatgccg
      361 agcagcaatt cgtacaggcc cgctgccggg gccgggtcga agtcaccggt gccggggtgg
      421 acccggcgcc gtttgtccga cgcgacggcg gagcggtgcg aagactccac aacttgggcg
      481 atggtcccgt cgtcggcttc atcggacgac aggacccgct caagggtgtt ctcacgctcc
      541 tcgaggcaat gcggctggtc tggcaggcgc gaccggaagt caggttgttg ctgggcggcc
      601 cacgggctca tcggtcccgg gaggtcagcg cggcgctgga gtcgctgccc gccgaacacc
      661 gccctcagct ggtcgatcta tcggacttcg ccgaccggga cggtccctcg atcatcgacg
      721 cctgtgatgt ggtggccctc ccttcggtcg aggaatcctt cggcctggtg tttctcgaag
      781 cctggatgtg ccgcaaaccg gtggtgggag tcaggattcc ttcgaccgaa tgtgtcatcg
      841 aagacggcca ggacggtctt ctggcccggc ctatggaccc ggcggacctg gcccgctgcc
      901 tgctcgaatt gctcggcgat ccgggccgcg ccgggatgct gggcgaacgg gggtatcgga
      961 agacgctggc ccgattcacc tgggatgccg tcgtggaccg ctgggaagcg gtgcttcggg
     1021 aagtggtcga aggcagtcga agggggtcga agggggtcga ggagggttga tgaggcgtac
     1081 ccgcttcgac cgtcttccac tgccttcgac ccccttcgac tactccattg cgagtatctt
     1141 cgacacggca aggagccctc atgccagcca ccgcgacgct cgccgaactg gaactggaac
     1201 tgctgaccca gtatcgcggg aagacccgtc gatcccggga gctgcacgcg cgggcttcgc
     1261 aggtcatgcc cggtggtgac acccggaccg ggaccttcca tccaccgtat ccgctggtga
     1321 tggcctgggg tgatggctgc cgactgggag atgaagacgg caacgagtac ttcgacttcc
     1381 tgggcaattt cacctcgctg attcatggcc atgcccccgc gcgggtcaac gccgccatcc
     1441 aggatcagct ccggcggggc tcggcccacg gttcacccac ggcgctcatg accgtgctgg
     1501 cggaacgact cacgaccaga gtgccttcgg tcgagcgagt ccggttctgc aattcgggca
     1561 ccgaagccgc gatgttcgcg atccgtgcgg cgcgggcgta caccggccgc gcgctcatcg
     1621 tcaagatgga aggcggttat cacgggtcgt atgatccggt gcaggtggcg ttgtcgggtc
     1681 gttacggcga gtcggatggc ttggggttgt cgccgggggc ggtgggggag gtgatcgcca
     1741 tcccgttcaa cgatctcgat caggcccggc tcgcgctgga gcgacaccgt gccgaggtcg
     1801 ccgcggtgat cgtggaaccg gtgatggtcg ccgcggggat catcccggcg gaacctgagt
     1861 ttctccacgg cctccggcag gtcaccggcg acattggagc cctgctcatc tgcgacgagg
     1921 tcgcgaccct gcgactcgac tggggtggag cgcagcagcg ctacgggatt actcccgacc
     1981 tgacctgctt cggcaagatc attggaggcg gcctcccggc cggcgcgttc gggggccggg
     2041 ccgacgtgat ggcggtctac gacccgaccg gtcccggaac catcgcccac tccggcacct
     2101 acaatggcaa cgcgctcgcg atggccgccg ggatcgcgac cctggatctc tatccccctc
     2161 cagtggtgca gcagctgaac caggcgggcg acgagctcag agggcgattg caggcggcat
     2221 gcgaccgggc gggactgccg gcgagcctga ccggcctggg ctcgctgatc gggttccacc
     2281 cggttcgggg cccggtccga aacgcgcacc agagtgccgg cgccgaccgg cgaatcattc
     2341 gggccctcca cctggcgctg ctgctgcgcg ggatcttcag cgcgtcccgt cagatgtacg
     2401 tcctgtccac cgcgatgctg gacgacacgg ctgaacccat cgcccggttc gaaagcgtat
     2461 tcgaggaggc cgtcggcatg atcgcggatg ccgcccgcgg cgaggggacg gtctcgtgag
     2521 tcgcagagcc ctccgtgcgg ccggccggcc gccctggtgg gccgatgggg tccggttcga
     2581 atgccaggag accggccgct gctgtgtctc ccgggacgcg tatggctacg tctacctgac
     2641 cctggaggat cgccgtcggc tggcgaaaca cctgcggctc actacgctgc agttcacccg
     2701 ccgtcactgc cgcaagaccg atgggtactt tcacctgaaa gacacatcgg gtccctgcag
     2761 gtttctggat ggcaaacgtt gc
//
LOCUS       DASWKS010000276         4569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3111457, whole genome shotgun sequence.
ACCESSION   DASWKS010000276 DASWKS010000000
VERSION     DASWKS010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4569
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3111457"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(276..3458)
                     /gene="secA"
                     /locus_tag="VGA78_07935"
     CDS             complement(276..3458)
                     /gene="secA"
                     /locus_tag="VGA78_07935"
                     /inference="COORDINATES: protein motif:HMM:NF009538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX9893840.1"
                     /translation="MMKQLLSALIGSRHVREMKKLQPIVEEIHRHEARLKDLPDDEIR
                     TQTARFRERIRELVGPAKDELEQVRSAKHGCADPAERERLEDRFHQLERDYKKAMADA
                     LDQLLPEAFATVREASRRLLGSTVMVTGHELGWDMVPYDVQLLGGIVLHRGRIAEMAT
                     GEGKTLVATLPLYLNALPGHGAHLVTVNNYLARRDSQWMGHLFIWLGLTVGCIDDTEP
                     SSPQRRAAYLADITYGTNNEFGFDYLRDNMVFALEQRVQRDHWYAIVDEVDSILVDEA
                     RTPLIISGPVGHAEDDKYAQFNRQVSELVRKQTSVVNTLIGDAERMQQDSKLPEEAAV
                     KLFQAQLGMPKNKRLLKLLNEPGVKVAVQKMELSYIGDRKLPTKQQQHRDLEEALYFV
                     LDEKGHSVHLTDQGHHALSPDDPDLFVVPDISEVIHRIEKDPELSPADRLARRREVEG
                     EYAAKSEKLHIIHKLLQAHALYEKDVEYLVQDNQVLIVDEYTGRVLPGRRWADGLHQA
                     VEAKEGVTVKGETQTLATITIQNYFRMFDKLAGMTGTAETEEQEFYSIYGLEVNVIPT
                     NKPVRRADRPDRIYRTRREKYNAVVDEVERLHNVGLPVLIGTTSVDVSETLSKMLRRS
                     GLKHEVLNAKYHQREAEIVAGAGQSGAVTIATNMAGRGTDIKLGPGVTETRHWKEKDG
                     DKEREVEELGGLHIVGTERHESRRIDRQLRGRSGRQGDPGATLFFLSLEDDLMRLFGT
                     DRIARYMEKSGAEEGEVITGKLVTAAIESAQKRVELQNFQQRKRLLEYDDVMNQQREV
                     VYSLRLFALERGEEIKAEARRMIAAALQHLVEKQLEGVERSEDWDRAALHAALQLTFL
                     LICDPVLDPAATPDQASLTRRVLEEGEAAFTRKELYLRDFGGTIGISDVDVQVLSQVM
                     LSTLDEKWKDHLYDLDQLRNAIQYRAYGQKDPLVEYKKEAFEMFEDLMRDMQATFSER
                     YLKVQVTAEPPRPMPPPRTQTSAPTAGADDLFTGPMSPSPTAPARPSTVSTSLGRMPT
                     GPGSVPVVGRNDPCPCGSGKKYKKCHGPGM"
     gene            complement(3522..4082)
                     /gene="nadD"
                     /locus_tag="VGA78_07940"
     CDS             complement(3522..4082)
                     /gene="nadD"
                     /locus_tag="VGA78_07940"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEX9893841.1"
                     /translation="MRIGLLGGSFDPVHHGHLLAARALRETLELDQVRLIPAAQQPFK
                     TAGHGASPAHRAAMVELAVTGEEGLALDRSEVDRPGPSYTVDTLEGFRARWPDARLTL
                     LLGADTAAEFPSWREPDRIRSLAEVVIFRRDGPAAPAGHQAVVGIPRVDISATEIRAR
                     VRAGRSIRFLVPEPVADYIAEHGLYR"
     gene            complement(4084..>4569)
                     /gene="bamD"
                     /locus_tag="VGA78_07945"
     CDS             complement(4084..>4569)
                     /gene="bamD"
                     /locus_tag="VGA78_07945"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX9893842.1"
                     /translation="EFRRTADEGGADSLAADALLRAGDAYAELWRRPELDPTYGETAL
                     QTYREVQQRYDGSLAASRATTRIQQLQELFAAKEYRTALFYYRLKAYDSAILSLRNVI
                     ATYPRTQVVPDALVKLVESYRKVLYQEDLRETCQYIARFFPDTSPRVTSLCPETPAGA
                     F"
BASE COUNT          693 a         1590 c         1448 g          838 t
ORIGIN      
        1 acggccggtc ccaccgacca gagccgctct ctgggcagat ccgcggcaca acgggtttcc
       61 cggagggtgg aaggcatcgc ctccaatgtg cgggacgagc cgccgtcgat ccaaccacga
      121 cgcggcgaga ggaaaccgga aaatgcgacg ggagaggggg ggagtcactg cagaatgccg
      181 agtgcccaat gcccatggca cagggggtca ccctctgcat tgggcattcc gcattcggca
      241 ctccgcattg attcccccct cacacccccc ccttcctaca tccccgggcc atggcatttc
      301 ttatacttct tccctgaccc gcagggacag ggatcgttcc tcccgacgac cggcaccgat
      361 ccaggtccag tcggcatccg acccagggaa gtggacacgg tgctgggccg ggccggagcc
      421 gtgggggacg ggctcatcgg tccggtaaac aggtcgtcgg cgccggcggt cggcgccgag
      481 gtctgggtcc gcggcggcgg catcggacgg ggcggctcgg ccgtcacctg caccttgagg
      541 tagcgttcgc tgaaggtggc ctgcatgtcc cgcatgaggt cttcgaacat ctcgaaggcc
      601 tccttcttgt actcgaccag cgggtccttc tggccgtagg cccggtactg gatggcgttg
      661 cggagctggt ccagatcgta gaggtggtcc ttccacttct cgtccagggt cgacaacatc
      721 acctgcgaca gcacctggac gtccacgtcc gagatcccga tggtgccccc gaaatcgcgc
      781 aggtacagtt ccttccgggt gaaggccgcc tcgccctcct ccagcacccg ccgggtcagg
      841 gaggcctgat ccggagtcgc ggccgggtcc agcaccggat cacagatcag caggaaggtg
      901 agctgcaggg ccgcgtgcaa cgcggcccgg tcccaatcct cggagcgctc gacgccttcg
      961 agctgctttt ccaccaggtg ctgcagcgcg gccgcgatca tgcgccgtgc ttcggccttg
     1021 atctcctcgc cccgttccag cgcaaacagc cgcagcgaat agaccacttc ccgctgctgg
     1081 ttcatcacgt cgtcgtattc cagcagccgt ttccgctgct ggaagttctg cagctcgacc
     1141 cgcttctggg ccgactcgat cgccgcggtc accagcttgc cggtaatgac ctcgccttcc
     1201 tcggcgccgc tcttctccat ataccgggcg atgcggtcgg tgccgaacag ccgcatcagg
     1261 tcgtcttcca gcgacaggaa aaagagggtg gccccgggat cgccctgacg accggaccgg
     1321 cccctcagct gccggtcgat ccggcgcgac tcgtgccgct cggtgccgac gatgtggagg
     1381 ccccccagtt cctcgacctc gcgctccttg tcaccgtcct tctccttcca gtgccgggtc
     1441 tcggtgacgc cggggccgag tttgatgtcg gtgccacgcc cggccatgtt ggtcgcgatg
     1501 gtcaccgcgc cgctctgccc ggccccggcc acgatttccg cctcgcgctg gtgatacttg
     1561 gcgttcaaca cctcgtgctt gagcccgctg cgccgcagca tcttggacag ggtttccgac
     1621 acatccaccg aggtggtgcc gatcagcacc ggtaatccca cgttgtggag ccgttccacc
     1681 tcatccacca ccgcgttgta tttctcccgc cgggtccggt agatccggtc ggggcggtcg
     1741 gcccggcgga ccggtttgtt ggtgggaatg acgttcacct cgagaccata gatggagtag
     1801 aactcctgtt cttcggtctc cgcggtgccg gtcatgccgg ccagcttgtc gaacatgcgg
     1861 aagtagttct ggatcgtgat ggtggcgagg gtctgggtct cgcccttcac cgtcacgcct
     1921 tccttggcct ccaccgcctg gtgcagtccg tcggcccagc gccgtcccgg caggacccgc
     1981 ccggtgtact cgtccacgat caggacctgg ttgtcctgca ccaggtactc cacgtccttt
     2041 tcgtagaggg catgggcctg cagcagcttg tggatgatgt ggagcttctc gctcttggcc
     2101 gcgtactcgc cctcgacctc ccggcgccgc gccagccggt ccgccggcga gagctcgggg
     2161 tccttttcga tccggtggat cacttcggag atgtccggca ccacgaacag atccggatcg
     2221 tccggcgaca gcgcgtgatg gccctggtcg gtgagatgga ccgagtgccc cttctcgtcc
     2281 agcacgaagt agagcgcctc ttccagatcg cggtgctgct gctgcttggt ggggagcttg
     2341 cggtccccga tgtacgacag ctccatcttc tggaccgcca ccttgacgcc cggctcgttg
     2401 aggagcttga gcagccgctt gttcttgggc atccccagct gagcctgaaa cagcttgacc
     2461 gctgcttcct cgggcagctt gctgtcctgc tgcatccgtt cggcatcgcc gatgagggta
     2521 ttcaccacgc tggtctgctt ccgcaccagc tccgacacct ggcggttgaa ctgggcgtac
     2581 ttgtcgtctt cggcatggcc caccgggccg gagatgatga gcggggtccg ggcctcgtcc
     2641 accaggatcg agtccacctc gtccacgatg gcgtaccagt ggtcccgctg cacccgctgc
     2701 tccagcgcaa acaccatgtt gtcgcgcagg tagtcgaagc cgaattcgtt attggtcccg
     2761 taggtgatgt cggccagata agcggcccgg cgctggggcg agctgggctc ggtatcgtcg
     2821 atgcatccga ccgtcaggcc caaccagatg aacaagtggc ccatccactg cgagtcacgc
     2881 cgggccaggt agttgttgac cgtgaccagg tgagccccgt ggcccggcag ggcgttgagg
     2941 tagagcggca gggtcgcgac cagggtcttg ccttcaccgg tggccatttc cgcgatgcgt
     3001 ccccggtgca gcacgatgcc gcccagcagc tggacgtcgt agggcaccat gtcccagccg
     3061 agctcatgcc cggttaccat caccgtgctg ccgagcagcc ggcgggacgc ctcccgcacc
     3121 gtggcaaagg cctccggcag gagctggtcc agtgcgtccg ccatggcctt cttgtagtcg
     3181 cgctccagct ggtggaaccg gtcctccagc cgctcccgtt ccgccggatc ggcgcacccg
     3241 tgcttggcgc tccgcacctg ctccagctcg tccttggccg gccccaccaa ttcccggatc
     3301 cgttcccgga accgggccgt ctgggtccgg atctcgtcgt cgggcaggtc cttcagccgt
     3361 gcctcgtggc gatggatctc ctccacgatc ggctggagct tcttcatctc ccgaacgtgg
     3421 cgggaaccga tcaacgccga caacagctgc ttcatcatgc gtcgttcact ctcagtcctc
     3481 aggattcgct cggtacttgg tcctcagtac tcagtacttg ttcaacggta caacccgtgc
     3541 tcggcgatgt agtccgccac cggctcgggc accagaaacc ggatcgaccg cccggcgcgc
     3601 acccgagccc ggatctcggt cgcggagatg tccacccggg gaatcccgac caccgcctgg
     3661 tgccccgccg gcgcggccgg gccgtcccgg cggaagatca cgacctcggc cagcgaccgg
     3721 atccggtcgg gctcgcgcca ggacggaaac tcggccgccg tatcggcgcc taacagcagg
     3781 gtcagccggg catcgggcca gcgggcccgg aacccctcca gcgtatcgac cgtgtacgac
     3841 ggcccgggcc ggtccacctc cgaccggtcg agcgccagac cttcttctcc cgtcacggcc
     3901 agctccacca tcgcggcccg gtgcgcgggg ctcgccccat gtccggcggt tttgaacggc
     3961 tgttgcgccg ccgggatcag gcgcacctgg tcgagctcca gggtctcgcg cagcgcccgc
     4021 gccgccagca gatgaccgtg gtgaaccgga tcgaacgacc cgcccagcag accgatccgc
     4081 acgtcaaaag gctccggcgg gtgtctccgg gcagaggctg gttacccgag gcgaggtgtc
     4141 cgggaagaac cgggcgatat actggcaggt ctcccgcaga tcctcttggt agagcacctt
     4201 gcggtaggat tcgaccagct tgaccagcgc gtccgggacg acctgagtgc ggggataggt
     4261 cgcgatcacg ttccgcaagg acaagatcgc ggaatcgtag gccttgaggc ggtaatagaa
     4321 caacgccgtc cggtactcct tcgcggcgaa cagttcctgc agctgctgga tccgggtggt
     4381 cgcacggctc gccgccagcg agccatcgta gcgctgctgc acctcgcgat aggtctggag
     4441 tgccgtctcg ccataggtgg gatcgagctc ggggcggcgc cacagctccg cgtacgcgtc
     4501 accggcccgg agcagtgcat cggcggccag cgaatccgcc ccgccttcgt cggcggtccg
     4561 gcgaaactc
//
LOCUS       DASWKS010000277         5546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3448787, whole genome shotgun sequence.
ACCESSION   DASWKS010000277 DASWKS010000000
VERSION     DASWKS010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5546
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3448787"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="VGA78_07950"
     CDS             complement(<1..771)
                     /locus_tag="VGA78_07950"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEX9893843.1"
                     /translation="MTGCLLVAAMVTIGGITRLTGSGLSITEWDVVVGTLPPLSETAW
                     QDLFAKYQATPQYHLVNAHFGLTEFKRIFWWEYVHRLLGRAIGLVFLIPFLYFLLKDY
                     FDRSLWNRVLLILGLGAFQGLLGWLMVASGLVDRPAVSHYRLAAHLLTALLTFGVTLW
                     VALGLTGGRTDGPTDRRTDRLTTGLRMAVRGFALLLGLQLLYGAFVAGLRAGGMFNTF
                     PLMGGALVPAGLGVLSPGWRNFTENPVAVQFIHRLLGIA"
     gene            940..1812
                     /locus_tag="VGA78_07955"
     CDS             940..1812
                     /locus_tag="VGA78_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893844.1"
                     /translation="MRVTPALLLLIATAAPAAAQSEEHLRVFFEGKRVVVRIEMPGTE
                     NGVDVYPGTSQPVDFPRHATRLKRFGTSIRPGEEVLVTKVKVKKDLVEFQLGGGGYGT
                     FGDDDSDISVPLAEKTEREKNLEKEIERTSDSARRHRLREELDELRKERQREDARNQA
                     EAAQAQQAKEANIRQRRAEGGSRFNLRYRPSVPLEVLTPDGIMEALAEYVDFSPVLAE
                     RPGPDPAESSPGELRKGLTVEEVDALLGRPEAISQRQEGTLTVSTSVYRTRDRRISAE
                     FIEGVLIRFTITSP"
     gene            complement(1867..1939)
                     /locus_tag="VGA78_07960"
     tRNA            complement(1867..1939)
                     /locus_tag="VGA78_07960"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1904..1906),aa:Gly,seq:ccc)
     gene            complement(2038..3453)
                     /locus_tag="VGA78_07965"
     CDS             complement(2038..3453)
                     /locus_tag="VGA78_07965"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893845.1"
                     /translation="MRLQRKAAVGLLLVTSAAPLAAQRTDRLMTDSAGKFQIAFCNLR
                     MAGKVGDGQKALKTGIEEKDRTKRLAALDNAERILIEQINTGQGQTAAAWYYLGRTYL
                     LKGDVAGADSALAKAVELQADCEIDVNSYRQNAWALLANAGIEKLKANDQDSALVLFR
                     QASTIFAQLPHVFENMGVIFANAGQQDSAAFYFGKAAQVAEADTSLVENRNSATLNQA
                     MTLQRMEKHAEAIQVLQKYLGWNPKDTDARKSLSWSYRQSGQVAKADSLDQAMVNEFA
                     TMNYDSLSTADLMAVGVSMFNAKKYEEAAKVFERLMAQNPWSRDAVYNLANTYLATKQ
                     WEKLAETGKRLIEIEPLSEDAYRLTSQALRELKQQDLLLKVAETFVALPVGIDVTAFS
                     MGQQTSRLQATATGRKASDAAGKDLKPVPVQVTVEFLDEKGQVLGTQDVSIPALEAGA
                     THEVKAEVRSPGVAAWRYKRK"
     gene            complement(3573..4832)
                     /gene="larC"
                     /locus_tag="VGA78_07970"
     CDS             complement(3573..4832)
                     /gene="larC"
                     /locus_tag="VGA78_07970"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HEX9893846.1"
                     /translation="MSSRTFAIIDPAAGISGDMLLGALLEAGAPRDWLVGLPRRLGIP
                     DLSIRIEDVERCGIRCAKVTVCLPGGEVEGAGIPHSPIHDHVQHSDASESSSHSHRHV
                     GDLIAMIERAELSSWVRERAIRAFERLGEAEGAVHGLPAHDVPLHEVGAWDALVDIVG
                     GIEGFEQLGITQVYTRPVALGDGWVRSAHGQIPVPAPATALLLEGLAVGPNGPVRGEA
                     TTPTGAALLAVLTEGAPPPHWRPVRSGWGAGTRNPAEYPNALRLILAERVAESALVSV
                     LSIDLDDLSPEYLEPLREAISAAGAVDVQSWPTQAKKGRIGFRLDIVVPRGLEAAVAD
                     ACFRHSTTAGVRWVEAERLTLPRRQHEVRIEGQLVRVKVLETPAGIRVKPEYDDVTRV
                     AQLTGRAALDVATQARKLAIELLSTED"
     gene            complement(5010..>5546)
                     /locus_tag="VGA78_07975"
     CDS             complement(5010..>5546)
                     /locus_tag="VGA78_07975"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9893847.1"
                     /translation="EPYRIEGKKTLGLEIALQLGWRLPHAVIYPTGGGTGLIGMWKAF
                     QELKAAGWVEGDLPRMFTVQSSGCAPIVRAFEAGDDSATAWADPWTVASGLRVPGPLG
                     DRIMLRTLRDSEGGAVAVDDDKLCSAAKYATALEGIDFCPEGGAAIAAAAALKSLGQL
                     APDQTVVLFNTGAGWLYR"
BASE COUNT          951 a         1848 c         1805 g          942 t
ORIGIN      
        1 agcgattccg agcagccggt gaatgaattg caccgcgacc ggattctcgg tgaagtttct
       61 ccacccgggt gaaaggaccc ccagtcccgc cgggaccagc gcgccgccca tcaagggaaa
      121 ggtgttgaac atccccccgg cccggagtcc tgcgacgaag gcgccgtata ggagttgcag
      181 ccccagcaac aacgcgaagc cgcggaccgc cattcgaagc ccggtcgtaa ggcggtcggt
      241 ccgtcggtcc gtcggtccgt cggtccgtcc gcccgtcagt cccagtgcca cccaaagcgt
      301 cactccgaac gtcagcaggg ccgtgagcag gtgggccgcc agccggtaat gactcacggc
      361 gggtcggtcc accagcccgc tcgcgaccat caaccacccg agcagaccct ggaaggcgcc
      421 caggccgagg atcagcagca cccggttcca gagtgaccgg tcgaagtagt ccttgagcag
      481 gaagtagagg aacgggatca gaaaaaccag gccgatcgcc cgacccaaca ggcggtggac
      541 gtactcccac cagaagatcc gcttgaactc agtgagtccg aaatgggcgt tcaccaggtg
      601 gtactggggg gtcgcctgat acttggcgaa gaggtcctgc caggcggtct cggagagagg
      661 cggcagcgtg cccaccacca catcccactc ggtgatcgag agccccgagc cggtcagccg
      721 ggttatcccg ccaatggtta ccatggcggc aacgagcagg cacccggtca acagccaggt
      781 cctgacggct cctacggttt gtcgcaccat agggtcgaaa atactcacct gcgtcgtcgg
      841 gggcctttca gggacggccc gggggcgctt gattccgatt acccattcca accgttgtgc
      901 cttgccatgt caggcttgaa atcgctaccg gagtcgcgca tgcgcgtcac ccctgctctg
      961 ctgttgctga tcgcgaccgc cgcgccggcg gcggcgcaat ccgaggagca cctccgagtc
     1021 tttttcgaag ggaagcgagt tgtggtccgg attgagatgc cgggcacgga gaacggagtc
     1081 gacgtctatc caggaacctc gcaaccggtc gatttccccc ggcacgccac ccgtctcaag
     1141 cgattcggga cctcgatcag gccgggcgag gaggtgctgg taaccaaggt gaaggtcaag
     1201 aaggacctgg tcgagttcca gctcggcggc ggagggtacg ggacgttcgg tgacgacgac
     1261 agcgatatct ccgtcccgct ggccgagaaa accgagcggg aaaagaatct cgagaaggag
     1321 atcgagcgga cctcggattc ggcccggcgg caccggctcc gggaagagct cgacgagctt
     1381 cggaaggagc ggcagcgaga agacgcccgc aaccaggccg aagcagccca ggcccagcag
     1441 gccaaggagg cgaatatccg ccagcgcagg gccgaaggcg gatcgcggtt caatctccgg
     1501 taccggccct cggtgcccct ggaagtcctt actcccgacg gcatcatgga ggcgctggcg
     1561 gaatacgtgg atttctcccc ggtgctcgcc gagcgcccgg ggccggaccc ggccgagtcg
     1621 tcgccgggtg aattgcggaa gggactgact gtcgaggagg tagacgcgct gctgggccgg
     1681 cccgaggcaa tctcccagcg tcaggagggg acgctcacgg tgagcacttc agtgtatcgc
     1741 acccgcgacc ggcgcattag cgcggagttc atcgagggcg tactgatccg gttcacgatc
     1801 acgtcgcctt aagtcagacg gccaccggat cgggtggccg tctgttgttt ggggcaaggg
     1861 ctcgagagcg ggcgaccgga ctcgaaccgg cgacgtccag cttgggaagc tggcattcta
     1921 ccaactgaat tacgcccgca gtgcccggaa cttcactagc gctgcgtggg catgtcaagc
     1981 aggtcggaaa ggtcgtgaaa cgcttccgac ctttctgacg cttccaaccc ttccgaccta
     2041 tttccgctta taccgccagg ccgccactcc cgggctgcgc acttccgcct tcacctcgtg
     2101 ggtcgcaccc gcttccaggg ccgggatgct cacgtcctgg gttcccagca cctggccctt
     2161 ctcatccagg aactccaccg tcacctgcac cggaaccggc ttgaggtcct tccccgccgc
     2221 gtcggaggcc ttgcggccgg tggcggtggc ctgcagtcgg gacgtttgtt gtcccatgct
     2281 gaacgcggtg acatcgatgc cgaccggcaa ggccacgaac gtctccgcga ccttgagcag
     2341 caggtcctgc tgtttgagct cccggagcgc ctggctggtg agccggtagg catcctcact
     2401 cagcggctcg atctcgatca gccgcttccc ggtctcggcc agcttttccc actgcttggt
     2461 cgcgaggtag gtgttggcca ggttgtacac cgcgtcacgg ctccaggggt tctgcgccat
     2521 gagccgctcg aagaccttgg ccgcctcctc gtacttcttg gcgttgaaca tgctcacgcc
     2581 gaccgccatg agatcggcgg tcgacagcga gtcgtagttc atggtggcga actcattcac
     2641 catggcctgg tccagcgaat cggccttggc gacctggccc gactgccggt aggaccacga
     2701 cagcgacttg cgggcatcgg tgtccttggg attccagccg aggtacttct gcagcacctg
     2761 aatggcctcg gcgtgcttct ccatccgctg cagcgtcatg gcctggttga gggtcgccga
     2821 gttgcggttc tccaccagcg aggtgtcggc ttccgccacc tgggcggcct tgccgaaata
     2881 gaaggcggcg ctgtcctgct ggccggcgtt ggcgaagatc acgcccatgt tctcgaagac
     2941 gtggggcaac tgggcgaaga tggtcgacgc ctggcggaac aggaccaggg ccgaatcctg
     3001 gtcgttggcc ttcaacttct cgatcccggc gttggcgagg agcgcccagg cgttctggcg
     3061 gtagctgttg acatcgatct cgcagtcggc ctgcagttcc accgccttgg cgagggcgct
     3121 gtcggccccg gcgacatcac ccttgagcag ataggtccga cccaggtagt accacgcggc
     3181 cgcggtctgg ccctgaccgg tgttgatctg ctctatcagg atccgttcgg cattgtcgag
     3241 ggccgctaga cgcttggtcc ggtccttctc ctcgatcccg gttttcaggg ccttctgccc
     3301 gtcaccgacc ttgccggcca tacggaggtt gcagaaggcg atctggaact tgcccgccga
     3361 atcggtcatg agccgatccg ttcgctgcgc cgccagcggc gcggccgacg tcaccagcag
     3421 cagacccacc gccgccttgc gctgcagtct catcttcact ccttaaaagt aggcgttact
     3481 caccaacaag tactgagtac tgaggactga ggactgagga ctgagtggta ctcagcgccc
     3541 tctgcttcgg atctccactc agtactcagt actcagtcct cagtacttag cagttcgatc
     3601 gccaacttcc tggcctgggt cgcgacatcg agcgcggccc gtccggtgag ctgagccacg
     3661 cgggtcacgt catcgtactc cggcttgacc ctgatgccgg ccggcgtctc cagcaccttg
     3721 acccgtacga gctggccctc aattctgact tcatgctggc gccgaggcag ggtcagccgc
     3781 tcggcctcca cccaccgaac gcccgccgtg gtgctgtgcc ggaaacaggc atcggccacg
     3841 gctgcctcga gcccgcgagg cacgacaata tccagccgga acccgatccg gcccttcttg
     3901 gcctgggtgg gccatgattg tacgtccaca gcgcccgcgg cgctgatcgc ctcgcgcagc
     3961 ggctcgaggt actcgggact cagatcgtcc agatcgatgg agagcacgct caccagggcc
     4021 gattccgcca cccgctccgc caggatcagc ctgagcgcgt tgggatactc ggccggattc
     4081 cgggtgccgg ccccccaccc ggagcgaacc ggccgccagt gcggcggtgg cgctccttcg
     4141 gtcagcaccg ccagaagagc agctccggtc ggcgtggtgg cttcgccccg taccggccca
     4201 ttgggaccga cagccaggcc ctccagcagg agcgcagtcg cgggagcggg gaccgggatc
     4261 tgtccgtgag ccgagcgaac ccagccgtcg cccagggcca cgggacgggt gtaaacctgg
     4321 gtgatgccca gctgctcgaa cccctcaata ccgcccacga tgtccaccag ggcgtcccag
     4381 gccccaacct cgtgcaaggg gacgtcgtgg gccgggagcc cgtgcaccgc gccctcagcc
     4441 tctcccaggc gctcgaaggc ccggatagcc cgctcccgca cccagctgga cagctcggcg
     4501 cgctcgatca tggcgatcag gtcgccgacg tggcgatggg aatgggacga gctctcgctg
     4561 gcgtcggagt gctgaacgtg gtcatggatg gggctgtgag ggatcccggc cccctccacc
     4621 tcgccgccgg gaagacagac ggtgacctta gcgcatcgga taccgcaccg ttccacgtcc
     4681 tcgatccgga tgctcaggtc cggaatgccc aggcgccgtg gaaggccgac cagccagtcc
     4741 cttggcgcac cggcttcgag cagcgcgccc aggagcatgt ccccgctgat gccggcggcc
     4801 gggtcgatga tggcgaaagt gcggctggac atagacttgt aaaactagag gcgcccggca
     4861 ccggtcgcta gtcaatccgg gcggtcggtc agtcggtcgg tcagtcggtc agtcggtcag
     4921 tcggtccggc ggtcagtcgg tcggactgtc ctcaccttga gaggaggcga cggatcgaat
     4981 cgcgaatcga ccgacggacg acggaccgac tatcggtaga gccagccggc tccggtgttg
     5041 aaaagcacca ccgtctggtc cggggcgagc tgccccagtg atttgagggc ggccgccgcg
     5101 gcgatggcgg ccccgccttc ggggcagaag tcgatcccct ccagggcggt ggcgtacttg
     5161 gccgcgctgc agagcttgtc gtcgtcgacg gccaccgcgc cgccctcgct gtcgcgcagg
     5221 gtgcgcagca tgatccggtc gcccagcggc cccggcaccc ggagtccgct ggccacggtc
     5281 cagggatcgg cccaggcggt ggcgctgtcg tcgccggctt cgaacgcccg gacaatgggg
     5341 gcgcaaccgg acgactgtac cgtgaacatc cggggcagat cgccttcgac ccagccggcc
     5401 gctttgagct cctggaaggc cttccacatg ccgatgagac cggtgccacc tccagtggga
     5461 taaatgacgg cgtggggcag ccgccatccc agttgcaggg cgatctccag accgagggtt
     5521 ttcttgcctt cgatgcggta gggctc
//
LOCUS       DASWKS010000278         4983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3449933, whole genome shotgun sequence.
ACCESSION   DASWKS010000278 DASWKS010000000
VERSION     DASWKS010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3449933"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..498)
                     /locus_tag="VGA78_07980"
     CDS             complement(10..498)
                     /locus_tag="VGA78_07980"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX9893848.1"
                     /translation="MVSPRRAPRQDPGPREVADRLHSAAIHLLRRLRSSDEVTGLTAP
                     QLSVLSVLVFGRTLTLSRLATVEQVRPPTMTRLIAELERRRLVSREADREDRRKSWVR
                     ATEAGRRLLVEGRARRVARLEADLRVLPAAEFARLARVLETLEQVARPPAPTRKRPKG
                     DR"
     gene            548..946
                     /locus_tag="VGA78_07985"
     CDS             548..946
                     /locus_tag="VGA78_07985"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893849.1"
                     /translation="MSSPALARIGQISIAAHDLERAIAFYRDVLGLTFLFQAPPGLAF
                     FEVGGVRLMLALPEGGERDHHTSVLYYEVPDIHASAQALQERQVRFESEPHLVAKLGK
                     SELWIGFFRDSEGNLVGIMQERPIGESSNR"
     gene            complement(935..2314)
                     /locus_tag="VGA78_07990"
     CDS             complement(935..2314)
                     /locus_tag="VGA78_07990"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9893850.1"
                     /translation="MTDPGELPWAGARAVARAVAAHEISALEVVQAHLDRIAALEPEL
                     GALISKNPRALDEASRSPIGPLAGVPITVKDLILTRGMRTTAGSRTFGEGLAPTRDAP
                     LIRRLRRAGAVLLGKNNLHELAMGVTTVNEHFGPSHNPWDRARVAGGSSGGSAVAVAA
                     GLGAVSIGTDTRGSIRIPAACCGVTGFKPSFGVVDTTGVVPLAPTLDHVGPIARSVED
                     AALVLGVLSGWPRRAARWLYAVDTPPERGFRVGLCEWFFRDIDGDVEGLVRQAAAVFS
                     GNGFPLEPVEIPGLGEAHRASGTITSAEALAFHAERLASNPAGIGPLIRARLEQGRGL
                     TAVDYVRAAQVRALVTAAFLEAFKRVDLLLAPTLPALPPPIGESEVRINGTPAGLLDA
                     FTRLNSVANMAGLPALSLPCGYTGEGLPVGLQLIAAPNRDDLVLALGAWYQRETDWHR
                     RWPVSDSAI"
     gene            complement(2318..2779)
                     /locus_tag="VGA78_07995"
     CDS             complement(2318..2779)
                     /locus_tag="VGA78_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9893851.1"
                     /translation="MRNVVWLLLSLVALPLAAQQPANSPELPTVSLPPELDRVLREYE
                     REWGARNAAGLAALFAEDGFVMQGSRPPARGRAAIIHAYTGAGGPLFLRALAYSTEGN
                     TGWIIGGYKGQSSGTDDGKFVLALKKGIDGRWLIAADIDNSNRPPRRPPGP"
     gene            complement(3223..4158)
                     /locus_tag="VGA78_08000"
     CDS             complement(3223..4158)
                     /locus_tag="VGA78_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893852.1"
                     /translation="MNLRTLMLPTLILAAACERSPSFTEPEVLEVSSAKGGGGKPKWI
                     AFTTDRTGVREIWRVKPDAIGLEQLTSLGENTHPSWSPDGRKIVFTSYRDGGAGEIYI
                     MNADGLNQRRITNNSSTDLQPDWSPDGSRIAFSSDATGSFDILGMKPDGSSLEIIARF
                     DDATESNPRWSPDGKLLAFLSDRNTPGTYNVWVYHAIGSWVKQITFPGVPPQPLAWSP
                     DSKRVLFHYDVGGGQQNIYGIDWETTQSIIVINSNTLSAPLLPGLAYSGTGDRLLYIG
                     LGVGNSYLTTANLDGTDRKILTQSSSMHSYPVWAR"
     gene            4281..>4983
                     /locus_tag="VGA78_08005"
     CDS             4281..>4983
                     /locus_tag="VGA78_08005"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9893853.1"
                     /translation="MLRVNVLGGLAVVRDGVRLEGAAAQPRRLALLALLAMAGPRGLG
                     RDKILALLWPDADEDRARKNLAQSVYALRQVMGEEAMVVGTWDLRLNSDRVGSDLADF
                     DTARQSGALDQAAVVYGGPFLDGFHLAGAPEFERWVDEQRSALNHVYADLLERLAVQA
                     REQNNARAGVLWWRKRAALDPHDGRVAAALMRALIAAGDTSGALQHGRSFQTALVDEL
                     ELPPDREVESVNAGLL"
BASE COUNT          811 a         1642 c         1702 g          828 t
ORIGIN      
        1 gtgaacggct taccggtcac ccttcggtct tttccgggtc ggcgcgggag gtcgggccac
       61 ctgctccagc gtctccagca cccgtgccag tcgcgcgaat tcggcggcgg gcagcacccg
      121 gagatcggcc tcgagccgcg ccacccgccg ggcccggccc tcgaccagca accggcggcc
      181 ggcctcggtg gcgcggaccc aggacttccg gcggtcctcc cggtcggctt cccgggagac
      241 cagccgccgt cgttccagct cggcgatcag ccgggtcatg gtggggggcc ggacctgttc
      301 cacggtggcg aggcgggaga gcgtgagggt gcggccaaag accagcaccg acagcaccga
      361 cagctggggc gcggtgagcc cggtcacctc gtcgctgctg cggagccgcc ggagcaggtg
      421 aatcgcggcg gagtgcagcc ggtcggcgac ctcgcggggg ccggggtctt gacggggggc
      481 gcggcggggc gataccattt cattagctaa gctaactaat tgcgtcacgt cccgccacgg
      541 aggccccatg tcctcgcccg ccctcgcccg catcgggcag atctccatcg ccgcccacga
      601 tctggagcgc gccatcgcct tctaccggga cgtgctcggc ctcacgttcc tgtttcaggc
      661 gccacccggc ctggcgttct tcgaggtggg cggggtccgg ctgatgctcg ccctgcccga
      721 agggggcgag cgggatcatc acacctcggt cctgtactac gaggtgcccg acatccacgc
      781 ctcggcccag gcgctccagg agcgtcaggt caggttcgag agcgagccgc atctggtggc
      841 caagctgggg aagagcgagc tgtggatcgg cttcttccgg gactcggaag ggaatctggt
      901 aggcatcatg caggaacggc ccatcggcga atcgtcaaat cgctgaatca gagactggcc
      961 acctccgatg ccaatccgtt tcccgctgat accacgcgcc caaggccagc accagatcat
     1021 cccgattggg cgcggcaatc agctgcaatc ccaccggcag cccctcgccg gtgtagccgc
     1081 agggtagcga gagggcgggg agcccggcca tgttggccac cgagttgagc cgggtgaagg
     1141 cgtcgagtag gccggccggg gtgccgttga tgcggacctc cgattcgccg atggggggag
     1201 gcagcgcggg aagggtcggc gccagcagca ggtcgactcg tttgaaagcc tccagaaagg
     1261 ccgcggtgac cagggcccgg acttgagcag cccgtacgta gtcgaccgcg gtgaggccgc
     1321 gaccctgctc cagccgggct cgtatcagcg ggccgatccc cgcgggattg cttgccagcc
     1381 gctcggcgtg aaacgccaac gcttccgccg acgtgatggt gccggacgcc cggtgcgcct
     1441 cgcccaatcc cgggatctcc accggctcca gcgggaaacc gttgccggag aagaccgccg
     1501 ccgcttgccg gaccagtccc tccacgtcgc catcgatgtc gcggaaaaac cactcgcaga
     1561 gccctacccg gaagccgcgt tccggtggag tatcgaccgc gtacagccag cgagcggcgc
     1621 ggcggggcca gcccgacaac acccccagca ccaacgccgc gtcttccacc gatcgggcaa
     1681 tggggccgac gtgatcgagg gtgggtgcca gcggcactac gccagtggtg tcgaccacgc
     1741 cgaaactggg tttgaatccg gtgaccccac agcaggcggc gggtatccgg atggagccgc
     1801 gggtgtcggt cccgatcgac accgccccca gtcccgcggc cacagccacc gcggacccgc
     1861 cgctggaacc gcctgccacg cgggctcggt cccagggatt gtgcgacggg ccgaagtgct
     1921 cgttgacggt cgtcacaccc atggcgagct catgcaggtt gttcttgccg agcagcaccg
     1981 cgccggcccg gcgaagtcgc cgaatgaggg gcgcatcccg ggtcggcgcc aagccttccc
     2041 cgaaggtccg tgacccggcg gtggtgcgca tgccgcgggt gaggatcagg tctttgacgg
     2101 tgatcggtac cccggcgagc ggtccgatcg ggctccggct ggcctcgtcg agcgcccgcg
     2161 ggttctttga aatcagcgcg ccgagctcgg gctccagggc ggcgatgcgg tccagatgag
     2221 cctggaccac ctccagcgcg ctgatctcat gcgcggccac cgcccgggcg acggcgcggg
     2281 caccggccca ggggagctcg ccgggatcgg tcaacggcta cggtccgggg ggccgccgcg
     2341 gcggacgatt ggagttgtcg atatcggcgg cgatcagcca gcggccatca atcccctttt
     2401 tgagggcaag cacgaacttg ccgtcatcgg tcccgctcga ctggcctttg tagccgccga
     2461 tgatccatcc ggtgttgccc tcggtgctat aggcgagcgc cctgagaaag agcggtccgc
     2521 ccgccccggt gtaggcgtgg atgatggcag cccggccccg ggccggcggg cgactcccct
     2581 gcatcacgaa cccgtcctcg gcaaacaggg ccgccagccc ggcggcgttg cgggcacccc
     2641 attcgcgctc gtattcgcgc agcacccgat cgagctcggg cgggagcgat acggtcggca
     2701 gttccgggga attcgccggc tgctgcgcag ccaggggcaa agcaaccagc gacagaagca
     2761 gccaaaccac gttgcgcatc gggacctcaa cggatcggtc ggactcgcaa cctaaccaat
     2821 ttgagggccg ctcgtcgcgc tgatccgtcg caccgctcga cgattgatga tgatgtcatg
     2881 gtcatctgcg gcatcggcgt cctctgcgga tgattctcgt ctcgagaatc ggagcgcagg
     2941 cttgattcgg gcgcttgatc atgaaagtta tccgccgatg ccgcagatta cgccgattgt
     3001 ccctcctgaa acaggcccat accgactcac gagcttgttc acaagagcaa gaatatgttg
     3061 tagtcacctc cggcatcggc gtcctctgcg gatgactatc ggcaaagagc cgcctcacgc
     3121 cgcctaacga ggccattgtc gcaagagcaa gagctggacg gcacgcgact gagcgagccg
     3181 tccagctcag agcctgaccc cgggcggagc cgctctgcag catcagcggg cccacaccgg
     3241 gtaggagtgc atgctgctcg actgagtgag gatcttccgg tcggtcccgt cgaggttcgc
     3301 cgtggtgaga tagctgttcc ccacgcccag gccgatgtac aacagccggt cgccggtgcc
     3361 gctgtatgcc aggccaggga gcaagggcgc cgacagggtg ttgctgttga tgacgatgat
     3421 cgactgggtc gtttcccaat cgatgccgta gatgttctgt tgtccccctc ccacgtcgta
     3481 gtggaacagc acccgtttgc tgtcgggcga ccaggccagc ggctgcggcg gcacgcccgg
     3541 gaaggtgatc tgcttgaccc agctgccgat cgcatggtag acccacacat tgtaggtgcc
     3601 gggcgtgttc ctgtcgctga gaaacgcgag caacttgccg tcgggtgacc accggggatt
     3661 gctctcggtg gcatcgtcga accgggcgat gatctcgagc gacgagccgt cgggcttcat
     3721 accaaggatg tcgaacgagc cggtagcgtc gctggaaaag gcgatgcggc tgccatcagg
     3781 cgaccagtcc ggctggagat ccgtcgagga attgttggtg atgcggcgct gattaaggcc
     3841 gtcggcgttc atgatgtaga tctctccggc tccgccgtcc cggtagctgg tgaacacgat
     3901 tttcctcccg tccggcgacc agctcgggtg ggtgttctca cccagcgagg tgagctgctc
     3961 cagaccgatg gcgtccggct tgacccgcca tatctcccgc acgccggtgc gatcggtcgt
     4021 gaaggcgatc catttgggct tgcctccgcc tcccttggct gagctgactt caagaacctc
     4081 aggctcggtg aacgagggcg accgctcaca ggccgcggcc agaatcaggg ttggcaacat
     4141 cagggttcgg aggttcatgg tgactgctcc caagttgtag gccgtttgtc ggtgccctcg
     4201 tcgtttgccg gggctcggaa ccaccgctac aataggcttg gggatcatcc ccggttcacc
     4261 tcccgatcac ctgattcaac atgcttcgcg tcaacgtgtt aggtgggctc gccgtggttc
     4321 gcgacggcgt gcggctcgaa ggggccgcgg cccagccgcg ccggctggcg ttgctggcgc
     4381 tcctggccat ggccgggccc cgcggcctgg ggcgagacaa gatccttgcg ctgctctggc
     4441 ctgacgcgga tgaggaccga gcccggaaga acctggccca atcggtgtac gccctccggc
     4501 aggtgatggg agaggaagcg atggtggtag ggacctggga tctgcggctc aacagcgaca
     4561 gggtcggatc cgacctcgcc gacttcgaca ccgccaggca gtccggggcc ctggatcagg
     4621 cggcggtggt gtacggcggt ccctttcttg atggcttcca cctcgccggt gctcccgagt
     4681 tcgagcgttg ggtcgatgag cagcggtccg ctctgaatca tgtttacgcc gatcttcttg
     4741 aacgactggc cgtccaggca cgggagcaga acaatgcgcg cgccggcgtc ctctggtgga
     4801 gaaagcgagc ggcgctggat ccccatgacg gccgcgtggc ggcggccctg atgcgggcgc
     4861 tgatagcggc cggcgatacc agcggagcac tgcaacacgg ccgcagcttc cagacggctc
     4921 tggtggatga actcgagctt cccccggatc gcgaggttga gagcgtcaac gccggcttgc
     4981 tat
//
LOCUS       DASWKS010000279         5074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1632385, whole genome shotgun sequence.
ACCESSION   DASWKS010000279 DASWKS010000000
VERSION     DASWKS010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1632385"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VGA78_08010"
     CDS             complement(<1..428)
                     /locus_tag="VGA78_08010"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX9893854.1"
                     /translation="MFTDLRPTPPDRIPPGQIETRKWPVLHYSRVPMVDTRIWRFRIW
                     GEVEHPLELTWDEFRMQPREETLCDIHCVTRWSRLDNRFGGVPVSALLLRARPGPEAR
                     HALVHAEPDYTTNLALTDLDRPGNLLATHFEGEPLTPEHGG"
     gene            complement(516..1211)
                     /gene="lipB"
                     /locus_tag="VGA78_08015"
     CDS             complement(516..1211)
                     /gene="lipB"
                     /locus_tag="VGA78_08015"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEX9893855.1"
                     /translation="MSEIRVVDLGRRPYQPVLDLQRALVRARLEGSLTSDLLLLVEHQ
                     PVVTLGRGTRESSLPISRPALEARGFDVVEVERGGDVTVHAPGQLVGYPIIDLQSYRP
                     DLHWYLRQLEEALIRALGALGIEAGRNPGLTGVWVGPRKIASIGVHVKRWVTLHGFAL
                     NVMTDLSAFDVVVPCGISGVVMTSVEREAGGRTDGLWSATREAVIAGFGAAFDRSMVS
                     RNLQDLPGVQSAI"
     gene            complement(1208..1636)
                     /locus_tag="VGA78_08020"
     CDS             complement(1208..1636)
                     /locus_tag="VGA78_08020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893856.1"
                     /translation="MAPAWSPDDDPFGLVFGSLGFGLTLGLALQSLVALVVRTMQLSN
                     PVSLGPPDLASPPALLLLFGTLLGSLIAAAATWSALARLQNPFRQGMLAMVTAFGSLV
                     LALVAMPIDRWIGRPGLLALALLAGLTSFLIGRRLRTGRA"
     gene            1717..2208
                     /locus_tag="VGA78_08025"
     CDS             1717..2208
                     /locus_tag="VGA78_08025"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEX9893857.1"
                     /translation="MSRRNLLAFLLTVVSLGLLLPGLSRPVLTITASITVMNTTREVF
                     RQTQSIVEAVRSLHQSGNTFVAGLILLFSILIPFTKAILLGVILAFRQRRSGYRLYLF
                     VRSISKWSMADVFAVGVFIAYLAAIGTDNLDAVAGPGFYFFAAYCLVSNLAFQLLQIP
                     NPD"
     gene            2305..2700
                     /locus_tag="VGA78_08030"
     CDS             2305..2700
                     /locus_tag="VGA78_08030"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX9893858.1"
                     /translation="MRAPALTDLQLAVMQVLWTRGEATVHAVHRSLTQRLAPTTVATL
                     LSRLEKRGLVTHRAEGRQYVYRAQVGEAEVRRTVVRRLRSLADRWFDGSVASVMVHLL
                     GDRKVTPEELARIKQLIEAKERELPPGKP"
     gene            2697..4343
                     /locus_tag="VGA78_08035"
     CDS             2697..4343
                     /locus_tag="VGA78_08035"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9893859.1"
                     /translation="MTALGGALLAGMLLFPARIPAQSKPTLPRRVVAVRAQGIAPRVD
                     GRLDDSVWVRALPAGDFVLREPTEGAAAPERTEVRFVYTHDALYVGARMYSDAPGAVR
                     ALVARRDQKLPSEQLVVSLDTRGDRITVFSFAVTPGGVRLDYHHPSDVESSRDYSYVG
                     GSYVAGDSAAILAQQFSSRRYYQRPDAGYVGVDPRRTSLSGITAGINHSKNAGNWLWD
                     IDYTHESPGLELNDLGSLGTADDRSLFTNLRYRQTRPGGALHSWVLGAFESAEWNFGG
                     TRTFTELGVFGDLTFRNFWQAEFEFNVLPRSHRDNLTRGGPLMQSPLTWRLFTEFAGP
                     SGARTRWSIEPNFGVDELDGWFATVEGFLSLRPAARWELVIEPRYARTVTPRQFVATR
                     PDGGPATFGGRYIFGRVDRSEVVVRLRLNYALKPDLTLEAYLEPFASSGRYRDLGELA
                     AARSFALRPYGGDGTSLTRQGDSVYVVTDGPSQFTFPVPDFDIRSLRSNLVLRWEWMP
                     GSTAFLVWQQDRFRREIPRESVGIGGSGRRFRSRAAISWR"
     gene            complement(4691..>5074)
                     /locus_tag="VGA78_08040"
     CDS             complement(4691..>5074)
                     /locus_tag="VGA78_08040"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9893860.1"
                     /translation="PKGYAICVTKTIAAPVGEVFDAFGQAAPLKAWLGTGATASFTEG
                     GGFSNADGNTGRYIKLARPKKLRFSWDEGDPKLVSTVEVTLTPKGDKCGLVLNHERIP
                     SRPLADGLRAAWGGAIERLKRHLEG"
BASE COUNT          822 a         1733 c         1646 g          873 t
ORIGIN      
        1 ccgccgtgtt ccggcgtcag cggttcaccc tcgaagtgcg tggcgagcag gttgccgggc
       61 cggtccaggt cggtgagcgc caggtttgtg gtgtaatcgg gctcggcgtg caccagcgcg
      121 tgccgggcct cgggtccagg ccgggcccgc aggagcagcg ctgaaaccgg aaccccaccg
      181 aagcgattgt cgagtcggct ccaccgggtt acgcagtgga tgtcacagag ggtctcttcc
      241 cgcggttgca tccggaactc gtcccaggtc agctccagcg gatgctccac ctccccccag
      301 atccggaacc gccagatcct ggtatcgacc atcgggaccc gactgtagtg caacaccggc
      361 catttgcggg tctcgatctg gcccggcgga atgcgatcgg gtggggttgg gcggaggtcc
      421 gtaaacattt ccattgaacg cttcagcgat tgagcgcttt agcggttgga tcgatttctg
      481 gtgccgtcgt ggcaatcgct gaatcgcctg aatcgctaaa tcgctgactg aacgcccggc
      541 aaatcctgga ggttccgcga aaccatgctc cggtcgaacg cggccccgaa tcccgcgatc
      601 accgcctcac gagtcgcgct ccagagtccg tccgtccgcc cgcccgcctc ccgctccacg
      661 ctcgtcatca ccacgccgct gatgccgcag ggcaccacca catcgaaggc cgagagatcg
      721 gtcataacgt tgagcgcgaa gccgtgcagc gtcacccagc gtttcacgtg aaccccgatg
      781 ctcgcgatct tccgcggccc gacccaaacg ccggtgagcc ccgggttgcg ccccgcctcg
      841 attcccagcg cgcccagggc ccggatcagc gcctcttcca gctggcgcag gtaccaatgc
      901 agatcgggtc ggtacgactg caggtcgatg atggggtatc cgaccagctg gccgggcgcg
      961 tggaccgtga catcgccccc gcgctccacc tccacgacgt cgaatccgcg ggcctccagg
     1021 gcgggccggg aaatcggcag cgagctctcg cgggtgccgc ggcccagcgt cacgactggc
     1081 tggtgctcca ccagcagcag cagatcgctg gtaaggctcc cctccagtcg ggcccggacc
     1141 agggcccgct gcaggtccag gaccggttgg tacggtcgcc ggcccaggtc caccacccga
     1201 atttcgctca tgcgcgcccc gttcttaggc gacggccgat gagaaaactg gtgaggccgg
     1261 cgagaagggc caacgccagc agtccgggac ggccgatcca ccgatcgatc ggcatggcca
     1321 ccagcgccag caccagcgag ccgaaggcgg tgaccatggc cagcatgccc tgccgaaacg
     1381 gattctgcag ccgggccagg gcgctccacg tggcggccgc ggcgatcaag ctgccgagga
     1441 gggtgccaaa gaggagcagc agggccgggg gggacgcgag atcgggcggc cccagcgata
     1501 ccgggttgct gagctgcatg gtgcgcacca ccagcgccac cagcgattgc agcgcgagcc
     1561 ccagcgtgag gccgaatccc agtgatccga acaccaggcc gaacggatcg tcatcgggtg
     1621 accaggcagg cgccatgggg gaaagctaac cggccgacac cgttcactgt ccaccgttcc
     1681 ctgttcggga atgcggggac gggtacattt gcatccatgt ctcgacgcaa cctgctggcc
     1741 ttcctgttga ccgtggtctc cctcggcctg ttgctgcccg gactgtcgcg tccggtgctc
     1801 accatcaccg cgtccatcac ggtgatgaac accactcggg aggtcttccg gcagacccag
     1861 agcatcgtgg aagccgtccg aagcctgcac cagtccggca acacgttcgt ggccggcctc
     1921 attctcctct tcagtatcct gatccccttc accaaggcga tcctgctcgg ggtgatcctg
     1981 gcgtttaggc agcgccggtc ggggtaccgg ctgtatctct tcgtccgctc catcagcaag
     2041 tggtcgatgg cggatgtgtt cgcggtggga gtgttcatcg cctatctcgc ggccatcggc
     2101 accgacaacc tcgatgccgt ggccggtccc ggcttctact tcttcgccgc ctactgtctg
     2161 gtctccaatc tcgccttcca gttgctccag attcccaacc ccgactgacc cggacccggt
     2221 ccgactccgc cgccgcttga cggtttcaac tacaggtgta atactacatc tgtagtacat
     2281 accgtctctc cccgaggatg cggcatgcgg gccccggcgc tcaccgacct tcaactggct
     2341 gtcatgcagg tcctctggac ccggggcgag gctacggtcc acgcggtgca ccgctccctg
     2401 acccagcggc tggccccgac cacggtcgcc actctgttga gccggctgga gaagcgaggc
     2461 ctggtgaccc accgggcgga aggccgccag tatgtgtacc gcgcccaggt cggcgaggcc
     2521 gaggtccgcc ggaccgtggt gcgccggctc cgctcgctgg cggatcggtg gtttgacggc
     2581 agcgtggctt cggtcatggt gcacctgctg ggggaccgca aggttacacc ggaagagctg
     2641 gcccgaatca agcagctgat cgaggccaag gagcgggagc ttccccccgg gaagccatga
     2701 ccgcgctggg aggcgcgctg ctggcgggga tgctgctgtt tcccgctcgg atcccggcgc
     2761 aatcgaaacc cactctccct cgtcgggtgg tcgcggtgcg ggcgcaaggg atcgccccgc
     2821 gggtcgacgg ccggctggac gattccgttt gggtcagggc attgcccgca ggcgatttcg
     2881 tgctgcgcga gccgaccgaa ggggctgccg cgccggagcg gaccgaagtc cgcttcgtct
     2941 acacccatga cgccctctac gtcggtgccc gcatgtacag cgacgcgccg ggcgccgttc
     3001 gcgcgctggt cgcacgccgg gaccagaagc ttccgtcgga gcagctggtg gtctcgctcg
     3061 atacccgggg tgaccggatc accgtgttca gcttcgccgt cacgccgggc ggcgtgcggt
     3121 tggactacca ccatccgtcc gatgtcgagt cgtcgcgtga ctattcctat gtcggcggca
     3181 gttacgtcgc gggcgactcg gccgcgatcc tggcccagca gttctcctcc cgccggtact
     3241 accagcgacc tgatgccgga tacgtcggcg tcgacccccg gcgcacctcg ctctccggca
     3301 tcaccgccgg catcaatcac agcaagaacg cgggcaactg gctctgggat atcgactaca
     3361 cccacgaatc gccgggcctg gagctcaatg acctcgggtc cctgggcact gcggatgacc
     3421 gcagtctctt caccaatctg cggtatcgcc agacccggcc gggcggcgcg ctgcacagct
     3481 gggtgctggg tgctttcgag tccgcggagt ggaatttcgg cggtacccgc accttcaccg
     3541 agttgggagt gttcggcgac ttgaccttca gaaacttctg gcaagccgaa ttcgaattca
     3601 acgtacttcc ccgatcccac cgcgataacc tcacccgggg cggtccgctg atgcagagcc
     3661 cactgacctg gcggctcttc acggaattcg ccggtcccag cggggcccgc acccggtgga
     3721 gcatcgagcc caactttgga gttgacgagc tcgacggctg gttcgccacc gtcgaagggt
     3781 tcctgtcgct gcggccggcg gctcgttggg agctggtgat cgagccccgc tacgcccgca
     3841 ccgtcacgcc gcggcagttc gtggccaccc ggccggatgg aggcccggcc accttcgggg
     3901 gccgctacat cttcggacgg gtcgatcgga gcgaggtggt ggtgcggctg cggctcaact
     3961 atgccctgaa accggatctg accctggagg cctacctcga gccatttgcg tccagcggcc
     4021 ggtatcgcga cctgggcgag ctggcggcgg cccggagctt tgccctgcgg ccctacggtg
     4081 gtgacggcac cagcctcacc cgtcagggcg actccgttta cgtcgtcacc gatggcccga
     4141 gccagttcac cttcccggta ccggatttcg acatccggtc cctccgaagc aacctggtac
     4201 tgcggtggga atggatgccc ggcagtaccg cctttctggt ctggcagcag gatcgcttcc
     4261 ggcgcgagat accgcgggag agcgtgggga tcggggggtc ggggaggcgt ttcagatccc
     4321 gggcagccat ttcctggcgt tgaaggtgag ctactggatc ggcatcaggt agctcggcct
     4381 gcccggccac tcatgacgcg ggccgagcgg tgtcggcgct ggcgccagac tccataggag
     4441 gattgcggac gcccgggggc tggggcggcc cttcggcgac ggcgcctgtg caatgtggcg
     4501 gcggggtaca catctggcgg ctgccggaag ccaaggtcgg gaagctcgag tagcggatac
     4561 cagaatcccc cgattcgaaa aagctgtccg cagattacgc agatggcgca gatactgcac
     4621 caataaaatg cccacaaacg cctaacgtat cactgttccg aaagcgtccg gcaggacctc
     4681 ggcacgcgcg tcatccctcg aggtgtcgct tcaaccgctc gatcgccccg ccccaggcag
     4741 cccgtaatcc atcggccagc ggacgcgacg gaatccgttc gtggttgagg accagtccgc
     4801 acttgtcgcc cttgggagtg agcgtcacct cgactgtgct caccagcttc ggatcgccct
     4861 cgtcccagga aaaccggagc ttcttggggc gggccagttt gatatacctg ccggtattgc
     4921 catccgcgtt ggagaagccg cccccctccg tgaaggacgc cgtggcccca gtgccgagcc
     4981 aggccttgag cggagcggcc tggccgaacg cgtcgaagac ctcccccacc ggcgcggcga
     5041 tcgtcttggt aacgcagatg gcatacccct tggg
//
LOCUS       DASWKS010000280         2021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_133429, whole genome shotgun sequence.
ACCESSION   DASWKS010000280 DASWKS010000000
VERSION     DASWKS010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133429"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1455)
                     /gene="guaA"
                     /locus_tag="VGA78_08045"
     CDS             complement(<1..1455)
                     /gene="guaA"
                     /locus_tag="VGA78_08045"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEX9893861.1"
                     /translation="MTTAAHVANRQSSIVNEKDLVSHHPGILILDYGSQFTQLIARRV
                     REAHVYCEIHPPTRSLDWIRAWQPKGIILSGGPNSVYEPGAPVGPEGLLELDLPILGL
                     CYGMQLLARMAGGSVVGADRREYGRATVRVEGGRLFRGFDPGEETPVWMSHGDHVDQP
                     PPGFVSTASSANSPVAGFEHQHRPIFAVQFHPEVAHTARGGELIANFLFDICGCVPDW
                     TAGHFIESEVARIAAQVGPSARVICGLSGGVDSSVAAALVHRAVGDRLTCIFVDHGLL
                     RQHERDQVDHTFRSHLGIDLRVVDASGRFLERLAGVLDPEEKRRRIGHTFIDTFEQAA
                     QAVGPEVGFLVQGTLYPDVIESVSPRGGPSVTIKTHHNVGGLPERLPFTLIEPLRELF
                     KDEVRQVGRELGLPEEMVGRHPFPGPGLAIRILGEVTPPSLDLLRRADAIFLEEIRAA
                     GLYDDIWQAFAVLLPIRSVGVQGDFRTYDLTVALR"
     gene            complement(1491..>2021)
                     /locus_tag="VGA78_08050"
     CDS             complement(1491..>2021)
                     /locus_tag="VGA78_08050"
                     /inference="COORDINATES: protein motif:HMM:NF012500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893862.1"
                     /translation="HHERPLEPLRLAEAVLPILAPLRLALHLEPGRYLVGSAGLLVTT
                     VLYRKHAGGKEFVVVDAGMSDLVRPSHYLAYHDIVAARDSGRPSRLMDVVGPICESGD
                     FLALERELPDVQQGDVLAILGAGAYGFVMGSIYNGRPRPAELLVDGGKWGVARARETV
                     ASLMSGEVAQPLMIPD"
BASE COUNT          348 a          702 c          651 g          320 t
ORIGIN      
        1 ccggagggcc acagtgagat cgtaggtccg aaaatcgccc tgcaccccga ccgaccggat
       61 cgggagcaac actgcgaacg cctgccagat gtcgtcatac aaccccgcgg cgcgaatctc
      121 ctccagaaaa attgcgtcgg cccggcgcag caggtcgagg gacggaggcg tcacttctcc
      181 cagaattcgt atcgcgagtc ccggacccgg aaaggggtga cgtccgacca tttcctccgg
      241 gagtcccaat tcccggccca cttgtcggac ttcgtccttg aacaattccc gcagcggctc
      301 gatcagcgtg aaggggagcc gctcgggcag acccccgaca ttgtgatggg tcttgatggt
      361 gacggaggga ccgcctcggg gactgacgct ctcgatgacg tcggggtaca gcgtcccctg
      421 gaccaggaat cccacctccg gtccgaccgc ctgagccgcc tgttcgaacg tgtcgatgaa
      481 ggtgtggccg atgcggcgcc gcttctcttc cgggtcgagc acaccggcca ggcgctcgag
      541 gaagcgcccg ctggcgtcca ccacccgcag gtcgatgccc agatggctcc ggaacgtgtg
      601 gtccacctgg tcgcgctcgt gctgccggag gagcccgtga tcgacgaaga tacaggtcag
      661 ccggtcgccc accgcccggt ggaccagtgc cgccgcgacg ctggaatcga ctccgccgga
      721 gagcccgcag atcacccgcg ccgaaggacc gacctgcgcc gcaatgcggg cgacctcgga
      781 ctcgatgaaa tggcccgcgg tccagtcggg cacgcagccg cagatgtcga acaggaaatt
      841 ggcgatcagt tcaccgcccc gcgcggtgtg ggccacctca gggtggaact ggaccgcgaa
      901 gatgggccgg tgctgatgct cgaacccggc cactggggag ttggcgctcg aggcggtgct
      961 gacgaagccg gggggcggct gatccacatg gtcgccgtga ctcatccaga ccggcgtctc
     1021 ctcaccggga tcgaacccgc ggaacagccg gccgccctcc actcgcaccg tggcgcgtcc
     1081 gtattcccgc cggtcggccc cgaccacgga gccgcccgcc atccgggcca gcagttgcat
     1141 gccgtagcac agaccgagga tcggcagatc cagctccagc aatccctccg gtcccaccgg
     1201 cgcgcccggc tcgtagaccg agttcggtcc gcccgacagg atgatgccct tcggttgcca
     1261 agcccgaatc cagtcgagcg accgggtggg gggatggatc tcgcagtaga cgtgcgcctc
     1321 gcgcacccgt cgcgcgatga gttgggtgaa ctgggagccg taatccagga tcagtatgcc
     1381 gggatggtgt gacacgaggt ccttctcatt gacgattgac gattggcgat tggccacgtg
     1441 agcggctgtt gtcacgggtc atcctcgggt tgcggtgtaa tcgtcaatcg tcaatcgggt
     1501 atcatcaatg gttgtgcgac ttcaccgctc atcaacgacg cgacggtctc ccgcgcccgt
     1561 gccactcccc atttcccccc atccaccagc agctccgccg gtcgcggccg gccgttgtag
     1621 atggaaccca tcacgaaccc gtaggccccg gcgcccagta tcgccagcac gtcgccctgc
     1681 tgcacgtcgg gaagctcccg ttccagcgcc aggaaatcac cgctttcgca gatcggcccc
     1741 accacgtcca tcaggcggct cggccggccc gagtctcgcg ccgcgacgat gtcgtggtac
     1801 gccaggtaat ggctgggccg gaccaggtcg ctcatgccgg catcgacgac cacgaattcc
     1861 ttcccgccgg cgtgcttgcg atagaggacc gtggtgacca gcaggccggc gcttcccacc
     1921 aggtatcgcc cgggttccag gtgaagcgcg agccgcagcg gggccaggat cggcagcacc
     1981 gcctccgcca gccggagcgg ctccagcggt cgctcgtgat g
//
LOCUS       DASWKS010000281         3831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2733026, whole genome shotgun sequence.
ACCESSION   DASWKS010000281 DASWKS010000000
VERSION     DASWKS010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2733026"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /gene="purH"
                     /locus_tag="VGA78_08055"
     CDS             complement(<1..1185)
                     /gene="purH"
                     /locus_tag="VGA78_08055"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: protein motif:HMM:NF002049.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEX9893863.1"
                     /translation="MPRALISVSDKRGMVAFAQGLVELGWEIVSTGGTAAALRKAGVP
                     VTSVDQVTGFPEILDGRVKTLHPRIHAGLLARPDIPTHASALSEHGILPFQLVAVNLY
                     PFQATIANPGVSFEDAIENIDVGGPSMLRSAAKNHHYVIPVVDPKDYPVVLGMLQSGA
                     VSDEHRREFAAKVFTHVADYDAAIAGYLTRPDDRMPARINLSLERVMPLRYGENPHQQ
                     AALYAAEEPRGIRDLRQLQGKELSFNNLLDIDSAISAVTAWGNRPACAVIKHTTPCGI
                     AVGRSAIDALHKARSTDPTSAFGSVIAINTVIDRIIAEALQDLFVEVVVGPTVHDEAL
                     ALFAARKNLRVVELPISSGVGSFDWKRVRGGFLVQERFVFDPSEDGWKIATQREPTPT
                     EWD"
     gene            complement(1196..1798)
                     /gene="purN"
                     /locus_tag="VGA78_08060"
     CDS             complement(1196..1798)
                     /gene="purN"
                     /locus_tag="VGA78_08060"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEX9893864.1"
                     /translation="MYRIAVAVSGRGSNLTALLGTLGAGTAAQVVLVLSHNSAAGGVV
                     LARAAAIPTAIFADPADPAAWLAALGALRVDLLVLAGYLKLVPSPVVQAYRGRILNIH
                     PALLPRHGGPGMYGLRVHRAVLAAGDTESGATVHLVDEEYDRGAIIAQVRVPVLPDDT
                     PERLAQRVLGAEHQLLPAAVLKAAQAGVPVPFSFELETAQ"
     gene            1979..2968
                     /locus_tag="VGA78_08065"
     CDS             1979..2968
                     /locus_tag="VGA78_08065"
                     /inference="COORDINATES: protein motif:HMM:NF020448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1835 domain-containing protein"
                     /protein_id="HEX9893865.1"
                     /translation="MLHLRCGDDILEMLEAAGIPGEKAKWCDPLCEGPIRAWPDDGAR
                     RAERSAWIAARFGGDPKEVLHQFEAEDLTLASAARQDEVVLWFEADLFDQSILVFLLD
                     RLAEIAPGHTSLICIGSYPGVSDFVGLGNLSPEQLATLFPARVPVTAAQFGLARTAWE
                     VLQSGDPEAMWALASSGTPELEFLADAIRRHLADLPSTRTGLSLTESLSLMVFAAGAD
                     TPGHAFPAVQRFETRPWMGDVGFFATLRLLASGPTPLLRAQGKLPRVDDHHAFLQTKF
                     EVTDHGRAVLEGREDWFRLAGVSRWHGSILLEAPEPGWRWDERAERPVKAIDD"
     gene            complement(3025..3573)
                     /locus_tag="VGA78_08070"
     CDS             complement(3025..3573)
                     /locus_tag="VGA78_08070"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX9893866.1"
                     /translation="MTLRPAAFLDRDGSIIEDTGFVRDPDTVRLVPGAAEAIGRLNHA
                     GWVVVVITNQSGLARGLMTPAEYDAVKRRTEQLLANESARIDATYLCPHWPPITGPCQ
                     CRKPGLAHYRAAIEAFHIDPAKSLFLGDKLSDILPARALGGRGVLVRTGQGARSEADA
                     RAAGFAVAANLLEAVNALTIDD"
     gene            complement(3570..>3831)
                     /locus_tag="VGA78_08075"
     CDS             complement(3570..>3831)
                     /locus_tag="VGA78_08075"
                     /inference="COORDINATES: protein motif:HMM:NF015780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893867.1"
                     /translation="REAGPHVIAGQSAVGGGSFPGALLSTFLVALDPAALGVEDLTRR
                     LRVGSPPVVGRVGDGKLLLDPRTLTDEDLPQLAGAIRTALEA"
BASE COUNT          624 a         1241 c         1360 g          606 t
ORIGIN      
        1 gtcccattcg gtgggcgtcg gttcccgctg ggttgcgatc ttccagccgt cctcgctggg
       61 atcgaatacg aagcgttcct gcaccaggaa tccgccccgg acccgcttcc agtcgaacga
      121 gccgaccccg ctgctgatcg gcagctccac cacccgcagg ttcttccggg cggcgaacag
      181 cgccagggct tcgtcgtgga cggtcggccc gaccactacc tcgacgaaga gatcctgcag
      241 ggcctcggcg atgatccggt cgatcaccgt gttgatcgcg atcaccgagc cgaaggccga
      301 cgtggggtcg gtggagcggg ccttatgcaa cgcgtcgatc gcgctgcgcc ccacggcgat
      361 gccgcagggc gtggtgtgct tgatgacggc gcaggccgga cggttacccc aggcggtcac
      421 ggcggagatc gccgagtcga tgtcgagcag attgttgaag gagagctcct tgccctggag
      481 ctggcgcagg tcccggatgc cgcggggttc ttcggcggcg tacagggcgg cctgctggtg
      541 ggggttttcc ccatagcgca gcggcatcac ccgttccagc gacaggttga tccgcgccgg
      601 catgcggtcg tcgggacggg tcaggtaccc cgcgatagcg gcatcgtagt ccgccacgtg
      661 ggtgaagacc ttggcggcga attcgcggcg gtgttcgtcg gagacggcgc cgctctgcag
      721 cattcccagg acgacgggat agtccttggg gtcgaccacc gggatcacat agtgatggtt
      781 cttggccgcg gaccggagca tcgacggtcc ccccacatcg atgttctcga tcgcatcctc
      841 gaagctcacg cccggattgg cgatggtggc ctggaaggga tagagattga ccgcgaccag
      901 ctggaagggc aggatgccgt gctcgctcag ggcgctggcg tgggtgggaa tgtcgggccg
      961 ggccaacagg ccggcgtgga tccggggatg cagggtcttg acccggccgt ccaggatctc
     1021 ggggaacccc gtcacctggt ccacgctggt gaccgggacc ccggccttcc ggagagcggc
     1081 ggcggtgcca ccggtggaga cgatctccca acccagctct accagcccct gggcaaaggc
     1141 gaccatcccg cgtttgtcgc tcaccgaaat caacgcgcgg ggcatcgaag ctccctcact
     1201 gagcggtctc caattcaaag ctgaatggta ctgggacacc ggcctgggcg gcctttaaga
     1261 ccgcagccgg caacagctgg tgctccgcgc ccagcacccg ctgggccagc cgttccggcg
     1321 tatcatcggg caggaccggc acccgcacct gggcgatgat ggcgccgcgg tcgtattcct
     1381 cgtcgaccag atggacggtg gcgccgctct cggtgtcacc ggccgcgagc acggcgcgat
     1441 gcacccgaag gccgtacatc cccggtcccc cgtgccgcgg cagcagcgcc gggtgaatat
     1501 tgaggatccg cccgcggtac gcctgcacga cgggactcgg caccagcttg aggtaccccg
     1561 caagcaccag caggtcgacg cggagtgccc cgagcgccgc cagccaggcg gccgggtcgg
     1621 ccgggtcggc gaagatggcg gtggggatgg cggcggcgcg ggccaagacc acaccgcctg
     1681 cagcggaatt gtggctcagg acgaggacca cctgagcggc tgtgccggcg ccgagggttc
     1741 ccagcagagc ggtcaggttg ctgccgcgac ccgagaccgc gacggcgatg cgatacaccc
     1801 gacaaactta agggagaggt gggatgggct gaagggtgag tgaatgcaga atgcagaatg
     1861 cccagtgccc aaggcgaagg gtagggagag ggacacccct gccatgggca ttcggcattg
     1921 ggcactctgc gttcattccc cccttacccc tcaaccctac cacattcgcg gagtgactgt
     1981 gctgcacctg agatgcgggg acgacattct ggaaatgctg gaggcggcgg gcattccggg
     2041 cgagaaggcc aagtggtgcg atccgctctg cgagggaccg atccgggcct ggcctgatga
     2101 cggggcccgc cgggcggagc ggagtgcctg gatcgcggcc cgtttcggcg gcgacccgaa
     2161 agaggtgctt catcagttcg aggccgagga tctgacgctg gcctcggcgg cgcggcagga
     2221 cgaggtcgtg ctctggttcg aagccgacct gttcgatcag agcatcctgg tgttcctgct
     2281 cgaccggctg gccgaaatcg ccccgggaca cacgtccctg atctgcatcg ggagctatcc
     2341 gggggtttcc gatttcgtgg ggttgggcaa cctgagtccg gagcagctgg ccaccctgtt
     2401 ccccgcccgg gtaccggtca cggccgccca gtttgggctg gcccggacgg cgtgggaggt
     2461 gctgcagagc ggggacccgg aggccatgtg ggctctggcg agcagcggga cgcccgagct
     2521 ggaattcctg gccgacgcca tccggcgcca tctggccgat ctcccctcga ctcgaaccgg
     2581 gctgagtctc accgaatcgc tgagcctgat ggtgttcgcg gcgggagccg atacgccggg
     2641 tcatgccttt cccgcggtgc aacgcttcga gacccggccc tggatgggcg atgtcgggtt
     2701 cttcgccacg ctccggctgt tggcgtcggg acccacgccg ctgctccggg ctcagggcaa
     2761 acttccccga gtggacgatc accacgcatt cctccagacc aagttcgagg tgaccgatca
     2821 cggacgggcc gtgctggagg ggcgggaaga ctggttccgg ttggccggcg tgtcccgctg
     2881 gcacggcagc atcctgctgg aggccccgga gccgggctgg aggtgggatg agcgggcgga
     2941 gcggccagtc aaagccattg acgattgaac gattgacgat cgacgattgc gtcccgctgt
     3001 cccaacggtt gggcggagca atcatcaatc gtcaatcgtc aatgcattca ccgcctccaa
     3061 gagattggcg gcgaccgcaa atcccgcagc cctcgcgtcg gcttccgatc gggcgccttg
     3121 accggtccgg accaggaccc cccgcccgcc taacgcccgg gccggcagga tgtcgctcag
     3181 cttgtcgccc aggaagagac tcttcgccgg atcgatgtgg aaggcctcga tggcagcccg
     3241 gtagtgggcc aggccgggct tgcggcactg gcagggaccg gtgatcggtg gccagtgggg
     3301 acacaggtag gtggcgtcga tccgggccga ctcattcgcc agcaactgct cggtgcgacg
     3361 tttgacggcg tcatactccg ccggcgtcat caatccgcgg gcgaggcccg actgattggt
     3421 gatcaccacg accacccagc cggcgtggtt gaggcgtcca atcgcctccg cggcgccggg
     3481 aaccaggcgc accgtgtcgg ggtcacggac gaagccggtg tcttcgatga tggagccgtc
     3541 gcggtcgaga aacgctgccg gacgaagcgt catgcctcga gcgcggtccg gatggcgcca
     3601 gccagttggg ggaggtcctc gtcggtcaag gtgcgcggat cgagcaacag cttgccgtca
     3661 cccacccgac ccaccaccgg cggcgagcct acccggagcc gacgggtgag gtcctcgacc
     3721 ccgagggcgg ccgggtcaag cgccaccagg aaggtcgaca gcagcgcgcc ggggaaggag
     3781 ccgcctccga ccgctgactg tccggcgatg acgtgagggc cggcttcccg c
//
LOCUS       DASWKS010000282         2687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_878267, whole genome shotgun sequence.
ACCESSION   DASWKS010000282 DASWKS010000000
VERSION     DASWKS010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878267"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VGA78_08080"
     CDS             complement(<1..721)
                     /locus_tag="VGA78_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893868.1"
                     /translation="MPRRRSYAALLVLALLLVLAPPTLGAPGNQLSEGSVNPVNGTTA
                     NSFVFTVRYTSAQGHPATSVSATVSTFTVPMGLIAGTASDGTFQGNTNLPAGSFNVTF
                     LADAQQGFDPSLAGPTVTVSFAPPPTPAPTPPPTPVPTPPPAPVATPVATPAASAPSS
                     PADGTTPSPGSSGFIGGVVETPPPSGQLDPGPAIGGGDVESQLWTLLIGGLIAIGVLT
                     LFGIFLILRDRRRNTVEERITL"
     gene            complement(785..1549)
                     /locus_tag="VGA78_08085"
     CDS             complement(785..1549)
                     /locus_tag="VGA78_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893869.1"
                     /translation="MTRRWLRAPLLAVTLLLLLVAPALAAPNKLSNGAVSPASGNPAT
                     IFTFTVQYEGAAATVTASVAGLTVPMSPVPGSANDTFRGTASLPVGSWQVTFLADATT
                     GKDDDLPGPTVVVTSGATPRPTITPTPAPTPPPTPAPTPIPTRPPISITATPLQPTPL
                     PSITPSPVESGSPGASGFIGGFIRTPPPTSTPDAAPAVEGPGVADEMWTLVTGGLIAL
                     SALALLGMVGILRTRRPKPVDEPIGPADYRPPTGDE"
     gene            complement(1596..2561)
                     /locus_tag="VGA78_08090"
     CDS             complement(1596..2561)
                     /locus_tag="VGA78_08090"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9893870.1"
                     /translation="MKRILSIDGGGVRGVIPAVWLAALEKQVGGLARDQFDFVAGTST
                     GALIAAAVAVGIPAQTIVELYVDRAPKLFSKIPVISTIRRILFGHMYDVEELHRLIRQ
                     ELGSPAADWQLNDVPRDILITAKGLTDSHQWYFVKGNPRNSGRTGTLKLADCLTASAA
                     APTFFAPRAVPGIEGLLVDGGTGVAGNPVYQACVEAFHFTDGYSETDTVVVSLGTGYF
                     LKRKPPTWLYRWLSWLLAELLRSPGEQQTELVDRHFGDVRFYRVDLELPSDFSMDDAT
                     KMADLKLLGEKLLPKIEWPKILDGTDTHWLVRKGHRQPSEYAEAV"
BASE COUNT          416 a          860 c          990 g          421 t
ORIGIN      
        1 tcaacgtgat ccgctcctcg acagtgttgc gccgccggtc acgcaggatg aggaagatcc
       61 cgaacagggt cagcaccccg atcgcgatca gcccaccgat cagcagcgtc cacagctggc
      121 tttcgacgtc gccgcctccg atcgccggcc ccggatccag ctggccgctg ggcggcggcg
      181 tctcgaccac tcccccgatg aagccgctgc tgccgggtga cggggtcgtg ccgtcggccg
      241 gactcgacgg tgcggaggcg gccggggtgg ccaccggggt ggccacgggt gcgggtgggg
      301 gcgtgggaac gggcgtcggt ggcggcgtgg gagccggggt gggcggcgga gcgaaggaca
      361 ccgttacggt ggggcctgcc agcgacgggt cgaagccctg ctgcgcatcg gccaagaaag
      421 tgacattaaa cgagcctgcc ggcaggtttg tattgccctg gaaggtgccg tcagaggcgg
      481 tgccggcgat gaggcccatc ggtaccgtga aggtggacac cgtggccgac acgctggtgg
      541 ccgggtgtcc ctgggcgctg gtgtagcgga ccgtaaagac gaagctgttg gcggtggtgc
      601 cgttcaccgg gttgacggag ccctcgctca gctggtttcc cggcgcgccc aacgtcggcg
      661 gcgccagcac caagaggagc gccagcacca ggagcgcggc gtaggaccga cgacgcggca
      721 tgccaggcag gatcgagcat ccggacggtc ccgtcgagag ggtatgagag cgggtacttt
      781 cgggctactc gtcgccggtc ggcggtcggt aatccgccgg accgataggc tcgtcaaccg
      841 gtttgggccg gcgtgtacgc aggatgccga ccatcccgag cagggccagg gcggacagcg
      901 cgatcagccc gcctgtcacc agggtccaca tctcgtcggc gacacccggt ccttcgacgg
      961 cgggcgccgc atccggggtc gaggttggag gcggggtccg gatgaatcct ccgatgaagc
     1021 cgctggcacc cgggctcccg ctctcaaccg ggctcggcgt gatgctcggc agcggggtcg
     1081 gctgcagggg cgtggcggtg atggatatcg gcggcctggt ggggattggc gttggtgcgg
     1141 gcgtcggtgg cggagtggga gccggggtgg gcgtgatcgt cggacgcggc gtggcgcccg
     1201 acgtgacgac gaccgttgga cccgggaggt cgtcgtcttt gcccgttgtt gcatcggcaa
     1261 ggaacgtgac ctgccaagac ccgaccggca ggctggccgt tccacggaat gtgtcgttcg
     1321 ccgagcccgg aacggggctc atcggaaccg tcaagcccgc caccgaggcc gtgacggttg
     1381 ccgcggcgcc ctcgtactgg accgtgaagg taaagattgt cgcggggttc ccgctcgcgg
     1441 ggctgactgc gccgttggac agcttgttgg gggcggcaag cgcgggcgcc accaacagca
     1501 ggaggagcgt gactgccaag agcggggcac gaagccatcg gcgcgtcatg gaatgtcaag
     1561 gatcgaggat tccgccgccc gcgtccagag gcgggctata ccgcttcagc gtactccgat
     1621 ggctgccggt ggcccttgcg aaccagccaa tgcgtgtcag tgccgtccag gatcttcggc
     1681 cactcgatct tgggaagcag cttctcgccg agcagcttga ggtcggccat cttcgtcgca
     1741 tcgtccatcg agaagtcgct tggcagctcc aggtcgacgc ggtagaacct cacgtccccg
     1801 aagtgccggt cgacgagctc ggtctgctgc tcgcccggcg atcgcagcag ctcggcgagc
     1861 agccagctca gccatcggta gagccaggtt gggggcttgc gcttcaggaa gtagccggtg
     1921 cccagcgaca ccacgacggt atcggtctcc gagtagccgt cggtgaagtg gaaggcctcg
     1981 acacaggcct ggtagaccgg gttgccggcc acaccggtgc caccgtcgac gagcagaccc
     2041 tcgatccccg gcaccgcgcg cggcgcgaag aaggttggcg ccgccgccga tgcggtcagg
     2101 cagtcggcaa gcttcagggt gccggtcctg ccggagttgc gcggattgcc cttgacgaaa
     2161 taccactggt ggctgtcggt cagccccttg gcggtgatga ggatgtcgcg cggcacgtcg
     2221 ttcagctgcc agtcggcggc cgggctgccc agctcctggc ggatgagccg atggagctcc
     2281 tcgacgtcgt acatgtgccc gaacaggatg cgccggatgg tcgagatgac cgggatcttg
     2341 ctgaacagct tcggcgcgcg gtcgacgtag agctccacga tcgtctgggc cggaatcccc
     2401 accgccaccg ccgccgcaat cagcgcccca gtggaggtgc cggccacgaa gtcgaactgg
     2461 tctcgggcga ggccgcccac ctgcttctcc agcgcggcga gccagaccgc cgggatgacg
     2521 cctctgacgc ctcccccgtc gatcgagagg atccgcttca tcacgccctc agactagtcg
     2581 cagcgtcgtc cccccggggt gcggtgccac caccagtggc gttgtgacga tcgaacgcac
     2641 ggcagcggct cgaccgcggc gtctcgatgg tcggggtgcc accctgt
//
LOCUS       DASWKS010000283         4059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_879089, whole genome shotgun sequence.
ACCESSION   DASWKS010000283 DASWKS010000000
VERSION     DASWKS010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879089"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..1783
                     /locus_tag="VGA78_08095"
     CDS             251..1783
                     /locus_tag="VGA78_08095"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9893871.1"
                     /translation="MATQCVINVDLADVFAKPERKELLHTLAWGDQVEVVETTSKHVK
                     IRTARFEEKPDGSIVAVPTDAFICPTTSSGVAPADSVIPRKNNRVLKVNMVDVQQGDG
                     AVIESADGKVILVDGGDNQLFARYLAARFRGTSEAKPREIDCILVTHGDADHFAGLTK
                     IHQSETNADPRKRLFIAPRRVYHNGLVKRPSKDANQETIPEKESLGPTKVVDGKTILT
                     GLVNNPLTVPDQEMNLPFREWKKALKDWDSRAGIEFRRLAFGDDDAFDFFTGDDLEIS
                     VLGPFLTKKGGVTGLTFLGNPPKGPRVGHDSLQLGEEGFTGLSASHTINGHSIVFRLR
                     YGAFSYLFAGDLNDESSRILARSHQQGAINLRSEVFKVPHHGSADFSGAFFQMVSPII
                     SIVSSGDESARKEYIHPRATLMGALGRHSRVDEPLVFVTELVAFFNLEGFARLSDKKK
                     DAKRGEFFGFSRTAFGIVKTRTDGSRLLVYTDSGKANLKEAYAYSLDSNGQPIPSPVV
                     RG"
     gene            1803..3785
                     /locus_tag="VGA78_08100"
     CDS             1803..3785
                     /locus_tag="VGA78_08100"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEX9893872.1"
                     /translation="MSLTGLLLLVLAQQPPGPAATVQLPRRPDLRGRTYAAAEEILRR
                     FRITVVTRDSLVREGRLGVVLAQYPSPGTPIRPGSVDTLVLSWHGPTDDVQVRVPDVV
                     GRPYREAVRLIRGARLVAQGPVVNSADSATALVVAQKPNPLDPALPGSAVQLDVRLEV
                     RVQVPSLVGRDSATARESIQRARLRARPPDLDYDDNATAGVVTHQDPPAGESVKPGTS
                     VRIRVSRGPHPDTTLVVMPRLLNLGVERARAAVERARLVLSHIDSVPQSGGAARVIAQ
                     EPHAGDTVHIGDAVRITLTAPQRTVMVPPLIGRSRSQAEDTLRRLGLEPAPIGIVADP
                     VAPDGIVMRQSALPGTFLLAGQSVGLEVNARPVEVPVIVPRLVGLGLEAATETIVARH
                     LTVRGITRRAGADNIVLSQAPGPGTSVARGAGMELSVGRDDPGDDAPPPPPPLPVILV
                     PDVRDSPVATAVAVVRAAGFVNLVVDSAAAPGPVLQWTIAAQAPAPGARVRPQTLVRL
                     TATGAAGVPTPHLVDRNPDDAALEARSANLRMQVVDSHVGLRLVGSVVRTQVPAADVL
                     VAPGTPISVTIANPIPFVVSAGAGIAGLALATGVGVRKGWIKPAVRVRLEAEPPALAT
                     PEHELIETELRVTVEFEPLELSVPDGIILREEPYHE"
     gene            3778..>4059
                     /locus_tag="VGA78_08105"
     CDS             3778..>4059
                     /locus_tag="VGA78_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893873.1"
                     /translation="MSDYDITLGAALGFEPPSDKDTSLTRGVTKAVELVAEALDQMPL
                     LRNLKLTSDVVEQIGSFLTTPVSGLALGAWNKRGEIRKYADPEQFPPGSK"
BASE COUNT          694 a         1349 c         1339 g          677 t
ORIGIN      
        1 ccgttatgct gaaagccaga gagtagaacg gccttcgagc cccctgaacc gcccgttcga
       61 tgtaacggtt tggtaacgaa cggccagggt cggagttcgt aagtctaagc ctccgagcac
      121 attgcggagc ccctatcagg cttgataggg gttaccctat cacaagtgct agttaccaga
      181 cgtccggccc gcgcctagct ctccagttct ccgacaaatc cacggcggtt ctctccagtg
      241 aggcagtacc atggcaacgc agtgcgtcat caacgtcgat ctcgcggatg tgttcgccaa
      301 gccggaacgg aaggaactgc ttcacaccct ggcctggggc gatcaggtcg aggtggtgga
      361 aaccacgtcc aagcatgtca agatccgaac cgcccggttc gaggagaagc ccgacggcag
      421 cattgtcgcg gttcccaccg atgccttcat ctgccccacc acgtcctcgg gcgtcgcacc
      481 tgccgactca gtcattcccc gtaagaacaa tcgggtgctc aaggtcaaca tggtcgacgt
      541 gcagcagggg gacggggccg tcatcgagtc agcggacggg aaggtcatcc tggttgacgg
      601 cggcgacaac cagctctttg ctcgatacct ggccgcccgg ttccggggga ccagcgaggc
      661 caagcccagg gagatcgatt gcattctcgt tacccacggc gatgccgatc acttcgcggg
      721 cctgaccaag atccaccaat cggagaccaa tgcggacccg aggaagcggc tcttcattgc
      781 gccgcgccgg gtctaccaca acggtctggt caagcggccg agcaaggacg cgaaccagga
      841 gacgattccc gaaaaggaga gtctcggtcc caccaaggtg gtcgacggca agaccatcct
      901 gaccggtctg gtcaacaatc ctctgaccgt gccggaccag gagatgaatc tcccgttccg
      961 tgagtggaag aaggcgctca aggactggga ctcccgggcc gggatcgagt tccgccgcct
     1021 cgccttcggc gacgacgacg cgttcgactt cttcaccggt gacgacctcg agatctccgt
     1081 gctcggtccg ttcctcacca agaagggcgg cgtcaccggt ctcacgttcc tggggaatcc
     1141 tcccaaaggc ccccgagtgg gtcacgactc gcttcagctg ggcgaggagg gattcaccgg
     1201 gctctcggcc tcgcacacca tcaacggtca ttcgatcgtg ttccggctgc gttacggcgc
     1261 gttcagttac ctgttcgccg gcgacctgaa cgacgagtcc agccggattc tcgcccgctc
     1321 ccaccagcaa ggcgcgatca acctccgctc cgaggtcttc aaggtgccgc accacggctc
     1381 ggcggatttt tcgggcgcgt tcttccagat ggtgtcgccc atcatcagca tcgtgtcgag
     1441 tggggacgag tcggcacgaa aggagtacat ccacccccgc gccaccctga tgggagcact
     1501 ggggcggcat tcccgggtgg acgagcccct ggtgttcgtg accgagctgg tggccttctt
     1561 caacctcgaa gggttcgcgc gtctctccga caagaagaag gatgccaagc gaggcgaatt
     1621 ctttggcttc agccggaccg cgttcggcat cgtcaagacc cgcaccgacg gtagccgcct
     1681 gctggtgtac accgacagcg gcaaagcgaa tttgaaggaa gcgtacgcct actccctcga
     1741 cagcaacggg cagccgatcc cgtccccagt cgtgaggggg tgacgcgccg gaggtaccag
     1801 ccatgtcact gaccggcctg ctcctcttgg tcctggcgca acagcccccc ggacccgctg
     1861 ccaccgtaca attgccgcgg cggccggacc tgcgcggccg aacctacgcg gcggcggaag
     1921 agattctccg gcgtttccgg atcaccgtgg tcacccgtga ctccctggta cgcgaggggc
     1981 gcctcggggt cgtcctggcg cagtatccat cacccgggac cccgattcga cccgggagcg
     2041 tggatacgct ggttctgtca tggcacgggc cgaccgacga tgtccaggtg cgggtgcctg
     2101 acgtagtcgg ccgtccctat cgggaggcgg tgcgcttgat tcggggcgcc cggctggtgg
     2161 ctcagggacc ggtggtcaat tcagcggata gcgccacggc cctggtcgtg gcgcagaagc
     2221 cgaacccgct ggatccggcg ctacccgggt cagccgtcca gctcgacgtt cgcctggagg
     2281 tgcgggttca ggtacccagc ctggtcggcc gggacagtgc cacggcgcgg gagtcaatcc
     2341 agcgggcccg cctccgcgcc cgccctccgg acctggacta cgacgacaat gccactgcgg
     2401 gagtggtgac ccaccaggac ccaccggcgg gtgagtcggt caagcccggg acctcggtcc
     2461 ggatccgggt gtcgagaggg cctcacccgg acaccacgct ggtcgtcatg ccccggctgc
     2521 tcaatctggg tgtcgagcgg gcccgcgccg cggtggaacg ggcccgtctg gtcctgagcc
     2581 acatcgacag tgtgccccag tccggcggag cggcgcgggt catcgcgcag gagccgcacg
     2641 ccggcgacac ggttcacatc ggagatgcgg tgcggatcac gctgacggcg ccgcagcgca
     2701 ccgtcatggt gccgccgctc atcggccgct cccgctccca ggccgaagac accctgcggc
     2761 gtctcggact cgagccggcc ccgattggca tcgtggccga tccggtcgcc ccggacggga
     2821 tcgtgatgcg gcagtcggcg ctgccgggaa cctttcttct ggcagggcaa tcggtcggac
     2881 tcgaggtcaa cgctcggccg gtcgaggtac cggtgatcgt gccgcgactg gtggggctcg
     2941 ggctggaggc ggctacggag acgatcgtcg cgcggcacct cactgtccgg ggcatcactc
     3001 gtcgtgcggg tgcggacaac attgtgctga gccaggcacc tggaccgggg accagcgtgg
     3061 cccgcggcgc agggatggag ctctcggttg ggcgcgacga tcccggtgac gacgcgccgc
     3121 cgccaccacc gccgctgcca gtcatactgg ttcccgacgt ccgtgactcc ccggttgcga
     3181 ctgccgtggc agttgtgcga gccgcgggtt tcgtcaacct ggtggtggat tcggctgccg
     3241 cccctggacc ggtactgcaa tggaccattg cagcccaggc accagccccc ggcgcccgag
     3301 tgcgcccgca aacgctggtt cgcctgacgg cgacgggcgc cgccggggtc ccgacacccc
     3361 atctggtcga ccgcaaccct gacgatgccg ccctcgaggc ccggagcgcg aatctgcgga
     3421 tgcaggtcgt cgactcgcat gtcggcctcc gcctggtggg gagtgtggtc aggactcagg
     3481 taccagccgc cgatgtcctg gtggcgcccg gcacgcccat cagcgtcact atcgccaatc
     3541 caatcccctt cgtggtgtcg gccggcgcgg gaatcgccgg tttggccctg gcgacgggtg
     3601 tgggcgtccg gaagggttgg atcaagccgg cggttcgagt ccgtctcgaa gcggaaccgc
     3661 cggccctcgc tacgccagaa catgagctca tcgagaccga gctcagggtg accgtagagt
     3721 ttgaaccgct ggagctgtca gtccctgatg gcatcatctt gcgggaggaa ccataccatg
     3781 agtgactacg acatcacgct gggggccgcg ttgggctttg agccgccctc ggacaaggac
     3841 accagtctga cacgcggcgt gaccaaggcc gtcgagctgg tggccgaagc cttagaccag
     3901 atgccgctgc tccggaacct caaactgacg tccgatgtgg tggagcagat tgggagcttt
     3961 ctcaccacac cggtgagcgg gctggccctg ggcgcgtgga acaagcgggg cgagatccgg
     4021 aagtacgctg acccggagca gttcccgccg ggcagcaag
//
LOCUS       DASWKS010000284         2852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1635147, whole genome shotgun sequence.
ACCESSION   DASWKS010000284 DASWKS010000000
VERSION     DASWKS010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635147"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VGA78_08110"
     CDS             <1..579
                     /locus_tag="VGA78_08110"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9893874.1"
                     /translation="DVSLRAGAHQRFGLDPGRPVVLVTGGSQGALALNRTVAEWAESD
                     AGSIQILWATGSGSYANFRHLHRPPSVQVFDFLDPIAPAYAAADLAVTRAGMMTIAEL
                     CAWGLPSILVPLPTAAADHQTRNAQVMAEAGAALHLPQAQLTRQRLAETVGSLLSDPA
                     RRDRIAASARARGKPDATVEIVTLLGRLNGGL"
     gene            622..2151
                     /gene="murC"
                     /locus_tag="VGA78_08115"
     CDS             622..2151
                     /gene="murC"
                     /locus_tag="VGA78_08115"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX9893875.1"
                     /translation="MNLFLPSDSRPVHFVGIGGAGMGALALLALRRGVVVSGTDRSPE
                     GAADLAARGATVGPHDPGAVGRARAVVVSAAIPVDHPEIIRARELGIPIVSRKRALAD
                     LVATGRTIGIAGTHGKTTTTVMTTEALVAAGFDPTGLAGGRVATWGGNARVGGEALYV
                     VEADEYDQAFLELNPVVAVINNVEPEHLECYEGSVDAMEAAFATFAGRAQRAIIGVVD
                     AGSERVANRVSSSAARATRIWRFGFAAPDLSLGGVHATARGSEAVVRLPGGNTVTLRL
                     SVPGSHNLLNATGALGVVVSLGGKLEAALEALERFTGVGRRFERRGDAAGVTLVDDYA
                     HHATELKATLAAARQAFPGRRLVAVFQPHLYSRTAVQFGAMAEAVAGADLVFITEIYA
                     AREAPVPGVSGRLVADTARARGTQVLFMADPAQLLDAVADAVRPGDVVLTLGAGDITN
                     LGPALLKRLTAKEQGAGSREQGAGSRDQGAGSREQAAGSGEQGGGSQGPEAGSGEQGG
                     G"
     gene            2148..2825
                     /locus_tag="VGA78_08120"
     CDS             2148..2825
                     /locus_tag="VGA78_08120"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEX9893876.1"
                     /translation="MNRKHLFGLVAGLVGVLALGFLSPLLLKRASFFRVRRVEVVGAR
                     YLTGNEIVAGLKLARNASLFDRVAPIERAAIRIRGVRRASVRRRWPGTLVLRVEEIEP
                     VALTPSRSGLALLDAGGRVLPYDPTRVPADLPVVPADPLLARLVARVRETEPGLFRAI
                     VSASRQRQLVVFEAGDRRFLLRPDAGPAQLRALAAVIDDLARKGRRYRELDARFTDRV
                     FVRGKPS"
BASE COUNT          426 a          879 c         1070 g          477 t
ORIGIN      
        1 gatgtttctc tgcgcgctgg agcccaccag cgcttcggac tcgaccccgg gcggccggtg
       61 gtcttggtga ccggcggcag ccagggcgcg ctggcactca atcgaacggt ggcggagtgg
      121 gctgagagcg atgccggctc cattcagata ctctgggcga ccggttccgg cagctacgcg
      181 aattttcgcc acctgcatcg cccgccctcg gtgcaggttt tcgatttcct ggaccctatc
      241 gctcccgctt acgcggcggc ggatctggcc gtcacccggg ccggaatgat gaccatcgcg
      301 gagctttgcg cctggggact gccaagcatt ctggtgccgc tgcccacggc ggctgctgat
      361 catcagacgc gcaacgccca ggtcatggcc gaggcgggcg ccgcacttca tctgccccag
      421 gcgcagctca cccgtcagcg gctagccgag accgtcgggt cgctgctgtc cgacccggct
      481 cgtcgtgacc ggattgcggc cagtgcccgg gctcgtggaa aacccgacgc cactgtggaa
      541 atagtgactc tactggggcg gctaaatggg gggttgtgac gttgccaaat aattgccgtt
      601 acttacatta gggtgtcaac catgaacctc tttctcccca gcgattcccg gccggttcac
      661 ttcgtcggga tcggcggtgc ggggatgggt gcgctggctc ttctggcgct ccggaggggg
      721 gtagtggtga gcggcacgga ccgctcgccc gaaggggccg ccgatctggc cgcccgggga
      781 gcgacggtcg gtccccatga cccgggcgcg gtgggccgag cccgggcggt agtggtcagc
      841 gccgcgattc cggtcgatca tccggagatt attcgggcgc gggaactcgg cattcccatc
      901 gtgtcccgca aacgggcgtt ggccgatctg gtggcgacgg gacgcacgat cgggattgca
      961 ggtacgcacg gcaagaccac aacgacagtc atgacgaccg aagccctggt ggccgccggg
     1021 ttcgatccaa ccggactggc cggagggcgc gtggcgactt ggggcggcaa cgcgcgagtc
     1081 ggtggtgaag ccctctatgt ggtggaggcc gacgaatacg atcaggcgtt tctggagctg
     1141 aatccggtgg tggccgtgat caacaacgtg gagccggaac acctggaatg ctacgaggga
     1201 tcggtcgacg cgatggaggc ggcgttcgcc acctttgccg gtcgggccca acgcgcgatc
     1261 atcggagtcg tcgatgccgg gtcggagcgg gtggcgaatc gagtctccag ttccgccgcg
     1321 cgagccaccc ggatctggcg gtttgggttt gctgctccgg acctgagcct cggcggcgtg
     1381 cacgctactg ccaggggtag tgaggctgtg gttcggctgc ccggcgggaa cacggtcaca
     1441 ctgcggcttt cggtgccggg gagtcacaac ctgctcaacg ccaccggtgc gctaggcgtc
     1501 gtggtgtcgc tgggtggcaa gctcgaggcc gcgttggagg cgctggaacg cttcaccggg
     1561 gtaggccgcc gtttcgagcg gcggggggac gcggcgggtg taaccctggt cgacgattac
     1621 gcccaccacg ctaccgagct caaggccacc ttagccgcgg cgcggcaggc ctttccgggg
     1681 cggcgactgg tggcggtgtt ccagcctcac ctctactctc ggaccgcggt gcagttcgga
     1741 gccatggccg aggcggtggc gggtgccgat ctggtgttca tcaccgagat ctatgccgcg
     1801 cgcgaagccc cggtccccgg ggtgagcggt cgcctggtgg ccgatacggc ccgcgcccgg
     1861 ggcacccaag tgctgttcat ggccgatcca gcccagctgc tcgatgcggt cgctgacgcg
     1921 gtgcggccgg gcgatgtggt gttgaccctg ggcgccggcg acatcaccaa cctgggaccg
     1981 gcgctgctga aacggcttac agccaaagag cagggagcag ggagcaggga gcagggagca
     2041 ggaagcaggg accagggagc aggcagcagg gagcaggcag caggcagtgg ggagcagggg
     2101 ggcggaagcc agggaccgga agcgggaagc ggggagcagg gcggcgggtg aaccggaaac
     2161 acctgttcgg gctcgtcgcc ggcctggtcg gggtactcgc tctcggcttt ctgtccccgc
     2221 tcctgctcaa gcgtgccagc tttttccgag tacggcgggt ggaagtggtc ggggcccgat
     2281 acctgaccgg gaacgaaatc gtggcggggc tcaagctggc ccggaacgcg agcctcttcg
     2341 atcgggtggc accgatcgag cgcgccgcga tcaggattcg aggagtgcgc cgggcatcgg
     2401 tacggcgccg ctggcccggg accctggtgc tgcgggtcga ggagatcgaa ccggtcgcac
     2461 tcacgccgag ccgcagcggc ctcgccctgc tcgacgctgg tggccgggtg ctcccatatg
     2521 atccgacccg ggtgccggcc gacctaccgg tggtcccggc cgatcccctg ctggcgcggc
     2581 tggtggcccg ggtcagggaa actgagcctg ggttgttccg ggcgattgtc tcggcgtcgc
     2641 ggcagcgtca actggtggtg ttcgaagccg gtgatcggcg gttcctgttg cggccggatg
     2701 cgggcccggc ccaactgcgg gcactggccg cagtgatcga cgatctggcg cggaagggac
     2761 ggcggtaccg ggagctggat gcgcgtttta ccgaccgagt cttcgtacgg ggcaaaccat
     2821 cgtgacgcag gtgcagcggc tggtggccgg tc
//
LOCUS       DASWKS010000285        12670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_136272, whole genome shotgun sequence.
ACCESSION   DASWKS010000285 DASWKS010000000
VERSION     DASWKS010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136272"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VGA78_08125"
     CDS             complement(<1..462)
                     /locus_tag="VGA78_08125"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9893877.1"
                     /translation="MAWQPIVVGVDQSLAGVHAAETGVMLSNLMGVPCILVHGSQDVW
                     VGAAGGAGLLDVATMTEQVAEAARGAVERELEGKIPDAVRETLIVRPGPVARVLSDVV
                     NEQNAGLVVLGAKRHGTVARWLGGSTAKNAVRALHCPVLISTGPKRPERILV"
     gene            976..1554
                     /locus_tag="VGA78_08130"
     CDS             976..1554
                     /locus_tag="VGA78_08130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893878.1"
                     /translation="MWFARTTPVEAQGFGTASQSRQGFWIGGGVGQAFTDLACAICGG
                     EREGGGLSAYLRAGDTLTPAFLLGGEVLAWRGGQGDVSEHLEQVGVAGYWYPNPRHGW
                     FVKLGLGYSLYRASEEEEHLAARIFTGSLGAGYEMRVNPVLSIVPFVNLTATPNGNLN
                     RETTADGGFQAVRVADDLKLFVVQFGIGITRH"
     gene            1609..2856
                     /locus_tag="VGA78_08135"
     CDS             1609..2856
                     /locus_tag="VGA78_08135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893879.1"
                     /translation="MTNRMVRFTVSGMPLVLLCACAGSDGVSPDVEPTGEQSVAMRTW
                     VPGAGDTCPVEVHNQYATTGPDGKTYPTWHPPTDPGTGCNFGHEHGRDPRGSDLYDLV
                     GDIPFAYANEQLDVWDPTGKRHEDHVGHKVEWENNLHFTAGDGLGSFFEITCDVLVKL
                     HQGTHSKDAFTNNMHELVYHIACSDDTEMHVTLMATIGRPGEFIRACDGTRITVGTAT
                     PANSPAGGGQRKIPDRECILRHFLVSPGSNSNFSSALHESWETSSAVRRSDGHTLASF
                     DPYFQVFLPSRYHDPAATNITGRPIDACYEQEANGDRASGTLCAQSIGDGSVPVRFDD
                     PRSEFNGIRRRVDINSNRVNNLAGPNVWYTDPFGRNGRTEPFPGSVRQWIARVNNERG
                     FNLSGPTIGSEREYGGPGTHAPN"
     gene            2962..5358
                     /locus_tag="VGA78_08140"
     CDS             2962..5358
                     /locus_tag="VGA78_08140"
                     /inference="COORDINATES: protein motif:HMM:NF021665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G8 domain-containing protein"
                     /protein_id="HEX9893880.1"
                     /translation="MLITPELRRYILVLALGLVAACRSEPTEPTDAPGTPPLQRWSSP
                     SAWPDGEVPLAGAEVVVPADRRLLLDVSPPALRSLLIEGTVQVDETRDVALTAGWIVV
                     HGTLRAGTAERPYRKRLVITLNGPATDEIMGMGARVLGVMGGKLELFGAVRKSWTRLE
                     GTAAAGATQLTVGESIDWRVGDRIVVASSDLDPFQAEPLQISAVSGRTVTFTPALRWQ
                     HWGQLQTFADRTVDQRAEVGLLSRNITIQGDPVSAPVTGLGGHIMVMQGGEARLSGVE
                     LYQMGQKKVLARYPLHWHLRGPSEGQFLEHSAVWKTFNRCITIHGTDQIRLEQNVCYD
                     HIGHGIFLEDGAETGNVLTGNLGLVTRQPATGEQLLPSDVTPATFWITNPDNSFSGNV
                     AAGSRGFGFWFALPDQPTGLSTGRVLFPRRTPLREFSDNVAHSNRNNGLHVDNGPRPD
                     GTTETVSFRPRENPAAESPAVTAVFRNFRGYKHQGRAVWLRGHEHRLLNAVLADNAIG
                     ATFASSESFVEGSLFVGQTAIGGSAMPAGFPVRGYEFYDGRVGARNVTFVNYQPSAGR
                     QMSAIGFNRANAFPINTGNYAEQAQFVNANGVYLEEPRADRDGDRAAVFLDGDGSVTG
                     VPGHYVAANNPVLVTPDCGFRAEWNAWDCNRKFVRLAVRGINGEVIGPASVTRDDGAT
                     ATYVGTGGDPVSVSMSLPVGLRYTVRPLGTTPTRPQLFAYGLAAADWVRVTLPYTGAT
                     VRVQRDYDTSKSIPAAASLAELDASSGDRYYHDAGARMIHLKLMAKSGRDWAALFVVP
                     "
     gene            5523..6500
                     /gene="bla"
                     /locus_tag="VGA78_08145"
     CDS             5523..6500
                     /gene="bla"
                     /locus_tag="VGA78_08145"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF033103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HEX9893881.1"
                     /translation="MAWLLGSSASAAAQAQDPGLARLEAELGRLSAIARGKVGVGIVH
                     LETGRELYLNPDEPFPMASTFKVPVAVQLFSLVDQRRVRLDSLVTLRPQDLHPGSGTL
                     TSLFDDPGVSLSLRNLVELMLLISDNSATDLVLKAAGNGPAVNARLAELGVQGISVDR
                     PTILLIADAIGVSTLPPENEWNKQTFGKLVRQVTDSGRQAARETFLTDRRDTATPRGM
                     AKLLTKIWRKEGLSPASADLLIDIMFRCETGPNRIKGLLPPSIRVAHKTGTLNMGIAN
                     DVGIMELPDGAGHVVIAAFVKESQATSELQERTIAHVARATYDYFLFNR"
     gene            complement(6513..7175)
                     /locus_tag="VGA78_08150"
     CDS             complement(6513..7175)
                     /locus_tag="VGA78_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893882.1"
                     /translation="MFADRRSFLEQLTLGTASLAALGQAAPESLAAQAGGHWDLSWTS
                     RLKGKRRAVFDVPEIEDGYGVWRAIIWKKQYSQVFNFPESTLSMVLILRHDGIALAMN
                     QDFWERYHIGPDKGVKDPVTGEPTRRNPVLDRTGAHALPEQFGDFTLEDFLKGGGIVL
                     GCALALQDCIDLIARTDKVDLAEASRKARSMLAPGVIMQPSGVFAATLAQEYGCRYVR
                     AS"
     gene            complement(7204..8292)
                     /locus_tag="VGA78_08155"
     CDS             complement(7204..8292)
                     /locus_tag="VGA78_08155"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX9893883.1"
                     /translation="MSDPQWHDLGPVEELRLRTLRQINVGRTRLALSYVNGEFACVSG
                     ACNHAGGPLGEGRLEDEYIVCPWHYYKFHRRTGEGEPGFEDDKVPSYDLRVESGHVLV
                     NLNPASPRHLKHHDPHPLTRRLMREPGPIRVAGISTTVMDENNPRESTSERLLQIALE
                     HAGITCGCETRLLRLSGLKFRACEGFYSKSAHACTWPCSITQMDPGDEMDRVYDAMVF
                     WADVIMLATPIRWGAASSLYYRMAERLNCVQNQITIRNRVLIQNKVAAFIVTGGQDNV
                     QGVVGHLLTFFGELGFLFPQFPFIGHSRGWSAEDMENNVSEVLNSVDLKEGTEALMDR
                     AVSLASTVLGREAPEHIARGGRKAHHLV"
     gene            complement(8355..9317)
                     /locus_tag="VGA78_08160"
     CDS             complement(8355..9317)
                     /locus_tag="VGA78_08160"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEX9893884.1"
                     /translation="MSDLNLLGIHHLTAVSASIRENLRFYTQALGMRLVKRSVNQDDV
                     SAYHLFYADAVGTPGTDLTFFDWNLPRERRGTHSIIRTSLRVRGPAALEWWAQRLTGL
                     KVKANQVTQSDGRATLDFEDPEGQRLSLVDDGGLGDDPKPWDQSPVPAEYQIRGLGPI
                     VMSVPKLGPTETVLTQVMNLRAVREYPHPDPAQHDVVVFEMGGRGPHAELHVAVQPDL
                     PAARLGAGGVHHVAFRTPTREQYDQWAERLNTLHIPNSGPVDRYYFRSLYFREPNGIL
                     FEIATDGPGFGVDEDPATLGEHIALPPFLETQRAEIVTNLKPLD"
     gene            complement(9388..9930)
                     /locus_tag="VGA78_08165"
     CDS             complement(9388..9930)
                     /locus_tag="VGA78_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893885.1"
                     /translation="MNQSTVTASFGDALRADGPVPTDREGRMMLYGQFMGDWQAEVVD
                     FLQGPRRTSTGEVHFAWVLEGRAIQDVWIVPARADRQPDAAASGLNWYGTTLRVYDPN
                     SDTWRITWINPGTGDEIRLVGRRQGEEIVQEGTLENGVPVRWIFSDIAPRSCRWRCDM
                     SPDGGTSWKLAVEAHLSRVG"
     gene            complement(9949..11415)
                     /locus_tag="VGA78_08170"
     CDS             complement(9949..11415)
                     /locus_tag="VGA78_08170"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HEX9893886.1"
                     /translation="MRLIRSLPALLATAALLGAVPALSAQITRPEYVARRDSLAARVG
                     DGVVIALGGVTPLSDFGPFYQLPAFRYLTGYEYADAALIMAVRGGRGTATLFVKRTGA
                     RTSIYYGQEPDSAALQRDLGLASRPLSQLTEVVDSLLRAGSVPVFELRDFAAADFARQ
                     DSLTRGGQFVKALAARHQGLEVRDAHAIVDLLRARKSTAEQELIRKAAAISAEGHTEL
                     MRRIENGMHEYDLQAIIEYSFRRAGAERPAYGSIVGSGPLTLQLHYMKDRRAMQPGEV
                     VVVDAGAEYQGYAADVTRTLPVSGRYSPEQRAIYQLVRDAQAAAERNSRAGMSRQAAL
                     DSSIVVRAKGLAALGLIESPDATLDLPWQATCDTTPQACRQVTLFTIHGITHGLGLEV
                     HDPIQAYQDGMFKVGDAFVIEPGIYLSPRLLDMLPDTPRNRAFIAKVRKTVERYANTG
                     VRIEDSYLLTEHGLERISMAPREIDEIEALTRRRAPIP"
     gene            11648..11995
                     /locus_tag="VGA78_08175"
     CDS             11648..11995
                     /locus_tag="VGA78_08175"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9893887.1"
                     /translation="MPPEPSELLRGTLEMLVLKSLSLAPLHGWGIAHRIDQLSKDAFE
                     VQQGSLYPALRRMVRKGWIKSEWRTTENNRRARYYLLTRAGRKQLETETRAWERASTA
                     VNGILRVRTAEGA"
     gene            11992..>12670
                     /locus_tag="VGA78_08180"
     CDS             11992..>12670
                     /locus_tag="VGA78_08180"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease prefix domain 1-containing protein"
                     /protein_id="HEX9893888.1"
                     /translation="MSLFSDLLERLRALAFRGREERDMDEELRFHLEREAVERIRNGA
                     EPEQARREALLAFGGVEQYKEAVRDARGTRPLEELAADLRYALRGLSRNPGFTATAVL
                     VLGLGLGATTAVFSVLYSVVLAELPYPDPDRLVIVVEKNSPTNLWNISTADATAIREQ
                     QKSFKAWGEVTRGEAALSGNGNPARVMVGRASAGFFQALGIPAARGRLIQPPDEAAEA
                     PAVLVVSH"
BASE COUNT         2091 a         4223 c         4237 g         2119 t
ORIGIN      
        1 gaccagaatc cgctccggcc gcttgggccc ggtggagatg aggacggggc agtgcagggc
       61 ccgcaccgcg ttcttggcgg tgctgccgcc cagccaacgg gccacggttc cgtgccgctt
      121 ggcgccgagc accaccaatc cggcgttctg ttcgttcacc acgtcgctca gtacccgagc
      181 caccggtccg ggacgaacga tgagggtctc acgcacggca tcggggatct ttccctcgag
      241 ctctcgttcg accgctcctc gcgcggcctc ggcgacctgc tccgtcatgg tggcgacgtc
      301 gagcagtccc gcgccgcccg ccgccccgac ccagacgtcc tgcgacccgt ggaccaggat
      361 gcagggaacg cccatcaggt tggagagcat caccccggtt tcagccgcgt gcactcccgc
      421 cagcgattga tcgacgccga ccacgattgg ttgccaagcc atgaagcctc ccgcctcctt
      481 ctcttggttc ctgctccctg ctccctgctt cctgctccct gctccctgct ccctgctccc
      541 tgcttcctgc ttcctgttgg tgttgtcaca cctcgcgtac cgaagctcac atcctctgta
      601 tgagactatg acaaagtcgc tgtgaagccg gctttcggat ggggtgacgt tgcaacatcg
      661 catcgggaca ccaggacggg gctgccgcac cacacatgta acgaaaggag ggcgtgcttc
      721 tttcccctcc caagtcattg cgggcgagct acttcaggcc tagcgccaaa cggaacattg
      781 gtctcgctcg aagtcctctc atagaccagg cagacgacca tgtcgttcga tgatcgcaaa
      841 tcgcgccgcc gtgggcggcg gccaatccag tttgggcccg gcagtaaccc gacagtcctg
      901 gcaccggccc gcgtcgggtc gatgcgacgg cccgatccag cgctgttaag gatctgcacg
      961 ctgcttctct gcctgatgtg gttcgcgcgt accacaccgg tcgaggcgca gggtttcgga
     1021 accgccagtc aatcacgcca aggcttctgg atcggcggtg gtgtgggtca ggccttcacc
     1081 gatcttgcct gcgccatttg cggcggcgag cgcgaaggcg gcggcctctc ggcttacctg
     1141 cgcgccggcg acacactcac gccggcattc ctgctgggcg gggaggtgct cgcctggcga
     1201 ggcgggcagg gcgacgtgag cgagcacctg gagcaggtcg gtgtcgccgg ctactggtat
     1261 cccaacccgc ggcacgggtg gttcgtgaag ctgggactgg ggtactccct ctaccgtgcc
     1321 agtgaggagg aggaacacct cgcggcccgg atcttcaccg gcagcctggg tgccggctat
     1381 gaaatgcggg tgaacccggt gttgtcgatc gtgccgttcg tgaatctcac cgctacgccc
     1441 aatgggaatc tcaatcggga gaccaccgcc gacggcggct tccaggccgt ccgggtggcg
     1501 gacgacctga agctgttcgt ggtccagttc ggcattggga ttaccaggca ttagggagcg
     1561 aaggcgagaa accccgcaac gtcaggccag tctctggggg gagatcgtat gacgaatcga
     1621 atggtgcggt tcacggtgtc gggaatgccc ctggtgctgc tgtgcgcctg tgccggctcc
     1681 gacggggtgt ctcccgacgt tgagccgacc ggcgagcagt ccgtcgcaat gcgcacctgg
     1741 gtgccgggcg cgggagatac ctgcccggtc gaggtgcaca accagtacgc gaccacgggt
     1801 cccgacggaa agacctatcc cacctggcat ccccccaccg atcccgggac gggctgcaac
     1861 ttcggccacg agcacggacg ggatcccaga ggctcggatc tctacgatct ggtgggcgac
     1921 attcccttcg cgtatgccaa cgagcagctc gatgtctggg accccaccgg caagcggcac
     1981 gaagaccatg tgggtcacaa ggtcgaatgg gagaacaacc tccacttcac cgccggcgac
     2041 gggctgggct cgttcttcga gatcacctgc gacgtcctgg tgaagctgca ccagggcacc
     2101 cactccaagg acgccttcac caacaacatg cacgagctgg tgtaccacat cgcctgcagc
     2161 gacgacaccg agatgcacgt gaccctcatg gccaccatcg gccggccggg cgagttcatc
     2221 cgcgcctgcg atgggacccg gatcacggtg ggcacggcga cgcccgccaa ttcgcccgca
     2281 ggcggaggcc agcgcaagat cccggatcgg gagtgcatcc tgcgccattt cctggtgtcg
     2341 ccgggttcca attccaattt cagctcggcg ctgcacgaga gctgggagac ctcgagcgcg
     2401 gtccggcgct cggacggaca tactctggcc agcttcgacc cgtacttcca ggtcttcctg
     2461 ccgagccggt atcatgatcc ggcggcgacc aacatcaccg gtcgtccgat cgatgcctgc
     2521 tacgaacagg aagcgaacgg cgaccgggcc agcgggaccc tctgcgccca gtcgatcggc
     2581 gacggatcag tgccggtgcg cttcgacgat ccccgatcgg agttcaacgg catccggcgc
     2641 cgggtcgaca tcaattccaa ccgggtgaac aacctggcag ggcccaacgt ctggtacacc
     2701 gatcccttcg gccgtaacgg caggaccgaa ccgttcccgg ggtcggtccg gcaatggatc
     2761 gcccgggtga acaacgagcg gggattcaac ctgtcgggcc ccacgatcgg aagcgaacgg
     2821 gagtacggag ggccgggaac tcatgcgccc aactaggagc gaggagagag gagaatggag
     2881 agaggagcaa ctcctcactc ctttctcgtt tctcctttct cctgacgcag tcggcagctt
     2941 tcgaatgcga ggacacgacc aatgctgata actcccgagc tgcgccggta tatcctggtc
     3001 ctggccctgg gtctggttgc cgcctgtcgc agtgagccga ccgagcccac ggatgcaccc
     3061 gggacacccc cgctgcagcg gtggtcctca ccctcggcct ggcccgatgg cgaggttccc
     3121 ctggccggtg ccgaggtggt ggtgccggcg gaccggcggc tgctgctcga cgtgagcccg
     3181 ccggcgctcc gcagtcttct gatcgagggc acggtccagg tggatgagac ccgggacgtg
     3241 gcgctcacgg ccggctggat cgtggtgcac gggacgcttc gggccggcac ggccgagcga
     3301 ccctatcgca agcggctggt gatcacactc aacgggcccg cgaccgatga gatcatgggt
     3361 atgggcgccc gggtgttagg cgtgatgggc gggaagctgg agctgttcgg ggcggtgcgg
     3421 aagagctgga cccggctgga gggcacggcc gccgcggggg cgacccagct cacggtgggc
     3481 gagagcatcg actggcgggt gggcgatcgg atagtggtgg cctcgagcga tctcgatccg
     3541 ttccaggcgg agccgctgca gatttccgcc gtctcgggcc gaaccgtcac gttcacgccc
     3601 gcgctccgat ggcagcactg ggggcagctg cagaccttcg ccgaccgtac ggtcgaccag
     3661 cgggccgagg tcggcctcct ctcccgcaac atcaccatcc agggcgaccc ggtcagcgcc
     3721 ccggtcaccg ggttgggcgg ccacatcatg gtgatgcagg gcggcgaggc ccggttgtcg
     3781 ggcgtcgagc tctaccagat gggacagaag aaggtcctgg cccgctaccc gctccactgg
     3841 cacctgcggg gcccgtcgga gggacaattc ctggagcaca gcgcggtgtg gaagacgttc
     3901 aaccgctgca tcacgatcca cggcaccgat cagatccggc tggagcagaa cgtctgctac
     3961 gatcacatcg gtcacgggat cttcctcgag gatggggccg agaccgggaa cgtgttgacc
     4021 gggaatctgg ggctggtgac ccggcagccg gccaccggcg agcagctgct gccctcggat
     4081 gtgaccccgg ccacgttctg gatcaccaat cccgataaca gcttcagcgg caacgtcgcg
     4141 gccggctcgc ggggcttcgg cttctggttc gcgctgccgg atcagcccac cggcctctcc
     4201 acgggcagag tgctctttcc gcgccggact ccgctgcggg agttcagcga caacgtggcg
     4261 cactccaacc ggaataacgg attacacgtg gacaacggcc ctcggccgga cggcaccacc
     4321 gagacggtct cgttccgtcc ccgcgagaat cccgcggcgg agtcgccggc ggtgacggcg
     4381 gtgttccgga acttccgggg ttacaagcat cagggtcggg cggtgtggct tcgggggcac
     4441 gagcaccggc tattgaacgc ggtgctggcc gacaatgcca tcggcgccac cttcgcctcg
     4501 tccgagagtt tcgtggaagg gtccctcttt gtggggcaga cggcgatcgg cggcagcgcg
     4561 atgccggccg ggttcccggt ccggggctac gagttctatg atggccgagt gggcgcccgc
     4621 aacgtcactt tcgtgaacta ccagcccagc gccggacggc agatgagcgc catcggcttc
     4681 aaccgcgcca acgcctttcc catcaacacc ggcaactacg ccgagcaggc gcaattcgtg
     4741 aacgccaacg gggtgtacct ggaggagccc cgggccgacc gggacggcga ccgcgcggcg
     4801 gtattcctgg acggtgacgg cagcgtcacc ggcgttcccg gccattatgt ggcggccaat
     4861 aaccccgtgc tggtgacgcc tgattgcggc tttcgagccg aatggaacgc gtgggactgc
     4921 aaccgcaagt tcgtgcggct ggcggtgcgc gggatcaacg gcgaagtcat cggtccggcg
     4981 agcgtgaccc gggacgacgg cgcgaccgcg acctatgtcg gcaccggagg ggacccggtg
     5041 agcgtgtcga tgtccctccc ggtcggtctc cggtacacgg tccgcccgct gggtaccacg
     5101 ccgactcgtc cccagctgtt cgcctatggg cttgcggccg cggattgggt gcgcgtgacc
     5161 ctgccctata ccggcgctac ggttcgggtc cagcgggact acgacacctc gaagtcgatc
     5221 ccggccgcgg ccagcctggc ggagttggac gcttccagcg gcgaccggta ctaccacgac
     5281 gccggggcgc ggatgatcca cctcaagctg atggcgaaga gcggaaggga ctgggcggcg
     5341 ctgttcgtgg ttccctgaag ctcgacccgc ccggaccatt gacgattgtc gattgacgat
     5401 tgacaattga ggcctgaggt tcgggcgtac cagtcgtcaa tctccaactg ccaccctcca
     5461 cgaacggttt cctcatgtcc aacggccgct ggctccgagt tttgcatcca atcttgtatg
     5521 ccatggcgtg gctgctgggg tcttcggctt cggccgccgc ccaggcccag gatcccggcc
     5581 tcgcccggct ggaggccgag ctgggccgcc tcagtgcgat tgcccggggc aaggtcgggg
     5641 tggggatcgt gcacctcgag accgggcggg agctttatct caaccccgac gagcccttcc
     5701 cgatggccag caccttcaag gtgccggtgg cggtgcagct cttcagcctg gtggatcagc
     5761 ggcgggtccg gctggacagc ctggtgacgt tgcgccccca ggatctccat ccgggcagcg
     5821 ggaccctcac cagtctgttc gacgacccgg gggtgtcgct gtcattgcgg aatctggtgg
     5881 agctgatgct cctcatctcc gacaacagcg cgaccgatct ggtgctcaag gcggccggca
     5941 acggtcccgc agtcaacgcc cggctggccg agctgggggt gcaggggatc tcggtcgacc
     6001 ggcccaccat cctgctgatc gccgacgcga tcggggtgag cacgctgccc cccgagaacg
     6061 agtggaataa gcagaccttc gggaagctgg tgaggcaggt cacggacagc ggccggcaag
     6121 ccgcgcgcga gacctttctc acggaccggc gcgacaccgc caccccacga ggcatggcga
     6181 agctcctgac caagatctgg cgtaaggaag ggctctcgcc cgccagcgcc gacctgctga
     6241 tcgacatcat gttccgttgc gagaccggcc cgaaccggat caagggcctg ctgccgccct
     6301 cgatccgggt ggcccacaag accggcacgc tgaacatggg gatcgccaac gacgtcggta
     6361 tcatggagct gccggacggg gccggacacg tggtgatcgc ggcgttcgtc aaggaatcgc
     6421 aggcaacctc ggagctgcag gagcggacca tcgcccacgt ggccagggcg acgtacgact
     6481 atttcctctt taaccgataa tcggaggtcg gctcagctgg cgcgtacgta ccggcagccg
     6541 tactcctgtg ccagggtagc cgcgaagacc cccgatggct gcatgatgac gccgggggcg
     6601 agcatcgaac gggccttgcg gctcgcttcg gccaggtcga ccttatcggt gcgcgctatg
     6661 aggtcgatgc aatcctgaag cgccagggcg cagcctaaca cgatcccgcc gcctttcagg
     6721 aagtcctcca gggtgaagtc cccgaactgc tccgggagtg catgcgcccc agtccgatcc
     6781 agcaccggat tgcgtcgagt cggctctccg gtgacgggat ccttgacgcc cttgtcgggc
     6841 ccgatgtggt agcgctccca aaagtcctgg ttcatggcca gggcaatccc gtcgtgtcgc
     6901 aggatcagca ccatactgag cgtcgattcg gggaagttga atacctggct gtactgcttc
     6961 ttccagatga tggcgcgcca gacgccgtac ccgtcctcga tctcgggaac gtcgaacacc
     7021 gcccgacgct ttcccttgag ccgggaggtc caactcaggt cccaatgacc acccgcctga
     7081 gcggctaggg actccggggc cgcctgcccg agcgccgcca gcgaggcggt gccgagggtc
     7141 aactgctcga ggaaactgcg acggtcagcg aacattcggc ctccagtagc tgtgaaacag
     7201 ttctcacacc aggtgatgag ccttgcgtcc acccctggcg atatgctccg gcgcttcccg
     7261 gcccagcacg gtgctggcca gtgacaccgc ccggtccatc agcgcctcgg tgccttcctt
     7321 gaggtcgacg ctgttcagga cctcgctcac gttgttttcc atgtcctcgg ccgaccagcc
     7381 gcgcgaatgg ccgatgaacg ggaactgggg aaacagaaac cccagctcgc cgaagaaggt
     7441 gaggaggtgg cccactacac cctgcacgtt gtcctggccc cccgtcacga tgaaggcggc
     7501 caccttgttc tggatcagca cccggttccg gatggtgatc tggttctgga cgcagttgag
     7561 ccgctcggcc atccggtagt acaggctgct ggcggcgccc cagcgaatgg gggtggccag
     7621 catgatcaca tcggcccaga acaccatggc atcatagacc cggtccatct cgtcacccgg
     7681 atccatctgg gtgatggagc agggccaggt gcaggcgtgg gcgctcttgg aatagaagcc
     7741 ctcgcaggcc cggaacttga gcccgctcaa tcgcagcagc cgggtttcgc acccgcaggt
     7801 gatgccggcg tgttccaggg cgatctgcag cagccgttcc gaggtggact cccgcgggtt
     7861 gttctcgtcc atcaccgtgg tggagatccc agccacccgg atcgggcccg gctcccgcat
     7921 cagcctgcgg gtcaggggat ggggatcgtg gtgcttgagg tgccggggtg aggcggggtt
     7981 cagattcacc aacacatggc cgctctccac cctgagatcg taactcggca ccttgtcgtc
     8041 ctcgaatccc ggctcccctt caccggtccg ccggtggaac ttgtagtagt gccagggaca
     8101 gacgatgtac tcatcctcca ggcgaccttc gcccagcggg cccccggcgt gattgcaggc
     8161 ccccgataca caggcgaact ccccgttcac ataggagagc gccagccggg tacggcccac
     8221 gttgatctgc cgcagggtgc gcagccgcag ctcctcgacg ggaccgaggt cgtgccattg
     8281 ggggtcagac atgagaactc cagtggagat gccgtccaac tcagtcctca gtactcagtc
     8341 ctcagccctg tccgttagtc gagcggcttc aggttggtga cgatctcggc ccgctgggtc
     8401 tcgaggaagg gaggcaaggc gatgtgttcg cccagcgtgg ccgggtcctc gtccactcca
     8461 aacccgggtc cgtcagtcgc gatctcgaac aggatcccgt tgggctcccg gaaatacagg
     8521 ctgcggaaat agtagcggtc gaccgggccg ctgttgggga tgtggagggt gttcagccgt
     8581 tcggcccact gatcgtactg ctcgcgggtg ggcgtgcgga aggcgacgtg atgcacgccg
     8641 cccgcgccca atcgcgcggc agggaggtcg ggctggaccg ccacgtggag ctccgcatgg
     8701 ggcccgcgcc cgcccatttc gaacaccacc acgtcgtgct gggcggggtc ggggtggggg
     8761 tactcgcgga ccgcccgcag gttcatcacc tgggtcagga ccgtctcggt ggggcccagc
     8821 ttgggcacgc tcatgacgat gggacccagc ccccggatct ggtactccgc cggcaccggg
     8881 ctctggtccc agggcttggg gtcgtcgccc agtcctccgt cgtccaccag gctgagtcgt
     8941 tggccttccg gatcctcgaa gtcgagggtg gcccgaccgt cgctctgcgt gacctggttc
     9001 gccttcacct tgagcccggt cagccgctgg gcccaccact ccagggccgc ggggcctcga
     9061 actcggaggc tggtgcggat gatgctgtgg gtgccgcggc gttcccgggg caggttccag
     9121 tcgaagaagg tcagatcggt gcccggggtc ccgaccgcgt cggcgtagaa caggtggtac
     9181 gcgctcacgt cgtcctggtt gacgctgcgc ttgaccaggc gcatgccgag cgcctgagta
     9241 tagaaccgga ggttttcgcg gatgctggcg gaaaccgcgg taaggtggtg gatcccgagc
     9301 agattgaggt cggacatgga gcctccggtc agcctgaaag tactcggttc ctgaccggcc
     9361 gcgattccag gcctccggcg gggagctcta cccgacccgg ctgaggtggg cctcgaccgc
     9421 cagcttccag ctcgtgcccc cgtcgggtga catgtcgcag cgccaacggc aggaacgggg
     9481 agcgatgtcg gaaaagatcc accggaccgg gaccccgttc tcgagggtcc cctcctgaac
     9541 gatctcctcg ccttgccgcc gccctaccag cctgatctcg tccccggttc ccgggttgat
     9601 ccaggtgatc cgccaggtgt cggagttggg atcgtacact ctgagtgtag tcccgtacca
     9661 gttgagaccg ctcgcggcgg cgtccggttg acgatccgcc cgcgccggaa cgatccacac
     9721 gtcctgaatg gcgcgtccct cgagaaccca ggcgaaatgc acctcacccg tgctggtccg
     9781 gcggggcccc tgcaggaaat cgacgacctc cgcctgccag tcgcccatga attgcccgta
     9841 cagcatcatc cgaccctccc ggtcggtggg caccggtccg tcggcgcgca gggcatcgcc
     9901 gaaagaggcc gtcactgtcg attggttcac gatgacactc ctgggcggct aggggatcgg
     9961 cgctcgccgc cgggtcagcg cctcgatctc gtcgatctcc cgcggcgcca tgctgatccg
    10021 ttccagcccg tgttcagtga gaaggtacga gtcctcgatc ctcacgccgg tattggcgta
    10081 ccgctcgacc gtcttccgca ccttcgcgat gaaggcgcgg ttcctcgggg tgtcgggcag
    10141 catgtcgagc agtcgggggc tgaggtagat ccccggttcg atgacgaacg cgtcacccac
    10201 cttgaacatc ccgtcctgat acgcctggat cggatcgtgt acctcgagtc ccagtccgtg
    10261 cgtgatacca tggatcgtga agagcgtgac ctggcggcac gcctggggcg tcgtgtcgca
    10321 ggtggcctgc caggggagat ccagggtggc gtcgggtgac tcgatcaggc caagcgcggc
    10381 gagcccttta gcgcgcacca cgatcgagct gtccagggcg gcttgccggg acatgccggc
    10441 ccgggaattc cgctccgccg cggcctgggc atcgcgcacc agctgataga tggctcgctg
    10501 ttccggtgaa tagcggccgc tcaccggtag ggtgcgggtc acgtcggcgg catacccctg
    10561 gtactcggcg cccgcgtcga ccaccaccac ctcgcccggc tgcatggcgc gccggtcctt
    10621 catgtagtgc agctgcagcg tcagcggccc ggagcccacg atcgatccgt acgcgggccg
    10681 ctcggcgccg gcccggcgga agctgtactc gatgatcgcc tgcaggtcgt actcgtgcat
    10741 tccgttttcg atccggcgca tcagctcggt atgaccttcg gccgagatgg cggccgcttt
    10801 ccggatcaac tcctgctccg ccgtgctctt gcgggcccgc aacaggtcca cgatggcatg
    10861 ggcgtcccgg acttccagcc cctggtggcg ggccgccagc gccttcacga actggccccc
    10921 ccgggtgagc gagtcctgcc gggcgaaatc ggcagccgcg aaatcccgca gctcgaagac
    10981 cgggacactc cccgcccgca gcagcgagtc gaccacctcc gtgagctgac tgagggggcg
    11041 agacgccagc ccgagatccc gctgcagggc ggcggaatcg ggctcctgcc cgtagtagat
    11101 cgaggttcgc gccccggtcc gcttcacgaa cagggtcgcg gttccccggc cgccccggac
    11161 cgccatgatc aaagcggcgt cggcgtactc gtacccggtg agatagcgaa aggccgggag
    11221 ctggtagaag ggaccgaagt cgctgagcgg cgtgaccccg cccagggcga tgaccacgcc
    11281 gtcgccaacc cgggcggcca gcgagtcgcg ccgggcgacg tactcgggcc gggtgatctg
    11341 cgcggaaagc gccggcaccg cgccgagcag cgcagcggtc gcgagcaggg cgggcaggga
    11401 acggatgagg cgcatcgacc gatccacgct gaacggtaaa ccggaaacgg tgaacagtga
    11461 actgtaacgg tgaacggtga acggtgaagc gtgaacggtg aacggtaaac aggtcccttc
    11521 ccgcccacgg ggcatcgaaa ccgggcaggg gccgggcctg caaacctttt ccggagtcgc
    11581 agcgtctctc cttttgattg gctggagaag tcggcctctg ttctccagct cacctagagg
    11641 agctaccgtg ccgcccgaac cctccgaact gctccggggc accctggaga tgctggtact
    11701 caagtcgctc tccctcgccc ccctccacgg ctggggcatc gcccatcgca tcgatcagct
    11761 ctccaaagac gccttcgagg tccagcaggg ctccctctac cccgccctga ggcggatggt
    11821 ccggaagggc tggatcaaga gcgaatggcg gaccaccgag aacaaccgcc gcgcccggta
    11881 ctacctgctg acccgggccg gccgaaagca gctcgaaacg gaaaccaggg cctgggagcg
    11941 ggcatcgacc gccgtcaacg gcatcctcag ggtacggaca gcggagggcg catgagcctt
    12001 ttctccgatc tgctcgagcg gctccgcgcc ctggccttcc ggggtcggga agagcgcgac
    12061 atggacgaag agctgcgctt tcatctggag cgggaggcgg tggagcggat ccggaacggc
    12121 gccgagcccg agcaggcgcg gcgcgaggcg ctactggcat tcggcggggt ggagcagtac
    12181 aaggaggcgg tgcgcgacgc gcgcgggacc cgcccgctcg aggaactggc tgcggacctt
    12241 cgctacgccc tccggggctt gagccgcaac cccggcttca ccgctaccgc ggtgctggtg
    12301 ctcggtctgg gactgggcgc caccacggcg gtgttcagcg tgctgtactc ggtggtgctg
    12361 gccgagctgc cctatcccga ccctgaccga ctggtcatcg tggtcgagaa gaactccccg
    12421 accaacctat ggaacatctc gaccgcggac gcgaccgcca tccgggagca gcagaagagc
    12481 ttcaaggcgt ggggcgaggt gacccggggc gaggctgcgc tctccggtaa cggcaacccg
    12541 gcccgcgtga tggtgggacg ggcctcggcc ggcttcttcc aggctttggg gattcccgca
    12601 gcgaggggcc ggctgatcca gccgcccgac gaggccgccg aagccccagc ggtcctggtg
    12661 gtgtcgcacg
//
LOCUS       DASWKS010000286         9028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2737209, whole genome shotgun sequence.
ACCESSION   DASWKS010000286 DASWKS010000000
VERSION     DASWKS010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2737209"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VGA78_08185"
     CDS             complement(<1..184)
                     /locus_tag="VGA78_08185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893889.1"
                     /translation="MRRFSVVLGLAALLAGSAAAQTNGAGKQPISMAGINRVAGKVDS
                     VFVERTARQFTVGGGDW"
     gene            247..1155
                     /locus_tag="VGA78_08190"
     CDS             247..1155
                     /locus_tag="VGA78_08190"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9893890.1"
                     /translation="MNPIADGAILADLEYLGAPGNIATCFLETDDGLAVVDPGPATTY
                     DRFREVVRQLGATLDDVRILLLTHIHLDHSGAAGWLAEAQPRLRVYVHERGAPHLADP
                     GRLLKSATMIYGDRMLELWGEVKPVPPGAIIPLQGGERLQLGGRSIASAYTPGHAWHH
                     LAWFDEASGIAFTGDVLGEHLPPSDVAIPVTPPPDIDVELMIESGDRILEWQPARLFP
                     THFGPVNDPPRFAREHATRLVRWSERVRSSLDDPGTDEERAQRVAALGRRDLEAVLPA
                     ELHSRIPEDALYGNWFGLARYWRKKA"
     gene            1168..2178
                     /locus_tag="VGA78_08195"
     CDS             1168..2178
                     /locus_tag="VGA78_08195"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX9893891.1"
                     /translation="MRSFRLTAVGLIVFPALLAGQARPPAHFQKLAHTYSIVAWDSAT
                     GDLGVAVQSKFPNVGGIVPWARAGVGAVATQSLANTAYGEAGLDLMARGATANEALRI
                     IMRSDTMLADRQVGLIDAIGNSTSFTGANTFDWAGGRTGGPKGSLGGKGDVITGRDYA
                     AQANIMVSDQTVRNLAESFERSRGPLGDRLIAALKAGQAGGGDKRGMQSAALLVVRKD
                     GGYLGANDRFIDIRVYDAVDPIAELERLYALHKLHFFPSEPADLLPLTPALVAQLEPI
                     LLREPQGQSEKWLPRPQGTPNQTFLEALRNFMYWENYDVRVRMDGKIDRVVLSDILAK
                     RQ"
     gene            2582..3007
                     /locus_tag="VGA78_08200"
     CDS             2582..3007
                     /locus_tag="VGA78_08200"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9893892.1"
                     /translation="MPARRLPHGHALSFGGRPAQTIDFLEQAFGAEATELTTRPDGTP
                     WHGEVRIGDSMVMLSQAQGEWKPNQSSLYLYVPDADTTYRRALAAGATSVMEPTDTFY
                     RNRECGVKHGGGNYWWIATRVAEVSREEVERRARSDVKH"
     gene            complement(3169..4053)
                     /locus_tag="VGA78_08205"
     CDS             complement(3169..4053)
                     /locus_tag="VGA78_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX9893893.1"
                     /translation="MTVKTLLLAALGVVTLGFVLVWVRHLRSGVGSRSADEAPAPPTL
                     FQLIVGFGTNFFDTLGIGSYAPTTAIFKLRGMVPDERIPGTLSVGHTLATITQAFIFM
                     TLVEVDGITLALMIGTAVAGAYLGAGIVSRWPRRNVQIGMGVALLAAATLFTMNNLKI
                     FPGGGDALALSSTRLGVGMAGNFLLGSLMTIGIGLYAPCMILVSLLGMNPQAAFPIMM
                     GSCAFLMPVASVKFLEARSYSVRPALGLVLGGIPAVLIAAFIVKSLPLTMVRWLVVVV
                     VTYSSIMMLRSAYRERAR"
     gene            complement(4083..6143)
                     /locus_tag="VGA78_08210"
     CDS             complement(4083..6143)
                     /locus_tag="VGA78_08210"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9893894.1"
                     /translation="MASVLSPAQVPPVAERRAYSVTRFGERLDDPYFWMRDRGDPAVR
                     AYLEAENTYAESMLAPEKEVCEGLYREMLGRIKQTDLTVPFLDRGFFYYTRTEEGEQY
                     PIHCRKRGSLEASEEVLLDLNQLALGKPFMALGEFDVTDDGKLLAYSTDETGFRDYVL
                     EVKDLVTGAKLPLRIERSSSAAWTPDGAWLFYVTEDDAKRPSRLWRHRLGSEQHDLVY
                     EETDEAFRVGLNRSRSGAWLMMQCASHTTSETWLLPADTPTGEWRRFAPRLHQREYDL
                     DHQGRRWVMRINDTGRNFRVVAVPVDDWSPEAWEELLPHREQVMVESVDCFATHLVVS
                     ERDAGLPRLRLLDVDGRSRHVPFPESVCDAWLGPNPEYDSGTLRYHYQSLVTPMSVFD
                     YAVASGDTQLLKQTEVLGGYDPSQYESDRRWATAADGTRIPISIVWRRDRSRNRGPLY
                     LTGYGAYGFSYPIVFSSNRLSLLDRGFAVAIAHIRGGSDLGKPWHDGGRMGNKRNTFT
                     DFVAAAEYLVGEGWTSPENLVIEGGSAGGLLMGAVINLRPDLFRVVLAQVPFVDVINT
                     MSDPTLPLTVGEFEEWGNPMVEEQYRWMREYCPYSNLRPGSYPAMLVRTSFNDSQVMY
                     WEPAKYVARLRTFKTDTNPLLLLTNMGAGHGGASGRYDRLREIATDYGFILAVLSGRS
                     SAVD"
     gene            6227..7219
                     /locus_tag="VGA78_08215"
     CDS             6227..7219
                     /locus_tag="VGA78_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893895.1"
                     /translation="MRVSLMLGVGALLGFAPLGQDLVAQRLVKTGRWEAELRWRPRQN
                     AQRVLWIDFDGRYEDRQREGGDFGFTMKVNDLTGLGADNNRWSGPARFEFRRDAGVLR
                     FEGRFEDGLGEGAYRFEANDQFLRESDLAGADEVDDDELLAMLIHDVRREWVTGLQQA
                     GVRRMDADDLLAMRIHNVTPDFVRDLAGLGYRDLSADRLVGLRVHDVSPDYIRQVRKD
                     VDPSADLDDVLSFKIHRVTPEFVREIAQLGYPAPDPDELLSMRIHGVTPSFIRSITAA
                     GIKSIDLDELVAFRIHSIDADFIREAVDAGVRLDPDDMVDYRIHGQRWKRKRDR"
     gene            complement(7230..8390)
                     /locus_tag="VGA78_08220"
     CDS             complement(7230..8390)
                     /locus_tag="VGA78_08220"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9893896.1"
                     /translation="MSSSDVRRRWLLALLLAVSTGWSCAKSSTGIVPAPAAPTPSTSP
                     WKIPVYPTTTWERFSQPEWAGYRSGALDTLTTYLQKIPTTGLMVAVHGRMLYSYGDIT
                     GQSYLASARKSVLSMLFGNYVAQGRIRLTSTLAELGIDDRPALTPEERQATVRDLLVT
                     SSGVFHPASNPGDNLSDAPPRGSQKPGSYFLYSNWDFNALGTIFETATGRRLYDAVEQ
                     DLARPIQMEDWRRDLQQKSGDTTRSIHLAYHMWFSTRDMARLGYLMLREGKWFDRQVI
                     PASWVRESTSPIITSSQMNPPGVRDNQLAYGYLWWILEEQAGSLLAGAYSARGAYGQY
                     ILIAPRLDMVIAHKRVIPRGDNSSVSWSQFLEIARQLVGARCPRGECAITAN"
     gene            complement(8482..>9028)
                     /locus_tag="VGA78_08225"
     CDS             complement(8482..>9028)
                     /locus_tag="VGA78_08225"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9893897.1"
                     /translation="EAVKRAVRAGCTTIEHGGLVDDAALDLMAERGTFFDPNVHLVLQ
                     NYFDHRDRFLGIGNYTAEGFAHMQRLKPVMVEVFRKALARPSLKLVFGTDAVAGSHGR
                     NWEELIFRVESGGQAPMAAIVSATSLAAASLGLQDEIGSVAPGFEADIIAVEGNPARD
                     ITSLRRVKFVMRGGKVFRNTP"
BASE COUNT         1621 a         2986 c         2916 g         1505 t
ORIGIN      
        1 cccagtcacc cccgccgacg gtgaactgtc gcgcggtccg ctcgacgaag accgagtcca
       61 ccttgccggc cacccggttg atgccggcca tggagatcgg ctgtttgccg gcaccattcg
      121 tctgggctgc cgcggacccc gccagcagcg ccgccagacc cagaaccact gaaaagcgtc
      181 gcatgattcc ctgcgtggaa gataccgccc taccgccgtc ccgctctacc gccttactta
      241 ccccccgtga atccgattgc cgacggggcc attctcgccg acctcgagta tctgggggct
      301 ccgggcaaca tcgcaacttg ctttctggag accgacgacg gcctcgccgt ggtcgatccc
      361 ggccccgcca ccacctatga ccgatttcga gaagtcgtgc ggcaactcgg cgccaccctc
      421 gatgacgtcc ggattctgct gctcacgcac attcatctcg atcactccgg cgcggcgggg
      481 tggttggccg aagcacagcc ccggcttcgg gtctacgtcc atgaacgggg cgccccccat
      541 ctggcggacc cgggccgcct gctcaagagc gccacgatga tctacggcga ccgcatgctg
      601 gagctgtggg gtgaggtgaa gccggtgcct cccggggcca tcatccccct gcagggcggc
      661 gaacggctcc agttgggggg gcggtccatc gccagcgcgt acacgcccgg ccatgcctgg
      721 catcacctgg cctggttcga cgaagcttcc ggcatcgcgt tcaccggcga cgtgctgggc
      781 gagcatctgc cgccctccga cgtggccatc ccggtcacgc ccccgccgga cattgacgtc
      841 gagctcatga tcgagagtgg cgaccggatc ctcgaatggc agccggcgcg cctctttccc
      901 acccacttcg ggccggtgaa cgacccaccc cgattcgcgc gagagcacgc aacccgattg
      961 gtgcggtgga gcgaacgggt gcgctcctcc ctggacgacc ccggcactga cgaagaacgg
     1021 gcccagcggg tggccgctct ggggcgtcgc gacctggagg cggtactgcc cgccgagttg
     1081 cattcacgga tcccggagga tgcattgtac ggcaactggt tcggcctggc ccgctactgg
     1141 cgaaagaagg cgtaagggga agttctcatg cgaagcttcc gtctgaccgc ggttgggctg
     1201 atagtctttc cggcactcct ggcgggccag gcccgtccgc cggcccactt ccagaagctg
     1261 gcccacactt acagcatcgt ggcctgggac tccgccaccg gggacctggg cgtcgcggtg
     1321 caatccaagt tccccaacgt gggcggcatc gtaccatggg cccgggctgg ggtgggcgcg
     1381 gtggccactc agagcctcgc caacacggcg tacggcgaag cgggactgga cttgatggcc
     1441 cgaggagcga ccgcgaacga ggcgctgcgc atcatcatgc ggagcgacac catgctcgcc
     1501 gaccgccagg tagggctgat cgatgctatc ggcaacagca ccagctttac cggcgccaac
     1561 accttcgact gggccggtgg ccgtaccggc ggacccaaag gctcgctcgg cggtaagggc
     1621 gatgtcatca cgggtcgcga ctatgccgcg caggccaaca tcatggtgtc ggaccagacg
     1681 gtccggaacc tggccgagag cttcgaacga agccgcggac ccttgggaga tcgcctgatc
     1741 gccgcgctga aggccggcca ggccggcggc ggcgacaagc gaggcatgca gtcggccgcc
     1801 ctgctggtgg tgcggaagga cggcgggtat ctgggcgcca acgaccggtt catcgacatc
     1861 cgggtgtacg acgccgtcga ccccatcgcg gagttggaac ggttatacgc cctccacaag
     1921 ttgcacttct tccccagtga gcccgccgac ctgcttccgc tgacacccgc cctggtcgcg
     1981 cagctcgagc cgattctgct gcgggaaccg caaggccaat cggagaaatg gctgccccga
     2041 ccgcagggga cgccgaacca gacgtttctg gaagcgttga ggaacttcat gtactgggag
     2101 aactacgacg tccgggtccg gatggacggc aagatcgacc gggtggtcct gtccgatatc
     2161 ctggccaaac gacagtgaac agtgaacagt gaacagtgaa cagtgaacag cgtaccggtg
     2221 acggtcattt accgttcact gttttctgcc cccgccgccg tctcgctcga cgcactctgg
     2281 ggcggccggc ccaaggaact ccgggagcag ttgctggagg cgggatcgcc ggaccggaag
     2341 ctcgcctggc ccgccatcgc ggtctcaagc ggattctacg accaggccca ttcatccacg
     2401 acttccaggc cttctccggt ctcaacccgt cggcctacct ggcgcagaag ggcgaacggc
     2461 tgaatcatct ccccgccgac gcctagggac cccgcccggc gtcaattcct tacaataccc
     2521 atcctgttgt tgacctcaga ttgcaggcag cccgagcgag gagaccacaa atggcggtga
     2581 aatacctgcc cgaaggcttc cacacggtca cgccctttct ttcggtggca gacctgccca
     2641 gaccatcgac ttcctcgagc aggccttcgg ggcggaagca accgagctga ccacccggcc
     2701 ggatggcacc ccctggcacg gggaggtccg gatcggcgac tctatggtga tgctgagcca
     2761 ggcgcagggt gagtggaagc ccaaccagag ctcgctctac ctctatgtcc ccgacgccga
     2821 caccacctac cgtcgagccc tcgctgccgg agccacgtct gtgatggagc cgaccgacac
     2881 cttctaccgc aatcgggagt gcggcgtcaa gcatggcggc gggaattact ggtggatcgc
     2941 cacccgcgtg gcggaagtca gccgggagga agtcgagcgg cgggcccggt cagacgtgaa
     3001 gcattgaatc cgcggacgaa gccgattacg ccgatacatc ctccctacac caagactcac
     3061 accgcctaac gaaaccctgt cacaacagct atcatgtgtt tgtggccatc gttggcatcg
     3121 gcatcatctg cggatgacga tcggcaaaga atcggagtgc cacgccggtc agcgcgcccg
     3181 ctcccgatat gcggaccgca gcatcatgat ggaggagtag gtcactacca ccactaccag
     3241 ccaccgcacc atggtgagcg gcagggattt gacgatgaag gcggcgatca acaccgccgg
     3301 aatcccgccc agcaccagcc ccagcgccgg tctgacgcta tagctcctgg cctccaggaa
     3361 cttgacgctc gctaccggca tgaggaaggc gcacgaaccc atcatgatgg gaaaggccgc
     3421 ctggggattc atccccagca ggctcaccag gatcatgcac ggggcgtaca gtccgatgcc
     3481 gatcgtcatg agcgaaccca gcaggaagtt tccggccatc ccgacgccga gccgggtcga
     3541 tgacagcgcc agagcgtcgc ccccgccggg aaagatcttc aagttgttca tcgtgaagag
     3601 ggtggcggcc gcgagcaggg cgacgcccat cccgatctgc acgttccgcc tgggccagcg
     3661 cgacacgatg ccggccccca gataggcccc cgccaccgct gtgccgatca tcagcgccag
     3721 cgtgatccca tccacttcaa ccagggtcat gaagatgaag gcctgggtga tcgtggccag
     3781 cgtgtggccc accgagagcg tccccggaat ccgttcgtcc ggcaccatac cgcgcagttt
     3841 gaagatcgcg gtggtcggcg cgtaggaccc gatcccgagc gtgtcgaaga agttggtgcc
     3901 gaatcccacg atcagctgga acaaggtggg aggtgcgggg gcctcatcgg cgctccggga
     3961 accgaccccg gagcgaagat gccgtaccca gaccagcaca aatcccaggg tgacgacccc
     4021 gagggccgcg agcagcagag tcttgaccgt catggaacct ggagaggggc gaagccggga
     4081 atctaatcga ccgccgagga ccgaccactg aggacggcga gaatgaaccc gtagtcggtt
     4141 gcgatctcgc gcaaccggtc gtaccggccg gatgccccac cgtgccccgc acccatgttg
     4201 gtaaggagca gcagaggatt ggtgtcggtc ttgaaggtcc gaagccgggc cacgtacttc
     4261 gccggctccc agtacatgac ctggctgtcg ttgaacgaag tccggaccag catggcgggg
     4321 taactgccgg gcctgaggtt ggaatagggg cagtactccc gcatccagcg gtactgctcc
     4381 tcgaccatgg ggtttcccca ctcctcgaat tcgccgaccg tcagcggcag cgtcgggtcg
     4441 gacatggtgt tgatcacgtc cacgaagggc acctgtgcca gcaccacccg gaagaggtcg
     4501 ggccgcaggt tgatgaccgc acccatcaac aggccgcccg cgctgccgcc ttcgatcacc
     4561 agattctccg gactggtcca gccttcgccc accagatact cggcggccgc cacgaagtca
     4621 gtgaacgtgt tccgcttgtt gcccatgcgg ccgccgtcgt gccagggctt gcccaggtcg
     4681 ctcccgcccc gaatgtgggc gatcgccacc gcgaaccccc ggtccagcag gctcagccgg
     4741 ttggaggaaa acacgatcgg ataggagaag ccgtacgcgc cgtaccccgt gagataaagc
     4801 ggaccccggt tccgggaacg gtcccggcgc cacacgatgg agatcgggat tcgggtcccg
     4861 tctgccgcgg tggcccagcg ccgatcgctc tcgtactgcg atggatcgta gccgcccagc
     4921 acttcggtct gtttgagcag ctgggtatca cccgaggcga cggcatagtc gaacaccgac
     4981 atcggggtca ccagcgactg gtagtggtag cgcagagtcc cgctgtcgta ctcggggttg
     5041 ggccccagcc aggcgtcgca caccgactcg ggaaatggca cgtgccggct ccgcccgtcg
     5101 acatcgagca gccgaagccg gggcaacccg gcatcgcgct cgctgaccac cagatgggtc
     5161 gcgaagcaat ccaccgactc gaccatgacc tgttcccgat gcggcaacag ctcttcccag
     5221 gcttcgggag accagtcgtc gaccggcact gccaccaccc ggaagttccg gccggtgtcg
     5281 ttgatccgca tgacccagcg tcggccctgg tgatccagat cgtattcccg ctggtgcaac
     5341 cggggagcaa accggcgcca ttcgccggtc ggtgtgtcgg cgggcagcag ccaggtctcg
     5401 ctggtggtgt gactggcgca ttgcatcatc agccaggcac cgctgcggct gcgattcagt
     5461 ccgacccgga aggcttcgtc ggtctcctcg tacaccagat cgtgctgctc gctgcccagt
     5521 cggtggcgcc agagacgaga gggtcgcttg gcgtcgtcct cggtgacgta gaacagccat
     5581 gctccatcgg gggtccaggc cgcgctgctg gatcgctcga tgcggagcgg gagcttcgct
     5641 ccggtgacca ggtctttcac ctcgagcacg tagtcgcgaa agccggtctc gtcggtggag
     5701 taggccagca gcttcccatc atcggttaca tcgaattcgc ccaacgccat gaacggcttg
     5761 cccagggcca gctggttgag gtcgagcagt acctcttcgg acgcctcgag cgagccccgc
     5821 ttgcgacagt ggatggggta ctgctcgcct tcctcggttc tggtgtagta gaaaaagcca
     5881 cggtcgagga aaggcacagt caggtcggtc tgcttgatcc gaccgagcat ctcgcggtag
     5941 agcccctcgc acacctcctt ctcgggcgcg agcatcgact cggcgtaggt gttttccgct
     6001 tcgaggtagg cccggacagc cgggtctccc cgatcccgca tccagaaata gggatcatcc
     6061 agccgctccc cgaaccgggt aacggagtaa gcccggcgct cggcgacggg cgggacctgg
     6121 gctggggaga gaacggatgc catgggaccg gggaatctac cgaccccctt gcaacgctgg
     6181 gcagcccaac ctgatctaaa cagttatctc gttgtcagag gccaacatgc gagtctcact
     6241 catgctcggg gtaggagccc tgctcgggtt cgccccactg ggccaggact tggtcgccca
     6301 gcggctcgtc aagactggtc gttgggaagc cgagctgcgc tggcgccccc gccagaatgc
     6361 ccagcgggtg ctctggatcg atttcgatgg tcgctacgag gaccgacagc gggagggggg
     6421 cgatttcgga ttcacgatga aggtgaatga cttgactggg ctcggggccg acaacaaccg
     6481 gtggtccgga ccggcccggt tcgagttcag gcgcgatgcc ggtgtcctgc gattcgaggg
     6541 ccggttcgag gatgggttgg gcgagggcgc ctaccgcttc gaggccaacg atcagttcct
     6601 gcgagagtcg gacttggccg gggcggatga ggttgacgac gacgagctgc tcgccatgtt
     6661 gatccacgat gtgcgccggg agtgggtcac cgggctccag caggccgggg tccggcggat
     6721 ggacgcggac gacctgctgg ccatgcggat tcacaacgtc accccggact tcgtccgcga
     6781 cctggccggg ctcggctatc gcgacctttc agccgaccgg ctggttggtc tccgggtcca
     6841 cgacgtttcg cccgactaca tccgccaggt gcggaaagac gtcgacccgt ccgccgacct
     6901 ggatgacgtc ctgtccttca agatccaccg ggtgaccccc gagttcgttc gggaaatcgc
     6961 ccagttggga tacccggccc ccgatccgga cgagctgttg tcgatgcgga tccacggcgt
     7021 gacgcccagc ttcatccggt cgatcacggc ggctggaatc aagtcgattg atctggatga
     7081 gctggtggcg ttccggatcc acagcatcga tgccgatttc atcagggagg cggtggacgc
     7141 aggcgtccgg ctcgatccgg atgacatggt ggactaccgg attcacgggc agcggtggaa
     7201 gcggaaacgg gatcggtagt cgtccctcct cagttggcgg taatcgcgca ctctccgcgg
     7261 gggcaacgcg cccccaccag ctggcgcgcg atctcgagaa actggctcca gctcactgag
     7321 gagttgtcgc cccgagggat cacccgcttg tgggcgatca ccatgtccag ccggggtgcg
     7381 atcaggatgt attgcccgta ggccccgcgc gcgctgtaag cgcccgcgag cagacttccc
     7441 gcctgctcct ccagaatcca ccacagatag ccataggcca gctgattgtc ccgcaccccg
     7501 ggcgggttca tctggctgga ggtgatgatg ggcgacgtgc tttcgcggac ccatgacgcc
     7561 gggatgacct ggcggtcgaa ccacttgcct tcccgcagca tgaggtaacc cagtcgggcc
     7621 atgtcgcggg tcgagaacca catgtggtag gccagatgaa tggagcgggt cgtgtcaccg
     7681 ctcttctgct gcagatcgcg ccgccagtcc tccatctgaa tcggccgggc cagatcctgt
     7741 tccacggcgt cgtacaggcg gcggccggtg gcggtctcga agatggtccc aagcgcgttg
     7801 aaatcccagt tgctgtacag gaagtaggat cccggtttct gggagccgcg ggggggcgca
     7861 tcgctcaggt tgtcgccggg attggaggcg gggtgaaaga cgcccgaact ggtgaccagc
     7921 aggtcgcgaa ctgtggcctg gcgctcctcc ggagtaaggg ccggccggtc gtcgatcccc
     7981 agctcggcca gcgtggaggt gagcctgatt cggccctgcg ccacatagtt cccgaacagc
     8041 atcgacagca cgctcttccg ggccgacgcg aggtaactct gcccggtgat gtcaccgtag
     8101 ctgtagagca tccggccatg gaccgcgacc atcaggcccg tggttgggat cttctggagg
     8161 tatgtcgtca gcgtgtcgag cgcacccgac cggtaaccgg cccactccgg ctgggagaac
     8221 cgctcccagg ttgtggtggg atagaccggg atcttccagg gcgaggtcga cggtgtgggg
     8281 gctgccgggg ccgggacgat cccggtgctg gatttggcgc atgaccaacc ggtggaaacc
     8341 gccaggagca gcgccagcaa ccagcgccgc cgtacgtctg aagacgacat ggggcacctc
     8401 cctcccgact caacataccg ccccgcgcgg tcccgtccac ccggcgggat ggcccctcgg
     8461 aacggaccga cagtcccggg gtcatggggt gttccggaaa accttgccgc cccgcatgac
     8521 aaacttcacc cggcgtaacg aggtgatgtc ccgggccggg ttcccttcca ccgcgatgat
     8581 atcggcttcg aatccggggg cgacgctgcc gatctcgtcc tgcagtccca gcgacgccgc
     8641 ggcgagggac gtggccgaga caatggctgc catcggagcc tggccgccgc tttcgactcg
     8701 gaagatcagc tcttcccaat tccgtccgtg cgatcccgcg acggcgtcgg ttccgaagac
     8761 cagcttgagc gacgggcgag ccagcgcctt gcgaaacact tccaccatga ctggcttgag
     8821 ccgctgcata tgcgcgaacc cctcggcggt gtaattgccg attccgagaa accggtcccg
     8881 atggtcgaag tagttctgca gcaccaggtg tacgttggga tcgaagaagg tgccccgttc
     8941 ggccatcaga tccagtgccg cgtcgtccac caggccacca tgctcgatcg tggtgcaacc
     9001 ggcgcggacg gcccgcttga ccgcctcg
//
LOCUS       DASWKS010000287         9892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1638249, whole genome shotgun sequence.
ACCESSION   DASWKS010000287 DASWKS010000000
VERSION     DASWKS010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638249"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            461..928
                     /locus_tag="VGA78_08230"
     CDS             461..928
                     /locus_tag="VGA78_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893898.1"
                     /translation="MNSSAADGLPGISTDGLALYFSSRCEGGSGGMGLWVARRNTRNE
                     SFSRAETLGFGVNSASDDWGPGISSDGLQLYVMSNRPGGHGREDLWVTTRASTSATFG
                     SPRNLGPLVNSATLDGRPNLSADGTTLFFMSDRPGGSGQIDLWQASTRAHRRR"
     gene            953..1111
                     /locus_tag="VGA78_08235"
     CDS             953..1111
                     /locus_tag="VGA78_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893899.1"
                     /translation="MPFKSRAQRRKFAELLVQGEISPETYEEWNRGPAQKKGSWPTVG
                     NTTDRLTD"
     gene            1138..1320
                     /locus_tag="VGA78_08240"
     CDS             1138..1320
                     /locus_tag="VGA78_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893900.1"
                     /translation="MKTYVMTTGAIFGLLTLAHIWRVIEETHLATDPGYLLITVTAAA
                     LCLWAGRLLWLARGGR"
     gene            1340..1666
                     /locus_tag="VGA78_08245"
     CDS             1340..1666
                     /locus_tag="VGA78_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893901.1"
                     /translation="MPARLLTERIDEHVREWDITVETTLETASSFLAFGTRGHRAVVL
                     KVVRAPGDEWQAGEILEIDVDRALQWSFAQAVLSAIWSREDGAAVGPRHAGLLLAHAI
                     QTLVGP"
     gene            1865..2596
                     /locus_tag="VGA78_08250"
     CDS             1865..2596
                     /locus_tag="VGA78_08250"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX9893902.1"
                     /translation="MNQAEEFLEAVRRGDGREVSALLDVSPELVRLAGEHGKTGLHWA
                     AEADGIDVARTLVDAGADIEARTSWGASPLDWAATMGSTRVAAFLLSRGAGGLTLITA
                     AALGMQPEVEAVVESGRDFSPHRRRDAPRTPNDHWPTDSAHLLGDILSDALYAAARNG
                     HTPVVEYLLSRGASIDAKGVFGATGLHWAAMNGHAGTVELLISRGANLELKDARFGAT
                     ALGWAEEGGHTHIADLLRRSGRTAR"
     gene            2722..4269
                     /locus_tag="VGA78_08255"
     CDS             2722..4269
                     /locus_tag="VGA78_08255"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX9893903.1"
                     /translation="MKPRLLAAPALLLAGALVAGPLSVPSKAQVTTKRTQPGFNLFTV
                     EQDIELGRQSAAEAERRLTLLSNRNVDNYLNRIVQRLAAGAPGARYPYQIKAVNAAEI
                     NAFALPGGPMYVNRGLIETARTEAELAGVLAHEMSHVALRHGTHQASKVYLTRSGLGI
                     LGGLIGKPSSSASRIVNTIGGVGLNAVFLKFSRDDEYEADKVGAEIMAQAGYDPRAMA
                     SFLELLRAEQGRNPGKLETFFSSHPPAADRETRIRQRAATLGSGRTQVVGGFETMRSR
                     LRRLPSPSSQPLTISNDPAQQVEVTTGQLAVRVDPPSSRFEQLVHPSGFFTIDHPENW
                     QTYPSGLAVSMAPEGGVVNRSDGQQVMLYGVIINHYAPFEGEDARRSRSLQRSYAPFE
                     DRRAPRGTLEDATDDLVRTILSTNPYLRAETNLAQPEVIDGAPGFSMVLSGRSPVTGD
                     EERVTLYTRGLPDGHVIYARGIVPGGHADGFDQVFTRMVQTLSVNDEAAHRGRTISRT
                     NLRPPAR"
     gene            4387..4881
                     /locus_tag="VGA78_08260"
     CDS             4387..4881
                     /locus_tag="VGA78_08260"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX9893904.1"
                     /translation="MPRKNPSPAVLNHSADPIDREALVALLNQDLAREYQAIIAYVVY
                     SQVLKGAAFMAIAQELETHAAEELQHALVIAQQIDYLGGTPAVVPKPVKLSSDPKALL
                     RFDLQNETETIRQYRDRVAQCEALGESGLPRPTLPPPSLERHFRGPKLQGTCRSRAAP
                     SRGV"
     gene            4886..5284
                     /locus_tag="VGA78_08265"
     CDS             4886..5284
                     /locus_tag="VGA78_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893905.1"
                     /translation="MLKSPVVWIAAIWVGVMIHLDWHLGRPPTGLSYHWLLAILAFMP
                     LTWVAGRRWPEAPSRAATWMILLGLLLGQGIVPVGEVLLYDEGWDPFTNPLRWSIFTQ
                     FLSAGFLTHLISQLLFGRWLGRGMATSSKT"
     gene            5358..5489
                     /locus_tag="VGA78_08270"
     CDS             5358..5489
                     /locus_tag="VGA78_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893906.1"
                     /translation="MRLIILHSASDNASPVAGGGAVVGQAGAAEVIVVLVGGPAPAA"
     gene            5565..5834
                     /locus_tag="VGA78_08275"
     CDS             5565..5834
                     /locus_tag="VGA78_08275"
                     /inference="COORDINATES: protein motif:HMM:NF023134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HEX9893907.1"
                     /translation="MSRWRGAAGAPVRRDITLERAGPALLRLRIGEAAAALLTSEAMG
                     RVKACPACGWFFRDASKNRSRRWCSMATCGASAKARRYYWKTRAR"
     gene            5874..6233
                     /locus_tag="VGA78_08280"
     CDS             5874..6233
                     /locus_tag="VGA78_08280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893908.1"
                     /translation="MIPLFAVLLFQDPAIVGTWKLTDEKIKTNGPREVVIRNDSSASW
                     GREHSRWRILPGSQIKIAVGGEWETYKFKVKGNKLTISGGDLTDPITLTKTGPATPRP
                     TGVPVPPDPDQAPPAHP"
     gene            complement(6568..7401)
                     /locus_tag="VGA78_08285"
     CDS             complement(6568..7401)
                     /locus_tag="VGA78_08285"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9893909.1"
                     /translation="MIRLFVLGSGSKGNAFAVETAGGVLLVDAGFGPKALQRRAERVG
                     LDLGRTVAMIVTHEHGDHAESGVALARRMKVPLLCSNGTWSALGAPAAISFIPLRHAR
                     PLVIGSFTVHCSLTTHDAREPLAVAVETAGGVRLAFATDIGRSSSSVRYLMQRAHAIV
                     VESNYDELMLRTGRYPPSVQQRIAGSNGHLSNRAAADLVASVMHQGLSVVVLAHLSQQ
                     CNDPGQARQTVEPLLRARGFAGRVLVALQDEPLPAIPVARSAPPAQVELALGWGPADR
                     T"
     gene            complement(7398..8585)
                     /locus_tag="VGA78_08290"
     CDS             complement(7398..8585)
                     /locus_tag="VGA78_08290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sugar nucleotidyl transferase"
                     /protein_id="HEX9893910.1"
                     /translation="MRALYLVEPFASAAWAPFTGVRPVAELRAGAWLIRERWEAAVGA
                     HTQAVLSPHLAGFVDTEGPPVVVPDGIVGPAVIARSHVVPPRSVLDFVRSGPEGPQPV
                     RRLTSHGVTIAWRLEPDEPWRGPDDQGEAMEVDALVLEGTWQLVDALERLLPTDCLEF
                     TAAPADPVPAGCIVLGDASLVVCLDAQVEPGVVFDTRQGAVVLTEGVEVRSGTRLEGP
                     LFAGRHTRFLGGQIRHSSFGPECRVQGEMATTVMVGYSNKSHDGFIGHSVIGQWVNVG
                     AGTITSNLKNTYGPVRIETPTGRVETGRTFLGSLIADHAKIGIGTMLGTGTIVGAAAH
                     VLGNPVPRHIPPFSWKTPGGGERLDADGFIRIATRVMPRRGIDLTPEREQWLRALHAR
                     QGR"
     gene            complement(8582..9610)
                     /locus_tag="VGA78_08295"
     CDS             complement(8582..9610)
                     /locus_tag="VGA78_08295"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX9893911.1"
                     /translation="MDWVVILAGGSGTRFWPLSSPRHPKQLLPLAGPTPSAVAAVAAV
                     EPLVTRRRILMVTGPDLAEPLRQATGLPADQVLVEPVAASTAPALAWGTTTALARDPS
                     ATILSMHADWHLGDPDGFRRTADAALFAARQHDALITVGITPTRTETGYGYIVPGEPV
                     DGAVRQVTRFREKPDRATAEALIASGALWNSGLFAWTASRFLAEVRQHTPELAGSLVF
                     LAEGDVSRFFESVTPVSVDIGLLERSNRVLTIAGDFGWDDVGAWDALARLKPADRDGN
                     VLQGPVYTHESGGCIAWSDGTPIVLSGVRDLIVVHANGRVLVLDRSRGPDLKRTLDVL
                     PPEVRDLP"
     gene            complement(9622..>9892)
                     /locus_tag="VGA78_08300"
     CDS             complement(9622..>9892)
                     /locus_tag="VGA78_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893912.1"
                     /translation="LIDHLLPPGTDGDALAALAATVIRQVTELGSAARLGDPSTAILE
                     FAGGPAILGMVDGGAALVVMARPDVDLGELLYLVRRHRPAVADAL"
BASE COUNT         1690 a         3322 c         3302 g         1578 t
ORIGIN      
        1 agggcggtct gggccgctcc gtcaggctga accgtcatgg ggattcgcgg gcgtggatgt
       61 cggcggaagt gtaaccccgg acagcagtgc cgtccaatgc gaaggtgagt gccttccccg
      121 taggcgccct gattatcatc cgtctctact tcctcctaga cgctcatgcg cccgaggctc
      181 ctcctcatag cggcattcgc tatcccgatc gatcccatgc cggcgcaggt acgctccgaa
      241 ttcggcgtca cgatcttcgg cctccccacc aacctcggtc cagtcgtcaa cagctcggct
      301 ttcgacggcg ggccgagcat ctcccgggat gggctgtcgc tgtatttcac ctccgaacgc
      361 cccggcggat cgggcgccgg ggacctctgg gtgacgaggc gggcgacggc cactggctcc
      421 ttcggggccc ttcggacctc cccggcacct cggcccgggt gtgaacagca gcgctgccga
      481 cgggttgccc ggtatctcga ccgacgggtt ggcgctctat ttttcctctc ggtgcgaggg
      541 cggatcgggt gggatgggcc tttgggtcgc gcggcgaaac accaggaacg aatcgttctc
      601 ccgggcggaa actctgggat ttggcgtcaa cagcgcctcc gacgactggg gccccggtat
      661 ctcgagcgac gggctccagc tctatgtcat gtccaatcgg cccggcgggc atggccggga
      721 ggacctttgg gtgacgaccc gagccagcac ctccgcaacg tttggctcgc cccggaatct
      781 gggtccgctg gtgaatagcg ccacgctcga tgggaggccg aatctctccg ccgacggcac
      841 gacattgttc ttcatgtccg accgaccggg gggatcaggc cagatcgatc tctggcaggc
      901 gagcaccagg gcccacaggc gacgctgatt cttggcgtca ggagtccacg cgatgccttt
      961 caagagccga gcccaacgcc ggaaattcgc cgaactgctg gtccagggcg agatctcgcc
     1021 ggagacctac gaagagtgga accgcgggcc ggctcaaaaa aaaggaagtt ggccgacggt
     1081 cggaaacacc actgaccgac tgaccgactg accgactgac tgaatcgcga ggcgctcttg
     1141 aaaacctatg tcatgaccac gggcgcgatc ttcggcctgc tcaccttggc ccatatctgg
     1201 cgcgtgatcg aagagacaca cctcgcgacc gacccggggt atctgctcat caccgtgacc
     1261 gcagccgctc tttgcctctg ggccggccgc ctgctttggc ttgcgcgggg cggccggtag
     1321 ccctaagcgc tcgcccccag tgcctgctcg actgctgacc gagcgcatcg acgagcacgt
     1381 ccgggagtgg gacatcaccg tcgagacgac gctggaaacg gccagctcct tcctggcctt
     1441 cggcacccgc ggacatcggg cggtggtcct caaggtggtc cgcgcgcccg gggatgagtg
     1501 gcaggcgggc gagatcctcg agattgacgt cgatcgcgcg ctgcagtggt catttgccca
     1561 agcggtgctc tcggcgatct ggtcgagaga ggatggagcc gccgtgggcc cgaggcatgc
     1621 cggcttgctg ctggcccatg cgatccagac gctggtgggg ccatgaccgg tgaagggagc
     1681 cgtgccatcc tcgaagggcc ccataccctg tcgatttcgg caaccccgtt cgtcgagtag
     1741 ataggacggg gttttctggc gcgttcggat gccttggggc aatcgagagc caagcccaac
     1801 accgagtgga ggacacaaca atggcttccc acacgtttcg tgtcagcgca ggaatcgggg
     1861 aggaatgaac caggccgaag agtttctgga ggcggttcgc cggggtgacg gtagggaagt
     1921 atccgcgctg ctcgacgtca gcccggaact ggtccgcctg gcaggggaac acggcaagac
     1981 cgggctgcat tgggcggcgg aggcggacgg catcgacgtt gcccgtaccc tggtagatgc
     2041 cggtgcggac atcgaggcga ggacgtcgtg gggagcctcg ccgctcgact gggcggccac
     2101 gatgggcagc acccgggtcg cggcgtttct cctgtctcgc ggcgcgggtg gcttgaccct
     2161 gatcaccgcg gctgcgttgg ggatgcaacc cgaggtcgag gcggtcgtcg agtccggccg
     2221 ggacttctca cctcatcgca gaagagatgc tccccgcacg cccaacgacc actggccgac
     2281 tgattcggcc cacctgctgg gtgacatcct ttcggacgct ctgtatgcgg ctgcccgcaa
     2341 cggtcacacc cccgtggtgg agtacctgct ctcccgcggt gcgagtatcg acgccaaggg
     2401 tgtctttgga gcgaccgggc tccattgggc ggcgatgaac gggcatgccg gtaccgtgga
     2461 gctgctcatc tcccggggtg cgaatctcga gctcaaggac gcacgcttcg gcgccacggc
     2521 tctgggatgg gcggaagaag gaggtcatac ccacatcgct gacctcctcc ggcgaagcgg
     2581 gcgaaccgcc cggtagggac tgcgcagcat gagggcgagc atacgtgagc gagaccgcat
     2641 cacaaccctg tgtcccaatt cctcttacag ggcgtttcca aagaaggagg taaagaagaa
     2701 cgagagccat aggagacgag catgaaacca agactgctgg cagcgcctgc tctcctgctc
     2761 gcaggcgccc tcgtcgccgg gccgctcagt gtcccgagca aggcccaggt aaccaccaaa
     2821 cgcacccaac ccggcttcaa cctctttacg gtcgagcagg acatcgagtt gggccgccag
     2881 tccgcggccg aggcggagcg gcggctgacg ctgttgagca accgaaacgt agacaactac
     2941 ctcaaccgga tcgtgcagcg gctggccgcc ggcgcaccgg gcgcccgtta tccctaccag
     3001 atcaaggccg tgaacgccgc tgaaatcaac gccttcgcgc ttcccggcgg cccgatgtac
     3061 gtcaatcgcg ggctgatcga gacggcacga accgaagcgg agctggccgg cgtgctggcc
     3121 catgagatgt ctcacgtggc gctgcgccat ggaacccatc aggcctccaa ggtgtatctc
     3181 acccggtcgg gcctgggaat tctgggcggc ctgatcggaa agccctcgag tagtgcgtcc
     3241 cggatcgtca acaccatcgg gggcgtcggc ctgaacgcgg tcttcctcaa gttcagccgc
     3301 gacgatgaat acgaagcgga caaggtaggc gcagagatca tggcccaggc cggatacgat
     3361 ccgagggcca tggcgagttt cctcgagttg ctccgggccg agcaaggccg caatcccggc
     3421 aagctggaga ccttcttcag cagccacccg cccgcggccg accgggaaac ccgcatccgc
     3481 cagcgtgcgg ccacgctggg atcgggacga acccaggtcg tcggcgggtt cgagaccatg
     3541 cggagcagac tgcggcgact gccgagccca tcctcccagc cgctgacgat atcgaacgat
     3601 ccggctcagc aggtggaggt gaccaccggt cagttggcgg tgcgggtgga cccgccatct
     3661 tcccgcttcg agcagttggt gcatcccagc ggcttcttca ccatcgacca ccccgagaac
     3721 tggcagacct atccttccgg cctggccgtc tccatggccc ccgagggggg tgtggtcaac
     3781 cggagcgacg gccagcaggt catgctctat ggggtcatca tcaaccatta cgcgccgttc
     3841 gagggtgagg atgccaggcg cagccggagc ctgcagcgca gctacgcgcc gttcgaggac
     3901 cgcagagccc cgcgcgggac gctggaggac gccacggatg acctggttcg caccatcctc
     3961 agcaccaatc cgtacctgcg ggccgagacc aacctggcgc aaccggaggt gatcgatggc
     4021 gcgcccgggt tctcgatggt gctctcgggc cgttcgccgg tgacgggaga tgaagaacgg
     4081 gtgaccctgt acacccgggg cctgcccgat ggtcacgtca tctacgcccg gggcatcgtg
     4141 ccgggcggcc atgcggacgg gttcgatcag gttttcacgc gaatggtcca gaccttgagc
     4201 gtcaacgatg aggccgccca tcgcgggcgc accatttcgc gcaccaacct gcggccgccg
     4261 gcgcggtaga ggtcgatagc acggtggagg gtcgcgggga cccgcggccc ttcgcacccc
     4321 atttcacagg ctacccaacg cgccgtccga ggctcgcctt gtctcgagtc ggcgcgagga
     4381 ggtttcgtgc cccgaaagaa tccatcccct gccgtcctga accattcggc cgatccgatc
     4441 gaccgggagg cgctcgtggc gctgctcaac caggacctgg cccgggagta ccaggccatc
     4501 attgcatacg tggtgtactc gcaggtgctc aagggcgccg ccttcatggc catcgcccag
     4561 gaactggaga cccatgcggc cgaggagctg cagcacgcgc tcgttatcgc ccagcagata
     4621 gactacctgg ggggaacccc ggccgtggtc ccgaaaccgg tcaagctgtc gagcgatccc
     4681 aaggcactgc tccggttcga tctgcagaac gagaccgaga cgattcggca ataccgcgac
     4741 cgggtcgcgc aatgcgaggc gctgggtgag tcaggcctcc cgcgcccgac ccttccgccg
     4801 ccatcgctcg aacgtcactt tagggggcca aagctgcaag gcacctgtcg cagccgcgca
     4861 gcaccctcgc gaggagtttg atctgatgct caaatcaccg gtggtttgga tcgcggcgat
     4921 ctgggtcggc gtgatgatcc atctggactg gcacctcggg cggccgccga ccggcctctc
     4981 ctaccactgg ctgctcgcga tcctggcctt catgccgctc acctgggtcg cgggccggcg
     5041 atggccggaa gcaccctccc gggcggcgac ctggatgatc ctcctcggcc tgttgctggg
     5101 acagggtatc gtgccggtgg gcgaggtgct tctctacgac gaggggtggg acccgttcac
     5161 caatccgttg cgctggtcga tcttcactca gttcctgagc gcgggctttc tgacgcacct
     5221 catcagccag ctgctgttcg gacggtggct gggacgcggg atggcgacct cgagcaaaac
     5281 ctgaccagcc tcagtccact gccgccagta actcgcttga tcgcctcgat cgaatcccac
     5341 aaggtcgtga gcgtgacatg cgcctgatca tcctccactc ggcgtcggac aatgcctccc
     5401 cggttgccgg gggtggagcg gtagtcggcc aggccggtgc ggcggaggta atcgtagtcc
     5461 tggttggagg acctgctcca gcagcctgac cagccgttcg gcgcacgtca ggccgggatc
     5521 gagcaggggg tcatagatcg tgagctccag ccccatggcc cggcgtgagc cggtggcggg
     5581 gcgctgccgg cgctccagtc cggcgggaca tcaccctcga gcgggcgggg ccggcgttgt
     5641 tgcggctgcg gattggggaa gcagcggcgg cgctgctgac ctcggaagcc atggggcggg
     5701 tcaaggcctg tccggcctgt ggctggttct ttcgagacgc cagtaagaac cggtcgcgcc
     5761 gctggtgcag catggcgacc tgcggggcga gcgcgaaggc ccggcggtac tactggaaga
     5821 ccagggcacg ataaccgtta cattaccgcc gacgctctga ccccggttcc gacatgattc
     5881 cgctgtttgc cgtactgttg tttcaggatc ccgcgatcgt gggcacctgg aagctcaccg
     5941 atgaaaagat caagaccaac ggaccccgcg aagtggtgat ccgcaacgac tcgagcgcca
     6001 gctgggggcg ggaacactcg cgctggcgga tcctgcccgg gagtcagatc aagatcgcgg
     6061 tggggggcga gtgggagacc tacaagttca aagtgaaggg caacaagctc acgatctccg
     6121 gtggcgacct gaccgacccg atcacgctga ccaagaccgg accggccacg ccccgtccca
     6181 ccggggttcc ggttcctccc gatcccgatc aggcgccgcc ggcgcacccc tgagtccggc
     6241 tgcttcccgg agggaaaaac ctaacagaca gccaaacggc atccacagat tacacggatt
     6301 acgcggattt cccggatacc gtaactcatc aaccttcctt taccacccaa aaaagctgct
     6361 gttgtttgta gtttgaaatc tgtgtaatcc gcgtaatctg cggagggcct ttccgcgctt
     6421 cacggaagga cacctaacaa acagctaaaa ggcatccaca gattacgcgg attccacgga
     6481 ttctgtgact cgccaaccac atccgtggat gcctcttgct gtgatcttgt ggtagccagg
     6541 tcggtcgagg tgaatcggtc ggttgactta ggtgcggtcg gccgggcccc accccagcgc
     6601 cagctcgacc tgcgccggcg gagctgaccg ggctaccggg atcgccggga gcggctcgtc
     6661 ctgcagggcg accaggactc tgcccgcgaa cccgcgcgct ctcagcaacg gctcgaccgt
     6721 ctgccgagcc tgtcccggat cgttgcattg ctggctcagg tgcgccagga ccaccacgct
     6781 caggccctgg tgcatcacgc tcgccaccag gtcggcggct gcgcggttgg agaggtgccc
     6841 gttggaaccc gcgatccgct gctggaccga cggcgggtac cggccggtcc ggagcatcag
     6901 ctcgtcgtag ttgctttcca ctacgatcgc gtgggcccgc tgcatcaggt aacgcacgct
     6961 gctgctggag cggccgatat cggtggcgaa agcgagccgg accccgcctg ccgtttcgac
     7021 cgcgaccgcc aggggctcgc gcgcgtcgtg ggtggtcagc gaacagtgca ccgtgaacga
     7081 tccgatcacg aggggacggg cgtggcggag aggaataaac gagatggccg ccggcgcacc
     7141 cagggcgctc cacgtgccgt tggagcagag cagtggcacc ttcatgcgcc gggccagggc
     7201 gacgccgctt tccgcgtggt cgccgtgctc gtgggtcacg atcatggcca cggtccgccc
     7261 caggtcgagg ccgacccgct ccgcgcgccg ctggagcgcc ttggggccga agccggcatc
     7321 caccagaagc acgcccccgg cggtttccac cgcgaaggcg ttgcccttgg agccggagcc
     7381 gagcacgaag aggcggatca tcggccctgc cgggcatgga gcgcgcgcaa ccactgctcc
     7441 cgttcggggg tcaggtcgat accgcggcgc ggcatcaccc gggttgcgat ccggataaac
     7501 ccatcggcat cgagccgctc gccgccgccc ggcgtcttcc agctgaacgg cggaatgtgc
     7561 cgcggcaccg gattgcccag cacgtgggcg gccgcaccca cgatggtccc ggtgccgagc
     7621 atggtgccga tcccgatctt ggcgtggtcg gcgatgaggc tgccgaggaa ggtccggccg
     7681 gtctcgaccc ggccggtcgg ggtctcgatc cgcaccggtc cgtacgtgtt cttgaggttc
     7741 gacgtaatgg tgccggcgcc cacgttcacc cactggccga tcaccgagtg accgatgaac
     7801 ccatcgtgac tcttgttgga gtagcccacc atgaccgtcg tcgccatctc accctgtacc
     7861 cggcattcgg gtccgaagct cgagtgccgg atctgacctc ccagaaagcg ggtgtgccgc
     7921 cccgcaaaga gcggcccttc cagccgggtt ccggagcgga cttccacgcc ttcggtaagt
     7981 acgaccgcac cctgacgggt gtcgaacacc acgccgggtt cgacctgggc gtcgagacac
     8041 accaccagcg aggcatctcc caggacgatg cagcccgcgg gcaccgggtc ggcgggagcg
     8101 gcggtgaact ccaggcagtc ggtcggcagc agtcgttcca gcgcatccac cagttgccag
     8161 gtcccttcca gcaccaacgc gtccacttcc atcgcctcac cctggtcgtc cgggccccgc
     8221 catggttcat cgggttccag tcgccacgcg atggtgactc catgtgacgt gagccggcgt
     8281 accggctggg gtccctccgg tccggatcgc acgaagtcga gcacgctccg gggcggcacc
     8341 acgtgggagc gcgcaatcac cgccggaccc acgatgccgt ccgggaccac caccggcggg
     8401 ccttcggtgt cgacgaagcc ggccagatgg ggagacagga ccgcctgggt gtgggccccg
     8461 accgcggcct cccaccgctc ccggatcagc caggcgccgg cacggagctc ggcgaccggc
     8521 cgcacgccgg tgaagggcgc ccacgccgcc gaagcgaacg gctccaccag ataaagagcc
     8581 ctcatggcag gtcgcgcacc tcgggtggaa ggacatcgag cgttcgcttg aggtcgggcc
     8641 cacggctccg gtcgaggacc aggacccggc cgttggcgtg caccacgatc aaatcgcgca
     8701 cgccgctcag cacgatgggg gtgccgtccg accaggcgat gcagccaccg ctctcatggg
     8761 tgtagaccgg cccctgcagc acgttgccgt cccggtccgc cggtttcaat cgggccagcg
     8821 cgtcccacgc acccacatcg tcccacccga agtcgcccgc gatcgtcagc acccggttgc
     8881 tccgctccag cagcccgatg tccaccgaga ccggcgtcac ggactcgaag aagcgggaca
     8941 cgtcgccctc ggccaggaag accagcgagc cggccagctc cggagtgtgc tggcgcacct
     9001 cggccaggaa tcggctcgca gtccaggcga agaggccgct gttccagagc gcgcccgagg
     9061 caatcagggc ttccgcggtg gcgcggtcgg gcttctcgcg gaaccgggtc acctgtcgca
     9121 ccgcgccgtc caccggctcg cccgggacga tgtagccgta cccggtctcg gtgcgggtcg
     9181 gagtgatgcc gacggtgatc agggcatcat gctggcgcgc ggcgaagagg gccgcgtccg
     9241 cggtgcggcg gaatccgtcc ggatcgccga gatgccagtc ggcgtgcatc gacagaatcg
     9301 tagcggaggg atcgcgggcc agcgcggtgg tggtccccca cgccaacgcc ggagcggtcg
     9361 aggccgcgac cggctcgacc agcacctggt cggccggcag tccggtcgcc tggcgaagcg
     9421 gctctgccag atcgggcccg gtcaccatca ggatccggcg ccgggtcacc aggggctcga
     9481 ccgcggccac ggccgccacc gcgctcggcg tgggacccgc caatgggagc aattgtttgg
     9541 gatggcgggg tgagctgagc ggccagaacc gcgtgcccga tccgcccgca aggatgacga
     9601 cccagtccat aagcctgccg gttacagcgc gtcggccacc gcgggccggt gccgcctgac
     9661 cagatacagc agctcaccca gatcgacatc gggccgcgcc attacaacca gcgcggcgcc
     9721 gccgtctacc atgcccagaa tggccggccc gccagcgaat tcgaggatcg cggtactggg
     9781 atcgcccaaa cgggcggcgg atcccagctc ggtgacctgg cggatgacgg tcgcggccag
     9841 cgccgccagg gcgtcgccat cggtgccggg cggaagcagg tggtcaatca gc
//
LOCUS       DASWKS010000288         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1638953, whole genome shotgun sequence.
ACCESSION   DASWKS010000288 DASWKS010000000
VERSION     DASWKS010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638953"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..425)
                     /locus_tag="VGA78_08305"
     CDS             complement(180..425)
                     /locus_tag="VGA78_08305"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9893913.1"
                     /translation="MTPTDRLTCGEVFQRLDDFLDRELGPEDMRLVREHLDICLACAA
                     EHRFERGILDGVKEKVRRLSIPEELIARVQAVIVRAR"
     gene            complement(422..>1538)
                     /locus_tag="VGA78_08310"
     CDS             complement(422..>1538)
                     /locus_tag="VGA78_08310"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 57 protein"
                     /protein_id="HEX9893914.1"
                     /translation="LIRESGGRFRMALSLSGVLLEQLATWAPEALESFQELVDSGGVE
                     LLGETYYHSLSGLANQQEFTEQVVQHRRTIGRWFGRTPGVFRNTELIYWDGLAPLVHR
                     LGFNAMLVEGADHVLGWRSPNFVYAAAAEPELRLLPRNYRLSDDVGFRFSRRDWDGWP
                     VTADKYAGWVADSPGNSVNVFLDYETFGEHQWADTGIFEFLRHLPDACFRRGIGFTTP
                     ASLARRPPIGPLSFERPTSWADQERDVTAWLGNRIQQAAHQRLYRLRDAVLASGDPAL
                     VERWRRLTTSDHVYYMCTKWFADGDVHQYFSPWESPYDAFVAFMNVLEDLEQRTTVSA
                     PATLCSEVARSRSARATHSRAAETPPRPSALLTQGSP"
BASE COUNT          262 a          520 c          498 g          258 t
ORIGIN      
        1 gttccccatt gccgctcggc gaggtacggt ccccagcgct tccagcgctg gtcgcctccg
       61 gcctcgagct ccaggcgctt cccctcgacc gtcgtccgga ccacggctgc tcctccggtg
      121 tggatcgtta tcgggctcag aacgtcggga cgcctcggcg tgttcccgga gaaggtgcct
      181 tacctggccc ggacaatcac cgcctgtact cgggcgatca gctcttccgg aatcgagagc
      241 cggcgaacct tctccttcac cccgtccagg attccccgtt cgaagcgatg ctcggcggcg
      301 cacgcgaggc agatgtcgag gtgctcacgc accagtcgca tgtcctccgg gcccagctcc
      361 cgatcgagaa agtcgtcgag gcgctgaaag acttcgccgc acgtcaggcg gtcagtcggt
      421 gtcatggaga accctgcgtc aggagtgctg aaggtcgggg cggcgtctcg gctgcccggg
      481 aatgagtcgc tcgagcggaa cgggagcggg ccacctcgct gcacaaggtg gcaggtgcgg
      541 acaccgtggt tcgctgctcc agatcttcca ggacgttcat gaatgctacg aacgcgtcgt
      601 acggggattc ccaggggctg aagtactggt gcacgtcccc atcggcaaac cacttggtgc
      661 acatgtaata gacgtgatcg ctggtggtca agcgccgcca ccgctcgacc agcgccggat
      721 cgcccgaggc gaggaccgca tcccggagcc ggtagaggcg ctgatgcgcc gcttgctgaa
      781 tgcgattccc cagccaggcg gtgacatcgc gctcctgatc ggcccatgag gtcggccgtt
      841 cgaaggagag cggtccgatc ggagggcggc gcgccaggga cgcgggcgtg gtgaatccga
      901 tccctctccg gaaacaggcg tcggggagat gtctcaggaa ctcgaagatc ccggtgtcgg
      961 cccactggtg ctcgccgaag gtctcgtagt ccaggaagac gttcacgctg ttgccgggac
     1021 tatccgccac ccagccggcg tacttgtccg ccgtcaccgg ccatccgtcc cagtcccgcc
     1081 gcgagaagcg gaatcccaca tcgtcgctga gccggtagtt gcgcgggagc aggcgcagct
     1141 ccggctcggc cgccgccgcg tacacgaaat tgggcgaacg ccagccgagc acgtggtccg
     1201 cgccttccac cagcatggca ttgaatccga gacggtggac cagcggcgcc aggccgtccc
     1261 agtagatcag ctcggtattg cggaaaacgc cgggcgtacg gccgaaccag cgcccgatgg
     1321 tccgccggtg ctggaccacc tgttcggtga attcctgctg gttcgccagg ccggacagcg
     1381 agtggtagta ggtctctccc agcagctcga ctccaccgct gtccaccagc tcctgaaaac
     1441 tttccagcgc ctcgggtgcc caggtggcca gttgctcgag caggaccccg ctcaagctca
     1501 gtgccatccg aaaccggccg ccggactcac gaatcagc
//
LOCUS       DASWKS010000289         3697 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3118265, whole genome shotgun sequence.
ACCESSION   DASWKS010000289 DASWKS010000000
VERSION     DASWKS010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3697
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3118265"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1109)
                     /locus_tag="VGA78_08315"
     CDS             complement(15..1109)
                     /locus_tag="VGA78_08315"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9893915.1"
                     /translation="MRALVLSHHYLDPAKRQKLRELAGLGWTITLALPGGSTDMDGAI
                     RLAPVPATGSIDQPQSLKWSARALRRLLTDIRPDILHVEEEPESPAAYVAVHEALKLE
                     IPSVVFSWQSLPRRQSFGESRRRRRTLAEVCGIIGGNQMAAHLLSEGAADVPALSLPQ
                     HGVTPPPLIERTPRPTLALACVGRLVPERGVDQLLHACGQLMGPWTLAVAGTGPEQIE
                     LEEQAQRLGLAARIRWMGPISKAQVTALWPEVDCLVVPSRSTPTWTEEYSPVLVDAMS
                     HGVAAVVTAEGALPELVGDAGIVVRSDEDLLTALQQLIVTPRRRTELGQAARLRVLER
                     YSGAAIARRTAEFWTEVVSRSRTPRSTVNS"
     gene            complement(1354..2445)
                     /locus_tag="VGA78_08320"
     CDS             complement(1354..2445)
                     /locus_tag="VGA78_08320"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893916.1"
                     /translation="MHRTARFLLAIGAGTLLAPDAGAQVRSAQTARDSLVAVLAKLDA
                     QHGFHGVVLLAEGGKVVHHSAHGLSHKGYQVANRPDTKFNLASVGKTFTAVAIGQLVE
                     QGKLRFSDTLIKVLPDYPNPAIARKVTIGQLLSHRSGMGLYWDALFKGNWTAVRTLAD
                     LVPYFAKDTLLFEPGTKWFYSNTGFAVLALVVEKVSGEDYFSYVKRHIFTPLGMTGTD
                     FYPLDVDMPNLAIGYYRNEQGVLKNNLFTHTVRGSGAGGGFSTAPDLLKWAEGLRANT
                     VLGRDISSQMLSKQTNTDGGPGGYGYGFIVQQRDGQTVLGHSGGFPGIVTLFYFNPAK
                     HRVAIAMSNHPGPEVREIGALLTAYLTAP"
     gene            2519..>3697
                     /locus_tag="VGA78_08325"
     CDS             2519..>3697
                     /locus_tag="VGA78_08325"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9893917.1"
                     /translation="MIRSFLRSSRSVVPLMLLALSPPAGLVAQAAVAPPTRLTAQIRS
                     AVIDTVVARLARIYVEADTGVLIGQGLRKKLAAGAYDQLDNPAQFGEAVTRDLRAING
                     DLHLSLRFAPGGGENRSGPQGDPTRQNFGLGRVDILDGNVGYLEITGFAGARGYQEVV
                     ADALRFLARTDAVIIDVRRNPGGSGEMSHFVFSHFLSATPVPTIRVKRRAPSEPVVRR
                     SLAEVPGPRRPEVPLYVLTSQSTGSAAEEFSFVLKNQRRATIVGSRTAGAGHMVNIVR
                     AGHGFLLGLSITRVSDPETGKEWEGVGVQPDIAVPAERALVEAHVAALRTILSANTDA
                     DWGRRLERFLATADARRNPQPIDPARLARLAGNYDGRVVSISNGRLFLARRAGGLGEE
                     L"
BASE COUNT          600 a         1235 c         1238 g          624 t
ORIGIN      
        1 cccaccgttc actgttagct gttcaccgtt gaccggggcg tccggctgcg cgaaaccacc
       61 tcagtccaga attcggcggt gcgccgggcg atcgcggcac cggaataccg ctccagcact
      121 cgtaaccggg cagcctgccc cagctcggtc cgccttcggg gcgtcacaat cagctgctgg
      181 agcgcggtga gcaggtcctc gtccgagcgc acgacgatgc cggcatcgcc caccagctcc
      241 ggcagggccc cttccgccgt gaccacggca gcgacgccgt gggacatcgc gtccaccagg
      301 accggggagt actcctcggt ccaggtcggc gtcgatcgcg acggcacgac cagacagtcg
      361 acctcgggcc agagcgcggt gacctgggct ttgctgatgg gtcccatcca ccggatccgg
      421 gccgccagac ccaatcgctg ggcctgttcc tccagctcga tctgctcggg gccggttccc
      481 gccactgcca gcgtccacgg acccatgagc tgaccgcagg catgcaacag ctgatccacc
      541 ccccgctccg gcaccaggcg accgacgcag gcgagggcga gcgtcggtcg gggagtccgt
      601 tcgatgagcg gcggtggggt caccccgtgc tggggcaggg acagggccgg gacgtcggcc
      661 gccccttctg atagcaggtg tgcggccatc tggttcccgc cgatgatgcc acacacctcg
      721 gccagggtcc gcctgcggcg gcggctctct ccaaacgatt ggcgacgcgg cagactctgc
      781 caggagaaca ccaccgaggg gatctcgagc ttgagggctt catgcaccgc gacataggca
      841 gcgggtgact ccggctcttc ctccacgtgc aggatgtcgg gcctgatgtc ggtgagcagc
      901 cgccgcagcg cccgggcgct ccacttgagc gattggggct gatcgatcga gccggtggcc
      961 ggaaccggcg ccagccggat ggctccgtcc atgtcggtgc tgccgccggg aagagcgagc
     1021 gtgatggtcc agccgagccc ggcgagctcg cgcagcttct ggcgtttggc aggatcgaga
     1081 tagtggtgcg aaagaacgag ggcgcgcacc gggggaatgt aatgccgaaa ccgaccggga
     1141 gggccggcgt agggagctca tggatccttt ggtgatcaag ccccgacccg aggccttcgt
     1201 gatgctccgc ctgattgctc ccgcgcttgc tctggtcctg gcggccgatc tgggacttac
     1261 ttcgtggaaa acccgggcca ggccctctcg gcgctcatca ttccgctcaa gaccttcgtt
     1321 cccggcccag cggcgaagtg agacgtgggc cgctcagggc gcggtgaggt aggcggtgag
     1381 cagagccccg atctcccgga cttccggtcc cgggtgattg gacatcgcga tcgccacccg
     1441 gtgcttcgcc gggttgaagt agaacagcgt gacgatgccg gggaatcccc cgctgtgtcc
     1501 cagcacggtc tggccatccc gctgctgcac gatgaatccg taaccgtagc ctcccggacc
     1561 accgtcggtg ttggtctgct tgctcaacat ctggctggag atgtcgcggc ccagcaccgt
     1621 gttggcgcgg aggccctcgg cccacttcag caggtcgggc gcggtggaga atccgccgcc
     1681 cgctccgctc cctctcacgg tgtgggtgaa gaggttgttc ttgagcactc cctgctcgtt
     1741 ccggtaatag ccgatcgcca ggttcggcat gtcgacatcc aggggataga agtcggtgcc
     1801 cgtcatgccg agcggggtga agatgtgccg cttgacgtaa ctgaagtaat cctcacccga
     1861 gaccttttcc accaccagag cgagaacggc aaaaccggtg ttgctgtaga accacttggt
     1921 gccgggctcg aacagcagcg tgtctttcgc gaagtacggc accaggtcgg ccagggtccg
     1981 caccgcggtc cagtttcctt tgaagagagc atcccagtag aggcccatgc cggaccggtg
     2041 gctgaggagc tgcccgatcg tcacctttcg cgcgatcgcg gggttgggat agtccgggag
     2101 caccttgatc agggtgtcgc tgaaccgaag cttgccctgt tccaccagct gaccgatcgc
     2161 gaccgcggtg aaggtcttgc ccaccgacgc caggttgaat ttggtatcgg gccggttggc
     2221 gacctggtac cccttgtggg agaggccgtg ggccgagtgg tgaacgacct tgccaccctc
     2281 ggccagcagc accacaccgt gaaacccgtg ttgcgcatcg agtttcgcga ggaccgcgac
     2341 cagcgaatcg cgggcggtct gggcggagcg aacctgggcg ccggcgtccg gcgcgagcag
     2401 cgttccggct ccgatagcca gcagaaaacg agcagtgcga tgcaagggga acctcctctc
     2461 ccagactacc ggtgagccac cgcctttgtt tcaccccttc aaccagttcg agccggccat
     2521 gatccgttcg ttcctccgat cctctcgctc cgtcgtcccg ctgatgctgc tggctctgtc
     2581 tccgccagca ggactcgtgg cccaggccgc ggtggcgccc ccaacccggc tcaccgccca
     2641 gatccggtcc gccgtgatcg atacggtcgt cgcgcggctg gcccgaatct acgtggaagc
     2701 ggataccggc gtgctgatcg gccaaggact ccgaaagaag ctcgcggccg gggcctacga
     2761 tcagctggac aacccggccc agttcggcga agcggtcact cgcgacctcc gcgcgatcaa
     2821 cggagatctt cacctgagcc tccgcttcgc tcccgggggt ggggagaacc ggtccggacc
     2881 gcagggagat ccgacccgac agaacttcgg gctcggccgg gtggacatcc tggacggcaa
     2941 tgtgggatat ctcgagatca cggggtttgc cggggccaga ggttatcagg aggtggtggc
     3001 cgatgcactt cggttcctgg cccgtaccga cgccgtcatc atcgacgtca ggcggaaccc
     3061 gggcggcagc ggggagatga gtcatttcgt gttcagccac ttcctgagcg cgaccccggt
     3121 cccgaccatc cgggtgaagc ggcgggcacc ttcggagccg gtggtccggc ggagtctggc
     3181 ggaggtacct ggcccccggc gacccgaggt cccgctctac gtgctgacca gccagtccac
     3241 cggctccgcc gcggaggagt tcagtttcgt tttgaagaac cagcgccgag ccaccatcgt
     3301 cggtagccgg actgccggcg caggtcacat ggtcaacatc gtgcgcgccg gccacggctt
     3361 tctgctcggc ctgtcgatta cccgggtatc cgatcccgag accggaaaag aatgggaggg
     3421 ggtaggggtg cagcccgaca tcgcggtgcc ggccgagcgg gcgttggtcg aagcccacgt
     3481 ggccgccctt cggaccatcc tcagcgctaa caccgacgcc gactggggcc gccggctcga
     3541 acgtttcctg gccacggcgg atgcccgccg taacccgcag ccgatcgacc cggcgcgact
     3601 ggcacgtctg gcagggaatt atgacggccg ggtggtatcg atctccaacg gccggctctt
     3661 cctggcccgc cgtgccggcg gtctgggcga agaattg
//
LOCUS       DASWKS010000290         3932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_526478, whole genome shotgun sequence.
ACCESSION   DASWKS010000290 DASWKS010000000
VERSION     DASWKS010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3932
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526478"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..1299)
                     /locus_tag="VGA78_08330"
     CDS             complement(325..1299)
                     /locus_tag="VGA78_08330"
                     /EC_number="4.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase family protein"
                     /protein_id="HEX9893918.1"
                     /translation="MAPALERMNQLPRVPLGHFPTPVERMERLRTAIGGGPVLLIKRD
                     DAIPFGFGGNKVRKLSWVIGEALAQQADTIITCGGVQSNHARATTAAAVSNGLRAVLV
                     ANGTPQSAPTGNALLDALMGAEIHYVESREERVPAMEALADRLRSEGRRPYVVPLGAS
                     TPLGALGYVDAVGELLAQGVRPDVIVHACSSGGTQAGILAGTALYGLEAQVIGVSADD
                     PASAVTATVRSTLRGMAQLLGANGARWPDSLAIQVDDTQVGEGYGVPTLRSREAQQLA
                     AQSEAVFVDHTYTAKALGALLAWVREGRFTPEQSILFWHTGGQVGLFA"
     gene            1390..3690
                     /locus_tag="VGA78_08335"
     CDS             1390..3690
                     /locus_tag="VGA78_08335"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX9893919.1"
                     /translation="MILRHLLLLVTVATPARLPAQWLDSARTRLAQVEGEIRVAGLDS
                     AVEVRRDRWGVPHIYARTVRDLFFAQGFVAAQDRLWQIDMWRRIGEGRVSEVLGPEYL
                     ERDRFARLLKYRGDMEAEWASYAPDTRLIVTAFVAGLNAWVRVARERPPIEYSLLGFL
                     PEPFADDVPLQRMAALAMTGNATSEIERAAAVTILGRARAERLFPLDPLRPLDPAPGV
                     DLSALSAHSLGATYDAYRNLNYSRIDGSNNWVVSGSHTATGKPLLANDPHRAITTPSL
                     RYLTHLVGPGWNVIGAGEPAVPGVAGGHNQRIGFGFTIVGMDQQDVYVERLGRCPTGS
                     TRRCYLTGTGWRPVRTQVDTIPVKGHPARMVQLEFTEHGPIVAEDSTGRGFVIKFVGA
                     EPGTAGYLAQISINRATDWESFKAATARWKLPTENLVYADVDGNIGWVGAGLMPIRSW
                     TGMLPVPGDGRYEWQGFLPFADLPMSFNPPSGVIATANHNILPPGYTKPLSYEWAEPS
                     RFNRIVEVLTGRKGWTRQDFERLQHDELSIPARELVPLLLAAGQRQGTKGAAWEQMTE
                     WDYVMRKEAAAPLLFAAWLDSLSSGGFALAAGAEARALGRAGVTSLELPVLVRLVKEP
                     GRDSLLVGSFEAAAAALRDRFGDDPAHWRWGAVHRASFRHPLVRALDLPEASRGGHWT
                     TVHMTGGPNLRQAYGASFREILDFADWDNSVATSVPGQSGQPGSPFYGNLRPLWERGE
                     YFPLVYSRAAVERNTVHVLILTPGQE"
BASE COUNT          669 a         1298 c         1329 g          636 t
ORIGIN      
        1 cggatacggt gcggcagttc tccgagtcaa cccgggatga ggggaagacg tggacggtca
       61 actatgatct gctgtacacc aggaagcgct gaaccatcca gcgacttagc gattcagtga
      121 tttagcgatt acgctcggcg cggattggcg cgccaataac aaccagcaat cgtcaaatcg
      181 ctgaaccgct gaatcgtcaa ttgtctccgg cacgggcatc aaggaggtcg gttcgattta
      241 gcgattggcc ggttgactcc aaaccagctg ggcgtaatcg ctgaatcgcg aagcgtcaaa
      301 ccgctaaagg tccgtaatgt gccgtcacgc aaacaatccg acctgtcccc cggtatgcca
      361 gaagagaatc gattgctcag gagtgaaccg tccttcccgc acccaggcga gcagtgctcc
      421 cagcgccttg gcggtatagg tgtgatccac gaacacggct tcggactggg cggccagctg
      481 ctgggcctcg cgcgaccgga gcgtcggcac cccgtagccc tctcccacct gagtatcgtc
      541 gacctggatc gccaggctat cgggccagcg ggcgccgttc gctcccagca gctgggccat
      601 tccgcgcaag gttgaccgga ccgtcgccgt cacggcggac gcgggatcgt cggcgctcac
      661 gccaatcacc tgggcttcca ggccgtagag cgcagtgcct gccagaatgc cggcttgggt
      721 tccgcccgac gaacaggcgt gcacgatcac gtcgggccgc acgccctgcg ccagcagctc
      781 tcccaccgcg tcgacgtatc ccagtgcgcc gagcggggtg gacgcgccca gcgggacgac
      841 atagggccgg cgcccttcgc tccgcagccg atcggccagg gcctccatgg ccgggacccg
      901 ttcctcccgg gattcgacgt agtggatctc ggcccccatg agcgcgtcca gcaacgcgtt
      961 gccggtagga gcgctctggg gcgtgccgtt ggccaccagc acggcgcgga gcccgttgct
     1021 caccgccgcg gcggtggtgg cgcgggcatg attcgattgc actccgccgc aggtgatgat
     1081 ggtgtcggcc tgctgcgcca gcgcctcccc gatcacccac gacagcttgc gcaccttgtt
     1141 gccgccgaac ccgaacggaa tggcgtcatc ccgcttgatc agcaggacgg gaccgccgcc
     1201 gatggccgtg cgcaggcgct ccatccgttc caccggggtc gggaagtggc ccagggggac
     1261 gcgggggagc tgattcatcc gttcgagcgc aggagccatt gacgattcac gattgacgat
     1321 tgacgattga gcaagcatag caccgtgcct ccgcggccgt aatcgtcaac cgtcaatcgg
     1381 caatcgtcaa tgatcctgcg ccacctgctg ctcctggtaa ccgtcgccac cccggcccgc
     1441 ctgcccgccc agtggctcga ctcggcccgg acccgactgg cccaggtcga gggcgagatc
     1501 cgggtggccg gtctcgacag cgcggtggag gtacgccggg accggtgggg cgtgccgcac
     1561 atctacgccc gcaccgtgcg ggacctcttc tttgcccagg gattcgtcgc ggcgcaggac
     1621 cggctgtggc agatcgacat gtggcgccgg atcggggaag ggcgggtctc cgaagtcctc
     1681 ggcccggagt acctggagcg ggaccgtttc gcccggctgc tcaagtaccg gggcgatatg
     1741 gaggccgagt gggccagtta cgcgcccgat accagactca tcgtcaccgc cttcgtggcg
     1801 ggcctcaacg cctgggtccg ggtggcgcgc gagcggcctc cgatcgaata ctcgctgctc
     1861 gggtttctgc ccgagccatt tgccgacgac gtgccgctgc agcgaatggc cgcgctggcc
     1921 atgaccggca acgccaccag cgagatcgaa cgcgccgcgg cggtcactat tctgggccgg
     1981 gctcgagccg aacggctgtt cccgttggat ccgctccggc cgctcgaccc cgcgccgggg
     2041 gtcgatctct cggccctcag tgcccactcg ctgggtgcga cctacgacgc ctaccggaat
     2101 ctcaactact cccggatcga tggctccaac aactgggtgg tgagcggctc ccacaccgcc
     2161 accggcaagc cgttgctggc caacgatcct catcgggcca tcacgacccc gtcgcttcgc
     2221 tatctgactc acctggtggg gccgggatgg aacgtcattg gagcggggga accggcggtc
     2281 cccggcgtcg cgggcgggca caaccagcgg atcggcttcg gcttcaccat cgtgggaatg
     2341 gatcagcagg atgtgtacgt cgagcggctg ggccgctgtc ccaccggctc gacccggcgc
     2401 tgctacctca ccggtaccgg ctggcggccg gtccgcaccc aggtggacac cattccggtc
     2461 aagggacacc cggcccggat ggtgcagctc gaattcaccg agcacggacc gatcgtggcg
     2521 gaggattcca ccggccgcgg attcgtgatc aagttcgtgg gcgcggagcc gggcaccgca
     2581 ggatatctgg cccagatctc catcaatcgc gccactgact gggagagctt caaggcggcg
     2641 acggcgcgct ggaagctgcc gaccgagaac ctggtgtacg ccgatgtgga cgggaacatc
     2701 ggctgggtcg gcgcgggctt gatgccgatc cgttcctgga ccgggatgct gccggtaccc
     2761 ggcgatggcc gctacgaatg gcaggggttc ctgccgttcg ccgatctgcc gatgagcttc
     2821 aacccgccct caggggtcat cgccaccgcc aatcacaata tcctgccgcc gggatacacc
     2881 aagccgctca gctatgagtg ggccgaaccc tcacgcttca accggatcgt ggaagtgctc
     2941 accgggcgaa agggctggac tcggcaggac ttcgagcgac tgcagcatga cgagctgtcg
     3001 attccggccc gcgagctggt gccattgctc ctggccgcgg gccagcgcca gggtaccaag
     3061 ggcgcggcgt gggagcagat gacggagtgg gactacgtga tgcggaagga ggcggccgcg
     3121 ccgctcttgt tcgccgcgtg gctggactcg ctctcctcgg gcggattcgc gctggcggcc
     3181 ggagccgagg ctcgtgcgct gggtcgggcc ggcgtgacca gtctggagct gccggttctg
     3241 gtgcggttgg tgaaggagcc cgggcgcgat tccctgctgg tgggctcctt tgaggccgcc
     3301 gccgcagccc tccgggaccg gttcggcgat gacccggctc actggcgctg gggcgcggtg
     3361 caccgagctt ccttccgcca tcccctggtc cgagccctcg acctgcccga ggcgagccga
     3421 ggaggccact ggaccacggt gcacatgacc ggcggcccta acctgcggca ggcgtatggg
     3481 gcgtcgttcc gggagatcct cgactttgcc gactgggaca actcggtggc gaccagcgtg
     3541 ccgggccagt ccggccagcc aggaagtcct ttctatggca acctgcgacc gttatgggag
     3601 cggggagagt acttccccct ggtctattca cgggcagcgg tggaacggaa taccgtccac
     3661 gtcctcattc tcacgccagg gcaggaatag gaaacaggaa gcaggagcag ggagcaggga
     3721 gcaggaagca gggagcagga agcagggagc aggaagcagg gagcagggag caggaaacag
     3781 ggagcaggaa acagggagca gggagcaggg agcagggagc aggcacagac acccatctct
     3841 gaaacttcct gcttcctgct ccctgctcac tgctcccttc tccctgctcc ccgtcagagc
     3901 acgagaggtg tcagaatcga caggatcagt gc
//
LOCUS       DASWKS010000291         1591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2385567, whole genome shotgun sequence.
ACCESSION   DASWKS010000291 DASWKS010000000
VERSION     DASWKS010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2385567"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VGA78_08340"
     CDS             complement(<1..597)
                     /locus_tag="VGA78_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9893920.1"
                     /translation="MATASEPLVVPPPAEPPAPWLEELPPRQIVAELDRYIVGQDAAK
                     KAIAIAVRNRWRRSQAPDELRDEITPSNIILIGPTGVGKTEIARRLARLAGAPFIKVE
                     ASRFTEVGYVGRDVESMVRELVDSGITLVRTEREDEVYGEAERRADDKLLDLLLPPPA
                     VPERDGHGLLGVVLADDIAVELRHDLARSEIRQTGQSLF"
     gene            complement(748..1299)
                     /gene="hslV"
                     /locus_tag="VGA78_08345"
     CDS             complement(748..1299)
                     /gene="hslV"
                     /locus_tag="VGA78_08345"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX9893921.1"
                     /translation="MHHDPTAFYGTTILAVRKEGRVALGGDGQVTLGDTVVKAGAIKV
                     RSLKGGRVLAGFAGSVADAITLYEKFEEKLDRYPGNLPRAAVELAKDWRSDRVLRRLE
                     ALLVVADIEHAYLLSGGGELIEPDDGVVCAGSGGAFATAAARALLPDPLLSARDVVQR
                     SLDIAADLCIYTNRSITILELPQ"
     gene            complement(1299..>1591)
                     /locus_tag="VGA78_08350"
     CDS             complement(1299..>1591)
                     /locus_tag="VGA78_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX9893922.1"
                     /translation="PGAERQAVFLSRRGRRLAPGTIQRRMHRLYRAGGAEGFRVHSLR
                     HTFATHLMDAGADLRSVQEMLGHASLSTTQVYTHTSVERLKDVYRKAHPRGN"
BASE COUNT          253 a          554 c          519 g          265 t
ORIGIN      
        1 gaacaagctc tggcccgtct ggcggatctc actccgcgcc agatcgtggc ggagctcgac
       61 cgctatatcg tcggccagaa cgacgccaag aaggccgtgg ccatcgcgct ccggaaccgc
      121 tggcggcggc agcaggagat cgagcagctt gtcgtcggcc cgccgttcgg cctcgccgta
      181 gacttcatcc tcccgctcgg tccgcaccag ggtgatgccg gagtcgacca gctcgcgcac
      241 catcgattcc acatcccgcc cgacgtaccc cacttcggta aaccgggagg cttccacctt
      301 gatgaagggc gcgcccgcca gccgggccag ccggcgcgcg atctcggtct tccccacccc
      361 ggtgggaccg atcaggatga tgttggaggg ggtgatctca tcgcgcagct cgtcgggcgc
      421 ctgggaccgg cgccagcggt tccggaccgc gatggcgatc gccttcttgg ccgcgtcctg
      481 gcccacgata tagcggtcca gctccgccac gatctggcgg ggcggcagct cctccagcca
      541 gggggcgggc ggctcggccg gcggagggac gaccagcggt tcggaggcgg tagccatatc
      601 cggaaactac caacaaacgg gacacggtga acagtcaacg gtgaacggtg aacggccaac
      661 ccagctccgt tcactgatcg ttattcactg ttcactgttc actgttgact gttcactgtt
      721 cactgttgac tgttcactgt tgactgttta ctggggtagt tcgaggatcg taatgctacg
      781 attggtgtag atgcagagat ccgccgcgat gtcgagcgac cgctggacca catcgcgggc
      841 cgagagcagc ggatcgggca ggagggcccg cgcggcggcg gtggcgaagg ctccgcccga
      901 gccggcgcag acgaccccgt catccggctc gatcagctcg ccgccgccgc tcaacaggta
      961 ggcgtgttcg atgtcggcga ccaccagcag cgcttccagc cgccgcagga cccggtcgct
     1021 gcgccagtcc ttcgccagct ccaccgcggc gcggggcaga ttcccggggt agcggtcgag
     1081 cttctcctcg aacttctcgt acagcgtgat ggcgtcggcc acggagccgg caaagccggc
     1141 cagaaccctc ccgcctttga gcgacctcac cttgatcgcc ccggccttca ccacggtatc
     1201 gcccagcgtg acctggccat cgccgcccag cgccacgcga ccctctttgc ggaccgcgag
     1261 aatggtggtg ccgtagaacg ccgttggatc gtgatgcact agttccctcg cgggtgggcc
     1321 ttccggtaca catccttgag ccgctccacg ctggtgtggg tgtacacctg cgtggtgctg
     1381 agcgacgcgt gacccagcat ctcctgcacg ctccggagat cggctccggc atccatcagg
     1441 tgggtcgcga aggtatggcg cagcgaatgc acccggaagc cttcggcgcc gccggcccgg
     1501 tacaaccggt gcatgcgccg ctggatggtg ccgggcgcca gccgccggcc ccgccggctc
     1561 aggaacaccg cctgccgttc cgcaccgggg c
//
LOCUS       DASWKS010000292         9105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2739530, whole genome shotgun sequence.
ACCESSION   DASWKS010000292 DASWKS010000000
VERSION     DASWKS010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9105
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2739530"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1055
                     /locus_tag="VGA78_08355"
     CDS             <1..1055
                     /locus_tag="VGA78_08355"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEX9893923.1"
                     /translation="LILWEAGVAAPKLYPVEVTVDAAALERYLEQVLPGEDVTVTSSG
                     NSITLSGTVKDPNSVARALQIAQATGVTSVIDNLVAPPAVQVLLQVRFAEINRSALKD
                     FATTLRTLNPQDLDSDGDWFGESISDGLLRIMLTNPAANIEALFTSSASRGLLRNLAE
                     PNLLTLPGKEANFLAGGEFPYPSVQGGAANNAVSIVFKEFGIRLKFTPNITRSGAIRL
                     QVEPEVSSLDFANGLVISGFAIPTILTRRMKTEVELAEGQWLALAGLIDNTTLENVTK
                     IPILGDIPILGQFFRSTSAQARQTELLVLVTPRLIRATDGPPPPVPTGEPITWKWPGW
                     MRRALEQQRPTTPPQG"
     gene            1094..2482
                     /locus_tag="VGA78_08360"
     CDS             1094..2482
                     /locus_tag="VGA78_08360"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HEX9893924.1"
                     /translation="MTRQRFSVRNQRGQALALVAVTVVGLLAMMSLAIDLSMMYKTRA
                     EAQRAADAVALAGASVFLEPIGPSTVDSAHARAWALADTNYLQGGRQIDVLTDVSACT
                     KNGDELLCPEMTVLVIPDSFKVRAWIYRKQVGTFFASVLRIFHVQIGAMAAARAVEAG
                     TGTCIKPFILPDYWVENTGEDLSANQIWDNSGAARKSGGGCGSAPGDPECWQYDATAQ
                     VPDYYRQYNDSTSLPAQWTGLNSDWRNMFADNNGVRYEDDIGRPITLYPGGPGGGQNP
                     AIPSNWQLWRIDCDGDGQPDAGANCIKEAICCTDPGPPCNATAYNPCGCRSPEVQVGA
                     LMDEQPGDVDAIANSLQEWIQTDPNAEWHVDGIDGQGYTRGHVETGDPRWASNPLTSP
                     RVFIAAVMEPGYLDQGFQQVPLLTLARFFLESVPSKPGTGESVIVRYLGFAGGLEGPS
                     ILPTTFRLQLVE"
     gene            2499..3740
                     /locus_tag="VGA78_08365"
     CDS             2499..3740
                     /locus_tag="VGA78_08365"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9893925.1"
                     /translation="MAGHRLRGVLLTTDPGLRDTIQAYSRANPGSLALTLELSLGLAE
                     FSGAQFQAVRQAAPAVVLLDVDQEPELGINLAHDLSLASDDLVLVAIGRELSSELLLR
                     AMRAGVAEYLVKPVTPAGLSDALDRLRPRLSPALESSGSLGRCYAFFSAKGGSGASTA
                     ATNVAVELQRITGRRTLLIDLDAELGEISLLLGVQPKFNFVDLVQNFHRMDANLLGSY
                     IEQHPSGVHLLSAPFHPDRASTVSEDQVRQIVMYLKGQYDYVIVDTSKTFSPVTLAAF
                     EQADEVFLIATVDLPSLRNIQRTLPLLERMMPEGKKQLHLVINRYNPNNEITTRDVER
                     SLSLPVFGTLANDYETLIRSVNAGRPAVLSSPRSPYVRDVRQLASRLAGVQVEATSPS
                     GLFKVFRRGKDSSQKGGTSSA"
     gene            3733..5133
                     /locus_tag="VGA78_08370"
     CDS             3733..5133
                     /locus_tag="VGA78_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX9893926.1"
                     /translation="MPDPVRSQLPWEAPSGPVRPTPGDRASIESTPETSAAHQFAMLK
                     GRIHRRLLERLNLANLEKLDRAQVVDAIRKVVHELLVVEKVPLNFEEREDLIRQILDE
                     IFGLGPIEPLMKDPEVSDILVNTWRQVIIERHGKLEPTDIQFQDDRHLLQVIDRIVSA
                     VGRRIDDSSPMVDARLPDGSRVNAIIKPLAIDGPHLSIRKFKRDALTGEDLIRFDSVN
                     EPMLELLSGIVKARLNVLISGGTGSGKTTLLNVLSGFIPHNERIVTIEDSAELQLRQP
                     HVVRLETRPPNIEGEGAVPQRLLLINALRMRPERIIVGEVRGAEAVDMLQAMNTGHDG
                     SLTTLHANTPRDALTRLETMVAMANLNLPEKAMRQQVASAIQVVIQVARLTDGTRKVV
                     GIGEITGMEGEVISMQDIFVFERLGIGEGGKVQGRFVATGIRPRFADRLKSYGISLSS
                     VLFENMAEVMNLRGRR"
     gene            5136..6107
                     /locus_tag="VGA78_08375"
     CDS             5136..6107
                     /locus_tag="VGA78_08375"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9893927.1"
                     /translation="MSPTLITAILVFVAVALGTVSLVLLGEWVRDLVRARGVVKQLKE
                     FAETGVGESAGLIRAAPGDRARWLEELTARAPRVRDLEGLLRQAGSGWSLQGFLFLSF
                     GVSVGLGIAAFIISRSLFLGGLMAVLGGVAPYLGVRRRATRRLYKFEEQLPDAIDLMG
                     RAIRAGHPLTAGFKMVADETSEPISTEFRQVFEEQRFGLAFEDSMFAMADRIPIPDVR
                     ILNTAILIHRQVGGNLAEVLDNLAYVIRERFKLRRQLRVITAQGRLSGYVLAALPLVL
                     GIVIFLLNRDYMMTLFDKSLGRLMVIAAAVMQTMGYLWIRRIVDIEF"
     gene            6111..7034
                     /locus_tag="VGA78_08380"
     CDS             6111..7034
                     /locus_tag="VGA78_08380"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9893928.1"
                     /translation="MAFLIAALVSLAVIGVVMLVVQLAPSQPDALRRLQEMPFDTGMR
                     STLERRRREERSEQLRKLLETLGTRVEGGRDLPQSRRLLMTAGYMAPGAVQMFFGARM
                     ALAAILALASLSLAPVLQIPVAFAAFAALWGALLGWVLPVFIVRARAKSRQKEMIKAM
                     PDALDLLVVCVEAGLGLNQALVKVAEEIANISPVLGEQFGLVNLEIRAGTPREEALRN
                     LGERTDVEDIRSFATMLIQTDRFGTSVANALRVHADTLRVKRRQRAEEASAKTPIKML
                     FPLVFFIFPAMFVVILGPALLQIAEAMQQFR"
     gene            7031..7417
                     /locus_tag="VGA78_08385"
     CDS             7031..7417
                     /locus_tag="VGA78_08385"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX9893929.1"
                     /translation="MRTVVVRNPRRDATLGRAVGMADRWWLRLRGLLGRPRLRAGEGL
                     LLVPCRGVHTVGMREPLDIAVLDRVGTVIAVYPALPPGRGTPLHRRGVAVLELPAGTL
                     ALTGTVPGDPLEWAEEGRSPVTGAAA"
     gene            7414..8763
                     /locus_tag="VGA78_08390"
     CDS             7414..8763
                     /locus_tag="VGA78_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893930.1"
                     /translation="MSTGFIPPAAVSDEIPVRAQSVPLVPQTLEDVGLPAEFIVDLIL
                     KALYVQGARTGQQLTDLIRLPFPFIDDQLLTLQQRQLIEVLGTSGASRAGYMFDLAGE
                     GRGRAHEALMGCQYVGPAPVPLEQYRRFTTTQSIQGVQVTRPQVEQGFSWLVLKQAVL
                     DEVGPAINSGRSLFLYGESGNGKTAIAETIARMLGGSMFVPYAVEVDGQVIVTYDPLH
                     HRPPHDDEPLPPDVGPLWLRDAAFDQRWTRTARPVVLVGGELTLDQLDLQYDEYTKLY
                     QAPFQVKANGGVLIVDDFGRQRMPPRDMLNRWIVPLEKRVDFLTLHTGAKFPVPFDCL
                     LVIATNIDPRQLVEEAFLRRIHYKIHVESPSVEQYERIFLGCCKERDIPYDPAAIRQI
                     YQSFYQAYGIAPRGCHPRDLLDHLVDIAKYLETRPVLTPDLIERAGGSYFLDFPTAP"
     gene            8786..>9105
                     /locus_tag="VGA78_08395"
     CDS             8786..>9105
                     /locus_tag="VGA78_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893931.1"
                     /translation="MTETDAQAAQPERRRHEAQLVHRMYQLEVENGRLRRLTLGTLVV
                     VALLLGVSAAIVVVAARHGMPGFVPAVVESREFVLRDREGRVRGAWGEDDQGAIRLVL
                     QDHA"
BASE COUNT         1471 a         2983 c         3137 g         1514 t
ORIGIN      
        1 gcctgatcct ctgggaagcc ggcgtggccg cgcccaagct ctacccagtg gaagtgacgg
       61 tggatgcggc ggccctggag cgttacctgg agcaagttct accgggtgag gacgtcacgg
      121 tcacctcgag cggcaactcg atcaccctct cgggcacggt aaaggatccg aactcggtgg
      181 cccgggcgct gcaaatcgcc caggcgaccg gggtgacgag cgtgatcgac aacctggtcg
      241 cgccgcccgc ggtgcaggtg ctcctccagg tccggttcgc cgagatcaac cggagcgcgc
      301 tcaaggactt cgcgaccacg ctgcggaccc tgaatcccca ggacctggac agcgacggcg
      361 actggttcgg cgagagcatc tcggacgggc tgcttcgcat catgctcacc aaccccgccg
      421 ccaacatcga ggcgctgttc acctcctcgg cgtcgcgggg gctgctccgg aacctggccg
      481 agccgaacct cctgaccctc cccggcaagg aagccaactt cctggccggt ggggagttcc
      541 cctacccctc ggtccagggg ggggccgcca acaacgcggt cagcatcgtc ttcaaggaat
      601 tcggaatacg gctgaagttc acccccaaca tcacccggag cggcgccatc cggcttcagg
      661 tagagccgga ggtctcctcg ctcgacttcg cgaacgggct ggtcatcagc gggttcgcca
      721 ttccgacgat cctgacccgc cggatgaaga ccgaggtcga gctggcggag ggccagtggc
      781 tggccctggc agggctgatc gataacacga cgctggagaa cgttaccaaa atcccgattc
      841 tgggcgatat tcccatcttg ggccagttct tccggtccac cagcgctcag gctcgccaga
      901 ccgagttgtt ggtgctggtg actccccggc tgatccgggc gacggacggg ccgccgcccc
      961 ccgtccccac cggggagccg atcacgtgga agtggcccgg gtggatgcgg cgggcactgg
     1021 agcagcagcg gcctactacg ccgccgcaag gctaacgcat gggccccgtc aaggcggccc
     1081 ggagggtagg gtaatgacac ggcagcggtt ctcggtgcgc aaccagcggg gccaggcact
     1141 cgccctggtg gcggtgacgg tggtggggct cctcgcgatg atgtcgctcg ccatcgatct
     1201 cagcatgatg tacaagaccc gcgccgaggc gcagcgcgcg gcggacgcgg tagcgctggc
     1261 gggcgccagc gtcttcctcg agccgatagg accgagcact gtggacagcg cacacgcgcg
     1321 cgcctgggcc ctggcggaca cgaattactt gcaggggggc agacagattg acgtcttgac
     1381 cgacgtctcg gcctgtacca agaacggcga tgagctcttg tgccccgaga tgaccgtcct
     1441 ggtcattccc gacagcttca aggtacgggc atggatctac cggaaacagg tcgggacatt
     1501 ctttgccagt gtcctccgga tcttccacgt gcagatcggg gccatggccg cggcgagagc
     1561 cgttgaggcg gggaccggca cgtgcattaa gccgttcatc ttgccggact attgggtgga
     1621 gaatacaggt gaggacctca gcgcgaacca gatttgggat aactcagggg cggcgcgaaa
     1681 gagtgggggc gggtgcggga gcgctccagg ggaccccgag tgctggcagt acgacgcgac
     1741 cgctcaggtg cccgattatt accgccagta caacgactcc acgagcctgc cagcccaatg
     1801 gacggggttg aacagcgatt ggcgcaacat gttcgcggac aacaacggag tccgttacga
     1861 ggatgacatc ggccgcccga tcacgttgta tcccggcggg cccgggggcg ggcagaaccc
     1921 ggcaattccc agcaactggc agctttggag gattgactgc gatggggatg ggcagcccga
     1981 cgctggtgcc aactgcatca aggaggccat ttgttgtacc gatcccgggc ctccttgcaa
     2041 tgcgacggcg tacaacccat gtgggtgtag gtcacccgag gtgcaggtgg gggcgttaat
     2101 ggatgagcag ccgggtgatg ttgatgcaat agcgaattca ctccaggagt ggatccaaac
     2161 cgatccaaac gccgaatggc atgttgacgg gatcgacgga caggggtaca cgagggggca
     2221 tgtcgaaacc ggggatcccc gctgggcctc gaaccccctt acgagcccgc gagttttcat
     2281 cgcggccgtc atggagcccg gttatttgga tcaggggttc cagcaagtac ccctcctgac
     2341 cctggcgcgg ttcttcctcg agtcggtgcc ctcgaagcca ggcaccgggg agtcggtcat
     2401 cgtgcgctac ctcggcttcg cgggcgggct ggaaggtccc agcatcttgc ccacgacctt
     2461 ccgcctccag ctggtggaat gagcagcgga tagaggggat ggcgggccac cgactgcggg
     2521 gcgtcctcct cacgacggac cccgggctgc gcgacacgat ccaggcctac agtcgcgcga
     2581 acccggggtc cttggcactc acgttagagc tgagcctggg cctggccgag ttctcggggg
     2641 cccagttcca ggccgtccgg caggccgcgc ccgcggtggt cctgctcgac gtggaccaag
     2701 aacccgagct cgggatcaac ctggcccacg acctgagcct ggcgtccgac gacctggtgt
     2761 tggtggcaat cgggcgggag ctctcctcgg agctgctgct ccgcgcgatg cgggccggcg
     2821 tggcggaata cctggtcaag ccggtgaccc cggcgggcct gagcgacgcc ctggaccggc
     2881 ttcggcctcg cctgtcgccg gccctggaga gctcggggag cctgggccgc tgctacgcct
     2941 tcttcagcgc caagggcggc tcgggggcct cgacggcggc taccaatgtg gcggtggagc
     3001 tccagcgtat taccggccgg cggaccctgc tcatcgacct ggatgccgag ctgggggaga
     3061 tctccctgct cctcggggta caacccaagt tcaatttcgt ggacctggtc cagaactttc
     3121 accggatgga cgcgaacctg cttggctcct acatcgagca acacccctcg ggcgtccacc
     3181 tgctgtcggc gccgttccat cccgaccggg cctcgacggt gagcgaggac caggtccggc
     3241 agatcgtgat gtacctgaag gggcagtacg actatgtgat cgtggatacc tccaagacct
     3301 tttctccggt gaccctggcg gcgttcgagc aggcggacga ggtgtttctc atcgcaacgg
     3361 tggacctgcc gagtttgcgc aacatccagc ggaccctgcc gctgctggaa cggatgatgc
     3421 cggaggggaa gaagcagctg cacctggtca tcaaccgcta caaccccaac aacgagatta
     3481 cgacccgtga cgtggagcgg tcgctgagcc tgcccgtctt cggcaccctc gccaacgact
     3541 acgagaccct catccggtcc gtgaacgccg ggcgacccgc ggtgctctcc tcgccgcgca
     3601 gcccctacgt tcgggacgtc cggcagctcg cttcgcggct ggcgggggta caggtcgagg
     3661 ccacctcgcc gagcgggctg ttcaaggtgt tccgccgcgg gaaggattcg tcgcaaaagg
     3721 gaggaacttc gagtgcctga tcccgtccgt tcccaactgc cgtgggaagc gcccagtgga
     3781 ccggtgcgcc ccactcccgg cgaccgcgcg tcgatagaaa gcacgccgga gaccagcgcc
     3841 gcgcaccagt tcgccatgct caagggccgg atccaccggc ggctgctgga gcggctcaac
     3901 ctcgccaacc tggaaaagct ggatcgggca caggtggtgg acgcgatccg caaggtggtg
     3961 cacgagctgt tggtggtgga gaaggttccg ctcaacttcg aggagcgcga ggacctgatc
     4021 cgccagatcc tggacgagat cttcggcctc ggtccgatcg agccgttgat gaaggacccc
     4081 gaggtctccg acatcctggt gaacacctgg aggcaggtga tcatcgagcg gcacggcaag
     4141 ctcgagccca ccgacatcca gttccaggac gaccgccatt tgctgcaggt gatcgaccgg
     4201 atcgtgtccg cggtggggcg gcggatcgac gactcgtcgc cgatggtgga cgcccggctg
     4261 ccggacggct cgcgcgtcaa cgctatcatc aagccgctcg cgatcgacgg cccccatctc
     4321 tcgatccgca aattcaagcg ggacgcgctc accggcgaag acctgatccg gttcgacagc
     4381 gtgaacgagc cgatgctgga gctgctgtcc ggcatcgtga aggcgcggct caacgtgctg
     4441 atctcgggcg gcaccggctc ggggaagacc accctgctca acgtgctgtc ggggttcatc
     4501 ccgcacaacg agcgcatcgt caccatcgag gactcggccg agcttcagct ccggcagccg
     4561 cacgtggtgc ggctggagac ccggccgccc aacatcgagg gcgagggggc ggtgccgcag
     4621 cggctgctgc tcatcaatgc acttcggatg cggcccgagc ggatcatcgt cggcgaggtc
     4681 cggggcgcgg aggcggtgga catgctgcag gcgatgaata ccgggcacga cggctcgctc
     4741 accacgctgc acgcgaacac cccccgcgac gcgctcaccc gactcgagac catggtcgcg
     4801 atggccaatc tcaacctccc ggaaaaggcg atgcggcagc aggtcgcgag cgcgatccag
     4861 gtggtgatcc aggtggcccg gctcaccgac ggcacccgca aggtggtcgg gatcggcgag
     4921 atcaccggga tggagggtga ggtcatcagc atgcaggaca tcttcgtctt cgagcggctg
     4981 ggaatcgggg agggcgggaa ggtccagggc cggttcgtgg ccaccggcat tcggccccgg
     5041 ttcgccgacc ggctcaagtc ctacggcatc agcctgtcct cggtgttgtt cgagaatatg
     5101 gccgaggtga tgaacctgcg gggccgccgg taaccatgtc gcccaccctg atcaccgcga
     5161 tcctggtgtt cgtcgccgtc gccctgggga cggtgtccct ggtgctgctg ggggagtggg
     5221 tccgcgacct ggtgcgggcg cgaggcgtgg tgaaacagct caaggagttc gcggagaccg
     5281 gagtcggcga gtcggcggga ctgatccggg ctgccccggg cgaccgggct cgctggctcg
     5341 aggagctgac cgcccgggcc ccccgggtgc gtgatctgga aggcctcctt cgccaggccg
     5401 gcagcggctg gagcctgcag ggcttcctgt tcctcagctt cggcgtgtcg gtcgggctgg
     5461 gcatcgcggc gttcatcatc tcgcggagcc tgttcctcgg cgggctgatg gccgtcctgg
     5521 gaggcgtggc gccgtacctc ggggtgcgcc gccgcgccac ccgccggctc tacaagttcg
     5581 aggagcagct tccggacgcg atcgatctga tgggccgcgc gatccgggcc ggtcacccat
     5641 tgacggcggg cttcaagatg gtggccgacg agacctcgga gccgatctcg accgagtttc
     5701 gtcaggtctt cgaggagcag cggttcgggc tcgccttcga ggactccatg ttcgccatgg
     5761 ccgaccggat cccgatcccc gacgtgcgaa tcctcaacac cgccatcctg atccaccgcc
     5821 aggtcggcgg gaacctggcc gaggtgctgg acaacctggc atacgtcatc cgggagcggt
     5881 tcaagctgcg gcggcagttg cgggtgatca cggcccaggg gaggctcagc ggctacgtgc
     5941 tggcggccct gccgctcgtg ctgggaatcg tgatcttcct gctcaaccgc gactacatga
     6001 tgaccctgtt cgacaagagc ctggggcggc tgatggtgat tgccgcggcg gtgatgcaga
     6061 ccatgggtta tctctggatc cgccggatcg tggacatcga gttctgaccc atggccttcc
     6121 tgatcgcggc tctggtctcg ctggcggtga tcggcgtggt gatgctggtc gtccagctgg
     6181 cgccgtcgca gcccgatgcc ctccggcggc tgcaggagat gccgttcgac accggcatgc
     6241 ggagcaccct cgagcgccgg cgccgggagg agcggagcga gcagctccgc aagctgctgg
     6301 agacgcttgg cacccgggtc gaggggggtc gcgacctccc gcagtcgcgg cgcctgttga
     6361 tgaccgccgg ctacatggcg ccgggcgcgg tgcagatgtt cttcggggcg cgcatggccc
     6421 tcgcggcgat tctcgcgctg gcgtccttgt cgctggcacc ggtgctccag attccggtcg
     6481 cgtttgccgc cttcgcggcg ctctggggcg ccctgctcgg ctgggtgctc ccggtcttca
     6541 tcgtcagggc gcgcgccaag tcccgacaga aggaaatgat caaggcgatg cccgacgcgc
     6601 tggacctcct ggtggtgtgc gtcgaggcgg gattgggcct caaccaggcg ctggtgaagg
     6661 tggcagagga gatcgcgaac atcagccccg ttctgggcga gcagttcggg ctcgtcaacc
     6721 tcgaaatccg agccggcacg ccccgggagg aggcgctgcg caacctgggc gagcggaccg
     6781 atgtggagga catccgctcg ttcgccacga tgctgatcca gaccgaccgg ttcggcacct
     6841 ccgtcgccaa cgcgctccgg gtgcacgcgg acacgctccg cgtgaagcgg cggcagcggg
     6901 ccgaggaagc ctcggccaag acgccgatca agatgctgtt ccccctggtc ttcttcatct
     6961 tccccgccat gttcgtggtg atcctgggac ccgcactgct ccagatcgcc gaggcgatgc
     7021 agcaattccg gtgagaacag tcgttgttcg aaatccgcgt cgcgacgcca cgctcggccg
     7081 cgcggtcggg atggccgatc gctggtggct ccggctccgg ggtctcctgg gccggccacg
     7141 actccgggcc ggcgagggtc tgcttctggt gccttgtcgc ggcgtccata ccgtaggcat
     7201 gcgcgagccg ctcgacattg cagtcctgga tcgtgtcggg acggtcatcg ccgtttatcc
     7261 ggcgctgccg ccgggcaggg gcacccccct tcaccggcga ggggtcgcgg tgctcgagct
     7321 cccggccgga accctcgccc tgaccggcac cgtgcccggg gacccgctcg agtgggccga
     7381 ggagggtcgg agccccgtga cgggagctgc cgcatgagca ccgggttcat tcccccggcg
     7441 gccgtgagcg atgagatccc cgtgcgggcg cagtcggtgc ccctcgtccc acagaccctc
     7501 gaggatgtcg ggctgccggc cgagttcatc gtggatctga tcctcaaggc cctctacgtc
     7561 cagggtgcgc gcaccggcca gcagctcacc gatctgatcc ggctgccgtt ccccttcatc
     7621 gacgatcagc tcctgaccct ccagcagcga cagctgatcg aggtgctcgg gacgtcgggc
     7681 gcgagccggg cgggctacat gttcgacctg gccggcgagg ggcggggccg cgcgcacgag
     7741 gccctgatgg gttgccagta cgtgggtccg gcgccggtac cgctggagca gtaccgccgc
     7801 ttcacgacca cccagtccat ccagggcgtg caggtgaccc gaccccaggt cgagcagggg
     7861 ttttcgtggc tggtgctgaa acaggcggtg ctggacgagg tgggccccgc gatcaactcc
     7921 ggccgctcgc tctttctgta cggggagtcc ggcaacggca agaccgcgat cgccgagacc
     7981 atcgcccgga tgctgggtgg gagcatgttc gtaccctacg ccgtcgaggt ggatggacag
     8041 gtgatcgtga cctacgatcc cctgcaccac cggccacccc acgacgatga gccgttaccg
     8101 cctgacgtcg ggccgctctg gctccgggac gccgcgttcg accagcggtg gacccgaacc
     8161 gcgcgaccgg tggtgctggt cggcggcgag ctgacgctgg accagctcga tctgcaatac
     8221 gacgagtaca ccaagctcta ccaggcgccg ttccaggtga aggcgaacgg cggtgtcctc
     8281 atcgtggatg acttcggccg gcagcgcatg ccgccccgcg acatgctgaa ccgctggatc
     8341 gtcccgctgg agaagcgggt ggacttcctc accctccaca ccggcgccaa gttcccggtc
     8401 ccgttcgatt gcctcttggt catcgcgacc aacatcgatc cccggcagct cgtcgaagag
     8461 gcctttctcc gccggattca ctacaaaatc catgtggaga gcccctcggt ggagcagtac
     8521 gagcggatct tcctgggctg ctgcaaggaa cgggacatcc cctacgaccc ggccgcgatc
     8581 cggcagatct atcagagttt ctaccaggcc tacggcatcg ctccacgcgg ctgccatcct
     8641 cgtgatcttc tcgatcatct ggtggacatc gccaagtacc tcgagacccg acccgtcctg
     8701 actcccgatt tgatcgagcg ggccggtggc tcgtacttcc tggacttccc taccgcgcct
     8761 tgacggcgcg cgcccggagg gcgacatgac ggagaccgac gcgcaggcgg ctcagccgga
     8821 gcgccggcgc cacgaggcgc agctcgtgca tcgcatgtac cagctggagg tcgaaaacgg
     8881 caggctccgg cgactcacgc tcgggaccct ggtggtcgtg gccctgctcc tgggcgtgtc
     8941 cgcggcgatc gtggtggtgg ccgcgcggca cggcatgccg gggttcgtgc cggcggtggt
     9001 ggagtcgcgc gagtttgtgc tccgggaccg ggaagggcgg gtgcggggtg cctggggcga
     9061 ggacgatcag ggcgcgattc ggctggtgct ccaggatcac gccag
//
LOCUS       DASWKS010000293         8330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2385984, whole genome shotgun sequence.
ACCESSION   DASWKS010000293 DASWKS010000000
VERSION     DASWKS010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2385984"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1480
                     /locus_tag="VGA78_08400"
     CDS             <1..1480
                     /locus_tag="VGA78_08400"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9893932.1"
                     /translation="TSAAGAAAIALGPHAAAALQDQDKNAVLALIPKQHDATLQMLRE
                     WIALPSIAAEDIGYPQGAEYMAKLARDAGFPQVEVINTAGKPGVFATLDVGARNWLGI
                     YFMYDVKQYDPAEWTSPPLEGRLVDKPGLGKVIVGRGATNTKGPQTAALAALNAFKAA
                     GKKPPVNIALVCEGEEEIGSPNLREIVFKPQVEAALRKCLGIIIPLGSQSPDGGVEVN
                     LGAKGVIEAELVSTGEKWGRGPAKDIHSSLAASVDSPAWHLVLALATLKKEDGNTIAV
                     EGFYDKIRPLTARQKQILEAAIAKKNEAVMKRTLGVQKWIADESFHDAQVRLVSQPTI
                     NIEGLVGGYTGPGGKTILPYKAVAKVDIRLVPDMTAKETLALLKSHLVKHGFGDIEVN
                     MSGGYDPTETDPDSKLVQGMLATYRRLGVEPLLWPRLAGSWPGVTFTGEPLKLAAGQF
                     GMGHGGGAHAPDEYYVIEASNPKLAGLDGAVKSYVEFLYSLA"
     gene            1866..2756
                     /locus_tag="VGA78_08405"
     CDS             1866..2756
                     /locus_tag="VGA78_08405"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9893933.1"
                     /translation="MRSRERNGHGRSPLTTLGLIGIGLVLVYLAGAWFGQRVMLFPAA
                     WLPAPVGKARAESVQLEPGDQGQALFLPPGPGTPAPFPLVIFAHGNGELADDWVDQFG
                     PVQAWGWAVLLLEYPGYGRAAGRPSQATIRRAMLAAYDWAAQEPRIDSTRIVAYGRSL
                     GGGAAAYLAAGRPITGLILESSFTSIRPLAAKYLVPGWLVRDPFDNLLALQGYRGPLL
                     VLHGAADGLVPIEHGRALGAAVSGAEFHELPCGHNDCPLSWDLIRAFLTKHQLLTPGQ
                     VDRVPPNEPGTTISPTAVRQ"
     gene            complement(2902..3321)
                     /locus_tag="VGA78_08410"
     CDS             complement(2902..3321)
                     /locus_tag="VGA78_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893934.1"
                     /translation="MQLVPTLRLLSFPGAFALATAVSLACTEGVPSAPDQAPPIAAAA
                     GGRPQFVDDDGKYYCKANYSLAYSGSTVYSSYDLNQNGYICEYNKGASTGKPLIVDDD
                     GNQGCPKGYGPACLATGDYGEVWDFNGKKWICVLIPK"
     gene            complement(3380..3856)
                     /locus_tag="VGA78_08415"
     CDS             complement(3380..3856)
                     /locus_tag="VGA78_08415"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HEX9893935.1"
                     /translation="MTIDCDSGVAGGLSKPVRPPWALVASSADVLAARFHARLVALDP
                     EVAALFAKTDPAALQRRLAYTFWALAESLDQPERLVVLVVPLGRRHAGYGVREEHYQL
                     ATEALFEALRDTLGPHSTPELEDQWRELMGLVTAVMERALNGERNPSLGRSETHEY"
     gene            complement(3853..4023)
                     /locus_tag="VGA78_08420"
     CDS             complement(3853..4023)
                     /locus_tag="VGA78_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893936.1"
                     /translation="MGGGFTVEPLGADGIPRTNGPVGIGVQPGWLVLVTNTYAGSIDL
                     TITALCVTAPAP"
     gene            complement(4156..4311)
                     /locus_tag="VGA78_08425"
     CDS             complement(4156..4311)
                     /locus_tag="VGA78_08425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893937.1"
                     /translation="MSRIRLSMLVAIVALFPAARAQAQTTFTACYVPKSGTVYRIKVE
                     GAPSKCG"
     gene            complement(4362..4694)
                     /locus_tag="VGA78_08430"
     CDS             complement(4362..4694)
                     /locus_tag="VGA78_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893938.1"
                     /translation="MRFIVAGLLTTALAACGDTDPTTPLPPPAADHPTGGFAGAPLRD
                     ALDRIVPALGTSPAALALGTALTAAWEFQTAASTPDIETALHALVAENPDAVVEADAI
                     RLALVIQR"
     gene            5119..5577
                     /locus_tag="VGA78_08435"
     CDS             5119..5577
                     /locus_tag="VGA78_08435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893939.1"
                     /translation="MPMLIAIVAPLLMVAATRAAPPNPPCTDPLPIDPAVVTQQMKLQ
                     GFAGATQAGPVCHLSWQGGGGPSLLIYGPTGMAGLGQKFTSARQAADQYRGESPKGVE
                     PLPGVANGYMVFDPKTPNRRLFVEFQKKIYMIVSQDQIPLAVLAKAIIQK"
     gene            5740..6327
                     /locus_tag="VGA78_08440"
     CDS             5740..6327
                     /locus_tag="VGA78_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893940.1"
                     /translation="MLALRSRLAPALIIALAACGSEVDEALGPPVSLNQGNGVDLHVE
                     GAGVVDFTAAGAGLGDFQFVAHRKTDGSVDGHFRQRRFRPDGVVDFSGVVTCVTIDPA
                     FPGRARIAGVVTENNSTSPAFLTENHEVGDDVWFRVTDAELGLDPADASTTYGFKPTL
                     VNTSEEYCALPFTGLPAWNPGSIFPLKQGTIRVKP"
     gene            6453..7055
                     /locus_tag="VGA78_08445"
     CDS             6453..7055
                     /locus_tag="VGA78_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893941.1"
                     /translation="MTGRCLACDALQLLLYGYAALDSIPRALEMTLAWTRRDPGSAKA
                     WALLGGMLDAAGRPDDAIAARRKSTPFDAYDDVFAGAVRLRAGDFPAADQTARAQLAE
                     GADYESTWQGFWLLMISLRYQARWRELHEVAERRFATATMADRTGEHGRRLRFTQALA
                     LLEAGRAPDAIRILDSLTRWIDPRLPLGGRALPLTCNTPC"
     gene            7194..7538
                     /locus_tag="VGA78_08450"
     CDS             7194..7538
                     /locus_tag="VGA78_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893942.1"
                     /translation="MHDTLGAMRAFERGIYSRTLGFTRTNYHLARHHLARGEPRRAAD
                     LLRPALQGSLESSNYYVTHTEVHQLLAEAYARLGQPDSALVHRRWIAAALAQADSGAR
                     ARLAAAPDAPSR"
     gene            7887..>8330
                     /locus_tag="VGA78_08455"
     CDS             7887..>8330
                     /locus_tag="VGA78_08455"
                     /inference="COORDINATES: protein motif:HMM:NF015441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HEX9893943.1"
                     /translation="MEGGAVVSIWRYPVKSMMGEELNATEITESGGLLGDRAYAVVDR
                     ADRKVASAKNPRKWPALFDFRASLIEPPRPGAKLPPVRITLPDGRTATSQQDDLNDIL
                     SKALDRGVTLTAVEDDHPISANAEEYWPDMAGLDHRDTVTDFTLPE"
BASE COUNT         1407 a         2801 c         2743 g         1379 t
ORIGIN      
        1 gacctcggct gccggcgccg ccgcgatcgc cctgggcccc catgccgccg ccgcgctcca
       61 ggaccaggac aagaacgcgg tcctggcact gatcccgaag cagcacgacg ctacgctcca
      121 gatgctccgc gagtggatcg ccctcccctc gatcgccgcc gaggatatcg ggtaccccca
      181 gggcgcggag tacatggcga aactggcccg ggacgccggc ttcccccagg tcgaggtcat
      241 caacaccgcc ggcaagcccg gggtgttcgc caccctcgac gtcggagcca ggaactggct
      301 cggcatctac ttcatgtacg atgtcaagca gtacgacccg gccgagtgga cctctccgcc
      361 gctcgaaggc cgcctggtcg acaagcccgg cctggggaag gtcatcgtag gccgcggcgc
      421 cacaaacacc aagggccccc agaccgcggc cctcgccgcc ctgaacgcct tcaaggccgc
      481 gggcaagaaa ccgccggtca acatcgcgct ggtctgcgaa ggcgaagaag agataggctc
      541 gcccaacttg cgcgagatcg tcttcaagcc gcaggtcgaa gcggccctcc gcaagtgcct
      601 cggcatcatc atccccctgg gcagccagtc gcccgacggc ggggtcgaag tgaacctggg
      661 cgccaaaggc gtcatcgagg cggaactggt ctcgaccggc gagaagtggg ggcgcgggcc
      721 ggccaaggac atccactcga gcctggctgc ctcggtcgac agccccgcct ggcatctggt
      781 gctggcgctc gccacgctca agaaggaaga cggcaacacc atcgcggtcg aaggcttcta
      841 cgacaagatc cgcccactca ccgctcggca aaaacagatc ctcgaggcgg cgatcgcgaa
      901 gaagaacgag gccgtcatga aacggacgct cggggtgcag aagtggattg ccgatgagtc
      961 gttccacgac gcccaggtcc ggctggtgag ccagcccacc atcaacatcg agggactggt
     1021 gggtggatac accggccccg gcggcaagac cattctgccc tacaaggcgg tggcgaaggt
     1081 cgacatccgt ctggtgccgg acatgacggc caaggagact ctggctctgc tcaagtcaca
     1141 tttggtgaag cacggcttcg gcgacatcga agtaaacatg tcgggcgggt acgatcctac
     1201 cgaaaccgat cccgactcga agctggtgca ggggatgctc gcgacctatc gccgtctggg
     1261 cgtggagccg ctcctgtggc cccgcctcgc gggctcctgg ccgggcgtga ccttcacggg
     1321 cgaaccgctc aagctggccg cgggacagtt cgggatgggg cacggcggtg gagcccatgc
     1381 gcccgacgag tattacgtga tcgaggcgag caaccccaag ctggccggtc tcgacggggc
     1441 ggtgaagtcc tacgtggagt ttctctactc gctggcgtga tgttcgatgg ggggcgggag
     1501 ctatccgacg ctagaccggc ccgcgtcgcg gcaacttcct cctattccgg cgcaaccagg
     1561 ccgccaaacg cggttcgctc agatccccat tggcgagagc gacgatggcg gtcacgacgg
     1621 ctgcttcgtc ggcgatcacc tcgagtccat tgagctccca cgggcgtgat gatggcgggt
     1681 aagtttcgtg ccggggccgt agcgcagcac cttggccgag agcgggccga gcatggggtt
     1741 gggaaagagg tcgccagagg caggaagtcg catcgccgat tcctcgatgg ttacttggat
     1801 cagggcatta gacaggccgc ccaccaggaa agttggctcc acactgccgt cagcagggag
     1861 tggcggtgcg tagccgcgag cgtaacgggc atgggaggtc gccgctgacc acactcgggc
     1921 tgattggcat cgggctggtt ctcgtgtacc ttgcgggggc ctggttcggc cagcgggtca
     1981 tgctgttccc cgccgcctgg ctcccagcgc cggtcgggaa ggcgcgggcc gaatcggtgc
     2041 agctggaacc gggtgatcag ggtcaggcac ttttcctccc tcccggtccc ggtactcccg
     2101 ccccgttccc tctcgtcatc ttcgcccacg gcaacggcga gctggcggat gactgggtcg
     2161 accagttcgg gccggtccag gcctggggct gggcggttct gctgctggag tatcccggct
     2221 acggccgagc ggctggcagg ccatcgcaag caaccatccg ccgggcgatg ctcgccgcct
     2281 acgattgggc cgcacaggag ccgcgtatcg actccacccg gatcgtggcg tacggccgct
     2341 ctctcggtgg tggagcggct gcgtatctgg cggccgggcg ccccatcacg ggattgattc
     2401 tcgagtcgtc gttcaccagc atccggccgt tggccgcaaa atacctggtg cccgggtggc
     2461 tggtgcgcga tcccttcgac aaccttctag ccttacaggg ctatcggggc ccactgctgg
     2521 tgctgcacgg tgcggccgat ggactcgtcc ccatcgagca cggtcgcgcc ctgggcgccg
     2581 ccgtatcggg ggcggaattc cacgaactgc cttgcggcca taatgattgc ccactctcct
     2641 gggacctcat tcgggccttc ctgaccaagc accaattgtt gacgccgggg caggtcgacc
     2701 gcgtgccccc caatgaacca ggcacgacaa tatcccctac cgccgttagg cagtaagagc
     2761 ccgactaact ttcgcacctc cacggtggta tcggctgtgg caaaccggcg ccacgcttgc
     2821 aaggtccgtt ccggaaaacg cggcggtggg aagcgccccg gcagcaatcc ccggggcgct
     2881 ttccgttgga gccggatcgg atcacttggg gatcaggacg cagatccact ttttgccgtt
     2941 gaagtcccag acctcgccat aatcgccggt cgccaggcag gccggaccat aacccttcgg
     3001 gcagccctgg ttgccgtcat catccacgat gagcggcttc cccgtgctgg cacccttgtt
     3061 gtactcgcag atgtagccgt tctggttgag gtcgtagctc gagtaaacgg tgctgcccga
     3121 gtaggccagg ctatagttgg ccttacagta gtacttaccg tcgtcgtcca cgaactgcgg
     3181 ccgtccgcca gccgctgcgg caatcggggg agcctgatcc ggcgcgctgg ggactccctc
     3241 ggtacacgcc agcgacaccg ccgtcgcgag ggcgaacgcc cccgggaaag agagcaaccg
     3301 aagggtgggt acgagctgca tgactgcctc ccggtaaatg gtggaatgcc ttctgctcga
     3361 atgtctgcca acgctatgct cagtattcat gcgtctcgct ccgaccgagc gacgggttcc
     3421 gctccccgtt cagggctcgt tccatcacgg cggtcaccaa ccccatcagt tctcgccact
     3481 ggtcctccag ctccggggtc gagtgggggc ccagcgtgtc gcgcagggcc tcgaacagcg
     3541 cctcggtggc gagctggtag tgctcctccc gcaccccgta gccggcatgc cggcgaccga
     3601 gcggcaccac cagcaccacc agtcgctccg gctggtcgag cgattccgcc agagcccaga
     3661 aggtgtaagc caggcggcgc tggagggccg ccggatcggt cttcgcgaag agcgccgcga
     3721 cctcggggtc gagggcgacg agacgggcat ggaaccgcgc cgcaagcaca tcggctgagg
     3781 atgcgaccag cgcccagggc ggccggacgg gtttggagag cccgccggcc acaccggaat
     3841 cgcagtcgat ggtcacgggg ctggcgccgt cacgcacagc gcggttatgg tcaaatcaat
     3901 cgagccggca taggtattgg tcaccagcac cagccacccc ggctgcactc cgattcctac
     3961 tggtccgttc gtgcgaggga tcccgtccgc tcccagcggc tcgaccgtga acccaccgcc
     4021 cacgacgacc tcgcccggct cacaggcgac cccggtcccg gtcgtcgatc cggacgaaat
     4081 gctgatcgtt gtcttccggg gctggtatct ggcgagcccg gaggtcccgg actcccagct
     4141 gaattccacg tggttctagc cgcacttgct cggtgcgcct tccactttga tgcgatacac
     4201 cgtgccgctc ttcggcacat aacacgcggt gaatgtggtt tgggcctggg ctctggccgc
     4261 cggaaacagc gcgacgatcg cgaccagcat cgaaaggcga atgcgggaca tggggttctc
     4321 cttgagtcgt gggttgatcg tgagtgaagt cattggcgcc gtcagcgttg aatcacgaga
     4381 gcgagccgga tggcgtccgc ttcgaccacg gcatccgggt tctcggctac gagcgcgtgc
     4441 agcgccgtct cgatgtccgg cgtcgacgcg gcggtctgga actcccacgc agcggtgagg
     4501 gccgtgccaa gtgcgagggc ggccgggctc gtgcccagcg ccgggacgat ccggtcgagc
     4561 gcatcgcgga ggggcgcgcc ggcgaaccca cccgttgggt ggtcggcagc cggcgggggc
     4621 aggggagtgg tgggatcggt gtcgccgcac gcggcgagcg ctgtggtaag cagtcctgcg
     4681 acaatgaacc tcatgagacc tccgatgtcg gggtaagcgc ggccggccgg ccgctctgaa
     4741 cgggacccat gataccggcc ccgtccccgg aatcgtcacg agattctcac gagcctaact
     4801 ccttggtgca gttctcctta ccggtgcggt ccgcgggccg atcaactcgg cgttagaatc
     4861 ctctccccca gcgctcccca tgatccggat cctggatgct gcggcgggag gaatctccgg
     4921 cttgcggctg ggaatcagtt ggagaaactg cgcggggatc gcgaatagcc tgccagcttg
     4981 tgacatgccg ccgggtcctc caccttcagg acgatccttt cacgcggcgg gctgtcggca
     5041 cctcctggga tttaccctcc ttcgaagcgg cgatactaag gccttaccac ctagacttgc
     5101 ctgaagggag caatcccgat gccaatgctg attgccattg tcgccccgct cctgatggtt
     5161 gcggcgaccc gggccgcgcc gccaaaccca ccctgcaccg atccgctgcc catcgatccg
     5221 gccgtggtca cgcagcagat gaaactccag ggcttcgctg gggcgaccca ggccggaccg
     5281 gtatgccatc tgagctggca gggcggcggt gggccctcgc tccttatcta cggtcccacc
     5341 ggcatggccg gcctggggca gaagttcacg tcagcgcgcc aggcggccga ccagtaccgg
     5401 ggcgaatctc ccaaaggggt ggagcccctg cccggagtgg cgaacggcta catggtcttc
     5461 gatcccaaaa cccccaatcg ccggctcttc gtcgaattcc aaaagaagat ctacatgatc
     5521 gtctcgcagg atcagattcc gctggccgtg ctggcaaagg ccatcatcca gaagtaggtc
     5581 ccggctgctc gggcgtcgcg cctcgaaagg gggggcgatc ccgctcgaaa tgttccaaag
     5641 tagaccacgt acaagaccgg aacgagccgg ttccctatcc tcgggttggt gcaggccggg
     5701 catcgcccgg ccccgacgtg ttccacccaa ggagactcta tgctcgcgct gcgtagccga
     5761 ctcgctcccg ctctgatcat cgccctcgcc gcctgcggga gcgaagtcga cgaggcgctc
     5821 ggcccacccg tcagtctgaa tcaggggaac ggagtagacc ttcatgtcga gggagccggt
     5881 gtggtcgact ttaccgcggc cggcgccgga ttgggcgact tccagtttgt tgcccaccgc
     5941 aagacagacg ggtccgtcga cggccatttc cggcagcgcc ggttccgccc cgacggggtc
     6001 gttgatttct cgggagtcgt cacctgcgtc acgattgatc ccgccttccc cggccgggcc
     6061 cgcatcgcag gcgtggtaac cgaaaacaac tcgaccagtc cggcctttct cacggagaac
     6121 cacgaggtgg gcgacgacgt ctggttccgt gtcaccgatg cggagctggg ccttgatccg
     6181 gctgacgcgt ccactaccta cggcttcaag ccgacgctgg tgaacacctc ggaggagtat
     6241 tgcgcgttgc cgttcaccgg tctgccggcg tggaacccgg ggtccatctt cccgctcaag
     6301 cagggcacga tccgggtcaa gccatagcgg cgggagcaca accagccgtc ggggggcttc
     6361 ggatcgaggg tcaccaggcg agaattggca gcgagagccg gggctcagca gggctggcgc
     6421 taacccgttg atgcggcgtc agctttggaa aggtgactgg ccgatgcctc gcgtgcgatg
     6481 cgctccagtt gctgctgtat ggctacgctg cgctcgattc gattccacgg gccctggaga
     6541 tgacgctggc ctggaccagg cgcgatcccg ggtccgcgaa ggcatgggca ctcctcgggg
     6601 ggatgctgga tgccgccggc cgccccgacg acgccatcgc ggcccgccgg aagtccaccc
     6661 cgttcgacgc ctacgatgac gtctttgccg gggccgtccg gctccgcgcc ggcgacttcc
     6721 cggccgcgga ccagacggcc cgcgctcaac tggctgaagg tgcggactac gaatccacct
     6781 ggcagggctt ctggctgctg atgatcagcc tccgctacca ggcccgctgg cgtgagctcc
     6841 acgaagtcgc cgaacggcgc tttgcgacgg ctaccatggc cgatcgtacc ggcgaacacg
     6901 gaaggcgtct gcggttcacc caggccctgg cgctgttgga ggccggccgg gccccggacg
     6961 cgatccggat ccttgattcc ctgacccgct ggatcgatcc gcggctgccg ttaggcggcc
     7021 gcgcgctccc gctcacgtgc aatacaccat gttagccgag gcggccctgg gcggcaggcg
     7081 atccggggct ggtctcgcac gccgctgatt cggccgaggc gtgggctcgg cggagtggca
     7141 agatccggga gcgcggcatc gcgaaccacg cccgggccct ggtccacctc gccgtgcacg
     7201 acacgctggg agccatgcgg gccttcgagc gggggatcta ctctcgcacc ctgggattca
     7261 cccgcaccaa ctaccacctg gcgcgacatc acctggcccg gggcgaaccg cggagggcgg
     7321 ccgacctgct tcggccggcc ctgcaaggct ccctcgaaag cagcaactat tacgtgaccc
     7381 acacggaggt gcaccagctc ctggccgaag cgtacgcccg gcttggccag cccgacagtg
     7441 ccctcgtcca ccggcggtgg attgccgcgg ccctggccca ggccgactcg ggcgcgcggg
     7501 caaggctggc cgccgctccc gacgctccta gccgctagcc cgcggcaagg gtggctcacc
     7561 ggccccatcg atggcggtga tctccacccg atgcaacccg agcggattgg gccggtccgg
     7621 ggagcgggtg ctgaagacac cttcttccgt tctgtaccgg gcacggcgcc taaccggagt
     7681 caggcaatga cccaaggcaa ttctgcgccc tctggcgcca tgtcctttca ggggcgcatg
     7741 ggagctgacg ggggccggag cggggcggca gccagccggg tatgttccct tgcggggccg
     7801 ggcggctgcc gtcgcacgcc ccccggcagc tcaatgctgg ccgttaggcg gaatcgtgcg
     7861 gaggtactct gccaagccca tcgcagatcg agggtggagc ggtcgtctcc atctggcgct
     7921 atcccgtcaa gtcgatgatg ggtgaggagc tgaacgccac tgagattaca gaaagcggcg
     7981 gcctgctcgg agaccgtgcc tacgctgtgg tggatcgcgc ggaccggaag gtcgccagcg
     8041 cgaaaaaccc ccgcaaatgg ccggccctgt ttgactttcg agcgagcctt atcgagcctc
     8101 cacgccccgg cgccaagctc cctccggttc gcattacgct gccagacggc aggaccgcca
     8161 ccagtcagca ggatgaccta aacgacattc tctccaaggc actcgaccgc ggcgtgacat
     8221 tgacggccgt tgaagatgac catccaatct cagccaatgc tgaggagtac tggccggaca
     8281 tggcaggcct cgatcatcgg gacaccgtga ctgacttcac actacctgag
//
LOCUS       DASWKS010000294         7822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_141619, whole genome shotgun sequence.
ACCESSION   DASWKS010000294 DASWKS010000000
VERSION     DASWKS010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7822
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141619"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..588
                     /locus_tag="VGA78_08460"
     CDS             181..588
                     /locus_tag="VGA78_08460"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX9893944.1"
                     /translation="MAGGGGGARGEVSSEPNVIPMIDIMLVLLIIFMISQPLSRQVIE
                     AQVPPPETAVASTAPSTQIVLELTADGGYAINSQVVPRDQLDTQIHAIYDNRPAKLLF
                     LKSAPDRIYQEVIEAMDIARGAGVQVIGFTPKV"
     gene            700..1464
                     /locus_tag="VGA78_08465"
     CDS             700..1464
                     /locus_tag="VGA78_08465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893945.1"
                     /translation="MPDRPSPPAVLLPKPRRSPWGGIGSVLLHALFIGAIVLANWREV
                     LSWSPVTQMGDPAATKGGGGGGGSIREVALPALERPAAPPALVPPPPPPPQPTPEPTP
                     VVVEPPPPEPVVAVTAAADSAPKVSTGQGGPGSGGGKGTGTGPGQGSGTGPGSGSGSG
                     PGTGGDAGRGIPPEPRQLILPPLDYPRSMRGRTIAVTFWVGSDGRVERVALDPQIDDG
                     GFARKFSDVMRQYRFRPARSPAGAAIPGTTTVSVTF"
     gene            1517..3043
                     /locus_tag="VGA78_08470"
     CDS             1517..3043
                     /locus_tag="VGA78_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX9893946.1"
                     /translation="MSQLWRRKSIADYESDLRERSGLRRSLNKWHLTALGVGATIGAG
                     IFATTGTAIVGDAARPGAGPAIVLSFLLTAIACGFAALCYAEFASMVPVSGSAYTYAY
                     ASLGELVAWIIGWDLIIEYAVGNIGVAIGWSGHFRELLGYLGLHLPAWLATDVRTATD
                     AANAVAQGSTDASLQYLASALTAAPQVLGVPFIANLPAFLVVLTLTVILVIGIRESAN
                     TNNAMVILKIGIILFFIAIGVFLIRPANWTDPAQGGFAPNGVSGISAGAAIIFFSYIG
                     FDAVSTAAEEAENPAKDMPFGIIMSLVICTVLYIALSLVMTGMAPWRTLGTAEPMLTA
                     LSHAEGPPGLINFSRFIIALGAVVAMGSVLLVFQLGQPRIFFSMARDGLLPPFIAKVH
                     PKYRTPWVGTIITGVFVASFAAFANIAEVVDLTNIGTLFAFVLVSLGVVVLRVKEPDR
                     HRPFRVPGAPVTPFISVVACLYLMLQLPRITWIRFGLWLLAGLLIYYLYGMRRSRLRI
                     "
     gene            complement(3173..4054)
                     /locus_tag="VGA78_08475"
     CDS             complement(3173..4054)
                     /locus_tag="VGA78_08475"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HEX9893947.1"
                     /translation="MSILVGVDAGGTKTVAAVAREGKELARETGPAGTVRPGRVLASA
                     TAISSTVRQALARISEIRADRLVVGAAGVGREEERNALHAALRAEGLAPQVRITTDIE
                     IALEDGFSKGPGIVLLAGTGSFAIGRHGDGSLHRQGGYGWQMSDEGSGYALGRSALHA
                     VGRARDGRGPATELTAAVLRTARSQHFDELVRWSVTALPTEVAGLATAVLEVAREGDA
                     VAEGLLQQAVRDLVSLVTPLLPGFQGNLPEVAIAGGLLDNEPLRTLAREALRAQGVKM
                     MERTLDPVTGALALARE"
     gene            complement(4051..5526)
                     /locus_tag="VGA78_08480"
     CDS             complement(4051..5526)
                     /locus_tag="VGA78_08480"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEX9893948.1"
                     /translation="MASFDLTVIALYLLATLGLGLWLARRQTSSADYFLGARDLPAWS
                     VLLSIVATETSALTVVSIPGVGARGDLTFLQLTFGYLVGRIAVAAWLLPGYFRGQQET
                     AYQRLETRFGPGTRRMVSATFLITRFLGDGVRIFAGAIPLALVTGWSVSAAIVVMGVV
                     TLIYTWLGGLKAVVWADVIQLLVYVGGGIVALLLAWSMAGGAEAALARASEAGKLRLL
                     NPALNLTDTYSFAGGLVGGAMLSAASHGTDHLIVQRLLATRSLRDARIALVGSGVVVI
                     FQFLLFLLVGSAIWAAGLAPEGMLPDAIFPSFIVHQMPAGVRGLLIAGILAAAMSTIS
                     SSINALASSVTYDFYAGSTGRTDPAHLLRLGRIVTVLWGVALTGGALVLTGLVTRMDT
                     PVVVLALSIASITYGALLGTYILAARWHRAEGRDVVIAAASAMLVMLLVVFARSLVAW
                     GVAPWLAPFGRLAWPWYVPLGTTLTILVGVASSLLRPRTSA"
     gene            complement(5666..6019)
                     /locus_tag="VGA78_08485"
     CDS             complement(5666..6019)
                     /locus_tag="VGA78_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX9893949.1"
                     /translation="MSVETTGIQVILTDQAVAEVRKFMEADQVPTDTAGLRVGVLPGG
                     CSGFKYSLNIEEASQEDDIIVESSGIRVFVDGFSLQYLNGVTIDFVTSMQGSGFTFTN
                     PNATGGCGCGTSFTA"
     gene            complement(6121..7341)
                     /locus_tag="VGA78_08490"
     CDS             complement(6121..7341)
                     /locus_tag="VGA78_08490"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9893950.1"
                     /translation="MRRLALALSAVLMLGAGSGLAQQPVRPSDRPSASPSDRPSASPS
                     ARPSVLDWRPLARLLDSAVANGAAPGGVIAVSVGGVRYLHGAGRLGLEDSTRPGPGTM
                     YDLASLTKVIGLTTGIMLAVSEERLALDAPVQRYLPRFAGRFKEQVTVRHLLTHSSGL
                     PDHRRLWVETPDRGSALALVDSTPLDTVPGARMVYSDLGAMVLTQVLEGIYGMRIDSL
                     LEQRVFGPLGLQSTRYLPPREWLPHIAPTEHDPWRGRMLHGEVHDENAAWLGGVSGHA
                     GLFSTAEDLLAFGEWALGNVNGECRRLPVLPSIVREFVRRQDLVPGSSRALGWDTPSP
                     NSSAGTKLSPLSFGHTGFTGTSIWMDPTRRLVVLLLTNRVHPTRENNRLGPLRRSVAD
                     VVAGIVDVSNLVDM"
     gene            complement(7338..>7822)
                     /locus_tag="VGA78_08495"
     CDS             complement(7338..>7822)
                     /locus_tag="VGA78_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893951.1"
                     /translation="PGTGLAAGLGTRGHLVSISRLLPASGPASYDSARAAAAAADLTL
                     FAVAVRAREGAGSIAMPLSLAELINGAGVRAMLVSFGSPYIITQVPEVSSFLIAWTVT
                     SHSESAVAAALHGAPVTGRLPIEIPPRYRIGDGLMAGGRQRTDGRQTDRRTDGRTDGR
                     "
BASE COUNT         1320 a         2708 c         2533 g         1261 t
ORIGIN      
        1 cgccccgaga acaaagttct gtacttccgg gccgaccaga atctcaagtt ctccaagatt
       61 caggaagcgg tggagatcgc ccggcgttcc ggcgttcggg tgctcgcggc ggtgactgag
      121 cccgaggcca ccggcggcgg cctgttcgac aaaccgaagc agtagggagg gggcgagcgt
      181 atggctggtg gaggcggtgg agcgcggggt gaggtcagtt ccgaacccaa cgtgatcccg
      241 atgatcgaca tcatgctcgt gctgctgatc atcttcatga tctcgcagcc gttgtcccgg
      301 caggtgatcg aggcgcaggt cccacccccc gaaacggcgg tggcgtccac tgcgccgagc
      361 actcagatcg tgctggagct gaccgccgat ggcggctatg ccatcaactc gcaggtggtg
      421 cccagagacc agctggacac gcagatccat gcgatctacg ataaccggcc ggccaagttg
      481 ctgtttctca agtccgcgcc cgatcggatt tatcaggaag tgatcgaggc gatggacatt
      541 gcccgcggcg ccggagtcca ggtcatcggg ttcactccca aggtctgaac cggtcggcag
      601 ggcggggcgg ggcgcggaac cttcgggggc cgcgccccgt actcgttggg ggtcagccgt
      661 cgaagaccag agtcgcgaga gtctatcttt cagaggccaa tgccggaccg tccttcacct
      721 cccgccgtac tgctgcccaa gccgcgccgt tcgccttggg gtgggatcgg gtctgttctg
      781 ctgcatgccc tgtttatcgg cgctattgtg ctggccaact ggcgggaagt tctgtcctgg
      841 tctcccgtta cgcagatggg ggatcccgcc gccaccaagg gaggcggtgg gggcggagga
      901 tccattcgcg aggtcgccct cccggcgctg gaacggcccg cggctccccc ggccctggtc
      961 ccgccgcctc ccccgccgcc gcagccgacg cccgagccca ccccggtcgt cgtggagccc
     1021 ccaccccccg agcccgtcgt tgccgttacc gccgccgccg actcggcgcc gaaagtctca
     1081 accggacagg ggggtccggg cagcgggggc gggaagggca ccggtaccgg cccgggacag
     1141 ggcagcggga ctggtcccgg ttccggcagt ggcagcggcc cgggcaccgg cggcgatgcc
     1201 ggacgtggaa tcccgcctga gccgcggcag ctgatcctcc ctccgctgga ttatccgagg
     1261 tcgatgcgag gccgcaccat cgcggtgacc ttctgggtcg gatcggacgg tcgggtcgag
     1321 cgggtggcgc tggatccgca gatcgacgat gggggtttcg ccaggaaatt ctccgacgtc
     1381 atgcgtcaat accgcttccg gccggcgcgg tctccggcag gcgccgcgat ccccggcacc
     1441 accacggtca gcgtgacttt ctgatcccac atccggagtc gaatatggac gatcccgcac
     1501 ccgcagtccg ggccgcatga gccagctctg gcgtcgaaag tcaatcgccg actacgaaag
     1561 cgaccttcgg gaacgcagcg ggctccggcg ctcgctcaac aagtggcatc tgacggcgct
     1621 gggagtgggc gccaccatcg gcgccggcat ttttgcgacc accggaacgg ccatcgtggg
     1681 agatgccgcc cgtccgggag ctggccccgc gatcgtcctg tcgttcctgc tgacggcgat
     1741 cgcctgcggc tttgccgcgc tgtgttacgc cgagttcgcg tcgatggtgc cggtgtcggg
     1801 atcggcctac acctatgcct acgcctcgct gggcgagctg gtggcgtgga tcatcggctg
     1861 ggacctgatc atcgagtacg cagtcgggaa tatcggcgtg gccatcggat ggtccggcca
     1921 cttccgggag ctgctggggt acctgggcct gcatctcccg gcctggctgg ccaccgacgt
     1981 gcggaccgcc accgacgccg ccaacgcggt ggcgcagggc tcgaccgacg cgagcctgca
     2041 gtacctggcc tcggcgctca ccgccgcgcc ccaggtattg ggggtgccgt tcatcgccaa
     2101 tctgccggcg tttctggtgg tgctgacgct gaccgtcatc ctggtcatcg ggatccgcga
     2161 gtccgccaat accaataacg cgatggtgat cctcaagatc gggatcatcc tgttcttcat
     2221 cgccatcgga gtcttcctga tccgccccgc caactggacc gatccggcgc agggtgggtt
     2281 cgcgccgaac ggcgtctcgg gcatcagcgc cggcgccgcc atcatcttct tcagctacat
     2341 cggatttgac gcggtatcga ccgcggccga ggaggcggag aacccggcca aggacatgcc
     2401 tttcggcatc atcatgagcc tggtcatctg taccgtgctc tacatcgccc tgtccctggt
     2461 gatgaccggc atggccccgt ggcggaccct gggcaccgcg gagccgatgc tgaccgcgct
     2521 gagccacgcc gaggggccgc ccgggctgat caacttctcc cgcttcatca tcgcgctggg
     2581 cgcggtggtg gcgatgggga gcgtgctgct ggtgttccag ctgggccagc cgcgcatctt
     2641 cttctcgatg gcccgggacg ggctgctgcc gcccttcatc gcgaaagtgc atcccaagta
     2701 ccggacaccg tgggtgggca ccatcatcac cggcgtgttc gtcgccagct tcgcggcttt
     2761 cgccaacatc gccgaagtgg tcgacctcac caacatcggg actctgtttg ccttcgtcct
     2821 ggtgtcgctc ggcgtcgtgg tgctgcgggt gaaggaaccg gaccggcatc gcccgttccg
     2881 ggtgccgggc gcgccggtca cccccttcat ctcggtggtg gcctgcctct acctgatgct
     2941 gcagctaccc aggattacct ggattcggtt tggtctctgg ctgttggccg ggctgctgat
     3001 ctattacctg tatgggatgc ggaggagccg gctgcggatc tgaccgcagg gagcggggag
     3061 caggaagcag gaagcaggaa gcagggagca ggaggagaga cgataagccc cggctggagt
     3121 cgtcccccgc ctccccgctc cctgctccct gctccctgct ccctgctctt ggttattccc
     3181 tggcgagagc cagggctccc gtcactggat ccagggtccg ttccatcatc ttcacgccct
     3241 gtgctcgcaa cgcctcccgc gccagggtgc ggagcggctc gttgtccagc agtccgccgg
     3301 cgatggccac ctcagggagg tttccttgga atcccggcag gagcggcgtc accagactta
     3361 ccagatcccg caccgcctgc tggagcaacc cctcagcgac cgcatcgcct tcgcgggcca
     3421 cctccagcac ggccgtggcg agtcccgcga cttcggtcgg caaggcggtc accgaccacc
     3481 gcaccagctc gtcgaagtgc tgcgaccggg ccgtcctcag gacggcagcg gtgagctcgg
     3541 tcgcgggccc ccgtccatcc cgggctcgac ccacggcgtg cagcgcggag cggcccagag
     3601 catagccgct gccctcgtcg ctcatctgcc agccgtagcc gccctggcgg tgcagcgagc
     3661 catccccgtg ccgtccgata gcaaagctgc cggtgccggc gagcagcacg atccccggcc
     3721 ccttgctgaa cccgtcctcc agcgcgatct cgatgtcggt ggtgatgcgg acctggggag
     3781 ccagcccttc cgctctgagg gccgcatgca gcgcgttccg ctcttcctcg cgccccaccc
     3841 cggccgcgcc caccaccagc cggtcggctc tgatttcgct gatccgcgcc agcgcttgcc
     3901 ggaccgtgct cgagatggcg gtcgccgatg ccagcacccg gcctggacgg accgtcccgg
     3961 cgggaccggt ttcgcgcgcc agttctttgc cttcgcgcgc cacggccgcc acggtcttgg
     4021 tcccgccggc gtccactccc acgagtatgc tcatgcgctg gtcctgggtc ggagaagact
     4081 ggatgccact cccacgagga tggtcagcgt cgtgcccagg ggaacatacc agggccatgc
     4141 cagacgcccg aacggcgcca gccatggtgc caccccccac gcgaccagcg atcgcgcgaa
     4201 gaccaccagc agcatcacca gcatggcgct tgctgccgcg atcacgacgt cccgtccctc
     4261 ggcccgatgc caccgcgccg ccaggatgta ggttcccaag agggcgccgt aggtgatgga
     4321 cgcgatcgag agcgccagca ccactaccgg cgtatccatt cgcgtcacca ggccggtcag
     4381 aaccagcgcg cccccggtga gcgcgacacc ccagagcacc gtgacgatcc ggcccaggcg
     4441 cagcaaatgg gccggatcgg tgcggccggt gctcccggca tagaaatcgt aggtgacgga
     4501 cgacgccagc gcattgatcg aggagctgat ggtgctcatg gcggcggcca ggattccggc
     4561 gatcagcagg ccccgcaccc cggcgggcat ctggtgcacg atgaagctgg ggaagatcgc
     4621 gtccggcagc atgccctcag gtgccagacc cgcggcccag atcgccgatc ccaccagcag
     4681 gaacagcagg aactgaaaga tgaccaccac gcccgagccg accagggcga tccgcgcatc
     4741 ccggagcgag cgggtggcca gcagccgctg tacgatgaga tgatcggtgc cgtgagaggc
     4801 cgcagacagc atggcgccgc ccaccaggcc gccggcgaag ctgtaggtat cggtgagatt
     4861 cagcgccggg ttgaggagcc gcagcttgcc ggcttcggac gctcgcgcca gcgccgcctc
     4921 ggctccgccc gccatcgacc aggcgagcag cagcgctacg ataccgccgc ccacatacac
     4981 taacagctgg atcacatcgg cccacaccac ggccttgaga ccacccagcc aggtgtagat
     5041 caacgtgacc acacccatga ccacgatcgc ggccgacacg ctccagccgg tgaccagtgc
     5101 caacggaata gcgcctgcga aaatccgtac tccgtcaccc aggaatcggg tgatcaggaa
     5161 ggtggccgat accatccgac gggttccggg accgaatcga gtctcgagcc gctggtaagc
     5221 cgtttcctgc tgtccccgga agtaccccgg cagcagccag gccgcgaccg cgatgcggcc
     5281 caccaggtac ccgaacgtga gctgcaggaa cgtcaggtcg cctcgggcgc ccacacccgg
     5341 aatcgagacc accgtgaggg cggacgtttc ggtcgcgacg atggagagca gcaccgacca
     5401 ggccggaaga tcgcgcgcgc ccaggaaata atcggccgac gacgtctgcc gccgcgcaag
     5461 ccacagaccc agccccaggg tggcgaggag gtacagcgcg atgacggtga ggtcgaagga
     5521 cgccatctag gcggactggc ggacagacgg acggacggac gggcggacgg acggtttctg
     5581 catggttggc atcaaactaa acaagggcgg ctgagttagc cgcccttgcc accccgaccg
     5641 tccgtcggcc cgtccgtctg tccgtctatg ctgtaaacga agtgccgcag ccgcaaccgc
     5701 cggtcgcgtt ggggttggtg aacgtgaagc ccgagccctg catcgaggtc acgaagtcga
     5761 tcgtcacgcc attcaggtac tggaggctga agccgtccac gaatacccgg atgccgctcg
     5821 attcaacgat gatgtcatcc tcctgcgaag cctcttcgat gttcaggctg tacttgaatc
     5881 ccgaacagcc gcccggcagc acccccaccc ggagcccggc ggtatcggtc gggacctggt
     5941 cggcctccat gaacttccgg acctcggcca cggcctggtc ggtcaggatg acctggatac
     6001 cggtggtttc aacgctcatg tctatcctca gctctcggtc gtcagccttc tggtggccag
     6061 ctccagccaa atctgtgccg gctacctgca gttcaagctt aaagttagat gaacccaccc
     6121 tcacatgtca acgagatttg atacgtccac aattccagcc accacgtccg ccacagacct
     6181 tctgaggggt ccaagccggt tgttctcccg ggtcggatgc acccggttgg tcaacaacag
     6241 caccaccagg cgccgggtcg gatccatcca gatggaggtt ccggtgaacc ccgtatgtcc
     6301 aaagctcagg ggcgacagtt tggttcccgc gctggaattg ggggaaggag tatcccatcc
     6361 cagggcccgg ctggacccag ggacgagatc ctgtcgccgg acgaactccc taactatgga
     6421 aggaagaacc gggagccgcc tgcattctcc attcacgttc cccaacgccc attctccaaa
     6481 ggccagcagg tcctccgcag tgctgaacaa ccccgcatgg ccggacacgc cgccgagcca
     6541 cgccgcgttc tcgtcgtgta cttcaccatg cagcatccgc ccccgccacg gatcatgctc
     6601 ggtgggggcg atgtgcggca gccattcccg gggcgggagg tagcgggtgg attgaagtcc
     6661 caagggaccg aacacccgct gttccaacag ggagtcgatc cgcatcccat agatcccttc
     6721 cagcacctgg gtcagcacca tggcgcccag gtcggagtag accatgcggg cccccggtac
     6781 cgtgtcgagc ggagtggaat ccaccaacgc gagggcggac ccgcggtctg gtgtttcgac
     6841 ccacaagcga cggtgatcgg gcaacccact cgaatgggtg agtagatgcc ggacggtgac
     6901 ctgttccttg aaccgcccgg cgaagcgggg caggtaacgc tgcaccggag catccagcgc
     6961 cagacgctcc tcgctcaccg ccagcatgat tccggtggta agcccgatga ccttggtcag
     7021 cgatgccagg tcatacatcg tgccgggacc agggcgggtc gagtcttcca gaccgaggcg
     7081 tccggcgccg tgcaggtatc gcactcctcc cacgctgacg gcgatcaccc caccgggggc
     7141 ggccccgttc gccaccgccg agtccaacaa ccgtgccagc gggcgccaat ccagaacgga
     7201 cggacgggcg gacggactag cggacggacg gtcggacgga ctggcggacg gacggtcgga
     7261 cggtcggacg ggctgttgcg ccaatcccga cccagctccg agcatcagaa ccgcgctgag
     7321 agcaagagcc agtcgcctca tctaccgtcc gtccgcccgt cggtccgtct gtccgtctgt
     7381 cgtccgtccg tccgttgtcg accacccgcc atcagtccgt ccccgattcg ataccggggc
     7441 ggaatctcaa tcgggagccg gccggtcact ggtgcgccgt gcagcgcggc cgccacggcc
     7501 gactccgagt ggctggtgac ggtccaggcg atcagaaagg agctgacttc cgggacctgg
     7561 gtgatgatgt agggcgaacc gaacgacacc agcatggcac gaacgccggc tccattgatc
     7621 agctcggcca gcgatagagg catcgcgata ctccccgctc cttctctggc ccgcaccgcc
     7681 acggcaaaga gggtgaggtc ggccgccgcc gccgcggccc gcgccgagtc gtaactcgcc
     7741 ggtccactgg caggcagcag ccggctgatc gacaccagat gtcccctggt cccgagcccc
     7801 gcggccaacc cggtgccggg cg
//
LOCUS       DASWKS010000295         2262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2014990, whole genome shotgun sequence.
ACCESSION   DASWKS010000295 DASWKS010000000
VERSION     DASWKS010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2014990"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1314)
                     /locus_tag="VGA78_08500"
     CDS             complement(<1..1314)
                     /locus_tag="VGA78_08500"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9893952.1"
                     /translation="MSSLVFFTLAISLQGLAANDSLLRIRVMTGLRPVAGAVVATPDT
                     SAATDQSGLVFLRLPPGRWRLAISAVGFRPDTVELEVPHPDELVITLERVEELEELSV
                     SATRTNRRIADEPSRVEILAREEIEEKLLMTPGDIQMLLNESSGLRVQSTSPSLGGAN
                     LRMQGLRGRYTQILLDGLPLAGAQTGSLGLLQIPPMDLGKVEVVKGIASSFYGGSALG
                     GVVNLVSRAPEGRELLVNQTTLDGSDAVGWMGGPLGGLWRGSLLVGAHRQSRRDRDGD
                     GWTDVPGYRRLVARPRLVLADQTGRSLYLTSGLTLEAREGGTLPGSSAPDGAPYPESL
                     DSRRVDLGLNARLPHGPAVWTVRAALVSQHHDRLLGPVRERDDRTNGFAEAAVTLPAG
                     PGALVLGASLEVDRFRGQDVTGFDYQFSIPALIAQYDWNPAPQLGI"
     gene            1463..1903
                     /locus_tag="VGA78_08505"
     CDS             1463..1903
                     /locus_tag="VGA78_08505"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9893953.1"
                     /translation="MSVGRICSRIVVTATPGESVRAGARRMAEHGVGTLVILSADGAN
                     RAIGFVTDRDITLRCVAGNLDPDHTPLSGVMSHPVRSVHEDTPIEEAILEMSRGAIRR
                     LVVTGAEDRPVGILSLDDVLDLLIGEFGPVRKLLERQAPELLTM"
     gene            1944..>2262
                     /locus_tag="VGA78_08510"
     CDS             1944..>2262
                     /locus_tag="VGA78_08510"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9893954.1"
                     /translation="MNESVGFKSVLVPLDGSELAEQALPVGASLAGKAGVPLHLVSVQ
                     EPFTSLPYAVEFPAAALEIREELRGRLSEYLTRVTSTAQADGAPVVRTAVLDGMVAQR
                     LAEY"
BASE COUNT          375 a          760 c          759 g          368 t
ORIGIN      
        1 gatgcctaac tgtggggcgg gattccagtc gtactgggcg atcagtgccg gaatgctgaa
       61 ttggtagtcg aagccggtca cgtcttggcc ccggaaccgg tcgacctcca gagaagcgcc
      121 cagcaccagg gcacctgggc cggccgggag cgtgaccgcc gcctcggcga acccgttggt
      181 gcggtcgtcc cgctctcgta ccggtcccag gagccggtca tggtgctgcg agaccagggc
      241 cgcgcgaacg gtccacaccg ccgggccatg cggcaggcgg gcgttcaagc ctagatcgac
      301 ccgtcgcgag tcgagggact cgggataggg tgcgccgtcc ggagcggagg agcccggcag
      361 cgtcccacct tcacgggcct cgagcgtgag gccggacgtg aggtacagcg atcgaccggt
      421 ttggtcggcc agcaccagtc gcggtcgggc caccaggcgc cggtagccgg ggacgtcggt
      481 ccagccgtcg ccgtcccgat cccggcgcga ttgccggtgc gctccaacca ggagcgaccc
      541 gcgccacaat ccgccgaggg ggccgcccat ccagccgacg gcatcgctgc cgtcgagtgt
      601 ggtctggttc accagcagct cgcggccctc gggtgcccgt gagactagat tgaccacgcc
      661 gcccagggcc gagcccccat aaaacgacga cgcgatcccc ttgaccacct ccactttacc
      721 gaggtccatc ggggggattt gcagcagccc cagcgatccg gtctgcgccc cggccagggg
      781 cagaccatcc aggagtatct gggtgtatcg accacgcagt ccctgcattc ggaggttggc
      841 gccccccagc gaaggggagg tgctttgaac ccggagaccg ctcgattcgt tgagcagcat
      901 ctggatatca cccggcgtca tgagcagctt ttcctcgatc tcctcccgcg cgagtatctc
      961 aactcggctc ggttcgtccg caattcgccg attggtgcgg gtcgccgaaa cgctgagctc
     1021 ttccagctcc tccacccgct ccagtgtgat caccagctca tccgggtggg gaacctccag
     1081 ctcgactgtg tcggggcgaa agccgaccgc agaaatcgcc aggcgccatc ggccgggcgg
     1141 cagcctgaga aacaccagcc cgctttggtc cgttgcagca ctggtatccg gggtcgcgac
     1201 gacggccccg gccaccggcc ggagccctgt catgacccgg attcgaagca aggagtcgtt
     1261 cgccgccagg ccctgaagcg aaatcgccag cgtgaaaaag acgaggctcg acacagcggg
     1321 cgaagataca cccgtggcgg cctggttgat gcggtcgcct cgcgcaggac cttttcaccc
     1381 tcctttcacg acccacacat accgaccctg cgaaattgtg ttggcgcgca tcctgccatg
     1441 aagcgaacca ggggaggcac ctatgtcagt gggacgcatc tgcagtcgga tcgtcgtgac
     1501 ggccaccccc ggcgagtcgg tccgggccgg cgcgcgtcgg atggccgagc acggggtcgg
     1561 gacactcgtc attctctccg ccgacggcgc gaatcgagcc atcgggtttg tcaccgaccg
     1621 tgacatcacc ctccggtgtg tcgcaggcaa cctcgatccc gatcacacgc cgctctccgg
     1681 ggtgatgtcg cacccggtgc ggtcggtcca cgaggatacc ccgatcgaag aggcgattct
     1741 ggagatgtcg cgtggggcca tccggcggct ggtcgtgacc ggcgccgaag accgcccggt
     1801 cgggatcctg agtttggatg acgtcctcga tctgctgatc ggggagttcg gtccggtccg
     1861 caagctgctc gagcggcagg cgccggagct cctcaccatg tgagctggca gcccgcttgg
     1921 gcggaacatt cctggaggga cccatgaacg agtcggttgg gttcaaatcg gtactggtgc
     1981 cactggacgg ttctgaactg gcggaacagg cactgccggt cggggcatca ctggccggga
     2041 aggccggggt tccgttgcac ctggtctcgg tccaggagcc gttcacctcc ctgccgtacg
     2101 ccgtcgagtt tcccgccgcc gccctggaga tccgggaaga acttcgcggg cggctatcgg
     2161 agtacctgac gcgggtcacc tcgactgccc aggccgacgg ggcaccggtc gtcagaaccg
     2221 cggtgctcga cgggatggtc gcgcagcgac tggcggagta ca
//
LOCUS       DASWKS010000296         4890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_528570, whole genome shotgun sequence.
ACCESSION   DASWKS010000296 DASWKS010000000
VERSION     DASWKS010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4890
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_528570"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VGA78_08515"
     CDS             complement(<1..326)
                     /locus_tag="VGA78_08515"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893955.1"
                     /translation="MPSRAPRIFISAGEPSGDQHAARVAEALRRRWPDATIDAFGGPA
                     LRAAGATVRFPMEAYTVIGFFEVLAKLPAHIRLYRSVVRDFRAGRYDLLVAVDYPGFN
                     IRLAEAA"
     gene            complement(326..1303)
                     /locus_tag="VGA78_08520"
     CDS             complement(326..1303)
                     /locus_tag="VGA78_08520"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9893956.1"
                     /translation="MRARLPVGVIGVGALGRHHARHLASFHGVDLVGVHDLDTPRALS
                     VAAETGCAAFNDVDDLLQRVQAVTVAVPTPAHVDVGIRALEAGVPVLMEKPLAASLEE
                     ADQLIDTADRTGLQLQVGHIERFNRAIRAAQQHFGDIRYFESTRLAPFQPRGTDVAVV
                     LDLMIHDLDLVLHLTGGAEVLDVRASGVAVLTPFLDLATARVEFANGAVAMVTSSRMA
                     RERTRKLRMFQSNGYFSLDLAAGNGDFMRIRPSWIPGTGTSLQEIVEHVPLAAPQADA
                     LALELASFVHAVRGHRDTVVSGPEGRAALALALRVTAAVESAPVARPVG"
     gene            complement(1300..2076)
                     /gene="lpxA"
                     /locus_tag="VGA78_08525"
     CDS             complement(1300..2076)
                     /gene="lpxA"
                     /locus_tag="VGA78_08525"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEX9893957.1"
                     /translation="MKPGIHATAIVDPGACLGHDVEVGPFAIIGPDVTVGDRCRILAR
                     ATLERNVRLGTEVTVGIGSILGGEPQDLKFGGEETWVDVGDRTRIREYATINRGTSAS
                     GATRVGADCFIMSYVHLAHDCHVGDGVIIANGTQLAGHVTIQDRAILSGLVAVHQFVT
                     IGPMAFVGGMSRVNQDIPPFVKAVGNPVELYGLNTVGLRRANYPAETVTALKRAYRLF
                     FNSDLNLSQAQERARQELPSLPEVGLLLEFVATSQRGIPA"
     gene            complement(2073..3341)
                     /locus_tag="VGA78_08530"
     CDS             complement(2073..3341)
                     /locus_tag="VGA78_08530"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP
                     dehydratase"
                     /protein_id="HEX9893958.1"
                     /translation="MPRRTLAKTESVQGVGLHTGVCTTVTAGPAPSEHGIVFRRRDLP
                     GQPEIPARVDEVEATERRTAIGHGESTIHTVEHLLAAVVASGLDDVVLELDGPEPPIL
                     DGSFLPWMELLDRAGVAEQAGEPTWIDVPAAFTLSEGDSSYVVAPAKSLRVTATIEWD
                     HPVIGRQAGTYDINPADFRRELARARTFGFTREVEALRAQGLLKGASTASAVALSDSG
                     VIGTELRWADEFVRHKAGDIVGDLALAGGRVRAHVIATRPSHRGNVSVARAIARAGRR
                     STVALDIGRNLNIMPHRYPMLLVDRIVEIIGNQRVVGIKNVTINEPFMQGHFPGHPIM
                     PGVLIIEAMAQTGGFLLMGTVDRPENKVVYFMSIDNVKFRRPVVPGDQLRSELEMIQH
                     RGRTCRMRGTAWVDGNLVAEAEFMARVVDR"
     gene            complement(3334..4368)
                     /gene="lpxD"
                     /locus_tag="VGA78_08535"
     CDS             complement(3334..4368)
                     /gene="lpxD"
                     /locus_tag="VGA78_08535"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEX9893959.1"
                     /translation="MEPGALTPRAVAELIGGRLVGDGSVHLTGFAPLDRAGPADLSFL
                     SSGKYLDAFRASQAGCVLVADDLAGAAGGPAVRIVVRDPARAMGQVLAHLHPEAPPAP
                     GIDPTARLGAGVILGREVSIAPYAVIGAGVRLGDRVVIGSGTVIEDQVEIGNDSVLGP
                     RVVCCSGTRLGCRVRVKAGAVLGGRGFGYAPGEGGLERLPHVGRCLIEDDVDIGANTC
                     IDRGSIDDTVIGAGTKIDNLVQLGHNVRIGRRCLLMSQVGVAGSARIGDGVILAGQVG
                     VVGHLSIGAGARVAAQSGVGNDIPAGADYGGSPARPHREWLRSHAVLYRLAPLAKNLE
                     ALVKERNAHA"
     gene            complement(4376..>4890)
                     /locus_tag="VGA78_08540"
     CDS             complement(4376..>4890)
                     /locus_tag="VGA78_08540"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEX9893960.1"
                     /translation="GAALGIGPAAAQQPQQASGAPAKIAFVNARSALQAMPGYAKAES
                     TFVKEGEATQGELRRLQAQLDSALAQFQQQEPMLSATNRATRRKELETKNEQLQTRAR
                     DLQQKLALRERELLQPMQERLTAIIEGIRAESNFAMIIDLGAQGLGIVTYDKSLDITP
                     RVIQRLRQTN"
BASE COUNT          749 a         1728 c         1685 g          728 t
ORIGIN      
        1 gccgcttcgg ccagccggat gttgaacccg ggatagtcga ccgcgaccag cagatcgtag
       61 cggccggcgc ggaaatcccg gaccacgctc cggtagagcc ggatgtgggc cggaagcttg
      121 gccagcacct cgaagaaccc gatgacggtg taggcttcca tgggaaagcg aaccgtggcg
      181 ccggccgcgc gcagcgccgg tccgccgaat gcgtcgatgg tggcgtcggg ccagcggcgc
      241 cggagagcct cggccacccg cgccgcgtgc tggtcgccgg agggttcacc cgcggaaatg
      301 aagatccgcg gcgcgcggga cggcatcagc cgacgggccg ggccaccggc gccgattcga
      361 ccgcggccgt tacccgaagc gccaacgcca gcgcggcgcg gccctcgggg ccgctcacca
      421 ctgtgtcccg gtggccccgg actgcgtgca cgaagctggc gagctccaga gccagcgcgt
      481 cggcctgggg cgcggcgagc ggcacgtgct ccacgatctc ctgcaggctg gtgccggtgc
      541 ccggaatcca gctgggccgg atccgcatga agtccccgtt gcccgcggcc aggtcgagcg
      601 agaagtaacc attggactgg aacatccgca gcttgcgggt gcgttcgcgg gccatccggg
      661 aggaggtgac catcgccacg gcgccgttgg cgaactcgac ccgggcggtg gcgagatcga
      721 gaaacggggt cagcaccgcg acaccggacg cccgcacatc gaggacctcg gctccaccgg
      781 tcagatgcag caccaggtcg aggtcgtgga tcatcagatc cagcaccacc gcgacgtcgg
      841 tcccccgggg ctggaacggc gccaaccggg tgctctcgaa atagcggata tccccgaaat
      901 gctgctgggc cgcccggatg gcgcggttga agcgctcgat gtgtcctacc tgcagctgca
      961 gaccagtccg gtcggcggtg tcgatcagct ggtcggcttc ctccagcgac gcggcgaggg
     1021 gcttttccat cagcaccggc acacccgcct ccagggcgcg gatgccgacg tccacgtgcg
     1081 ccggcgtggg cacggcgacg gtgaccgcct ggacccgttg cagcagatcg tcgacgtcgt
     1141 tgaacgccgc gcagccggtc tcggccgcca cgctgagggc gcggggcgtg tcgaggtcgt
     1201 gcacgcccac caggtccacg ccgtggaacg aggccaggtg ccgcgcgtgg tgccggccca
     1261 gcgcgccgac cccgatgacg cccaccggca ggcgggccct cacgccggga tgccccgctg
     1321 cgaggtggcc acgaactcga gcagcaagcc gacctccgga agggagggca gctcctgccg
     1381 agcccgttcc tgcgcctgcg acagattgag atcggaattg aagaagagcc ggtaggcccg
     1441 cttgagcgcc gtgacggttt cggccggata gttggcccgc cggagaccaa cggtgttgag
     1501 cccgtagagc tccaccgggt tgcccaccgc cttcacgaag ggaggaatgt cctggttcac
     1561 ccggctcatt cctccgacga acgccatcgg tccgatggtg acgaactggt gcaccgccac
     1621 caggccggag agaatcgccc gatcctggat ggtgacgtgt cccgccagct gggtgccgtt
     1681 ggcgatgatc acgccgtcgc ccacgtggca gtcatgtgcc agatgaacgt agctcatgat
     1741 gaagcagtcc gcccccaccc gggtggcgcc ggaagcggac gtgccccggt tgatggtcgc
     1801 gtactcccgg atccgggtgc ggtcgcccac gtcgacccag gtttcctccc cgccgaactt
     1861 gaggtcctgg ggttccccgc ccaggatgct gccgatgccg acggtcacct cggttcccag
     1921 ccggacgttg cgttccagcg tagcccgggc caggatgcgg cagcggtccc cgaccgtcac
     1981 gtcgggcccg atgatcgcga aaggtccgac ctccacgtcg tgtcccaggc aggctccggg
     2041 atcgacgatc gcggtggcat ggatcccggg cttcatcggt ccaccacccg cgccatgaat
     2101 tccgcttccg ccaccagatt gccgtccacc caggcggtgc cgcgcatgcg gcaggtccgc
     2161 ccccggtgct ggatcatctc cagctccgaa cgaagctgat ccccgggcac caccggccgc
     2221 cggaacttca cgttgtcgat cgacatgaag tacacgacct tgttttccgg ccggtcgacc
     2281 gtgcccatca aaagaaatcc gccggtctgg gccatcgcct cgatgatcag caccccgggc
     2341 atgatcgggt gcccggggaa atggccctgc atgaagggct cgttgatggt gacgttcttg
     2401 atgcccacca cccgctggtt gccgatgatc tcgacgatgc gatcgaccag gagcatcgga
     2461 tagcggtgcg gcatgatgtt gaggttccgg ccgatgtcga gcgccacggt gctgcgccgg
     2521 ccggcgcgcg cgatggcccg ggcgacgctg acgttgcccc ggtggctggg ccgggtggcg
     2581 atgacatggg cccggacccg gccccccgcc agcgccaggt cacccacgat gtcgccggcc
     2641 ttgtgccgca cgaattcgtc ggcccagcgg agctcggtcc cgatgacccc gctgtcgctc
     2701 agggccaccg ccgacgcggt cgacgcgccc ttaaggaggc cctgggcccg gagcgcttcc
     2761 acttcgcggg taaagccgaa ggtgcgggcc cgggccagct cccggcggaa gtcggcggga
     2821 ttgatgtcgt aggtaccggc ctggcgcccg atgacgggat ggtcccattc gatcgtggcg
     2881 gtgacccgga gtgatttcgc cggcgccacc acgtagctcg aatcgccctc cgacagagtg
     2941 aacgccgccg gcacgtcgat ccaggtcggc tcgcccgcct gctcggcgac gccggcccgg
     3001 tccagcagtt ccatccacgg aagaaacgag ccgtccagga tgggcggctc ggggccatcg
     3061 agctccagca cgacgtcgtc caggcccgac gcgacgacgg cggccagcag gtgctccacc
     3121 gtatgaatgg tggattcgcc atggccgatg gcggtgcgcc gctcggtggc ctcgacctcg
     3181 tccacccgcg ccggaatctc cggttgcccc ggcagatccc gccgccgaaa cacgatcccg
     3241 tgctccgagg gagccgggcc ggcggtgacc gtggtacaga cgccggtgtg gagccccaca
     3301 ccctggaccg actccgtctt tgccagggtc cgcctaggca tgcgcgttcc gttccttgac
     3361 cagcgcctcg aggttcttgg ccagcggcgc caggcgatag agcacggcgt gcgatcgcag
     3421 ccactcgcga tggggccggg ccggcgagcc gccgtagtcg gcgcccgcgg gaatgtcgtt
     3481 gccgaccccc gactgggcgg ccacccgggc gccggcgccg atgctgagat gacccaccac
     3541 gcccacctgc cccgccagga tcacgccgtc gccgatgcgg gcgctgccgg ccacgccgac
     3601 ctgcgacatc agcaagcagc ggcgcccgat ccgcacgttg tgtcccagct gcaccagatt
     3661 gtcgatcttg gtccccgcac cgatgactgt atcgtcgatg ctgccccgat cgatgcaggt
     3721 gttggcgccg atgtccacgt catcctcgat gagacagcgc ccgacgtggg ggagccgttc
     3781 caggccgcct tcgccgggcg cgtagccgaa tccacggccg cccaggaccg cgcccgcctt
     3841 cacccggacc cggcagccga ggcgggtgcc gctacagcat acgacgcggg gacccaggac
     3901 gctgtcatta ccgatctcga cctggtcctc gatcaccgta ccggagccga tcaccacccg
     3961 gtcgcccagc cggactccgg cgccgatcac ggcgtagggt gcgatcgaga cttcccgccc
     4021 caggatgacg ccggcgccga gccgggcggt gggatcgatg cctggagcgg gaggggcctc
     4081 gggatggaga tgcgccagca cctggcccat ggcccgcgcc ggatcccgca ctacgatgcg
     4141 gaccgccggt ccaccggcgg cgcccgccag atcgtccgcc accagcacgc agccggcctg
     4201 agacgcgcgg aaggcatcca ggtatttccc ggatgagaga aaggaaagat cggccgggcc
     4261 ggctcgatcg agcggcgcga agcccgtgag atgcaccgac ccgtcgccga caaggcgacc
     4321 gccgatcagc tcggcgacgg cgcggggggt cagggcaccg ggctccacgc agtggtcagt
     4381 tggtctgccg caaccgctgg atgacccggg gggtgatgtc caggctcttg tcgtaggtca
     4441 cgatgccgag tccctgggcc cccaggtcga tgatcatggc gaagttgctt tcggcccgga
     4501 tcccctcgat gatcgcggtg agccgttcct gcatcggctg cagcaactct cgctccctga
     4561 gcgccagttt ctgctggaga tcgcgcgccc gggtttgcag ctgctcgttc ttggtctcga
     4621 gctctttccg ccgggtggcg cggttggtgg ccgacagcat cggctcctgt tgctggaact
     4681 gggccagcgc ggaatccagc tgcgcctgca gccggcgcaa ctcgccctgg gtcgcttccc
     4741 cttccttgac gaacgtggac tcggccttgg cgtagcccgg cattgcctgc agcgccgacc
     4801 gggcgttcac aaaggcgatc ttggccgggg caccggaagc ctgttgcggc tgttgcgcgg
     4861 cggccgggcc gatcccgagt gccgcgcctg
//
LOCUS       DASWKS010000297         5010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3121572, whole genome shotgun sequence.
ACCESSION   DASWKS010000297 DASWKS010000000
VERSION     DASWKS010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3121572"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VGA78_08545"
     CDS             <1..533
                     /locus_tag="VGA78_08545"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEX9893961.1"
                     /translation="TGLRMAVRGFALLLGLQLLYGAFVAGLKAGGMFNTFPLMGGALV
                     PTGLGLLSPGWRNLTENPVAVQFIHRLLGIALLVYGLVLGRRLVRHGLPLEGKLVGGA
                     VLLQFVLGVFTILRFPVSPVFWGALHQAGAVVLLTATVIALHATREYVPPDTVESPGF
                     SPPGVSANPVAVPIDS"
     gene            613..1932
                     /locus_tag="VGA78_08550"
     CDS             613..1932
                     /locus_tag="VGA78_08550"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX9893962.1"
                     /translation="MTGTLGRVAVIGAGSSGLTAAKNFRAAGFAVEVLEREDDLGGNW
                     NYGKSGARVYRSTHTISSKPGTEYPDFPMPREFPDYPHHSQILSYLRDYARQFDLLPL
                     IRFNTSVDRVAPSAEGQADSAWEITLAGGERRRFDLVVVANGHHWFPKQPGYPGGFTG
                     LSLHSADYRTPEIFDGERVLVVGGGNSGCDIVVEAAQNGAHAWHSTRRGYWYLPKYLL
                     GKPADQVADQMLALGAPLWLRRASATLMHRLLVGSPARIGLPRPDHRLFETHPIVNSL
                     LPYYVGQGDITPKPDITRVDDRRVHFVDGTAAEVDVIVWATGYLIRFPFLEERHLNWQ
                     DGRPRLYLNLFHPTYDTFFMAGLIQPDSGQFGLVHWQTVAAARFARAVRAGSPSATAL
                     RERKANPWDDLGNGIRYRDSTRHYLEVEHWSYRKKLRRWAERMPIDD"
     gene            2036..3136
                     /locus_tag="VGA78_08555"
     CDS             2036..3136
                     /locus_tag="VGA78_08555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893963.1"
                     /translation="MSALAALLVLPIAWFEAQRPPHTWRLSERPVLSIGSQDGAGPES
                     FGRVRGTVRLSSGAVVVVDGMNMELRLFSPAGKPLRTSGRRGAGPGEFRLVGPVRRCA
                     GDSTFVYDPSLWRISVFSPDGVYTRALDVHTLSGNELSPSDFRCNSGGTLAFVHRSAA
                     PPTGIGPRRPDVAITVLAPNANAVKLGTFPASERYFLGQEDVPRPLGKQTSVALGSTF
                     AYVGTGDAFEVAQFSLRGERVDTVRDSRAAVPVTAAHVNRFITQELARRAGRDTRRIE
                     RLYRGIEYPGAFPAYANLMVDGLDNLWIEGYPIPGKELRDWSIYSPTGTAIGVLRVPS
                     NLQLLEAGRDYVLGVWRDELDVEFVQVYSLVK"
     gene            3261..3587
                     /locus_tag="VGA78_08560"
     CDS             3261..3587
                     /locus_tag="VGA78_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003359266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEX9893964.1"
                     /translation="MLVITTNTAEGHRITKYMGVVSGEAILGANIFKDLFAGIRDIVG
                     GRSAAYERELRAARDLAIGEMCEEASALGANAVIGVDLDYESIQMGSGGGMLMVSASG
                     TAVVLA"
     gene            3687..4961
                     /locus_tag="VGA78_08565"
     CDS             3687..4961
                     /locus_tag="VGA78_08565"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HEX9893965.1"
                     /translation="MITVTAVDHGSIAEEIGIVPGTALVSVNGRELEDFLDWEFLTAE
                     DAFLLHVRQPDGDEIEFDIERPAHESLGVSLEPPRIRRCANRCDFCFVDGLPQGLREV
                     LYIRDDDYRLSFRYGNFATLTNLKERDLRRIVEYRLSPLYVSVHATDPVIRRWLLRNP
                     AAPDVLEQLRFFAEHGISFYTQIVMSPGVNDGAVMTQTLTDLYSLGDPVLNVSVVPVG
                     LTEFSRHDRCREPTRDECRAAVAQVERWSEQALAERGMHWAYGADELYLRAELPLPPE
                     PAYEGFEQVENGVGSVRWLQRAVREGRDELAEWEGLRIGVCTGTSMGLLMPEVLTPLA
                     RATGARFELITLENSLFGPRVTTAGLLPGRAFLEALQHRKNLDLVLLPGEAVNDAGRF
                     IDDLPFDALAAAVPVPLRLSKTFVDAADRVAA"
BASE COUNT          808 a         1629 c         1637 g          936 t
ORIGIN      
        1 cgaccgggct tcgaatggcg gtccgcggct tcgcgttatt gctggggctg caactcctat
       61 acggcgcctt cgtcgcaggg ctcaaggccg gcgggatgtt caacacgttc ccgctgatgg
      121 gcggcgcgct ggtcccaacg ggactgggtc tcctctcccc gggatggcga aacctcaccg
      181 agaatccggt cgcggtgcaa ttcattcacc ggctgctcgg aatcgctctg ctggtctatg
      241 gtctggttct ggggcgccgg ctggtccggc acggtctgcc actcgaaggg aagctggtgg
      301 gtggcgcggt gctgctccag ttcgtcctcg gggttttcac catcctgcgc tttccggtga
      361 gtccggtgtt ctggggggcg ctgcaccagg ccggcgccgt ggtactgctc accgccaccg
      421 tcatcgccct gcacgcgacc cgcgaatacg ttccgccgga cacggtcgag tcaccgggct
      481 tcagcccgcc cggcgtgagc gcgaacccgg ttgcagtgcc gattgacagt tgacgattga
      541 caattacatg aagcgaagat ctcctcaggc aattgtcaat catcaattgt caatcgacaa
      601 tggttgctct ccgtgactgg cacgctcgga agggtcgccg tgatcggggc cggcagctcg
      661 ggactcactg ccgccaagaa ctttcgcgcc gcgggcttcg cggtcgaggt cctggagcgg
      721 gaagacgacc tgggcggcaa ctggaactac ggcaagtccg gcgcacgggt ctaccgctcc
      781 acccacacca tcagctccaa gcccggcacc gagtatcccg actttccgat gccgagggag
      841 tttcccgact atccccatca cagccagatc ctctcctacc tgcgcgacta cgcccgccag
      901 ttcgacctgc tgccgctgat ccggttcaac acctcggttg accgggtggc gccatcggcc
      961 gagggccagg ccgactcagc ctgggagatc accctggccg ggggtgagcg ccgccggttc
     1021 gatctcgtgg ttgtggccaa cggtcatcac tggttcccca agcagccggg ctatcctggt
     1081 gggttcaccg ggctctcgct gcactcggcg gactatcgta cccctgagat cttcgacggc
     1141 gaacgggtgc tggtggtcgg gggcgggaac agcggctgcg acatcgtggt ggaagccgcc
     1201 cagaacgggg cgcacgcctg gcacagcacc cggcgcgggt attggtacct ccccaagtac
     1261 ctgctgggga agccggccga ccaggtggcc gaccagatgc tggcgttagg cgcgccgctg
     1321 tggttgcgcc gggcttcggc caccctgatg caccggctgc tggtcggttc gccggcccgc
     1381 atcggccttc cccggcccga ccatcggctg ttcgagaccc accccatcgt caactcgctg
     1441 ctcccctatt acgtgggcca gggcgacatc acccccaaac ccgacatcac ccgggtggac
     1501 gaccgcaggg tgcacttcgt cgacggtacg gcggccgagg tggatgtcat cgtctgggcc
     1561 accgggtacc tgattcgatt cccgttcctg gaggagcgcc acctgaattg gcaggacggc
     1621 cggccgcggc tgtatctcaa tctgtttcac ccgacatacg acacgttttt catggccggg
     1681 ctgatccagc ccgacagcgg ccaattcggc ctggtccact ggcagaccgt cgcagcggct
     1741 cgcttcgccc gcgcggtcag agcgggcagc ccttcggcca ccgccttacg ggagcgcaag
     1801 gcaaacccgt gggacgatct gggcaacggc atccgctacc gagactcgac ccgccattat
     1861 ctggaagtgg agcactggag ctaccggaag aagctgcggc gctgggcgga acgcatgccc
     1921 attgacgatt gacgattgac gattgacgag tacgtgtcgg gatccacggc aagcaattgt
     1981 caattgtcaa ctgtcaattg tcagtgcggt actggagtct tgattgctag ttcacgtgag
     2041 tgctctcgcc gcgttgctgg tgctgcccat tgcctggttc gaagcccaaa ggccgcccca
     2101 cacctggcgg ctttcggagc gccccgttct gtccattggt tcgcaggacg gcgcgggacc
     2161 ggagtcgttc ggccgggtca ggggtacggt tcggctgagc tcgggggcgg tcgtcgtggt
     2221 cgatggcatg aatatggagc tgcggctctt ctcgcccgcc ggaaaaccgc tcaggacctc
     2281 cggacgccgg ggagccggcc cgggggaatt ccgcctcgtg ggtccagtcc ggcgttgcgc
     2341 cggtgattcc acatttgttt acgatccgtc gctgtggcgt atttcggtgt tcagcccgga
     2401 cggtgtctac acccgggccc tcgacgtcca caccctgtcc gggaacgaat tgtctccgtc
     2461 tgacttccgg tgtaacagcg ggggaaccct ggcgttcgtc catcggtcgg ctgcacctcc
     2521 cacgggtatc ggtccgcggc gccccgacgt ggcgatcacg gtcctggcgc ctaacgccaa
     2581 cgccgtgaag ctcgggacat tcccggcctc ggagcgctac ttcctgggcc aggaggatgt
     2641 tccccggccc ctcggcaaac agacctcggt ggccctgggg tccacgttcg cgtatgtggg
     2701 caccggcgat gccttcgaag tcgcacagtt ctcgctccgc ggagaacggg tggatacagt
     2761 gcgggacagc cgtgcagcgg tacccgtgac agcggcgcac gtgaaccgat tcatcaccca
     2821 ggagctcgca cgtcgagccg gtcgggatac cagacgaatc gagcgactct accgggggat
     2881 cgagtatccc ggcgcgttcc cggcttacgc taatctgatg gtcgatgggt tggataacct
     2941 gtggatcgaa ggctatccca tcccggggaa ggaactccgc gactggtcga tctattcccc
     3001 gaccggtacc gccatcggcg tgctgcgagt ccccagtaat ctgcagctgc tggaggcagg
     3061 ccgggattac gtcctgggag tgtggcgcga cgagctcgac gtagagtttg tccaggtgta
     3121 ttcgctggtg aagtgagggg ctgggcccgt cgcacacctc gcattcgtga aagctctcgc
     3181 cattgacgat tgacgattga tgattgacaa ttgctcgctg tgttccggaa caaccgactg
     3241 caatcgtcaa tggagtccct atgctcgtca tcaccaccaa cactgccgaa ggccaccgga
     3301 tcaccaagta tatgggcgtg gtctcgggtg aagccatcct cggcgccaac atcttcaagg
     3361 acctcttcgc cgggatccgg gacatcgtgg gcggccggtc cgccgcctac gaacgcgagc
     3421 tccgggccgc ccgcgacctc gccatcggcg agatgtgcga ggaggcctcc gccttgggcg
     3481 ccaatgccgt catcggagtc gacctcgact acgagagcat ccagatggga tccggcggcg
     3541 ggatgctgat ggtgagtgcc tcggggacgg cagtggtgct ggcctgaaag caggcgtcga
     3601 cccttccgac cttgtagtgt tacgtaattt cataagtcct aagtcttgat aaatcagggc
     3661 gatagcgcca tctttcgccc cggtttatga tcacggttac cgcggtagac cacggctcca
     3721 tagcggagga aatcggcatc gtccctggga ccgcgctggt ctcggtcaac gggcgcgagc
     3781 tggaggactt cctcgactgg gaatttctga ccgccgagga cgccttcttg cttcacgtcc
     3841 gccagccgga cggtgacgag atcgagttcg acatcgagcg gcccgcccac gagtccctgg
     3901 gggtgtccct ggagccaccc cggatccgtc gatgtgccaa ccgctgtgat ttctgctttg
     3961 tcgacggctt gccccagggc ctgcgagagg tgctctacat tcgggacgac gactaccgcc
     4021 tctcgtttcg ctacgggaac ttcgccaccc tgaccaatct caaggagcgg gacctgcggc
     4081 ggatcgtgga gtaccggctg tccccgctct acgtctcggt ccatgccact gacccggtga
     4141 ttcggcgctg gctgctccgt aacccggccg cacccgacgt cctggagcag ctgcgcttct
     4201 tcgcggagca cggcatctcc ttctataccc agatcgtgat gtcccccggc gtcaacgacg
     4261 gcgcggtcat gacccagacc ctgaccgacc tgtattcact gggcgacccg gtgctgaacg
     4321 tctcggtggt tccggtgggg ctcaccgagt tcagccggca cgaccgctgc cgcgagccga
     4381 cccgggatga atgccgcgcg gcggtggccc aggtggaacg ctggagcgag caggcgctgg
     4441 ccgagcgcgg gatgcactgg gcctacggcg ccgacgagct ctacctccgg gccgagctgc
     4501 cgctgcctcc cgaaccggcc tacgagggct tcgagcaggt ggagaacggg gtcggctcgg
     4561 tccgatggct gcaacgggcg gtgcgagagg gccgggacga gctggccgag tgggaggggc
     4621 tccggatcgg ggtctgcacc ggaaccagca tgggcctgct gatgccggaa gtgctgacgc
     4681 cgctggctcg cgccaccggc gcccggttcg agctgatcac gctggagaac tcgctgttcg
     4741 gtccccgcgt gaccaccgcg ggcttgctgc ccggccgagc ctttctcgag gcgctgcagc
     4801 accggaagaa tctggatctg gtactcctgc ctggtgaggc cgtgaacgac gccggccggt
     4861 tcatcgacga tctgccattc gacgcgctgg cggcagcggt cccggtaccg ctccggctgt
     4921 cgaagacttt tgtcgacgca gccgatcggg tggcggcatg agcaagccca ccgtggccat
     4981 catcggccgg cccaacgtgg ggaagagcac
//
LOCUS       DASWKS010000298         2470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3121584, whole genome shotgun sequence.
ACCESSION   DASWKS010000298 DASWKS010000000
VERSION     DASWKS010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3121584"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..830
                     /locus_tag="VGA78_08570"
     CDS             <1..830
                     /locus_tag="VGA78_08570"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9893966.1"
                     /translation="NQWNDWTAAGLPLDHAFNTNVHTELKNSWWFHAGITWGGVGDVF
                     CDRCARGGPALRTDQIISAWSGFSGDERKLILPELWFNYWQADEGRSHAVSLQPYVRF
                     RLSSRMTMSSGLSLSRNRDDRQWFDNFTDPDGVTVHHTFAHLEQETASLTGRLDITAT
                     PTITLQVYASPFITKGEYSNLRELNQPRAANYDDRFMPYTAITDPGGFNFKEFRSNVV
                     ARWEYRPGSALYLVWQQGRSDFEGERGDRSFRSDLNRLFDTHPNNTFLIKMSYWFDR"
     gene            complement(1051..2373)
                     /locus_tag="VGA78_08575"
     CDS             complement(1051..2373)
                     /locus_tag="VGA78_08575"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX9893967.1"
                     /translation="MIIPSRRWFLAAAALAALAPLALVWPAGAALLLVADLGWIGALL
                     VDAWRSAAVPLDAFRPERETPPAFSVGRPLPVTYRWTNPLSYRARLTVREALPAPLRL
                     SSAAERTLDLPARGTASEPLVIEPIRRGKARSGPLHLRVEGPWGLALRQGRLDLPWEA
                     TVFPSLKGVALRALLTPAQRRREAGLRSIRRLGEGRVFESLAEWIPGDDTRTIDWKAT
                     ARRGKVMARRYEDERRQQVVLVLDAGRRLTAESEGRARLEDAIEAVLHLAVTAIDHDD
                     DVGLMVFTDRVERYLRPARGRRALAAIMDALAAVEGRLVEPDYPAAFAFLATRSRRRA
                     FTVVFTDIIDRTASEALIAHTVSLRPRHLPLAVTLRDPSLERLANARPDDPDGAFRRA
                     AAEELLLARAEALADMRHRGVLVLDVPPADAARAALAMYERLKRGGKI"
BASE COUNT          409 a          883 c          811 g          367 t
ORIGIN      
        1 tgaaccagtg gaatgactgg accgccgccg gcctgccgct cgatcatgcc ttcaacacca
       61 acgtccacac cgagctcaag aacagctggt ggttccacgc tgggatcacc tggggcggag
      121 tgggagacgt gttctgcgac cgctgcgccc ggggcggacc agcccttcgg accgaccaga
      181 tcatctcggc ctggagcggg ttcagtggag acgagcgcaa gctgattctg cccgagctct
      241 ggttcaacta ctggcaggcc gacgagggac ggtcgcatgc ggtcagcctt cagccctacg
      301 tccgcttccg gctctcatcc aggatgacga tgtcctccgg cttgagcctc tcgcgcaacc
      361 gggacgatcg ccagtggttc gacaacttca ccgatccgga cggggtgacg gtgcatcaca
      421 cctttgccca cctggagcag gaaaccgcca gcctgaccgg ccggctggac atcaccgcga
      481 cgcccaccat cacgctgcaa gtctacgcct cgcccttcat caccaagggc gaatactcca
      541 atctgcggga gctgaatcag ccccgggccg cgaactacga cgaccggttc atgccctaca
      601 ccgcgatcac cgatcccggg ggattcaact tcaaggaatt ccggtccaac gtggtggcgc
      661 gctgggaata ccggcccgga tcggcgctct acctggtgtg gcagcaggga cggtccgact
      721 tcgaggggga gcgaggcgat cgctctttcc ggagtgatct caaccggctg ttcgacactc
      781 atccgaacaa cacgttcctg atcaagatgt cgtattggtt tgatagatga ggcacacgtt
      841 ccggcgccat gttccaggtt ccgcgttccg ggttccacgt gcggtgcaca gtgcagtgcc
      901 aggtgcggtg ccgggtgcca ggttccaggc aagatccttc gctgcgctca ggatgacagc
      961 ggtgggtcag gtcaagcact cagcacctgg caggtagcac cgcacgcagc accgcacctg
     1021 gaacccggaa cgtggaaccc ggaacgatgt tcagattttc cctccccgct tcagcctctc
     1081 atacatcgct aatgccgcgc gcgccgcgtc ggccggcggc acatccagga ccaggacccc
     1141 gcggtgccgc atgtccgcca gagcctccgc ccgcgccagc agcagctcct cggccgcggc
     1201 gcggcggaag gcgccgtcgg gatcgtccgg cctcgcattc gccagccgct cgagggaagg
     1261 gtcccgcagg gtgaccgcga gagggagatg gcgggggcgc agtgacacgg tatgggcgat
     1321 cagcgcctcg ctggcggtac ggtcgatgat atcggtgaac accacggtga aggcccggcg
     1381 ccggctccgg gtcgcgagaa aggcgaacgc cgcgggataa tcgggctcga ccaaccgacc
     1441 ctccactgcc gccagtgcgt ccatgatcgc cgccagggct cgccgaccgc gggccggccg
     1501 gagatagcgc tcgacccggt cggtgaacac catcagcccc acatcgtcat catggtcgat
     1561 ggcggtcacc gcgagatgga gcaccgcttc gatcgcgtct tccagtcggg ctcggccctc
     1621 gctttcggcg gtgagccgtc gccccgcgtc cagtaccagc accacctgct ggcggcgctc
     1681 gtcttcgtag cggcgcgcca tcaccttgcc ccgccgcgcc gtggccttcc agtcgatggt
     1741 gcgggtgtca tcgcccggga tccattcggc caggctctcg aatacccgcc cttcccccag
     1801 tcgccggatg ctgcggagac ccgcttcccg gcgacgctgg gccggtgtca gcagggcccg
     1861 cagggccaca cccttgagcg atggaaacac cgtcgcctcc cagggcaggt cgagccgccc
     1921 ctgccggagc gcgagtcccc agggaccctc cacccggagg tggagcggac cgctccgcgc
     1981 cttgccccgc cggatcggtt cgatcaccag tggctcgctg gctgtccccc gggccggcag
     2041 gtccagcgtg cgctcggccg cgctgctgag ccgaagcggc gccggcagcg cttcccgaac
     2101 cgtcagccgg gcgcgatagg acagcggatt ggtccagcga taggtgaccg gcagcggccg
     2161 cccgaccgag aacgcgggcg gcgtctcccg ctccggccgg aaggcgtcga gcggcacggc
     2221 ggcgctgcgc caggcgtcca ccagcagcgc gccgatccac cccagatccg cgaccagcaa
     2281 cagggcggcg ccggccggcc acaccaaagc cagaggggcc agcgcggcca acgccgccgc
     2341 ggccaggaac cagcgccggg atgggatgat catgcccggg gcgcgtcgac ccgttcgatc
     2401 aggctctgga gcgccacgtc ggcggtgacg ccttccagct cgagctcggg cgcgaccgcc
     2461 acccggtggc
//
LOCUS       DASWKS010000299         5370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1642718, whole genome shotgun sequence.
ACCESSION   DASWKS010000299 DASWKS010000000
VERSION     DASWKS010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1642718"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VGA78_08580"
     CDS             complement(<1..266)
                     /locus_tag="VGA78_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9893968.1"
                     /translation="MTWGHVVVATDGPGPGMHALQVATELSRRASVRLTLVTVLRPGE
                     SVPSALRPHEPLVLRGDPGIEIARYAEDSHADVIVLGRRAIRYGR"
     gene            347..1567
                     /locus_tag="VGA78_08585"
     CDS             347..1567
                     /locus_tag="VGA78_08585"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEX9893969.1"
                     /translation="MNPLLAERLEHLVMGGNALIAEPNLDLLLPRIADLARSVVQARF
                     AAIGLLAPDLRTLEFFVTSGLDDQVAARIGHRPQGHGILGLVIREARPIRLPDLASHP
                     DSAGFPTGHPPMRSFLGVPVIGQHGVVGNLYLTEKLGVAEFSDEDEYLAVLLAGMAGS
                     ALENARHHEESARLLAEVQELMRSRERFFATVNHELRNSLAAVLGWAEMLVRRKDPAG
                     VPKAAFEVLESAETAVSLINDLLDLSRLDEDRLKPVFSTVDCRLMLDRAGARVTPAAN
                     ARGIRIVISQQGEVPVCLTDPHRVEQILVNILGNAVTHSPEGNAISVTVRGTPERVVV
                     RVYDNGPGIPEENLQRIFDLYFTKGGQDGSGVGLGLPLARRLARLLGGELSATNRPEG
                     GAVFVLELPVKGGP"
     gene            1707..2408
                     /locus_tag="VGA78_08590"
     CDS             1707..2408
                     /locus_tag="VGA78_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013804409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9893970.1"
                     /translation="MKVLVVEDDRKVAGFIEQGLREEGYVVDVAADGDEATMLAHVYS
                     YDIVLLDIVLPKKNGFQVATELRREGRNVPILMLTSRDSVEDVVRGLDAGADDYLPKP
                     FHFDELLARMRALIRRGGAERLEVLRFGDIHMDRLRHRVEVGTQVLDLTAKEFQLLEY
                     FLLHPEEVVRRTTLLEKVWDMHFDPESNVVDVHVGNLRRKLKRSTDAQQIETVRGVGF
                     ALRHTSDGRPQSDGE"
     gene            2419..4242
                     /locus_tag="VGA78_08595"
     CDS             2419..4242
                     /locus_tag="VGA78_08595"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX9893971.1"
                     /translation="MRLAQPAAALIILTTGAIGRLAGFPTAAGWIWAAGVVLVGFPLV
                     IRTVPGAVGGRFAADLVASLAIVTALLLWEPLAGLVVALMQSGGEALEAQAARRATRA
                     VRDLEAQSPRVAHRLSDRGVEDVATGQLMPGDRVLVRPGEMVPCDGIVESGDAAVDVS
                     RVSGEALPLHARGGISLMSGSLVVDGPLIFQTLRRAQDSLYEQVVALVRTAQASKAPF
                     QRLADRAAVWFTPLTLATCAGAWIWSGDPDRVLAVLVVATPCPLILAAPVAFVGGINR
                     AARQGIVVRHGEAIESLAAVDAVLFDKTGTVTVGEPCVTGVWVTPPWSEPDVLAYAAA
                     VEEGAGHPLARSITSEARQRGLPRLEASRIRESPGRGVAGVVAGREVVVGSRSLVAET
                     AWGDITALGGSGEISADLHAYVTVDRLPAAVIGFRDQPRAGISAALGELRSLGITRLA
                     LLSGDHQTTTASVARTIGFTDVAGDLLPQDKVARVVALRRQGYRVLMVGDGINDAPAL
                     SAATVGMAVARSGSGIAAEAADVVLLSPEPRRIPEAIRMARRTLRIARQSVGLGLGLS
                     GIAMVAAAAGFIAPVPGALLQEGIDLAVILNALRAAPWQRD"
     gene            4343..4483
                     /locus_tag="VGA78_08600"
     CDS             4343..4483
                     /locus_tag="VGA78_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893972.1"
                     /translation="MSEMPPGLPRHPIGTFAFVGLYALAFVAAWFAVYTFIYLARHPV
                     TP"
     gene            4480..5001
                     /locus_tag="VGA78_08605"
     CDS             4480..5001
                     /locus_tag="VGA78_08605"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893973.1"
                     /translation="MKVDLYERIWMFGVAGMLVLFFASLANGAVNEGRHPPSHVETID
                     PSSVMKDPRFRVQGVRVDAEGQVHAWVVGLMFTWLPAELTLPADTPVTFHLTAIDVIH
                     GYQIVRTNGQTMVMPGYVSQFTTQFDAGEYLVACNEYCGLGHHNMASKITVVPRDQWQ
                     VPGTEPETPHDSH"
     gene            4988..>5370
                     /locus_tag="VGA78_08610"
     CDS             4988..>5370
                     /locus_tag="VGA78_08610"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX9893974.1"
                     /translation="MTRTNRLVLSHIGVSVTAFGLAATMALMQAISRANLDLPFRSAR
                     MYYMSVTAHGVLMALVFTTFFIMALGYATAQRENGEIKWPRFSWAMFWLAVVGTITSS
                     WAILTFKASVLYTFYPPLQAHPAFY"
BASE COUNT          856 a         1740 c         1837 g          937 t
ORIGIN      
        1 cgtccatacc ggatggcccg tcgccccagc acgatgacgt cggcgtggga atcctcggca
       61 taccgcgcga tctcgatgcc aggatcaccg cggaggacaa gcggctcgtg gggccgaagc
      121 gccgacggga ccgattcccc cggacgcagc acggtcacca acgtcagtcg aaccgacgca
      181 cggcggctca gctcggtcgc cacttggagc gcgtgcatgc ccggtccggg accatcggtc
      241 gccacgacta cgtgacccca agtcatgact ccaccgtagc ggccaccccg ttaagaagcc
      301 gtgaagcccg gacgaagaac gagtagcttt gatcaacatg cctggaatga acccactgct
      361 ggctgaacga ctcgagcacc tggtcatggg cggcaacgcc ctgatcgccg agccgaacct
      421 cgatctgctg ctgccgcgca tcgccgacct ggctcgctcc gtggttcagg cccgctttgc
      481 cgcaatcggg ctgctcgcgc cggatctgcg aacgctggag tttttcgtga cctcgggcct
      541 ggacgatcag gtcgctgccc ggatcgggca tcgaccccag gggcacggga ttctagggct
      601 cgtgatccgg gaggcgcggc caatccgact gcccgacctg gcgagccacc ccgattccgc
      661 cgggttcccg accggccatc cgccaatgcg ctcattcctg ggagtgccgg tcatcgggca
      721 gcacggagtg gtcggcaacc tctacctgac cgagaaactg ggcgtggccg agttcagtga
      781 tgaagacgag tatctcgcgg tgctgctggc gggcatggcc gggagcgcgc tggaaaacgc
      841 ccggcatcac gaagagtccg cacggttgct agccgaagta caggaactga tgcgttcgcg
      901 ggagcggttc ttcgccaccg tcaaccacga gcttcgcaat tcgctggccg cggtgctggg
      961 gtgggccgaa atgctggtgc ggcgaaagga ccccgccggg gtgccgaagg ccgcgttcga
     1021 agtgctggag tcggccgaaa ccgcggtgtc gctgatcaat gacctcctgg atctgagccg
     1081 tctggatgag gaccgactca aacccgtgtt cagcacggtc gactgccgcc tcatgctgga
     1141 ccgggccggg gcccgggtca cgccggcggc gaacgcacgc gggattcgga tcgtgatctc
     1201 gcaacagggc gaagtcccgg tgtgcctgac cgatccccac cgggtggaac aaatcctggt
     1261 caacatcctg ggcaacgccg tgacccattc gccggaggga aatgcgatca gcgtcacggt
     1321 gcggggcacg ccggagcggg tggtggtacg ggtatacgac aatggaccgg gcatccccga
     1381 ggaaaatctg cagcggattt tcgacctgta tttcaccaag ggcgggcagg acggctcggg
     1441 agtaggcctc gggttgccgc tggcgcgccg cctggctcgc ctgctcggcg gggagttgtc
     1501 ggcgaccaac cggcctgagg gcggcgcggt tttcgtgttg gagctgccgg tgaaaggggg
     1561 gccttaaagg ctaccttaag taaatggatc ttcatgctac attatgaggt gctttaggct
     1621 ggctccggta ggttttcttc accatgatcg gtctgagcag tgcacccgta cgccaggtcc
     1681 caggcgtcac cgagccgagc ccaaccatga aagtcctcgt cgtcgaagac gatcgcaagg
     1741 tcgcgggctt tatcgagcag ggcctgcgcg aagaaggcta cgtggttgac gtcgccgccg
     1801 acggcgatga ggccacgatg ctcgcccacg tgtacagcta cgatatcgtc ctgctggata
     1861 tcgtccttcc caagaaaaac ggattccagg tggccaccga gcttcggcgt gagggaagga
     1921 acgtgccgat tctcatgctg acgtcgcgcg actcggtcga ggatgtggtg cgcgggctcg
     1981 acgccggcgc ggatgattac ctccccaagc cctttcactt cgatgagctg ctagcccgga
     2041 tgcgagccct gatccgtcgc ggtggtgccg agcggctgga ggtgttgcgg ttcggagaca
     2101 ttcacatgga ccggcttcgc catcgagtgg aagtcgggac ccaggttctg gatctcacgg
     2161 ccaaggagtt ccagctgctg gagtacttcc tgcttcatcc cgaagaagta gtgcggcgga
     2221 cgaccctgct cgagaaggtg tgggacatgc acttcgaccc cgagagcaac gtcgtcgatg
     2281 tgcacgtcgg caacctccgg cgcaagctca agcgcagtac cgatgcccag cagatcgaaa
     2341 cggtacgggg ggtgggcttt gcacttcggc acaccagcga cgggcgaccc cagagcgacg
     2401 gagagtgagc caggcggatt gaggctggct cagccggccg ctgccctgat catcctcact
     2461 accggagcga tcggccgtct ggccggcttc ccaaccgccg ccggatggat ctgggcggcc
     2521 ggggtggtcc tggttggatt tcccctcgtc atccgaaccg tcccgggggc cgtgggcggc
     2581 cgattcgcgg ctgatctggt cgcctccctc gccattgtca cagctttgct gctttgggag
     2641 cccctggctg gactggtcgt ggcgctgatg cagagcggcg gggaggccct cgaagctcag
     2701 gccgcgcggc gagccacccg ggccgtgcgg gacctcgagg cccagagccc ccgggtggct
     2761 catcgcctgt ccgaccgagg tgttgaggac gtggcgaccg gtcagctgat gccgggcgac
     2821 cgggtactgg tgcgacccgg cgaaatggtg ccctgcgacg ggatcgtgga atcgggcgac
     2881 gccgcggtcg acgtctcacg ggtgagcggt gaagcgctgc cgctgcacgc gcgaggcggc
     2941 atttcgctca tgagcggcag cctggtggtc gacggtcccc tcatcttcca gacgctgcgg
     3001 cgggcccaag acagcctcta cgagcaggtg gtcgcgctgg tgcgcaccgc acaggccagc
     3061 aaggcgccct tccagcggct ggccgatcgc gccgccgtct ggttcacgcc gctgaccctg
     3121 gctacgtgtg cgggcgcgtg gatctggtcg ggcgaccccg accgggtgct cgcggtcctg
     3181 gtggtcgcga ccccctgccc tctcatcctg gccgcgccgg tcgccttcgt cgggggaatc
     3241 aaccgggcgg cccggcaggg catcgtggtg cgccacggtg aggcgatcga atcgctggcc
     3301 gcggtcgacg cggtgctgtt cgacaagacg ggcacggtga cggtggggga accgtgcgtc
     3361 accggcgtct gggtcacacc gccgtggagt gagcccgatg tgctggcgta cgccgccgcg
     3421 gtggaggagg gcgccgggca tccgctggcg cgttccatca cctcggaggc ccgccagcgg
     3481 ggactgcctc ggctcgaagc ctcacgcatc cgcgagtcgc ccggccgggg cgttgccggc
     3541 gtggtggcgg gacgcgaggt cgtggtggga tcccgatcgc tggtcgcgga aaccgcgtgg
     3601 ggagacatca cggccctggg cggctcgggt gagatttcgg ccgacctgca cgcctacgtc
     3661 accgtcgacc ggctgccggc cgcggtcatc ggttttcgcg accagccgcg ggcggggatc
     3721 agcgctgccc tgggcgagct tcgttccctg ggcatcactc ggctcgccct cctctccggc
     3781 gatcaccaga ccaccaccgc ttcggtggcg cgcaccatcg ggttcaccga tgtcgcgggg
     3841 gatctcctgc cccaggacaa ggtggcacga gtggtcgccc ttcgccggca ggggtatcgg
     3901 gtcttgatgg tgggcgacgg gatcaacgac gcacccgcgt tgagcgccgc cacggtcgga
     3961 atggcggtcg cgcggagcgg aagcggcatc gcggccgagg ccgcggacgt ggttctgttg
     4021 agccccgagc cacgtcggat cccggaagcc atccggatgg cccggcgaac tctccggatc
     4081 gcacggcaga gtgtgggcct cggtctgggc ctgagcggta tagcgatggt ggcggcggcc
     4141 gccgggttca tcgcgccggt gccaggggct ctgctacaag aaggcatcga cctggccgtc
     4201 atcctcaacg ccctccgggc ggccccgtgg cagcgggatt aagggcatct tcacgctgct
     4261 atgcaggtga attcatagcc gatccctgag cttgccttcc gcagggctga acccccctag
     4321 ccgtcattcc gcggagggct gcatgtcgga aatgccgccg ggcttgcccc ggcaccccat
     4381 cgggacattt gcgttcgtcg ggctctacgc actggcgttc gtcgcggcct ggttcgcggt
     4441 ctacaccttc atctatctgg cccgccatcc ggtaacgcca tgaaagtcga tctctacgaa
     4501 cggatctgga tgttcggcgt ggccggcatg ctggtgctct tcttcgccag cctggcaaac
     4561 ggcgcggtga acgagggccg gcatccgccc agccacgtcg agaccatcga tccctccagc
     4621 gtgatgaagg acccccgttt tcgggtgcag ggcgtccggg ttgacgccga gggtcaggtg
     4681 cacgcctggg tagtgggact gatgttcacc tggctgcccg cggagctgac cttgccggcc
     4741 gacacgccgg tcactttcca cctgaccgcc atcgacgtca ttcatgggta ccagatcgtc
     4801 cgcaccaatg gacaaaccat ggtgatgccg ggctacgtga gtcagttcac gacccaattc
     4861 gacgcgggag agtacctggt ggcgtgcaac gagtactgcg ggctagggca ccacaatatg
     4921 gcgtcgaaga tcaccgtcgt ccctcgggac cagtggcagg tcccgggcac cgagccggag
     4981 acgccgcatg actcgcacta accgcctggt cctctcacac atcggcgtgt cggtgacggc
     5041 cttcgggctg gccgccacga tggccctgat gcaggcgatc tcccgggcca acctcgatct
     5101 gcccttccgc tcagcccgga tgtattacat gtcggtgacg gcgcacggcg tgctgatggc
     5161 gctggtcttc accacctttt tcatcatggc gctgggctat gccaccgcgc agcgggagaa
     5221 tggggagatc aagtggcccc gcttctcctg ggccatgttc tggctggcgg tggtagggac
     5281 catcacctcg tcctgggcca ttctcacctt caaggccagc gttctctaca ccttctatcc
     5341 gccgctgcag gcccatccgg ccttttacat
//
LOCUS       DASWKS010000300         4126 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1643311, whole genome shotgun sequence.
ACCESSION   DASWKS010000300 DASWKS010000000
VERSION     DASWKS010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643311"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VGA78_08615"
     CDS             complement(<1..858)
                     /locus_tag="VGA78_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEX9893975.1"
                     /translation="MAETVTIPVSGMTCASCVSRVERALTREAGVSEAAVNLLLQQAT
                     VSFDPAATNPDRLVEAIQDIGYGAEIPVAVSSLSEEQEARDRAQLEEYRDFRRKALGS
                     GGLGVVTMLLSMPLMAGGAHGHAVVADPFMRWAMERLTPPLQAVAPGLYTVPPGLLSW
                     GLLGLTLGVMLWAGRHFYVRAWSALRHRTADMNTLVAVGTGAAFLYSVVATVAPGVFT
                     ANGLAPDVYYEAVVIIIALILAGNAFESRAKARTATALRALIELQPRTARILRGAIEQ
                     SVAVAAVRRG"
     gene            996..2222
                     /locus_tag="VGA78_08620"
     CDS             996..2222
                     /locus_tag="VGA78_08620"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9893976.1"
                     /translation="MTLLSLPAAAQEQNPSNLYLAELRYQGARLELGPPRKLTGDRGR
                     NSQPSFTPDSRAIVFNAVREGEGGQGDVYRIDLGSGVETRITRTPENENSPTISSSGE
                     LLVIRWKTETLFREWGLWVYGPDGTPRRGILPGPDTVGYFIPLDETHFVLVRPTSRFA
                     VALFDLESRQTVDLEWPVARLPPQRIPGQAAVSFVRTDSSGRHQIRRLDPARRQVSPI
                     APTVPGRTIHTWARSDLVLMAKGNTVFARSPGTDSAWRPVARFDAPDLQNVSTYVVSP
                     DGRWVILTSTLKPPLQVALIDSLESGQPVETVVARLRGMREAGSLDRYFLSEADLIGA
                     GSARQSTTLLQFVAELFPRSYRAVYALGNAHRAAGDFTQAAGAYRKALELNPRSTPAD
                     REAAQTAERALRDVTK"
     gene            2283..2612
                     /locus_tag="VGA78_08625"
     CDS             2283..2612
                     /locus_tag="VGA78_08625"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9893977.1"
                     /translation="MTRRTLGEFEHLVLLTMLRLEPETYGVPIVAEIARRAGQRVSRA
                     AVYVALRRLELKGLVASRVEARGESPGKPRVMFRLAPRGRARLVESRRLLLRMWEGLE
                     PLFEPGR"
     gene            complement(2681..3232)
                     /locus_tag="VGA78_08630"
     CDS             complement(2681..3232)
                     /locus_tag="VGA78_08630"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX9893978.1"
                     /translation="MRFPIPALVAGGLAAIAVVGIADIARSQGQAKLDDATILAVVEF
                     AHTAELETGQLAQEKGSAQEVKDLGRNFVTAHTQGRDEARALGTKLNITPKLPDADPM
                     AKAHSEAITKLRGLEGKGFDKAFVDHEVMFHTAVIEKVKTSLIPAATSPELKAYLNKL
                     TPSLQAHLDEAKALQTKIVAAED"
     gene            3572..4120
                     /locus_tag="VGA78_08635"
     CDS             3572..4120
                     /locus_tag="VGA78_08635"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX9893979.1"
                     /translation="MRFSLPAIAAGGLVAVAVLTVADIATSQADTPALDDAVILSALA
                     FTHDAEIEVGELGEKKGYAQEVKDMGKSFAAAHKAAKEEVKALGDKLDLKVGLPDDDP
                     MRKAHDDTKARLGELEGRPFDKAWVDQQVTFHENALEKVKAMIPTATNEEVKALLGRT
                     QTSVQTHLDAAKGLQTKIVATQ"
BASE COUNT          691 a         1382 c         1379 g          674 t
ORIGIN      
        1 gccccggcgg accgcggcca ctgccacact ctgctcgatc gcgccgcgga ggatccgcgc
       61 cgtccggggc tgcagctcga tcagggcccg gagcgccgtg gcggtgcgag ccttggcccg
      121 tgattcgaac gcgttgccgg ccaggatcag cgcgatgatg atcactacgg cctcgtagta
      181 cacgtcgggc gcgagcccgt tggcggtgaa gacgccgggc gccacggtcg ccactaccga
      241 gtaaaggaac gcggcgccgg tcccaaccgc caccagcgtg ttcatgtcgg cggttcgatg
      301 gcgcaacgcg gaccaggccc ggacatagaa atgccgcccg gcccagagca tcacgcctaa
      361 cgtcagcccc agcaggcccc aggacagcag gccgggcggc acggtgtaga gcccgggcgc
      421 caccgcctgg agcggaggag tcagccgttc catggcccac cgcatgaagg gatcggcgac
      481 cacggcgtgg ccgtgcgcgc cgccggccat caggggcatc gacaacagca tcgtcactac
      541 gcccaaaccg ccgctgccca gcgccttgcg acggaagtcg cggtattcct ccagctgggc
      601 ccggtcgcgc gcctcctgct cctcgctcag actcgagacc gcgaccggaa tctcggcgcc
      661 gtagccgatg tcctggatgg cctccaccag acggtcgggg ttggtggcgg caggatcgaa
      721 tgacacggtg gcctgctgca gcagcaggtt gaccgccgcc tccgagaccc cggcttcccg
      781 ggtcagggcc cgctccaccc gactcacgca cgacgcgcag gtcatgcccg ataccggaat
      841 ggtgactgtc tcggccatag tcttgatacc ctctttgggg gtataatctg aaataccccc
      901 tccccctatg tcaactttcc ggtcgaccgc cttcgacagt ccttcgaccg gtgtatcatc
      961 aacccatgcg cttcgcggtg ccttcgtatt gcctgatgac ccttctctcg cttcccgcgg
     1021 cggcacagga acagaatccg agcaatctct acctggcgga actgcggtat cagggagctc
     1081 ggctggagct gggtccgccc cgcaagctca ccggcgatcg ggggagaaac agccagccgt
     1141 catttactcc cgacagccgc gccatcgtct tcaacgcggt gcgagagggc gaaggtggcc
     1201 agggcgatgt ctatcgcatc gacctcggga gcggggtcga aacccgcatc accaggacgc
     1261 cggagaacga gaacagcccc accatctcga gcagcggtga gctgctggtc atccgctgga
     1321 agaccgagac cctgtttcga gagtggggtc tctgggtcta cgggccggat ggaacccctc
     1381 gccgggggat cctccccggt cccgacacgg tcggctactt cataccgctg gatgagacgc
     1441 acttcgtgct ggtgcgcccc accagccggt ttgcggtggc cctgttcgat ctggagagcc
     1501 ggcagaccgt cgacctggag tggccggtcg cgcgccttcc gccccagcgg attccgggcc
     1561 aagccgccgt cagcttcgtc cggactgatt ccagcggccg gcatcagatt cgccggctgg
     1621 accccgctcg acggcaggtg agcccgatcg cgcccacggt cccggggcgg accattcaca
     1681 cctgggcccg aagcgacctg gtgttgatgg cgaaaggaaa cactgtgttc gcgcgctcac
     1741 ccggcaccga ttcagcatgg cggccggtgg cccgattcga cgcgccggat cttcagaatg
     1801 tttccaccta cgtcgtgagt cccgatggtc ggtgggtgat tctcacgtcc accctcaagc
     1861 cgccgctgca ggtcgccctg atagactcgc tggagagcgg ccagccggtc gagaccgtgg
     1921 tggcccggtt gcgcggcatg cgggaggcgg gcagtctcga ccggtacttt ctctccgaag
     1981 ccgatctcat cggagccggc agcgcgcggc agtcgacaac cttgttgcag ttcgtggccg
     2041 agctgttccc gcgttcttat cgggccgtct acgcgctggg gaacgcccac cgtgccgctg
     2101 gtgatttcac ccaggcggcc ggcgcgtacc gcaaggcgct ggagctcaac cctcgcagca
     2161 cgcccgcgga ccgggaagcg gcccagaccg ccgaacgagc cctgcgggac gtgacgaagt
     2221 agtctccact cccggccaag aactcgcccg tccgcaggtc tgacaatgtt gtcatcaatc
     2281 ccatgacccg acgaaccctg ggcgagttcg agcacctggt gctgctgacg atgctgcggc
     2341 tggagcccga gacctatggt gtcccgatcg tggcagagat cgcacggcgg gccgggcagc
     2401 gggtgtcccg cgccgcggtg tatgtggcgt tgcgccggct ggagctcaag gggctggtcg
     2461 cctcccgggt cgaagcccgg ggcgagagtc cgggaaagcc tcgggtgatg ttccggctgg
     2521 cgccgagggg ccgggcccgg ctggtggaat cccgccggct tctgctccgc atgtgggaag
     2581 ggctcgagcc tctgttcgag cccgggcggt gaactagggg agaccactcc aggagcgcga
     2641 agccgccgcc gggccggcgc gctcccgggt ggagggcgag tcagtcctcg gccgcgacga
     2701 tcttggtctg cagggctttg gcctcgtcca aatgggcctg gagcgaaggc gtcagcttgt
     2761 tcagataggc cttgagctcg gggctggtgg cggccgggat gagcgaggtc ttcaccttct
     2821 cgatcaccgc cgtgtggaac atcacttcgt gatcgacaaa ggccttgtcg aaccccttgc
     2881 cctcgagtcc gcgcagcttg gtgatggcct cgctgtgggc cttggccatg gggtcggcgt
     2941 cgggcagctt gggggtgatg ttgagcttgg tgcctaacgc ccgggcttcg tcccgcccct
     3001 gggtatgggc cgtgacgaaa ttccgcccca ggtccttcac ttcctgggcc gagcccttct
     3061 cctgcgccag ctggccggtc tcgagctcgg cggtgtgggc gaattcgacg accgccaaga
     3121 tggtggcatc atccagcttg gcctggccct gggagcgggc gatgtccgcg atgcctacca
     3181 cggcgatggc cgcaagaccg ccggcgacga gagccggaat gggaaaccgc atagatcaac
     3241 cctcctgagt gttcgcgttg acgctgaaat cggtgtgatg ctgagcccgt tggcgcccgg
     3301 ggctcgcggg gagggcacaa cccaccctcc tttcaccggt tctgacgatg aggccatgag
     3361 gttctccaca atgtgagcac ggatgtgcgc gaggcatgca cgcagcattc agccggacgc
     3421 ccggatcaca tcgggctcgc ctatccgtgc tcacattgtg gggtcccctg tggcaggatc
     3481 gtcccaagtc cgtgagcggc accgtgccgc cgacggggtc cgatgcccca ggctcgcgac
     3541 tcaccgcccc acaacgtcag gaggatggat catgcgcttc tcgcttccgg ctatcgctgc
     3601 cggtggcctc gtggccgtcg ccgtgctcac cgtcgcggac attgccacgt ctcaggccga
     3661 cacccccgct ctcgatgacg ctgtcatcct gagcgccctc gcgttcaccc acgacgccga
     3721 gatcgaagtg ggagagctgg gggagaagaa ggggtacgct caagaagtga aggacatggg
     3781 aaagagcttt gccgcggctc acaaggcggc gaaggaagag gtcaaagcgc tcggggacaa
     3841 gctggacctc aaggtgggac tgccggacga cgacccgatg cgcaaagccc acgacgacac
     3901 caaggctcgt ctgggcgagc tggaaggccg gcccttcgac aaggcctggg tggaccagca
     3961 ggtcaccttc cacgagaacg cgctcgagaa ggtcaaggcg atgatcccga ccgccaccaa
     4021 cgaagaggtg aaggcgctgc tcggccggac ccagacctcg gtccagaccc acctcgatgc
     4081 cgccaagggg ctgcagacca agatcgtggc gacccaatag tcgaag
//
LOCUS       DASWKS010000301         9407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2741989, whole genome shotgun sequence.
ACCESSION   DASWKS010000301 DASWKS010000000
VERSION     DASWKS010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2741989"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..986)
                     /gene="sseA"
                     /locus_tag="VGA78_08640"
     CDS             complement(84..986)
                     /gene="sseA"
                     /locus_tag="VGA78_08640"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF008557.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HEX9893980.1"
                     /translation="MPTNLGPIVSGDWLQANLRQPGVVVLDASWYLAHLGRDPRREYL
                     GAHVPGALFYDLDAISDPGSLLPHMFGTPERFAEKMGELGVGDDDLVVTYDGSGANLS
                     AARAWWTFKVFGHDRVAVLDGGFITWQHEGRPVESGPVLRSPARFTPRYRPGLVRSLD
                     EVRAILGSGSEQVVDARSAGRYSGREPEPRPGLRSGHMPGSRNLPYPELVGLDGRLLD
                     RERLTARLRAAGIDLDRPIVTSCGSGVTACALLLVLDHLGHSGHALYDGSWSEWGGPI
                     DTPVVEGAGSRKEGARSGSEEPAV"
     gene            985..1392
                     /locus_tag="VGA78_08645"
     CDS             985..1392
                     /locus_tag="VGA78_08645"
                     /inference="COORDINATES: protein motif:HMM:NF014688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEX9893981.1"
                     /translation="MRFDKLIARFSGADRDTRLEAMLDASRTLPEVPERLRSRMSGLQ
                     VPECQTPVFLWVEPEDGRLRFHAEVPRDSPTVRGYVSLLIRTLDGATPAEVEQVPDDL
                     LDRLKLVETLGMIRIQGLTAVLRHLKRAARTPS"
     gene            complement(1364..2464)
                     /gene="serC"
                     /locus_tag="VGA78_08650"
     CDS             complement(1364..2464)
                     /gene="serC"
                     /locus_tag="VGA78_08650"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEX9893982.1"
                     /translation="MTDGALSDRIWNFSAGPAVLPEPVLRQAQEDLWNTRGSGVGIAE
                     HSHRGKVYETINAEAEVRCRELAGIPGNYKVLFLQGGASLQFAMVPMNLLPPGRVADY
                     IVTGIWAQKAIKEARQVGQVHSAFDGAAEQYRRIPSADQLAFSPDPAYVHLTTNNTIY
                     GTQWRSEPPVPATAPLVADTSSDMFSRPIDVSKYGLIYAGAQKNLGPSGIVLVIVRED
                     LIERAPSTLPNILQYRVHAKEKSLFNTPNTFGVYLMGEVFRWLQAEGGLDGMARRNAE
                     KARLVYDVIDSTDFWRGTADAGSRSLMNVCFRAPSEELEARFCAEATQAGLDGLKGHR
                     SAGGMRASIYNACPRAAVEALVQFMKEFERRA"
     gene            complement(2457..3665)
                     /locus_tag="VGA78_08655"
     CDS             complement(2457..3665)
                     /locus_tag="VGA78_08655"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9893983.1"
                     /translation="MKVLVADKFEKVGIDGLRELNCNVLYQPDLAPGDLPEGLRVFDP
                     KVLIVRGKKVGAPAFEAGPSLGLVIRAGAGIDTIDVDAASRLGVFVSNCPGKNSIAVA
                     ELVMGLILACDRRIPDQMADLRRGVWNKSEYSKARGLHGRTLGIVGLGQIGREIARRG
                     QAFGLRVVAWSRQLTIEDSTRMAIGYCQTPLEVARQSDIVSINVAATPETRQLVNPEF
                     LAAMRPGSYLINTARGTVVDEAALAEAIREKGIRVGLDVYQEEPSGSSGEFRPPLIEL
                     PGVYGTHHVGASTDQAQVAIAHEVIRIVQEYQSTGGVPNCVNRLAKSSATHVLSIRHQ
                     NRPGVLAHVFAVLSRAAINVEEVENIIYHGAQATLARIHLSQEPNVESMQEIRNGNPH
                     ILSAEIRPID"
     gene            complement(3665..4936)
                     /locus_tag="VGA78_08660"
     CDS             complement(3665..4936)
                     /locus_tag="VGA78_08660"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HEX9893984.1"
                     /translation="MRFKPFSAWRPRPDLAAQVASPPYDVVTRDEAARLAQGNPLSFL
                     HVGRSDIDLSPDVDPHDPRVYATARSNLDRLMRDGVLVHDARPAFYLYQLTMHGRSQL
                     GVVGCVHIDDYAADVIRKHEKTRKDKEDDRTRHVLTLNANAEPVFLTFRDDPRLAQRL
                     AQGTRGPALYDFMAPDGVRHQVWEASDTAPWVEAFATVPHAYVADGHHRCASAWRAGE
                     EIRAQHGEPGAEGEYAWFLAVLFPASQLRILPYHRVVRDLNRLSPEQFLERLGEVGWV
                     EPVADPEPPGPGSFGWYLNGRWYRLTLDRATIPSNDPIRSLDAVLLEERILGPILGIG
                     DIRTDNRVDFVGGIRGTPELQRRVDSGEMALAVALYPVTVEQLMAVSDAGQIMPPKTT
                     WFEPKLRSGLFVHSLDEPVQSPPSRLPSPVL"
     gene            complement(4970..6382)
                     /locus_tag="VGA78_08665"
     CDS             complement(4970..6382)
                     /locus_tag="VGA78_08665"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEX9893985.1"
                     /translation="MAPVSFLDQVNRIFDQAASHTGHNATLLRQIKVCNAVMSVAFPV
                     RRDDGTLEVVEGWRAQHSHHKLPTKGGIRFAPDVQADEVMALAALMSYKCAIVDVPFG
                     GAKGGIRIDASKYSASELERITRRYTFELVRKNFIGPGLDVPAPDYGTSPREMAWIAD
                     TYSSLRPGELDALACVTAKPLAQGGIRGRVQATGLGLFYGLREICSDGPLLKSLGLST
                     GLAGKRVVVQGLGNVGYHAACYIAQGGAVLVGLAEREGAIANSDGLDLEAVMAHRKAT
                     GSLLHFPGARNLARTLDALELPCDILVPAALELQITAENAPRIQAKIIAEGANGPTTP
                     EADEILHRRGVMVVPDIYINAGGVTVSYFEWLKNLEHVRFGRMEKRYDEAAFGRLVSA
                     MEGATGKRFSEAERRHLSAGADEEDLVSSGLEETMVTAWQAIRETRGRLGKEIDGRIA
                     AFVLAIDKIAVSYKDLGIFP"
     gene            complement(6528..6923)
                     /locus_tag="VGA78_08670"
     CDS             complement(6528..6923)
                     /locus_tag="VGA78_08670"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9893986.1"
                     /translation="MDPWIRNGLLTALVVLVPLSAVAQTADSLPPGVTREMVTKGKSV
                     FGGAGLCLACHGPDGKGSIGPDLTDREWLHGDGSYGALVKLITTGVDQKQSKTGQMMP
                     PKGGSAINEADLRAVTAYVWSLSRRAAGR"
     gene            complement(6893..8044)
                     /locus_tag="VGA78_08675"
     CDS             complement(6893..8044)
                     /locus_tag="VGA78_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893987.1"
                     /translation="MDSSPVLPSPSLAIPAFARRYRVSCQLCHNPIPKLTAFGEVFAG
                     NGYRFAAAEAPRDTIATGDSLLWLASGLPLGIRVDAYAQAYSRGRTSTDLQTPYLIKV
                     LSSGALSKSLSYYMYVNLLERGEFGGFEDAILIANDIAGLPVDASLGQFQVSDPLFKR
                     ELRLMFEDYAVYRARLGQEPANLTYDRGLMAAVDVLGFTLTGELLNGNGIGPADEERR
                     FDDNGFKNLAGHLTRDLTAFLRLGVFGYYGRTDAETGTNTIHMLGGDGTLSLGPLELN
                     GQYLHREDSDPRFTPGTGKVRLDGGFVEAVLRPPGSRWHAFGLWNRVSATAPVLDVRL
                     GGPADLTRYQTVSGGAGYLVLRNLRLSGELTRDLEQDATRWTLGFVTAF"
     gene            complement(8117..>9407)
                     /locus_tag="VGA78_08680"
     CDS             complement(8117..>9407)
                     /locus_tag="VGA78_08680"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEX9893988.1"
                     /translation="EAAMHRTKAIVTLLLAAVLAGCSGLLEQTAPSRVQEETLLTPSN
                     AKLLVDGARAAFGCAYHAYITGTGLVTDEMEDDQLAAAGWDYDRRSVVPILGTTYAEG
                     PCDAGQLFGVYRPMQVARYQADYAFQIVTGFPDAEVANKSTLLATASLYGAYAYLLLG
                     EAFCTCAVSAPEEILTSGGSAELQSSDMFTAAESRFTQAITLADGAGQSAIANAARVG
                     RARARLNLGKLAEAKADAQAVPAGFAFALPYNAATSYSQNLLFRRQRDFLLYGIAPPF
                     RDLTFGGVPDPRVAVTNTGLRGADAVSIVWVANKYTAQTSAIPLAKYQEAQLIIAEID
                     GGQTAVGIINALHTAAGLPAFASSDPAAILAQVIQERDRDLFLEGHRFWTIRRLNLAL
                     NPVAGTAYPIKGGNYGDMRCFPLPDIERTNNPKLRGT"
BASE COUNT         1620 a         3064 c         3140 g         1583 t
ORIGIN      
        1 gaatagggag cagggagcag ggagcaggga gcagggagca gggagcaggg agcagggagc
       61 agggagcagg gagcaggcac tgtctagacg gcgggctctt cactcccact ccttgctccc
      121 tccttcctgc ttcctgctcc ctcaacaacc ggggtatcga ttggaccgcc ccattcgctc
      181 caggagccat cgtacaatgc gtgcccactg tgccccagat gatcgaggac aaggagaagg
      241 gcacaggcgg tgaccccgga gccgcatgag gtcacgatgg gtcggtcgag gtcgatgccg
      301 gcagcgcgaa gccgcgccgt caggcgttcc cgatcgagca gccgcccatc cagcccgacc
      361 agctctggat agggaagatt gcggctgccg ggcatgtgac cggagcgaag tccgggcctg
      421 ggctccggtt cgcggccgga atatcggcct gccgagcggg catccaccac ctgctccgag
      481 ccggaaccga ggatggcccg cacctcgtcc agcgaccgca ccaagccggg acgatagcgg
      541 ggggtaaacc gcgccgggga ccggagcacc gggcccgatt ccaccggacg gccttcgtgc
      601 tgccaggtga tgaacccgcc gtcgagcacg gcgacccgat cgtgcccgaa gaccttgaac
      661 gtccaccagg cccgggccgc gctgagatta gcgcccgagc catcatacgt caccaccaaa
      721 tcgtcgtccc cgacccccag ctcgcccatc ttctcggcga aacgttccgg tgtgccgaac
      781 atatgaggca ggagtgagcc gggatcgctg atcgcgtcga ggtcgtagaa cagtgccccc
      841 ggaacgtgcg ccccgagata ttcccggcgg gggtcgcggc ccaggtgggc cagataccag
      901 gaggcatcga gcaccacgac gccgggttgg cgcaggttgg cctggagcca gtcgcccgat
      961 acgatcgggc ctagattagt gggcatgagg ttcgacaagc tcatcgctcg gttcagtggc
     1021 gccgaccgtg atacccggct cgaggccatg ctggatgcct cgcgcacgtt gcccgaggtg
     1081 ccggaacggc tgcgatcccg gatgagcgga ctgcaggtgc ccgagtgtca gacgcccgtg
     1141 tttctctggg tggagccgga agacggacgg ctccgtttcc atgccgaggt gcctcgcgac
     1201 tcgccgaccg tgcggggata cgtctcgctg ttgatccgaa ctctggatgg ggcgaccccg
     1261 gcggaggtgg agcaagtccc ggacgatctg ctggaccgcc tcaagctggt cgagaccctg
     1321 gggatgatcc ggatccaggg cctcacggcc gtcctgcgtc atctcaagcg cgccgctcga
     1381 actccttcat gaactgcacc agcgcttcga ccgcggcgcg aggacaggcg ttgtagatac
     1441 tggctcgcat cccgccggcc gaccggtggc ctttgagtcc gtcgagcccc gcctgggtgg
     1501 cctcggcgca gaacctcgcc tccagctctt ccgagggcgc ccggaagcac acattcatga
     1561 gcgagcggct gccggcatcg gcggtgccgc gccagaaatc cgtcgagtcg atcacgtcgt
     1621 acaccaggcg ggccttctcc gcgttgcgcc gggccatgcc gtccaacccg ccttcggcct
     1681 gtagccatcg gaacacttcg cccatcagat acaccccgaa ggtgttgggc gtgttgaaga
     1741 gcgatttctc cttggcgtgg acccgatact gcagaatgtt ggggagcgtg gacggcgccc
     1801 gctcgatcaa gtcttcccgg acgatcacca ggacgatacc cgatgggccg aggtttttct
     1861 gggccccggc gtagatcagt ccgtatttcg acacgtcgat cggacgactg aacatgtcgc
     1921 tggacgtgtc cgctaccagc ggggcggtcg cgggaacggg cggctcggag cgccactggg
     1981 tgccgtagat ggtgttgttg gtggtgagat gcacgtaggc cggatcgggc gagaaggcca
     2041 gctgatcggc ggacgggatg cggcgatact gctcggctgc tccgtcgaac gccgagtgaa
     2101 cctggcccac ctgcctggcc tccttgatcg ccttctgggc ccagatgccg gtgacgatgt
     2161 agtcggcgac ccggcccggc ggcagcaagt tcatcggcac catggcgaac tggagcgacg
     2221 cgccgccctg gaggaagagc accttgtagt tgcccgggat accggccagc tcgcgacagc
     2281 gcacctcggc ttccgcattg atggtctcat agaccttgcc gcgatgactg tgttcggcga
     2341 taccgacccc gctgccgcgg gtgttccaga gatcttcctg ggcctgccgc aggaccggct
     2401 cgggaaggac ggccggtccg gcgctgaagt tccagatccg gtcggacaag gctccgtcag
     2461 tcaatgggcc ggatttcggc actgaggatg tgcgggttgc cattcctgat ctcctgcatc
     2521 gattcgacgt tcggctcctg ggacaggtgg atccgtgcca gggtcgcctg agcgccgtgg
     2581 taaatgatgt tctcgacttc ctcgacattg atggccgcgc gactcagcac ggcgaaaacg
     2641 tgcgccagca ctccaggccg gttctgatgg cggatcgaga gcacgtgggt ggccgagctc
     2701 ttcgccagcc ggttgacgca gttggggacg ccgccggtgg actgatactc ctgcacgatg
     2761 cggatcactt catgggcgat cgccacctgg gcctgatcgg tggaggcgcc cacgtggtgg
     2821 gtcccgtaga ccccgggcaa ttcgatgagg ggtgggcgaa actccccgct gctgcccgag
     2881 ggctcttcct ggtaaacgtc caggcccacc cgaatgccct tctcgcggat ggcctccgcc
     2941 agggccgctt cgtccactac ggtcccgcga gccgtgttga tcaggtacga ccccggccgc
     3001 atcgccgcca gaaactccgg gttgaccagc tgccgggttt ccggcgtggc ggccacattg
     3061 atcgacacga tgtcgctctg gcgggccact tccagcggag tctggcagta cccgattgcc
     3121 atgcgggtgg aatcttcgat ggtgagctgc cgggaccacg ccaccacccg aagcccgaat
     3181 gcctgccctc gccgcgcgat ctcccggcct atctgcccca gtcccacaat gcccagggtt
     3241 cgaccatgca gcccccgggc cttggagtac tcgctcttgt tccacacgcc gcgccggaga
     3301 tcggccattt gatccgggat gcggcgatcg caggccagga tgagtcccat caccagctcc
     3361 gccacggcaa tgctgttctt cccggggcag ttggagacga acactcccag gcgggaagcg
     3421 gcatcgacgt cgatggtatc gatcccggcg ccggcccgga tgaccagccc gaggctgggg
     3481 ccggcctcga acgccggcgc acccactttc ttaccgcgaa cgatcaggac cttggggtca
     3541 aaaacccgaa gtccctcggg cagatccccg ggggccagat cgggctggta gagcacattg
     3601 cagttgagct cccgaagccc gtcgatcccg actttctcga acttgtccgc gaccaggact
     3661 ttcatcatag gacgggagac gggaggcgcg aggggggaga ctggaccggc tcgtccagac
     3721 tgtgcacgaa caggccgctc cggagcttgg gctcgaacca ggtggtcttg ggcggcatga
     3781 tctgacccgc gtccgacacc gccatcagct gctccacggt cactggatac aacgcgacgg
     3841 cgagcgccat ttcgcccgag tcgacccgtc gctgcaattc cggggtgccg cggatccctc
     3901 ccacgaaatc gacccggttg tcggtgcgga tgtcaccaat gccgagaatg ggaccgagga
     3961 tccgttcctc cagcaggacc gcatcgagcg agcggatggg atcgttggaa ggaatggtcg
     4021 cgcgatccag ggtcaggcga taccagcggc cgttgaggta ccagccgaag cttcccggac
     4081 cgggcggctc gggatcggcg accggctcca cccagcccac ctcgccgaga cgctccagga
     4141 actgctcggg ggagagccgg ttcagatccc gcactacccg gtggtacggc agaatccgga
     4201 gctggctggc cgggaagagc accgccagga accaggcgta ctcaccctcg gcgccgggtt
     4261 caccgtgctg ggcccgaatc tcttcgcccg cgcgccaggc gctggcgcag cgatggtggc
     4321 cgtcggcgac ataggcatgg ggcacggtgg caaacgcttc gacccaggga gcggtgtcgg
     4381 acgcttccca gacctggtgc cgaaccccgt ccggcgccat gaaatcgtac agcgccgggc
     4441 ctcgggtgcc ctgggccagc cgctgggcca gccgggggtc gtcgcggaac gtgaggaaca
     4501 ccggctcggc gttggcgttc agtgtcagga cgtgacgggt ccggtcatcc tctttgtcct
     4561 tccgggtctt ttcgtgcttc cggatcacgt cggccgcata gtcatcgatg tggacgcacc
     4621 ccaccacgcc cagctggctg cgcccatgca tggtcagctg atagaggtag aaggccggcc
     4681 gggcgtcatg caccaggacg ccatcccgca tcagccggtc gaggttcgac ctggcggtgg
     4741 cgtagacgcg ggggtcatgt gggtcgacgt cgggcgagag gtcgatatcc gagcgcccga
     4801 cgtgcagaaa actgagggga tttccctgcg ccagccgggc cgcttcatcg cgcgtgacca
     4861 cgtcataggg cggggatgcc acctgcgcgg cgagatcggg gcgcgggcgc caggcggaaa
     4921 acggcttgaa tcggatatcc ggctccttgc aaccagtcgc tggtaatgat tacgggaaga
     4981 tcccgaggtc tttataggag accgcgatct tgtcgatcgc caggacgaag gccgcgatcc
     5041 ggccgtcgat ctccttcccc agacggccgc gggtttcgcg gattgcctgc caggcggtaa
     5101 ccatggtctc ctccagcccg ctgctgacca ggtcttcctc gtcggcgccg gccgaaagat
     5161 gccggcgctc ggcctcggag aaccgcttgc cggtggcgcc ttccatcgcc gagaccagtc
     5221 gcccgaacgc agcttcgtca taccgcttct ccatgcgacc gaagcggacg tgctccagat
     5281 tcttgagcca ctcgaagtag gagacggtga caccaccggc gttgatgtag atgtcgggga
     5341 cgaccatgac gccgcgccgg tgaagaatct catcggcctc gggtgtggtg ggcccgttgg
     5401 caccttcggc gatgatcttg gcttgaatcc ggggggcgtt ttccgccgtg atctgcagct
     5461 cgagcgcggc cgggaccagg atatcgcagg gcagctccag ggcgtcgagg gttcgggcca
     5521 gattcctcgc tccgggaaag tgcagcagcg aaccggtggc cttgcgatgg gccatcacgg
     5581 cctccaggtc gagcccatcg gagttggcga tagcgccttc ccgctccgcc aatcccacca
     5641 gcacggcccc gccctgcgcg atgtagcagg ccgcatgata gcccacgttg cccaggccct
     5701 gtaccaccac gcgcttgccg gcgagcccgg tggagagtcc cagcgatttg agcagcgggc
     5761 catcggaaca gatctcccgc aggccgtaga agagacccag accggtggcc tgcacccggc
     5821 cgcggatgcc tccctgagcc agcggcttgg cggtgacgca agccagcgcg tccagctccc
     5881 cggggcgaag cgagctgtag gtatcggcga tccacgccat ttcccgggga ctggtcccgt
     5941 agtcgggcgc cgggacgtcc aggccggggc cgatgaagtt cttccggacc agctcgaagg
     6001 tgtagcggcg agtgatgcgc tcgagctcgc tggcggagta tttcgaggcg tcgatccgga
     6061 tgccgccctt ggccccgccg aacggcacgt cgacgatggc gcacttgtag ctcatgagcg
     6121 ccgccagcgc catgacttcg tcggcctgca cgtcgggagc gaaacgaatg ccgcccttgg
     6181 tcggaagctt gtgatgactg tgctgggccc gccagccctc gaccacctcc agcgtgccgt
     6241 cgtcccggcg caccggaaac gccaccgaca tgaccgcgtt gcagaccttg atctgacgca
     6301 ggagagtcgc attgtgcccg gtgtgactgg ccgcctggtc gaagatccgg ttgacctggt
     6361 cgaggaagct cacgggggcc atggaatcgg gctccggaaa cggggctgga atctacctcc
     6421 ggcgaggcca attgacgatt gacgattgac gattgacgat ggagaattgt gcccttggat
     6481 ctccctgcac caattgtcaa ccgtcaatag tcaatcatca atgctgttca gcgcccagct
     6541 gccctccgac tgaggctcca cacatacgcc gttaccgccc gcaggtctgc ctcgttgatg
     6601 gccgagccgc ccttgggcgg catcatctgc ccggtcttcg attgcttctg gtcaacgccg
     6661 gtggtgatca gcttgacgag ggcgccatag ctgccgtcgc catggagcca ttcccgatcg
     6721 gtgagatccg gcccaatgct gcccttccca tcgggtccgt gacaggcaag gcataatccg
     6781 gcgccaccga agacgctctt ccctttggtc accatttccc tggtaacgcc gggcggcagc
     6841 gagtccgccg tctgggcgac ggcggaaagc ggcaccagta ctaccagcgc ggtcagaagg
     6901 ccgttacgaa tccaagggtc catcgcgtcg catcctgttc caggtcccgg gtgagctcgc
     6961 cggacaggcg aagattccgc aacacaaggt aaccggcgcc accactcacc gtctggtagc
     7021 gggtcagatc cgccgggccg cccagtctca cgtcgagcac cggggcggtc gctgagaccc
     7081 ggttccacaa accaaaggcg tgccagcggc ttcccggggg acgcagcacg gcctccacga
     7141 atccaccatc cagcctcacc ttgccggtgc ccggtgtgaa gcgggggtcg ctgtcctctc
     7201 gatggagata ttgcccgttc agctccagcg gccccaggct cagcgtgcca tcgcccccga
     7261 gcatatggat ggtgttggtt ccggtctcgg cgtcggtccg accgtaatag ccgaaaaccc
     7321 caagacgcag gaatgccgtc agatcgcggg tcagatgccc ggccaggttc ttgaagccgt
     7381 tgtcgtcgaa gcgacgctcc tcgtcggcgg ggccgatccc gtttccgttc agcagctctc
     7441 cggtcagggt gaagcccagc acgtcgaccg cagccatcag gccgcgatcg taggtcaggt
     7501 tggccggctc ctggcccaga cgagctcggt acacggcgta gtcttcgaac atgagccgga
     7561 gctcgcgctt gaacagcgga tcggagacct ggaactggcc cagcgacgcg tcgaccggca
     7621 gcccagcaat gtcattggcg atcaggatgg cgtcttcgaa cccgccgaat tcgccccgtt
     7681 ccaacagatt gacatacatg taatacgaaa gggacttcga cagcgcaccg ctcgacaaca
     7741 ccttgatgag gtacggcgtc tggaggtcgg tgctggtccg gcccctggaa taggcctggg
     7801 cataggcatc gacccggatg cccaacggca ggccgctggc gagccacagc agggaatcac
     7861 cggtggcaat ggtatcgcga ggggcttcgg cggcggcgaa gcgatagccg ttgccggcga
     7921 acacctcgcc gaaggcggtc aacttcggga tgggattgtg gcacagctgg cagctgaccc
     7981 ggtagcggcg ggcaaacgcc gggatcgcca gcgaagggga cggaaggact ggtgaagagt
     8041 ccatgaaccg cgttacaaac aaagagggag cgggactttc cgctccctct tcgtcagcgc
     8101 gacaactggg gccgaatcag gtgccgcgca acttcgggtt attggtgcgt tcgatgtccg
     8161 gcagtgggaa gcaccgcatg tccccgtaat tgccgccctt gatcgggtag gccgtcccgg
     8221 caaccgggtt gagcgcgaga ttcaggcggc gaatggtcca gaatcggtgt ccttcgagga
     8281 acagatcccg atcccgttcc tgaatcacct gagccagaat cgcggccggg tcgctgctgg
     8341 cgaaagcggg gagccccgcc gccgtgtgca gcgcgttgat gattcctacc gctgtctgcc
     8401 ccccatcgat ctcggcgatg atcagctggg cctcctggta cttggccagg gggatggctg
     8461 aggtctgggc cgtgtacttg ttggccaccc agacgatcga gacggcgtcg gcaccccgga
     8521 ggccggtgtt ggtaactgcc acgcggggat cgggaacgcc accgaacgtc agatcgcgga
     8581 acggcggcgc gatgccgtaa agcaggaagt ccctctggcg ccggaagagc aggttctggg
     8641 aataactggt cgccgcgtta taggggagcg cgaacgcgaa tcccgccggc acggcctgcg
     8701 cgtcggcctt ggcctcggcc agtttgccca ggttgagccg cgcccgggcc cggcctaccc
     8761 gggcggcgtt ggcgatggcg ctctgtcccg ccccgtccgc cagagtgatc gcctgggtaa
     8821 accgagactc ggctgcggtg aacatgtcgg acgattgcag ctccgcgctc ccgcccgagg
     8881 tgaggatctc ctccggggcg ctgaccgcgc aggtgcagaa ggcctccccc agcaggaggt
     8941 aggcataggc cccgtataga gaggccgtgg ccagcagggt cgacttgttc gcgacctctg
     9001 catcagggaa acccgtgaca atctggaagg cgtaatcggc ctggtatcgg gccacctgca
     9061 tgggccggta gaccccgaag agctggccgg cgtcgcaggg accctcggcg taggtggtgc
     9121 cgaggattgg aactacgctg cggcggtcgt aatcccaccc cgccgccgcc agctggtcgt
     9181 cttccatctc gtcggtcacc agcccggtgc cggtgatgta ggcgtggtag gcgcagccaa
     9241 aggcggcgcg ggcgccgtcg accagcagct tggcgttgga aggtgtgagc agcgtctcct
     9301 cctgcacccg gctcggtgcg gtctgctcca gcaatccact gcagcccgcc aggaccgccg
     9361 cgagcaggag cgtcacaatg gctttcgtcc tgtgcatggc cgcctca
//
LOCUS       DASWKS010000302         3804 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2742168, whole genome shotgun sequence.
ACCESSION   DASWKS010000302 DASWKS010000000
VERSION     DASWKS010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2742168"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VGA78_08685"
     CDS             <1..739
                     /locus_tag="VGA78_08685"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX9893989.1"
                     /translation="ILRRLVGGPWTGYPKRRLERAVLIRTKRDIYRDRRPVAERYFDA
                     ARELDVTSDGGPPEVFVSMESSARADEFLRENRLGNERTLVALVPGAAHATKEWPEHH
                     WITLVALVAEQRVDLVILGGTKEAGLGARLAAIAGPHAASAAGHFDIGGTAAVLKRAR
                     CAIAGDTGVMHLATAVGTPVVALLGPTVGAFGFLPYHARATVLERDLPCRPCTKMGGP
                     VCPLGHHHCLELITPAEVSDALRRLPQ"
     gene            736..1107
                     /locus_tag="VGA78_08690"
     CDS             736..1107
                     /locus_tag="VGA78_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893990.1"
                     /translation="MKRPPDSARVLLTLLAEAERGPRRDGTFAVWLTLRVAVDVADQS
                     GWTERAHRKRLQAVEGRLTSLSLPSPLRRALAGTLAQLWSLTPEAAGLALTHLVAPVR
                     ESLGADAAEAVRRVAVSLRGR"
     gene            1207..1956
                     /locus_tag="VGA78_08695"
     CDS             1207..1956
                     /locus_tag="VGA78_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX9893991.1"
                     /translation="MAGHSKWAQIKRKKAVTDARRASHWTKLIREITVSARQGGGDPN
                     GNPRLRLAVDAARAANMPNDNIDRAIKKGTGELEGATYEEVHYEGYGPGGTAIFIETV
                     TDNPNRTVAEIRHVFSRKGGNLGASNSVAWMFDRKGQIYLDATKSGEDQTLEDALEAG
                     AEDFTREGDQYVVTAAPAAFHAVQDALKARGYHAVTAELAMVPRNTVKVEGAEADRLL
                     KLIDALEELDDVSKVFANFDIDASQLAEAEA"
     gene            1976..2476
                     /gene="ruvC"
                     /locus_tag="VGA78_08700"
     CDS             1976..2476
                     /gene="ruvC"
                     /locus_tag="VGA78_08700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX9893992.1"
                     /translation="MVLGVDPGTAITGFGVVATAPGRMGRLVECGVLRTRPADDLPAR
                     LLTIHQGLTELLARHRPDVVAVEGVFYGSNARTTVVLGHARGVILLAAAEAGIPVEEY
                     SPAMIKKAVVGRGAALKPQVGFMVARLLHLRAPPRPADAADGVAVALTHVLLARRPRP
                     LIRPAR"
     gene            2473..3075
                     /gene="ruvA"
                     /locus_tag="VGA78_08705"
     CDS             2473..3075
                     /gene="ruvA"
                     /locus_tag="VGA78_08705"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEX9893993.1"
                     /translation="MIASVTGVLVEKAPDAIVLQTEGGVGYEIAVPLGVFERLPQVGA
                     RLSLHTALVVKEDGWLLFGFDTVAERNVFQRLLSASGFGPKLAIALLSSLGPDRTVRS
                     IRERDLAALGTVSGIGRKKAERLVLELQDRFTDVVLDSAPRGPRGGIEAVRALENLGY
                     PAAAAEAAVRQVLDAEPGAETAHVVRAALKQLMSSRGGRP"
     gene            3072..3236
                     /locus_tag="VGA78_08710"
     CDS             3072..3236
                     /locus_tag="VGA78_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893994.1"
                     /translation="MKVTAEWQCTRCASTNRKLVEAGQKEVADICLSCHQKHIVTPAT
                     RPVRWTARAA"
     gene            3253..>3804
                     /locus_tag="VGA78_08715"
     CDS             3253..>3804
                     /locus_tag="VGA78_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9893995.1"
                     /translation="MSRVEITTPDVLPDERGTESALRPSRLDEFVGQEQVKTSLQIAI
                     DAARARGEPLDHTLFFGPPGLGKTTLAMLMAKEMGVQCRTTSGPVLEKPGDLVGLLTS
                     LAPGDVLFIDEIHRLRPVLEEFLYPAMEDFRVDVRISEGPNAQTLPMALERFTLVGAT
                     TRYGQLTPPMRARFGLVERLNFYP"
BASE COUNT          594 a         1276 c         1354 g          580 t
ORIGIN      
        1 gatcctgcgc cgcctggtgg gcggaccctg gaccggctat cccaagcgtc ggctggagcg
       61 agcggttctg attcgaacca agcgggacat ttaccgcgac cggcggccgg tggccgagcg
      121 gtacttcgat gcggcgcggg agctcgacgt cacgtccgac ggcggcccgc cggaggtctt
      181 cgtgtcgatg gagtccagcg cgcgggcgga cgagtttctc cgggagaacc ggctgggaaa
      241 cgagcggacg ctggtggccc tggttccggg cgcggctcac gccaccaagg aatggccgga
      301 gcaccactgg atcaccctgg tcgccctggt ggcggagcag cgggtcgacc tggtgatcct
      361 gggtgggacc aaggaggccg ggttgggtgc acggctcgcc gccattgccg ggccacacgc
      421 ggccagcgcg gcggggcatt tcgatatcgg aggaaccgcc gcggtgctca agcgggcccg
      481 ctgcgccatt gccggcgata ccggcgtgat gcacctcgcc accgcggtcg gaaccccggt
      541 ggtggcgctg ctcggtccga cggtcggggc cttcgggttt ctgccctatc acgcccgcgc
      601 caccgtgctg gaacgggacc tgccctgccg tccctgcacc aaaatgggcg ggccggtctg
      661 tcccctgggg catcaccact gtctggagct gatcacgccg gcggaggtga gcgacgcgtt
      721 gcgccggctg ccgcaatgaa gcgtccgccc gattcggcgc gggtcctgct cacgcttctg
      781 gccgaggcgg agcgcggacc ccggcgggac ggcaccttcg cggtctggct cacccttcgg
      841 gtcgcggtcg atgtcgcgga ccagtcgggc tggaccgaac gggcccatcg caagcggctg
      901 caggcggtgg aagggcgctt gaccagcctc agcctgccgt ccccgttgcg ccgggcgctg
      961 gccggaaccc tggcgcagct ctggagcctg accccggaag ccgccggcct ggcgctcact
     1021 catctggtgg cgccggtgcg agaaagcctg ggtgcggacg cggcggaagc ggtccggcgc
     1081 gttgctgtaa gcctgcgtgg gcgataactt tacgtggttg ccagtggtca gtcatcggtc
     1141 accgacgctg acggctccac ctggcggctg atgactgacg actgatgacc tcgggagttc
     1201 ccccgcatgg ccggccactc caagtgggcc cagatcaagc gcaagaaggc ggtgaccgac
     1261 gcccggcggg cctcgcactg gaccaagctc atccgggaaa tcacggtctc ggcccggcag
     1321 ggcggtggcg atcccaacgg caatccccgc ctccggctgg cggtggatgc cgcccgggcg
     1381 gccaacatgc ctaacgacaa catcgatcgg gcgatcaaga agggcaccgg cgagctggaa
     1441 ggtgccacgt acgaagaggt ccactacgag gggtacggcc cgggcggcac cgcgattttc
     1501 atcgagaccg tcaccgacaa tcccaatcgt accgtcgctg aaatccgcca cgtgttcagc
     1561 cggaagggcg gcaatctcgg cgcgagcaac tcggtggcct ggatgttcga ccgcaagggg
     1621 cagatctacc tcgatgccac caagtcgggc gaggatcaga ccctggagga cgcgctggaa
     1681 gcgggagccg aggactttac gcgggaaggc gatcaatacg tggtcacggc cgcgccggcc
     1741 gcattccatg cggtgcagga cgcgctcaag gcgcgcggct accatgcggt caccgccgaa
     1801 ctggcgatgg taccgcgcaa caccgtcaag gtcgagggag ccgaggccga ccggctcctc
     1861 aaattgatcg acgcgctgga ggagctggac gacgtgtcga aagtcttcgc caactttgac
     1921 atcgacgctt ctcagctggc cgaagcggag gcctgattcc ctacgtgccc gcgtgatggt
     1981 tctcggcgtc gatcccggca cggccatcac cggcttcggc gtcgtggcca ctgcgccggg
     2041 gcggatgggt cgtctggtgg agtgcggcgt gctgcgcacc cggccggctg atgaccttcc
     2101 cgcccggctc ctgaccattc accaaggact gaccgagctg ctcgcccggc atcgccccga
     2161 cgtcgtggcg gtggaaggag tcttttacgg ttccaacgcc cggaccaccg tggtgttggg
     2221 tcacgcccgg ggagtgattc tcctggccgc ggcggaggcc ggcatcccgg tcgaggaata
     2281 ctcacccgcg atgatcaaga aggccgtcgt gggccgcggc gcggccctca agccccaggt
     2341 cggcttcatg gtggctcggc tgctccacct cagggcgcca ccccgcccgg cggatgcggc
     2401 ggacggagtc gcggtggccc tcacccacgt tctgctggcg cgccggcccc ggccgctgat
     2461 ccgtccggcg cgatgatcgc cagcgtgact ggggtgctgg tcgagaaggc gcccgacgcc
     2521 atcgtgctgc agaccgaagg cggggtcggc tacgagatcg cggtgccgct cggcgtcttc
     2581 gagcggctgc cgcaggtcgg cgcccgcttg agcctgcaca ccgccctggt ggtaaaggag
     2641 gacgggtggc tgctcttcgg cttcgacacg gtggccgaac ggaacgtgtt tcagcggctg
     2701 ctcagcgcca gcggcttcgg gcccaaactc gccatcgccc tgctctccag tctgggaccg
     2761 gatcggacgg tgcggagtat ccgcgaacgc gatctcgccg cgctcggtac cgtgagtgga
     2821 atcggccgca agaaagccga gcgattggtc ctggagctgc aggaccgctt caccgacgtg
     2881 gtgctagatt ccgccccgag aggcccgcgc ggcggtatcg aagccgtccg ggcgctggag
     2941 aatctgggct acccggccgc ggccgccgaa gcggcggtcc ggcaggtgct cgacgccgag
     3001 cccggcgccg agaccgccca cgtggttcgc gcggccctga agcagctcat gagctcgagg
     3061 ggagggcggc cgtgaaggtc accgccgaat ggcagtgtac ccggtgcgcc agcaccaacc
     3121 gcaagttggt ggaagcggga cagaaagagg tcgccgacat ctgcctgtcc tgccatcaga
     3181 aacacatcgt gacgcccgcc acccgtccgg tgcgctggac cgcgcgcgcc gcgtgaggga
     3241 ggatccgggt cgatgagccg agtggagatc acgacaccgg acgtgctgcc cgacgaacgc
     3301 gggacggaga gcgcgcttcg cccgtctcgg ctggatgagt tcgtgggaca ggagcaggtc
     3361 aagacctcgc tccagatcgc gatcgatgcc gccagggccc ggggcgaacc cctcgatcac
     3421 acgctctttt tcgggccgcc cggactgggc aagaccaccc tcgccatgct catggcgaag
     3481 gagatgggag tgcagtgccg gaccacctcg ggcccggtgc tggagaagcc gggtgacctg
     3541 gtggggctcc tcaccagcct ggccccgggc gacgtgctgt tcatcgacga gatccaccgg
     3601 cttcgtccgg tgctggaaga gtttctctat cccgcgatgg aggatttccg ggtcgacgtc
     3661 cggatcagcg agggccccaa cgctcaaacc ctgcccatgg ccctggagcg attcactctg
     3721 gtgggcgcga ccacccgcta cggccagctc acgccgccga tgcgggctcg cttcggcctg
     3781 gtcgagcggc tcaacttcta cccg
//
LOCUS       DASWKS010000303         3794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2016558, whole genome shotgun sequence.
ACCESSION   DASWKS010000303 DASWKS010000000
VERSION     DASWKS010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016558"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            279..1940
                     /locus_tag="VGA78_08720"
     CDS             279..1940
                     /locus_tag="VGA78_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893996.1"
                     /translation="MRWVPTVIGRALAAAAALWSMSCDGGTEPELGTLEIVITTSGGD
                     PDLDGYRLIVDGGAPTAAGPVGLFTTITLVDLPTGPHTVVLEGYDTNCDLSRAPLNPV
                     TVTANTTTRVEFEVRCYATGIMVMARTTGLDYDSNGYAVRIGTHPPERVGATGSLIRG
                     RLTPGAYTVEVSDLAENCRHEGEASRTVEVSFRTLTSVTFSFVCVATTGIVEVSATTS
                     GEDHDPDGYVAQLGSSPTVSFMPLTPVARFHQVPAGTHSAALSGLAPNCRVVDQNPKS
                     IQVTAGGLIRDTVRTSFEVSCLRTEKIAFERDLGIYVAYSDGSHPIQIATGREGPSWS
                     PDGTELVFHGVECSWYYYYDQSCLDAGLFVVGVDGAGFRELTDVQSDRNPAWSPDGSR
                     VAFDRDGRLRWIGADGASSSVLSLPVVSASDPTWSPDGTRLAFTCLLDAGNDDICVAN
                     LDGTGFLRLTSHPGKDHQPAWSPDGTRLVFTTTRFGHVGSMALMALDGSDIVEVVLGA
                     EPAWSRDGARLVFVRPLGGLSTVNSDGTGLTNITFRSDRGPAWRP"
     gene            1966..2376
                     /locus_tag="VGA78_08725"
     CDS             1966..2376
                     /locus_tag="VGA78_08725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9893997.1"
                     /translation="MRLTGAVAAFALVGGSCDSSGSEMVAPGPGTLIVLIASTGTPDL
                     DGYRLTVDDGEPIPVDWNDQVEIPGLAAGSHTVELTGLDDPCVLNGPPARSVNIPGNG
                     IVYSHFVVTCGWPCYYEYPYCVRLGGHHAPALRP"
     gene            2354..3760
                     /locus_tag="VGA78_08730"
     CDS             2354..3760
                     /locus_tag="VGA78_08730"
                     /inference="COORDINATES: protein motif:HMM:NF017722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HEX9893998.1"
                     /translation="MHLRFGRSPVLPAALLTLVGCGTDDPVSPSCREPEILASSVAAI
                     PGNGLGAVGTVRTRFADSVSLQYGLAGGARDEATPAVAATAEVVAVPALGLVPERQYS
                     LQAVAYGGCGSATGPALGFTTGALPADLPSYTAGGPDPSPGYVVFGAGGYGLVIDNTG
                     RVVWYHRFPRGPGLNFQAQPNGHFVARPPPASPAEPAPFLEIDPLGNVTRTFGCGRGL
                     PPRFHDLIVEASGSYWLMCDETRTMDLSAMGGVTSARVMGTAVQHVNVDGSLLFEWSP
                     FDHFALSDLNPADRTGASVNWTHGNAIDLDGDGNLLVSFRSLHEITKIDTRTGLVRWR
                     MGGLANQFDFQDTPLPAFTGQHGLRVTGPGRMVLLDNLGDPSGSRAERYEFDEAGRTV
                     RLVGAYGGSAHVVAELGGTTQELPGGRVLVSYGNGARVEEYDSAGNVVWRIQGNSGYV
                     FRAQRIRSLYHPGVGGPR"
BASE COUNT          590 a         1282 c         1284 g          638 t
ORIGIN      
        1 ctccaggatc cctagcccag gagcccggcg ccccacgaat gagacccctc tcatcgttag
       61 ggtgacttcg cgccgctacg ctccgtcgag gtatgcggcg cgcgggtgac atgacgccgc
      121 ggcatagtcg ttccgcacgg ctcgaccaac aaacgaatcg gcattcagat cgtccagact
      181 cattttggcg ccggtgtacc gtgtcgggtt tgggcccgag tcctcgttta ccagtggaag
      241 gctaacggtt cgagagacag gggcaggagg atccggcaat gaggtgggtc ccgacagtca
      301 tcggcagggc cctggcggct gccgccgcgc tctggtcgat gtcgtgcgat ggaggcaccg
      361 agcccgagct cggaaccctc gagatcgtca tcaccaccag cggcggcgac ccggacctcg
      421 acggttaccg cctgatcgtc gacggcggag ctccgacggc ggcaggcccg gtagggctgt
      481 tcaccaccat cacgctcgtg gacctgccca cgggaccgca tacggtcgtg ctggaaggct
      541 acgacaccaa ctgcgacctg agccgggccc cgctcaaccc ggttaccgtg acggcgaaca
      601 ccaccacccg ggtcgagttc gaggtgcggt gctatgccac cggtatcatg gtcatggccc
      661 gcaccacggg tctcgattac gactccaacg ggtacgcggt ccggatcggt acccatcctc
      721 ctgaacgggt cggcgccacc ggttcgttga ttcggggccg cctgactccg ggagcctaca
      781 ccgtggaggt gagcgacctg gccgagaact gccggcacga aggggaggcc tcccgcaccg
      841 tcgaggtatc gtttcgcacg ctcaccagcg tgaccttcag ctttgtctgc gtcgcgacga
      901 ccggaatagt ggaagtgagc gccaccacct cgggggagga tcacgacccg gacggctatg
      961 tggctcagct ggggagctcg ccgaccgtca gcttcatgcc actcacgccc gtggcgcggt
     1021 ttcaccaggt tcccgccggt acccacagcg cggcgctgtc cgggctggcg cccaattgcc
     1081 gggtcgtgga ccagaatccg aagagcatcc aggtgacggc aggcggactg atccgggata
     1141 cggtccggac cagtttcgag gtgagctgcc ttcggaccga gaagatcgcc ttcgagcgcg
     1201 acctggggat atatgtggca tactcggatg gatcgcaccc gattcagatc gctaccggcc
     1261 gtgagggacc gtcctggtct cccgatggga ccgagctcgt ctttcatggg gtggagtgct
     1321 cctggtacta ctactacgac cagtcctgcc tcgatgccgg cctgttcgtg gtcggggtgg
     1381 acggtgccgg tttccgtgag ctgaccgacg tgcaatccga tcgcaatccc gcctggagtc
     1441 ctgacggctc cagagtcgcc ttcgatcgcg acggccgact ccgctggatt ggggcggacg
     1501 gtgcctccag cagcgtgctc agcctgccgg tagtctccgc ctcggatccg acctggtcgc
     1561 ccgacgggac ccggttggcc ttcacctgcc tgctggacgc cggcaacgat gacatctgtg
     1621 tcgcgaacct cgacggaacc ggcttccttc gcctgaccag tcatcccggc aaagaccacc
     1681 aaccggcctg gagcccggac ggcacccggc tcgtgttcac caccacgcgg ttcggccacg
     1741 tcggatcgat ggctctcatg gccttggacg gcagtgacat cgtcgaggtg gtcctgggag
     1801 ccgagcctgc ctggtcccgc gacggcgcga gactggtgtt cgtccggccc ctcggcggtc
     1861 tctcgaccgt caactcggac ggcaccggcc tgaccaacat cacgttccga tctgaccggg
     1921 ggcccgcgtg gcggccgtag cgtggtgcgc cggaggagac tctccatgcg actgacggga
     1981 gcagtggcag ccttcgcctt ggtcggcggt tcctgcgaca gcagcgggtc cgaaatggtg
     2041 gcgcccggac caggaacgct gatcgtgttg atcgcgtcaa ccggtacgcc cgacctcgat
     2101 ggataccggt tgacggtcga cgacggagag ccgataccgg ttgactggaa tgaccaggtg
     2161 gagatcccgg gtctggcggc cggtagccac acggtggagc tcaccgggct cgacgacccg
     2221 tgcgtgttga acggcccccc ggcccgctcg gtcaacatcc cgggcaacgg catcgtctac
     2281 tcccacttcg tcgttacctg cggttggccc tgctattacg aataccccta ctgcgtcagg
     2341 ctcggcggtc accatgcacc tgcgcttcgg ccgtagcccg gttctcccgg cggcgctgct
     2401 caccctggtc gggtgcggca ccgacgaccc ggtctccccc tcgtgccgcg agccggagat
     2461 cctggcgagc tccgttgcgg ccatcccggg caacgggctc ggcgccgtcg gcaccgtgcg
     2521 aacgcgattc gccgacagcg tgtcgctcca gtacggcctg gcgggtggcg cgcgggacga
     2581 ggcgactccc gctgtcgcag ccaccgcgga ggtggtcgcg gtcccggcgc tgggactggt
     2641 ccccgagcgg cagtactcgc tgcaggccgt ggcgtacggc ggttgcggca gtgcaaccgg
     2701 gccggcgctc gggttcacta ccggcgcgtt gccagccgac ctgccgagct ataccgcggg
     2761 cggaccggac ccgagtcccg gctatgtggt cttcggcgcc ggcgggtatg gcctggtgat
     2821 cgacaacacc ggccgggtgg tctggtacca ccgcttcccg agaggacccg gcctcaactt
     2881 ccaggcccag cctaacgggc atttcgtggc ccgcccgccg ccggcatctc ccgccgagcc
     2941 ggccccgttc ctggaaatcg acccgctggg caacgtgacc cgcacgttcg ggtgcggccg
     3001 gggtctccca ccgcgcttcc acgacctcat cgtcgaagcg agcggatcct actggctgat
     3061 gtgcgacgag acccggacca tggacctgtc ggccatgggc ggcgtgacga gcgcgcgggt
     3121 gatgggaacc gcggtccagc acgtgaatgt cgacggcagc ctgctgttcg agtggagccc
     3181 gttcgaccac ttcgcgctgt cggacctcaa cccggcggat cggaccggcg ccagcgtcaa
     3241 ctggacccac gggaacgcga tcgacctcga cggcgacggc aacctcctgg tgtcgttccg
     3301 gagtctgcac gagatcacca agatcgacac ccggaccggc ctggtgcggt ggcgaatggg
     3361 cggtctcgcc aaccagttcg atttccagga taccccgctc cccgccttca ccggacaaca
     3421 cgggctccgg gtgacgggcc ccggacggat ggtgctgctc gacaacctgg gcgatccctc
     3481 gggcagccgg gcggagcgct acgagttcga tgaggccggc cggaccgttc gcctggtggg
     3541 cgcctatggt gggagcgccc atgtcgtagc cgagctgggt ggcactaccc aggagctgcc
     3601 cggagggcgc gttctggtgt cgtacggaaa cggagctcgg gtcgaagagt acgattccgc
     3661 cggcaatgtc gtctggcgga tccagggcaa ctccggctac gtgttccggg ctcagcggat
     3721 tcggtcgctg tatcatccgg gcgtgggagg accgcggtag gtactgccgt cgaaggcggt
     3781 cgaaggcggt cgaa
//
LOCUS       DASWKS010000304         4532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_144035, whole genome shotgun sequence.
ACCESSION   DASWKS010000304 DASWKS010000000
VERSION     DASWKS010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144035"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..958)
                     /locus_tag="VGA78_08735"
     CDS             complement(<1..958)
                     /locus_tag="VGA78_08735"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX9893999.1"
                     /translation="MANTDYYHVLGISESAKAEEIKKAYRRLAKQYHPDANPNNPQAA
                     ERFKQISEAHAVLSDPEKRKKYDMMRKLGAFDPRTRTGAGSSADWARSAPGGGESFDF
                     GDMGGLGDLFSSIFGRGKREDRRGETIETTLTVDFRTAVLGGKVPITVPITDTCATCG
                     GNGAAPGATLTTCAECKGRGSISFGQGGFAVNRPCPACRGRGKIPSVKCPECAGAGQV
                     RAERKLMLTVPAGSDNGTKIRLKGQGEPGPAGGAPGDLLVTLQVEPDRFFTRHGLDLE
                     CEIPLNLAQAMLGTQVRVRTVEGKKILLKIAPGTQPGRRLRIK"
     gene            complement(966..1469)
                     /gene="grpE"
                     /locus_tag="VGA78_08740"
     CDS             complement(966..1469)
                     /gene="grpE"
                     /locus_tag="VGA78_08740"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX9894000.1"
                     /translation="MPSGAVSGVPAEPSENAVARLEDQLGEAQDRHLRLAAEYDNFRK
                     RVARERVELTDRAQAALVLKLLDVLDDLDRLAAQDLSATGSDALHEALVLVDRKLRKE
                     LVAAGLERIEPIGQPFNPAEHEAVSVVAAPDAALDHQVSAVFQAGYRFKGALVRPARV
                     QVYSSEG"
     gene            complement(1650..2906)
                     /locus_tag="VGA78_08745"
     CDS             complement(1650..2906)
                     /locus_tag="VGA78_08745"
                     /inference="COORDINATES: protein motif:HMM:NF001813.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEX9894001.1"
                     /translation="MDLEVVTIGTELLLGFTVDTNGAELGQALAAIGATIVRRTAVAD
                     EAGAIRAAVGEALGRTGIVITTGGLGPTRDDLSKQVVADLYGWPLRFDEAIWQALVDR
                     FRRMGRDPSPANRVQAEVPEGATVLTNRWGTAPALWLDGPPGLVIMLPGVPNEMRKLL
                     QHEVVPRLGARGAAAAGRVVRSRLLRTTSIPESSLAQRIGDLEDGLQPLTLAYLPGVH
                     GVDLRLTAWQVDSDQADRLLNAGAARLRELLGPLVYGEGDTDLATVLLDAMRARGLRL
                     AVGESCTGGLLGVRVTAISGSSDVFAGSAVCYHNAAKATLLSVAPALLEAHGAVSQEV
                     AAAMARGAASRFGVEVAIGLTGIAGPSGGTEAKPVGTVCFGWVVRDRLESARYVFLGN
                     RREIRERAAQFALHRLWRLLVEHPVS"
     gene            complement(2912..3559)
                     /gene="pgsA"
                     /locus_tag="VGA78_08750"
     CDS             complement(2912..3559)
                     /gene="pgsA"
                     /locus_tag="VGA78_08750"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX9894002.1"
                     /translation="MWTLPNIITLARILITPVIALLPFIEGYTPKFICFVVFLVAAIS
                     DVYDGRLARSRNQITDLGKLLDPVADKLLLLATLIPIYWISQERQDLYGIPVWGSIPL
                     WVCLLLLGREFAMTVFRWWAQKRGVVIAAHGPGKLKAAFQNIFIGATIAWFAFRNAMK
                     PLGWDSPFARFWTDFHGGFVAVTLAVAVVLTIWSFIVYIHRYRDLFSNSSASTSR"
     gene            complement(3565..4239)
                     /locus_tag="VGA78_08755"
     CDS             complement(3565..4239)
                     /locus_tag="VGA78_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HEX9894003.1"
                     /translation="MSLINYASREINCKLVYYGPGLGGKTTNLEYVYEKVAPTAKGKL
                     ISLATETERTLFFDFLPVDLGTIRGFKTRFHLYTVPGQVYYNASRKLILKGVDGVVFV
                     ADSQLERMEANLESMQNLYDNMAQHGYDLTKMPFVVQYNKRDLPNAAPIPELQEALNP
                     GWPVEEPARQRAFPDPDRPGDLLVRQVDGGWVERVPYFEGVAVQGVGVFDTLRAISKK
                     VLKALG"
     gene            complement(4253..>4532)
                     /locus_tag="VGA78_08760"
     CDS             complement(4253..>4532)
                     /locus_tag="VGA78_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEX9894004.1"
                     /translation="ARMLGEAEFGSLFHQGERESLYLADVARRVILVVLFDNRTTLGL
                     VKLRVRRAVVDLSTLFEELFSRGGQTTTVEAGFVGEAEDEIDRLFGAM"
BASE COUNT          754 a         1574 c         1484 g          720 t
ORIGIN      
        1 ccttgatccg cagcctgcgg cccggctggg ttccgggcgc gatcttgagc aggatcttct
       61 ttccctccac cgtccggacc cggacctggg tcccgagcat cgcctgcgcc aagttgagcg
      121 gaatctcgca ctccagatcg aggccgtgcc gggtaaagaa ccgatcgggc tcgacctgca
      181 gggtcaccag caggtcgccg ggagccccgc cggcgggccc cggctcaccc tgacccttga
      241 ggcggatctt ggtgccgttg tcgctcccgg ccggcaccgt cagcatcagc ttgcgctcgg
      301 ctcgcacctg tcccgctccg gcgcattcgg gacatttcac ggaggggatc ttcccccgtc
      361 cccggcaggc cgggcagggg cggttcaccg cgaatccacc ctgaccgaac gaaatgctgc
      421 cgcggccctt gcattcggcg caggtggtga gggtggcgcc gggtgccgcg ccgttgccgc
      481 cgcaggtggc gcaggtatcg gtgatgggaa ccgtgatagg caccttcccg cccagcacgg
      541 ccgtacgaaa gtccaccgtg agagtggtct cgatggtctc gccccgccga tcctcccgct
      601 ttccccgccc gaagatcgac gagaacaggt cgcccagtcc gcccatgtcg ccgaagtcga
      661 aggattcccc gccgccgggc gccgagcggg cccagtcggc cgagctgccg gccccggtgc
      721 gggtccgggg atcgaacgca ccgagcttgc gcatcatgtc gtacttcttg cgcttctccg
      781 gatccgacaa cacggcatgc gcctcggaga tctgcttgaa tcgctccgcg gcctgcgggt
      841 tgttgggatt ggcgtcgggg tggtactgct tggccaggcg gcggtatgcc ttcttgatct
      901 cctcggcctt ggcggactcg gaaataccca gcacgtgata gtagtccgta ttcgccacgt
      961 gaggctcagc cctcgctgga gtagacctgc acccgggccg gccgcaccag cgcgcccttg
     1021 aaacggtacc ccgcctggaa cacggcgctg acctgatgat ccagcgccgc atccggcgcc
     1081 gcaaccaccg agacggcttc gtgctcggcc gggttgaacg gctggccgat cggctcgatc
     1141 cgttccaatc ccgcggcgac cagttctttg cgcagcttgc gatcgaccag aaccagggcc
     1201 tcgtgcaacg cgtcggaccc ggtggcggaa agatcctgcg cggcgaggcg gtccaggtcg
     1261 tcgagcacgt caagcagctt gagcaccagg gccgcctgag cccggtcggt cagctccacc
     1321 cgttcccgag caactcgctt gcggaagttg tcgtactccg cggccagccg caggtggcga
     1381 tcctgcgcct cccccagctg atcctcgagc cgggccacgg cgttctcgct cggttccgcg
     1441 gggacgcccg aaaccgcccc ggacggcatg gcaggtgcgg gctcggaaac cggttcgtcc
     1501 tccgcaggag cgtcgtcgga agctttatgt ctctcagtca cttacatacg cctcgttcca
     1561 acttagaaca gtgaaagata accctatcat ccgccgatta cgcagtccgg attgcggtgt
     1621 tttgaggctc aggcatcggc ggaagcgcct caagaaaccg gatgttcgac caaaaggcgc
     1681 cagaggcgat gcagggcaaa ctgagccgcc cgctcccgga tctcccgccg gttgccgagg
     1741 aagacataac gggccgactc cagccgatcc cggacgaccc agccgaagca caccgtccca
     1801 accggcttcg cctcggttcc accggagggc ccggcgatgc cggtcaagcc gatggcaacc
     1861 tcgaccccga agcgggacgc ggcgcctcga gccatggcag cagccacttc ctggctcacc
     1921 gccccgtgcg cttccagcag cgccggcgcg accgagagca gggtcgcctt ggccgcgttg
     1981 tggtagcaga ccgcgctccc cgcgaagaca tcggagctgc cggagatcgc cgtgacgcgc
     2041 actcccagca acccgccggt gcaggactcc ccgaccgcga gccggagccc gcgggcccgc
     2101 atggcatcca gcagcacggt cgcgagatcg gtatcgcctt ccccatacac cagcgggccc
     2161 agcagttccc gcagccgcgc ggcgccggcg ttcagcagcc ggtcggcctg gtccgaatcc
     2221 acctgccagg cggtgagacg gaggtcgact ccgtggaccc ccgggagata ggccagggtc
     2281 agcggctgga gcccgtcttc cagatcccct atcctctggg ccagactcga ctcgggtatc
     2341 gaggtggtgc gcagcagccg ggagcgcacc acccggcccg ccgcggcagc gccccgggcc
     2401 ccgagccgcg gcaccacctc gtgctgcagc agcttgcgca tctcgttagg cacgcccggg
     2461 agcatgatga ccaggcccgg cgggccgtcg agccagagcg cgggcgcggt cccccagcgg
     2521 ttggtcagca cggtcgcacc ctcgggcacc tcggcctgga cccggttggc cggagagggg
     2581 tcccgcccca tccgtcggaa gcgatcgacc agggcctgcc agatggcctc gtcgaatcgg
     2641 agcggccagc cgtacaggtc ggcgaccacc tgcttgctca ggtcatcccg ggtggggccc
     2701 aacccgccgg tggtgatcac gatcccggtc cggccgagcg cctcacccac cgcggcgcga
     2761 atcgcgccgg cctcgtcggc caccgcggtt cgccgcacga tcgtggcgcc gatcgccgcc
     2821 agggcctgac ccagctcggc tccgttggtg tcgacggtga acccgagcag caattcggtt
     2881 ccgatggtga cgacttcgag atccacggat gtcagcggct ggtgctggcc gaagagttcg
     2941 agaagaggtc gcgatagcgg tggatgtaga cgatgaagga ccagatggtg aggaccaccg
     3001 ccaccgccag ggtcaccgcc acgaagcctc catggaagtc ggtccagaac cgggcgaagg
     3061 ggctgtccca tcccagcggc ttcatcgcgt tgcggaacgc gaaccaggcg atggtggcgc
     3121 cgatgaagat gttctggaac gccgccttga gcttcccggg accatgggcc gcgatcacca
     3181 cgccccgctt ctgggcccac cagcggaaca cggtcatggc gaactcccgc cccagcagca
     3241 gcaggcagac ccacaacgga atgctgcccc agaccgggat gccgtacaag tcctgccgct
     3301 cctgggagat ccagtagatc gggatcaggg tggccagcag cagcagcttg tcggccaccg
     3361 gatcgagcag cttgcccagg tcggtgatct ggttgcggct ccgcgccaga cggccgtcgt
     3421 agacgtcgga gatcgcggcc accaggaaga ccacgaagca gatgaacttg ggggtatagc
     3481 cttcgatgaa cggcaacaac gcgatcacgg gcgtaatgag gatccgcgcc agcgtgatga
     3541 tgttggggag ggtccacata agagctatcc gagtgctttc agcaccttct tgctgatggc
     3601 ccgcagggtg tcgaacaccc cgactccctg caccgccacc ccttcgaagt agggtacccg
     3661 ttccacccag ccgccgtcca cctggcggac gagaaggtcg ccggggcggt cggggtcagg
     3721 gaaggcgcgc tgccgggcgg gctcttcgac cggccatccc ggattgaggg cctcctgcag
     3781 ctccgggatc ggcgcggcgt tgggcagatc gcgtttgttg tactggacca cgaacggcat
     3841 cttggtcaga tcgtacccgt gctgcgccat gttgtcgtac aggttctgca tcgactccag
     3901 gttcgcctcc atccgttcca actggctgtc ggccacgaac accacgccat cgacgccctt
     3961 gaggatcagc ttacgggaag cgttgtagta cacctgcccc ggcacggtgt agaggtggaa
     4021 ccgggtcttg aagccccgga tggtgccgag atccacgggg aggaaatcga agaagagggt
     4081 ccgctcggtc tcggtggcga gcgagatcag cttgcccttg gcggtgggcg ccaccttctc
     4141 gtagacgtac tccaggttgg tggtcttccc gccgaggccc gggccgtagt acaccagctt
     4201 gcagttgatc tcgcgcgacg cgtagttgat cagcgacatg ctggtctcgg cctcacattg
     4261 ctccgaagag ccggtcgatc tcgtcctcgg cttcgcccac gaatccggct tcgacggtgg
     4321 tcgtctggcc gccgcgggag aacaattctt cgaacagggt ggagaggtcc accacggcac
     4381 gccggacccg cagcttcacc agcccgagcg tggtgcggtt gtcgaagagc accaccagga
     4441 tcacccggcg ggccacgtcg gccaggtaga gcgactcccg ctcgccctga tggaacaggg
     4501 agccgaactc ggcttccccc agcatccggg cc
//
LOCUS       DASWKS010000305         2524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1645507, whole genome shotgun sequence.
ACCESSION   DASWKS010000305 DASWKS010000000
VERSION     DASWKS010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1645507"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VGA78_08765"
     CDS             complement(<1..606)
                     /locus_tag="VGA78_08765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894005.1"
                     /translation="MKPSPRKGSSVPQPDKARTPLRRAREPGGRARPLLPSFSRWLSH
                     PVVGLGAILLFAGAGLYALATRAQVEIERGERQRAEMTLQGEMIRLSALQRQVAEQER
                     MLGGLREEVSHRMGDIGEVRDELTRRAAELDRLRALMTQREQDATGLRKALAQRDEML
                     DFLRSPHVKVVSLAGQERAKSAGALLLFDPARKKAFFYGFNM"
     gene            complement(710..>2524)
                     /locus_tag="VGA78_08770"
     CDS             complement(710..>2524)
                     /locus_tag="VGA78_08770"
                     /inference="COORDINATES: protein motif:HMM:NF014598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEX9894006.1"
                     /translation="GRFLAKRVLELDDRRVTPAHRLHDGANFIPTNRWVLFGHHFAAI
                     AGAGPLLGPVLAAQFGFLPGFLWLVVGAVLAGAVQDFVILVASMRRNGRSLPQIARDE
                     IGTVTGTATAVAVLFIVVVALAGLGLAVVNALSHNPWGTFTLALTIPIALLMGFYLQS
                     WRPGRVGEMSAMGVILLVAAVLAGHGVAHSSLARFFDLERDTLVWLLATYGFLASVLP
                     IWMLLVPRDYLSSFMKVSVVVLLGVGVVLMAPTIQMPRVTAFISGGGPVIPGPIFPFV
                     FITIACGAISGFHSLVASGTTPKMIDRESHAMIGYGAMLMESFVGVIALVAASILMPG
                     DYFAINTKLSADALGALGYPVEHIRELSRLVEQEVMGRPGGAVSLAVGMASIFSALPG
                     LSAIPGVMAYWYQFALLFEALFILTTIDAGTRVARYLVQEMGGILYAPLRTIAWAPGV
                     IGASLAVVGSWGYLLATGTVSTIWPMFGAANQLLGMLALCVGTTVLIKMGKAPYLWVT
                     AVPMVFVGVITLSGCFELFVFFSSKAVDAGGTDAIPFYLDAALVAVVASLAMVILGDS
                     VAKWYGYLVQKKPITTSEVAADVAGDQGGIKIPAGPCC"
BASE COUNT          500 a          893 c          785 g          346 t
ORIGIN      
        1 catgttgaaa ccgtagaaaa acgccttctt gcgcgccggg tcgaacagca acaacgcgcc
       61 ggctgacttg gcccgttcct gcccggccag cgacaccacc ttgacatggg gggaccgcag
      121 gaagtccagc atctcgtccc gttgggccag cgccttgcgc aggccggtcg cgtcctgctc
      181 gcgctgcgtc atgagggcgc gcaggcgatc caattcggcg gcacgccggg tcagttcgtc
      241 ccgaacctcg ccgatgtcgc ccattcgatg gctcacctcc tcccgcaagc cgcccagcat
      301 ccgttcctgt tccgccacct ggcgctggag cgcggagagg cgaatcatct ctccctgcaa
      361 ggtcatttcc gcgcgctggc gttcccctcg ctcgatctcg acctgcgcgc gggtcgccag
      421 cgcgtagagc ccggcccctg cgaacaacaa aatcgccccg agccccacca cgggatggga
      481 cagccagcgg gaaaacgagg gcaggagtgg ccgggcccgc ccgcccggct cccgcgcccg
      541 gcggagaggc gtccgcgcct tgtcgggttg cggaaccgaa gagccttttc tgggggaagg
      601 tttcataggc gccgtgcgtg accggatcct ttttgaaagg tatgatcgaa gggcgcatca
      661 taccactcta cgttccgctc aggcaaaacg gtcgtatcaa gggaaaattt cagcagcagg
      721 gcccggccgg gatcttgatc cccccctgat cgcccgcgac gtctgctgcg acctcgctgg
      781 tcgtgatcgg cttcttctgg accaggtacc cgtaccactt ggcgaccgag tcccccagga
      841 tcaccatcgc gagtgacgcc accactgcca ccaacgcggc gtccagataa aagggaatgg
      901 cgtccgttcc gcccgcgtcc acggccttac tggaaaagaa cacgaacagc tcgaagcagc
      961 cggacaacgt gatgaccccc acgaatacca tcgggaccgc cgtcacccag aggtaaggcg
     1021 ccttccccat tttgatgagg accgtggttc cgacgcacag ggccagcatg ccgagcaatt
     1081 ggttcgccgc cccgaacatg ggccagatgg tggagaccgt ccccgtggcg agcagatagc
     1141 cccagcttcc caccaccgcc aggctggccc cgatcacgcc aggcgcccag gcgatcgtcc
     1201 gaaggggcgc gtagaggatc ccccccatct cctggacgag gtagcgcgcc acgcgggtcc
     1261 cggcatcgat ggtcgtgagg atgaacaagg cctcgaagag cagggcgaac tgataccagt
     1321 aggccatcac gcccgggatg gccgaaaggc ccggcaaggc cgagaagatc gaggccatcc
     1381 ccaccgccag cgagacggcg cccccgggcc ggcccatgac ctcctgttcc accaggcggg
     1441 aaagctctcg gatgtgctcc accgggtagc cgagcgctcc cagcgcgtcg gccgacagct
     1501 tcgtgttgat ggcgaagtag tcgccgggca tcaggatcga agcggccacc agcgcgatga
     1561 cgcccacgaa gctctccatc agcatcgccc cgtacccgat catcgcgtgc gattcccgat
     1621 cgatcatctt gggcgtcgtg ccggaggcca ccagcgagtg gaagcccgag atcgccccgc
     1681 aggcgatcgt gatgaagacg aaggggaaga tcggtccggg gatgaccggc ccgccccccg
     1741 aaatgaaggc cgtgacccga ggcatctgga tggtcggggc catgagcact acgccgacgc
     1801 ccaacaggac caccacgctg accttcatga agctcgacag ataatcgcgc ggcaccagca
     1861 gcatccagat cggcaagacc gacgccagga atccgtaggt cgccagcagc cagaccagcg
     1921 tatcccgctc gagatcaaag aaccgcgcga gggacgaatg cgcgaccccg tggccggcca
     1981 ggaccgccgc caccagcaga atcaccccca tcgccgacat ctcgcccacc cggcccggac
     2041 gccagctttg gagatagaac cccatcagta aggcgatcgg gatcgtcagc gcgagcgtga
     2101 aggtgcccca gggattgtga gagagagcgt tcacgacggc caggccgagt ccggccaggg
     2161 ccaccaccac gatgaagagg accgccaccg ccgtcgccgt gcccgttacc gtcccgatct
     2221 catcgcgcgc gatttgcggc agcgaccggc cgttgcgccg catcgaggcc acgaggatca
     2281 cgaagtcctg caccgcgccg gccagcaccg cgccgaccac cagccagaga aagcccggga
     2341 gaaatccgaa ctgcgcggcg agcaccggcc ccaggagggg ccccgcgccg gcgatcgccg
     2401 caaagtgatg cccgaacagc acccagcggt tggtggggat gaagttggca ccgtcatgga
     2461 gccgatgcgc cggcgtcacc cggcggtcgt ccaactccag cacgcgcttg gccagaaacc
     2521 gccc
//
LOCUS       DASWKS010000306         2807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1257613, whole genome shotgun sequence.
ACCESSION   DASWKS010000306 DASWKS010000000
VERSION     DASWKS010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257613"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2807
                     /locus_tag="VGA78_08775"
     CDS             <1..>2807
                     /locus_tag="VGA78_08775"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HEX9894007.1"
                     /translation="PILTYLPDPIEVPVDIRTIEVTFDRPMDQDRVEAAFSLSPAVPG
                     HFSWQANTMTYHLEELLDYNADYTATIGQEAQDAEGTPVFQVPFSWSFSLSYFDYYGT
                     FGNWGAKVQVVDAEGSRSLEFGLPNRGPTLVTFELHKLSSQQFTALARLNTSFSDPRL
                     ADVPGEPELTYSWEVTAGVRTSESGMEQLIIPEEVPPGLYLLRLRSDGRVEDEMAIVL
                     SRYTLAVKRAGRQLLVWASEINGEIVPDMEIRVFATDGRLVREGLTDDNGLFETTLAP
                     GDVPLIIHGRTPEGGSTVAGVDNAWRVYSSDDSPWGFTRPGTIKEHLAYIYTDRPIYR
                     PGQTVFFKAIVREDQDALYRLLAEGSEVPLRILDARGNLLDTQVLVLNEFGTAHGQFS
                     VGAGASLGEYTLEADLNGEAYQGLFQVQDYRKPDIALEITTEAGGYVAGDLIPVEVQA
                     QYFLGEPVPDAKLEVRLYELAEFYGYWWEPFSEDEQVQYAWYPTYDDPVLGRTDQAGE
                     FSVSLPARLGAETGYWTGWWTGLRETAWGVEVTLDDGSHQTVSAFAVVKVFNTAEQMS
                     LDVGGFFREPGQAFEVEVAVEDLLGQPVAGRNLLLEVRSWDRASYEYDRIVRAATLAT
                     GEDGTATSSLESLTPGYYQLRLTNTEARGEDSQISRWIYVYQPGGFWDRLETNRAALT
                     ISSDQAGYAPYDTATLYIESAMGGPALLTVERSSIRRERVIELTPPITTVELPILAGD
                     RPNIFVSVASWQAQSTQLTGEFQYTNLPASRLLSASLELPVEAVGRELQLEIVTDRPA
                     YGPGDEAEVRLRVTDADGKPAAAEVSLALVDEAIFALSEDLTEPMMDAFYGRRANGIR
                     TYSSLAPYREIFLDGRGGGGDGGPGSPGNPRSDFEDLAAWFPELRTDANGEVVVRITL
                     PHNLTSWRFVARAVTRDTRVG"
BASE COUNT          484 a          940 c          917 g          466 t
ORIGIN      
        1 gccgatcctg acctacctgc ccgatccaat cgaggttccg gtcgatatcc gcaccatcga
       61 ggtgaccttc gaccggccga tggaccagga ccgggtcgaa gccgccttca gcctctcccc
      121 cgccgtcccg gggcacttca gctggcaggc aaacacgatg acctaccacc tcgaggagct
      181 tttggactac aacgcggact acaccgccac gatagggcag gaagcgcagg acgcggaagg
      241 cacgccggtc ttccaggtgc ctttctcctg gagtttctcg ctgtcctact tcgattacta
      301 cggcaccttc ggcaattggg gcgccaaggt ccaggtcgtg gacgcggagg gcagtcgatc
      361 gctcgagttc ggtctgccca accgcggccc cacgctggtg actttcgagc tgcacaaact
      421 ctccagccag cagttcaccg cgttggcacg cctcaatacc agtttcagcg acccgcgcct
      481 ggccgatgtt ccaggcgaac ccgagctgac ttacagctgg gaagtgactg ccggtgtaag
      541 gaccagtgaa agcggcatgg agcagttgat catcccggag gaagtcccac cgggcttgta
      601 tctgctgcgc ctgcggagcg atgggcgggt ggaagacgaa atggccatcg tcctctcccg
      661 ctacaccctg gcggtgaagc gcgccggccg ccagctgctg gtctgggctt cggagatcaa
      721 tggtgagatc gtccccgaca tggagatccg ggttttcgcc accgacggcc ggctggtccg
      781 ggaagggctc accgacgata acggtctctt cgaaaccacc ctggcgccgg gggacgtgcc
      841 gctgatcatc cacgggcgta cgccggaggg cgggagcacc gttgccggag tagacaatgc
      901 gtggcgggtg tattcctcgg acgacagccc gtggggattc acccggccag ggaccatcaa
      961 ggagcatctg gcctacatct atactgaccg gcccatctac cggccggggc agacggtgtt
     1021 cttcaaggct atcgtgcggg aggaccagga cgccctgtac cggctgctcg ccgaggggtc
     1081 cgaggtcccc ctccggattc tcgacgcccg cggcaacctg ctcgacactc aggtcctcgt
     1141 gctcaacgag ttcggcaccg cccacggcca attcagcgtg ggcgccggcg ccagcctggg
     1201 cgagtacacc ctggaggccg acctcaacgg cgaggcctac cagggcctct tccaggtaca
     1261 ggattaccgt aagcccgata tcgcgctgga gatcaccacg gaggccggtg gctacgtggc
     1321 cggcgatctc atcccggtcg aggtccaggc ccagtacttc ctcggtgagc cggtgcccga
     1381 cgctaagctc gaggtccggc tgtacgagct ggccgagttc tatggctatt ggtgggagcc
     1441 gttctccgag gacgagcagg tccagtacgc ctggtatccg acgtacgacg accccgtcct
     1501 cgggcggacc gatcaagccg gggagttcag cgtcagcctc cccgccaggc tgggcgccga
     1561 gaccgggtac tggaccggct ggtggaccgg cctgcgcgag accgcctggg gcgtggaagt
     1621 caccctcgac gacggcagcc accagacggt ctcggccttc gcagtcgtga aggtcttcaa
     1681 caccgccgag cagatgagtc tcgacgtcgg gggtttcttc agagagccgg ggcaggcgtt
     1741 cgaagtcgag gtagccgtgg aagacctgct gggtcaacca gtggcggggc gcaatctgct
     1801 gctggaggtg cgttcctggg accgggcgag ctatgagtac gaccggatcg tcagggccgc
     1861 gacgctggcc accggcgaag acggcacggc gacctcctcc ctggaatcct tgacgcccgg
     1921 ctattaccag cttcgcttga cgaacaccga ggcccgcggg gaggacagtc agatctcccg
     1981 ctggatctac gtctaccaac cgggaggctt ctgggaccgc ctggaaacca atcgggccgc
     2041 cctgacgatc agttccgatc aggccggcta cgccccctac gacaccgcca cgctgtacat
     2101 cgagtccgcg atgggtggcc cggcgctgct caccgtcgag cgcagcagca tccggcggga
     2161 gcgggtcatc gagctcaccc cgccgatcac cacggtcgaa ctgccgatcc tggccggcga
     2221 ccggcccaac attttcgtga gtgtggcgtc ctggcaggca caatccaccc agctcaccgg
     2281 cgagtttcaa tacaccaacc ttcccgccag ccggctgctc tccgccagtc tggagctccc
     2341 ggtcgaggcg gtcggtcgcg agctacagtt ggagatcgtg actgaccggc ccgcctacgg
     2401 tcccggcgac gaggccgaag ttcgtttgcg ggtgaccgat gccgacggaa agccggcggc
     2461 ggccgaggtg tccctggccc tggtggacga ggccatcttc gccctgagcg aggacctgac
     2521 cgagccgatg atggacgcct tctacggccg ccgagccaat ggcattcgca cctactcctc
     2581 gctggctcca tatcgagaga tcttcctgga cggccgcggg ggcggcggcg acggcggacc
     2641 gggctcgccg ggcaacccgc gttcggattt cgaagacctg gccgcctggt tccccgagct
     2701 gcggaccgat gcgaacgggg aagtagtcgt ccggatcacc ctgccgcata acctgacctc
     2761 ctggcgcttc gtggcgcggg ccgtcacacg cgacacccgg gtgggtg
//
LOCUS       DASWKS010000307         3499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_890542, whole genome shotgun sequence.
ACCESSION   DASWKS010000307 DASWKS010000000
VERSION     DASWKS010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890542"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..1396
                     /locus_tag="VGA78_08780"
     CDS             266..1396
                     /locus_tag="VGA78_08780"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HEX9894008.1"
                     /translation="MLSPEDLRDLGRAIGDSRIVLLGENGHGVAQFTTLKSGLVRWLH
                     QEMGFEVLAVESGYAECEAVNAQLPGLPLSDAIRRCMAYAFEHAELQPLFRYLGQQRG
                     SGRPVWLSGLDLQTQGADSRSRPGHLRDSLRRIAPAYAVLVGALDSTLLARTAAGPDS
                     LRQWVRAEGDAARALYDSAAAQATGTVRWMLLGAGVLLDRLVSRETAAASGRPAPVRF
                     YQRRDEWMARTVSWLADSVGGPRKVVVWLHNDHARSGSWMTPAGPARATGSLLRETYP
                     GRVYSIGFFMGRGAVADNSRRVLPMLAPPEEGIERALASNGERGAYLLLSSRAVPAAQ
                     GWAKVMRHYLRNGLVLDSLIPAREFDALMYVDSVTPAGYRLP"
     gene            1426..1875
                     /locus_tag="VGA78_08785"
     CDS             1426..1875
                     /locus_tag="VGA78_08785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894009.1"
                     /translation="MTWNAGCSASSDLSPLPSPPQGFAHAYAAPSCAPWDGYAVSIVL
                     RGDPLDPADSLIEGGDQPQLRVAIYPRDATRLGPRTYRWPRQPEEASGARCEGGRCEP
                     ARTGWIRIRSIAADSGLRGEIELQLSGGATFRGGFTAVWRSRKNFCI"
     gene            complement(1891..3093)
                     /gene="alr"
                     /locus_tag="VGA78_08790"
     CDS             complement(1891..3093)
                     /gene="alr"
                     /locus_tag="VGA78_08790"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9894010.1"
                     /translation="MALSRRTFFTASLGALGAAHYARTAAALVNQQAASAGFDPWLEI
                     DAEALRWNASAVARLAGGRPILAVLKNNAYGLGLAEVGPVLEAHPAVYGMAVVRAAEA
                     MALRAAGVRKPVLLMGRCSEEEALELARAEVRLAAFGDDAGSRLSRVAGRLGRPLGVH
                     LYLDTGMGRMGTSHRVASEWIAALAAGRDLRIEGVFTELTEDPDFDREQVTRLERLAA
                     GAKARGVTLGPLHAASSAAVTHQPETHLDMVRPGLALYGGYVSPDAPLRAELRPAYRL
                     RAPVIRVDQLQPGDGVSYHRRWKATRPTWIAVLPVGHVDGYPSGAVKGAQVLIGRRLY
                     GVIGSVSASHTIIEVGDDPTVQVGDVATLVGGEDPAIHPNEVARRAGYSEYDMFMHLN
                     PLLRRQVV"
     gene            3150..>3499
                     /locus_tag="VGA78_08795"
     CDS             3150..>3499
                     /locus_tag="VGA78_08795"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9894011.1"
                     /translation="MAPTDRRSFLLQTAGALSGISLLPDPLPTEPVRLVAPQRVGLIG
                     AGRQGRAIIGELQQLPDVTVGVVCDSNPSRLRTALERAPGAEGTPDYHAVLGKSDVDA
                     VIVATPTHLHRQIV"
BASE COUNT          544 a         1229 c         1169 g          557 t
ORIGIN      
        1 ccaacggtga gaaggcccgg tagcttgacg ctgacggccg ggaagtgagc attcacacct
       61 atgacacgcg ctggcgcccc actcctggtt ggggacaccc tggacgatga cagccgctcc
      121 gccaccgccc gctcgcctcg ctgcttcagc cggactggtt gccgccctga ttagtggctg
      181 cgcatcggca ccgacgggcc aagcccccgg ccctgtgggc gagccccaga tccgtacagc
      241 gctccatccg atcacaccgg acacggtgct ttctccggaa gatctccggg acctcggccg
      301 ggcaatcggc gacagccgaa tcgtcctcct gggcgagaac ggtcacggcg tcgcccagtt
      361 caccaccctc aaaagcggcc tggtgcgctg gttgcaccaa gagatggggt tcgaggttct
      421 cgcggtcgaa agcggatacg ccgagtgcga ggccgtgaac gcgcagctgc cgggcctccc
      481 cttgtccgat gcgatccggc gctgcatggc ctacgccttc gagcatgctg agctccagcc
      541 actgttccgg tatctcgggc aacagcgcgg ctcgggccgg ccggtctggt tgagcgggct
      601 tgatctccag acccagggcg ccgactcccg gagccgtccc ggacacctgc gggacagcct
      661 tcgaaggatt gccccagctt acgccgttct ggtcggcgca ctcgattcga cgcttctcgc
      721 ccgcaccgcg gcggggccag acagcctgcg gcagtgggtg cgagcggaag gcgatgcagc
      781 ccgcgccctc tatgattcgg cggcggcgca agcgaccggg accgtgcgct ggatgcttct
      841 tggcgcgggc gtgctgctgg atcgtctggt cagccgggag acggcagcgg cgagcggccg
      901 gcccgctccg gtgcgtttct accagcgtcg tgacgagtgg atggcccgta ctgtttcctg
      961 gctggcggac tcggtcggcg gccccaggaa ggtggtcgta tggctgcaca acgatcacgc
     1021 ccgatccgga tcctggatga ctccggcagg tccggcccgt gcgaccggta gcctgttgcg
     1081 cgagacgtat ccaggccgag tgtactccat cggctttttc atgggccggg gggcggtggc
     1141 ggacaactcc cgccgggtac tgccgatgct tgcgccacca gaggagggca tcgaaagggc
     1201 cctggcaagt aatggtgagc gcggggcgta tcttctgctc tcatcgcgcg cagtgcccgc
     1261 cgcgcagggt tgggccaagg tcatgcgaca ctacctgcgg aacggactgg tgttggatag
     1321 cctgattccg gcccgcgaat tcgatgccct gatgtatgtc gacagcgtga cgcccgctgg
     1381 gtatcgcctg ccgtgatcga ctcggggcga gctctgatcc tggtcatgac atggaacgcc
     1441 ggttgtagcg caagctccga tctgtccccc cttccctcgc cgccgcaggg attcgcccac
     1501 gcctatgccg ccccgagctg cgcgccctgg gatggttacg ccgtgagtat cgtgctccgg
     1561 ggcgacccgc tggacccggc cgacagcctg atcgagggag gggaccagcc gcaactgcgg
     1621 gtggcgatct atccccgcga cgccacccga ctcgggccca ggacctaccg gtggccgcgt
     1681 cagcccgagg aggcgtccgg ggcacgctgt gagggcggtc ggtgtgagcc ggcccggacc
     1741 ggctggatcc ggatccgatc gatcgcagcc gacagcgggc tccgaggtga gatcgagctc
     1801 caactctccg gcggcgccac ttttcgaggc gggttcacgg cggtgtggcg gtcacgaaag
     1861 aacttctgca tctgagggcg gtcaccggcg ctacactacc tgcctccgca gcaacggatt
     1921 caggtgcatg aacatgtcgt actcggagta gccggcccgc cgcgccacct cgttgggatg
     1981 gatggccgga tcctcaccac ccaccagggt cgcgacatcg cccacctgga ccgtgggatc
     2041 atcaccgact tcgatgatgg tgtgactcgc gctcacgctg ccgatgacgc catacagccg
     2101 ccggccgatc agtacttgag cgcccttcac cgcaccgctg ggatagccgt cgacgtgtcc
     2161 gacgggaagc accgcaatcc aggtgggacg cgtggctttc cagcgccggt gatagctcac
     2221 cccatctccc ggctgcagct gatcgacccg aatgaccgga gcccgtagac gataggccgg
     2281 ccgcagctcg gcccgcaaag gcgcgtccgg gctgacgtag ccgccgtaca gagccagtcc
     2341 gggtcggacc atgtcgagat gggtctcggg ctgatgggtc accgccgcgg aggacgcggc
     2401 atgaagcggg cccagcgtca ctccgcgggc cttcgctccc gccgccagcc gttccagccg
     2461 ggtgacctgc tcccgatcga agtcggggtc ttccgtcaac tcggtgaaaa caccttcgat
     2521 gcggaggtcc cgccccgccg ccagcgcagc aatccactcg gacgcgaccc ggtgcgatgt
     2581 gcccatccgg cccattccgg tgtcgaggta gaggtggacg cctaacggcc gccccagacg
     2641 gccggccacc cggctgagtc gagacccggc atcgtcgcca aaggccgcca ggcggacctc
     2701 ggcccgggcc agctccaggg cttcttcctc gctgcagcgc cccatcagca gcaccggttt
     2761 tcgcaccccg gctgctcgca gcgccatggc ctccgccgcc cgcaccaccg ccatcccgta
     2821 cacggcggga tgggcctcga gtacggggcc gacctcggcc aggcccaggc cgtacgcatt
     2881 gttcttgagc accgcgagga tggggcgacc gccggccagc cgagccaccg cactcgcatt
     2941 ccagcgtaat gcctcggcgt cgatctcgag ccagggatcg aaaccggcgg acgcagcctg
     3001 ctggttgacg agggcggctg cggtccgggc gtaatgcgcc gcacccagcg cgccgaggga
     3061 ggccgtgaag aacgttctgc ggctgagagc catctcgtaa agtaccccgc ggtcttgccg
     3121 ccgcgagccc tacgcgatca ccttccgata tggcccccac cgaccgccga tcctttctgc
     3181 tccagacggc aggcgccctc agcgggatct ccctgctgcc cgatccgctg ccgactgaac
     3241 cggtccggct ggtggcgcct cagcgcgtcg ggctgattgg ggccggccga cagggccggg
     3301 cgatcatcgg agagctgcag cagctgccgg atgtgaccgt gggggtggta tgcgatagca
     3361 acccctcccg gctgcgcacc gccctggaac gggcccccgg cgcggaaggc actcctgact
     3421 accatgccgt cctgggaaag tccgacgtgg atgcggtgat cgtcgccacc cccacccatc
     3481 tgcaccggca gatcgtgca
//
LOCUS       DASWKS010000308         4646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2020134, whole genome shotgun sequence.
ACCESSION   DASWKS010000308 DASWKS010000000
VERSION     DASWKS010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4646
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2020134"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..620
                     /locus_tag="VGA78_08800"
     CDS             <1..620
                     /locus_tag="VGA78_08800"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9894012.1"
                     /translation="YVSDEEERWRRFKQPIHATLVQPSLRGLRAALLVLVPLAVGFAA
                     FQQARPRVAAPIQLRSIHPAPPSQISFKGRAISLTGLENPLRSRGDLAEHYRTGRRVY
                     YQNCLPCHGDLLDGKGHFGTGFSPTPLAFDDPGNIAQLTESFVFWRIAKGGPGLPREG
                     TPWNSAMPVWEDFLTEDEIWAVIIFLYQQSGFSPRRWEVGGGEHD"
     gene            640..2253
                     /locus_tag="VGA78_08805"
     CDS             640..2253
                     /locus_tag="VGA78_08805"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9894013.1"
                     /translation="MPSAQCRGTAGGRPATVLSPLPAPLLWALGIGHSAFTLALLLCP
                     SALQAQAPAGKETYEKWCAGCHGETGAGDGDAAAYMLPRPRDFTKGVYQIRSTASGSI
                     PTDADIRRIIDEGMPGTAMPEWKSKLADRERDDLVTYLKTFSRFFQTAKVQEVSLGRA
                     PGSSAETVADGRETFRKLECFKCHGQQGRGDGTSAPTLTDDLDFPIRAADLTESWQFN
                     GGSSVEEIYARLRTGLDGTPMPSFSDVIESNIITDEQLWHVAQYVRSLSPERAPVVRE
                     VIRAHRAETLPTDPGDSAWAALEPFYIPLVGQIIRSPRWFTPNVDGVWVRAMHDGQRL
                     AIRLSWSDPSKSPDGAWQEWLDRIGRTVARDDTTALVNGPDWFALQFPERVSEDAERP
                     YFLGGTTRRPVHLWRWSSEPDRVQEGSGTGLGQFAPSAGPAQVTHAARFDQGEWQLQL
                     TRALVPADTGAGPAFSTGTAIPIAFYAADGSNGEDPVRGAVSAWYAIYLDVPTPGRVY
                     VQPVIAVLLTAGLGLFVVIRAQRRERNQA"
     gene            2273..3040
                     /locus_tag="VGA78_08810"
     CDS             2273..3040
                     /locus_tag="VGA78_08810"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9894014.1"
                     /translation="MKSLTVMLCGGLLLAGCGGEKGGASNEGGAPPAPPSAAPAGSAT
                     VTGTVKFTGTTPVNPLIDMSEEAACKAKHTGGITDPQVVVTNGNLANVFVYVKSGLPA
                     GATFTAPAEAVVIDQNGCLYHPRVFGVMAGQPIEIRNSDPVLHNIKAVPSANRGFNIS
                     QPTEGMKTTRTFDTPEVMVPLECNVHGWMNAYVGVMSHPFYAVSGEDGSFRITGLPAG
                     TYEIEAWHEKLGTQTMSVTVPDGGSATADFSFAPKTA"
     gene            3050..3724
                     /gene="coxB"
                     /locus_tag="VGA78_08815"
     CDS             3050..3724
                     /gene="coxB"
                     /locus_tag="VGA78_08815"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX9894015.1"
                     /translation="MDWMLPPGASTFAGDIDRIYYGILIVTAIAFVVVEVGLIWFLFK
                     YRSRPGRVAHYTHGSLKAEVIWTAIPAVTVVVIGLLSGRVWTHIKGHNSVPEGALPIG
                     IHAKQFEWNVTYPGPDGALETGDDFTIRNQIHVPVGRPVVATLNSEDVIHSFNVHAFR
                     VKQDAVPGMQIRVWFQATQPGEYELACAELCGLGHYKMRAVVTVHTEESYQQWLGERS
                     RTVALR"
     gene            3733..>4646
                     /locus_tag="VGA78_08820"
     CDS             3733..>4646
                     /locus_tag="VGA78_08820"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX9894016.1"
                     /translation="MTTIAAQPGEAHPAHADDRTFLRKYIFSTDHKIIGIQFLLMSLL
                     FLLLGGILAMVIRWQMGYPNQPMPGGGVLPETMAPGGVVLPEFYTSLVTMHGTFMVFF
                     AIMPLLVGVFGNYLIPLKIGAPDMAFPRLNMASFWIAVPAGILMIAGFFVEGGHASAG
                     WTSYAPLSANPEYTGVSLGQQIWCVSLIVLGLSSILGAVNYISTVINLRAPGMTWFRL
                     PLSIWALFITAILVLLAMPILSGALIMLLFDQTLGTHFFLPAEGGQPLLWQHLFWFFG
                     HPEVYILILPAMGMASDIIANGSRKPIFG"
BASE COUNT          758 a         1559 c         1538 g          791 t
ORIGIN      
        1 tttatgtgag cgacgaagaa gagcgctggc gccggttcaa gcagccgatc cacgcgacgc
       61 tggtccagcc cagcctgcgg gggctgcgcg ccgcgttgct ggtgctggta ccgctggcgg
      121 tggggttcgc cgcgttccag caggcccggc ccagggtggc cgcgccgatc cagctgcgca
      181 gcattcaccc cgcgccgccg tcccagatca gcttcaaggg ccgggcgatc tcgctcaccg
      241 gcctcgagaa tccgctccgc tcccgcggtg atctcgccga acactaccgc accggtcggc
      301 gggtgtacta ccagaattgc ctgccctgcc atggggacct gctggacggc aaggggcact
      361 tcggcaccgg cttcagcccc acgccgctgg cgttcgacga tccaggcaac atcgcccagc
      421 tgaccgagag cttcgtgttc tggcgtatcg ccaagggcgg cccggggctc ccgcgcgaag
      481 gcacgccctg gaattcggcc atgccggtat gggaggactt tctgaccgag gatgagatct
      541 gggcggtcat catcttcctc tatcaacaat cgggcttttc tcctcggagg tgggaggtgg
      601 gaggggggga gcatgactag agggaatgca gagtgcccaa tgcccagtgc ccaatgcaga
      661 ggtacggctg gggggagacc ggcaaccgtc ttatcccccc tgcctgcccc tctgctatgg
      721 gcactgggca ttgggcactc tgcattcact ctcgctctcc tcctttgtcc ctccgccctc
      781 caggctcagg ctcccgccgg gaaggagacc tacgagaaat ggtgtgccgg ctgccacggc
      841 gaaaccgggg ccggcgatgg cgatgcggcg gcctacatgc tcccccggcc ccgcgatttc
      901 accaagggcg tctatcagat ccggagcacc gccagtggtt ctatcccgac cgacgccgat
      961 atcaggcgca ttatcgacga ggggatgccc ggcaccgcca tgccggaatg gaagagcaaa
     1021 ttggccgacc gggagcggga cgatctggtg acgtatctca agaccttctc ccgcttcttc
     1081 cagaccgcca aggtgcagga ggtcagcctg ggacgggcgc ccgggtcgag cgccgagacc
     1141 gtggccgacg ggcgtgagac ctttcgcaag ctggagtgct tcaaatgcca cggccagcag
     1201 ggccggggcg acggcacctc agcccccacc ctgaccgacg atctcgactt cccgattcgg
     1261 gcggccgatc tcaccgagag ctggcagttc aacgggggca gttcggtgga ggagatctac
     1321 gcccggctcc ggaccgggct cgacggcacg cccatgccgt cgttcagcga tgtcatcgag
     1381 tcgaacatca tcaccgacga gcagctgtgg cacgtggccc agtacgtccg gagcctgtcg
     1441 cccgagcggg ctccggtggt gcgcgaggtg atccgggctc atcgggccga gaccctgccg
     1501 accgatccgg gcgatagcgc ctgggccgcg ctggagccgt tctacatccc gctggtgggc
     1561 cagatcatcc gatcgccgcg ctggttcacg cccaacgtgg acggagtctg ggttcgtgcc
     1621 atgcacgacg gccagcgcct ggccatccgg ttatcatgga gcgatccgtc gaagagcccg
     1681 gacggcgcct ggcaggagtg gctcgaccgg atcggtcgca ccgtggcccg ggacgacacc
     1741 accgccctgg tcaacggtcc ggactggttc gccctgcagt tcccggagcg ggtgtcggag
     1801 gacgcggaac ggccctattt cctgggcggt accacccggc ggccggtcca tctctggcgc
     1861 tggagcagcg aaccggatag ggtgcaggaa gggtcgggaa ccgggttggg gcagttcgcc
     1921 cccagcgccg gcccggcgca ggtgactcat gcggcgcgtt tcgaccaggg cgaatggcaa
     1981 ttacagctca cccgggctct ggtgccggcc gataccggcg cgggtcccgc gttctccacc
     2041 ggaacggcca ttcccatcgc gttttacgcg gccgacggct ccaacggcga ggatccggtc
     2101 cgcggcgccg tcagcgcatg gtacgcgatc tatctcgatg tccccacacc cggtcgggtg
     2161 tatgtccagc cggtcatcgc ggtgctgctc accgcgggac tcggtctctt cgttgtcatc
     2221 agggctcagc ggcgggaacg aaaccaggcc taggccgaaa gccggaggaa tcatgaagtc
     2281 attgacagtg atgctatgcg gcggactgct cctcgccgga tgtggtgggg agaagggcgg
     2341 ggcctcgaac gaagggggcg caccgccggc tccgccgtcg gctgcgccgg ccgggtcggc
     2401 caccgtcacc gggacggtga aattcaccgg caccacgccg gtcaatcccc tgatcgacat
     2461 gagcgaagag gccgcctgca aggccaagca caccggcggg ataaccgacc cccaggtggt
     2521 ggtgaccaac ggcaacctgg ccaacgtctt cgtgtacgtg aagagcggcc tgcccgccgg
     2581 cgctaccttc accgcgccgg ccgaggcggt ggtgatcgac cagaacgggt gcctgtacca
     2641 cccgcgggtg ttcggggtga tggcgggcca gccgatcgag atccgcaaca gcgacccggt
     2701 gctgcacaac atcaaggcgg tgccgtccgc caaccgcggc ttcaacatca gccagcccac
     2761 cgagggcatg aagaccaccc ggaccttcga cacgcccgaa gtgatggtgc cgctcgagtg
     2821 caacgtgcat ggctggatga acgcgtacgt gggggtgatg agccatccgt tctacgccgt
     2881 gtcgggcgag gacgggagct tccgcatcac cggcctgccc gccgggacct acgagatcga
     2941 ggcctggcac gagaagctgg ggacccagac catgtcggtc accgtgcccg acgggggttc
     3001 cgccaccgcg gacttctcgt tcgctcccaa gaccgcctga ggagggacga tggattggat
     3061 gctgcctccc ggcgcatcga ccttcgccgg tgacatcgat cggatctact acgggatcct
     3121 gatcgtcacc gcgatcgcct tcgtggtcgt tgaggtcggg ttgatctggt tcctgttcaa
     3181 gtaccggagc cgtccggggc gggtcgccca ctacacccac ggcagcctca aggccgaggt
     3241 gatctggacc gcgatccccg ccgtgacggt cgtggtgatc gggctgctga gtggccgggt
     3301 gtggacccac atcaagggcc acaacagcgt gccggagggc gcccttccga tcgggattca
     3361 cgccaagcag ttcgaatgga acgtgaccta ccccggcccg gatggcgcgc tcgagaccgg
     3421 cgatgatttc acgattcgga accagatcca cgtgccggtg gggcggccag tcgtggcgac
     3481 actcaattcg gaggacgtca ttcattcctt caacgtgcac gcgttccgcg tcaaacagga
     3541 cgcggtgccc ggcatgcaga tccgggtctg gttccaggcc acccagccgg gcgagtacga
     3601 gttggcctgc gccgagctgt gcggcctggg ccattacaag atgcgggcgg tggtcaccgt
     3661 ccacaccgag gagtcgtatc agcagtggct cggtgaacgc tcccgaaccg tagccctccg
     3721 gtaggacgac ctatgacgac gatcgcggcc cagcccggcg aagcccaccc cgcccatgcg
     3781 gatgaccgga ccttcctccg caaatacatc ttctccaccg accacaagat catcggcatt
     3841 cagttcctgc tgatgagcct gctgttcctg ctgttgggcg ggatcctggc gatggtgatc
     3901 cggtggcaga tggggtatcc caaccagccc atgccgggcg gcggggtgct cccggagacg
     3961 atggccccgg gcggggtcgt cttgccggag ttctacacct ccctggtcac catgcacggc
     4021 accttcatgg tgttcttcgc catcatgccg ctcctggtgg gcgtgttcgg gaactacctg
     4081 atcccgctca agatcggcgc gccggatatg gcgttccccc ggctcaacat ggcctcgttc
     4141 tggatcgcgg tgccggccgg catcctgatg atcgcggggt ttttcgtgga gggcggccac
     4201 gcctccgccg gctggaccag ctacgccccg ctcagcgcca acccggaata caccggcgtg
     4261 agcctgggcc agcagatctg gtgcgtcagc ctgatcgtgc tgggcctgtc ctcgatcctg
     4321 ggggcggtga actacatctc caccgtgatc aacctgcggg cgccgggcat gacctggttc
     4381 cgcctgccgc tcagcatctg ggccctgttc attacggcga tcctggtgct gctggccatg
     4441 ccgatcctgt cgggcgccct gatcatgctg ctgttcgacc agacgctggg aacccatttc
     4501 ttcctgccgg ccgaaggcgg gcagccgctg ctctggcagc acctgttctg gttcttcggc
     4561 caccccgagg tctacatcct gatcctcccc gccatgggga tggcctcgga catcatcgcc
     4621 aacggctccc gcaagccgat cttcgg
//
LOCUS       DASWKS010000309        17485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3466894, whole genome shotgun sequence.
ACCESSION   DASWKS010000309 DASWKS010000000
VERSION     DASWKS010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3466894"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..2126)
                     /locus_tag="VGA78_08825"
     CDS             complement(147..2126)
                     /locus_tag="VGA78_08825"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9894017.1"
                     /translation="MTCRGHLLGAAAVAVLLASCRLGDRLGPGDVAELDIIPATAWLE
                     PGATLTPELSASDPDGAPVPNPLVEWSSSSSAVARVDHAGRITAVAPGTATLAATSGS
                     VSASLRVTVVPAALPLRWSIASEGETDASLLGLWSDASGEAFVVGQAGTVFHTSGGGW
                     ERMTVPTGADLVGVWGSRPTDVYAVGDSGVIIHYDGVGWSRMASANTRLLLEVWGLDA
                     DHVYAVGVGTVLRREGSVWVPLPLSGMPELWAIWGSDPGNLFASGQNGALLRWNGVGW
                     QSMDSPTPLVLFGLYGTSTSNVWSIGIRGTILRFDGLTWSTVTGPTGADLFGIWGRSG
                     SEIYAVGNDGVVVAWNGGSWTLVPQSISAENLRAVSIAGNVLYAAGWNGTVLRRQGGS
                     WSAAMSSPGLFAAARSGTTAYAVGTSGTVLRESGGAWQRENTGTRQDLYSVVPTGTGE
                     LLAVGDTGTILRRTGETWSHEPNPVRGLLRSAWAGDGVELIVGESGTILHRSPAGQWV
                     ADPSPTAEFLRHVWGLDRQRIWAVGDSGTVLRWNGQGWASMPTPTSVVLRGVWGSAPD
                     DVHAVGAEGVILRYDGVRWYRQASPVDADLRAVWGTGPTDVYAVGEEGVLLRWDGVAW
                     VRIDSPVEDYLLGLSGDGTDALAVGMRRVVLRGLR"
     gene            complement(2123..2986)
                     /locus_tag="VGA78_08830"
     CDS             complement(2123..2986)
                     /locus_tag="VGA78_08830"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9894018.1"
                     /translation="MSSSVLISGCSSGIGKACALHFDRAGWLVFAGVRREEDARRLEV
                     EGSPRLHPLHLDITDPESIAAAAAKLSGQLGAAGLQGLVNNAGIARGGPLEYVPLDEF
                     RRQFDVNVFGTLALTQAFLPLLHAGHGRIVNIGSIAGRVTTPLLGPYCASKHALEAMS
                     DALRMELLPLGLYLSLVEPGVVDTPIWEKATRGGPSVIDRLPPVGQARYGGMGAALAQ
                     MLARAPRRAVPVEAVVRVVDHALTAARPRPRYLVGRDARVRLLLQSLLPRRWMDGLIL
                     RFFRRLAPRAA"
     gene            complement(2996..4924)
                     /locus_tag="VGA78_08835"
     CDS             complement(2996..4924)
                     /locus_tag="VGA78_08835"
                     /inference="COORDINATES: protein motif:HMM:NF021945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M66 family metalloprotease"
                     /protein_id="HEX9894019.1"
                     /translation="MTRLRQRLFRAQPGQCGVLLCLLALGCGGDGGVAPQLKGSLVVA
                     IDGLNLETPAAVQVSGPGGYTRSLSHSATLTGLETGNYIITAAPVSRDGTRFLPTPDG
                     QTGVVSAGGTATAGVSYSAASAATAGGFNLRIDGLYLTQAVQRYDGSVPLVAGRSAYL
                     RVFGVASNRAGVRPTVRVRLYVGSVPTLSFTLRSKEGPAPTEVNQGSLTSSWNVMVPG
                     IHVVPGLRVLAEIDPDRTIEESSESDNTFPADGQPRAVEVHQLPLFKVRLVPVLQQVN
                     GLQGNVTPALADRFLSDARILLPIAELNVDVRAPYSTSAPALQSDNANDAWGTVLSEL
                     RALKAADRDARYYYGVAKTSYSSGVGGIGYVGGNARTGLGWDRLPSGSYVMAHEVAHN
                     MGRSHAPCGVSGADPAYPHAGGKIGAWGFDPVWITLKDPGRWVDLTGYCNPYWVSAYS
                     WEGMMSYRQGGPSSSPREAEGRVGGAGLLVWGRITAKGPVLEPAFSVDEGAGMPAPGP
                     HRIEALAEDGSLLFSVPFGAGDVADLPTGPEEAFAFVLPRGQSVERIAQLRLVAGGRV
                     ALQRSRAGPVPAPSLSRDDSGVLQWDAARYPMVLVRDRITGEVLSFARGGKLRLPPTG
                     HDLELTFSDGVSSRRIKY"
     gene            5087..6379
                     /locus_tag="VGA78_08840"
     CDS             5087..6379
                     /locus_tag="VGA78_08840"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9894020.1"
                     /translation="MSSRRSFVATLAGAGALLPVFQEGAMARVLRAGGMAAGRSPEET
                     AEDEAYWSQIQRAFDTDHTLVNLNNGGVSPTPTHVLDAMIRDLRFSNELPVQHMWAVL
                     EPRIESVRRDLARDFGCDPEEMAITRNASESLEIMIFGLDLKPGDEVLVTNQNYPRML
                     TSWRQRARRHGIVLKEISFKVPPPSTEYLVDQFRAAITPRTRVIEVTHITNLTGQIMP
                     VREIVELARPRGIEVLVDGAHAYAHFPFRSGDLGCDYYGTSLHKWLLAPVGTGFLYVK
                     RDRIRGLWPLMAAPTEMDENIRKFEEIGTHPAANHNAISVALAFHRAIGADRKIARLR
                     YLRDRWAKRLLQESDRVRVLTPLDSPHSGAIGLFFVEGIDSPKLQSWLFEKHRIVTTP
                     IVHPEFHGLRITPNVYTSIDQIDLFAEKVLEAIRKGVA"
     gene            complement(6478..7497)
                     /locus_tag="VGA78_08845"
     CDS             complement(6478..7497)
                     /locus_tag="VGA78_08845"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9894021.1"
                     /translation="MSALPPVERFESNTGVRIYRISCQAFPRLITHVYLLVGAGPVTL
                     VDTGSGWGDATQELFAGLNAIRSDLGEPVGPADIERIIISHGHHDHFGGLVQFRGTLT
                     ARIGIHPLDRWVLTAYEERLLVATHAIRLFLRRAGCSPGKEQSLLDMYLSTKRLVRSQ
                     RVDFLLDEKQPVDGLEFIHVPGHCPGQVCIRVGDVLLTADHVLPRTTPHQSPESITAS
                     TGLRHYLESLEKVERLPGIRLCLGGHEHPFTDLAGRVAEIRADHVAKLERIKDHFDQT
                     GALTMDQLTDRMYPGVEGWNVLLAIEEVGAHVEYLYERGELAVVNLEELDGTETGGLQ
                     FRLRI"
     gene            7716..9971
                     /locus_tag="VGA78_08850"
     CDS             7716..9971
                     /locus_tag="VGA78_08850"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin receptor-like dimerization
                     domain-containing protein"
                     /protein_id="HEX9894022.1"
                     /translation="MLKRHVRTTLSLGFALTVVPFQEQTPIRGFTAESSRAQRDLERR
                     FRDLPSPDSLRSYMRRLTARPQHLGSPYGKDNAEWLVQRFKAWGFDAAIEEFEVLFPT
                     PRERRLELLAPTRFLARLTEPPVPGDTASAQQKEQLPTYNAYSIDGDVTGPLVFVNYG
                     VPADYERLERLGVSVKGAIVIAKYGGSWRGIKPKVAAEHGAIGCIIYSDPADDGYGPG
                     ETYPAGPFRPKDGVQRGSVMDMPLHPGDPLTPGVGATAQARRLPLEDAQTLTKIPVLP
                     ISYADAQPLLAALGGRTVPAEWRGGLPITYHLGPGPARVRLALRFNWDRVKLYNVIVR
                     IPGAITPDEWVIRGNHRDGWVNGAEDPISGLVPLMEELRAMSELMRSGWRPRRTIIYA
                     AWDGEEQGLLGSTEWAEAHADELRAKAVAYLNTDSNGRGFLYAAGSHTLQRFINEVAR
                     EITDPETRLTVWKRSQLAQLADGAAAYRAELRGGGDLRIPALGSGSDYSPFLQHLGIA
                     SLHLGFGGEGDNGIYHSIYDNFRHYTRFNDTSFVYGRALAQTTGSAVLRLGNAEVLPF
                     HFGGLSETVAGYRDEVKSLLSTRRDQAVERNRQLDEGVFQGASDPREPMRPPPRADVA
                     PAINFAPLDNGLTRLQQSAERYEAAFSRAGAKAGRPNDLNRVLLGLERTLGSPEGLPR
                     RPWYRHLIYAPGFYTGYGVKTLPGIREALEQGYWAEAERETARIAASLTAAAHAIDSA
                     AVLIEGPPGPK"
     gene            9983..11236
                     /locus_tag="VGA78_08855"
     CDS             9983..11236
                     /locus_tag="VGA78_08855"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9894023.1"
                     /translation="MLRPEVLTRLEEIGRVDLIVGIPSFNNARTIGHVVRAVSAGLAK
                     YFPEFSTLLVNSDGGSRDGTTEIVAREEFHAAGIMVAAPTRPLAKVITAYQGLPGKGS
                     AFRTIFEIAERLQAKACAVVDSDLRSITPEWIQLLLAPALHEDFDYVCPLYSRHKYDG
                     TITNAIVYPMVRSLFGKRVRQPIGGDFGFSGRLASHFLKYDVWGSDVARFGIDIWMTT
                     TALSGDFRICQSYLGAKIHDAKDPGADLTSMLVQVTAALLAQIEAHADHCLAMDGSEP
                     VPEFGFRYEVGLEPVPVNLKRMVEAFELGVREFDSIYAGFLGPDTRTGLAALIGQTPG
                     EFHMPTDLWVHLVYEFAAAYHHRHLPPEHLLKSLTPLYLGRTASWVVQAAPFGAHEVE
                     VELDALSARFEALKPHLRVRWHERR"
     gene            11240..11941
                     /locus_tag="VGA78_08860"
     CDS             11240..11941
                     /locus_tag="VGA78_08860"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894024.1"
                     /translation="MLQAQDSVWEPLRRFLDRSATLFPVLLAVIVVIAGGLIVAWMLD
                     LAIRTLLRTVGFDRLMHRPGVADALRRAGLARPPSAITGYIVRWVVVVFTLVAALSIL
                     SSEATDTVMGALVDYLPRLAAALLILVLGYAVSAFIARSVLLWAVNARVRGARWLARG
                     IQLLMAVFFGALALENLGFGRDVALVVLAILLGGGIFALALAYGLAGRDFARESLEVM
                     LREVRDEDRDTLSHL"
     gene            11949..13157
                     /locus_tag="VGA78_08865"
     CDS             11949..13157
                     /locus_tag="VGA78_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894025.1"
                     /translation="MSDFFQNGVIGTLHRLGQEPLERLETRLVEHAETAPIALVLPCL
                     VTELHGPALPRIVQQLSKVTYLNEIVVALDRADRWGFAEAREFFASLGPRCRILWIEG
                     PEVQDCIRLLSDSGLDIGTAGKGRATWLSLGYVLARETSRIIALHDADILTYDRNLLA
                     RLCYPLADPTLGYEYAKGYYSRVTDRMHGRVVRLFVTPLVRALTQLVGHVPLLDYMDS
                     FRYPLAGEFAMYADLARSVRIPGDWGLEVGMLYEVYRNTSVRRVCQVDVAENYDHKHQ
                     ALSLDDASTGLNRMARDIAKTLLRALAMEGVIFGAGFYTTLRIAYLRIAQDTVKVYDD
                     DATLNGLAFDRHAETAAIEMFVRALRRASDEFEADPMAYVGLPNWNRITSAIPDFLER
                     YRDAVDSQLD"
     gene            13157..13969
                     /locus_tag="VGA78_08870"
     CDS             13157..13969
                     /locus_tag="VGA78_08870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894026.1"
                     /translation="MANVLVFTDLDGTLVDAVDFSWDPARPGLRALTQRHIPLIFTSS
                     KTRPELESWRQRLGNTDPFISENGGALWLPSKWTPMPQRATAVGGGLHRVETGVPLAQ
                     LRVALREISAELGVRLRGFGDLSRDEVAEHAGLGGVALDHALAREYDEPFIPERPLTG
                     GEKARIAQLARARWLSITRGGRFYHLTGPTSKARAAQVLIEAMPGPVTIIALGDAPND
                     IEILQLAHHPIVVARPDRTHAEDLKRALPGALFTRGIGPSGFTEGILKVLEG"
     gene            complement(14076..15554)
                     /locus_tag="VGA78_08875"
     CDS             complement(14076..15554)
                     /locus_tag="VGA78_08875"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcineurin-like phosphoesterase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9894027.1"
                     /translation="MNRRAFLARSASIAAAVALPAPLRGDPYRPWTSLRAAGPVRIRG
                     RVVAGGRGVARAGVSDGITVVSSGADGSFDLVSEGAQPFVMLSPPPGFEIPTQATGTF
                     GLFQPIRADRNSEMAIRFELAPLRTSDDRHTFLVLADTQTQDQPEMARLHAETVPDVR
                     ATVGKLGEVPLFGVADGDIMYDDLALYAEYERAVGAMAIPFAQVVGNHDLDLTSDRDE
                     ASTATFQRHFGPTYYSFNRGRVHYVVLDDVFFYGGGYLGYLSDRQLTWLARDLARVEP
                     GAPVVVFLHIPLHSQLYARHNRPRPEISNTVTNREALVRLLEPYPARVISGHTHEMDH
                     RREGRVIEHTLGTVCGAWWTGDICYDGTPNGYAVFEVKGESFQWRYKATGQPDDHQIR
                     LYPRGADPRAPDEIVANVWNWDQAWTVTYRVNGESKGLMARRRGLDPRSASEHQGEDK
                     PAKRTWVDPVVTEHLFYAPVEQGTSVVVEARDPWGEVYRAQV"
     gene            complement(15723..16565)
                     /locus_tag="VGA78_08880"
     CDS             complement(15723..16565)
                     /locus_tag="VGA78_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894028.1"
                     /translation="MSSRPALAGVLLLAACAKTETRAPEQAAPPAPAAPPVVTVTAND
                     FAFEMPDTIASGPTVFRLINNGTELHHLQILRLLEGKTMADFAALPPGPTPEWIVEVG
                     GPNSSRPGGGQSETGLNLTMGTYLAVCFIPSPDGKPHIAKGMVKPFMVLPGAEASAAA
                     LPTPDLTMNLTDYTFELSGPITAGKHIIRVINQAEQPHEVVFARLAEGKTAQDLALWS
                     EKMEGPPPGEPIGGTVGLAQFVENYVIADFTPGEYALLCFLPDAKDGKPHISHGMVQQ
                     ITVN"
     gene            complement(16615..17139)
                     /locus_tag="VGA78_08885"
     CDS             complement(16615..17139)
                     /locus_tag="VGA78_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894029.1"
                     /translation="MSDEPDYLRRLRENQERRDRPAAGVTPRADTRSLTIQEREATKW
                     ARETAGTDLRAVKNLPGARYAVLLKVQSATGSTMISLEGLPTREALLERLKPGAGFGE
                     EIVASYEVRGGRPVTASTDAEGQIKLTMGPARPGANPVSPEKMLRQATAEAAVRAKTR
                     PRDTERSGRGRGGR"
     gene            complement(17218..>17485)
                     /locus_tag="VGA78_08890"
     CDS             complement(17218..>17485)
                     /locus_tag="VGA78_08890"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894030.1"
                     /translation="AAARRQTDVAIANLIGSNIFNLLGILGVAGLILPIPVSPAILRG
                     DVWWMLGTSALIYPLMRGGMKLSRKEGALLFGAYLLYVGLLLRG"
BASE COUNT         2905 a         6037 c         5720 g         2823 t
ORIGIN      
        1 tgacccgagt gctcgggttt gccctggcgt cggccggtac cgcccgggtg ctggggggcg
       61 ggttacggga ggtcgcggtc tccgccatgg tcggtaccgg catcggttct ctctcactgc
      121 tgtaggagct ttgaggatcg ggccgattac cggagcccgc gtaacaccac ccgccgcatg
      181 cctaccgcca aggcgtccgt cccatccccg gataacccca gcaaatagtc ctccaccggc
      241 gagtcgatcc ggacccaggc cacgccgtcc caccggagga gcacaccctc ttcaccaacc
      301 gcatagacat cggtcgggcc tgtaccccac accgcccgca ggtcggcgtc aaccgggctg
      361 gcctgacgat accagcgaac cccgtcgtat cgcaggatca ctccctcggc cccgaccgcg
      421 tgaacatcat ccggcgcgga gccccagacg ccacgcaaca ccacactggt cggggtcggc
      481 atcgaggccc agccctgccc gttccaccgc agcacggtgc cgctgtcgcc cacggcccag
      541 atgcgctgcc ggtcgagacc ccatacgtga cgcaggaact ccgccgtggg cgacgggtcc
      601 gccacccatt ggccggccgg cgaccggtga agaatggtgc cagactcgcc cacgatgagc
      661 tcgacgccat ccccggccca ggccgatcgc aagagcccgc ggacgggatt gggttcgtgc
      721 gaccaggtct cgccggtccg ccggaggatg gtgccggtat cgcccacggc cagcagctcg
      781 ccggtcccgg tcggcaccac gctgtagaga tcctggcggg tgccggtatt ctcccgttgc
      841 cacgccccgc cgctttcccg tagtaccgtt cccgatgtcc ccacggcgta ggcggtcgtc
      901 ccacttcgag cagcggcgaa gaggccgggc gagctcattg ccgcgctcca gctcccgccc
      961 tgtcgccgga ggaccgtgcc attccatccc gcggcgtaca gaacgtttcc cgcgatggac
     1021 acggcccgca ggttttccgc ggagatggac tgcggcacca gggtccagct gccgccgttc
     1081 caggccacca cgacgccgtc attccccacc gcgtagatct cgctgcccga acggccccat
     1141 atgccgaaca gatcggcccc ggtgggaccc gtaaccgtcg accaggtcag cccgtcgaag
     1201 cggagaatgg ttcccctgat cccgatgctc cacacgttgg aggtcgaggt cccatagagt
     1261 ccgaacagca ccaggggcgt gggactgtcc atggactgcc atccgacccc gttccatcgc
     1321 aacaacgcgc cgttctgccc cgaggcgaag aggttgccgg gatcgctgcc ccagatggcc
     1381 cacagctcgg gcatgccgct gagcggcaac ggcacccaga ccgagccttc ccgccgcagc
     1441 accgtgccga ccccgaccgc gtagacgtga tcggcgtcca gcccccagac ctccagcagg
     1501 agccgggtgt tggcgctcgc catccggctc cacccgacgc catcgtagtg gatgatcacg
     1561 ccggaatcgc ctaccgcata tacatcggtg ggacggctcc cccacacgcc gaccaggtcc
     1621 gccccggtcg gcacagtcat ccgttcccac ccgccgccac tggtatggaa cacggtgccc
     1681 gcctggccca ccacgaatgc ttcacccgag gcatcgctcc acagccccag caagctggcg
     1741 tcggtttcgc cttccgacgc gatgctccac cgcaggggca gcgcggcggg caccaccgtc
     1801 acccggagag aggcgctaac cgatccgctg gtggccgcga gggtcgcggt tccgggagct
     1861 acggccgtga tgcggccggc gtgatccacc cgggcgacgg ccgaggaaga tgaagaccac
     1921 tcaactaagg gattggggac cggagcgccg tccggatcgc tcgcgctcag ctcgggcgtg
     1981 agggtcgcac cgggttccag ccaggcggtg gcgggaatga tgtcgagctc ggcgacgtca
     2041 ccgggtccga gtcgatcccc caggcgacag ctcgccagca ggacggctac cgctgcagcc
     2101 ccgaggaggt gaccccggca ggtcatgcgg cacggggagc gagccggcgg aagaagcgga
     2161 gaatcagccc gtccatccat cgccggggca acaatgactg cagcagcagc cgcacccggg
     2221 cgtcacgtcc caccagatat cgagggcggg gccgcgctgc cgtgagtgcg tgatcgacca
     2281 cccgaaccac cgcttcgacc ggcaccgccc gccggggcgc gcgcgcgagc atttgcgcca
     2341 gagcggctcc catgccgccg tagcgggcct gtcccactgg cggcagccgg tcgatgacgg
     2401 atggccctcc ccgagtggcc ttttcccaga tgggagtgtc caccacgccg ggttcgacca
     2461 ggctgagata gaggcccagc ggcagaagct ccatccgaag cgcgtcgctc atcgcctcga
     2521 gagcatgttt ggaggcgcaa taggggccca gcagcggtgt cgtcacccgc ccggcgatgg
     2581 aaccgatgtt gacgatccgg ccgtggccgg catgaagcag aggcagaaac gcctgggtca
     2641 acgccagggt accgaagacg ttcacatcga actggcggcg gaactcgtca agcgggacat
     2701 actcgagcgg accgccccgg gcgatgccgg cgttgttgac caggccctga agcccggcgg
     2761 cgccgagttg gccggagagc ttcgccgccg ccgcggcgat ggactccggg tcggtgatgt
     2821 ccaagtgaag agggtgcagc cggggcgagc cctctacctc caggcgccga gcatcttcct
     2881 cgcgcctgac cccagcaaag accagccagc cggcccggtc gaaatgcagg gcgcaggcct
     2941 tcccgatacc gctcgaacag ccgctgatca gaacggaact ggacatcttc taaagctagt
     3001 acttgatccg tcggctgctg actccatccg agaaggtgag ctccagatca tggccggtgg
     3061 gggggagccg cagtttgccg cctcgggcga acgacagcac ctcgccggtg atgcgatcac
     3121 gaaccagtac catcgggtat cgggcggcat cccactgcag cactccgcta tcgtcccggc
     3181 tgagactggg ggccggtacc ggtcccgcgc gagagcgctg cagcgctact cgtcccccgg
     3241 cgaccagacg cagctgggcg atccgctcca ccgactgccc tcgagggagc acgaaggcga
     3301 acgcctcctc cggcccggtc ggcaggtccg cgacgtcgcc ggcgccgaat ggcacgctga
     3361 agagcagcga gccgtcctcc gccagggctt cgatccggtg ggggcccggc gccggcatcc
     3421 cggctccctc gtcgacactg aaggccggct ccagaaccgg acccttggcc gtgatgcggc
     3481 cccacaccag aagccccgct ccgccgactc gaccctcggc ctccctcggc gaactggagg
     3541 gaccgccctg gcgatagctc atcatgcctt cccagctgta ggcgctcacc cagtagggat
     3601 tacaatagcc ggtcagatcg acccaccgcc cgggatcctt cagtgtgatc cagaccggat
     3661 cgaatcccca cgcgccgatc ttgccgccgg cgtgggggta ggccgggtcc gcgccgctca
     3721 cgccgcaggg ggcatggctc cggcccatgt tgtgagccac ctcgtgggcc atcacgtacg
     3781 agccgctggg gagccggtcc catcccagcc ccgttcgtgc gtttccgccg acatagccga
     3841 tgcctccgac cccgctggaa taggaggtct ttgcgacccc gtagtaatac cgggcgtcgc
     3901 gatcggccgc tttcagggct cgcagctcac tcagcaccgt gccccaggcg tcgttcgcat
     3961 tatcgctctg caatgccggc gccgaggtgc tataaggcgc gcgcacgtcg acgttcaatt
     4021 ccgcgatcgg cagcaggatt ctggcgtcgg agaggaaccg gtcagccagg gccggcgtca
     4081 cattgccctg gagcccgttc acctgctgca acaccggcac cagacgaacc ttgaagagcg
     4141 gcagctggtg aacctcgacc gctcgcggct ggccgtccgc cgggaaggtg ttgtcgctct
     4201 cgcttgattc ttcgatggtc cgatccgggt cgatctccgc gaggacccgc agacccggga
     4261 ctacgtggat ccccggcacc atcacgttcc atgatgaggt caggctgccc tggttcactt
     4321 cggtcggggc aggaccttcc ttggatcgca gggtgaacga cagcgtggga accgagccga
     4381 catagagccg aacccgcacc gtgggccgga ccccagcccg gttgctggcg acgccaaaga
     4441 ctcgcaggta ggcgctccgc cccgcgacca gcgggacgga tccgtcgtag cgttggacgg
     4501 cctgggtcag atagaggccg tcgatgcgga ggttgaatcc ccccgccgtc gccgcggaag
     4561 ccgccgaata gctgacaccg gcggtggccg tcccgccggc cgagacgacg ccagtttgtc
     4621 cgtcgggggt cggcagaaac ctggttccgt cgcgagaaac cggcgcggcg gtgatgatgt
     4681 agttgccggt ctcgagaccg gtgagggtgg cggagtggct caagctgcga gtgtatccgc
     4741 ccgggcccga cacctgcacc gcggccggag tctcaagatt gagaccgtcg atcgccacca
     4801 ccagcgaccc cttgagctgg ggggcaacac cgccatcgcc cccacaaccg agagcgagaa
     4861 ggcacaggag aacgccgcac tgtcccggtt gggcgcggaa cagtcgctgc cgaagtcgtg
     4921 tcacctaaag gttgctatga caatctgtta gggagttgcc gctggccggg ccaccacgcc
     4981 aaagccggtt tctcactgct gcgttgcaca gctgatgccg ccccgccatc cttgcgttgg
     5041 accggtggga cctcgacaat tgagccatca ctctttggag gaccgcatgt cgagccgtcg
     5101 ctcgttcgtc gccacgctgg ccggcgcggg cgccctgctg ccggttttcc aggagggcgc
     5161 gatggcccgc gtgcttcgag cgggcgggat ggcggcgggc cggagtcccg aggagaccgc
     5221 cgaggacgag gcgtactgga gccagatcca gcgggccttc gacaccgacc acaccctggt
     5281 caatctcaac aacggcgggg tgagcccaac ccccacccat gtgctggacg cgatgatccg
     5341 cgacctccgg ttcagcaacg agctgccggt ccagcacatg tgggcggtgc tcgagccccg
     5401 gatcgaaagc gtccggcggg acctggcccg ggattttggc tgcgacccgg aggagatggc
     5461 cattacccgg aacgcgtccg aatcgctcga gatcatgatc ttcgggctgg acctcaagcc
     5521 gggggacgag gtcctggtca ccaaccagaa ctacccccgg atgctcacga gctggcgtca
     5581 gcgagcccgc cgtcacggca tcgttctgaa ggagatcagc ttcaaggttc cgccaccctc
     5641 cactgaatac ctggtcgacc agttccgggc cgccatcacc ccccgcaccc gggtcatcga
     5701 ggtgacccat atcaccaatc tcacgggcca gatcatgccg gtccgcgaga tcgtggagct
     5761 ggcccggccg cggggcatcg aggtcctggt cgacggggcc cacgcctacg cccatttccc
     5821 attccgctcg ggggacctgg ggtgcgacta ctatggtacc agcctgcaca agtggctcct
     5881 tgcgccggtc ggcaccgggt ttctttatgt gaagcgcgac aggatccggg ggttgtggcc
     5941 gctgatggcc gccccaacgg agatggatga gaatatacgg aaattcgagg aaatcgggac
     6001 ccaccccgcc gccaaccaca acgcgatctc ggtcgcgctg gcgtttcacc gggccatcgg
     6061 cgcggaccgg aaaatcgccc ggctccggta tctgcgagac cgctgggcca agcggctgtt
     6121 acaggagagt gaccgggtcc gggttctgac cccgctcgat tcgcctcact ccggcgccat
     6181 cgggctgttc ttcgtggagg ggatcgactc gcccaagctg caatcgtggc tgttcgagaa
     6241 gcaccggatc gtgaccaccc cgatcgtgca tccggaattt cacgggctgc ggattacccc
     6301 caacgtctat accagcatcg atcaaatcga tctgttcgcg gagaaggttc tcgaggccat
     6361 tcggaaaggc gttgcctgac tgcattgtcg attgaagatt gacgattggg ttctgcctgg
     6421 cccgcgagac tccgggcgaa gcaatcgtca atcatcaatc gtcaatcgtc aatgggttca
     6481 gatccgcagc ctgaattgaa gtccaccagt ttccgtgcca tccagctcct ccagattgac
     6541 gaccgccagc tcgccccgct cgtagagata ctccacgtgg gcccccacct cctcgatcgc
     6601 gagcaggaca ttccagcctt cgaccccggg gtacatccgg tcggtcagct gatccatggt
     6661 cagggcgccg gtctggtcga agtgatcctt gatccgctcc agcttcgcca cgtgatcggc
     6721 gcggatctcg gccacccgtc ccgccaggtc ggtgaacgga tgctcatggc cccccagaca
     6781 aagccggatc cccggcagcc gttccacctt ctcgagcgat tccaggtagt gccggagtcc
     6841 ggtcgaggct gtaatgctct cgggcgattg gtgcggcgtg gtacggggca ggacgtggtc
     6901 cgcggtcagc agcacatcgc ctacccggat gcacacctgg ccggggcaat gccccgggac
     6961 gtggatgaac tccaggccgt ccacgggctg tttctcgtcc agcaggaaat ccacccgctg
     7021 actccggacc agccgcttgg tcgacaggta catgtccagc agcgactgct ccttgcctgg
     7081 agagcagccg gcccgtcgca ggaagagccg aatggcatgg gtcgccacca gtagccgttc
     7141 ctcgtaggcg gtcaggaccc agcgatccag cgggtggata ccgatgcggg cggtgagggt
     7201 tccgcggaac tgtaccagac cgccgaagtg atcgtggtgt ccgtgcgaga tgatgatgcg
     7261 ctcgatgtcg gccgggccga ccggctcgcc caggtcactc cggatcgcgt tcaacccggc
     7321 gaacagctct tgggtcgcgt cgccccagcc gcttccggta tcgaccagcg tcaccggccc
     7381 cgccccgacc agcagataga cgtgcgtgat gagccgggga aaggcctgac agctgatccg
     7441 atagatccgg actccggtat tggactcgaa acgttcgacc ggcggcaagg cgctcatcgg
     7501 gttccaatct catcatgatg gggccacatt aaccacggga ccatacagtc gatccacaga
     7561 ttacccggat tcgagggatt ccacggatca atccggtgag ctgcgtacat ctcattccga
     7621 cggcaaagga tcctcgggta tggatccgtg tcatccgctg aatccatgta atccgtggat
     7681 gcagtccctg gtcaaactca accccggtca cccgcatgct caaacgtcac gtccggacca
     7741 cgctcagcct gggattcgcg ctcacagtcg ttccctttca ggaacaaact ccgatccgcg
     7801 gcttcaccgc cgagagcagc cgcgctcaac gggatctcga gcgtcgcttc cgagacctcc
     7861 cgagcccgga cagcctgcgc agctacatgc gccggctcac ggcccggcct cagcacctgg
     7921 gatcgcccta cggcaaggac aacgccgaat ggctggtgca acggttcaag gcctgggggt
     7981 tcgacgccgc gatcgaagag ttcgaggtcc tcttccctac gccgcgggaa cgccggctgg
     8041 agctgctggc accgactcgt ttcctggccc gcctgactga gccgccggtg ccgggcgaca
     8101 ccgcctcggc ccagcagaag gaacagctcc cgacctacaa cgcctattcc atcgatggtg
     8161 acgtgaccgg cccactggtc ttcgtgaact acggcgtacc cgcggattac gaacggctgg
     8221 agcggctggg ggtttcggtc aaaggcgcca tcgtcatcgc caagtacggc gggtcctggc
     8281 gcgggatcaa gcccaaagtg gccgccgagc acggggcgat cggatgcatc atctactccg
     8341 atccggccga cgacggatac gggccgggcg aaacctatcc cgccggtccg ttccgtccca
     8401 aggatggggt acagcggggc agcgtgatgg acatgccgct ccatccgggc gatcccctca
     8461 cgcccggcgt cggggccacg gcccaggccc ggcgtctccc cctggaagac gcgcagaccc
     8521 tgaccaagat cccggtcctc ccgatctcgt atgccgacgc ccagccgctg ctggcggcgc
     8581 tgggcggccg gaccgtaccg gccgagtggc ggggaggtct cccgatcacc taccacctcg
     8641 gccccggccc cgcgcgggtt cggctcgccc tccggttcaa ctgggaccgg gtcaagctct
     8701 acaacgtcat cgtgcggatc cccggggcca ttacgcccga cgaatgggtg atccggggca
     8761 accatcgcga tggctgggtg aacggggccg aggacccgat ctcgggcctg gtcccgctga
     8821 tggaagagct gcgggccatg tccgagctga tgcggagcgg ctggcgtccc cggcgcacca
     8881 tcatctacgc cgcgtgggac ggcgaggaac agggattgct gggcagcacc gaatgggccg
     8941 aggcgcacgc cgacgagctc cgcgccaagg cggtcgccta tctcaacacc gattcgaacg
     9001 ggcggggttt cctctacgcg gcggggtccc acaccctgca gcggttcatc aacgaggtgg
     9061 cccgggagat caccgacccc gagaccaggc tcacggtgtg gaagcggagt cagctggcgc
     9121 agctggccga tggggctgcc gcctaccggg ccgagcttcg gggcggcgga gacctccgga
     9181 ttccggccct ggggtcgggt tccgactatt ccccgttcct ccagcacctg ggcatcgcct
     9241 ccctccatct gggcttcggg ggagaaggcg acaacggcat ctatcactcg atctacgaca
     9301 atttccggca ttacacccgc ttcaacgata ccagcttcgt ctatggccgg gccctggctc
     9361 agaccaccgg cagcgccgtc ctccggctgg ggaacgccga ggttctgccc ttccacttcg
     9421 gcggactgag cgagaccgtc gccggctacc gcgacgaggt gaagagcctg ctgagcaccc
     9481 gccgggacca ggcggtcgag cgcaatcgcc agctggacga gggggtgttc cagggggcca
     9541 gtgatccgcg cgagccgatg cggcctcccc cgcgggccga tgtcgcgccg gccatcaact
     9601 tcgcgccgct cgacaacggg ctcacccggc tccagcagag cgccgagcgc tacgaggcgg
     9661 ccttcagccg ggccggcgcc aaggccggcc gccccaacga cctcaaccgc gtcctgctcg
     9721 gcctggaacg gacgttaggc agtccggaag gcctgccccg ccggccctgg taccgtcacc
     9781 tgatctatgc gccgggcttc tacaccgggt atggggtcaa gaccctgccc ggcatccggg
     9841 aggcgctgga gcaggggtac tgggccgagg cggagcggga gacggcgcgg atcgcggcca
     9901 gcctcaccgc ggccgcccac gccatcgact ccgcggcggt gctcatcgag gggccgccgg
     9961 ggccgaagtg aagcaggaga gcgtgcttcg ccccgaggtc ctgacccgcc tggaggagat
    10021 cggccgggtg gacctgattg tgggcattcc gtccttcaac aacgcccgga ccatcgggca
    10081 cgtggtacgg gcggtgagcg ccgggctggc caagtatttc cccgagttca gcacgctgct
    10141 ggtcaactcc gacggcggct cccgcgacgg caccaccgag atcgtcgccc gcgaggaatt
    10201 ccacgcggcc gggatcatgg tggcggcgcc gacccggccg ctcgccaagg tcatcaccgc
    10261 ctatcagggc ctaccgggca agggcagcgc cttccgcacc attttcgaga tcgcggagcg
    10321 gctgcaggcg aaggcctgcg cggtggtcga ctcggacctg cggagcatca cgccggagtg
    10381 gatccagctc ctgctggccc cggcgctgca cgaggatttc gactacgtgt gcccgctcta
    10441 cagccggcac aagtacgacg gcaccatcac caacgcgatc gtctacccca tggtccggtc
    10501 cctgttcggc aaacgggtcc ggcagcccat cggcggcgac ttcggcttct cgggacggct
    10561 ggcctcccac tttctcaagt acgacgtgtg ggggagcgac gtcgcccgct tcggcatcga
    10621 tatctggatg acgaccacgg cgctgtcggg tgacttccgg atctgccagt cgtacctggg
    10681 cgccaagatc cacgacgcca aggatcccgg ggccgatctc accagcatgc tggtgcaggt
    10741 gaccgcggcc ctgctggcgc agatcgaagc ccatgccgac cactgtctgg cgatggatgg
    10801 ctccgagccg gtcccggaat tcggcttccg ctacgaggtg ggactcgagc cggtgccggt
    10861 caacctcaag cgcatggtgg aggcgttcga gctgggggtg cgagagttcg actcgatcta
    10921 cgccggcttt ctcggccccg acacccggac cggtctcgca gccttgatcg ggcagacgcc
    10981 gggtgagttc cacatgccga ccgatctctg ggtccacctg gtctacgagt tcgcggcggc
    11041 gtaccatcac cggcatctgc ccccggagca cctgctcaag agtctgaccc cgctctatct
    11101 tggccggact gcctcctggg tggtgcaggc cgcaccattc ggcgcccatg aggttgaggt
    11161 agagctcgac gcgctgagcg ccagattcga ggccctcaag cctcatctgc gcgtccgttg
    11221 gcacgagagg agataactga tgctgcaagc tcaggattcc gtgtgggagc ccctccggcg
    11281 cttcctggac cgctcggcga cgctgttccc cgtcctgctt gcggtgatcg tggtcatcgc
    11341 cgggggcctg atcgtggcat ggatgctgga tctggcgatc cgaaccttgt tgcggaccgt
    11401 cgggttcgac cggctgatgc accggccggg ggtggccgac gcgctgcgac gggccggcct
    11461 ggcccggccc ccctccgcca tcaccggcta catcgttcgc tgggtggtgg tggtcttcac
    11521 cctggtcgcg gcgctgtcca ttctgagctc cgaagcgacc gacacggtca tgggcgcgct
    11581 ggtggactat ctgccccggc tggccgccgc cctgctgatc ctggtgctgg gctacgccgt
    11641 gagcgccttc atcgcccgca gcgtgctgct ctgggcggtg aatgcccggg tccggggagc
    11701 ccgctggctg gcccgcggca tccagctgct gatggcggtg ttcttcgggg ccttggccct
    11761 ggagaatctg gggttcgggc gggacgtggc gctggtggtg ctggccatcc tgctgggcgg
    11821 cggcatcttc gcgctggcgc tggcgtatgg cctggcggga cgggacttcg cccgggaatc
    11881 acttgaggtc atgctgcgcg aagtccggga cgaggaccgc gacaccctgt cgcacctgtg
    11941 agcgcgcgat gagcgatttc tttcaaaacg gcgtcatcgg cacgctgcac cggctgggcc
    12001 aggagccgct ggagcggctg gagacccggc tggtcgagca cgccgagacg gctccgatcg
    12061 cgctggtgct gccctgcctg gtcaccgaac tccatggccc ggccctgccg cgcatcgtgc
    12121 agcagctgtc gaaggtcacc tacctcaacg agatcgtggt ggcccttgac cgcgccgacc
    12181 gctggggctt cgccgaggcg cgggagttct tcgcgtcgct gggacctcgc tgccggatcc
    12241 tctggatcga aggaccagag gtgcaggact gcatccggct cctgtccgac agcgggctcg
    12301 acatcggcac cgccgggaag ggccgagcca cctggctctc cctgggctac gtgctggccc
    12361 gggaaaccag ccgcatcatc gcgctgcacg acgccgatat cctcacctac gaccgcaacc
    12421 tgctggctcg gctctgctac cccctggccg accccaccct cggatacgaa tacgccaagg
    12481 ggtattacag ccgggtcacc gaccggatgc acggccgggt ggtgcggctg ttcgtcacgc
    12541 ccctggtccg ggccctgacc cagctggtcg gtcacgtgcc gttgctcgat tacatggaca
    12601 gcttccgcta ccctctggcg ggagagttcg ccatgtatgc cgatctggcg cggtcggtcc
    12661 ggatcccggg ggactggggg ctcgaggtcg ggatgctgta cgaggtgtac cgcaacacct
    12721 cggtccggcg ggtctgccag gtcgacgtgg cggagaacta cgatcacaag caccaggcct
    12781 tgtcgctgga cgatgcctcg accgggctca accgcatggc gcgcgacatc gccaagaccc
    12841 tgctccgggc cctcgccatg gaaggggtta tcttcggggc gggcttctac accaccctca
    12901 gaattgcgta ccttcggatt gcccaggaca ccgtgaaggt ctacgacgac gacgccaccc
    12961 tgaacgggct cgcgttcgat cggcatgcgg agaccgctgc gatcgagatg ttcgtccgcg
    13021 cgttgcggcg ggccagcgac gagttcgagg ccgacccgat ggcctacgtt ggcttgccca
    13081 actggaaccg cattacctcg gcgatcccgg atttcctgga gcggtatcgc gacgcggtgg
    13141 actcgcagct cgactgatgg ccaacgtcct ggtcttcact gatctcgatg ggaccctggt
    13201 cgacgcggta gacttctcct gggacccggc ccggcccggt ttgcgggccc tcacccagcg
    13261 gcacatcccg ctcatcttca ccagcagcaa gacccggccg gaactggagt cgtggcgcca
    13321 gcggctgggc aacaccgatc ccttcatcag cgagaacggg ggtgcgctct ggctgccctc
    13381 caagtggacc ccgatgccac agcgcgccac tgcggtgggc ggcggcctgc accgggtcga
    13441 gaccggggtg cccctggcgc aactgcgcgt ggcgctgcgc gaaatcagcg ccgagctggg
    13501 ggtcaggctg cgggggttcg gcgacctctc gcgcgacgaa gtggcggagc acgcgggact
    13561 gggtggcgtc gccctcgatc acgccctggc ccgggagtac gacgagccct tcatcccgga
    13621 gcggcccctg accggaggtg agaaagcccg gatcgcgcaa ctggcccggg cccggtggct
    13681 ttccattacc cggggcggcc ggttctacca tctcaccgga ccgaccagca aggcccgcgc
    13741 ggcccaggtc ctgatcgagg ccatgccggg cccggtgacc atcatcgcgt taggtgacgc
    13801 ccccaacgac atcgagatac tgcagctggc gcatcacccg atcgtggtgg cccggccgga
    13861 tagaacccat gcggaggacc tcaaacgggc cttgcccggg gccctgttta ccaggggcat
    13921 tggaccttct ggattcacag aggggatact gaaggtgttg gaggggtgaa tcaatagaga
    13981 atgccgagtg cccagtggcc attgcagagg gatggaagca tccagcccgc ttccccgttg
    14041 ccatcggcat tgggcactcg gcattcccca ctgactcaga cctgagcccg gtatacctct
    14101 ccccacggat cccgcgcctc caccaccacg ctcgtccctt gctccaccgg cgcatagaag
    14161 agatgctcgg tcacgaccgg atccacccag gtccgcttgg ccggcttgtc ttctccctga
    14221 tgctctgacg ccgaccgggg atcgagtccc cgccggcggg ccatcagacc tttggactcc
    14281 ccgttcacgc gataggtcac cgtccaggcc tgatcccagt tccacacatt ggcgacgatc
    14341 tcgtcaggag cgcgtgggtc ggccccgcga ggatagagcc ggatctggtg atcgtcgggc
    14401 tggccggtgg ccttgtagcg ccactgaaac gactctccct tcacctcgaa gacggcgtat
    14461 ccgttcgggg tgccatcgta gcagatgtcg ccggtccacc aggcgccgca gaccgtgccc
    14521 agcgtgtgct cgatgacccg gccttcccgg cggtgatcca tctcgtgggt gtggcccgag
    14581 atcacccgag ccgggtacgg ctccagcaga cggaccagcg cctcgcggtt ggtgaccgtg
    14641 ttgctgatct cgggacgggg ccggttgtgc cgggcataca gctggctgtg gagcggaatg
    14701 tggaggaaga ccaccaccgg agcccccggt tccacccggg ccaggtcccg agccagccag
    14761 gtgagctggc gatcggagag gtaacccaga tagccgcccc catagaagaa cacgtcatcc
    14821 agcacgacgt agtgcacccg cccccggttg aaggagtagt aggtgggacc gaagtgacgc
    14881 tggaaggtgg cggtggaagc ttcatcccgg tccgaggtga gatccagatc gtggttgccg
    14941 accacctgcg caaagggaat ggccatcgcc ccgaccgcgc gctcgtactc ggcgtagagc
    15001 gccagatcgt cgtacatgat gtcgccgtcg gccaccccga agagaggcac ctcccccagc
    15061 ttcccaacgg tcgcccggac atcgggcaca gtttccgcgt gcaaccgcgc catctccggc
    15121 tggtcctggg tctgggtatc cgccagcacc agaaaggtat gccggtcatc agaggttcga
    15181 agcggcgcca gctcgaagcg gatcgccatc tcgctgttcc ggtcggcccg gatcggctgg
    15241 aacaggccga aggtcccggt cgcctgggtg ggaatctcga accccggggg cggcgataac
    15301 atgacaaacg gctgggcccc ctcggacacc agatcgaagg agccgtccgc tccgctgctc
    15361 actacggtga tcccatcgct caccccggcc cgggccaccc cccgaccccc ggctaccacc
    15421 cgtccccgaa tccgaaccgg gccggcggct cgcagagaag tccagggccg atagggatcg
    15481 ccccgcaggg gagccgggag cgccacagcg gcggcaatcg aggcggatcg cgccaggaag
    15541 gctcggcggt tcattgacgg acggaccgac ggactgacgg acggacggac cgtccgcccc
    15601 gccccttccg aaacggacgg acggaccgtc cgcctcgccc catctggaat gcgatcctcg
    15661 ctatccacgc gtcgccagcc gttctgctcg tgagtccgtc tgtccgtcag tccgtccgtc
    15721 cgtcagttca ccgtgatttg ctgcaccatg ccatgagaga tgtgcggctt gccatccttg
    15781 gcgtcgggca ggaagcagag cagggcgtat tcgcccggcg tgaaatcggc gatgacgtag
    15841 ttctccacga attgcgccag acctaccgtc ccgccgatcg gctctcccgg tggcggacct
    15901 tccattttct ccgaccagag ggccagatcc tgggccgttt tcccctcggc cagccgggcg
    15961 aacaccactt catgaggctg ctcggcctga ttgattactc ggatgatatg ctttccggcg
    16021 gtgatcgggc cggagagctc gaacgtgtag tcggtcagat tcatcgtcag atcgggcgtg
    16081 ggcagcgcag cggccgaggc ctcggcaccc ggcagcacca tgaacggctt caccatcccc
    16141 ttggcgatgt gcggttttcc atcgggagac gggatgaagc acaccgccag gtaggtcccc
    16201 atcgtcaggt tcaacccggt ctcgctctgt ccgccgccgg ggcgggaact gttgggcccg
    16261 cctacctcga cgatccattc cggagtcggg ccggggggaa gcgcggcgaa gtccgccatg
    16321 gtcttccctt cgagcaaccg caggatctgc aaatgatgca gctcggtgcc gttgttgatc
    16381 agccggaaca ccgttgggcc cgaggcgatg gtgtccggca tctcgaaggc gaagtcgttg
    16441 gcggtgacgg tcacgaccgg gggagccgct ggcgcgggtg gggccgcctg ctccggagcc
    16501 cgggtctcgg tcttggcaca cgccgccagt aacaggacac cggcaagggc ggggcgggac
    16561 gacatgcggc tggatgcctc tttcaggtag gcggagagac agaaagggcg gcctctaccg
    16621 gccgcccctg ccccgtcccg agcgctcggt atcgcggggc cgagtcttgg ctcggaccgc
    16681 cgcttcggct gtggcttgtc gcagcatctt ctcggggctg accggattcg cgcccggacg
    16741 agccggtccc atggtgagct tgatctggcc ttccgcgtcg gtcgaggccg tgacaggccg
    16801 accaccccga acctcgtagg atgccacgat ctcctcgccg aaaccggcac ccggcttgag
    16861 ccgctccagc agggcttccc gggtgggcag gccttcgagc gagatcatgg tcgacccggt
    16921 ggcactctgg actttgagca ggaccgcgta gcgcgccccg ggcaggttct tgactgcccg
    16981 aagatcggtg cccgcggtct cccgggccca tttggtggcc tctcgttcct gaatggtcag
    17041 tgaccgggtg tccgcgcgcg gagtcacgcc ggcggcaggg cgatcacgac gctcctggtt
    17101 ttcccggagg cgccggaggt aatctggctc gtcagacatg gactttctcc cggcatcacg
    17161 ccgttggcga caggcgctta cgatagtcgg cccttcgccc ggtcggaagc cccagcgtca
    17221 gccgcggagc agcaatccga catacagcaa gtaagccccg aacaggagcg caccttcctt
    17281 gcgggagagc ttcatccccc cccgcatcag cggatagatc agagctgagg tgcccagcat
    17341 ccaccagacg tcgccccgga gaatggccgg ggataccggg atcggcagga tcaggccggc
    17401 cacgcccaga atccccagca ggttgaaaat gttggagccg atcagattgg cgatcgcgac
    17461 gtcggtctga cgccgagccg cggcc
//
LOCUS       DASWKS010000310         7053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2396005, whole genome shotgun sequence.
ACCESSION   DASWKS010000310 DASWKS010000000
VERSION     DASWKS010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2396005"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VGA78_08895"
     CDS             <1..572
                     /locus_tag="VGA78_08895"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX9894031.1"
                     /translation="PVWKALHMGVYGAYGLLLLHVTLGELQAQQSRVGEAALLGGAVL
                     VFGLHLVAGLREWRRDALLASDPAGWVDVGAVSDIPEGRAIGAIVGGDRVAVYRHQGR
                     LSGVSGVCKHQNGPLAEGRIIDGCITCPWHGYQYRPEDGRSPPPFDDRIATYRLQIRH
                     GRVLVLETPNPPGTHVNPVSAGLGGEEVS"
     gene            569..1324
                     /locus_tag="VGA78_08900"
     CDS             569..1324
                     /locus_tag="VGA78_08900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894032.1"
                     /translation="MNRDPRLEADQEFYVGYSPQAPPGIARFVRYRVGLILGLAVFTT
                     VLLAWNQKRPDPSVFEYGNTRQFSGLLRERPYPMVFTADSGAIRTWLLAAEDKHGADR
                     LVAGLDGQWVSFDATRLHRGSSGMLELTEHTGPAEGALAPLAGEDLGVVVITGEIVDS
                     KCWIGAMNPGEGPTHRLCALRCLRGGLPPMLTGHDEGGTPVAALLVGPDGDRMDSVLS
                     YVATPVRVTGRLRRLGTLMVLESDPTSIQRVHP"
     gene            1321..2148
                     /locus_tag="VGA78_08905"
     CDS             1321..2148
                     /locus_tag="VGA78_08905"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HEX9894033.1"
                     /translation="MIGPSTAPESTRTAPASPVAAYPVSPASLPPDLVCGGAYDVRFA
                     RSPADLDAILRLRFEVFNLELEEGLVESYVTGRDQDELDWRFHHLMICLRETGDVVGT
                     YRMQTPEMAALHGGFYTAGEFDLSRVPATVMQRSIEIGRACVAREHRNGRVLHSLWRG
                     LAAYLAWNRKTGLFGCCSLTTQDPGLGLATWRHLETRGCMERRFTVAPLPGLECAVEP
                     GSLLPPPHVPALFQSYLSLGAKVCGPPAIDRRFRTIDFLVLLDVRDLDPRIFKTFFG"
     gene            2145..2930
                     /locus_tag="VGA78_08910"
     CDS             2145..2930
                     /locus_tag="VGA78_08910"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9894034.1"
                     /translation="MSGLADRLRQTLRLMLVGLWTTASYLLWLPVAVVVLPFGRWSRR
                     WNEFAIKLWTRGLVTAMGIQVEVVGIPPRKPFFLVSNHLSYVDILVLGSRLGPTFISK
                     QEIAGWPVLGHLARVTGTIFVNRERKRDAVRVLDEIDRAVASGAGVVLFPEGTSHRGD
                     RVYPLKSALLQWAAKRGYPVHAAAVRYATGDPARPAVDSVCWWGDMTFGPHLLKLLTL
                     PRVRATIAFAQDPVVERERTALAAGLHAALERTFTPIPAVEGV"
     gene            2932..3441
                     /locus_tag="VGA78_08915"
     CDS             2932..3441
                     /locus_tag="VGA78_08915"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9894035.1"
                     /translation="MRRPVPLEGNLHLLRQGIELLGRLPDSAYMDAAPDRSTVGAQYR
                     HILDHYRCLLDGLTAGEVDYDQRLRDPEVERDRGAATRATQELLDRLRLLSRSHLGLP
                     LRVLQSAGDTEPEEPQGSSLGRELLFLVSHTVHHYAIIKLLLGERGVDCDANFGVAPS
                     TLAYRRAAG"
     gene            3441..4151
                     /locus_tag="VGA78_08920"
     CDS             3441..4151
                     /locus_tag="VGA78_08920"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HEX9894036.1"
                     /translation="MCTLSWIRRLDGYHVFFNRDERRTRAPGLAPEHHERGGVHWLAP
                     RDAESQGTWIGANDRGLALAILNRWHESPIATEGPWTSRGLLVRDLLDAPSIAAVKHR
                     LEGADLSVYQPFTLAAFEPGLDLSVFAWNGRAPVLDQVPDTGLVLTSSGYDQEAALRR
                     ADQFARYSDPSPDQFEAVHASHQPVRGPLSVCMHRPEAETVSYTRIDVNPVRIVMGYV
                     PGPPGETTERVTSALDAA"
     gene            4141..6744
                     /locus_tag="VGA78_08925"
     CDS             4141..6744
                     /locus_tag="VGA78_08925"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9894037.1"
                     /translation="MPPKPYLRWALLIYAALLVASHAVRWIRPYQPTPSRDERIVAVS
                     EIRGAVQTGRTVRMATIDSGTAESDRLPIVLLHGSPGDNGEVREIAGILSHTRRAVGP
                     DLPGFGASSRRIPDYSILAHAGYVEQLLDSLGIRRYHVVGFSLGGGVAIHLANQHPER
                     VESITLLSSIGVQEFELLGDYLLNHALHGIQLVGISLVLEGTPHFGWLDDAFFGMEYA
                     RNFYDTDQRPLRGMLEQYAGPMLILQGEGDILVPPSIAIEHGRIVPQSEVHLIPGDHF
                     MAFARADEMAGFISDFVLRAESGRAATRATADPTRLVRSTRPFDPATAPRPVGFSVAI
                     VLLLLTAATLVSEDLACLAAGLLVGRGTIGFFPAVAACMAGIVGGDLLLYLLGRWVGR
                     RAITMAPLRWFVNEADVTRSSRWFAKRGTWIVLASRFMPGTRLPTYVAAGMLHTRLAA
                     FLVAFVVASALWVPALVGGAAVFGGQLLDWFSGYGRLAGAAFLAGLVLLYLVVKSATH
                     LATWRGRRLLLSSWRRLTRWEFWPLWAFYPPVVLYIAWLCLKHRSPTLFTCANPAMPG
                     GGLVGESKHAILEDLGPGPEIARSILLPATDPLDDRLRQLERFVAAEKLTWPLVLKPD
                     VGERGLGVDFARDPSEARGYLLDASYDVIVQERLDGPEFGVFYFRVPGEAAGRIFAIT
                     EKHLPDVVGDGHRTLEQLILSDDRAVCSARFFLRQHADRLDWVPFLGEKVALTRLGTH
                     SRGALFLDGAGLITPALEAAVDRLSRRNGGFWFGRYDLRTASAESLMAGGPFKVLELN
                     GVSSEATSIYDPSHSLLQAYRTLFAQWKLAFEIGRRNRATGATPTPLPALLALFRKHR
                     NATRAARGNPR"
     gene            6763..>7053
                     /locus_tag="VGA78_08930"
     CDS             6763..>7053
                     /locus_tag="VGA78_08930"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9894038.1"
                     /translation="MITIAPVSLEGQGIRLEPLRPEHQEPLAAAAADGRLWELRVTSV
                     PEPDQVQSYVAAALAGQMEGRMLPWAVRELGGGTIVGSTRYHDIVVEIDRVEI"
BASE COUNT          984 a         2387 c         2414 g         1268 t
ORIGIN      
        1 ctccggtctg gaaggcgctg cacatgggcg tgtacggcgc ctacggcctg ctgctgctgc
       61 atgtgaccct gggcgagctg caggcccagc agagccgggt gggggaagcc gcgctgctgg
      121 gcggcgccgt gctggtgttc gggttgcatc tggtggccgg gttgcgcgaa tggcgccgcg
      181 acgcgctcct cgcgtccgac ccggccggct gggtcgacgt gggcgcggtg agtgacatcc
      241 ccgaaggacg agccatcggc gcgatagtcg gcggcgaccg ggtggccgtc taccggcacc
      301 agggcaggtt gtcgggcgtg tccggggtct gcaagcacca gaacggaccg ctggcggaag
      361 gtcgcatcat cgacgggtgc atcacctgtc cctggcacgg gtaccagtat cgccccgaag
      421 acggcagatc gccgccgccc ttcgatgatc ggatcgccac ctaccggctc cagattcgcc
      481 acggacgcgt gttggtgctg gaaactccca acccgccagg cacccatgtg aaccccgtga
      541 gcgccgggtt gggtggcgag gaggtctcgt gaaccgcgac ccgcgactcg aagccgacca
      601 ggagttctac gtcgggtatt cgccccaggc accgcccggc atcgcccggt ttgtgcggta
      661 ccgggtgggg ctgattctgg gtctggcggt tttcaccacc gtgctcctgg cctggaacca
      721 gaagcggccc gatccgtccg tattcgaata cggcaatacc cgccagttct cgggcttgct
      781 gcgggagcgg ccctatccca tggtgttcac cgccgacagc ggcgccatcc ggacctggct
      841 gctggccgcg gaggacaaac acggggccga ccggttggtg gccgggctcg acgggcagtg
      901 ggtcagcttc gacgccaccc ggctccatcg gggcagctcg gggatgctgg agctcaccga
      961 acacaccggc cccgctgagg gcgctttggc cccgctggcc ggagaggatc tgggtgtcgt
     1021 ggtcatcacc ggtgagatcg tcgacagcaa atgctggatc ggcgcgatga acccgggcga
     1081 aggtccgacc caccggctgt gcgccctccg ctgccttcgg ggcggacttc ctcccatgct
     1141 gacgggccat gacgagggtg ggacgccggt ggctgccctg ctggtcggcc cggacggtga
     1201 ccggatggac tcggtgctgt cgtatgtggc gaccccggtc cgtgtgaccg ggcggttacg
     1261 gaggctcggt acgctgatgg tgctggaatc cgaccccact tccatccaac gggtgcatcc
     1321 atgatcggac cgagcacggc tccggaatcg acccgcacgg ctcccgcctc accggtcgcg
     1381 gcctatcccg tttccccggc cagccttccc cccgacctcg tctgcggcgg cgcctacgac
     1441 gtgcggtttg cccgctcccc ggccgatctg gacgcaatcc tgaggcttcg gttcgaagtg
     1501 ttcaacctcg agctggaaga agggctggtc gagtcctacg tcaccggtcg tgaccaggac
     1561 gagctcgatt ggcgtttcca ccacctgatg atctgcctgc gcgagaccgg cgatgtggtc
     1621 ggcacttacc ggatgcagac ccccgagatg gccgcgctgc acggagggtt ctataccgca
     1681 ggcgagttcg atctgagccg ggtgcccgcc acggtcatgc agcggtcgat cgagatcggt
     1741 cgcgcctgcg tggcccggga gcatcggaac ggccgagtac tgcattccct ctggcgcggc
     1801 ctggccgcgt acctggcctg gaaccggaag accgggctgt tcggttgttg ttcgctcacc
     1861 acccaggatc ccgggttggg actggcgacc tggcgccatc tcgagacgcg ggggtgcatg
     1921 gagcgccgtt tcaccgtcgc gccgttgccc gggctggagt gcgccgtgga gccgggaagc
     1981 ctgctgcccc cgccccacgt gccggccctg ttccagagtt acctgtccct gggcgcaaag
     2041 gtctgcggcc ctcccgcgat cgaccggcgt tttcgcacca tcgattttct ggtgctgctc
     2101 gacgtgcgcg atctcgatcc caggatcttc aagacctttt tcggatgagt ggactcgctg
     2161 accggctgcg gcagaccttg cgattgatgc tggtgggtct gtggaccacg gccagctacc
     2221 tgctgtggct gccggtggcc gtggtggtcc tgccgttcgg ccggtggtcc cggcgctgga
     2281 acgagttcgc gatcaagctg tggacccgag gcctggtgac cgcaatggga atccaggtcg
     2341 aggtcgtcgg tattccgccc cgcaagccgt tttttctggt gtccaaccac ctgagctatg
     2401 tcgacatcct ggtgctgggc tcgcggctcg gtcccacctt catctccaag caggagatcg
     2461 ccggctggcc ggtgttgggc cacctggcgc gggtgaccgg gaccatcttc gtgaatcggg
     2521 aacgcaagcg cgacgcggtc cgggtgctgg acgaaatcga ccgggccgtc gcgagtgggg
     2581 ccggcgtggt gctctttccc gagggaacca gccaccgcgg cgatcgggtg tatcccctga
     2641 agtcggcgct gctccagtgg gcggcgaagc ggggctatcc ggtccacgcc gcggcggtgc
     2701 gatatgccac cggcgacccg gcccgaccgg ccgtggattc ggtctgttgg tggggcgaca
     2761 tgactttcgg ccctcacctg ctcaaactgt tgaccctgcc ccgggtccgt gccaccattg
     2821 cctttgcgca ggacccggtc gtggagcgcg agcgcaccgc cctggcggcc gggctccatg
     2881 ccgccctgga gcggaccttc acccctatcc cggcagtcga gggagtctga catgcgtcgg
     2941 cccgtacccc tcgaggggaa cctgcacctg ttgcgacagg gcatcgagct gctcgggcgc
     3001 ttgcccgact ccgcctacat ggatgcggct ccagatcgga gcacggtggg tgcccagtac
     3061 cgccacatcc tggatcacta tcgctgtctc ctcgacgggc tgaccgccgg cgaggtggac
     3121 tacgaccagc ggctccgcga tccggaggtc gagcgggatc ggggggccgc cacccgtgcc
     3181 acccaggagc tgctggaccg gctgcggctc ctgtcgcggt cgcatctggg tctgccgctc
     3241 cgggtccttc agtcggccgg cgacaccgag cccgaggagc cgcagggttc ctcgctgggc
     3301 cgggagctgc tgttcctggt gagtcacacc gtgcaccact acgccatcat caagctcctg
     3361 ctcggcgagc ggggagtgga ctgcgacgcg aacttcggag tggcgccgtc cacgctcgcg
     3421 tatcgccggg cggcggggta atgtgcaccc tttcctggat ccgtcgcctc gacgggtatc
     3481 atgttttctt caatcgggac gagcgccgca ctcgtgcgcc agggctggca ccggagcatc
     3541 acgagcgcgg tggagtgcac tggctggctc cccgcgacgc tgaaagtcag ggcacctgga
     3601 tcggcgccaa tgaccgcggc ctggccctcg ccattctgaa ccgctggcac gaatcaccca
     3661 tcgccacgga aggaccctgg accagccggg gactgctggt tcgggatctg ctggacgcac
     3721 cgtcgatcgc cgcggtgaag caccggctgg aaggcgccga tctgtcggtc tatcagccct
     3781 tcacgctggc cgccttcgag cccggcctgg acctgagtgt cttcgcctgg aatggtcgcg
     3841 ctccggtgct cgaccaggtg ccggacaccg ggctggtgct caccagctcg gggtatgacc
     3901 aggaggccgc gctgcgccgc gccgatcagt tcgcccggta ttccgatcct tctcccgacc
     3961 agttcgaggc cgtccacgcg agccaccagc cggtgcgggg tccgctctcg gtgtgcatgc
     4021 accgtcccga ggccgaaacc gtgagctaca cccggatcga cgtgaacccg gtccggattg
     4081 tgatggggta cgtgcccggc ccgccgggcg aaaccaccga acgggtgacc tcggctctgg
     4141 atgccgccta agccgtacct ccgctgggcc cttctcatct acgcggcgct gctggtcgcg
     4201 tcgcatgccg ttcgctggat ccggccctac cagccgacgc cgagccggga cgagcggatc
     4261 gtcgcggtct ccgaaatccg gggcgcggtc cagaccggcc gcaccgtccg catggcgacg
     4321 atcgactccg gtaccgcgga gtctgatcgg cttcccatcg tgctgttgca cggcagcccg
     4381 ggtgacaacg gagaggttcg ggagatcgcg ggaattctgt cgcacacccg ccgcgcggtc
     4441 gggcccgatc tgcccggctt cggcgcctcc tcgcgccgta tccccgacta ttcgatcctg
     4501 gcccacgcgg gatacgtcga gcagctgctc gactcgctcg gcatccggcg ctatcacgtg
     4561 gtcggcttca gcctgggcgg cggggtcgcg attcatctcg cgaaccagca tcccgagcgg
     4621 gtcgagtcga tcacgctgct ctcctccatc ggagtgcagg agttcgagct gctgggcgat
     4681 tacctgctga accacgccct gcacggcatc cagctggtcg gcatttcgct ggttctggag
     4741 ggtacccctc acttcgggtg gttggacgac gcgttctttg gcatggagta cgcccgcaat
     4801 ttctacgaca ccgaccagcg acccctccgg ggcatgctgg agcaatacgc cggtccgatg
     4861 ctcatcctgc agggcgaggg cgacatcctg gtgccgccgt cgatcgcgat cgagcacgga
     4921 cggatcgtac cgcaaagcga ggttcacctc atccccggcg atcatttcat ggcctttgcg
     4981 cgggccgatg agatggccgg gttcatctcg gattttgtgc tgcgggccga gtcgggacga
     5041 gcggcgaccc gggccaccgc cgatcccacc cggctggtcc ggtcgacccg tcccttcgac
     5101 ccggccacgg ccccgcggcc ggtgggcttc tccgtcgcca tcgtgctgtt gctcctgacc
     5161 gccgccacgc tggtgagtga agacctcgcc tgcctggcgg ccggtttgct ggtgggacgc
     5221 ggcaccattg gcttcttccc cgccgtggcc gcctgtatgg cgggcatcgt cggcggcgat
     5281 ctgctgctct atctgctggg tcgctgggtc ggtcgacggg cgatcacgat ggcaccgctc
     5341 cgctggttcg tgaatgaggc cgatgtcacc cgcagcagcc gctggttcgc caagcgcgga
     5401 acctggatcg tgctcgccag ccgtttcatg ccgggcactc ggctgccgac ctacgtcgcc
     5461 gccgggatgc tgcacacccg gctggccgcg ttcctggtgg cgttcgtggt ggcgtcggcc
     5521 ctctgggtac cggccctggt gggcggagcg gcggtgttcg gcggccagct gctggactgg
     5581 ttctcggggt atggccggct ggccggggcc gcgttcctgg ccggactggt gctgctttat
     5641 ctcgtcgtca agagcgccac tcacctggcc acctggcgcg ggcggcgcct gctgctgtcc
     5701 tcctggcgtc gcctcacccg ttgggaattc tggcccctct gggccttcta tccgccggtc
     5761 gtgctctaca tcgcgtggct ctgcctcaag catcgctcgc cgacgttgtt cacctgcgcc
     5821 aatccggcca tgccgggcgg tggcctggtc ggcgaatcca aacacgccat cctggaggac
     5881 ctggggccgg ggccggagat cgcgcgcagc atcctcctgc ccgcgaccga cccgctggac
     5941 gatcgcttgc gacaactgga acggtttgtg gctgccgaga agctcacctg gccgctggtg
     6001 ctcaagcccg acgtcggtga gcgcggcctg ggagtcgact tcgcgcgaga cccgagcgag
     6061 gcccgtggtt atctgctcga cgcctcgtac gacgtgatcg ttcaggaacg gctcgacggg
     6121 ccggaattcg gggtgttcta ttttcgcgtg ccgggtgaag cagccgggcg gatcttcgca
     6181 atcacggaaa agcacctgcc cgacgtcgtc ggggatggcc accggaccct ggaacagttg
     6241 atcctgtcgg acgatcgggc ggtatgctcc gctcgctttt tcctgcggca gcatgccgac
     6301 cggctggact gggttccgtt cctgggggag aaagtggcgc tgacccggct cgggacccat
     6361 agccgcggcg cgctgtttct ggatggggct ggtctcatca cccccgcgtt ggaagcggcc
     6421 gtcgaccggc tcagtcgccg caacggggga ttctggtttg gacgttacga tctgcgaacc
     6481 gccagcgcgg aatcgctgat ggccggtgga cccttcaagg tcctggagct gaatggtgtg
     6541 agcagcgaag ccacctcgat ctacgatccc tcgcacagtc tgctccaggc ctatcggacg
     6601 ctgtttgccc agtggaagct ggccttcgag atcggccgac gaaatcgggc caccggagcc
     6661 acgccaaccc cgctcccggc cctgctggcc ctgttccgta agcaccggaa cgcgacccga
     6721 gccgctcgag gaaacccccg ctagcgatcg aggagagagg agatgatcac catcgcgccg
     6781 gtttccctgg agggccaagg tatccggctg gagccgcttc ggcccgagca ccaggaaccc
     6841 ctcgcggccg ccgcggccga cggccgtctc tgggagctcc gagtcacttc ggtgccggag
     6901 ccggaccagg tccagagcta cgtcgccgcg gcccttgccg gtcagatgga gggccgcatg
     6961 ttgccgtggg cggtgcgtga gctgggcggc ggcaccatcg tcgggagcac ccgttatcac
     7021 gacatcgtgg tcgagatcga ccgggtcgag atc
//
LOCUS       DASWKS010000311         2369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_538370, whole genome shotgun sequence.
ACCESSION   DASWKS010000311 DASWKS010000000
VERSION     DASWKS010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538370"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VGA78_08935"
     CDS             <1..410
                     /locus_tag="VGA78_08935"
                     /inference="COORDINATES: protein motif:HMM:NF014886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate kinase alpha/beta domain-containing
                     protein"
                     /protein_id="HEX9894039.1"
                     /translation="SWSVVGLHHHQGDTGSRIEDAIAVGVCAAAELLGAPLIVCLTAS
                     GFTARTVAAYRPEVPILAVTPEPDTFRALALVWGVAPALVDHLPNYDRMWPVARERVL
                     QSGLAQPGDRVVVTAGVPFDQPGTTNLLKVETI"
     gene            567..1346
                     /locus_tag="VGA78_08940"
     CDS             567..1346
                     /locus_tag="VGA78_08940"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9894040.1"
                     /translation="MRLTLLGTGTSFGIPQIGCECSVCRSADPRDRRTRTSALLQTRT
                     GALLIDTPPELRLQLVRQGVREVDAVLYTHEHADHVTGIDDLRMFSLRRRAALPLYGP
                     RQTLDFLQSSFRYIFDENVPIPEGTSRPRLTLHPLTAGVATTVAGINVQPLAFDHGYS
                     DVFGYRIGGLAYVTDVKRVSDEARRRLRGVQVLVLSALWWRPHPTHQSIPEAIEAAET
                     IGAERTYLTHLSHETSHADLAARLPAGIEPGFDGLTVEIDG"
     gene            1343..>2369
                     /locus_tag="VGA78_08945"
     CDS             1343..>2369
                     /locus_tag="VGA78_08945"
                     /inference="COORDINATES: protein motif:HMM:NF012562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894041.1"
                     /translation="MKLAYGRMFQDRLDGRHGLPRALLEELGSRFPAVQDEVQSRRRM
                     GEYGFYDLGDQSTTVQGIRRFAEGVGQAFDHVLVLGIGGSALGTKALVTALRPPAWNE
                     LDDEGREYFPRLTLLENVDPSTIGAALRRIDPRRALVNVVSKSGGTAETLAQYLVVRD
                     WLEAAVGPEAARRHLVFTTDPSKGPLRQIAEREGITALEVPPAVGGRFSVLSPVGLLP
                     AALVGIDIDALLRGARRALHHGGTDQLKQNPAALYAGLLWAADARAGSRIHVLMPYCD
                     RLKESAEWYRQLWAESLGKRVNRRGDEVFLGPTPLGAIGATDQHSQIQLFMEGPYDKV
                     VTFIGVED"
BASE COUNT          373 a          801 c          790 g          405 t
ORIGIN      
        1 cctcctggag cgttgtaggg ctacatcacc accaggggga caccggttcc cgcatcgagg
       61 acgcgatcgc cgtgggggtt tgcgccgccg cggagttgct gggggctccg ctgatcgtct
      121 gcctgacggc cagcgggttc accgcccgca ccgtggcagc ctaccgcccc gaagtcccca
      181 ttctcgccgt gacacccgaa ccggacacct tccgggccct ggcgctggta tggggggtgg
      241 ccccggcgct ggttgatcac ttgcccaact acgatcggat gtggccggtg gcccgggagc
      301 gggtgctgca atcgggactg gcccagccgg gcgatcgcgt ggtcgtgaca gccggcgtgc
      361 ccttcgatca gccgggaacg accaacctcc ttaaagttga gaccatctag actgaacgtt
      421 ccgggttccg ggttccacgt tccacgtgct gtgctgagtg ctgtgcccaa gttccccggt
      481 gcacggctgg cgcacgcagg acctggcacc tggcaccgca cgttgcaccg cacccggaac
      541 ccggaacctg tggaacctgg aacgcaatga gattgaccct cctgggcacc ggcacctcat
      601 tcggcatccc ccagatcggg tgcgagtgct ccgtctgccg gtcggccgac cctcgagacc
      661 ggcggacccg tacctcggcg ctgctccaaa ccaggaccgg cgcgctgctc atcgacaccc
      721 cgccggagct gcgcctccag ctggtgcggc aaggagtcag agaagtggat gcggtgctct
      781 acacccacga gcacgcggat cacgtgaccg gcatcgacga tcttcgcatg ttctcgctgc
      841 ggcgacgagc cgcgctgccg ctctacggtc cccgtcagac gctcgacttc ctgcagtcca
      901 gtttccggta catcttcgac gagaacgttc cgattccgga aggaacttcc cggccccggc
      961 tcacactcca tccgctgacg gcgggtgtgg ccacgacggt cgcgggcatc aatgtgcagc
     1021 ccctggcgtt cgaccacggc tattccgacg tcttcggata ccggatcggg gggctcgctt
     1081 atgtcaccga cgtgaagcgg gtttcggacg aggcccggcg gcggctgcgc ggcgttcagg
     1141 tgctggtgct gagtgcgctc tggtggcggc ctcaccccac ccatcagagc attccggagg
     1201 cgatcgaagc cgcggagacc atcggtgccg agcgaaccta cctcacccat ctttcgcacg
     1261 agacctccca cgccgacctg gccgcgcgtc tgccggccgg gatcgagccg ggattcgacg
     1321 gcctgacggt ggagatcgac ggatgaagct cgcctacggc aggatgttcc aggaccggct
     1381 cgacggccgt catggcctgc cccgcgccct gctggaggaa ttgggtagcc gctttccggc
     1441 ggtgcaggat gaggtgcaaa gccgtcgccg gatgggcgaa tacggcttct acgacctggg
     1501 tgatcagagc acgaccgtgc aaggcatcag gcggttcgcc gaaggcgtgg gacaggcctt
     1561 cgatcacgtg ctggtactgg ggatcggcgg atcggccctc ggcaccaagg ccctggttac
     1621 cgcgctccgg ccgccggcct ggaacgagct cgatgacgag ggccgcgaat acttcccccg
     1681 tctgacgctc ctggagaacg tggatccctc caccatcggg gcggcactcc ggcggatcga
     1741 tcctcgccgc gccctggtga acgtggtcag caagtcgggt ggcaccgccg agactctggc
     1801 gcagtatctg gtggtacgcg actggctcga ggccgcggtg ggtccggaag cggcccgccg
     1861 acatctggtg ttcaccaccg atccgtccaa gggcccgttg cgccagatcg ccgaacggga
     1921 gggcatcacc gccctggagg tccctccggc ggtgggaggc cgtttcagtg tcctctcgcc
     1981 ggtgggtttg ctgcccgcag ccctggtggg aatcgacatc gatgctctcc tccgaggtgc
     2041 ccggcgggcc ctgcaccatg gcggaaccga tcagttgaag cagaacccgg ccgcgctcta
     2101 tgccggcctc ctctgggccg cggacgcgcg ggccgggtcc cgcattcatg tgctgatgcc
     2161 ctattgcgat cgactcaagg aatccgcgga atggtatcgt cagctctggg ccgagagcct
     2221 gggtaagcgg gtcaatcgcc gcggcgacga ggtgtttctc ggtccgacgc cgttgggggc
     2281 gatcggcgcc accgaccagc acagccagat ccagctgttc atggaaggcc cctacgacaa
     2341 ggtggtcacc ttcatcggag tggaagact
//
LOCUS       DASWKS010000312         3990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3472351, whole genome shotgun sequence.
ACCESSION   DASWKS010000312 DASWKS010000000
VERSION     DASWKS010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3472351"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VGA78_08950"
     CDS             <1..690
                     /locus_tag="VGA78_08950"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HEX9894042.1"
                     /translation="EAALRLRQTLPYWPRGTVFVSVVDPGVGTERRPVVVRTRSGHYV
                     VTPDNGTLTFLADAVGLEAVRVIDVARHAKGGSQRSHTFQGRDLFVVVGAGLAAGVLT
                     LNEVGPAVDNTVERLPLPPLRRSPGALTGGVIGIDRPFGNVWTNLPGAELDSAGLALG
                     DTLRVSVRRGARVLFQGDLPYVGTFGDVSSGRPLLYLNSLLEAALALNRADFAGRYGI
                     EPGDLVELKRR"
     gene            690..2759
                     /locus_tag="VGA78_08955"
     CDS             690..2759
                     /locus_tag="VGA78_08955"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX9894043.1"
                     /translation="MPQVETFLRDLTIVLTVAAVTTVLCQRLRLPVVVGYILAGVVTG
                     PSTPLHLVADTTWIRTLSELGVILLMYSIGLEFSLRRLGRLLPITGPAAAIETGLMVA
                     LGYLGGQVAGWTPLESLFTGAVVAISSTMIVAKAFEDSVPSRRLQDLVFGVLIIEDLV
                     AILLLVGLTAVGTGRGLDGGSVIETVGQLIGFLAVLLAGGMLVVPRAMRAVVALKREE
                     TTLVAAVGVAFLFALLAQAAGYSVALGAFLAGALVRESGVAHKVIGPIRPVRDIFAAI
                     FFVAVGMLVEPALVFQAWPVVLALTVTVLVGKLIGVTLGGFLAGFGLRTAVQAGMTLA
                     QIGEFSFVIAAAGLASGAAPPVLYPAAVSVSVLTALLTPTLMRLADPLSAVIDRKLPK
                     PIQTVVTLYESWVELLRRRTKPRGIWQQIRRPLNWMLLDAIVIVGVTVLVSRLRVPLR
                     DQLLLVGVPLRYGMAVLFLLGLAMVLPFAIGLVTSARRFAIRFAEAAMPRAAKGIDSA
                     HAPRGALVASIQFATVMVLGLPLLAITQPLLSAWPAAAVMVGLLLLLTISFWRSARDL
                     QGHARAGAELIVDVLARQGIDKDQHSIEVVQDLLPGMGTIVPFRVDLGSKAVDRSLGE
                     LNLRGLTGASVVALSRGGQRIVFPKAHEVLREGDVLALTGSHDAISAAHQVLGKSTVE
                     AQVGWVG"
     gene            complement(2935..3573)
                     /locus_tag="VGA78_08960"
     CDS             complement(2935..3573)
                     /locus_tag="VGA78_08960"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEX9894044.1"
                     /translation="MASIPTLDSLDLNAVVRHLRAVDPRLAELIRRAGPFRPDWRMNI
                     SPYQGLFRSIVYQQLSGKAAGTIFRRVLALYGDGAVPEPAQVLATSDDRLRGAGLSRN
                     KTAAIRDLAARTLDGTVPDRATARRTPDQELIDRLVAVRGVGRWTAEMLLMFGLGRPD
                     VLPVSDLGIRKGFQLTYGMKRLPAAGTIMRQGKAWAPYRTVASWYLWRAVEL"
     gene            3656..>3990
                     /locus_tag="VGA78_08965"
     CDS             3656..>3990
                     /locus_tag="VGA78_08965"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9894045.1"
                     /translation="MDLALTLAGGGNRAFWQVGILERWWDRLVPRLGAIAACSAGAST
                     AVTWLSGRHPETHRYWLGRRTAVTRNFHWRGLLPGRRLTPHEPIYRDTLLHALEEGGL
                     DRIRALPFPL"
BASE COUNT          529 a         1320 c         1430 g          711 t
ORIGIN      
        1 gaggcggccc tgcgactccg ccagacgctc ccttactggc cccgcggcac cgtcttcgtc
       61 tcggtggtgg acccgggggt gggaaccgag cggcggccgg tggtggtccg gacccggagc
      121 ggccactacg tggttacccc ggacaacggt accctgacat ttctggccga cgcggtagga
      181 ctggaagcgg tgcgggtcat cgacgtggcc cgccacgcca aagggggctc ccagcgatcc
      241 cacacctttc aagggcggga cctgttcgtg gtggtgggcg ccggcctggc ggccggggtg
      301 ctgaccctca acgaggtcgg gccggcggtg gataacacgg tcgagcgact tcctctgccg
      361 ccgctgcgcc gttcgccggg cgcgctgacc ggcggggtca tcgggatcga tcggccgttc
      421 ggcaacgtct ggaccaatct cccgggcgcc gagctcgaca gtgccggtct ggccctgggt
      481 gacacgctgc gggtctcggt gcggcgcggg gcgcgggtgc tgttccaggg tgatctgccg
      541 tatgtcggga ccttcgggga cgtctcgtcc ggccggcccc tgctctacct caacagcctg
      601 ctcgaagcgg cgctggcctt gaaccgggcc gatttcgccg ggcgctacgg catcgaaccg
      661 ggtgacctgg tggagctcaa gcggcgctga tgcctcaggt cgaaaccttc cttcgcgacc
      721 tgaccattgt cctcaccgtc gcggcggtga cgacggtgct gtgccagcgg ctgcgactgc
      781 cggtagtggt gggctacatc ctcgcggggg tagtcaccgg tcccagcacc cccctccacc
      841 tggtggctga taccacctgg atccggaccc tctccgagct gggcgtcatc ctgctgatgt
      901 actcgatcgg gctggagttc agtctccgcc gcctgggacg gctgctgccc atcaccggtc
      961 ccgcggccgc cattgaaacc gggttgatgg tggcgctggg atacctgggc ggccaggtgg
     1021 caggctggac tcccctggaa agcctgttta cgggtgcggt cgtcgccatt tcatcgacca
     1081 tgatcgtggc caaggccttc gaagacagcg tcccgtcgcg gcggctgcag gatctggtct
     1141 tcggcgtgct gatcatcgag gacctggtgg ccattctcct cctggtcggt ctcaccgcgg
     1201 tggggaccgg ccggggcctg gatggcggta gcgtgatcga aaccgtgggc cagctgatcg
     1261 ggttcctcgc cgtgctgctg gcggggggga tgctggtggt gccacgggcc atgcgcgcgg
     1321 tcgtggctct caagcgggag gagaccacgc tggtggcggc ggtcggggtc gccttcctgt
     1381 ttgcgctgct ggcccaggcc gccggctatt ccgtggcgct gggggctttt ctggccggcg
     1441 cgctggtccg ggagtcgggg gtcgcccaca aggtcatcgg accgatccgc ccggtgcggg
     1501 acattttcgc cgcgatcttc ttcgtggccg tagggatgct agtcgagccc gccctggtgt
     1561 tccaggcctg gccggtggtg ctggctctga ccgtcacggt gctggttggc aagctgatcg
     1621 gggtgacgtt aggcgggttc ctggcgggat tcgggctccg gaccgcggtg caggccggga
     1681 tgaccctggc ccagatcggg gagttttcgt tcgtcattgc ggcggcgggc ctggcgtcgg
     1741 gggcggcgcc cccggtgctg tatccggcgg cggtctcggt ctcggtcctc acggccctcc
     1801 tgacccctac cctgatgcgc ctggccgatc cgctctccgc cgtgatcgac cgcaagctgc
     1861 ccaagccgat ccagaccgtg gtgacgttgt acgagtcgtg ggtggagttg ctgcgccgcc
     1921 ggaccaagcc gcgcggcatc tggcagcaga tccgacgccc gctcaactgg atgctgctgg
     1981 acgcgatcgt gatcgtgggc gttacggtgc tggtctcgcg gctacgggtc ccgctccggg
     2041 accagctcct gctggtgggc gtgccgctcc gctacggcat ggcggtgttg tttctgctgg
     2101 gtctggccat ggtgctgccc ttcgcgatcg ggctggtgac ctcggcccgc cgctttgcca
     2161 tccgcttcgc ggaagccgcc atgcccaggg cggccaaggg aatcgactcg gcccacgcgc
     2221 cccggggggc cctggtggcc tccatccagt tcgccaccgt gatggtgctg ggactaccct
     2281 tgctggcgat cacccagccg ctgctgagcg cctggcccgc ggctgcggtg atggtggggc
     2341 tgttgttgtt gctgaccatc tcgttctggc gctcggcccg cgacctgcag ggacatgccc
     2401 gggccggcgc cgagctgatc gtggatgtgc tggcgcgcca ggggatcgac aaggaccagc
     2461 attccatcga agtcgtgcag gacctgctgc ccggcatggg gaccatcgtg ccgttccggg
     2521 tggacttggg aagcaaggcg gtggaccgct ccctgggcga gctcaacctg cgtggcctca
     2581 ccggcgccag cgtggtggcg ctcagccgag gcgggcagcg gattgtcttc ccgaaagccc
     2641 acgaggtcct gcgcgaggga gatgtgctgg cgctcaccgg aagtcatgat gccatcagcg
     2701 ccgcgcatca ggtcctgggg aaatccacgg tggaggcgca ggtggggtgg gtcgggtagg
     2761 ggcgttcggt tgtggcccgc cactaccacg cgttccgcgg accaggttcc acgttccgcg
     2821 tggcggtgcc cggtgcggtt ctcagtgccg gcgtgccaga cacccagcac cccgcacccg
     2881 gcaccgcacg cagcaccgca acctggaaca tggaacccgg aacccggaac cggcttacag
     2941 ttcaaccgcc ctccataagt accaactcgc caccgtccga tacggcgccc atgcttttcc
     3001 ctgccgcatg atggtgcccg cggcgggcag gcgcttcatt ccgtaggtca gctggaagcc
     3061 ctttcgaatc ccgaggtcgc ttaccgggag cacgtcggga cggcccaggc cgaacatcag
     3121 gagcatttcc gcggtccagc gtccgacgcc gcggacggcc accagccggt cgatcagctc
     3181 ctggtcggga gtacggcgcg cggtggcccg atccggcacg gtcccatcga gcgttcgcgc
     3241 ggcgaggtcg cggatggccg cggtcttgtt gcgggagagg cccgcgccac ggagccggtc
     3301 gtctgaggtc gcgaggacct gcgccggttc cgggacggct ccgtcaccgt agagcgccag
     3361 cacccggcgg aagatggtgc cggccgcctt gcccgagagc tgctgataga cgatcgaccg
     3421 gaacaacccc tggtagggcg agatgttcat ccgccagtcg ggacggaagg ggccggcccg
     3481 ccggatcagc tccgccaggc gggggtccac agcgcgcagg tgtctcacca ccgcgttcaa
     3541 atcgagggag tcgagcgttg ggatcgaggc cattgacgat tgacagttga cgattgacga
     3601 ttacatcgca gtgatgtgcc cggatcaatc gtcaccggtc aagcgacatt cgtcaatgga
     3661 cctggccctc acgctggccg ggggcggcaa tcgcgccttc tggcaggtcg ggatcctgga
     3721 gcgctggtgg gaccggttgg tcccaagatt gggtgcgatc gcggcctgca gcgccggtgc
     3781 cagtaccgcg gtcacctggt tgtccggccg ccatcctgag acccaccggt actggctcgg
     3841 ccggcgcacc gcggtgaccc ggaacttcca ttggcgcggc ctgctgccag gccggcggct
     3901 cacaccccac gagccgatct atcgcgacac cctgctccac gcgctggaag agggcgggct
     3961 ggatcggatt cgcgcactcc cgtttccact
//
LOCUS       DASWKS010000313        13950 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1654256, whole genome shotgun sequence.
ACCESSION   DASWKS010000313 DASWKS010000000
VERSION     DASWKS010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13950
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1654256"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1327
                     /locus_tag="VGA78_08970"
     CDS             <1..1327
                     /locus_tag="VGA78_08970"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894046.1"
                     /translation="GMEDLAHGFFNRGSTRINRAVELDPAFGLARVINGVFAPGLTAA
                     QREADITRGVADAAKASTGELLVAMAYRENFRQNALGARSLLMAAGSVLPAEPYVMWQ
                     RAVWAANVPGGTQTDAIPELRRLIERFPEYAPAYNTLAYAQWRAGNQAEAIRTAATFM
                     QKASGQPKAHDTYAELLQWDGRYDDAVKHYTAAIEADKTFLAGFFGLAEVQMLQGKGD
                     LARTTLTASLPNSTVPAQRVAAHNRIANSYVLDGNTKAALTAFVAALGEAQKANLTGQ
                     VVGAHVAMMNLEAALGDSKNVPAHVEHLRAIPPPPVVTPQQRAGVYLGTGTAFAMAGQ
                     TAPARMQLDSLTQHAKTNSGPQVTAQLHQLTGWVLYSEGKFAEALAEFRQGNPQNASV
                     RSGIALSQFKLGNVVEARSIRDELVNDRNLNMANSGNVLARRLVKQRIT"
     gene            complement(1460..1957)
                     /locus_tag="VGA78_08975"
     CDS             complement(1460..1957)
                     /locus_tag="VGA78_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894047.1"
                     /translation="MALITGLLAFAILFIQHDLPVGTVEHDREPSFHIRLIPLDTLSD
                     LAIAYADSTQPVIYYSPRLMQRYGPDISAFVVAHEQSHILLGHRRPSAVTSPHAVELL
                     LQRWELEADCLAASRLARERPAALVAARDYFQHMGAERVDCEHPTGTARAARIEECGT
                     GRVGN"
     gene            complement(2023..3801)
                     /locus_tag="VGA78_08980"
     CDS             complement(2023..3801)
                     /locus_tag="VGA78_08980"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9894048.1"
                     /translation="MKQSRTAMTRRSLFTFALVLAGAAPLAGQTRSAEGLDLELGVKV
                     PLRDGVKLNATLYLPQGPRVPRPVVLAMTPYMSDRYHAYAVPIAKRGYVVAVVDVRGR
                     GSSEGTFDPFAQEAKDGYDTVEWMARQPWSSGKVGMIGGSYGGFNQWSIVKEFPPHLV
                     TITPTAAAHLGIDFPSFGGIGAKYQMAWISFTSGRYAGGNLFGDAGYWNTKYRASYLA
                     HLPFAKLDSVVGNPSAAFQRWLAHPAYDEYWASMAPSPEQLARLGLPIFTRTGMYDGD
                     QIGAMEHYRNHMKHGSASAKAKHYLMIGPWDHAGTRVPQRSFGGLTFGEKSVVEMEQL
                     EADWFDWTMGNGPQPKQLPKRVAYYVSGAEEWKYADSLEELGRNPTRYFLSSGGNTAQ
                     SVFQSGGLTPTEPPASAPDEWTYDPLDTKPGQDEPAEPDYTDQYYALTVGGRGAIYHS
                     APFDRDTEITGFPSLTLWLTLDVPDSDLLVWLYEITRDGKSILLDDTGLRLRYREGRA
                     KPVLLTPGQPTQVEFDEFRFMSRRIAAGSRIRLLIQSPNSIHLEKNYNSGGDVSRESA
                     KNARTAHLKLHHEPGRWSTLALPIVP"
     gene            complement(3867..6506)
                     /locus_tag="VGA78_08985"
     CDS             complement(3867..6506)
                     /locus_tag="VGA78_08985"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9894049.1"
                     /translation="MFLPLLRRILRRPLPGTDQRSAPADVDAELEFHLQMRVQELMAQ
                     GCSESEARAEALRRFGDFTEARSTLVRQGESRALRHRWVVWLEDLGQDLRLALRGIRH
                     RPGLAVTATVTLALGLGLTTTVLAVVNRLVLHPLPYPGAERFAMVWLADDRTAMQISP
                     TLRMLGAWRARSAGLEWIEAHNQEELLLESGETAELVPTRSVTPGLLPALGARVVLGR
                     GIEPSDTTAGAPPVALLSWGAWQRRFGGVRDAIGSPVRLDGKIATVVGVVERGFDLTP
                     MDGGARAEFWLPLGGPGKDEESAAILLRRRPGITPASVTGELRAALAAEGITSDLLEK
                     FKPTSSDPGEFADEDRERGLWLLTLAVGLVLGVACANVAALLLGQSAVRAREFGVRAA
                     LGAGRGRVMRQLITEATFLGGLGGAAGLAVAHAALWLTRVTRPENLLTLDDVAIDPQV
                     MFLALGLTLLVAILFGLAPAWAASRTDAATAMVGRIQRSMDNRFSRSLRSVLVIGQLA
                     ASLALVSGAGLLLKSFVAQRNLPVGLDPVGLGWVDIDISSRVVPVSAERAAITEQALA
                     AVAAMPGVEAATLAGDSPLGYGVMNAEFLIDGRPLPGQPTSVLIPTRSIGPGYFETIG
                     SHLVRGRSPDSRPGSTEIVIDAVTARQFFPGGDAIGSRIRFSREAPWRTIVGVAPEQR
                     TLLGAFQTGPFVFVPLDSGERNGVVILRARGSLSLERVSAVIRGVDSRIRIRSVQTAE
                     AALAERLAGRRFTMTIVMGFAGLALLLAAVGLYGVVALAVTQRAYEIGVRMALGAHPA
                     KVRLLVLREGAIRVIIGLALGLLLVAGSGRLLRGLLSGASTWDPAVWAGSAAVLAVAG
                     ILACWVPARRASRIDPMIALRAE"
     gene            complement(6509..6850)
                     /locus_tag="VGA78_08990"
     CDS             complement(6509..6850)
                     /locus_tag="VGA78_08990"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9894050.1"
                     /translation="MSRKEPNDLLHGTLDVLILKALTLGPAHGYAVSRWIEDRTGGLL
                     AVEDAALYKALHRLEAQDAIEADWGVSETNRKAKYYQLTAKGRRLLRAEARVWQQYAS
                     AVSAVLRASER"
     gene            complement(7021..9627)
                     /locus_tag="VGA78_08995"
     CDS             complement(7021..9627)
                     /locus_tag="VGA78_08995"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEX9894051.1"
                     /translation="MKSHHLLLLLGGLGACRPGSARDPDYGVALDLARERAGRISDLR
                     YTLRFNLPAERTAPVTGLVTIRLALADASRPLVLDFRGDSSRVAGVEVNGATVTPALP
                     AGHVVIPADALTQGPNTVSLRFTANNEALNRNDGFLYTLFVPDRASTAFPVFDQPDLK
                     ARWTLQLQVPAGWAAVANGALRARDSTNAGVVVAFDETAPISTYLVAFAAGKFQVEEA
                     VRDGRALTMLHRETDGAKVARNRDAIFDLHAAALRWLENYTGIPYPFGKFAFLAVPSF
                     QFGGMEHPGAIWYRASSLFLDPSATRNQVLGRASLIAHETAHMWFGDLVTMRWFSDVW
                     MKEVFANFMAAKIVEPSFPDVNHDLRFLLAHHPAAYGVDRTLGANPIRQELANLREAG
                     SLYGAIIYQKAPIVMRQLERLVGDTTFRNGLREYLGRYRFGNAGWPELIEILDGRTPE
                     DLAGWSRAWVAEPFRPQVEATWSPESLTIMQRDPQPDRGLRWIQPVEVALGYPDTVLR
                     ITARMAGDQVTLPLPRPGRPGWILPGSDGLSYGRFRLDSASRQALPAAGARLSDPVLR
                     AAGWTSLWESLLAGETPPRGFLARTLEALETEPDELVTQYLLGLAGTTFWRFLPDSVR
                     QAQAATLEAALWRGLDRAAGPSRKGAWWSTLVAVTLTPEGLARLQRIWRRREPPAGLP
                     LAELQYTALAEALALREVPDVEAMLDREQARITNPDRLARFRFVRPALSGDPAVRDSA
                     FESFRSVENRRRESWVLDAMNYLGHPLRARQAERYLEPGLGLLEEIQRTGDIFFPLGW
                     LNSLLDGHQSAAAAAKVDAFLAARPDLAPRLRGKLLQSADDLFRAARIVEGWTGGPAL
                     EGESSSGPPSRP"
     gene            complement(9761..12493)
                     /locus_tag="VGA78_09000"
     CDS             complement(9761..12493)
                     /locus_tag="VGA78_09000"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894052.1"
                     /translation="MTGRQTSGPATIRSRKSVPIPRPRSRRRRRTPIDRPSSLRGTAE
                     RLATALADRYQVERELGQGGMATVYLAQDLRHHRKVALKVLRPELAAVIGAERFLHEI
                     TTTANLQHPHILGLHDSGQVDGTVFYVMPFVEGESLRDRLTREKQLPVDDAVRIAREV
                     AGALDYAHRHGVIHRDIKPENILLHDGSALVADFGIALAASRTGGSRMTETGMSLGTP
                     HYMSPEQAMGERTLDARTDIYALGCVLYEMLSGEPPFTGPTAQAIVARVVTEEPRPLT
                     LQRKTIPLHVEAATLAALAKLPADRFATAAEFADALTEGARATRQRVVPSTAQPSVHP
                     SVRQSVLITGLALTAILAAWGWLRPGVKPEVARFAVEFGDAYTDSDGEPAISPDGRSF
                     IYSSADGALTLRRQGGLETTRIPGSANGWSPFFSPDGSTLGFMTGFPGDLKLVTLASG
                     AVTTIVRDSVISYGGSWSDDGWIYYTAGLGRTLMRIRPSGESAELVLRAESTRDEFAL
                     RAPFVLPGGRQLLLTIWRQRGPPDIALLELGSASPRVVTQGLKAWYLPSGHLIIARGN
                     GSVAAVRFTPKSGDVKGQAVELIDGVKTNSGGIPFFAISASGTVLYSATQRTSRLVRV
                     QPTGQVSLVDPSWIGELGWPSLSPDGSRLAVSNLVGGRREVWVKALDTGPFFRVAAAG
                     SQNYRPFWSRDGRSVGFVSDLGGLSGLYQTAADGTGGVEPIAPSSRSIDEGTWSGDGR
                     WLIFRAGSGNARDILGLRPGVDSTPIPLVATDAEEFSPSVSPDGRWLAYASDVSGQDE
                     IFVRPFPDVSTGRLQVSVAGGTEPVWSSTGRELFYRSLDYGLVAATLEPGPPLRVQSR
                     RVLFSTRGYHSDTRHVAYAVSLEGAFYFFQQADVPTAQMVLIQNWITELEAKVP"
     gene            complement(12390..13586)
                     /locus_tag="VGA78_09005"
     CDS             complement(12390..13586)
                     /locus_tag="VGA78_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894053.1"
                     /translation="MPAMSRSSRLARSLLTAVGGIACLALVAFTAMSDRNGAPRTETS
                     DDQILRGRALVVGHACSGCHGGVFDPANAGYLAGMQSPAGEFTFEGFKLRPPNLTPDN
                     ETGLGRFSERQIFNALRFGLRPRDTPDVEITSTTPGQGNFPATPKYLGPDMPWPAWRH
                     MSDQELRDIAAYLKRAVRPVSNKVADSEGPPDFWASGYAKLNGSYPAAPFPTANEVST
                     AAPDEAVQRGRLLAIHHACGGCHGGGNDNPGTEGWLAGARTPADTFMIGPFITRARNL
                     TPDNVTGLGRFSERQIFNALRYGLRPGETPDVEITSTIPGQGNFPLSPKYLAPPMPWP
                     AWRHLTDQELRDIAAYLKRGLKPVRNKVVDSDGPPDFWASDYTVEKIGPYPATPFPTP
                     KENPDR"
     gene            complement(13602..>13950)
                     /locus_tag="VGA78_09010"
     CDS             complement(13602..>13950)
                     /locus_tag="VGA78_09010"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX9894054.1"
                     /translation="TARRLMVLTQGFINGRPMDLDRVDVSASLGATEIWEIENLVGMD
                     HPFHLHGFQFQVLDRNGVPEPFRQWKDVVNVPKHESARFIVRYDDYPGKWMFHCHILQ
                     HEDHGMMGVLEIK"
BASE COUNT         2349 a         4622 c         4789 g         2190 t
ORIGIN      
        1 cgggatggaa gatctggccc acgggttctt caaccgcggc agcacccgga tcaaccgggc
       61 ggtcgaactc gaccccgcct tcgggctggc gcgggtcatc aacggcgtgt tcgctcccgg
      121 cctgaccgct gcccagcgtg aagccgacat cacgcggggc gtcgccgacg cggcgaaggc
      181 ctcaaccggt gagttgctgg tggccatggc gtatcgggag aacttccgcc agaacgccct
      241 gggcgcgcgc tcgttgctga tggcggccgg cagtgtgttg ccggcggaac cctacgtcat
      301 gtggcagcgc gccgtgtggg ccgccaatgt tcccggcggg acccagaccg atgcgatccc
      361 ggagctcagg cgactgatcg agcggttccc cgagtacgcg ccggcctata acacgctcgc
      421 ctacgctcag tggcgggcag ggaaccaggc cgaggcgatc cggaccgccg ccaccttcat
      481 gcagaaggcc tcggggcaac ccaaggcgca cgatacctac gccgagctgc tgcagtggga
      541 cggccggtac gacgatgcgg tgaagcatta caccgcggcc atcgaggcgg acaaaacgtt
      601 cctggcgggg ttcttcgggc tggccgaggt gcagatgctg caggggaagg gcgacctggc
      661 gcggaccacc ttgaccgcgt cgctgccgaa ctcgacggtg ccggctcagc gggtcgcggc
      721 tcacaaccgg atcgccaaca gctacgtgct ggacggcaac accaaggcgg cgctgacggc
      781 gtttgtcgcg gcgttgggtg aggcgcaaaa ggcgaacctc acgggccagg tggttggcgc
      841 tcacgtcgcg atgatgaacc tcgaagcggc attgggcgac tccaagaatg tcccggctca
      901 cgtggagcac ctccgcgcca ttccaccacc gcctgtggtg acaccgcagc aacgggccgg
      961 ggtgtatctg ggaacgggca cggccttcgc gatggctggt cagaccgccc cggccaggat
     1021 gcagctggac tcattgaccc agcacgcgaa aaccaactcc ggcccacagg tcacggccca
     1081 gctccaccag ctcaccggat gggtgctgta cagcgaaggc aagtttgccg aagcgctggc
     1141 ggagtttcgg cagggcaatc cacagaacgc ctcggtgcgg agcgggatcg cgctgagtca
     1201 gttcaagctg gggaatgtgg tggaggcgcg ttcgatcagg gacgagctgg tcaacgaccg
     1261 gaacctgaac atggccaact cggggaacgt gttggcgcgg cggctggtga aacagcggat
     1321 tacctgactg aaggcagagt gcagaattgc agaattcata cttcagaagg gcagccatgc
     1381 gccgatcccc cggaggcgaa ggggatggct cgtgttacgc cccttctgaa gtctgcactc
     1441 tgcactctgc attctgcatt cagttcccca ctcggccagt cccgcattcc tcaattcgag
     1501 cggcgcgtgc cgttccggtc gggtgctcgc agtccacccg ttcggcgccc atatgctgga
     1561 agtaatcgcg ggcggcgacc aaggcggccg gcctttcgcg cgccagacgg gaggcggcca
     1621 ggcagtcggc ctccagctcc cagcgctgga gcaggagctc gaccgcgtgc ggcgaggtca
     1681 cagccgaagg gcgtcgatgg ccgaggagaa tgtgggactg ctcgtgggcc acgacgaacg
     1741 cggagatgtc gggcccatag cgttgcatca gcctggggct gtaatagatg accggttggg
     1801 tggagtcggc ataggcgatt gcgagatccg acaacgtgtc cagcggtatt aagcgaatat
     1861 gaaatgacgg ttcccggtca tgctcgacgg tgccgacagg caagtcgtgc tggataaaca
     1921 ggatagcaaa ggccaacaac ccggtgatca gcgccatgtc ccatgactgg gcaagacacg
     1981 taccaccggc ctaggcgaga atcgtcaggg tgccagccct cctcagggca cgatcggcag
     2041 ggccagcgta ctccagcgtc ccggctcatg gtgcagcttg aggtgcgccg tgcgggcgtt
     2101 cttcgcggat tcgcgcgaga catctccgcc cgagttgtag ttcttctcca ggtgaatcga
     2161 gttgggtgac tggatcagca gccggatccg gcttccggcg gcgatccgtc ggctcatgaa
     2221 gcgaaactcg tcgaattcta cctgcgtggg ctggcccggc gtgagaagca ccggcttggc
     2281 gcgtccctcc cgataccgga gccggagtcc ggtgtcgtcc agcagaatgc tcttcccgtc
     2341 tcgcgtgatc tcatagagcc acaccagcag gtcgctgtcg ggcacatcca gcgtgagcca
     2401 gagcgtcaga ctggggaacc cggtgatctc ggtgtcgcgg tcgaacggcg ccgaatggta
     2461 gatcgctccc cgcccgccca ccgtcagggc atagtactgg tcggtatagt ccggctcggc
     2521 aggctcatcc tggccgggtt tggtgtcgag cgggtcgtag gtccactcat ccggggccga
     2581 cgccggcggc tcggtcgggg tcagaccgcc gctctggaag acgctctgcg ctgtgttccc
     2641 gccggaactg aggaagtagc gggtcggatt ccgccccagc tcctccaggc tgtcggcata
     2701 cttccactct tcggcgccgc tgacgtagta cgccacccgc ttgggaagct gcttgggctg
     2761 cgggccgttc cccatggtcc agtcgaacca gtcagcctcg agctgctcca tctccaccac
     2821 gctcttctcc ccgaaggtga gcccgccgaa gctccgttgc ggcacccggg tgccggcgtg
     2881 gtcccacggc ccgatcatca ggtagtgttt cgccttggcc gaggcgctgc cgtgcttcat
     2941 gtgattgcgg tagtgctcca tggccccgat ctggtcgccg tcgtacatcc cggtgcgggt
     3001 gaagatgggg agacccaggc gcgccagctg ctcgggcgaa ggcgccatcg aggcccagta
     3061 ctcgtcataa gccgggtgcg ccagccagcg ctggaacgcc gcggatggat ttcccacgac
     3121 cgagtcgagt ttggcgaacg gcagatgcgc caggtagctg gcgcggtact tggtgttcca
     3181 gtagccggca tcgccgaaga gattgccgcc ggcgtaccgg ccggacgtaa agctgatcca
     3241 cgccatctgg tacttggcgc cgatgccgcc gaaggagggg aagtcgatcc ccaggtgggc
     3301 ggcggctgtg ggcgtaatcg tgaccaggtg gggcggaaac tccttcacga tgctccattg
     3361 gttgaagccg ccgtaggatc cgccgatcat gccgaccttt ccgctgctcc agggctggcg
     3421 cgccatccac tcgacggtgt cgtagccgtc ctttgcctcc tgagcgaacg gatcgaaggt
     3481 cccctccgag ctgccccggc cccggacgtc cacgaccgcc accacgtagc cccgtttggc
     3541 gatgggcacg gcgtaggcgt ggtaccggtc ggacatatag ggtgtcatgg cgaggaccac
     3601 agggcggggg actcgcggtc cctgcgggag gtagagcgtg gcgttgagct tgaccccgtc
     3661 gcggagtggg accttgaccc cgagctcgag atccaggcct tcggcggagc gagtctgccc
     3721 ggcgagcggt gccgcgccgg cgagaaccaa cgcaaaggtg aaaaggctgc gccgggtcat
     3781 ggcggtcctc gactgcttca tgtttggaag gagatgggag cggaccgctc aagcttacgg
     3841 cttggagcag gagaggacaa cagccttcat tccgccctaa gggcgatcat cgggtcgatc
     3901 cggctggccc gccgcgcggg cacccagcag gcgaggatgc ccgccaccgc cagcaccgcc
     3961 gcggagccgg cccataccgc gggatcccag gtgctcgctc cgctcaggag tccccggagc
     4021 aggcggccgg acccggcgac cagcagcagc cccagggcca gcccgatgat cacccggatc
     4081 gcgccttcgc gcaggaccag cagccggact ttggccgggt gtgcgcccag cgccatccgt
     4141 accccgatct cgtaggcccg ctgggtcacg gccagcgcca ccacgccgta gagtcccacc
     4201 gccgccagca gcagcgcgag cccggcgaat cccatcacga tggtcatggt gaagcgccgt
     4261 cccgccagcc gttccgccag cgccgcctcg gcggtctgca cgctccggat ccggatccgc
     4321 gaatccacgc cgcgaatgac cgcgctcact cgctcgagcg aaaggctccc acgggcgcgg
     4381 aggatcacca cgccgttccg ttctccagaa tcgagcggca cgaagacgaa gggcccggtc
     4441 tgaaacgcgc ctaacaaagt tcgctgctcc ggcgccactc cgacgatggt gcgccagggt
     4501 gcctctcggg agaagcggat ccggctcccg atggcgtctc cccccggaaa gaactgccgg
     4561 gcggtcaccg cgtcgatgac gatctcggtt gagccgggtc tcgagtcggg ggaccgtccc
     4621 ctcaccaggt ggctcccgat agtctcgaag tagcccggtc caatcgagcg ggtcgggatc
     4681 agcacgctgg tcggctggcc cggcagcggc cgcccgtcga tcaggaactc ggcattcatc
     4741 acgccatagc ccaggggcga atcgcccgcg agcgtcgcgg cttcgacccc cggcatcgcc
     4801 gcgacggcgg cgagtgcctg ctccgtgatt gccgcgcgct cggcggagac cggtactacc
     4861 cgggacgaaa tgtcgatgtc gacccacccc agccctaccg ggtcgagtcc cacgggaagg
     4921 ttccgttggg ccacaaagct cttgagcagc agacccgcgc cgctcaccag ggccaggctg
     4981 gccgccagct gaccgatcac cagcaccgag cgaagcgagc ggctgaagcg gttatccatc
     5041 gagcgctgga tccgccccac catcgccgtc gcggcgtcgg tgcgggacgc ggcccacgcc
     5101 ggggcgaggc cgaagaggat ggccaccaag agggtaaggc ccagtgccag gaacatcacc
     5161 tgcgggtcga tcgccacgtc gtccagggtg aggaggttct cggggcgggt cacccgggtg
     5221 agccagagtg cggcgtgggc gacggccagg ccggcggcgc cgcctaaccc gcccaggaac
     5281 gtggcctcgg tgatcagctg gcgcatgacc cggccccggc ctgcgcccag cgcggcccgc
     5341 accccgaact cgcgagcccg aaccgccgac tgtcccagca ggagcgccgc gacgttggca
     5401 caggcgacgc ccagtaccag gccgaccgcc agggtgagca gccagaggcc ccgttcccgg
     5461 tcctcgtccg cgaattcgcc cggatcggag gacgtgggct tgaacttctc gagcaggtcg
     5521 gaggtgattc cctccgccgc gagggcggcg cgcagctcgc cggtgaccga ggcaggggta
     5581 atccccgggc ggcgccgcag gagaatcgcg gccgactcct cgtcctttcc cggaccgcct
     5641 aacggcagcc agaactcggc ccgggccccc ccgtccatcg gtgtaaggtc gaaccccctc
     5701 tccaccacac ccaccacggt ggcgatcttc ccgtcgagcc gcaccgggct gccgatcgcg
     5761 tcgcgcacgc cgccgaagcg ccgttgccat gcgccccagg agagcagggc aaccggcggg
     5821 gcgccggccg tagtgtcgga cggttcgatg ccgcgaccca ggacgactct cgcgccgagc
     5881 gccgggagca gacccggcgt cacgctgcgg gtcggtacca actccgccgt ctcaccgctt
     5941 tcgagaagca actcctcctg gttgtgcgcc tcgatccatt ccaacccggc cgaacgggcc
     6001 cgccaggccc ccagcatccg gagggtcgga ctgatctgca tcgcggtccg gtcgtcggcc
     6061 aaccagacca tggcgaaccg ttcagcaccc gggtacggga ggggatggag caccagccgg
     6121 ttgaccacgg cgaggacggt ggtggtgagg ccgagtccca gcgccagggt cacggtggcc
     6181 gtgactgcga gtcccgggcg gtgccgaatg ccgcgcaacg caagtctcaa gtcttgcccc
     6241 aagtcctcga gccacacgac ccagcggtgg cggagcgccc gcgactcccc ctgcctgacg
     6301 agcgtcgatc gcgcttcagt aaaatcaccg aaccgtcgga gcgcctcggc ccgggcctcg
     6361 gactcggagc atccctgcgc catcagctcc tgcacccgca tctggaggtg aaactccagc
     6421 tcggcgtcca catcggcggg agcggagcgc tgatcagtac ccggaagggg ccgccggagg
     6481 atccggcgca ggaggggaag gaacatgact atcgctctga ggcccgcagc acggcggaga
     6541 cggcgctggc gtactgctgc cacaccctgg cctcagcccg aagcaggcgg cggcctttgg
     6601 cggtgagctg gtagtacttg gccttgcggt tggtctcgga gacgccccaa tcagcttcga
     6661 tggcgtcctg tgcctcgagc cggtggagcg ccttgtagag cgccgcgtct tccacggcca
     6721 ggaggccgcc ggtgcggtct tcgatccagc gggagacggc gtagccgtgg gccgggccca
     6781 gggtcagggc cttcaggatc agcacatcga gcgtgccgtg gagcaggtcg ttgggttcct
     6841 tgcggctcat cgtcgcctca ccaggtgagg ggaatatctc accacacctg gtggggcgtc
     6901 aatgactggt cggaaaggta tcgctcaacc ccgcatctag gtgcataggg ttcggaacga
     6961 tgcttcggat acagctgatt cggcggagtc ccccgcggag gcagccgcac cgcgcactgg
     7021 tcacggccgc gaaggcgggc cagatgaact ctctccttcc aaggccggcc cgccggtcca
     7081 gccctccaca atccgcgcag cccggaacag atcgtccgcc gactgtagca gcttccctct
     7141 gagacgcggc gccaggtccg gcctggccgc gaggaacgcg tccaccttcg ccgcggcggc
     7201 ggccgactgg tgtccgtcga gcagactgtt gagccagccg agcgggaaga agatgtcccc
     7261 ggtccgctgg atctcttcca gcagtccgag cccgggctcg agataacgtt cggcttgccg
     7321 ggcgcggagc gggtgaccga gatagttcat cgcgtccaag acccagctct cacggcgccg
     7381 gttctcgacc gaccggaacg actcgaaggc actatcgcgc accgcggggt cacccgagag
     7441 tgccgggcgg acgaagcgga atctcgccag gcggtcgggg ttggtgatcc gggcctgctc
     7501 ccggtcgagc atcgcctcca cgtcagggac ctcgcgcagc gccagcgcct ccgccagcgc
     7561 tgtgtattgt agttcggcca gtggcagacc ggcgggtggc tccctccttc tccagatgcg
     7621 ttggagccga gccagtcctt cgggcgtgag ggtcaccgcc acgagcgtgc tccaccaggc
     7681 tccctttcgg ctcggccccg ccgcccggtc cagcccccgc cacaacgcgg cctcgagcgt
     7741 cgccgcctgg gcctggcgga ccgagtcggg caggaaccgc cagaaggtgg tgccggcaag
     7801 gcctaacagg tattgggtga ccagctcgtc gggctcggtc tcgagggcct cgagcgttct
     7861 cgccagaaag ccccgcggtg gagtttcacc ggccagcagg gattcccaga gtgaagtcca
     7921 accggcggcc cggagcaccg ggtcggacag gcgtgcccca gcagcgggca gcgcctggcg
     7981 gctggcggag tcgagcctga accggccgta gctcaggccg tcggagcccg gcaggatcca
     8041 cccgggccgg ccgggacggg ggagggggag cgtcacctga tcgccggcca ttcgggccgt
     8101 gattcggagc acggtgtcgg ggtagcccag cgcaacctcg accggctgaa tccagcggag
     8161 tccgcgatcg ggttgcgggt ctcgctgcat gatggtgagg ctctccggag accaggtcgc
     8221 ctcgacctgg ggccggaacg gttccgctac ccaggcgcga ctccaaccag cgaggtcctc
     8281 cggggtgcgg ccatcgagga tctcgatcag ttcgggccag cccgcgttgc cgaaccggta
     8341 gcggccaagg tactcgcgca gtccgttccg gaaggtggtg tcgccgacca gccgctcgag
     8401 ctggcgcatc acaatgggag ccttctgata aatgatggcg ccgtacagcg accccgcctc
     8461 gcgcaggttg gccagctcct gccggattgg attggcgccg agggtccggt ccactccgta
     8521 ggccgcgggg tgatgcgcca gcaggaagcg aaggtcgtga ttcacgtcgg ggaaggatgg
     8581 ctccacgatc ttcgcggcca tgaagttggc gaagacctcc ttcatccata catcggagaa
     8641 ccagcgcatg gtcaccaggt cgccgaacca catgtgcgcg gtttcgtggg cgatcagact
     8701 ggcccggccc aggacctggt tccgggtcgc ggagggatcg aggaacagcg aggaggcgcg
     8761 ataccagatg gcgccgggat gctccatccc gccgaactgg aaggacggca ccgccaggaa
     8821 ggcgaacttc ccgaagggat acggaatgcc ggtgtagttc tcgagccaac gaagcgccgc
     8881 ggcgtggagg tcgaagatcg cgtcccggtt ccgggccacc ttcgcgccgt cggtctcccg
     8941 atgcagcatg gtgagggccc ggccgtcacg caccgcctcc tcgacctgga acttccccgc
     9001 cgcgaacgcg acgagatagg tcgagatcgg cgctgtctcg tcgaaggcga ccacgacccc
     9061 ggcgttggtc gagtcgcgag cccggagggc gccgttggcg acagcggccc agccggcggg
     9121 aacctgaagc tggagggtcc agcgggcctt gagatccggc tggtcgaaga cggggaatgc
     9181 ggtggacgcc cgatccggga cgaacagggt atagaggaat ccgtcgttcc ggttgagggc
     9241 ctcgttattc gcggtgaagc gaagcgacac cgtgttcggg ccctgcgtga gtgcgtcggc
     9301 ggggatgacg acatggccgg ccggcagcgc cggcgtcacc gtggctccgt tcacctccac
     9361 cccggcgacg cggctcgaat cgccccggaa atcgagtacc agcggccggc tcgcgtccgc
     9421 cagggcgagc ctgatcgtca cgaggccggt gaccggggcg gttcgctcgg ccgggaggtt
     9481 gaaccgcaga gtgtagcgga gatcgctgat tcgcccggcg cgctcgcggg ccaggtcgag
     9541 tgccacgccg tagtcgggat cccgggcgga cccggggcga cacgccccca gtccgcccaa
     9601 caggagcagc aggtggtggg acttcatccg gggaaccgcc gggaaagacg cggcgcaagg
     9661 gaaggaatca cgcgggtagg atcaggccgc ggagccgggc cccgcaagtg gcgccaccgg
     9721 tctgttcggg gcgcgtgaat agcccggtcc cgccgagttc tcagggtacc ttcgcctcca
     9781 attcggtgat ccagttctgg atcaggacca tctgggcggt ggggacatca gcctgctgga
     9841 agaaatagaa cgcgccttcc aggctcactg cgtaggcgac gtgccgggta tccgaatgat
     9901 accctcgggt ggagaacagg actcggcgcg actgaacccg cagcggcggt cctggttcca
     9961 gtgtagcggc aaccagcccg taatcgaggc tgcggtaaaa gagctcgcgc ccggtggagg
    10021 accagaccgg ctcggtccct cccgcaacgg agacctgcaa ccggccggtg gatacgtcgg
    10081 ggaagggccg gacgaagatc tcgtcctgtc ccgacacatc cgaggcgtac gccagccacc
    10141 ggccatccgg cgaaaccgac ggcgaaaatt cctccgcgtc ggtcgcgacc aatggaatgg
    10201 gggtgctgtc gacgcccggt ctcagcccaa gaatgtcgcg ggcgttgccc gatccggccc
    10261 ggaagatcaa ccagcggccg tctcccgacc aggttccctc gtcgatgctt cgggaagacg
    10321 gtgcgatcgg ctcgaccccg ccggttccgt ccgccgccgt ctggtagaga ccggacaggc
    10381 cgcccaggtc tgatacgaac ccgaccgagc ggccatcccg ggaccagaag ggccggtagt
    10441 tctgggaccc cgccgcggcc acccggaaga agggtccggt atcgagggcc ttgacccaca
    10501 cttcccgtcg gcctcccacc agattggaga ccgcgagccg gctgccgtcg ggtgagagcg
    10561 agggccaccc cagctcgccg atccaggagg gatcgaccag cgagacctga ccggtgggtt
    10621 gaactcggac caggcgagag gtgcgctggg tggcgctata gagcacggta ccgctggcag
    10681 agatcgcgaa gaacggaatc ccgcccgaat tggtcttgac gccatcgatc agctcgaccg
    10741 cctgtccctt gacgtcgccg ctcttaggcg tgaaccggac tgcggctacc gagccgttcc
    10801 cccgggcgat gatcaggtgt ccgctgggca ggtaccaggc tttgagtccc tgcgtgacca
    10861 cgcggggcga ggccgagccc agctccaaca gggcgatgtc gggtggtccc ctctggcgcc
    10921 agatggtcaa caacagctgc cggccgcccg gcaacacgaa aggcgcgcgg agcgcgaatt
    10981 cgtcccgggt ggactcggcc cgcagcacca gctccgccga ttcgcctgag gggcgaattc
    11041 gcatcagggt ccggcccagg cccgcggtgt aatagatcca cccgtcatca ctccagcttc
    11101 ccccataact gatcaccgag tcccgcacga tagtggtcac ggccccgctg gccagggtga
    11161 caagcttgag gtcgcccggg aagccggtca tgaacccgag ggtggatcca tcgggcgaaa
    11221 agaagggtga ccatccattc gcgctgccgg ggatccgggt cgtctccagg cccccctgac
    11281 ggcgcagagt cagcgctcca tcggccgagg agtaaatgaa ggaacgaccg tctggtgaga
    11341 tggcaggctc gccatcgctg tcggtgtagg catccccgaa ctctaccgca aaccgggcaa
    11401 cctcgggctt cactcccgga cggagccagc cccatgcggc gaggattgcc gtgagagcga
    11461 ggccggtgat caggacggac tgacggacag acggatggac ggacggttgc gcggtcgagg
    11521 gtacgaccct ttgcctggtc gcccgggctc cttccgtcag ggcgtccgcg aattccgctg
    11581 cggtcgcgaa gcgatcggct ggcagcttgg ccagcgcggc gagcgtggcg gcctcgacat
    11641 gaagcgggat cgttttccgc tgcagggtga gcggacgtgg ctcttcggtt accacccggg
    11701 ccacgatggc ctgtgcggtg gggccggtga agggtggctc gcccgaaagc atctcgtaga
    11761 gcacgcagcc cagggcgtag atgtcggtgc gggcgtcgag agtgcgctcc cccatcgcct
    11821 gctcggggct catgtagtgg ggcgtgccga gcgacatgcc ggtctcggtc atgcgggagc
    11881 cgccggtccg gctggcggcc agcgcgatgc cgaagtcggc taccagggcc gagccgtcgt
    11941 gcagcaggat gttctcgggc ttaatgtcgc ggtggatcac cccgtggcgg tgggcgtaat
    12001 cgagcgctcc ggccacctcc cgcgcgatcc ggacggcgtc gtcgaccgga agctgtttct
    12061 cccgggtcag ccgatcccgc aacgactcgc cttcgacgaa cggcatcaca tagaacaccg
    12121 taccgtccac ctggcccgag tcgtgaagcc ccaggatatg aggatgctgc aggttcgcgg
    12181 tggtggtgat ctcgtgcagg aaccgctcgg cgccgatcac ggccgcgagc tcgggtcgga
    12241 ggaccttgag cgccaccttg cggtgatggc gaaggtcctg agccaggtac accgtggcca
    12301 tgccgccctg gcccagctcg cgctcgacct ggtagcggtc tgccagggcg gtcgcaagcc
    12361 gttcggccgt gccgcgaagg cttgacggcc tatcgatcgg ggttctcctt cggcgtcggg
    12421 aacggggtcg cgggataggg accgattttc tcgaccgtat agtcgctggc ccagaagtct
    12481 ggcggcccgt cactgtcgac cactttattg cggaccggct tgagaccccg cttgagatag
    12541 gcggcgatgt cgcgcagctc ctgatccgtc aggtggcgcc aggcgggcca cggcatcggc
    12601 ggagcgaggt attttgggct caggggaaaa ttgccctggc cggggatggt ggacgtgatt
    12661 tccacatcag gggtctcgcc cggccgcagt ccatagcgca gtgcgttgaa gatctgacgc
    12721 tcgctgaacc ggcccaggcc cgtcacgtta tccggagtga ggttccgggc tcgggtaatg
    12781 aacggcccga tcatgaacgt gtccgccggt gtgcgtgcac cagcgagcca cccctcggtg
    12841 ccgggattgt cattgccacc accatgacag ccgccacaag cgtggtggat cgccaacagg
    12901 cgaccacgct gcaccgcctc atccggggcg gcggtgctga cctcgttggc ggtcgggaac
    12961 ggggcggccg ggtaggaacc gtttagcttg gcgtacccgc tggcccagaa atcgggcggt
    13021 ccctcgctat cggctacctt gttgctcacc ggcctgacgg cccgtttcag gtaagcggct
    13081 atgtcgcgga gctcctggtc ggacatgtga cgccaggctg gccacggcat gtccgggccc
    13141 aggtacttcg gcgtggccgg gaagttcccc tgaccgggtg tggtggaggt gatttccacg
    13201 tccggcgtgt cccgggggcg gagcccgaat cggagcgcat tgaagatctg ccgctcgctg
    13261 aatcgtccca agcccgtctc gttgtccggt gtcaggttcg gggggcgcag cttgaaccct
    13321 tcgaatgtga actctcccgc cggcgactgc atgcctgcca gatatcctgc gttggccgga
    13381 tcgaatactc cgccgtggca accgctgcac gcgtggccca ccaccagcgc tcgaccacgg
    13441 agtatctggt cgtccgatgt ctccgtccgc ggcgccccgt tgcgatcgct catcgccgtg
    13501 aacgcgacga gtgccaggca ggcgatgccc cctacggcgg tcaggagtga tctggcaagc
    13561 cgggacgaac ggctcatcgc tggcatgacg tcatctcctt ttcacttgat ttcgagaacg
    13621 cccatcatcc cgtgatcttc gtgctgcaga atgtgacagt ggaacatcca tttgccggga
    13681 taatcgtcgt accgcacgat gaagcgcgcc gactcatgtt tcggcacgtt cacgacgtcc
    13741 ttccactggc ggaagggttc cggtaccccg ttacggtcga gtacctgaaa ctggaagccg
    13801 tggaggtgga atgggtgatc catgcccacc aggttttcga tctcccagat ttccgtggct
    13861 ccgaggctag cactcacgtc gacccggtcc agatccatcg gcctgccgtt gatgaagccc
    13921 tgcgtcaaca ccatcaatcg cctcgccgtc
//
LOCUS       DASWKS010000314        13446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2752654, whole genome shotgun sequence.
ACCESSION   DASWKS010000314 DASWKS010000000
VERSION     DASWKS010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13446
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2752654"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..651
                     /locus_tag="VGA78_09015"
     CDS             133..651
                     /locus_tag="VGA78_09015"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9894055.1"
                     /translation="MTALNLEADLEREHPHCFAWAVTCCRADRTEAEDVLHLAYLKVL
                     DGRARFDGRSSFRTWLFGVIRLTAQEQRRRRWIQLRWLDRQSAAGPEAPDPAPDPAEQ
                     TVSADNQWRLGMALARLSRRQQEMMHLVFYQGLSIQEAGMVLGIPVGTARTHYERGKL
                     RLRRLLAEMEGQ"
     gene            648..1052
                     /locus_tag="VGA78_09020"
     CDS             648..1052
                     /locus_tag="VGA78_09020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894056.1"
                     /translation="MSGDRDLFEFFAAKRTGDLGRTPPFQRVREGRGAPGRMRAVSPT
                     RLALGAALGLAALVVLLGVLRRDADDGADAIQLALQISGWRSPTDFLLRSMGSEYLTT
                     IPRIGEVTQWYPLDGGVRRAMAAPDRKGSDSL"
     gene            1049..1495
                     /locus_tag="VGA78_09025"
     CDS             1049..1495
                     /locus_tag="VGA78_09025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894057.1"
                     /translation="MRTVAMLAGIILVAVAHPVHGQQQEPAPEFAKHLFAPELIFKYT
                     RQIELQPAQRTALMQALREVQIDVVDLQLQMAEVAGDLTAELEKAKVDEAAALRLTER
                     ILTLERDIKKRQMTLLIRIKNLLTPDQQARLAAIRDREARQENEPE"
     gene            1508..2602
                     /locus_tag="VGA78_09030"
     CDS             1508..2602
                     /locus_tag="VGA78_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894058.1"
                     /translation="MNPRKSPPIAALMLLASGLIACSDSGTDPDSGRPFDAATMQAGV
                     ASMERIASTPAIESFKLLGRLVSPIGADDGVEPGAPLPGGSAAARLAAMVRRIAGLVG
                     PTTEAQLVPILRSSVLGSTFVYDPAGGRYVVDPARTGAPGNGVRFILYEVDPETHDPR
                     PEAEIGYADLIDEKAASGSALGLRLRVVAHGITHLEYGFELSGLAVSPTLAVNGFLSD
                     GTDRLNFNLRVTGQLIGQAGEVRLDAELEIPSHDFKVAASVEGRVGEVSGDGRVDLTV
                     RAGADVIAVQVQVEDQMLEATFRVNGQLLATAEGDPEHPVIKGEGGRDLTPEEMAALV
                     RIVGLAEAVFHLFYELLEPIGVLVGVGVNL"
     gene            complement(2692..3453)
                     /gene="mazG"
                     /locus_tag="VGA78_09035"
     CDS             complement(2692..3453)
                     /gene="mazG"
                     /locus_tag="VGA78_09035"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX9894059.1"
                     /translation="MTDPSPLARAMSIVADLRVRCSWDRVQTRETLRPYLVEEVHELD
                     HALGEADPAAIREEVSDLLLHLAWQLVLAQELGEFTPDDVAGDLEHKMRRRHPHLFDL
                     GPREGWETLKQKENGRGVLEGLPPLPTLLMAYRLQERAASVGFDWPDATGPLAKVREE
                     LNELESEAAGRTVEPIGGPPDPRLEEELGDLLFSVVNLSRKLAVAPDNALQRANRKFR
                     ERFGAVERRAAERGIDVHRAGLEVLNELWNEIKHI"
     gene            complement(3590..5521)
                     /locus_tag="VGA78_09040"
     CDS             complement(3590..5521)
                     /locus_tag="VGA78_09040"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9894060.1"
                     /translation="MTHQAPALPGLTSEFAERFEVTRELGRGGMAVVLQAHDRKLDRL
                     VALKLLATELSAAVGAERFTREIRLTARLVHPNIVPLYDSGQLGPRLYYVMPFIEGDT
                     LRVRLSRSGPRPITEVIRILSDLAEALAYAHSQGIVHRDIKPENAFWSSDRALLADFG
                     IATMTSTNRAATLTAHGMIIGTLAYMSPEQASGAPAIDGRADLYSLGCVAFELLTGDP
                     PYVRDSPAAVIGAHLSARVPSIAERRADVPVGLAFVVERLLAKDPEGRPATANAFLDE
                     LRDGAAPTPQPGPAPAPHYIPIRDATDPPEITDLCIKGRALLVRAIHGGEGTREKYEM
                     AKVYFENALAKAPTSARALVGLADVFHGLGLRGFMDPEEGMERGNELRRRALATGDMV
                     SEVHVSLGYRVLYWEDDYDTAGLELARAVALDPDNSEARRFYGGWLKIAGRLDEALSH
                     MQAAVRLAPLAPFMHLGLADVLMALGRNDEAVGPLRDALRLAPKYGAALERLEISCHR
                     AGRHEEALDARRTWLGIRGLDRRMELLVQEAARDGWLAAREQDLRRDLDEALAGSEQE
                     DPFRDVKITRQLSDRIIMILAELGDWTQAMDWVERGYLRRPGRLRRVLTDLPFDRHGL
                     AVDPRYARLLRTAGLTELL"
     gene            complement(5596..6318)
                     /locus_tag="VGA78_09045"
     CDS             complement(5596..6318)
                     /locus_tag="VGA78_09045"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX9894061.1"
                     /translation="MNNQKSLIMRQPDLVLTLLILAWPVWEHRVGLPRLQAALAQGRP
                     DALTRSYRRTILLQWSLALLALLIWTLPGRPLADLGLRLPQGWRAGLTLALLGLLGAV
                     LFRQERAVRRDPAAREKVRPQLAAVAWFLPRTRPELAGFTRLGLTAGVCEELLCRGWL
                     FAVLAPWLPVGVTLLLTSLFFGLGHWYQGPAGVAKTGITGLVMGALYLATGSVLVPMV
                     VHAAFDVGSGRVAFLVLGEPPV"
     gene            6377..7009
                     /locus_tag="VGA78_09050"
     CDS             6377..7009
                     /locus_tag="VGA78_09050"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9894062.1"
                     /translation="MPAPPRSARSRRGPAAVYTVRRLDQLRMLASPIRLRLLEAFAAG
                     PCTTKQAATALRLAPTRLYHHTRALEKAGLIRLTGTRQNRGTTEQYYVAIARELAVDP
                     SILAPAEAGLRASVDAAANVFDTSRDELLSAMARQQRHPWPKALGPVAARIPVRATPA
                     ELTRIRRQVLRLLAQLKSRKPKRAGAGDRASGSVVLAFVPIQVSASKRPR"
     gene            7006..8088
                     /gene="alr"
                     /locus_tag="VGA78_09055"
     CDS             7006..8088
                     /gene="alr"
                     /locus_tag="VGA78_09055"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9894063.1"
                     /translation="MTTSPELSRAWVDIDLAALRRNAATVAAAVRAPLLPMIKADAYG
                     LGAVPVARALESLNPWGYGVAALDEAQALRRAGIERPILVFTPLLPAWAGAYRAADAR
                     PCIGDLEALQAWLALGGAPFHLEIDTGMRRAGIPFDDAEMLDQLRGLLPSAEGWEGIF
                     THFHSADTDPASARIQWDRLQQAIATLGRRPRAVHAASSAGSFVDRMYGGEFARPGIY
                     LYGGRAGTHQPETVARFQARVVAVRRVAEGDSVSYGASWIAARVTTIATIGAGYADGV
                     LRSLSGRGRIEGAGTVHPIVGRVTMDMTMIDAGDSPMRPGDSVTIFGGQVSLDQQAEA
                     AGTISYELLTSLGTRVARRYPGGRAD"
     gene            8149..8391
                     /locus_tag="VGA78_09060"
     CDS             8149..8391
                     /locus_tag="VGA78_09060"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HEX9894064.1"
                     /translation="MNPHFGSLVMGLAAQASSILEGQLPAEAAGSDPREVARALIDTL
                     GMLEEKSKGNLTEDEQKLLGEVLTGLRFRFVQGQSS"
     gene            8391..9605
                     /locus_tag="VGA78_09065"
     CDS             8391..9605
                     /locus_tag="VGA78_09065"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEX9894065.1"
                     /translation="MPSVRPSARPPARLSVRRAAIIVLDGVGIGATPDQKAYGDLGSD
                     SLGNVAQAVGGLRLPNLERLGLGRCRPLAGLAPVDVPQAAFGIAHPMGAGKDSTTGHW
                     ELCGLVLKRPFPTYPAGFPADLISEFARRTGRGVLGNRAASGTAVLDQFGREQARTGQ
                     WIVYTSADSVFQVAAHEEVIPLEELYAACDTAREILQGEHGVSRVIARPFRGENGAWL
                     RVGDHRRDLSLPPPADTLLDRCEQGLVPRVGVGKVDDLFARRGISSVHTASNAQAFDL
                     IAGALGSMQRGFLLANVIEFDQSWGHRNDVPGYVKGLAQLDEAIPGLVAKVQPDDLII
                     FTADHGNDPTTPSTDHSREAVPVLVFGPSVSPVPLGERATFADIGQTVAEFFELDPLP
                     AGTSFLGEVWRG"
     gene            9598..9984
                     /locus_tag="VGA78_09070"
     CDS             9598..9984
                     /locus_tag="VGA78_09070"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEX9894066.1"
                     /translation="MGDGLIDAARRAQQQAYAPYSRFRVGAAIEAEDGSVFTGCNVEN
                     ASYGLTMCAERVAVGAAVAAGVRRFRRVIVVSDSDPPAPPCGACRQVLYEFAPDAEVI
                     AIGPASSRQWQAGELLPAAFSSSQLR"
     gene            9981..11183
                     /locus_tag="VGA78_09075"
     CDS             9981..11183
                     /locus_tag="VGA78_09075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894067.1"
                     /translation="MRWLLPLATGALVLAGCEEELTVPGRCPELCPGGQPLVQDTVVL
                     AIEGSDTAFFGYSGHTGTTSLLVSNGLEAGEARSWVRFPQRSDSVTVSSVVHPYTTDS
                     VVFAFNLVARDTLVSGLKLYLHRVPLAFDSLTTFPDIEAALGPASLIDSIAVPDSVKS
                     GTIRALITDSTTLANLIPPDDSGRLALGIRMVADEPTGVRLSAIGGSGGAAFATYVKA
                     DVADTALQRQTISLSSEDNGFALASAGDAIDPDLLYAGRRPSGRSVLRFPIPDFFRDS
                     SVILVRATLELTPAEPLLGLRGDAALIDIRGVIKDIGAKSTPSFAVNGSASLPTDGST
                     ALFAVDVLGIVQLWGLPEGGLPPTVLVALAPDGGSFHRPVFRSTRSAEGKPRLRITYM
                     RPSQVEQP"
     gene            11180..12322
                     /locus_tag="VGA78_09080"
     CDS             11180..12322
                     /locus_tag="VGA78_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894068.1"
                     /translation="MIRRLILFCAVAALLPGYAAAQASMFGTRVLGLPLLPLSARAQG
                     MGGGNALFDPEVGLNPAALWITQRHIGSVSLRHFWRSSDNPFGSASGNDTQFPLIMVA
                     GPVGARWDYGVSVSGFTDRTFALALTDTLLLRDVPVAVNDTLVSRGGVTDIRGALAYT
                     VSPRLAVGLGLHLLTGTNKIEYRRRFSDSSYVPVRIRNELSFSGPGLSAGVSAQPVNG
                     LRLAGMVRWDGDLAYYKDSTQLESIPLPITLAVGFQVQAGSRLLLAGQGLRRNWSVTN
                     EFVTSEGGLGSRNTTEASLGFEWIRNRARPNRFPLRAGIRYAQLPFPLVEAQKGREIQ
                     VSLGTGFRFTADRGSLDIALERAWRDDGGPFKERSFMISIGVGIRP"
     gene            12462..>13446
                     /gene="miaB"
                     /locus_tag="VGA78_09085"
     CDS             12462..>13446
                     /gene="miaB"
                     /locus_tag="VGA78_09085"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX9894069.1"
                     /translation="MKRVYIETYGCQMNVADTELMLGVLGGAGYVQTELPAEADVMLV
                     NTCAVRDNAEQRVVGRVGELQRFRRPGSVLGVVGCMAQRLGPALLARDAQVDLVAGPD
                     AYRNLPALLKEAGSGERIADTSFRSWEHYEDVPPVRRPGPTQFVTVQRGCNYKCTFCI
                     VPYTRGPERSRKLQDVVLEVTGLADQGTTEVTLLGQTVNSYHDGTHDFADLLRAVGRI
                     AGIRRLRFTSPYPTDFSDRVLEAMAATAAVCEHVHLPAQSGSNAVLRRMLRRYSREEL
                     LEVVAKLRSALPGVTLSTDLIVGFPGETEAQFGETLSLVEEASFDDAYTFRY"
BASE COUNT         2099 a         4526 c         4628 g         2193 t
ORIGIN      
        1 cacccggcac cgcacgacgc accgcacgcg gaacctggaa cccggaacgc ggaacccctg
       61 tcctataccg ctccccccca gaacaccaac ctttcaacat gacgccgccc gccttcggag
      121 cgaaccccgc gcatgacggc cctcaatctg gaagccgacc tggagcggga acacccgcac
      181 tgctttgcct gggcggtgac ctgctgccgg gcggaccgga ccgaggcgga ggacgtgctg
      241 cacctggcgt atctcaaggt cctggacggc cgggctcgct tcgatggacg gtcttcgttc
      301 cggacctggc tctttggggt gattcgtctg acggcccagg agcagcgccg gcgccgctgg
      361 atccagttac ggtggctcga tcgccagtcg gccgcggggc ctgaggcgcc cgatccggcg
      421 cccgatcccg cggaacagac cgtctcggcc gacaaccagt ggcggcttgg gatggcattg
      481 gcccggctct ctcggcggca gcaggagatg atgcacctgg tgttctatca gggtctgagt
      541 attcaggagg cgggcatggt cctcgggatt ccggtgggca ctgcgcgcac ccactacgag
      601 cggggcaagc tgcggctgcg gcgtctgctg gccgagatgg agggacaatg agcggcgatc
      661 gcgatctctt cgagtttttc gcggcgaagc ggaccggcga cttgggccgg acgcccccct
      721 ttcaacgagt ccgcgaaggt cggggcgcgc caggtcggat gcgagcggtg tctccaaccc
      781 ggctggcgtt gggcgcggcc ctgggactcg ccgccttggt ggtgctcctg ggagtgctcc
      841 gccgggacgc ggacgacggg gccgacgcga tccagctggc cctgcagata tccggatggc
      901 gatcgccaac cgactttctg ctccggagca tgggttccga gtacctcacg acgattcccc
      961 gaatcgggga agtcacccag tggtatcccc tcgatggcgg cgtccgccgt gctatggcgg
     1021 cgcccgacag aaagggaagt gattcattat gagaaccgtg gcgatgctgg ccgggatcat
     1081 cctggtggcc gttgctcatc cggtccatgg ccagcagcag gagcccgctc cggaattcgc
     1141 caaacatctc tttgcgccgg agctgatctt caagtacacc cggcagatcg agctgcagcc
     1201 ggcccaacgg accgctctca tgcaagcact ccgtgaggtg cagatcgacg tggtcgacct
     1261 ccagctgcag atggccgagg tcgccgggga cctcaccgcc gaattggaaa aggccaaagt
     1321 ggacgaagcc gccgcgctgc gcctcaccga gcggatcctg acgttggaac gggacatcaa
     1381 gaagcggcag atgacgctgc ttatccgcat caagaacctg ctgacccccg accagcaggc
     1441 gcgactggcc gcaatccgcg atcgcgaagc ccggcaggag aatgaacccg agtaggagga
     1501 acgacccatg aacccgcgca aatcgccacc gatcgcggcc ctgatgctgc tggcctccgg
     1561 tctcatcgcc tgttccgatt cgggcaccga ccccgacagc ggtcgtccgt tcgatgccgc
     1621 gactatgcag gctggggtgg caagcatgga gcggatcgct tctacgccgg cgatcgagag
     1681 tttcaagctg ctgggccggc tggtgagccc gattggtgcc gacgacggtg tcgaaccggg
     1741 ggcgccgctt cctggtggct cggctgcggc gcgactcgcc gcgatggtcc gccgcatcgc
     1801 gggcctggtg ggacccacga ccgaggcgca gctggttccc atcctccgct cgtcggtgct
     1861 gggaagcact ttcgtatatg accccgccgg cgggcggtac gtggtcgatc cggcacggac
     1921 cggtgccccg ggcaacggcg tccgcttcat tctgtacgag gtcgaccctg agacccatga
     1981 cccgaggcca gaggccgaga tcggctacgc cgatctgatc gatgagaagg cggcctcagg
     2041 atcggcactg ggcctgcggc tgcgagtggt ggctcacggg atcacccacc tggaatacgg
     2101 cttcgagctg agcgggctcg ccgtgagccc gacgctagcg gtgaacggct tcctgagcga
     2161 cggcaccgac cggctcaact tcaatttgag ggtgacgggc cagttgatcg ggcaggctgg
     2221 ggaggttcgg ctcgacgccg aattggagat cccctcgcat gacttcaaag tcgccgcgtc
     2281 ggtcgaggga agggtgggcg aagtctccgg cgatggccgg gtcgatctca cggtgcgggc
     2341 cggcgccgat gtcattgcgg tccaggtcca ggtcgaggac cagatgctcg aggcgacgtt
     2401 cagagtcaac ggacagctcc tggccacggc ggaaggtgat ccggagcacc cggtcatcaa
     2461 gggggaaggc ggccgggacc tcacgcccga ggaaatggcc gcactggtcc ggatcgtcgg
     2521 actggccgaa gcggtattcc acctgttcta cgagctgctg gagccgattg gagtcctggt
     2581 aggcgttgga gtcaatctct gagattcagc gattgagcga ttcagtgctt cagcgattgg
     2641 gcctaacagg gctccttttc tcaatcgctg aagcgctaaa tcgctaagtc gctaaatgtg
     2701 ttttatctcg ttccacaact cattcagcac ctcaaggccg gcacggtgca catcgatccc
     2761 gcgttcggcc gcgcgtcgct ccaccgcgcc gaagcgctcc cggaactttc gattggcgcg
     2821 ctgcagcgca ttgtcgggag cgacggccag cttgcgggac aggttcacga ccgagaagag
     2881 caagtccccc agttcctctt ccagccgggg atcgggcggg ccgccgatcg gctcgacggt
     2941 ccgtcccgcc gcctcggatt ccaattcgtt cagctcttcc cgtactttgg ccagcggtcc
     3001 ggtcgcatcg ggccaatcga atcccaccga agccgcccgc tcctgcagcc gatacgccat
     3061 cagcagggtc gggaggggcg ggaggccctc gagcacgcct cggccgtttt ccttctgctt
     3121 gagcgtttcc cacccttccc ggggccccag gtcgaagaga tgcggatgcc gccgccgcat
     3181 cttgtgttcg agatcaccgg ccacgtcgtc gggggtgaat tcacccagct cctgcgccag
     3241 cacgagttgc caggcgagat ggagcagcag gtcgctcacc tcttctcgaa tcgccgccgg
     3301 atcggcttcg cccagcgcgt ggtccagctc gtggacttcc tcgaccagat aggggcgcag
     3361 ggtctcccgg gtctggaccc ggtcccagga acagcgcacc cgcaggtcgg ctacgatgga
     3421 cattgctcgg gcgagggggg atgggtcagt catggagggg agaataagtg cagaatgccg
     3481 aatgcccagt gcccagggca gagggggcac gatgagcgct aaggtgtgcc ccctctgccc
     3541 tgggcattca gcattgggca ctctgaattc actcccccct cacccgcact tacagcagtt
     3601 cagtcagccc cgcggtgcgc aggagtcggg catatcgtgg atcaaccgcg agtccgtggc
     3661 gatcgaaggg aaggtcggtg aggacgcgcc gcagccggcc cgggcgccgc aggtagcccc
     3721 gctcgaccca gtccatggcc tgggtccagt cgcccagctc ggccagaatc atgatgatgc
     3781 ggtcggaaag ctggcgggtg atcttgacgt cacggaaggg gtcctcctgc tccgagcccg
     3841 ccagcgcttc gtccagatcc cgtcgcaggt cctgctcccg ggccgccagc cagccgtcgc
     3901 gggccgcttc ctgtaccagc aactccatcc gccggtccag gccccggatg cctaaccagg
     3961 tccggcgggc gtcgagggcc tcctcgtgcc gtccggcgcg gtggcagctg atctccagcc
     4021 gttccaaggc ggcgccgtac ttgggggcca gccgaagggc atcgcgcagg gggccgactg
     4081 cttcgtcatt acggcccagg gccatcagga catctgccag gccgaggtgc atgaacggcg
     4141 ccaggggcgc gagccggacc gcggcctgca tgtggctgag cgcttcatcg agccggccgg
     4201 cgatcttgag ccagccgcca tagaagcgcc gcgcctccga gttgtcggga tccagcgcca
     4261 ccgcgcgggc cagctccaac ccggcggtat cgtaatcgtc ctcccagtac agcacccggt
     4321 agccgagcga gacgtgtacc tcgctgacca tatcgccggt ggccagcgct cgacgccgta
     4381 gctcgttgcc ccgctccatc ccctcttccg gatccatgaa gccgcgcagc cccagcccgt
     4441 ggaacacatc ggccaggccg accagggccc gggcactggt gggtgccttc gccagcgcgt
     4501 tctcgaaata caccttggcc atttcgtatt tctcgcgggt gccttcacct ccgtgaatgg
     4561 cgcggaccag cagggcgcga cccttgatgc acaggtcagt gatctcgggc gggtcggtgg
     4621 cgtcgcggat cgggatgtaa tggggcgccg gcgccggccc tggctggggc gtgggcgccg
     4681 cgccatcccg cagctcatcg aggaaggcgt tggcggtggc gggccggccc tcggggtcct
     4741 tcgccaggag ccgctcgacc acaaacgcca gaccgaccgg aacatcggcc cgccgctccg
     4801 cgatcgacgg cacccgggcg ctcaaatggg ccccgatcac cgcggccggc gagtcgcgga
     4861 cgtagggcgg gtccccggtg agcagctcga aggcgacaca gccgaggctg tagagatcgg
     4921 ctcggccgtc gatcgccggg gcgcccgacg cctgttcggg actcatgtag gccagcgtgc
     4981 cgatgatcat gccgtgggcg gtaagcgtgg ccgctcgatt ggtgctggtc atggtggcga
     5041 tgccgaagtc ggccaacagg gcgcggtcgc tggaccagaa ggcattctcc ggcttgatgt
     5101 cgcgatggac gatgccctgg gagtgggcgt aggccagcgc ttccgccaga tcggacagga
     5161 tccggatgac ctcggtgata ggccggggcc ccgaacggga cagccgcacc cgcagcgtgt
     5221 cgccctcgat gaagggcatg acatagtaga gccgcgggcc cagctgaccc gagtcataca
     5281 acggcacgat gttggggtgg accagccgag cggtgagacg gatctcgcgg gtgaaacgct
     5341 ccgcgcctac ggcagcgctg agctcggtgg cgagcagctt gagcgccacc agccggtcga
     5401 gcttgcggtc gtgggcctgc agtacgacgg ccataccgcc ccgccccagc tcgcgcgtca
     5461 cttcgaaccg ctcggcgaac tccgaggtca ggccgggcag ggccggagcc tggtgggtca
     5521 tgattcgtct cccgggccca atctcccccg gcggccccgg ggccgcaacc cgtcgagcgg
     5581 aatccctgcc gaccgtcaga ctggaggttc ccccagaacc aggaacgcga cccggcccga
     5641 tcccacgtcg aacgccgcgt gcactaccat cggcaccagc accgatccgg tggccaggta
     5701 cagcgcgccc atcaccaggc cggtgatccc ggtcttggcc acgcccgcgg gtccctgata
     5761 ccaatggccc agaccgaaga acaacgaggt cagcaacagg gtgacgccga ccggcagcca
     5821 gggggccagc accgcgaaga gccagccgcg gcacagcagt tcctcgcaga ctccggcggt
     5881 caggccgagc cgggtgaagc cggccaactc ggggcgggtc cggggaagga accacgcgac
     5941 cgcggccagc tgaggccgga ccttctcccg cgccgcgggg tcccgccgca ccgcgcgctc
     6001 ctgccggaac aggaccgccc ccagcaggcc gagcagcgcc agagtgagcc cggcccgcca
     6061 tccctggggc agccgcagcc cgaggtcggc gaggggccgg cccgggaggg tccagatcag
     6121 gagagccagc agcgccagag accattgcag caggatggtc cggcggtagc tccgagtcag
     6181 ggcatcgggc cggccctggg ccagggccgc ctgaagccgg ggcaggccga cccggtgctc
     6241 ccataccggc caggccagga tgaggagggt gaggacgaga tcgggctggc gcatgatgag
     6301 gctcttctga ttattcaata agacatgaat aatcgactga ttgcctggcg ggcaagcccc
     6361 cgctagactc gggcccatgc ccgccccgcc ccgctcggcc cgctcccgcc ggggcccggc
     6421 cgcggtctac accgtccgcc ggctggatca gctccgcatg ctggcgtcgc cgatccggct
     6481 ccggctgctg gaggcgttcg ccgccggtcc ctgtaccacc aagcaggcgg ccaccgcgct
     6541 ccggctggcc ccgacccggc tctaccacca cacccgcgcg ctggagaagg ctgggctgat
     6601 ccggctgacc gggacccgcc agaaccgggg gacgaccgag cagtattacg tcgccatcgc
     6661 gcgggagctg gcggtggacc cgtccatcct ggccccggcc gaggccggtc tccgggcctc
     6721 ggtcgatgcc gccgcgaacg tgttcgatac ctcccgcgac gagctcctca gcgccatggc
     6781 ccggcagcag cgccatcctt ggcccaaagc actgggcccg gtggccgcac ggatcccggt
     6841 gcgggccacg ccggccgagc tgacccggat ccggcgccag gtgctgcgcc tgctggcgca
     6901 gctcaagagt cgcaagccaa agagagccgg cgccggggac cgtgcctccg gcagcgtcgt
     6961 cctcgccttc gtcccgattc aggtttccgc gtccaagcgc ccgcgatgac caccagcccg
     7021 gagctcagtc gcgcctgggt cgacatcgac ctagcggcgc tccggcgcaa cgcggcgacc
     7081 gtcgccgccg cggtccgcgc cccgttgctt cccatgatca aggccgacgc ctatggcctg
     7141 ggtgcggtcc cggtggcgcg ggccctcgag tcgctcaatc cgtggggcta cggcgtcgcg
     7201 gcgctcgatg aagcccaggc gctgcgccgg gccggtatcg aacggcccat tctggtcttc
     7261 acgccgctgc tgccggcctg ggccggtgca tatcgggccg cggacgctcg tccctgtatc
     7321 ggcgacctcg aagcgctgca ggcctggctc gcgctcggcg gcgcgccgtt tcacctggag
     7381 atcgataccg gcatgcgtcg cgcgggcatc ccgttcgacg atgccgagat gttggaccag
     7441 ttgcggggcc tgttgccatc cgccgagggg tgggaaggga tcttcaccca ttttcactcg
     7501 gcggacaccg atccggcttc ggcccggatc cagtgggacc ggctgcagca ggcgatcgct
     7561 accctggggc gtcgccctcg cgcggtccac gcggcctcga gcgccggcag cttcgtggac
     7621 cggatgtacg gtggcgaatt cgcccgcccc ggcatctatc tctacggcgg tcgcgccggc
     7681 actcatcagc ccgagacggt cgcccggttt caggcccggg tagtcgcggt ccggcgggtg
     7741 gcggagggcg acagcgtcag ctacggcgcc tcgtggatcg ccgcccgggt caccaccatc
     7801 gctacgatcg gggcgggcta cgccgacggg gtcctgcgat cgctttccgg ccgggggcgg
     7861 atcgaggggg ccgggacggt gcacccgatt gtcggccggg tgaccatgga catgaccatg
     7921 attgacgcgg gcgactcgcc gatgcggccg ggcgacagcg tgacgatctt cgggggccag
     7981 gtatcgctgg accagcaagc agaagccgcc ggaaccattt cctatgagct cctgacctcg
     8041 ctcgggaccc gggtggctcg gcggtacccg ggcggacggg cggactgacg caccgacgga
     8101 ctgacgcacc gacggactga cggacaggcg gacaggcgga cggtaactat gaatccacac
     8161 tttggttctc ttgtcatggg ccttgccgcg caggcctcgt cgatcctcga aggtcaattg
     8221 ccggcggaag cggctgggtc cgacccgcgc gaggttgctc gtgcgctgat cgacacgctc
     8281 ggcatgctgg aagagaagag caaagggaac ctcacggagg acgaacagaa gttgttgggt
     8341 gaagtgttga ccggcttgcg atttcgcttc gtgcaagggc aatcgagcta gtgccgtccg
     8401 tccgtccgtc cgcccgtccg cccgcccgcc tgtccgtccg ccgcgccgcg atcatcgtcc
     8461 tcgacggggt cgggatcggc gccacgcccg accagaaggc gtacggcgat ctgggcagcg
     8521 actcgctggg caacgtcgcc caggcggtcg gcgggctccg actgccgaac ctggagcggc
     8581 tggggttggg gcgctgccgc ccgctcgctg gtctcgcgcc ggtggatgtg ccgcaggccg
     8641 ccttcggcat cgcgcatccg atgggagcgg ggaaggacag caccaccggt cactgggaac
     8701 tgtgcggttt ggtgttgaaa cggccgtttc ccacctatcc agccgggttc ccggccgacc
     8761 tgatcagcga gtttgcccgt cggaccgggc gaggcgtatt gggcaatcgg gccgcgtccg
     8821 ggaccgcggt cctggaccag ttcggtcggg agcaggcgcg caccggtcag tggatcgtgt
     8881 acacctcggc cgacagtgtg tttcaggtcg ccgcccacga ggaggtcatc ccgctggagg
     8941 agttgtacgc cgcctgcgac acggcccgcg agatcctgca gggcgagcac ggagtgtcgc
     9001 gggtcatcgc gcgccccttt cggggagaga acggggcgtg gcttcgggtc ggggaccacc
     9061 ggcgcgatct gagcctcccg cctccggccg acacgctgct ggaccgctgc gagcaggggc
     9121 tggttccccg ggtgggggtc ggcaaagtgg atgatctctt cgcccggcgg gggatctcca
     9181 gcgtgcatac cgccagtaac gcgcaggcct tcgacctgat cgcgggagcc ctggggtcga
     9241 tgcagcgcgg cttcctgctg gcgaacgtca tcgagttcga ccagtcctgg ggtcaccgca
     9301 acgacgtgcc aggctatgtc aaaggcctgg cccagctgga cgaggccatt ccggggctgg
     9361 tcgcaaaggt ccaaccggat gatctgatta tctttaccgc tgatcacggg aacgacccaa
     9421 ccactccctc cacggatcac agccgggagg cggtgccggt gctggtcttc ggtccctcgg
     9481 tcagcccggt gcccctgggt gagcgggcca cgtttgccga catcgggcag acggtggcgg
     9541 agttcttcga actcgaccca ctgccagcgg gcacgtcctt tcttggtgag gtttggcgtg
     9601 ggtgatggat tgatcgacgc ggcgcggcga gcgcagcagc aggcatatgc cccctactcc
     9661 cgattccggg tcggcgccgc catcgaagcc gaagacggct ccgtcttcac cggctgcaac
     9721 gtggaaaacg cttcgtacgg gctgaccatg tgcgccgaac gggtggccgt gggcgcggca
     9781 gtggccgccg gggtgcgccg gtttcgccgg gtcattgtcg tcagtgacag cgatcctccg
     9841 gcgccgccgt gcggggcctg ccgccaggtg ctctatgagt tcgcgccgga tgccgaggtg
     9901 atcgctatcg gtccggcatc gtcccggcaa tggcaggccg gggaactgct gccggccgcc
     9961 ttttccagca gtcaactgcg atgaggtggc tgcttccgct ggccactggg gcgctggtgc
    10021 tcgccgggtg cgaggaggag ctcaccgtac cgggccgctg cccggagttg tgtcccggcg
    10081 gccagccgtt ggtccaggac accgttgttc tcgccatcga gggcagcgat acggccttct
    10141 tcggctactc cggccacacc ggcaccacgt cgcttctggt ttccaacggc ctggaggcgg
    10201 gtgaggcccg gtcgtgggtg cgattccccc aacggtccga ctccgtcacg gtgtcttcgg
    10261 tggtccaccc ctacaccacc gactcggtgg tgttcgcgtt caacctggta gcccgggaca
    10321 ccctggtatc gggactcaaa ctctatctcc atcgagttcc gctggccttc gactcgctca
    10381 ccacctttcc cgacatcgag gcggcgctgg ggccggccag cctgatcgac agcatcgcgg
    10441 tgcccgactc ggtgaaatcc ggcaccatcc gggctctgat caccgacagc accacgctcg
    10501 ccaacctgat tccacccgac gacagcgggc gcttggctct ggggatccgg atggtggccg
    10561 acgagcctac cggggttcgg ctcagcgcta ttggcgggag cgggggcgcc gcctttgcca
    10621 cctatgtgaa ggccgacgtg gctgacacgg cgttgcagcg ccagaccatc tcgttgagct
    10681 ccgaggacaa cgggttcgcg ctggcgagcg ccggcgacgc aatcgatccc gatctgctct
    10741 atgccggccg gcggccgtcc ggtcgcagcg tgctgcggtt ccccatccct gatttcttcc
    10801 gcgattcgag tgtgattctg gtgcgagcca ccctggagct cacgccggcc gagccgctgc
    10861 tcgggcttcg aggcgacgcc gccttgatcg acattcgggg cgtgatcaag gatatcggcg
    10921 cgaaatccac cccatcgttc gcggtgaatg gttcggcctc tctgccgact gacggatcga
    10981 cggcgctgtt cgccgtcgat gtgctgggga tcgtgcagct ctggggcctg cctgaaggcg
    11041 gcctgccacc gaccgtgctg gtggcgctgg cgcccgacgg cggctcgttc caccggcccg
    11101 tgttcaggtc cacccggtcg gccgagggca aaccgcgact gcgaatcact tatatgcgcc
    11161 cgtcccaggt cgagcagcca tgatccgccg actgatcctg ttctgtgccg tggcggcgct
    11221 cctgcccggc tacgcggcgg ctcaagcctc gatgttcggg acccgggtgc tgggccttcc
    11281 cctcctgccg ttgtcggccc gggcccaggg gatgggcggc ggaaacgcgc tgttcgatcc
    11341 cgaggtgggt ctcaatccgg cggccctctg gatcacccag cgccacatcg gctcggtctc
    11401 gctgcgacat ttctggcgca gctcggacaa tcccttcggc agcgccagcg gcaatgacac
    11461 ccagttcccc ctgatcatgg tggccggccc ggtcggcgcc cggtgggact atggcgtcag
    11521 tgtgtcgggc ttcaccgacc gcactttcgc gctggccctg acggatactc tgctgctgcg
    11581 cgacgtcccg gtggcggtca acgatacgct ggtctcccgg ggcggcgtga ccgacatccg
    11641 gggggccctc gcgtacaccg tcagtccccg gctggccgtg ggtctgggcc tccatctgct
    11701 gaccggcacc aacaaaatcg agtaccggcg ccggttcagt gattcgagct acgtgccggt
    11761 gcgaatccgg aacgagctct cgttcagcgg gcccggtttg tcggccgggg tgtcagccca
    11821 accggtcaac ggcctgcggc tggcggggat ggtgcgctgg gacggcgatc tcgcctatta
    11881 caaggactcg acccagctgg agagcattcc gctgcccatc acgctggccg tggggttcca
    11941 ggtgcaggcc gggtcgcgcc tgctgctggc ggggcaggga ctgcgccgca actggtcggt
    12001 gaccaacgag ttcgtcacca gcgaaggcgg actgggctcc cgcaatacca ccgaagcctc
    12061 gctcggcttc gagtggatcc gaaatcgtgc gcgtcccaac cggtttccgc ttcgtgccgg
    12121 gatccgctac gcccagttgc ccttccccct ggtggaggcg caaaaagggc gcgaaatcca
    12181 ggtgagtctc ggaaccggct tccggttcac cgccgatcgg ggcagcctgg acatcgcgct
    12241 ggaacgggcc tggcgcgacg atggcggccc gttcaaggag cggagcttca tgatcagcat
    12301 cggggtcggt attcgaccct aagttcttct tcgcgtgcac aggaaatact gaacagtgaa
    12361 cagtgaacag tgaacagtga acagtgaaca gtgaacagtg aacagcccgg cccccgttga
    12421 ccgttgaccg ttcaccgttc acgggatgcg gggtgagagg tatgaagcgg gtttacatcg
    12481 agacctacgg ttgtcagatg aacgtcgccg acaccgagct catgctcggg gtgttaggcg
    12541 gagccgggta cgtccagacc gagctccccg ccgaggccga cgtcatgctg gtgaatacct
    12601 gcgccgtccg ggacaacgcg gagcagcggg tggtggggcg ggtcggcgag ctgcagcggt
    12661 tccggcggcc cggcagcgtc ctgggcgtgg tgggatgcat ggcccagcgg ctggggccgg
    12721 ccctgctggc gcgcgacgct caggtggacc tggtggcggg gccggatgcg taccgaaacc
    12781 tgccggcact cctcaaggaa gccggaagcg gggagcggat cgccgacacc tcgttccgtt
    12841 cctgggagca ttatgaggac gtcccgccgg tccgccggcc ggggcccacc caattcgtga
    12901 cggtccagcg aggctgcaat tacaagtgca ccttctgcat cgttccgtat acgcggggac
    12961 ccgagcgcag tcgtaaactc caggacgtgg tcctcgaggt gacggggctg gccgaccagg
    13021 ggaccaccga ggtcacgctg ctcggccaga ctgtcaactc gtatcacgat ggcacccacg
    13081 atttcgcgga tctgttgcgc gcggtgggcc ggatcgccgg catccgccgg ttgcgcttca
    13141 ccagccccta tcccaccgat ttcagcgacc gggtgctgga ggccatggcc gcgacggccg
    13201 cggtctgtga gcacgtgcat ttgccggctc agagcggatc gaacgcggtg ctgcgccgga
    13261 tgctccggcg ctacagccgg gaagagttgc tcgaggtggt ggcgaaactg cgaagcgccc
    13321 tgccgggcgt cacgctgtcg accgacctca tcgtggggtt ccccggcgaa accgaggccc
    13381 agttcggcga gaccctctcc ctggtggagg aggcgtcgtt cgacgacgcc tacaccttcc
    13441 ggtatt
//
LOCUS       DASWKS010000315        22338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2027082, whole genome shotgun sequence.
ACCESSION   DASWKS010000315 DASWKS010000000
VERSION     DASWKS010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 22338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2027082"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..1119)
                     /locus_tag="VGA78_09090"
     CDS             complement(304..1119)
                     /locus_tag="VGA78_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894070.1"
                     /translation="MQLLIPHRISRIMTATVLALLAAPTMEAQEIWPIMGERNYFRLE
                     AMRSSFDDVEVDLANGIAEAALAISLGQRHRLSFSLPIARFSPSESSLSGSLVGNPYI
                     GLDFGASSTGWYGQVGGRLPVASEDEASARFVGLFTDFDRAEAFILDVVSITTTLGYR
                     HHESSGLTIGVRLGASGWIPSGDAAGDTEVLAHYGFRVGYDRQRAILGVGFTGRLLVT
                     EEDAEDRATHQVAFDLAYRFDRVIPAVGLRLPLDEELSSDLNAVVIVALKLLW"
     gene            1315..1773
                     /locus_tag="VGA78_09095"
     CDS             1315..1773
                     /locus_tag="VGA78_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894071.1"
                     /translation="MNGRTIRGAGLAALLLLAACGGDDDGAGPSPSGLTGTWRATKVE
                     LVNVANPTEKVELVALGMVLTAELNANETCRITSTFPGQPEEVITGTWSSSSEVFTIR
                     HSEGGNTITWQFDWNLSGNTLTLSGADNELDFDGDDLGDPAKLNLVLVRQ"
     gene            complement(1885..4554)
                     /locus_tag="VGA78_09100"
     CDS             complement(1885..4554)
                     /locus_tag="VGA78_09100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894072.1"
                     /translation="MRLPPGLRRVFRLDSGRSDADPDIRSEIEFHLQTRIDELVAQGM
                     SPAAARDAAMGQFGSPERVAAEVGDIDARIQAGTGRREWWSGVMQDLRISLRGARRTP
                     LYALVASITFALGIGANAAVFSLLDAVVIRPLPFPGLDRLVRIYEHDTKEDRPFGQIT
                     IADFRDWQSQTTTFEGLAAFRYRFFTLTGTGEAQSLMGGQVSPAFFDILGIRPFIGRA
                     FRNEEGASGAPGVAILSHGAWVRLFGADSSIVGRAIRLNNEEAEVIGVLPREFVNPLG
                     EPLDVWTPSDFEAVASDQARARRMHFLAGFGRIREGIEFERANEELLTVGRRLETDHR
                     EMNKGHLPQMIPLQEAGISTVRPVLWLVMGAVGLVLLIACANLANLVFARTLSRSREL
                     AVRSALGAGRWRLVRQVMIEQLLLAGFGGVIGVLAASWTSAAFVGLLGQSMPRAELVR
                     TDGRVLVFALMLTLVAALASGLLPAFHAARADFSDALKAGSHGSTLSRQSHRLRSLLV
                     TVQVGLAAVLIVGSALALRSLSTLLDQELGFETESVWVFSAPAVPARYPEAPQILAFQ
                     ADFLERLRSLPGVASASAAYSAPMLNVSTTSIVPEGVILPPGPAPAVGYNAAYPDYFR
                     VMGIPLLRGRLMDARDRMDAPPVVVVNQALADRHWPGQHPIGKRARMGPDPNAPWVEV
                     VGVVANIRRRNVQLPPEPEVYYPLTQDVTRGPSYVVRVAGDPAPVLAGIRAALRALDR
                     EIPLGNLRPLTEVVAGSLRQPRFLSALLTLFGGLALVLAAVGIYGVIAFLVAERRREI
                     GVRLALGAGSARVVRQTLWRGLRPVLAGLGLGLVAAVLAGRLAANLFYQVKAADPLAL
                     GAAAVVLLLAGVVGCLAPARRAAKVEPGIVLRE"
     gene            complement(4556..4894)
                     /locus_tag="VGA78_09105"
     CDS             complement(4556..4894)
                     /locus_tag="VGA78_09105"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9894073.1"
                     /translation="MPRPELDLLRGTLDLLVLRTLSAGPLHGYAIAAAIKQRTDDAIL
                     VEEGALYPALHRLESRRWVAADWGYSDNNRKARYYSLTAAGRRQLKTQVSLWQRYVDA
                     VAKVLASEEV"
     gene            complement(4998..6710)
                     /locus_tag="VGA78_09110"
     CDS             complement(4998..6710)
                     /locus_tag="VGA78_09110"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9894074.1"
                     /translation="MKHPASSLTLIALLCAAPASAQSDSTRILADLVITGAKVWSTDG
                     ALNPDAIAILNDRIVAVGTADGILALAVPGFRRLHLPGRFITPGFIDNHTHFGQAGAL
                     LLGVNLLDVAEEGSLVKRVREARDRVSAGAWLVGGDWGAYEAWAQGSTGRDSGAAARP
                     PFNPTRSAIDSVTPRTAALLSKWDRSAFLANGRALELAGASCDWPGVECQNGRMTGRL
                     SSDAATRVRAAMPPRSMEQKLAEARVALDQLRSFGVTTIHDNTSPDQLEVYQELRRRG
                     ELTVRIYARPTLDRVEALRAQGIGPGFGDDLIRLGGLKGFVDGIMGNSSARFYQPYLT
                     SGKLGDWRPMMSPPGNMERLLLIADSAGWWPQVHAIGDHAIDTLLTMYERVFAAHGPK
                     PRRWRVIHTQVISGPEVAARMKRLGVIAEVQPFHAIDDMRWMEQRIGARSRWAYAFRT
                     LEQAGVMLSFGSDWPGTNAAWYTADPIVGMYAATTRQTLDGKPEGGWYPEERVSLETA
                     LRAYTSNNAYAEGANDKGRILPGVLADLAVWDADPFAGPVSGLKDRKVVVTILGGRIV
                     YQRH"
     gene            complement(6810..8030)
                     /locus_tag="VGA78_09115"
     CDS             complement(6810..8030)
                     /locus_tag="VGA78_09115"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX9894075.1"
                     /translation="MLLLLALLAQTSADTTRARAIHDRVMTLDTHVDISPANFTREQN
                     YTTRLPTQVDLVKMEAGGLDAVFLIVFVGQSAELTPEGFARAHTVALEKFAAIHRLTD
                     SIAPTRIGLARTAAEARRIHASGRKVALIGVENGYPIGTDLTRVRKFAELGARYLSLA
                     HNGHNHLSDSNTGERDGTWPNGGLSPLGRDLIGELNRWGIMVDVSHPSKASMMQTLEI
                     TRSPIIASHSAVRALCNHSRNLDDEQLLGLKRNGGVAQIVAFSSYVRCGEDSPERQQA
                     VAALRQRYGLGGQGRGFQGLGDSLRAAFQRDMQELNRQFPPPPRATVKEFVDHIDYAV
                     KLIGIDHVGISSDFDGGGGVEGWNNAEETFNVTLELVRRGYTEPQIEKLWSGNLLRVM
                     EENEKVARRLRGVS"
     gene            complement(8289..8948)
                     /locus_tag="VGA78_09120"
     CDS             complement(8289..8948)
                     /locus_tag="VGA78_09120"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HEX9894076.1"
                     /translation="MRKALFLATGFVSALALPGRVTAQDTVVTRVQQEQYVEAKPGPR
                     TSFGIKGGLTFATLSETNASPNFGNQTGFAAGIHLALPLGTSILMFQPEAMISQQGAT
                     AAIGGLPSEDGAFEFTYLTIPANLRVNLATGGAQPYIIGGPYAAFRLNCQFQDVDFDC
                     DNYRDTDWGVNVGAGLKFGRTGGFFLEGRYAFGLTNINDLDEGFDSKNRAFMVLAGIS
                     F"
     gene            complement(9058..9645)
                     /locus_tag="VGA78_09125"
     CDS             complement(9058..9645)
                     /locus_tag="VGA78_09125"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HEX9894077.1"
                     /translation="MRKTLLLVGGLAFAAALSSEAGAQTFGVKGGLSFPTLSDNGQLP
                     VFKRQTRFAVGVHMVLPSDPGSMLMFQPELLYSRQGALASNQVGETEFDLSYVRLTPN
                     LRLTVPLGGVQPYFLGGPYAAWRASCEMAPVSNCNEISRTDWGLDLGAGIRFGGKTGF
                     FVEGRYAFGLQDITDRDAGFNSKNRVALALVGVSF"
     gene            complement(9761..10528)
                     /locus_tag="VGA78_09130"
     CDS             complement(9761..10528)
                     /locus_tag="VGA78_09130"
                     /inference="COORDINATES: protein motif:HMM:NF001753.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HEX9894078.1"
                     /translation="MATTVIPERLLEPAALLRRAQRVTVLTGAGISAESGIPTFRDAL
                     TGLWASYDPEELATPQAFARQPGLVWDWYAERRARLALAEPNPGHHALVEVERSIPAF
                     TLITQNVDGLHRLAGNRCVLELHGNIRRVRCSREGTLIERWNDREQTPPLCPACGAML
                     RPDVVWFGELLPADLLREAWQSAETCDLFLSVGTSNLVEPAASLPWLAHRHGAAVIVV
                     NTTMEGQHSGDRIHHLVGPAGRLLPALVQAAWSVSQA"
     gene            complement(10513..11031)
                     /locus_tag="VGA78_09135"
     CDS             complement(10513..11031)
                     /locus_tag="VGA78_09135"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF664 domain-containing protein"
                     /protein_id="HEX9894079.1"
                     /translation="MLAETFLEESRRFLRGDYLPKILICLEILPPADLWWRANAASNS
                     VGNLVLHLAGNARQWLVHGVGGAPDVRRRQAEFDRREGIPAAELATLLRDTLFEADAV
                     LARLTPAMLIEPRRIQGLDTTVLGAVYHVVEHFSTHTGQIVLLTKLRTGRDLGFWEAR
                     ADGTVIRRWQPL"
     gene            complement(11021..13057)
                     /locus_tag="VGA78_09140"
     CDS             complement(11021..13057)
                     /locus_tag="VGA78_09140"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9894080.1"
                     /translation="MPATWGLALVSLLGTPAPPPAQDTTRLRQLLAAEDARPGELSGL
                     RPLLDALHSPDTLLIRLAVRGLGRQERADLIDSLAPILASGTPAIRAEAANAIGQSAL
                     RSRTPAARRLLEDRIALESNPYVLGVLLRTLGRLPLATPDERQQTEMLLIRASRAGTG
                     TANPALLEGAAHGFHSLFRRTAENEPPSVDAVERLVELLAVSHPAIVRRLAMAALVAS
                     LRVDSGILLDALQDPDREVRRLALLATVNQAALPGRERVVRRGWRDPDPGVRYEALRA
                     FARHLSPREGCAPLLAALDDQDLHLTLLAIDLLAGCGTTAAPRLAIMARGKLSETGWH
                     APAHALVSLANVAPVAADSLLSGFTAAAVWWARMYAARAAEVSRNLPVLTRLARDRHP
                     NVREAAIDALQRRQGHGADSLYLAALDSPDYQLVRTAARALDSSSSRGVLPALLATLE
                     RITREKREASRDTRAALLAAIGSIGSAREVPALRRYLNDFDAEIAQQAAEQVTRWSGT
                     SARAEPRPLPRGPIPSWGELAAWERATVVVVLQSGGRVVLRLRPYDAPTNVARLVRMT
                     RSRWFPRLTFHRVVPNFVVQGGSPGANEYAGDGPFTRDELGLEVHARGSVGVSTRGRD
                     TGDGQIFINLVDNFRLDHDYTIIADVIEGMDVVDGMLEGAVIERVDIRERPDAG"
     gene            13100..13981
                     /locus_tag="VGA78_09145"
     CDS             13100..13981
                     /locus_tag="VGA78_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HEX9894081.1"
                     /translation="MPELPDVTVYVEALRSRIVGRRLGQLRLLSPFVLRSVEPPVTLV
                     AGRKVEVVERIGKRISIGLEGDWWIVVHLMIAGRFRWLAAGKKPPGRLGLAAFEFEEG
                     TLWLTEAGSKRRASIHVTGSRAGLREFERGGLEPLEIDLASFAERLRSENHTLKRSLT
                     DPRLFSGIGNAYSDEVLHAARLSPLQLSRRLDDDEVERLYHATQATLQLWIDRLRTQA
                     AGGFPEGVTAFRDEMAVHGRYGKPCPECGSPVQRIRYADNETNYCARCQTGGRLLADR
                     AMSRLLKDDWPRSIDEL"
     gene            14013..15035
                     /locus_tag="VGA78_09150"
     CDS             14013..15035
                     /locus_tag="VGA78_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894082.1"
                     /translation="MLFTVGGMLLPASLSAQAPVLTDQSLRSQVRFQAVSPVNPKVVW
                     VSGTGGTWARTQDGGNSWLSGKVPGADSLEFRDVHAAGADTAWLLAAGEGDKSRIYRT
                     TNGGATWSAQFLNTDKRAFFDCLAFWDPRRGLAISDAVEKQFLLLRTEDGGATWNRVT
                     GLPPAAEGEGLFAASGTCLIVLPEGRAWFGTGAARTARIGRSTDYGLTWSIAPTPIVQ
                     NTTSSGVTSVAFFDAQRGLSVGGDLNVTNEATVNVAISEDGGATWARGGALPFPGPAY
                     GAAVVPGRRLTAVAVGPGGAAWTSDGGVSWQLLNRDDSWSVGFAADGTGWMVGPRGRI
                     VRVEFK"
     gene            15140..15628
                     /locus_tag="VGA78_09155"
     CDS             15140..15628
                     /locus_tag="VGA78_09155"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9894083.1"
                     /translation="MSVTVYHLELTERSAFTPSRQAARYRLEQVTAPSADFLRFLYSA
                     TGSNWHWVDRAPWTDQRWLARQAEAGVEIWVAREGGAPLGYFELAWQEPSTVEIVYFG
                     LLPHAVGTGQGGVLLGAAINRAWEMGASRVYVNTCTLDHPKALANYQGRGFRVFREEL
                     RS"
     gene            complement(15650..16411)
                     /locus_tag="VGA78_09160"
     CDS             complement(15650..16411)
                     /locus_tag="VGA78_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9894084.1"
                     /translation="MSIPIENGRVTSQIVDGVATLSFFHPKGNSLPGSLLARLAEEIT
                     DLGHNPSASVIVLRSEGAGPFCGGASFQELQAITNAAQGKQFFMGFARLILAMTRCPR
                     FIIARVHGKAVGGGVGVCAAADYAFAVPSASVKLSELAVGIGPFVVGPVIERKIGLSA
                     FSSLAVNAMEWRVAEWAREHGLFAEVRDTVEEMDQAIAELASRLAGSNPDAMARMKRI
                     FWAGTEHWDRLLEERAEMSGTLVLSEFARRAIAGR"
     gene            16600..17565
                     /gene="paaA"
                     /locus_tag="VGA78_09165"
     CDS             16600..17565
                     /gene="paaA"
                     /locus_tag="VGA78_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaA"
                     /protein_id="HEX9894085.1"
                     /translation="MTTIPAAVPSDDPARVAEFEARIARGETIEPKDWMPERYRKQLI
                     RMMSQHAHSEVVGMLPEGNWITRAPSLRRKITLLSKVQDEAGHGLYIYCGTETLGVDR
                     SELIDQLLSGKAKYSSIFNYPTLTWADMGAIGWLVDGAAIVNQTMLAKASYGPYARAM
                     LRICKEENFHKRQGYEIMATLAAGTPAQKRMAQDALDRWWWPSLMMFGPSDRDSPNSA
                     DLIKWGVKKKTNDELRQRFIDLTVPQAEAIGLTIPDPELRYDADTKHWLSGPIDWDEF
                     HQVITGNGPCNRERLAARQAAHRNGAWVREAAETYAAKQAARSAA"
     gene            17640..17906
                     /gene="paaB"
                     /locus_tag="VGA78_09170"
     CDS             17640..17906
                     /gene="paaB"
                     /locus_tag="VGA78_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003857353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaB"
                     /protein_id="HEX9894086.1"
                     /translation="MWEVFTQPPGGAPHEHAGSVHAPDAEIALQNARDAYTRRGEAVS
                     IWVVPSAAIVASSPSDAGPFFDPGNDKPYRHPQFYKVPRGVKVF"
     gene            17906..18688
                     /gene="paaC"
                     /locus_tag="VGA78_09175"
     CDS             17906..18688
                     /gene="paaC"
                     /locus_tag="VGA78_09175"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HEX9894087.1"
                     /translation="MGGRSGGQAGGDSPLFEYLLRLGDDRLVLGHRLSEWCGHGPILE
                     EDIALANIALDSLGQASLFLRRAGQLEGKGRDEDALAYWRDEREFRNLQILELPSGDF
                     AFTIIRLFLFSALGQLQLERLAASPDAELSGIAGKAVKEARYHLRHGAEWVLRLGDGT
                     DESHRRAQSALDELWPWTGELFFQNQVDRALRDQNLIPDLEALRASWETLVKDHLSRA
                     TLAVPSGPPRMTGGRVGRHTEHLGHLLAKMQIVARSHPGAQW"
     gene            18682..19251
                     /gene="paaD"
                     /locus_tag="VGA78_09180"
     CDS             18682..19251
                     /gene="paaD"
                     /locus_tag="VGA78_09180"
                     /inference="COORDINATES: protein motif:HMM:TIGR02159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HEX9894088.1"
                     /translation="MVTHGRTDGPTDRPAGGRAGGRSGGQVLPTADAVLDLLDSVKDP
                     EVPVLSVVELGVVRGAEVDGDRVTVTITPTYSGCPALQMMEQEITGALERAGFREVVV
                     KTVYAPAWTTDWIPESAREKLRAYGIAPPGAVTSDPMVPLGATVRSASCPYCGSANTS
                     RQSEFGSTACKSLHVCHSCRQPFEHFKSF"
     gene            complement(19238..19744)
                     /locus_tag="VGA78_09185"
     CDS             complement(19238..19744)
                     /locus_tag="VGA78_09185"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX9894089.1"
                     /translation="MTLWMEIPSPVGPLRLTSEGAGLTGVYLSPDRYAPREFSESARG
                     ESPVLIEAARQLDGYFAGQRQAFELPLAPAGTEFQHRVWTGLLRIPYGQTISYLELAR
                     RLGDERAVRAVGAANGRNPVSIIIPCHRVVGSNGSLVGYGGGLERKRWLLRHEVSHAA
                     LDFSIRTT"
     gene            complement(19749..20888)
                     /locus_tag="VGA78_09190"
     CDS             complement(19749..20888)
                     /locus_tag="VGA78_09190"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX9894090.1"
                     /translation="MNIDILLPSDQSEGTTNTVGQWFKSVGDRVELNDPLLEIVTDKV
                     TVEIAAPSPGVLTEVLKPEGETVEPGEVLGRIEADTAVRAVETVGLSQPIAPAAAPPA
                     PEDLSPAVRRLLKEHGLSPVEIQGTGKGGRITVQDVEARLADQSVRPSGRPSVRRVPH
                     SAMRKSIAEHMVRSMSTAPHVTSVFEADLSAVLGHREANKAAFEAEGARLTLTAYFVR
                     ATVEAVRAVPEANSRWHDDGLEIWDDVNLGIAAALGSGGLIVPVLRGAHTLDLAAIAR
                     GLQDLTDRARNGALTPGDVQGGTLTISNHGVSGSLLATPIVINQPQSAILGVGKLQQR
                     PVVVNGQVAVRPMVYVTLTIDHRVLDGFAANGFLSRWVETIEQWS"
     gene            complement(21026..>22338)
                     /locus_tag="VGA78_09195"
     CDS             complement(21026..>22338)
                     /locus_tag="VGA78_09195"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9894091.1"
                     /translation="SGHSGQDTQTYKPAALLEQERASDPLPKLYAFLRDGRLGDDEVA
                     AVESQARADVAAALDRALARPEPDRSRVTRYRSTERDAKGQPELQQRGGLAVEGHRFP
                     ASSETPRPEGARINLLTAVRRTLEFELKTNPKLLVFGEDVGPKGGVHAATLGLQEAFG
                     DQRVFDTSLSEEGIIGRSVGLALCGLMPVPEIQFRKYADPATEQLNNCGSLRWRTANR
                     WAAPMVVRLPGGYAPKCGDPWHSVCGEVMWAHATGWQVAIPSNAEDAVGLLRTALRGN
                     EPTIFFEHRALLDGTWSRRPYPGDEYVVPFGRARTILQGDRLTVVTWGAMVERCEAAA
                     RQSGQAVDLLDLRTIAPWDREAVLASVKRTRRCLIVHEETLTAGFGAEVAAVLAEAAF
                     LHLDAPIRRLAIPDVPTPYNVGLMNAILPQVDDIAATITKLVEF"
BASE COUNT         3782 a         7418 c         7619 g         3519 t
ORIGIN      
        1 ttggcgaact ggggaccgac gctgtcggat tggttctccc gacagccgag gagagtcagg
       61 acggcgacca aaagccggac accgccccgt cggcagttgg gaagcggcat tggtgcacct
      121 caacacgcta tgggttctgg cgatgtagga accgggtgcc cggaagaacc acgagggtca
      181 gcagtaccga tcctacaatt gtgtcaagcg cgtgctgcaa tcaggaaccc ggctagcagg
      241 ctctatgcga catgttacca tccgaattca ggtcgcgcga ggggtgcgat tatcggtccg
      301 tcatcaccac agaagcttca acgctacgat cacgacggcg ttcaggtcgc ttgagagctc
      361 ttcgtcgagg gggagtctca gtcccaccgc cggaatcacg cgatcaaacc ggtaggccag
      421 gtcgaatgcc acctgatgag tggcgcggtc ctccgcgtcc tcctcggtca ccaggagtcg
      481 gcccgtgaat cccacgccga gaatcgcgcg ttgacgatcg tatcctactc ggaagccgta
      541 atgagccagg acttccgtgt cacccgcggc gtcgccgctg gggatccacc ctgaagctcc
      601 caggcgcaca ccgatggtca ggccagagct ttcgtggtgt cgatagccca gtgtggtcgt
      661 gatcgaaacc acatccagta tgaacgcctc ggcccgatcg aagtccgtga acagaccgac
      721 gaaccgggcg gaggcctcgt cttcggaggc aaccggcagc cggccaccga cctgaccgta
      781 ccacccggtg gagctggcac cgaagtcgag gccgatgtac gggttgccca ccagtgagcc
      841 ggacaacgac gattcactgg ggctgaaacg ggcgatggga aggctgaaac tgagccggtg
      901 ccgttgcccc agcgaaatcg ccaaggccgc ctcagcgatg ccgttggcga ggtcgacctc
      961 gacgtcatca aacgaggatc gcatggcttc cagacggaag tagttccgct cgcccatgat
     1021 cggccagatt tcctgtgcct ccattgtcgg cgcggccaga agggcgagga ccgtcgctgt
     1081 catgattcgg ctgatacggt gagggattag cagctgcatg gagttctccc gggttgatga
     1141 gccagctcct agaactctag ttgacagcgt ggccggtggt ttccgaggca tggctctgga
     1201 gatgacgccg attcgtgggg cactccgccc ggaggacagg gaagcttcat cgggcgttca
     1261 cccttgccac aggcacggat tgataggttc ggcctactcc cacaggaggg gctgatgaac
     1321 ggacgcacga ttcggggcgc cggcctggcc gcgctgctgc tgcttgccgc ctgcggcggc
     1381 gatgatgacg gggccggccc gagtccctcg ggcctgaccg ggacctggcg ggcgaccaaa
     1441 gtcgagctgg tgaacgtggc caaccccacg gagaaagtcg agctggtggc gctgggaatg
     1501 gtgctcacgg cggagttgaa cgccaacgag acctgccgga taacgagtac cttccccggg
     1561 cagccggaag aggtgatcac cggaacctgg tccagttcca gcgaggtgtt caccatccgg
     1621 cacagcgagg gcgggaatac catcacctgg cagttcgact ggaacctgag cggcaatacc
     1681 ctcacgctca gcggagccga caacgagctc gattttgacg gtgacgacct gggcgatccc
     1741 gccaaactga acctggtgct ggtgcggcag tagggaacgg caccgaccat tcggcgattc
     1801 agcgatttga cggtttagcg attcaatact cgggtgcgca atcgctgaat cgttaagtcg
     1861 gcaaaccgct aaatcaccca atggtcattc ccgcagcacg atcccaggtt ccaccttcgc
     1921 cgcccgcctg gccggcgcca ggcagccgac gacccccgcg agcagcagca cgacggccgc
     1981 cgcgccgagc gccagcggat cggcggcctt gacctggtag aagagattgg ctgcgagccg
     2041 ccccgccagg accgcggcga cgaggcccag gcccagcccg gccagcaccg gccgcaggcc
     2101 ccgccagagg gtctgccgga ctacccgcgc actcccggcg cctaacgcca atcggacccc
     2161 gatctcgcgc cgccgctcgg ccaccaggaa cgcgatcacc ccgtagatcc ccaccgcggc
     2221 gagaaccaag gccagcccgc cgaacagggt gaggagcgcc gacaggaaac ggggctggcg
     2281 caagctgccg gccaccacct cggtgagcgg ccgcaggttt cccaggggaa tctcgcggtc
     2341 aagggcgcgc agcgcggcgc gaatgcccgc cagcaccggg gcggggtcgc ccgccactcg
     2401 cacgacgtag ctcggccccc gggtgacgtc ctgggtcagg ggatagtaga cctccggttc
     2461 gggcggcagc tgcacgttgc gccgccggat attggccacc actcctacga cctcgaccca
     2521 cggtgcgttc ggatcgggcc ccatccgagc ccgctttccg atgggatgct gtcccggcca
     2581 gtggcggtca gccagcgcct gattcaccac caccaccggg ggcgcgtcca tccggtcacg
     2641 ggcatccatc agccggccgc ggagcagcgg gatgcccatc acccggaagt agtccggata
     2701 ggcggcgttg tagccgaccg ccggagcagg accgggcggg agtatcaccc cttccggtac
     2761 gatgctggtg gtgctcacgt tcagcatcgg tgcgctgtac gccgctgagg cgctcgccac
     2821 gcccggcagc gagcgaagcc gctccagaaa atcggcttga aaggcgagga tctgcggtgc
     2881 ttccgggtat cgggccggga ccgccggcgc cgaaaacacc cagaccgact cggtctcgaa
     2941 gcccaactcc tggtcgagca gggtcgagag gctcctgagc gccagggccg atccgacgat
     3001 cagcaccgcc gccagtccca cctgcaccgt gaccagcagg gaccggaggc gatgactctg
     3061 gcgtgagagc gtgctgccgt ggctgccggc cttgagggcg tcactgaagt cggcccgggc
     3121 cgcgtgaaat gcgggcaaca accccgatgc cagcgccgcg accagtgtca gcatcagggc
     3181 gaacaccagg acccgcccgt cggtgcggac cagctcggcc cgcggcatgg attgacccag
     3241 cagcccgacg aacgccgcgc tagtccatga ggcggcgagc accccgatga caccgccaaa
     3301 cccggccagc agcagctgct cgatcatcac ctgccgcacc agacgccaac ggcccgcccc
     3361 cagggccgag cggaccgcca gctcccggct ccggctcagg gtgcgcgcga agaccagatt
     3421 ggccaggttg gcgcaggcga tcagcagcac cagtcccacc gctcccatca ccagccagag
     3481 caccggacgg acggttgaga taccggcctc ctggagcggg atcatctggg ggagatgtcc
     3541 tttattcatc tcgcgatggt ccgtctccag ccgccggccg acggtcagca actcctcatt
     3601 ggcgcgctcg aactcgatcc cctcgcggat ccggccgaag ccggccagga agtgcatccg
     3661 gcgggctcgg gcctggtcac tggccaccgc ctcgaagtca gagggtgtcc agacatcgag
     3721 gggctcgccg aggggattca cgaactcgcg cggcagcacc ccgatgactt cggcttcctc
     3781 gttgttgagc cggatggccc ggcctacgat gctgctgtcg gcgccgaaca gacggaccca
     3841 ggcgccgtgg ctcaggatgg ccactcccgg cgcgccggat gcgccttctt cattccggaa
     3901 ggcacggccg atgaagggcc ggatgcccag aatgtcgaaa aacgccgggg acacctgccc
     3961 acccatcagc gactgtgcct cgccggtgcc ggtcagggta aagaaccgat accgaaaggc
     4021 ggccagtccc tcgaacgtgg tggtctggct ctgccaatcg cggaagtccg cgatggtgat
     4081 ctggccgaag gggcggtcct ctttggtgtc gtgctcgtag atccgcacca gccggtcgag
     4141 cccggggaag ggcagcggtc gaatcacgac cgcgtccagc agcgagaaga ccgccgcgtt
     4201 ggcaccgatg ccgagggcga acgtgatcga cgcgaccaga gcgtagagcg gtgtgcgccg
     4261 cgctccccgg agcgagatcc gcagatcctg catcaccccg ctccaccact cccgccggcc
     4321 ggtgccggct tggatcctcg catcgatgtc cccgacctcg gcggcgaccc gctcgggcga
     4381 gccgaactgc cccatcgcgg cgtcccgagc cgccgcgggc gacatcccct gggccaccag
     4441 ctcgtcgatc cgggtctgga ggtggaattc gatctcggac cggatgtcgg gatcggcatc
     4501 ggagcggccc gagtccagcc ggaagacccg gcgcaatcca ggggggagac gcatctcaga
     4561 cctcctcgga agccaggacc ttggcgaccg cgtcgacata gcgctgccag agggagacct
     4621 gggtcttgag ctggcggcgg ccggcggccg tcaggctgta gtagcgggcc ttccggttgt
     4681 tgtcggagta gccccagtcg gcggcgaccc agcggcggga ttccaggcgg tgcagggcgg
     4741 gatagagcgc accctcctcc accagaatgg cgtcgtcggt gcgctgcttg atggcggcgg
     4801 cgatggcata gccgtgcaac gggccggcgg acagggtccg gaggaccagc aggtccaggg
     4861 ttccccggag caggtcgagt tcgggacggg gcaagtctcg ctccctgagg ttcttagggg
     4921 gacgacgggc cgacgccccc taaggtttca aggggtggga tgcggcgagg cgggaaagcg
     4981 ttggaaacct actatcgtca atggcgttgg tagacgatcc tgccgccgag aatggtgacg
     5041 accaccttgc gatccttgag cccgctcacg ggcccggcga acgggtcggc gtcccacacc
     5101 gccagatcag ccagcacgcc cggcaggatt ctgcctttgt cgttcgcccc ctcggcgtag
     5161 gcattgttgc tggtgtaggc ccggagcgcg gtctccaggc tcacccgttc ctcggggtac
     5221 cagccgccct cgggcttgcc gtcgagggtc tgtcgcgtgg tggccgcgta catgccgacg
     5281 atggggtcgg cggtgtacca ggccgcattg gtaccgggcc agtcgctgcc gaaagagagc
     5341 atgaccccgg cctgttccag ggtacggaag gcgtaggccc agcgggagcg ggctccgatc
     5401 cgttgttcca tccagcgcat atcgtcgatg gcgtggaagg gctggacttc ggcgatgacg
     5461 cccagccgct tcatacgagc agccacctcg ggcccgctga ttacctgggt gtggatcacc
     5521 cgccagcgcc gcggtttggg accgtgggcg gcaaagaccc gctcatacat cgtgagcagg
     5581 gtatcgatcg cgtggtcgcc gatggcatgt acctggggcc accaccccgc cgagtcggcg
     5641 atcaggagca agcgttccat gttgccgggc gggctcatca tcgggcgcca gtcacccagc
     5701 ttgccgctgg tgagataggg ctgatagaac cgggcgctgg agttgcccat gatcccgtcg
     5761 acgaatccct tgagcccgcc cagccggatc aggtcgtcac cgaagccggg cccgatgccc
     5821 tgggcccgca gggcttcgac ccggtcgagc gtgggacggg catagatccg gacggtcagt
     5881 tctccgcgac ggcgcagctc ctggtagacc tcgagctggt caggcgaggt attgtcgtgg
     5941 atggtggtga cgccgaagct ccggagctgg tccagtgcga cgcgggcttc ggccagcttc
     6001 tgctccatgg atctgggcgg catggcggcc cgaacccggg tggcggcgtc ggacgacaac
     6061 cggccggtca tccggccgtt ctgacattcg actcccggcc agtcgcagga ggcgccggcc
     6121 agctcgagcg ctcggccgtt ggccaggaag gccgatcgat cccatttcga cagcagcgcc
     6181 gcggtgcgcg gcgtgacgga gtcgatggcc gagcgggtgg gattgaaggg tggcctggcg
     6241 gcggcgccgc tatcgcgacc ggtggacccc tgggcccaag cctcatacgc gccccaatcc
     6301 ccgcccacca gccaggcgcc cgcggacacc cgatcgcggg cctctcgcac ccgtttaacc
     6361 agcgagccct cctccgcgac gtcgagcagg ttgacgccta acagcagggc gccggcctgt
     6421 ccgaaatggg tatggttgtc gatgaagccc ggggtaatga accggccggg caggtggaga
     6481 cggcgaaagc cggggaccgc cagggcgagt atcccgtccg ccgtccccac ggccacaatc
     6541 cggtcgttca ggatggctat cgcgtccgga ttgagggcgc cgtcggtgct ccacaccttc
     6601 gcccccgtga taaccaaatc ggcgaggatg cgggtggagt ccgactgggc cgacgcggga
     6661 gcggcgcaga gcagggcgat cagagtgagg ctcgacgctg gatgcttcac cgtgcaccgt
     6721 tcactgttga ccattcactg ttgaccattc actgttgacc gttcactgct gaccgttcac
     6781 cattacccgc gcgggttaat ggccgatgct tacgacacgc cccgcaggcg ccgtgccacc
     6841 ttctcgttct cctccatcac ccggagcaga ttcccgctcc agagcttctc gatctgcggc
     6901 tcggtgtagc cccggcgcac cagctccagg gtcacgttga aggtctcctc ggcgttgttc
     6961 cacccctcga ccccgccacc gccgtcgaag tcggagctga tgcccacgtg atcgatcccg
     7021 atcagcttga ccgcgtagtc gatgtgatcc acgaattcct tgaccgtggc gcggggcggg
     7081 ggcgggaatt gccggttgag ctcctgcatg tcacgctgga aagcggcgcg gagcgagtcg
     7141 cccaggccct ggaagccgcg tccctggccg ccgagcccat agcgctgccg caacgcggcg
     7201 acggcctgct gccgctcggg cgagtcttcc ccacatctga cgtaactcga gaacgccacg
     7261 atctgggcca cgccgccgtt ccgcttgaga ccgagtagct gctcgtcgtc gaggttgcgg
     7321 gagtggttgc acagggcccg caccgccgag tgggacgcga tgatgggcga ccgggtgatc
     7381 tcgagggtct gcatcatgga tgccttggac ggatgggaga cgtccaccat gatgccccag
     7441 cgattgagct cgccgatcag gtcgcgcccc agcgggctca ggccgccgtt gggccaggtg
     7501 ccgtcgcgtt cgccggtatt ggagtcggaa aggtgattgt gcccgttgtg ggccagcgag
     7561 agatagcgcg cgcccagctc ggcgaacttc cgcaccctgg tgaggtcggt gccgatggga
     7621 tacccgtttt ccacgccgat cagcgccact ttgcgtcccg aggcgtggat ccggcgggcc
     7681 tcggcggcgg ttcgggccag cccgatgcgg gtgggggcga tggagtcggt cagccggtga
     7741 atggcggcga acttctccag ggccacggtg tgggctcggg caaagccttc gggcgtgagc
     7801 tcggccgact gtcccacaaa gacgatcaga aacaccgcat ccagaccccc ggcctccatc
     7861 ttgactagat cgacctgggt cggcagccga gtggtgtagt tctgctcgcg ggtaaagttg
     7921 gccgggctga tgtcgacgtg ggtatcgagg gtcattaccc ggtcgtgaat ggcgcgggcg
     7981 cgggtggtgt cggcggaggt ctgggcgagg agcgcgagga ggaggagcat tgggggtggg
     8041 gttccgggtt ccgagttcca ggtgccgggt gcggtgcacg gtgcggtgct aggtgccagg
     8101 ttctgcgtgc gcctgaaact gcctgctcag gcgtgttccg gctagccccc tgctttgacg
     8161 cggcacgtgc cggcactggg caccgcactt tgaaccgcac ctggaacccg gaacgcggca
     8221 cccggaacca gaaagcaaac gcctccgccc gcgcgaggcg cgggcggagg tgttcggctt
     8281 tctgttccct agaacgaaat gccggcgagc accatgaagg cgcgattctt ggaatcgaaa
     8341 ccttcgtcca gatcgttgat gttcgtcagc ccaaaggcgt agcgcccttc caggaagaac
     8401 cctccggtgc gcccgaactt caacccggcg ccgacgttca ccccccagtc ggtgtcgcgg
     8461 tagttgtcgc agtcgaagtc cacgtcctga aactggcagt tgagccggaa cgccgcgtag
     8521 ggaccgccga tgatataggg ctgggcccca ccggtcgcca ggttgacccg caggttggcc
     8581 ggaatcgtga ggtaggtgaa ctcgaacgcc ccgtcctcgg acgggagccc gccgatcgcg
     8641 gcggtggcgc cctgctgcga gatcatggct tcgggctgga acatcaggat cgacgtcccc
     8701 agcggaagcg ccaggtggat gccggcggcg aagccggtct ggttgccgaa gttaggcgag
     8761 gcgttggttt ccgacagcgt cgcgaacgtc agcccaccct tgatcccgaa tgaggtgcgg
     8821 ggcccgggct tcgcttcgac atactgctcc tgctgcaccc gggtcaccac cgtatcctga
     8881 gcggttaccc ggccaggcag cgccagagca gagacgaaac ccgttgctaa gaacagtgct
     8941 ttgcgcatgc ataacctccg gtacagagat gacacggact aagggcatcc ttcacaggta
     9001 agcggacgcc tcattccggc gtgctctgca cagtctcatg ctagaccccg cccaggatca
     9061 gaatgacacc cccaccagtg cgagtgcgac ccgattcttg gagttgaagc cggcgtcccg
     9121 atcggtgatg tcctgcaggc cgaacgcgta gcggccttcg acgaagaagc cggtcttacc
     9181 cccaaacctg ataccggctc cgagatccag accccagtcg gttcggctga tctcgttgca
     9241 gttgctgacc ggagccattt cgcagctcgc ccgccaggcg gcgtagggac cacccaggaa
     9301 atagggctga accccaccca gcggaacggt aagccgcagg ttgggcgtga gccggacata
     9361 gctcagatcg aactcggtct cacccacctg attggaagcc agggctccct gccggctgta
     9421 cagcaactcc ggctggaaca tcagcatgct gccgggatcc gagggcagca ccatgtggac
     9481 gccaaccgca aatcgggtct ggcgcttgaa caccggaagc tgaccgttgt ccgacaaggt
     9541 cgggaacgac aagcctccct tgacgccgaa ggtctgggca ccggcttcgc tcgacaatgc
     9601 cgccgcgaag gcgaggccgc ccaccagtaa tagcgtcttc cgcattctct cctcccatgc
     9661 tgggaaatga ctgaaacacg agggcaccgt gacgccccgc tgctatgcgg acgccccatg
     9721 ttccacccaa tgcacaccct tcgatgctag gcggccgatg ttaggcttgg gagacggacc
     9781 atgcggcctg caccagcgcc ggcaggagcc ggcccgcggg tcctaccaga tgatggatgc
     9841 ggtccccgga gtgttggccc tccatcgtcg tgttcaccac gatgaccgcg gcgccgtggc
     9901 ggtgagccag ccacggcagc gacgcggccg gctcgaccag gttggaggtg cccaccgaaa
     9961 ggaagagatc gcaggtctcg gccgattgcc atgcctcccg cagcaggtcg gcaggcagca
    10021 actccccaaa ccagaccacg tcgggccgga gcatcgcgcc gcaggcaggg cagaggggcg
    10081 gggtctgttc ccggtcattc cagcgctcga tgagggttcc ttcgcgggag caccgtaccc
    10141 ggcgaatgtt gccgtgcagc tcgagcacgc agcggttgcc cgccagccgg tgcaatccgt
    10201 ccacgttctg ggtgatcagg gtgaaggctg gaatcgaacg ctcgacctcc accagggcgt
    10261 ggtgcccggg gttgggctcc gccagggcca gccgggcgcg ccgttcggcg taccagtccc
    10321 acaccagtcc gggctggcgg gcgaaggcct gcggagtcgc cagctcctcg gggtcgtagc
    10381 tggcccacag tccggtcagc gcatcgcgaa aggtcgggat gccgctctcg gcggaaatcc
    10441 cggcgccggt gagcaccgtg acccgctggg cccgtcgcag cagcgcggca ggctcgagca
    10501 gccgctccgg aatcacagtg gttgccaacg gcggatcacg gtgccgtcgg cgcgcgcctc
    10561 ccagaagccc agatcccggc cggtacgaag cttggtgagc aggacgatct ggccggtgtg
    10621 agtcgagaag tgctcgacca cgtggtagac ggctcccagc accgtggtgt cgagtccctg
    10681 gatccggcgg ggctcgatca gcatcgcagg ggtgagccgt gccagtaccg cgtcggcttc
    10741 gaacagggtg tcacgcaaca gcgtggcgag ctcggccgcc gggatgcctt cgcgacggtc
    10801 gaactcggcc tgccggcggc ggacgtcggg cgccccgccc acgccgtgca ccagccactg
    10861 ccgagcattc cccgcgagat gcagcaccag attgccgacg ctgttggagg ccgcgttggc
    10921 gcgccaccag aggtcggccg ggggaaggat ctcgaggcag atcaggatct tggggaggta
    10981 gtcgccgcgg agaaaacggc gggactcctc gagaaaagtc tcagccagca tcggggcgct
    11041 cccggatgtc gacccgttcg atgacagccc cttccagcat tccgtccacc acgtccatgc
    11101 cctcgatgac atccgcgatg atggtgtagt cgtgatcgag gcggaagttg tcgaccagat
    11161 tgatgaagat ctggccgtcg ccggtatcgc ggccccgggt cgagaccccg accgaaccgc
    11221 gggcgtgaac ctcgagcccc aactcgtcgc gggtgaaggg gccgtcaccg gcatactcgt
    11281 tcgcgccggg gctgccaccc tgcaccacga agttgggaac cacccggtgg aaggtgagtc
    11341 gcgggaacca gcggctccgg gtcatgcgga ccagtcgagc cacgttggtc ggggcgtcat
    11401 agggtcgcag ccgaagcacc acccgcccgc cgctctgcag gaccaccacc acagtcgctc
    11461 gctcccacgc cgcgagctca ccccacgacg ggatcggccc gcgcggcagg ggtcgtggtt
    11521 cggcccgggc gctggtgcct gaccaccggg tcacctgctc cgcggcctgc tgggcgatct
    11581 cggcatcgaa gtcgttgagg tagcgccgca gggccggtac ttccctcgcg ctaccgatgg
    11641 aaccaatggc ggcaagcaga gccgctcggg tgtcgcgcga ggcctcccgt ttctcacggg
    11701 tgatccgctc gagcgtcgcg agcagcgccg ggagcacgcc gcggctggag gagctgtcga
    11761 gggcccgggc cgcggtccga accaactgat aatcggggct gtccagggcg gcgaggtaga
    11821 gggaatcggc gccatgaccc tgccgtcgtt gcagcgcgtc gatcgcggcc tcacgaacgt
    11881 tagggtgccg gtcgcgcgcc agccgcgtca ggaccggcaa gttgcgggag acctcggcgg
    11941 cgcgagcggc gtacatccgg gcccaccaca ccgccgcggc ggtgaaaccg gaaagcaagg
    12001 aatcggccgc caccggggcg acgttcgcca gcgacaccag cgcgtgggcc ggcgcgtgcc
    12061 atcccgtttc gctcagctta ccccgggcca tgattgcgag ccggggcgcg gcggtggtgc
    12121 cgcatcccgc cagcaggtcg atcgccaaca gtgtcaagtg cagatcctga tcatcgagcg
    12181 ccgcgagcag cggagcgcaa ccctcgcgcg gggacaggtg tcgggcgaag gcacgcaggg
    12241 cttcataccg cactcccggg tcggggtcac gccacccccg ccgaactacc cgctcccggc
    12301 ccggaagggc agcctgattg accgtggcca gcagggcgag gcgccgcact tcccggtccg
    12361 ggtcctgtaa cgcatcgagc aggatcccgc tgtccactct gaggctcgcc accaacgcgg
    12421 ccatcgccag ccgccgcaca atggccgggt gactgaccgc cagcagctcg accagacgtt
    12481 ccaccgcatc gaccgagggg ggttcattct ccgcggtccg gcgaaacaac gagtggaacc
    12541 catgggccgc gccttccagc agcgccgggt tcgccgtccc ggtaccggct cgactggcgc
    12601 ggatcagaag catctcggtc tgctggcgtt cgtcgggggt ggccagcggc aatcgcccca
    12661 aggtgcgcag caggactccc agcacgtagg ggttggattc cagcgctatc cgatcctcca
    12721 gcagccgccg ggccgccggg gtgcggctcc gcaatgcgct ctggccgatg gcgttggccg
    12781 cttcggcccg gatggcggga gtgccgctcg cgaggatcgg tgccagcgag tcgatgaggt
    12841 cggcccgttc ctggcggccc agacctcgca ccgcgaggcg aatcagcagc gtgtcaggcg
    12901 aatggagggc atccagcagc ggccgaagtc cgctgagttc cccgggccgg gcgtcctcgg
    12961 cggcgagaag ctgacggagt cgggtggtgt cctgcgccgg cggcggcgcc ggcgtgccga
    13021 gcagcgaaac cagcgcaagt ccccaagtgg cgggcatgcg cgctataatg agcgggctcc
    13081 agcctcggcg ccagcgcctg tgcctgaatt gcccgacgtc acggtctatg tcgaagcgct
    13141 ccgaagccgg atcgtgggcc ggcgcctggg ccagctccga ctcctgagtc cattcgtgct
    13201 gcgttcggtc gagccgcccg tgactctggt ggccggccgg aaggtcgaag tggtggagcg
    13261 gatcggcaag cggatcagca tcggcctgga aggcgattgg tggatcgtgg ttcacttgat
    13321 gatcgcggga cggttccgtt ggctagcggc aggcaagaag cctccgggcc ggttgggact
    13381 ggcggccttc gagttcgagg agggaaccct ctggctcacg gaagcaggca gcaagcgtcg
    13441 cgcctcgatt catgtgacgg gaagccgggc cggcctgcga gaattcgagc gcgggggtct
    13501 ggagccgctg gagatcgacc tggcgagctt cgccgagcgg ctccggagcg aaaaccacac
    13561 cctcaagcga tccctgaccg acccgcggct cttcagcggc atcggcaacg cgtattccga
    13621 tgaggttctg cacgcggcgc gcctgtcgcc gctgcagctc tcacgccgct tggacgacga
    13681 cgaggtcgag cggctgtacc atgccactca ggcgaccctc cagttgtgga tcgaccggct
    13741 gcggacccag gcggcgggcg gattccccga gggtgtgacg gcgtttcgag atgagatggc
    13801 ggtccatgga cggtacggca agccgtgccc cgagtgcggc agtccggttc agcggatccg
    13861 ttacgccgac aacgagacga attactgcgc cagatgccag accggcgggc ggttgctggc
    13921 cgatcgggcg atgtctcgtt tgctcaaaga cgattggccc aggagtatcg atgagctcta
    13981 gtcgcgaaac acgggtcgcg agtcgcggga ccgtgctttt caccgtcggg ggaatgttgc
    14041 tcccggcgtc cctgtcggct caggcgccgg ttctcaccga ccagtccctt cgcagccagg
    14101 tccggttcca ggcagtgagt ccggtcaacc cgaaggtcgt gtgggtgagc ggaaccggcg
    14161 gcacctgggc acggacccag gacggcggaa acagctggct gtcaggcaag gtgccggggg
    14221 ccgactcgct ggaattccgg gacgtgcacg ccgccggcgc ggacaccgcc tggctcctgg
    14281 cggccggaga aggagacaag tcccgcatct atcgcaccac caacggcggg gcgacgtggt
    14341 ccgctcagtt cctcaacacg gacaagcggg ccttcttcga ttgtctggcg ttctgggatc
    14401 cgcggcgcgg tctcgcgatc agcgacgcgg tcgagaagca gttcctgctg ctccgaaccg
    14461 aggacggcgg ggccacctgg aaccgggtga ccggtctgcc gccggcggct gagggggagg
    14521 gactctttgc cgccagcggg acctgtctca tcgtgctgcc cgaggggcgc gcctggttcg
    14581 gtaccggcgc cgcccggacc gcccggatcg gacgcagcac cgactacggg ctgacctggt
    14641 ccatcgcgcc gaccccgatc gtgcagaata ccacttcatc cggcgtgacc tcggtggcgt
    14701 tcttcgatgc ccagcgcggg ctcagcgtcg ggggcgacct gaacgtgacc aatgaggcga
    14761 ccgtcaacgt ggcgatcagt gaggacggcg gagcgacctg ggctcgcggc ggcgccctgc
    14821 cgtttcccgg cccggcctat ggtgccgccg tcgtcccggg ccggcggctg acggcggtgg
    14881 cggtgggacc cgggggtgcg gcctggacca gcgatggcgg cgtcagctgg cagctcctca
    14941 accgggatga ctcatggagc gtgggattcg ccgcggacgg gacggggtgg atggtggggc
    15001 cgagggggcg cattgtgcgg gtcgagttca agtaatccat tgacgattga cgattgacga
    15061 ttgacaattg cgtccgccgg atcagcgacc tcgcgggccg ccggtgtcaa tcgccgttca
    15121 ccaatctccg attcatacaa tgtcagtcac tgtctatcat ctggagctga ccgagcgctc
    15181 ggcgttcacg cccagccgcc aggccgcccg ctaccggctg gagcaggtga ccgcgccttc
    15241 ggccgacttc ctgcgctttc tctacagcgc gaccggatcg aactggcact gggtcgaccg
    15301 ggcaccgtgg accgatcagc gctggctggc gcgacaggcg gaggccgggg tcgagatctg
    15361 ggtggcccgt gaaggcggtg cgcctctggg gtatttcgag ctggcgtggc aggagccctc
    15421 tacggtggag atcgtgtatt tcggcctgct gccgcatgcg gtgggcaccg gccagggtgg
    15481 ggtgctctta ggggccgcga tcaaccgggc ctgggagatg ggagccagcc gagtctacgt
    15541 caacacctgc acgctcgatc acccgaaggc gctggccaac taccagggga gggggttcag
    15601 ggtgtttcgg gaagaattgc ggagctgaat cgctcaatcg ctggatggct caccgtccgg
    15661 cgatcgccct ccgggcaaac tccgacagca ccagggtgcc gctcatctcg gcccgttctt
    15721 ccagcaaccg gtcccagtgc tcggtgccgg cccagaagat ccgcttcatc cgcgccatag
    15781 cgtccggatt gctaccggcc agacgactgg ccagctcggc gatggcctga tccatctctt
    15841 ccacggtatc ccgcacttcg gcgaagagcc cgtgctcccg ggcccactcc gcgacccgcc
    15901 attccatcgc gttgaccgcc aggctgctga acgcggagag gccgatcttg cgttcgatca
    15961 ccggccccac cacgaaggga ccgatcccca ccgccagctc gctcagtttc accgacgcgc
    16021 tcggcaccgc gaaggcgtag tccgccgcgg cgcagacccc gacaccgccc cccaccgcct
    16081 tgccgtgcac ccgcgcgatg atgaaccggg gacagcgggt catcgccagg atgagccggg
    16141 cgaatcccat gaagaactgc ttgccctggg cggcattggt gatggcctgc aattcctgga
    16201 aactggcacc accgcagaat gggccggccc cttcactgcg cagcacgatg acggaggccg
    16261 acgggttatg tcccagatcg gtgatctcct cggccagtct ggcgagaagg gagccgggga
    16321 gcgagttccc cttaggatgg aaaaaactga gggtggcgac gccgtctaca atctgggagg
    16381 tgacgcgacc gttttcgatg gggatgctca tgcctcaagt atatggaaca gcgacagcat
    16441 tgacgattga caattgacga ttgacaattg ctcgctgagg cagcggcccc cccgaagcaa
    16501 ctgtcaatgg tcaattgtca agcgtcatga aaacacctaa gccattgaaa aatctgcgtt
    16561 tccggtgttt ttttagaggc taggaaggag tcgaggatca tgacgacaat acctgccgcc
    16621 gttccctccg acgatcccgc ccgggtggcc gagttcgaag cccgcatcgc ccggggcgag
    16681 accatcgagc ccaaggattg gatgccggag cgctaccgca aacagctgat ccggatgatg
    16741 tcgcagcatg cccattccga agtggtgggg atgctgcccg aggggaactg gatcacccgg
    16801 gcgccctcgc tccggcgcaa gatcacgctg ctctccaagg tccaggacga agccggccac
    16861 ggcctctata tctactgcgg cactgaaacc ctcggggtgg accggagcga gctgatcgat
    16921 cagctgctca gcggcaaggc caagtactcc agcatcttca actaccccac gctcacctgg
    16981 gccgatatgg gcgccatcgg ctggctggtg gacggcgcgg cgatcgtgaa ccagaccatg
    17041 ctggccaagg cctcgtacgg tccctacgcc cgcgccatgc tccggatctg caaggaagag
    17101 aacttccaca agcggcaggg ctacgagatc atggccaccc tcgcggccgg caccccggcc
    17161 cagaaacgga tggcccagga cgcgctcgac cgctggtggt ggccctcgct catgatgttc
    17221 ggtcccagcg accgggattc gcctaacagc gccgacctga tcaagtgggg cgtcaagaag
    17281 aagaccaacg acgagttgcg gcagcggttc atcgacctga ccgttccgca ggcggaagcc
    17341 atcgggctca ccatccccga ccccgagctg cggtacgacg ccgacaccaa gcactggctc
    17401 agcgggccga tcgactggga cgagtttcac caggtgatca ccggcaacgg gccctgcaac
    17461 cgggagcgcc tggccgcgcg ccaggcggcc caccggaacg gcgcctgggt tcgggaagcg
    17521 gcggagacgt acgccgccaa gcaggcggcc cggagcgcgg cgtgacgacg gacggccgga
    17581 cgggcgggcg gaccgacgga ccgacggacc gaccgaccga ctccgttggt gaatggccct
    17641 tgtgggaggt gttcacccaa ccccccgggg gggcacccca cgagcatgcc ggcagcgtcc
    17701 acgcgcccga cgcggaaatc gcgctccaga atgcgcgcga cgcgtatacc cggcggggcg
    17761 aagcggtgag catctgggtg gtgccctcgg cggcgatcgt ggcgtcgagc ccgtccgatg
    17821 ccggtccctt cttcgatccc ggcaacgaca agccataccg gcaccctcag ttctataagg
    17881 tccctcgcgg agtgaaggtc ttctgatggg cgggcggtcg ggcgggcagg cgggcggaga
    17941 ctccccgctt ttcgagtacc tgctgcggtt gggcgatgac cggctggtgc tggggcatcg
    18001 tctgtcggag tggtgcggac acgggccgat tctcgaggaa gacatcgcgc tggccaacat
    18061 cgcgctcgac agtctcggtc aagcgagtct ttttcttcgc cgggcggggc agctcgaagg
    18121 caagggccgg gacgaagacg cgctggcgta ctggcgcgac gagcgggagt tccggaacct
    18181 ccagattctg gagctgccgt ccggcgattt cgccttcacc attatccggc tgttcctctt
    18241 cagcgctctg ggtcagctgc agctcgagcg gctcgcggcg tcgcccgatg ccgagctgag
    18301 cggtatcgcg gggaaggcgg tgaaggaggc gcgctaccat ctgcgccacg gcgcggaatg
    18361 ggtgcttcgc ctgggggacg ggaccgacga gagccaccgg cgggctcagt cggcgctgga
    18421 tgaactctgg ccctggaccg gcgagctctt cttccagaac caggttgacc gggccttacg
    18481 ggatcagaat ctgattcccg acctggaggc tttgcgggcc tcctgggaga cgctggtgaa
    18541 ggaccatctc tcccgggcca cgctcgccgt tccgtccggg ccgccccgta tgacgggcgg
    18601 gcgggtggga cgtcataccg agcacctggg ccacctcctg gccaagatgc agatcgtggc
    18661 gcgcagccat ccgggggcgc aatggtgacg cacggacgga cggacggacc gacggaccga
    18721 ccggcgggcg ggcgggcggg cgggcggtca ggcggtcagg tcctgccaac ggccgatgcg
    18781 gtactggacc tgctggactc cgtcaaggac cccgaggtgc cggtgctatc ggtggtggag
    18841 ttgggggtcg tgcggggagc cgaagtcgac ggcgaccgcg tgaccgtgac gatcacaccg
    18901 acctacagcg gctgcccggc gttgcagatg atggaacagg agatcaccgg ggcgctggag
    18961 cgggccgggt tccgggaagt ggtggtgaaa accgtctacg cgcccgcgtg gaccaccgac
    19021 tggattccgg agtcggccag ggagaagctc cgcgcctacg gcatcgctcc gcctggagcg
    19081 gtcacctcgg acccgatggt gccgctgggt gccacggtgc ggagcgccag ctgcccctac
    19141 tgcggctccg ccaacaccag ccgacagagc gagttcggct caaccgcctg caagtcgctg
    19201 cacgtctgcc actcctgccg ccagcccttc gagcacttca agtcgttctg atcgagaagt
    19261 cgagcgccgc gtgggagact tcatggcgga gcagccagcg cttccgctcc aggccgcccc
    19321 cgtagccgac cagcgagcca ttggacccga ccacccgatg acagggaatg atgatggaga
    19381 cgggattgcg tccgttggcg gcgcccacgg cacggaccgc gcgctcgtcg cccagccggc
    19441 gagccagctc gagatagctg atggtctggc cgtacgggat ccggagcagg ccggtccaga
    19501 ctcggtgctg gaattcggtg cccgccggag cgagcgggag ctcgaacgcc tgtcgctggc
    19561 cggcgaaata cccgtcgagc tggcgtgccg cctcgatcag aaccggactc tcgcctcggg
    19621 ccgattcgga gaattctctc ggggcgtagc ggtcgggcga caggtagacg ccggtgagcc
    19681 cggccccttc actggtcagc cgcaatggtc cgaccggact cggaatctcc atccacaggg
    19741 tcacggattc agctccactg ctcgatggtc tcgacccatc gggacaggaa cccattggcc
    19801 gcgaacccgt cgagcacccg gtgatcgatg gtcaaggtga cgtagaccat cggccggacc
    19861 gccacctggc cgttcacgac cacaggccgc tgctgcaatt tgccaacgcc gagaatggcg
    19921 gactggggct ggttgatcac gatcggggtc gccagcaggc tcccgctcac gccgtggttg
    19981 gagatggtga gggtcccgcc ctgcacgtcg ccgggcgtga gcgcgccatt ccgggcccga
    20041 tcggtcaggt cctggagacc ccgcgcgatg gccgcgaggt ccagggtgtg ggcccctcga
    20101 agcaccggta cgatcaggcc gcccgagccc agcgcggccg cgattcccag gttcacgtcg
    20161 tcccagattt ccagcccgtc gtcgtgccag cggctgttgg cctcgggcac ggcccgaacg
    20221 gcctcgaccg tggcccggac gaaataagcg gtgagcgtga gccgggcacc ttcggcctcg
    20281 aacgccgcct tgttggcctc ccgatgcccc agcaccgcgc tcaagtcggc ctcgaacacc
    20341 gaggtaacgt gcggcgctgt gctcatgctc cgtaccatgt gctccgcgat gctctttcgc
    20401 atggcggaat ggggcactct tcggacggac ggacggcccg acggacggac ggactgatct
    20461 gccaaacgag cttctacatc ctgaaccgtg atccttccgc ctttaccggt gccctgaatc
    20521 tccaccgggc tcaacccgtg ctccttgagc agccgtctaa ccgccgggct caggtcttcc
    20581 ggagccggag gggcggcggc aggagcgatc ggttgggaca aaccaaccgt ctcaaccgcc
    20641 ctgaccgccg tatccgcctc gatccgtccc aggacctcac ccggctccac cgtctcgcct
    20701 tcgggcttga gaacctcggt caggactccg ggcgaaggag cggcgatttc gaccgtgacc
    20761 ttgtcggtga cgatctccag cagcggatcg ttcagctcga cccggtcacc caccgacttg
    20821 aaccactggc ccacggtgtt ggtggtgcct tcgctctggt cgctgggcag gaggatgtcg
    20881 atgttcactg ggttccgttc acgttgctcg tatgccgttt cccgtcatcc tgagcgaagc
    20941 gaaggatctg cttcgaggga gattcttcgc tgcgctcaga atgacggtgc tgccgttcac
    21001 cgttcaccgt tcaccgttca ccggttcaga actccaccag cttggtgatt gtcgccgcga
    21061 tgtcgtccac ctggggcagg atcgcgttca tcaggccgac gttgtacggc gtcggcacgt
    21121 cggggatggc caggcgccgg atgggcgcgt cgaggtggag gaacgccgcc tcggccagta
    21181 cggccgccac ctcggccccg aacccggcgg tgagcgtctc ctcgtgcacg atcaagcagc
    21241 gccgagtccg tttgaccgag gcgagcaccg cctcgcgatc ccagggcgcg atggttcgca
    21301 ggtccagcag atccacggcc tggccacttt gccgggccgc ggcctcacac cgctccacca
    21361 tggcgcccca cgtgaccacg gtcagccgat caccctggag gatggtccgg gcccgtccga
    21421 agggcacgac atactcgtca cccggatagg gccggcgcga ccaggtgccg tcgagcaggg
    21481 cgcggtgttc gaagaagatg gtcggctcgt tgcccctgag tgccgtccgg agcaggccga
    21541 ccgcgtcctc ggcgttcgat gggatggcaa cctgccagcc ggtggcgtgg gcccacatca
    21601 cctcgccaca tacgctgtgc cagggatcgc cgcacttggg cgcgtagcca ccggggaggc
    21661 gcaccaccat gggcgcggcc cagcgattcg cggtgcgcca gcggagcgaa ccgcagttgt
    21721 tgagctgctc cgtggccggg tcggcatact tccggaactg gatctccggc accggcatca
    21781 gcccgcagag tgccaggccc accgaacggc cgatgatgcc ttcctccgac agactggtat
    21841 cgaatacccg ctggtcgccg aaggcctcct gaagccccag cgtcgccgcg tgcacgccgc
    21901 ccttggggcc cacgtcctcg ccgaacacca gcagcttcgg attggtcttg agctcgaact
    21961 cgagggtccg tcgcaccgcc gtcaacagat tgatccgagc cccttcgggc cgcggggttt
    22021 cgctcgaagc cggaaagcgg tgtccctcca ccgccaggcc gccccgctgc tgcagctccg
    22081 gctgtccctt cgcgtcccgc tcggtggagc gatagcgggt gacacgggac cggtccggct
    22141 ccggccgcgc cagggcccga tcgagggccg cggccacgtc ggcccgggcc tgggactcga
    22201 ccgccgcaac ctcgtcatca ccgagcctgc cgtcgcgcag gaaggcgtac agcttcggca
    22261 gcggatccga cgcccgttcc tgttccagca gggccgccgg tttgtaggtc tgggtatcct
    22321 gtcccgagtg gcccgaga
//
LOCUS       DASWKS010000316         1791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3134492, whole genome shotgun sequence.
ACCESSION   DASWKS010000316 DASWKS010000000
VERSION     DASWKS010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3134492"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VGA78_09200"
     CDS             complement(<1..266)
                     /locus_tag="VGA78_09200"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX9894092.1"
                     /translation="MTAATVAIGMLQVVALVAVAPVLAGVMRTIRSRLEGRQGPSPLQ
                     PWKDLRKLLRKERLITQQASWVFVLAPLVLVASTVTVAAVIPTVA"
     gene            complement(263..>1791)
                     /locus_tag="VGA78_09205"
     CDS             complement(263..>1791)
                     /locus_tag="VGA78_09205"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX9894093.1"
                     /translation="WYGVMTHLSFAAILVGLLWFAAVAGGDGFDELRAAAAGMPEAVR
                     SGVFLLVLAGFGAKAGMVPLHVWLPRAHPEAPSHVSALMSGVMVKLGVYGVLRVAWDL
                     LGGGPTWWGMTVLILGGVSALFGILHALVADDLKRLLAYSTTENVGLIMVGVGAAGLF
                     ASAGDGGLAGLAVTAALLHVINHALFKGLLFLGAGSVVAAAGTRQLDRLGGLVRRMPV
                     TAACFGLGSLAVIALPPLNGFVSEWLLLKSLVHGASNPQTAVATVMPFAVGAVALTGG
                     LAAAAFVKAFGTGFLALPRSSGAESAVEVGFAMRTGMVILAAACVVLGLAPGVLLAPL
                     QRSVQALSGLADGPGVEVVGLGIETVGAGGRLVPAVIALALVSVLAVVLVLGWLVRVR
                     RVRRRLEAWACGRTIQTARMEYTATSFAEPLQRVFDDVLRPELDLEVSHKAESRYYLE
                     AVRYRIGISDAFESRLYRPLVDMFARIGNRARRVQNGSIHLYLAYMLVVVLVVLMVSR
                     "
BASE COUNT          373 a          693 c          511 g          214 t
ORIGIN      
        1 gcgacggtgg ggatgaccgc cgccaccgtc actgtcgacg ccaccagcac cagcggagca
       61 agcacgaaca cccagcttgc ctgctgggtg atgagccgct ccttgcgcag cagcttcctc
      121 aagtccttcc acggttgcag gggtgaggga ccctgccggc cctcgagccg tgaccggatg
      181 gtgcgcatta cacccgccag cacgggcgcg acggccacca gcgccacgac ctgcagcatt
      241 ccgatggcga cggtcgccgc tgtcaccgcg ataccatcaa cacaaccagg accaccacca
      301 gcatgtaggc caggtagagg tggatcgacc cgttctgcac ccgccgcgca cggttaccta
      361 tccgagcgaa catgtcgacc agcggccgat acaaacggga ctcgaaggcg tcgctgatcc
      421 cgatccgata ccgaaccgcc tccaggtagt agcgggactc cgccttgtgg gagacctcca
      481 gatccaactc cggtcgtagc acgtcgtcga acacccgttg caggggctcg gcgaacgatg
      541 ttgccgtgta ctccattcgc gccgtctgga tggtgcgccc gcatgcccac gcctccaacc
      601 ggcggcgtac ccggcgcacc ctgaccagcc accccaacac caacaccacg gctagcaccg
      661 agaccagcgc cagcgcgatc acggcgggaa cgagacgtcc cccagcccca acggtctcga
      721 tccccaaccc gacaacctcg acaccgggac cgtcggccag accgctcaac gcctgcaccg
      781 atcgctgcaa cggagccaac agcacaccgg gtgccagccc caacacgaca cacgccgccg
      841 caaggatcac catcccggtt cgcatggcga accccacctc cactgccgac tctgccccgg
      901 agctccgggg cagagccaag aaaccggtgc cgaacgcctt gacgaaggcg gccgccgcca
      961 gcccaccggt aagggcgacc gctccaaccg cgaacggcat caccgttgcc accgccgtct
     1021 gcgggttgga ggcaccgtgg accagcgact tgagcagcag ccactcactg acgaaaccat
     1081 tgaggggagg cagtgcgatg accgccagac tgcccaggcc gaagcaggca gcggtcaccg
     1141 gcatccgtct caccaaccct cccaggcggt cgagctggcg tgtgcccgcg gccgccacga
     1201 ccgaaccggc gccgaggaac agcaaaccct tgaacagtgc gtggttaatg acatgcaaga
     1261 gcgcggcggt cacagccaag ccagccaacc ccccgtcccc tgcggaggcg aacaggccgg
     1321 ctgcccccac tccgaccatg atgagcccca cgttctcggt ggtggagtag gcgagcagac
     1381 gcttcaggtc gtcggcgacg agggcgtgga gtatcccgaa cagggcggac acgccaccca
     1441 ggatgagcac tgtcatcccc caccacgtcg gtcccccgcc gagcaggtcc cacgccaccc
     1501 gcagcacgcc gtagacgccc agcttgacca tcaccccgga catcaacgcc gacacgtgac
     1561 tcggcgcctc gggatgtgcc ctcggcagcc acacgtgcag cggcaccatg cccgctttgg
     1621 ctccgaaacc cgccaacacc agcaggaaca ccccggaacg aactgcctcc ggcattccgg
     1681 ctgccgccgc ccgcaactcg tcgaacccat ctccaccagc gacagcagcg aaccacagaa
     1741 ggcccaccag gatggcggca aagctcaggt gcgtcatcac cccgtaccac c
//
LOCUS       DASWKS010000317         4886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3134671, whole genome shotgun sequence.
ACCESSION   DASWKS010000317 DASWKS010000000
VERSION     DASWKS010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3134671"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VGA78_09210"
     CDS             <1..585
                     /locus_tag="VGA78_09210"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9894094.1"
                     /translation="STVAHQNVGPQMAKDTTITDWDNWHRTPAPVAARPDLIFGDSLQ
                     LDLGGQRIWLHHIPPAHTDGDVVVFLPWANVLHTGDLVEPGAPPFIDYWSGGSLAGMI
                     AAADRILAMTDDQTRIVPGHGPVIGRNDVLAHRRMLVSLGDRVHAAIEAGKTLEQVQA
                     EAPAREFEPLLGGPRGATRFVRVVYYGIARLQPK"
     gene            652..1140
                     /locus_tag="VGA78_09215"
     CDS             652..1140
                     /locus_tag="VGA78_09215"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HEX9894095.1"
                     /translation="MRATPAFAALALLACQPAASPPPGFTDADRQAIEAQHTAWSAAA
                     NAGDRAALTALYTEDATVMPPNSPAASGRVGVRQVFDAFPPVGDTKLTSTDVVGTAES
                     AVVRGVYSMNLMLPGATAAVADTGKFIELWRKQADGTWLISWDIWNSDIAAPAPEPAK
                     KP"
     gene            1140..2006
                     /locus_tag="VGA78_09220"
     CDS             1140..2006
                     /locus_tag="VGA78_09220"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: protein motif:HMM:NF006492.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEX9894096.1"
                     /translation="MLGVIGGSGLYHLDGLQHTRWERVESPFGRPSDDLLLGELHGQP
                     VAFLPRHGRGHRIPPHLIDYRANIDALKRVGVTDLLSLSAVGSLREDLPPGTFVLVDQ
                     FIDRTRQRAGSFFGNGLVAHVDFAQPVCSRMGDAITAAAAGGGYGLRRGGTYLVIEGP
                     QFSTLAESRLYRQWGCDVIGMTNQPEARLAREAELCYATVAMVTDYDCWHPSHGHVSV
                     PEILAVLGANAERARDLVRRTVPLLSPHPASCSQGCDRALETAIMTSPGARDPGLVAK
                     LDAVAGRVLAPH"
     gene            2103..2630
                     /locus_tag="VGA78_09225"
     CDS             2103..2630
                     /locus_tag="VGA78_09225"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002634.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEX9894097.1"
                     /translation="MNLNALIRTIPDYPKPGILFRDITTLLKDPDGFRQTVDAFVARY
                     RDRGITKVAGIEARGFILGGAVAHGIGAGFVPIRKRGKLPWDTIGHDYELEYGTDRVE
                     LHSDAVAPGEPVLLLDDLIATGGTAEAAVALLSLIGGRVIEAGFVIELTDLSGRRRLE
                     DRGVPVFSLMDFAGH"
     gene            2630..3688
                     /gene="mtnA"
                     /locus_tag="VGA78_09230"
     CDS             2630..3688
                     /gene="mtnA"
                     /locus_tag="VGA78_09230"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEX9894098.1"
                     /translation="MSQDGVVPATLRVADDGWSIEVLDQTRLPHQVEVRRLATFEQVV
                     EAIAVMRVRGAPLIGIAAAYGICLAAMVDDTDAALDEVEAALLATRPTAVNLRTAVSR
                     MSRVVRAAPRSERVRRAYAEAAAIAEEDRVAGRAIGDHGLELLRDLHRRHHRPVNLLT
                     HCNAGRLVTLDYGTALAPVYRAREEGIPVHVWVDETRPRAQGWLTAWELGAAQVPHTV
                     IADTAAGHLLQTGQVDLAIVGTDRVVRNGDVCNKIGTYLVALAAREAGVPFYVACPSS
                     SIDWTLDDGAAIPIEERSGAEVTHVGDCRVAPEGTAVRNPAFDVTPSRLVTALVTERG
                     VCPATEVGLLSLFPAQRR"
     gene            3685..4305
                     /locus_tag="VGA78_09235"
     CDS             3685..4305
                     /locus_tag="VGA78_09235"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX9894099.1"
                     /translation="MSRSALLQAAVASARLGLNHGATGNLSMRHDAGMLITPTAVPYE
                     RLAEDDLVLMALDGAVASGARRPSSEWRLHAGVYQRRADVNAIVHAHPRFATTLACLR
                     EDLPAVHYMIALAGGDRIRCSGYAPFGSAELSAAAVEALGDRQACLLANHGLVTVGGD
                     LELALRIALEVETVAEYWWRARAIGQPVLLTPAEIADARARFEDYS"
     gene            4431..4832
                     /locus_tag="VGA78_09240"
     CDS             4431..4832
                     /locus_tag="VGA78_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894100.1"
                     /translation="MGSLFRSVAFVSAVFAAPAVAQSAQFPATPQGQLAAGFFAAVNS
                     PDETALVRFQDANFSEAALKRMSREQREAKTRQLRDQAGSLTLQEVRSAGSNQLVVIA
                     RGANLPANTRLTITFNFTSGSTPKIDSVQIV"
BASE COUNT          761 a         1660 c         1643 g          822 t
ORIGIN      
        1 tcgacggtgg cgcatcagaa cgtcgggccc cagatggcca aggacaccac catcaccgac
       61 tgggacaact ggcaccgcac gccggcgccg gtggccgccc ggcctgactt gatcttcggc
      121 gacagcctcc agttggatct ggggggccag cggatctggc tgcaccacat cccgccggcc
      181 cataccgatg gcgacgtggt cgtcttcctc ccctgggcca acgtcctgca caccggcgat
      241 ctggtggaac cgggggcgcc gcccttcatc gactactggt cgggtgggtc cctcgccgga
      301 atgatcgcgg ccgccgaccg gatcctggcg atgaccgatg atcagacccg gatcgtcccc
      361 gggcacgggc ccgtcatcgg gcgaaacgac gtgctcgcgc accgccgcat gctggtgtcc
      421 ctgggagacc gggtccacgc cgccatcgag gcggggaaaa ccctggagca ggttcaggcc
      481 gaagccccgg cccgggaatt cgagccgctg ctgggcgggc cccggggagc gacccggttc
      541 gttcgggtgg tctactacgg aatcgcccgc ctgcagccga agtgaatcgc cttctatatt
      601 gaccccggcc ggaagcgggc taggttcgcc ccatccccaa ccggagaacc catgcgcgcc
      661 acccccgctt tcgcggcgct ggctctgcta gcctgccagc cagccgccag cccgccaccg
      721 gggtttaccg atgcggaccg tcaggccatc gaggcccagc acaccgcctg gtccgccgcc
      781 gcaaacgcag gtgaccgggc cgcgctgacc gcgctgtaca ccgaggatgc caccgtgatg
      841 cccccgaact ccccggccgc ctcgggccgt gtcggcgtca ggcaggtctt cgacgcattt
      901 cctcccgtgg gcgatacgaa actcacctcc accgatgtcg tgggaaccgc cgagtcagcg
      961 gtggtgcggg gggtctattc gatgaacctg atgttgccgg gggcgaccgc cgcggtggcc
     1021 gataccggca aattcatcga gctctggcgc aaacaggcgg atggcacctg gctgatcagc
     1081 tgggatatct ggaactccga tatcgcggcg cctgcaccgg agccggccaa gaagccctag
     1141 tgctgggagt catcggaggg agcgggctct atcatctgga cgggctccag catacccgct
     1201 gggagcgggt cgagagtcca ttcggccgtc cctcggacga cctcctgctg ggcgagctgc
     1261 acgggcagcc ggtcgccttt cttccgcggc atggccgggg ccatcgaata ccgccccact
     1321 tgatcgatta ccgcgccaac atcgacgcgc tcaagcgggt gggcgtgacc gatctgctct
     1381 cgctcagcgc cgtggggtcg ctgcgcgagg acctgcctcc cggaaccttc gtcctggtcg
     1441 atcaattcat cgaccggacc cggcaacggg ccgggtcatt cttcggaaac ggcctggtgg
     1501 cccatgtgga cttcgcccaa ccggtatgct cccgcatggg cgatgcaatc acggccgccg
     1561 cggccggtgg cggatacggc ctgcggcggg gcggcaccta cctggtgatc gaggggcccc
     1621 agttctcgac cctggcggaa tctcggctct atcgccaatg gggttgcgat gtgattggaa
     1681 tgaccaatca acctgaggct cgtctggccc gcgaagccga gctttgttat gccaccgtgg
     1741 cgatggtcac cgattacgac tgctggcatc ccagccacgg gcacgtcagc gtgccggaga
     1801 tcctggcggt gctcggcgcc aacgccgagc gagcccgtga tctggtgcgg cgcacggtcc
     1861 cactcctgtc gccccatccc gcctcctgtt cacaaggctg cgaccgggcg ctcgaaaccg
     1921 ccatcatgac ctcgcctggg gccagggatc cggggctggt ggcaaagctc gacgcggtgg
     1981 ctggacgggt gctggcgccg cattgacagt tgacgattga caattcccga ttgaaaggcg
     2041 tctctcccct cgcgggccgg atccgcgagg cgcaattgtc aatcgtcaat cggcaatcat
     2101 caatgaatct caacgccctc atccgcacca tccccgacta ccccaagccc ggcatcctgt
     2161 ttcgcgacat taccacgttg ctcaaggatc cggacggctt tcggcagacc gtggacgcgt
     2221 tcgtggcgcg ttatcgcgat cggggcatca ccaaggtggc cggcatcgag gcccgcggct
     2281 tcattctggg cggtgcggtt gcgcacggca tcggggccgg attcgttccc atccgcaagc
     2341 gcggcaagct cccgtgggac accatcggac acgactacga gctcgagtac ggcaccgacc
     2401 gggtcgagct gcacagcgat gcggtcgctc ccggtgaacc ggtcctgttg ctggacgatc
     2461 tcatcgccac cgggggaacc gccgaggcgg cggtagcgct gctgagcttg atcgggggac
     2521 gggtgatcga agccgggttc gtgatcgagc tcaccgacct gtcgggtcgg cgccggctgg
     2581 aggaccgcgg cgttccggtg ttttcgctga tggacttcgc cggccattga tgagccagga
     2641 cggggtggtt cccgcgacgc tccgggtggc ggacgacggg tggtcgatcg aggtgctgga
     2701 tcagacccgc ctgccgcacc aggttgaggt gcggcgcctg gccaccttcg agcaagtggt
     2761 ggaagccatt gcggtgatgc gggtgcgcgg ggcaccgctc atcgggatcg ccgccgccta
     2821 cgggatctgc ctggccgcga tggttgacga caccgatgcc gcgctggacg aagtggaggc
     2881 ggccctgctg gccacccgcc ctaccgccgt caatctgcgg accgccgtca gccggatgtc
     2941 gcgtgtggtg cgggccgcgc ccaggagcga gcgggtccgg cgggcctacg ccgaggccgc
     3001 ggccatcgcg gaggaagatc gggtcgccgg tcgcgccatc ggcgatcacg gcctggagtt
     3061 gctgcgcgac ctccaccgcc gccatcaccg cccggtaaac ctgctgaccc actgcaacgc
     3121 gggccggctg gtgaccctgg actacggtac cgcgctcgcg ccggtctatc gggcccggga
     3181 ggaaggcatc ccggttcacg tctgggtcga tgaaacccgg ccccgggccc agggctggct
     3241 cacggcctgg gagctcggag cggcccaggt gcctcacacc gtcatcgccg ataccgctgc
     3301 cggccacctg ctccagacgg ggcaagtcga cctggccatt gtcggcaccg accgggtcgt
     3361 tcgaaacggc gacgtctgca acaaaatcgg gacctacctg gtagcgttgg ccgccaggga
     3421 ggccggagtg ccgttctacg tcgcctgccc ctcctccagc atcgattgga cgctggatga
     3481 cggagccgcc attccgatcg aagagcgctc cggggctgag gtcacccacg taggagactg
     3541 ccgagtggcg cccgagggta cggcggtacg aaaccccgcg ttcgacgtca caccgtcccg
     3601 gctggtgacc gcgctggtga cggagcgtgg cgtgtgtccc gccaccgagg tgggattgct
     3661 gtcgctcttt ccggcccagc gccggtgagc cggtccgctc tgctccaggc cgcggtggcc
     3721 tcggcccggc tcggcctcaa tcacggtgcg accggcaacc tgagcatgcg tcacgacgcc
     3781 ggcatgctga tcactcccac ggcggtgccg tacgagcgtc tggccgagga cgacctggtg
     3841 ctgatggcgc tggacggcgc tgtcgcctcc ggcgctcgcc ggccttcgag cgaatggcga
     3901 ctccacgccg gcgtgtacca gcgccgggcc gatgtcaacg ccatcgtgca tgcccatccc
     3961 cgctttgcca ccactctcgc ctgtctcaga gaagacctcc ccgcggtgca ttacatgatc
     4021 gccctggccg gcggcgaccg gatccgttgc agcggctatg cgccgttcgg cagcgccgag
     4081 ttgtcggcgg ccgccgtcga ggcgttaggc gatcgccagg cctgcctgct ggccaatcac
     4141 ggcctggtga cagtgggtgg cgacctcgag ttggcgctcc gaattgcgct ggaggtcgaa
     4201 acggtggcgg aatactggtg gcgcgcccgt gccatcggcc agccggtcct tctgactccg
     4261 gccgaaatcg cggatgccag ggctcggttc gaggactact cctgacggtt tccagtatgt
     4321 gcgtttttca gtcactgcac ggttcccggg gcatggtccc tgcgctatgc tccggtgtgc
     4381 gggcgccgat cagtcgcgcg tctgcccgtt tgacccactg aggagaggga atgggttcac
     4441 tgttcaggtc ggtggcattc gtgtctgccg tctttgcggc tccagcggtg gcacagtcgg
     4501 cacaattccc ggccacgcca caaggccagt tggcggcggg gtttttcgcc gcagtcaact
     4561 cacccgatga aacagccctg gtacggtttc aggacgcgaa cttcagcgaa gccgcgctca
     4621 agcgaatgtc gcgggagcag cgggaagcga aaacgcggca gctgcgcgac caggcgggaa
     4681 gtctcaccct gcaggaagtg cgctccgccg ggtccaacca gttggtggtc atcgcgcggg
     4741 gtgcgaacct gccggccaac acccggctga cgatcacctt caatttcacg tcgggctcga
     4801 ctcccaagat cgattcggtc cagatcgtct gaaccgcact gggatagcgg gattagcgaa
     4861 gggtgaacgg cttaccgttc accctt
//
LOCUS       DASWKS010000318         4074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2028035, whole genome shotgun sequence.
ACCESSION   DASWKS010000318 DASWKS010000000
VERSION     DASWKS010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2028035"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VGA78_09245"
     CDS             <1..363
                     /locus_tag="VGA78_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894101.1"
                     /translation="QQGAGAGSREQGAGSRELGAGSREQGDGSRGDAIRVLVRIVLGL
                     LLVDALLLGTAGVFTRRWWLLGAAGLSLAMALGVSALQRRFLRRWAEVDAARKELRSE
                     VTAMSETLAPKPANSRDS"
     gene            374..1261
                     /locus_tag="VGA78_09250"
     CDS             374..1261
                     /locus_tag="VGA78_09250"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HEX9894102.1"
                     /translation="MTVVFSHSACLQHDPGPGHPESPQRLRVLLERLRVDGRFPIREA
                     APASRESLLPVHPAHYIAYLEAIAARGGGVLDPDTIMNAASWEAARGAAGAALAAVES
                     ALAGTPAFAAVRPPGHHALPDRAMGFCLLGNAMIAARAALGAGRERVLIVDWDVHHGN
                     GTQAMMERDPAIRYISLHQWPAYPGTGRAEERGVGNVFNLPRPPGRPPAEYVAALWNT
                     VTEASTAWMPDVVLVSAGFDAMLGDPLAGFTLEPEHYADLTRRLRERFPQAAFAAVLE
                     GGYDPSRLADGVVAQLEAT"
     gene            1404..2429
                     /locus_tag="VGA78_09255"
     CDS             1404..2429
                     /locus_tag="VGA78_09255"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HEX9894103.1"
                     /translation="MSSLRLEAEVLSLRTKYPFRIARHEHFEVRTVLVKLRDADGVEG
                     WGEATPQRFYGETPETVLAALDLYSTALPENPFHIDAAERRWELLLAGNNSARAALST
                     ALYDLAGKRLGVPVHRLWGLNPAAAPRSTFTIGIDTAEMIRQKTREAESYPILKIKLG
                     SDRDREILQAIRDVTDKELRVDANCGWTVKQTIRMLPVLEEFGVTVLEQPLVPEDLDG
                     LGEIRRQSRIPLIVDESCLTSVDIPRLVGRVDGINIKLAKCGGLSEAIRMIHIARAHH
                     LMVMVGCMVETSIAITAAAQFTPLVDIVDLDGAALLAEDPYAGASIDGGQLVLPSGPG
                     LGVTARH"
     gene            2511..>4074
                     /gene="priA"
                     /locus_tag="VGA78_09260"
     CDS             2511..>4074
                     /gene="priA"
                     /locus_tag="VGA78_09260"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEX9894104.1"
                     /translation="MRLAHVAFPLPVFAPYTYRIPETLADRVTPGARVIVPVRRQEVT
                     GIVTAVDVPAPEAEPRDILATPDVLPAVGPALLETARWMAGYYGAPLGLCLRAMLPPG
                     YWGRSTVRIRLVEPASIGGTAGELLQWLEGHDGEAAMSAASRALRRPLWEVADRLVRV
                     GAVELDLVPPSPGPAPSVQRIAVVAGEPLTLLERDARFSRKPRQRALYETIEASGGRV
                     AIPQLVAHLGFSDGLVRALAGSGLVRIEAVEVARDPFAAEPTSSPPAELNRDQRHAVE
                     RIAGLEPGGGALLFGVTGSGKTLVYLEAIRAALETGRGAILLVPEIGLTPQTVSRVRG
                     FFGDAVAVLHSGLSDGERADAWRLLRRGERRVAVGARSAVFAPVQDLGVIVVDEEHDA
                     GYKNGETPRYQARDVAAVRARLEGARLVLGSATPSLDTIARIGPRLTRVDLPERVLAR
                     PLPPVTLVDLRHAVMVGGTGAVPWSEPLDQALAATLAQGEQALLLLNRRGFASFLQCR
                     SCGAVPECPHCSI"
BASE COUNT          598 a         1330 c         1469 g          677 t
ORIGIN      
        1 cagcagggag cgggagcagg gagcagggag cagggagcag ggagcaggga gctgggagct
       61 gggagcaggg agcagggaga cgggagcagg ggggatgcta ttcgcgttct ggttcgaatc
      121 gtcctggggc ttctcctcgt cgatgcgttg ctgctgggca cggcgggggt gttcacccgc
      181 cgctggtggc tcctgggagc tgccgggctg agcctggcca tggcgctcgg ggtgtcggcg
      241 ctgcagcggc gtttcctgcg ccgctgggcg gaagtggatg ccgcgaggaa ggaactccgg
      301 agcgaagtga ccgcgatgag tgagacgctc gcgcccaagc cggccaactc tcgcgattcg
      361 tgactcgcca cccgtgacgg tcgtcttcag ccactcggcc tgcctgcaac acgacccagg
      421 cccgggacat cccgaatcac cccaacggct gcgggtactg ctggagcgcc tgcgggtcga
      481 tggccggttc cctatccggg aggcggcgcc cgcgtctcgg gagtcgctgc tgccggtcca
      541 tcccgcgcat tacatcgcgt atctcgaagc gatcgcggcg cggggcggcg gggtgctgga
      601 tcccgatacc atcatgaacg ccgccagctg ggaggcggcc cggggtgcgg cgggagcggc
      661 gctcgcggcg gtcgagtcgg ccctggcggg cacccctgct ttcgccgcgg tgcggccgcc
      721 gggacaccac gcgcttcccg accgggcgat ggggttctgc ctcctcggca acgcgatgat
      781 cgcggcgcgg gccgccctcg gcgctggccg ggaacgggtc ctcattgtcg actgggatgt
      841 gcaccacggc aatggtaccc aggcgatgat ggagcgagat cctgcaatcc ggtacatctc
      901 tctccatcaa tggcccgcct atcccggcac gggccgggcc gaggaacgag gagtggggaa
      961 cgtattcaac ctgccccggc cgccgggacg ccccccggcc gagtacgtgg ccgcactctg
     1021 gaataccgtg accgaggcgt cgaccgcatg gatgcccgat gtggtgctgg tctcggcggg
     1081 attcgacgcc atgctgggcg atcccctggc cggattcacc ctggagccgg agcactacgc
     1141 ggacctgacc cgccgtctgc gcgaacgctt tcctcaggcc gcgtttgcgg cggtgctgga
     1201 aggtggttat gacccgtcgc ggctggctga tggcgtggtc gcgcaattgg aggccactta
     1261 ggtcgggtaa ggagggtaag acggtctcag tactcagtac tcagtactca gtactcggca
     1321 ctcagtactc agtacttgag ttgcccctac cattggatct gcgttttgta tacaattccc
     1381 ccttccctca gcccgagaac ctcgtgagct cgctccgcct ggaagccgaa gtgctgtcac
     1441 tccggaccaa gtaccccttc cggatcgcgc gccatgagca cttcgaggtc cgcaccgtgc
     1501 tggtgaagct gcgcgatgcc gatggggtgg aaggctgggg cgaggccacg ccgcagcgct
     1561 tctatggcga gacgccggag accgtgctgg cggcgctcga tctttactcc acggcgctgc
     1621 cggagaatcc ctttcacatc gacgcggcgg agcggcgttg ggagctgctg ctggcgggga
     1681 acaattcggc ccgcgcggcg ctctccaccg ccctgtacga cctggccggc aagcggctgg
     1741 gcgtgccggt tcaccggctg tggggactca atccggccgc cgccccccgc tccaccttca
     1801 ccatcggcat cgacaccgcg gagatgatcc gccagaagac ccgggaagcc gaatcctatc
     1861 cgatcctcaa gatcaagctg ggcagcgacc gggatcggga gatcctgcag gccatccgcg
     1921 acgtcaccga caaggagctg cgggtcgacg ccaactgcgg ctggaccgtg aagcagacca
     1981 tccgcatgct gccggtgctg gaggagttcg gcgtcacggt gctggagcag ccgctggtgc
     2041 cggaggatct cgatggattg ggagagatcc ggcgccaatc ccggatcccc ctgatcgtgg
     2101 acgagagctg cctgacgtcg gtggatatcc cacgcctggt gggcagggtc gacgggatca
     2161 acatcaagct ggcgaagtgc ggtgggttat ccgaggccat ccggatgatc cacatcgccc
     2221 gggcccatca cctcatggtg atggtcgggt gtatggtgga aacatcgatc gccattaccg
     2281 ctgcggccca gttcaccccg ttggtggata tcgtggacct ggacggcgcc gccctgctgg
     2341 cggaggaccc gtacgccggc gccagcatcg acggcgggca gctggtgctg cccagcgggc
     2401 cgggtcttgg agtaaccgca cggcattgac gattgacagt tgaccattga cgattgagca
     2461 tcggaaaggc cgctccagcg caatcgtcaa tggtcaacag tcaatcgtca atgcgccttg
     2521 cgcacgtcgc ctttccgctg ccggtcttcg ccccctatac ctatcgcatc cccgagaccc
     2581 tggccgaccg ggtgacaccc ggggcccggg tcattgtgcc ggtgcggcgc caggaagtca
     2641 ccggcatcgt cacggccgtc gacgtcccgg caccggaggc ggagccccgc gacatcctgg
     2701 ccacgcccga tgtgcttccg gcggtcgggc ccgccttact cgagaccgcc cggtggatgg
     2761 ccggctacta cggggcgccg ctgggacttt gtctccgggc catgctcccg cccggatact
     2821 ggggtcgttc caccgtacgc atccggctgg tggagccggc gtcgatcgga ggcacggccg
     2881 gcgaactgct gcagtggctc gaggggcacg atggcgaagc ggcgatgagt gccgcgagcc
     2941 gggcgctgcg acggccgctc tgggaagtgg ccgatcggct ggtccgggtt ggcgcggtgg
     3001 agctggacct ggtccctccc tcaccggggc cggcaccgag cgtccagcgg atcgcggtgg
     3061 tggcggggga gccgctgacg ctgctcgaac gcgacgcccg cttctcccgg aaaccgcgcc
     3121 agcgcgcgct gtatgagacg atcgaagctt cggggggccg ggttgcgata ccgcagctgg
     3181 tggcgcacct cgggttttcc gatggactgg tgcgggccct ggccggttcg gggctggtcc
     3241 ggatcgaggc ggtggaagtg gcccgcgatc cgttcgccgc cgagccgacc tcctcgcctc
     3301 ccgccgagct caatcgcgat cagcgccacg ccgtggagcg gatcgcaggc ctggagcccg
     3361 gtggcggagc cctgctcttc ggcgtgaccg ggagcggcaa gacgctggtc tatctcgagg
     3421 cgattcgcgc cgcgctcgag accggccgcg gggccattct cctggttccg gagatcggtc
     3481 tcacccctca gacggtaagc cgggtccgcg gtttcttcgg tgatgccgtc gccgtactcc
     3541 acagcgggct ctcggatggc gagcgcgccg atgcctggcg actgctccgg cggggcgagc
     3601 ggcgggtagc ggtgggagca cgctcggctg tctttgcccc ggtgcaggac ctgggtgtga
     3661 tcgtggtgga tgaggagcac gacgcggggt acaagaatgg agaaacgccc cgctatcagg
     3721 ccagagatgt cgccgcggtg cgggcccggc tggaaggcgc ccgtctggtg ctcggcagtg
     3781 ccaccccgtc gctcgatacc atcgcgcgga tcggcccgcg gctgacccgg gtcgatcttc
     3841 cggaacgggt tctggcgcgt ccgttaccgc cggtgacgct ggtggatctg cggcacgcgg
     3901 tgatggtcgg tggcaccgga gccgtgccct ggtccgagcc gctggatcag gccctggccg
     3961 cgacgctggc acagggggag caggcgctgc tgctgctcaa ccgccggggg ttcgcctcgt
     4021 ttctccagtg ccgcagctgc ggggcggtgc ccgagtgccc ccactgcagc atct
//
LOCUS       DASWKS010000319         3441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1655393, whole genome shotgun sequence.
ACCESSION   DASWKS010000319 DASWKS010000000
VERSION     DASWKS010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1655393"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VGA78_09265"
     CDS             <1..689
                     /locus_tag="VGA78_09265"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HEX9894105.1"
                     /translation="STDFDRLRPPSTRSPATMPRYLTEFIGTFFLCLTISLTVVGGYP
                     LPALPIGASLMVMVYMGGPISGGHYNPAVSTAALLGGALPASRFVPYLLSQLLGALAA
                     GMVTGVVTGDVASPAPAPDVSPGIALLVEFLFTFALALVVLTTAASKRAQGNSYFGLA
                     IGFTIVIAVAAGGGISGGAFNPAVGLGLGLIDGLMGGAPMGHLWLYLVGPGVGGVAAA
                     LVFKFQESMP"
     gene            708..1775
                     /gene="arsB"
                     /locus_tag="VGA78_09270"
     CDS             708..1775
                     /gene="arsB"
                     /locus_tag="VGA78_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001272375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HEX9894106.1"
                     /translation="MSPFERYLTIWVALCIVAGVALGHLAPGVFQTIGRAEVAQVNLP
                     VAGLIWLMIIPMLTRIDFRSLGQVKKHWRGIGVTLFINWAVKPFSMAALGWLFIGHLF
                     RPYLPADQINSYIAGLILLAAAPCTAMVFVWSNLSDGEPHFTLSQVAINDTIMIFAFA
                     PIVALLLGLSAITVPWQTLLLSVGLYIVVPVILAQILRARLLVAGGPAALARMLGVLQ
                     PISLGALLTTLVLLFGFQGEQILTQPLIIALLAVPILIQVYFNSGLAYLLNRVTGEAH
                     CVAAPSALIGASNFFELAVAAAISLFGFQSGAALATVVGVLIEVPVMLSVVKIVNATK
                     GWYELGAAVQRRSSPDQAPGA"
     gene            complement(1779..>3441)
                     /locus_tag="VGA78_09275"
     CDS             complement(1779..>3441)
                     /locus_tag="VGA78_09275"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9894107.1"
                     /translation="GIAANQPGGAFNLAHLSTEDVERIEILRGPASVLYGSDAVSGVI
                     QIVTRRGKGRPRLDLSARVGSFGTADLGAQAAGSSGPASWSAGVTRFTSDGIYPYNNR
                     YRSQTASARLGLTPDERTDLGLAARWGDHRAHFPTDFAGVPSDTNQFSTERGLSLSLD
                     AGRRLGRVVELRVLAGLFDSEQGFEDRSDTPADTTGFGFEGFRTGEVRRTLLDLRALL
                     RPTERLTLSAGAERVDERERLSNLTRSNFGDGGFDDETEFERDRGNTALYAQALGALG
                     TRVDVQGGLRYEDNQVFGDFTTWRLGLVLRPASALRLHGAGGSAFRQPTFAEQFANTP
                     FEVGNPDLTPERATSWEAGAELALAERRVMVTATWFAQRFRGLIQYQAAASGLPNYFN
                     VARARADGVELGAHFALSRSLSLNGRYTWLETEVQDDGGQGNTTYTEGEPLLRRPAHT
                     AGIGLSWHPGTSGSYALQLQRTGDRVDVDFREFPAERVTLEGYTLLDASADVPLAALF
                     GGRASWARSLGLTLVGQNLLDANYQSVVGFRGRGRTLLLGARARF"
BASE COUNT          500 a         1184 c         1144 g          613 t
ORIGIN      
        1 cttcgaccga cttcgaccgc cttcgaccgc cttcgacccg gagcccagcg accatgcccc
       61 gatacctcac cgagttcatc ggcaccttct tcctctgcct caccatcagc ctgacggttg
      121 tcggcgggta ccccctgccc gcgcttccaa tcggtgccag cctcatggtc atggtctaca
      181 tgggcgggcc gatctcaggc ggtcactaca atccggccgt atccacggct gccctgctcg
      241 gcggcgcgct gccggccagc cggtttgtcc cctatctcct gagccagctc ctgggcgctc
      301 tggcggccgg gatggtgacc ggtgtggtga ccggcgacgt cgcctcgccg gcccccgcac
      361 cggatgtgtc cccagggatc gcgctgctgg tggagttcct ctttaccttc gcgctggcgc
      421 tggtggtgct gacgacggcc gcctcgaaac gggcccaggg gaacagctac ttcggcctgg
      481 cgatcggatt caccatcgtc atcgcggtgg ccgcgggagg agggatctcc ggcggggcct
      541 tcaatcccgc cgtgggcctc gggctggggc tgatcgatgg tctgatgggc ggggcgccga
      601 tgggtcacct ctggctctat ctggtcgggc cgggcgtggg aggggtcgcg gcggcgctgg
      661 tattcaagtt tcaggagagc atgccgtaaa cgtccacgct gaatcgcatg tcccccttcg
      721 aacgctacct gactatctgg gtggccctgt gcatcgtcgc cggggttgcc ctggggcatc
      781 tggctcccgg cgtctttcaa accatcggcc gagccgaagt ggcgcaggtc aatttgccgg
      841 tggcagggtt gatctggctg atgatcatcc cgatgctgac caggatcgac ttccggtccc
      901 tggggcaggt caagaagcat tggcgcggca tcggcgtgac cctcttcatc aactgggccg
      961 tgaagccctt ctcgatggcc gcgcttggct ggctcttcat cggccatctg ttccgaccct
     1021 atctgccggc cgatcagatc aacagctaca tcgcgggcct gatcctgctg gccgccgccc
     1081 cctgtaccgc catggtcttc gtctggagca atctctccga tggagagccc cacttcaccc
     1141 tgagccaggt ggcgatcaac gacaccatca tgatcttcgc cttcgcgccg atcgtcgcgc
     1201 tgttgctcgg gctctcggcg atcacggtac cctggcagac cctcctgctg tcggtcggcc
     1261 tgtacatcgt cgtgcccgtc atcctcgccc agattctgcg ggcccgcctg ctggtggccg
     1321 gaggccccgc ggcactggcg cgaatgctcg gggtgctgca gcccatctcg ctcggcgccc
     1381 tgctgacgac gctggtcctg ctgttcgggt tccagggaga acagatcctg acccaacccc
     1441 tgatcatcgc gctgctggcg gtgccgatcc tgatccaggt ctacttcaac tcgggcctgg
     1501 cctatctgct caaccgggtg accggggagg cgcactgtgt ggcggcccca tccgccctga
     1561 tcggtgcgag caacttcttc gagctggcgg tggccgccgc gatcagcctg ttcgggttcc
     1621 aatccggggc cgcgctcgcc accgtggtcg gagtcctcat cgaggtaccg gtcatgctct
     1681 cggtggtgaa aatcgtgaac gccaccaagg gttggtacga gctgggggca gccgttcaac
     1741 gccggtcaag ccctgatcaa gccccgggtg catgagcttt agaagcgtgc cctggctccc
     1801 agcagcagcg tccttccccg tcctctgaac cccaccaccg actggtagtt ggcgtcgagc
     1861 agattctgtc ccaccagcgt gagccccagc gaacgcgccc acgatgcccg cccgccaaag
     1921 agggccgcca gcggaacatc ggccgaggcg tcgagcaggg tgtagccctc gagcgtcacc
     1981 cgctccgccg ggaattcccg gaagtccaca tcgacccgat ctccggtgcg ttggagttgc
     2041 aaggcgtagc ttccggaggt gccggggtgc caggagaggc cgatgccggc agtgtgagcc
     2101 gggcggcgca gcagcggctc cccctcagtg tacgtggtgt ttccctggcc gccgtcatcc
     2161 tgcacctcgg tctccagcca ggtgtagcgc ccgttcagtg agagcgagcg gctgagcgcg
     2221 aagtgggcgc ccagctccac gccatcggcc cgggcccgcg ccacgttgaa atagttcggc
     2281 aggcccgaag ccgcggcctg gtactgaatg agaccgcgga atcgctgagc gaaccaggtc
     2341 gccgtcacca tcacccgccg ttccgccaac gccagttctg cgcccgcttc ccagctggtg
     2401 gcgcgctccg gtgtgagatc ggggttgccc acttcgaagg gggtattggc gaactgttcc
     2461 gcgaaggtgg gctggcgaaa agcggaaccg cccgctccat gcaggcgcaa cgcggaagcc
     2521 ggccgcagga ccaggcccaa ccgccaggtg gtgaagtcac cgaacacctg gttgtcctcg
     2581 tagcgcagcc cgccctgcac atcgacccgg gttcccagtg ccccaagggc ctgtgcgtag
     2641 agcgcggtgt tccctcggtc gcgctcgaac tcggtctcgt catcgaaccc accgtcgccg
     2701 aagttggagc gggtgagatt ggagagccgt tcccgctcgt ccacccgttc cgcaccggcg
     2761 gagagggtca gccgttcggt gggccggagc agagcgcgca ggtcgagcag ggtgcgccgc
     2821 acctcgccgg tgcgaaagcc ctcgaagccg aatccggtcg tgtcggccgg ggtatcgctc
     2881 cgatcctcga agccctgctc cgagtcgaac aggccggcca ggacccgcag ctccaccacg
     2941 cgacccagcc ggcgtccggc gtcgaggctc aggctcaggc cccgttcggt gctgaactga
     3001 ttggtgtcgg acgggacgcc ggcgaaatcg gtggggaaat gggctcggtg atcgccccag
     3061 cgcgcggcca gtcccaggtc ggtgcgctca tccggcgtga gccccagacg agccgaggcg
     3121 gtctggctcc ggtagcggtt gttgtaggga tagatcccgt cgctggtgaa acgggtgact
     3181 ccggccgacc aactggccgg gccgctcgat cccgcggcct gggccccgag gtcggcggtg
     3241 ccgaagctgc cgacccgggc cgacaggtcc agccggggcc ggcccttgcc tcgccgagtg
     3301 acgatctgga tcacgccgct caccgcatcg gagccgtaga gcacgctggc gggcccgcgc
     3361 aggatctcga tccgttcgac gtcctcggtg gagaggtggg ccaggttgaa ggcgccgccg
     3421 ggctggttgg cggcgatgcc g
//
LOCUS       DASWKS010000320         3661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2401461, whole genome shotgun sequence.
ACCESSION   DASWKS010000320 DASWKS010000000
VERSION     DASWKS010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3661
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2401461"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VGA78_09280"
     CDS             <1..1021
                     /locus_tag="VGA78_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894108.1"
                     /translation="YGVVLPALAQAYREHLETTNPLVDHPTRRIVRQALLDHDEALEW
                     GRTALGALTRRDPSAAARARAWQQHLRAYLEAAGDIAGPPPHQGGPLPPTRSASPSEP
                     DLHPRRDERFAGQYNFEFPPHVVYNDPRVPPEERNLALLCKRTLEMDVPEMMASILVQ
                     RQDQPWEFQLDFSRQLWDEMRHAMMGSVAFEARGVDWTRIPLNVGFALRLNLFADPLE
                     RQTLLFAIEQSLMPADTGKRFEYQTAVDAGDPLSAHFHDYDWADEVLHAQIGRRWLKR
                     EGITQDQAAERAQAIHQRTWAALERFKHLDPQRDWWDEFVRQVLGHPSASRPEERAEL
                     RIISE"
     gene            1026..>3661
                     /locus_tag="VGA78_09285"
     CDS             1026..>3661
                     /locus_tag="VGA78_09285"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004559 - alpha-mannosidase activity
                     [Evidence IEA];
                     GO_process: GO:0006013 - mannose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 38 C-terminal
                     domain-containing protein"
                     /protein_id="HEX9894109.1"
                     /translation="MSTRLTFHLIPHTHWDREWYLPRAAFQARLIPVLEALLLQLEQE
                     PAARFVLDGQTVLVEDFLAARPDLADRVAAQVGRGALEIGPWYVLADELIPTGESLLR
                     NLLEGGRDAARWGRRLDVLYSPDAFGHPGALPALAREFGIEAGVAWRGVGRPGGSDRD
                     LYHWGSPADGGLLLYHLPREGYSIGAELATAVQDLRPRWTAVRKELVARSVTSQVAVF
                     VGADHHAAAPDLAGLRERLQAFEPEHEVRISGLAEFFASVVEAGPSHAKSGPAIPALG
                     GELRRIDDHAWVLQGVHGTRTRMKRRHSVTELTVSRLAEPLATLSALRGGIDHRGVLR
                     LAWRSLLQSQFHDTLGGCSADDVAREQDVRLSSVEALIREIGARSWRDLAGHDPDLAR
                     VLPDRSSPALILWNPCARIRRGIVTAELSFFRSDVLVGPPGGRVAATGTGYRPVALEA
                     ASGERLPLQVIGMRPGQERLDADHHYPDQDLVDRVFVAFQPPPLAGLALRRFHLRTAK
                     GLPRASGLDVKPDLISNRLIAARVSPIGVITLEDRRSGERYPGLGVLEDEPDGGDSYT
                     FSRGRGRTALGGRHRSRAIIAGGPLVGAIETRWTMASATQGDLEFRLVAVLHADSPIL
                     RLRLDVENGARDHRLRARFPVGAGEDACAGAAFGLVLRPPVHRQRGHESIELPDPTAP
                     AHRFAAAAEYTRGLAILAPGFFQYEWTADRDLLVTLIRSVGELSKPDLPERPGHAGWP
                     QPTPLAQEPGDHSVQLAVVPIGEADLDRPDRLMELWEDAFLPVQSGFFRRYARNAGAQ
                     PERDDGIQLEGDGLVLSAIKRAEQGEGLVLRCYNITESPVEGRWVFAGALREAWLLRA
                     DETGALELSLPEDRRSVPFSAGA"
BASE COUNT          542 a         1268 c         1257 g          594 t
ORIGIN      
        1 ctatggcgtg gtcctgcccg cactcgccca ggcataccgg gaacacctcg agaccaccaa
       61 cccgctggtg gaccatccca cccggcgtat cgttcgacag gcattgctgg accacgacga
      121 ggcgctcgag tggggcagga cggcgttggg cgcactgacc cggagggacc catccgccgc
      181 cgcccgagcg cgggcctggc agcagcatct tcgagcctac ctcgaggccg ccggcgacat
      241 cgcgggtccc ccgccccacc agggcggccc gttgccgccg acccggtcag cctcgccgtc
      301 agagcccgac ctgcatcccc ggcgggatga gcgtttcgcg ggccagtaca acttcgagtt
      361 cccgccccat gtggtctaca acgaccccag ggtcccgccc gaagagcgca atctggcgct
      421 gctgtgcaag cggaccctgg aaatggacgt gcccgagatg atggcatcga tcctggtgca
      481 gcggcaagac cagccgtggg aattccagct cgatttttcc cgccagctgt gggacgaaat
      541 gcgccacgcc atgatgggca gtgtggcctt cgaagcccgc ggcgtcgatt ggaccaggat
      601 tccgctcaac gtcggctttg cccttcgcct caacctgttc gccgatccgc tggagcggca
      661 gacgctgttg ttcgcgatcg agcagtcgct catgccggcg gacaccggca agcgattcga
      721 gtaccagacc gccgtcgacg cgggtgaccc tctctcggcc cacttccacg actacgattg
      781 ggccgacgag gtactccacg cccagatcgg ccgtcgttgg ctcaagcgcg agggcatcac
      841 ccaagaccag gcggctgagc gggcccaggc cattcaccag cgcacctggg cggccctgga
      901 gcgtttcaag cacctggacc ctcagcgcga ctggtgggac gagttcgtgc ggcaggtgct
      961 gggccaccct agtgcctccc gcccggaaga gcgggccgag cttcgcatca tctctgaatg
     1021 aactcgtgag cacccgcctc acgttccacc tgatccccca cacccattgg gatcgggagt
     1081 ggtatctgcc gcgcgcggcg tttcaggccc ggctgatacc ggtcctcgaa gccctgctgc
     1141 tccagctgga acaggagccc gcggcgcggt tcgtcctgga tggccagacc gtgctggtgg
     1201 aagacttcct cgcggcccga cccgacctgg ccgaccgcgt ggccgcgcag gtgggacggg
     1261 gcgcgctcga gatcggcccc tggtacgtgc tggccgacga gctgatcccg accggcgaat
     1321 cgttgctccg caacctgctc gagggcggcc gggatgccgc ccgatggggc cgccgcctgg
     1381 acgtgttgta cagcccggat gcttttggcc atccgggggc gttgcccgcc ttggctcgcg
     1441 agttcggtat cgaggccggg gtggcctggc gcggggtggg ccggcccgga ggctccgacc
     1501 gggatctcta tcactggggt tcacccgccg acggcgggtt gctgctgtac cacctgccgc
     1561 gggaggggta ttcgatcggc gccgagctgg cgacggcggt tcaggatctc cgcccgcgat
     1621 ggaccgccgt gaggaaggag ctggtcgccc ggagcgtcac cagccaggtg gcggtgttcg
     1681 tcggggcgga tcaccacgcg gcggctccgg atctggccgg cttgcgagaa cggctgcagg
     1741 cattcgaacc ggagcacgag gttcgcatca gcgggctggc cgagttcttc gcgtcggtcg
     1801 tggaggccgg accgagccat gcgaaatctg gccccgccat cccggctctt gggggagagc
     1861 tgcgccggat cgacgatcac gcctgggtgc tgcaaggcgt ccacggtacc cggacgcgaa
     1921 tgaagcggcg gcactccgtc accgaactga ccgtgtcgcg gctggctgag cccctcgcta
     1981 cgctctcggc tctgcgggga gggatcgatc atcgcggcgt gctgcgcctc gcctggcgct
     2041 cgctgctaca atcgcagttc cacgacaccc tgggcggttg ctcggccgac gatgtagccc
     2101 gcgagcagga cgttcgactg agtagtgtgg aggcgttgat ccgggaaatc ggcgcccggt
     2161 cctggcgcga cctcgccggc cacgatccgg atctggcccg ggtccttccc gaccggagct
     2221 cgcccgcact gattctctgg aatccctgcg cccgcatccg ccggggaatc gtcaccgccg
     2281 agttgagctt ctttcgaagc gacgttctgg tgggcccgcc cgggggccgc gttgccgcta
     2341 ccggaaccgg ctaccggccg gtggcgctgg aagcagcttc aggagagcgg cttcccctgc
     2401 aggtgatcgg catgcgcccc ggccaggagc ggctcgacgc ggaccaccac tatcccgacc
     2461 aggacctggt cgatcgggtc ttcgtggcat tccagccgcc accgctcgcc ggtctcgccc
     2521 tgcggcggtt ccatctcagg actgcgaaag gcttgccccg ggccagcggc ctcgacgtaa
     2581 aacccgacct gatctcgaac cggctcatcg cggcccgggt gtcacccatc ggcgtcatta
     2641 ccctggaaga ccgccgcagc ggcgaacggt accccggcct cggagtcctg gaggacgaac
     2701 cggacggggg cgacagctac accttctccc ggggccgcgg tcgaaccgcc ctgggtggcc
     2761 gccatcgttc ccgtgccatc attgctggtg gacccctcgt gggcgccatc gagactcgct
     2821 ggacgatggc atcggcgacc cagggggatc tggaattccg actggtcgcc gtgctccacg
     2881 ccgattcgcc gatcctccgg ctccggctgg acgtcgagaa cggtgcccgg gatcatcgac
     2941 tgcgcgcccg tttccccgtc ggcgcgggcg aggacgcgtg cgccggggcc gcgttcggct
     3001 tggtgctgag gccaccggtc caccggcagc ggggccatga gtcgatcgag cttccggatc
     3061 cgaccgctcc ggcccatcgt ttcgccgccg cggcggagta cacccgcggg ctggcgatcc
     3121 tcgcgccagg attctttcag tatgagtgga ccgccgatcg cgacctgctg gtcacgctga
     3181 ttcggtcagt cggggagctg tcgaaaccgg atctgcccga acggcccggc catgccggct
     3241 ggccccagcc caccccgctg gcccaggagc cgggcgatca cagcgtgcag ttggccgtgg
     3301 taccgatcgg cgaagcggat ctggatcggc cggaccgact gatggagctc tgggaggatg
     3361 cgttcctgcc agtgcaatcc gggttctttc gccgctacgc caggaacgcg ggagcacagc
     3421 cggagcgcga cgacgggatc caactggagg gcgacggact ggtcctgtcg gccatcaaac
     3481 gagcggagca gggtgaaggc ctggttctcc gctgctacaa catcacggaa tctcccgttg
     3541 aggggcgctg ggtcttcgcc ggcgcgttgc gggaggcctg gttgctgcga gctgatgaaa
     3601 ccggggcact ggaactctcg ctaccggagg accggcgctc ggtgcccttc tcggccgggg
     3661 c
//
LOCUS       DASWKS010000321         6153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1268781, whole genome shotgun sequence.
ACCESSION   DASWKS010000321 DASWKS010000000
VERSION     DASWKS010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6153
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268781"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2366)
                     /locus_tag="VGA78_09290"
     CDS             complement(<1..2366)
                     /locus_tag="VGA78_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX9894110.1"
                     /translation="MPSIPELFESMAWGPAPEAPARANAWLDSHDRKFGHFINGRFVP
                     PQSGEWFETINPATREPLAQVAQGSSDDIDAAVRAARVVQQAWWAIGGHGRARHLYAL
                     ARHIQKHSRLFAVLESMDNGKPIRESRDIDIPLVARHFYHHAGWAQLMEQELPGYQPV
                     GVVGQIIPWNFPLLMLAWKIAPAIALGNTVVLKPAEFTPLTALLFAEICREAGLPEGV
                     VNIVTGEGKTGAALVDHPGVDKIAFTGSTEVGRIIRVATAGSGKKLSLELGGKSPFLV
                     FEDADLDSVVEGVVDAIWFNQGQVCCAGSRILAQESIAPQLVTKLKARMETLRVGNSL
                     DKAVDIGAIVAPVQLERIESLVAKGRAEGANLWQPSWSCPTDGLFYPPTLFTEVEPAA
                     TIAQVEIFGPVVVLMTFRTPAEAVELANNTRYGLAASIWSENINLALDIAPQVKAGTV
                     WVNCTNVFDAASGFGGYRESGFGREGGREGLWEYLKRSEQSDGSEQSVVRSSRPSDPT
                     DSSDLTDQVEIDRTPKLYIGGKQVRPDSGYSLSVLDWRGKQVAEVGAGNRKDVRNAVE
                     AAHQAQPGWARATAHFRAQVLYYLGENLAARAGEFGHRIAWFTGVSADDARREVDAAV
                     SRVFSYAAWADKWEGAVHPTPFRNVTLAMKEPIGVMAVVAAESPSLLGLLSAVLPAIT
                     AGNAVVAVPSERWPLLGTDCYQLFDTSDLPGGVINLVTGKRDELAGVLAAHDDVDGIW
                     YWGTLAGSAHVEKWSAGNMKRTWVDYGKGLPWFNRAEAEGERFLREAT"
     gene            complement(2418..3446)
                     /gene="deoC"
                     /locus_tag="VGA78_09295"
     CDS             complement(2418..3446)
                     /gene="deoC"
                     /locus_tag="VGA78_09295"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEX9894111.1"
                     /translation="MTAPTRKPRYAASAGSRAVAPVHPPAGLERNPGIPLDLAWVRDI
                     RINRSAVERRAATLVTRRSVKLDWQVAWLLRAVTLMDLTTLQGDDTPGRVRRLCAKAR
                     QPVRADLLEALGAGSLDITVAAVCVYHAFLETAQRALEGSGVPVAVVSTGFPAGLTPF
                     RLRLSEIETSVEAGADEIDIVITRGHVLTGSWKALYDEVRAFRDAAGPAHLKTILGTG
                     ELGTLRDVARASAVCMMAGADFIKTSTGKESVNATLPVGLVMARSIRDYRERTGCLVG
                     LKPAGGIRTAKQSLDWLGLLKEELGDRWLRPDLFRFGASSLLADIERQLEYAATGAYS
                     AFHRHPLA"
     gene            complement(3573..4322)
                     /locus_tag="VGA78_09300"
     CDS             complement(3573..4322)
                     /locus_tag="VGA78_09300"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX9894112.1"
                     /translation="MFPYRDDNPTVLPPVATVAIIIANVLAWVLIQGLGSEPALTRSV
                     CTLGLIPGELLHQVEAGTRVRLGPAADCILGGTPTWYTPVTSMFLHGGWLHLIGNMWF
                     LWVFGNNIEDSMGHLRYILFYLICGLGAAAAQMVVNPASTIPMVGASGAISGIMGAYI
                     VLYPRVRVHMLVFLGFFITTIAVPAWVMLGYWFLLQVLGGLPALAQESGGVAFWAHAG
                     GFIAGMVLIWLFRNRTLVARRTKLVSPYGWG"
     gene            4409..5875
                     /locus_tag="VGA78_09305"
     CDS             4409..5875
                     /locus_tag="VGA78_09305"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894113.1"
                     /translation="MHPIGRRAFLGLNAAALAGGLWPRRSGFLSQGSDRMVYHLRYDA
                     DAQGRLVVTMSPPVPHVGPVELVMPRAIPMGYGMARYDDFVRGVRAWSPMREQLPIRR
                     LDGPRWRVGRPGASIQWIRYVVDVNRMEERVFAASDASKARESYLCLLGYSALGYLDG
                     QEAVPVRIDVRGPVGWPVFSTLSPTGQPWPGPQSFNASDFYAAADSQILLGSAVQIRQ
                     LAGTRPLFLAGYAEGPADLNMEGALIESAFRLVVEWFGGAPFPHYSAIVEYLRPVSPD
                     HRYGFSMEHLDSSTYFMERGRSLNARSSAEDRERSRFNYAHHIAHSWIPKRVYGEGYF
                     PFRWELPPVLDTIWFSEGFARWIAIDALAAGAAPAEKGAYRARQLERLAQTLSTLPGL
                     FRATPLVSLSRVGSTQYSEDFRTGQALFCRGALLAEAVDARIRQGSAGSKGLRDALRA
                     MLQWSARERRGFRLDELPRLVGGPVGVDLGPVFAKWLA"
     gene            5903..>6153
                     /locus_tag="VGA78_09310"
     CDS             5903..>6153
                     /locus_tag="VGA78_09310"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HEX9894114.1"
                     /translation="MSPMIAYEVTVDVAPELVDQYIAYVLIRHVPDLLATGCFVGAEF
                     AQAGEHKFRQRYLAFSREDLDRYLAEHAVRLREDFARHFP"
BASE COUNT         1000 a         2077 c         2043 g         1033 t
ORIGIN      
        1 tgggtggcct cgcgcaggaa ccgttcaccc tccgcctcgg cccggttgaa ccagggcagc
       61 cctttcccgt agtccaccca ggtccgcttc atgttcccgg ccgaccactt ttccacgtgg
      121 gccgagccgg ccagcgtgcc ccagtaccag atcccgtcca cgtcgtcgtg ggcggccagc
      181 acgccggcga gctcgtcccg cttgccggtg accaggttga tcactccgcc cggcaggtcg
      241 gaggtatcga acagctggta gcagtcggtg ccgagcagcg gccagcgttc gctcggcacc
      301 gcgaccacgg cgttccccgc ggtaatggcg ggcaggacgg ccgacagcag cccgagcaac
      361 gaaggcgact cggcagcgac gaccgccatg acgccgatcg gttccttcat cgcgagcgtg
      421 acgttgcgga agggagtggg gtggaccgct ccctcccatt tgtcggccca ggccgcgtag
      481 ctgaagaccc gagagacggc ggcatcgacc tcacgccggg catcgtcggc ggacacgccg
      541 gtgaaccagg cgatgcgatg cccgaattct ccggcccggg ctgccaggtt ctcacccaga
      601 tagtagagca cctgggcccg aaaatgggcc gtggcccggg cccagcccgg ctgagcctgg
      661 tgggccgctt cgaccgcgtt gcggacatct ttgcggttcc ccgccccgac ctcggccacc
      721 tgcttgcctc gccagtcgag tactgagagc gagtagcccg agtcgggccg gacctgcttc
      781 ccgccgatgt agagcttcgg ggtacggtcg atctccacct ggtcggtcag gtcggacgag
      841 tcggtcgggt cggacgggcg gctggagcga acgaccgact gttccgaccc gtccgactgt
      901 tccgaccgtt tgaggtattc ccagagcccc tcgcgcccgc cttcgcgccc gaacccgctc
      961 tcgcgatagc ccccgaagcc gctggccgcg tcgaagacgt tggtgcagtt cacccagact
     1021 gtcccggcct tgacctgggg cgcgatgtcg agcgccaggt tgatgttctc gctccagatg
     1081 ctggcggcca gcccgtagcg ggtgttgttg gccagctcca ccgcctcggc cggggtacgg
     1141 aaggtcatca gcaccaccac cgggccgaaa atctctacct gcgcgatggt tgcggccggc
     1201 tccacttcgg taaacagagt gggtggatag aacaggccgt cggtgggaca gctccaggag
     1261 ggctgccaca ggttcgcgcc ttcggcccgc cccttggcga ccaggctctc gatccgttcc
     1321 agttggaccg gagcgacgat ggcgccgatg tcgaccgcct tgtcgagcga gttgccgacc
     1381 cggagcgtct ccatccgggc cttgagcttg gtcaccagct gcggggcgat gctctcctgc
     1441 gccaggattc gggagccggc gcaacagacc tgcccctgat tgaaccagat ggcgtcgacc
     1501 acgccttcga ccacgctgtc caggtcggcg tcctcgaaga ccaggaaagg cgactttcct
     1561 cccagctcca gcgacagctt cttgccgctc cctgcggtcg ccacccggat gatccggccc
     1621 acttcggtgg atccggtgaa ggcgatttta tcgacgccgg gatggtccac cagtgccgcg
     1681 ccagtcttcc cctcaccggt gacgatgttg accacaccct ccggcagccc ggcttcgcgg
     1741 cagatctcgg cgaacagcag ggccgtgagc ggggtgaact ccgccggctt gagcaccacc
     1801 gtgtttccga gcgcaatggc gggagcgatc ttccacgcca gcatgaggag cggaaagttc
     1861 caggggatga tctgacccac cacgcccacc ggctggtatc caggaagctc ctgctccatc
     1921 agctgggccc aacccgcgtg gtgatagaag tgacgggcca ccagcgggat gtcgatatcg
     1981 cgcgattccc ggatcggttt gccgttgtcc atcgactcga gcaccgcaaa cagccggctg
     2041 tgtttctgga tgtgacgggc cagggcgtac aggtgacggg ctcggccgtg tcctccgatc
     2101 gcccaccacg cttgctgcac cacccgggca gcgcggacgg ccgcatcgat gtcgtcggac
     2161 gacccctgcg ccacctgggc caggggttcc cgagtggcgg gattgatggt ttcgaaccac
     2221 tcaccgctct ggggtggaac gaaccggccg ttgatgaagt ggccgaactt ccggtcgtga
     2281 gaatcgagcc acgcgttggc gcgcgccggc gcctcggggg ccggacccca ggccatggac
     2341 tcgaacagct cgggaatgct tggcatgtca gtggctcaat gacggatgac ggaagccagg
     2401 tgtcgcgaca ccaggtctca cgccagcgga tgacgatgga aggcggagta cgccccggtc
     2461 gcggcgtatt cgagctggcg ctcgatatcg gccagcagcg agctggcacc gaagcggaac
     2521 aggtcgggac ggagccagcg atcacccagc tcctctttca agagtcccag ccagtcgagt
     2581 gactgtttcg cggtccggat tccgcctgcc ggtttgagcc ccaccagaca tccggtccgc
     2641 tcccggtagt cccggatgga gcgcgccatc accaggccga cgggaagcgt ggcattgacc
     2701 gattccttgc cggtgctggt cttgatgaaa tccgcacccg ccatcatgca caccgcgctg
     2761 gcccgcgcga catcccgcaa cgtgcccagc tcgccggtgc cgagaatggt cttgaggtgg
     2821 gccgggccgg cggcgtcgcg gaaggcgcga acctcgtcgt agagcgcttt ccagctgccg
     2881 gtgagcacgt gccctcgggt aatgacgata tcgatctcgt cggcgccggc ttcgaccgaa
     2941 gtttcgattt cactcaaccg gagccggaag ggggtcaggc ccgccgggaa tccggtactc
     3001 accaccgcca ccgggacgcc gctgccctcg agggcgcgct gggcggtttc gaggaatgcg
     3061 tgatacacgc agaccgcagc caccgtgatg tcgagcgacc cggcgccgag cgcttccagc
     3121 agatcggctc ggaccggctg tcgggccttg gcgcagagac gtcgtacccg tccgggcgta
     3181 tcatcgccct gcagcgtggt gagatccatc agcgtcaccg cccggagcaa ccacgccacc
     3241 tgccagtcca gcttgacgct gcggcgggtg accagggtcg cggcgcggcg ctccaccgcg
     3301 ctccggttga tccgtatgtc acgaacccag gccaggtcga gcggaatccc cggattgcgt
     3361 tccaggcccg ccggtggatg caccggcgcc accgctcgcg agcccgcgga cgcggcgtag
     3421 cggggcttcc gggtgggggc agtcacatct cgaaactacc gtacgtttcg agccctgtca
     3481 cgcggtcgaa ggagtcgaag gaggtcgcaa tcggcaagga gatctggccc gcttcgaccc
     3541 cttcgaccgc cttcgaccgc cttcgaccag cttcaccccc acccgtaggg cgagaccaac
     3601 ttggtccgcc gggcgaccag ggtgcgattg cggaagagcc agatcagcac catccccgcg
     3661 atgaaaccac cggcgtgggc ccagaaggcc accccgccgc tttcctgggc cagcgccggc
     3721 agtccgccca ggacctgcaa caggaaccag tagcccaaca tgacccaggc cggcaccgcg
     3781 atggtggtga tgaagaaccc caggaacacc agcatgtgca cccgaaccct gggatagagc
     3841 acgatatagg cgcccatgat gccgctgatg gcacccgagg cgcccaccat cgggatggtg
     3901 ctggccggat tgacgaccat ttgcgccgcc gcggctccca ggccgcagat caggtaaaac
     3961 aggatgtagc gcaggtgccc catcgagtct tcgatgttgt tcccgaagac ccagagaaac
     4021 cacatgttgc cgatcagatg caaccacccg ccgtggagaa acatcgatgt gacgggtgtg
     4081 taccaggtcg gtgtgcctcc caggatgcag tccgccgccg ggccgagccg tactctggtt
     4141 cccgcttcga cctggtgcag cagctcgccc gggatcagac ccagggtgca gaccgagcgg
     4201 gtcagcgcgg gctcggaccc caaaccctgg atcaggaccc aggccagaac gttggcgatg
     4261 atgatcgcca cagtggcaac cgggggcaga acggtgggat tgtcgtcccg gtaggggaac
     4321 atggtccctg aatataggag accgggttct ctggcaactc aattgcgcca gccgtagact
     4381 tggaccatca actcagaggg ttgctgtcat gcaccccata gggcgacggg cgtttctggg
     4441 gctgaacgcg gccgcgctgg ccggcggcct gtggcctcgg cgcagcggat ttctgtcgca
     4501 ggggtccgac cggatggtgt accacctccg ttacgatgcc gacgctcagg gccggctggt
     4561 cgtgaccatg tcgccgccgg tgccgcacgt cggaccggtc gaactggtga tgcctcgggc
     4621 cattcccatg ggatacggga tggcccgtta tgacgatttc gtccgagggg tcagggcctg
     4681 gagtccgatg cgggagcagc tcccgattcg acgcctggat gggccccgct ggcgggtggg
     4741 gcgcccaggt gccagtatcc agtggattcg ctatgtggtt gacgtgaacc gcatggaaga
     4801 gagggtgttc gccgcctccg acgcgtccaa agcgcgggaa agctacctct gtctcctggg
     4861 ctattcggcg ctggggtatc tggacggaca ggaggccgta ccggtccgga tcgacgttcg
     4921 agggccggtg ggttggccgg ttttctccac cctgtcgccc acggggcagc cctggcccgg
     4981 accccaatcg ttcaatgcgt ccgatttcta cgcggccgcg gactctcaga tcctgctcgg
     5041 atcggcggtc cagatccggc agctcgccgg tactcgaccg ctgtttctgg cgggttacgc
     5101 cgaaggaccc gccgacctca acatggaagg cgccctgatc gagagtgcct tccggctggt
     5161 ggtggagtgg ttcggcggcg ccccctttcc ccactactcg gccatcgtgg agtacctccg
     5221 tcccgtctcg cccgaccacc ggtacggctt cagcatggag cacctggaca gctcgacgta
     5281 cttcatggag cgcggccggt cattgaatgc gcgatcctcg gccgaggatc gggagcggag
     5341 ccggttcaac tacgcgcatc atatcgccca ttcgtggatt cccaagcggg tctacggtga
     5401 agggtacttc ccgttccggt gggagctgcc gccggtgctc gataccatct ggttctcgga
     5461 gggcttcgcc cgctggattg cgatcgatgc gctggcggcc ggcgcggcgc cggccgagaa
     5521 gggagcatat cgcgcccgcc agctggagcg actggcccag accctgtcga cccttccggg
     5581 cctcttccgg gcgacgcccc tggtgtccct gtcgcgggtc ggctcgaccc agtacagcga
     5641 agacttccgc accggccagg cgctcttctg ccggggcgcc ctgctggcgg aggcggtgga
     5701 tgccaggatc cggcaaggct cggccggatc caaaggcctg cgcgacgcgc tccgcgccat
     5761 gctgcagtgg tcggcccgcg agcggcgcgg cttccggctc gacgagctgc cgcgcctggt
     5821 gggcgggccc gtcggagtgg acctgggacc ggtgttcgcg aagtggctcg cttgaaccca
     5881 cacgcaagac tcggatcgcc ctatgagccc gatgatcgcc tacgaggtga ccgtcgacgt
     5941 cgcgcccgag ctggtcgatc agtacatcgc ctatgtcctg atccgccacg taccggatct
     6001 gctggccacg ggctgcttcg tcggggccga gttcgcccag gccggcgagc acaagttccg
     6061 gcagcgctac ctggcgtttt cgcgtgagga tctcgaccgc tatctggccg agcacgcggt
     6121 gcgactccgg gaggactttg cccggcactt ccc
//
LOCUS       DASWKS010000322         3979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_902950, whole genome shotgun sequence.
ACCESSION   DASWKS010000322 DASWKS010000000
VERSION     DASWKS010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902950"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VGA78_09315"
     CDS             <1..858
                     /locus_tag="VGA78_09315"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HEX9894115.1"
                     /translation="VRFYFTNASNTRTFNLSFLGARMKLAGSDLGPFEREEWVESVVL
                     GPAERYVVQVRFDRPGRVVLQNQVRAIDHLFGRYFSEADTLGVIQVEGEPAGPLSGHD
                     RLRVDSATTREVREAVEGSKRLPARELLLMMEAQLPYVADRLMRKDSVFFNPVEWSGT
                     MPGMNWASTAREVRWILRDPATGQENMDVSWRFRVGDRVRLRLGNARTVFHGMQHPVH
                     IHGQRFLVLAVNEVPNDNLVWKDTVLLPAGGTVDLLLELSNPGRWMLHCHIAEHLHAG
                     MVMAFDVSP"
     gene            878..2302
                     /locus_tag="VGA78_09320"
     CDS             878..2302
                     /locus_tag="VGA78_09320"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894116.1"
                     /translation="MIRTMLAGVTATLATAVSLAGQTRSPGVQKYVSVEAPVIAITGV
                     KLIDGTGRPARENQTVIIRGNKIAEVGPTGQIKPPADARVIDGTGHTVIPGMVGMHDH
                     LFYTAGGGRAAQATYTAPRLYLASGVTTIRTTGASSAYGDLFVKQKVDGGQMPGPRVH
                     VTAPYLTGAANQSPTQAMVTSPEAARRFVRYWHDEGATWIKAYTDVRRAELKAAIDEA
                     HKLGMKVTGHLCSVSYQEAVALGIDNLEHGMLTATDFYADKPVDVCPTDAYGVVAKAD
                     PAGPTAKATISALVSKRIPMTSTLPVFEAFVPRRPVTDQRTLDAMAPEVRERYLQDRK
                     RIDAAGEDYLFSEAAFKRAMQFEREFVKAGGLMAAGVDPTGNGGALPGFGDQRGYELL
                     REAGFSPEEAVQIVSLNGAKVLGADQELGTIEAGKLADLMLLRGDLAADPAAIRNGVT
                     IFKDGVGYDPAKLIADVKGRVGVN"
     gene            2365..>3979
                     /locus_tag="VGA78_09325"
     CDS             2365..>3979
                     /locus_tag="VGA78_09325"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894117.1"
                     /translation="MHEEILGGGMSRIFRAEEVALGREVAVKVLPPEMVAGVSLERFR
                     LEILHAARYHHPNIIPVLTVGTLRGDRGEALPYFTMPFVRGESLRVALDREGRLPPVL
                     AVRIMRGVADALALAHEHGIVHRDIKPGNVLLAGGHALVTDFGISKALTQPAGDQAWI
                     TMPGTVVGTPAYMAPEQAAGDPNADHRVDIYSLGVVGYEMLTGRLPFESDVPHEIVAA
                     HLSEVPTPIHTSNPDIPLALSRVVMRCLAKSPGDRWQAARELVDALDCLPLSGTQVAS
                     EAPPRSLWARVRAPVFAAIALVAVAATVAIGRGLVLGRDAIRSLAVLPMEIVGDTTTA
                     LVFARGFQEELNHELQQIPGLRVALAPPDAMITGVGRRQIGDALGVEHLITSSIRPFG
                     EGYRVEVQLMRVAGEQLRWSERFDVRRMRLDEEQERVARLVSERLLATDTLTGVTPLQ
                     RSRIPAAELAYIRGRAGMNRRTRAGVASAMAEFEQAIRLDPSHVRALTDLSSAYALYM
                     WYGYRGDLASYSMAARSLALAERAIALAPD"
BASE COUNT          630 a         1332 c         1386 g          631 t
ORIGIN      
        1 gtgcggttct acttcaccaa cgcctccaac acccgcacct tcaacctgtc cttcctcggc
       61 gcccgaatga agctggccgg gtccgatctg ggcccgttcg agcgggagga gtgggtcgaa
      121 agcgtggtgc tgggtcccgc cgagcgctac gtggtgcagg tgcggttcga ccggcccggc
      181 cgggtggtgt tgcagaacca ggtgcgggcc atcgaccatc tattcggccg ctacttcagc
      241 gaagccgata cgctgggcgt aatccaggtg gagggcgagc cagccggccc gttgagcggc
      301 catgatcggc tccgggtcga tagcgccact acccgggaag tccgcgaggc agtggagggg
      361 tcgaagcggc tcccggcccg ggagctcctg ctgatgatgg aggcccagct cccgtatgtg
      421 gccgatcggt tgatgcggaa ggactcggtg ttcttcaacc cggtcgaatg gagtggaacc
      481 atgcccggga tgaactgggc ctcgaccgcc cgggaggtcc gctggatcct gcgggacccc
      541 gccaccgggc aagagaacat ggatgtctcc tggcggttcc gggtgggcga tcgggtccgg
      601 ttgcggttgg ggaacgcccg cacggtcttc cacgggatgc agcacccggt gcacattcac
      661 ggccagcgct ttctcgtgct tgcggtgaac gaggttccca acgacaatct ggtctggaaa
      721 gacacggtgc tcctgccggc cggagggacc gtggatctcc tgctggagct ctccaatccc
      781 ggacgctgga tgctgcactg ccacatcgcc gagcacctgc atgcgggtat ggtgatggca
      841 ttcgacgtgt cgccgtgact caaccaggag ggaagcaatg attcggacca tgctggccgg
      901 cgtcacggcc actcttgcca ccgcggtatc actcgccggg cagacccggt cgccgggagt
      961 gcagaaatac gtctcggtgg aggcgccggt catcgcgatc accggggtca agctcatcga
     1021 cggcaccggg cgtccggccc gcgagaacca gaccgtgata atccggggga acaagatcgc
     1081 cgaggtcggt cccaccggtc agatcaagcc gccggccgat gcccgggtaa tcgacggcac
     1141 cggccacacc gtgattcccg gtatggtcgg gatgcacgat cacctgtttt acaccgcggg
     1201 cggcggacgg gcggcgcagg ccacctacac cgctccgcgg ctttatctgg cgtcgggggt
     1261 gaccaccatc cggaccaccg gcgcttcctc ggcctacggc gacctgttcg tcaagcagaa
     1321 ggtcgacgga ggccagatgc ccggtccccg ggtccacgtc actgcgcctt acctcaccgg
     1381 cgcggccaac cagagtccca cccaggccat ggtcaccagc cccgaggccg cgcgacgctt
     1441 cgtaaggtac tggcacgacg agggcgccac ctggatcaag gcatataccg atgtgcggcg
     1501 ggcggagctg aaggcggcca tcgacgaggc ccacaagctc gggatgaagg tcaccggcca
     1561 cctctgctcg gtgagctacc aggaagcggt ggcgctgggc atcgacaacc tggagcatgg
     1621 gatgctcacg gccaccgatt tctacgccga caaaccggtc gatgtctgcc cgaccgatgc
     1681 ctatggtgtc gtggccaagg ccgacccggc cgggcccacc gccaaagcca ccatcagcgc
     1741 gctggtctcc aagcggatcc ccatgacctc gaccttgccg gtgttcgagg cttttgtccc
     1801 ccggcggccg gtcaccgatc agcgcaccct cgacgcgatg gcgccggaag tccgagagcg
     1861 ctacctgcag gatcgcaagc ggatcgatgc ggccggcgag gattacctct tttccgaggc
     1921 cgcattcaag cgtgccatgc agttcgagcg cgagttcgtc aaggccggcg ggctcatggc
     1981 cgcgggcgtg gatccgaccg gcaatggcgg ggccctgccc ggcttcggag accagcgggg
     2041 ctatgagctg ctgcgcgaag ccggcttcag cccggaggag gcggtccaga tcgtcagtct
     2101 caacggcgcc aaggtcctgg gagcggacca ggagctcggc accatcgaag ccggcaagct
     2161 ggccgatctg atgctcctgc gcggcgacct cgccgcggac ccggccgcga tccgcaacgg
     2221 ggtgaccatc ttcaaggacg gcgtaggata cgatccggcc aaactgatcg ccgatgtgaa
     2281 gggaagggta ggggtcaact gacggaggtc ggtctggcgg atctgcgcga tcagattcag
     2341 gcggcgctgg gcgccgccta tcgcgtgcac gaggaaatcc tgggcggcgg tatgtcgcgc
     2401 atcttccgcg cggaggaggt tgcgctcggg cgggaggtgg cggtcaaggt gctgccgccc
     2461 gaaatggtcg cgggggtgag tctggagcgg ttccggctcg agatcctcca cgccgcgcgg
     2521 taccaccatc ccaacattat tccggtgctc accgtcggga ccctccgggg cgatcgcggt
     2581 gaagcgcttc cctatttcac catgccgttc gtccggggtg aaagcctccg ggtggcgctg
     2641 gatcgggagg gccggctccc gccggtgctg gccgtccgga tcatgcgtgg agtggccgac
     2701 gcgctggcgc tggcgcacga gcacggcatc gtgcaccgcg acatcaagcc cggcaacgtg
     2761 ctgctggccg gcggccacgc cctggtcacc gatttcggca tatccaaggc gctcacccag
     2821 cccgccgggg atcaggcctg gatcaccatg cccggcacgg tggtgggaac tccggcgtac
     2881 atggccccgg agcaggcggc cggcgatccc aacgccgacc accgggtcga catctactcc
     2941 ttgggcgtcg tcgggtacga gatgctgacc ggccgactgc cgttcgagag cgatgtgccg
     3001 cacgaaatcg tggcagccca tctgagcgag gtgcccaccc cgatccatac cagcaacccc
     3061 gacatccccc tggccctgtc gcgagtggtg atgcgctgcc tggccaagtc accgggcgat
     3121 cgctggcagg cggcgcgcga gctggtcgat gcgctcgatt gcctgccgct ctccggcacc
     3181 caggtggcga gcgaggcgcc gccccggtcg ctctgggccc gggtccgggc tcccgtcttc
     3241 gcggcgatcg cgctggtggc ggtggccgct acggtcgcga tcgggcgcgg cctggtgctg
     3301 gggcgcgatg ccatccggtc gctcgcggtc ctgcccatgg aaatcgtggg cgacacgacc
     3361 acggccctgg tctttgcccg cggcttccag gaagagctca accacgagct gcagcagatc
     3421 ccgggattgc gggtggcgct ggcgccgccc gatgcaatga tcaccggggt cggccgccgc
     3481 cagatcgggg atgccctggg agtggaacac ctgatcacgt cgtcgatccg gccgttcggc
     3541 gagggctacc gggtggaagt acagctcatg cgggtggccg gcgagcagct gcgctggtcc
     3601 gaacggttcg acgtccggcg gatgcgcctg gatgaggagc aggaacgggt cgcgcgcctg
     3661 gtgagcgaac ggctgctcgc caccgacacg ctgaccgggg tcacgccgct ccagcgatcc
     3721 cggattccgg cggccgagct ggcgtatatc cgcgggcggg ccgggatgaa ccgccgcacc
     3781 cgggccgggg tcgcgtcggc catggccgag ttcgagcagg ccatccggct cgatccctcc
     3841 catgtccggg ccctgaccga cctgtcctcg gcctacgctc tctacatgtg gtacggctac
     3901 cggggcgatc tcgcctccta ctccatggcc gctcgctcac tggccctggc cgagcgtgcc
     3961 atcgcgctgg cgcccgaca
//
LOCUS       DASWKS010000323         4279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3478093, whole genome shotgun sequence.
ACCESSION   DASWKS010000323 DASWKS010000000
VERSION     DASWKS010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3478093"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..1365
                     /locus_tag="VGA78_09330"
     CDS             118..1365
                     /locus_tag="VGA78_09330"
                     /inference="COORDINATES: protein motif:HMM:NF033550.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HEX9894118.1"
                     /translation="MHDTDLYARILGIGAPWQVEQVELRLEAGDVLVRVGRDGTVLQC
                     PTCGAPVSGYDRRERRWRHLDTCQYRTVVIAEIPRVQCPRHGVQQIPVPWAEPGARFT
                     ALFEALVIDWLQVASLAAVARQLRLSWDEVDGIQARAVQRGLARRRPLSLTHVGVDET
                     SFRKRHEYVTVVSNLQTSRVVHVEDQHEAASLAGFYAGLTRAQRAALKVICMDMWRPY
                     IAATRRWVPDAERKIAFDKFHVAQRLGDAVDRVRRREHHQRRAAADHRLTGTRYWWLT
                     NPASMDAQRWRAFAPLRQSTLKTARAWALKQLAMSLWRFRTRAWAAKAWKRWLAWALR
                     CRLEPMRKVARSIRKHLEGILNAIVAGVTNARAEALNTQIQRLKRMACGFRSRQRFRH
                     AIYFHLGGLDMYPGTLQATHSKA"
     gene            1516..1767
                     /locus_tag="VGA78_09335"
     CDS             1516..1767
                     /locus_tag="VGA78_09335"
                     /inference="COORDINATES: protein motif:HMM:NF021474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6364 family protein"
                     /protein_id="HEX9894119.1"
                     /translation="MRTTVRLDEALLRQAKEYAARTGRTLTSVIEDALRGLLARRGKG
                     RVRERVRLPTYAGKGLQPGVDLDDTAELLDLMDRGDAAG"
     gene            1754..2185
                     /locus_tag="VGA78_09340"
     CDS             1754..2185
                     /locus_tag="VGA78_09340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9894120.1"
                     /translation="MRLVDVNVLVYSFRADAPDHRKYAVWLNEQVNSDESFGVSDLIL
                     SGFLRIVTHPRIFTPPTPLPVALTFAEGYRSVPAAIPIAPGVRHWDIFTRLCREATAR
                     GNLVPDAWLAALAIESGSELITTDRDYARFPGLRWRHPLEE"
     gene            2243..4087
                     /locus_tag="VGA78_09345"
     CDS             2243..4087
                     /locus_tag="VGA78_09345"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX9894121.1"
                     /translation="MPSRWIVLPLFVLHTGTTAAQPPYRHFAEAVDVRAGRSQPVLGY
                     TLRVDSTDLSSVRVELRIRNAPDTLRLAMVTHPEYDDRYWRYVEAAEVTAPNGGSITT
                     LDSTLWRVVAPGGESTVRYRVRLPNEGPRRAGWRPFLAPTGGLIGGPHTLMYVVGATL
                     APAHVTLELPAGWDVATGLTPTADPRTFFAPSAFVLTDSPMLVGRLRSWRFGVDGVPH
                     RVVYWPLPDATPFDTAAVVDGLTRLARQAETFFGRLPYREYLFQLQDGGLGSLEHMNS
                     VSLGARSVKLAEDPTGFFAEAAHEYFHTWNLMRIRPVEYGDVSYRTPPRSRGLWWSEG
                     LTIYYADLLLRRAGLPVFDSTRVSHLEGVIGRYLSRPGNAHFSAESVSVVAYGGGPGA
                     LGDYDASTHLQGEVLGTMLDFIVRDATSGRRTLEDVMRLMLDRFSGERGFTGAGVERA
                     IADVCGCTVRSFFDRHVRAGNPVDFNRYLGLVGLRAQVSRVPSTDREGKPVPDLRVFA
                     ADLPGGGARLILTDPGSAWGRAGLHSGDRIRAVNGAPVADATAFRELRNRMRLGDSVR
                     VEVERSRGRRVTATVVLAGFDRPVVRIAEITGASDRARRLRAAWLAGQ"
BASE COUNT          645 a         1390 c         1500 g          744 t
ORIGIN      
        1 gcctgccggc ccgctaaacg gattgtgaaa gccactgacg attgacaatt gaggcgcttc
       61 aggctttcgg gtgggtgaag ggtaagcagg tgtcagctcc gaaggtatgt tcggagcatg
      121 cacgataccg atctctacgc ccgcatcctg ggaattggag ccccgtggca ggtggagcag
      181 gtggaactgc ggctggaggc cggcgacgtt ctggtgcggg tcggtcggga tggaacggtg
      241 ctgcagtgcc cgacctgcgg ggcgccggtc tcgggctacg accgccggga gcggcgctgg
      301 cgacatctgg atacgtgcca ataccgcacg gtggtgatcg ccgagatccc gcgcgtgcag
      361 tgcccccgcc atggggtgca acagattccg gtcccgtggg ccgaacccgg ggcgcggttc
      421 accgcgctct tcgaggcgct ggtcatcgat tggctgcagg tggccagcct ggcggcggtc
      481 gcccggcagc tgcggctcag ctgggatgaa gtcgacggca tccaagcccg ggccgtgcag
      541 cggggcttgg cgcggcgacg gccgctgtcg ctgacccacg tcggcgtgga cgagacgtcc
      601 tttcgcaagc ggcacgagta cgtgacggtc gtgagcaatc tccagacgag tcgggtggtg
      661 cacgtcgagg atcagcatga agcggccagc ctggccggct tctatgcggg gttgacccgg
      721 gctcagcggg ccgccctcaa ggtgatctgc atggatatgt ggcggcccta tatcgcggcc
      781 acgcgccgtt gggtcccgga cgccgagcgg aaaatcgcct ttgacaagtt ccacgtcgcc
      841 cagcggctgg gcgatgcggt cgaccgggtg cggcgccggg agcaccacca gcggcgcgcc
      901 gccgcggacc atcggttgac cggcacccgc tactggtggt tgaccaatcc ggcgtcgatg
      961 gatgcccagc ggtggcgggc cttcgcgccg ctgcggcaga gcacgctgaa gacggcccgg
     1021 gcgtgggccc tcaagcaact ggccatgtcc ctctggcgtt ttcgaacccg ggcctgggcg
     1081 gccaaggcct ggaagcgctg gctcgcctgg gcactacgct gccgcttgga gccgatgcga
     1141 aaggtggctc ggtcgatccg gaaacacttg gaggggatcc tcaacgcgat cgtggcgggt
     1201 gtcacgaacg cccgcgccga ggccctgaac acccagatac agcgcctgaa gcgaatggcc
     1261 tgcggcttcc gcagtcgcca gcgtttccgt cacgcgatct acttccacct gggaggcctg
     1321 gacatgtatc ccggaacact tcaggcaacc cactcgaaag cctgaagagc cctttttgtt
     1381 tttgtgttgg agtgggaggg ggtaaaacaa agagggaccc gttcgatccg ttgcatccga
     1441 agtatccgcc ccaacctttg atcctcgatg ccggggcact tgacatattt atgtcagatg
     1501 catatgtatt gatgcatgcg cacgacagtc cggctcgacg aagcgctgct ccgccaggcc
     1561 aaggagtacg cggcccgaac cgggcgaacc ctgacctccg ttatcgagga cgccctgcgc
     1621 ggactgctgg cgcggcgtgg gaagggtcgg gtgcgagagc gggtccgcct gccaacctac
     1681 gcggggaagg gcctgcagcc aggcgtggat ctggacgaca cagccgagct cctcgatctg
     1741 atggaccgcg gcgatgcggc tggttgatgt caatgtgctg gtctattcct tccgtgccga
     1801 tgcacccgac catcgcaagt acgccgtctg gctcaatgag caggtgaact cggacgaatc
     1861 gttcggagtc tcggacctga tcctctccgg atttctgagg atcgtcactc atccccggat
     1921 cttcactccg ccaactccgc tcccggtggc cctgacgttc gccgaggggt atcgttccgt
     1981 gcctgccgcc attccgattg cgcccggggt tcgacactgg gacatcttca cccgcttatg
     2041 tcgcgaggcc accgctcgcg gcaacctggt tccggatgcc tggctggccg ccctggcgat
     2101 cgaatccggc agcgagttga tcaccaccga ccgggattac gcgcggtttc cgggactgcg
     2161 gtggcgccat ccgctggagg agtaggctca acctccccgc cccgggcggc atcatagagg
     2221 agccacttcc caaggctcgg ccatgccctc acgctggatc gtcttgccac tgttcgtcct
     2281 tcataccggc accaccgcgg cccagccgcc ctaccgccac ttcgcagagg ccgtcgacgt
     2341 acgggccgga cgctcgcagc cggtgctcgg gtacaccctt cgagtggatt ccaccgacct
     2401 ctcctccgta agggtcgagc tccggatccg gaacgcccct gacacgctgc ggcttgcgat
     2461 ggtgacccac ccggaatacg acgatcgcta ctggcgttac gtcgaggcgg ccgaggtgac
     2521 ggcacccaac gggggcagca tcacaacgct ggacagcacg ctctggcggg tggtggctcc
     2581 cggtggcgag agcacggtcc gctatcgggt ccggctgcct aacgagggcc ctcggcgcgc
     2641 cggctggcgg ccgttcctgg cgccgaccgg cgggctgatc gggggaccgc acacgctgat
     2701 gtacgtggtc ggcgcgacgc tcgctccggc ccacgtgacc ctcgagctcc ccgccggctg
     2761 ggacgtggcc accgggctca ctcccaccgc tgatccccgc accttcttcg cgcccagtgc
     2821 gttcgtgctg accgattcgc cgatgctggt ggggcggctc cggagctggc ggtttggggt
     2881 ggacggcgtg ccgcatcggg tggtgtattg gcccttgccc gacgcgaccc cgttcgatac
     2941 cgccgccgtg gtcgacggtc tgaccaggct ggcgcgccag gccgagacat tcttcggtcg
     3001 gttgccctac cgcgagtacc tgttccagct ccaggacggc gggctcggct cgctggagca
     3061 catgaactcg gtgagcctgg gagcccgaag cgtgaagctg gcggaagacc ccaccggttt
     3121 cttcgccgaa gcggcgcacg agtacttcca tacctggaac ctgatgcgga tccgcccggt
     3181 cgagtacggt gacgtgagct atcggacacc gccccgctcg cgcgggctct ggtggagcga
     3241 gggactcacc atctactacg ccgacctgct gctccggcgg gccgggcttc ccgtgttcga
     3301 ttcgacccgg gtgagccacc tcgagggggt catcggacgc tatctcagcc ggccgggcaa
     3361 cgctcacttc tcggccgaga gcgtgagcgt ggtcgcctac ggcggcggcc ccggtgcgtt
     3421 gggcgactac gacgccagca cccatctcca gggcgaggtg ctcggtacca tgctggattt
     3481 catcgtccga gacgcgacgt ccggccgccg taccctggaa gacgtgatgc ggctgatgct
     3541 ggatcggttc tcgggggagc gcgggttcac cggggcaggg gtcgagcgcg cgatcgcgga
     3601 cgtgtgcggc tgcacggtcc ggtcgttctt cgaccgccac gtgcgagccg ggaatccggt
     3661 cgacttcaac cgctatctcg gcctggtggg actgcgggcc caggtgagcc gggtccccag
     3721 caccgaccgg gagggcaagc cggtacccga tctgcgggtg ttcgcggccg accttcccgg
     3781 cggcggagct cggctcatcc tgaccgaccc tggcagcgcg tggggccggg ccggactcca
     3841 cagcggtgac cggatcaggg cagtaaacgg ggcgccggtc gcagacgcga cggcattccg
     3901 tgaactgaga aaccggatgc ggctgggcga cagtgtgcgg gtggaggtgg agcggtcccg
     3961 cggcaggcgc gtgacggcta ccgtggtgct ggccgggttc gaccggccgg tggtgcggat
     4021 cgcagagatc acgggcgcct cggaccgggc gcgccggttg cgcgctgcgt ggctggcggg
     4081 gcagtaggcc ccccgcggtc cgagagctgc ttggcgggat ctatgtccca gggttgaaac
     4141 ggatagttcg gatgccacgg atgcagcgga tcttttgtgg ggtcgctcgt tttccacctt
     4201 gggtccttga tgcccggggc gactttgcct cgccgcttgt gaggttgccg ccggggccgg
     4261 atggtgaggt acccccttc
//
LOCUS       DASWKS010000324         4550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1660725, whole genome shotgun sequence.
ACCESSION   DASWKS010000324 DASWKS010000000
VERSION     DASWKS010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4550
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660725"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VGA78_09350"
     CDS             complement(<1..409)
                     /locus_tag="VGA78_09350"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9894122.1"
                     /translation="MADRVTVVGAGLGGSLMAALLGREGRRVELVERRLDPRQTQAEE
                     GRSINLALSERGLYALAQVGLADRVLAHGVRLSGRMMHGLDGRLTFQPYGRGGQGINS
                     VSRTDLNRTLLDAAEGEAGVRVRFGLRCDEVDLD"
     gene            complement(402..1679)
                     /gene="kynU"
                     /locus_tag="VGA78_09355"
     CDS             complement(402..1679)
                     /gene="kynU"
                     /locus_tag="VGA78_09355"
                     /EC_number="3.7.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030429 - kynureninase activity [Evidence
                     IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HEX9894123.1"
                     /translation="MKATALSLEESFARGLDDADPLASYRHEFEQPRDHAGKPLVYLV
                     GNSLGLMPRAARALVDQELEDWARLGVDGHMQARTPWYSYHEVFRETGARLVGARPGE
                     VVMMNSVTINLHLMLVTFYRPTAERSKVLMEDQAFPSDAYAVATHLAARGIDPASRIV
                     TLRPRSGEAALRTEDIESVLQEQGPEIALVLLGGVNYYTGQLFELERIAQAAHRQGAL
                     VGYDLAHAAGNVALSLHDWEVDFAVWCSYKYLNAGPGAVGGCFVHQRHGRNTALPRFA
                     GWWGNDPATRFEMRAQFVPREGADGWQVSNPPILGMAPLRASLELFDRAGMAALRAKS
                     ESLTGYLEALLLGIPESPIRILTPSDPAARGCQLSLHVPGGRWLHDRLRAGGIVTDYR
                     EPDVVRMAPVPLYNSYHQVWRTAQAVRSALAHG"
     gene            complement(1676..2704)
                     /locus_tag="VGA78_09360"
     CDS             complement(1676..2704)
                     /locus_tag="VGA78_09360"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894124.1"
                     /translation="MNGTPELRIDLHTHILPERWPDLRERYGYGGFVALEHHAPCRAR
                     MVIDGTPFREISDNCWNPARRLEDCDRDGVRVQVLSTVPVMFAYWARPADGLDLSRLL
                     NDHIARVVADHPGRFIGLGTIPLQDSSLAVGELERCIRDLGFPGVQIGTHVNQHNLDD
                     PALSPVWEAAETLGAAVFVHPWDMVGKDRMARYWLPWLVGMPAETCLAICSLIFGGVL
                     ERFPRLRICFAHGGGSFAGTFGRIAQGFAARPDLVAVDNPIPPQEYLGRFFVDSLVHD
                     ADMLRLLLRLVGHDRVALGSDYPFPLGESPPGCLIDGMPDLSPELKRRLLAETALEFL
                     GRSRESFA"
     gene            complement(2713..3249)
                     /locus_tag="VGA78_09365"
     CDS             complement(2713..3249)
                     /locus_tag="VGA78_09365"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF009763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000334 - 3-hydroxyanthranilate
                     3,4-dioxygenase activity [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HEX9894125.1"
                     /translation="MPLMPPINIKRWVDEHRDLLKPPVGNKMIWQDSEFMVMVVGGPN
                     QRKDYHVEEGEEFFFQLEGDITLRIIEDGQVKDIPIREGEMFLLPPGIPHSPQRPPNT
                     VGVVIERRRQEGEHDHLRWFCEKCGQELHDAEFQLVDLGKQLKPIIEQFYATETMRTC
                     RHCGHVMQVPAPPAAAAK"
     gene            complement(3361..3870)
                     /locus_tag="VGA78_09370"
     CDS             complement(3361..3870)
                     /locus_tag="VGA78_09370"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HEX9894126.1"
                     /translation="MSRLLLWLLPLLADQPQSLPPWISWVAGTRTVTLNLTAGATSAN
                     GGWNFNGASHGDLTVTVPVGVKVVVDFVVNDASAPHSVGFVSPEESMPSSGDGVTFIA
                     PGAFSAPFVRGLGRGQTQRFSFTVDRAGGYWMFCGVPPHGVGGMWNHFVVSATAKGPS
                     VRTAKRKSS"
     gene            complement(3867..>4550)
                     /locus_tag="VGA78_09375"
     CDS             complement(3867..>4550)
                     /locus_tag="VGA78_09375"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9894127.1"
                     /translation="ETVPAVGVFTKVGFLYVLDRRNGTLITRSDAYVPQENLFKVPTR
                     SDSLVIAPGSAGGTNWSPGAYSPATRLTYTAALDWPMVTRADSGAVCPAGHLCVGGSL
                     GIGPQDTGRKQGTVAALDPATGKVRWQQWTRLPMIGGVLATAGGLLFAGQSDGSFDAW
                     DAGTGDHLWQFRTGAGCNAAPMTYQAQGRQFVVIACGGSFILRRSGLPSPSGGTLIAF
                     ALPEAPARR"
BASE COUNT          779 a         1608 c         1500 g          663 t
ORIGIN      
        1 tgtccagatc cacctcgtcg caccgcagac cgaagcggac ccggacgccg gcttcccctt
       61 ccgccgcgtc cagcagggtg cggttgagat cggtgcgcga gaccgagttg atcccctgcc
      121 ccccccgccc ataaggctgg aaggtgagcc ggccatcgag tccgtgcatc atccgacccg
      181 agagccgaac tccgtgggcc agcacccgat cggccagacc gacctgggcc agcgcataca
      241 ggcctcgctc cgacagcgcc aggttgatcg agcgcccttc ctcggcctgg gtctgacgcg
      301 gatccagccg gcgctccacc agttccaccc gccgtccttc gcgacccagc agcgcggcca
      361 tcagggaacc acccagtccc gcgcccacga ctgtgacgcg atcagccatg agccagcgcc
      421 gaccggaccg cctgggcagt gcgccacacc tgatggtagc tgttgtacag cggcaccggc
      481 gccatgcgga ccacatcggg ctcgcggtag tcggttacga tcccgccggc ccgcagccgg
      541 tcgtgcagcc accgaccccc cggcacatgc agcgacaact ggcaaccccg ggcggccgga
      601 tccgacgggg tcaggatccg aatcgggctc tccggaatac ccaggagcag cgcctcgaga
      661 tagccggtca acgattcgga cttcgcgcgg agcgcggcca tccccgcccg gtcgaacagc
      721 tccagcgagg cgcggagcgg cgccatgccc aggatgggag gattgctcac ctgccatccg
      781 tcggctcctt cgcgagggac gaactgggcc cgcatttcga accgggtcgc cggatcgttg
      841 ccccaccagc cggcgaagcg cggcagcgcc gtattccggc cgtggcgctg gtgcacgaag
      901 cagccaccca cggcgccggg accggcgttg agatacttgt aggaacacca gacggcgaaa
      961 tccacctccc aatcatgcag cgagagcgcg acgttccctg ccgcgtgggc caggtcgtag
     1021 ccgaccaggg cgccctgccg gtgggccgcc tgggcgatcc gttccagttc gaagagctgt
     1081 ccggtgtagt agttgacacc gcccaacagc accagggcga tctccgggcc ctgctcctgg
     1141 agcaccgact cgatgtcttc ggtgcggaga gccgcctcac ccgatcgggg gcgcagcgtc
     1201 acgatccggc tggcgggatc gatgccccgg gcggcgagat gggtcgcgac cgcatacgca
     1261 tccgacggaa aggcctggtc ctccatcagg accttggatc gctccgcggt gggccggtag
     1321 aaggtcacca gcatcaggtg caggttgatc gtgacggagt tcatcatgac cacttccccc
     1381 ggccgcgcac ccaccagccg ggccccggtc tcgcgaaaca cctcgtggta tgagtaccac
     1441 ggagtccggg cctgcatgtg tccatccacg ccaagccgag cccagtcctc cagctcctgg
     1501 tcgaccaacg cccgcgccgc ccggggcatc aggcccagcg agttccctac caggtacacc
     1561 agcggcttcc ccgcgtggtc ccgcggctgc tcgaactcgt gccggtagga cgccagcggg
     1621 tcggcgtcgt ccagcccgcg cgcgaaggac tcctccagcg acagagccgt cgccttcacg
     1681 cgaagctctc ccgcgagcgt cccaggaact ccagcgcggt ttccgccagc agccgccgtt
     1741 tcagctcggg cgacagatcc ggcatgccgt cgatcaggca tcccgggggc gactccccca
     1801 gcgggaaggg atagtcggag cccagcgcca cccgatcgtg accgaccagc cgaagcagca
     1861 gccgcagcat gtcggcatca tggaccagcg agtcgacgaa aaagcgcccc aggtattcct
     1921 gcggcgggat cgggttgtcg accgcgacca gatcggggcg ggccgcgaag ccctgcgcga
     1981 tccggccgaa ggttccggcg aacgagccgc cgccgtgcgc aaaacagatc cgcagccggg
     2041 ggaagcgctc cagcactccg ccgaagatca acgagcagat cgccaggcag gtctcagccg
     2101 gcatccccac cagccagggc agccagtagc gagccatccg gtccttgccg accatgtccc
     2161 aggggtgcac gaatacggcg gcgccgagcg tctcggctgc ctcccagacg ggggacaggg
     2221 ccgggtcgtc gagattgtgc tggttgacgt gggtcccgat ctgcacgccc ggaaacccga
     2281 gatcccggat acagcgctcc agctcaccca ccgccaatga ggagtcctgc agcggaatgg
     2341 ttcccaggcc gatgaaccgg cccggatgat ccgccactac ccgggcgata tgatcgttga
     2401 gcagtcggga gagatcgagg ccgtcggccg gccgggccca gtaggcgaac atcaccggaa
     2461 cggtggagag gacctgcacc cggaccccgt cccggtcgca atcctccagc cggcgcgccg
     2521 ggttccagca gttgtcgctg atttcacgga agggagtacc gtcgatcacc atgcgggccc
     2581 ggcagggcgc gtggtgctcc agcgccacga agccgccgta gccgtaacgc tcccgcagat
     2641 cgggccagcg ctccggaagg atgtgggtat gaaggtcgat ccggagctct ggcgtgccgt
     2701 tcaaggccgc ccctatttcg ccgccgccgc ggggggcgcg ggcacctgca tcacgtggcc
     2761 gcagtggcgg caggtgcgca tggtctcagt ggcatagaac tgctcgatga tgggcttgag
     2821 ctgtttgccc agatccacca gctggaactc ggcgtcgtgc agctcctgac cgcacttctc
     2881 gcagaaccag cggaggtgat cgtgctcgcc ctcctggcgc cgccgctcga tgacgacccc
     2941 gaccgtgttg ggcggccgct ggggcgagtg gggaatcccg ggcggcagga gaaacatctc
     3001 gccctcccgg atcggaatgt ccttcacctg cccgtcctcg atgatgcgga gcgtgatgtc
     3061 cccttccagc tggaagaaga attcctcccc ctcttccacg tgatagtcct tgcgctgatt
     3121 ggggccgccc acgaccatga ccatgaactc cgagtcctgc cagatcatct tgttgccgac
     3181 cggcggtttg aggaggtcgc ggtgctcgtc gacccagcgc ttgatgttga tggggggcat
     3241 gaggggcatt ggtcgttctc ccgtcgtgaa ccgcattggc gatggactat tcccggctgg
     3301 gctggctgat ccgaggtccg atacctaatc gtcacccggc gatcgccacg cgtcaatggc
     3361 tcaggatgat ttccgcttgg ccgtccgcac cgatgggccc ttggccgtcg cggagaccac
     3421 aaagtgattc cacatcccgc ccacgccatg gggcggcacg ccgcagaaca tccaatagcc
     3481 gcctgcccga tccaccgtga acgagaagcg ctgggtctgg ccccggccca gcccgcgcac
     3541 gaagggggcg ctgaaggccc cgggggcgat gaaggtcacg ccgtcgccgg acgacggcat
     3601 cgactcctcc ggggacacga aaccgaccga gtgcggggcc gaggcatcat tcaccacgaa
     3661 atcgaccacg accttgacgc cgaccgggac cgtcaccgtg agatcgccgt gcgacgcgcc
     3721 gttgaagttc cacccgccgt tggccgaggt ggctccggcg gtgaggttca aggtgaccgt
     3781 ccgggtgccc gcgacccacg agatccaggg cggcagggac tggggctggt cggcgagcaa
     3841 cggcaggagc cagagaagca accggctcat cggcgggcgg gcgcctccgg taaggcaaac
     3901 gcgatcaacg tccctccgct gggactgggc aggccggatc ggcgtaagat gaagctgccg
     3961 ccacaggcga tcaccacgaa ttggcggccc tgggcctggt aggtcatggg cgcggcgtta
     4021 cagcctgccc cggtccggaa ctgccagagg tggtccccgg tgccagcgtc ccacgcatcg
     4081 aagctgccgt cactctggcc cgcgaacagc aacccgcccg cggtggccag cacccctccg
     4141 atcatgggca gccgggtcca ttgctgccac cggaccttgc cggtggccgg gtccagcgcc
     4201 gcgaccgtcc cttgcttgcg acccgtgtcc tggggaccaa tacccagcga accgccgacg
     4261 cagagatggc ccgccgggca aacggcgccg ctgtccgccc gcgtcaccat gggccagtcg
     4321 agcgcggcgg tataagtcag tcgagtcgcc ggactgtagg cgccgggtga ccagttggtg
     4381 cccccggccg atcccggggc gatcaccagc gagtccgacc gggtggggac cttgaagagg
     4441 ttctcctgcg ggacgtaggc gtcgctccgg gtgatcaggg tgccgttgcg gcggtcgagc
     4501 acgtacagaa accccacctt ggtgaacact cccaccgccg gcaccgtttc
//
LOCUS       DASWKS010000325         7264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_162056, whole genome shotgun sequence.
ACCESSION   DASWKS010000325 DASWKS010000000
VERSION     DASWKS010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162056"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1382)
                     /gene="hutH"
                     /locus_tag="VGA78_09380"
     CDS             complement(<1..1382)
                     /gene="hutH"
                     /locus_tag="VGA78_09380"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF006871.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEX9894128.1"
                     /translation="MPSPVLLDGRSLTLQDLVGVARDATIPIGLSPAAVEALRESRAA
                     IQSAMDRGEAIYGINTGFGKLATVRIALGDLDRLQVNLIRSHAAGVGEPLPADVVRAM
                     MLLRANVLLQPTSGVRPELVEAVVGFLRAGLVPVVPSQGSVGASGDLAPLSHLALALI
                     GEGEVLSAEGSRRPTREALAAAGIAPFTLAPKEGLAFINGTQAQTAVLGLLMHDAWVT
                     WRSALGAAAMSLDALRGTPTPLDPRIHEARPHPGQRQAADLMRRLLVGSEIRESHREG
                     DPRVQDAYSLRCIPQVLGAVADAIGFAEAALTVELNASTDNPLVFGTEVVSGGNFHGQ
                     SIAQALDVLAIGLTTLQAIAERRIERLVNPDLSQGLPAFLTASPGLSSGFMMVQITAA
                     SLVAESRTLAYPASIGSIPTDANQEDFVPMGMAAAFKARRILANAQRVVGAEFYCAAQ
                     GLEFLRPLRSG"
     gene            complement(1389..4874)
                     /gene="tatC"
                     /locus_tag="VGA78_09385"
     CDS             complement(1389..4874)
                     /gene="tatC"
                     /locus_tag="VGA78_09385"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEX9894129.1"
                     /translation="MRNPTGEMPFLDHLEEFRLRILRSLAALVVGFGFGLWVVQRLQL
                     ISLLKTPIAPFLPDGKLVVLSPTDPIMIVLKLSFVVGLVLASPVIIWQTWAFLSPALY
                     EREKKAMVPALFVGLGLFLTGSALAWFLVVPQALAILLSFQAEAFNTLITYEKYFGFV
                     LQIVLAMGISFELPLLLVILTALGITTPATLGRFRRIAVILAFIAGAVLSPGADVFSM
                     VMMTLPLLLLYEVGLAGSVVVHRRRLRREAAAAAALGVWLLLAPGTAGAQAPPPRPGP
                     PPAVQDTTRPAGRLDSAAARRMGLPSAPSRSFPAPDSVMAALLERAGFLGTRFIADTA
                     TVAGADRRLRLGGNAMTERAGTILEAGAISYVETGCELVATGDPRLFDQGTVMVGGRI
                     RYDTCLERGVVDDALTSFAETGTNWFIRGNLAADSSSSRLFAAGSEITSCDLPVPHYH
                     FAAKEVKWVSKSVIVARPAVLYIRDVPIAWLPFIFQETKPGRRSGILVPQFGFNDIVR
                     PDPGYERQVTDFGYYWAINDYLDAQVRFDWYSNRYFRYTVAGQYRWLNRFVDGAVEYS
                     RQLEDGGSSATSLRWSHRQAFSITTNLNFNVNLSSNTRVLNNNAIDPFLNTQQLASDL
                     NLTKRFTWGTVTLGGRRRQTLGDDQISQTLPSLAITPKPFDLGQWGTWSPTMNFTNDL
                     NAQSKSFLLLERPGGGVDSVELTPRTRTTLFNLDTPLRFGSFTWRNSVVTRDVEETRP
                     TTVTVRIPDETTPDPTDSIAVIRRAANAFQSAIDWQTGINLPLLFRGSWKLTPNVGIT
                     NTTQGEFAIRNERTQGAWVTQGKRLTFGLAAAPTLFAFFGGIGPIERIRHSFQPIISW
                     NYAPKAGIPREYAEARSTTGQAPNLTSPATQTLNVSLTQNFEAKERRAPGDTSETALQ
                     RKYRILSINTSGLTYDFEQAKLPGRTGWTTATMTNTLLSDLLPGFSLSLTHHLWDGQV
                     GMEGTRFSPFLQNLAASVTITGATFRGIGAIFGLGEPRSATQRAADSAAAPALRPPDP
                     RMGIQQRTLRSSNLLTGARRPFSMNLNLSIDRNRALPGSSVAPPGRSSLRFSTAFSPT
                     RFWGVSWSTQFNITDREFESQVVSLQRDLHDWRAGFNFVRNPNGNFAFYFSIHLIELP
                     DIKADYNQTSITREP"
     gene            complement(4894..5685)
                     /locus_tag="VGA78_09390"
     CDS             complement(4894..5685)
                     /locus_tag="VGA78_09390"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894130.1"
                     /translation="MSVIHRRLGATGLAVLLGACATKGAVRRVEMEVVAVRTQMARQD
                     SARAAELARVIALQQRILDSLTAAQEALRQVRTEVSAELLNVQAQLVQVQELTGQGQR
                     RLSELRRQIDDRMQQVAPDTTAPPPAPDSAAPAPLSTATPDQLYQTSLQEVRRGSLGT
                     ARVGFQEFVRLYPTHALMPDVLYFMAETFTVQSGDSASYYYRQVVERFPRSERASTSL
                     FKMGVHAEQKGDQAGARAAWQRVVREYPRSEAADLARSRLAAQRP"
     gene            complement(5676..6239)
                     /locus_tag="VGA78_09395"
     CDS             complement(5676..6239)
                     /locus_tag="VGA78_09395"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9894131.1"
                     /translation="MRVAFLMVGSLALTLVGCSKREPEAAPTPTQGGPTTPAVPTTTP
                     PPPPPPSGPSCTEVVTAMANDVAVMIHFDTDQYDIRTGDAAILDTKAEILRSHPQVRI
                     RITGHADERYTDEYNLVLGTRRAEAAKDYLGRRGIDASRMETASLGETSPLDPGHTEE
                     AWAQNRRDEFTILAGRETLASHLAQCR"
     gene            complement(6270..>7264)
                     /locus_tag="VGA78_09400"
     CDS             complement(6270..>7264)
                     /locus_tag="VGA78_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894132.1"
                     /translation="LVPSPGSGVQARLYDVATGMVRNEGSARVETSGVGESRLAVHRL
                     ADEIVRWATGTPGIAATRILFVSGNRIWRIDADGYGPTAMTPAGRTAYSPVWSPDGER
                     FAFTDLGDGKGSVVVQTIGSQNRVVFPTTQATMNITPAFSPDGRRIAFSRAEQRGVYA
                     LHQGNVADLCCVERLTVGRFAENLNPTYSPDGRRIAFVSTRAGSPQIYVMSSDGTNQE
                     LLVPFDYGITGNSFAPEWSPDGLHLAFHREVGSGFQVMVFDVTSERVRQVSSEGRNED
                     PSWAPDGRHLIFASTRTGPRQLHVIDLETGKVRILATPGNAQLPAWSRRLDGAP"
BASE COUNT         1165 a         2376 c         2601 g         1122 t
ORIGIN      
        1 ccggagcgga ggggtcgaag gaactcgaga ccctgcgccg cgcagtagaa ctcggccccg
       61 acgacccgtt gggcgttggc cagaatccgc cgggccttga acgccgccgc catccccatg
      121 gggacgaagt cctcctggtt cgcatcggtc ggaatcgagc cgatgctggc cggataggcg
      181 agggtccggg actccgcgac caacgacgcg gccgtgatct ggaccatcat gaacccggag
      241 gagagtcctg gcgaggcggt gagaaaggcc gggaggccct gcgacaggtc ggggttcacg
      301 aggcgctcga ttcgccgctc ggcgatcgct tggagggtcg tgagcccaat cgcaagcaca
      361 tccagggcct gggcgatgga ttggccgtgg aaattccctc ccgagacgac ctcggtgccg
      421 aacaccagcg ggttgtcggt cgacgcgttg agctcgaccg tgagcgccgc ttcggcgaag
      481 ccgatggcgt cggcgaccgc ccccaacacc tgggggatgc aacggagact gtacgcgtcc
      541 tggacccgcg ggtcgccctc gcggtgggac tcgcgaattt cgcttcccac cagcaaccgt
      601 cgcatgaggt ccgccgcctg tcgctggccg gggtgaggcc tcgcctcatg aatccgtgga
      661 tcaagtggcg tcggggttcc gcggagcgca tccaaactca tagccgcggc gcccagagcg
      721 gatcgccacg tcacccacgc gtcgtgcatc aggagcccga ggacggcggt ctgagcctgg
      781 gtgccgttga tgaacgcgag gccttccttg ggggcgagcg tgaatggggc gatcccggcg
      841 gcagcaagcg cctcccgggt cgggcgccgg gatccctccg ccgacaggac ttccccttcc
      901 ccgatgagcg cgagcgccag atggctgagc ggcgccaggt cgccgctcgc cccgacgctg
      961 ccctgggacg gcaccacggg caccagcccg gcgcgcagga agccgaccac cgcttccacc
     1021 agctccggcc gcaccccgct ggtcggctgg agcaggacgt tggcgcggag cagcatcatc
     1081 gcccgcacga cgtcagcggg cagcggctcg cccacacccg cagcgtggct tcggatcagg
     1141 ttgacctgca gccggtcgag atcgcccagg gcgatccgca cggtggcgag ctttccgaag
     1201 ccggtgttga tgccgtagat cgcctcaccc cggtccatgg ccgactggat cgccgcccgg
     1261 ctttcccgca gcgcttcgac cgcagcaggg gaaagcccga tcgggatggt cgcatcgcgg
     1321 gctaccccca ccaggtcctg aagggtcagc gaccggccat ccagcaggac cggcgatggc
     1381 atcgcggctc agggctcccg ggtgatgctg gtctggttgt agtccgcctt gatgtccggc
     1441 agctcgatca gatgaatcga gaagtagaag gcgaagttgc cgttcgggtt ccggacgaag
     1501 ttgaacccgg cacgccagtc gtggaggtct cgctgcaggc tcaccacctg cgattcgaac
     1561 tcccggtcgg tgatgttgaa ttgggtgctc caggacaccc cccagaaccg ggtcggtgaa
     1621 aacgcggtgc tgaaccggag gctgctgcga ccggggggtg cgacgctcga gccgggcagg
     1681 gcgcggttcc ggtcgatcga gaggttgagg ttcatcgaga aggggcggcg ggcgccggtc
     1741 agcaggttgc tggagcggag ggtccgctgc tggatcccca ttcgcggatc ggggggtcgg
     1801 agagcgggag cggcggcgga atcggccgcc cgttgggtcg ccgaccgcgg ttccccgagg
     1861 ccgaagatag cgccgatgcc gcggaaggtg gcaccggtaa tcgtcacgct cgccgccagg
     1921 ttctggagga acggggagaa gcgggtcccc tccatgccga cctggccgtc ccacaggtgg
     1981 tgagtcaggg acaggctgaa cccggggagc aaatcgctga gcagcgtgtt cgtcatcgtg
     2041 gcggtcgtcc aaccggtgcg tccagggagc ttggcctgct cgaagtcgta ggtgagaccg
     2101 gacgtgttga tggacagtat ccggtacttc cgctgcaggg cggtttccga cgtgtcgccc
     2161 ggcgcccggc gctccttggc ctcgaagttc tgcgtgagcg agacgttgag cgtctgggtc
     2221 gcggggctgg tgaggttggg agcctgaccg gtggtgctgc gcgcctccgc atactcgcgc
     2281 ggaatgccgg ccttgggggc gtagttccag ctgatgatcg gctggaacga gtgccggatc
     2341 cgctcgatcg ggccgatgcc cccgaagaag gcgaacaggg tcggcgccgc cgcgaggccg
     2401 aacgtgagcc gcttgccctg ggtcacccag gcgccctggg tccgttcgtt gcggatggcg
     2461 aactcgccct gtgtcgtgtt ggtgatgccg acattgggcg tgagcttcca cgacccccga
     2521 aagagcaacg gcaggttgat gccggtctgc cagtcgatcg ccgattgaaa ggcgttggcc
     2581 gcgcggcgga tgaccgcgat cgagtcggtc gggtccggcg tggtctcgtc ggggatccgc
     2641 acggtgacgg tggtcggccg ggtctcttcg acgtcgcgcg tgaccaccga gttccgccag
     2701 gtgaagcttc cgaaccggag cggcgtgtcc aggttgaaga gcgtggtacg ggtccggggc
     2761 gtgagctcca ccgagtctac cccgccgccc ggccgctcca gcagcaggaa gctcttggac
     2821 tgggcgttga ggtcgttggt gaagttcatg gtcggcgacc aggtgcccca ttgcccaagg
     2881 tcgaagggct tcggggtgat cgcgagggaa ggcagggtct gggagatctg gtcgtcgccc
     2941 agggtctgcc gccgccgccc gcccagcgtc acggtccccc aggtgaagcg cttggtgagg
     3001 ttgaggtcgc tcgcgagctg ctgcgtgttg aggaacgggt cgatggcgtt gttgttcagg
     3061 acccgggtgt tgctgctcag gttgacgttg aaattcaggt tggtcgtgat gctgaacgcc
     3121 tgccggtggc tccaccgcag gctggtcgcg gacgagcccc cgtcctccag ctggcgactg
     3181 tactccacgg cgccgtcgac gaagcgattg agccagcggt actgcccggc caccgtatag
     3241 cggaagtacc ggttcgagta ccagtcgaac cggacttgcg cgtcgaggta gtcgttgatc
     3301 gcccagtagt agccgaaatc ggtgacctgc cgctcgtagc cggggtcggg gcggacgatg
     3361 tcgttgaacc cgaactgggg gaccaggatg ccggaacgcc gccccggctt ggtctcctgg
     3421 aagatgaacg ggagccaggc gatcggaacg tcgcgaatgt agaggaccgc cggccgggcg
     3481 acgatcaccg acttggagac ccacttcacc tccttggccg cgaagtggta gtggggcacg
     3541 ggcaggtcgc agctggtgat ctcgctcccc gcggcgaaga gccggctgga ggaagagtcg
     3601 gccgccaggt tcccgcggat gaaccagttg gtaccggtct cggcgaagct ggtgagcgcg
     3661 tcgtccacca cgccgcgctc caggcaggtg tcgtagcgga ttcggccgcc gaccatgacc
     3721 gtgccctggt cgaagagccg gggatcgccg gtggcgacca gctcgcagcc cgtttcgaca
     3781 taggaaatcg cgccggcctc gagaatagtc cccgcccgct ccgtcatcgc gttgccgccg
     3841 agccggagtc gccggtccgc tcccgccaca gtggccgtat cggcgatgaa gcgggtgccg
     3901 aggaaccccg cccgctcgag cagggccgcc atgaccgagt caggggccgg gaaggaccgg
     3961 ctcggcgcgg acgggagacc catgcgacgc gcggcggctg aatccaaccg gccggccggc
     4021 cgcgtggtgt cctggacggc cggcggcggc ccaggtctcg gcggcggcgc ctgggcgccc
     4081 gccgttcccg gggcaaggag cagccacacc ccgagcgccg ccgcggcggc cgcttcccgg
     4141 cgaaggcgac gccggtgcac gaccaccgag ccggccagtc ccacctcgta caggagcagc
     4201 agcggcaacg tcatcatcac catggagaac acgtcagccc ccggcgagag caccgcgccc
     4261 gcgatgaacg cgagaatcac cgcgatccgc cggaaccggc cgagcgtcgc cggggtcgtg
     4321 atgccgagcg cggtcaggat cacgagcagg agcggaagct cgaacgagat ccccatggcg
     4381 aggacgatct ggagcacgaa gccgaagtac ttctcgtagg tgatgagagt gttgaacgcc
     4441 tcggcctgga agctgagcag aatggcgagc gcctgcggca ccaccaagaa ccaggccagc
     4501 gcgctgcccg tgagaaagag acccaggccc acgaacagcg ctggaaccat ggccttcttc
     4561 tcccgctcgt agagcgccgg agagaggaag gcccaggtct gccagatgat gacgggcgag
     4621 gccaggacca ggcccaccac gaagctcagc ttgagaacga tcatgatggg gtccgtggga
     4681 ctcaggacca ccagcttccc atcgggcaga aagggcgcga tgggggtctt gaggagcgag
     4741 atcagctgga gccgctggac cacccagagg ccgaacccga atcccaccac cagggcggcg
     4801 agggagcgga ggatgcggag ccggaattcc tcgagatggt cgaggaacgg catctctccg
     4861 gtggggtttc gcatcgccgg cccgccgccg ggactacggc cgctgggcgg ccagcctgct
     4921 ccgggcgagg tcggctgctt cggaccgagg atactcccga accacccgct gccaggcggc
     4981 gcgcgcgccg gcctggtccc ccttctgctc ggcatgcacc cccatcttga agagcgaggt
     5041 cgaggcccgc tcactccggg ggaaccgttc gaccacctgc cggtaatagt aggacgccga
     5101 gtcccctgac tgcaccgtga acgtctccgc catgaaatac agcacgtcgg gcatcaacgc
     5161 gtgggtcgga tagagtctga caaactcctg aaagccgact cgcgcggtcc cgaggcttcc
     5221 acgccgcacc tcctggagcg aggtctggta gagctgatcc ggcgtggcgg tcgaaagcgg
     5281 cgccggcgcg gcggagtccg gcgctggggg cggtgccgtg gtgtcgggcg ccacctgctg
     5341 cattcggtca tcgatctggc gccggagttc gctcaaacgg cgctggccct gcccggtgag
     5401 ctcctgcact tgaaccagtt gggcctgcac gttgagcaac tcggcgctca cctccgtgcg
     5461 cacctggcgg agcgcctcct gggccgcggt gagcgaatcg agaatgcgct gctggagcgc
     5521 gatcacccgc gccaactcgg ccgcccgggc ggagtcctgg cgcgccatct gggtgcgcac
     5581 cgcgaccacc tccatctcca cccgccgcac cgcccccttg gtcgcgcagg cgccgagcag
     5641 gacagccagg cccgtggcgc cgagccgccg gtgaatcacc gacactgggc caggtgcgag
     5701 gcgagcgttt cgcgcccggc caggatggtg aactcgtccc gccggttctg cgcccacgct
     5761 tcctcggtgt gaccggggtc gagcggtgag gtctcgccca ggctcgccgt ttccatgcgg
     5821 gaggcgtcga tgccgcgccg gcccaggtaa tccttcgccg cctcggcccg gcgggtgcca
     5881 agcaccaggt tgtactcgtc ggtataccgc tcgtccgcgt gcccggtgat ccggatccgc
     5941 acctggggat gactgcggag gatctccgcc ttggtatcga ggatcgcggc atcgccggtg
     6001 cggatgtcgt actggtcggt gtcgaagtgg atcatcacgg cgacgtcgtt cgccatggcg
     6061 gtgacgacct ccgtgcacga gggcccgctc ggcgggggag ggggcggcgg cgtggtggtc
     6121 ggcacggccg gcgtggtcgg tccgccctgg gtcggcgtgg gcgcggcttc cggctccctc
     6181 ttgctgcacc ccacgagggt cagggcgagg ctaccaacca tcaggaaggc aacacgcatc
     6241 gcggatcact cctcatcaga ggtcgtggat caaggagccc cgtcgaggcg acgggaccat
     6301 gcgggcaact gcgcgtttcc gggggttgcg aggatcctca ctttgccggt ctcgaggtcg
     6361 atcacgtgga gctggcgagg gccggtccgg gtggacgcga agatcagatg gcgaccgtcc
     6421 ggagcccagg acggatcctc gtttcgtccc tcggaggaga cctgccgcac ccgctcggat
     6481 gtcacatcga ataccatgac ctggaacccg ctgccgacct cccgatggaa tgccaggtga
     6541 agtccgtccg gcgaccattc gggcgcgaac gaattgccgg tgatgccgta gtcgaacggg
     6601 accagcagct cctgattggt gccgtccgac gacatgacgt agatctgcgg cgacccggcg
     6661 cgtgtcgaga cgaacgcgat gcgccgtccg tcgggagaat aggtagggtt gaggttttcc
     6721 gcaaaccgtc cgacggtgag ccgctccacg cagcagaggt cggccacgtt cccctgatgc
     6781 agggcataga ccccgcgttg ttccgcccgg gagaacgcga ttcgccggcc gtcgggcgaa
     6841 aaggccgggg tgatgttcat ggtggcctga gtggtcggga acaccacccg gttctggcta
     6901 ccgatcgtct gtaccacgac cgatcccttc ccgtcgccca gatcggtgaa ggcgaagcgc
     6961 tccccgtccg ggctccacac cggcgaatag gcggtccggc ccgccggggt catcgccgta
     7021 ggaccgtacc cgtcggcgtc gatccgccag atccggtttc cggagacgaa gaggatgcgt
     7081 gtggcggcga tccccggtgt tcccgtcgcc cagcgcacga tttcgtcggc gagccgatgc
     7141 accgcgagcc ggctctcccc caccccgctc gtttccaccc gcgcagagcc ctcgtttcgt
     7201 accatcccgg tggccacgtc gtagagccgg gcctgcacgc cgcttcccgg cgaggggacc
     7261 agct
//
LOCUS       DASWKS010000326         3861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3140722, whole genome shotgun sequence.
ACCESSION   DASWKS010000326 DASWKS010000000
VERSION     DASWKS010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3140722"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..929)
                     /locus_tag="VGA78_09405"
     CDS             complement(12..929)
                     /locus_tag="VGA78_09405"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX9894133.1"
                     /translation="MDQQLDLADDAALAQVALEVTSSLRLGDVLRAVTAGLVSTLGVE
                     AAYLWLGSSAAPRGLELAARAGLDPGGPDPPDALARLTAPDEHLCTNDIPHDGSSGSP
                     EWLDANGLRAVAGYPLTFRGVRLGVLGIFSRRRLTTLAFRRLFLFAQQAAVAVQNALL
                     FTEVETLRERLSAENAYLRSEPGGDRSPEAIVGVSPAMHEVLRLVEQVASAESTVLLE
                     GETGTGKEVIATAIHQQSRRAGRVMVKLNCGAISPHLLESELFGQRRRSRRGMGTRPR
                     LPISGTSPTPCGPRPRSRKGWLSCRPGAE"
     gene            complement(943..1347)
                     /locus_tag="VGA78_09410"
     CDS             complement(943..1347)
                     /locus_tag="VGA78_09410"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX9894134.1"
                     /translation="MTEPTDSKTRTITAWVAQLIAAGILGMASFMKLTSSADSVALFT
                     TLGVEPWGRWAVGLWELITVVLLLRARTARLGGILGAVLMVGAVGAHLTKLGIAYQGD
                     PSLFVMALVALSATVTVILLRRSREPVGTAVS"
     gene            complement(1357..1587)
                     /locus_tag="VGA78_09415"
     CDS             complement(1357..1587)
                     /locus_tag="VGA78_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894135.1"
                     /translation="MLSCREVTQLVAGERLARAGLGTRLSLRLHLLMCQHCRKYVDQL
                     RQIGRAARQLADGDPKVAAAVRRVTERIRNLA"
     gene            complement(1571..2167)
                     /locus_tag="VGA78_09420"
     CDS             complement(1571..2167)
                     /locus_tag="VGA78_09420"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894136.1"
                     /translation="MGETVARTQGIRRRDPEVLDAVARECLPGLLRAAMAAGLPPDQA
                     EDVVQATFLVFLRRADDFDGRARCSTWLYGILLRKISETRRSLMREGLTDEIEDVMDS
                     RFRPDGWWQRPPAGPVRDLGRGEIRRMLGECLESVPDRQRLAFTLREVEGLSTEELCN
                     VLQVSANNLGVLLYRARNRLRECLESKGLEGSSDAELP"
     gene            2289..2678
                     /locus_tag="VGA78_09425"
     CDS             2289..2678
                     /locus_tag="VGA78_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894137.1"
                     /translation="MRHSLWSLAGTLVLVGAFPAGAAAQAMQAPQGKEVTVTGTVIDV
                     SCKFGQGLSGAEHKMCSEVCADKGIPLAILGNDGKLYIATTSAMPGDGQNGRLKPFAE
                     QEVTVRGKAFPAGGATAIQITSITKKA"
     gene            2675..>3861
                     /locus_tag="VGA78_09430"
     CDS             2675..>3861
                     /locus_tag="VGA78_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894138.1"
                     /translation="MTWWPLGGYRRPVASVASVVGFLGLVGVAYALAPTRVARPPAYV
                     ARLGAGAAEVRVSGRVRFVMNRDAPATLLPDSAPPRRGHGARLLFYEGRAAQPAGREV
                     LVVDSAGQLLRFDPTLRVERLGLDLGSRRIVSAVQGVTGGLWAVDAGGQVLRLDEEGG
                     VLEEQTTPFAYPSLAGDPASDAAWVVRSPRQFDFGFAPGPSPIAVRVDSAAATSGRSV
                     GNAIEPEHALLRTLANAGHLVVAGDTLFFAPFIRDEIVAFGPAGDTLWVATRGLPQST
                     VEPRFEIADKRPVIDYHPVNLGLTRGLDGHLYVLSTPGFTMSASRLDVFAVETGLLLR
                     SVALATPTPTLAADAEGRVFALDPVRLLGGTPAAERPLAPEVELPLLDGGRVALRDLR
                     GRVV"
BASE COUNT          616 a         1295 c         1327 g          623 t
ORIGIN      
        1 gggcatcgtc atcactcagc gccgggccga cagctgagcc agccttttct tgacctcggc
       61 cgtggtccac acggcgttgg cgaggtaccg gaaattggta agcgcggccg cgtacccatc
      121 cccctccggg atctgcgccg ctggccgaac aattcgctct cgaggaggtg gggagagatc
      181 gcaccacagt tgagcttcac catgacccgc ccggcccggc gggactgctg gtggatggcc
      241 gtggcgatca cctctttgcc ggttccggtc tcgccttcga ggaggacggt cgactccgca
      301 gaagccacct gctccaccag gcgcagcact tcgtgcatgg ccgggctgac gccgacgatc
      361 gcttccgggg accggtctcc acccggctcg gaccgcaggt aggcgttctc ggcgctcagc
      421 cgctcccgta aagtctcgac ctcggtgaag agcagcgcat tctgaacggc cacggcggcc
      481 tgttgggcaa agaggaacag ccgcctgaaa gcgagtgtgg tcaggcgccg gcgcgagaaa
      541 atgccgagca cgccaagccg aacaccccgg aacgtgagcg gatagccggc gaccgcacgc
      601 aggccgttgg catcgagcca ctcaggggaa ccgctggacc cgtcgtgggg aatgtcattg
      661 gtgcacaagt gctcgtccgg cgcggtcagc cgggccaatg catcgggcgg atctgggccc
      721 ccgggatcga gaccggcccg tgcggccagc tcgaggcccc gcggtgcggc gctgctgccc
      781 agccacaggt aggcggcctc gacgccgagg gtagacacca gtccggcggt aacggcccgc
      841 agcacgtccc cgagccggag gctggaggtc acttccagcg cgacttgcgc cagcgcggca
      901 tcatccgcga ggtcaagctg ctggtccatg gttgatcgca aactacgaga ccgcggtgcc
      961 gacaggctcc cgggaccgac gaaggagaat gacagttacg gtggccgaca gcgccaccag
     1021 cgccatcacg aagaggctgg gatcaccctg gtaggcgatt ccaagcttgg tgaggtgggc
     1081 tcccacggct ccgaccatca ggaccgctcc cagaatgcct cccaaccggg cggtcctggc
     1141 ccggagcagc agcaccacgg tgatcagttc ccagagtccg accgcccacc gtccccaggg
     1201 ctcgaccccc agggtggtga agagcgctac cgaatcggcg ctgctggtga gcttcatgaa
     1261 cgaggccatg ccaaggattc cggcggcgat gagctgtgcg acccaggcgg tgatcgtccg
     1321 ggtcttgctg tcagtcggtt cggtcatgcg gttctcctag gccaggtttc tgatccgctc
     1381 ggtcacccgg cggaccgccg cggcaacttt cgggtcgcca tcggccaatt gccgtgcggc
     1441 ccggccgatc tgccggagct ggtcgacata cttccggcag tgctggcaca tcagcaggtg
     1501 aagtcgcaac gacagtcggg ttcccagccc cgcgcgggcc aggcgctcgc cggcgacgag
     1561 ctgggtgacc tcacggcaac tcagcatccg aactcccttc caggcctttg ctctccaggc
     1621 attcccgcaa gcggttgcgg gcacggtaca acagtacgcc cagattgttg gcggatacct
     1681 gcaggacatt acagagctct tcggtcgaga gcccctcgac ttcccggagg gtgaaagcga
     1741 ggcgttgccg gtcggggacc gactccaggc actcacccag cattcggcgg atctcgcctc
     1801 ggcccagatc ccggacggga ccggccggag ggcgctgcca ccagccatcc gggcggaagc
     1861 ggctgtccat tacatcctcg atctcatcgg tgagcccctc ccgcatcagc gagcgacgcg
     1921 tttccgagat cttccggagc aggattccgt acaaccaggt cgagcaccgg gcgcggccgt
     1981 cgaagtcgtc agcgcggcgc aggaagacca ggaaggtggc ctggacgaca tcctccgcct
     2041 gatcgggtgg caagcccgcg gccatggcgg cccgcagcag cccgggcagg cactcccgcg
     2101 cgacagcatc gaggacttcc ggatctcggc gccgtatccc ctgggtgcgt gcaacggtct
     2161 cccccatcag caacccgctt ccgcgtgaac gtaagaatcg tccggtgagc tgcaaccacc
     2221 aacgtcgccg ggcccgccgg gctcgagacc gttggaccga gccaccttca actcacggag
     2281 attcatctat gcgtcactca ttgtggtccc ttgccggaac gctggtcctg gtcggcgcgt
     2341 tcccggccgg ggcggccgcg caggccatgc aggctcccca gggaaaggag gtcacagtca
     2401 cggggacggt tatcgacgtc agctgcaagt tcggccaggg gctctccggc gcggaacata
     2461 agatgtgttc ggaggtctgc gctgataagg ggatcccgct ggcgatcctg ggcaacgacg
     2521 gcaagctgta catcgcaact acctcagcga tgcccggcga tggccagaac ggacggctca
     2581 agcccttcgc ggagcaggag gtcaccgtac ggggcaaggc tttccccgcc ggcggagcaa
     2641 ccgccatcca gatcacctcg atcacgaaga aggcatgacc tggtggccgc tgggtgggta
     2701 ccggcgccct gtcgcctcgg tggcgagcgt cgttggattc ctcggcctgg tgggggtcgc
     2761 gtacgcgctg gcccccacca gggtggcccg tccaccggcg tatgtggcac gactcggggc
     2821 gggggccgcc gaggtgcggg tcagtggtcg ggtccgcttc gtgatgaacc gagatgcccc
     2881 tgcgacgctc ctgccggatt cggcccctcc gcgacggggc catggcgccc gactgctctt
     2941 ctacgaggga cgagccgccc agccggctgg ccgggaggtc ctggtggtgg actcggcggg
     3001 gcaactcctc cgcttcgacc cgaccctccg ggtggagcgg ctgggtctgg acctggggag
     3061 caggcggatc gtgtccgcgg tacaaggggt cacaggcggg ctctgggcgg tagatgccgg
     3121 cggccaggtc ctccggctcg atgaggaggg aggcgtgctg gaagagcaga ccactccgtt
     3181 tgcctatccc tcgcttgccg gtgacccggc gagcgacgcg gcgtgggtgg tgcggagccc
     3241 ccgccaattc gatttcgggt ttgcgccggg accgtctccg atcgcggtaa gggtcgacag
     3301 cgccgcggcg acgtcggggc ggtcggttgg caatgcgatc gagcccgagc acgccctgct
     3361 ccgcaccctc gccaatgcgg ggcacctggt cgtggcgggt gatacgctct tcttcgcgcc
     3421 gttcattcgc gatgaaatcg tggcgttcgg gccggccggc gatacgctct gggtcgcgac
     3481 ccgcggtctg ccgcagtcca cggttgagcc gcggttcgag attgccgaca agcgtcccgt
     3541 catcgattac cacccggtga atctcggact gacccgtggc ctcgatggtc acctctacgt
     3601 tctcagtaca ccgggcttca cgatgagcgc ttcccggctg gacgtgtttg cggtcgagac
     3661 cggtctgctg ctccgctcgg tggcattggc gaccccgacg cccacccttg cggccgacgc
     3721 cgagggacgc gttttcgcgc tggatccggt gcgcctcctg ggagggacgc ccgcggccga
     3781 acgacctctc gcgcccgagg tggagctccc cctgctggat gggggcaggg tggcgttgcg
     3841 cgatttgaga gggcgggtgg t
//
LOCUS       DASWKS010000327         7957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3480776, whole genome shotgun sequence.
ACCESSION   DASWKS010000327 DASWKS010000000
VERSION     DASWKS010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7957
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3480776"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /gene="purH"
                     /locus_tag="VGA78_09435"
     CDS             <1..285
                     /gene="purH"
                     /locus_tag="VGA78_09435"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287218.1"
                     /note="involved in de novo purine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEX9894139.1"
                     /translation="RDEMAIGIGAGQMSRVDASFLAVHKARLHGHDTRGAVLSSDAFF
                     PFADGLDQAAAAGISAVIQPGGSVRDEEVIAAANRRGMAMVFTGRRMFRH"
     gene            320..2629
                     /locus_tag="VGA78_09440"
     CDS             320..2629
                     /locus_tag="VGA78_09440"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEX9894140.1"
                     /translation="MDTQTKDVSSPPYGWAAVTAVVVLAVYIATLGPTIAFWDTAEYI
                     AAAKVLGIPHPPGNPLFVVVAHVFGLLPLAGEYAARINLFAAVTAGATSGIWFLVADR
                     WLRNVVAWRPARLAAAFAGTLAGATMWTVWNQSTVNEKVYTLSLLSMSLVLWIAVHWG
                     DDVPGPHRDRWLVLIAYLITLSSTNHMMGVLAAPAVAVYVLWTDWREAIRPWVVLLGW
                     LVLIAVSGAWTEIITGSSTGMVVGVVTAGLLVWSLLKDAKNPVLWLGIVAVVVGISLN
                     YLFLPIRAAHFPPINEGEPTTWQALLDVLNRVQYAKPPVTERQADFISQLGNYWQYWS
                     WQAARDWGGASAIATALITALGLVGLWTLIRRDPRAGIAALALLGTLTVGLIFYLNFK
                     YGFSQHPDQPDLPREVRERDYFFLCSFSYFGTLVAIGLGSLMEAMTGLFRGRPEPSRW
                     IFASPVLLLGFIPLLGNATTASRADETTPRDWAIDLLQSVEPYAILITAGDNDTFPLW
                     FAQEVQGVRRDVILANLSLLNTEWHLKQVRRRKVDRFDPARAASVWREADTTRTLPLG
                     SGPDSVSQSGPWRYPEEPALSLSEMELDSLPEIARSPEQRTIAANGVQIRLGEDYLQR
                     SDIAVILLIRDNLGKRPIYFSWTTGPFPDQTLGLTPYLVSEGLARRLHPGPVETTGSI
                     VLSQGMGFVDRARTNKLLWDQYHWQSVARPRPRGWVDTPSVSILQIYAIVYGGMAETY
                     RQLGDSTLAARADSVAQAVIQGLRGMEVP"
     gene            2683..2769
                     /locus_tag="VGA78_09445"
     tRNA            2683..2769
                     /locus_tag="VGA78_09445"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2717..2719,aa:Ser,seq:tga)
     gene            3003..3419
                     /locus_tag="VGA78_09450"
     CDS             3003..3419
                     /locus_tag="VGA78_09450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894141.1"
                     /translation="MRRILGHGAIALAVIGGCAPTEPSAPLPDGAIPFAPPAEYATWF
                     ERTEGCAAISGRFTAIQWLVVPGVETFNTDQGLKVGMWARRGDHQVIIIAGNYRDHEM
                     VVRHEMLHSLIGERGHPAEFFEQRCHLTWETWTQAE"
     gene            complement(3586..4695)
                     /locus_tag="VGA78_09455"
     CDS             complement(3586..4695)
                     /locus_tag="VGA78_09455"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894142.1"
                     /translation="MRISGARVGRMVHKELRQMFRDIRMRGLIFVAPLIQLVVFGYAV
                     STDVRQVPTFVVDYDRTPASRQLVDWITASGYFRVSGVSDRSGDLRAALEDRSATVAL
                     EIPRGYADDVAAGRAAAVQVLVDGTDSNTGNIALSYIVRIVQRAGADMVRAPAGVSLE
                     ARAWYNPALESRVYNVPAVMGLLLLLITMLLTALGVVREREIGTWDQLLVSPVSATEL
                     MLGKVIPVALVGLLDLVLVSTAAILWFQIPLRGSPLVLLAAALPFLIAGLSIGLIIST
                     LSNTQQEAFMSSFLVLLPALIFSGFMFPVSSMPQAFQHATLLNPVRHFLVVVRSVFLK
                     GTGFADHWEQYLALYAMAGAGLWFGVSRFRRMVGA"
     gene            complement(4692..5804)
                     /locus_tag="VGA78_09460"
     CDS             complement(4692..5804)
                     /locus_tag="VGA78_09460"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894143.1"
                     /translation="MISPTRLGAIARKELLQLRRDVRSLILAFLLPLVLTMVFGAAIS
                     LDVREIPFAVLDRDRSPASRELVEAFTASSYFTLLGELDRPADADRLLRRGEARLILS
                     IPPAYARDLSSGRGARVQALVDGSDANTATIAINYADAITAGVAARAAGAGQPSPITA
                     EARVWYNEALESARTIVPGLVAVIMAIIAAMLTALTIAREWERGTMEQLAATPVRRVE
                     VVVGKLVPYVAIGLIDLAMVTLLGVLVFDVPLRGNVLLLAGIALVFIIGMLSFGILIS
                     SALKSQLLATQIALMATYLPTFLLSGFIFAIANMPLVLRALSYLVPARYFVVVTRGIF
                     LKDVGLGVLWPQVLGLVIYAAVAFALAVRAFRKELA"
     gene            complement(5801..6739)
                     /locus_tag="VGA78_09465"
     CDS             complement(5801..6739)
                     /locus_tag="VGA78_09465"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9894144.1"
                     /translation="MPDTIIADGLTRRFGDFVAVDQISFGVRPGEIFGFLGPNGAGKT
                     TTIRMLTGLLPPTSGRAQVAGLDVAREPREVKRRIGYMSQLFSLYGDLTVEENIEFFG
                     GLYEVTGERWTARRDWVLENAGLGALRHRPTGTLPLGLKQRLALGCALIHEPSILFLD
                     EPTSGVDPISRRNFWALIGEFARRGTTVLVTTHYMDEAEHCDRLALMNRGRLIGLDTP
                     AGLRRSMTDPILAVTTANAPAAVRVVRELEGVRDVTMFGRVLHAVVENEGSARGAITT
                     RLGQAGIALSHLDRIEPSLEDVFAEWIRREGGAVAG"
     gene            complement(6732..7463)
                     /locus_tag="VGA78_09470"
     CDS             complement(6732..7463)
                     /locus_tag="VGA78_09470"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9894145.1"
                     /translation="MTTPHVVVEGLARSFGEVEAVRGVSFDVARGELFGIVGPDGAGK
                     TTLLRMLAGVMRPTSGDARIDGTSVVRDPERVKHDLAYMSQRFGLYTDLTVLENITFY
                     ADLYRVPRPERAARLEELWGFSGLGAFQGRLAGALSGGMKQKLGLCCALIHRPPLLLL
                     DEPTFGVDPISRRDLWLIVHDMVHGGTTVITSTAYLDEAERCDRVLLLHQGAALGMDT
                     PAALQAGSGSLEEAFIARVTEPAHA"
     gene            complement(7460..>7957)
                     /locus_tag="VGA78_09475"
     CDS             complement(7460..>7957)
                     /locus_tag="VGA78_09475"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX9894146.1"
                     /translation="LLQQVQLLERGARPEQVSAQRAGVVQAKAALAQVDATLSQAEVR
                     APFAGTVTRRQREPGEVISPGLPVVTISDPADRWVRIYVREEEIGRVRIGQAAEIRID
                     AFPDRVYQGRVTFIADEAEFTPRNVQTREERVKLVYRLKVRVVADTARDLKPGVPADV
                     RLSQP"
BASE COUNT         1357 a         2787 c         2540 g         1273 t
ORIGIN      
        1 cgcgacgaaa tggcgatcgg gatcggcgcc ggccagatga gccgggtcga tgcctcgttt
       61 ctggcggtgc acaaggccag attgcatggc catgacaccc ggggcgcggt gctgtcgtcg
      121 gacgcgttct ttccctttgc cgatggcctc gaccaggcgg cggccgcggg aatcagcgcg
      181 gtcattcagc cgggtggttc ggtgcgggac gaagaagtga tcgcggccgc caaccgccgc
      241 gggatggcaa tggtgttcac cggccggcgg atgtttcggc actagggacg tggtggtggg
      301 ccaccagtca gaaagcccga tggatacaca gacgaaagac gtttccagtc cgccctacgg
      361 atgggctgcc gtcacggccg tcgtggtcct ggcggtctac atcgcgaccc tgggccccac
      421 catcgcgttc tgggataccg ccgagtacat cgccgcggcc aaggtgctgg ggatccccca
      481 tcctccgggg aacccgctct tcgtggtggt ggcccacgtc ttcgggctgc tgccgctggc
      541 cggggaatac gccgcccgca tcaatctctt cgccgcagtc accgccggcg cgacctcggg
      601 catctggttc ttggtggccg accgctggct ccggaatgtg gtggcctggc ggccggcccg
      661 gctggccgcg gcctttgccg gcacgctggc cggcgccacc atgtggaccg tttggaatca
      721 gtcgacggtc aatgagaagg tctacaccct ctcgctgttg tcgatgtcgc tggtgctctg
      781 gatcgcggtg cactggggtg acgacgtccc gggaccccac cgcgatcgct ggctggtcct
      841 gatcgcctac ctgatcaccc tgtcctccac caatcacatg atgggcgtgc tggccgcgcc
      901 cgcggtggcg gtctacgtcc tctggaccga ctggcgcgaa gcgatccggc cctgggtcgt
      961 gctgctgggc tggctggtgc tgatcgcggt gtcgggagcc tggaccgaga tcatcaccgg
     1021 ctccagtacc ggcatggtcg tgggggtggt gacggccgga ttgctggtgt ggtcgctcct
     1081 caaggacgcg aagaacccgg tcctgtggtt aggcattgtg gcggtcgtcg tggggatctc
     1141 gctcaactac ctcttcctcc cgatccgggc ggcccacttc ccgcccatca acgagggcga
     1201 gcccaccacc tggcaggcgt tgctcgatgt gctcaaccgg gtccagtacg ccaagccgcc
     1261 ggtcaccgag cggcaggccg atttcatctc ccagttaggc aactactggc agtactggag
     1321 ctggcaggcc gcccgggatt ggggcggcgc ctcggccatc gccacggccc tgatcaccgc
     1381 cctggggctg gtgggcctct ggaccctgat tcggcgcgac ccgcgggccg gcatcgccgc
     1441 gctggccctg ctgggaacgc tgaccgtggg cctcatcttc tatctcaatt tcaagtacgg
     1501 cttctcccag catcccgacc agccggatct gccccgggaa gtgcgcgaac gagactactt
     1561 ctttctctgt tccttctcct atttcggcac cctggtggcg atcgggttgg gctcgctgat
     1621 ggaggcgatg accgggctgt tccggggtcg gcccgagccg tcccgctgga tcttcgcctc
     1681 gccggtgctg ctgctcggtt tcattccgct gctggggaac gcgaccaccg ccagccgggc
     1741 tgacgagacc accccgcgcg attgggccat cgacctgctg caatcggtcg agccgtacgc
     1801 catcctgatc accgcgggtg ataacgacac cttcccgctc tggttcgccc aggaggtcca
     1861 gggtgtccgg cgcgacgtca tcctcgccaa tctgtcgctg ctcaacaccg agtggcatct
     1921 caagcaggtt cgccgccgca aggtcgaccg gttcgacccg gcccgggcgg cctcggtctg
     1981 gcgcgaggcc gacacgacgc ggaccctccc cctcggttcg gggccggatt ccgtgagcca
     2041 aagcggacca tggcgctacc ccgaagagcc ggccctgagc ctgagcgaga tggagctgga
     2101 cagcctgccg gagatcgcgc gctcgcccga gcagcgcacc atcgccgcca atggcgtgca
     2161 gatccggctc ggggaagact atctccagcg gagcgacatc gcggtcatcc tgctgatccg
     2221 ggacaacctg ggcaagcggc ccatctactt cagctggacg accggcccat tccccgacca
     2281 gactctgggg ctcacgccct atctggtatc ggagggattg gcccggaggc tccaccccgg
     2341 accggtggag accaccggca gcatcgtgct gagccagggg atgggcttcg tggaccgggc
     2401 ccggaccaac aaactcctgt gggaccagta tcactggcag agcgtggcac ggccccgccc
     2461 ccgcggctgg gtggacaccc cgtccgtgtc catcctgcag atctacgcca tcgtgtacgg
     2521 cgggatggcg gagacctacc gccagctggg cgactctacc ctggccgctc gggccgattc
     2581 ggtggctcaa gccgtgatcc agggcctccg cggcatggag gtcccctagg ttcgacccat
     2641 cactattctt cactccgcat tctgcactct gcactgtcgc cgggcgtggt ggccgagtgg
     2701 ttgaaggcag cggtcttgaa aaccgccagc ggggagactc gctcgtgggt tcgaatccca
     2761 cccacgccgc ttcattcggt cggtcagtcg gtcagtcggt cagtcggtgc gtcggtccgt
     2821 cggtcggacg ggtatgtcgt gtccggccgg aaaccgggca tagcccgaag gccgaccgac
     2881 cgagcgacgg actcgttcca ccgacggacc gcccgaccga ctgaccgacc gactgccatg
     2941 gcataatgct ggcatttcct tgacaccgtc cgatacatcg acatccagga cggagatcgg
     3001 gaatgcggcg gattttggga catggagcta tagcgctggc ggtcattggc ggatgcgctc
     3061 cgaccgagcc gtccgcgccc ttgccggacg gggccatccc gtttgcgccc cccgccgagt
     3121 atgccacctg gttcgaacgt accgagggtt gcgccgcgat ttccggccgc ttcaccgcga
     3181 tccaatggct tgtcgtacct ggagttgaga ccttcaacac cgatcaaggt ctgaaggtcg
     3241 gaatgtgggc tcgtcgcggg gatcaccagg tcatcatcat cgccgggaac taccgcgatc
     3301 atgagatggt cgtgcgtcac gagatgctcc acagcctcat cggcgagcgg ggtcacccgg
     3361 ccgagttctt cgaacagcgg tgccatctca cttgggaaac gtggacccag gctgagtagc
     3421 cgacccaaca cctgtcgcac tctaacaaca gtcgaagcag tcgaagccgg tcgaaggtgg
     3481 tcgaagacgg ttcaaacaga aggggctagt tgcagggaac cgtcttcgac caccatgaac
     3541 ccccttcgac tccttcgacc gccttcgacc gccttcgacc gcagttcaag cccccaccat
     3601 cctcctgaac cggctcaccc cgaaccacag gcccgcgccc gccatcgcgt agagcgcgag
     3661 gtactgctcc cagtggtctg cgaatccggt ccccttgagg aagaccgacc gcaccaccac
     3721 caggaaatgc cgcaccgggt tgagcagcgt ggcgtgctgg aaggcctgtg gcatgctcga
     3781 taccgggaac atgaagcccg agaagatcag ggccggcagc agaaccagga agctcgacat
     3841 gaaggcttcc tgctgggtgt tggagagggt cgagatgatc aggccgatcg acaatcccgc
     3901 gatcagaaac ggcaacgccg ccgccagcag caccaggggt gagccgcgca gcggaatctg
     3961 gaaccagagt atggccgcgg tcgataccag caccaggtcc agcaatccca ccagcgccac
     4021 cggaatcact ttccccagca tcagctcggt ggcactcacc ggactgacca gcagttggtc
     4081 ccaggtcccg atctcgcgct cacgcaccac acccagcgcc gtcagcagca tggtgatgag
     4141 cagcaacagc aggcccatga ccgccggcac gttgtagact cggctctcga gcgcggggtt
     4201 gtaccaggcc ctggcttcca gcgacacccc ggccggagcg cggaccatgt cggccccggc
     4261 ccgctggacg atccgcacga tgtaactcag cgcgatattg ccggtgttgg aatcggtccc
     4321 gtccaccagg acctggaccg ccgcggctcg gcccgccgcc acgtcgtcgg cgtagccccg
     4381 cggtatctcg agcgcgacgg tggcactccg gtcttccagc gccgcgcgca gatccccgct
     4441 ccgatccgag actccgctca cccggaagta acccgacgcc gtgatccagt cgaccagctg
     4501 acgggaagcg ggggtgcgat cgtagtccac cacgaaggtg gggacctgcc gcacatcggt
     4561 cgacaccgcg taaccgaaca ccaccagctg gatcagcggt gccacgaaga tcagcccccg
     4621 catccggatg tcgcggaaca tctggcgcag ttccttgtgc accatccgcc ccaccctcgc
     4681 cccggagatc ctcatgccag ctccttccgg aaggcccgca ccgcgagggc gaacgccacg
     4741 gccgcgtaga tcaccaggcc cagcacctgg ggccacagca cgccgagccc cacatccttg
     4801 agaaagatcc cccgggtgac gaccacgaaa taccgcgccg ggaccaggta actcagggcc
     4861 cggagcacca gcggcatgtt ggcgatcgcg aagatgaatc ccgagagcag gaaggtcggg
     4921 agatacgtcg ccatcagggc gatctgggtg gccaggagct gggatttgag cgcggaagag
     4981 atcagaatcc cgaacgagag catcccgatg atgaatacca gcgcgatccc ggccagcaac
     5041 agcacgtttc cccggagcgg cacgtcgaac accagcacgc ccagcagcgt caccatcgcc
     5101 aagtcgatca agccgatcgc gacgtagggg accagcttgc cgaccaccac ctccacccgg
     5161 cggaccggag tggcggccag ttgttccatg gtgccccgct cccactcccg cgcgatcgtc
     5221 aaagcggtga gcatcgccgc gatgatcgcc atgatcacgg cgaccagccc cggtacgatg
     5281 gtccgggcgc tctccaacgc ttcgttgtac cagactctcg cttccgccgt gatcggggac
     5341 ggctggccgg cgccggcagc acgcgcggcg acgccggcag tgatggcgtc ggcatagttg
     5401 atcgcgatgg ttgcggtgtt ggcatcgctg ccgtccacca gggcctgcac ccgggctccg
     5461 cgcccgctgg agagatcgcg ggcgtacgcc ggcggaatcg acaggatcaa ccgggcttcc
     5521 ccgcggcgca gcagccggtc ggcatcggcg gggcggtcca gctcgccgag taacgtgaag
     5581 tagctcgacg cggtgaacgc ctcgaccagt tcgcggctgg ccgggctccg gtcccggtcc
     5641 agcaccgcga aggggatctc ccgcacatcc agggaaatgg cggcgccgaa taccatcgtg
     5701 agaacgagcg gcaacagaaa agccaggatg aggctccgga cgtcccgccg cagctggagc
     5761 agctccttac gggcaatcgc ccccaaccgg gtgggactga tcatccggcc accgcgccgc
     5821 cctcgcgccg aatccactcc gcaaacacat cttccagact cggttcgatc cgatccaggt
     5881 gagacaacgc gatcccggcc tgacccagcc gggtcgtgat ggcgccgcgc gcggaccctt
     5941 cgttctccac caccgcatgc agcacccggc cgaacatggt gacgtcgcgc acgccctcga
     6001 gctctcgcac cacccggacc gcggccgggg cattggccgt ggtgacggcc agaatgggat
     6061 cggtcatcga ccgccgcagc ccggcgggcg tgtcgagtcc gatcaaccgg ccccgattca
     6121 tcagcgccag ccggtcgcag tgctcggctt cgtccatgta gtgggtggtc accagtaccg
     6181 tggtcccgcg ccgggcgaat tccccgatca acgcccagaa gttccgccgc gagatcggat
     6241 cgaccccgga ggtgggctca tccagaaaca gaatcgacgg ctcgtgaatc agcgcgcatc
     6301 cgagggccag ccgctgcttg aggcccagcg gcaacgtgcc ggtcggtcgg tggcgcagcg
     6361 cgccgagacc ggcgttctcg agcacccagt cgcgccgcgc ggtccagcgc tcgccggtca
     6421 cctcatagag tccgccgaag aactcgatgt tctcctccac ggtcaggtcg ccgtagaggg
     6481 agaacagctg cgacatgtag ccgatgcggc gcttcacttc gcggggctcc cgggccacgt
     6541 ccaggcccgc cacctgggcc cggccgctgg tcggtggcag caaccccgtc agcatccgga
     6601 tggtggtggt cttgccggcg ccgttcggcc ccaggaagcc gaagatttcg ccgggccgca
     6661 cgccgaacga gatctggtcc accgcgacaa aatcaccgaa gcgacgggtc aggccgtccg
     6721 cgatgatcgt gtcaggcatg cgccggctcc gtcacccgcg cgatgaaagc ctcttccagc
     6781 gagccggacc cggcctggag cgcggccggg gtatccatcc ccagcgccgc accctgatgc
     6841 agcagcaaca cccggtcgca gcgctcggcc tcgtcgagat aggccgtgct ggtgatcacg
     6901 gtggtgccgc cgtgcaccat gtcatgcacg atcagccaca gatcgcgccg cgagatgggg
     6961 tcgacaccga aggtgggctc atccagaagc aggagcggcg gccggtgaat cagggcgcaa
     7021 cagagcccca gcttctgctt cattccgccg gagagcgcgc cggccagccg cccctggaat
     7081 gcccccagcc cgctgaaacc ccacagctcc tccagccggg ccgcgcgctc gggccggggc
     7141 acccggtaga ggtcggcgta gaaggtgatg ttctcgagga cggtgagatc ggtatacagg
     7201 ccgaatcgct ggctcatgta ggcgaggtcg tgcttcaccc gctccgggtc gcgcacgaca
     7261 ctggtcccat cgatccgcgc gtcacccgag gtggggcgca tcacgccagc cagcatccga
     7321 agcaacgtgg tcttccctgc cccatccgga cccacgatac cgaacagttc cccgcgggcg
     7381 acgtcgaacg acacacctcg aaccgcttcg acctcgccga acgaccgggc cagcccttcc
     7441 accaccacgt gcggtgtggt cacggctggc tcaatcggac gtccgccggg acccccggtt
     7501 tgagatcccg ggccgtatcc gccaccaccc gcaccttgag ccggtatacc agcttcaccc
     7561 gttcttcccg ggtctgcacg ttccggggcg tgaactccgc ctcgtcggcg atgaacgtca
     7621 cccgtccctg atacacccga tcggggaacg cgtcgatccg gatctcagct gcctggccga
     7681 tccggacccg gccgatctcc tcctcccgga catagatccg cacccagcga tcggccgggt
     7741 cggagatggt cactaccgga agccccggac tgatgacttc gcccggttcg cgctgtcgcc
     7801 gagttaccgt gccggcgaac ggggcccgca cttcggcctg gctcagggtc gcatcaacct
     7861 gcgccaatgc ggccttcgcc tgcaccactc cagcccgctg ggcggagacc tgttcgggcc
     7921 gggcccctcg ctccagcagc tgcacctgtt gcagtaa
//
LOCUS       DASWKS010000328        13921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_906058, whole genome shotgun sequence.
ACCESSION   DASWKS010000328 DASWKS010000000
VERSION     DASWKS010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13921
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906058"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1249
                     /locus_tag="VGA78_09480"
     CDS             <1..1249
                     /locus_tag="VGA78_09480"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894147.1"
                     /translation="LGADAVLEGSLRTAGNRLRIGVQFTNARDGIQLWSRRFDGSASE
                     VFAIEDQITRAVVEALRPQSDTPAHTLVRGPTANLEAYRLYLRGRQALNRRTEAAFEE
                     CIEHLASAAALDPRFAMVQVALAEAYLLLGVYGARPADEVIPQTRAAAERALELVPGL
                     AEALAARATVRAVYEWDWTEAERDFLAALQRHPVPASGRLWYANYLLVPLGRFAEARE
                     QLEEAQRLDPLSPSVSASLGQAALFGGDFEGAIAYHRTALELAPGFAPAHHFLGQALI
                     EAGRYQEAIATLERAAELSDRSPDVLPALAGARARAGAVDQAEALLRELADRSSDHYV
                     SPVAFAITLLGLGRTAEALDALDQAAAVRAPGLVWLAVRPTFAVLAAEPRYRALLDRL
                     GLNRTAPGAQPVTEPAGAGSKLR"
     gene            1227..1517
                     /locus_tag="VGA78_09485"
     CDS             1227..1517
                     /locus_tag="VGA78_09485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894148.1"
                     /translation="MLAPNCADRHQAFLRQVERQLIQRLEQLLPVPDVRFGMVQQGAE
                     CSVRQPGASLHPGEVIRSGRVAFQQEQPSHDGHRMLVVNPVVLRPHHGCDQG"
     gene            complement(1953..2150)
                     /locus_tag="VGA78_09490"
     CDS             complement(1953..2150)
                     /locus_tag="VGA78_09490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894149.1"
                     /translation="MAASNLERLAEAKLINPKKLSTAHKNRLKKLTRAEVTTLIRVRG
                     KLKFKGQLHRTRGKVEPYTFI"
     gene            complement(2241..5279)
                     /locus_tag="VGA78_09495"
     CDS             complement(2241..5279)
                     /locus_tag="VGA78_09495"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX9894150.1"
                     /translation="MAGAERRRVTVVFCDMVGATELAGRVDPEELREIVVAYQRMAAE
                     VVERYGGHVAQYLGDGILAYFGYPLAHEDDPVRSVHSGLAIIDAVRDSNRQEKRPARP
                     PLAVRVGIHSGTVVAGEVGGGGRREQLAMGQTPNVAARLQGIAEPNTVLVSGIVARLV
                     EGFFECQPLGTRELKGLSEPVEVLRPIRATRVRTRFDVSRSRGLVPMVGRAAELGLLM
                     QRFQAVRSARGRTVLVTAEAGIGKSRLVEELRVRTSGDPRRWLVAGGSPYHQDTPFHP
                     LVDLVRQLLGVAPDSPAAEQLAALHDLLRRLDDPPADALVLLAALLSLPPNPEQPSFQ
                     GTPQQLKERTQEVLAWVLLRMVEAEPITLVVEDLHWVDASTLEFLGLLMQRSAAARLL
                     VVLTARPSFTPAWGKHSRLSRIALDPLDQHDAEAMVQEVARGRRLGSAVVQQLVQRAD
                     GVPLFLEELTRTVLGADQGDTPGDPERELPMEAIPATLEDSLRARLDQLRDVGELVQA
                     GAAIGREFSLELVGAVVQLDQSELRRRLDRLVEAELLDTRGIWPSVTYVFRHALIQEA
                     AYGSLLTPARAALHHRIAQQIVERFPALSAVHPEVTAHHFTQAGMTAEAVGYWEEAGR
                     RSLKRFANVEAVAHLRRALDCLEGIGSDEPRRRRELALLVDLATALVATRGYAAPEVE
                     EAYDRALALCEGLGGAPELFWVLWGLGSFYQIRGPVERLLATARQMVEEARRSQDPQL
                     DVEAQFALGAACWISGDYRAAESTLDAVYRRCLDQPGLLERPSALGSVTGVNLMMNLA
                     LVTTIRGEVEKGRLIATAGLGLARRAENPFVLAGALVFEAWRAQVTDDPDTAQRAAEQ
                     GLEVSTDLPFWGALAAAFHGWARARGGQGREGLATLQAAIAGLQGAGVRTITTSLRAL
                     EADVLHGEGRKEEGLAAIEAGLADSQVTGAHAWDADLFRLRGKLELLGNAPDHSAAEA
                     ALAAAVRIGREQGAVLAESRTESAIAGILERSRVPDGAAG"
     gene            5528..7273
                     /locus_tag="VGA78_09500"
     CDS             5528..7273
                     /locus_tag="VGA78_09500"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HEX9894151.1"
                     /translation="MRPHPRLVPLPGSAPHHAPHQLRTATRHPRRRIVVRVVLRAAPL
                     PEHHRLAARLERLQAGVTRLAPEFSAAEFARFQAPDADEVRQVVDYAVGAGLEVVELS
                     RMRHDVVLTGFSDRVEAAFGVDLELFDTTRGPRRSHRGVVHFPEPLHRSIVGVLGLDE
                     IPRHRRHVMLSPAASGPQSNYSPLELGEYYQFPPNLSGRGQRIAILAFGGGYHRTDLE
                     RFFQKNLGLALPEITPIGVGRAGNRPLGRDRLRAVMADYNRPRTTMAGLLRKHGGQVV
                     ELAKDTLEVTMDIQIAGAIANRAAIDVIFADPSASGWYDAIYTALGLGPIRCRRASVI
                     SVSWGIPESAWPGHLNVIDQALRAACLKGVTVVCASGDSGSTDDSSSGRAGVAFPGSS
                     PHVLTVGGTSLRRGSRNGDLVEVVWNDKVHGLRGASGGGLSGHWSQPRYQRRVRMPRA
                     GQHAAGLWTDLHHPPGRRRRGVPDVAAVAGFRGGYRVTVGGIETTGAGTSCGAPLWAG
                     LAARLAEGVGRPLGWLNPSLYRSEFRTAFRDIVRGDNRIVPGAARAFRARKGWDCCSG
                     LGTPLGTELLRLLRG"
     gene            complement(7292..10357)
                     /locus_tag="VGA78_09505"
     CDS             complement(7292..10357)
                     /locus_tag="VGA78_09505"
                     /inference="COORDINATES: protein motif:HMM:NF016615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lantibiotic dehydratase"
                     /protein_id="HEX9894152.1"
                     /translation="MTAATRLVPSGFVVLRTPVLPFEAVLAGPEEQATGRFALSPESL
                     DALYLASPSLVEQLIRADPASARGRAVERTLFRYFTRMASRSTPFGLLAGFLVGTVGT
                     RNRLVVSADGARRHRQVGVTLLETMLRGLGSSPRFRRVIPFRVNPGLYRAGDRLHCPQ
                     GLASNSGFDGTVLSIEPVEPLDRLLAAGEPATADEWAKRLRRLAPATRQPNARRAIAE
                     LLDAGILVPALTTPVTALDPFRQTSGELERASATRSLAARLQAVAAELERVDMRRTPV
                     RPATYRRLAKGLARLPGASETTGVFQADLTVGGEVSLGRSVVAEVSRAIGWLYRWVGA
                     GPRREPLDRFRRSFRARYGDRPVPLLEALDEEIGIGLEMDDRCPVLNGPADPRYRVVL
                     ERLTSVWRTGDSVLIMRPEDLDQLGGRDDVPPLPGALAAVGSLAAVSTDAIDRGDYQF
                     RLRAVRGPSGAELLGRLAGVDARLAESVRRHLRAEEALDPEAIYAEVVHVPSPALAPI
                     QCRPQLRRYEIVALGRPAVPPRRQLPLTDLLVSVPEPGNRVVLWSARLGRRIQPRLTT
                     AHDFTRDGYLPYRFLGLVQRDNVAAVLEWDWGSLEAAPFLPRVVLGKVVLARARWLLP
                     GTVATAWRGTSGAEQLATIRRWRAEWSVPRFVVLMDPEGDLAVDLDQPASLQSLIDSA
                     GRKDGGGDTAVEELFPGPEAMPVAGPAGRFAHDLVIPFIQRAAPPSGRVRRKLPRRAA
                     RPVRRTLVPGSECLYLKLYGGTAAADRVLVEGIGPLVERLAQAGVIERWFFIRYRDSE
                     PHLRVRLIGPPQRLVGEALPHLRTLADSLLERGVIWRMTFDTYEREVERFGGPEGMDL
                     AERVFHADSIAVLRLLSNEADGLDPDARLAHAVLGVDRLLQDFVVPVRARLGLITGMI
                     KRAADREIEGSWEREAGERFRTGRQLLEAGSAAYRDRSRALRPIALRIRSIHASDGQS
                     GGPEKLLADLAHLHCNRMLRSAATGEEAIVLRWLAKLYRSRVARRSKNP"
     gene            10536..12536
                     /gene="asnB"
                     /locus_tag="VGA78_09510"
     CDS             10536..12536
                     /gene="asnB"
                     /locus_tag="VGA78_09510"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX9894153.1"
                     /translation="MCGIVALWNQDGASIDREALERAVSTLGRRGPDDEGYLLVDTRT
                     GRFVQCRGSSTDPGVDLPPLSDVGDHPYDLALGHRRLSIVDLSPAGHQPMGARGTALW
                     IVFNGMIHNFLDLRQRLERLGHQFASRSDTEVILRAYEEWGPDCVEQFNGMWAFVIWD
                     GLRQRLFASRDRLGIKPLLSAHASPVVAFASELKALRPFSRIPAELDPVAVHHYLSLM
                     KVPAPFTIYRHIRKVMPGHSALVEHNGSSETVYWRMEAQPSAVPDANEAVNRVAQVLE
                     DSVRLRLIADVPMGALLSGGVDSSIVTAMAAAGLPPGALTGFTLGFPAETDVDETPWA
                     REVADHLGVPHHPVEFSAEFLDTLPHLVAIFDEPFAVSSALGLYRLAQEASRTTKILL
                     TGDGGDEIFAGYLHRHHEVDQLWDRIERRPLSRFRSQRAWAAAETVRWRRPSVAELLR
                     IRFRSIMLSPREARDRSFNARRTLFNQAEKNALYTPEWRAWTRGSDTLSWLGATLTDP
                     GGDRLTRWQVHDVRTSLHDEMLAKVDRATMASGVEARPPLLDHRLVELAVNLPAALKL
                     RDGGGKWILKQVGERYVPSVMLNRTKRGFTIPLSGWFQREWKSILGDALSPAALRRVG
                     VFQPRGVEAVLAHHQAHPGFTTAHMVYTLLCFQIWHDVFHQG"
     gene            12546..13379
                     /locus_tag="VGA78_09515"
     CDS             12546..13379
                     /locus_tag="VGA78_09515"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9894154.1"
                     /translation="MAPTGVSIVILSYERLGALRALLEGLLAQDLTGLEIELLVCNNS
                     SAVRLRTSPFITLGRLLGRFPDLKIFNSSHNWLCRVRYTVATLARHDLILFLDDDLIP
                     VHPRLIRQMVDLQTTLRPNDILSCWTALWTRWDDTHLTKVRMGFLYPQTTEVTECDYV
                     GPGVCMFNKQILFHPAILNLPEEFHRSDSAWFPWLTAMELGSRKFYLPSYGMLRVHPE
                     SRRSALASLPGFRDGQYAAYKRMWKRGYTPVLATERHQGRTDTPEARAAQSLRTETDA
                     W"
     gene            13399..>13921
                     /locus_tag="VGA78_09520"
     CDS             13399..>13921
                     /locus_tag="VGA78_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894155.1"
                     /translation="MTDPYGLVSAERGGARLSGTPTCSLGQQLPRPDGRTDGVYGGWS
                     WDGRTLRADSDRYGMYPLYYFSTAERFAISPSVPTLLSVGAPTELDEAALAVFLRLGF
                     FLGEDTAFRAIRALPPDAKVEWCEGRLHLSGGFPVSRSQPLGRDPAIEGYIELFRIAM
                     DRRVRPDEDVGVPL"
BASE COUNT         2195 a         4957 c         4583 g         2186 t
ORIGIN      
        1 cctcggggcc gatgcggtgc tggaaggaag cctccgaaca gccgggaacc gattgcgcat
       61 cggcgtgcag ttcaccaacg cccgcgacgg gatccagctc tggtcccggc gcttcgacgg
      121 atcggccagc gaggtcttcg ccatagagga tcagatcacc agggcggtcg ttgaagccct
      181 ccggccccag agcgacaccc cggcccacac tctggttcgc ggccccaccg ccaacctgga
      241 ggcctaccgg ctgtacctgc ggggccgcca ggcactgaat cggcggaccg aagccgcctt
      301 cgaggagtgc atcgagcact tggcgagcgc cgcggcgctc gacccccggt ttgcgatggt
      361 acaggtcgcc ctggccgaag cctacttgct gctcggggtc tacggggccc ggcccgccga
      421 cgaagtcatc ccccagaccc gcgctgcggc cgagcgggcg ctcgagctcg tgcccggcct
      481 ggccgaggcg ttggccgccc gggcgacggt ccgggcggtc tacgaatggg actggaccga
      541 ggcggagcgt gacttcctcg cagccctgca gcgccacccg gtgccggcca gcggccggct
      601 ctggtatgcg aattatctgc tcgtgccgtt gggtcggttc gccgaagccc gcgaacagct
      661 cgaggaggct cagcgcctcg atccgctttc gccctcggtc tcggcgagcc tcggccaggc
      721 cgcgttgttc ggcggggact tcgaaggggc gatcgcgtac caccgcaccg ccctcgagtt
      781 ggcgcccggg tttgccccgg cgcaccattt tctgggacag gcgctcatcg aagcaggccg
      841 ctatcaggaa gcgatcgcga ccctggaacg ggcggccgag ctgagtgacc gcagtcccga
      901 tgtccttccg gcgctggcgg gcgcccgcgc ccgcgcggga gcggtcgacc aggcggaagc
      961 cctgctccgc gagttggccg atcggtcatc cgaccattac gtctctccgg tcgccttcgc
     1021 catcaccctc ctcggcctcg gtcggaccgc cgaagcactc gacgcgctcg accaggcggc
     1081 cgccgttcgg gctcccggcc tggtctggct cgctgtccgt ccgacgttcg cggtgctggc
     1141 tgccgagccc cgttaccgcg cgctgctcga ccggctgggc ctgaatcgaa cagctccagg
     1201 agctcagcca gtgactgagc cagcaggtgc tggctccaaa ttgcgctgat cgccaccagg
     1261 ccttcctgcg tcaggttgag cggcagctga tccagcgtct cgagcagctc ctgccggtgc
     1321 ccgatgtccg cttcggcatg gtgcagcagg gtgcggaatg cagcgtccgg cagcccggtg
     1381 cgagcctgca cccaggcgag gtgatccgct cggggcgggt tgccttccag caggaacagc
     1441 catcccatga tggccaccgg atgctggtgg tgaatccagt agtattgcgc ccccaccacg
     1501 gatgcgacca gggctgaggg gacttcgtcc agagccgctt gccgtgaaac ccccaagtca
     1561 acgatgtcct ggagcagcca ctcgtcgtgc ccggtttcct cggggatgtg gtgctccagg
     1621 tattccacca gaccggcggc aacggggtcg ccgggtagcg cgcgacagcg atccagcgcc
     1681 gcctgcaaca gcggcactcc ggagcggacc atgccgtgca ggtggataag gaactgcgga
     1741 aaccgcgccg caagactggg gtggcgccag agccgccggg tcaaccgggc atacacagcg
     1801 ctggtcaagt cgagcttgta tcctaggttc tcgctgtgag tcggcatggt cgcatccata
     1861 ggtgataggg cgtgacctcg gcaggcaacg gcctccaggc tcaccacggt gccgggtgaa
     1921 cctggacccg ctattggcaa tcgagattgg cgttagatga acgtataggg ctcgaccttg
     1981 ccccgcgtcc gatgcaattg gcctttgaac ttgagtttgc cgcgcaccct gatcagcgta
     2041 gtgacctcgg cgcgggtgag cttcttcaga cggttcttgt gagcggtgct caacttcttg
     2101 gggttgatca gtttagcctc tgcgagacgc tcgaggttgc tggcggccat aggtgtcctc
     2161 gctatttcgg ggagggtcgc tgccgcgccg gggtggcgcc ccaaaagggt gcacagaggt
     2221 accgtttggt ggagggcttg tcaacctgcc gcgccgtcgg ggacccgcga gcgctcgaga
     2281 attccggcga tcgcgctctc ggtgcgcgac tcggccaata ccgccccctg ctcgcgtccg
     2341 atcctcacgg cagcggcgag ggcagcctcg gccgcggagt ggtcgggcgc gttcccgagc
     2401 aactccagct tgccccgcag gcggaagaga tcggcgtccc acgcgtgggc tcccgtgacc
     2461 tgcgagtcgg ccagcccggc ctcgatcgct gcgaggccct cctcctttct cccctcaccg
     2521 tggaggacat cggcctcgag cgccctgagg ctggtcgtga tagtccgaac gcctgctccc
     2581 tgaagccccg cgatagctgc ctgcagcgtg gccagccctt cccggccctg cccgccacgt
     2641 gctcgggccc agccgtggaa ggccgccgcg agcgcacccc agaaggggag gtcggtcgag
     2701 acttccaggc cctgttcggc ggcccgttga gccgtgtcgg ggtcgtcagt gacctgggcc
     2761 cgccaggcct cgaacaccag cgcgccggcc agcacgaatg ggttctctgc tcgacgggcg
     2821 aggccgagtc ccgccgtggc gatgaggcgg cccttctcta cctccccgcg aatcgtggtg
     2881 accagggcca ggttcatcat caggttgacg ccggtgaccg accctagggc cgagggccgc
     2941 tccagcaacc cgggctggtc gagacaacgc cgatagaccg catccagagt cgactcagcg
     3001 gcgcggtaat ccccactgat ccagcaggca gcccccaggg cgaactgggc ctcgacatcg
     3061 agctgcggat cctgcgaccg gcgggcctct tccaccatct gccgcgcggt ggcgaggagg
     3121 cgctccaccg gcccacggat ctgatagaag gacccgagac cccagagtac ccagaacagc
     3181 tccggtgcgc cgcccaatcc ctcgcacaag gccagggccc gatcgtaggc ctcctctacc
     3241 tcgggggcgg catacccccg cgtcgccacc agcgcggtcg cgagatcaac cagcagggcc
     3301 agctcccgcc gccggcgcgg ctcgtcggag cctattccct cgaggcagtc gagcgcgcgg
     3361 cggaggtggg ccaccgcttc cacgttcgca aagcgcttca gacttcggcg gccggcttct
     3421 tcccagtaac ccaccgcttc cgccgtcatg ccagcctggg tgaagtggtg ggcggtgacc
     3481 tcggggtgaa cggcgctgag cgcgggaaag cgctccacaa tctgttgtgc gatccggtgg
     3541 tggagtgccg cgcgggccgg cgtcagcagc gaaccgtatg ccgcctcctg gatcagggcg
     3601 tggcggaaca cgtaggtcac cgatggccag attccccgcg tgtccaatag ctccgcctcc
     3661 accaaccgat ccaggcgccg ccgcagttcc gattggtcca gttgaaccac cgcgcctacg
     3721 agttccaggg agaattctcg cccaatggct gccccggcct ggaccagctc gcccacgtcg
     3781 cgcagctggt ccagtcgagc ccgcagagaa tcctccaagg tcgccgggat cgcctccatg
     3841 ggaagctcgc gctcgggatc gccgggtgta tcgccctggt ccgccccgag cacggtccgc
     3901 gtcagttcct ccaagaacag cggaactccg tccgcgcgct gcaccagttg ctgcactacg
     3961 gcggacccaa gccgccgccc ccgcgccacc tcctgaacca tggcctcggc atcgtgctgg
     4021 tcgagcgggt cgagcgcgat gcgcgagagc cgcgagtgct tgccccaggc cggcgtgaac
     4081 gatgggcgcg cggtcagcac caccagcagc cgcgcggccg cggagcgctg catcagaagg
     4141 ccgagaaact cgagcgtcga ggcgtctacc cagtggaggt cctccaccac cagggtgatg
     4201 ggttccgcct ccaccatccg gagtaacacc caggccaaca cctcctgggt ccgctccttg
     4261 agctgctgcg gcgtgccctg gaacgacggc tgctccggat tcggggggag cgagagcagc
     4321 gcagccagca ggaccagcgc gtcggccggc ggatcgtcca gccgccggag caggtcatgc
     4381 agggccgcca actgctccgc cgccggcgag tccggggcca caccgagcag ctgccggacg
     4441 aggtccacca gcgggtggaa tggggtgtcc tggtgatagg gagacccccc agcgaccaac
     4501 cagcgccgcg gatcgcccga ggtccgcacc cgcagctcct cgaccagccg cgacttcccg
     4561 atcccggcct cggcagtcac gaggaccgtc cgcccccgtg cgctccgaac cgcctggaac
     4621 cgctgcatca gcagccccag ctcggcggca cggccaacca tcggcaccag ccctcggctg
     4681 cgggacacgt cgaaccgggt tcgtactcgc gtcgctcgaa tggggcggag gacctcgacg
     4741 ggctcggaca ggcccttgag ctcccgagtt cccagcggct ggcactcgaa gaacccttcc
     4801 accagccgcg ccacaatccc gctcaccagc accgtgttcg gctcggcaat cccctgcaat
     4861 cgggcggcga cgttgggggt ctgccccatc gccaactgct cccgccggcc acccccaccg
     4921 acctctcccg ccacgacagt gccggagtga ataccgaccc gcacagccag ggggggacgg
     4981 gccgggcgct tttcctgccg gttcgagtcc cgcaccgcat cgataattgc caggccgctg
     5041 tgtaccgacc gcaccgggtc gtcctcgtgc gccagcggat acccgaagta cgccagaatg
     5101 ccgtcgccca agtactgtgc gacgtgcccg ccgtaccgct ccaccacctc ggctgccatc
     5161 cgctggtacg ctactacgat ctctcgcagc tcctcgggat ccacgcggcc ggccagctcc
     5221 gtggcaccca ccatatcgca gaacacgacc gtgacccgcc gccgctccgc gccagccacc
     5281 tccgtgaagg ccgctgaggg cccagccccc tcgggccgga gcgtgctccc acaaccgccg
     5341 cagaacgcat gctgcggcgg attcgaggaa ccgcactcgg gacacggcag cgccagggcc
     5401 gccccgcagc gcccgcaaaa gcgcgctccg ggcggatggg gtgtcccgca cgacgagcag
     5461 gtcaggtcag ccatggcgga tatggaatct cgggcagtag cttagcgctt ttgcccgcgg
     5521 cgagccaatg cgacctcatc cacgcctggt gccactcccg ggctcggcgc cccaccatgc
     5581 gccgcatcag ctgcgcacgg ccacgcgtca tccccgccgg cgaatcgtgg tgcgcgtggt
     5641 gctccgcgcg gcccctcttc ccgagcatca ccggctcgcc gcccggctcg agcggcttca
     5701 ggccggcgtc acccggctcg cgccggaatt ctcggccgcc gagttcgcgc gtttccaggc
     5761 cccggatgcc gacgaagtac ggcaagtggt cgactacgcc gtcggtgcag gccttgaggt
     5821 ggtcgagctg tcgaggatgc ggcacgacgt cgtcctgacc gggttcagcg atcgagtcga
     5881 agccgccttc ggcgtcgacc tggagctgtt cgataccacg cgtggacccc gccgctcgca
     5941 tcgaggcgtg gtccattttc ccgagcccct gcaccgatcc atcgtcggcg tactcggtct
     6001 ggacgagata ccccgtcatc gtcgccacgt catgttgtcg cccgcggcgt cgggccccca
     6061 gtccaactac agtcccctcg agctggggga gtactaccag tttccgccca acctgtccgg
     6121 acgcggccaa cgcatcgcca ttcttgcgtt cggcggcggc tatcaccgca ctgacctcga
     6181 gcgctttttc cagaagaacc tcggcctcgc gctgccggag atcacgccga tcggagtcgg
     6241 acgggccggc aaccggccgc tgggtagaga tcgcctccgg gctgtgatgg ccgattacaa
     6301 ccggccgcgc accaccatgg caggcctgct ccggaaacac ggcgggcaag tggtcgagtt
     6361 ggccaaggac accctcgaag tgacgatgga tatccagatc gcgggggcga tcgccaaccg
     6421 ggccgcaatc gacgtcattt ttgccgatcc gtcagcgtcg ggttggtacg acgcgatcta
     6481 cactgcgctc gggctgggtc ccatccgatg tcgtagggcg tccgtcatct cggtcagttg
     6541 ggggattccg gaatcagcct ggccgggcca cttgaacgtg atcgatcagg ccctcagggc
     6601 cgcgtgcctc aagggcgtca ccgtggtatg cgccagcggc gacagcggct ccaccgatga
     6661 ctcctcttcc ggcagggctg gagtcgcctt ccccgggtcg agtccccatg tcctgacagt
     6721 aggcgggacc agcttgcgcc gcgggtcgcg gaacggcgac ctggttgagg tggtctggaa
     6781 cgacaaggtc cacggcctca ggggcgcgag cggcgggggc ctgagcggtc actggtctca
     6841 accgcgctac cagcgccgag ttcgaatgcc ccgagcgggc cagcatgccg ccggactctg
     6901 gaccgatctc catcaccctc cggggcgaag gcgtcgcggc gtgcccgacg tggccgctgt
     6961 cgccggtttc cggggcggat accgggtgac cgtcggaggc atcgagacca ccggcgccgg
     7021 caccagctgc ggagcccccc tctgggccgg gctggccgcg cgccttgccg agggggtcgg
     7081 ccggcctctc gggtggctta acccgtcgct ctaccgctcg gagtttcgaa cggcctttcg
     7141 cgacatcgtc cggggcgaca atcggattgt gccgggcgcc gcgcgtgctt tccgggcgcg
     7201 gaaggggtgg gactgctgca gcggcctcgg aacgcccctg ggcaccgagc ttctccgatt
     7261 gttacggggc tgaattggca cgctagagtc attacgggtt tttcgatctg cgtgccacac
     7321 gagaccggta tagcttcgcc agccaccgca gcacgatcgc ctcctcccca gtcgcggccg
     7381 agcgcagcat ccggttgcag tgcaggtgag cgaggtcagc cagcagcttc tccggacctc
     7441 cgctctggcc atccgacgcg tggatcgagc ggatccgaag agcgatgggc cgaagtgcgc
     7501 gcgatcggtc gcggtacgcg gcggacccag cctccaacag ttgtcggccc gtccgaaacc
     7561 gttcccccgc ctcacgctcc caagaccctt ctatctcccg atcggcggcc cgcttgatca
     7621 tcccggtgat cagccccagt cgagctcgga ccggcaccac gaaatcctgg agcaggcggt
     7681 cgacgcccag gacggcatgc gccagccggg cgtccgggtc cagaccgtcg gcctcgtttg
     7741 atagcagtcg cagcactgcg atgctgtccg cgtggaagac ccgctccgcc aggtccatcc
     7801 cctccggacc gccgaagcgc tccacttcgc gctcgtaggt atcgaacgtc atacgccaaa
     7861 ttaccccacg ctcgaggagg gagtcggcca gggtccgcag gtgtggaagg gcctcgccca
     7921 cgagccgctg aggagggccg atcagccgca ctctcaggtg aggctccgaa tctcgatagc
     7981 ggatgaagaa ccagcgctcg attactcctg cctgagccaa gcgttctacc agcggcccga
     8041 tcccctccac cagaacccga tccgcagccg cggtgccgcc gtacagcttg aggtacaggc
     8101 actccgatcc ggggacgaga gttcggcgca ccggacgggc ggctctccgc gggagcttcc
     8161 gtcgcacccg cccgctcgga ggcgcggccc tctggatgaa cgggatcacc aggtcgtgag
     8221 cgaatcggcc cgctggacct gccaccggca tggcttcggg tccaggaaac agctcctcga
     8281 ccgcggtgtc tcctccgcca tccttccgac cggccgagtc gatcagagac tggaggctcg
     8341 ccggctgatc gagatccacg gcgaggtcgc cctcggggtc catcagcacg acgaatcgcg
     8401 gaacgctcca ctccgcccgc cagcgccgga tcgtcgcgag ttgctccgcg ccggaagtcc
     8461 cgcgccacgc ggttgcgacg gtgccgggca acagccagcg ggctcgcgcc agcacgactt
     8521 tccccagcac gacgcggggg agaaacggcg ccgcttccag gctcccccaa tcccactcca
     8581 gcactgctgc cacgttgtcc cgttggacca ggcccaggaa ccggtatggg agatagccgt
     8641 cccgcgtgaa gtcgtgcgcc gtcgtaagac gcggctggat tcgccggccg aggcgggccg
     8701 accagagcac cacccggtta ccaggctcgg gcaccgacac cagcaggtcg gtgaggggca
     8761 gttggcgccg gggcggtacc gcgggtcgcc cgagagccac aatctcgtag cgacggagct
     8821 gcggccggca ctggatcggg gccagcgccg gcgacggaac gtgcaccacc tccgcataaa
     8881 tcgcctcggg atcgagggcc tcctccgccc gcaggtgccg ccgcaccgat tcggccaacc
     8941 gggcgtccac cccggccagc cgccccagca gctccgcccc cgagggacct cgcaccgcgc
     9001 gcaaccggaa ttggtagtcc cctcgatcga tcgcgtctgt cgacaccgcg gcaagacttc
     9061 ccacagccgc cagcgcgccc ggaagtggcg gcacgtcgtc acgcccaccg agctgatcca
     9121 ggtcctccgg gcgcatgatg agcactgaat cgcccgtgcg ccacacactg gtgaggcgct
     9181 ccagaaccac ccggtaccga ggatccgcgg gcccgttgag caccggacac cggtcgtcca
     9241 tctcgagccc gatgccgatc tcctcgtcaa gtgcttcgag cagaggaact gggcggtccc
     9301 cgtagcgggc ccggaacgag cgacgaaacc ggtcgagcgg ttcgcgccgc ggacccgctc
     9361 caacccagcg atacagccac ccgatggccc gcgacacctc ggcaacgaca gagcgcccga
     9421 ggctcacttc tcccccgacg gtgagatcgg cctggaagac ccccgtggtc tccgaggcgc
     9481 cgggcagccg ggcgagcccc ttcgcgaggc ggcggtacgt ggcgggacgg actggggtgc
     9541 gtcgcatgtc gacccgctcc agctcagccg ccacggcctg gagtcgtgcg gcgagcgatc
     9601 gggttgctga ggcgcgttcc aactccccac tggtttggcg gaacgggtcc aacgcagtaa
     9661 cgggggtcgt gagcgccggc accaggatcc ccgcgtccag cagctcggcg atggcgcgcc
     9721 gggcgttggg ttgccgagtc gccggtgcca gccgtcgaag ccgtttcgcc cactcgtccg
     9781 ccgtcgccgg ctcaccagcc gcgagcaacc ggtcgagcgg ctcgaccggt tcgatcgaca
     9841 gcaccgtgcc gtcgaatccg ctgttcgaag ccagcccctg cgggcaatgc agccggtcgc
     9901 ccgcgcgata caggcccgga ttcacccgaa acggaatcac gcgccggaac cggggcgagg
     9961 agcccagccc acgaagcatc gtctcgagca gcgtcactcc gacctgccgg tgacgccgcg
    10021 caccatcagc ggagaccacc aatcgattgc gggtcccgac cgtccccacc aagaaccctg
    10081 cgaggagacc gaacggagtc gaccgggagg ccattctggt gaagtagcgg aacagcgtcc
    10141 gctccactgc gcggccccgg gccgaggcag gatcggcccg gatcagttgt tccaccaagc
    10201 taggggaagc gagatacagc gcgtccaggg attccgggga gagagcaaag cgcccggtag
    10261 cctgctcctc cggtccggcg agcaccgctt cgaaaggaag taccggggtc cggagcacaa
    10321 cgaaccccga gggtacgagg cgggtggcgg cggtcacagg tcatccctcg cagcacggga
    10381 tagcaggcat cgagcgcacc gggaacgagt gctgagtgga ccaagtatag gctggcgcaa
    10441 tccggacggc gggttgggcc ggccccctta ccttaagggc ggaccgtctg ggagagatcg
    10501 tgctgcagcg ggtggaaggg tagccggccg ccccggtgtg cggcatcgtt gccctctgga
    10561 atcaggacgg cgcttcaatc gatcgggaag cactggaacg agcggtgagc acgctcggcc
    10621 ggcgtggccc ggacgacgaa ggctacctgc tggtcgacac tcgcaccggc cgcttcgtcc
    10681 agtgccgggg ctcgtcgacc gacccaggcg tggatcttcc cccgctctcc gacgtcggcg
    10741 atcaccccta cgacctggcc ctgggccatc gccggctctc gatcgtcgat ttgtctcccg
    10801 ccggccacca gcccatgggc gcgcgcggga ccgcgctgtg gatcgtcttc aacgggatga
    10861 tccacaactt tctcgatctc cggcagcgac tcgaacggct ggggcatcag ttcgcgagcc
    10921 gcagcgacac cgaggtcatc ctgcgggcct acgaggagtg gggtcccgat tgcgtcgagc
    10981 agttcaacgg gatgtgggcc ttcgtcatct gggacggact gcgacaacgg ctcttcgcgt
    11041 cgcgcgatcg gctggggatc aagccgcttc tctccgccca cgccagcccg gtggtcgctt
    11101 ttgcctcgga gctgaaggcg ctccggcctt tctcccgcat cccggccgag ctcgaccccg
    11161 tggccgtgca ccactacctc tcgctcatga aggtgcccgc acccttcacc atctaccgtc
    11221 acatcagaaa ggtgatgccc gggcactcgg ctctggtgga gcacaacggc tcgagcgaga
    11281 ccgtctactg gcggatggag gcgcaaccat cggcggtgcc tgacgcgaat gaagctgtga
    11341 accgggtggc ccaggtcctg gaagacagcg tccgcctccg gctcatcgcc gatgtgccga
    11401 tgggcgcgct cctgagcggt ggagtcgact ccagcatcgt gaccgctatg gcggcggccg
    11461 ggctgccccc gggtgcgctg accggcttca ccctcgggtt tcccgccgag acggatgtcg
    11521 atgagacccc ctgggccagg gaggtcgccg atcacctcgg cgtcccccat cacccggtcg
    11581 agttttcagc cgagtttctg gacaccctgc cccacctggt ggccattttc gatgaaccct
    11641 tcgcggtttc gtcggccctg ggcctctatc gtctggcgca ggaggcctcg cgaacgacca
    11701 agatcctgct caccggcgac ggtggcgacg agatcttcgc gggctacctc caccgtcacc
    11761 atgaggtgga tcagctctgg gacaggatcg aacgccgtcc gctttcccgg ttccgctccc
    11821 agcgcgcctg ggcggcggcc gagacggtgc gctggcgtag gccgtccgtc gccgagctgc
    11881 tgcgaattcg gttccgttcg ataatgctct cgccccgcga ggcccgggat cgttcgttca
    11941 acgcccggcg gaccctgttc aaccaggcgg agaagaacgc gctctacacg ccggagtggc
    12001 gtgcctggac ccggggcagc gacaccttat cgtggctcgg cgccacgctg acagaccccg
    12061 ggggcgatcg cctcacccgc tggcaggttc acgacgtgcg gacctcgctg cacgacgaga
    12121 tgctcgccaa ggtggaccgc gcgaccatgg cgtcgggcgt cgaggcccgt ccgccgctgc
    12181 tcgatcaccg gctggtggag ctggcggtga acctgccggc ggccctcaag ctgcgggacg
    12241 gcggaggaaa gtggatcctc aaacaggtgg gcgaacgcta cgtcccttcc gtcatgctca
    12301 accgcaccaa gcggggcttc accatccccc tgtcgggctg gttccagcgg gagtggaaga
    12361 gcatcctcgg ggacgcactc tcccccgccg cgctccgaag ggtgggagtg ttccagcccc
    12421 gcggagttga ggcggtgctg gcacaccacc aggcccatcc cggattcacc accgcgcata
    12481 tggtctacac cctgctctgc tttcagatct ggcacgacgt cttccaccag ggatgaacgg
    12541 cacctatggc cccgaccggc gtctcgatcg tcatcctgtc ctatgagcgc ctcggcgccc
    12601 tccgggccct gctcgagggc ctgctggctc aggacctgac cggcttggag atcgagctgc
    12661 tggtctgcaa caactcttcc gcggtccggc ttcggacctc gccctttatc acgttggggc
    12721 ggttgctggg ccggtttccc gacctgaaga tcttcaactc gagtcacaac tggctctgcc
    12781 gggtccggta caccgtcgcc accctggctc ggcacgacct gatcctgttt ctcgatgacg
    12841 atctcatccc ggtccaccct cgcctgatcc ggcagatggt cgatctccag accacgcttc
    12901 gccccaatga catcctgtcg tgctggaccg cgctctggac tcgctgggac gacacccact
    12961 tgaccaaggt gcgcatgggc tttctctacc ctcagaccac cgaggtgacc gagtgcgact
    13021 atgtagggcc cggggtctgc atgttcaaca agcagattct ctttcatccc gcgatcctga
    13081 acttgcccga ggagttccac cgttccgatt cggcctggtt cccctggctc accgccatgg
    13141 agctgggaag ccgaaagttc tacctgccct cctatggaat gctgcgggtg catccggagt
    13201 ccaggcgttc cgcgctggcc agcctgcccg ggttccgaga cggccagtat gcggcctaca
    13261 agcggatgtg gaagcggggc tacacaccgg tgctcgccac tgagcggcac cagggtcgca
    13321 ccgatacgcc ggaagccaga gcggcgcaga gtcttcggac cgagacggac gcgtggtagg
    13381 acccggcgag gggcgagagt gaccgatccc tacgggttgg tcagcgcgga gcgcgggggc
    13441 gcacggctca gcggcacccc cacctgcagc ctggggcaac agctaccgcg gccggacggg
    13501 cggaccgacg gcgtgtacgg cgggtggtcg tgggacgggc gcaccctgcg ggcggacagc
    13561 gatcgctacg gcatgtatcc gctctattac ttcagcacgg cggagcgttt cgccatctcg
    13621 ccctcggtgc cgaccctcct gtcggtcggt gcgccgaccg agctggatga agcggcgctg
    13681 gcggtgtttc tccggttggg gttcttcctg ggcgaggaca cggcattccg ggccattcgc
    13741 gccctccccc ctgatgcgaa ggtcgagtgg tgtgagggtc gactgcatct ctcaggcggc
    13801 tttccggtat cccggtccca accgctgggc cgcgatccgg ccatcgaggg ttacatcgag
    13861 ctgttccgga tcgccatgga ccggcgggtg cggcccgatg aggacgtggg cgttccgttg
    13921 a
//
LOCUS       DASWKS010000329         5008 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_162812, whole genome shotgun sequence.
ACCESSION   DASWKS010000329 DASWKS010000000
VERSION     DASWKS010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5008
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162812"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3070)
                     /locus_tag="VGA78_09525"
     CDS             complement(<1..3070)
                     /locus_tag="VGA78_09525"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9894156.1"
                     /translation="MTSVIETLTARLAGLYGVERQLGQGGMATVYLARDLRHDRQVAI
                     KVLRPELAAVVGAERFLHEINVVAGLQHPHILGLIDSGRADSLVYFVMPFVAGESLRH
                     RLQRETQLPVEEALRITREVADALAYAHHHGVIHRDIKPENILIDSGHAVVADFGIAR
                     SARAGIQVSSVGLAIGTPAYMSPENWKGEAVDGRADLYSLGCVLYEMLTGAPPFTGPN
                     ADRVAVLHLMEPPRPIRTSRPTAPAGIQRVIDLLLAKSPADRVQTADELVTILTGSAT
                     PVSVAASRARVSRWMAAAVVGIGLIVLFTLWFQGRAPPLDAERFVVLPFRHRGDAAPQ
                     LVNGDMCESLIYEALGRWRDLSVANSLLVRDAIERRGGQVASLQGGLDLARELGAGRL
                     LWGEVWETGDTTVVRAAVYDAGDGQVIHEHTIRMQQGTVGSSFAALADTLVVRSAGLT
                     APAQAGTGTLSFIALREYARSHAAAARWDLSEAAARLRAALAADPAYPQAHLRLAQIA
                     QWQGLPSRTWREDVVASLAGGWVSNRDSALARALLDLADRRFQDGCQRYRSLVARDSL
                     DFAAWYGLGECQARDRTVLRDSTSPSGWRFASSGQAAVEAYTRALTVVPSVHVVYQGA
                     ALARLQELLYVDPELVRPGMAIEGLDTLRFASFPSLAADTLGFIPWLATDLFAGRPEA
                     LPESRPQALRRNRELLRRLAETWVRAYPRSLPALETYVVALELNGELGGTVQGMPTAL
                     EAVRQMRALAPTDVYRRDAMLWETRIRLKQGDFAAARAVADSLLRGLDLGHAQAHRFA
                     PAAALTGRIQLAADLLASGAPVWTPTAPDMRPVEVPVPVRADALRLMAYASFGAPADS
                     LTALSRRVRAGVAAYIVGAVRPVVEAALLDRAAIFAFPLLPTPETAQNYMLELQRAVR
                     RRDLTTVRARLDTIAAARRGQRPGDMALEVTLAEASLRLAAADSAGATTQLDQALEAL
                     ASFGMGLLREVPPAAALGRAMALRAELAAAVGDQTSARRWARALITLWSNA"
     gene            complement(3322..4878)
                     /locus_tag="VGA78_09530"
     CDS             complement(3322..4878)
                     /locus_tag="VGA78_09530"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9894157.1"
                     /translation="MRPIRPVRLATTLLLFIVTFTRPGLGQARGNGADLKGLDEAIAA
                     MMAEFHVPGVGVGIIRDGQVVLAKGYGLRDVEANTPVTPRTLFAIGSNSKSFTTVLLA
                     MLVDEKKIEWNKPVRTWLPDFELKDPYATREMTPQDLVSHVSGLPRHDGLWYGRSFTR
                     QELYKRLKYLEPNQSFRNLWQYQNLMFLTAGVLVERITGQTWEQQLQSRIFTPLGMSR
                     ANASANDLPKADDFSWAYDYRDGKVQKIPYRNIDQIGPAGSINASVEDMLKYVRFRID
                     YGKVGDKQLVSARQDSMMQRPRAVVPGGWTFQGTTEVGPDTYGLGLAVTSYRGHKLVM
                     HGGGIDGFISQMAWLPQEKVGLVVLSNSTNSAGGGNPLPNALTFHIMDRMLGLSRLDW
                     FARAKAQTVRGDSIQKARRAADLKDRVAGTSPSHALDGYAGRYEHPGYGVLEIRRGAQ
                     GLEVVLDTHNAPLTHVHYDAFEVVPGTPQGGMLQNVRFTFGMDAKGAINTVSAPLEPS
                     VAPIQFTRMK"
BASE COUNT          818 a         1722 c         1708 g          760 t
ORIGIN      
        1 cagcgttgct ccagagcgtg atcagggcgc gggcccagcg ccgagccgaa gtctggtctc
       61 cgaccgccgc cgcgagctcg gcccggagcg ccatggcgcg ccccagtgcg gcggccggcg
      121 gcacctcgcg caggagcccc atcccgaatg aggccagcgc ctccagagcc tgatccagct
      181 gggtcgtcgc gcccgcgcta tcggccgcgg ccaggcgcag gctcgcctcc gccagggtga
      241 cttcgagcgc catgtcgccc ggccgctggc cccggcgagc ggcggcgatg gtatcgagcc
      301 gggctcggac cgtggtcagg tcgcgccggc gaacggctcg ctgcagctcc agcatgtagt
      361 tctgcgccgt ctcgggcgtt ggcagcagcg ggaaagcgaa gatggcggct cgatcgagca
      421 gagccgcctc aactaccggt cgcacagccc ccacgatgta ggcggcgacg ccggcccgaa
      481 cccggcgcga cagggcggtg agactgtcgg ccggcgcacc gaacgaagcg tatgccatca
      541 gccggagcgc atccgcccgc accggcaccg gaacctccac cgggcgcata tccggcgcgg
      601 tgggagtcca gactggagcc cccgaggcca gcagatcggc cgccagctgg atccggccgg
      661 tcagcgccgc ggcaggggcg aaccggtggg cctgtgcatg tcccaggtcc agcccgcgga
      721 gcaggctgtc ggctaccgcg cgcgcggctg cgaagtcgcc ctgcttcagc cggatccggg
      781 tttcccagag catggcatcg cgccggtaca catcggtcgg ggcgagggcc cgcatctgcc
      841 tgacagcttc cagcgcggtt ggcatccctt gcaccgtgcc gcccagctct ccgttcagct
      901 ccaatgccac cacatacgtc tccaacgccg gcaggctcct gggataggct cggacccagg
      961 tctcggccag gcggcggagt agctcccggt tccggcgcaa ggcctggggg cgggattccg
     1021 gcagggcttc ggggcggccg gcgaacagat cggtcgccag ccacgggatg aagcccaggg
     1081 tgtcggctgc cagagacgga aaggacgcga atcggagcgt gtcgaggcct tcgatcgcca
     1141 tgccgggccg caccagctcg gggtcgacat agagcagctc ctgcaaccgg gccagcgcgg
     1201 caccctgata gaccacatgg accgatggca ccaccgtgag cgcgcgggta tatgcctcca
     1261 ctgcggcttg accgctggaa gcgaaccgcc accctgaggg actggttgaa tcccgaagca
     1321 cggtgcgatc gcgggcctgg cattcgccca gcccatacca ggcggcgaag tccagagagt
     1381 cgcgagccac gaggcttcgg tagcgctggc agccgtcctg aaaccggcga tcggccaggt
     1441 ccaaaagggc ccgggccagc gcgctgtcgc ggttcgagac ccacccaccc gcgagcgatg
     1501 caaccacgtc ctcgcgccag gttcgggacg gcagcccttg ccactgagcg atctgggcca
     1561 gccggagatg ggcttgggga tacgccggat ccgccgcaag cgcggcccga agcctggccg
     1621 cagcctcgga caggtcccac cgggcggccg cggcgtgcga ccgggcatac tcccgaagcg
     1681 cgatgaagga cagggtcccg gtccctgcct gggccggcgc ggtgagtccc gcactccgta
     1741 ccaccagcgt atccgcgaga gcggcaaagc tggacccgac ggtgccctgc tgcatgcgaa
     1801 tggtgtgttc gtggatcacc tgcccgtcgc ccgcgtcgta gaccgccgcg cgcaccaccg
     1861 tggtatcgcc ggtctcccag acttcacccc agagcagacg gccggccccc agctctcgcg
     1921 ccaggtccag tccaccttgg agcgatgcga cctggccccc tcggcgctcg atcgcgtcgc
     1981 ggaccagtag ggagttcgcg accgagaggt cgcgccaacg ccccagcgct tcatagatca
     2041 gcgactcgca catgtcgccg ttcaccagct gcggcgcggc gtcgccccga tgccggaagg
     2101 gcagcaccac gaacctctcg gcgtcgaggg gcggagccct gccctggaac cacagcgtaa
     2161 agaggacaat gagtccgatc ccgaccacgg cagccgccat ccagcggctc actctggccc
     2221 gggacgcggc caccgacact ggggtggccg aaccggtgag gatcgtgacc aactcgtccg
     2281 ccgtttgcac ccggtcggcc ggcgacttcg ccagcaggag gtcgatcacg cgctggattc
     2341 ccgccggcgc ggtcggccgg ctggtgcgga tcggccgcgg aggttccatc agatgcagca
     2401 ctgcgacccg atcggcgttg gggccggtga acggcggcgc accggtcagc atctcgtaca
     2461 atacgcagcc gaggctgtag agatcggccc ggccgtccac cgcttcgccc ttccagttct
     2521 cggggctcat gtaagccggc gtaccgatgg cgagcccgac cgaagacacc tggatcccgg
     2581 cgcgagccga gcgagcgata ccgaaatcgg cgaccaccgc gtgacctgag tcgatcagga
     2641 tgttttcggg cttgatgtcc cggtggatca cgccatggtg gtgcgcgtag gccagagcgt
     2701 cggccacttc gcgggtgatt cgaagggcct cctcgaccgg cagctgggtt tcccgctgga
     2761 gccgatgccg cagcgactcg cccgccacga acggcatgac gaaatacacc aggctatcgg
     2821 cccggcccga atcgatcaga ccgaggatgt gcggatgctg gaggccggcg acgacattga
     2881 tctcatgcag aaaccgctcg gcaccgacga ccgcggccag ctcggggcgg agcaccttga
     2941 tcgccacctg gcgatcgtgt ctcaagtcgc gggccaggta caccgtcgcc atgccaccct
     3001 ggccaagttg ccgctcgact ccgtacaggc cggcgagacg ggcggtaagc gtctctatga
     3061 ctgaggtcac gggattaaag tatgaccccc ggtgcggggg gacgccagcg acctgctggg
     3121 caccaggaac cgtggccacg ttcggcggga taatgctgcc ggtgcgcggc tgcggtgcct
     3181 ccgcggggac actgcgcgcg ggtaattcgc tcgcaaaagg gccggactca cgctgccgcg
     3241 cgcaaagccc cgcgtcggct ccgcagccgc gcaccggcct ccacgttctg gagcacggga
     3301 ggccggcaaa ccaggaatct gttatttcat cctggtgaac tggatcggcg cgaccgaggg
     3361 ctcgagcggt gccgacaccg tgttgattgc gcctttcgca tccatcccga acgtgaaccg
     3421 cacgttctgc agcatcccgc cctggggcgt cccgggaacc acctcgaacg catcgtagtg
     3481 cacgtgggta agcggggcgt tatgagtgtc cagcaccacc tcgagtccct gggctccccg
     3541 ccggatctcg agcacaccgt aacccgggtg ttcgtaccgc ccggcgtagc cgtcgagcgc
     3601 atgactggga ctggtccccg ccactcggtc cttcaggtcc gcggcccggc gtgccttctg
     3661 gatcgaatcg ccccggacgg tctgggcctt ggcccttgcg aaccagtcca ggcgtgagag
     3721 tcccagcatc cgatccatga tgtggaaggt gagcgcgttg gggagggggt tcccaccccc
     3781 ggcgctgttg gtgctgttgg agagcaccac caggcccacc ttttcctgcg gcagccaggc
     3841 catctgggag atgaacccgt cgatgccgcc gccatgcatc acgagcttgt gtccccgata
     3901 gctggtcacc gcgagcccga gtccgtaggt atccggtccc acctcggtgg tcccctggaa
     3961 ggtccatccc cccggcacca ccgcccgggg gcgctgcatc atgctgtcct ggcgggccga
     4021 gaccagctgc ttgtcgccca ccttgccgta atcgatccgg aaccggacgt acttgagcat
     4081 gtcctcgacg ctcgcgttga tcgagccggc cggtccgatc tgatcgatgt tgcggtaggg
     4141 aatcttctgg accttgccat cccggtagtc ataggcccag ctgaagtcgt ccgccttcgg
     4201 caagtcattg gccgacgcgt tggcccggct catgccgagc ggcgtgaaga tccggctctg
     4261 gagctgctgt tcccaggtct ggccggtgat tcgctcgacc agcacgccgg cggtcaggaa
     4321 catcaggttc tggtactgcc agaggttccg gaacgactgg ttgggctcga ggtatttgag
     4381 ccgtttatag agctcctgcc gggtgaagga gcggccgtac cagaggccgt cgtgccgcgg
     4441 caggcccgac acgtgcgaga ccaaatcctg cggggtcatc tcgcgcgtgg catagggatc
     4501 cttgagctcg aagtcgggca gccaggtgcg gaccggtttg ttccactcga tctttttctc
     4561 gtccaccagc atcgccagca gcacggtcgt aaacgacttc gagttggagc cgatggcgaa
     4621 gagggttcgc ggcgtaaccg gggtgttggc ctcgacatcg cgaagcccgt accccttggc
     4681 gagcaccacc tggccgtccc ggatgatccc caccccgact cccggcacgt ggaactcggc
     4741 catcatggcc gcgatggcct cgtcgaggcc cttgaggtcg gccccgttcc cccgggcctg
     4801 gcccagtccc gggcgggtaa acgtgacgat gaacaggagc agcgtggtcg cgaggcgcac
     4861 cggacggatg ggacgcatag ggcctccagg gatttgtcgg caggattgtg tacaaaatct
     4921 atggcggagg gaggcagggg gctatggggg cggtccgggc gcgccggagg tccgcagaga
     4981 ggcgcactgc agcacctcgg agcgggcc
//
LOCUS       DASWKS010000330         4825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2761913, whole genome shotgun sequence.
ACCESSION   DASWKS010000330 DASWKS010000000
VERSION     DASWKS010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2761913"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VGA78_09535"
     CDS             <1..399
                     /locus_tag="VGA78_09535"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX9894158.1"
                     /translation="RDGRPVELWPRVKLADSLDADVLVSIHNNALPDGVNPFTNNGSS
                     VFYFHPRSIPLARAIQRELTRRLPLRELGIARGDLALVRGTWMPSVLVEGMFMLIPDQ
                     EAALRTEAGRLAYAEAVRAGIRAFLAGERM"
     gene            386..2578
                     /locus_tag="VGA78_09540"
     CDS             386..2578
                     /locus_tag="VGA78_09540"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEX9894159.1"
                     /translation="MSGCDAAPVWYVSKLMRSQWLFLAALGVPFGSAPVLAQTPAQRT
                     VLEAFRDSLERVGDSLGLARTEAGMVALMVRGRANAFDHLRLGFLALRQADLGATRYF
                     EDAASEFQTVTRMAPSWPYAWFGLGLAEFGLLHARSAQRTSTQPPLARASVALARAAM
                     LDGRFADMLVEEAFQARRERYQPKVTVMLVALRVAAKPKAPNPMILAGLGRLEREFGE
                     PGTALQAFESWLPQSGRQRGLALLEIARTRFLMGRQDGYTPYFDGAAFDDSATVSSYR
                     DDLALIASGGELQQFDRSSGAQRVAHLRGFWGGRDAADLRMPGERLREHYRRMYLARR
                     TYPIFLPGRPLEYIATASTVDDRGLMYIRHGQPDDRVELTTMGVEPNESWRYVRPEGD
                     LVIHFVARHDPAVFRLVESLLDVAETGEVFNPSTRDLVSRGREALLRSREQMSPVYRR
                     ERRAGPERGRAFVLAERAMSLQSLRVATSTDSYRDRFATSLAARVDFAILQVDSAGAR
                     LHIAFAVPFAQFGAAWLDQGVEYPVRFRLSGFNEAGVVITALDTVARPITREVFGERW
                     LAGTLSVPIPLGRLRVRVAMQDGDSVGTLLPLRSFEVLAPGALVLSDVTVGVPSHPWQ
                     AELGAGERVALLPLGLLWRTDRAEVAYEVTAPPGAALKSQITLMRADEQAGVVSNQQI
                     AHPSRATRQLFRQVLDLRKLKPGLYRIEVTVTDGLGGLARRVREFDVR"
     gene            2727..>4825
                     /locus_tag="VGA78_09545"
     CDS             2727..>4825
                     /locus_tag="VGA78_09545"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEX9894160.1"
                     /translation="MAAAPRGPVALSPNAITVLEKRYLLKDDSGTPIENPSDLFWRVA
                     GTIAEPDRAYGASEGAVEALAEAFYDVMAHRLFMPNSPTLMNAGRPLGQLSACFVLPV
                     EDTLSNGESGIYDTLRSMALVHQSGGGTGFSFSQLRPKNDIVRSTMGVASGPVSFMSL
                     YDASTDVVKQGGTRRGANMGILRVDHPDILEFITCKDDTTKITNFNISVAVTDAFMQA
                     VENDGEYDLISPATGKVAGRLRARQVWEKIIHGAWKTGEPGVFFIDRANHYNPVPHLG
                     SYEATNPCGEQPLLAYDVCNLGSINLAEFVVGGQIDWARLRRTVHLCTHFLENVIDAN
                     HYPLEEITQLAQRIRRIGLGVMGLADLFIKLGIAYDSEEAVELGRKIQKFVDDEAKNE
                     SERLAEIRGVFPEWERSIWGPDETCARDAHGLRIRALRRLRNCNVTTVAPTGTISIIT
                     GCSSGIEPLFAVAFMRNQAGGLMPDVNEDFTRIAREEGWYSDELMRRIAGEGHIRLPE
                     VPDRWKQVFVTANEIKPEWHVRMQAAFQEHNDSAISKTVNFANSAAEADVEVIYRLAY
                     QLGCKGVTVYRDGSREMQVLSTGSTAHKVVEQAGGRVGGPVAILPGSVRDLAAAAGEM
                     AEVRAENDRLRQLVHELESENLQRRQKRSRPDLLRGSVRRIETPLGTLYVTITEDDKG
                     QAFEVFMSLGKAGGAIMA"
BASE COUNT          766 a         1587 c         1625 g          847 t
ORIGIN      
        1 cgcgatggcc gaccggttga attgtggccc agggtcaaac tcgccgacag tcttgacgcc
       61 gacgtcctgg tttcgatcca caacaacgcg ctacccgatg gcgtgaaccc attcaccaac
      121 aacgggagca gcgtcttcta ctttcacccc cgcagcatcc cactggcgcg ggcgatccag
      181 cgggagctga cccggcgcct gccgttgcgg gagctgggaa ttgcccgagg agatctggcg
      241 ttggtccggg ggacctggat gccttcggtt ctggttgagg gaatgttcat gctcattccc
      301 gatcaggagg ccgccctgcg caccgaggcc gggcggttgg cctacgccga ggcagttcgg
      361 gccggaatcc gggcgtttct ggcgggtgag cggatgtgat gctgcaccag tctggtacgt
      421 ctccaaactg atgcggtcgc agtggctttt cctggccgcg ctgggggttc cattcggctc
      481 cgctccagtg ctggcgcaga cgcctgctca gcgcacggtg ctcgaggcct tccgagactc
      541 actggagcgt gtgggagaca gtctgggcct ggctcgtact gaagccggga tggtcgcgtt
      601 aatggtccgc ggcagggcca acgccttcga tcacctccgg ctcggcttcc tcgccctgag
      661 gcaggccgat ctcggcgcca cccgttactt cgaagacgcc gcttccgaat tccagaccgt
      721 cacccggatg gcgccctcgt ggccctatgc ctggttcggc ctgggattgg ctgagttcgg
      781 gctgctccat gcccgttctg cccaacgtac ctccactcaa ccacccctgg cccgcgcctc
      841 cgtggcgctg gcgcgcgcag ccatgctcga cgggcggttc gccgacatgc tggttgagga
      901 ggcgtttcag gcccggcggg aacggtacca gccgaaggtg acggtcatgc tggtggcgct
      961 gcgggtcgcg gccaaaccca aggcgccgaa tcccatgatc ctggccgggc tcggacggct
     1021 ggagcgcgag ttcggcgaac cggggactgc gcttcaggca ttcgagagct ggcttcccca
     1081 atcaggccgg cagcgcggtc tggcactgct tgagattgcc cgaactcgat tcttgatggg
     1141 gcggcaggat ggctacaccc catactttga cggggcggcc ttcgatgaca gcgcgaccgt
     1201 ctccagctac cgggacgacc tcgccctgat cgcctccggt ggcgagctgc aacagttcga
     1261 ccggtccagc ggggcccagc gggtggccca ccttcgcggt ttctggggcg ggcgggacgc
     1321 cgccgatctt cggatgccgg gcgagcggct gcgggagcac taccggcgga tgtatctcgc
     1381 ccggcggacc taccccattt tcctgccggg gcgacctctg gagtacatcg ccacggcgtc
     1441 cacggtggat gatcggggac tcatgtacat ccggcacggc cagccggatg atcgggtcga
     1501 gctcactacc atgggagtgg agcccaacga gtcctggcgt tacgtccggc cggaaggcga
     1561 cctggtgatt cacttcgtcg cccggcacga tccggctgtc ttccggctgg tggaaagcct
     1621 gctggacgtg gcggagaccg gcgaggtctt caacccgtcg acccgggacc tggtctcccg
     1681 cggaagagag gctttgctgc gctcccggga gcagatgtcg ccggtgtatc ggcgagagcg
     1741 acgggccggt cccgagcggg gtcgcgcctt cgtgctggcc gagcgggcca tgagcctcca
     1801 gagcctgcgc gttgccacct ccaccgattc ctaccgggac cggttcgcca ccagcctggc
     1861 tgcgcgagtc gacttcgcga tcctccaggt ggactcggcc ggcgctcgac tgcatatcgc
     1921 gtttgccgtt cccttcgcgc aattcggtgc ggcctggctg gatcagggag tggagtaccc
     1981 ggttcgattc cggctctccg gcttcaatga agccggcgtg gtgatcaccg ctctggacac
     2041 ggtcgcccgt ccgatcacgc gcgaggtgtt cggcgaacgc tggctggccg gcaccctgtc
     2101 ggtgccgatc ccgctgggcc gactgcgggt tcgggtggcg atgcaggacg gtgacagcgt
     2161 cgggacgctg ctgccgcttc gttcgttcga ggtgctcgcg ccgggcgcgc tggtgctgag
     2221 cgatgtcacg gtcggggtcc catcgcatcc ctggcaggcc gagctcggcg ccggtgaacg
     2281 ggtggccctc ctcccgctgg gcctgctgtg gcgcaccgac cgggccgaag tggcgtatga
     2341 ggtgacggcg ccgcccggtg cggcgctcaa gtctcagatc accctgatgc gggccgacga
     2401 gcaagccggg gtcgtttcca atcagcagat cgctcaccct tcccgggcca cccggcagct
     2461 gttccgtcag gtgctcgacc ttcgcaaact caaacctgga ctgtaccgga tcgaggtcac
     2521 cgtgaccgat ggcttgggcg gcctggcgcg gcgggtccgg gagttcgacg tccgctgagc
     2581 agatttgtga tgtgtaaacc ggttagtgcc gtcgctgctg gccttggcgc cgtattgccc
     2641 gcatcgctgg actcacctac tttgccccct cgctgcacgc tcctcttcgg gctcctgctt
     2701 caacactgat gcggtcgagg gttaccatgg cagctgctcc gcgcggccct gttgccttgt
     2761 caccaaatgc catcaccgtt ctggaaaagc ggtatctcct caaggacgac tcggggacgc
     2821 cgatcgagaa cccgtccgat ctgttctggc gggtcgccgg taccatcgcc gagcccgatc
     2881 gcgcctacgg cgcctccgag ggtgcggtcg aggcgctggc cgaagccttc tacgacgtaa
     2941 tggcgcaccg gctgttcatg cccaactcac ccaccctcat gaacgcgggc cggccgttgg
     3001 gacagttgtc ggcctgcttc gtgctgccgg tggaggacac gctctccaac ggtgagagcg
     3061 ggatctacga cacgctccgt tctatggcgc tggtgcatca gtccggcggc ggcaccggct
     3121 tcagcttctc gcagctccgg cccaagaacg acatcgtacg ctccaccatg ggcgtggcgt
     3181 ccgggccggt ctcgttcatg tcgttgtacg acgcatccac cgacgtggtg aagcagggtg
     3241 gcacccgccg gggcgccaac atgggcatcc tccgggtcga ccatcccgac attctcgaat
     3301 tcatcacctg caaggacgac accaccaaga tcaccaactt caatatctcg gtggcggtca
     3361 ccgacgcgtt catgcaggcg gtagagaacg acggtgagta cgatctgatc tctcccgcca
     3421 ccggcaaagt tgccggccgg ctccgggccc ggcaggtgtg ggagaagatc atccacggcg
     3481 cctggaagac cggcgagccg ggcgtgttct tcatcgaccg ggccaaccac tacaacccgg
     3541 ttccccacct cggcagttac gaggcgacca atccctgcgg cgagcagccg ctgctggcgt
     3601 acgacgtctg caacttgggg tcgatcaacc tggccgaatt cgtggtgggc ggacagatcg
     3661 actgggcccg gctgcgccgg acggtgcatc tctgcaccca tttcctcgaa aacgtgatcg
     3721 acgccaatca ctatccgctg gaagagatca cccagctggc ccagcggatc cggcgcatcg
     3781 gcctgggcgt catgggcctg gccgatctct tcatcaagct ggggattgcc tacgacagcg
     3841 aggaggcggt cgagctgggc cgcaagatcc agaagttcgt agacgacgag gccaagaacg
     3901 aatcggagcg gctggccgag atccggggcg tgttccccga gtgggaacgc agcatctggg
     3961 gcccggatga gacctgtgcc cgcgatgcgc acgggctcag gatccgggcc ctgcgccggc
     4021 tccggaactg caacgtcacc acggtcgccc ccaccggcac catctccatc atcaccggct
     4081 gcagctccgg catcgagccg ctctttgccg tcgcgttcat gcggaaccag gccggcgggc
     4141 tgatgcccga cgtcaacgag gacttcaccc gcattgcgcg tgaagagggc tggtactccg
     4201 acgagctgat gcggcggatc gcgggcgagg gccatatccg gctgccggag gttcccgacc
     4261 ggtggaagca ggtgttcgtc acggccaacg agatcaaacc ggagtggcac gtccggatgc
     4321 aggcggcgtt ccaggagcac aacgactcgg ccatctccaa gacggtgaac ttcgccaaca
     4381 gcgccgccga ggcggacgtc gaggtcatct accggctggc gtatcagctg ggatgtaagg
     4441 gcgtcaccgt ctaccgcgat gggagccggg aaatgcaggt cctgtctacc ggcagtacgg
     4501 cccataaagt ggtggaacag gcgggcgggc gggtgggcgg gccggtcgcc atcctgccgg
     4561 gcagcgtgcg ggatctcgcg gcggcggccg gtgaaatggc ggaggtccgg gccgaaaacg
     4621 accggctaag acagctggtg cacgagctcg agtccgaaaa cctgcagcgg cgccagaagc
     4681 gctcccggcc cgacctgctg cgcggctcgg ttcgccggat cgagaccccg ctcggcacgc
     4741 tctacgtgac catcacggaa gacgacaagg ggcaggcgtt cgaagtgttc atgagcctgg
     4801 gcaaggccgg cggcgccatc atggc
//
LOCUS       DASWKS010000331         1870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1663570, whole genome shotgun sequence.
ACCESSION   DASWKS010000331 DASWKS010000000
VERSION     DASWKS010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1663570"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..1789
                     /locus_tag="VGA78_09550"
     CDS             41..1789
                     /locus_tag="VGA78_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894161.1"
                     /translation="MRALLAVVPLILWPDGGSAQSVRLPLRTSGSGVRFAVSFPASRS
                     STPLDGRLLLLLSTDSTAEPRTQISDGPNTQLVFGLDVDGLRPGQDATVDGSVPGYPV
                     ASLLQLPAGRYRVQAVLNRYETFRRSDGQVVKLPPDRGEGQQWNSKPGNLYSMPGWIT
                     LDPRRARTIRIALDQEIGPIPDPPETSYVKHLKIQSRLLSEFWGRPVYLGAHVLLPEG
                     FDQHPEARYPLVVNHGHFPSDFGGFRPEPPDSTIACSYSERFRLDCYNRIQQQLAHQF
                     YRDWTGPGFPRVLLIEIQHPTPYYDDSYAVNSANNGPYGDAIMQELIPEIERRFRGIG
                     QGWARFTYGGSTGGWEAMAVQMFYPDDFNGAWVACPDPIDFRAYTVVNLYQDTNAYWV
                     GSRWKRTPRPALRNWLGHVSATLLETNQREAVLGSKGRSGDQWDIWQAVYSPVGADGY
                     PKPIWDKATGTIDRNVANYWKEHYDLSHILQRDWKTLGPKLRGKLKIYVGDMDNYYLN
                     NAVYLVEEFLKTVTDPPADAEIDYGDRAEHCWNGDHTRPNAYSRLRYHQMFIPRIMDQ
                     IRRNHPAGADTVSWRY"
BASE COUNT          336 a          625 c          594 g          315 t
ORIGIN      
        1 cgtccactct cgaccctcaa tcgtcaatag cgagtccacc atgcgcgctc tgttggccgt
       61 ggttcccctg attctatggc ccgacggcgg gtcggcgcag tcggtccggc tgccgcttcg
      121 caccagcggc agcggggttc ggttcgcggt ctccttcccc gcctcccgga gcagcactcc
      181 gctcgacggc cggttgctgc tgctgctctc gaccgactcg accgccgagc cccgaaccca
      241 gatctccgac gggcccaaca cccagctggt cttcgggctg gacgtcgacg ggctccggcc
      301 cggccaggat gcgacggtgg acggctcggt cccgggatac ccggtcgcca gcctattgca
      361 gctgccggcc gggcgttatc gggtgcaggc ggtgctcaac cggtacgaga ccttccgccg
      421 gagcgacggc caggtggtga agcttccgcc ggaccggggc gaggggcagc agtggaacag
      481 caagccgggg aacctctaca gcatgcctgg ctggatcacc ctcgatcccc ggcgggcccg
      541 gaccatccgg attgccctgg atcaggagat cggtccgatt cccgatcccc cggagaccag
      601 ctacgtcaag cacctgaaga tccagagccg gctgctgagc gaattctggg gccggcccgt
      661 gtacctgggc gcgcacgtgc tcttgccgga gggattcgac cagcatcctg aagcacgcta
      721 tcccctggtg gtgaaccacg gccatttccc gtccgatttc ggcgggtttc ggcccgagcc
      781 gcccgatagc accatcgcct gcagctacag cgaacggttc cggctcgact gctacaatcg
      841 gatccagcag cagctggcgc accagttcta ccgggattgg accggtcccg gtttcccgcg
      901 ggtgctcctg atcgagatcc agcatcccac gccgtattac gacgattcct acgcggtgaa
      961 ctccgccaac aacgggccct acggggacgc gatcatgcag gagctgattc ccgagatcga
     1021 gcggcgcttt cggggcatcg gccagggctg ggcccgcttc acgtacggcg gctccaccgg
     1081 cggctgggag gcgatggcgg tgcagatgtt ctatcccgac gatttcaacg gggcctgggt
     1141 ggcctgtccc gatcccatcg attttcgggc ctacacggtc gtgaacctct accaggacac
     1201 caacgcctac tgggtgggaa gccgctggaa gcggaccccc cggccggcgc tgcggaactg
     1261 gctgggtcac gtcagtgcca ccctcctgga aaccaaccag cgcgaggcgg tgctgggctc
     1321 caagggccgg tcgggagacc aatgggacat ctggcaggcg gtgtattcac cggtgggagc
     1381 ggacgggtat cccaagccga tctgggacaa ggcgaccggc accatcgacc gcaacgtggc
     1441 gaactactgg aaggagcact acgacctgtc gcacatcctg cagcgcgact ggaaaacgct
     1501 ggggccgaag ctgcggggca agctcaagat ctacgtcggc gacatggaca actactatct
     1561 caacaatgcg gtgtatctgg ttgaggagtt tctcaagacc gtgaccgatc cgccggcgga
     1621 cgcggagatc gattacggcg accgggcgga gcattgctgg aacggggacc acacccgccc
     1681 caacgcctac tcccggctcc gctaccacca gatgttcatt ccccggatca tggaccagat
     1741 ccggcgcaat catccggccg gggccgacac ggtgagctgg aggtactgaa ccgacattga
     1801 cgattgacaa ttgacgattg acgattgctc cccgaagcac gagcccacta tcgtcagttg
     1861 tcaattgtca
//
LOCUS       DASWKS010000332         4674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3482858, whole genome shotgun sequence.
ACCESSION   DASWKS010000332 DASWKS010000000
VERSION     DASWKS010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3482858"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="VGA78_09555"
     CDS             <1..836
                     /locus_tag="VGA78_09555"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9894162.1"
                     /translation="RSSPMMLRVEAKASGLEILKFYGYGNETTRTEAKDFYRTDQQHL
                     VLAPSLLLPLNGYLTAEFGPVVKRVTTGLDRESLISNEKPYGVTDQGFAQLGAQGSLR
                     FDTRDSPVAPSRGVLLRLGATAYPALLDAEEAFGSLEGSAATAVTPFRPLTLAGRVSG
                     RTTWGKYPAHEAAYLGGSRTVRSLSSQRFAGDAAIWGNFDSRLRLTTLPFVMRWDFGL
                     LGVADLGRVFYEPEQSSTWHYGLGGGLWAGLPDRSFMGLVNVVAGDDGVKFWAGSAFI
                     F"
     gene            868..1152
                     /locus_tag="VGA78_09560"
     CDS             868..1152
                     /locus_tag="VGA78_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HEX9894163.1"
                     /translation="MTDHHARLRALARRRWRFALGMTGLMILTYFGFILLIAFNKPLV
                     GRLVTPGLTIGILLGALVIAAAWLLTLGYVRWANRVYDPELARIRGEEPR"
     gene            1149..2681
                     /locus_tag="VGA78_09565"
     CDS             1149..2681
                     /locus_tag="VGA78_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HEX9894164.1"
                     /translation="MNSGIGQANPVAIAFFFGFIAITLGITWWAARRTRTTEQFYAAG
                     RTITAGQNGLALAGDYMSAASFLGIAGLVSTTGFDGLIYSTGWLVGWPVVLFLVAEPL
                     RNLGRYTFADVVALHRSQTPLRVAAALGTLATVIFYLIAQMVGAGGLIRLMFGIPYET
                     AIVIVGTVMILYVMLGGMIATTWVQIVKAVLLLGGAVLLALLVLARFGFNPAALFAAA
                     AERYGSGVLAPGRLVASPLDAVSLGMALMFGTAGLPHILMRFFTVPDAQAARRSVFYA
                     TGLIGGFYLLTFVLGFGAMVLVGPDAIRAVDRGGNMAAPLLAEILGGTALMGFIAAVA
                     FATILAVVAGLTLSGAAALSHDLWVNVVKSGNAMSDEQLRVARVATVLLGIVAVALGI
                     TFKGQNVAFMVSLAFAIAASANFPALLLAMFWRRATTSGLLASMLIGTGSTLLLIWLS
                     PTVQVDVLGRAEAPFPLRNPALVTIPLSFLAGVLGSLFTQGLGADETARFAERERQML
                     GA"
     gene            complement(2859..3641)
                     /locus_tag="VGA78_09570"
     CDS             complement(2859..3641)
                     /locus_tag="VGA78_09570"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9894165.1"
                     /translation="MSVTGLRGKVALVTGAASGIGSASAIALAGEGMRVIATDLESAG
                     AARTLERAVGEGHRSRRLDVTSEENWETVLAELGPDGLDVLVNAAGISYGADITETTL
                     AEWRRVLAVNLDGIFLGLRHAVPLMRRQGRGGAVINIASASGLKAAAGASAYCASKAA
                     VVMLSRVAALECSRDRTGIRVNSLLPGAVRTPMWRTMPFFQQLIAEHPSEDAAWSAFA
                     ANLPMGRFAEPEEIAAAVVYLASDPARYVTGTELIIDGGYRT"
     gene            complement(3651..>4674)
                     /locus_tag="VGA78_09575"
     CDS             complement(3651..>4674)
                     /locus_tag="VGA78_09575"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9894166.1"
                     /translation="QFKDLPSPSCVMPRALVLATVFLAVQSLHAQQPAVTPPSREWSA
                     RRFEEVSKTAEDLLWHLQLSEVARVDKVRIATSKPVRMSNPTGQGAGNPLIIPAYVFV
                     PRRLGTPRAPLVVFVHGGVHGDFGLENLHIVQELMEQGWVVIAPEYRGSTGYGEGIYS
                     QIDYGGTEIDDTHDVRAWAVENLPNVDGGRVAIIGWSHGGYQTLFNIFRWPDDYRVAY
                     AGVPVSDLVQRMGYKSQGYRDLFAGFIGKQAVDDPAEYRRRSPVNHVEQLRTPLLVHT
                     TTNDEDVNVMEVQHLIEAFKAAGKSVEYKIYDNAPGGHVFNRIDTRLAKESRAEIWAF
                     LRRHLR"
BASE COUNT          694 a         1566 c         1568 g          846 t
ORIGIN      
        1 tccggtcgtc gcccatgatg ctgcgggtgg aggccaaggc ctcggggctg gagatcctca
       61 agttctacgg ctacggcaac gagacgaccc gtaccgaggc gaaggacttc tatcgcaccg
      121 atcaacaaca tctggtgctg gccccatcgc tgctgctccc gctcaacggc tacctgacgg
      181 cggagtttgg gccggtggtg aaacgggtga cgaccggact ggatcgggaa agcctgatca
      241 gcaacgaaaa accctatggg gtcaccgacc aggggttcgc gcagctggga gctcagggct
      301 cgctccggtt cgacaccaga gattccccgg tcgccccctc gcggggggtg ctgctccggc
      361 tcggagccac cgcctatccg gcgctgctcg acgcggagga ggccttcgga tcgttggaag
      421 ggtccgcggc gaccgcggtg acacccttca gaccgctcac gctcgccgga agggtgagcg
      481 gccggaccac atggggcaaa tacccggccc acgaggcggc ttacctgggc gggtcccgaa
      541 cggtgcggag cctgtcatcc cagcgcttcg cgggcgacgc cgcgatctgg ggcaacttcg
      601 acagccgcct ccggctcacc acgctgcctt tcgtcatgcg gtgggacttc ggcctgctcg
      661 gcgtcgccga cctgggacgg gtattctatg agccggagca atccagcacc tggcattacg
      721 gcctgggagg aggcttatgg gccgggctgc ccgatcgcag cttcatgggg ctggtgaatg
      781 tcgtggccgg agatgatggg gtgaagttct gggcgggttc ggcgttcatt ttctagttcc
      841 cagtcgactc acgagaaagg caccggaatg acggaccacc acgcccggct ccgggccctg
      901 gcgcggcgcc ggtggcggtt tgcgctggga atgaccgggc tgatgatcct cacctacttc
      961 ggcttcattc tgctgatcgc gttcaacaag ccgctggtgg gccgcctggt gacgccgggc
     1021 ctgactatcg ggatcctgct tggcgcgctg gtgatcgcgg cagcctggct gctcaccctg
     1081 ggctacgtgc gctgggccaa ccgggtctac gacccggagc tggcgcggat tcgcggtgag
     1141 gagccgcgat gaacagcggc atcggtcagg ccaatccggt cgccatcgcg ttcttcttcg
     1201 ggttcatcgc gatcaccctg ggcatcacct ggtgggcggc gcggcggacc cggaccaccg
     1261 agcagttcta cgccgcgggt cggaccatca ccgccggcca gaacgggctg gcgctggcgg
     1321 gcgactacat gagcgccgcg tcattcctcg gcatcgccgg gctggtatcc accaccgggt
     1381 tcgacgggct gatctattcc accggctggc tggtgggctg gccggtggtg ctgtttctgg
     1441 tggcggagcc gctccgaaac ctgggccgct acaccttcgc ggacgtggtg gccttgcacc
     1501 gcagccagac accgctccgg gtcgcggcgg cgctcggcac cctggcgacg gtcatcttct
     1561 acctcatcgc gcagatggtc ggggccggcg ggttgatccg gctgatgttc ggcatcccct
     1621 atgagaccgc gatcgtgatc gtgggcacgg tgatgatcct ctacgtcatg ttaggcggga
     1681 tgatcgccac cacctgggtc cagatcgtga aggcggttct gctcctgggc ggcgcggtgc
     1741 tgctcgccct gctggtattg gcccggttcg gcttcaaccc ggcggcgctc ttcgccgcgg
     1801 cggccgagcg ctacggctcg ggagtgctgg ctccgggccg gctggtggcg agtccgctgg
     1861 acgcagtgtc gctgggcatg gcgctgatgt tcgggaccgc cggcctgccc cacatcctga
     1921 tgcggttctt caccgtgccc gacgcgcagg ccgcgcggcg ctcggtgttc tatgccaccg
     1981 gcctgatcgg cgggttctac ctgttgacct tcgtcctcgg cttcggggcg atggtgctgg
     2041 tggggcccga tgcgatccgc gcggtggacc ggggcggcaa catggccgcg ccactgctgg
     2101 ccgagatcct gggtggcacc gcgctgatgg gcttcatcgc ggcggtggcg ttcgcgacca
     2161 tcctggcggt ggttgcgggt ctcacgctct cgggcgcggc ggcgctgtcg cacgacctct
     2221 gggtcaatgt ggtcaagagc ggcaacgcga tgagcgacga gcagctccgg gtggcccggg
     2281 tcgccaccgt gctgctcggg attgtggccg tggcgctggg catcacgttc aagggacaga
     2341 acgtcgcctt catggtctcg ctggcctttg ccatcgccgc gagcgcgaat ttccccgcgc
     2401 tgctgctggc catgttctgg cgccgcgcca ctacctcggg actgcttgcc agtatgctga
     2461 tcgggaccgg gtccactctg ttgttgatct ggctgtcccc caccgttcag gtcgatgtgc
     2521 tgggccgggc cgaagcgcct tttccgcttc ggaatccggc actggtcacc attccactgt
     2581 cgtttctggc cggggtgctg ggctcgcttt tcacccaggg cctgggggcc gacgagaccg
     2641 cccgcttcgc cgagcgggaa cggcagatgc tgggagccta acaaaaaaca ggaagcggga
     2701 gcagggagca ggaagcaggg agcggggagc agggggccgg ccgcccccac tcggtccacc
     2761 tctcccttct tcctccttcc tgctccctgc tccctgcttc ctgcttcctg cttcctgctt
     2821 cctgcttcct gctcccgctt cctgtttttg atatgggttc aggtgcggta gccaccgtcg
     2881 atgatcagct cggtgccggt cacatagcgg gccgggtccg acgccaggta caccaccgcg
     2941 gccgcaattt cctccggttc ggcgaaccgg cccatcggga gattggccgc gaacgcgctc
     3001 caggccgcgt cttcggacgg atgctccgcg atcaactgct ggaagaacgg catggtccgc
     3061 cacatgggcg tgcgaaccgc accagggagc agactgttga cccggatccc ggtccggtcc
     3121 ctggagcact ccagagcggc gacccggctc aacatcacca cagccgcctt gctggcgcag
     3181 taggccgatg cccccgccgc tgccttgagc cccgaagccg aggcgatgtt gatgacggcc
     3241 ccgccccgtc cctgacgccg catcagtgga acggcgtggc gcaggcccag gaagatccca
     3301 tcgagattca ccgccaggac ccgccgccat tccgccagcg tggtctcggt gatgtcggcc
     3361 ccgtatgaga tgcccgcggc attcaccagc acatcgagcc cgtccggtcc cagctccgcc
     3421 aggacggttt cccaattctc ctccgacgtt acatccagcc gccgggaccg gtggccctcg
     3481 ccgacggccc gttccagcgt ccgggccgcg ccggcggact cgaggtcggt ggcgatgacc
     3541 cgcatgccct ccccggccaa cgcaatcgcg gaggcgctgc cgatgccgga cgccgcgccg
     3601 gtcaccagcg ccaccttccc gcgcagcccc gtaacggaca tcgggaggcc ctagcgcaga
     3661 tgacgccgga gaaaggccca gatctcagcc cgtgactcct tcgccaacct ggtgtcgatc
     3721 cggttgaaga cgtgcccccc cggggcgttg tcgtagatct tgtactcgac ggacttgccc
     3781 gccgccttga aggcctcgat cagatgctgc acttccatga cgttcacgtc ctcgtcattg
     3841 gttgtggtgt gcaccagaag cggggtgcgg agctgctcga cgtggttgac cggggagcgg
     3901 cggcggtatt ccgcaggatc atccaccgcc tgcttgccga tgaacccggc gaacaggtcg
     3961 cgatagccct gggacttgta gcccatgcgc tggaccaggt cgctgaccgg aacgccggcg
     4021 taggccaccc ggtagtcatc gggccagcgg aaaatgttga acaaggtctg gtagccgccg
     4081 tgactccagc cgatgatcgc cacgcgcccg ccatcgacgt taggcaggtt ctccaccgcc
     4141 caggcgcgca cgtcgtgggt atcgtcgatc tcggtcccgc cgtagtcgat ctggctgtag
     4201 atgccctccc cgtatccagt actgccgcga tattcgggcg caatcaccac ccacccctgc
     4261 tccatcagtt cctggacgat gtggagattc tccaacccga aatcgccgtg cactcccccg
     4321 tgcacgaaca ccaccagcgg cgccctgggg gtgccgaggc ggcgcgggac gaacacatag
     4381 gcggggatga tcaagggatt gccggctccc tgcccggtgg gattcgacat ccggaccggc
     4441 ttgctggtgg cgatccgcac cttgtcgacc cgggcgactt cgctcagctg aaggtgccag
     4501 agcagatcct ctgcggtctt tgagacttcc tcgaaccggc gggccgacca ctcccggctg
     4561 ggtggagtga cggcaggctg ctgggcatgg agtgattgta ccgcgagaaa aaccgtagcc
     4621 aggaccaggg ctcggggcat gacacagctc ggcgaaggaa ggtccttaaa ctgt
//
LOCUS       DASWKS010000333         1752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3482991, whole genome shotgun sequence.
ACCESSION   DASWKS010000333 DASWKS010000000
VERSION     DASWKS010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3482991"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..1164
                     /locus_tag="VGA78_09580"
     CDS             49..1164
                     /locus_tag="VGA78_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894167.1"
                     /translation="MRDLPPVTQTQVTGVCTVTFAFEIGQDIKLGDCERRLGDSERQT
                     VRSRRRLPLYFEYSPAPLRISQDPPSDSVVGHSVARVEVVLYDFGAAAVTYDIPFQGE
                     FASLVPLSIELQQDTLLSKDARARLGQMLQRIGDAVSRPLLADLIEDYLVFQLDTVGE
                     RLPPRWLVDDARATTARLLRGSAEPLSLEEEVDAVRHQLAFGRGDLTVVDWNAAVLFD
                     PEPEETEILLEFANVQLLELRHLDGELDRSLDLAYDALSRVEKGVWRSLRPHAAALRR
                     LGELQVDSAVLFERVSTAVKLVGDRFLGRVYMAAAQRFHFTDWDRSITRKLGVMEGIY
                     EKLTDRATSRRLEVLEWIVIILIGVEVVLGLVEGGRR"
     gene            complement(1228..1683)
                     /locus_tag="VGA78_09585"
     CDS             complement(1228..1683)
                     /locus_tag="VGA78_09585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894168.1"
                     /translation="MSLLILVGSASAAVAQQTQRMHAGLRGGGNFEYGDAAVGAHLTV
                     PLGRYFEFYPSFDAYFPERGSRLGFNADLKYRIPTSTTVKFYSGAGVGMMRREVADID
                     QHHWGANVLGGIEHRASWVHPFLETRVMFYDRTSVGLVAGVNLTLGGNR"
BASE COUNT          298 a          552 c          572 g          330 t
ORIGIN      
        1 cagctttgcc accgtgcggg cgctgtatcg acaacaggcc gggatcccgt gagagacctt
       61 ccgccagtta cccagactca ggtcacgggg gtctgtaccg tcacgttcgc cttcgagatc
      121 ggccaggata tcaagctggg cgactgcgag cgccggctgg gagacagcga gcggcagacg
      181 gttcgcagtc gccggcggct gccgctctat ttcgaataca gtcccgcgcc gctccgcatc
      241 tcgcaggacc cgccgtcgga ttctgtggtg ggccactcgg tggcgcgggt cgaggtggtg
      301 ctctatgact tcggcgccgc cgcggtcacc tacgacatac cgtttcaggg cgagtttgct
      361 tccctggtcc ccctgagcat cgagctgcag caggacaccc tgctgtcgaa ggatgcccgg
      421 gctcggctcg gccagatgct gcagcggatc ggggacgccg tctcccgccc cctgctggcc
      481 gacctgatcg aggactacct cgtcttccag ctcgacaccg tgggtgagcg actgccaccc
      541 cgctggctgg tggacgacgc ccgggccacg accgcgcggc tgctgcgcgg gtccgccgag
      601 ccgctctcgc tggaagaaga ggtggacgcg gtccgacatc agttggcgtt tggccgaggc
      661 gatctgacag tggtcgactg gaacgccgcg gtgttattcg acccggagcc ggaggagacc
      721 gaaatcctgc ttgagttcgc caacgtgcag ctgttggagc tacggcacct ggatggcgag
      781 ctggaccgct cgctcgacct ggcctacgat gccctgtccc gggtcgagaa aggggtgtgg
      841 cgttcgctcc ggcctcatgc cgcggcgttg cgacggctgg gtgagctgca agtcgattcc
      901 gccgtgctgt tcgagcgggt ctccaccgct gtgaagctgg tgggtgatcg attcctgggc
      961 cgagtctaca tggcagccgc tcagcggttc cacttcaccg actgggaccg gagtatcacg
     1021 cgaaaactgg gcgtgatgga aggtatatac gagaagctga ccgatcgggc gacctcccgc
     1081 cggctcgagg tgctggagtg gattgtgatc atcctgatcg gggtggaggt ggttctcgga
     1141 ctggtcgaag gcggtcgaag gtagtcgaag acggttctca aaggctctct tcgaccgtct
     1201 tcgaccatct tcgaccatct tcgaccgtta tcgattgcca cccagtgtca gattcacacc
     1261 cgccaccagg ccgaccgagg tacggtcgta gaacatcacc cgggtctcga ggaagggatg
     1321 cacccaggag gcccggtgct cgatgccgcc taacacgttg gcgccccagt ggtgttggtc
     1381 gatgtcagcc acttcgcgcc gcatcatgcc gacaccggcc ccgctgtaaa acttcaccgt
     1441 tgtgctggtc gggatccggt atttgaggtc ggcgttgaat cccagccggc tgccgcgctc
     1501 cgggaaatac gcgtcgaacg acggatagaa ctcaaagtac ctgccgagag gcaccgtcaa
     1561 atgggcgccg actgccgcgt caccgtactc gaagtttccg ccgcccctga gacccgcgtg
     1621 catccgttgc gtctgctgag ccacggctgc cgaggcggaa cccaccagga tgagcagact
     1681 caacagccac gtggtcaagc gcgagcgtat cggattgaat gacatgcgtc tctcctttta
     1741 acctgcacag gg
//
LOCUS       DASWKS010000334         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_551338, whole genome shotgun sequence.
ACCESSION   DASWKS010000334 DASWKS010000000
VERSION     DASWKS010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551338"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1537
                     /locus_tag="VGA78_09590"
     CDS             <1..1537
                     /locus_tag="VGA78_09590"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9894169.1"
                     /translation="PLAANGSPTTILAASKLLGRTAGGWSVAALAALTGEETDAAGSQ
                     TIEPRTLFAAARLSRDFTQGRTLIGGFATIVRRDLPPELAALHSGAGALALTGSHRFG
                     NESHIFRALVAASEVTGSAEAIALTQQSPVHYFQRPDNGYAHFDPDRTALTGLAAWTE
                     LARDRGPWVWSAKLATRSPGFEVNDAGFLAQAGQHLGRTTFTRRWLEPRGIFQRTEAG
                     LETFWDADYDGRATGLGAGLRVSSLFRNYVSLVAEAWRNFGGIDLVALHGGPALKRPG
                     NNFFRIETATDPNQPARMGAGLVIRPRDEDVSREIRLTSTLGWRPSSRLDLELTPAYE
                     WNFQREQFVGTGTVGAAERYVVGFLRQRTLRMALRAGFTFTPVLTLQAYAQPFATSGS
                     FPSFSQVVDPAARRSSRRVVSIPEALVERQPDRVSFDLDADGAADLTVPPPDFTVLSL
                     RSTVVLRWEYRNGSAASLVLQHERDDQRAVSEGDLFSVVGRLGSARGTTRLLLKVNYW
                     LPL"
     gene            complement(2264..2464)
                     /locus_tag="VGA78_09595"
     CDS             complement(2264..2464)
                     /locus_tag="VGA78_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9894170.1"
                     /translation="MRSIRSVTLVAGGDRDEYLTAEHLLEVYRLLPKGRLAVIPGSGH
                     TVFASQPDLMLRLIRGLLREPT"
     gene            complement(2483..>2907)
                     /locus_tag="VGA78_09600"
     CDS             complement(2483..>2907)
                     /locus_tag="VGA78_09600"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9894171.1"
                     /translation="LIPALSRDYQVIAIPTRGHGKSELGGRPLSYRLFADDCAAVIRS
                     LKVPPVNLIGFSDGAITAYQVAATHPDVVGRLIAVGGPLGFQDYSAAGAAELDQYNTP
                     AKLAALAPKFVAERKWLMPDSTAWNSFVGQLADMWSQR"
BASE COUNT          463 a          979 c          968 g          497 t
ORIGIN      
        1 cccgctggca gcgaacggga gtccgaccac cattctcgcg gcctccaagc tgctcggcag
       61 aaccgccggc ggttggtcgg tcgcggcgct ggccgcgctc acgggtgagg aaaccgatgc
      121 cgccggctct cagacaatcg agccgcgcac cctgttcgca gcggcccgcc tgagccggga
      181 tttcacccag ggtcgtaccc tgatcggcgg cttcgctacg attgttcggc gggacctgcc
      241 gccggagctc gcggcgctcc actcgggcgc cggtgccttg gcgcttactg gatcccatcg
      301 gttcgggaat gaatcccaca tcttccgcgc cctggtcgcg gcaagcgagg taaccggctc
      361 ggcagaggct atcgcgctta cccagcaatc gccggtccac tatttccagc gtcctgataa
      421 cggttacgcc cacttcgatc cggaccgtac cgcgctgacc ggcctggccg cctggaccga
      481 gctggcccgg gatcgaggac cctgggtctg gagcgccaag ctcgcgaccc gctctccggg
      541 gttcgaagtg aacgacgccg gtttcctggc tcaggccggt cagcatctcg gccgcaccac
      601 gtttacgcgg cggtggctgg agccgcgcgg aatcttccag cgaaccgagg ccggcctcga
      661 gacgttctgg gacgcggatt acgacggacg ggcaaccggg ctgggtgccg gactccgggt
      721 ctcgagcctc ttccggaact acgtcagcct cgtcgccgag gcctggcgaa atttcggcgg
      781 gatcgatctg gtcgccctgc atggcggccc ggcgctcaag cgtccgggga acaacttctt
      841 tcgcatcgag accgccaccg atccgaacca gcccgcgcgc atgggggccg gcctggtgat
      901 acggccgcga gacgaggacg tctcccggga gatccggctg acgtccaccc tcggttggcg
      961 accctccagc cggctggacc tggagctcac cccggcctac gagtggaatt ttcaacggga
     1021 gcaattcgtc ggcaccggta ccgtgggtgc ggccgagcga tacgtggtcg ggttcctgcg
     1081 ccagcgcacc ttgcgcatgg cccttcgtgc gggattcacc tttactcccg tgctcacgct
     1141 ccaggcctac gctcaaccct tcgcgaccag cggctccttc cccagcttct ctcaggtcgt
     1201 tgatcccgcg gcgcgccggt cgagccgccg ggtcgtctcc atccccgaag ccctggtgga
     1261 acggcaaccg gaccgggtct ccttcgacct ggacgccgat ggcgcggccg acctgacggt
     1321 gcccccgcct gatttcacgg tgctctcgct ccgttcgacg gtcgtgctac ggtgggagta
     1381 tcgcaacggg tcggccgcat ccctggtgct gcagcacgaa cgggacgacc agagggccgt
     1441 cagtgagggc gatctgttca gcgtggtggg gcggctcggg tcggcgcggg gaacgacgcg
     1501 gcttctcctc aaggtcaact actggctccc gctctgacgc tgggcgcgat tccgattccc
     1561 gggtgcgggc ccttgcctca acacccccgg gagtagaacc acgcgttcgg ctgccctgtc
     1621 gaggcatgca ggaatccagc cacgcgcagt gacccgtggt cgctcgccgg cggcgcagtg
     1681 gccgggtgcc agaatctcca cctccaacca gaggatgccc cctgacatgc gggtctgttt
     1741 gacgttgatg tcccgttggt gccggtcggc aggcggagag gtggtcagga aggctcttgg
     1801 cgtggcgtag aggcgttggt cccatgcggc ggtgagaaac gccaggccgt ctcggaggag
     1861 atgttcgagg gaatgaaagg caccgctgtg ccgttcagaa acccagccaa gcagccgagt
     1921 cgaatcccga atgaactcga tgaggtacca ggattcccgc tggtcataca ccaccgcgcc
     1981 cagcgcttcg taggcgtact cgcagcttcg acctcctccg gtcgggcgac cgtagccact
     2041 accggccctc ggatggttca gcatggaggg gtattggctc gactctggcc ggcgggatga
     2101 ggccgggtgg gctgtcgggt tcccgcgagc cgaaaaggcc cgggagttcc actagcccga
     2161 tcacccggcc cggctgcagc ggaaccgcgg tcagcacgac gacggcgagg gtcgagataa
     2221 ggcgtcgcgt ggtcggctca gggccgggca tgggccatca ggttcatgtg ggttctctca
     2281 ggagcccccg aatcaagcgg agcatgaggt cgggctggga ggcgaagacc gtatgccccg
     2341 agcctggtat cacggccagc cggcccttgg gcaacaggcg atacacctcg agcaggtgct
     2401 ccgccgtgag gtattcatcc cgatctcccc cggcaaccag ggtcaccgat cgaatcgacc
     2461 gcacggtttc gcgtgagatg tactagcgct gcgaccacat gtcggcaagc tgcccgacga
     2521 agctattcca cgccgttgag tccggcatca gccacttgcg ttctgccacg aacttcgggg
     2581 ccaacgccgc caatttcgcc ggagtgttgt actggtccag ttcggcggcg ccggccgcgc
     2641 tgtagtcctg gaaacccagc ggccctccca ccgctatcaa tcggccgacc acatccgggt
     2701 gcgtcgccgc gacctgatag gcggtgatgg caccatcact gaacccgatc aggttgactg
     2761 gtggcacctt gaggcttcga atgaccgcgg cacagtcgtc ggcgaacagg cggtaggaga
     2821 gcggccgacc gcccagctcc gacttgccgt gaccccgcgt cgggatggct atgacctggt
     2881 agtcgcggct caaggccggg atgaggt
//
LOCUS       DASWKS010000335         3067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3483704, whole genome shotgun sequence.
ACCESSION   DASWKS010000335 DASWKS010000000
VERSION     DASWKS010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3483704"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VGA78_09605"
     CDS             <1..355
                     /locus_tag="VGA78_09605"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEX9894172.1"
                     /translation="DQALLSVIDGAPAPESCAVHSFDHRIIARLGRLRPSLPRGALSS
                     SYPTDPLAPLEASGADTLWQEWQLIDRPLVEQVHRSGRRIIAWTVNDRAIARRLGDLG
                     VDGLCGNYPERLLSP"
     gene            408..1727
                     /locus_tag="VGA78_09610"
     CDS             408..1727
                     /locus_tag="VGA78_09610"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX9894173.1"
                     /translation="MIFALAGAPGLAAQEPAAIMIETYSLANGLKVILAPDRTTQVVT
                     VNVWYDVGSRNETKGRTGFAHLFEHMMFQGSAHVEKAEHFQLVERAGGELNGSTAEDR
                     TNYFQTLPSNRLNLGLWLEAERMRSLAITQENFDNQREAVKEERRLRVDNQPYYGAIF
                     EGMYLLADSARCFPYSHSIIGSMEDLNAAKTEDVQAFFNLYYAPNNATLTVVGDFEPA
                     AAKQLIEQYFTTIPRGQTAPTVQCDQPFNGGEIRRRWPDSKANLPGVLLAYRIPGYQH
                     EDTPALSLLSTILGQGESSRINRSVVREQKLAQFSVSLLNPAAPRRGPGVFLTLAVVN
                     EGVSADSLERGLASEVTRVATAGVTPAELTKSKNAYRTQLITERQQSLFKSEALQIAN
                     LFLGDPQAVNADWKRYLAVTVEDIKRVAGRYLRADNALALLIVPEGK"
     gene            1724..>3067
                     /locus_tag="VGA78_09615"
     CDS             1724..>3067
                     /locus_tag="VGA78_09615"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX9894174.1"
                     /translation="MRTDGRTGGRAGRLLRWVTVALGLSGTPLPAQEYPKTPPAPLPL
                     TAASFPPFQEETLPNGLRILVVENRKQPIVSLSLSFAAGGLFDPAGKEGLADMVAGLL
                     TKGAGTRSAEEIAEAIEGAGGSLSAGAGSDFLSINATVLTPSLSLAFELLADVAAGPT
                     FPEKEVGLLRTQTLSGLQVELSQPASLAERAVRKALYGEHPYGASSTPASVRAITRND
                     IVAFHRARVRPDGALLVLAGDVSLTEVRRLAARSLRPWISPPTPTPTVLDPPARSRPE
                     LVLVHRPGSVQSNILIGNLTFAPNDPRWYAATVANKVLGGGADSRLFMILREQKSWTY
                     GAYSDLLRRRGTGAFIASAEVRTEVTDSALGEMLTQLRRIGSETVPAEEFEAAKGSLV
                     GSYPLSIETAEQVAGAVANARLYGLAPDYVQTYRVRLGAINAEQAQAAAKTVVRPG"
BASE COUNT          522 a         1018 c         1029 g          498 t
ORIGIN      
        1 ggaccaggcc ctgctctcgg tgatcgacgg cgctccagcg ccagagagct gcgcggtgca
       61 ttccttcgac catcggatca tcgctcgatt gggccggctt cgcccttctc tgccgcgcgg
      121 ggcgctgtcg tcctcctacc ccaccgaccc cctggcccct ctggaggcga gcggcgccga
      181 caccttgtgg caggaatggc agctcatcga tcgtcccctg gtggaacaag tacaccggtc
      241 gggtcgccgg attatcgcct ggaccgtgaa cgatcgtgcc attgcccgcc gactgggtga
      301 cctgggggtg gatggcctgt gcgggaacta ccccgagcgt ctcctctccc cctagattgg
      361 cggctcctgg ttcatcgatc gggttctgca tgcgacgcta ttggacaatg atcttcgctc
      421 tggccggcgc tcccggactg gcggctcagg aaccggcggc catcatgatc gaaacctata
      481 gcctggcgaa cggactgaag gtgattctgg ccccggaccg caccacccag gtcgtgacgg
      541 tgaatgtctg gtatgacgta ggctcccgca acgagaccaa gggccggacc ggcttcgccc
      601 acctcttcga gcacatgatg ttccaaggtt cggcccatgt ggagaaggcg gagcacttcc
      661 agctggtgga gcgggccggc ggcgaactca acggcagcac cgcggaagac cggaccaact
      721 atttccagac ccttccttcc aaccggctca acctgggcct ctggctggaa gcggagcgga
      781 tgcgttcgct ggccatcacg caggagaatt tcgacaatca gcgcgaggcg gtgaaggagg
      841 agcggcgcct gcgggtggat aatcagccct actacggggc gatcttcgag ggaatgtacc
      901 tgctggccga cagcgcccgc tgctttccct acagccactc gattatcgga tcgatggagg
      961 acctgaacgc cgccaagacc gaagacgtgc aggccttctt caatctgtat tacgcgccca
     1021 acaacgcgac gctcaccgtg gtgggagatt tcgagccggc cgcggcgaag cagctcatcg
     1081 agcagtactt cacgaccatc ccccggggac agaccgctcc gacggtacag tgcgatcaac
     1141 cgttcaacgg gggcgaaatc cgtcgccggt ggcccgactc caaggcgaac cttcccggcg
     1201 tgctgctggc ctaccgcatc cccggttatc agcacgagga caccccggcc ctctcactcc
     1261 tgagcaccat cctgggacag ggagaaagct cccggatcaa tcgcagtgtg gtgcgggagc
     1321 agaagctggc ccaattctcg gtttccctgc tcaaccccgc ggcgccgcgg cgaggtccgg
     1381 gcgtgttcct cactctggcg gtggtgaacg aaggcgtgag cgccgacagt ctggaacggg
     1441 gcctggcctc cgaggtgacc cgggtcgcca cggcgggagt gactccggcc gagctgacca
     1501 agtccaagaa cgcctatcgg acccagctca tcaccgagcg gcagcagagc ctgttcaagt
     1561 cggaagcgct gcagatcgcg aacctgttcc tgggcgaccc ccaggcggtg aacgccgact
     1621 ggaaacgcta tctggccgtc acggtcgagg atatcaagcg ggtcgcgggc aggtacctgc
     1681 gggccgataa tgccctggca ttgttgatcg ttccggaggg aaaatgagga cggacgggcg
     1741 gacgggcgga cgggcgggcc gcctgctccg gtgggtcact gttgcgcttg ggctcagcgg
     1801 gactccgctg ccggctcagg agtatcccaa gacgccgccg gcgccgctgc cgctgacggc
     1861 ggcttcgttt cctcctttcc aggaagagac cctgcctaac gggctgcgga tcctggtggt
     1921 ggagaatcgc aagcagccca tcgtgtcgct ctcgctctcc ttcgcggcgg gcggactgtt
     1981 cgacccggcc ggcaaggaag ggctggccga catggtggcg ggactgctca ccaaaggcgc
     2041 gggcacccgc agcgcggaag agatcgcgga agccatcgaa ggagccggcg gctccctcag
     2101 cgccggggcc ggatcggatt tcctcagcat caacgccacg gtcctgacac ccagcctctc
     2161 gctggcgttc gagctgctgg cggacgtggc ggctggcccc accttcccgg aaaaggaagt
     2221 ggggctgctc cggacccaga cgctgtcggg actgcaggtg gagctgtcgc agccggcgtc
     2281 gctggccgag cgcgcggtgc ggaaggccct ctacggcgag catccgtatg gagcgagcag
     2341 caccccggcc tcggtccgtg ccatcacccg gaacgacatc gtggcgttcc atcgcgcccg
     2401 ggtgcggccc gacggggcct tgctggtgct ggcgggcgat gtcagcctga cggaggtcag
     2461 gcgtctcgcg gcgcggtcgt tgcgcccctg gatcagtccg cccacgccga ccccgaccgt
     2521 gctggatcct cccgcccgga gccggcccga gctggtgctg gtccaccgcc cggggtcggt
     2581 gcaatccaat atcctgatcg gcaacctgac tttcgcgccg aacgatcccc gctggtacgc
     2641 cgccacggtc gccaacaaag tcttgggcgg cggggcggac agccggctgt tcatgatcct
     2701 gcgggagcag aagagctgga cctacggcgc ctacagcgat ctgctccggc ggcgcggaac
     2761 cggcgccttc atcgccagcg ccgaggttcg gaccgaggtg accgattcgg ccttgggtga
     2821 gatgctgacc caactgcgac gaatcggctc cgagacggta ccagcggagg aattcgaggc
     2881 agccaaggga tcactggttg gcagctaccc cctgtcgatc gagaccgccg agcaggtggc
     2941 cggcgcagtg gcgaacgccc ggctctatgg tctggcgccg gactacgtgc agacctatcg
     3001 agtgcggctg ggcgcgatca acgcggaaca ggctcaggcc gcggccaaga ccgtggtccg
     3061 gcccggc
//
LOCUS       DASWKS010000336         2212 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2410315, whole genome shotgun sequence.
ACCESSION   DASWKS010000336 DASWKS010000000
VERSION     DASWKS010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2410315"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VGA78_09620"
     CDS             complement(<1..994)
                     /locus_tag="VGA78_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX9894175.1"
                     /translation="MSKTYKNFIAGRWTAPATGKYLENRNPADISDLIGRFPDSGPRD
                     IEAAVVSAAKGFQIWSATPAPARGDVLRRVGDLLVDRKDDIARAMTREMGKVLAETGG
                     DVQEGIDTAYYAASETRRLFGNTVPSELRSKWAMSYRRPIGICGLITPFNFPMAIPTW
                     KMFPALACGNSVILKPSEDVPHTATLLVEILLDAGLPPEVIQLVHGRGQTAGRALVEH
                     PTVPVVSFTGSTATGSTIGETCGRMHKRLSLEMGGKNAIVVMDDADLDLALDGVLWGA
                     FGTTGQRCTATSRLLLHEAIEKEFTHRLLERAKALRIGNGLDEQTQMGPLFCEAA"
     gene            complement(1188..1655)
                     /locus_tag="VGA78_09625"
     CDS             complement(1188..1655)
                     /locus_tag="VGA78_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894176.1"
                     /translation="MTTPRDWDKELAEIDKLMSKQPAQVPALAGAPGALPATRGPSPQ
                     PGRPQASGPAPVTRKARFATWFQVLLGAVAGAAMTQWPYANSCGVGLFLYLGAAGVVS
                     LAGLWGSLSSWRRRMGLAHSLSLLVTLWGLLLVGAVVLPRIGYATQAATWFCP"
     gene            complement(1652..>2212)
                     /locus_tag="VGA78_09630"
     CDS             complement(1652..>2212)
                     /locus_tag="VGA78_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX9894177.1"
                     /translation="VRVLAATNKKLDAEIAEGRFREDLYYRLNVVPVSVPPLRERAED
                     IPLLVDYFCQRLAGRSGVPGRRFAPEAVHALQQRLWPGNVRELRNAVERLLILAQGKE
                     VTAQDVGRLLTGVHRATPAAGSGGDPSRTGGTFEEFKSEAERAFLVSKLREYHWNVAE
                     TARALDMPRSNLYKKIERYGLTRESG"
BASE COUNT          358 a          781 c          724 g          349 t
ORIGIN      
        1 gggccgcctc gcagaacaac ggccccatct gggtctgctc gtcgagaccg ttgccgatgc
       61 gcaacgcctt ggcgcgctcc agcaaccgat gggtgaactc cttctcgatg gcctcgtgca
      121 gcagcagccg gctggtggcc gtgcagcgct ggccggtggt gccgaacgcg ccccacaaca
      181 ccccgtcgag cgccagatcg agatcggcat cgtccatcac gacgatggcg ttcttcccgc
      241 ccatctccag cgagagccgc ttgtgcatgc ggccgcaggt ctcgccgatg gtcgatccgg
      301 tggcggtaga accggtgaag gacaccaccg gcaccgtggg atgctccacc agcgcccgcc
      361 ccgcggtctg gccccggccg tgcaccagct ggataacctc gggaggaagg cccgcatcca
      421 gcagaatctc caccagcagc gtggccgtgt gcggcacgtc ctccgacggc ttgagaatca
      481 cgctgtttcc gcaggccagc gccgggaaca tcttccaggt cgggatcgcc atggggaaat
      541 tgaaaggcgt gatcagcccg cagatgccga tcgggcggcg atagctcatc gcccacttgc
      601 tgcgcagctc ggacggcacc gtgttgccga agagccgccg ggtctccgac gccgcgtagt
      661 acgccgtgtc gatcccttcc tgcacatcgc cgccggtctc ggccagcacc ttgcccatct
      721 cgcgggtcat ggcgcgcgcg atgtcgtcct tccggtcgac cagcaggtcc cctacccggc
      781 gcaacacgtc gccccgggcc ggcgccgggg tggccgacca gatctgaaac cccttcgccg
      841 ccgagaccac cgcggcctcg atgtcgcgcg ggccggagtc ggggaagcgc ccgatcaggt
      901 cggagatgtc ggccggattg cggttctcga ggtacttacc ggtcgccggt gcggtccacc
      961 ggccggcgat gaaattctta tacgttttcg acatgggagt cacgcatgag ttccgggttt
     1021 caggttcctt gttccgcggg cggtgcggtg tgccaagcta gggtgcgtgc tgtgtgccgg
     1081 tggtgggtgc caagcacctt gtcctcaggc cgcaccatgc acgttcggca cgtggcaccg
     1141 caccgggcat ggacttggaa ccctgaaccc ggaacccgga acggtcgtca aggacaaaac
     1201 caggtggccg cttgtgtggc gtatccgatc cgaggcaaca ccacggcgcc gaccagcagc
     1261 agcccccaaa gggtgaccag cagcgacaag ctgtgggcca ggcccatccg gcgacgccag
     1321 ctcgacagtg atccccacag tccggcaagg ctcaccaccc cggccgcacc gagatagagg
     1381 aacaagccga cgccgcagct gttggcgtag ggccactggg tcatggctgc gcccgccacc
     1441 gcacccagca gcacctgaaa ccaggtggcg aatcgcgcct tacgggtcac cggcgccggg
     1501 ccggaagcct gaggccggcc gggttgcgga ctcggcccgc gagtggccgg cagggcacct
     1561 ggtgcacccg ccagcgcggg aacctgggcc ggctgcttcg acatgagctt gtcgatctcg
     1621 gccagctcct tatcccaatc gcgtggggtg gtcatcccga ttcccgggtc aggccgtagc
     1681 gctcgatctt cttgtacagg ttggagcgag gcatgtcgag cgcgcgggcc gtctccgcca
     1741 cattccaatg gtactcccgc agcttggaca ccaggaaggc gcgctccgct tcgctcttga
     1801 actcctcgaa agtgccgccg gtccgggatg ggtccccccc gcttccggcg gccggggtgg
     1861 cccgatgcac cccggtgagc aggcgcccga cgtcctgcgc ggtgacctcc ttgccctgcg
     1921 ccaggatgag cagccgctca accgcgttgc ggagctcacg cacgttgccg ggccagagcc
     1981 gctgctgcag ggcgtgaacc gcctccggcg cgaaacgccg cccgggcact ccgcttcgac
     2041 ccgccagtcg ctggcagaaa tagtccacca gcagcgggat gtcctcggcc cgctcgcgca
     2101 gcggcggcac cgagaccggc accacgttga ggcggtagta cagatcttcc cggaaacgcc
     2161 cttcggcgat ttcagcatcc agcttcttgt tggtggcagc cagaacccgg ac
//
LOCUS       DASWKS010000337         8780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3483883, whole genome shotgun sequence.
ACCESSION   DASWKS010000337 DASWKS010000000
VERSION     DASWKS010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8780
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3483883"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /gene="trpS"
                     /locus_tag="VGA78_09635"
     CDS             complement(<1..652)
                     /gene="trpS"
                     /locus_tag="VGA78_09635"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX9894178.1"
                     /translation="MARVFSGIQPSGELHIGNWLGAVQNWVALQDRYECIYCIVDLHA
                     ITFPYDRALLAGRTRDMAIGLLAAGIDPARSILFVQSQVPEHAELQWLFTTVTPLGEL
                     ERMTQFKDKSQRLDSVPAGLLQYPVLQAADILLYRADTVPVGEDQAQHLELTREVARR
                     WNQQFAPDQPFFPEPVALHTEAKRILGLDGQAKMSKSLGNTIAVTESADEIWEKLRP"
     gene            704..1474
                     /locus_tag="VGA78_09640"
     CDS             704..1474
                     /locus_tag="VGA78_09640"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX9894179.1"
                     /translation="MDLLKSAERAARAAAGFLREVSPPRPEGWTTKGTNDFVTQIDRQ
                     AEAIIRESLLADTPEAHLVGEELSPDLVSDGLVWIIDPLDGTTNFLHNYPACAVSIAA
                     ALNGVLQAGVVLRLAPETCCSAARGAGAWRDGKPLRVSEIVDPAHALIGTGFPFKHPE
                     HLPQYLEQFARITPATSGIRRAGSAALDLADVAAGRFDGFWELRLAPWDIAAGVLLVR
                     EAGGVVTDLAGNPRNLDHGPVVAGNPAIHRWLLEIIDD"
     gene            complement(1528..2295)
                     /gene="map"
                     /locus_tag="VGA78_09645"
     CDS             complement(1528..2295)
                     /gene="map"
                     /locus_tag="VGA78_09645"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX9894180.1"
                     /translation="MVTLKSPREIDVMSRAGQIAADTLALVRDLVRPGVTTEELDHAA
                     EGFIRSHPGARPSFKGLYGFPKSLCISINEEIVHGIPSKKRVLREGNIVSVDVGVQLE
                     GLHADTATTIPVGEIAPVAIGLLEVTERALYAGIAMARLGNHVGDIGHAIQQVAEAAG
                     AGIVRELVGHGVGARMHEDPQVPNYGAPKRGPRLREGMTLAIEPMLTTGGIATRTLPD
                     RWTVVTADGSLSAHFEHTVAVTDNGPRILTTAIPIDH"
     gene            complement(2295..2870)
                     /locus_tag="VGA78_09650"
     CDS             complement(2295..2870)
                     /locus_tag="VGA78_09650"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF011105.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEX9894181.1"
                     /translation="MTRPFDILLLGPPGAGKGTQGVLLSQRLGLPKFATGDLLRDAVA
                     RGTPLGQQAKAVMESGGLVSDELILGVVQEELDKPAAAGGVIFDGVVRTVPQAEGVER
                     LLAVRGRRIGHVLFLDVNDAEILARIEKRRTLESRADDAPEAVARRLRAYREQTAPVL
                     AWYEAKDGVHSVSGMGSVEQIAERIRGALGR"
     gene            complement(2992..4305)
                     /gene="secY"
                     /locus_tag="VGA78_09655"
     CDS             complement(2992..4305)
                     /gene="secY"
                     /locus_tag="VGA78_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEX9894182.1"
                     /translation="MTAPRVPNLAIDEELKRKLLFSLLAVLIYRVGAHIAAPGVYVPA
                     LAAFIQNSAAAGFFGLYDALGGGLSRATVFALGIMPYISASIIFQLAGGLVPTVSKMQ
                     KEEEGRKKLTQWTRYMAIFIALSQAYTFTLFTESIPGAIPSPGLSSRLIMVTTLTAGA
                     VFVMWLGEQITERGIGNGMSILITVSILERLWPGLIQTINFIKDGVVSFPGAVVFGAV
                     LLAAVAAVTGMTIASRRIPIQIPRKVMGRGRVREGQKTFIPIRLITAGVMPIIFAQTI
                     IIVPGTIAQFSKIPSLMEISNLFNPGSWVYNLVFAAMIVLFSYFYTSIVFNSVDLAEN
                     LKKQGAFIPGVKPGGATADYIDQVLARVTLPGALFLAIIAIFPIIVSQQVGVQAQFGG
                     TSILIVVGVLLDTIAQVEQHRTLRKYDSFMKSGRIKFRGRQQRYI"
     gene            complement(4305..4772)
                     /gene="rplO"
                     /locus_tag="VGA78_09660"
     CDS             complement(4305..4772)
                     /gene="rplO"
                     /locus_tag="VGA78_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEX9894183.1"
                     /translation="MTDEEKEKTGRLTLSNLKPAPGSHRSRRRVGRGVGSGLGKTSGK
                     GHKGHKARTGGSTNPGFEGGQMPMYRRLPKRGFTNPFKVVAQIVNLRQLDQLTEAEVS
                     PATLLAVGLIGYADRPVKLLGTGEVTRALQVRGLSVSASARAKIEAAGGTVEA"
     gene            complement(4769..5032)
                     /gene="rpmD"
                     /locus_tag="VGA78_09665"
     CDS             complement(4769..5032)
                     /gene="rpmD"
                     /locus_tag="VGA78_09665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEX9894184.1"
                     /translation="MGRNPVVGRQGPAYHAAALPDQPAPQGLRLKQIRSGIGQPETMR
                     RTLKALGLRRHQHEIVVRDTPSLRGMVYKVRHLVEVTPVGEDQ"
     gene            complement(5032..5673)
                     /gene="rpsE"
                     /locus_tag="VGA78_09670"
     CDS             complement(5032..5673)
                     /gene="rpsE"
                     /locus_tag="VGA78_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEX9894185.1"
                     /translation="MADEQTVAGAPSAPTTEPHREPRRGRRGGGGRGEKGPRRDRDRD
                     RDGGSELIEKVVQINRVAKVVKGGRRFSFNALVAVGDGKGKVGIASGKANEVSEAVRK
                     AVEAAKRGMMEVPRVGTTIPHEVLGHHGAGKVLLKPAATGTGIIAGGAVRAVLECCGI
                     SDILTKSLGSNNPHNAVRATMKGLSGLVSLRQLAREREVEPASIGYRPRQEEK"
     gene            complement(5673..6044)
                     /gene="rplR"
                     /locus_tag="VGA78_09675"
     CDS             complement(5673..6044)
                     /gene="rplR"
                     /locus_tag="VGA78_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEX9894186.1"
                     /translation="MRSIHAPKTRSDRRYRRHLRVRKRVSGSAQRPRLVVFRSLKHIY
                     AQLVDDDRGVVLLGVSDQTDGVQVDGSGKVAKGKAAGKLLAERAKGQGITQVVFDRAG
                     YRYHGRVRAVAEGARAGGLEF"
     gene            complement(6044..6583)
                     /gene="rplF"
                     /locus_tag="VGA78_09680"
     CDS             complement(6044..6583)
                     /gene="rplF"
                     /locus_tag="VGA78_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEX9894187.1"
                     /translation="MSRIGKKPVPVPAGVSVDLQGDQISAKGPQGELSRTLPPGITAS
                     LLEGQVVVARASDEPRHKALHGLTRTLVANMLEGVARGYTRALEIQGVGYKAEATKTG
                     LTLTVGLSHPVRYPAPAGIKLTVENNVLVRVAGPSKELVGQVAAELRSVRPPEPYKGK
                     GIRYQGEQVRRKAGKTGAK"
     gene            complement(6592..6987)
                     /gene="rpsH"
                     /locus_tag="VGA78_09685"
     CDS             complement(6592..6987)
                     /gene="rpsH"
                     /locus_tag="VGA78_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEX9894188.1"
                     /translation="MSMTDPVADMLTRIRNACAAGHKRVDVPSSRFKAELARLLRDNH
                     YIADYKELADEGRSVLRLYLRYHNDLPVIRELHRVSTPGLRRYVKCREIPRVKNGLGM
                     AIVSTPKGLMTDRDARRANLGGELVAVVW"
     gene            complement(7003..7188)
                     /locus_tag="VGA78_09690"
     CDS             complement(7003..7188)
                     /locus_tag="VGA78_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003638073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEX9894189.1"
                     /translation="MAKTCWIEKAKRTPKFSSRTVRRCQRCGRSRAVLRRFGLCRICF
                     RDLALKGEIPGVRKASW"
     gene            complement(7206..7892)
                     /gene="rplE"
                     /locus_tag="VGA78_09695"
     CDS             complement(7206..7892)
                     /gene="rplE"
                     /locus_tag="VGA78_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEX9894190.1"
                     /translation="MAEKQAAKPQKKGGPPAPGSGKAKGGGAPAGATDPSPKVREGRP
                     RLQEQYESTIRPRLAKQFALENPHQVPKLMKIVLNVGLGDASKNPKELEAVVTEMAAI
                     TGQRPVVTRAKKSIANFNLRQGVPVGATVTLRGPRMYEFLDRFISLAVPRTRDFRGLP
                     DKSFDGRGNYSFGIREQLIFPEIDYDKVEKIHGMDITIVTSTSRDDLAMALLREFGWP
                     FRGETPAQAA"
     gene            complement(7895..8212)
                     /gene="rplX"
                     /locus_tag="VGA78_09700"
     CDS             complement(7895..8212)
                     /gene="rplX"
                     /locus_tag="VGA78_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEX9894191.1"
                     /translation="MHVTKGDTVQVVSGDDKGKRGRVLRVHPKTGRVTIEGVNVVKRH
                     RRQSPTAEGGIISFPAPIHHSKVMLIDPKTGAPTRIRRRVDADGTVERIAVKSGESIP
                     RSR"
     gene            complement(8277..8645)
                     /gene="rplN"
                     /locus_tag="VGA78_09705"
     CDS             complement(8277..8645)
                     /gene="rplN"
                     /locus_tag="VGA78_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEX9894192.1"
                     /translation="MVQQESILKIADNSGARRALVIRVLGGSRRRYASLGDKVVVAIK
                     DAIPTGQVKKGDVAKAVIVRTAKEVRRRDGSYIRFDENAAVLITDNGEPRATRIFGPV
                     ARELREKKYMKIVSLAPEVL"
     gene            complement(8664..>8780)
                     /gene="rpsQ"
                     /locus_tag="VGA78_09710"
     CDS             complement(8664..>8780)
                     /gene="rpsQ"
                     /locus_tag="VGA78_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003022794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEX9894193.1"
                     /translation="KARNDHDAKAGDTVRIMETRPLAKTVRWRTVAVVERAK"
BASE COUNT         1342 a         3108 c         2823 g         1507 t
ORIGIN      
        1 ccgggcgaag cttctcccag atctcgtcgg ccgattcggt gacggcgatc gtgttgccca
       61 ggctcttcga catcttggcc tgcccgtcga gaccgaggat ccgcttggcc tcggtatgca
      121 acgccaccgg ctccgggaaa aacggctgat ccggcgcaaa ctgctgattc caccggcggg
      181 ctacttcccg ggtgagctcc agatgctgcg cctgatcttc gcccaccggc acggtgtccg
      241 cccggtacag cagaatgtca gccgcctgca gtaccgggta ctgcaacagc ccggccggca
      301 cgctgtcgag gcgctgcgac ttatctttga actgggtcat ccgttccagc tcgcccagcg
      361 gcgtcaccgt ggtgaacagc cattgcagct cggcatgctc cggtacctgc gactggacaa
      421 acaggatcga acgggccgga tcgatcccgg ccgcgagcag gccaatcgcc atgtcccggg
      481 ttcgaccggc aagcagcgcc cgatcgtacg gaaaggtgat ggcgtgcaga tcgacgatgc
      541 agtagatgca ctcgtaccgg tcctggagcg cgacccagtt ctggacggcg ccgagccagt
      601 tcccgatatg tagttcaccc gagggttgta tcccggagaa gacgcgagcc atctcggtgg
      661 caagctagcc gcccgggacc caagccgcaa gatcaattct atcatggact tactgaaatc
      721 ggccgagcgt gcggcccggg ccgcggccgg gttcctccgg gaggtctcgc caccccgacc
      781 cgaggggtgg acgaccaagg gaaccaacga cttcgtcacc cagatcgacc gccaggccga
      841 agcgatcatc cgcgagtcgc tgctggccga tacccccgag gcccacctgg tgggtgagga
      901 gctctccccc gacctggtga gcgacgggct ggtgtggatc atcgacccgc tggacgggac
      961 caccaacttc ctgcataact atcccgcgtg cgccgtgtcg atcgccgccg cgctgaacgg
     1021 ggtgctgcag gcgggcgtcg tgctgcggct ggcaccggag acctgttgca gcgcggcccg
     1081 cggcgctgga gcctggaggg acgggaagcc gctccgggtg tccgagatcg tcgatccggc
     1141 gcacgcgctc atcggaaccg gcttcccctt caagcatccg gagcacctgc cccaatacct
     1201 ggagcagttt gcccggatca cgccggccac gagcggcatc cgccgcgccg gatcggccgc
     1261 gctcgatctg gccgatgtgg ccgcgggccg tttcgacggc ttctgggaat tgcggctcgc
     1321 gccctgggat atcgccgccg gggtcctgct ggtgcgggag gcgggagggg tggtgaccga
     1381 tttagccggt aacccgcgaa acctggatca tggaccggtg gtggccggaa accccgcgat
     1441 ccatcggtgg ctgctcgaaa tcattgacga ttgacagttg tcgattgaca attacgggcc
     1501 gcgatcgtca cgagcaattg tcaatggtca atggtcaatc ggtatggctg ttgtgaggat
     1561 cctcggcccg ttgtcggtca ccgccaccgt gtgctcgaag tgggccgaga gcgagccgtc
     1621 ggcggtcacc acggtccagc ggtcgggcag cgtccgcgtg gcgatgccgc cggtggtgag
     1681 catcggctcg atcgcgaggg tcatcccctc ccgcagccgc ggcccgcgct tgggcgcgcc
     1741 gtagttcggc acctgcggat cctcgtgcat ccgggccccg acgccgtgcc ctaccagctc
     1801 gcgtacgatc ccggctccgg cggcttcggc cacctgctgg atcgcgtggc cgatgtcgcc
     1861 cacgtggttt cccagccgag ccatggcgat cccggcgtac agagcccgtt cggtcacctc
     1921 caggagaccg atcgcgaccg gcgcgatctc accgactggg atggtggtcg cggtatcggc
     1981 gtggaggcct tccagctgca cccccacgtc gacactcacg atgttcccct cgcgcagcac
     2041 ccgtttcttg gacgggatgc cgtgcacgat ctcctcgttg atcgagatgc agaggctctt
     2101 ggggaagccg tagagtcctt tgaaggacgg acgcgccccc gggtgggacc ggatgaaccc
     2161 ttcggcggcg tggtccagct cttcggtcgt gacgccgggc cgcaccaggt cgcggaccag
     2221 ggccagtgtg tcggccgcga tctggccggc ccggctcatg acgtcgattt cgcggggtga
     2281 cttgagggta accatcagcg ccccagcgca ccccggatcc gctccgcgat ctgctccacc
     2341 gagcccatcc ctgacacgct gtgaactccg tccttggctt cgtaccacgc cagcaccggc
     2401 gcggtctgct cccgataggc ccgcagccgg cgcgccaccg cctccggcgc gtcgtcggcc
     2461 cgcgattcca gcgtgcgccg cttctcgatc cgggccagga tctccgcgtc gttcacgtcc
     2521 aggaagagca catgaccgat gcggcggcct cgaacggcca gcagccgctc caccccctcg
     2581 gcctgcggga cggtgcgcac caccccgtca aagatgacac cgccggcggc cgcgggcttg
     2641 tccagctctt cctggaccac gcccaggatc aactcgtcgc tcaccagtcc gcccgactcc
     2701 atcaccgcct tggcctgctg gcccagcggc gtgcccctcg cgaccgcgtc ccgcagcagg
     2761 tcccccgtcg caaacttggg aagacccagg cgctgagaca gcaagacccc ctgggtgccc
     2821 ttgccggcgc cagggggacc gaggaggagg atgtcgaagg gacgcgtcat gtctcattgt
     2881 cgattgacga ttgacgattg acgattacgt ggcactgggt tcgacgccag cgcagcacaa
     2941 ccggcaatcg acaatcgaca atcgaaaatc gtcaatcgtc aatcgtcaat gtcagatgta
     3001 cctctgctgc cggccccgga atttgatccg gccgctcttc atgaagctgt cgtacttccg
     3061 aagggtgcgg tgctgttcta cctgggcgat ggtatcgagc agcacgccca ctacgatcag
     3121 gatgctggtg ccgccgaact gggcctgcac ccccacctgc tgggacacga tgatcgggaa
     3181 gatggcgatg atcgcgagga acaaggcgcc cggcagcgta acccgcgcca gcacctggtc
     3241 gatgtaatcg gccgtggccc cacccggctt caccccgggg atgaaggcgc cttgcttctt
     3301 caggttctcg gccaggtcca ccgaattgaa cacgatggac gtgtagaagt agctgaacag
     3361 cacgatcatc gcggcaaaca ccaggttgta cacccagctg ccgggattga agaggttcga
     3421 gatctccatc agcgagggga tcttgctgaa ctgcgcgatg gtgcccggga cgatgatgat
     3481 ggtctgggcg aagatgatcg gcatcacgcc ggcggtaatc aaccggatcg ggatgaaggt
     3541 cttctggcct tcgcgcaccc ggccccgccc catgaccttg cgaggaatct ggatgggaat
     3601 gcggcgcgag gcgatggtca tgccggtcac ggcggcgacg gccgccagca gtaccgcccc
     3661 gaagaccacc gcacccggga agctgaccac gccgtccttg atgaagttga tggtctggat
     3721 caggcccggc cacagccgct ccagaatcga gacggtgatc aggatgctca tcccgttgcc
     3781 gatgccccgc tcggtgatct gctcgcccag ccacatgacg aacaccgcgc cggcggtgag
     3841 tgtggtcacc atgatcagcc gcgagctcaa gcccggtgac gggatggcgc cggggatgct
     3901 ctcggtgaac agggtgaagg tgtaggcctg cgacagggcg atgaagatcg ccatgtagcg
     3961 ggtccactgg gtcagctttt tccggccctc ttcctccttc tgcatcttgc tcacggtggg
     4021 caccagccca ccggcaagtt ggaagatgat ggaggccgag atgtacggca tgatgccgag
     4081 cgcgaacacg gtggcgcgcg acaggccgcc gcccagggca tcgtacagcc cgaagaagcc
     4141 ggccgcggcc gagttctgga tgaaggccgc gagcgcgggg acgtagaccc ccggcgcggc
     4201 gatgtgggcc ccgacccgat agatcagcac cgcgaggagc gagaacagca gcttgcgctt
     4261 gagctcctcg tcgatggcga ggttggggac gcggggagcg gtcatcaggc ctcgaccgtc
     4321 ccgccggcgg cttcgatctt ggcgcgggcc gatgccgaca ccgacagtcc gcgcacctgc
     4381 agagcccggg tcacctcgcc ggtgccgagc agcttcaccg gccggtccgc atacccgatg
     4441 agcccgaccg cgagcaaggt ggccggcgac acctcggcct cggtcagctg gtccagctgc
     4501 cgcaggttga cgatctgcgc caccaccttg aacgggttgg tgaacccgcg cttgggcagt
     4561 cgccggtaca tgggcatctg cccgccctcg aagcccggat tggtggaacc cccggtccgg
     4621 gccttgtggc ctttgtggcc tttgcccgac gtcttgccga gcccgctgcc gacgccgcga
     4681 cccacccgcc gccggctccg gtgcgagccc ggagccggtt tgaggttcga cagcgtcagg
     4741 cggccggtct tctccttctc ctcgtccgtc actggtcctc cccgaccggc gtcacctcga
     4801 ccaggtgacg caccttgtac accatgcccc ggagcgacgg cgtgtcccgc accacgatct
     4861 cgtgctgatg gcgccggagg cccagcgcct tgagggtgcg ccgcatggtc tcgggctgcc
     4921 cgatgccgga ccggatctgc ttgagcctga ggccctgcgg agccggctgg tccggcaatg
     4981 ccgccgcgtg ataggccggg ccctgccgcc cgaccacggg attccgtccc attacttctc
     5041 ctcctgccgg ggccggtagc cgatgctcgc cggctccact tcgcgctccc gagccagctg
     5101 ccgcagcgac accaggcccg acaggccttt catggtggcc cggaccgcgt tgtgcggatt
     5161 gttggagccg aggctcttgg tcagaatgtc cgagatgccg cagcactcga gcaccgcgcg
     5221 caccgcgcca cccgcgatga tgccggtacc ggtggcggcg ggcttgagca gcaccttgcc
     5281 cgcgccgtga tggcccagca cttcgtgcgg gatggtcgtc ccgacccggg gcacttccat
     5341 catgccccgc ttggccgctt cgaccgcctt gcgcaccgct tcggacacct cgttcgcctt
     5401 gccgctggcg atgcccactt tccccttccc gtcgcccacg gccaccagcg cgttgaacga
     5461 gaaccgccgg ccgcccttca ccaccttggc cacccggttg atctgcacca ccttctcgat
     5521 cagctcgctg ccgccgtcgc gatcccggtc gcggtcgcgc cggggaccct tctcaccccg
     5581 gccaccgccg cctcggcgtc cccgccgggg ttcccgatgg ggctcggtcg tcggggcgct
     5641 cggcgcgccc gctacggtct gctcgtccgc cattagaact ccagtccgcc cgcccgggcg
     5701 ccttcggcca cggcgcgcac ccggccgtgg tagcgataac ccgcgcggtc gaagacgacc
     5761 tgggtgattc cctgcccctt ggcacgctcg gccagcagct tgccggccgc cttgcccttg
     5821 gccactttgc ccgacccgtc cacctgcacg ccgtcggtct ggtcggagac gcctaacagc
     5881 accacgccgc gatcgtcgtc caccagctgg gcgtagatat gcttgagcga ccggaacacc
     5941 accagccggg gccgttgggc cgagccgctc acccgcttgc gcacccgcag atgccggcga
     6001 tagcgccggt cgctccgggt cttgggcgca tgaatggacc gcattacttc gctcctgtct
     6061 tgccggcctt gcggcgaacc tgttcaccct ggtaccggat gcccttgccc ttgtacggct
     6121 cgggcggccg gaccgaacgc agctcggcgg ccacctggcc caccagctcc ttgctcggcc
     6181 ccgccaccct caccagcacg ttgttctcga ccgtgagctt gatcccggcc ggcgccggat
     6241 agcgcaccgg atgggacagc ccgaccgtca gcgtcagccc ggtcttggtg gcctccgcct
     6301 tatagcccac gccctggatc tcgagcgcgc gggtataccc ccgggccacg ccctccagca
     6361 tgttcgccac cagggtccgg gtgagcccat gcagcgcctt gtggcgcggc tcgtcgctgg
     6421 cccgcgccac cacgacctgt ccctcgagaa gcgacgccgt gatgccgggg ggcagggtcc
     6481 gggacagctc gccctgggga cccttcgccg agatctgatc gccctggagg tcgaccgaga
     6541 ccccggcggg caccgggacc ggcttcttgc cgatacgcga cacggcccct cctaccagac
     6601 caccgcgacc agctcgccgc ccagattggc tcggcgcgca tcgcgatcgg tcatgaggcc
     6661 cttgggggtg gacacgatgg ccatccccag gccgttcttg acccgcggaa tctcacggca
     6721 cttcacatag cgccggagcc ccggggtact gacgcggtgg agctcgcgaa tgacgggaag
     6781 gtcgttgtgg tagcggaggt agagtctcag caccgaacgg ccttcgtccg ccagctcctt
     6841 gtagtccgcg atgtagtggt tgtcacgcag cagtcgggcc agctcggcct tgaaccggga
     6901 cgacggcacg tccactcgct tgtgacccgc cgcacacgcg ttgcggatgc gggtcagcat
     6961 atccgcgacg ggatcggtca tgctcatgcg gggctcgtcc tcctaccagc ttgccttgcg
     7021 cacaccggga atttcaccct tgagcgccag gtcgcggaaa cagatgcggc agagaccgaa
     7081 acggcgcagg accgcacgcg accggccaca ccgctggcag cgacgcaccg tccgcgaact
     7141 gaactttgga gtccgcttgg ccttctcgat ccaacaggtc ttcgccatcg aattcctctc
     7201 ttcgtttacg cggcctgggc cggcgtctca ccccggaagg gccacccgaa ctcgcgcagc
     7261 agcgccatgg ccaggtcgtc ccggctggtg gaggtcacaa tcgtgatgtc catcccgtgg
     7321 atcttctcga ccttgtcgta gtcgatctcg ggaaagatca gctgctcccg gatgccgaag
     7381 gagtagttgc cccgcccgtc gaagctcttg tccggcaggc cccggaagtc ccgggtgcgc
     7441 ggcacggcga gggagatgaa gcgatccagg aactcgtaca tccggggccc ccgcagggtc
     7501 acggtggcgc ccaccggcac gccctgccgg aggttgaagt tcgcgatcga cttcttggcc
     7561 cgggtcacca ccggtcgctg gccggtgatg gccgccatct cggtcaccac cgcctcgagc
     7621 tccttggggt tcttgctggc atcccccagc cccacgttga gcacgatctt catcagcttg
     7681 ggaacctggt gcggattctc cagcgcgaac tgcttggcca gccggggccg gatggtcgac
     7741 tcgtactgct cctggagtcg gggccggccc tcgcgcacct tgggcgaggg atcggtggca
     7801 ccggccggcg cgccgccgcc cttggccttg cccgacccgg gggccggggg tccgcccttc
     7861 ttctggggtt ttgccgcctg cttctccgcc atggttaccg gctcctcgga atcgactcgc
     7921 ccgacttcac cgcgatacgc tcgaccgtgc cgtcggcatc cacccgccgg cggatccggg
     7981 tcggggcccc ggtcttggga tcgatcagca tgaccttcga gtggtgaatc ggggccggga
     8041 agctgatgat cccgccttcg gccgtgggcg actggcgccg gtgccgcttc accacgttca
     8101 ccccttcgat cgtgacgcgt ccggtcttgg gatgcacccg caggacccga ccgcgcttgc
     8161 ccttgtcgtc gcccgacacc acctggacgg tgtcgccctt ggtgacgtgc agccgatgcc
     8221 gcaccacggt cttgctgcgg actcgtttgg ctttccgatg aaccagcagc cgcatgtcag
     8281 agcacctccg gagccagcga gacgatcttc atgtacttct tctcgcgcag ctctctcgcc
     8341 accggaccga agatgcgggt ggcccggggc tcgccgttgt cggtaatgag caccgccgcg
     8401 ttctcatcga accggatgta cgacccgtcc cggcgccgga cctccttggc ggtgcggacg
     8461 atcacggcct tggccacgtc gcccttcttt acctggccgg tcggaatcgc gtccttgatc
     8521 gccaccacca ccttgtcgcc aagggaggcg tagcgccgac gcgatccgcc cagcacgcgg
     8581 atcaccaggg cccgccgggc accggaattg tccgcaatct tgagaatgct ctcctgctgc
     8641 accatcgtcc gttctcccgg ggcctacttg gcccgctcga cgaccgcgac ggtgcgccag
     8701 cgaacggtct tcgcgagcgg tcgggtctcc atgatgcgca ccgtgtcgcc tgccttggcg
     8761 tcatggtcat tgcgcgcctt
//
LOCUS       DASWKS010000338         7707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_166562, whole genome shotgun sequence.
ACCESSION   DASWKS010000338 DASWKS010000000
VERSION     DASWKS010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7707
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166562"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VGA78_09715"
     CDS             complement(<1..283)
                     /locus_tag="VGA78_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894194.1"
                     /translation="MRALVLIVGASLVATAVAAQDADRSVKGGGISVSGWKGRVDRRP
                     ASQGKTIADSKFGSEAGALRLSVGPAAVYWNDGNTASGDYQVTATFKEHK"
     gene            447..1265
                     /locus_tag="VGA78_09720"
     CDS             447..1265
                     /locus_tag="VGA78_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894195.1"
                     /translation="MPTMPTALERQPLHSVGFKISHNSYAHGPFDPARFYDGGCRGYE
                     FDISQSPNRLEWCVAHTPGWDPAAPRLGEYLTTLANWCAGGTQPKDFLVVHLDLKAGQ
                     WDHPDLASRLDDYIRTYIPDLDRVFSPSDLFIGPGDLVQHGTALGLPTLWELRGQFAF
                     ILTGSGTGKAMYAAADPPARLCFADDDQLHPYCLDGGNRIFLNASITVLPPNLPQYAR
                     WLRTHRALVSRVYNVNSGIDWNRAMGIGFNLIAVDPPFATTDPGTGIHWPIPPL"
     gene            complement(1392..3908)
                     /locus_tag="VGA78_09725"
     CDS             complement(1392..3908)
                     /locus_tag="VGA78_09725"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9894196.1"
                     /translation="MVRLRTLGTIDLRDAGGAELRAILVQPRRLALLTCLALTTPHGF
                     QRRDRLVALFWPDEDTERARASLNRAIYFLRQILGEGIVLSRGVEEIGLDRKRFWCDA
                     EAFETALDGGDLGRALDLYRGELMRGFFVTRAPAFEEWLELERTRLRTRAAHAAWTRA
                     DAEEAAGNLSFAAQWARRAVELAPFDEVAIRRLLVLLDRHGDRAGAGDVYRRFADDLT
                     AQLGLPPSPETRALIESIRAREAGTHIAGPIAIESPERTGATPAADPGVASEARPPDG
                     RRLRVRATALAAAGLTITAAFLMNQPVTNDPLRVEVTRFENRTGDPALDRLGATAAAR
                     VFDGLVQAGVVRTAAHVPARVAWLGDSLPPRSASLRGRAGTVVSGMYRREAGMVRFHA
                     WITDHRRGDRVWQVTPVSGPVAAVEDLLGHLRQRVAGGVAVLNNSADASLFPVVTSPP
                     TVEAYQEFREGVRLQSARQHGDAVVHFRLAAALDSGFTWPLVYAALSGIRSFQPHGAE
                     VDSILGELNATRDRLSPLERHLVAYLRAVRVEDWEGCYRAIKAAAAIAPDQFSYTQAV
                     RAMQLHRSREAVAALTRPGLDSIYRDDAKNYWFVLTLSYHQLGEHRRELATARAARRL
                     APANPSLLVQEIRALAALRRTAAVLVRLDTLLSLPRDGWLTPGAALMQVGTELRAHGQ
                     EAAAQDALARAIAWYRSRPAVEAAMEVRRFMLGWTLSLAGQLAEADSLFHALHSEYPD
                     NVEYIGQLGVIAARRGDRATARRRSDQLLGREVEAPIPGEESIVWRAKIAALLGDRTA
                     AMRLLVEAFGPQGTMELHGNSDFDGMKDYPPFREFIRPKG"
     gene            4104..4952
                     /locus_tag="VGA78_09730"
     CDS             4104..4952
                     /locus_tag="VGA78_09730"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HEX9894197.1"
                     /translation="MTVLVAVAIALFTQACDSGPTAPVTAGNTESGPSGLAAHSPPAV
                     ATTCGAVVTADLTLESDLNCPGNGFTVSGSDIKINLNGHTVAGAAVGMGILVTGSQGV
                     SIYGGTIRGFLQGIFVAASSGVVIKDNEFTENGTAVLLQASSGNTIKGNVARQNLFRA
                     FMIRPNLAEVVSTNNDVVENLIIDNPTGIFLIRQPGNTIKGNTISGSSVAAIDLAFGG
                     ASGNLIKGNLFTTSGAGIRFGEGWTDNTILGNTFQTNDCAIQGPSAGNTLQGNILSGN
                     TADFCP"
     gene            5006..5905
                     /locus_tag="VGA78_09735"
     CDS             5006..5905
                     /locus_tag="VGA78_09735"
                     /inference="COORDINATES: protein motif:HMM:NF016103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HEX9894198.1"
                     /translation="MPSCLRWVALPLLIGCGGASPGTVRPASFALPESTVVLDGTTGA
                     PVAPPELLRRLAAADLVLLGELHDNPIHHALRGELITALASRHPAIVFEQFAESGQPI
                     LPASGGEDREGWLDRHGFDRTNWKWPLHRPVVEAAIAHGRSLWGSGLSREALRAVVRD
                     GASAAPDHLRGLLAQSPLDSASRATVDRALVEGHCGKLPSSLIGGMRAAQESRDAAMT
                     RALLLSSATGPAWLIAGNGHVRRDVGVPRLLRAAAPGGSVLAVGLLEREADGAVPDPE
                     SRATFDLVIVTPRAVRKDPCAGL"
     gene            complement(5947..7566)
                     /locus_tag="VGA78_09740"
     CDS             complement(5947..7566)
                     /locus_tag="VGA78_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894199.1"
                     /translation="MIDTLRVEVSVFENRTGDPAFDRLGVAAAARVFEGLVQSGVVRT
                     IPEAPARVAWRTKLPWDSLSTRSHRMRGRAGTVVSGAYQREGGMIRVRSWITDNRWGN
                     RVWSVTPASGPASAPESVVDQVRQRVAGGVAVLDDSYYASLLPVTTSPPAVEAYQEFQ
                     EGLQLQSARQDAQALVHFRLAAVLDTGFTWPLVHAALQGVRAFNPRGAEVDSILSQLT
                     AAGDRLSPLERHLVVYLQAVRVEDWEGCYRAIREAAAIAPNQFSYTQAIRAMQLHRPR
                     EALAALTRPHLDSIYREDARNYWFVLTLSYHHLGEHHTELAVARTARRHAPAKASLLA
                     QEIRALAALERTAAVRTRLDTLLTLPRDDWFTPAAALTGVATELQAHGQPEAASEALA
                     RAIAWQESRPPAEAAMEARRYYLAWIFYLAGRLDDADSLFRGLHQDYPDNVDYVGLLG
                     TTAARLGDRTAARSLSDQLKGREIQAPLPGEVSIVWRASIAALLGERAEAMRLLIEAF
                     GRQGTMEMHGNSDFDGMKDYPPFREFIRPKG"
BASE COUNT         1288 a         2643 c         2561 g         1215 t
ORIGIN      
        1 tcttgtgttc cttgaacgtc gcggtgacct ggtagtcgcc cgacgccgtg ttcccatcgt
       61 tccaatagac ggccgctgga cccaccgaca ggcgcagcgc gccagcctcg gacccgaact
      121 tggagtcggc gatggtcttg ccttgtgagg cgggccggcg gtcgacccgg cccttccagc
      181 cgctcacgct gatccctccg cccttgacgc tgcgatcggc gtcctgggcc gccaccgccg
      241 tggcgacgag ggaggccccg acgatcaata ccaaagcacg catgcttcct cctggatgag
      301 tccggtgggc ggcacgttgg cgccacccgg gggtctggat tctatggtgg tggtgtcctc
      361 cctggccagc ggggtgctcc acggttgccg gatcgaaggg cgggagacat gttctccgcc
      421 cccctcaaac cgagctggag ctcctcatgc ccacgatgcc cacggcactg gagcggcaac
      481 ccctccacag tgtcggattc aagatctccc acaattcgta cgcccacggc ccgttcgacc
      541 ccgcccggtt ctacgacggg ggatgccggg gttacgagtt cgacatctcc cagagcccca
      601 accggctgga gtggtgcgtg gcccatactc cgggctggga tccggcggct ccccggctgg
      661 gggagtacct caccaccctg gcgaactggt gcgccggcgg cacccagccc aaagatttcc
      721 tggtggtcca tctggacttg aaggccggac agtgggacca tcccgatctg gcgtcacggc
      781 tcgacgacta catccggacc tatatccccg acctcgaccg ggtgttttcg cccagcgatc
      841 tcttcatcgg cccgggggac ctggtccagc atgggaccgc gctggggctg ccgacgctgt
      901 gggagctgcg ggggcaattc gccttcatcc tcaccggctc cggcaccggc aaggcgatgt
      961 atgccgcggc cgatccgccc gcccggctct gcttcgccga cgacgaccag ctccatccgt
     1021 actgcctgga cggcggcaac cgaatcttcc tgaacgcgag catcaccgtg ttaccgccca
     1081 acctccccca gtacgccagg tggctgcgta cccatcgggc cctggtctcg cgggtctaca
     1141 acgtgaactc gggcatcgac tggaaccgcg cgatgggcat cggcttcaac ctgatcgcgg
     1201 tggacccgcc ctttgcgacc accgatcccg gcaccgggat ccactggccc ataccacccc
     1261 tgtgagaaga agcagggagc agggaacagg aagcagggag caggaagcag gcaggaggag
     1321 ttgagaggga gcccgtctcc cgcctcccct gctccctgct ccctgctccc tactccctac
     1381 tccctgtgct gtcagccctt gggccggatg aactcgcgga aaggcgggta gtccttcata
     1441 ccatcgaaat cgctgttgcc atgcagttcc atggtgccct gggggccaaa tgcctcgacc
     1501 aggagccgca ttgccgccgt ccggtctccc agcagggccg cgatcttggc ccgccagacg
     1561 atggattcct cgcccggaat cggggcctcg acctcccgtc ccaagagttg atcggaccgg
     1621 cgtcgtgccg ttgcgcgatc gccccgtcgc gccgcaataa ctccgagctg accgatgtac
     1681 tccacgttat cgggatactc gctgtgaagg gcgtgaaaga gcgagtccgc ttcggcaagc
     1741 tgtcccgcca gggagagcgt ccagcccagc atgaaccgcc tcacctccat cgctgcctcg
     1801 accgccgggc ggctccggta ccaggcgatg gcacgggcca gggcgtcctg ggctgccgct
     1861 tcctgtccat gggcccgaag ctcggtaccg acctgcatca acgctgcgcc gggagtgagc
     1921 cagccgtcgc gcggtaggga caggagggta tcgagacgaa ccagcactgc cgcggttcgc
     1981 ctcagggcag ccagagcccg gatctcctgc accagcaggc tggggttggc cggcgccagc
     2041 cggcgagcgg cccgcgccgt cgccagctcc cggcgatgct ctcccagttg gtggtatgag
     2101 agggtgagaa cgaaccagta attcttggca tcgtcccggt agatgctgtc caggcctggc
     2161 cgagtgagcg ccgccacggc ttcgcgcgat cgatgcaatt gcatcgcgcg gaccgcctgg
     2221 gtgtagctga actggtcggg agcgatggcc gcggccgcct tgatggcgcg gtagcaccct
     2281 tcccaatctt cgaccctcac ggcccgcagg tacgccacca ggtgccgctc cagcgggctg
     2341 agacgatcgc gcgttgcgtt gagctcgccc agaatggaat cgacttccgc cccatggggt
     2401 tggaaagagc gaatgcctga cagggcggca tacaccagag gccaggtgaa cccactgtca
     2461 agcgcggcag caaggcggaa gtggacaacg gcatcgccgt gctgcctggc cgattgtagt
     2521 ctcacacctt ctcggaattc ctggtacgcc tcgaccgtcg ggggagaggt cacaaccgga
     2581 aacaacgaag cgtcagcgga gttgttgagc acggccacac cccccgcgac ccgctggcgc
     2641 aagtgaccaa ggaggtcctc cactgcggcg accggtcccg ataccggcgt gacctgccac
     2701 acccgatcac ctcgtcggtg gtcggtgatc cacgcatgaa agcgcaccat gccggcttcg
     2761 cgccggtaca tccccgacac gaccgtcccg gcccggcccc gcaggctggc tgagcgggga
     2821 ggaagcgaat cccccagcca cgcgactcgg gccggtacat gcgcagccgt gcgcaccaca
     2881 ccggcctgaa ccagaccgtc gaacactcgc gccgcggcag tagctcccaa ccggtccagg
     2941 gcagggtcac cggtgcggtt ctcgaatcgg gtgacctcga cccggagggg atcgttggtc
     3001 accggttgat tcatgaggaa cgcggccgtg atggtgaggc cggcagccgc cagggccgtg
     3061 gctcgcaccc tcagtcgacg accgtcagga ggccgtgcct cggaagcgac tcccgggtcg
     3121 gcggcagggg tggctccagt ccgctccggt gactcgatcg cgatcgggcc ggcgatgtgc
     3181 gttcctgctt cgcgggcgcg gatggactcg atgagtgccc gcgtttcggg cgacgggggg
     3241 agcccgagct gagcagtaag atcgtccgcg aaccgccgat atacgtcccc ggcgccggcg
     3301 cggtcgccgt gccgatccag cagcaccagc aagcggcgga tcgccacttc gtcgaagggg
     3361 gccagctcca ccgcccggcg ggcccactgg gccgcaaacg acaggttgcc ggccgcctcc
     3421 tcggcatcgg cccgggtcca cgcggcgtgg gcggcacggg tccggagccg ggttcgttcc
     3481 aactcgagcc actcctcgaa cgcaggcgct ctcgtcacga agaaaccgcg catcagctcc
     3541 ccgcggtaga gatcgagcgc ccgacccaga tccccaccat ccagggcagt ctcaaaggcc
     3601 tcggcgtcgc accagaaccg cttgcggtcg agcccgatct cctccacccc ccggctcaga
     3661 acgatgcctt cacccaggat ctggcgcagg aaatagatgg cccggttgag cgaggcgcga
     3721 gcccgctccg tgtcctcgtc gggccagaag agggcgacga gccggtctct gcgctggaag
     3781 ccatggggtg tggtcaacgc aagacaggtg agcagcgcga ggcgccgggg ctgcaccaga
     3841 atcgcccgca gctcggctcc gccggcgtca cgcaggtcaa tggtgccgag ggttcggagc
     3901 ctgaccatgt cacctcgttg aggcggctcg ggcgcgaacc tcacaggtca gtcccatggg
     3961 agcccgggag gagagcacgt ccgtagcgtg ctggtctaag ctaggccccg ccgggccgtc
     4021 ccgcaaagcg acggtggcgg aacgaggtcc cgcgtgtccc gggaccaaat ttccctttgg
     4081 acggagaatt aaccatgcgt gtcatgacgg ttctcgtcgc ggtcgcgatc gccctgttca
     4141 cccaggcatg cgactcagga cccacggccc ccgttaccgc cggcaacacc gagagcggcc
     4201 cgagcggcct cgcggcccat tcgcccccgg cggtcgccac cacctgcggg gccgtggtga
     4261 cggcggacct gacgctggaa agcgatctga actgcccggg caacgggttc acggtgagtg
     4321 ggtccgacat caagatcaac ctgaacggac acacggtcgc gggcgccgcg gtggggatgg
     4381 ggatcctggt gaccggcagc cagggtgtgt cgatctacgg cgggaccatc cgcgggttcc
     4441 tgcagggcat tttcgtcgcc gcgtcctccg gcgtcgtcat caaggacaac gagttcacgg
     4501 agaacgggac ggcggtcctc ctccaggcct cgagtggcaa caccatcaag ggtaacgtgg
     4561 cgcggcagaa tctcttccgc gcgttcatga tccgccccaa cctggccgag gtggtctcca
     4621 ccaacaacga tgtggtcgag aacctcatca tcgacaaccc gaccggcatt tttctcatcc
     4681 ggcaacccgg gaatacgatc aaggggaaca ccatctccgg gagcagcgtt gcggcgatcg
     4741 acctggcgtt cgggggcgcg tccggcaacc tgatcaaggg gaacttgttc accaccagcg
     4801 gggccggcat ccggttcggt gaagggtgga ccgacaacac catcctggga aacacgttcc
     4861 agaccaacga ctgcgcgatc cagggcccga gtgccggcaa tacgctgcaa ggcaacatcc
     4921 tgtcgggcaa cacggcggat ttctgtccgt agaggaaagg agagctttgg gaacggggtt
     4981 tggaatgcac gattagtttt ctgcgatgcc ctcctgcctt cgctgggtgg cgctgccgct
     5041 gctgatcggg tgcggcggcg cttcaccggg tacggttcgg cccgcaagct ttgccctccc
     5101 cgagtccact gtggtcctcg atggcaccac cggggcgccg gtcgcgccgc cggaactgct
     5161 ccggcggctg gcggcggccg atctggtcct gctgggcgag ctgcacgaca acccgatcca
     5221 ccatgcgctg cggggcgagc tgatcacggc gctcgcatcc cgccaccccg ccatcgtctt
     5281 cgagcagttc gcggagagcg gccagccgat cctcccggcg agcggaggcg aggatcgcga
     5341 aggctggctc gatcggcacg gcttcgaccg gaccaactgg aaatggccgc tccaccgccc
     5401 ggtggtcgag gccgcgatcg cccatggccg gagcctgtgg ggcagtgggc tctcacgcga
     5461 ggcactccgc gccgtggtcc gagacggtgc gtcggccgcg cccgaccacc tgcgtggctt
     5521 gctggcgcag tcgccgctcg acagtgcgtc ccgcgccacg gtcgaccggg cgctggtgga
     5581 gggacactgt gggaagttgc cgtcgtcgct gatcgggggc atgcgtgccg cgcaggagag
     5641 ccgggacgcc gccatgaccc gggcgctgct gctctccagc gctaccgggc cggcctggct
     5701 gatcgcaggc aacggccacg tccgccgcga tgtgggcgtg cctcggctgc ttcgcgccgc
     5761 cgctcccggc gggtcggtgc tggcggtcgg gctcctggaa cgcgaagcgg atggcgcggt
     5821 tcccgatccg gaatcgcgtg ccacgttcga cctggtgatc gtgacgccgc gggcagtccg
     5881 caaagacccg tgcgcgggcc tttagagatc tgacggccca gcgacggcga accggtcggc
     5941 tgtccttcag cccttgggtc ggatgaactc gcggaacggc gggtagtcct tcataccatc
     6001 gaaatcgctg ttgccgtgca tttccatggt gccttgccgg ccaaatgcct cgatcaggag
     6061 ccgcatcgcc tcggcccttt ctccgaggag ggcggcgatg ctggcacgcc agacgatgga
     6121 tacctcaccc ggcagcggcg cctggatctc ccggcccttg agttgatcgg aaaggcttcg
     6181 ggccgcggtt cgatccccca gtcgcgcggc agtggttccc aatagaccga catagtccac
     6241 gttgtcggga tagtcctggt ggagcccgcg aaagagtgag tccgcgtcgt ccagccgccc
     6301 cgcaaggtag aatatccagg cgaggtagta ccgcctggcc tccatcgcgg cctcagcagg
     6361 cgggcggctc tcctgccacg cgatggcgcg ggccagtgcc tccgaggccg cctcaggctg
     6421 gccgtgagcc tgaagctcgg tggccacccc ggtaagcgca gcggccggag tgaaccagtc
     6481 gtcccgcgga agggtcagga gggtgtcgag gcgggtccgc accgcggcgg tacgctccag
     6541 agcggccagc gccctgatct cctgagccag caggctggcc ttcgcgggag cgtgccggcg
     6601 ggcggtacgg gctacggcca gctcggtgtg atgctcgccc agatggtgat aggaaagcgt
     6661 aagaacgaac cagtagttcc tggcgtcctc ccggtaaatg ctgtccaggt gaggtcgagt
     6721 aagcgccgcc aaggcttcac gaggccgatg cagttgcatg gcgcggatcg cctgggtgta
     6781 gctgaattga ttgggggcaa tcgctgccgc ctctcggatg gcgcggtagc agccttccca
     6841 gtcctcgacc ctcacggcct gcagatacac caccaggtgg cgctccagcg ggctgagtcg
     6901 atcgccggcc gcggtgagct gcgagagaat ggaatcgact tccgcgccac ggggattgaa
     6961 ggcccggacg ccctgcagag ccgcatgcac cagaggccag gtaaacccgg tgtcgagcac
     7021 cgcagccagg cggaaatgga cgagcgcctg agcgtcctgt ctggccgact ggagctgtag
     7081 tccctcctgg aattcctggt acgcctccac cgccggcgga gaagtcgtta ccggaagcaa
     7141 ggacgcgtaa taggaatcgt cgagcacggc gacgccgccc gcgacccgct gccggacctg
     7201 gtcgacgacg ctctcgggcg cggacgccgg tcccgacgcc ggtgtcacac tccatacccg
     7261 gtttccccaa cgattgtcgg tgatccagct ccgaacccgg atcataccgc cttcacgctg
     7321 atacgcccct gacaccacgg tcccggcccg tccccgcatc cggtgcgaac gggtggatag
     7381 ggaatcccac gggagtttgg ttcgccaggc gacccgcgcc ggagcctcag gaatggtccg
     7441 caccacaccc gactggacca ggccttcgaa cacccgggct gcggcggcaa cgccaagccg
     7501 gtcgaacgca gggtccccgg tgcggttctc gaaaacagaa acctcgactc ggagagtatc
     7561 aatcaactcc ggcctaccac tcaggaacgc ggcggcgatt ccggccccag cggccagcaa
     7621 gactgcggac ctgaccgcaa ggcgccggcc gagtgtctgc cgcggtggag ccagggacgc
     7681 tcgttgacca ctgggcgttc caccatt
//
LOCUS       DASWKS010000339         6841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2038834, whole genome shotgun sequence.
ACCESSION   DASWKS010000339 DASWKS010000000
VERSION     DASWKS010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6841
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2038834"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1772)
                     /locus_tag="VGA78_09745"
     CDS             complement(<1..1772)
                     /locus_tag="VGA78_09745"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9894200.1"
                     /translation="MSGPHELYCLGVPRLVSPAGVDVRFKARKHLALLVYLAVEPRRH
                     QRDLLVDLLWPTASPSAARQSLSTAVSVLRSKLDKDALIGEPGTLRLVPGRARLDLER
                     LESGDVLGNELVLPLEVDGFLEGFEVPDAPEFGHWRDRQHARLLPAIKAALIRLADFA
                     RRTADVRRLSRSADRLLAIDDLAEEGIRARMEASALTGDRLTAIRVYDEWSDRLAREL
                     GATPPPLLEGMALRLRRRGWERPVTSPVPTVRTEQWRDRPFVGRKREYRVLYETWEGV
                     AQGMPRHILIVGDSGVGKTTLADRLATAIGLEGATVSRVRCFELERGIPYAAIGGVLA
                     HLLDRPGAAAANPETLAELGRIIPEVRHRYANLPVTPDTQGESARIRFAEAALDFLTV
                     LMEEHPVVLIVDDFQLADEASLAVLHLLMRRIEHRPWMVIMASREELPEGAVHGARIR
                     DGANYLGVTELELGPMPPEESGLLLDALIQQSTGRPTATERRALLAAAGGYPMALELM
                     FRDWEEHGADSLAISLGAMTVDVATNLDHTYRRLAASLDRALDPTIRTVLHMAAVLDR
                     RLNEFEMYGLIDVSMGQTLTALAEL"
     gene            complement(1922..3247)
                     /locus_tag="VGA78_09750"
     CDS             complement(1922..3247)
                     /locus_tag="VGA78_09750"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HEX9894201.1"
                     /translation="MRYPSRLIGTMSRGAGAAGAGLVLLSVLGLAGCGELLEVQAPSR
                     VLEENLKKASNAKLLVDGARAAFGCAFQAYIQGGALLTDEMEDTQLAAAAWPWDRRDW
                     NGSLGQAYAESSCSAFQIFGVYTPLQTARFTAEEAITAITGFSDEEVPTKPRLLAEAN
                     LLLGYSRVLLGEGFCSAAENQGPQLFPDDFFTLAEASFAEAITQAQAASNTDIQRAAL
                     VGRARARVGLARLPGQPVNTAKYAEAKADAAQVPSGFVYNMPYSQAAIFAQNNIVQRN
                     RLSLLYGVAPNYRNLADPRVVVTAGSRGADAVSTVWYADKYPALNTPIPLATWREAQL
                     IVAEAELAAGNTAAAIGVLDALRGRTGVGLPAYSGPTDAASVQAFLISERSKELFLEG
                     HHFWDINRFNLPLDPPVGAPYPIKGGSYADLRCLPLPDVERLNNPNIGS"
     gene            complement(3275..6265)
                     /locus_tag="VGA78_09755"
     CDS             complement(3275..6265)
                     /locus_tag="VGA78_09755"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HEX9894202.1"
                     /translation="MRLARVLLQGAGFLALLASHAVAQQEVAGIIVDARSNRPIEGVS
                     VAVEGTTTAARTDAQGRFRLANLSGAQVTLRVIRIGYRPLSELVQVGDMALRLEIQEQ
                     AVNLGEIVVTGTAGGQERRSLGNSISTVRAADIQELAPAPDISSLINSRAPGVVVIPG
                     TGQVGAGPRIRIRGMNSFSLSDQPLIYVDGIRVANDVATGIVVQAFGSGIVSRLNDFD
                     PDMIDRIEIIKGPAAATLYGTEAANGVIQIFTKRGQAGERPRVSLSVRQGTQFFMNPE
                     GRIRRPIAQVCPAGQTTGCPLVEWNPVAQEDSLLALGEVDRPLFTNGHMMGYGLNVSG
                     GTNTVRYFAGATFDKDQGIEPTNQYTRFSTTATMNITPGGAWDVQGTLGFVKSKLDQA
                     FEAGAGGIWFSTIFGDPRIVRRADGTPHPNRGFLFGPPEYQWGFRQPSQLINRFTGSV
                     TVNHRPLGWLSHRLTVGQDQTDEGSQQLNRYLPPEWVQFNPGVAALGLKFTQRRTLSY
                     LTLDYNASAQAKVSQNIASTSTFGAQYYRRREDLVWAQGEQFPAPDLETIAATAVVRG
                     FDDFVENTTVGFFGQQQLAWREKLYLTGAIRVDNNSAFGEDFDWVLYPKVSASYVLAE
                     GRSGTLNAIKLRAAYGQSGQQPVSFAALRTWQPVTGGDGGPAVIPQFVGNPNLAPERS
                     TELEVGFEAGLLEDRLAADFTFYRAKTRDAILNQQVAPSTGFPGTRFVNIGAIRNIGF
                     EAQLVATPVQTRTLSLRADFNLSRNTNEVLDLGPGVDSLGAFGPKKGFPVDAIFRKKV
                     ISADFDPATGRAINVLCAGGPDGQTGVACSSAAAGGVYLGVWDPRWEGSVSATATLWG
                     RLRLYSLVDFKLGNRHFDNNLRALCQVFLRCDENFNPQNYDVLYIAELQANNVPQSWV
                     INKADFAKLREVSVSYIFPRSLAQKFGGQEATFTLSARNLHTWTGWSGLDPEAYFVTQ
                     LFTRLEQDNTPQLASFQALLNVTF"
     gene            complement(6360..>6841)
                     /locus_tag="VGA78_09760"
     CDS             complement(6360..>6841)
                     /locus_tag="VGA78_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894203.1"
                     /translation="LSRAKAVALLDLFPRPLADLLPQIRACARRGVAVAVQVYEATTI
                     PGVETVLHAQADTVLQKWNGHWLNCAIDGAELLISFMARDGNAVHQAIWSRSPFLCTV
                     YGSALGAELLASRLQRAVLEHWSDQQVRDTIVRFTRFRAHELPAYRQLTARRSRSKA"
BASE COUNT         1077 a         2341 c         2329 g         1094 t
ORIGIN      
        1 agctccgcca gtgctgtcaa cgtctggccc attgacacat caatgagccc atacatctcg
       61 aactcgttta gccggcggtc cagcaccgcc gccatgtgga gcaccgttcg gatcgtgggg
      121 tccaacgccc ggtccaagct cgccgcgagc cgcctatagg tatggtcgag attggtcgca
      181 acgtccacgg tcatcgcgcc gagggaaatc gccagagaat ccgccccgtg ctcctcccag
      241 tcgcggaaca tcaactccaa ggccattggg tacccgccgg ctgcggccag gagcgcccgg
      301 cgctcggtcg ccgtcggacg gccggtcgat tgctgaatca atgcatccaa taggagcccg
      361 ctctcctcgg gcggcatggg ccccagctcg agctcggtca cgccgaggta gttcgctccg
      421 tcccggatgc gcgcgccgtg cactgcaccc tccggcagct cctcccggga tgccatgatg
      481 accatccagg gccggtgctc gatccgacgc atcagcagat gcagaacggc gagactcgcc
      541 tcgtcggcca gctgaaagtc gtccacgatc aagaccacgg ggtgctcttc catcaggacg
      601 gtcagaaagt cgagcgccgc ttcggcgaag cgaatccgtg ccgactctcc ctgcgtgtca
      661 ggggttacag ggaggttcgc gtagcggtgc cggacctccg gaatgatccg ccccagttcg
      721 gccagcgtct cagggttggc cgccgcggct cccggccggt cgagcaggtg cgcaagcacc
      781 cctccgatgg cagcgtaggg aatccctcgc tccagctcga agcaacgaac ccgggacacg
      841 gtcgcgccct cgaggccgat cgccgtcgcc aggcggtcgg cgagcgtagt cttccccacg
      901 ccgctgtcac ccacaatcag gatgtgcctc ggcatccctt gtgctacccc ctcccacgtc
      961 tcgtagagca cccgatactc ccgttttcgc ccgacgaaag gccgatcccg ccactgctcg
     1021 gtccgcacgg tcggcaccgg cgaggtgacg ggcctctccc acccccgccg tcgaagccgg
     1081 agcgccatgc cttcgagtaa cggcggcggt gtggctccca attccctggc caaccggtcc
     1141 gaccactcgt cgtagacccg gatcgccgtg aggcggtcgc cggtgagcgc gctcgcctcc
     1201 atgcgggcgc ggatcccctc ttcggcgaga tcgtcgatcg cgagaagccg gtcggcagag
     1261 cgactcaatc gcctgacgtc agccgtccgg cgcgcgaagt ccgccagccg aatcagtgcg
     1321 gccttgatcg cgggcaagag acgggcgtgc tgccgatccc gccagtgacc gaactccggg
     1381 gcatccggga cctcgaaccc ttcgagaaag ccatcgacct cgagagggag gacgagctcg
     1441 ttccccagca cgtcacccga ttcgaggcgc tccaggtcga gacgagccct ccccggcacg
     1501 agcctcagcg tgccgggctc gccgatcagg gcatccttgt ccagcttgct tcggagaacc
     1561 gacaccgcgg tggagaggga ctgccgggcg gctgagggcg aggcggtcgg ccacagaaga
     1621 tccaccagca gatcgcgctg gtggcgcctg ggctcgacgg ctaggtagac gagaagcgcg
     1681 aggtgtttcc gcgccttgaa acgaacgtca acgccggccg gggagaccag gcggggaaca
     1741 ccgaggcagt agagctcgtg gggaccggac acggcggcga taggttccgc gacctttgat
     1801 tctgctgtgc cggccttaac caactcttaa acgtgggcct ccgctagggc catcaggggc
     1861 caaagacacg cgagcccggc cgcaccagcg ccgggctcgc agtccctgtc cgccttgccg
     1921 ctcaggatcc gatgttcggg ttgttgagcc gctcgacgtc cggcaacggt aggcacctga
     1981 ggtcggcata actgccaccc ttgatcggat agggagcgcc gaccggagga tcgagcggga
     2041 ggttgaaccg gttgatgtcc cagaagtggt gcccctccag gaacagctcc ttggaccgct
     2101 ccgagatcag gaacgcctgg acgctggccg cgtcggtcgg cccactgtag gccggcagcc
     2161 ccacccccgt tcgtccccgc aacgcgtcga gcaccccgat cgccgccgcg gtattccccg
     2221 ccgccagctc cgcctcagcg acgatgagct gcgcctcccg ccacgtggcc agcgggatcg
     2281 gggtgttcag agccgggtac ttgtccgcgt accacaccgt gctcacggcg tccgccccgc
     2341 gagagccagc ggtcaccaca acccggggat cggccagatt ccggtagttc ggcgccacgc
     2401 cgtacaacag gctcagccgg ttccgctgca cgatgttgtt ctgggcgaaa atcgccgcct
     2461 ggctgtacgg catgttgtag acgaagccgc tcgggacctg ggccgcgtcg gccttcgctt
     2521 cggcatactt cgcggtattg accggctgac cgggcagccg tgccaaaccc acccgcgccc
     2581 gggcccgccc caccagcgcg gcgcgctgga tgtcggtatt gctggcggcc tgcgcctgcg
     2641 tgatggcctc ggcgaagctg gcctcggcca gggtgaagaa gtcgtccggg aagagctggg
     2701 gaccctggtt ctcggccgcc gagcagaacc cttcgcccag cagcacccgg ctgtagccca
     2761 gcagcaggtt ggcctccgcc aggagcctcg gcttggtggg cacctcctcg tccgagaagc
     2821 ccgtgatcgc cgtgatcgcc tcctcggcgg tgaaccgcgc ggtctgcagc ggggtgtaca
     2881 cgccgaaaat ctggaaggcg ctgcaggatg actccgcgta ggcctgcccc agcgacccgt
     2941 tccagtcgcg gcggtcccag ggccaggccg cggcggcgag ctgggtgtct tccatttcgt
     3001 cggtgagcag cgcgcccccc tggatgtagg cctggaaggc gcacccgaac gcggcgcggg
     3061 ccccatccac cagcagcttg gcgttggagg ccttcttcag gttctcctcc aacacccggc
     3121 tcggagcctg cacctcgagc agctccccac agcccgcgag gccgagtacc gagagcaaga
     3181 ccaggcccgc ccccgccgcc cccgcccccc ggctcatcgt cccgatcagt cgagatggat
     3241 atcgcatcgt agtcgtcctt tctcgccgcc cggctcagaa ggtgacgttg agcagggcct
     3301 ggaacgaggc cagctgcggg gtgttgtcct gctccagccg ggtgaagagc tgggtcacga
     3361 agtaggcctc gggatccaac ccgctccagc cggtccaggt gtgaaggttg cgcgccgaga
     3421 gcgtgaacgt cgcctcctgg ccgccgaact tttgcgcgag tgaccggggg aagatgtagc
     3481 tcaccgagac ctcgcgaagc ttggcgaagt cggccttgtt gatcacccag ctctggggca
     3541 cgttgttggc ctgcagctcg gcgatgtaca ggacgtcgta gttctgcggg ttgaagttct
     3601 cgtcgcagcg caggaagacc tggcacagcg cccgcaggtt gttgtcgaag tgccggttgc
     3661 cgagcttgaa gtccaccagg ctgtagagcc ggagccggcc ccacagggtg gctgtcgcac
     3721 tgacggagcc ctcccaccga ggatcccaga cccccaggta cacgccgccg gccgcggccg
     3781 agctgcaggc gacgccggtc tggccgtcgg ggccgccggc gcagagcacg ttgatggccc
     3841 gtccggtggc ggggtcgaaa tccgcgctga tcaccttctt ccggaagatc gcgtctaccg
     3901 ggaacccctt cttcgggccg aaggcgccca ggctgtccac tcccggaccc aggtccagca
     3961 cctcgttggt gttgcgggag aggttgaagt cggcccgcag gctcagggtt cgggtctgga
     4021 ccggggtcgc gaccagctgg gcctcgaacc cgatgttccg gatcgcgccg atattgacga
     4081 agcgggtccc cgggaaaccg gttgaggggg ccacctgctg gttcaggatc gcgtcccggg
     4141 tcttggcgcg gtagaaggtg aaatcggcgg cgagccggtc ctcgagcagc cccgcctcga
     4201 acccgacctc gagctcggtg ctccgctcgg gcgccaggtt cgggtttccg acgaactgcg
     4261 ggatcacggc cggcccgccg tctccgccgg tcaccggctg ccaggtccgg agcgccgcga
     4321 aggacacggg ctgttggccg gactgcccgt aggccgcccg cagcttgatg gcgttcagcg
     4381 tcccgcttcg gccctcggcc agcacgtagc tggcgctgac cttgggatag agcacccagt
     4441 cgaagtcctc cccgaaggcg ctgttgttgt cgacccggat ggccccggtc aggtacagct
     4501 tctcacgcca ggcgagctgc tgctggccga agaatccgac cgtggtgttc tcgacgaagt
     4561 cgtcgaagcc ccggacgacg gcggtcgccg cgatggtctc caggtccggc gccgggaact
     4621 gctcgccctg ggcccagacc aggtcctccc gccggcggta gtactgcgcg ccgaaggtgg
     4681 acgtcgaggc gatgttctgg ctgaccttcg cctgcgcgct ggcgttgtag tccagggtca
     4741 ggtaggagag ggtgcgccgc tgggtgaact tgagacccag ggccgcgacg ccggggttga
     4801 actgcaccca ctcaggcggg aggtagcggt tgagctgctg gctcccctcg tcggtctggt
     4861 cctggcccac ggtgagccgg tggctcagcc agccgagcgg gcggtggttg acggtgacgc
     4921 tgccggtgaa ccggttgatc agctgcgacg gctggcggaa gccccactgg tactcggggg
     4981 gcccgaagag gaagccccga ttcgggtggg gggtcccgtc ggcccgccgg acgatccgcg
     5041 gatcgccgaa gatggtggag aaccagatgc cgccggcgcc ggcctcgaag gcctggtcga
     5101 gcttgctctt cacgaagccc agggtgccct ggacatccca cgctcccccg ggggtgatgt
     5161 tcatggtggc ggtggtggag aaccgggtgt actggttggt cggctcgatc ccctggtcct
     5221 tgtcgaaggt cgccccggcg aaataccgca cggtattggt cccaccgctc acgttgagac
     5281 cgtagcccat catgtggcca ttggtgaaga ggggccggtc cacctcgccc aaggcgagga
     5341 ggctgtcctc ctgggcgacc gggttccact ccaccagcgg gcagccggtg gtctgtcccg
     5401 ccgggcatac ctgcgcgatc ggacggcgaa tccgcccctc ggggttcatg aagaattggg
     5461 ttccctgccg caccgagagg ctgacccggg gccgctcgcc cgcctggcct cgcttggtga
     5521 agatctggat cacgccgttc gccgcctcgg tgccgtagag ggtcgcggcg gcgggaccct
     5581 tgatgatctc gatccgatcg atcatgtccg ggtcgaagtc gttgagccgg gacacgatgc
     5641 cggagccgaa cgcctggacg acgatgccgg tggccacgtc gttggccacc cggatcccgt
     5701 ccacgtagat cagcggctga tcgctgaggg agaagctgtt catgccccgg atccggatcc
     5761 gggggccggc gccgacctgg cccgtccccg ggatcaccac caccccgggg gcccggctgt
     5821 tgatcaggct ggaaatatcg ggggccggcg ccagctcctg gatgtccgcg gctcggacgg
     5881 tgctgatgga gttgcccagg ctccgccgct cctggccgcc cgcggtgccg gtcacgacga
     5941 tctcgcccag gttcaccgcc tgctcctgga tctcgaggcg gagcgccatg tctccgacct
     6001 ggaccagctc ggagaggggg cggtagccga tacggatcac ccgcagggtg acctgggcgc
     6061 ccgaaaggtt ggcgagccgg aaccggccct gggcatcggt ccgggccgcg gtggtggtgc
     6121 cttcgactgc gaccgagacg ccctcgatcg gccggttgga ccgcgcgtcc acgatgatgc
     6181 cggcgacttc ctgctgcgcc actgcgtgcg aggcgagcag ggcgaggaag ccggcgccct
     6241 gcaggaggac cctagcgagc ctcatggtaa aactccgcgt tgggatactc gattgcatcc
     6301 aatctcgggc ggctggcact attactactg ctcactactc cgaagcgcaa tggacggttt
     6361 caggccttcg acctcgatcg ccgggcggtg agttgccggt aggccggcag ctcgtgggct
     6421 cggaaccggg tgaagcgaac gatggtgtct cgcacctgct ggtcggacca gtgctccagc
     6481 acggcccgct gcaggcgcga ggccagcaac tcggcgccca gggcgctgcc atagacggtg
     6541 cacagaaacg ggctccggga ccagatcgcc tggtgcacgg cgttcccatc ccgggccatg
     6601 aaggaaatca acagctcggc gccatcgatg gcgcagttga gccagtgccc gttccacttc
     6661 tgcaacacgg tgtccgcctg ggcgtggagc accgtctcga ctcccgggat cgtggtcgcc
     6721 tcgtacacct gcaccgcgac cgccacgccg cggcgggcgc aggcccggat ctggggcagc
     6781 agatcggcga gagggcgggg gaagagatcc agcagcgcaa ccgctttggc ccgggagagc
     6841 a
//
LOCUS       DASWKS010000340         6240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_553787, whole genome shotgun sequence.
ACCESSION   DASWKS010000340 DASWKS010000000
VERSION     DASWKS010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_553787"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VGA78_09765"
     CDS             complement(<1..320)
                     /locus_tag="VGA78_09765"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9894204.1"
                     /translation="MQHLEDGTLHALVDGEIPSAELGAIQNHLEACVECRDRLEQARL
                     MAGESDTLIGFIDVPAAGRTGGRAGGQWMKPMALAASLIVAVGLGYVGGSARLPAGHL
                     TVPA"
     gene            complement(307..861)
                     /locus_tag="VGA78_09770"
     CDS             complement(307..861)
                     /locus_tag="VGA78_09770"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894205.1"
                     /translation="MEAGSAGTVGAGLPRSLTSFLADLFTQYHASLVRVIYRRTGDRD
                     QAEEIAQEVFARAAAAPPRNPRPWLFAVALNLVREEGRTESRRGRLLQLYREERSQLA
                     PSPDEDLERSERAGRVRAALETLTPRDREALLLKAEGFDYDEIAAALGLARGAIGTTL
                     ARARKRLVEAYRAQDKEAQRNAAS"
     gene            complement(810..3002)
                     /locus_tag="VGA78_09775"
     CDS             complement(810..3002)
                     /locus_tag="VGA78_09775"
                     /inference="COORDINATES: protein motif:HMM:NF025141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HEX9894206.1"
                     /translation="MLKRWNRLVALGLVVSPSSLTAQGWIERPDRPVTIAPVPSPVVR
                     VGSSVRVRIDGRVARFEVEERFRNNGGGLAEGTYLYPLASEAVFTDFSLFQGDRELKG
                     EMMNAEQARGIYEQIVRKQRDPALLSLAGHGLVRAQVFPIQPGETRTVILRYSQVLSR
                     DGEVFRLRYALGARGDGPITINVTASEAERFGVPYSPTHQLEWRADGGRLTIRSECQP
                     RGEFELLLPMRRGLLGTTVVTHAPGGDERYAMIVVSPPAVSADVIMPRDLTLVVDVSG
                     SMSGGKMEQAKAALTQALGSLRRNDRFRLIAFSSAVTEFAAGYSAADPATVRQAREFV
                     DGLEARGGTNIAGALERAFAVARTDRERMGIVLFMTDGLPSVGEQSPERIAAEAAARR
                     RDFRIFPIGVGHDVNTYLLDRLAGEGRGRVEYVPPEADVEHAMGSVLSRIDAPVLTNL
                     RIVRSPVRLLESVPTELPDLFSGEELVVFARYAGSATGELVIEGASGGRRQTFAARVA
                     FPEHETGNAFVAPLWAARRIGELTRQVRLEGSSPALIKEIRELALRHGIITEYTSYLV
                     LEPEARFAANNFRLEELVVTGRSAAPAAQSGERAFKDAKQSSDLSQAKSLAAANEAVR
                     EEAEGLRLGRAGGTAAKRVEGKLFVQRGKVWTDAGHSDSLQVVDVAPYSDAWFALARA
                     LPELVPAFSAGDEVLVAGRRASVKISPAGLSAWKPGQLERLVRDFRGH"
     gene            complement(3147..5207)
                     /locus_tag="VGA78_09780"
     CDS             complement(3147..5207)
                     /locus_tag="VGA78_09780"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9894207.1"
                     /translation="MQHRAAGGLLAALLLSGCSAEEGLRPRFVVLEVVSGSGQSGHVG
                     ANLPTPLVVRVVDQLGEPVAGVPVTWSVSSGGGTVSAVDPNSNAEGLASANFRLGNFL
                     GPQSAQAFLGTGFPVTFTATGVPAPAAILTPTAGTGQSGAVGTTLPQEIVIRVNDAFG
                     NVVPGTEVSFTVTAGGGTVSVPSAISDAGGLVRFRWTLGPVAGTQTVSAAIFGVVPLS
                     INATATAAAAANLMVLSGAGQTAPPGMQLPEPLVVQVTDRFDNPIRDVLVTWTPVGAT
                     AGMVNPTTSRSDANGEAVTAWTLGATGGSKTVRAAVVGVSASAAFDGAGEIIFKSIAA
                     GRFHSCGFDDAGGAYCWGLFGEGQLGMGPAPAGFPSFLPSPQSVLQGANLFATEAGAA
                     SLGAAHSCAIVVSLDAYCWGRNSDGRLGNGGTSNANAPVQVSGSGFRTISAGGFHTCA
                     LTTGDRVFCWGLNSEGQVGATGGTLSPVAVLPGQTFGSVDAGGVHSCAIASGGAAYCW
                     GSNTRGQLGATGAGGSTPVEAEGGILFATVAAGHSHTCALTADGTAYCWGDNDSGQLG
                     VDPVATPMRAFPAPAAPGFSFVTLTAGLDHTCGLTAAGLAYCWGRNSSGELGDGSTVS
                     SSAPVAVGEGLSFEAISAGDRHTCGVTTSRVAYCWGSNQFGQIGDGSPGPFFSLPVKV
                     AYQP"
     gene            5384..5457
                     /locus_tag="VGA78_09785"
     tRNA            5384..5457
                     /locus_tag="VGA78_09785"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5418..5420,aa:His,seq:gtg)
     gene            5559..5631
                     /locus_tag="VGA78_09790"
     tRNA            5559..5631
                     /locus_tag="VGA78_09790"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5592..5594,aa:Trp,seq:cca)
     gene            5739..5811
                     /locus_tag="VGA78_09795"
     tRNA            5739..5811
                     /locus_tag="VGA78_09795"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5773..5775,aa:Glu,seq:ctc)
     gene            5882..5953
                     /locus_tag="VGA78_09800"
     tRNA            5882..5953
                     /locus_tag="VGA78_09800"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5915..5917,aa:Glu,seq:ttc)
     gene            5985..6057
                     /locus_tag="VGA78_09805"
     tRNA            5985..6057
                     /locus_tag="VGA78_09805"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6018..6020,aa:Lys,seq:ctt)
BASE COUNT         1061 a         2149 c         2014 g         1016 t
ORIGIN      
        1 tccgctggaa ccgtcaggtg cccggccggc agccgggcac ttccccccac atatcccaga
       61 cccacagcca cgatgagcga tgccgccaac gccatcggct tcatccactg cccgcctgcc
      121 cgcccgcccg tccgtccggc cgccgggacg tctatgaatc cgatgagggt gtcgctttca
      181 cccgccatca gccgggcttg ctcgagccgg tcacggcact cgacacatgc ctccagatga
      241 ttctggatgg cgcccagctc ggccgacggg atttctccgt cgaccagcgc gtggagagtt
      301 ccgtcctcaa gatgctgcat tacgttgtgc ctccttgtcc tgcgcgcgat aggcctcgac
      361 cagccgcttg cgggcccggg ccagggtggt tccgatcgcg ccacgggcca ggccgagtgc
      421 tgccgcgatt tcgtcgtagt cgaatccttc ggccttgagc agcagcgcct cccgatcccg
      481 cggcgtgagc gtctccagcg cagcccggac tcgaccggct cgttccgatc gttccagatc
      541 ctcgtccggt gacggcgcca gctgggaccg ctcttcgcga tagagctgca gcagccggcc
      601 gcgacgggat tcggtccggc cctcttcccg caccagattg agcgccaccg cgaacagcca
      661 gggccgcggg ttccggggcg gggccgccgc ggcccgcgcg aagacctcct gcgcgatctc
      721 ttccgcctga tcccggtcgc cggtgcggcg gtagatcacc cgcaccagcg acgcgtgata
      781 ctgcgtgaag agatcggcca ggaacgaggt cagtgaccgc ggaagtcccg caccaaccgt
      841 tccagctgac ccggcttcca ggcactgaga ccggccggcg agatcttcac gctggcgcga
      901 cgacccgcca ccagcacttc gtctccggcg gagaatgccg gcaccaactc gggcagtgcc
      961 cgcgccaggg caaaccaggc atcgctgtag ggagccacgt ccacgacctg caggctatcg
     1021 gagtggcccg cgtccgtcca gaccttgccc cgctgcacga agagcttgcc ctccacccgc
     1081 ttggccgcgg tcccgccggc tcgtcccagc cgcaggcctt ccgcctcctc gcggaccgcc
     1141 tcgttggcgg cggcgagcga cttggcctgc gacagatcgg agctctgctt ggcgtccttg
     1201 aacgcccgtt cgcccgactg ggccgcggga gcggccgacc gtcccgtcac gacgagctcc
     1261 tccagccgaa agttgttcgc ggcgaagcgg gcttcgggct cgagtaccag gtacgaggtg
     1321 tactcggtga tgatgccatg acggagcgcc agctcacgga tctccttgat cagcgccggc
     1381 gacgatcctt ccagccgaac ctgccgggtc agctcgccga tccgtcgcgc cgcccagagc
     1441 ggcgccacga aggcattgcc ggtctcgtgt tccgggaagg ccacgcgggc cgcgaacgtc
     1501 tggcgccggc ctccgctggc gccttcgatg accagctcgc ccgtggcgct gccggcataa
     1561 cgtgcgaaca cgaccagctc ctcgcccgag aagaggtccg ggagctcggt cggcaccgat
     1621 tcgagcagcc gaaccggcga gcggacgatc cggaggttgg tcagcacggg cgcgtcgatc
     1681 cgggacagca ccgatcccat ggcgtgctcc acatcggctt cgggtgggac gtactcgacc
     1741 cggccccggc cttctccagc cagccggtcc agcaggtagg tgttcacgtc gtgcccgacc
     1801 ccgattggga agatcctgaa gtccctccgg cgcgccgccg cctcggcggc gatccgctcc
     1861 ggcgactgct ctcccaccga gggcagccca tcggtcatga acagcacgat gcccatccgc
     1921 tcgcggtcgg tgcgcgccac ggcgaaggcg cgttccaggg ccccggcgat gttggtgcca
     1981 ccccgcgcct ccaacccatc cacgaactcg cgggcctggc gaaccgtcgc cgggtcggcg
     2041 gctgaatagc cggcggcgaa ttcggtcacc gcgctggaga aggcaatcag tcggaaccga
     2101 tcgttacggc ggagcgagcc caatgcctga gtcagcgccg ccttggcctg ttccatcttg
     2161 ccgccgctca tcgagcccga cacgtccacc accagggtga ggtcccgggg catgatgaca
     2221 tcggcactca ccgctggggg cgacaccacg atcatggcgt agcgctcatc gcccccgggc
     2281 gcgtgggtga ccacggtcgt gccgagcaga ccgcgccgca tcggcagcag cagctcgaat
     2341 tccccgcggg gttggcattc ggaacggatg gtgagccggc cgccgtcggc ccgccactcg
     2401 agctggtggg tgggagagta gggaaccccg aaccgctcgg cctcggaggc ggtgacattg
     2461 atggtgatgg gcccgtcgcc ccgggcgccg agtgcgtacc gcaaccggaa cacctcgccg
     2521 tcacgagaca gcacctggct gtagcgcagg atcacggtgc gggtttcgcc gggctggatg
     2581 ggaaagacct gggcccggac cagtccgtga cccgccaggg acagcagggc cgggtcgcgc
     2641 tgcttgcgaa cgatctgctc gtagatgccc cgcgcctgct ccgcgttcat catctcaccc
     2701 ttgagctcgc ggtcgccctg aaagagggag aagtcggtga acacggcttc gctggccagc
     2761 ggatagagat aggtcccttc ggccagcccg cctccgttgt tccggaatcg ctcctccact
     2821 tcgaaccggg cgactcggcc gtcgattctg acccggaccg aagacccgac tcgaacgact
     2881 ggtgatggga cgggagcaat ggtgaccggc cggtcgggcc gttcaatcca gccctgggcc
     2941 gtcaggctgc tgggggaaac gactagaccc agcgccacca acctgttcca ccgtttcaac
     3001 atccggaact ccgagtgtct ggacggcggg gagatgtagg gtgctcggga acttgcacac
     3061 ggggtcggaa agggtcggaa aagtcgaaag ggtcggaagc cctacccggt tccgaccttc
     3121 cgaccccttc cgacgattcc gaccggttat ggctggtacg ccaccttgac cggaaggcta
     3181 aagaacggcc cgggcgaccc gtcgccgatc tgcccgaact ggttgctgcc ccagcagtag
     3241 gcgacccggc tggtcgtaac gccacaagtg tggcgatctc cggcgctgat cgcttcgaag
     3301 gaaagtcctt cacccacggc caccggggcg gaggacgaaa cagtgctgcc gtcacccagc
     3361 tcgccgctgg agttgcggcc ccagcagtag gccaggcccg ctgccgtgag gccgcaggtg
     3421 tggtccagcc ccgccgtgag ggtcacgaag gaaaagcccg gggcggcggg ggctgggaag
     3481 gctcgcattg gggttgccac cgggtccacc cccagctggc cggaatcgtt gtcaccccag
     3541 cagtacgcgg tgccgtccgc ggtcaacgca caagtatggc tgtggcctgc ggcgacggtc
     3601 gcgaaaagaa tgcccccttc ggcctccacc ggcgtggaac cgccggcacc ggtcgcgccc
     3661 aactggcccc gggtattgct gccccagcaa taggcggccc cgccgctggc gatggcgcaa
     3721 ctgtgcactc cgcccgcgtc gaccgacccg aaggtctgac ccgggaggac ggccacggga
     3781 gagagggttc cgccggtggc gcccacctgg ccttccgagt tcagtcccca gcagaacacc
     3841 cgatcgccgg tggtcagagc gcaggtgtgg aagccaccgg cgctgatcgt ccggaagccg
     3901 gacccgctga cctgcactgg tgcattggcg ttactggtgc cgccgttccc cagccgacca
     3961 tcactgtttc tcccccagca gtacgcatcg agcgaaacaa cgatggcgca gctgtgcgca
     4021 gcgccgaggc tagccgcccc cgcttcggta gcgaagaggt tcgcaccctg gaggacggat
     4081 tgaggggacg gcaggaacga ggggaaaccg gccggagccg gacccatgcc gagttgaccc
     4141 tcgccgaaca agccccagca atacgcccca ccggcatcat cgaacccaca gctatggaag
     4201 cgccctgcgg cgatggactt gaagatgatc tcgcccgcgc catcgaacgc ggcgctggcg
     4261 gagactccca ccactgcggc ccggactgtt ttggatccgc cggtagcgcc cagcgtccat
     4321 gccgtgacgg cttcaccgtt ggcgtcggag cggctggtgg tcgggttcac catgcccgcg
     4381 gtcgccccca ccggggtcca ggtgaccagc acatcgcgaa tggggttgtc gaaccggtcg
     4441 gtcacctgga ccaccaacgg ttcaggcagc tgcatcccgg gaggagcagt ctgcccggcg
     4501 ccgctcagga ccatcaggtt cgccgccgcg gcggctgtcg cggtggcgtt gatgctgagc
     4561 gggaccacgc cgaagatcgc ggcggaaacg gtctgggtcc ccgcgacggg acccagcgtc
     4621 catcggaagc gcaccagacc gccggcgtcg ctgatggcgg agggaacact gaccgtccca
     4681 cctccggcgg tgaccgtgaa tgacacctcg gtcccgggga ccacgttacc gaaggcgtcg
     4741 ttgacccgga tgacgatttc ctggggtaag gtcgttccca ccgcgcccga ctgaccggtc
     4801 cccgccgtag gggtcaggat ggcggccgga gcgggaacgc ccgttgcggt gaaggtcacg
     4861 gggaagccgg tcccgaggaa ggcctgggcc gattgcggtc ccaggaagtt tcccagcctg
     4921 aagttggctg acgccagtcc ctcggcattg gagtttgggt cgaccgcact gaccgttcca
     4981 ccgccactcg aaacgctcca cgtcacggga accccggcga ccggctcgcc cagctggtct
     5041 accactcgca ccaccagagg cgtcggcagg ttggccccta cgtgcccgga ctgacccgat
     5101 ccggacacga cttccaggac cacgaaccga ggcctgagtc cctcctccgc ggaacaaccg
     5161 gacagcagca gagcggccag caggccgcct gcggcccggt gttgcaaacg acctcgctcc
     5221 atcgctctcc tcaacaaacg tcgcagaatg gccgtaactg gtagccggaa gcccactaag
     5281 atcacctgtg gtgcaaatcc cgcacccaca aaaggggttg acctgaacag gttctgtacg
     5341 atagcttttc cggccctgaa atagtccggt tgttacgggc gtggtggttg tagctcaatc
     5401 ggttagagcg ccggactgtg gctccggagg ttgcgggttc gatccccgtc agccaccctg
     5461 aactacagga ctagggactt aggactgagg actaagtcgt tcggggcatg cggggagcca
     5521 cttagtcttc agcactcagt cctgagtcct ggtgttctag gtccgtagct caattggtag
     5581 agcaccggtc tccaaaaccg ggggttgggg gttcgattcc ctccgggcct gtgaaaagac
     5641 aggactaagg actaaggact taggactaag gacctagtgg ctcctgtgag cgaggagccg
     5701 cttggtcctc agtcctcata tcttagtcct gtagttttgg cgctatcgtc taggggccta
     5761 ggacacagcc ctctcaaggc tggaacacgg gttcgaatcc cgttagcgct actgaattgc
     5821 gaggccgagg tgagcgccct ctgcactggg cattgggcat tgggcattct ctgatgattg
     5881 cggccccatc gtctaacggt caggacacca ctctttcaag gtgggaacag gggttcgatt
     5941 ccccttgggg ctatcccgcc gtgttgcccg ccggcaagct cttcgcgccg ctagctcaat
     6001 tggcagagca agtgactctt aatcactagg ttgtaggttc gattcctacg cggcgcactg
     6061 caccctgaca ggccttaagg actaccttct cgccctggca catccgcccg atagcaaccg
     6121 acaccgatca cgagctggtg gtcgagtgtc ttgatcagtc ggccggctat cacgccatca
     6181 tcgcgatcca ttcctcactg tttcccgatt tcatcgccga cgcgggcgga gtgatcaacg
//
LOCUS       DASWKS010000341         2969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_911480, whole genome shotgun sequence.
ACCESSION   DASWKS010000341 DASWKS010000000
VERSION     DASWKS010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911480"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..394)
                     /locus_tag="VGA78_09810"
     CDS             complement(17..394)
                     /locus_tag="VGA78_09810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894208.1"
                     /translation="MSPVAQGLAFHERHHVEDGPVDLAGVEQRQDVGMLQVGGGGDFL
                     EKPLRSDDGGQLRPHHLERDPALVAQVMGQVDGGHATRAELTLDAVAVGQRRVVDQGI
                     GRQPINSTAGSASPPPLNRTDGG"
     gene            408..2711
                     /locus_tag="VGA78_09815"
     CDS             408..2711
                     /locus_tag="VGA78_09815"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894209.1"
                     /translation="MPVADAVRIAGEVASALDYAHRHGVIHRDIKPENILLHDGQALV
                     ADFGIALAASTAGGARMTETGLSLGTPHYMSPEQAMGERTLDGRTDVYALGCILHEML
                     AGEPPFTGPTAQTIVAKVMADAPRPLSQLRKTVSPAVEDAVLTALEKLPADRFATPAA
                     FAEALRSDRPGAARPAGRAAAPRRTFTLPMLAGAALLTAILGYALGRLGAPAQPAVPI
                     LGRATPVTWEPGLEVHPAISPDGRFVAYAAGTSVRLRVYVRPVAGGRAIPLTTDTLAV
                     ETNPRWHPDGTRVLFLARGGVFSAPASGGTVRQELPATPDGIMSADWSPDGRSLFYAT
                     GDSLFLRDAEGTARPLAGFPEPSLCSWSPDGGSIACASSALYQAAGQQFGNLSPSRIA
                     VYRVSDGSVSTVTDSSSLNHSPVWSPDGRALYFISNRHGTRDIYAQRLTTAGRPSGEP
                     RRLTTGLGAHSLSLSGDGSRLAYSVLSARANVWSHPLPGRGPVPATQLSRVTSGNQIT
                     ENLQVSYDGQWLVFDSNLGGNSDVYRLSLEGGEPERITTDPSDDFSPDLSPDGREIVF
                     HSWRAGSRDIYVQPLDGGPVQRVTSSPGQEWTARWSPDGSALLYSELSPSGAVWLVRR
                     NPDRSWGEPVKRVDYGLQPSWSPDGRFAAFGSTNLRGPISIVPIDSGPIRVLVRPEEL
                     GLRTIAQPRWSEDGRTIYFKGSDALGNASIWSIPAAGGTPALLVRFDDPGRPSYRPNW
                     DHTRGRMYFTMEERESDVWVIDARREE"
BASE COUNT          451 a         1025 c         1017 g          476 t
ORIGIN      
        1 gcgatgcagg ccccgctcag ccaccatcgg tacgatttaa gggaggcggg gacgcacttc
       61 ctgcagtaga attgatgggt tgcctaccga taccctgatc gaccaccctg cgctggccga
      121 ccgctaccgc atcgagcgtg agctcggcgc gggtggcatg gccaccgtct acctggccca
      181 tgacctgcgc caccagcgcc gggtcgcgct caaggtgatg cggccggagc tggccgccgt
      241 catcggagcg gagcggtttc tccaggaaat caccaccacc gccaacctgc agcatcccca
      301 catcctggcg ctgttcgact ccggccagat cgacgggacc gtcttctacg tgatgccgtt
      361 cgtggaaggc gagtccctgc gcgaccgggc tcaaccggga gaagcagctg ccagtggccg
      421 atgcggtgcg gatcgcgggc gaagtggcga gtgcgctgga ttacgcccac cggcacggtg
      481 tgatccaccg cgacatcaag ccggagaaca tcctgctcca cgatggccag gcgctggtgg
      541 ccgacttcgg catcgccctc gcggccagca ccgccggggg cgcccggatg accgagaccg
      601 gcctcagtct gggcacgccg cactacatga gccccgagca ggccatgggg gagcggaccc
      661 tcgacggccg caccgatgtc tatgcgttag gctgcatcct gcacgaaatg ctggcgggcg
      721 agccgccctt caccggaccg accgcccaaa ccatcgtggc gaaggtgatg gcggacgctc
      781 cccggccgct gagccagctc cggaaaacgg tgtcgcccgc ggtggaagac gcggtgctga
      841 ccgcgctgga aaagctcccc gccgatcgct tcgctacgcc cgcggctttc gcggaagcct
      901 tgcggtcgga ccgcccgggg gccgcgcggc ccgccggcag ggcggccgcc ccgcgccgga
      961 cgttcacgct tcccatgctg gcaggcgccg cgctcctgac agcgatcctg ggttatgcgc
     1021 tgggccggct cggcgcgccg gcccaaccgg ccgttcccat tctcggccgg gccacgcccg
     1081 tgacctggga gccggggctc gaggtccatc ccgcgatttc gccggacggc cgcttcgtcg
     1141 cctacgccgc ggggacttcg gtccgcctcc gggtgtatgt ccggccggtg gcgggcgggc
     1201 gcgccattcc gctcacgacc gatacgctcg ccgtcgagac caatccccgc tggcatcccg
     1261 acgggacccg ggtgctgttc ctggcgcggg gcggtgtgtt cagcgcgccc gcctcgggcg
     1321 gaacggtgcg gcaggagctg cccgccacgc ctgacggcat catgtcggcc gactggtcac
     1381 ccgacggccg gtcgctgttc tatgccaccg gcgattcgct gtttctgcgg gacgccgaag
     1441 ggacggcgcg gccgctggcc ggctttcccg agccatcgct gtgctcgtgg tctcccgacg
     1501 gcggctcgat cgcgtgtgcc tcgagcgccc tgtaccaggc cgccggacag caattcggca
     1561 atctctcgcc cagccgcatc gcggtgtacc gggtgtccga cggctcggtc tccacggtca
     1621 ccgacagcag ctcgctcaat cacagcccgg tgtggtcgcc ggacggccgc gcgctgtact
     1681 tcatctccaa tcgccacggc acgcgcgaca tctatgccca gcgcctgacc accgcggggc
     1741 ggccgtcggg cgagccgcgc aggctgacca cggggctggg cgcccattcg ctctcgctct
     1801 ccggcgatgg atcgcgcctg gcctacagcg tgctgtcggc cagggcgaat gtgtggtccc
     1861 atccgcttcc gggccgcgga ccggtgccgg ctacacagct gagccgggtc acgagcggga
     1921 accagatcac ggagaacctg caggtatcct acgacggcca gtggctggtc ttcgattcga
     1981 acctgggagg caactcggac gtctaccggc tgtcgctcga gggcggggag ccggagcgga
     2041 tcaccaccga cccgagcgac gacttctcgc ccgatttgtc gcccgacggc cgcgagatcg
     2101 tgttccattc gtggcgggcg ggctcgcgtg atatctacgt ccaaccgctc gatggcggtc
     2161 cggtgcagcg ggtcacatcc tcgcccgggc aggaatggac cgcgcggtgg tcgcccgacg
     2221 gctcggcgct gctctattcg gagctgagtc cttcgggggc cgtctggctg gtccggcgca
     2281 atccggaccg aagctggggt gagccggtca aacgggtgga ctacggactc cagccgagct
     2341 ggtctcccga cggccggttt gccgccttcg gcagtacgaa cctgaggggc ccgatcagca
     2401 tcgtaccgat cgattccggc ccgatcaggg tcctggtgcg gccggaggag ctggggttgc
     2461 gcaccatcgc ccagccgaga tggagcgaag acgggcgcac catctatttc aagggcagcg
     2521 acgcactcgg caacgcttcc atctggtcga ttcccgccgc cggaggaaca cccgccctgc
     2581 tggttcggtt cgatgatccc ggccgcccgt cataccggcc gaactgggac cacacccggg
     2641 gacggatgta cttcacgatg gaagagcggg aaagcgatgt ctgggtcatt gacgcaaggc
     2701 gtgaggaatg aggagtgagg agtgaggagg actaacgagg cgcgcaatga cgcatgagcg
     2761 tctggcgcat gccgaagtaa gcgccttgtc cctccacgac ttcttcgaat ggctgcatcg
     2821 cacgccctgg agcgtgtcct ggtggtcgga gcggtcattg tgctctggcc gcaactcgcg
     2881 aagctggggc cgctctatga gctgacgccc agtaccgagt actgattgct gagtttcacc
     2941 gcggtcatcc cgagcggagc gagggatct
//
LOCUS       DASWKS010000342         2906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2413190, whole genome shotgun sequence.
ACCESSION   DASWKS010000342 DASWKS010000000
VERSION     DASWKS010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2413190"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..519
                     /gene="mraZ"
                     /locus_tag="VGA78_09820"
     CDS             91..519
                     /gene="mraZ"
                     /locus_tag="VGA78_09820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEX9894210.1"
                     /translation="MFLGQFKYTTDTKGRLTIPVRFRAALASGAYLIQGFERNLIVHT
                     SENFHGIAKKASALSSTQPGARAVRRVIFGGATEVALDSAGRINIPPFLRDYAGLDGE
                     VYLVGVGESFEIWRAEEWEKQLASVTDPEANAQRFADFEL"
     gene            532..1443
                     /gene="rsmH"
                     /locus_tag="VGA78_09825"
     CDS             532..1443
                     /gene="rsmH"
                     /locus_tag="VGA78_09825"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:TIGR00006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX9894211.1"
                     /translation="MDRRSPEPHTPVLYQQVLSALDPQPGCLMIDGTIGAGGHAEGIL
                     ERSAPSGQLLGLDRDPVALPLALQRLERFGARLQLRQGSFRDLSAHAAAVGWQAVDGI
                     LLDLGLSSMQLADPRRGFSFQSEGRLDMRFDPGQELEAAELVNRLPEPELASVIARYG
                     EDPRARRIARAIVAARPLQTTTQLAEVVAWAVRSRGSRTHPATRTFQALRIAVNEELT
                     ALEEALPQTVELLKPGGRLVVLAFHSLEDRLVKRFCREASLSTEERPARLRRITRKPV
                     RAEPEELERNPRARSARLRAAEKIGPG"
     gene            1490..1930
                     /locus_tag="VGA78_09830"
     CDS             1490..1930
                     /locus_tag="VGA78_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894212.1"
                     /translation="MPQAFKQAPWRLQIRATSRTALWIVGLLVLGGLYLAVNAKVARA
                     GRELLVLERQQELLARSNAELNASYAELTAPELMMARAAYLGFRPVKPEEVEYVRVAG
                     VLPDPGFLAPRPPRSDTNRFGMLSPSYTETLGERLTAFLKGLGE"
     gene            1927..>2906
                     /locus_tag="VGA78_09835"
     CDS             1927..>2906
                     /locus_tag="VGA78_09835"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894213.1"
                     /translation="MKRIPGFRPRGPRTAGSNLPDGPLGASGKIAAASFRGTGEMGGD
                     PPAAVSSGRIRMVMFGLALLSAGLLVQLVRVQFGPYAPVFAARKDVGVTRLERVVPAR
                     GLIFDRNGRLLAGNTTSYVIEIETRQLTPASRLSIAEVLSKTLVLPLEQLYAQLSVDW
                     VARGQYRIRLTRTDAAGQPLPITVDKFVASALNGFLADPLAPDLSGLALVPAPTRVYP
                     AGSLAGHVLGFVNQEGQGFFGVEGYYDEWLAGKPITIARPMIAPEARLQPDPPAGVNL
                     VLTIDTDIQQMVELELAKAIEDSGAEHGEILVMDPSNGEILAMASWPILDP"
BASE COUNT          465 a          965 c          992 g          484 t
ORIGIN      
        1 atatactgtg ggggcttgtg gggggtagtg ggggggtgtg ggacgccgcc ttagccggcg
       61 tcccatcctt tctaaactac caccgaacga atgttcttag gccaattcaa gtataccacc
      121 gacaccaaag gtcggctaac gatccccgtt cgctttcggg ccgcgctcgc ttccggcgcg
      181 tacctcatcc agggattcga acgcaacctc atcgtccaca cctccgaaaa cttccacggg
      241 atcgccaaga aggcctccgc cctcagctcc actcaaccgg gggcccgcgc cgtccggcgg
      301 gtgatcttcg gcggagcgac cgaggtcgcc ctcgactcag ccggccgaat caatatcccg
      361 cccttcctgc gcgactatgc cggcctcgac ggggaggtgt acctggtggg ggtcggggag
      421 tccttcgaga tctggcgggc cgaggagtgg gaaaaacaat tggcgtcggt gaccgatccg
      481 gaggcgaacg cccagcggtt cgccgatttc gagctgtaaa cggggcaggc ggtggatcgg
      541 cgttcgcccg agccgcacac cccggttctt taccaacaag tgctcagcgc cctcgacccg
      601 cagcccgggt gcttaatgat cgacggcacc atcggagcgg gaggccatgc cgaggggatt
      661 ctggagcgct ccgcgccgtc cgggcagctg ttgggccttg accgggatcc ggtcgcactg
      721 ccgctggccc ttcagcgcct ggaacggttc ggagcccgcc tccagcttcg gcagggttcg
      781 tttcgagacc tgagcgccca cgccgcggcg gtcggctggc aggcggtgga cggaatcctg
      841 ctcgacctgg ggctgtcctc catgcagctg gccgacccgc gccgggggtt ctcgttccag
      901 tcggagggcc ggctggacat gcgcttcgac ccggggcagg agctggaggc ggccgagctg
      961 gtcaatcggc tgcccgagcc ggagctggcg agcgtgattg ctcggtacgg cgaggacccg
     1021 cgggcccggc gaatcgcccg ggcgatcgtg gcggcccggc cgctgcagac caccacgcag
     1081 ttggccgagg tggtcgcttg ggcggtccgc agccggggca gccggaccca tccggccacc
     1141 cgcacgttcc aggcgctgcg catcgcggtc aacgaggagt tgaccgccct ggaggaagcg
     1201 cttccgcaga cggtcgagct gctgaagccg ggtgggcggt tggtagttct cgcgtttcat
     1261 tcgctggaag accggctggt gaagcggttc tgccgggaag ccagcctcag tactgaagaa
     1321 cgaccggccc ggctgcggcg gatcacccgc aagccggttc gagcggagcc ggaggagcta
     1381 gaacggaacc cgcgggctcg cagcgcacgg ttgcgggcgg ccgagaagat cggcccaggc
     1441 tgagggttcc agggtggcat gaagcttgca gaacgttatt gggaaaacca tgccccaggc
     1501 cttcaaacaa gccccatggc ggctccagat tcgcgccacg agccggacgg cgctctggat
     1561 cgtggggctg cttgtgttgg gcggcctcta cctggcggtc aacgccaaag tggcccgcgc
     1621 cggacgggag cttctggtgc ttgagcggca gcaggaacta ctagcgcgtt ccaacgccga
     1681 gttgaacgcc agctacgccg aactgaccgc acctgagctg atgatggccc gggccgccta
     1741 tctggggttt cgccccgtca agcccgagga agtggaatac gtccgggtcg cgggggttct
     1801 gcccgacccg ggttttctcg ctccccggcc gccgcgctcg gacaccaatc gcttcggcat
     1861 gctgtccccc agctacaccg aaaccctggg cgagcggctg actgccttcc ttaaaggatt
     1921 gggcgagtga agcggattcc cgggttcagg ccgcgtggcc cacgcaccgc gggctccaac
     1981 ctgcccgatg gcccgctggg cgccagcggc aaaatcgcgg cggcctcctt ccgtgggacc
     2041 ggcgagatgg gcggcgatcc gcccgccgcg gtctcctccg gccggattcg gatggtgatg
     2101 tttggattgg cgctgctcag cgccggactg ctggtccaat tggttcgggt gcagttcggc
     2161 ccctacgcac cggtgttcgc cgcccgcaaa gacgtagggg tcacccggct cgagcgagta
     2221 gtccccgccc gcggcctgat cttcgatcgc aacggccgcc tgttggcggg caacaccacc
     2281 tcctacgtga tcgagatcga aacccgccag ttgactccgg ccagccgcct gtccatcgcc
     2341 gaggtgctct ccaagaccct ggtgctgccg ctcgagcagc tctatgccca actgagcgtg
     2401 gattgggtcg cccgcggcca gtatcgcatc cgactgaccc ggaccgatgc ggccggccag
     2461 ccattgccga tcacggtcga caagttcgtc gccagcgccc tcaatggatt cctggccgat
     2521 ccgctcgcgc ccgacctgag cgggctggca ttggtgccgg cgccgacccg ggtatacccg
     2581 gccggcagcc tggctggaca cgtgctggga ttcgtcaacc aggaaggcca gggcttcttc
     2641 ggggtcgagg ggtactacga tgaatggctg gcgggcaaac cgatcacgat cgcccgcccg
     2701 atgattgccc cggaggcccg gctgcagccc gacccgcccg ccggggtcaa cttggtgctc
     2761 acgatcgata ccgacattca gcagatggtc gagctggagt tggccaaggc gatcgaagac
     2821 tcgggggccg agcacggcga gattctggtc atggatccca gcaacggcga gatcctggcc
     2881 atggcctcct ggccgattct ggatcc
//
LOCUS       DASWKS010000343        11107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_168563, whole genome shotgun sequence.
ACCESSION   DASWKS010000343 DASWKS010000000
VERSION     DASWKS010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168563"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..544)
                     /locus_tag="VGA78_09840"
     CDS             complement(119..544)
                     /locus_tag="VGA78_09840"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9894214.1"
                     /translation="MSEDSEGLGAVEGHDGIFTIRSGGNVRGWNGIRYKAGLSARNVK
                     AKQLSMNVATIPPGGVAYAHIHVDFEVMLYILEGRVRHEFGPRLEHVLENQAGDFIFI
                     ESGVPHEVFNLSQTEPVVAVVARSDASEWEHIIPFERPT"
     gene            complement(541..1665)
                     /locus_tag="VGA78_09845"
     CDS             complement(541..1665)
                     /locus_tag="VGA78_09845"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX9894215.1"
                     /translation="MTLAQTPESPSAPAISPSAPINLADVEARARTVLPRAAADYFAG
                     GAEDEVSLRANRAVFESIALRPRYLVDVSRRSLTTRVLGTDLALPVLLAPTGFQKLAH
                     ADGELATARAAAEAGTIMVLSTFSTVSLEEVQRATPAPKWFQLYVHKDRGLTRNLVDR
                     AHSAGYTALVLTVDVPVLGRRERDLRNGFVLPPELRVANFDMSQSESLHDAGEESGLA
                     QFHRGLREPSFGLKDVDWLATLSPLPILLKGVLRGDDARAALDHGVSGILVSNHGGRQ
                     LDGAISGIRALPDVVEQVGGRCEVLVDGGVRRGTDIVKALALGARAVLIGRPMVWGLA
                     WNGASGVVEVLRILAEELDTAMALCGACSPVQLTSDLVAR"
     gene            complement(1662..2843)
                     /locus_tag="VGA78_09850"
     CDS             complement(1662..2843)
                     /locus_tag="VGA78_09850"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9894216.1"
                     /translation="MRHIEIPALGLAAVLAIGIVELRAQAPPSASPSVRQAVYVPPPG
                     DDWARRRPAEVNFDSLRLAEAVTFAESNPIPWLKDIGAQLKRTTAREPYPAIQGPYKD
                     WEAPSGVVIRHGYIIAEWGDTRRVDLTFSVAKSYLSAVAGLAFDRGLIPDLHRPVAEL
                     VQDGGFESEHNRKITWHHFLTQTSEWEGTLWGKPDVADRREGYDRKLREPGSFWEYND
                     VRVNRTALALLRVWRRPLPEVLTEYIMNPIGASDTWRWYGYYNSYTEQDGKVVQSVSG
                     GTHWGGGFWASTRDHARFGLLLSRRGTWGDRQLLSEKWIALATTPTPIRPAYGYLWWL
                     NTDRQRYPNASARSFFALGAGGNMIWIDPALDLVVVVRWLDPSQTNQFIGKVVAAFAG
                     P"
     gene            complement(2900..4363)
                     /locus_tag="VGA78_09855"
     CDS             complement(2900..4363)
                     /locus_tag="VGA78_09855"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9894217.1"
                     /translation="MRLLIPAVLVLIPLPAPGSLLPPPVSPLPNDQLKKEAVSLVDKQ
                     MSEMTRLSDQVWRFAETALRETQSAALLADHAEKQGFRVSRGVAGMPTGFIAEYGQGR
                     PIIGIMGEYDALPGISNKAEPAKVPLLAGAPGHGCGHNLFGVASLGAATAIKELIAAG
                     KLKGTVRFYGTPAEESVGGKVYMARDGLFKDVDVMLAWHPADRTRADATSTQAIIDFI
                     VEFRGKTAHAAFDPWNARSASDGLEAFLHGVNLLREHVRPTVRMHYVVQHAGNVPNVV
                     SDYAKVWMWVRDSKSDGAEAVLERVKTIAQGAALIAGVESELKVQAGDYEILVNQAGT
                     LLLDRNLRWLGPISYTVQEQEFAKAIQRATGKPEKGADGAVQPLEPFGKEPEGGSTDV
                     GDVSWLVPTLHFSVATAPLETPWHAWPVVASSGMSIGHKGMMLAAKNLAITAIDLFQD
                     AKLRDQIRAEFTEQTKGFVYKPYIPPGPPPVPGGRTD"
     gene            4570..6474
                     /locus_tag="VGA78_09860"
     CDS             4570..6474
                     /locus_tag="VGA78_09860"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX9894218.1"
                     /translation="MRRVPHRFPTRLDGSDLRTGQLAWWYGLSFLILLLLPVQLRLGG
                     PFWALPVIQEVQVWVWGASFLALAVVIGTVGSRPGGIALGAALIAAAGCFGAAYGFLL
                     FRSEVQHSRWIAVLSAFTGFILAVLPFVLRRRLAQGTIALGVGAVVVGLIGVRSANRR
                     NAGPETVSINTVLYPVSLTYHPHLVDTNETEGGAIEPLGQGFLLVTGEGEFYHLEWEQ
                     GDSLLRSRRLPFTAPFDRAEFLADPESIRSQMKVRVTDLALDTATASPRMYLAHQYWN
                     SKDRCFTLRVSVAALPEPTGRVAAPPEWETVFETRPCLPLAPTFEDSESGGELAWDKG
                     GALLIAVGDHGFNGLTEAALAQEPDTDYGKVLRLDLAGGREVVSLGHRNPQGLVVDHE
                     GRVWITEHGPQGGDEINLVEQGGNYGWPLATYGTQYGVAYWPLAKGKRDHGPFVEPVI
                     AFVPSVAIASIIEVGARRFPDWQGDFLAGSLRAMTLYRIRTRNGRVSYVETIAVRRRI
                     RDLTQGSDGRIVLWTDQGDIVVLALVAGRPDGQLVYGRCSGCHGANLEGSGLGPPLRG
                     IVGRRVASREDFSYSPGLSRRGGLWTVARLDTFLLNPEGFASGTRMKFPGIPDERERR
                     ELIEFLRGKR"
     gene            6552..8870
                     /locus_tag="VGA78_09865"
     CDS             6552..8870
                     /locus_tag="VGA78_09865"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894219.1"
                     /translation="MRQVPLEPGTRVGPYTILAPLGAGGMGEVFRARDTRLGREVALK
                     ILPFEFSFDPERLRRFELEARAASALNHPNLLTIYDVGTHEDLPYLVCELLSGRTLRQ
                     VLQTGPVPLASLMSWGRDLVSGLAAAHAKGIVHRDLKPENIFVTEDGRVKILDFGLAK
                     LRPPGGEQASAEPHAASTDTGMVLGTMGYMSPEQARGERLDHRTDIFSLGAVLYEMAT
                     GRAAFPGQSLASLVAVLNEEPPPVSSIQHGFPPALEAVIARCLAKVPEDRFQSAPELS
                     RALDSPVAGGKHGSGSRRWTVALVALVALLAGAALVVLATRGRKAVLDNRTVAVEPFV
                     NTSGDSTQNFLADGVTDGLAVALSQIGSLKVVALQDSASLGDLRRLHGVRAVVRGSVS
                     RSGDTVRVEARLLDAGSRGTLWEDQVAAPLGKLPQHHGSMAVAISRALRAELRRDERA
                     RLATAGEIDRVAYEAFLRGRFALEQGELELARGQFERAATIAPAWAPPHVGLANYWTS
                     LSFFSDLPPADVLPRARDEVTRALELDQTLAEAHAVLGYLRAYYEWDWRAAEVEYRRA
                     LALQPSNSQAYFSYSRFLASRGRLDQAIEQIRKAVEFDPLSLELKANVALLHYFAGHY
                     DSAAAGLEEIRRVNPNYVLGGWALGLVYEQQGRAREAVALLEAVAGRSLNRLSSLGHS
                     YGLVGRRGEARAILDTLRVRARSTYVPAYWFALVHAGLGDTAATLESLERAYQERSTV
                     LAYLRIDPRLGLVRDQPRFIALARRVAGDTTP"
     gene            8934..10970
                     /locus_tag="VGA78_09870"
     CDS             8934..10970
                     /locus_tag="VGA78_09870"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9894220.1"
                     /translation="MLLFSFLLLAVPQSQDTLLTVARYLDLEDVSDPRISPDGRTIVY
                     SRRWVDKVNDKWESAIWVMDADGSRSRFLVKGGAPVWSPDGSRIAYVAAAEEPKGAQI
                     FVRWMDAEGATTQVTRVAEGPGNVKWSPDGKWIGFTMLVPKSDDWAIEMPPPPTGANW
                     TPPPKVVNRLHYRMDRAGLTRTGYTHLFVVPAEGGTPRQVTSGDWSVGAPFDGLLLLV
                     GWDWMPDGKSIVVEALNDPEADYTYRASSIYSVNLATGAQKRLTADPGYWMTPVVSPD
                     GSKIAFTGHPPTKHTYQAMDLYVMNADGSAVRNISAGMDRDPAFFGFGGLFWAPDGSG
                     LYISPENQGSRNPVFMPVDGSGAKPVTTGSQVIMLSGISKSGVLSGTRSTFTAPNDVV
                     RITRNRQGADVAQLTEVNADLLAGKRLAQAEEIWYTSSGGAKIQGWIVKPTAFDPAKK
                     YPFLLEIHGGPHGMYSVGFDYMWQTWAANGYVVLYTNPRGSTGYGSAFGNAIDQAYPS
                     VDYDDLMAGVDTVLGRGYVDATRMYVAGCSGGGVLSSWVIGHTTRFAGAAVRCPVTNW
                     LSMAGHTDVPLFTHNFFAAPFWEKPEQWLKQSPLMYVGNVKTPTLIMTGNLDLRTPMP
                     QSEEYYAALKLRRVPTTLLRFENEWHGTESMPSNWMRTQLYMMSWFRKYPGETP"
BASE COUNT         1787 a         3658 c         3730 g         1932 t
ORIGIN      
        1 ccggagcgac ggcggcgaag acgaaactca aacccgcgat gtagcaggtc gggcgaagga
       61 aagacgggga gcgcatggcc tacctcaggg acagagcggg gacagcagta atcgggggtc
      121 aggtcgggcg ttcaaacgga atgatgtgtt cccattcgct ggcgtccgac cgcgccacca
      181 ccgccaccac cggctcggtc tggctcaggt tgaacacctc gtgcggcacc ccggactcga
      241 tgaagataaa gtcgccggcc tggttctcca gcacgtgttc cagcctgggc ccgaactcgt
      301 gccgtacccg cccttcgagg atgtagagca tcacctcgaa gtcgacatga atgtgggcgt
      361 acgccacgcc gccgggcgga atggtcgcca cgttcatcga gagctgcttc gccttcacat
      421 tcctggccga gaggcccgcc ttgtaccgga taccattcca gcctcgcaca ttcccgccgc
      481 tccggatggt gaagatgcca tcgtggcctt cgaccgcacc caagccttcg ctgtcttcac
      541 tcatcgcgcc accagatccg aggtgagctg caccggactg caggccccgc acagcgccat
      601 ggccgtgtcc agctcctcgg ccagaatccg aagcacctcc accaccccgc tggcaccgtt
      661 ccacgccaat ccccagacca tcggccggcc gatcagcacg gccctggcgc ccagcgccaa
      721 tgccttcaca atgtcggtgc cccggcgcac cccgccgtcc accagcacct cgcatcggcc
      781 accgacctgc tccaccacgt cgggcaacgc ccgaatgccg gagatggctc cgtcgagctg
      841 acgacccccg tgattggaca cgaggatacc gctgacgccg tgatccagcg cggcccgggc
      901 gtcgtcgccc cgcagtacgc ccttgagcag gatcggcagc ggcgagagcg ttgccagcca
      961 gtccacatcc ttgagaccga aggacggctc cctgagcccc cggtgaaact gggccagccc
     1021 ggactcctcc cccgcatcat ggagcgactc gctctggctc atgtcgaagt tggctacccg
     1081 cagctccggt gggaggacga agccgttcct caggtcccgc tcgcgccggc ccagcaccgg
     1141 cacatccacc gtgagcacca gcgccgtgta gccggccgag tgggcccgat ctaccaggtt
     1201 ccgggtcagc ccccggtcct tatgcacgta gagctggaac cacttgggag ccggcgtggc
     1261 gcgttgcacc tcctccagcg agacggtgga gaaggtgctc aggaccatga tggtgccggc
     1321 ctcggccgcc gcccgcgcgg tggcgagctc gccgtcggcg tgggccagct tctggaagcc
     1381 ggtcggcgcc agcaacaccg gcaaggcgag atcggtgcct aacaccctgg tggtcaggct
     1441 ccgccgactc acatcgacca ggtagcgggg ccggagcgcg atcgattcga agaccgcccg
     1501 gttggcccgc aaactcactt catcctcggc ccccccggcg aagtaatcgg cggctgcacg
     1561 gggcaagacc gtcctggccc gcgcctcgac gtcggccagg ttgatcggcg cggacggcga
     1621 tatggccggg gcactggggc tttccggggt ctgggcgagg gtcatgggcc cgcgaacgcg
     1681 gcgaccacct ttccgatgaa ctggttggtc tgggaggggt cgagccagcg caccacgacc
     1741 accaggtcca gggccgggtc gatccagatc atgttgccgc cggcgccgag ggcgaagaag
     1801 ctccgggctg aggcattggg gtaccgttgc cggtcggtgt tgagccacca gagatatccg
     1861 taggccggcc ggatcggggt gggagtcgtc gcgagagcga tccacttctc cgacaggagt
     1921 tgtcggtcgc cccacgtccc gcggcgcgaa agcagcaggc cgaaacgggc gtggtcacgg
     1981 gtactggccc agaacccgcc gccccagtgg gtgccgccgc tcaccgactg caccaccttg
     2041 ccgtcctgct cggtgtagga gttgtaataa ccgtaccagc gccaggtgtc gctcgccccg
     2101 atcggattca tgatgtattc ggtgagaacc tcgggcaggg gccgccgcca gacccggagc
     2161 agcgcgagcg cggtccggtt cacccgtacg tcgttgtatt cccagaagct gcccggctcc
     2221 cgcagcttgc ggtcgtatcc ttcgcgccgg tcggccacat ccggcttccc ccagagggtg
     2281 ccttcccact cgctggtctg ggtcaggaag tgatgccagg tgatcttccg gttgtgctcg
     2341 ctctcgaagc cgccgtcctg caccagctca gccaccgggc ggtgcagatc gggaatgaga
     2401 ccgcgatcga acgcgagccc cgcgacggct gagaggtagc tcttggcgac gctgaaggtg
     2461 agatccaccc gccgggtgtc gccccactcc gcgatgatgt agccgtgccg gataacgacc
     2521 ccgctgggtg cttcccagtc tttgtaaggg ccttggatgg cggggtaggg ctcgcgcgcg
     2581 gtggttcgct tgagctgcgc gccgatgtcc ttgagccagg gaatggggtt gctctctgcg
     2641 aacgtcaccg cctcggccag gcggagggag tcgaagttca cctccgccgg acgcctgcgg
     2701 gcccagtcgt cgccgggtgg tgggacatag acggcttgac ggacggacgg actggcggac
     2761 ggtggtgcct gggcacggag ctcgacgatg ccgatcgcca ggaccgccgc gagcccaagt
     2821 gctggtattt cgatatggcg catgatctcc gccagtcctc cagtccgtcc gcccgcccgt
     2881 ccgcccgtcc gtcagtccgt cagtccgtcc gcccgccggg aaccggaggc ggcccgggcg
     2941 gaatgtacgg cttatacacg aaccccttgg tctgttccgt aaactcggcc cggatctgat
     3001 cccggagttt cgcatcctgg aacagatcga tagcggtaat cgcaaggttc ttcgcggcca
     3061 gcatcatgcc cttgtggccg atcgacatgc cgctcgaggc gaccacgggc caggcatgcc
     3121 agggagtctc gagtggcgcg gtcgccaccg agaagtgcag ggtcggtacc agccagctca
     3181 cgtcccccac gtcggtcgac ccgccttcgg gctccttgcc gaacggctcc agcggctgca
     3241 ccgcgccgtc cgcgcccttc tcgggcttgc cggtggcccg ctggatggcc ttggcgaact
     3301 cctgctcctg cacggtgtag ctgatggggc cgagccagcg gagattccgg tccagcagga
     3361 gcgtgccggc ctggttgacc aggatctcgt agtcacccgc ctggaccttg agctccgatt
     3421 ccacgcccgc gatcagtgcc gctccctggg cgatggtctt gacccgctcc agcaccgcct
     3481 cggcgccgtc gctcttggag tcgcgcaccc acatccagac cttggcgtaa tcggatacca
     3541 cgttaggcac gttaccggcg tgctgcacca cgtagtgcat gcgcaccgtc ggacgcacgt
     3601 gctcccgcaa caggttcaca ccgtgcagga aggcttccag cccgtcggag gcgctgcgcg
     3661 cgttccaggg atcgaaggct gcgtgcgcgg tcttgccgcg gaactcgacg atgaaatcga
     3721 tgatggcctg ggtgctggtc gcgtcggccc gggtccggtc ggccgggtgc catgccagca
     3781 tgacgtcgac gtccttgaag agaccgtccc gcgccatgta caccttgccg cccaccgact
     3841 cttcggcggg cgtgccatag aagcggaccg tgcctttgag cttgccggct gcgatcagct
     3901 ccttgatggc ggtggccgcg cccaggctcg ccaccccgaa cagattgtgg ccgcagccgt
     3961 gtcccggcgc gcccgccagc agcggaacct tcgccggctc ggccttgttg gagatccccg
     4021 gcagggcgtc gtactcgccc atgatcccga tgatgggccg gccctgaccg tactcggcga
     4081 tgaacccggt gggcatgccg gccactcctc gactcacgcg aaagccctgc ttctcggcat
     4141 gatcggccag cagcgcagcc gattgggtct cgcgcaacgc ggtctcggcg aaccgccaca
     4201 cctggtcgga gagccgagtc atctcggaca tctgtttgtc gaccagggaa accgcctcct
     4261 tcttcaactg atcattcggg aggggggaga cgggaggcgg gagcagggag ccgggagcag
     4321 ggagcgggat gagaaccagc actgccggga tcaggagccg catttcatgc ccttcctcgg
     4381 ttggtctgct ggcctccagc tgccaacaaa cggatcagat ccgcgattgg tctgagttaa
     4441 cttattgcta ttacggtatt tgttgcatcg tgccaagaga taaactggca tcgcctggtc
     4501 ctcgctggta ccggcgatgc gatggattat ggcccggatc gccgcgcgcg caacctccag
     4561 gggaacgaca tgagacgagt tccacaccgg tttcctaccc gactcgatgg gagcgacctc
     4621 cggacgggtc agctggcgtg gtggtacggc ctctcgttcc tgatcctgtt gctgctcccg
     4681 gtgcagttgc ggctgggagg acccttctgg gcgctgccgg tgatccagga ggtgcaggta
     4741 tgggtctggg gtgcgtcctt tctcgcgctg gccgtggtga tcggaacggt cggctctcgt
     4801 ccgggcggga tcgccctggg cgcggcgctt atcgcggcgg ctgggtgctt tggcgcggca
     4861 tacgggtttc tgctgttccg ctcggaggtg cagcattccc gctggatcgc cgtgctctcg
     4921 gcgttcaccg gattcatcct ggcggttctt cccttcgtgc tccgccggcg cctggcgcag
     4981 ggcaccatcg cattgggggt gggtgcggtg gtggtgggac tgattggggt gcgatcggcc
     5041 aaccggcgca atgccggtcc ggaaaccgtc tctatcaaca cggtgctcta cccggtctcg
     5101 ctcacctacc acccgcatct ggtcgacacg aacgagaccg agggtggtgc catcgagccg
     5161 ctcggtcagg ggtttctgct ggtcaccggg gagggagagt tctaccacct ggaatgggag
     5221 cagggcgaca gcctgctgcg ctcccggcga ctcccgttca ccgcaccctt cgaccgggcg
     5281 gagttcctgg cggatccaga aagcatccgc tcccagatga aggtccgggt gaccgatctg
     5341 gcgctggaca ccgcgaccgc ttccccccga atgtatctcg cgcatcagta ctggaactcg
     5401 aaagaccgct gtttcactct ccgggtttcc gtggccgcgc ttcctgaacc gacgggccgc
     5461 gtggctgctc cgcccgagtg ggagaccgtg ttcgagaccc ggccctgtct accgctggcg
     5521 cccaccttcg aagacagcga atccggtgga gagctggcgt gggacaaggg aggagccctc
     5581 ctcatagccg ttggcgacca cggattcaac ggcctcacgg aagccgcgct ggcccaggag
     5641 cccgacacgg actatgggaa ggtgttgcgt ctcgatctgg ccggcggccg cgaggtggtg
     5701 agcctgggtc atcggaatcc gcaaggactg gtggtcgatc atgaaggacg ggtgtggatc
     5761 acggagcatg gcccgcaggg aggggatgag atcaacctgg tggagcaggg cggcaattat
     5821 gggtggccgc tggccaccta tggcacccag tacggggtgg cgtattggcc gctcgcgaaa
     5881 gggaagcgag atcatggccc atttgtcgag ccggttatcg ccttcgttcc gtcggtggcg
     5941 atcgcgagca tcatcgaggt cggagctcga cggtttcccg actggcaggg tgacttcctg
     6001 gccgggtctc tgcgggcgat gactctttac cggatcagga cccggaatgg ccgggtgtca
     6061 tacgtcgaga ccatcgccgt tcgacgccgg atcagggacc tgactcaggg cagcgacggg
     6121 agaatcgtgt tgtggacgga ccagggtgat atcgtggtgc tggctctcgt cgccgggcgg
     6181 cccgacggcc agctggtcta tggccgctgc agtgggtgcc acggggccaa cctcgaggga
     6241 tcagggctgg gcccgccctt gcgcggcatc gtcggccgcc gggtcgcttc ccgggaggat
     6301 ttctcctact cgccgggact gagtcgccgg ggggggctgt ggacggtggc ccggctggac
     6361 accttcctcc tgaatccgga gggctttgcc agcgggaccc gcatgaagtt ccccgggatt
     6421 cctgatgagc gcgaacggcg ggaactgatc gagtttctcc ggggcaaacg gtaggtcggt
     6481 cattccgcgg accgttcttg ccaaaccgcg attgacgagg caagctaacc gcattcactc
     6541 aggtgttcgc gatgaggcag gtcccgctcg agcccggcac gagggtgggg ccgtatacga
     6601 ttctcgctcc gctcggcgca gggggcatgg gggaggtgtt tcgcgcccgc gacacccgcc
     6661 tcggccgaga ggtcgccctc aagatcctcc cgttcgagtt ctcctttgat ccggaacggc
     6721 tgcgtcgctt cgagctggaa gcccgggcgg catcggcgct caaccacccc aatcttctca
     6781 cgatttacga cgtcggcacc cacgaggacc tgccgtacct ggtctgcgag cttctctcgg
     6841 gccgcaccct ccggcaggtg ctccagaccg ggcccgtccc actggcgtct ctgatgtcat
     6901 gggggcgtga cctggtcagc ggattggcag ccgcgcacgc caaggggatc gtacaccgcg
     6961 atctcaagcc cgagaacatc ttcgtgaccg aggacgggcg ggtgaagatc ctggatttcg
     7021 gtctcgccaa gctccggccg cccggtggag agcaagcgag tgccgagccg cacgccgcca
     7081 gcaccgatac cgggatggta ctcggaacga tgggatacat gtctccggag caggcccggg
     7141 gcgagcgact ggaccaccgg accgacatct tctctcttgg cgctgtgctg tacgaaatgg
     7201 ctaccggtcg agcggccttt cccggacagt cgcttgcctc gctggttgcc gtgctcaacg
     7261 aggagcctcc ccccgtttcc tccatccaac atggctttcc ccccgccctc gaagccgtca
     7321 tcgcccgatg cctggcgaag gtgccggaag atcggttcca gtccgctccg gagctatccc
     7381 gggcactcga cagtccagtc gctggtggga aacacggcag cgggtccagg cgctggaccg
     7441 tcgccctggt tgccctggtg gccctgctcg ccggcgccgc tctggtcgtg ctggccaccc
     7501 ggggtcgcaa ggccgtcctg gataaccgga ccgtcgccgt ggagccgttc gtgaacacct
     7561 ccggcgactc cacccagaac ttcctcgccg acggtgtgac ggatggtctt gcggtggcct
     7621 tgtcgcaaat cgggtcgctc aaggtggtgg cgcttcagga tagcgcgtcg ctgggagacc
     7681 tgcgccgcct gcatggggtt cgggcagtgg ttcggggatc ggtttcccgt tcaggcgaca
     7741 cggtgcgggt cgaggcccgg ctgctcgatg ccgggagcag gggaacgctc tgggaggacc
     7801 aggtcgcggc ccctctgggg aaactgcccc agcatcatgg ttcgatggcg gtcgcgattt
     7861 ccagggccct tcgcgccgag ctgcgtcgcg acgagcgagc caggttggcg acggccggcg
     7921 agatcgatcg agtcgcgtac gaggcgtttc tgcgcggccg gttcgcgctg gagcagggtg
     7981 agctcgagct ggcccgcggc cagttcgagc gcgcggcgac tatcgctccc gcatgggctc
     8041 caccccacgt ggggctggcc aactactgga ccagcctgtc gttcttctcc gacctgccac
     8101 ccgcggacgt cttgccacgc gcacgggacg aagtcacccg ggcgctggag ctcgaccaga
     8161 ctctggcgga agcccacgcc gtactcggct atctccgcgc ctattacgag tgggattggc
     8221 gcgccgcgga ggtcgaatat cgacgcgctc tcgcgctcca gccgagcaac tcgcaggctt
     8281 acttctccta tagcaggttc ctggcttccc gggggcggct cgaccaggcg atcgagcaga
     8341 ttcgcaaggc ggtcgagttc gatccgctct cgctggaact caaggccaac gtcgcgctgc
     8401 tgcactactt cgcgggccat tacgactcgg ccgcggccgg cctggaggag atcaggcggg
     8461 tcaatcccaa ttacgtcctg ggcgggtggg ccctcggcct ggtgtacgag cagcaaggaa
     8521 gggctcgcga ggcggtcgct ctcctggaag cggtcgcagg gcgcagcctg aatcgactat
     8581 cctccctcgg ccactcttat gggctggtcg ggcgtcgggg agaagcgcgt gccattctgg
     8641 acacgctgcg ggtccgagcg cggagcacct atgttccagc ctactggttc gcgctggtac
     8701 atgccgggct gggcgacacg gctgcgacgc tggaatcgct cgagagggcc taccaggagc
     8761 ggtccaccgt tctggcttac ctccggatcg atccgcggct cggcctggtg cgcgaccagc
     8821 ctcggttcat cgccctggca cgtcgcgtgg cgggcgacac cacgccctga gcagatctgg
     8881 cggtaccttt tcgtgactca cggttcgtga ttcgcgacga ctctggaggc tccatgctgc
     8941 tgttttcgtt tctgttgctc gcggttcctc agtcccagga taccctcctc accgtcgcga
     9001 gatatctgga cctcgaggac gtgtccgatc ccaggatctc ccccgacggc cgcaccatcg
     9061 tctacagccg gcgctgggtc gacaaggtga acgacaagtg ggagtcggcc atctgggtga
     9121 tggatgccga tggatcgaga agccgattcc tggtgaaggg cggggcaccg gtgtggtcgc
     9181 ccgacggctc gcgcatcgcc tacgtggctg ccgccgagga gccgaaaggg gcccagatct
     9241 tcgtgcggtg gatggacgca gaaggcgcca ccacccaggt cacccgggtg gcggaagggc
     9301 cgggcaacgt gaaatggtcg cccgacggga agtggatcgg cttcaccatg ctggtgccca
     9361 agtcggacga ctgggcgatc gagatgccgc ccccgccgac cggcgccaac tggacgcctc
     9421 cgcccaaggt ggtgaaccgg ctgcactacc ggatggaccg ggccggtctc acccgcaccg
     9481 gatacaccca tctgttcgtg gtcccggccg agggcgggac gccccggcag gtcacctcgg
     9541 gtgactggag cgtgggcgca ccgttcgatg ggctgctgct gctggtggga tgggattgga
     9601 tgcccgatgg caagagcatc gtggtcgaag ccctcaacga tccggaggcg gactacacct
     9661 atcgggcctc cagtatctat tcggtgaacc tcgcgaccgg cgcgcagaag cgcctcaccg
     9721 ccgatcccgg ctactggatg actcccgtgg tatcgcccga cgggtcgaag atcgccttca
     9781 cgggccaccc accgaccaaa cacacctacc aggcgatgga tctgtacgtc atgaacgcgg
     9841 acggcagcgc ggtccgcaac atcagtgcgg gaatggaccg ggacccggcg ttcttcgggt
     9901 tcggcggtct gttctgggct ccggacggga gcggactcta catctcgccc gagaatcagg
     9961 gcagccggaa cccggtgttc atgccggtgg atggctcggg cgccaagccg gtgacgaccg
    10021 gctcgcaagt gatcatgctg agcgggatct ccaagtcggg agtcctcagc ggtacccgca
    10081 gcaccttcac cgctccgaac gatgtggtgc ggatcacccg taaccgccag ggcgccgacg
    10141 tggcgcagct caccgaggtg aacgccgacc tactggccgg gaagcgactg gcgcaggccg
    10201 aggagatctg gtacacctcg agcggcggcg cgaaaatcca gggatggatc gtcaagccca
    10261 cggcgttcga tcccgccaag aagtacccct tcctgctgga gattcacggc gggccgcatg
    10321 ggatgtactc ggtggggttc gattacatgt ggcagacctg ggccgccaac ggctacgtcg
    10381 tgttatatac gaatccgcgg ggcagcaccg gatacggctc ggccttcggg aacgcaatcg
    10441 accaggccta ccccagcgtc gactacgacg acctgatggc gggggtggac accgtactgg
    10501 ggcgcgggta tgtcgatgcc acgcggatgt acgtggcggg gtgctccggg ggcggcgtac
    10561 tgtcgagctg ggtgatcggg cacaccaccc ggttcgccgg cgcggcggtg cggtgtccgg
    10621 tgaccaactg gctcagcatg gcgggccaca ccgatgtgcc gctcttcacc cacaactttt
    10681 tcgcggcacc gttctgggag aagccggagc agtggctcaa gcagtcgccc ctgatgtacg
    10741 tgggcaacgt aaaaaccccc acgctgatca tgaccgggaa tctcgacctt cgcactccga
    10801 tgccgcagag cgaggagtac tacgccgcgc tcaagctgcg ccgcgtgccg accacgctgc
    10861 tgcggttcga gaacgagtgg cacgggaccg agtcgatgcc gtcgaactgg atgcggaccc
    10921 agctgtacat gatgagctgg ttccgaaagt accccggcga gacgccctga cctgcaggac
    10981 tagggacttt gggctcagga ccaaggagta gggtctcagt cccggttccg atgctgcggc
    11041 gagaatttct cgaactgacg ggctctgccc tggtcgctcc ggcactgcag caaaccgcgc
    11101 agctgcc
//
LOCUS       DASWKS010000344         2989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2040567, whole genome shotgun sequence.
ACCESSION   DASWKS010000344 DASWKS010000000
VERSION     DASWKS010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040567"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1104)
                     /locus_tag="VGA78_09875"
     CDS             complement(94..1104)
                     /locus_tag="VGA78_09875"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894221.1"
                     /translation="MARRIFQAVFVLLGLSMLIFVIARVMPGDPARTALGARAPQWVV
                     DRLREDMHLNDPLPVQYYFWLRDALQGDFGISLFTRREVADDVKEFLPASVELVLVAG
                     LITAVGGIGLGTLSARYKDTWIDNLVRVISYAGVVTPAFVFAILFLLLFGLELGWLPA
                     IGRLSEGIIAPPRLTGLMTVDSLLAGRPDAFWDALKHLIMPAAALAMGSLSQEARITR
                     STMADNLNKDYIAAERALGIPDRIVMGRFLLKPSLIPTVSIFGLDFAASFSNAFLVEL
                     IFNWAGLSRYGMNAMLRKDLNAISAVILILGVLFITVNILVDLIVGALDPRIRLRAAT
                     SE"
     gene            complement(1241..2983)
                     /locus_tag="VGA78_09880"
     CDS             complement(1241..2983)
                     /locus_tag="VGA78_09880"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9894222.1"
                     /translation="MVHRKTNRASRLKERWFDQRQLEEKMKKSLPILLIFALLGVACA
                     RTPVEEVPPAGEVAPPVEEAAPPEVAAPPEAVERNLRVSFAWPLYIDPAVGSDYVGST
                     ALANLYDALVFPNAAAGTDPWLATSWDVSPDGLTYTFTLREGAKFHDGSELLASDVVY
                     SYERLQTVGEGYAYLVSGVSEITAPDDSTVVFTLERPSGLFVPSLIRLYILNEDLVRQ
                     NTLAEGPYGAEGDYGKNWLLTHDAGSGPYTIVDFPLEEFALMEKFDDWWNAEMFAENA
                     PTSVKFIGTTEAATVRTLMETGELEITDQWQSVEAFQALDQIEGVDITSFPTMSSFYY
                     MMNNRTPPLDDVHCRRAMSYAFDYQAAVGLEWPGTQVMDGPVPAVLGGHDPNVFTFTR
                     DLDKAADELAQCAYAANIADYPVTVAWVTEVPGEEKFALLFQANMAEIGIPVEVQPTP
                     WLSMVENTSSQETAPHIATIYVSAALPEAGLMLKDRYHSSTSGTWQQNEWLLDAELDA
                     AIDDALATVDPAERFVKYGELEALIMELAPSLFLYDQREQHAVVDYIDWSPEANSAVM
                     GYQFFLPLVGVNTN"
BASE COUNT          615 a          914 c          912 g          548 t
ORIGIN      
        1 gttatccagc cggtttttac gctctaactc gcgcacccgg gaacgggtga gggtcggggc
       61 gaactcgcgg gcttcagctt gatgggtcaa gggctactca ctcgtcgcgg cccgcaggcg
      121 gatgcggggg tccaacgccc ccacaatcag gtccaccaaa atgttgacgg tgataaatag
      181 cacgcccagg atgaggatga cggccgatat ggcattcaga tccttgcgca gcatggcgtt
      241 cataccgtag cgtgaaaggc ccgcccagtt gaaaatgagc tcaaccagga aggcattgct
      301 gaaactggcg gcgaagtcga gtccgaaaat tgagaccgtc ggaatgaggg aaggcttgag
      361 caggaagcgc cccatcacaa tccgatccgg gatgcccagg gcccgctcgg cagcgatata
      421 gtccttgttc aggttgtccg ccatggtcga gcgggtaatc cgggcctctt gtgaaaggga
      481 tcccatggcc agcgccgcgg cgggcatgat caagtgtttc aaggcatccc agaaggcatc
      541 cggccgcccg gccaacaatg aatcgacagt catcaagccg gtcaggcgag gcggcgcgat
      601 gattccttcc gacaaccggc cgatggccgg cagccagcca agttcgagac caaagagcag
      661 taagaagagg atggcgaaca caaaggccgg cgtgacgacg ccagcatagg agatcacccg
      721 caccaggttg tcgatccagg tgtctttgta acgggctgaa agggtcccga ggccgattcc
      781 acccacggcc gtgatcagcc cggctaccag gactaactcg accgaagccg gaaggaactc
      841 tttgacatca tcggccactt cccggcgggt gaacagcgat attccgaaat ccccctgcag
      901 cgcgtcccgc agccaaaagt aatactgaac cggcaagggg tcgttgaggt gcatgtcctc
      961 ccgcagccga tcgacgaccc actgcggggc gcgggcgccg agcgccgtcc gggcggggtc
     1021 gccgggcatc acccgagcta tgacgaagat aagcatcgag aggcccaaca agacgaagac
     1081 cgcctggaag attcggcggg ccaagaaact aagcagacgc accggacacc ccgttaaaac
     1141 tcattgagac ggatggctta ttttggaggg agccccaggt tgatccagtt ctcccccctg
     1201 gggctcctca ttcgttcctc ctggcttatg agccaggatc ttagttggtg ttcacaccga
     1261 cgagcggcag gaagaactga tagcccatca cagcgctatt cgcctccgga ctccagtcga
     1321 tgtaatccac caccgcgtgc tgttcgcgct ggtcgtagag gaagagggaa ggcgccagtt
     1381 ccatgatcag cgcctcgagc tctccgtact tcacaaatcg ctctgccgga tcgaccgtcg
     1441 ccagtgcatc gtcgatggcg gcgtcgagct cagcgtcgag cagccactca ttctgctgcc
     1501 aggttccgga cgtgcttgag tggtagcggt ccttgagcat gagccccgcc tccggaagcg
     1561 cagccgacac atagattgta gcgatgtgcg gagcagtctc ctgggaggaa gtgttttcca
     1621 ccatgctcag ccagggcgtc ggctggacct cgaccgggat gccgatctcg gccatattgg
     1681 cctggaacag caacgcgaac ttctcctcgc ccggcacttc cgtcacccag gcgaccgtca
     1741 ccgggtagtc ggcgatgttg gcggcataag cgcactgcgc caattcatcg gctgccttgt
     1801 ccaggtcacg ggtgaaggtg aagacgttcg ggtcgtgtcc acccagtacc gcaggcaccg
     1861 gcccgtccat cacctgggtg cccggccatt ccaggcccac ggccgcctgg taatcgaagg
     1921 catacgacat cgcccggcgg cagtgcacgt cgtccagcgg tggcgtgcgg ttattcatca
     1981 tgtagtagaa ggacgacatt gtcgggaagc tcgtgatgtc cactccttcg atctggtcga
     2041 gggcttggaa cgcctcgacc gactgccact ggtcggtgat ctccagttcg ccggtctcca
     2101 taagcgtccg aaccgtggcc gcctcagttg taccgatgaa cttcaccgac gtgggtgcat
     2161 tctcggcgaa catctcggca ttccaccagt cgtcgaactt ctccatcaag gcgaactctt
     2221 ccaacgggaa gtcgacgatc gtgtagggcc ccgagcctgc gtcatgagtc agcagccaat
     2281 tcttgccgta gtcgccctcc gctccatagg ggccctcagc gagtgtgttc tggcggacca
     2341 ggtcctcgtt gaggatgtag agccggatca ggctaggcac gaacaagccg ctcggccgct
     2401 ccagggtgaa gacgactgtg gagtcgtccg gtgcagttat ttcgctgaca ccggatacga
     2461 ggtaggcata cccctcgccg acggtctgca agcgctcgta gctgtagact acatcactgg
     2521 cgagcagctc gctgccatcg tggaacttcg ccccttcgcg gagggtgaag gtgtaggtca
     2581 ggccatccgg ggacacgtcc caggatgtcg ccaaccaggg atctgtaccg gccgccgcgt
     2641 tcgggaagac cagcgcgtcg tagagattgg ccaatgccgt ggaaccgacg tagtcgctgc
     2701 cgaccgcggg gtcaatgtac agcggccacg caaaggacac cctcagattt ctttccacag
     2761 cttcaggcgg cgctgcgacc tcagggggcg cggcctcttc gacagggggt gcgacttccc
     2821 ctgccggcgg aacttcctcg accggggtcc gagcgcatgc gaccccgagc agagcaaaga
     2881 tgagcaggat aggtagagac ttcttcattt tctcctccaa ttgacgctga tcgaaccacc
     2941 gctccttgag tctcgatgcg cggttggtct tgcggtgaac cacaactca
//
LOCUS       DASWKS010000345         5138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1279658, whole genome shotgun sequence.
ACCESSION   DASWKS010000345 DASWKS010000000
VERSION     DASWKS010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279658"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VGA78_09885"
     CDS             <1..323
                     /locus_tag="VGA78_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894223.1"
                     /translation="PVPWLAPDPLAGLTWPAPTMITEVMELRAYQSGGEWWLGQRSVS
                     SGEVIQPALGPLAAGGFTTRPLDSLGGSTGSLPDVRQLILVFRLANGDSVTRSLSFSP
                     GGWP"
     gene            320..736
                     /locus_tag="VGA78_09890"
     CDS             320..736
                     /locus_tag="VGA78_09890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894224.1"
                     /translation="MNQRGVALAAALLVVLLGGVLLTISMTWAITEIRAGEAWSVRGR
                     AETAAASSLAIGLPTLHLQLDTVPPGTRVQLASDTLPGMAGSIITAMPLGDSLVLLEA
                     IGQGRATVTVGLLTRLRADSQGVRPVGFRPRFHPVP"
     gene            1106..2149
                     /gene="pilM"
                     /locus_tag="VGA78_09895"
     CDS             1106..2149
                     /gene="pilM"
                     /locus_tag="VGA78_09895"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HEX9894225.1"
                     /translation="MALLGRSRTTVGLDIGSGLIKLVVVSHTGTGPMLTKVAFTQVVD
                     DAIVEGEVMDPGIVADAIKGLFASSGIKPKQLVTAVGGRDVIIKKISMDRMKEAEARE
                     VIRWEAEQHVPFDMDNVELDFQILDPDGEGLQMTVLLVAAKRELVENKLALLAEVGVE
                     PAVIDVDAFALHNAFEVNHPEAMRGLVGLVNLGHEVTNVNILEDGIPILTRDLPVGTR
                     RFKEDLMRERGMSATEADRILQGHEVNDALQPFVQARAEDLAVGIDRAAAFLQTSTRS
                     STGLSRLYTSGGGAKIPGLGKAIADRLRLPVQQANPIERLQVADGVFDAMNVDDVAPL
                     LMLPIGLALRTAA"
     gene            2172..2867
                     /locus_tag="VGA78_09900"
     CDS             2172..2867
                     /locus_tag="VGA78_09900"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEX9894226.1"
                     /translation="MMISVNLRPGTRRGKRRPSFAFSLDRLKGLGSAVKDPLRLVAML
                     AWVAAAGFLGWMYLSTGSQLGELEPKLEETRSEHRRFQDFLAQKRREEVARDSILSQI
                     RTIRQVDGDRYIWPHILNEVAQALPPLTWLINVSYVNAPLAAPLADSTATPPPPPVQL
                     QLTGRTVDIQGYTRFMRQLEDSPWLIDVTAISANTVVESGRAVTAFVLTATFGRPPAD
                     RIQTVSVSESVVR"
     gene            2871..3497
                     /gene="pilO"
                     /locus_tag="VGA78_09905"
     CDS             2871..3497
                     /gene="pilO"
                     /locus_tag="VGA78_09905"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEX9894227.1"
                     /translation="MALSDNPRAASILTILLALLAGYVLWSGDGLSLVGGSGLKARND
                     RVVALRDTIATVQASIDSAKRELARGSVEDVRQRVEEYRATLTLLRQFVPERNEVPNL
                     LDDISSRAKVRGVNLSNVVPQPVQPGPNPFNTHSYEMSVVGRYDQIGRFLTDIAGLRR
                     IIVPIELTMASADPAKAKALGDSTKAMLEAKFKVRTFVKSTGEGADEM"
     gene            3487..3969
                     /locus_tag="VGA78_09910"
     CDS             3487..3969
                     /locus_tag="VGA78_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894228.1"
                     /translation="MRCRASWLALALLALAGCSSGDVEEGAAPEPVALRRRPVAHDSA
                     ADLAGDDQALKREVYAYSGGGRDPFESLLESSLIGPELSDLSLVAIYIDHNVPERSIV
                     VLRERVTSKRYNLHEGERLGRIRVAGIRERDVDFIVDDFGTDRRETLSLRRLQEEQTP
                     "
     gene            3966..>5138
                     /locus_tag="VGA78_09915"
     CDS             3966..>5138
                     /locus_tag="VGA78_09915"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HEX9894229.1"
                     /translation="MRRFARWTFAALGLAAVVVQPAPAAPADGGQVVGVSLMSTPGKA
                     ELVIGIRGSVTVKDFILANPSRLVFDLEGATLATPAQPIYDGVARAGVLNVRVRQNAP
                     GVVRVVLVLDHDRAYTVVQEDDAVRVSFGADDSFLAWSSGTPVAPRLSAPVAPAAATV
                     VTEESPDLDRALPVRVAPVRLSQQRGEPRITVSWDNADIRDVVSGFAALSGHTIILGK
                     GVTGQVTAEIRDKPWSQAFQAILAAQGLSAQEMPGGIIRVDAPTALAELDSLEPLQTE
                     VIRVNYARAGELGKSVEGILTKNRGSVNADTASNSLIITETRSRLAGVVEFARGLDIR
                     TMQVSIQAKIIFVDRTDLEAMGLKYDLGSNNQFFNRLVQRPDPGSDDGEPFQPNVNV"
BASE COUNT          818 a         1714 c         1729 g          877 t
ORIGIN      
        1 tgccggttcc ttggctcgcg cccgatccgt tggccgggct cacctggccc gccccgacca
       61 tgatcaccga ggtcatggag ctgcgcgcct accagagcgg cggcgaatgg tggctggggc
      121 agcggtcggt cagctcggga gaggtgattc agcccgccct gggaccgctg gccgcgggtg
      181 ggttcaccac aaggccgctg gattcgctgg gcggatccac cgggtcgctt ccggacgtca
      241 ggcagctgat cctggtcttc cggctggcga acggcgattc ggtgacacgg agtctgtcct
      301 tctcaccggg agggtggccg tgaatcagcg gggagtggcg ctggctgcgg cgctgctggt
      361 ggtgctgctg ggcggagtgc tgctgaccat ctcgatgacg tgggccatca ccgagatcag
      421 ggcgggtgag gcctggtcgg tccgaggccg ggccgaaacg gcggccgcgt ccagtctcgc
      481 cataggactc cccaccctgc atctgcaact cgacacggtc cctcccggca cccgggttca
      541 actcgcgtcc gacaccctgc ctggtatggc cggcagcatc atcaccgcca tgccgctggg
      601 cgattcgctg gtcctgctgg aagcgatcgg gcagggacgt gccacggtga cggtcggact
      661 gctgacccgt ctcagggccg attcgcaggg ggttcggccg gtcggattcc ggccccgttt
      721 tcacccagtt ccgtaaagcg cctgtggcgc aaggcgtttc gctccggcat cgcgagagat
      781 tccttgcgaa acggtggccg cggccggatt ggtggggtgg gaatgtccca tgttacatct
      841 ggataagaag ttgattgaca atgacttgaa cagtgtcacc caagggtggc atagcggttg
      901 cccgatgtgc gtcctgcacc tcccgttggg tggtacccgg gctggggtat cgcgggtggc
      961 tctggaccag tctttcagcc atataatcgg ctgttgcaga atgacttgtc agtgtcactt
     1021 caagcacatt ggtagcttga caggcgggta ggcaatcgtt tagcgtagcg attggccgtc
     1081 cacctcctta accaactgag ccgctatggc actgctcgga cgctcgcgga ccaccgtggg
     1141 cctcgacatt gggagcggac tgatcaagct ggtggtcgtt tcccatacag ggaccggccc
     1201 catgctgacc aaggtcgctt tcacccaggt ggtggatgac gccatcgtcg agggtgaagt
     1261 catggaccca ggcatcgtgg ctgatgccat caagggtctg ttcgcttcct cggggatcaa
     1321 gccgaagcaa ctggtgaccg ccgtaggcgg tcgtgatgtc atcatcaaga aaatctcgat
     1381 ggatcgcatg aaagaggcgg aggcgcgcga ggtcatccga tgggaggccg agcagcacgt
     1441 ccccttcgac atggacaacg tcgagctgga tttccagatc ctggatccgg acggggaagg
     1501 actgcagatg acggtcctcc tggtcgcggc caagcgggag ctggtggaga acaagctggc
     1561 gctgctggcc gaggtcggcg tcgagccggc ggtcatcgac gtcgatgcct tcgcgctcca
     1621 caatgccttc gaggtgaacc atcccgaggc gatgcggggg ctggtgggcc tggtgaacct
     1681 gggccacgaa gtcaccaacg tgaacattct cgaggacggc atcccgatcc tcacccgtga
     1741 cctgccggtc ggtacccgcc gcttcaagga agacttgatg cgggagcggg gcatgtcggc
     1801 caccgaggcc gaccggatcc tgcagggtca cgaggtgaac gacgcgctgc agccgttcgt
     1861 gcaggcgcgg gccgaagatc tggcggtcgg tatcgaccgc gcggcggcgt tcctccagac
     1921 ctccacccgg tcgagcaccg ggctctcccg gctctatacc tccggcggcg gcgccaagat
     1981 tccgggcctg ggcaaggcca tcgccgaccg gcttcggctg ccggttcagc aagccaatcc
     2041 catcgagcgg ttgcaggtgg cggacggggt gttcgacgcg atgaacgtcg acgacgtcgc
     2101 gccgctcctg atgctgccga tcgggttggc actgcggacg gccgcgtgac ccccgccagc
     2161 gtgatactgc catgatgatc tccgtcaacc tccggcctgg taccaggcgc ggcaagcggc
     2221 gtccgtcctt cgccttcagc ctggatcggc tcaagggcct cggctccgcg gtcaaggatc
     2281 cgctccgcct cgtcgcgatg ctggcctggg tagccgcggc cggcttcctg ggctggatgt
     2341 acctgagcac cggttcccag ctgggcgagc tcgagcccaa gctcgaggag acccgcagcg
     2401 agcaccgccg gttccaggat ttcctggccc agaagcggcg cgaggaagtg gcgcgcgact
     2461 cgatcctgtc ccagatccgc accatccgtc aggtggatgg ggaccgctat atctggcccc
     2521 acattctgaa cgaagtggcc caggcgctgc cgcccctgac ctggctgatc aacgtctcgt
     2581 acgtcaacgc cccgctggcc gcgccgctgg cggattcgac cgcaacgccg ccgccgccgc
     2641 cggtgcagct ccagctgacc ggacgcacgg tggacattca ggggtacacc cgcttcatgc
     2701 ggcagctgga ggattctccg tggctcatcg acgtgaccgc gatttcggcc aacacggtgg
     2761 tcgagtccgg ccgggccgtc acggcgttcg tactgaccgc aacgttcggc cggccgccgg
     2821 cggaccgcat tcagacggtc tccgtgtccg agtcggtggt gaggtaatcc atggcactct
     2881 ctgataatcc ccgcgcggcc tcgatcctca cgatcctgct cgccctcctg gccggatacg
     2941 tcctctggtc cggcgacggc ctcagcctgg ttgggggctc cggcctcaag gcgcgcaacg
     3001 atcgggtggt ggccttgcgg gacaccatcg ccacagtcca ggcgtcgatc gacagcgcca
     3061 agcgcgagct ggcgcggggt tcggtcgaag acgtgcgcca gcgggtcgag gaataccgcg
     3121 ccaccctgac gctgctgcgg caattcgtgc ccgagcgcaa cgaagtcccc aatctgctgg
     3181 acgatatctc ctcccgggcc aaggtccggg gagtcaatct gtccaacgtg gttccgcagc
     3241 cggtgcagcc ggggcccaat ccgttcaaca cccactccta cgagatgtcg gtggtgggcc
     3301 gctacgacca gatcgggcgc ttcctgaccg acatcgccgg gctgcgccgg atcatcgtcc
     3361 cgatcgagct caccatggcc tcggccgatc ccgccaaagc caaggcgctg ggagacagca
     3421 ccaaggcaat gctggaggcc aagttcaaag tacggacctt cgtgaagtcc acgggggagg
     3481 gtgccgatga gatgtagggc ttcctggctc gcgctggcgc tcctggcgct cgcgggctgc
     3541 agcagcggcg acgtcgaaga gggcgcggcc cccgaaccgg tggcgctccg gcgccgcccg
     3601 gtggcccacg actccgccgc cgacctggcc ggggacgacc aggctctcaa gcgtgaggtc
     3661 tacgcctact ccgggggcgg gcgcgatccg ttcgaatcgt tgctcgagag ctcgctgatc
     3721 ggtcccgaac tgtccgatct ctcgctcgtc gccatctata tcgatcacaa cgtgcccgaa
     3781 cgcagcatag tggtgttgcg cgagcgggtc acgagcaagc ggtacaacct ccacgagggt
     3841 gagcgactcg ggcgcatccg ggtcgctggg atccgcgagc gcgacgtgga cttcatcgtg
     3901 gacgacttcg gaaccgaccg gcgggaaacc ctctcgctcc gccggctgca ggaggagcag
     3961 accccatgag acgattcgcc cgttggacgt tcgcggccct tgggctcgct gcggtagtgg
     4021 tgcagccggc gccggcggcc cccgccgacg gcggccaggt ggtcggcgtg agcctgatgt
     4081 ccacgcccgg caaggccgag ctggtgatcg ggatccgcgg ttcggtgacg gtcaaggatt
     4141 tcatcctggc caaccccagc cgtctggtgt tcgatctcga gggcgccacc ctcgccactc
     4201 cggcccagcc gatctacgac ggcgtggccc gggccggtgt gctcaacgtg cgggtccggc
     4261 agaacgcccc cggcgtggtg cgcgtcgtcc tggtgctgga ccacgaccgc gcctacaccg
     4321 tggtccagga ggatgacgcg gtccgggtct ccttcggggc cgatgattcg ttcctggcct
     4381 ggtccagcgg caccccggtc gccccgcgcc tcagcgcgcc ggttgccccg gccgccgcga
     4441 ccgtggtgac cgaagagagc ccggacctcg accgcgccct tccggtgcgg gttgcgccgg
     4501 ttcgcctctc acagcagcgg ggcgagcccc gcatcaccgt ctcctgggac aacgccgaca
     4561 tccgggacgt cgtctccggg ttcgcggcgc tgtcgggtca caccatcatt ctgggcaagg
     4621 gcgtaacggg ccaggtcacc gccgaaatcc gcgacaagcc ctggtcgcag gccttccagg
     4681 ccattctcgc cgcgcagggt ctctcggccc aggaaatgcc cggcggcatc atccgggtcg
     4741 acgcgccgac cgcgctggcc gagctcgact cgctcgagcc gctccagacc gaggtgatcc
     4801 gggtcaacta cgcccgggcc ggcgagctgg gcaaatcggt cgaaggcatc ctgaccaaga
     4861 accgcggctc ggtgaacgcc gataccgcgt ccaattcact gatcatcacc gagacccggt
     4921 cgcggctggc cggcgtggtc gaattcgccc gcggcctcga catccgcacc atgcaggtct
     4981 ccatccaggc caagatcatc ttcgtggatc gcaccgatct cgaggccatg ggcctgaagt
     5041 acgacctggg atccaacaac cagttcttca accggctggt gcagcggccc gatcccggtt
     5101 cggacgacgg cgagccgttc cagcccaacg tgaacgtg
//
LOCUS       DASWKS010000346         2441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2416224, whole genome shotgun sequence.
ACCESSION   DASWKS010000346 DASWKS010000000
VERSION     DASWKS010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2416224"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VGA78_09920"
     CDS             complement(<1..581)
                     /locus_tag="VGA78_09920"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9894230.1"
                     /translation="MLRAAQLAVEEINASGGIGGRSIQLVARDDTGDPDSAVSVAAEL
                     VAEEVVAVVGHVYSGTTLAAAPVYGASEVPVPVITPSSSSPEVAQAGPHVFRLCPTDL
                     EHGAALATWIRQGLGFSRGAVLYLNNPYGRGVRQSFVARFLVLGGSIVESDPYLGDTP
                     DVGPYLDRIRSTGAEFLVVAGNRLEAETVLQLAR"
     gene            complement(703..1185)
                     /locus_tag="VGA78_09925"
     CDS             complement(703..1185)
                     /locus_tag="VGA78_09925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894231.1"
                     /translation="MLQVLLLAALVIPARLTAQGSRPLEFLGFNPGTSLKQVAALVET
                     HGGEWRCVPSRVDRRFSECRGVISPQGLGELNIIGSMVNGKAAVLLIEGPVDDVLLTR
                     WVDNLTSSFGTVSARLANRQAMWQWTRQRRMIRVTTRIDQGIRVVSVSLVDGPILDAL
                     "
     gene            complement(1208..1408)
                     /locus_tag="VGA78_09930"
     CDS             complement(1208..1408)
                     /locus_tag="VGA78_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX9894232.1"
                     /translation="MAQGTVKWFNDAKGFGFIAQEGGKDVFVHHTAIQAEGFRSLREG
                     DQVEFEIVEGPKGLQASNVRKV"
     gene            1786..2400
                     /locus_tag="VGA78_09935"
     CDS             1786..2400
                     /locus_tag="VGA78_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894233.1"
                     /translation="MPTRETVSIRSFSDRAEALGHFVVRAGESPRFLAFDDVAGCPVD
                     TALAALEWTMVVGIMLDDDLLHAARLTSETAAALVERRTGDGRRFVYLGPRLDAPPMD
                     VFEGRVLFDEPGVKAVEFVQRSHALAHFFRATAGDAVLVSMLGRRAPELRHIRRWFAP
                     IVQELDTPSQLIGGWWAAGSGGALFVSGFPEQPAYRYIEVGLES"
BASE COUNT          423 a          787 c          794 g          437 t
ORIGIN      
        1 cgggccagct gtagaaccgt ttccgcctcg agccggtttc ccgccacgac caggaactcc
       61 gccccggtgg agcgaatgcg atcgagatag ggtccgacgt ccggagtgtc ccccaggtag
      121 ggatcggact ccacgatgga accgcccagg accaggaacc gtgcaacgaa tgattgtctg
      181 acgccgcggc catacgggtt gttgagatag agcacggcgc cccgggaaaa ccccagaccc
      241 tgacggatcc aggtagccag ggcagcgccg tgttccagat cggttgggca gagccggaaa
      301 acatgagggc ccgcctgggc cacctcaggc gacgatgacg agggtgtgat taccggtact
      361 gggacctccg aggctccgta taccggggcc gccgcgagcg tggttccgga gtagacatga
      421 cccaccaccg ccaccacttc ttcggccacc agttcggccg cgaccgagac tgcggaatcg
      481 gggtctccgg tatcgtcccg agccaccagc tggatggatc gtcccccgat gcccccggag
      541 gcattgatct cctcaaccgc cagctgggcg gccctgagca tcggcccgcc gaccgcgtcc
      601 gaaaacgggc cggccagacc gatgcgtacg ggttccgacg tagaacgaca ggctgtgaaa
      661 agaacgagca acagggctcg gcgattcaac aacgcaccgt cctcacaggg cgtcgagtat
      721 tggaccgtcc accagactga ccgacacgac ccggatgccc tggtcgatcc tggtggtcac
      781 ccgaatcatg cgacgctgac gggtccactg ccacatggct tgccggttgg cgagccgggc
      841 cgagaccgtg ccgaagctgc tggtcaggtt gtcgacccag cgggtgagca gcacgtcatc
      901 caccgggccc tcgatcagga ggaccgcggc cttcccgttg accatggacc cgatgatgtt
      961 cagctcaccc aggccctggg gactgatcac gccccggcat tccgagaagc ggcggtccac
     1021 ccgcgagggg acgcaacgcc attcccctcc gtgagtttcg accagcgctg cgacctgctt
     1081 caacgacgtg ccgggattga aacccaggaa ttcgagcgga cgcgagccct gcgccgtcag
     1141 ccgggcgggg atgacaagcg ccgcgagcag gagaacctgc agcatcggtc ctgtcggcaa
     1201 tctcgcctca gaccttccgg acgttggaag cctggagtcc tttgggaccc tcgacgattt
     1261 caaactccac ctggtcgcct tccctgagcg agcgaaaccc ttcggcctga attgctgtgt
     1321 gatgtacgaa aacatctttc ccaccctcct gcgcgatgaa gccgaacccc ttggcgtcgt
     1381 tgaaccactt tacagttccc tgcgccatgg tgctacctca tgctgtcggg gagccgggag
     1441 gctcctgtgg aaccctggcc ctggtagggg ccaggaaaaa agccgctcgg tcgggtagac
     1501 cagcggcatg ggctctctgg tggaggttgt ggcgggtact gcgaatccca tacgggagcg
     1561 aacatccgcc ccgttggggg gtttgtcaat agaggggtgg gagagcctcg ggttcctggt
     1621 tccgggtgcc ccggtgcggt gcaccgagct gtgccatgtg ttgtgccgtg tactgtgcca
     1681 tgttcctggt gccgcgtcac ttgtcacccg gaactacggc accgcacctg gcaccgccac
     1741 ccggtacttg gaacgcggaa cggggaactc ccctattatt cacccatgcc cacccgagaa
     1801 accgtcagca tccgtagctt ttccgaccgg gcggaggccc tggggcattt cgtggtccga
     1861 gccggcgagt ccccccgctt cctggccttc gatgacgtgg ccggatgtcc ggtggatact
     1921 gccctggcgg cactggagtg gaccatggtg gtggggatca tgctggatga tgatctgctt
     1981 catgcggccc ggctcaccag cgaaaccgcg gcggccttgg tggagcgccg caccggggac
     2041 ggccgtcgtt ttgtctatct gggcccccgg ctggatgcgc ccccgatgga tgtctttgaa
     2101 ggccgcgtgc tgttcgacga gccaggggtg aaagcggtgg agttcgtgca gcgctcccac
     2161 gccctggctc acttcttcag ggcgaccgcc ggtgatgcgg tcctggtctc catgctgggc
     2221 cgtcgggctc ccgagctgcg gcacatccgg cgctggttcg cgccaattgt gcaagaactg
     2281 gacacaccca gccagttgat tggaggatgg tgggcggccg gctccggggg agccttgttc
     2341 gtctccgggt ttccggagca gcctgcctat cggtatatcg aggtggggtt ggagtcctga
     2401 ccaatagtcg cctaaggctt gccgcctgac tccgcaacgc t
//
LOCUS       DASWKS010000347         4080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3490222, whole genome shotgun sequence.
ACCESSION   DASWKS010000347 DASWKS010000000
VERSION     DASWKS010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3490222"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VGA78_09940"
     CDS             <1..898
                     /locus_tag="VGA78_09940"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9894234.1"
                     /translation="GDPLMQSAMLQLDKVSRTNSTVLLLGESGTGKELAARFVHEKSP
                     RADGPFVPVNCAAISETLMESEIFGHEKGAFTGALAARRGRLELAAGGTFFLDEIGEL
                     EVELQAKLLRVVQERRFERVGGTRTIEADVRWIAATNRDLTAMISQGTFREDLCHRLA
                     VFPVQLPPLRVRRTDLLPLAESLLARIGAELGRPGLTLDDSARDKILGCAWPGNVREL
                     ANALERAAILTEGDVVRGDELQVSLTLPGSEAAGRTMAEIERDAIRRALDEAAGNRRR
                     AARRLGIGERTLYDKLRRYGIN"
     gene            complement(903..1283)
                     /locus_tag="VGA78_09945"
     CDS             complement(903..1283)
                     /locus_tag="VGA78_09945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894235.1"
                     /translation="MKPDGPTRKKPRRPLIVLVDSGKREYHDALTAAGYNVVGVSSTK
                     EALSHRPRPDALILELVVPDDELASLRTWKSGRRTRAMTLIALASAARQEAILKVGAT
                     FCRYPCPPEELVEVLRKVIPLPNL"
     gene            complement(1293..1709)
                     /locus_tag="VGA78_09950"
     CDS             complement(1293..1709)
                     /locus_tag="VGA78_09950"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9894236.1"
                     /translation="MPPVTDQPGALDGLRILVVDDDPESLELVAELLEMNGAEVQRAR
                     GVTQAREVLLRFRADLVISDLSMPEGDGFDLIMEIRRLPAEAGGDTPAIAFSGSSDPL
                     SRARALAYGFQEYVPKPVDSFLLVNTVAALARRATR"
     gene            complement(1886..2344)
                     /locus_tag="VGA78_09955"
     CDS             complement(1886..2344)
                     /locus_tag="VGA78_09955"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX9894237.1"
                     /translation="MHSLNPAYLEALYRTVNASPFPRHLPMRIVEVGPGNARIELEVG
                     ECHLQPFGIVHGGVIATLIDTATFWAAFGAIPEDAGLVNIDLKLNYLQSVTRGRLVAL
                     GQSIRAGRTITYAEAHVRGEDGGLIAHGTSTLMVLPGKGFPLGPPKHLPR"
     gene            complement(2720..>4080)
                     /locus_tag="VGA78_09960"
     CDS             complement(2720..>4080)
                     /locus_tag="VGA78_09960"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEX9894238.1"
                     /translation="RVMKRLPLVLVLGLAPLAGCNDVATPPDPPLEPSIDAQLRASIG
                     NWGIVPIGPMPAQNPAQVELGRALFFDKILSGNRDIACATCHEVSTSLGDGRSLSVGT
                     GGTGVGPARRLGPGRQFTPRSAPSLLNTGLGLFYIFWDLRLSGAHGQFVTDSNVTLPP
                     GLPNILTAQAMLPVLNRQEMRGVPGDLDRFGNPNELALIGDEQSAEVWNAIMNRLLAV
                     SEYVAMFNTAFPGSGRPRFEHAARALATFQMEEFTRTRSPFDRFLDRDDPAMTLEQKR
                     GGLLFFGRAQCSSCHNGPFLGGQGLANVGAPQIGPGGTRQPPLDLGRGEHEGNEFYRF
                     AFRVAPLRNVELTAPYFHSGAYRTLEAVVRHYNDVPEALRQYDPSQLDPDVRPWYHGD
                     PATVGAILQTLDGRFQRPLELTDTEISELVAFLRALTDPAARDLRSAAPARVPSGLPV
                     RE"
BASE COUNT          701 a         1320 c         1412 g          647 t
ORIGIN      
        1 gggcgacccg ctcatgcaat ccgcgatgct tcagctcgac aaggtatcgc gcaccaattc
       61 aaccgtcctg ctgctggggg agagcggcac cgggaaggag ctggcagccc gcttcgtcca
      121 cgagaagagc ccgcgggccg acggcccctt cgtaccggtg aactgcgcgg cgatctcgga
      181 gaccctgatg gagagcgaga tcttcgggca cgagaagggc gccttcaccg gggcgctggc
      241 ggctcgacgg ggacgactgg agctggcggc cggcggcacg ttcttcctgg acgagatcgg
      301 cgagctcgag gtcgaactgc aggcaaagtt gctgcgagtg gtgcaggaac gccgcttcga
      361 acgggtggga ggcacccgca cgatcgaagc ggatgtgcgg tggatcgcgg ccactaaccg
      421 ggacctgacc gccatgatct cacaggggac ctttcgagag gatctgtgtc atcgtctcgc
      481 ggtgttcccg gtccagctcc ccccgctccg ggtgcggcgg accgatctcc tgccgctcgc
      541 cgaatcgctg ctggcccgca tcggcgccga gctgggtcgc cccgggctta ccctggatga
      601 cagcgcccgg gacaagattc tcgggtgcgc ctggcccggg aacgtgcgcg agctggccaa
      661 cgctctggag cgcgcggcca tcctgacgga gggtgacgtg gtacggggcg acgagctgca
      721 ggtgtcactg accttgcccg gcagcgaggc ggccggccgc accatggcgg agatcgagcg
      781 ggacgcgatt cggcgggcgc tggacgaggc cgccgggaac cggcgccgcg cggcccggcg
      841 gctgggcatc ggcgagcgga ccctgtacga caagctgagg cgctacggca tcaactgaag
      901 gctcagaggt tgggcagggg aatcactttc cgaaggactt ccaccaactc ctccggaggg
      961 cagggatagc gacagaaggt ggcgccgacc ttcagtatcg cttcctgccg cgccgcgctc
     1021 gccagggcga tcagggtcat ggcccgggtg cggcgacccg acttccaggt ccggagcgac
     1081 gccaactcgt cgtccggaac caccagctcc aggatcagcg cgtccggccg agggcggtga
     1141 ctcagcgctt ccttcgtgct ggagacaccc accacgttgt acccggcggc cgtgagcgcg
     1201 tcgtggtact cccgcttgcc gctgtccacc agtacgatga ggggccgacg cggcttcttt
     1261 cgggttgggc cgtccggttt catcggccgg ttctaccggg tcgcgcggcg cgccagggcg
     1321 gccaccgtgt tcaccagcag aaaggaatcg accggcttgg gaacgtactc ctgaaatccg
     1381 tacgcgagcg ctcgggcacg cgagagcgga tcggaggagc cggagaaggc aatggccggg
     1441 gtatcgcctc cggcctcggc cgggagccgg cggatctcca tgatgagatc gaatccgtca
     1501 ccctcaggca tcgagaggtc ggaaatcacc agatcggctc gaaaccggag cagcacttcg
     1561 cgcgcctgcg tgacgccacg ggcgcgctgg acctcggctc cgttcatctc gagcagctcg
     1621 gcgacaagct cgagggattc cgggtcgtcg tccaccacca ggatccgaag tccatcgagt
     1681 gcgcccggct ggtcggtcac gggcggcacc cgtgaagcct cgcggatcga gggcagcggt
     1741 agaacttgat gcgaattggt gcaccctcac tgcggctggt catgcgccgc gaaaacctgc
     1801 gacttcgcgc cacctggcac gggacgctag tggtgccggc tcgtcccggc aagtggaaag
     1861 cacaacctcg cacgagcgtc gctgattacc gcggcaagtg cttcggtgga cccaggggaa
     1921 agcctttccc cggcaggacc atgagggtcg aggttccgtg cgcgatcagc ccaccgtcct
     1981 ccccgcgcac gtgtgcctca gcgtacgtga tggtccgccc cgctcgaatc gattgcccca
     2041 gcgccaccag ccggcccctg gtaaccgact gcaggtaatt gagcttgagg tcgatgttca
     2101 ccaggccggc atcctccgga atggcgccga acgccgccca gaaggtggcg gtatcgatca
     2161 gggtggcgat cacgcccccg tgcacgatcc cgaacggttg cagatgacac tcgcctacct
     2221 ccagctcgat ccgggcgttt cccggcccga cttccacgat ccgcatcggc aggtggcgcg
     2281 ggaacggact cgcgttcacg gtccggtaga gggcctcgag ataggcggga ttcagcgagt
     2341 gcatggttga cacggttggg gtggatccag tcctggtgga agctgcaaac gaaggtaatc
     2401 gctaccctat gtgcgttcct tactggtttg ttgagcgacc gtcccgcgcg gggtgtcttg
     2461 tccgattttc gagggtccag gacgcttgtt tggcacggat gaagcggatc agaaggatgc
     2521 ttcggacaac gatcccgtta gtatcaatcc gccgaatccg aggtcatccg ctgaatcagt
     2581 tcccaccctg tatcctggat catcggaggc aggttcagcc tcccaagcag attggcctca
     2641 ttgatcagta tttgggggga cgagttggaa cggcaccgac aggccctacc agtgattccg
     2701 ccagctggga tttcctgagt cactcccgga ccggaaggcc gctcggaacc ctggccgggg
     2761 ctgcggaacg caagtccctc gccgcggggt cagtcagcgc cctgagaaac gccaccaact
     2821 cgctgatctc ggtgtcggtg agctcgaggg gccgctgaaa ccgcccgtcg agcgtctgca
     2881 ggatggcgcc caccgtggcc gggtcgccgt gataccacgg ccgcacatcc ggatcgagct
     2941 gggaagggtc atactggcgg agcgcttccg gcacgtcgtt gtagtggcgc accaccgcct
     3001 cgagggtgcg ataggcccca ctgtggaaat aaggcgcggt gagctccacg ttgcggagcg
     3061 gggccacccg gaaggcgaac cggtagaact cgttcccctc gtgctctccc cgccccaggt
     3121 cgaggggcgg ctggcgggtt ccgccggggc cgatctgcgg cgctcccacg ttggcgaggc
     3181 cctggccgcc caggaagggg ccgttgtggc aggaggaaca ctgggctctg ccgaagaaga
     3241 gcaggccgcc ccgcttctgc tccagggtca tcgctgggtc gtcccggtcg agaaagcgat
     3301 cgaacggcga gcgggtccgg gtgaactctt ccatctggaa ggtggccagc gcccgggccg
     3361 cgtgctcgaa gcggggccgg cccgatcccg gaaacgcggt gttgaacatc gccacgtact
     3421 cggagacggc caggagccgg ttcatgatcg cgttccacac ttcggcggac tgctcgtcgc
     3481 cgatcagggc gagctcgtta gggttaccga accggtccag gtcgccgggc acaccccgca
     3541 tttcctgccg gttgaggacc ggcagcatgg cctgggcggt gaggatgttg ggcaaaccgg
     3601 gtggcagggt cacgttcgaa tcggtgacga actgcccgtg cgcgcccgac agccgcagat
     3661 cccagaagat gtagaacaat cccagcccgg tattgaggag ggacggggcg ctgcggggag
     3721 taaactggcg gccgggcccc agccggcggg ccgggcccac ccccgtgccg ccggtgccca
     3781 ccgacaacga acgcccgtcg cccagcgagg tcgagacctc atggcaggtg gcgcaggcga
     3841 tatcacgatt gccgctcaga atcttgtcga agaacagcgc ccgacccagc tccacctgcg
     3901 ccgggttctg ggccggcatg gggccgatcg ggacgatacc ccagttgccg atgctggccc
     3961 gcagctgggc atcgatcgag ggctccagcg gcggatcagg tggcgtggcc acatcgttgc
     4021 agcccgcgag cggagccagt cccagcacca ataccagcgg aaggcgcttc ataactcgac
//
LOCUS       DASWKS010000348        10333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3490419, whole genome shotgun sequence.
ACCESSION   DASWKS010000348 DASWKS010000000
VERSION     DASWKS010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3490419"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..187
                     /locus_tag="VGA78_09965"
     tRNA            101..187
                     /locus_tag="VGA78_09965"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:135..137,aa:Ser,seq:cga)
     gene            625..2985
                     /locus_tag="VGA78_09970"
     CDS             625..2985
                     /locus_tag="VGA78_09970"
                     /inference="COORDINATES: protein motif:HMM:TIGR04312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor B family protein"
                     /protein_id="HEX9894239.1"
                     /translation="MRPIAISVTVLLTAAFPAAPAAGQGFGSTVAAGSREIFVSEPVT
                     QFSPGTVYVYTRSGNAWRESARLSASDGVPQDRFGRSLSVDGDRLLIGATSLDSSRGA
                     AYVFERDGSGAWKQSAKLLPATVVAGDAYGRQVLLKGDLAYVAAWGRNQSRGTITIFR
                     RGANGRWTEEQSLVASDGQPNDFFGSSVAIDGDLMLVGAAQKDSSRGAVYVFHRDPAA
                     GQWKEESKIVRPGTLRNTRFGTAVAFHNGRALIGMPGLDQSIGAVYVYARAGDRWVER
                     MRLAPFDGLQFAQFGSIIQTMPGEVWIGAPGADAQGRIYRFAIGTDSSVTGVTKLSHT
                     ETARGDQFGGVFAVVGDAAVVGSPGDDHGAGTAVILARGSGTWATGKKVLSEEKTLAA
                     IRGSKRDCTTGKVELFDCSQVDLLAYMPVKDIGGSRGVRLNDVWGWTDPTTDREYALV
                     GRIDGTAFVDITDPVNPRYLGDLPMTPGAQANAWRDIKVYQDHAFIVADGSLQHGMQV
                     FDLTRLRNVRSAQKFSADVTYDRIASAHNIVIDTTAGFAFAVGSNGGGETCGGALHMV
                     DIREPKNPKFAGCFADPSTGNQRTGYTHDAQCLVYDGPDTSYTGRHICFNSSENALGI
                     ADVTDKANPKPLSKASYPNVGYTHQGWITDDRRYFYVDDEGDEIQGTVPGTRTLIWDV
                     SDLDDPVLAGQYISSNRASDHNLYVKGNLMFQSNYSSGLRILDISDPKNPKPVGNFDT
                     NPVGVDVPGFTGSWSNYPYFKSGTIVVTSIQEGLFLVRPAGRPLIP"
     gene            complement(3089..6379)
                     /locus_tag="VGA78_09975"
     CDS             complement(3089..6379)
                     /locus_tag="VGA78_09975"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9894240.1"
                     /translation="MIDPVVGSALTDQYLIEREIAAGGMGTVYLARDLRHGRRVAVKV
                     MNPIGAAGTQQVLTELRNAARLQHPHILPVYDSGEAAGRTWLVTPFMSEGSLREVLAT
                     RGRLPIREVLPLLTDIGAAVQYAHDHQILHGDIKPENILLDQGHAYLADFGISRAIHA
                     DWSAIRARPPGAGTPDYVSPEQAAGGSSVDGRADLYSLACVAVELLSGRAPFVADTPT
                     RSLAKRYLAPPDVRALVPELPYAAAQVLERALALDPVRRQSSVRAFLAELETSLQGHR
                     FARLGRGWRGLIGAYRRGSAGALGAWAFDLRSAIRSLRRRPGFSLTVAGTLALALGAL
                     TATMAVVDGILLRSLPYRDPDRLVALCELHPSLAQFCVASPPNATDWERRSKSFSAFG
                     LGRDWGFTLTRDGKPVGLSAGLASDGLFRVFQLEPLLGRLIQPEDLAAGRRVAVLSHG
                     LWASTFGADSSIVGRGIVLDDSTWTVVGVLRPAASVPLLETVQLWAPLPFRPDDPSQR
                     DWRGFRTYARLMPGVSVEAAGDDLRRIARDLGRDFPASNEGWGVEVRTLHDEVVGPVR
                     LLLLVFLSATGLVLVVAAANIANLMLARASGRARELAIQAAVGGGRARLVRTLLLESL
                     VIALVGIGLGVIVARSALAAFLHFAPTGVPRLENVGLGGGPLAVGAMLGLLVAFLAGL
                     VPVLRMSRLDLSIALRGAGADSGPERGWGRAALVVTQVAVAVTLLTAAGLLTRSFVNL
                     IRWRPGFETEHLVVVWTSASPGRFTRGADVALLQRQAREIIGGVAGVTGVANVSNGPL
                     FGGIEPGTFVSREEGPRREVAARWYDASPGYFETLGLPLVRGRAFTAADVPGSTPVAV
                     VNETFARRLWPGADPIGRRVAEDRPDATVLEVVGVVQDITPFRAGEPPVPGIWWPYDQ
                     APRWGAYLVLRTAVPPVNLVPAIEERLEATVPGLQLGTFRTMPELISARLVTPRFNLV
                     LIAGFATLALLMAVVGLYGLVSFLVALRLRELAIRMALGASGIAVRRQVFARSLRLAL
                     VGVGIGLVGAVALGRLLRTLLAGVSPLDPATLTLVPVVLLACVVLATWQPARRASRAD
                     PMTLLRAE"
     gene            complement(6440..7351)
                     /locus_tag="VGA78_09980"
     CDS             complement(6440..7351)
                     /locus_tag="VGA78_09980"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX9894241.1"
                     /translation="MSKLILGLVIIFIGLAVRSARRGPGRISGGLIGLVALALIIIGV
                     ATLGTSSVVVIDPGQVGVQHAFGKVSTRPLLSGIRFVPPWSQVERYSTREEQYPAAGA
                     EAEQMPALSSEQMGMQVDVAIRWQIDPMTAPHIFTEIGNQEQIHAVVLNAIRNGVRDG
                     MVQFSINDLGRRNEIARVMQAEVDSALITTPRTGGEPFKIAVVTAFFLRNLEPPAQVV
                     QAINNKIAQEQQIQTERHRVEVARLQSEQQKLLNLTLTPEALMKQYLEVLHDMRQSNN
                     LVVLVPTEGGTPLLNLSQLRGNLRQGQ"
     gene            7689..>10333
                     /gene="topA"
                     /locus_tag="VGA78_09985"
     CDS             7689..>10333
                     /gene="topA"
                     /locus_tag="VGA78_09985"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEX9894242.1"
                     /translation="MAKLVIVESPTKARTIKAFLPRGYQVEASMGHIRDLPDGAKDVP
                     AKYKGQEWARLGVNVENDFEPLYVVPVEKKKVVKELKEALKDADELLLATDEDREGES
                     ISWHLVQVLSPRIPVKRMVFHEITKEAIQEAIEATREVDDRLVRAQETRRILDRLVGY
                     TLSPLLWKKIAWGLSAGRVQSVAVRLLVQRERERRAFRAGTWWDLKATLRHEKQAFEA
                     MLTALDGVRLATGKDFDEATGKLARAKDVVLLDQARAEALRDRLLKAPWTVTSVEEKP
                     QIRRPWAPFTTSTLQQESNRKLRLSARETMRTAQSLYERGFITYMRTDSVNLSNQAIT
                     AARECIDRLYGKSYLAAKPRHYSSKGAHTQEAHEAIRPAGSHFRTTEETGLHGVERDL
                     YDLIWKRTVASQMADARITALAVLLEAEKAQFRAAGKRIDFAGFLRAYVEGSDDPEAA
                     LEDQEVLLPDLAVGDAPACEALEAVSHVTQPPARFTEATLVKELEADGVGRPSTYASV
                     IGTILERGYTVKQGQALVPTFTAIAVTLLLEKHFPHLVDIKFTAKMEQSLDDIAEGNA
                     EWLPYLREFYLGEEGLRHQTEVKTKDIDPAVARSVDLIGLDASVRIGRFGPYIERNDN
                     GEPLRVSLPNDIPPADLTGEKIEALLREKKEGPAELGRDPATRLPVYVRTGQYGPYVQ
                     LGEATDESPKPKRMSLPRGVKPEDATLDLALGLLSLPRLLGAHPESGGKVLAGLGRFG
                     PYVVHDQGKAGKDYRSIRGDDHVLTITLGRALEMLAQPKLGRGRRAEPKPLREVGLHP
                     DDQQPIHLFDGRYGPYVKHGDVSASIPRGQDPTTVSLDQAVELIAARAGSKRVGRKGS
                     KRAKAKATKPVQPESKAVEGRTKSK"
BASE COUNT         1836 a         3498 c         3440 g         1559 t
ORIGIN      
        1 ccgggcgcca gaccgagtta tttttgcggc ccagtgctcc cgatgctgcc ggccggtccc
       61 cggctcttga cccgggcgct aagttgttgt gatacaatga ggacaggtgt ccgagtggct
      121 gaaggagccg gtctcgaaaa ccggtatacc cgtaagggta tcgagggttc gaatccctcc
      181 ctgtccgtca ggggtgcctg ggtggttggt cgcggaggcc agcttcccag ctcgagggtt
      241 gacctgcggc cgcttcgcgt cctcggtccg ctcgcccggc tgcgcgggct cgcgacgaat
      301 ccctccctgt ccgttgtgat gccgattcta gcggtgctcc aatccctcgt tcccggtgac
      361 tgtcttctca ccggcctttg cgccgccagc caggcgacac ctgtggtgcc ctccggggcc
      421 atgttcctcg ccatcgggct ggtgctcata ggggcttggg gcctggtccg gaagcagggt
      481 cgggccggga agtagccgcg cctcccgtct gccgcctccc ccctccgcta gtttcgaaac
      541 cctccgctag atcggaatcg taggagtcag catccttcgc ctggtttcgt gcgtccaata
      601 gatcgtccca cttccagagg ttccatgcgt cctatcgcca tttccgtcac ggttctgctc
      661 accgccgcgt tcccagccgc tcccgccgcc gggcagggct tcggcagcac ggtggccgcc
      721 gggagccgcg agattttcgt ctccgaaccc gtcacccagt tctcacccgg gaccgtatac
      781 gtctataccc gctccggcaa cgcctggcgg gagtccgctc gcctctccgc ctcggatggc
      841 gttccccagg accggttcgg tcggagcctt tcggtcgatg gcgaccggct gctgatcggc
      901 gcgacctcgc tcgacagctc ccggggtgcg gcctacgtgt tcgaacggga cggctccggt
      961 gcttggaagc aaagtgcgaa actgttgccg gccacggtgg tggcgggcga cgcctacggc
     1021 cggcaggtgc tgctcaaggg cgacctcgcc tacgtggccg cctggggccg gaaccagagt
     1081 cgcggcacca tcacgatctt ccgccgcggg gccaacggcc ggtggaccga ggagcagagc
     1141 ctcgtcgcca gtgacgggca gcccaatgat ttcttcggca gcagcgtggc tatcgatggc
     1201 gacctgatgc tggtaggtgc cgcgcaaaag gactcgtccc gcggtgcggt gtacgtcttc
     1261 caccgcgacc cggccgcagg ccaatggaag gaagagtcca agattgtccg gcccgggacg
     1321 ttgcggaaca cccggttcgg tacggcggtc gcctttcaca acggtcgggc cctgatcggg
     1381 atgccaggac tggatcagtc catcggcgcg gtctatgtct atgctcgggc tggtgaccgc
     1441 tgggtggagc ggatgcggct ggcgcccttc gatggccttc agttcgccca gttcggctcg
     1501 atcatccaga ccatgccggg ggaggtgtgg atcggcgccc cgggggccga cgcgcagggg
     1561 cggatctatc ggttcgcgat agggacggac agttccgtca ccggcgttac caagctctcc
     1621 cacaccgaga ccgcccgagg cgaccagttc ggcggagtgt tcgcggtggt gggagacgcc
     1681 gccgtggtgg gttcccctgg ggacgaccat ggcgcgggca ccgcggtgat cctggcccgc
     1741 ggcagtggca cctgggccac cgggaagaaa gtcctgagtg aagagaagac cctggccgcc
     1801 atccgcggca gcaagcgcga ctgcaccacc ggcaaagtgg agctgttcga ctgcagccag
     1861 gtggacctgc tggcctacat gccggtcaag gacatcggcg gcagccgcgg ggtccggttg
     1921 aacgatgtgt ggggctggac cgacccgacc accgaccggg agtacgcgct ggtgggccgg
     1981 atcgacggca ccgcgttcgt cgacatcacc gatccggtca atccccggta cctgggcgat
     2041 ctgcccatga ccccgggcgc gcaggccaac gcctggcgcg acatcaaggt ctaccaggac
     2101 cacgccttca tcgtggccga cggctcgctg cagcatggta tgcaggtgtt cgacctgacc
     2161 cggctccgca acgtgcgctc ggcccagaag ttcagcgccg acgtcaccta cgaccggatc
     2221 gccagtgccc acaatatcgt catcgacacc acggccggct tcgccttcgc ggtcggctcc
     2281 aacggcgggg gcgagacctg cggcggcgcg ctgcacatgg tcgacatccg ggagcccaag
     2341 aacccgaaat tcgccggctg cttcgccgat cccagcaccg gcaaccagcg caccggctac
     2401 acccacgacg cccagtgcct ggtgtacgac ggcccggaca ccagctacac cggacggcac
     2461 atctgcttca acagctcgga gaacgcgtta ggcatcgcgg acgtgaccga caaggccaac
     2521 cccaagccgc tgtccaaggc gtcctatccc aacgtgggct acacccacca gggctggatt
     2581 acggacgacc ggcgctactt ctacgtggac gacgaagggg acgagatcca gggcacggtg
     2641 ccggggaccc gaaccctgat ctgggacgtg agcgatctgg acgatccggt gctggcgggt
     2701 cagtacatct ccagcaaccg ggccagcgat cacaatctgt acgtgaaggg caacctgatg
     2761 ttccagtcga actactcgag cgggctccgg atcctggata tcagcgatcc caagaacccg
     2821 aagccggtgg ggaacttcga caccaatccc gtgggggtcg atgtgcccgg gttcaccggc
     2881 tcgtggagca actatcccta cttcaagagc ggcaccatcg tggtgacgtc gattcaggag
     2941 ggcctgttcc tggtgcggcc ggcggggagg ccgttgattc catgaacgca ttgacgattg
     3001 acgattgacg attgacgatt gacgactgct cacctcagtt cccgagctgg ggcaagcaat
     3061 cgtcaatcgt caatcgtcaa tgcagttgtt attccgcccg cagcagcgtc atcggatccg
     3121 cccggctggc ccggcgggcc ggctgccagg tggcgagcac gacgcaggcc agcagcacca
     3181 ccggtaccag cgtcagcgtc gccgggtcga ggggcgaaac ccccgcgagt aaggtgcgga
     3241 gcaggcggcc gagggccacg gccccaacca ggccgattcc gactcccacc agggccagcc
     3301 tcaggctccg ggcgaacacc tgccgccgga cggcgatccc cgaagcgccc agggccatcc
     3361 ggatcgccag ctcgcgcagc cggagcgcga ccagaaagct caccagccca tagaggccga
     3421 ccacggccat cagcagggcc agcgtggcaa accccgcgat gagcaccagg ttgaagcggg
     3481 gtgtgaccag ccgggccgaa atcagttccg gcatggtccg gaaggtcccg agctggagtc
     3541 cgggcaccgt ggcctcgagc cgttcctcga tggcaggcac gaggttcaca ggcgggacag
     3601 cggtccgcag caccagatac gcaccccacc gcggcgcctg atcgtagggc caccagatgc
     3661 ccggcaccgg aggctcgccg gcgcggaagg gtgtgatgtc ctggaccacg cctaccactt
     3721 cgagcaccgt cgcgtcgggc cggtcctccg cgacccgacg tccaatcggg tcagcgcccg
     3781 gccacagccg tcgggcgaag gtctcgttga ccaccgcgac gggagtcgat ccgggcacat
     3841 cggcggcggt gaaggcccgt ccccggacca gcgggagacc gagggtttcg aaataccccg
     3901 ggctggcatc gtaccaccgc gccgccacct cgcggcgcgg cccctcctcg cgcgacacga
     3961 aggtcccggg ctcgatcccc ccgaacagcg gaccattaga gacgttggcg acgccggtga
     4021 cgcctgcgac gcccccaatg atctcccgcg cctggcgttg gagcagagcc acgtcggccc
     4081 cgcgggtaaa gcgccccggg gaggcggacg tccagaccac gaccagatgt tcggtctcga
     4141 atcccggtcg ccagcggatc aggttgacga aacttcgggt aagcagaccg gccgcggtga
     4201 gcagagtcac ggccacggcc acctgggtaa ccaccagcgc cgcgcgaccc cacccccgct
     4261 cggggccgct gtcggccccg gctccgcgca atgcgatgga aagatcgagc cgggacattc
     4321 gaaggaccgg caccaggccg gcgaggaagg ccaccagcaa ccccagcatg gcgcctaccg
     4381 ccaggggtcc accaccgaga ccgacgttct ccaaccgggg aactcctgtc ggggcgaagt
     4441 gaaggaaggc cgcgagagcg gagcgagcca cgatgacacc gaggccgatc ccgaccagcg
     4501 caatcaccag actctcgagc agcagggtgc ggaccagtct ggcccgcccg ccgccgacgg
     4561 ccgcctgaat ggcgagctcg cgggcccgcc cgctggcgcg tgccagcatc aggttcgcga
     4621 tgttggcggc cgccacgacc agcaccaacc cggtcgcact caagaacacc agcagcaaca
     4681 ggcgcactgg gcccacgact tcatcgtgca gggtccggac ctcgacaccc cagccttcat
     4741 tgctggccgg aaagtcccgg cccaggtccc gcgcaatccg gcgcaggtcg tcgccagcgg
     4801 cttcaacgct cacgccgggc atcagccggg cataggtgcg gaagcctcgc cagtcgcgct
     4861 gcgaagggtc atccgggcga aacggcaacg gcgcccagag ctggaccgtc tcgaggaggg
     4921 gaacggaagc ggccgggcgc aggaccccca ctaccgtcca ggtcgaatca tccaggacga
     4981 ttcctcggcc cacgatgctg gagtcggctc cgaaggtact ggcccagagc ccatgcgaga
     5041 gcaccgcgac ccgccggccc gccgccagat cctccggctg gatcagcctg cctaacagcg
     5101 gttccagctg gaacacccgg aacagtccgt cgctggcgag gccggccgag agtccgaccg
     5161 gcttgccgtc gcgagtgagc gtgaaccccc agtcccgacc cagcccgaag gccgagaagc
     5221 tcttgcttct ccgctcccaa tcggtggcat tgggcggcga cgccacgcag aactgggcca
     5281 gcgagggatg cagctcacac aacgcgacca gccggtcggg gtcccggtag gggagggaac
     5341 ggagcaggat gccgtcgacc accgccatcg tcgccgtgag cgccccgagg gccagagcca
     5401 gggtgccggc taccgtgagc gagaagccgg gccggcgccg gagcgaacgg atcgccgagc
     5461 gaaggtcgaa ggcccaggct cccagtgcgc cggcggaccc gcgtcgatag gcaccgatca
     5521 atcctcgcca gccccttccc agccgggcga accggtggcc ctggagcgag gtctccaact
     5581 cagccaaaaa ggcgcgcacc gaggactggc gccggacagg gtcgagggcg agtgcccgtt
     5641 cgagaacctg tgcggccgcg tagggcagct ccggcaccag ggcgcgcaca tcgggtggcg
     5701 ccaggtatcg cttcgccagg ctccgggtgg gggtgtcggc cacgaatggt gcccggccac
     5761 tgagcagttc cactgccaca caggccagac tgtagagatc ggctcgacca tcgaccgatg
     5821 acccacccgc ggcctgctcc gggctcacgt agtcgggcgt ccccgctccc ggcggccggg
     5881 ctcgaatcgc cgaccaatcg gcatgaatcg cacgagaaat cccgaaatcc gccagatacg
     5941 catggccctg gtcgagcagg atgttctcgg gcttgatgtc gccgtgcagg atttgatggt
     6001 cgtgggcgta ctgaaccgcc gcgccgatgt cggtaagaag gggcagcact tccctgatcg
     6061 gcaggcggcc tcgagtcgcg agcacctccc ggagggagcc ctcggacatg aagggggtta
     6121 ccagccaggt ccggcccgct gcctcgcctg aatcgtagac cggaaggatg tgggggtgct
     6181 gcagccgcgc cgcgtttcgc agctcggtga ggacctgctg cgtgccggcc gcaccgatgg
     6241 ggttcatcac cttgaccgcc acccggcggc cgtgccggag gtcgcgcgcc aggtagactg
     6301 ttcccatccc gccggccgct atttcgcgtt cgatgaggta ctggtcggtg agggcggacc
     6361 cgacgacggg gtcgatcatg gaggcctccc ttggccctct atgatgcagt ggggggcatg
     6421 aagcagacgt gaaggccggt tactgcccct gccgcagatt cccgcgcagc tgtgagaggt
     6481 tcagaagtgg cgtcccgccc tcggtcggca ccagcactac caggttgttg gactgccgca
     6541 tgtcgtgcag tacctcgagg tactgcttca tcaacgcctc gggggtgagc gtcagattga
     6601 gcagcttctg ctgctccgac tggagccgcg ccacctccac ccggtgccgc tcggtctgga
     6661 tctgctgttc ctgggcgatc ttgttgttga tggcctgaac cacctgggcg ggcggctcca
     6721 ggttccgcag aaagaaggcg gtcaccaccg cgatcttgaa cggctcgccc ccggtgcggg
     6781 gcgtggtgat cagcgcgctg tccacctcgg cctgcatcac ccgcgcgatc tcgttgcggc
     6841 ggcccaggtc gttgatggag aattgcacca tcccgtctcg taccccgttc cggatggcgt
     6901 tgagcaccac cgcgtggatc tgctcctggt tgccgatctc ggtgaaaatg tggggcgcgg
     6961 tcatgggatc gatctgccac cggatcgcga cgtccacctg catacccatc tgctcgctcg
     7021 acagggccgg catctgctcg gcctcggccc cggctgcggg atactgctcc tcccgggtcg
     7081 agtagcgctc cacctgcgac cagggtggca cgaaccggat gcccgagagc agcggccggg
     7141 tcgatacctt cccgaaggcg tgctgtaccc cgacctggcc cgggtcgatc accaccacgc
     7201 tcgaggtgcc gagcgtggcc actccgatga tgatgagcgc cagcgctacc agcccgatca
     7261 gaccgcccga aatccggccc ggcccgcggc gcgccgaccg gacggccagg ccgatgaaga
     7321 tgatgaccag accgagaatc aactttgaca cttgacctcc cagggaggga tgagggggag
     7381 agcgcctcgg gaagaataag tgcggaatgc cgaatgccca gtgcccattg cagaagtgta
     7441 gtgtttacct catccatgac ctctgcaatc ggcattcggc attgggcatt cggcactcac
     7501 gccaacctta tccctctcaa cctcttacca tggtgccaat tgacaacacc ggcctccggt
     7561 gtgtaatact gtctcccttg agcgaagggc gccggcaacc gcgcggccct tcgcttgcgt
     7621 ttttcggctg cacgggcggg cgcgaatgat gacgctgcgg tgcccgagtc accttatgct
     7681 ggagtcgcat ggccaagctg gtcatcgtcg aatcgcctac caaggcccgc accatcaagg
     7741 cattcctgcc ccggggatac caggtggagg cgtccatggg gcacatccgc gacctccccg
     7801 atggcgccaa ggacgtcccc gcgaaataca aaggccagga gtgggcccgc ctgggggtga
     7861 acgtcgaaaa cgacttcgaa ccgctctacg tggtcccggt cgaaaagaag aaggtggtga
     7921 aggagctcaa ggaggcgctc aaggacgccg acgagctgct gctcgccacc gacgaggacc
     7981 gcgagggtga aagcatttcc tggcacctgg tgcaggtgct ctcgccccga atccccgtca
     8041 aacgcatggt cttccacgag atcaccaagg aagccattca ggaggccatc gaggccaccc
     8101 gcgaggtgga cgatcggctg gtgcgggccc aggaaacccg ccggatcctc gatcgtctgg
     8161 tcggctatac cttgtcgccg ttgctctgga agaaaatcgc ctggggtctc tcggccggcc
     8221 gggtgcagtc ggtagcggtg cggctcctgg tgcagcgaga gcgggagcgg cgcgccttcc
     8281 gggccgggac ctggtgggac ctcaaggcca cgctccggca cgagaagcag gccttcgagg
     8341 ccatgctcac ggcgctcgat ggcgtgcggc tcgccaccgg gaaggacttc gacgaagcca
     8401 ccggcaagct cgccagggcc aaggatgtcg tgctgctcga ccaggcgcgg gccgaggcgc
     8461 tgcgcgaccg gctgctcaag gcgccctgga ccgtcacctc ggtcgaggaa aagccccaga
     8521 tccgccggcc ctgggcgccg ttcaccacct ctaccctgca gcaggagtcc aatcgcaaac
     8581 tgcggctctc ggcccgcgag accatgcgaa ccgcgcagag cctgtacgag cgcgggttca
     8641 tcacctacat gcggaccgac tcggtcaacc tttcgaacca ggccatcacg gccgcgcggg
     8701 agtgcatcga ccgactatat ggcaagagct acctggcggc caaaccccgg cactacagca
     8761 gcaagggtgc ccacacccag gaagcccacg aggccattcg gccggccggc tcccacttcc
     8821 gcaccaccga agagaccggc ctgcatggag tcgagcgcga cctgtatgac ctgatctgga
     8881 aacggacggt cgcttcccaa atggccgacg cccggattac cgcgctcgcg gtgttgctcg
     8941 aggcagagaa ggcgcagttc cgcgcggccg gcaagcggat cgactttgcc ggcttcctca
     9001 gggcctacgt ggaagggtca gacgatcccg aggcggcgct cgaggatcag gaagtgctcc
     9061 tgcccgacct ggcggtgggc gatgctccag cctgcgaagc cctcgaagcc gtgtcgcacg
     9121 taacccagcc gcccgcccgc ttcaccgagg ccactctggt caaggagctg gaggccgacg
     9181 gggtggggcg gcccagcacc tacgccagcg tcatcggcac cattctggag cggggctata
     9241 cggtcaagca gggccaggcc ctggtcccga cgttcacggc catcgcggtg acgctgctgc
     9301 tggagaaaca ctttccccat ctggtggaca tcaagttcac ggccaagatg gagcagtcgc
     9361 tcgacgacat cgccgagggc aacgcggagt ggctgcccta tctgcgggag ttctatctcg
     9421 gtgaggaagg cctgcggcat cagaccgagg tcaagaccaa ggacatcgat cccgcggtgg
     9481 cccgcagcgt cgatctcatt gggctggatg ccagtgtgcg gatcgggcgg ttcgggccct
     9541 acatcgaacg caacgacaat ggcgagccgc tccgggtcag ccttcccaac gatattcccc
     9601 cggccgacct gaccggcgag aaaatcgagg cgctgctgcg ggagaagaag gaaggcccgg
     9661 ccgagctggg ccgcgacccc gccaccaggc tgccggtcta tgtccgcacc ggccagtatg
     9721 ggccttacgt gcagctgggc gaagccactg acgagagccc caagcccaag cggatgtcac
     9781 tcccgcgggg cgtcaagccg gaagacgcga cgctggatct ggcgctgggt ctgctctccc
     9841 tgccgcggtt gttaggcgcg catccggaat ccgggggcaa ggtgctggcg gggctgggcc
     9901 ggttcgggcc ctatgtggtg cacgaccagg gtaaggcagg gaaggactac cgctccatca
     9961 ggggcgacga ccacgtcctg acgattacgc tgggtcgcgc gctggaaatg ctggcgcagc
    10021 ccaagctggg ccggggccgc cgggccgaac ccaagccgct gcgggaagtg ggtctccacc
    10081 ccgacgacca gcagccgatc catctcttcg acgggcgcta cggaccatac gtgaagcacg
    10141 gcgacgtcag cgcgtcgatc ccgcgaggcc aggatcctac cacggtgagc ctggatcagg
    10201 cggtggaact gattgcggcg cgagcaggct cgaagcgagt cggccgaaaa gggtcaaaga
    10261 gggcaaaggc gaaagcgacg aagccggtgc agcccgagtc caaggcggtc gagggccgaa
    10321 cgaagtcgaa gaa
//
LOCUS       DASWKS010000349         4249 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1281357, whole genome shotgun sequence.
ACCESSION   DASWKS010000349 DASWKS010000000
VERSION     DASWKS010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4249
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281357"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VGA78_09990"
     CDS             complement(<1..443)
                     /locus_tag="VGA78_09990"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX9894243.1"
                     /translation="MISEAGTVTLGQLQLGLEDRLQEVRDEVRRVIAADFSLISAVNA
                     HLLQMQGKLFRPTIVFLVDEAAGRRATAGTTLAAVVELIHLATLVHDDSVDHSVLRRG
                     MPTINSLFSHQVSVIMGDYLYSRAVIELVRLGAMEPLRVLSRVTN"
     gene            complement(440..2497)
                     /locus_tag="VGA78_09995"
     CDS             complement(440..2497)
                     /locus_tag="VGA78_09995"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894244.1"
                     /translation="MNLDKLKDAARRHELREEWRKAIDIYLRALADLSKAGEPADPSL
                     YNRIGDLELKAGDATAALHAYEQAADTYAEQGFFNNAIALCGKILRVSPNRTATFLRL
                     ADLHARKNVVAESRRNLVEYVERMLAGSHFEHLSGSLRLYSERYCASVEFRGMLVDLL
                     RAAGRTEQARELCGRLISDLGLGEGQVMVGSGMDSERRPKSSSGVGLVFLDTGIDIPE
                     VLAGAAASGEFAIPAEGVRDTDEMGARTVENIPTPSVVPLPYMEPTSIGPYTSTADLE
                     PHVLSGFEPTQVEHEVYFADLDSPLIIEERPDPISVPGLEPLPEFNAPVEGDLGFEPM
                     SLEDNGLISLDPSSTRGPGDELFDELSVDVDPLRLGGSVEELDAALNDAAADERWDDA
                     VQILLRLIRLEPESVPRHQKRVEIAYRSGNRQYLIDAYLSLAQALERIGATENAGLVF
                     QRVLEHDPGNPVAAAGLAALHVPTPAPLQREDPVRPRPLSAPAARPGTPAAPPSAPPA
                     SEFVDLGQLILDKEPEKDTRMRVDQGEPQSQEDVDFRETLEQFKQGVEANLDASDFQA
                     HYDLGIAFKEMGLLDEAIAQFQKALRAPDGRLKSSEALGVSFFEKGRFGIAETVLSRA
                     VDSLAGADDEKIALIYWWGRALEAQQRTGEALRCYERALAVDITFLDLGERIQRLTAE
                     NLK"
     gene            complement(2597..4120)
                     /gene="hutH"
                     /locus_tag="VGA78_10000"
     CDS             complement(2597..4120)
                     /gene="hutH"
                     /locus_tag="VGA78_10000"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEX9894245.1"
                     /translation="MTARLVLDGRSLSLADLVRVTRDGGSRIELHAGALDRLAQSRAS
                     VEAAIARGDTMYGVNTGFGKLANVRIAAADLDRLQENLIRSHSAGVGDPLPRDAVRAM
                     MVLRANVLIRPSSGVRPGLVQALADAINAGLSPLVPEQGSVGASGDLAPLSHLALALM
                     GEGEVLGEDGRPAPAGPALAARGLTPWRYGPKEGLSFINGTQAQTALLALLVHDARVL
                     WRSAIGAAAMSLEALRGTPTPLDPRIHQARPHLGQQAAAALMRRLLAQSEIRESHRDN
                     DPRVQDAYSLRCAPQVLGAVADAIEFAARTLDVELNASTDNPLVFDGEVLSGGNFHGQ
                     PVAQALDFLAIALTTLQALAERRVERLVNPDLSQGLPAFLTPDAGRSSGFMMVQIAAA
                     SIVAESRSLAHPASIGSIPTDANQEDFVPMGMAAAWKARRILTNAQRVVGAEFYCAAQ
                     GLEFLKPLAPGRGVAELHGRIRSMPDPILPWNGDRPPSPDLDRLSRAVAEGTLDPGE"
BASE COUNT          705 a         1441 c         1406 g          697 t
ORIGIN      
        1 tcgttggtca cccggctcaa tacccggagg ggttccatcg cgcctaaccg aaccagctcg
       61 atcacggccc gggagtagag atagtccccc atgatcaccg agacctggtg actgaagagc
      121 gagttgatcg tgggcatgcc ccggcggagc accgaatgat ccaccgagtc gtcgtgcacc
      181 agggtcgcga gatggatcaa ctccaccacg gcggccaggg tggtgcccgc cgtcgcccgc
      241 cggcccgcgg cctcgtccac caggaacacg atggtggggc ggaacagctt cccctgcatc
      301 tggagcaggt gcgcattgac agcgctgatc agggagaaat ccgccgcgat cacccgccgg
      361 acctcgtcgc gcacctcctg cagccggtct tccagcccga gctgcaactg ccccagagtg
      421 acggtgccgg cttcagaaat cacttcaggt tctccgcggt gaggcgctgg atgcgttcgc
      481 ccaagtcgag gaaggtaatg tccaccgcca aggcgcgttc gtagcagcgg agcgcttccc
      541 cggtccgctg ttgcgcctcc agcgcccgcc cccaccagta aatcagcgcg atcttctcgt
      601 catcggcgcc ggccagggag tcgaccgccc ggctgagcac ggtttccgct atgccgaacc
      661 ggcccttctc gaagaatgag acccccaggg cctcactcga tttgagcctc ccgtcggggg
      721 cccgcagggc tttctggaac tgtgcgatgg cttcgtccag gaggcccatc tccttgaacg
      781 cgatgcccag atcgtaatgc gcctggaagt ccgaagcatc caggttggcc tccactccct
      841 gcttgaattg ctccagggtt tcccgaaagt ccacgtcctc ctggctctgg ggctcaccct
      901 ggtcgacccg catccgagtg tccttctcgg gttccttatc gagaatgagc tggcccaaat
      961 ccacgaactc gctcgccggc ggggccgatg ggggggccgc tggggtcccc gggcgcgccg
     1021 ccggagccga aagcggccgc ggccgcaccg gatcctccct ctgcaggggg gccggggtgg
     1081 ggacgtgcag cgccgccagc ccggcggccg cgactggatt gccggggtcg tgctccagca
     1141 cccgctggaa cacgaggccg gcattctcgg tcgccccgat ccgctccagg gcctgggcca
     1201 gcgagagata ggcatcaatg aggtattggc ggttgcccga gcgataggcg atttcgaccc
     1261 gcttctggtg gcgcggtacc gactccggct ccaaccggat gaggcggagc aggatctgca
     1321 cggcgtcgtc ccaccgttcg tcggcggcgg catcgttgag cgccgcatcg agctcttcca
     1381 ccgatccacc cagccggagc ggatcgacgt ccacgctcag ctcgtcgaac agctcgtcac
     1441 ccggcccccg ggtcgaggac ggatccaggg aaatgagccc gttgtcctcc aggctcatcg
     1501 gctcgaagcc gagatctccc tcgactggag cgttgaactc gggcagcggc tccagaccgg
     1561 gcaccgagat cgggtcaggc cgttcctcga tgatgagggg cgaatcgagg tccgcgaagt
     1621 acacttcgtg ttccacctgg gtcggctcga agccgctgag cacgtgcggt tccaggtcgg
     1681 cggtcgatgt gtacggcccg atcgaggtcg gttccatgta gggcagcggc acgaccgaag
     1741 gggtggggat gttctccacc gtcctggctc ccatttcgtc ggtgtccctc accccctcag
     1801 ccggaatcgc gaactcgccc gacgcggcgg ctccggcgag gacctccggg atgtcgattc
     1861 cggtatcgag gaaaaccagc ccgacgccgg aagacgactt gggtcttcgc tccgagtcca
     1921 tgcccgagcc caccatgacc tggccttcac ccagcccgag atcgctgatc agccggccgc
     1981 agagctcgcg ggcctgctcg gtgcgccccg ccgcgcggag caggtccacc agcatccccc
     2041 ggaactccac gctggcgcag tagcgctccg agtacagcct gagcgagccg ctgaggtgct
     2101 cgaagtgcga ccccgccagc atgcgttcga cgtattccac caggtttcgg cgggactcgg
     2161 cgacgacgtt cttgcgagca tgaaggtcgg ccagccgcag aaaggtggcg gtccggttgg
     2221 ggctgactcg gaggatcttg ccacacaagg cgatggcgtt attgaaaaag ccctgttcgg
     2281 cgtaggtgtc ggcggcctgc tcgtaggcgt ggagggcggc ggtagcatca cccgccttca
     2341 gttccagatc accaattcgg ttgtagagtg agggatcggc cggttcacca gccttggaca
     2401 ggtctgccag agcccgaaga tagatatcaa tggccttccg ccattcttcc cgcagttcgt
     2461 ggcgcctggc ggcatctttg agcttatcca gattcatagc gccaaccgct accccgggaa
     2521 gtgggcgaaa accttggcag tctttaagat agacctcgtc acctcaccta gcaagacgat
     2581 ccccgggccc ggcagatcac tctcccgggt ccaaggtccc ctcggccact gcacgcgaaa
     2641 gccggtccag atccggggac ggaggccggt ccccgttcca gggcagaatc gggtccggca
     2701 tggaccggat tcgaccgtgt aactcggcca cgccccgacc cggcgcgagc ggtttgagga
     2761 actccaatcc ctgggcggcg caatagaact cagcccccac cacccgctgg gcattggtga
     2821 gaatccggcg cgccttccac gcggccgcca tccccatcgg tacgaaatct tcctgattgg
     2881 cgtcggtcgg aatcgatccg atcgacgccg ggtgagccag cgagcgcgac tcggcgacaa
     2941 tgctggcggc ggcgatttgc accatcatga agccggaaga acgccccgca tccggggtga
     3001 gaaaggcggg gagcccctgg gatagatcgg ggttgaccag ccgctccacc cggcgttccg
     3061 cgagcgcttg cagggtcgtg agggcgatgg ccagaaagtc gagcgcttgc gccacgggct
     3121 ggccgtggaa gtttcccccc gacagtactt cgccatcgaa caccagggga ttgtcggtcg
     3181 aggcattgag ctcgacatcc agcgtgcggg ccgcgaactc gatggcgtcc gccaccgctc
     3241 ccaggacctg gggagcgcac cggaggctgt aggcgtcctg cacccgggga tcgttatccc
     3301 ggtgcgattc gcggatctcg ctctgggcga gcagtcgccg catcagggcg gcggccgcct
     3361 gttgcccgag gtgaggccgg gcctggtgga tccggggatc gagcggcgtt ggggtaccgc
     3421 gaagggcttc cagactcatg gccgcggctc cgatagccga gcgccagagc acccgggcgt
     3481 cgtggaccag caacgcgagt agcgcggtct gcgcctgggt accgttgatg aaggacagcc
     3541 cttccttggg accgtaacgc cagggcgtga gcccgcgggc ggccagcgcc ggaccggccg
     3601 gggccggccg gccgtcctca cccagcacct caccttctcc catcagcgcc agcgccagat
     3661 gactgagcgg cgccaggtcc ccgctggccc cgacgcttcc ctgctccggc accagcggcg
     3721 acaatccggc gttgatcgcg tcggccagcg cctgcaccag tccggggcgg accccgctgc
     3781 tgggccggat cagcacgttg gcccgcagca ccatcatcgc ccgcaccgca tcgcgcggca
     3841 ggggatcgcc caccccggcc gagtggcttc ggatcaggtt ttcctgcagc cggtccaggt
     3901 cggcggcggc gatccggacg ttggccagct tcccgaagcc ggtgttcacc ccgtacatgg
     3961 tgtcgccccg ggcaatggcc gcctccaccg aggcgcggct ctgcgccagt cgatcgaggg
     4021 caccggcgtg gagctcgatc cggctgccgc cgtcgcgggt gacccgaacc aggtccgcca
     4081 ggctgaggga acggccgtcg agcacgaggc gggcggtcat ggtccccgtc atcgctgaat
     4141 ggtggtctgg ttgtagtcga acttgagatc cggcaggtcg atcaggtgaa tcgagaagta
     4201 gagcgcgaaa ttgccgttgg gattcttcac gaagttgaag ccggcgcgc
//
LOCUS       DASWKS010000350        13453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_172976, whole genome shotgun sequence.
ACCESSION   DASWKS010000350 DASWKS010000000
VERSION     DASWKS010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172976"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2029
                     /locus_tag="VGA78_10005"
     CDS             <1..2029
                     /locus_tag="VGA78_10005"
                     /inference="COORDINATES: protein motif:HMM:NF019229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HEX9894246.1"
                     /translation="PAPNTQGVGARIRVVGGSTPVQEREIAAGGLYLSHSDYLASFAT
                     GSSDSVSIVVNWRDGRRSSLAGARPNRLYEISAETAVPLESGDSNQPGPAIFQDATSD
                     LAGHHHADPPFDDWERQFLLPNALSLLGPGVAWFDLDGDGDEDLLIGSGAGGRLGVFR
                     NDHGRLRPDPNAGPAMPADLTTVLGMAGENDRRLLLGLSNWEARSPEEALSRPAVLEM
                     VVSGGRFGSVGQALLPPRASSTGPMALGDYDRDGDLDLFVGGRAIPGRYPEAASSVLL
                     GNAAGRFAVDSTNSAVLDQVGLVSASLFADIDGDGDVDLLLAREWNSILLLINDGGRF
                     TPASASWGLDRWTSRWNGLAAGDLNGDGRLDLVGTSWGRNTMAQTDSARPLTLVHGPF
                     GIRGKVEMLLARSDPRVEGLAPLNSFQRVRITVPDLVSRIRSFAAYADATVDQILGPA
                     TDQVQRSSIVTLDHMVFLNRGDHFEATALPAEAQFAPAFAAVIADFDGDGREDLFLSQ
                     NFSPTATGLPRYDSGRGLLLLGDGRGGLSAISAARSGLEIYGDQRGAASADFNGDGRL
                     DLAVSQNSGPTRLFLNQGGRPGLRVRLVGPPSNPDAVGTQLRVVFRDGMGPVREVQAG
                     SGYWSQNGAVQVMGLADTPVSLWVRWPDGGESRSAVPNGAREVVVRQQARR"
     gene            complement(2035..2802)
                     /locus_tag="VGA78_10010"
     CDS             complement(2035..2802)
                     /locus_tag="VGA78_10010"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX9894247.1"
                     /translation="MHPVTPLLCLALLSGSGAFLEGQQRSSIVVLVRDRASLDPLAAA
                     RITLTLPAGGDTSAVTDTSGRHAFRRLRPGAYTIKATWKELVSHPATIQLADREEVEV
                     EFTVGPLGPEPTRLPELTVAAPSPHRPFMLQFDERRALGIGQFLTREDLEARSGASLG
                     ELLRPLRGIRVSCRGATCIPYIQRAPAGCAPIFVLDDSEVEPVLAARLRADDIEGIEV
                     YAGLSQVPLELVGDRRQVRCGAIVVWTRRPGLKPPRP"
     gene            complement(2805..3920)
                     /locus_tag="VGA78_10015"
     CDS             complement(2805..3920)
                     /locus_tag="VGA78_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894248.1"
                     /translation="MTTTSVPSLAARVRRPSILSPVLDFLCVGGLSILLLVPLLLSGR
                     SDLLLIGPGAQAWLATLINMPHFMASYRIVYRDREMILRHKWASLYIPALLLLYAAVA
                     LWQAQYSPDLVTIFVAVSSGYLAWHYTGQVWGMMASYSHLEGIRFDPVERWLVRGSLR
                     IMLVWHLTWFIYHNVVAFDFGPVYQAMNIATFGALGLGGVGLMRMRRRTGRLPPVRAL
                     VAWLAIFVWYAALARDPKALFWVQIAHALQYLEFPVRVEINRSVRQAAGRVAGRMAMY
                     AAVLLGISVLMGLVVPRTAMDVIGATLGEHPAQVAPILILSFINVHHYFTDGVIWKIS
                     NPAVRRELFAHITPPEPVPEPARTGERKRKKAKSRKR"
     gene            complement(4027..4392)
                     /gene="rplS"
                     /locus_tag="VGA78_10020"
     CDS             complement(4027..4392)
                     /gene="rplS"
                     /locus_tag="VGA78_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010334229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEX9894249.1"
                     /translation="MTKLADLEREGLRTDIPAFSPGDTIRVMVRVREGDKERLQAFEG
                     ICVARRGGGISETFTVRKMSAGVGVERIFPLQGPTVAAVEMVRRGRVRRAKLYYLRRL
                     SGKAARIREKRDTGPKEAK"
     gene            complement(4439..5125)
                     /gene="trmD"
                     /locus_tag="VGA78_10025"
     CDS             complement(4439..5125)
                     /gene="trmD"
                     /locus_tag="VGA78_10025"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: protein motif:HMM:TIGR00088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX9894250.1"
                     /translation="MRINVVTLFPEALAPYLAASIPGRAAQAGLVEYRLIQLREFTRD
                     RHATVDDYPYGGGAGMVMKPEPFFEAVESLQPTGPVLLMSARGRRFEHDDAVRLGLQP
                     RFTILCGHYKDVDQRVSEGLGAEEISLGDFVLSGGEPAALCVIDAVVRLLPGALGDHE
                     SASSDSHYEGLLSPPSYTRPPEYRGLAVPEVLRTGNHAAIEAWRRAEAERLTRERRPD
                     LWAKQTVGER"
     gene            complement(5137..5664)
                     /gene="rimM"
                     /locus_tag="VGA78_10030"
     CDS             complement(5137..5664)
                     /gene="rimM"
                     /locus_tag="VGA78_10030"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX9894251.1"
                     /translation="MSSRRLVIARLRKPHGLRGDVAVFPLTDQPDQALAPGRSVWVVD
                     LAGEVVVGPLEIARSRGYHREWLLTFRGRGSRGDVEGLAGSFLAADAESLAPPQGDEV
                     YLDELPGFAVEDTTGRSLGLVTAWYELPAGLTLEVQGPKREFLMPYKKDLVKRVDREQ
                     RKLVVELPAGLEEGF"
     gene            complement(5661..5915)
                     /gene="rpsP"
                     /locus_tag="VGA78_10035"
     CDS             complement(5661..5915)
                     /gene="rpsP"
                     /locus_tag="VGA78_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX9894252.1"
                     /translation="MATRIRLRRVGRKKVPLYRIVIAERTDPRDGRFIEVIGTYDPKA
                     QGSKKVQLDTEKAKVWLARGATPTETVESLLKQAGVIAAA"
     gene            complement(5954..7333)
                     /gene="ffh"
                     /locus_tag="VGA78_10040"
     CDS             complement(5954..7333)
                     /gene="ffh"
                     /locus_tag="VGA78_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX9894253.1"
                     /translation="MFEDLSSRLSEALRRLSGKGVLNEDDVRDGLREIRRILLEADVS
                     FDLTRQFLERVQRKATGQEVLQAVKPGHQLVKIVYDELVAMLGEKQAPLGFASVPPTV
                     ILLVGLQGSGKTTTAGKLAKRLKLEQKAPFLVAADVYRPAAVDQLLTLAEQVGVGAYS
                     ETDRRTDGPTAGPPVRPSAGPPDVVGLVRRGIEAAGKARARTVLVDTAGRLQIDDAMM
                     TELRRLKEAVKPHEILLVADGMTGQDAVRIAQGFHDALGITGVILTKMDGDARGGAAL
                     SIYGVTHAPIKYVGVGEKLDALEPFHPERLAGRILQQGDILTLVEKAQQTVDTKEAEK
                     IAKKAVSKKGLDLEDFLSAMRQMQKLGPLKNVLGMLPGVNPAMLKAANVDDQRLKHVE
                     AIVLSMTRKERADPDILNGSRRLRIARGSGRSVQEVNQLVAQFNQMKKLMKGGGLPGM
                     KLPFGKFPA"
     gene            7490..9049
                     /locus_tag="VGA78_10045"
     CDS             7490..9049
                     /locus_tag="VGA78_10045"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HEX9894254.1"
                     /translation="MDRQTILTGIATVLVGAISGGITNAIAIWMLFRPHEPRRLFFIM
                     FHGAIPKNKPRLARTIGKTVGERLLTPEDVASRLSTPQVREAFAESMTRVIDDLLDRE
                     HGSLREMLPSQAAGVAEGIVGDIGPRVADHLARFTETPAFTEMIGRWMERLRRDVGDR
                     PVRDLLTPANREALVTRIDSWMTDAAEGHELEHTLRSWVAHQLEVLAQDPRPLVDRLP
                     AGLLAPVEQAIDDYLPTAIDRVSGLLSDPETRATVSAALRKAFDGAARQLLLHERILA
                     KLVVNEQTFDRLLDGIERNGFERFASAITAPAVRSRLANALHQAFVGLLRMPLGERLA
                     RLGPERRAALIQTLGDWLVTAARSPSTRASVQRALERGIDAAGNRTWGEALALVPDER
                     VAALIAEALRGESGQAWVADTVSRSASRLLDLPIGRPADWLGPATAAAVRQGITNGAW
                     SWVQSQVPRVVEKLNVPEMVEQKVLGFSTQRMEEIVRTVTERELKLIVRLGYVLGALV
                     GILAFALNQLL"
     gene            complement(9264..10439)
                     /locus_tag="VGA78_10050"
     CDS             complement(9264..10439)
                     /locus_tag="VGA78_10050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894255.1"
                     /translation="MLFAAVTFLGCRGEPPRAASEFDLAHLVDSLRPAVEAAVGLKFQ
                     ETPRSALVSRDDVRRYILARLDKEFPHSRREGVQSAYRLFGLLPDTLDLEALLVELYT
                     EQVAGYYDPETRTLYGVAGSTGVSQNLVLAHELVHALQHQYLPLDSLMQAKGDGDRVA
                     ATQAVLEGHATLASIAMVAPGSDVVASDEFWESYRDQVRVGQQSMPVFARAPLVLREA
                     LIFPYVGGAEFMRWWKTTRRTPLPLRTELPLSTEQVLHPGRYPADGPVALRFADSSAE
                     VLFEETLGELETDILLATFRGAAQVGYEVPLGWGGDRYRVIRSPDGPALVWYSVWDSE
                     AQRARFLRSAAEGFRGIQRAGYRVEAAAVSAGGRPGIRIVHAPAAWAGWARLPALAR"
     gene            complement(10597..11403)
                     /locus_tag="VGA78_10055"
     CDS             complement(10597..11403)
                     /locus_tag="VGA78_10055"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX9894256.1"
                     /translation="MTPDLLLAILGGLFGLLTGSFLNVCIVRLPRDESVVRPRSRCPR
                     CGRMIEWYDNIPVISWLLLRGRCRGCGEPISVMYPLVELANAVIWAWMAWRFGPTLET
                     VRGGVFGTLLLGIALTDAREYIIPDEFSVGGLVLGLGFALAGGWPGLRSALIGAAVGF
                     ALLWVFGAVGTWIGKRMGMVGGEGQPDEAMGGGDIKMMAMIGAFLGWPGVFLTVFLGA
                     VTGSLIYVPLNLSGRKVLVPFGIFLALGAAITFVAGDWLTDLYFRFISAS"
     gene            complement(11393..12160)
                     /locus_tag="VGA78_10060"
     CDS             complement(11393..12160)
                     /locus_tag="VGA78_10060"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX9894257.1"
                     /translation="MQSLDSLIRHLRLRRGRERRGLALAEGVRLVEEVLAARVPVRAA
                     LVAPGLEATPRGAALAAELRRRVERVESISDRALAELAATDHPQGVVAVIEPPQWSFE
                     RIVVEPRTVVLVLDAVQDPGNVGTIIRSAWALGAAGVIALPGTAELTNPKVLRATMGA
                     AFRLPSLAAAAEPTLDWCAAHRLELWVAAPDGAAVHTVDRSGPVALVVGNEGAGVGPQ
                     LSAAAGRRVAIPQRPGAESLNVGVAAGILLYEALRDS"
     gene            12164..12985
                     /gene="thiD"
                     /locus_tag="VGA78_10065"
     CDS             12164..12985
                     /gene="thiD"
                     /locus_tag="VGA78_10065"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX9894258.1"
                     /translation="MKIALTVAGSDSGGGAGIQADLKTFHQFGVYGTSAIVAVTAQNT
                     VGVRAVHAVPAAMVEAQLDAIAEDLPPDAFKTGMLATAALARQVAQAVQRYRWANYVL
                     DPVMIATSGDRLLSPDAEAVVRDQLVPLAAVVTPNLGEASILTGTLVDDPAGMARAGI
                     RLVEMGAGAALIKGGHSPGDLLVDLLVTRSGTRRFEHPRIVTRSTHGTGCTLSAAITA
                     GLALGLPLETATETGLDYLQRAIAAAPGLGTGHGPVDHTVAVMIPSISRATRSPA"
     gene            complement(12928..>13453)
                     /locus_tag="VGA78_10070"
     CDS             complement(12928..>13453)
                     /locus_tag="VGA78_10070"
                     /inference="COORDINATES: protein motif:HMM:TIGR01697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEX9894259.1"
                     /translation="VFATLGVRILILTNAAGGIRQTFAPGTVMLIRDHINLTGRSPLT
                     GAVLPGEQRFPDMSVAYDVKLRRLAHEVAETIGSPLEDGVYACLPGPSYETPAEIHFL
                     EQVGVDAVGMSTVMEVIAARSRRMKVLGLSTITNLAAGKLVGKLSHAEVMEVAAHAGD
                     RVARLIEGIITATV"
BASE COUNT         2193 a         4729 c         4463 g         2068 t
ORIGIN      
        1 cccggcgccg aatacccagg gggtcggcgc gagaatccgg gtggtgggcg gtagcacgcc
       61 cgtgcaggag cgggagatcg cggcgggggg gctctacctg tcgcacagcg actacctggc
      121 cagctttgcg accggctcgt cggactccgt gagcatcgtg gtgaactggc gcgacggccg
      181 ccggagttcc ctcgccggcg ccaggcccaa ccggctgtac gagatctcgg cggagacggc
      241 ggtcccgctc gagtccggcg attcgaacca accgggaccg gccatctttc aggacgcgac
      301 ttccgatctt gcaggacacc accacgccga cccgccattc gacgattggg agcgccagtt
      361 cctgctgccg aacgctcttt cgctgctcgg ccccggcgtg gcctggttcg acttggacgg
      421 cgacggtgat gaggatctgc ttatcgggag cggcgccggt ggccggttgg gcgtgttccg
      481 gaacgatcac gggcgactgc gaccggaccc gaatgccgga cccgccatgc ccgccgacct
      541 gaccaccgtc ctcggaatgg caggcgaaaa cgaccggcgg ctgctgctgg gcctctccaa
      601 ctgggaggcc cgctcacctg aggaggccct gtctcggcct gccgtgctcg aaatggtcgt
      661 ttccggcggg cgattcggct cggtagggca agccctcctg ccacctcggg catcgagcac
      721 cggcccgatg gcgctggggg actacgaccg ggacggcgac ctggacctgt tcgtgggcgg
      781 gcgagccatt cccggacgat atcccgaggc ggcctcctcg gtgttgctgg ggaatgcggc
      841 cggccgcttc gcggtggact cgaccaacag cgcggttctg gatcaggtcg gactggtttc
      901 cgcctccctc ttcgccgata tcgacggcga cggcgatgtg gatctcctcc tggcccgcga
      961 atggaactcc atcctgctgc tgatcaacga cggggggaga ttcacgccgg catccgcatc
     1021 ctggggactg gaccggtgga ccagccggtg gaacgggctg gcggccggcg atctgaatgg
     1081 agacggccgc ctggacctgg tcgggaccag ctggggcaga aacaccatgg cccagacgga
     1141 cagcgcccgt ccgctcaccc tggtccacgg cccgttcggg atccggggaa aagtggaaat
     1201 gctgctggcc cggtccgacc ccagggtgga aggcctggcc ccgctcaaca gcttccagcg
     1261 ggtccggatc accgtgcccg acctggtgag ccggatccgc agctttgcgg cctacgccga
     1321 cgccacggtg gaccagatcc tgggccccgc gaccgaccag gtccagcgct ccagcatcgt
     1381 caccctggac catatggtgt tcctgaatcg gggtgaccat ttcgaagcga cggcgctccc
     1441 agcagaagcc cagttcgcgc cggccttcgc ggcggtcatc gccgatttcg acggggacgg
     1501 tcgggaagac ctgtttctca gccagaactt ctctcccacc gctaccggcc tgccccggta
     1561 cgacagcggg cgcggcctgc tcctcctcgg cgatggacgg ggtggcttgt cagccatctc
     1621 cgcggcgcgg tcggggctgg agatctacgg agaccagcgc ggggccgcgt ccgccgactt
     1681 caacggcgat ggccgtctgg acctggcggt ctcgcagaac tcgggtccga cccggctctt
     1741 cttgaaccag ggcgggcggc cgggactgag ggtccgactg gtgggaccgc cgtccaaccc
     1801 cgatgcggtc ggcacccagc tgagagtcgt atttcgtgat ggcatggggc cggtccgcga
     1861 agtccaggcg ggctccggat actggtccca gaacggggcg gtgcaggtca tggggctggc
     1921 cgacacgccg gtctcgctct gggtccgctg gccggacggc ggcgagagcc gatcggccgt
     1981 gcctaacggc gcccgtgagg ttgtggtgcg acagcaggcc cgccggtagg agaatcaggg
     2041 ccgaggcggc ttcagtcccg gacggcgggt ccagacgacg atcgccccgc agcggacctg
     2101 ccggcgatcc ccgaccaact ccagcggcac ctgggagagc ccggcgtata cctcgattcc
     2161 ctcgatgtcg tccgcccgga gccgggcggc gaggaccggc tcgacttccg agtcgtccag
     2221 aacgaagatc ggggcgcaac cggccggtgc ccgttggatg taggggatgc aggtggcgcc
     2281 gcgacagctc acgcgaattc cccgcagcgg gcgcagcagc tcgcccaggg aggcgccgct
     2341 ccgcgcctcg aggtcttccc gggtcagaaa ctgcccgata cccagcgccc gacgttcgtc
     2401 gaactggagc atgaagggtc ggtgggggct cggggcggcc accgtcagct cggggagccg
     2461 ggtcggctcc ggccccagcg gaccgaccgt gaactccacc tcgacttcct cccggtcggc
     2521 cagctgaatc gtggcgggat gggaaaccag ctctttccag gtcgccttga tggtgtaggc
     2581 tccgggacgg agacgccgga aggcatgccg gccgctggta tcggtgacgg cgctggtgtc
     2641 gcccccggcc ggaagggtca gagtgatccg ggccgcggcc agcgggtcca gggacgcgcg
     2701 gtcccggacc agcacgacga tgctcgatcg ctgctgcccc tcgagaaagg cgccgcttcc
     2761 cgagagcagc gccaggcaca ggagcggggt gaccgggtgc atgcctaacg cttcctcgac
     2821 ttggcctttt tgcgcttccg ttcacccgtc cgggccggct caggaaccgg ctcgggcggc
     2881 gtgatgtggg caaacaattc gcggcggacc gccgggttac tgatcttcca gatgacgccg
     2941 tccgtgaagt agtggtggac gttgatgaac gacaggatca ggatgggcgc cacctgggcc
     3001 gggtgctcgc ccagagtcgc gccgatcaca tccatcgcgg tgcggggcac gaccagcccc
     3061 atcagcacgc tgatgcccag caacaccgcc gcgtacatcg ccatccgccc ggccacccga
     3121 cccgcggcct gtcggacact gcggttgatc tccacccgca ccgggaactc caggtactgg
     3181 agcgcgtgcg cgatctggac ccagaagagg gccttgggat cacgcgccag cgcggcatac
     3241 cagacgaaga tcgccagcca tgccaccaga gcccggaccg ggggcagccg gccggtgcgc
     3301 cgccgcatcc gcatcagccc caccccgccc aaccccagcg cgccgaacgt cgcgatgttc
     3361 atcgcctgat acacgggacc gaagtcgaac gccaccacgt tgtgatagat gaaccaggtg
     3421 aggtgccaca ccagcatgat ccggaggctg ccccgcacca gccaccgttc gaccgggtcg
     3481 aagcggatcc cttccaggtg ggagtacgac gccatcatgc cccagacctg gccggtgtag
     3541 tgccacgcca ggtacccgct cgagaccgcc acgaagatgg tgaccaggtc gggtgagtac
     3601 tgggcctgcc acaaggcgac ggcggcgtag agcaggagca gtgccgggat gtagagcgaa
     3661 gcccacttgt gccgcagaat catctcgcga tcgcgataga cgatccggta cgaggccatg
     3721 aagtgcggca tgttgatcag cgtcgccagc caggcctggg ccccgggccc gatcagcagc
     3781 aggtcgctcc gcccgctcag gagcaggggg accagcagga ggatcgacag cccgccgacg
     3841 cagagaaaat cgaggacggg agaaaggatc gaggggcgcc gcactcgggc ggcgagggat
     3901 gggactgatg tggtcgtcat ggcttcacgc cggtcgcaaa agtcggaagc gacgtaaggg
     3961 tcgaaaccct atcggtcccc tacgaccttt ccgccttttc cgactttccg acggtaccga
     4021 aggaagctac ttcgcttcct tcggtccggt gtcccgcttc tcgcggatcc gggccgcttt
     4081 gccggagagg cgccgcagat agtagagctt ggcgcgccgc acccggcccc gccgaaccat
     4141 ctccaccgcg gccaccgtgg ggccctgaag cggaaagatc cgctccaccc caacgccggc
     4201 ggacatcttc cggaccgtga aggtctcgct gatcccgccg ccgcggcggg ccacgcaaat
     4261 gccttcgaac gcctgcaaac gttccttgtc cccttcccgc acccgcacca tcacccggat
     4321 cgtgtcgccg ggcgaaaacg ccggaatatc ggtgcgcaag ccctcgcgct cgaggtcggc
     4381 cagctttgtc atgtcacctt cctccaccgt tcaccgttca ccgttcaccg ttcactgttc
     4441 accgttcgcc gaccgtctgt ttcgcccaca agtcggggcg ccgttcccgg gtcaaccgtt
     4501 ccgcttcggc ccggcgccac gcttcgatgg ccgcgtggtt gccggtgcgc agcacctccg
     4561 gcaccgccag gccccgatac tcgggcggcc gggtgtagct gggcgggctc agcagcccct
     4621 cgtagtgcga gtccgagctg gccgactcgt gatcgcccaa ggctcccggc aacaaccgca
     4681 ccaccgcgtc gatgacgcat aaggccgccg gttccccacc cgaaagcacg aagtcgccca
     4741 gcgagatctc ctcggccccg agcccctcgg acacccgctg gtccacgtcc ttgtagtgcc
     4801 cgcacaggat cgtaaaccgc ggttgcagcc ccagccggac ggcgtcgtcg tgttcgaagc
     4861 gccgtccccg ggccgacatc aggagcaccg gcccggtggg ctggagcgac tcgaccgcct
     4921 cgaagaacgg ctccggcttc atcaccatcc cggcgccgcc gccatacggg taatcgtcca
     4981 ccgtggcatg ccggtcccgg gtgaactcgc gcaactgaat caaccggtac tccaccaggc
     5041 ccgcctgagc cgcccgaccc ggaatgctcg cagcgagata gggcgcgagc gcctccggga
     5101 acaacgtgac cacattgatc cgcaaacggg ggtccttcag aacccctcct ccagccccgc
     5161 cggcaactcg accaccagct tgcgctgctc ccggtccacc cgcttcacca ggtccttctt
     5221 gtacggcatc aggaactcac gcttggggcc ctgtacttcc agcgtcagcc cggccggcag
     5281 ttcgtaccac gcggtcacca gtcccaacga tcgccccgtg gtgtcttcga ccgcaaagcc
     5341 gggcagctcg tcgagataca cttcgtcccc ttggggcggc gccagcgact cggcgtcggc
     5401 ggcgagaaag cttcccgcca gcccttcgac atcgccccgg gagcctcgcc cgcgaaacgt
     5461 cagcagccat tcccggtgat agccgcggga gcgcgcgatc tcgagcggcc ccaccacgac
     5521 ttcaccggcc agatccacca cccacacgct ccggcccggg gcgagcgcct ggtcgggctg
     5581 gtcggtgagc gggaagaccg cgacatcacc ccggagaccg tgcggtttcc tgagccgcgc
     5641 gatcaccagg cggcgagagc tcaagccgcg gcgatgacgc cggcctgctt gagcagcgac
     5701 tcgaccgttt cggtcggggt cgcaccccgg gccagccaca ccttggcctt ctcggtgtcg
     5761 agctggacct tcttgctgcc ctgcgctttg gggtcgtagg tgccgatcac ctcgatgaac
     5821 cgaccgtcgc gcgggtcggt ccgctcggcg atgacgatgc ggtagagcgg taccttcttg
     5881 cgacccaccc ggcggagccg gattctcgtt gccatgtgta cctcgaaaac ggtcagcttg
     5941 cagtcgtcag cgatcaggcc gggaacttgc cgaaggggag cttcatgccc ggcagtcccc
     6001 cgcccttcat caacttcttc atctggttga actgcgccac cagctggttg acttcctgga
     6061 ccgaacgtcc ggagcccctg gcgatccgga gccgccgcga cccgttcaga atatcgggat
     6121 cggcccgttc cttccgggtc atgctcagca cgatggcttc cacgtgcttg aggcgctggt
     6181 cgtcgacgtt ggccgccttg agcatggcgg ggttcacccc cggcagcatg ccaagcacat
     6241 tcttgagcgg ccccagcttc tgcatctggc gcatggcgct caggaaatcc tcgaggtcga
     6301 gccctttctt ggagaccgcc tttttcgcga tcttctcggc ttccttggta tcgaccgtct
     6361 gttgcgcctt ctccaccagg gtcaggatgt cgccctgctg caggatccgg ccggccagcc
     6421 gctccgggtg aaatggctcc agcgcgtcca gcttctctcc cacgcccacg tatttgatgg
     6481 gcgcgtgagt aaccccgtag atcgagaggg ccgcgccgcc ccgggcgtcc ccgtccatct
     6541 tggtgaggat caccccggtg atgccgaggg cgtcgtgaaa tccctgggcg atccggaccg
     6601 cgtcctgccc ggtcatgccg tcggcgacca ggagaatctc gtggggcttg accgcctcct
     6661 tgagacggcg gagctcggtc atcatcgcgt cgtcgatctg cagccggccg gcggtatcga
     6721 ccagcaccgt gcgggcccgg gccttcccgg ccgcttcgat gccacgtcgt accagaccca
     6781 cgacgtcggg gggaccggcg gacgggcgga cgggcggacc ggccgtcggt ccgtcggtcc
     6841 gtcggtccgt ctccgaatac gccccgacac ccacctgctc cgccagggtc agcaactggt
     6901 ccacggcggc cggtcgatac acgtcggcgg ccaccaggaa cggcgccttc tgctccagtt
     6961 tgagccgttt tgcgagcttg cccgccgtgg tggtctttcc cgagccctgc aaccccacca
     7021 gcagaatcac cgtcggaggg acggacgcga acccgagcgg cgcctgcttc tcgcccagca
     7081 tggccaccaa ctcgtcatac acgatcttga ccagctggtg tcccggcttg accgcctgca
     7141 gcacctcctg gccggtggcc ttccgctgta cccgctccag gaactgacgg gtcaggtcga
     7201 agctgacatc ggcctcgagg aggatacgac ggatctcccg gagaccatcc ctgacatcgt
     7261 cctcgttgag cacgcccttg ccggagagcc ggcgcagagc ttcggaaagc cgggacgata
     7321 gatcttcgaa cataagccct taaagctaga tcacttagcg ggctttctca agcccgcagt
     7381 cgaaggtggt cgaagacggt cgaagacggt cgaaagtggg tcccccaccc caccaccgct
     7441 tcgaccacct tcgaccgtct tcgaccacct tcgactagtt ttttgttcca tggaccgaca
     7501 gacgattctg accgggatcg ccaccgtgct ggtcggcgcg atctccggcg ggatcaccaa
     7561 cgccatcgcg atctggatgc tgttccggcc ccatgaaccg cgacggctct tcttcatcat
     7621 gttccacggg gccatcccca agaacaagcc ccgtctggcc cggaccatcg ggaagacggt
     7681 aggggaacgg ctgctgaccc ccgaggacgt ggcctcccgt ctcagcaccc cgcaggttcg
     7741 cgaggccttc gccgagtcga tgacccgcgt gatcgacgat ctgctggatc gggagcacgg
     7801 atccctgcgg gagatgctcc cgtcccaggc ggcgggcgtg gccgaaggaa ttgtcgggga
     7861 tatcggaccg cgggtggccg atcacctggc ccggttcacc gagacgccgg cgttcaccga
     7921 gatgatcgga cgctggatgg agcggctgcg gcgggacgtc ggggaccggc cggtgcgcga
     7981 tctgctgacg ccggcaaacc gcgaggcgct ggtcacccgg atcgactcct ggatgaccga
     8041 tgccgcggag ggccacgagc tggagcacac tctgcgcagc tgggtggcgc atcagctcga
     8101 ggtgctggcg caggatcccc ggcccctggt cgaccggctc ccggccggcc tgctggctcc
     8161 ggtagagcag gcgatcgacg actacctgcc caccgcgatc gaccgggttt ccgggttgct
     8221 gagcgatccc gaaactcgcg ccacggtatc ggccgccttg cggaaagcgt tcgacggcgc
     8281 cgcccgccag ctgctgctgc acgagcgcat cctcgccaag ctggtggtga acgaacagac
     8341 cttcgaccgg ctgttggacg gcatcgaacg caacggcttc gagcggttcg cctccgccat
     8401 caccgcgccg gcggtgcgca gccggctggc caacgcgctg catcaggcct tcgtgggact
     8461 gctccggatg ccgctggggg agcggttggc ccgcctgggc ccggaacggc gggccgccct
     8521 gatccagacc ctgggcgact ggctggtgac ggccgcccgg agtccctcga ctcgcgcctc
     8581 ggtccagcgg gccctggagc gcggcatcga cgccgccggc aaccgcacct ggggcgaggc
     8641 gctcgccctg gtgccggatg aacgggtggc ggccttgatc gccgaagcgc ttcgaggtga
     8701 atcggggcag gcctgggtcg ccgatacggt gtcccgctcc gccagccggc tgctcgatct
     8761 gccgatcggc cgaccggccg actggctggg tccggccacc gcggccgcgg tgcggcaggg
     8821 aatcaccaac ggggcctgga gttgggtgca gagccaggtc ccgcgggtgg tcgagaagct
     8881 caacgtgccc gagatggtgg agcagaaagt gctgggtttc tcgactcagc ggatggaaga
     8941 gatcgttcgc accgtcaccg agcgggagct caagctgatc gtgcggctgg gttacgtgtt
     9001 aggcgcgctg gtgggaatcc tggcgttcgc cttgaaccag ctcctgtgag tctcgacgat
     9061 ccttcgcggc gctcggttga ggcgttcctg gttccgggtt ccaggtaccg ggtgcggtgc
     9121 tgagtgcggt gcttggtgcc gcgggcccgg tgcgctccat cgcgagcacc cggcaccgaa
     9181 tccggcactt ggcaccgaac gctgcaccgc acgcgggacc cggaacgcgg aacccggaac
     9241 aggtttgttg cgtcgtcagg tattcaccgc gccaacgccg gcagcctggc ccagccggcc
     9301 caggccgccg gggcgtgaac gatgcggatc cccggtctcc cccccgcgga cacggcggcg
     9361 gcctccaccc ggtacccggc ccgttggatc ccgcgaaagc cctctgccgc actccgcagg
     9421 aagcgcgccc gctgcgcctc gctatcccac accgaatacc acaccagagc cggtccatcg
     9481 ggtgaccgga tgacccgata gcggtctccc ccccagccca ggggcacctc gtagccgacc
     9541 tgggccgccc cccggaacgt ggcgagcaga atgtccgtct ccagctcgcc cagggtctcc
     9601 tcgaagagca cctccgccga tgaatccgcg aaccggagcg ccaccgggcc gtcggccgga
     9661 tagcggcccg gatggagcac ctgctcggtg gacagcggca gctcggtccg gagtggcagc
     9721 ggcgtccggc gggtcgtttt ccaccagcgc atgaactcgg cccctcccac ataggggaag
     9781 atcagcgcct cgcgcagcac cagcggcgcc cgggcgaaga ccggcatgct ctgttgcccg
     9841 acgcggacct ggtcgcgata ggactcccag aactcatcgg aggcgaccac gtcgctgcct
     9901 ggggcgacca tcgcgatcga ggcgagggtg gcgtgacctt cgagcacggc ctgggtcgcg
     9961 gcgacccggt cgccatctcc cttggcctgc atcagcgaat cgagcggcag gtactggtgt
    10021 tgcagggcgt gaaccagctc gtgggccaac accaggttct gcgagacccc ggtactgccg
    10081 gccacgccgt agagggtacg ggtctcggga tcgtagtagc cggcgacctg ctcggtgtag
    10141 agctccacca gcagggcctc gagatcgagg gtgtcgggca gcaaaccgaa caatcggtag
    10201 gcggactgca ccccttcgcg gcggctgtgg gggaattcct tgtccagccg cgccaggata
    10261 taccggcgga catcgtccct ggaaaccagg gccgaacggg gggtctcctg aaatttcaga
    10321 ccgaccgcgg cttccaccgc cgggcgaagg ctgtccacca ggtgggcgag gtcaaactca
    10381 ctcgcggcgc gcgggggctc accccggcag cccaggaagg ttacggcagc aaaaagcatc
    10441 cacggattac gcggatgaca gggatgagaa ggacgacagc gacgcatggg accagagtgg
    10501 ttcatttcgg ttggggaaag caattcgggt atggttcggc gtgcaatccg tgaaatccgt
    10561 gtcatccgtg gattgcggtt tcttcggcga gtggagtcag gaggcgctga taaaccggaa
    10621 gtagagatcc gtcagccaat cacccgcgac aaaggtgatg gcggcgccta acgcgaggaa
    10681 gatcccgaag ggcaccagga ccttccggcc gctcaggttg agcgggacgt agatcagcga
    10741 gccggtgacg gcgcccagaa agaccgtgag aaacacgccg ggccagccca gaaacgcgcc
    10801 gatcatcgcc atcatcttga tatcgccgcc gcccatggcc tcgtcgggct gcccttcccc
    10861 gcccaccatg cccatccgct tgccaatcca ggttcccacg gccccgaaga cccagagcag
    10921 cgcgaatccc accgcggcgc cgatcagcgc gctccggagg ccgggccatc cgccggccag
    10981 ggcgaaaccc aatcccagca ccagaccgcc caccgagaac tcatcgggga tgatgtactc
    11041 gcgcgcatcc gtcagcgcga tgccgaggag cagggtgccg aagaccccgc cccgtaccgt
    11101 ttcgagcgtg ggcccgaacc gccaggccat ccaggcccag atcacggcgt tggccagctc
    11161 caccagggga tacatcacac tgatgggctc gccgcagccc cggcatcgac cccgcagcag
    11221 cagccaggag atcaccggaa tgttgtcgta ccactcgatc atccggccgc atcgagggca
    11281 acgcgagcgg ggccgcacca ccgattcgtc gcgcggcagc cggacgatgc acacgttcag
    11341 gaaactgccg gtcagcagtc cgaagagacc gcccaggatc gcgagcagca ggtcaggagt
    11401 cacggagcgc ctcgtaaagc aagattccgg ccgcgactcc aacgttgagc gactcggctc
    11461 cgggccgctg ggggatggcc acccgccggc cggcggcggc cgaaagctgc ggtcccacgc
    11521 ccgccccctc gttgcccacc accagggcca cgggtccgga acggtcgacg gtgtgcaccg
    11581 ccgctccgtc gggggctgcc acccagagct ccagccggtg tgcggcgcac cagtcgaggg
    11641 tcggctcggc cgcggcggcg agtgaaggca ggcggaatgc agcccccatc gtggcgcgca
    11701 gcaccttggg attggtcagc tccgcggtcc cgggcagcgc gatcacgccg gccgccccca
    11761 gggcccaggc cgagcggatg atggtgccca cgttgccggg gtcctgcacc gcgtccagca
    11821 ccagcaccac ggtccggggt tcgacgacga tgcgttcgaa actccattgc ggcggctcga
    11881 tgacggcgac cacaccctgg ggatgatccg tggcggcgag ctccgccaga gcgcgatcgc
    11941 tgatcgactc cacccgctcc actcgccgcc gcagctccgc tgccagcgcc gcgccgcggg
    12001 gtgtagcttc cagccccggc gccaccagcg cggcgcggac cggcacccgg gcggcgagga
    12061 cttcttccac cagccgcacc ccttccgcca gcgcgagccc gcgccgttcc cggccccggc
    12121 gcagacggag atgacggatc aggctgtcga gagactgcat cggatgaaga tcgccctcac
    12181 ggttgcgggc tcggattccg gcggtggcgc cggaatccag gccgatctca agaccttcca
    12241 ccagttcggg gtctacggca cctctgccat cgtcgcggtg acggcgcaga atacggtcgg
    12301 cgtgcgcgcg gtccacgccg tccccgccgc catggtcgag gcccagttgg acgccatcgc
    12361 cgaagacctg ccgcctgacg cattcaagac cggcatgctg gcgaccgccg cgctggcccg
    12421 tcaggtggct caggcggtcc aacgctaccg ctgggccaac tacgtgctcg acccggtcat
    12481 gatcgcgacc tcgggcgatc ggctcctgtc gcctgacgcg gaagcggtag tccgagacca
    12541 gctggtgccg ctcgccgcgg tggtgacgcc gaacctgggc gaggcgtcga ttctcaccgg
    12601 tacgctggtg gacgatcccg cgggcatggc ccgcgccggc atccgtctgg tggagatggg
    12661 agcgggagcc gccctgatca agggcgggca ttcgccgggc gacctgctgg tcgacctgct
    12721 ggtgacccgg agcggtaccc ggcgcttcga gcacccccgg atcgtcaccc ggtccaccca
    12781 cggcaccggc tgcaccctct cggcggccat cacggccggc ctggcgctgg gacttcccct
    12841 ggaaacggcg accgaaaccg ggctcgatta tctgcagcgg gcgatcgccg ccgcgccggg
    12901 gctcggcacc ggtcacggcc cggtggatca cacggtcgcc gtaatgatcc cctcgatcag
    12961 ccgcgccacc cggtcccctg cgtgagcagc cacttccatc acttcggcgt gggaaagctt
    13021 cccgaccagc tttcccgccg ccaggttggt gatggtggag aggcccagca ccttcatccg
    13081 tctcgaccgg gccgcgatca cttccatcac ggtcgacatt cctaccgcgt cgaccccgac
    13141 ctgctccagg aagtgaatct cggcgggggt ctcatagctc ggccccggca gacaggcgta
    13201 caccccgtcc tccagcggac tgccgattgt ctcggccact tcgtgggcca gtcgacgcag
    13261 ctttacatcg tacgccaccg acatgtcggg aaaacgctgc tcgcccggca acaccgctcc
    13321 ggtcaagggt gaccggccgg tgaggttgat gtggtcccga atcagcatga cggtcccggg
    13381 cgcgaaggtc tggcggattc cacccgcggc gttggtgagg atgaggatgc gaactccgag
    13441 ggtagcgaaa acc
//
LOCUS       DASWKS010000351         5346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2042493, whole genome shotgun sequence.
ACCESSION   DASWKS010000351 DASWKS010000000
VERSION     DASWKS010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042493"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(234..2375)
                     /gene="ppk1"
                     /locus_tag="VGA78_10075"
     CDS             complement(234..2375)
                     /gene="ppk1"
                     /locus_tag="VGA78_10075"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003921.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEX9894260.1"
                     /translation="MTEVLATGREVDLRHPSLYLNRELSWLQFNRRVLHEALDPRTPL
                     LERVKFLGIVSNNLDEFFQVRVAGLKQQVAARYSERTADGMTPEEQLRAIADLVREFQ
                     RDHSRCLMEDVIPALAARGVELVVTEERLTDQDKQHLAEYYEANVFPVLTPLAVDPVH
                     PFPYISNLSVSLAVVLRDDMGDERFARVKVPKILPRWLPLPGAHRFAPLELAIGMHLE
                     SLFAGVEILGRYPFRITRNTDLEIDQDDDADDLLSLIQEEVRNRRFAEVVRLEVHPAM
                     PESLRQLLIEEFNADQEAEDLPLSLADVYEVGGLLDSSELLNLSTLDLTELRDPPFAP
                     VTPQRLATARSIFDVIRDGAVLVHHPYESFTSSVERFIQASVDDPDVLAIKLTLYRIG
                     ADSNTAKLLQQAAERGKEVAVLIELRARFDEESNIRWAKRLEDVGAHVSYGVAGLKTH
                     AKVILVVRREGNAIRRYVHIGTGNYAARTARIYTDFGLFSADPDLGADLSDLFNVLTG
                     FAYPERFRKVVVAPSQLRTWVVDRINRETEHARNGRPARILAKMNALVDAEVIHALYE
                     ASNAGVEIDLIIRGICCLRPQVPRVSERIRVLSIIGRFLEHSRAWYFANGGSDEVHIG
                     SADWMPRNFDRRIEVAAPIEDAEHRDAIRRVLELMLLDNRQAWDLFEDGSYQQRNPGD
                     APEQGTHRVLLERYKESGIRVETGSFPVVRG"
     gene            complement(2603..3661)
                     /gene="mnmA"
                     /locus_tag="VGA78_10080"
     CDS             complement(2603..3661)
                     /gene="mnmA"
                     /locus_tag="VGA78_10080"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEX9894261.1"
                     /translation="MSRQRVLVAMSGGVDSSVAAALLVEQGHEVIGATMKLFCYGDDV
                     PDRPCCSLDSINDARAVAHRLGIPHYLLNLEDRFGDKVIRNFVDEYARGRTPIPCVRC
                     NSFTKFRDLLAHADALGCDAIATGHYAIAERGELRRGRDPAKDQSYFLWGIDPAVVAR
                     MLTPVGSLTKQETRALARRLGLETADKPESVEICFVPDGDYVGVLQRRLPSDAPALSP
                     GPLVTTTGEVIGEHQGFARYTVGQRRGLPGGSSRPLYVIDIRPERREVVVGTAADLDG
                     LAVSLEEVNWLARPLAVGDQCAVQVRYRSQAVPATVVSQGTGTLDLALHQAARAITPG
                     QSGVLYDGDRVLGGGIIG"
     gene            complement(3654..4823)
                     /locus_tag="VGA78_10085"
     CDS             complement(3654..4823)
                     /locus_tag="VGA78_10085"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEX9894262.1"
                     /translation="MNPVYLDHAATTPVRPEALEAMLPFLSNAWGNPSSAHRFGRAAR
                     AGLDQARREVAEAVGAEPNQVVFTSGGTEADNLAVIGASLAARDRGDPMLAVVSAIEH
                     KAVLAAAHEVKHLGGAERILPVDRRGQVQLDALDQALADRPSVVSIMWVNNEVGVMQP
                     VAVLADRCHAAGVPFHTDAVQAFGKVPISVRALPCTLLTISGHKIGAPKGIGALVVRT
                     RGAVDAIIHGGGQQFGIRPGTENVAGAVALGRAALLAAREAAEEAVRVGALRDELAAR
                     LKAAVPDAVVHGEEADRAPHVLSVSAPGTDSEAFLMHLDLAGICASSGSACSTGAVEP
                     SHVLIAMGVSRELALSAVRFSLGRETTRDDIERVALAYPGIVDKVRQLSVVLGRV"
     gene            4896..>5346
                     /locus_tag="VGA78_10090"
     CDS             4896..>5346
                     /locus_tag="VGA78_10090"
                     /inference="COORDINATES: protein motif:HMM:NF019463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894263.1"
                     /translation="MYDELLSTVTSAPISYAVYSGLSFYGRRRGGELPGLWFVRAFGA
                     LGHAAPAVRQTLFRMERTAVLATRRAGRGKFYRLSPLAQAEADAGLAKILGPRPEAWD
                     GQWTLLHARFDWSERDQRERLYELLRSEGFAPLGAGAFLHPRDRAARI"
BASE COUNT          892 a         1779 c         1820 g          855 t
ORIGIN      
        1 cgtggcgaaa gcgaatcagc gcggggacca gctggtgacc atccgggtgg aactgccaga
       61 acagctgacg ccggagcagg aagaagcact caagcgattt gtggaggtgt cagggatgaa
      121 gcattaggga atgcagagtg cccaatgccc agtgcccatt gcagaaggag gtgaatcgat
      181 catccatcac cctctaccat gggcactggg cgttgggcac tctgcattcc ctttcagcct
      241 ctcaccaccg gaaatgaccc ggtttcgacc cggatcccac tctccttata ccgctccaac
      301 agtacccgat gggttccctg ctcgggggcg tcgccgggat tgcgctgctg gtagctgcca
      361 tcttcgaaca ggtcccacgc ctgccggttg tcgagcagca tgagctccag cacccgtcga
      421 atggcgtcgc ggtgctcggc atcctcgatg ggcgcggcca cctcgatccg gcgatcgaaa
      481 ttgcggggca tccagtcggc cgagccgatg tggacctcgt ccgaaccacc gttggcgaag
      541 taccaggcgc gcgaatgctc caggaatcgt ccgatgatgc tcaatacccg gatccgctcg
      601 ctcacccgcg gcacctgggg ccggaggcag cagattcccc ggatgatcag atcgatctcc
      661 acgccggcgt tggaagcctc gtacagggca tgaatcacct cggcgtcgac cagggcgttc
      721 atcttggcga gaatgcgggc cggccgtccg tttcgggcat gctccgtttc acggttgatc
      781 cggtcgacca cccaggtgcg aagctggctg ggcgccacca ccaccttgcg gaaccgctcc
      841 ggatacgcga agccggtcag cacgttgaat agatcggaca ggtccgcgcc caggtccggg
      901 tcggccgaga agagtccgaa gtcggtgtag atgcgggcgg ttcgggcggc gtagttgccg
      961 gtgccgatgt ggacgtagcg ccggatggcg ttcccctccc gccggactac cagaatgacc
     1021 ttggcgtggg tcttgagccc ggccaccccg tagctcacat gcgcgccgac gtcctccagc
     1081 cgcttggccc aacggatatt gctttcctca tcgaagcggg cccgcagttc gatcagcacg
     1141 gcgacctcct tgccgcgctc ggccgcctgc tgcagcagct tggccgtgtt ggaatcggcg
     1201 ccgatccgat agagcgtcag cttgatggcg agcacatcgg gatcgtcgac cgaggcctgg
     1261 atgaagcgct ccaccgagga ggtgaaactc tcataagggt gatgcaccag caccgccccg
     1321 tcgcgaatga cgtcgaagat gctccgcgcc gtggcgagcc gctggggggt gacgggcgca
     1381 aagggagggt cgcgcagctc ggtcaggtcc agcgtcgaca ggttcagcag ttcgctcgag
     1441 tcgagcagtc cgccgacttc atagacgtcg gccaggctga ggggcaggtc ctcggcttcc
     1501 tggtccgcgt tgaactcctc gatgagcagc tggcgcaggg attcgggcat ggcgggatgg
     1561 acttccagcc gcaccacctc ggcgaatctg cggttccgca cttcttcctg gatcaggctc
     1621 agcagatcgt cggcgtcgtc atcctgatcg atctcgagat cggtgttgcg cgtgatccgg
     1681 aagggatagc gacccaggat ctcgaccccg gcgaacagcg actccaggtg catgccgatc
     1741 gccagctcca gcggagcgaa ccgatgggcg ccgggcagcg gcaaccagcg gggcagaatc
     1801 ttggggactt tcacccgggc aaaccgctcg tcacccatgt cgtcgcgcag caccaccgcc
     1861 aacgacacgc tcaggttgga gatgtacggg aacgggtgga ccggatccac cgccaggggc
     1921 gtgagcaccg gaaagacgtt ggcctcgtaa tactcggcca ggtgttgttt gtcctggtcg
     1981 gtgagccgct cttccgtgac gaccagctcg accccccgcg ccgccagcgc cgggatgacg
     2041 tcctccatga ggcagcggga atgatctctc tgaaactcgc gaaccagatc cgcgatggcg
     2101 cggagctgct cctccggcgt catgccatcc gcggtgcgtt cgctgtaccg ggccgccacc
     2161 tgctgcttca gcccggcgac ccggacctgg aagaactcgt ccaggttgtt ggagacgatc
     2221 cccaggaact tgacccgctc cagcagcggc gtccgcgggt cgagcgcttc atgcaggacc
     2281 cggcggttga actgcagcca ggacagctcg cgattgagat agagggaggg atgccggaga
     2341 tcgacctccc ggcccgtggc gaggacttct gtcatggggg ttaatctagc gctggcgttc
     2401 cagtcggtca gtcggtcctt cggtcggtcg gtcggtcagt cgggcagtcg ggcagtcggg
     2461 ccgtcggtcg gtcggtcggt tggtcagtcg gtcagtcggt cgccgatcgg gacggtctgg
     2521 gggccgaaga aatgccgaaa cccacagcct ggcgggccgc ccgcccggac tgaccgacgg
     2581 accgacggac cgacggaccg acctagccga tgatcccgcc gcccaagacc cggtccccgt
     2641 catacaacac ccctgactgg ccgggagtga tggctcgggc cgcctgatga agtgccaagt
     2701 ccagggttcc cgttccctga gacaccaccg tggcggggac ggcctgggag cggtagcgaa
     2761 cttgaaccgc gcactggtca ccgaccgcca agggacgggc caaccagttg acttcctcca
     2821 gtgagactgc gagaccgtcc aggtccgccg cggttcccac cacgacctcc cgccgctccg
     2881 ggcggatatc gatgacgtag agcggccggc tggagccgcc gggaagaccc cggcgctgtc
     2941 ccacggtgta ccgggcaaag ccctggtgtt ccccgatgac ctctccggtg gtggtaacca
     3001 gcggaccggg gctgagcgcc ggagcatccg atggcagccg ccgctgcagc acgccgacgt
     3061 agtccccatc cggcacgaaa cagatctcga ccgattcggg cttgtcggcg gtctcgaggc
     3121 caagccggcg ggccagcgct cgggtttcct gtttggtcag cgagccgacc ggggtcagca
     3181 tccgggccac gaccgcggga tcgatgcccc agaggaagta gctctgatcc ttggcggggt
     3241 cgcggccccg ccgcagctcg ccccgctcgg cgatggcata gtgaccggtg gcgattgcat
     3301 cgcagccgag cgcgtcggcg tgcgccagca gatcgcggaa cttggtaaac gagttgcagc
     3361 ggacgcaggg aatgggggta cggccgcggg cgtactcatc cacgaagttc cggatgacct
     3421 tgtcgccgaa gcggtcttcc aggttgagca ggtaatgggg aatacccagc cgatgcgcca
     3481 cggcgcgcgc gtcgttgatg gaatcgagcg agcagcaggg gcggtcgggg acgtcgtcac
     3541 cataacagaa cagcttcatg gtggcgccga tcacctcgtg gccctgctcg accaggaggg
     3601 cggcggccac cgagctgtcg accccgcccg acattgccac cagcaccctc tgtctagaca
     3661 cggcccagca ccaccgacag ctgtcggacc ttgtcgacga ttcccgggta cgccagggcg
     3721 acccgttcga tgtcgtcgcg ggtggtttcc cgccccagac tgaagcggac cgcgctcaag
     3781 gccagctccc ggctcacgcc catcgcgatg aggacgtgag agggctccac cgccccggtc
     3841 gaacaggccg agccgctgga ggcgcagatc cccgccagat cgaggtgcat caggaacgcc
     3901 tcgctgtcgg ttcccggcgc cgacacgctg agcacgtggg gagcccggtc ggcctcctcg
     3961 ccgtgcacca cggcatcggg cacggcggcc ttgagccggg ccgcgagctc gtcgcggagc
     4021 gcgcccaccc ggaccgcctc ctcggcagcc tcgcgcgcgg ccagaagggc ggcccgtccc
     4081 agcgccaccg cgcccgctac gttctcggtc ccggggcgaa tgccgaattg ctgcccgcca
     4141 ccgtggatga tggcatccac cgccccgcgg gtgcgcacca ccagcgcgcc gattcccttg
     4201 ggagcgccga tcttgtggcc ggagatggtg aggagtgtgc aggggagggc gcgaaccgag
     4261 atggggacct tgccgaaggc ctggacggcg tcggtgtgaa aggggacgcc ggcggcgtga
     4321 catcgatcgg cgaggacggc gaccggctgc atcaccccga cctcgttgtt gacccacatg
     4381 atcgacacca ccgagggccg gtccgccagg gcctgatcga gcgcgtcgag ctgcacctgg
     4441 ccccgccggt ccaccggcag aatccgctcc gctccaccca gatgcttcac ttcatgtgcg
     4501 gcggcgagca ccgccttgtg ctcgatcgcc gacaccaccg cgagcatcgg atcaccccgg
     4561 tcgcgggcag cgagggacgc gccgatcacc gcgagattgt cggcctcggt gccgcccgag
     4621 gtgaacacca cctggttcgg ctcggcgccg accgcctccg ccacttcgcg ccgagcctga
     4681 tccagaccgg cgcgagcggc gcggccgaac cgatgggcgc tcgacggatt gccccaggcg
     4741 ttgctgagga acggcagcat cgcctccagc gcctcggggc ggaccggggt ggtggcggcg
     4801 tggtcgaggt acacgggatt catcggcgaa aatatagcgg ggaacgggcc cggggtggct
     4861 gtcgaaactc cccgataata gttaacgtat ttgcgatgta tgacgaatta ttgtcaactg
     4921 ttacctcggc ccccatcagt tacgcggtgt actccggctt gagcttctac ggccggcggc
     4981 ggggcggcga gctgccgggc ctgtggtttg tgcgggcgtt cggggccctg ggccacgcgg
     5041 cgcccgcggt ccgtcagacc ttgttccgga tggagcgcac ggcggtgctg gcgacccggc
     5101 gggcgggacg gggcaagttc tatcggctgt cacccctggc ccaggccgag gcggacgcgg
     5161 gtctcgccaa gattctcgga cccaggccgg aagcctggga cgggcaatgg actctgctgc
     5221 acgcccggtt cgactggtcg gagcgagacc agcgggagcg attgtacgag ctgctgcgca
     5281 gcgagggctt cgctccgctt ggggccggcg ccttccttca cccccgcgac cgggcggccc
     5341 gcatcc
//
LOCUS       DASWKS010000352         7157 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3151810, whole genome shotgun sequence.
ACCESSION   DASWKS010000352 DASWKS010000000
VERSION     DASWKS010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7157
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3151810"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VGA78_10095"
     CDS             <1..429
                     /locus_tag="VGA78_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX9894264.1"
                     /translation="ATSTFYHSVKGWTESHSSNYDYAVLVLPSAQKLGNQVGWMGLAN
                     LSYFSLLGLNVNNSGYPGDKPYGTQWWNANNILAVTDRRVYYRIDTYGGQSGSPDWRY
                     KDGQRHIVAVHNTGGAVFNGGVRIVQPVFDNLVQWKNLYT"
     gene            522..800
                     /locus_tag="VGA78_10100"
     CDS             522..800
                     /locus_tag="VGA78_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894265.1"
                     /translation="MRVEEAVARGARGEVRLTGFLVGRIEGDVRLCAELLESYPPQCG
                     GSSVVVRGLRRDAIPTLRMEQGGLWSEGEVEIAGTLERGVLEVSAGAG"
     gene            1090..1722
                     /locus_tag="VGA78_10105"
     CDS             1090..1722
                     /locus_tag="VGA78_10105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894266.1"
                     /translation="MSTLLSCSALVGMLGLLLGATPVPMAAQQQTEADEYTRYVLLAP
                     ETGKFQISYEVSATTPGARYFFNPIRKGSEASDEAVFDRMTGAPLRFEVVDGATARAG
                     GLPSADLETQYIRIELPRSVPREGEVRILIDKTYRDPKSYYLDGADLVFTRSLGIKRN
                     AVVLPDGYELIGCNVPSQVLTDDRGRTFLSFINAGPDAASLVVRARRLAR"
     gene            2004..3938
                     /locus_tag="VGA78_10110"
     CDS             2004..3938
                     /locus_tag="VGA78_10110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894267.1"
                     /translation="MATPFLRSFGRGRRALLGAAVGFASFAGCGETTVNAPLPPARLE
                     AVDGAGLSGPAGRVLPDPIEVRVFGSDDQPLPGATVTFSAASGGSVDPATAVTDGSGI
                     ARTRWTLGQTAGANVLTATASGISTTITATVTASRPATVAGVAGDNQSAPAGTAVPIA
                     PSVRVTDGFGNLVADALVSFSVLSGGGRVTNGLRLTNSQGIATVGSWILGPASGVHTL
                     AARVEEGGVDNNPVVFTATATAPTGSQMVATAGNNQQAPVGRLVPVAPTVAVRNAAGD
                     GVPGASVTFEVTSGGGSVVAAHQITDATGAASVGGWFLGALPGTNTLRASSPGLPAVT
                     FTATGVAGVPVSMVAASQTTQTAPAGTNVSDPPSVIVRDISGVPVSGIVVTFVVTAGG
                     GSVTGSPVTTNANGVATLTAWKLGVVIGLNTVTATAAGLPSVTFNATAAAGVPANVVA
                     TAGTNQVAVQGTAVAQQPTVKVTDANGNPVVGASVTFAVLLGGGSATGLNQVTDVLGL
                     AVVGSWTLGSGAPNTLRATVTGSGVTGNPVTFTAQSATQIAITSAPAGPINLGTNFTI
                     TVQLRNSAGAAVALSSVQLTIAIASGGGTLNGTLTRSTDSGGTVSFTLINVTGAAGAR
                     TFTITGAGLLPATTGSITFN"
     gene            3938..4615
                     /locus_tag="VGA78_10115"
     CDS             3938..4615
                     /locus_tag="VGA78_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894268.1"
                     /translation="MTITMRRESINVMATARRALGLVTGAMMAATVVSAQTGPTSSGS
                     WRIGASTGGYVPLSSLIVAADSHDTRLGAGPVFSLDLQYLASPSVSVYANGILTFGTI
                     TLGSSIRSSVVGPSNQVMLTGGTAGVLLTATGWLGGHFQPTLRLGGGFKWYLFDLTDA
                     QDQVRPTVDIGLGFRGVGNGPIEVTAEARYLLSSFDQSKLPTQGIAPQDQRQGDLVFA
                     IGIGIRP"
     gene            4870..5529
                     /locus_tag="VGA78_10120"
     CDS             4870..5529
                     /locus_tag="VGA78_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894269.1"
                     /translation="MRRLARAGILLWAATPLVAQTPAGGSAALRARLTERATQTREIV
                     YFLQQPETHAFDLYHDYTESREGVDRYLNVVRPGSTVSKPRAIVLDTGEPLETQILTG
                     DAITRAQIDIGEPVKPETELVLIRFPPVQKGRTLRLRISETYTDPARYRLEGDELIWD
                     RGFGRPSNAVVLPAGWYLTHSAVPATVSLTDDGRVRLDFVNPRLDEIQVLIVARRRAS
                     R"
     gene            5526..6185
                     /locus_tag="VGA78_10125"
     CDS             5526..6185
                     /locus_tag="VGA78_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894270.1"
                     /translation="MTGLAGRAAPLLWCVGLAACASVGRRLTIAYGAVAAQVAQDQVQ
                     IELNRSFIAAYQNRVTIDATFTVDAISDRSNPPMFDGDYHFAGRAPEIGLRLVGEIKN
                     ASSADSAVELVKQAQATERPVKITGAWRVWPEHAFGAREEQGRQTTPLRNANPDHVFE
                     IHPITRAGGINLLHTYRPVDGYLPAAPSGPSTSTRTRKYSLEGRLPYEIVVLGLYPAD
                     R"
     gene            6223..>7157
                     /locus_tag="VGA78_10130"
     CDS             6223..>7157
                     /locus_tag="VGA78_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894271.1"
                     /translation="MYLTLLALASIQAPAARAPMMASVDTALLRGMRYRLVGPSRGGR
                     VTTVSGVPSQPRTFYLGVASGGVFRTTDGGESWVPITDGKVPLGSTGSIAVSESNHEV
                     IYLGTGSDGVRSNVSTGRGVYRTADAGTTWEFAGLYHAGQIGAVRIHPSDPNTVWVAA
                     YGDLFKPNAERGVFKTTDGGKNWKKTLFVSDSSGAMDLELQPGNPGVVYAWMSRIERK
                     PWSIISGSREGGFYRSNDGGETWSPIRTGLPTDLIGKGNLAVTPANPRRVYALIEAKP
                     GGGLYRSDDAGESWTQVNSQGSLIQRPFYYTTLGA"
BASE COUNT         1197 a         2416 c         2383 g         1161 t
ORIGIN      
        1 gccaccagca cgttctacca cagcgtcaag ggctggacgg agagtcatag ctcgaactac
       61 gactacgcgg tgttggtgct gccgtccgcc cagaagctcg gcaaccaggt aggttggatg
      121 gggctagcca acctgtccta cttcagtctg ctcggcctga atgtcaacaa ctcgggctac
      181 ccgggcgaca agccatacgg cacgcagtgg tggaacgcca ataacattct ggccgtcacg
      241 gaccggagag tctactaccg catcgacacc tatggcgggc agagtggcag cccggactgg
      301 cggtacaagg acggacaacg gcacatcgtg gccgtccaca acaccggcgg cgccgttttc
      361 aacggcggcg ttcgcattgt gcagccggtc ttcgacaacc tggtacagtg gaagaacctg
      421 tacacctgag gtcagcgcgc cgggtcgcgg ggaggcgggc caggttggtc ctccttctcg
      481 cggccgcgac ctgcggcagt ccctttggcg ccggaggtgt catgcgagtg gaggaggctg
      541 tcgcccgggg agcgcgcggc gaggtccggc ttacgggatt cctggtgggg cgcatcgagg
      601 gagacgtacg tctctgtgcc gagctgctcg aatcgtaccc cccgcagtgc ggtggaagct
      661 cggtggtggt acgcggcctt cgccgcgatg ccattccgac cctgcgtatg gagcagggcg
      721 ggctctggtc cgagggcgag gtagaaatcg ccgggactct agaaagggga gtgctggagg
      781 tatccgcagg agcagggtag caagcgccca ttgtcgtcat caccaccatg cttcggttga
      841 cacgcaccgc taccgagccg ttgattccgc ggtacaacag ctcgtgagca ggcccggact
      901 gcatcgcagc gccttcgagc ggggtactgc gttcgaggtc ctaggccggc gggtaggaat
      961 ggagctggac cgtgacgtcg gcatttgatg gaaggagggc cagaacccta tcagccctgc
     1021 ccggagcccc cggtgtagcc ggcttcccca ccgccgggta tcatggggac accgcgttcg
     1081 gggatctcag tgagcaccct gctttcttgc tcggccctgg tgggcatgct tggcctcttg
     1141 cttggcgcga cacccgttcc gatggcggcc cagcagcaga ccgaggcgga tgaatacacc
     1201 cgctacgtgc tgctggctcc ggaaacgggc aagttccaga tctcctacga ggtgtccgcc
     1261 accaccccgg gcgcccgcta cttcttcaat cccatccgga aagggagcga ggccagcgac
     1321 gaagccgtct tcgaccggat gaccggcgcc ccgctccggt tcgaagtggt cgatggcgct
     1381 accgcccgcg cgggcggcct gccgagcgcc gatctggaaa cccaatacat ccgaatcgag
     1441 cttccccggt cggtcccccg cgagggcgaa gtccggatcc tgatcgacaa aacctatcgc
     1501 gatccgaaga gctactacct cgacggagct gaccttgtgt ttacccgctc cctcgggatc
     1561 aagcggaacg ccgtggtgct gcctgacggc tacgaactca tcggctgcaa tgtgccgtcg
     1621 caggtcctca ccgacgaccg gggccggacc ttcctcagct tcatcaatgc cggcccggac
     1681 gccgcctcac tggtggtgcg ggcccgccgg ttggcgcgat gacacggctc gcaccagccg
     1741 acgcctcccc acccccttgc tagccgagct caaggccctt gccaacaagc gcaataagcc
     1801 gtatcagata ttgttgaggg tgttcctgtc ggaacgtctc ggcggctctc taccgccagc
     1861 cgacctccag cggatcgcgc cccacgcacc ctctccgtgc ccgtcacttt cgggccgaga
     1921 ctcccgtagg gatctccggc gccacgcttg gggcgcagac tccaacgcat tctgtaggtc
     1981 ggctttcacg acgggcgctc acagtggcaa ccccattcct ccggagtttc ggtcgaggac
     2041 gccgggcgct cctcggcgca gcggttggat tcgcgagctt cgccggctgc ggcgagacca
     2101 ccgtcaatgc accgctcccg ccagcgcggc tggaggccgt cgatggtgcg gggctgagtg
     2161 gtcctgcggg acgtgtcctc cccgatccca tcgaggtccg tgtcttcggc agcgatgatc
     2221 agccgttgcc aggagcgacc gtaaccttca gtgcggccag cggcggctcc gtcgatcccg
     2281 cgaccgcggt caccgacggg agcggcatcg cccgtacccg ctggactctc gggcagacgg
     2341 ccggggccaa cgttctcacg gccaccgcaa gcggaatatc aaccacgatc acagccaccg
     2401 tgaccgccag ccgcccggcg actgttgccg gggtagccgg cgacaaccaa tccgcgcccg
     2461 ccggcaccgc cgtcccgata gcacccagcg tgcgggtcac cgatggcttc ggcaatctgg
     2521 tggcagacgc actggtgagc ttctcggtcc tctcgggcgg tggccgggtg accaacggcc
     2581 ttcgcctgac caattcccag ggcatcgcca ccgtgggaag ctggatcctc ggcccggcct
     2641 cgggggtgca cacgttggcc gcccgggtcg aagagggcgg cgtagacaac aatccggtcg
     2701 tcttcaccgc caccgcaacg gccccgaccg ggtcgcagat ggtggcgacg gccgggaaca
     2761 accagcaggc accagtcggc cggctggtac cggtggctcc gacggtggcg gtcaggaacg
     2821 ccgccggtga cggagtgccg ggggccagtg tcacctttga ggttacgtcc ggtgggggca
     2881 gcgtggtcgc cgcgcatcag ataaccgatg ccaccggggc ggcctcggtc ggtggatggt
     2941 ttctgggcgc tttgcccggc acgaatacgc tcagggcctc ttcacctggg ctcccggcag
     3001 tgactttcac cgcaaccgga gtggcggggg tgcccgtctc gatggtcgcc gcctcacaga
     3061 ccacgcagac ggcccccgcc ggcaccaacg tcagcgatcc gccgagcgtg atcgtgcgtg
     3121 acatctcagg cgtaccggtc tcgggaatcg tcgtgacgtt tgtcgtgacg gccggtggcg
     3181 ggagtgtcac cggctctccg gtcacgacca acgccaacgg cgttgcgacg ctcacggcgt
     3241 ggaagctcgg tgtggtgatc gggctcaaca ccgtaacggc caccgcggcc gggcttccga
     3301 gcgtgacctt caacgccacg gccgccgcgg gcgtgccagc caacgtcgtc gcgaccgccg
     3361 gcactaatca ggtggcggtg caaggaacgg ccgttgccca gcagccgacc gtcaaggtga
     3421 cggatgccaa cgggaacccg gtggttgggg cgagcgtgac gtttgcggta ttactcgggg
     3481 gcggatccgc cacggggttg aaccaggtca ccgacgtgct gggcctggcg gtggttggca
     3541 gctggaccct cggcagcggg gcccccaaca ccctcagggc gacggtcacg ggatccggcg
     3601 tcaccggcaa cccggtgacc tttaccgcgc agtcggccac ccagatcgcg atcacgagcg
     3661 caccggccgg gccgatcaac ctcggcacga acttcaccat cacggtgcag ttgcggaact
     3721 cggccggtgc cgctgtcgcg ctgtcgagcg tgcagttgac cattgccatc gcctcgggtg
     3781 gcggcacgct caatggcact ttgacgaggt ctactgatag cggcggcacg gtcagcttca
     3841 cgctcatcaa cgtgaccggg gcggcgggcg ctcgcacctt cacgatcacc ggggcgggtc
     3901 tgcttccggc gacgaccgga tcgatcacct tcaactgatg accatcacca tgagacgcga
     3961 atcgataaac gtgatggcaa cggcacgccg ggcgctcggg ctcgtgaccg gcgctatgat
     4021 ggcggcgacg gtcgtaagcg cgcaaacagg gccaaccagc tcgggcagct ggcgaatcgg
     4081 cgcctcgacc ggcgggtacg tacccctctc gtcgttgatc gtcgcggcag actcccacga
     4141 cacacggctc ggggccggac cggtcttctc gctcgacctg cagtacctgg cctccccgtc
     4201 cgtttcggtc tacgcgaacg gcatcctgac ctttgggacc atcacgctcg ggagctcgat
     4261 ccgctcatcg gtggtcggtc catccaacca ggtgatgctg acggggggca cggctggagt
     4321 gctgctcacg gccaccggct ggctcggagg gcatttccag ccgacgctcc ggctcggcgg
     4381 cgggttcaag tggtacttgt tcgatctcac cgatgctcag gaccaggtgc ggccgaccgt
     4441 ggacatcggc ctgggtttcc gcggggtcgg caatggaccg atcgaggtga cggcggaagc
     4501 gcggtacctg ctgagctcgt tcgatcagag caaactgccc actcagggca tagcccccca
     4561 ggaccagcgg cagggcgacc tggtgttcgc gatcgggatc gggatccggc cgtagtcggt
     4621 tgcgagtctt cgtcgccgcc ttggccaccc gaagtcactg acggggtgca tggcgccact
     4681 ccagcctgaa gtcgttccgc tggtgcttga gatcctcggc caaatacacc gtggccatac
     4741 gccccagttc ccagctcctg ctcaagcagg cacgaacgtg atcgagtcct tatggacatc
     4801 gaggccgagg tagataatcg gggcggacat ggactggtta tcggtggtgc ggacccgccg
     4861 gttggcccga tgagacggct ggcccgagcc ggcatcctgc tctgggccgc gactccgctt
     4921 gtggcccaga ccccggcggg tggctcggcc gcgctgcgag cccggctcac cgagcgggcc
     4981 acccaaaccc gcgagatcgt gtatttcctg cagcagccgg agacccacgc cttcgatctc
     5041 taccacgatt acactgagag ccgcgagggg gtggaccgct acctcaacgt ggtgcggccc
     5101 ggcagcacgg tgtcgaaacc ccgcgctatc gtcctcgaca ccggcgaacc gctcgagacc
     5161 cagatcctca cgggcgacgc gatcacccgg gctcagatcg acatcggcga gccggtcaag
     5221 cccgagaccg agctggtgct gatccggttc ccgcccgtgc aaaaggggcg gaccctccgg
     5281 cttcggatct cggagaccta caccgacccg gctcgctacc ggctggaagg cgatgagctg
     5341 atctgggatc ggggcttcgg ccgtccatcc aatgcggtgg tgctgccggc cgggtggtac
     5401 ctcacccaca gcgcggtccc ggctaccgtc tcgctcaccg atgacgggcg ggtccggctc
     5461 gacttcgtga acccgcggct ggacgagatc caggtcctga tcgtggccag gcggcgagcg
     5521 agccggtgac ggggttggcc gggagagcgg ctcccctgct ctggtgcgtt ggtctggcgg
     5581 cctgcgcttc ggtgggccgc cggctcacga tcgcgtacgg agcggtggcg gcgcaggtgg
     5641 cccaggatca ggtccagatc gagctcaacc ggtccttcat cgcagcctac cagaatcggg
     5701 tgaccatcga cgcgaccttt accgtcgatg ccatctcgga tcggtccaac ccgccgatgt
     5761 tcgacggcga ctaccacttc gccggtcgcg cccccgagat cggcctacgc ctggtgggcg
     5821 agatcaagaa cgcgagctcg gcggattccg cggtcgagct ggtgaaacag gcccaggcga
     5881 ccgaacggcc ggtcaagatc accggcgcct ggcgggtgtg gcccgagcat gccttcggcg
     5941 cgagagagga gcagggccgt cagacgacgc cgctccggaa tgccaacccc gaccacgtgt
     6001 tcgagattca ccccattacc agagccggcg gcatcaacct gctccacacc tatcgtccgg
     6061 tggacggcta cttgccagca gcaccaagcg gaccttcgac atctaccagg acgcgaaaat
     6121 attcgctcga gggccggttg ccctacgaga ttgtggtgct gggtctgtac ccggccgacc
     6181 ggtaactccg gctcaactcc agcgaccaac tgaggattcg agatgtacct gacactcctc
     6241 gccctcgcgt ccatccaggc accggccgcg cgcgctccga tgatggcctc ggtcgacacc
     6301 gcgctcctcc gcggcatgcg ctaccggctg gtcggaccgt cgcggggcgg gcgggtgacg
     6361 acggtcagcg gcgtgccctc ccaaccccgg acgttctacc tgggcgtggc gagcggaggg
     6421 gtctttcgca ccaccgacgg cggggagagc tgggtcccca tcaccgacgg caaggtcccg
     6481 ctcggctcca ccggctcgat cgcggtgagc gaatcgaacc acgaagtcat ctacctgggc
     6541 accggatcgg atggggtgcg gagcaacgtc tccaccgggc ggggcgtgta ccggacggct
     6601 gacgccggca cgacctggga attcgccggg ttgtaccacg ccggacagat cggggcggtc
     6661 cggatccatc cctccgatcc caataccgtc tgggtcgcgg cctacggtga tctgttcaag
     6721 ccgaacgccg agcgaggggt gttcaagacc accgacggcg ggaagaactg gaagaagacc
     6781 ctcttcgtgt cggacagcag cggggcgatg gacctggagc tgcagccggg taatcccggc
     6841 gtggtctacg cctggatgtc gcgcatcgag cgaaagccct ggagcatcat cagcggctcg
     6901 cgcgaagggg gcttctaccg aagcaatgac ggcggcgaaa cctggtcccc catccggacc
     6961 ggccttccca ccgacctgat cggcaagggc aatctcgcgg tcaccccggc gaacccccgc
     7021 cgggtgtacg cgctgatcga agccaagccg ggcggcggac tgtaccgctc cgacgacgcg
     7081 ggcgagagct ggacccaggt caactcgcag ggctcgctga tccagcggcc cttctattac
     7141 accacgttag gcgccga
//
LOCUS       DASWKS010000353         4488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_174083, whole genome shotgun sequence.
ACCESSION   DASWKS010000353 DASWKS010000000
VERSION     DASWKS010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174083"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..486)
                     /locus_tag="VGA78_10135"
     CDS             complement(94..486)
                     /locus_tag="VGA78_10135"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9894272.1"
                     /translation="MKLGRPAQVLLVEDSPFLRYAARAVLQRRGYDVLEAADGQEALD
                     LLARTRPDVILLDLVMPRVSGEEVLRALKNNPELARVPVVMLSPEPDSETGTALAGQV
                     EGWFDKARMSLVHLADRVEAVLNDRRVA"
     gene            complement(483..1580)
                     /locus_tag="VGA78_10140"
     CDS             complement(483..1580)
                     /locus_tag="VGA78_10140"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX9894273.1"
                     /translation="MTRIPAPPGDGQRFPVLFEHTSDIALVVDADGAVRDLNPAAERL
                     LGFKRNDVVGHSLLEFIAPEHRADVAAIPQRMGPGAELETEVELVSRSGDHIVLDART
                     VPVTRPGRATEYHWIARDRTRRKLAEERVRAAQDVSNDFVAAVSHQLRAPLTVIKWSL
                     ELAANTPGIGPEVKELIAGSQSAAEELIRVSTDLLNYARIDEGDTPFTYEQVDLGALT
                     WKVLRDLRWFASAQRHQITVGTAGQDASALSDPIPLSQVMQTLLGNAIRYTPPGGQIN
                     VGIMGERDSVVWSISDTGPGIPAGLLERVFDQFADVTGSGVGLYIVRRLVERLGGSAW
                     VESAPGEGSTFAVRIPRSPSQVAPSTDAEAA"
     gene            complement(1577..2383)
                     /locus_tag="VGA78_10145"
     CDS             complement(1577..2383)
                     /locus_tag="VGA78_10145"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX9894274.1"
                     /translation="MSPVESRLLDSVLAPGGLRTLFHPIYEVSGAEGTKLWAVEALIR
                     GPRNTNLESAVTLFEFVRRKRAEPVVDRACIRTALGEARHIPNAPSIGLNVHASTLGR
                     DPDFLSFLLQTALENEIAQERLIVEIVEQVPYYHERTFRRNLDQLRNRGIRVALDDVG
                     VGHSNLRMILETRPQVLKIDGTIVRGCHADYYRWALLEWTQTLAARLGAWPLAEGIED
                     QADLAAVTACGIRLVQGFVFCKPMPAAELAAVDLVARARLVLAELPLEAA"
     gene            complement(2380..2757)
                     /locus_tag="VGA78_10150"
     CDS             complement(2380..2757)
                     /locus_tag="VGA78_10150"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9894275.1"
                     /translation="MLPSLLIVEDSEPIRFGLTEYFRTRGYNVDAAGELEEALALLTS
                     RGYDLVITDLRLSEVGQVEGLDVIAEIRERYPDTRVILLTAYGSPAVEAAAIHLGVDL
                     FLQKPIRLGELEQAAVGLLRQAA"
     gene            complement(2963..4333)
                     /locus_tag="VGA78_10155"
     CDS             complement(2963..4333)
                     /locus_tag="VGA78_10155"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9894276.1"
                     /translation="MSSTRQRVLLVDDEPSIRFAVRDFLETHGFEVIEAETCESGQKG
                     FHETAPDIAILDYSLPDGTALDLLPRLRAEDPSVPIIVLTGHGSIDLAVRAIKEGAEQ
                     FLTKPVELPALLLVVSRALENQRHRKVSTADSSRENRDAVDVFLNGSPAMRRLQRDAQ
                     IALEANSPVMLLGETGAGKGVLARWLHRHGRRSTEPFVDLNCAGLSRELLESELFGHE
                     KGAFTGAVATKVGLLEAAHRGTLFLDEIGDMDLSIQARLLKVLEEQRFRRVGDVRERR
                     VDVRLISATHHDVEALVKEGRFRGDLFYRIGAIPLRVPSLRERREDIVPLAHVMLNRL
                     GADLGRPGIGLSPGAGEALVAHDWPGNIRELRNVLERALLLARGPVIEAGMLPLAVPG
                     PGSGATDSSDEADLTLSLEEIEQRHIERVLKHEGGHVERAAVRLGISRSTLYQKIRRY
                     QSGTSR"
BASE COUNT          737 a         1574 c         1452 g          725 t
ORIGIN      
        1 ccacccgtcc cggagcgggt cgtgcgtccg cctgcgccga aagcgacccc gccgaggcca
       61 ccagggccgc gccagccagc cagagcgtcc gggtcacgcg acccgccggt cgttgagcac
      121 agcctcgacc cggtccgcca ggtgtaccag cgacattcga gccttgtcga accagccctc
      181 cacctgacct gcgagagccg ttccggtctc ggagtcgggt tcgggactca gcataacgac
      241 cggaacccgg gccagttcgg ggttgttctt gagggcccgg agcacttcct cgcccgacac
      301 ccggggcatg accagatcga gcaggatgac atcgggccgg gtccgggcca gcaggtccag
      361 cgcttcctgc ccgtccgccg cctccagcac gtcgtagccc cgtcgctgaa gcaccgccct
      421 cgcggcatac cgcaggaagg gggagtcttc caccagaagg acctgggccg gccggccgag
      481 tttcacgcgg cctccgcgtc ggtagaagga gccacctggc tggggctccg ggggatccgc
      541 accgcgaagg tcgacccctc acccggtgcc gactcgaccc acgcgctccc acccagccgc
      601 tccaccagcc gccgtacgat atacagcccc actccgctgc ccgtgacgtc agcgaactgg
      661 tcgaacaccc gctccagcaa tccggccgga atgcccggtc cggtgtccga aatggaccac
      721 accacgctgt cgcgctcgcc catgatgccg acgttgatct gtccgcccgg cggggtgtat
      781 cggatggcgt tgcccagcag ggtttgcatg acctggctca gcggaatggg atcgctcagg
      841 gccgaggcgt cctgaccggc ggttcccacc gtgatctggt gccgctgggc gctggcgaac
      901 cagcggaggt cccgcagcac cttccaggtc agggcgccga ggtcgacctg ctcgtaggtg
      961 aaaggcgtgt cgccctcgtc gatccgggcg tagttgagga gatcggtgga aacccggatc
     1021 agctcctccg ctgcgctctg ggaaccggcg atgagctcct tgacctcggg gccgataccg
     1081 ggcgtgttcg ccgccagctc cagcgaccac ttgatcacgg tgagcggcgc ccgcagttgg
     1141 tgactcaccg ccgcgacgaa gtcgttcgag acatcctggg cggcccggac ccgctcctcc
     1201 gccagtttgc ggcgggtgcg gtcccgcgcg atccagtggt actccgtcgc ccggcccggt
     1261 cgcgtcactg gtaccgtccg cgcatcgagc acgatgtggt ctcccgacct gctgacaagc
     1321 tccacctcgg tctcgagttc ggcgccgggc cccatacgtt gggggatggc tgcaacgtcc
     1381 gcacggtgct ccggcgcgat gaactcgagc agagagtggc ctaccacgtc gttccgcttg
     1441 aacccgagca ggcgctcggc ggcaggattg agatcacgaa cggcgccatc tgcgtccacc
     1501 acgagggcga tgtcgctggt gtgctcgaac agcaccggga agcgttgccc gtcgccgggc
     1561 ggcgccggaa ttcgggtcac gcggcctcta aggggagctc ggcgagcacc agccgggccc
     1621 gcgcgaccag atccacggcg gccagctcgg cggcgggcat cggtttgcag aagacaaatc
     1681 cttgcaccag ccgaatgccg caggccgtga ccgccgccag gtcggcctgg tcttcgatgc
     1741 cttccgccag aggccaggca cccaggcgcg ccgccagcgt ctgggtccac tccagcaggg
     1801 cccagcgata gtagtcggcg tgacaacccc ggacgatggt gccgtcgatc ttgaggacct
     1861 ggggccgggt ctccaggatc atgcggaggt tcgaatgccc gacgccgacg tcatccagcg
     1921 ccacccggat gccccggttg cgcagctggt caaggttgcg gcggaaggtc cgctcgtgat
     1981 agtagggcac ctgctccacg atctcgacga tcagccgttc ctgggcgatc tcgttttcca
     2041 gcgcggtctg gagcaggaac gacaggaaat cggggtcacg tcccagggtc gaggcgtgca
     2101 cgttgagccc aatggacgga gcgttcggaa tgtggcgcgc ctcgcccagc gcggtgcgga
     2161 tgcaggcccg gtccacgacc ggttcggccc gcttgcgccg cacgaactcg aacagcgtaa
     2221 ccgctgactc caggttggta ttgcgggggc cgcggatcag ggcttccacc gcccagagct
     2281 ttgtgccctc ggcgcccgac acctcgtaga tcgggtggaa cagcgttcta agtccgccgg
     2341 gtgcgaggac cgagtccagc agtctcgatt ccacagggct catgcggcct gccgcaacaa
     2401 gccgaccgcg gcttgctcca gttcacccag ccgaatgggc ttctgaagaa acaggtcgac
     2461 acccaggtgg atcgccgccg cttccaccgc cggagagccg tacgcggtca ggagaatgac
     2521 ccgcgtatcg ggataccgct cccggatctc ggcgatcacg tcgaggccct cgacctgacc
     2581 gacctcggac aaccgcagat cggtgatcac caggtcgtag ccccggctgg tcaggagcgc
     2641 gagcgcctct tccaactcgc cggccgcgtc cacgttgtat ccccgggtcc ggaagtactc
     2701 ggtcaggcca aaccggatcg gctcggaatc ttcgacgatg agaagggacg gcaacacatt
     2761 agctccgtga atggtcgcca tcccttaagg caagccggcg gccattctgg gttcgagctc
     2821 gcagcagttc tactaagcta tgaatttaca acgagttaca ccaactgatt ccgaccagga
     2881 tcagggccgg catgagcagt agaagtggtc tcgattccag attccagtcc ggattccgga
     2941 ctgagattgc ggggcagagg gcctagcgcg aggtccctga ctggtaccgg cggatcttct
     3001 gatacagggt gctgcgagag attcctagac ggactgcggc ccgttcgacg tggccgcctt
     3061 cgtgtttgag gacccgctcg atatgccgct gctcgatctc ctccaggctc agggtcaggt
     3121 cggcctcgtc actcgagtcg gtcgctccac tcccaggtcc cggaaccgcg agtggcagca
     3181 tgccggcttc gatcaccggg ccacgggcca ggagcagagc ccgctcgagc acgttccgga
     3241 gctctcggat gttaccaggc cagtcgtgcg ccaccagcgc ctctcccgcc ccgggcgaca
     3301 gcccgattcc gggacggccc agatctgcgc ccaggcggtt cagcatcacg tgggccagtg
     3361 ggacgatatc ttcgcggcgc tctcgcagtg aaggcacccg caacgggatg gccccgatcc
     3421 ggtaaaacag gtccccccgg aacctgcctt ccttcaccaa cgcttcgacg tcgtggtgcg
     3481 tggcgctgat caggcgcacg tccacccgcc gctcccgcac atcgcccacc cgccggaagc
     3541 gttgctcctc cagcaccttg agcagccggg cctggatcga gaggtccatg tcgccgatct
     3601 catccagaaa cagggtgccg cggtgggccg cctccagcag cccgaccttg gtcgcgaccg
     3661 ccccggtaaa ggcgcccttt tcgtggccga acagctcgct ttccagcagt tcccgcgaca
     3721 atccggcgca gttgagatcg acgaacggct cggtcgaccg gcgtccatgt cggtgcagcc
     3781 agcgcgccag cacccccttg ccggctccgg tttcccccaa cagcatgacc gggctgttgg
     3841 cttccagcgc gatctgggcg tcgcgctgga gccgtcgcat ggccgggctg ccgttcagga
     3901 aaacgtcgac ggcgtcgcgg ttctcccggc tcgagtccgc ggtgctgacc tttcgatggc
     3961 gctgattctc cagcgctcgc gataccacca gcagcagggc aggcagctcc accggcttgg
     4021 tgaggaactg ctcggcccct tccttgatgg cccggaccgc caggtcgatc gagccgtggc
     4081 cggtcagcac gatgatcggg accgaggggt cctcggcgcg gagtcggggc agcaaatcga
     4141 gagcggttcc gtccggcagc gagtagtcca ggatggcgat gtcgggcgcg gtctcatgga
     4201 aacccttctg gccgctctcg caggtctccg cttcgatgac ctcgaacccg tgggtctcca
     4261 gaaaatcccg cacggcgaac cggatggatg gttcatcgtc caccaacagg acccgctgcc
     4321 gggtggagct cacgcgccgt cctcgccatc cgccggctgc agcggcaagc gcacttccac
     4381 caccgccccg ccggaggggc ggttggtcac gacgaccgtg ccgccatgat cctcaaccgt
     4441 gcgctccacg atggagagcc ccaggccggt cccccctgcc cgacgggt
//
LOCUS       DASWKS010000354         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2418972, whole genome shotgun sequence.
ACCESSION   DASWKS010000354 DASWKS010000000
VERSION     DASWKS010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2418972"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VGA78_10160"
     CDS             complement(<1..225)
                     /locus_tag="VGA78_10160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894277.1"
                     /translation="MKDPLYYNCSATPNLLQGLPICPVPSAWLARRGLLPRVADLPAG
                     RQEGFGSYRGSGSYPGSGRIRNPSLRAASRR"
     gene            253..522
                     /locus_tag="VGA78_10165"
     CDS             253..522
                     /locus_tag="VGA78_10165"
                     /inference="COORDINATES: protein motif:HMM:NF013561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HEX9894278.1"
                     /translation="MPLTVRLDTETQHALDEVTGRLGESRSAVIRQAIRLLRDRVMAE
                     EQGRTPYELGEELFGKYHSGHGRLSEERTAREHIVTTLHDREVGR"
     gene            542..922
                     /locus_tag="VGA78_10170"
     CDS             542..922
                     /locus_tag="VGA78_10170"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEX9894279.1"
                     /translation="MVALFDADDGAHTDCLTALKGERGPLVTCWPVLTEAFYLLGPDR
                     QVQERLWTWLLSGAVRVQDLDHEGMVRCRELMGQYGDLALDLADAALVATCERLNITR
                     VLTTDRRDFHAIVPTHTAHFELLP"
     gene            complement(1050..1238)
                     /locus_tag="VGA78_10175"
     CDS             complement(1050..1238)
                     /locus_tag="VGA78_10175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894280.1"
                     /translation="MAPHISPAVKPRYLAAAVPEDALPDRKMAFIRAWIADLPAGRQE
                     GFGFYRGSGSAPRSPNRG"
BASE COUNT          269 a          505 c          505 g          251 t
ORIGIN      
        1 cctccgggag gccgcacgca gcgaggggtt ccggatcctt cccgagccag gatagctccc
       61 ggaaccccgg taggaaccga atccctcctg cctgccggca ggcaggtcgg cgacccgagg
      121 cagcaggccc cgccgtgcca accaggcgga cgggacggga cagatgggca atccttgcag
      181 gaggttgggc gtcgcactac agttgtaata cagtggatct ttcacctggc cacaagattc
      241 ccggaagaca agatgcccct cacagttcga ctcgacaccg aaacccaaca cgcccttgac
      301 gaagtcaccg gtcggctcgg ggagagccga tccgcagtca ttcgccaagc gatccgcctg
      361 ctacgcgacc gggtgatggc ggaagaacag ggtagaactc cctatgagtt gggagaggaa
      421 ttgtttggga agtatcacag cggccacggc cgtttgtcgg aggagaggac ggcgcgggag
      481 cacattgtga cgaccctcca cgaccgcgag gtcggtcggt gaccggcctg gacacggacc
      541 gatcgttgcc cttttcgatg cggacgatgg cgcccacacc gactgtctca cggccctcaa
      601 gggggagcgc ggaccgctgg ttacctgctg gccggtgttg acggaggcct tttacctact
      661 gggtcctgat cggcaggttc aagagaggct gtggacctgg ttgctctccg gcgccgtccg
      721 tgtccaggat cttgaccatg agggaatggt ccgctgccgt gagctaatgg gccagtatgg
      781 cgacctcgcc ctggacctgg ccgatgcggc gttggtcgcc acctgcgagc ggctaaacat
      841 cacgcgggtc ttgacaacgg accgccgaga ctttcacgcc atcgtcccga cccacacggc
      901 ccacttcgaa ttgctgccgt aggccaccca cgggatcgat ccctaccggc gagagaatcg
      961 ccttcggcga ccccggcccg aacggcccgg ccacgccagc ggcgtcgcct tgccgcgcca
     1021 ccggcgcgga tcgccggtgc aaccggctcc taccctcggt tgggagatcg cggcgcgctc
     1081 ccggaacccc ggtagaagcc gaatccctcc tgcctgccgg caggcaggtc ggcgatccag
     1141 gccctgatga aggccatctt gcgatcgggc aaggcgtcct cggggaccgc agcggccaga
     1201 taacggggct tcaccgcggg agagatatgc ggggccatgg taccttctca gcgaattgat
     1261 aactggtcgc gaccgattat cagttcggtg agggcacgca tgtccagcgg tgtcttttcc
     1321 ggatcctcag gtacctccca tcagaccgcc gggcctgccg ccggtctgcg tgcggacccg
     1381 cacaggcaag cgccgacggt gcccggttgc cgcgcctaac ggcgcgggtc gccggtgcac
     1441 cggctcctac gggaggatcg ccgggcgctg gggaacacct cttataggag cggccttggc
     1501 cgcgaacccg ggattccgtg tggctctgtc
//
LOCUS       DASWKS010000355         8219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1283231, whole genome shotgun sequence.
ACCESSION   DASWKS010000355 DASWKS010000000
VERSION     DASWKS010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283231"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1287)
                     /locus_tag="VGA78_10180"
     CDS             complement(13..1287)
                     /locus_tag="VGA78_10180"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9894281.1"
                     /translation="MSALTYFAVQRLRGGVHPDQIREARRLLDAGGATLAAHARSRLA
                     AIHGPAAEQPAWLERQPLTLRTDLTEPHRQLLAGHPKHTEIRRTSGSTGTPFTFVKDK
                     AMAAWMDATMWAAYSWHGVGPGDRRLRFWGLALKGKVRWRRQVADLLTRQIRLSAFQV
                     TPADCQEFFLRARRFKARYAYGYPALMVLWADECAALGLDGRDLELHAVIATGELLPP
                     ETRRRLTEFFGCNVVNEYGCSESGVLAFECEAGTAHTTPVAALPEVIRPDGTVAGPGE
                     LGEVVVSDLYGRYLPMLRYRLHDLAVPTRQDTCRCGRVLPGLEISVGRQDSFIELADG
                     RRIYDAILAYSVPAGVSGFRVFQRSSRRLEAQVTLARGVDREATLRALSRSWSAALGT
                     GLELEIQVVESLPFEDSGKLRYFVPLRPRDVA"
     gene            complement(1284..2264)
                     /locus_tag="VGA78_10185"
     CDS             complement(1284..2264)
                     /locus_tag="VGA78_10185"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9894282.1"
                     /translation="MPNRPSVSVIMPVRDKKDFLVECLDTVLPAVHAYGAELITVDNG
                     STDGAWEVLSDRLRGQAVLLRSDSPTVAGVRNLGASCATGSIFCFIDSDCAVPADYLD
                     RVVAVLAATGAGAVGHKVSFPDRSWIERCWHNLHFIVEEGGTRWLPGACFSVTAEAFH
                     KVGGFRDDLVSGEDIELAARLARGGFLVWSSPRLIITHLDNPDSLASFYRKEVWRGQG
                     VSASGSVFLNRVLVMTFAHLVLCALAVIGLFLAPGRIAARVGLALVLVFLVPVVSVAF
                     RIRQVRRGGMRPRWWRELLPSAVLYGVYYLARGWAAIRVWSSGRRSSTAP"
     gene            2330..3385
                     /locus_tag="VGA78_10190"
     CDS             2330..3385
                     /locus_tag="VGA78_10190"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEX9894283.1"
                     /translation="MPSIVAVGDLMLGDTAAAPGFGFASRLGARRLAEVFHDVAPLLD
                     GADVVFGNLEVILSLEGYVPDRLASRHMRGWPRFALELKDLGFTVLNVANNHANQHGT
                     GAFLETCRLVESAGIGVCGIRGTAPWCSKPLVLHAGGERVGFLGYCLHPRRYFPDQTP
                     PFAEGSLGEIVSDISRFRPQVDSLCVSLHWGEEFVPQASEDEAAWGEAMVAAGATVVL
                     GHHPHVVRRADLRSGRLVALSLGNFASDLVWDDLMSEGVVLRCGVERGTVTHVELHRT
                     RVNGRYQIRIDPRESRGLLPLPPLPKEEYHRQARRLDGVMRRRRLLHLTRSLVRADWR
                     LLRQWVTGVVKGRLRGA"
     gene            complement(3453..6698)
                     /locus_tag="VGA78_10195"
     CDS             complement(3453..6698)
                     /locus_tag="VGA78_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894284.1"
                     /translation="MGSVVQADVDWSATGGTIGPDGVFVSDQLGQFQVTAKLRTNAAI
                     ADSARVSVFLHPTDIVKLTVTPNGMEVTVGEGLQLEAVAELADGRTVRQPPLAWTAAA
                     GEVDGSGYYVAPEVEGVFAVQAAAGSGVKGEAAIRVKNSRRTLGSVQVSPADATLLPG
                     QTARFSAMGTYDDGSARAVQVVWSSTGGSIGGDGWFTAGSSAGTFRVIARFRQGTQAD
                     TAVVRIEEPQIVGLQISPDGSALTTGASQTYVATARMSDGSSKAVGARWEATGGSINS
                     GGLYTAGSSAGSYRVVGSVAGTSAADTAAVTVSAPVVALTAVILNPSSASVPVGTSRQ
                     FNVSGTWSDGSTQTPPVVWSATGGSVSTGGLYQAGNAPGTYLVIATSPAWGKADTATV
                     VVGAPELLTLTIDPASASVLPGQSRQFSVGGSWSDGSSTTPLVNWIAGGGIITSAGLY
                     TAGSNPGTFQVVAVHSSGNADTSLVTIAPPPPSLLSLSLTPTSANLAPGSPAQFSVSG
                     AWSDGGSGTPSVTYSSTGGSISAGGLYTAGSVAGTYRVIAQHTGGTLADTSTIVVSVS
                     APTLTVLTIAPKTTSLQTGGTRQFSVSGTWSDGSTTPPAVAWTTNVGTVTNAGLYVAP
                     ATTGTYRVIASQVGGSRADTATVTVTAAVTIVALEVTPDQKNMQPGQTQQYSAQATYS
                     NGGTGTPTMSWSSSGGLVTSGGLYTAPAAAGGYLVIAQASGSTLRDTAQVTVSAPSTG
                     GTTVTVTPSTLTLDIGEVYQFAALARLSDGSTQTTGLIWSTTGGGLVDGTGQYRAPRT
                     AGIYPVTVQHSSGATSQATVTVVVPSAPYFSDSFDGCGSLNKTANAAGFRWADTQGGV
                     GEDPGISSAIARSGSCSLKFTFVGSSNMADDSWSEQRFAFGKKLSEVYVGWYQYFPSG
                     LESPAVGPKFVHRNDPNGPDNNKLLRLWDEDYSQYNVKAGFSMLPSSTGDGQLNTEYI
                     WRSANGSGNSVANVGPWTGIVTNATRGTWAKFRVRMKLATSATANDGIVQLWLNDVLT
                     ANFTTLPLYTAQAGAKNWIRNGYIMGWSNSGFTQTTHTYIDDFVISGNPIP"
     gene            complement(7181..>8219)
                     /locus_tag="VGA78_10200"
     CDS             complement(7181..>8219)
                     /locus_tag="VGA78_10200"
                     /inference="COORDINATES: protein motif:HMM:NF025464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heparin lyase I family protein"
                     /protein_id="HEX9894285.1"
                     /translation="ISPKTVSLDVGEVFQFSAVSGPDSAVTWSTTGGAITPSGWFRAP
                     GEAGTYLVALHQPNGQSDTAVVTVQEPVAPYFSDSFESCQLSHADSTGFGWAESRGTP
                     SDQPVVSNLIARSGVCSLKFTFPAGGPGADGWSEQRFVFGKKLSEVYLGWHQYFPTGL
                     EVPAIGPKFKHRNDPSGPDNNKLLRLWGEDYTDYDVKAGFSMLPRGGLDEDSQLNTEY
                     MRRGATGSKMAVANIGPWTKVVGSDTRGRWVKFLVRMKLAASPTANDGVLQLWLDDVL
                     VADYSSLPLYSSRNGAKNYIRHGYLMGWANSGFTERSTTYIDDVVISRRSDPLGFVNG
                     PHDDVTSSPLQ"
BASE COUNT         1421 a         2678 c         2676 g         1444 t
ORIGIN      
        1 tgttagcaac cgtcatgcca cgtccctagg gcggagcgga acaaagtacc gcagtttgcc
       61 ggaatcctcg aacggcagcg attcgaccac ctgtatctcc agctccaagc cggtgcccag
      121 cgcagcgctc cagctacggg agagggcccg gagtgtagcc tcacggtcga cgccccgagc
      181 cagggttacc tgcgcctcca acctccggct gcttcgctga aagacccgga aacctgacac
      241 gccggcgggg actgaatagg caaggatcgc gtcgtagatg cgccgcccgt cggccaactc
      301 gatgaaactg tcctgtcttc cgaccgaaat ctcgagtccc ggcaacacgc gtccacaacg
      361 acaggtgtcc tgacgggtag gcacggccag gtcgtgcagc cggtaacgca gcatgggtag
      421 gtaccggccg tacagatcgg acacgaccac ctcgcccagt tcaccgggac cggccacagt
      481 accgtccggc cggatgactt cgggcagcgc ggccaccggc gtcgtgtgcg cggtgccggc
      541 ttcgcattcg aaggccagga ccccgctctc tgaacagccg tactcgttga ccacgttgca
      601 cccgaagaac tccgtcaggc gacgtcgtgt ctcgggcggg agcaattcgc cggtggcgat
      661 gacggcgtgc aattcgaggt cgcgaccgtc cagtccaagc gccgcacact cgtccgccca
      721 gagcaccatc agggcgggat agccgtaggc gtaacgtgcc ttgaagcgcc gggcgcgaag
      781 gaagaactcc tgacaatcgg ccggggtaac ctgaaacgcg ctcaagcgaa tctgccgggt
      841 cagcaggtcg gccacctgac ggcgccaccg taccttcccc ttgagcgcca gaccccagaa
      901 ccggagccgc cggtctcctg gaccgacgcc gtgccaggag taggcagccc acatggtggc
      961 gtccatccag gccgccatgg ccttgtcctt gacgaacgtg aacggcgtgc cggtggaacc
     1021 gctggtgcgg cggatctccg tgtgcttcgg atggccagcc agcaactggc gatggggctc
     1081 cgtcaggtcg gtccgaagcg tcaacggttg gcgttcgagc catgccggct gctccgccgc
     1141 cgggccgtga atcgccgcca gacgggagcg agcatgggcc gccagggtcg ctccccctgc
     1201 atcgaggagc cggcgcgcct cgcggatctg gtcggggtga actccgccgc gcagccgttg
     1261 gaccgcgaaa taggtcaggg cgctcatggg gcggtggagc ttcgtcgccc ggaagaccag
     1321 acccggatcg cggcccaccc ccgggccagg tagtacacgc cgtacaggac cgcgctcggg
     1381 agcagctcac gccaccatcg cggtcgcatc ccgccgcgac gaacctgccg gatccgaaaa
     1441 gctaccgaaa ccaccggcac caggaatacc agcaccagcg ccaggcccac ccgggccgca
     1501 atcctcccag gcgcaaggaa gaggccgatc accgccagcg cgcatagcac cagatgggcg
     1561 aacgtcatga ccagcacccg gttgaggaag acgctcccgc tcgcgctgac accctgcccg
     1621 cgccacactt ccttgcggta gaagctggcg agactgtcag ggttgtcgag atgcgtgata
     1681 atgaggcggg gagagctcca caccaggaat ccgccgcgcg cgagccgcgc cgccagctcg
     1741 atgtcctcac cgctcaccag atcgtcccgg aagccaccga ccttgtgaaa cgcctcggcc
     1801 gtcacgctga agcatgcacc ggggagccag cgggtacctc cttcctcaac gatgaaatgc
     1861 agattgtgcc agcagcgctc aatccacgat cggtcgggga aactcacttt gtggccgacc
     1921 gccccggctc cggtcgccgc caataccgcc accactcgat cgagataatc cgccggcacc
     1981 gcacagtcgg agtcgatgaa acagaaaatg ctgcctgtgg cgcaggaggc tcccaggttt
     2041 cgcaccccgg ccacggtggg tgaatcgctt cgaagcaaca cagcctggcc gcgcagtcgg
     2101 tcactcagca cctcccacgc accatcggtc gaaccattgt cgacggtaat cagctcggcg
     2161 ccgtacgcgt gaaccgcggg aaggaccgtg tcgaggcatt cgacgaggaa gtccttcttg
     2221 tcccggaccg gcatgatgac ggaaacgctg ggtctgttgg gcacagggca ggctgtatgg
     2281 taattggggg tcgggcgtcc tgtcgcgccc aaagctatct tcgtgccaca tgccctccat
     2341 cgtcgccgtt ggtgatctca tgctcggaga caccgcagcc gcgcccgggt tcgggttcgc
     2401 cagccggctg ggagcacggc ggttagcgga ggtcttccac gatgtggctc cgttgttgga
     2461 cggagctgac gtggtgttcg gcaacctcga ggtcatcctc tcgcttgaag gatacgtccc
     2521 ggatcggttg gcctcgagac atatgcgggg gtggccgcgc tttgccctcg agctcaagga
     2581 cctgggcttc accgtgctta atgtcgccaa taaccacgcc aatcagcacg ggaccggcgc
     2641 cttcctggag acctgtcgtc tggtggaatc ggctgggatc ggtgtctgcg gcatccgcgg
     2701 aaccgcgccc tggtgctcga agccgctggt gctgcacgcc ggaggagaac gggtcggatt
     2761 cctcggctat tgcctccatc ccagacggta ctttcccgat cagacgcctc cctttgccga
     2821 gggcagtctg ggagaaatcg tttcggacat cagccggttt cgtccccagg tcgattcgct
     2881 ttgtgtgtcg ctccactggg gtgaagagtt tgtgccccag gcgagcgagg atgaggcggc
     2941 ctggggcgaa gcgatggtcg cggcgggcgc aacggtggtg ctggggcacc atccccacgt
     3001 ggtccgacgg gctgatctgc gcagtggacg cctggtggcg ctcagccttg gcaacttcgc
     3061 cagtgacctg gtgtgggatg acctcatgtc cgagggagtc gtcctgcgtt gtggggtgga
     3121 gcgcggcacc gtaacccatg tggagctgca ccgaacccgg gtgaatggcc gttatcagat
     3181 ccggatcgac cctcgggaaa gccgtggcct gctgccgctc cctcccttac cgaaggaaga
     3241 gtaccatcga caggcgagac gtctcgatgg cgtcatgcgc aggcgtcgcc tgctacacct
     3301 gacccgtagt ctcgtccggg ccgattggcg gctgctccgg caatgggtca cgggcgtggt
     3361 caaagggcgg ctacgcggcg cgtgatccga cgctaccaat gccgccgccg catgccctgg
     3421 aggacatgcg gcgcgtttgg gacccctcga attcagggga tcgggttgcc ggagatgacg
     3481 aaatcgtcga tgtaagtgtg cgtggtctgg gtgaacccgc tgttggacca gcccatgatg
     3541 tagccgttgc ggatccagtt cttggccccc gcctgggcgg tgtagagcgg cagggtggtg
     3601 aagttggccg tcaggacatc attcagccac agctggacga tgccgtcatt ggcggtggcg
     3661 ctggtcgcca gcttcatgcg gacccgaaac ttggcccagg tgccccgggt ggcgttggtg
     3721 acgatgccgg tccaggggcc gacgttggca accgaattcc cgctgccatt ggcgctgcgc
     3781 cagatgtact cggtgttgag ctgcccgtcg ccggtgctgc tgggcagcat gctgaagccg
     3841 gccttcacgt tgtactggct gtaatcctcg tcccacagcc gcaacagctt gttgttgtcg
     3901 ggcccgttgg ggtcgttgcg gtgcacgaac ttgggcccca ccgcgggcga ctccagcccg
     3961 ctcgggaagt actggtacca tccgacatag acctcgctca gcttcttgcc gaaggcaaac
     4021 cgctgctcgc tccagctatc atccgccatg ttgctgctgc cgacgaaggt gaacttgagg
     4081 ctgcaggagc cgctgcgggc aatggcggag ctgatgccgg gatcttcgcc gacgccgccc
     4141 tgggtgtcgg cccagcggaa gccagccgcg ttggcggtct tgttgaggct gccgcagccg
     4201 tcgaagctgt cgctgaagta gggggccgag gggaccacga cggtcacggt ggcctggctc
     4261 gtggccccac tgctgtgctg cacggtcacg ggatagatcc cggccgtccg gggtgcccgg
     4321 tactggccgg tgccgtccac caggccgccg cccgtggtgc tccagatgag cccggtggtc
     4381 tgggtcgagc cgtcgctcaa gcgggccaag gcggcaaact gatagacctc cccaatgtct
     4441 agcgtgaggg tcgagggggt caccgtcacg gtggtaccgc ccgtggaggg cgcgctcacc
     4501 gtcacctgcg ccgtgtcccg gagggtgctg ccggacgcct gggcgatcac cagatagccg
     4561 cccgccgcag cgggcgccgt gtacagaccg ccagaggtga ccaacccgcc tgacgagctc
     4621 cagctcatcg tgggcgtccc ggttccgccg ttggaatacg tcgcctgggc gctgtactgc
     4681 tgggtctgcc cgggttgcat gttcttctgg tcgggcgtca cctccaacgc gacgatcgtc
     4741 acggcggcgg tcacggtcac ggtcgccgtg tcggctcggg atccgccgac ttggctggca
     4801 atgacgcggt aggtccccgt cgtcgctggt gcgacatata gtccggcgtt ggtgacggtt
     4861 ccaacgttcg tcgtccaggc aacggcgggc ggagtcgttg atccatccga ccaggtgccg
     4921 ctcacgctga actggcgggt gccgccggtc tgcaggctgg tcgtcttcgg cgcgatcgta
     4981 aggaccgtga gggttggtgc ggaaacgctc accacgattg tggacgtgtc cgccagggtg
     5041 ccgcccgtgt gctgtgcgat cacccgatag gtccctgcca cgctacccgc ggtgtacaag
     5101 ccacctgccg agatgctgcc accggtcgag gagtaggtaa cggaaggcgt gccgctacct
     5161 ccgtcgctcc aggccccgct gaccgagaac tgcgcaggac tgcccggcgc gaggttggcg
     5221 ctggtcggcg tcaaggacag cgacaagagg gacggcggcg gcggcgcgat ggtgaccagg
     5281 ctggtatcgg cgttgccgct cgagtgcacg gccacgacct ggaaggtgcc ggggttgctg
     5341 ccggcggtgt agagaccggc cgaggtaatg atgccaccgc cggcgatcca gttgaccagc
     5401 ggagtggtgc tgctcccatc gctccagctg ccacccaccg agaactggcg cgactgtcct
     5461 gggagaaccg aggcgctggc cgggtcgatg gtcagcgtca gcagttccgg tgcgccgacc
     5521 acgacggtag cggtatcggc tttcccccag gcaggggacg tggcgatcac caggtaggtg
     5581 ccgggagcat ttccggcctg gtacaaccca ccggtgctca cgctcccacc ggtggcggac
     5641 cagacgaccg gaggcgtctg ggtgcttcca tcgctccagg ttcccgagac gttgaactgc
     5701 cggctggtgc ccaccggcac cgacgcgctg gacggattga gaatcacagc ggtgagggca
     5761 acgaccggag ccgagacagt cacggctgcc gtgtccgctg ccgaagtgcc cgcgaccgac
     5821 ccgaccacgc ggtacgagcc ggcggaggag cccgcggtgt aaagaccgcc cgagttgatg
     5881 gagcctccag tggcctccca tcgcgccccg accgccttgc tggatccgtc gctcatgcgg
     5941 gccgtcgcga catacgtttg cgacgcgccg gtggtaagag ccgaaccgtc gggagagatc
     6001 tgcaagccca cgatctgggg ctcttcgatt ctgacaaccg cggtgtcggc ctgggtacct
     6061 tgcctgaacc gcgcgatcac ccggaaggtc ccggcgctcg atcccgcggt gaaccagcca
     6121 tcgccaccga tcgaacctcc ggtcgagctc cagactacct ggaccgcccg cgcgcttcca
     6181 tcgtcgtaag tgcccatcgc gctgaaccgg gcggtctgac ccggaagcaa cgtggcgtcg
     6241 gctggactga cctggaccga accgagcgtc cggcgagagt tcttgactct gatggccgct
     6301 tcccccttca cgccggagcc tgccgcggcc tgcacggcaa agacgccttc gacctcgggg
     6361 gcaacatagt atccgctgcc gtccacttct ccggccgcag cagtccaagc caggggcggc
     6421 tgccgtacag ttcgtccatc ggccagctcg gccaccgctt cgagctgaag tccctcgccc
     6481 actgtcactt ccatcccgtt gggagtcacc gtcagcttga cgatgtcggt ggggtgcagg
     6541 aagacggaga cccgcgccga gtcggcaatc gctgcgttgg tccggagctt cgcagttacc
     6601 tggaactgac ccagttgatc tgagacgaaa acgccatcgg gtccaatcgt cccccccgtg
     6661 gcggaccaat cgacgtcggc ctggaccacg ctacccacca agttccgggg agtggccgaa
     6721 aaccggatga tctcgccggg tcgaacagta ccgactttgg gttcgattga gagggaagta
     6781 accacagacg gctgaggatt gttcggactc aggaactccc ggtcctcagg ggtggtacag
     6841 gctgcaagcg ccagagcgac ccctgaggag aatcgtgcgg ccagcgccag acgcttggcg
     6901 agtttcgaca gatagatcat gcctgttctg tcctttgatg cgacgccggc tggtccggag
     6961 tcgacgactt accggtgaga attgctggct tcgggtcgca aatcgagggc catgatggtg
     7021 ttccgcaact ttacagtagg tcttgtcacg ggctatagct ataaacctaa tggagcattg
     7081 aacttatgct gctgttgcgg aggtgcggca gggctcgatt accgagaaat tacgcgcttc
     7141 aaggctgggg aatccaaaga aaactgcccg cccgtgcagc ttattgaagc ggcgagctgg
     7201 tcacatcatc gtgcggcccg ttcacgaacc ctagaggatc ggaacgcctc gagattacca
     7261 cgtcatcgat gtaggtcgta gatcgttcgg tgaacccgct gttggcccac cccatcaagt
     7321 acccgtgccg gatatagttc ttcgccccgt ttcgggagct atagagcggc aggctggaat
     7381 agtcggcaac cagaacatcg tccagccaga gctgcagcac cccgtcgttt gctgtggggc
     7441 tggcagccag cttcatcctg accaggaact tcacccaccg cccccgagtg tcgctgccca
     7501 ccaccttggt ccaaggccca atgttggcca ccgccatctt gcttccggtc gcaccgcgtc
     7561 gcatgtattc ggtgttgagc tggctgtcct catccaaccc gcccctcggc agcatgctga
     7621 acccggcttt cacgtcgtag tccgtgtagt cctcgcccca tagcctcaac agcttgttgt
     7681 tgtccggacc ggatgggtcg tttcggtgtt tgaatttggg acctatggcc ggcacctcta
     7741 gccccgtggg gaaatactgg tgccatccca ggtagacttc gctcagcttc tttccgaata
     7801 cgaaccgctg ctcgctccag ccatccgctc ctggtcctcc cgctgggaag gtgaacttga
     7861 ggctgcagac ccccgagcgc gcgatgaggt tcgagaccac cggctggtcc gacggagtac
     7921 cccggctctc ggcccacccg aaaccggtgc tgtcggcatg gctcaattga cagctctcga
     7981 agctgtcact gaaatagggc gccactggct cctgcaccgt cacgactgct gtatcgctct
     8041 gcccgttcgg ctggtgcagg gccaccaggt acgtcccggc ctctccgggt gcccgaaacc
     8101 acccagatgg ggtgatggct ccgccggtgg tggaccacgt gacggccgaa tccggacccg
     8161 atacggcgct gaattggaac acctcgccca catccagaga cacggtctta ggggaaatc
//
LOCUS       DASWKS010000356         7324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3153036, whole genome shotgun sequence.
ACCESSION   DASWKS010000356 DASWKS010000000
VERSION     DASWKS010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7324
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3153036"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..1337
                     /locus_tag="VGA78_10205"
     CDS             132..1337
                     /locus_tag="VGA78_10205"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9894286.1"
                     /translation="MPHTEQTTVTLFEKCLAYTKAEEVKALGLYPYFKPISASEDTVV
                     VIEGQRRIMLGSNNYLGLTHHPKVLEAASRALHMYGSGCTGSRFLNGSLDLHVQLERA
                     LAEFLGKDDCIVFSTGYGANLGLISGILGRNEVVFLDKQDHASIVDGAKLSFGVTERF
                     PHANYEVLERLLQRHDPSRGRLVVVDGVYSMEGDIADIPELVRICRKYNAALAVDDAH
                     ALGVLGPQGDGTGAHHGMQDEVDLIVGTFSKSLASVGGFVAGSERVINYLRHHSRPFI
                     FTAALPPSNTAGVLAALEVMKREPERRERLWHNTRRLAEGLRSLGYEIGPTETPIVPV
                     LIGPLDRTLIMWRKMYDAGVFTNPVVPPAVPQSQCRLRTSLMATHTDEQIDMCLDAFA
                     RIGKELEAI"
     gene            1442..2467
                     /locus_tag="VGA78_10210"
     CDS             1442..2467
                     /locus_tag="VGA78_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894287.1"
                     /translation="MRRDVAALLDRRSNPFFEHGKAEYFLALRGEEVVGRIAAISNRL
                     HNEYHGDRVGFFGFFESIQDQTVAAALFDAVAGWLKLEGHDTMRGPASFSTNDECGLL
                     VWGHDTPPTLMMPHNPEWYASLLEQAGFLAVKDLLVYQGGSEAGLPVPERLTRAVDLV
                     TRRLGLTIRPLDTSRFRAEVELVKSLYNQCWERNWGFIPMTDAEIEHLAQQFRPVVVP
                     DMVPIVEVNGRPIGFALALPDLNAVFRSNRRGYLLPVLPHLLWSLKREKLRRARILLL
                     GIVPEWRGKGVDAVLYHWIWTRAGQHNMTWGEAGWILEDNPAMNAGLLKMGFVHYKTL
                     RMYDSPL"
     gene            2483..3454
                     /locus_tag="VGA78_10215"
     CDS             2483..3454
                     /locus_tag="VGA78_10215"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9894288.1"
                     /translation="MATALVTGGTGFVGSHLIEALLGRGDRVRALVRSPAKAEALGFS
                     GVEWLPGDLDDRPALDRASRGAEVIYHAAGLVAVRSDAEGMAANRDGTERLIDSARDT
                     GARVVFVSSLAAGGPSEPGRPASGNETSHPVTAYGRSKLAAEAVVRSGPLPWVIVRPP
                     AVYGPRDRELFRVFRGIARYGVAPVFGRGEQQLSLVYATDLAQAIVAAGTVAGAAGQT
                     FCPAHPEVVTSSELVRAIAEAARRRLRIIRIPVPIGRIMLHATGAVAGLTGRTTLLNR
                     DKGNEFFAPGWTCDPTPFERISGWRAAFDLPAGAAATFQWYRQAGWL"
     gene            3445..4299
                     /locus_tag="VGA78_10220"
     CDS             3445..4299
                     /locus_tag="VGA78_10220"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX9894289.1"
                     /translation="MVVIPLKLIDRLMLIYLGIVTLLALIRLDQRPYGLWVIGANLLT
                     VGLIWLLHLPGLGPLGRTVRDIYPVLLLPALYGALDLLNGIDVRVWDSEVQRIEAGLF
                     GGQVSRDWWRRSPSGFWSTALHATYFAYYFIVPFPALFFLWRRERERARNAVTMIVAT
                     FLCCYLVFLLLPVAGPYYEFPRPDGAFVDNWAARMVYGILSVGSSYGAAFPASHVAAM
                     AAATISTWMGSRGAGLALLVPTLLLAVAVVYCQMHYAVDAIAGLVVPIPIALAVWRAA
                     GRTDGLTD"
     gene            complement(4426..4878)
                     /locus_tag="VGA78_10225"
     CDS             complement(4426..4878)
                     /locus_tag="VGA78_10225"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX9894290.1"
                     /translation="MRKLSMAGLALVVAACGGGGEQQQQAAQPEAPAPAPAAGASHDV
                     NMVLEGTAYKYVPDQLTIKIGDQVVFHNVSGGPHNVQFWADSIPAGSAEPLSTGMPDP
                     MSPLAGPLIVDPNGTYTVKFANTPVGEYKYYCLPHLANKMTATITVTQ"
     gene            5024..5824
                     /locus_tag="VGA78_10230"
     CDS             5024..5824
                     /locus_tag="VGA78_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894291.1"
                     /translation="MSSAPPPCRQMGRQCRALNVTLRVSADLEAPSDGDDEATWLLGH
                     TQRITFRRLWRHREDLFARVTLHVPCKYLSENGSGACCDAWGYRGQVAPSEARHQARQ
                     FPNDEFRIVENGRVTTRQLRQPAPTKRQLAVLNVNPCATARCRTSDNTIGAACCRDLQ
                     IEIMCDERWTRQDLLVRSRQSPYLCKVERERPDSLEVEVISACGYLGPDGVACTLHGR
                     RRPDGSVAKPALCRRWPKPTKDETLHPGCVYQKSVEGGRRVSKEVGAG"
     gene            5948..6460
                     /locus_tag="VGA78_10235"
     CDS             5948..6460
                     /locus_tag="VGA78_10235"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894292.1"
                     /translation="MADELERLYQTMYASVVRFLYRKVWDQDRAEDLAQEVFIRAMAH
                     RPEKPRAWIFAVASNLARDEARAAVRRKKHLTLLTNDPVTLARPATGADDVVEQEEEL
                     AQVQFALDALSARDKEVLLLWDAGLSYQEIAQQTGLALGAVGTTLARARRRLVEAYDR
                     TEVKERAAHS"
     gene            6444..>7324
                     /locus_tag="VGA78_10240"
     CDS             6444..>7324
                     /locus_tag="VGA78_10240"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9894293.1"
                     /translation="MRHIPEEELHAYLDQALSRSQCIEIETHLADCYACQRDRDAIAA
                     LRDRTTRLLGLAAPARARAPAWTELEGQAVARRQQRPWRRVGVWAASVAGAVLAGWGL
                     RTLSYPHPTPLALRPQAPAIFAVNPTPVPVQTIALEPARAPDPTADLGSSDDGVRLVG
                     TIRRPAPVTPASIPAANRALSLTGDWTSVTLAEAEDVSGGLVPRVSELPVAQVQLRRT
                     GDGRPLLLVTQTDPSGERIYTIEGPVDQVADLISAQLRTGSGFGSSEPSRSLPDYVNV
                     NGYVQRTSRVLAVVGRLS"
BASE COUNT         1172 a         2432 c         2421 g         1299 t
ORIGIN      
        1 tgaagaatac cgtgttgcga ccctgcaacc aacctgtggc aggttcgctt gtggtcccgg
       61 gccccacaaa ttaagttaag ttgttgcgtg acttgactgt cggtcggacc gtccatcctc
      121 tgcgagggac cgtgccccac actgaacaga ccaccgtcac cctgttcgag aagtgcttgg
      181 cgtacaccaa ggccgaggaa gtgaaggctc tcggccttta tccgtatttc aagcccattt
      241 cggcctcgga agacaccgtg gtcgtcatcg agggacagcg gcggatcatg ctcgggtcga
      301 acaactacct gggcctgacc caccacccca aggtcctcga agcggccagc cgggccctcc
      361 atatgtacgg gtcaggctgt accgggagcc gctttctcaa tggatcgctc gatctccatg
      421 tccaattgga gcgggctctg gccgagtttc tcggcaaaga cgactgtatc gtcttctcca
      481 ccgggtacgg cgccaacctg ggcctgatct ccggcatcct gggccggaac gaggtggtat
      541 tcctggacaa gcaggaccat gcctccatcg tggacggcgc caagctgtcc ttcggagtga
      601 ccgagcggtt cccgcatgcg aattatgagg tgctggagcg cctgctgcag cggcacgatc
      661 cgtcccgggg acggctggtg gtcgtggacg gggtgtactc catggaaggc gacatcgccg
      721 acatccccga gctggtgcgg atctgccgca agtacaacgc ggccctggcg gtggacgatg
      781 cccacgcgct tggggtcctc ggtccccagg gcgacggcac cggggcgcac cacgggatgc
      841 aggatgaggt ggatctcatc gtcggcacct tcagcaagtc ccttgcctcg gtgggcggct
      901 tcgtggcggg ttccgaacgg gtgatcaact atctccggca tcacagccgg cccttcatct
      961 tcacggccgc cctgcctcct tccaacacgg cgggcgtgct ggccgcgctc gaggtgatga
     1021 agcgggaacc cgaacggcgc gaacggttgt ggcacaacac gcggcggttg gccgagggcc
     1081 tgcggagcct gggctacgag atcggtccca ccgagactcc tatcgtcccg gtgctgatcg
     1141 gtccgctcga ccggaccctg atcatgtggc gcaagatgta cgacgccgga gtgttcacca
     1201 acccggtggt accgcccgcg gtccctcagt cccagtgccg gctcaggacc agcctcatgg
     1261 cgacccacac cgacgagcag atcgacatgt gtctggacgc cttcgctcgg atcgggaagg
     1321 agctggaggc gatctgacca ccccggtcgc cgtccgcccc gtccgatcgg gcgcggacct
     1381 tcgcaggttc atcggccttc catatcgact ccacgcgcgg gaccccctct gggtcccgcc
     1441 gttgcgtcgg gacgtggcgg cgctgctcga ccgccgcagc aatccgttct tcgagcacgg
     1501 caaggcggag tacttcctgg ccctgcgagg cgaggaagtg gtggggcgga tcgcggccat
     1561 cagcaaccgg ctccacaatg agtatcatgg cgatcgagtc ggcttcttcg gcttcttcga
     1621 atccatccag gaccagaccg tggcggccgc cctgttcgac gcggtcgccg gctggctgaa
     1681 gctcgagggg cacgacacga tgcgggggcc ggcctcgttc tccaccaacg acgaatgcgg
     1741 cctgctggtg tggggccatg acactcctcc cacgctgatg atgccgcaca acccggagtg
     1801 gtacgcctcg ctgttggaac aagccggctt cctggccgtc aaggatctgc tggtctacca
     1861 gggcggaagc gaggcggggc ttcccgtacc tgagcgcctg acccgcgccg tcgacctggt
     1921 gacccgccgg ctcggcctca cgatccgtcc ccttgacacc agtcgcttcc gggccgaggt
     1981 ggagctggtc aagtcgctct acaatcagtg ctgggagcgg aactggggct tcatccccat
     2041 gaccgatgcc gagatcgaac acctggcgca gcaattccgg cctgtggtcg tgcccgacat
     2101 ggttcccatc gtggaggtga acggccggcc catcggattc gcgctggcgc tcccggatct
     2161 gaatgcggta ttccggtcca accggcgtgg ctacctgctc ccggtcctgc cccacctgct
     2221 ctggtcgctc aagcgcgaga agctgaggcg cgcccgcatc ctgctgctcg gcatcgtccc
     2281 cgaatggcgg ggcaagggcg tcgacgcggt gctgtatcac tggatctgga cccgcgccgg
     2341 gcagcacaac atgacgtggg gcgaggccgg ctggatcctg gaggacaatc cggcgatgaa
     2401 cgccgggctg ctcaagatgg gtttcgtgca ctacaagacc ctccggatgt acgatagccc
     2461 actctaggac gcggggaacg ggatggcgac ggctctggta accggaggaa ccgggtttgt
     2521 cggatcccat ctgatcgaag cgctgctcgg gcgcggcgat cgggtccgcg ccctggtacg
     2581 ctcaccggcg aaagccgagg cactcggttt ctccggcgtc gagtggttgc cgggcgacct
     2641 cgacgaccgg ccggcgctcg accgggcgag ccggggcgcc gaggtcatct atcacgcggc
     2701 ggggctggtc gcggtccgga gcgatgccga aggaatggcg gccaaccggg acgggaccga
     2761 gcgcctgatc gattccgctc gcgataccgg agcccgggtg gtgttcgtgt catcgctggc
     2821 cgccggtgga ccctcggaac cgggccggcc cgccagcggg aatgagacgt cgcatccggt
     2881 caccgcctat ggccggagca aactcgccgc agaagcggtc gtacgaagcg gcccccttcc
     2941 ctgggtgatt gtccgcccac ccgccgtgta cggaccgcgc gatcgagagc tcttccgggt
     3001 attccggggg atagcgcggt acggtgtcgc gccggtcttc gggcggggag aacagcagct
     3061 ttccctggta tacgccaccg atctggccca ggcgatcgtg gcggccggca cggtggccgg
     3121 cgcagcggga cagaccttct gcccggccca cccggaagtg gtcacctcgt ccgagctggt
     3181 ccgcgccatc gccgaggcgg cccgccggcg gctgcgaatc atccgaatcc ccgttccgat
     3241 cggccggatc atgctgcacg ccaccggcgc cgtcgctgga ctcaccggcc gaaccaccct
     3301 gctcaatcga gacaagggaa acgagttctt cgcgccgggc tggacctgcg atccgacccc
     3361 attcgaacgg atcagcggtt ggcgggccgc gttcgacctc ccggccggcg ccgccgccac
     3421 gttccaatgg taccgtcagg cgggatggtt gtgatcccgc tcaagctgat cgaccggctc
     3481 atgctgatct acctggggat cgtgacgctg ctggcgttga tccggctgga ccagcgcccg
     3541 tacgggctct gggttatcgg agccaacctg ctcaccgtcg ggctcatctg gctgctgcac
     3601 ctgcccggtc tgggacccct gggccgcacc gtgcgcgaca tctacccggt cctgcttctg
     3661 cccgccctgt acggcgccct cgacctgctc aatggaatcg acgtccgggt gtgggacagc
     3721 gaggtgcagc ggattgaagc cggtttgttc ggcgggcaag tgagtcgcga ctggtggcgg
     3781 agaagtccga gcgggttctg gtcgaccgcg ctgcacgcca cctacttcgc ctactacttc
     3841 atcgtgccgt ttccggcgct gttttttctc tggcgccggg agcgcgaacg ggcccgcaat
     3901 gcggtgacca tgatcgtcgc gaccttcctg tgctgttatc tggtgtttct cctgctgccg
     3961 gtcgcgggac cgtactacga gtttccccga ccagacggcg ccttcgtcga caactgggcc
     4021 gcgcggatgg tgtacgggat tctctccgtg ggaagctcct atggcgcggc cttcccagcc
     4081 tcccatgtgg ccgccatggc ggccgccacc atcagcacct ggatgggatc gcgcggggct
     4141 ggattggccc tgctggtacc gacgctgctc ctcgctgtgg ccgtggtcta ttgccagatg
     4201 cactacgcgg tcgacgcgat cgcaggcctg gtggtgccga ttcccattgc cctggcggtg
     4261 tggcgcgctg ccggacggac agacggactg acggactgac ggaccgacgg aagggcggac
     4321 gggcggacgg gcggacgggc ggacggaaaa cacgaagggc ggagctggta gtcggctccg
     4381 cccttctcat actgtccgtc cgaccgtcag tccgtcagtc cgtccctact gagtgaccgt
     4441 gatggtcgca gtcatcttgt tcgccaggtg gggcaggcag tagtacttgt attcccccac
     4501 cggcgtgttg gcgaatttca ccgtgtaggt tccgttcgga tctacgatca gggggcccgc
     4561 gagggggctc atggggtccg gcatgccggt gctgagcggc tcggccgagc ccgccgggat
     4621 gctgtcggcc cagaactgca cgttgtgcgg accgcccgag acgttgtgga agaccacctg
     4681 gtcgccaatc ttgatggtga gctgatcggg aacatactta tacgcggtcc cttccagcac
     4741 catgttcacg tcatggctcg cgccggctgc gggcgccggg gccggagctt ccggctgagc
     4801 tgcctgctgc tgctgttccc cgccgccacc gcacgcggcc accacgagcg ccagtcccgc
     4861 catcgaaagc ttccgcattg ctgtcctgcc tcccctgtct ggatcgcgta gagtcacggg
     4921 tcgtcctgcg ctgaggcccc gttgccttgt gaacagattc acaaaagtaa tcggtggtta
     4981 agggaatgcc agtgcggcaa tcggaaccct atatctttgc cgcatgtcgt ccgcgccgcc
     5041 gccctgtcgc cagatgggtc gccaatgtcg agccctgaac gtcacgctcc gggtgagtgc
     5101 cgacctcgag gcgccctccg acggcgacga cgaagcaacc tggctcctgg gacacaccca
     5161 gcgcatcacc ttccgtcgat tgtggcggca ccgcgaggat ctctttgccc gcgtcaccct
     5221 gcacgtcccc tgcaaatacc tgtcggagaa tggctcgggg gcgtgctgcg acgcctgggg
     5281 ataccggggc caggtcgctc cctctgaggc acggcaccag gctcggcaat tccccaatga
     5341 tgagtttcgc attgtcgaga acgggcgggt caccacccgc cagctgcgcc agccggcgcc
     5401 caccaagcgc cagttggcag tgctcaacgt gaacccctgc gccaccgccc ggtgccggac
     5461 ctcagacaac accatcggcg ctgcctgttg tcgcgacctg cagatcgaga tcatgtgcga
     5521 cgagcggtgg acccggcagg acctgctggt gcggtcccgc cagtcgccct acctctgcaa
     5581 agtggagcgc gagcgacccg atagccttga agtcgaagtg atctcggcct gtggctatct
     5641 ggggcctgat ggggttgcct gcaccctgca cgggcgccgc cggccggacg gaagcgtggc
     5701 caagccggct ctatgccgcc gctggcccaa accgaccaag gatgagacac tacacccggg
     5761 atgcgtatac caaaaatcag tcgaaggcgg tcgaagagtg tcgaaggagg tcggggcggg
     5821 ttaacatctc gacaccatcc tcgaccgcct tcgacttctt cgaccggctt cgacatgcta
     5881 tcgcatgtgc aatcgctact tgccagtccg tcgtatagat tgacagccag ccctcggggc
     5941 ttccaacatg gccgatgaac tagaacgcct gtatcagacg atgtacgcgt ccgtagtccg
     6001 attcctgtat cgcaaggtct gggatcagga tcgggcggag gacctggcac aggaagtctt
     6061 tatccgggcc atggcccacc gccccgaaaa acctcgggcg tggatttttg cagttgcttc
     6121 caacctggcc cgcgatgaag ccagagcagc cgtcaggcgc aagaagcatc tgacgctgct
     6181 gaccaacgac ccggtgacgc tggcccgacc ggccactggt gccgatgacg tcgtggagca
     6241 ggaggaagag ctggcccagg tgcagttcgc gctcgatgcc ttgagcgcgc gcgacaaaga
     6301 agtgttgttg ttgtgggacg cggggctcag ttaccaggaa atcgcgcaac aaaccggtct
     6361 ggcgctcggc gccgtgggaa ccaccctggc gcgtgcgcgc cgtcgactgg tggaggccta
     6421 cgaccggacg gaggtgaagg aacgtgcggc acattcctga agaggaactg cacgcgtatt
     6481 tggaccaggc gctgagccgg tcccagtgca ttgagattga gacccatctg gcggactgtt
     6541 acgcctgcca gcgtgaccgg gatgctatcg ccgccctccg cgatcgtacc acccgcctgc
     6601 tcggcctcgc cgctccggcg agggctcgcg ccccggcgtg gacggagctg gaggggcagg
     6661 cggtggcgcg ccgccagcag cgcccgtggc gtcgggtcgg cgtgtgggcc gccagcgtgg
     6721 ctggagccgt gctggcgggt tggggtctgc gcacattgag ctacccccac cccacgccgc
     6781 tcgcgcttcg gcctcaggcc ccggcgattt ttgcggtgaa tcccactccg gtcccggttc
     6841 agacgatcgc gctcgagccg gcccgggctc ctgaccctac agcggatctc ggcagctcgg
     6901 atgatggcgt gcggttggtt ggcacaatcc gtcgtcccgc gccggtaacg ccggcatcca
     6961 tcccggccgc gaaccgcgcc ttgagcctga ccggcgactg gacctcggtc acgctggccg
     7021 aagccgaaga tgtcagcggc gggctggtgc cgagggtgtc cgaactgccg gtcgcccagg
     7081 tgcagctccg gcgaaccggc gatgggcgcc ccctgctcct tgtcactcag acggatccgt
     7141 cgggcgaacg gatctatacc atcgaaggcc cagtggacca ggtagccgac ctcatctcgg
     7201 cccagcttcg gaccggctcc gggttcggct ccagcgagcc ctcgcgctcg ctgcccgact
     7261 acgtcaatgt gaacgggtac gtgcagcgca ccagccgggt cctcgcggtg gtgggccgtc
     7321 tgtc
//
LOCUS       DASWKS010000357         3193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2419865, whole genome shotgun sequence.
ACCESSION   DASWKS010000357 DASWKS010000000
VERSION     DASWKS010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2419865"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..460)
                     /locus_tag="VGA78_10245"
     CDS             complement(155..460)
                     /locus_tag="VGA78_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894294.1"
                     /translation="MNSSGAGEFAMWLAVGAGQVAFWWAMSPLIRALADRIARRAPGN
                     ERLEHLETRLAALEQHRPITGEVELQQERLAELEERLDFAERVLTQHGGTAGAPERP"
     gene            complement(453..815)
                     /locus_tag="VGA78_10250"
     CDS             complement(453..815)
                     /locus_tag="VGA78_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894295.1"
                     /translation="MTRDDPSIRGLGLMALAGICGYVFLAWRLGVPFAIPVGVIGAVS
                     AAVILRGPLGKAIARRLEGPAAGPGDEVFGELDDLRNRVSELEERQDFTERLLTQARD
                     GGHLAGHLVDQPDEKAHE"
     gene            complement(812..1144)
                     /locus_tag="VGA78_10255"
     CDS             complement(812..1144)
                     /locus_tag="VGA78_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894296.1"
                     /translation="MIVLVQVEQTPLPPLPPQFPEAFPPELAIIAGLAIILGGIILII
                     VARAVARRLEGKGGAELRAEIDGLHQRVAELEQVEQRMAELENRMEFSERLLTQQRDA
                     LPERGNRT"
     gene            complement(1141..1509)
                     /locus_tag="VGA78_10260"
     CDS             complement(1141..1509)
                     /locus_tag="VGA78_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894297.1"
                     /translation="MKAISALIAILTTFLIGLGIVFGAPDIDDRVRVVLGLGISAALA
                     LLVRGPIGRAIGDQLHGGGSGQLESRLVGQLEEFGAELQGVRDELLQLNERLDFTERL
                     LTRQEEQRSNPPALREGRHR"
     gene            complement(1506..1766)
                     /locus_tag="VGA78_10265"
     CDS             complement(1506..1766)
                     /locus_tag="VGA78_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894298.1"
                     /translation="MEDIIAIILIFGGGTLALLAFSPVGKAVAERIRGRSESADPEMF
                     AELDQLRQDLTELQERVDFTERLLAQHRAVAELGPPDGEVSR"
     gene            complement(1766..2059)
                     /locus_tag="VGA78_10270"
     CDS             complement(1766..2059)
                     /locus_tag="VGA78_10270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894299.1"
                     /translation="MDSDAIKLFWVLTAIGLSGGVIYTVIAIVNVVTRKLEGRTSLGL
                     EPDDVEYLRERAEQVEVLEQRMAELETRVDFAERLLTAPRDPAGASPERDQAG"
     gene            complement(2094..2318)
                     /locus_tag="VGA78_10275"
     CDS             complement(2094..2318)
                     /locus_tag="VGA78_10275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894300.1"
                     /translation="MQYEAMLQTLGWAAGHEVPVRIAVEGGALLVGVPTTLDTHPAAL
                     EVYLHPLGDDTTEIAISLASIRSVELAVST"
     gene            complement(2335..>3193)
                     /locus_tag="VGA78_10280"
     CDS             complement(2335..>3193)
                     /locus_tag="VGA78_10280"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9894301.1"
                     /translation="RTVRPLAANTKLLEAMGRLRRGPVDFTTLRGADGVRLNAWIMKP
                     PGFDSTRRYPVLFHVYGGPGSQTVVDNWTGSQYLWHVMLTQKGYVVASVDNRGTGARG
                     RAWRKIIYRQLGVVETKDQAAAAADLASRPWIDSDRVGIWGWSYGGFMSLNTLFQAPD
                     VYRAAISVAPVTHWKYYDNIYTERYNGLPQENQEGYDRGSPLSYVKNLKGDLLLVHGS
                     GDDNVHYQNSEALVNALVAANKPFQMMEYPDRNHSISGGNTSLHLRELLTRFLDEKLM
                     GSASRAMTP"
BASE COUNT          561 a         1096 c          989 g          547 t
ORIGIN      
        1 cgccggatcg cgaagagaat ggccgaggtg ctgaagacca ggcccagcgc tacctcttcg
       61 tccgccgggc tggtctcgac gaatatgacc ccgacacaga tggtgacgaa gacgtggatc
      121 gcagtgtcga tcagatccag gccaagccat cgcttcatgg tcgctccggc gctccggccg
      181 tcccaccgtg ctgggtcagg acccgctcag cgaaatccag gcgttcctcc aattcggcca
      241 gccgctcctg ctgcagctcc acttcccccg tgatgggacg gtgctgctcc aaggccgcca
      301 ggcgggtttc gagatgctcc agccgttcgt ttcccggagc ccgccgggcg atgcgatccg
      361 ccagcgcgcg gatcaagggg gacatggccc accagaaggc gacctgtccg gccccgaccg
      421 cgagccacat ggcaaactcg cctgcgccgc tgctattcat gggccttttc gtccggctgg
      481 tcgacgaggt ggcctgccag gtggccgccg tcgcgcgcct gggtcaacaa ccgctcggtg
      541 aaatcctggc gctcctccag ctcgctcacg cgattacgaa ggtcatccag ttccccgaat
      601 acctcatccc ccggcccggc cgcggggccc tcgagccgcc gagcgatcgc tttgcccagg
      661 ggtcctcgca gaatcaccgc agcggagacc gcgccgatga cgccgaccgg aatggcgaag
      721 ggaacaccca gccgccaggc gaggaacacg tacccgcaga tgccggccaa ggccatcagg
      781 cccaagccgc gaatactggg atcgtcgcgt gtcaagtccg gttcccccgc tcggggagcg
      841 catcccgctg ctgggtcagg agccgttcgg aaaactccat ccggttctcc agctcagcca
      901 tgcgctgctc cacctgttcc agctccgcca cccgctgatg cagcccgtcg atttcggccc
      961 ggagctcggc accgcccttg ccctccagcc gtcgggccac ggcccgggct acgatgatca
     1021 ggatgatgcc cccgagaatg atggcgagcc cggcgatgat cgccagctcc ggcggaaacg
     1081 cttccggaaa ctgaggcggc agcggcggga gcggtgtctg ctcaacctgc accaggacga
     1141 tcatcggtgg cgcccttccc gcaacgcagg tgggttcgag cgctgctcct cctgtcgggt
     1201 gagcagtcgt tcggtgaaat ccaagcgttc gttgagctgc agcagttcgt cccggacccc
     1261 ctgaagctcg gcgccgaact cctcgagctg accgaccagc ctgctctcaa gctggccgga
     1321 cccgcctcca tgcagctgat cacctatggc tcgtccgatg ggcccccgga ccaacagggc
     1381 cagcgcggcc gagattccca ggccgagcac cacccggacc cggtcgtcga tgtcgggggc
     1441 gccgaacacg atgccgagac cgataaggaa cgtggtcaga atcgcgatca gggccgagat
     1501 ggccttcatc gggacacctc gccgtcaggg ggcccgagct cggccactgc gcgatgctga
     1561 gccaggagcc gttcggtgaa atcgacccgc tcctgcaact cggtaaggtc ctgcctgagc
     1621 tgatccagct ccgcgaacat ctcggggtcc gcgctctcgc tgcgcccccg gatgcgctcg
     1681 gccacggcct tgccgaccgg gctgaaggcc agtaatgcca aggtcccccc gccgaagatc
     1741 agaatgatcg cgattatgtc ttccatcacc ctgcctgatc tcgctcgggg gatgcgccgg
     1801 ccgggtctct gggagcggtc agcaaccgct cggcgaagtc cacccgggtc tccagctcgg
     1861 ccatccgttg ctccagcacc tcgacctgct cggctcgctc tcgaagatac tccacgtcgt
     1921 cgggttcgag ccccagactg gtccgacctt ccagtttccg ggtcacgaca ttcacgatgg
     1981 cgattacggt gtaaatcaca ccacccgaga gacctatcgc cgtgagcacc cagaagagct
     2041 tgatggcatc ggagtccatg ggcgctgcct acgaggcagg agttcctaat gtttcatgtc
     2101 gaaacggcca attccaccga ccggatcgac gccaaggaaa tggcgatctc ggtggtatcg
     2161 tcgcccaggg gatggaggta gacctccagg gcagcgggat gggtatccag cgtggtcggg
     2221 accccgacca gcagggcgcc gccctcgacg gcgatccgaa ccggcacctc atgccccgcc
     2281 gcccatccca acgtctgcag catggcctcg tactgcatgg cgggacccct tccgctacgg
     2341 tgtcatggcc ctggacgccg atcccatcag cttctcatcc aggaaccggg tcagcagctc
     2401 tctgagatgg agggaggtgt ttccgcccga gatgctgtga ttgcggtcgg gatactccat
     2461 catctggaac ggcttgttgg ccgccaccag cgcgttgacc agcgcttcgc tgttctgata
     2521 gtgcacgttg tcgtcgccgc tgccgtgcac caggagcaaa tcgcccttca ggttcttcac
     2581 gtaggacaga ggagaccccc ggtcgtaccc ttcctgattc tcctgcggca gcccgttgta
     2641 ccgttcggtg tagatgttgt cgtaatactt ccaatgcgtg accggggcaa cggagatggc
     2701 cgcacggtag acgtcaggag cctggaacaa ggtattgagg ctcatgaagc ccccgtagct
     2761 ccagccccag atgccgaccc gatcggaatc gatccagggg cgagatgcca ggtcggccgc
     2821 cgcggcggcc tggtccttgg tttccaccac cccgagctga cgatagatga tttttcgcca
     2881 ggcccgaccg cgggccccgg taccccggtt gtccacgctc gcgaccacgt atcccttctg
     2941 ggtcagcatg acatgccaga ggtattggga tccggtccag ttgtcgacca cggtctgact
     3001 tcccgggccg ccatatacat ggaagagaac gggataacga cgggtggaat cgaaaccggg
     3061 cggcttcatg atccaggcat tgagccggac cccgtcggca cctcgcaacg tggtgaagtc
     3121 gaccgggccg cgacgcaagc ggcccatggc ctcgagcagc ttggtgttgg ccgcgagcgg
     3181 acggacggtg cgg
//
LOCUS       DASWKS010000358         6423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2419939, whole genome shotgun sequence.
ACCESSION   DASWKS010000358 DASWKS010000000
VERSION     DASWKS010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2419939"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..942)
                     /gene="tpiA"
                     /locus_tag="VGA78_10285"
     CDS             complement(178..942)
                     /gene="tpiA"
                     /locus_tag="VGA78_10285"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX9894302.1"
                     /translation="MILAANWKMQIAPAEARAFAARFLARIPPRPGTDLVFFPSAVAL
                     DAAADAFAGRDDVRVGAQDIHWEPKGAFTGATSVALAAAAGATCALVGHSERRHVFGE
                     SDQDTGRKVRALLDGGLTPFLCVGELLEQRERGETEAVVQRQLEAACQGLGPDHLLRL
                     VIAYEPVWAIGTGRNATPEDAALVHQSIRRTLEVKGGRPVPILYGGSVNRGNVRALMA
                     RPEIDGVLVGGASLDPDGWAEVVDLANEVASRERRI"
     gene            complement(939..2135)
                     /locus_tag="VGA78_10290"
     CDS             complement(939..2135)
                     /locus_tag="VGA78_10290"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX9894303.1"
                     /translation="MAKRTLASLDGARLDGQRALVRVDFNVPLRDGSVTDATRIRAAL
                     PTIRYLREKGARVVLCSHLGRPKGGPDRKYSLLPVARELEKLLGAPVVFVPSPTGAGA
                     VTTTKRLPRGGIALLENTRFDPGEEANDPELARVYAGLGDLYVNDAFGSAHRAHATTE
                     GVARLLKPAVSGFLMERELKYLGEALTAPERPFGAILGGAKISGKIDLIEALLPKVDR
                     ILIGGAMACTFFKAMGLETGTSLVEEERVEMAGELMRRAGDKVVLPTAVVIAQELSPT
                     AETRTIPRDQIPTGWAVYDIGESTIALFRGIIAGARTVLWNGPMGVFETPPFDRGTRA
                     VAEALAQAHDTGAVTVVGGGDSAAAVSEAGLAERMTHVSTGGGAALEFLEGKELPGVA
                     ALDDLR"
     gene            complement(2135..3145)
                     /gene="gap"
                     /locus_tag="VGA78_10295"
     CDS             complement(2135..3145)
                     /gene="gap"
                     /locus_tag="VGA78_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEX9894304.1"
                     /translation="MTRIAINGFGRIGRNVVRAAHRLGVTDFDLVAVNDLTDPPTLAH
                     LLKYDSVHGRFQGTVEAARDGLVINGDAMRVLAEKDPANLPWKELEVDIVLESTGRFT
                     DRDSAAKHLAAGAKKVVISAPAKQEDITIVYGVNHTKYDPKQHHVISNASCTTNCLVP
                     VVKVVMDAFGFVRGYMTTVHSYTNDQNILDLPHKDLRRARAAALSIIPTTTGAARATS
                     LVIPELKGKIDGVALRVPTADVSLVELCCEIARPASVEQVNAAFRAAAAGPMKGVMGV
                     SDEPLVSVDYIGNLNSSTIDSQSTAVIEGTLVNVSSWYDNEMGYSARCVDLMRYLAGR
                     GF"
     gene            complement(3165..3893)
                     /locus_tag="VGA78_10300"
     CDS             complement(3165..3893)
                     /locus_tag="VGA78_10300"
                     /inference="COORDINATES: protein motif:HMM:NF039185.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEX9894305.1"
                     /translation="MPLWADTLAALRGAERWLLPAECRLCGRSVTAWPDDPLICPLCR
                     SRWAPVPEPVCHRCGQPRDGDLECRICTDWPAGFFGVRSAVWLSGTARDAVHSLKYSG
                     WWRAAQGMAPAMTRLEPLSADSVLVPIPLGSARRRERGYNQSAELAGALGRLVSLPVR
                     EDLLQRTRDTARQTGLAPDARRANLDGAFVGRAWGSRRPVLVDDVFTTGATLVSAAKA
                     LLAAGVHEVSAVTFARAVRPLEDV"
     gene            complement(3877..4686)
                     /locus_tag="VGA78_10305"
     CDS             complement(3877..4686)
                     /locus_tag="VGA78_10305"
                     /inference="COORDINATES: protein motif:HMM:NF020090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894306.1"
                     /translation="MIRSARGRIFVLIGDPVGHSLSPRMQNAAFTALGLDAVYLALRT
                     PADGVAPLMRILGDNGGGGNLTVPHKAAGAGIVSTLRGPLADACNTFWSENGALVGDN
                     TDVIGIKEALAAIGALPSRSMSWLVVGTGGSAKAAAAAARDVGAALAVRSRDPKRAEQ
                     FMAAAGALGSAPADGSSCEVIINCTPLGLGGDDPLPVEPKAVPQARWALDLVYAPGET
                     RWVRAMRAAGAVAADGRELLVRQGGAALERWFPGRRAPLEVMRAAIRAALG"
     gene            complement(4683..5144)
                     /locus_tag="VGA78_10310"
     CDS             complement(4683..5144)
                     /locus_tag="VGA78_10310"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HEX9894307.1"
                     /translation="MRVLFVCSGNTCRSPLAQVLFRRMLDESGRTDIEVASAGTGAYE
                     GAPASEGAYLVALEADLDLSAHRARLLDREQVAEADLILTMSRGHLARVERLGGEGKA
                     HLLGEYAGIDGEDVEVRDPYGGDVEGYRLALGQLSRLLGPARDRLLAERPS"
     gene            complement(5153..5797)
                     /locus_tag="VGA78_10315"
     CDS             complement(5153..5797)
                     /locus_tag="VGA78_10315"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEX9894308.1"
                     /translation="MSFRVAADVDRVLPQVKAHLAADRILAYPTETVYGLGSAPTAPA
                     LDALARLKGRAKDKPFLLLVSDRAMAERWGLVFPPSARALAEAFWPGPMTLVLPGGEG
                     HLPDRLRGPEGGIAVRHTSHVMMARLVAGLGEPLTSTSANRPGQQPAPGPERIASTFA
                     EEESRGELLILDGGTLGNVPPSTVVDCTGPVPLLIREGALPRAELRRAVGRLAP"
     gene            complement(5797..>6423)
                     /locus_tag="VGA78_10320"
     CDS             complement(5797..>6423)
                     /locus_tag="VGA78_10320"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEX9894309.1"
                     /translation="VPLLLRALDPFLTHPEVAMVVAVVPPEEAERPPDWLAEIAGVRL
                     RVVSGGGERYESVRAGLAVLSSACEIVLVHDGARPFPSHDVIEQVVAVARSGRAAIAA
                     LPLGDTLKEAERTDDGVVVRRTIPRDELWRAQTPQGFPRALIERAYLENADLVSTDDA
                     QLVERLGVPVVLVPDLSSNLKVTTPEDLQIAEALLVSARQPVRSPATP"
BASE COUNT         1026 a         2335 c         2134 g          928 t
ORIGIN      
        1 acgcaccgtc ccggtgacgg cgcgttgggc tgacaaggac ccggcgagta tcgcgagaag
       61 aaccaccacg gtcccacaca cggagcgcat acgacctccc ggctcatgtg ggtgaagcgg
      121 agctgttttc gagggagaca acgttaccgc aaagattctg gaaacgcgag agcggggcta
      181 tatcctcctc tcccgactcg cgacctcatt cgcgaggtcc accacctccg cccagccgtc
      241 cggatccaga ctcgcgcccc caaccagaac gccgtcgatt tcgggtcgag ccatcagggc
      301 tcgcacgttg ccccggttga cgctgccgcc atagagaatg ggaaccggcc ggccgccctt
      361 cacttccaaa gtccgccgga tgctctgatg caccagggcg gcgtcctccg gcgtcgcgtt
      421 gcgtcccgtc ccgatggccc acaccggttc gtacgcgatc accagccgga gcaggtgatc
      481 cggtcccagt ccctgacagg cggcctccag ctgtcgctgc acgacggcct cggtctctcc
      541 ccgctcgcgc tgctccagca gctcgcccac gcaaagaaag ggcgtcaatc ccccatcgag
      601 cagggctcgg accttgcggc cggtgtcctg gtccgattcc ccaaagacgt gccggcgttc
      661 cgaatgaccc accagggcgc aggtcgcacc ggcggctgcg gccagggcga ccgaggtggc
      721 cccggtgaac gcgcccttgg gttcccagtg aatgtcctgt gcgcccaccc gcacgtcgtc
      781 gcggccggca aaggcgtcgg ccgcggcatc gagggccacc gcgctcggga aaaagaccag
      841 atcggtgccc gggcggggcg gaatccgggc caggaagcga gccgcgaagg cccgggcctc
      901 cgccggggcg atctgcattt tccaattggc ggcgaggatc atcggaggtc gtcgagcgcg
      961 gccacccccg ggagttcctt gccttcgaga aactccaggg cggcaccccc gccggtcgag
     1021 acgtgagtca tccgctccgc cagcccggcc tcggacaccg cggcggcgga gtcccctccc
     1081 cccaccacgg tcacggcgcc ggtgtcgtgg gcctgggcca gcgcctcggc gacggcgcgg
     1141 gtaccacgat cgaagggagg ggtctcgaac acgcccatcg gaccgttcca taggacggtc
     1201 cgcgcgccgg caatgatccc gcggaagagc gcgatggtgc tctcgccgat gtcgtatacc
     1261 gcccacccgg tcgggatctg gtcgcgcgga atggttcggg tttccgcggt gggggacagt
     1321 tcctgcgcga tcaccaccgc ggtggggagc accaccttgt ctccggcccg gcgcatcagc
     1381 tcacccgcca tctccacccg ctcctcctcg accagcgagg tgccggtctc gagccccatc
     1441 gccttgaaga aggtgcaggc catggcgccg ccgatcagga tccgatcgac cttgggcagc
     1501 agcgcctcga tgagatcgat cttgcccgag atcttggcgc cgcccagaat cgccccgaag
     1561 ggtcgctccg gggcggtcag tgcctccccc agatacttga gctcccgttc catcaggaat
     1621 ccgctcaccg ccggcttgag cagccgggct acgccttcgg tggtggcgtg ggcgcgatgg
     1681 gccgagccaa aggcgtcgtt cacgtacagg tcgcccagcc cggcgtagac ccgggccagc
     1741 tcgggatcgt tggcttcctc gcccggatcg aaccgggtgt tctcgagcag cgcgatccca
     1801 ccccgcggca gccgcttggt ggtggtaacg gcgccggcgc cggtcgggct gggcacgaag
     1861 accaccgggg cgcctaacag cttctccagc tcccgcgcca ccggcagcag cgagtacttc
     1921 cggtcgggcc cgcccttggg ccggcccagg tgggagcaga gcaccacccg ggcgcccttc
     1981 tcccgcaggt atctgatggt gggaagggcc gcgcggatcc gagtcgcgtc ggtcaccgat
     2041 ccgtcccgca gcggcacgtt gaagtccacc cggaccagcg cccgctggcc gtcgagccgg
     2101 gccccgtcca gcgacgccag cgtgcgcttg gccatcagaa gccccggccg gccaggtacc
     2161 gcatcaggtc gacgcagcgg gccgagtatc ccatctcgtt gtcgtaccag gacgacacgt
     2221 tgaccagggt tccttcgatg acggcggtgc tctggctgtc gatggtgctg gagttgaggt
     2281 tcccgatgta gtccaccgac accagcggct cgtcgctcac ccccattacg cccttcatcg
     2341 gtccagcggc tgccgcccgg aacgccgcgt tcacctgctc cacgctcgcc ggccgggcga
     2401 tttcgcagca cagctccacc agcgacacgt ccgccgtggg cacccggagc gccacgccgt
     2461 cgatcttccc tttgagctcc gggatcacca gcgacgtggc ccgggccgcg ccggtcgtgg
     2521 tcgggatgat ggacaacgcg gccgcccggg cgcggcgcag atccttgtgg ggcagatcga
     2581 ggatgttctg gtcgttggtg taagagtgca ccgtggtcat gtagccgcgc acgaacccga
     2641 aggcgtccat caccaccttc accaccggga ccaggcagtt ggtggtacag ctggcgttgg
     2701 agatgacatg atgctgtttg ggatcgtatt tggtgtgatt caccccgtac acgatcgtga
     2761 tgtcttcctg cttggcgggc gcggagatca ccaccttctt ggcgcccgcg gccaggtgct
     2821 tcgcggccga atcgcgatcg gtgaagcggc cggtcgattc gagcacgata tcgacctcca
     2881 gctctttcca cggcaggttg gccggatcct tctcggccag gacccgcatg gcgtcgccgt
     2941 tgatcaccag cccgtcccgg gcggcttcca ccgtgccctg gaagcggccg tgcaccgagt
     3001 cgtacttcag cagatgggcc agcgtgggcg ggtcggtgag atcgttcacc gccaccaggt
     3061 cgaagtcggt gacgccgagc cggtgcgcgg cccgaaccac gttacggccg atgcggccga
     3121 atccattgat cgcgatgcgg gtcatctcgg gatctctctc tgagtcacac gtcctctaac
     3181 gggcgtaccg ccctggcgaa ggtcactgca ctcacttcat gcactccggc tgccaacagg
     3241 gccttggccg ccgacaccag agtagccccg gtggtgaaca cgtcatccac cagcaccggc
     3301 cggcgcgatc cccaggcccg gcccacgaag gcgccgtcca ggttggctcg gcgggcgtcg
     3361 ggtgccaggc ccgtctggcg cgccgtgtca cgggtgcgct gcaacagatc ctcgcgcacc
     3421 gggagggaca cgaggcgacc cagggccccc gccaattcgg cggactgatt atagccccgc
     3481 tcccgccgtc gcgcggaccc gagcggaatc gggaccagaa ccgaatcggc gctgagcggc
     3541 tcgagccgcg tcatcgccgg agccatcccc tgggcggccc gccaccagcc gctgtatttg
     3601 agtgaatgca ccgcgtcgcg cgcggtgccc gagagccaga ccgcgcttcg taccccgaag
     3661 aaaccggctg gccagtcggt acagatccgg cactcgaggt ccccgtcgcg cggctgcccg
     3721 caccggtgac acaccggctc gggcaccggc gcccaccgcg agcggcacag cggacagatc
     3781 aggggatcgt cgggccaggc ggtgacggaa cggccgcaca aacggcattc cgccggcagc
     3841 agccatcgct cggcgccgcg gagagcggcg agggtgtcag cccagagcgg cacggatcgc
     3901 cgcccgcatg acttcgagcg gcgcccgccg gccgggaaac cagcgctcta gcgccgcccc
     3961 tccctgccgg accagcagtt cccgcccatc ggccgcgaca gcgcccgcgg cgcgcatggc
     4021 gcgaacccag cgcgtctcgc ccggggcata gaccagatcc agcgcccagc gcgcctgggg
     4081 gacggccttc ggctccaccg gcaacggatc atcccccccg aggcccagag gggtgcagtt
     4141 gatgatcact tcacagctgg acccgtcggc cggagcgctg cccagcgcac ccgcggccgc
     4201 catgaattgc tcggcccgct tcggatcgcg cgagcggacg gccagcgcgg cgcccacgtc
     4261 ccgtgccgcc gcggccgcgg ctttggccga gcccccggtc ccaaccacca gccagctcat
     4321 cgaccgggac gggagggcgc cgatggcggc cagggcttcc ttgatcccga tcacgtcggt
     4381 gttgtcgccg acgagggcgc cgttctcact ccagaaagtg ttgcaggcgt cggccagcgg
     4441 acccctgagc gtggatacga tgccggcccc agccgccttg tgcggcacag tgaggttgcc
     4501 accgccgccg ttgtcgccca ggatgcgcat caggggcgcg accccgtcgg ccggcgttcg
     4561 cagcgccagg tataccgcat ccagccccag ggcggtgaag gcggcgttct gcatccgggg
     4621 agaaagcgaa tgaccgacgg gatctccgat cagcacgaag atccggcctc gagccgagcg
     4681 gatcatgagg gtcgttcagc cagcagtcga tcgcgggcgg gcccgagcag acgtgacagt
     4741 tgtcccaagg ccaggcgata gccttcgacg tcgcctccgt agggatcacg cacttcgaca
     4801 tcttccccgt cgatcccggc gtactcgccc agaagatggg ctttgccttc gccacccagc
     4861 cgctcaaccc gcgccaggtg tccccgcgac atggtgagga tcaggtcggc ctccgccacc
     4921 tgctctcggt ccagcagccg ggcgcgatga gccgacagat cgagatcggc ttcgagcgcc
     4981 accaggtagg ccccttcgga cgcgggggcg ccctcgtacg ccccggtgcc cgccgaggct
     5041 acctcgatgt cggtccggcc cgactcgtcc agcattcggc gaaagagcac ctgagccagc
     5101 ggactgcggc aggtatttcc ggagcagacg aaaagcacgc gcatcggcat cctcagggcg
     5161 ccagccgccc caccgcccgg cgcagctcgg cccggggcaa ggcgccctca cgaatgagca
     5221 gcggcaccgg accggtgcag tcgaccaccg tggacggcgg cacattcccc agcgtgccgc
     5281 cgtccaggat caggagctcg ccccgcgact cttcctcggc gaaggtcgac gcgatccgct
     5341 caggaccggg cgccggttgc tggcccggcc ggttggcgga cgtcgaggtc agcggctcac
     5401 ccaggccggc gaccagccgg gccatcatca catgactggt atgtcgcacc gcgatgccgc
     5461 cctcaggtcc ccgcagccga tcggggaggt gcccttcacc acccggcaga accagcgtca
     5521 tcggtccggg ccagaacgct tccgccaacg cccgcgccga aggaggaaat accagacccc
     5581 agcgttccgc catcgcacgg tcgctgacca gcagcaggaa cggcttgtcc ttggcccgcc
     5641 ccttgagccg cgccagcgcg tcgagcgcgg gggccgtggg ggccgatccc agtccgtaca
     5701 ccgtctcggt gggataggcg agaatacggt cggcggccag atgggccttg acctggggaa
     5761 gcacgcggtc cacgtccgcc gcgacgcgga acgacatcat ggggtggcgg gcgaacgtac
     5821 cggttggcgc gccgagacca gcagggcctc ggcaatctgg agatcttccg gcgtggtcac
     5881 cttgagatta ctcgagagat ccgggaccag taccaccggg acccccagcc gttccaccag
     5941 ctgggcatca tcggttgaca cgaggtcggc gttctccagg taggctcgtt cgatcagcgc
     6001 gcgaggaaat ccctgcgggg tctgggcccg ccacaactcg tcgcgcggaa tggtccgccg
     6061 caccaccacg ccgtcatcgg tgcgctcggc ttctttgagg gtatcaccca ggggcagggc
     6121 cgcgatggcg gcccggccgc tccgcgcgac ggcgacgacc tgctcgatga cgtcgtggga
     6181 gggaaacggc cgggcgccgt cgtgcaccag cacgatctcg caggccgacg acaggaccgc
     6241 cagcccggcc cgaaccgact cgtagcgttc gccgccccca gagaccaccc gcagccggac
     6301 tccggcgatc tcagccagcc agtcgggcgg ccgctcggcc tcttcgggcg gcaccaccgc
     6361 caccaccatc gcgacttcgg gatgggtgag gaagggatcg agggcccgca gcaacaaggg
     6421 cac
//
LOCUS       DASWKS010000359         2592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_177022, whole genome shotgun sequence.
ACCESSION   DASWKS010000359 DASWKS010000000
VERSION     DASWKS010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177022"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..826)
                     /locus_tag="VGA78_10325"
     CDS             complement(<1..826)
                     /locus_tag="VGA78_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HEX9894310.1"
                     /translation="MFGPDCACLVVVGAQWGDEGKGKLVDVLAESADLVVRYQGGANA
                     GHTVVIGDEQFILQQIPSGILHPGTSCVVGNGVVLDPQTFFEELDRLHAKGIATDGRI
                     LVSDRAHLVLPYHKLLDQAGEKSQKIGTTGRGIGPTYEDKYGRRGLRVGDLRNQDQTR
                     KLLVERLERANALLEMLGATERASLDQHTALLQRIAPRLLPLTTDTGLVVDRALKAGQ
                     RVLMEGAQGALLDVDHGTYPFVTSSNTTAGGAAVGAGIGPTAIDAVLGVVKAYTTRV"
     gene            complement(841..1917)
                     /locus_tag="VGA78_10330"
     CDS             complement(841..1917)
                     /locus_tag="VGA78_10330"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEX9894311.1"
                     /translation="MAGASMEKIIKAAVERGASDLHVKAGDVFRARINGKLMPLTKQR
                     LTPEQTRAIALRLVGSEDVRNRIDTIRDFDCSWGLPGVGRFRINILRQRSSFMIVMRV
                     IPFTLPTFESLELPPVVQSLAEAERGLVLVTGVSGSGKSSTVAAMVHHINQNHQRHIV
                     IIEDPIEFLHRDLNCSITQREVGVDTNSAEVGIRAALRQDPDVIVLGDLRDATAVNHA
                     IKAAETGRLVIAVMPTPNVIATVGQVLTLLPQDEREIGRVRFSQALRGIVAQQLVPRA
                     DGTGRVALVEVLVANSPAREAIRDPTRLNDLQQIMAGGDGDMTTFTRYAGGLVEREVI
                     TKETAKVVQGDRPSPPHGRRRRGD"
     gene            complement(1917..>2592)
                     /locus_tag="VGA78_10335"
     CDS             complement(1917..>2592)
                     /locus_tag="VGA78_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX9894312.1"
                     /translation="FKDKSQRLDSVPAGLLQYPVLQAADILLYRADTVPVGEDQAQHL
                     ELTREVARRWNQQFAPDQPFFPEPVALHTEAKRILGLDGQAKMSKSLGNTIAITESAE
                     EIWQKLRPAVTDPARVKRTDPGEPLKCPVIYQLHRHFSPPDVVELVEHNCRGAGWGCL
                     DCKRVLADHMVAVLAPMRERVLALREQPEQVDRILADGAERARAIARETLRVAKDRMG
                     FLGGRT"
BASE COUNT          401 a          923 c          830 g          438 t
ORIGIN      
        1 ccacccgggt agtgtatgcc ttgaccacgc cgagcaccgc gtcgatggcg gtggggccga
       61 tccccgcccc tactgcagcc cctcccgccg tcgtattgga ggaggtgacg aaaggatagg
      121 tcccgtggtc cacatcgagc agcgcgccct gcgctccctc catcagcacc cgctgtcccg
      181 ctttgagcgc ccggtcgacc acgaggccgg tatcagtggt caggggaagc aggcgcggcg
      241 cgatccgctg gaggagagcg gtgtgctggt ccagggaagc gcgctcggtg gcgcccagca
      301 tctccagcag cgcattggcc cgttccagcc gttccaccag gagcttccgg gtctgatcct
      361 gattcctgag atcgccgacg cgaaggcccc gccggccgta cttgtcctca taggtgggcc
      421 cgatgccccg gccggtggtc ccgatctttt gactcttctc acccgcctgg tcgagcagct
      481 tgtggtacgg cagcaccaga tgggcccggt ccgacaccag gatccgtccg tcggtggcga
      541 tgcccttggc gtggagccgg tccagctcct cgaaaaaggt ttgggggtcg agcactacgc
      601 cgttcccgac gacacagctg gtgccggggt gcagtatgcc ggagggaatc tgctgcagga
      661 tgaactgctc gtcgccgatg acgacggtgt gcccggcgtt ggcgccgcct tgatagcgca
      721 ccaccaggtc ggcggactcg gccagcacgt cgaccagctt tcccttgccc tcgtcacccc
      781 actgggcgcc gaccacaacc aggcaggcgc aatccgggcc gaacatgctc cgccctttcg
      841 tcagtcgccg cggcgacgcc tgccgtgagg gggcgagggg cggtctccct ggaccacctt
      901 ggcggtctcc ttggtgatga cttcgcgttc gaccagaccc ccggcgtagc gggtaaaggt
      961 ggtcatgtcg ccgtcgccac cggccatgat ctgctgcagg tcgttgagcc gcgtcgggtc
     1021 ccggatggcc tcgcgggccg gcgagttggc gaccagcacc tccaccagcg ccacccggcc
     1081 ggtgccgtcg gcccggggca ccagctgctg cgccacgatg ccgcgcagcg cctgggaaaa
     1141 ccgcacccgt ccgatctcgc gctcgtcctg cggcagcaag gtcagcacct ggcccaccgt
     1201 ggcgatgacg ttcggagtcg gcatcacggc gatgaccaga cgcccggttt cggccgcctt
     1261 gatggcatgg ttcaccgcgg tcgcatcccg cagatcaccc agcacgatca cgtcgggatc
     1321 ctgccgcaga gccgcccgga tcccgacctc cgccgagttg gtatcgacgc ccacttcacg
     1381 ctgggtgatg gaacagttga gatcccggtg caggaactcg atcgggtcct cgatgatcac
     1441 gatgtggcgc tgatgattct ggttgatgtg gtggaccatc gcggccacgg tggagctctt
     1501 cccgctgccg ctgaccccgg tcaccagcac cagcccccgc tcggcctcgg ccaggctctg
     1561 gaccaccggc ggcagctcca gcgattcgaa cgtcggcagg gtgaacggga tcacccgcat
     1621 cacgatcatg aaggaggagc gctgccgcag gatgttgatc cggaagcggc ccacgccggg
     1681 cagcccccag ctgcagtcga aatcgcggat ggtgtcgatc cggtttcgta cgtcctccga
     1741 acccaccagc cgtagcgcga tggcccgggt ctgctccggc gtcaggcgct gcttggtgag
     1801 cggcatcagc ttgccgttga tccgggcccg gaacacatcg cctgccttga cgtgcagatc
     1861 ggaggcgccg cgttccaccg ccgccttgat gatcttctcc atcgacgcac cggccatcag
     1921 gtcctcccgc cgaggaaccc catccgatcc ttcgccaccc gcaacgtctc ccgcgcgatg
     1981 gcgcgggccc gctcggcgcc atcggccagg atacggtcga cctgctccgg ctgttcccgc
     2041 agcgccagca ctcgctcccg catcggggcc agcacagcca ccatgtggtc ggccagcacc
     2101 cgcttgcaat cgagacaacc ccagcccgcg ccccggcagt tgtgctccac cagctccacc
     2161 acgtcgggag ggctgaagtg ccggtgcaac tggtagatca ccggacactt gagcggctca
     2221 cccggatcgg tgcgcttgac ccgggccggg tcggtcaccg ccggtcgaag cttctgccag
     2281 atctcctcgg ccgattcggt gatggcgatc gtgttgccca ggctcttcga catcttggcc
     2341 tgcccatcga gaccgaggat ccgcttggcc tcggtatgca acgccaccgg ttcagggaaa
     2401 aagggctgat cgggcgcgaa ctgctgattc caccggcggg cgacttcccg ggtgagctcc
     2461 agatgctgcg cctgatcctc gcccaccggg accgtgtccg cccgatacaa cagaatgtcg
     2521 gccgcctgca gcaccgggta ctgcaacagc ccggccggga cgctgtcgag gcgctgcgac
     2581 ttatctttga ac
//
LOCUS       DASWKS010000360         9219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1675473, whole genome shotgun sequence.
ACCESSION   DASWKS010000360 DASWKS010000000
VERSION     DASWKS010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675473"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..922
                     /locus_tag="VGA78_10340"
     CDS             185..922
                     /locus_tag="VGA78_10340"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9894313.1"
                     /translation="MSQQSVSRSGRPPVLERNAARSREAILDAAERLFAQAGYEATSL
                     TDVGQHAGVSRGTPGYFFGSKADLWHAVLERCFREARDAVVAGRDRALASREPPDVVL
                     GGVVRDYFDFLSAWPNFVRLMERQALGEGPEAYPDVARAAGQASLAAIVAELGLDDGR
                     SREAAHLLLSMVALCWFPLVHGKTYLPAIGLAPESAGFAEERKAHVVDLILHGIAGRL
                     GSNRARAGEREPAHLERRKASEQDSTS"
     gene            919..2799
                     /locus_tag="VGA78_10345"
     CDS             919..2799
                     /locus_tag="VGA78_10345"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9894314.1"
                     /translation="MTTMIPEPRPTLEPLAPSPVPSEQEAREVAEAAREQEWNASFVK
                     ELFEGRLRLDLIHPFPEPRLEDVAKAAPFLARLDRFLADKVDGDLIDRESKIPAELVE
                     ELKAMGAFGIKIPEEYGGLGLSQLMYTRAIAKVTSVDGSLTALLSASQSIGVPVPLKL
                     FGTEAQKQKYLPRIARGAISAFALTESHVGSDPAGLSTTATLSDDGTHWILNGEKLWC
                     TNGTVAEVRVVMARTGPTRITAFIVEADWPGVEVVKRLHFMGLHGIENGVLRFTNVKV
                     PVENLLWAEGKGLKLALITLNTGRLTIPAGCAAGAKRAVEIARKWAGERVQWGQPIGK
                     HDAIAQKIGRMAAETFAMEAIADLASLLSDRPGTDIRLEAAIAKMWNTEVGWRMMDDL
                     LQIKGGRGYETADSLRARGERPDPVERMLRDWRINLIFEGSSEIMRLFIAREAVDTHL
                     SVAGDLINPKAPPGRRAAALLKSAGFYALWYPRLWLGWGRWPRYAEFGLLAGHLRFVN
                     RASRRLARALFHAMIRFGPKLERRQSVLFRLVEIGAELLAISAACSRAVALVKQDPSS
                     RGPIEMADVFSRQAARRVRSLFRQVFRNDDTATYRLAQEVVKGQHLWLEEGIVGWEGG
                     KE"
     gene            complement(2879..5056)
                     /locus_tag="VGA78_10350"
     CDS             complement(2879..5056)
                     /locus_tag="VGA78_10350"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HEX9894315.1"
                     /translation="MIAAFAFLLSGPGTIPADTVPLSPGLVITRSVIIRAGEYRLSPL
                     AGDSVVLRVRGSGIVVDFGGAVLSGGDPGGRPDEYHGIGVLIEDGRGITLRNARIRGF
                     KVGVLARNVRNLLLARNDVSYNWKPRLWSGPGHESLVDWLTYHRNEQDAWLRYGAGIY
                     LTGVDGGEIRDNVARQGMNGLLLVRSSRLRIWNNDFSFQSGLGIGLYRASYNTIMHNR
                     ADWCMRGYVHGGYSRGQDSAALLLYEQSSHNVVAYNSMTHSGDGLFLWAGQSTMETGK
                     GGANDNLFFGNDFSFAAANSIEVTFSRNRMIGNRLEGSTYGVWGGYSFESEIRDNYFA
                     RNVVGLAIEHGQDNLIAGNIFDGDRTAIRLWWNRIEPSEWGYPRHRDTRSRDYRIEGN
                     RFLGNGLALRLEHTRNVRLVKNVFGFTDTLLSAAGDTSGFRADRLERIDGGLLGRTLW
                     RPDPAHRDAPPQLPGAHDPMLPAGARQGRHTILIDQWGPYDWRSPKLWPARLADSAYL
                     RGPLALAVLGPTGTWRLLSAHGVRLLSDSAGDVGDTVVVTPVEAPVTDWWIELEYRGG
                     EVIAPNGARTAAGAPYRFTYRRFVAPVHWAVRVAAWDSTSDPRTRVEAFRAALAGPPL
                     AARREPALDYMWSRPRLPGFPPQRFGVLAEGEVELPAGEYDLVTISDDGIRVWIDDQL
                     AIDRWEAHESALAIAPLRGGRRRLRVEYYQVEGWMELRVEVRK"
     gene            5096..5491
                     /gene="queF"
                     /locus_tag="VGA78_10355"
     CDS             5096..5491
                     /gene="queF"
                     /locus_tag="VGA78_10355"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR03139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEX9894316.1"
                     /translation="MATAEGRVLPFVGPEHIEVAVLETFPYQGPEQEVVTETSEFSAV
                     CPYSGLPDYARLTVSYVPDAKCVELKSLKYYITSYRNVGIFQEHATARMAEDLFRLLE
                     PRRLTVRTGYNPRGGFETTCTVTLDGPTG"
     gene            complement(5526..6338)
                     /locus_tag="VGA78_10360"
     CDS             complement(5526..6338)
                     /locus_tag="VGA78_10360"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEX9894317.1"
                     /translation="MARPIPVANRARGVLVGLARAHAGGTDPAGELVGEAALAALLAE
                     ELLETEVDLRRLTERWITWWRRDGRGIGPRTGEALEHLARYDAPLPPGGGMADPGPLV
                     RVVPIALAAASQPRNLVGGTWHTVMLTHPDATTAWTAVAANVALSQLLLGRRDFLPDV
                     IEALQANDAAVEVLSAVRRIPFVQQDELDGGGHAAIASAEVALWTAHHESRVDRAWAG
                     PAAGPGDGAALVAALLGAREGEQAVPGPAPESERLRSLAKRLVTRRTDGQTD"
     gene            6426..7709
                     /locus_tag="VGA78_10365"
     CDS             6426..7709
                     /locus_tag="VGA78_10365"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEX9894318.1"
                     /translation="MNRDTLTITDNRTDKSYELPITDGTIKAMDLRQIRTSEDDFGLM
                     AYDPAFMNTAACRSAITYIDGDRGILRYRGYPIEQLAERASFLEVAYLLAEGELPTGE
                     QLDRWTTDIRYHTYVHTNIIKFLEGFRYDAHPMGMLLGTVGALSTFYPDAKNISDPSN
                     RHVQRVRLMAKLPTLAAFVFRHSRGLPYEFPRNDLEYIGNYVNMMFSIGGRHEPNRVL
                     QRALEILLILHADHEQNCSTSAVRAVGSSHVDPFSAVSAGIGALYGPLHGGANEAVLL
                     MLDEIGNKKNIPGFIEKVKKGEGRLMGFGHRVYKSYDPRAKLIKHTADEVFQQTGLNP
                     KLEIALELERIALEDDYFIKRKLYPNVDFYSGLIYQAMGYPTDYFTVLFAVGRLPGWL
                     AQWEEMLMDKEQKIARPRQIYTGHPERPFVPLEQR"
     gene            complement(7720..>9219)
                     /gene="speA"
                     /locus_tag="VGA78_10370"
     CDS             complement(7720..>9219)
                     /gene="speA"
                     /locus_tag="VGA78_10370"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEX9894319.1"
                     /translation="EEFMRLALMGHRLGHQVFIVLEQLAELDDVLRVADDMGIQPVLG
                     VRIKLATEGSGRWAKSGGEKSKFGLSAPQLIRLLGRLEELGRKDLLRLVHFHLGSQIP
                     DIRYVKKGLEEIGRFYAEIRELGFNLTHVDVGGGLGVDYDGSRSTRPASVNYTLGEYA
                     NDVVYLLGNTCRQLNIPMPNIISESGRALTAHHALLLVNVTDVEAQTEPQVPAVDRKK
                     SHKVLKELKENFDALTLASVEEAFHDALFAKERAQELFASDAITLKQLADIEEYYLAT
                     MNAIAKLIAPDKPAYADIQNHLESTLVDRYFCNFSVFQSLPDNWAIDQLFPIMPIHRL
                     LEVPDRRGTLQDITCDSDGVIDRFSGGRRGKPSLELHPWKDGEPYILGIFLTGAYQEI
                     LGDLHNLFGDTNAVHIKLTNGTYEVTDLVEGDTVTEVLNYVQFRANDLMATFRRKVGN
                     AKDLSRTDANAFIADYLAGLEGYTYLEGDVPREWKLETERVAQAVASEP"
BASE COUNT         1579 a         3137 c         3004 g         1499 t
ORIGIN      
        1 ggtccaccag ccgggccacg ttcacgaaca tctggtcgca gtcggccagc aggacccgac
       61 ggtcgggcgt cgggacagac gggcggtctg tcattcgctg ggctggctca tcggcactcc
      121 cgaatatacg ccgaaaacac attgccctct ttacaacttg ctaatcgaca agcaagttat
      181 aggtatgagt caacagtccg tcagtcggtc cggccgtccg cccgtcctgg aacgaaacgc
      241 cgcacgcagt cgagaggcga ttctcgatgc cgccgaacgc ctcttcgccc aggcgggcta
      301 cgaggcgacc agcctgaccg acgtgggaca gcacgccggg gtctcccgcg gcacgccggg
      361 ttacttcttc gggtccaagg ccgacctctg gcacgcggtc ctggaacgct gcttccgcga
      421 ggcgcgcgac gcggtggtcg caggacggga ccgggctctg gcgagccgcg aaccgcccga
      481 tgtcgtcctg ggtggggtgg tgcgggacta cttcgacttc ctgagcgcct ggcccaactt
      541 cgtgcggctg atggagcgcc aggcactggg cgagggaccc gaggcatatc ccgacgtggc
      601 gcgtgccgct ggccaggcct cgctcgcggc catcgtcgcc gagctggggc tggacgacgg
      661 ccgctcgcgc gaggcggccc atttgctgct cagcatggtg gccttgtgct ggttccctct
      721 ggtacacggc aagacctatc tcccggccat tggactcgcc cccgagagcg ccggcttcgc
      781 ggaagagcgc aaggcccatg tcgtcgatct gatcctccac ggcatcgcgg gacggctggg
      841 ctcgaaccga gcccgggctg gcgaacggga accagcacac cttgagcgca ggaaagcctc
      901 agaacaggat tcgacctcat gaccacgatg atcccggagc ctcgtcccac gctcgagccc
      961 cttgctccga gcccggttcc cagcgagcag gaggcgcgtg aagtcgccga agcggcccgc
     1021 gagcaggaat ggaatgccag cttcgtcaag gagctgttcg agggccggct ccggctcgat
     1081 ctgatccacc ccttccctga gccccgcctg gaagatgtgg ccaaggcggc gccgtttctg
     1141 gcccggctcg accggtttct ggccgacaag gtggatggtg acctgatcga ccgcgagtcc
     1201 aagatcccgg cggagctggt ggaagagctc aaggcgatgg gcgccttcgg catcaagatt
     1261 ccggaagaat acggcggtct gggactgtcg cagctgatgt acacccgggc gatcgccaag
     1321 gtcaccagcg tcgacggctc gctcactgcg ctcctgtccg ccagccagtc gatcggcgtc
     1381 ccggtgccgc tcaagctgtt cgggaccgag gcgcagaaac agaaatacct tccccgcata
     1441 gcccgaggcg ccatctccgc ctttgcgctc accgaatccc acgtggggag cgatccggcc
     1501 ggcctgtcga ccaccgcgac gctgagcgac gatggcaccc actggattct caacggcgag
     1561 aagctgtggt gcaccaacgg caccgtagcc gaggtgaggg tggtgatggc ccggaccggt
     1621 cccacgcgga tcaccgcctt catcgtcgaa gccgactggc ccggtgtgga agtggtgaag
     1681 cgactccact tcatgggatt gcacgggatc gagaacggcg tcctgcgttt caccaatgtg
     1741 aaggtgccgg tcgagaacct gctctgggcc gaggggaagg gtctcaagct cgccctcatc
     1801 accctcaaca ccggccgcct gaccattccg gccgggtgcg cggcgggtgc caagcgcgcc
     1861 gtcgagatcg cgcggaagtg ggccggtgag cgggtgcagt ggggccagcc catcgggaag
     1921 cacgacgcga tcgcccagaa gatcggacgg atggccgccg agaccttcgc gatggaagcg
     1981 atcgccgacc tggcttcgtt gctgtccgat cggcccggca ccgacatccg gctggaagcc
     2041 gcgatcgcca agatgtggaa caccgaagtc ggttggcgga tgatggacga cctgctccag
     2101 atcaagggcg gccggggcta cgagacagcc gattccctcc gggcccgcgg cgagcggccc
     2161 gaccccgtgg agcggatgct gcgcgactgg cgtatcaacc tgatcttcga aggctcgagt
     2221 gagatcatgc gactgttcat cgcccgcgag gcggtggaca cccatctctc ggtggcgggt
     2281 gacctgatca accccaaggc cccgccgggc cgcagagcgg cggcgctcct caagtcggcc
     2341 ggcttctacg cgctctggta cccacgcctg tggctggggt ggggccgctg gcctcgctac
     2401 gccgaattcg gcctgttggc cggccacctg cgattcgtaa accgggcctc gcgccggctg
     2461 gcacgcgcgc tgttccacgc gatgatccgc ttcggaccca agctggagcg gcggcagtcg
     2521 gtgctgttcc ggctggtgga gatcggggcc gagctgctgg ccatcagcgc cgcctgctcc
     2581 cgcgccgttg cgctggtgaa gcaggacccc tccagccgcg gccccatcga gatggccgat
     2641 gtcttcagcc gccaggcggc gcggagagtg cgctcgctgt tccggcaggt cttccggaat
     2701 gacgacacgg cgacctaccg tctcgcgcag gaggtcgtga agggacagca cctctggctg
     2761 gaggagggaa tagttgggtg ggagggcggg aaggagtagg caatgcagaa tgcccaatgc
     2821 ccattgcaga aggggaaggc ccatctgcaa tcggcattgg gcattgggca ttctgcattc
     2881 actttctgac ctcaacccgc agttccatcc acccttcgac ttggtagtac tccacccgca
     2941 gccggcgccg cccgcctctc aacggggcga tcgcgagggc ggactcgtgc gcttcccatc
     3001 ggtcgatcgc cagctggtca tcgatccaga ctcggattcc atcgtcactg atggtgacga
     3061 ggtcgtactc ccccgccggc agctccacct ccccttccgc cagtaccccg aaccgctggg
     3121 gcggaaaccc cggcaggcgc ggccgggacc acatgtagtc gagggccggt tcccgccgcg
     3181 ccgccagggg cggaccggcc agcgcggcac gaaacgcctc gacccgggtc cgggggtcgc
     3241 tggtgctgtc ccaggcggcg acccggaccg cccagtggac cggggcgaca aagcgccggt
     3301 aggtgaagcg gtagggtgcg ccggcggcgg tccgagcgcc gttaggcgcg atcacttccc
     3361 cgccccggta ttccagctcg atccaccagt cggtcaccgg cgcctccacc ggggtcacca
     3421 ccaccgtatc accgacatcg cccgcgctgt ccgatagcaa cctcacgccg tgggcggaca
     3481 gcaggcgcca ggtgccggtc gggcccagca ccgcgagcgc caggggaccc cgcaggtagg
     3541 cgctgtcggc caggcgggcc ggccacagct tggggctccg ccagtcgtag ggaccccact
     3601 ggtcgatcag gatggtgtga cggccctgac gggccccggc gggaagcatg ggatcatggg
     3661 ccccgggaag ttggggcgga gcgtcccggt gggccgggtc cggtcgccag agagtgcggc
     3721 cgaggaggcc gccatcgatt cgttcgagcc ggtcggcgcg aaaaccggag gtgtcacccg
     3781 ccgcggaaag caacgtgtcg gtgaaaccga agacattctt caccagcctt acgttgcggg
     3841 tatgctccag ccggagggcg agcccgttac cgagaaagcg attgccctcg atccgatagt
     3901 cccgactccg ggtatcccga tgccggggat agccccactc cgagggctcg attcggttcc
     3961 accagagacg gatggcggtc cgatccccgt cgaagatgtt gcccgcaatc agattatcct
     4021 gtccgtgctc gatggccagg ccgacgacgt tgcgagcgaa ataattgtcg cgaatctccg
     4081 attcgaagct gtagccgccc cacacaccgt aggtcgagcc ctccagccgg ttcccgatca
     4141 tccggttgcg gctgaaggtc acctcgatgc tgttggcggc ggcgaaactg aagtcgttgc
     4201 cgaagaacag attgtcgttg gccccaccct ttcccgtctc catggtggat tggccggccc
     4261 agagaaacag cccgtcgccg ctgtgggtca tcgagttata ggccacgacg ttgtgcgagc
     4321 tctgctcgta cagcagcagg gccgccgagt cctggccccg gctgtacccg ccgtggacgt
     4381 agccccgcat gcaccaatcg gcccggttgt gcatgatggt gttgtagctg gcgcggtaga
     4441 ggccgatgcc gaggcccgat tggaaggaga agtcgttatt ccagatccgg agccgggagg
     4501 aacgcaccag cagcagtcca ttcatgccct gccgtgccac gttgtcccgg atttcgccgc
     4561 cgtccactcc ggtgaggtag atcccggcac cgtatcgcag ccacgcgtcc tgctcgttcc
     4621 ggtgataggt cagccagtcc accaggcttt cgtggcccgg accgctccag agccgaggct
     4681 tccagttgta gctcacgtcg ttccgggcca gaagcaggtt gcgcacgttg cgagcgagca
     4741 ccccgacctt gaagccccga atccgggcgt tccgcagcgt aatgccccgc ccgtcctcaa
     4801 tcagcacccc gatgccgtgg tactcgtcag gccgtccccc gggatcgccg ccgctcagca
     4861 ccgccccccc gaagtccacc acgattcccg agccccgaac gcggagaacc accgaatccc
     4921 ctgccagggg gctcagccgg tattcaccgg cccggatgat gaccgagcgg gtgatcacca
     4981 gtcccgggct cagcgggacc gtatcggccg gaatcgttcc ggggccggac aacaggaatg
     5041 cgaatgctgc gatcataggc gctaggtttc aggcagtctg acacctggag accacatggc
     5101 caccgccgaa ggacgggtcc tcccgttcgt gggccccgaa cacatcgaag tcgccgtgct
     5161 ggagactttc ccctaccagg ggcccgaaca ggaggtcgtg acggaaacct ccgagttcag
     5221 cgccgtctgt ccctacagcg ggctgccgga ctacgcccgg ctcacggtca gttacgttcc
     5281 ggacgcgaag tgcgtcgagc tcaagagtct caagtactac atcaccagct accgtaacgt
     5341 cggcatcttt caggagcacg ccaccgcccg catggccgag gacctgttcc gcctgctgga
     5401 acccaggcgc ttgacggtgc ggaccgggta caacccacgg ggcggcttcg agacgacctg
     5461 cacggtgaca ctggacggac cgacgggttg acggaccgac ggaccatagg acgggaatcc
     5521 gtccgtcagt ccgtctgccc atccgtccgt ctggtgacca gccgcttggc caggcttcga
     5581 agccgctccg attcgggagc cgggccgggc accgcctgct ccccctcccg cgcgcccagc
     5641 aatgccgcga ccagagccgc cccatccccc gggccggccg ccggaccggc ccaggcgcgg
     5701 tccacccgcg attcatgatg cgcggtccag agcgccacct cggccgaggc gatggcggcg
     5761 tggccgcccc catccagctc gtcctgctgg acgaagggaa tccggcggac agccgacagc
     5821 acttcaaccg ctgcgtcgtt cgcctggagc gcctcgatca catccgggag gaagtcgcgg
     5881 cggcccagga gcagctggga cagcgcgacg ttcgcggcca ccgcggtcca ggctgtggtg
     5941 gcatcgggat gggtcagcat gacggtgtgc caagtaccgc ccaccaggtt gcggggttgg
     6001 ctggccgcgg cgagggcgat gggaacgacc cgcaccagcg gccccgggtc cgccatgccg
     6061 ccacccggcg gcaggggggc gtcatagcgc gccagatgct ccagggcttc accggtgcgg
     6121 ggcccgatgc cgcggccgtc gcgccgccac caggtgatcc accgctccgt caggcgccgc
     6181 aggtccacct cggtttcgag cagctcctcc gccagcaggg ccgccaacgc ggcttccccg
     6241 accaactcgc cggccggatc ggtcccaccg gcgtgggccc gcgccagccc gaccagcacg
     6301 cctcgcgcgc gattcgcaac gggaatggga cgggccacgc gtgcctccaa tcggtgcggg
     6361 cgagtcgcta tctttcgcgc gcgcctgaaa gaacctcagc cgaccctcgc tgtgaaggcc
     6421 gccccgtgaa tcgcgatacc ctcaccatca ccgacaatcg aaccgataag agctacgagc
     6481 tgccgatcac cgacgggacc atcaaggcga tggacctgcg acagatccgg acctcggagg
     6541 acgacttcgg cctgatggcc tacgatccgg ccttcatgaa taccgcggcg tgccggagcg
     6601 ccatcaccta catcgacggc gaccggggca tcctccgcta ccggggctac ccgatcgaac
     6661 agctggccga gcgggccagc tttctggagg tggcctacct gctggccgag ggcgagctgc
     6721 ccacggggga acagctcgac cggtggacca cggacatccg ctaccacacg tacgtccaca
     6781 ccaacatcat caagttcctg gaggggttcc gctacgacgc ccatcccatg ggcatgttgc
     6841 tggggacggt gggggcgctc tcgaccttct atcctgacgc caagaacatc tccgacccgt
     6901 ccaaccgcca cgtccagcgg gtccggttga tggccaagct gccgaccctc gcggccttcg
     6961 tgttccgcca ctcgcggggg ctgccgtacg agtttccccg gaacgatctc gagtacatcg
     7021 gcaactacgt caacatgatg ttctcgatcg ggggccggca cgagcccaac cgggtgctgc
     7081 agcgggccct cgagattctg ctgatcctgc acgccgacca cgagcagaac tgctccacca
     7141 gcgccgtgcg cgcggtaggg tcctctcacg tcgacccctt ctcggccgtc tcggccggga
     7201 tcggcgcgct gtacggcccg cttcacggcg gggccaatga ggcggtgctg ctgatgctgg
     7261 atgagatcgg gaacaagaag aacatccccg ggttcatcga gaaggtgaag aagggcgagg
     7321 gccggctcat gggcttcggc catcgggtct acaagagtta cgacccccgg gccaagctga
     7381 tcaaacacac cgccgatgag gtcttccagc agaccggcct caaccccaag ctggagatcg
     7441 ccctggagct ggagcgcatc gccctggagg acgactactt tatcaagcgc aagctttatc
     7501 ccaacgtgga cttctattcc ggcctgatct accaggcgat ggggtatccc accgactact
     7561 tcacggtact gttcgcggtg ggccggctgc cgggttggct ggcgcagtgg gaggaaatgc
     7621 tgatggacaa ggagcagaag atcgcccgcc cgcgccagat ctacaccggg cacccggaac
     7681 ggcccttcgt ccctctggaa cagcggtgaa ctaccggggt cacggctcac tggcgaccgc
     7741 ttgggccacc cgttccgttt ccaacttcca ttcccgcggc acatcgccct cgaggtaggt
     7801 gtagccctcc agcccggcga ggtaatcggc gatgaacgcg ttggcatcgg tgcgcgagag
     7861 atccttcgcg ttccccacct tgcgccggaa cgtggccatc agatcgttgg cccggaactg
     7921 cacgtagttg agcacttccg tgaccgtgtc cccttccacc agatcggtca cttcataggt
     7981 cccattggtg agcttgatgt ggaccgcgtt ggtatcgccg aacaggttgt gcaggtcacc
     8041 caggatctcc tgataagccc cagtgagaaa gatgcccagg atgtacggtt caccgtcctt
     8101 ccaggggtgc agctccaacg acggcttgcc ccgccgcccg cccgagaacc ggtcgatcac
     8161 cccgtccgag tcgcaggtga tgtcctgcag cgtgccgcgc cggtcgggga cctcgagcag
     8221 ccggtggatc ggcatgatgg gaaagagctg atcgatggcc cagttgtcgg gcagcgactg
     8281 gaagaccgag aaattgcaga agtagcggtc gaccagggtg gactcgagat ggttctggat
     8341 gtcggcgtac gccggtttgt cgggcgcgat gagcttggcg atggcattca tcgtcgccag
     8401 gtagtactcc tcgatatcgg ccagctgctt cagggtgatg gcgtcgctgg caaacagctc
     8461 ctgggcccgc tccttggcga acagggcatc gtggaacgcc tcctccacgc tggccagcgt
     8521 gagggcgtca aagttctcct tgagctcctt cagcaccttg tgcgacttct tgcggtccac
     8581 cgccggcacc tgcggctcgg tctgggcttc cacgtcggtc acgttgacca gcagcagcgc
     8641 gtggtgcgcc gtgagggccc ggcccgactc cgagatgatg ttcggcatcg ggatgttgag
     8701 ctggcggcag gtgtttccca gcaggtacac cacgtcgttg gcgtactcgc ccagggtgta
     8761 gttcacactg gcaggccggg tagagcggga cccgtcgtag tcaaccccca ggccgccgcc
     8821 cacatcgacg tgggtcagat tgaagcccag ctcccggatt tcggcgtaga accggccgat
     8881 ctcctcgagc cccttcttga cataccggat atcggggatc tggctgccca ggtggaagtg
     8941 gaccagccgg agcaagtcct ttcggcccag ctcttccagc cggcccagta accggatcag
     9001 ctggggcgcc gataacccga atttggactt ctcgcccccg ctcttggccc agcggcccga
     9061 cccctcggtg gccagcttga tgcggacgcc cagcacgggc tggatcccca tgtcatcggc
     9121 caccctgagc acgtcgtcca gctccgccag ctgctccagc acgatgaaga cctggtggcc
     9181 cagacggtgg cccatgaggg ccagccgcat gaactcctc
//
LOCUS       DASWKS010000361        11268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2047135, whole genome shotgun sequence.
ACCESSION   DASWKS010000361 DASWKS010000000
VERSION     DASWKS010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2047135"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VGA78_10375"
     CDS             complement(<1..642)
                     /locus_tag="VGA78_10375"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9894320.1"
                     /translation="MRVLSDNVVTHLAQVSDWPDLAGTRYAAIEELGRGGMGAVFRAR
                     DERLDREVAIKVLRAVDVPEGITERLSREARILARLEHPGIVPVHDLGVLPDGRIYYV
                     MKLVRGQRLDAWLATNPLERERIELLKRVAETLAFAHVRGVIHRDLKPSNIMVGEFGE
                     VLVLDWGVAKLTDGRAEGPTDRRTDGPTDGSVGVPAPTPVSPVPTAASTTAHGT"
     gene            complement(717..1331)
                     /locus_tag="VGA78_10380"
     CDS             complement(717..1331)
                     /locus_tag="VGA78_10380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894321.1"
                     /translation="MYTYIRLRWRLEPDEAEDLTQEFFARALQRDFFIQYDPARARFR
                     TWLRVGIDRMIANLREAAGRLKRGGGAVTIPLDLAEVERDLATRAGAPLPDDDELFRR
                     EVARTLFTFAVDALKNETERNGKTAQFRLFVEYDLEGPDSEPRPTYADLAAAHALPVT
                     QVTNHLAAMRRRFRILVLERLREMSGSEAEFRAEARDLLGLEPG"
     gene            complement(1454..2206)
                     /locus_tag="VGA78_10385"
     CDS             complement(1454..2206)
                     /locus_tag="VGA78_10385"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX9894322.1"
                     /translation="MRLILANGAVYLLQMAGPQGLEQLLVFVPRYVLSRPWTLVTYMF
                     LHGPLFHIFFNMLSLFFFGPRVESRLGGRRFLTLYFVSGIVGALLSLIFTPDAAIVGA
                     SGAVFGVMLAFASFWPRDQILIWGILPVEARVMVIAMTVMSLFSGFRGGGGIAHFAHL
                     GGFLGGWLSLKWFERRSDGRKWQAKAAPARPRESSESSLARWRRIQRDGLHEVNRAEL
                     DRILDKISSQGMQSLTPGDREFLERFSTRETT"
     gene            complement(2218..3720)
                     /locus_tag="VGA78_10390"
     CDS             complement(2218..3720)
                     /locus_tag="VGA78_10390"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX9894323.1"
                     /translation="MTSSLEARLVELEAASRPLDPDPAGRAALFGPVFDYAERFLDAL
                     PSLPAYVVTMDKGRGVLDLQFREDGRSIERVLSVLGDQVDRPGLNPASGGHLGYIPGG
                     GLYASALADYLADITNRYPGVFFSSPGATRVEHQVVRWTADMVGFPAGAGGTLASGGS
                     IANLICLAAARDAHGIRSRDVERVVVYLSSQTHHCITKNLRLLGLGECVLRYLPLDQR
                     FRIRAEALASQIEADRRAGLSPWLLVASAGSTDVGAIDPLDSLADLAAEHRLWYHVDA
                     AYGGYFLLVPGMRERFRGIERADSTVLDPHKTLFLPYGLGIALVRDQATLAQAFRSDA
                     PYLQDTLTEREEDSPADLSPELTRPFRGLRLWLPLLVHGLAPFRASLEEKLLLTQWLH
                     AELRTRGWEVGPEPDLSVITYRWVPDGLDPELVNRLNARVVELIKQDGRVYVSSTLIE
                     GRYTIRYAGVTHRTHLTTVRLLLDLLEGFAGQAQRELVAPGAGAGVRSTV"
     gene            complement(3717..4829)
                     /locus_tag="VGA78_10395"
     CDS             complement(3717..4829)
                     /locus_tag="VGA78_10395"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HEX9894324.1"
                     /translation="MQRPPPDWLHHLADEADAAFLYRALASSEPAADRARIYSQLSEV
                     EDRHVKMWQRLLAESGHEVRAPSPSRRARLMAWMGRRLGPNFLLPMLLEEEGREVRGY
                     LRLHQDSTGGAADTALTLARESKQHAESLAGLSGRGAEPWHKTGAGGVLRNVVYGFND
                     GLTANFGLLAGMFGAQDSVATVGHAVVVAGLAGVVADALSMGASGYLAAKSEREVHEH
                     EIAMEREEIRLMPELEEEELRLVYQAKGVPEAQARQFAASVMADPERALEEKVREELG
                     ISHSHSSPGREGWITGTATAVGAFIPVAPLLISTDAWAVWTSFGLAMVSHFGVGAARS
                     LFTGRGGFRSGMDMFVVGLGVAVIGYFIGEYMVQRL"
     gene            5081..5623
                     /locus_tag="VGA78_10400"
     CDS             5081..5623
                     /locus_tag="VGA78_10400"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894325.1"
                     /translation="MAMESVRLVQEEALVPLARGGDPAAQEALYRAFSGPVYGLARRI
                     CRTREDAEDVVQETFLEVFRSLGRFRGDGSLWGWVRSITASKALMRLRRNKYRDADEL
                     SDDVATPPREQPALRMDLEAALERLSDTARAVVWLHDVEGYTHDEIGQLMGKSVSFSK
                     SQLARAHARLRRWLGEEVAT"
     gene            5620..6240
                     /locus_tag="VGA78_10405"
     CDS             5620..6240
                     /locus_tag="VGA78_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894326.1"
                     /translation="MNHLTLEQLLDLREPGLEPGQAAAREHLADCPRCQAELDRLGQR
                     VARLKALPAPRPSRDQFREIRSRHVAERRRRSAARSVALVLALAATVALAVVLRPGAG
                     PGDADPGSSAASELAAIRAQSQALEETLREYNPDSRAIDGRTAAIADRIEDQLSSLDR
                     QIELLDLMNLADPMRDTRQLRLWRERVGLLDALVDVHLTRASYAGL"
     gene            6302..7219
                     /locus_tag="VGA78_10410"
     CDS             6302..7219
                     /locus_tag="VGA78_10410"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX9894327.1"
                     /translation="MKPLISLTLAVLLAQPLAAQERTRDTARSHPKSLQRIWIDGQDM
                     TERFLPLMQRRARLGIVVKMLDAQETDSLGAFVQSVTPGGPSAKAGIRSGDIITKLDG
                     NSVLTTPGRRLAEEESAPGVRLIELAAKLDPNDTVQVEFLRGDARRTVSVVTGDEGLM
                     AFEGNRFYFRYPEGESRERIQLPPGVRVEPFELGPDFSMLERRPSVAMAFGGGALADL
                     ELAPINPDLGSYFGTTEGVLVTRAPSNHALGLKGGDVILSVDGRKPQSAGSLLRILRS
                     YDDDETVKLEILRQKQRQTLSGKLGRARD"
     gene            7290..8267
                     /locus_tag="VGA78_10415"
     CDS             7290..8267
                     /locus_tag="VGA78_10415"
                     /inference="COORDINATES: protein motif:HMM:NF022825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3187 family protein"
                     /protein_id="HEX9894328.1"
                     /translation="MALHATPGRLRLHGLALLVLGATGSAHSQGLPAYRPINPAITSR
                     SALGFDPVGETRKGWQTAIRVDYGNVLEAQTRSVADYLLDAELSRINLSIGRTQGRWH
                     LQGDLPLESAQSGALDPFITWWHGVFGFDEGRRDERPENQYEYFIQFPDQVRVVRPLP
                     GTSLGDLRISAGYRHGADWMTTLIAAFPTNTRPDGWGLEAVAMGLQTAARRWLVPDRL
                     GWEGSAGLGYSPRAGSLARWQRTWFASASSGLRWRFWGRQSVYSNLLFHTGAWRGTTL
                     QSLDRPDLSLDFGFLLKAGDGPEILAGMVEDLYPFGPAVDLVLRLGVRW"
     gene            complement(8245..8442)
                     /locus_tag="VGA78_10420"
     CDS             complement(8245..8442)
                     /locus_tag="VGA78_10420"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEX9894329.1"
                     /translation="MAFKPFPTPLGQRVFDSICAVCWGEWVKQQQALINHYGINLQDP
                     QAKQFLYQQLEQFLFTSAPQA"
     gene            complement(8520..8795)
                     /locus_tag="VGA78_10425"
     CDS             complement(8520..8795)
                     /locus_tag="VGA78_10425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894330.1"
                     /translation="MLDMLIFLGAGLGGFVLARDFVKRRLRFVDAVQHPATPWIVGIG
                     AALVSWPLAALPLLTTATSAIFGLGTGLGTRSGAKALRSGERLPAKR"
     gene            complement(8886..9347)
                     /locus_tag="VGA78_10430"
     CDS             complement(8886..9347)
                     /locus_tag="VGA78_10430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894331.1"
                     /translation="MSELNSPRTVIVALVLLAHTAVGVLGGIALDRVIFRPGPLRAEM
                     AAFGPDRPGSSRFDRVDGSRRGGGPPPGMRHRMLDALGRDLSLTQDQRQKIDSIFLGQ
                     EPAYRAVREEFAPRLRGLMEETRLSIEKVLTPEQVQRFRERHRRHLEDERL"
     gene            complement(9340..9735)
                     /locus_tag="VGA78_10435"
     CDS             complement(9340..9735)
                     /locus_tag="VGA78_10435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894332.1"
                     /translation="MKERPEQEDLAIRDALRRASDDADPDAATRQRVRARILAQAGPE
                     LRRRRMQSLAERLLRTARWTIPAAIAAALVLAFFVARPRVPDAGMELSPAALFLGGVI
                     GIVPADSAVDAAVGSADGTWFLAEVVSHE"
     gene            complement(9719..10291)
                     /locus_tag="VGA78_10440"
     CDS             complement(9719..10291)
                     /locus_tag="VGA78_10440"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9894333.1"
                     /translation="MTVAEETDLIRRILTGDAEAFSGLVDAYMAVGYRTAYRVLGHRQ
                     DAEDVLQDAFLQALRHIDQFEVGRPFLPWFLRIVVNRALSIRGRLARRAADELSELEV
                     DPSPGPALVTERADAGGRVRAALAALPERERMAVQLVELEGMTSAEAGEVLELPAGTV
                     RWLLHRARNELRMVLAPTQDWREGHYEGTA"
     gene            10476..11051
                     /locus_tag="VGA78_10445"
     CDS             10476..11051
                     /locus_tag="VGA78_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894334.1"
                     /translation="MSRSLARAATTAGLVLFTILVVLPDPAAGQGPGGRMGGGRGPGG
                     MPRPNFDPVLFDGPPVPEEMVDLVQLEPAQYEPYAGQYRIFMQETKAVRDSVLEMRRL
                     MRDMMGQMGGAGASGERGSRDRGKMEARRLKMEAMQKQMQTLERHQKAFDENLKSLLS
                     REQFKNYERWRQEQRKTVEGRPETVEDGRRR"
BASE COUNT         1962 a         3894 c         3666 g         1746 t
ORIGIN      
        1 ggtaccgtgc gcagtggtag aggccgcagt cggtactgga gaaaccggcg tcggcgcggg
       61 taccccgaca gaaccgtccg tcggtccgtc ggtccgtcgg tccgtcggac cctccgcccg
      121 tccgtccgtc agttttgcca ccccccaatc cagcaccagc acttcgccaa attcgcccac
      181 catgatgttg gacggcttga ggtcgcggtg aatcaccccc cggacatggg cgaacgccag
      241 cgtctccgct acccgcttga gcaattcgat gcgttcccgc tcgagcggat tggtcgcgag
      301 ccaggcgtcc agccgctggc cccgcaccag cttcatcacg tagtagatcc ggccgtccgg
      361 caacacgccc agatcgtgaa ccggcacaat gccggggtgt tccagccggg ccaggatccg
      421 cgcctcgcgc gacaaccgtt ccgtgatgcc ctcggggaca tcgaccgccc ggagcacctt
      481 gatcgccacc tcacggtcga gccgctcatc ccgggcccga aagaccgcgc ccatgccgcc
      541 ccgccctagc tcctcgatcg ccgcgtagcg ggtgccggcc aggtcgggcc agtccgagac
      601 ctgggccaga tgggtgacga cgttgtcgga aagcactctc atcccgcccc cagctccggt
      661 ctccctgctc cctgctccct gctcccttct ccctgctccc tgcccctgga cttgcctcac
      721 cccggttcta ggcctaacag atcgcgcgcc tcggcccgga attccgcctc gctgcccgac
      781 atctcccgca accgttccag caccaggatc cgaaaccgcc gccgcatcgc ggcgagatga
      841 ttggtcacct gcgtcaccgg caacgcgtga gccgcggcca ggtcggcata ggtcggccgt
      901 ggctcgctat ccggtccctc cagatcgtac tcgacgaaga gccggaactg ggcggtcttg
      961 ccgttccgtt cggtctcgtt cttcaacgca tcgaccgcga acgtaaagag ggtgcgcgcc
     1021 acttcgcggc gaaacagctc atcatcgtcc ggcaagggcg ctcccgcccg ggtcgccagg
     1081 tcgcgctcga cctcggccag gtcgagcggg atcgtcaccg cgccgccgcc gcgcttgagc
     1141 cggcccgcgg cctcgcgcag gttggcgatc atccggtcga tgccgacccg gagccaggtg
     1201 cggaagcggg cccgggccgg atcgtactga atgaagaagt cgcgctgcag cgcgcgcgcg
     1261 aagaactcct gggtcaggtc ctcggcctca tccggctcca gccgccagcg cagccggatg
     1321 taggtgtaca ccggccgcca ataggtggcg gcgaggagct cgagcgcccg ttccctgacc
     1381 ccggcgtcat ccgcgcccag ggccctgatg accgagaccc tggtggaggg gaatcccgcg
     1441 ccaccctcgc tgattaggtg gtctccctgg tgctgaagcg ctccaggaat tcgcgatcgc
     1501 ccggcgtgag gctctgcatg ccttgcgagc tgatcttgtc gaggatccga tccagctcgg
     1561 cccggttgac ttcgtgcagg ccatctcgct ggatgcgtcg ccagcgcgcc agactggact
     1621 cgctggattc gcgcggccgg gccggagccg ccttcgcttg ccatttgcgg ccgtccgaac
     1681 gacgctcgaa ccacttgagt gagagccagc cgcccaggaa tccccccagg tgagcgaagt
     1741 gggcgatgcc gcccccaccc cggaacccgg agaacagcga catcaccgtc atcgcgatca
     1801 ccattaccct cgcctcgacc ggcaggatac cccagatcag gatctggtcc cggggccaga
     1861 agctcgcgaa cgccagcatg acgccgaaga ccgccccgga cgcgcccacg atcgcagcgt
     1921 ccggcgtgaa gatgagcgag agcagggcgc ccacgatgcc gctcacgaaa tagagcgtca
     1981 gaaagcgccg gccgcccagc cgagattcga cccttggtcc gaagaagaac aaggacagca
     2041 tgttgaagaa gatgtgaaag agcggaccgt gcaggaacat gtaagtcacc agcgtccacg
     2101 gccgactcag cacgtatctc ggcacgaaca ccaggagctg ttccagaccc tgcggcccgg
     2161 ccatttgcag caggtacacg gccccattgg ccaggatcag tcgcattacc cagggtgtca
     2221 tacggtagag cgtaccccgg ccccggcccc cggtgcaacc agctcgcgct gggcctggcc
     2281 ggcgaatccc tcgagcaggt ccagcagcaa cctgaccgtg gtgagatggg tgcgatgggt
     2341 gacgccggca taccggatcg tatagcggcc ctcgatcagg gtggagctca catagactct
     2401 gccatcctgc ttgatcagct ccaccacgcg ggcgttgagc cggttcacca gctcggggtc
     2461 gagcccgtcg ggcacccagc ggtaggtgat gaccgagaga tcgggttccg ggcccacctc
     2521 ccagcctcgc gtacgcaact ccgcgtgcag ccattgcgtc agcagcagct tctcctccag
     2581 gctcgcgcga aacggcgcga gcccgtgaac cagcagcggc agccatagcc gcaggccccg
     2641 gaaggggcgg gtcagctcgg gggagagatc ggccggcgag tcttcttccc gctcggtcag
     2701 cgtgtcctgc aggtaaggcg cgtcggagcg gaaggcttgc gccagggtgg cctggtcccg
     2761 caccagcgcg atccccagcc cgtaagggag gaacagggtc ttgtggggat cgagcacggt
     2821 ggaatcggct cgttcgattc cgcggaaccg ctctcgcatg cccggcacca gcaggaaata
     2881 gccgccgtac gcagcgtcga cgtgatacca gagccgatgc tccgccgcca ggtcggccag
     2941 tgaatccagg ggatcgatcg ccccgacatc ggtggagccg gccgaggcca ccagcagcca
     3001 agggctcaag ccggcccggc ggtcggcctc gatctgcgag gccaacgcct cggcccggat
     3061 ccggaaccgc tggtccagcg ggaggtagcg caacacgcac tcccccagac ccagcagtct
     3121 caggttcttg gtgatgcagt gatgggtctg gctgctcagg tacaccacca cgcgctcgac
     3181 atcgcgggac cggatcccgt gcgcatcgcg ggccgcggct aggcagatca ggttggcgat
     3241 gctgccgccg gacgcgaggg tgccgcccgc gccggcgggg aatccaacca tgtcggcggt
     3301 ccaccggacc acctgatgct ctactcgagt cgctcccgga ctggagaaga acacgccggg
     3361 atagcggttg gtgatgtcgg ccaggtaatc cgccagcgcg gacgcataga gaccgccgcc
     3421 tgggatgtag cccaggtgac caccactggc gggattgagc ccgggtcggt ccacctggtc
     3481 gccaagcacc gacaacaccc gttcgatgga tcggccgtct tcccggaact ggaggtccag
     3541 gaccccccga cccttgtcca tggtgaccac atacgccggc agcgagggca gcgcgtcgag
     3601 gaaacgctcg gcgtagtcga ataccggacc gaacagggcc gcacggcccg ccggatcggg
     3661 atcgagcggg cgggatgctg cttccaactc caccagccgg gcttcgagcg acgacgtcac
     3721 agccgctgca ccatgtattc accgatgaag tagccgatga cggcgacacc cagcccgacc
     3781 acgaacatgt ccatgccgct gcggaaaccg ccgcggccgg tgaagagcga gcgggccgcg
     3841 ccgaccccga agtgcgacac catcgccagg ccaaaggaag tccaaaccgc ccacgcgtcg
     3901 gtgctgatca gcaacggcgc caccgggatg aacgcgccca cggcggtggc ggtcccggtg
     3961 atccatcctt cgcggcccgg gctggagtga ctgtggctga tccccagctc ttcccggacc
     4021 ttctcttcca gggcccgctc gggatcggcc atgaccgagg cggcgaactg tctcgcctgg
     4081 gcttccggca cgcccttggc ctggtacacc aggcggagct cttcctcctc cagctcgggc
     4141 atgagccgga tttcctcccg ctccatggcg atctcgtgct cgtgcacctc gcgttcgctc
     4201 ttggcggcga ggtagcccga tgcgcccatc gagagcgcgt cggccactac cccggcgagc
     4261 cccgcgacca ccacggcgtg ccccaccgtc gccactgagt cctgggcgcc gaacatgccc
     4321 gccagcaatc cgaaattggc ggtcaggccg tcattgaatc cgtaaaccac gttccggagc
     4381 acgccacctg ccccggtctt gtgccacggt tccgcacccc tccccgacag gccggccagg
     4441 ctctcggcgt gctgcttcga ttcccgcgcg agggtcagcg cggtgtcggc cgcacctccg
     4501 gtcgaatcct gatgcagccg cagatagccc cggacctcgc gaccctcttc ctccaggagc
     4561 atgggaagca ggaagttggg acctaggcgg cgccccatcc aggccatgag gcgagcccgc
     4621 cggctgggag acggggctct gacctcatgg ccgctctccg ccagaagccg ttgccacatc
     4681 ttgacatgac ggtcctccac ctcggacagc tggctataga tccgggcccg gtcggcggcc
     4741 ggctcggatg aagccagcgc ccggtagaga aaagccgcgt cggcttcgtc ggcgaggtgg
     4801 tggagccaat cgggaggggg acgctgcatg gggggaaaat agcgtccagc ggcacgttcc
     4861 gggttccaga ttccgggtgc ggtgcttggt gctgtgccgg tgcctgcgtg cagggtaccg
     4921 atcagcgcgc agggagcgca cccagcccat ggcacgctgg caccgcacgc tggcatcgca
     4981 cgctggcacc gcacctggaa cccggaacca ggaacgcgga acgttccgcc cctgcgacca
     5041 tccccccctt cagcgcatca tattgtgcgt gacgggagcc atggccatgg agagcgtcag
     5101 gttggtccag gaagaggccc tagtacctct tgcccgaggg ggagaccctg ccgctcagga
     5161 ggccctgtac cgggccttct ccggaccggt ctacggcctg gcccggcgga tttgccgcac
     5221 ccgggaagac gccgaggacg tggttcagga gaccttcctc gaagtcttcc gcagcctggg
     5281 ccggttccgg ggcgatggca gcttgtgggg ttgggtgcgg agcatcacgg ccagcaaggc
     5341 gttgatgcgg ttgcggcgga acaagtaccg ggacgcggac gagctgagcg acgacgtcgc
     5401 gacaccaccc cgcgagcaac cggcgctcag aatggacctg gaagccgctc tggagcggct
     5461 ctccgatacg gcgcgggcgg tggtatggct gcatgatgtc gaaggctaca cccacgatga
     5521 gatcgggcag ttgatgggga aatcagtgag tttttcgaag tcacagctgg cgcgggccca
     5581 tgcgcggctg cgccgctggc tgggagagga ggtcgcgaca tgaaccacct cacgctggag
     5641 cagctgctgg atctgcgaga gccggggttg gagccgggtc aggcagccgc ccgcgagcac
     5701 ctcgcggact gcccacgatg tcaggccgag ctcgaccggt tgggacagcg ggttgcccgg
     5761 ctcaaggcgc ttcccgcgcc ccgcccctca cgcgatcagt tccgggagat acggtcccgc
     5821 catgtcgccg agcggcgccg ccgctcggcg gcccggagcg tagccctcgt gctggcgctc
     5881 gcggcgacgg tcgcattggc cgtggtactc cggcccggag ccggcccggg agacgctgac
     5941 ccggggagca gcgcggccag tgagctggcg gcgatccggg cccaatccca ggcgctggaa
     6001 gaaaccctgc gcgagtacaa ccccgacagc cgtgccatcg acggccggac cgcggccatc
     6061 gcggaccgga tcgaagacca gctctcatcg ctcgaccgcc agatcgagct gttggacctg
     6121 atgaacctgg ccgacccgat gcgcgacacc cggcagctcc ggctctggcg cgaacgagtg
     6181 gggttgctcg acgccctggt cgacgtgcat ctcacccggg cgtcgtatgc gggactatga
     6241 accagtcgcg agtcgtgagc cacgggtcgc gcgagcttat ttcggaagga atggttacat
     6301 catgaagcct ctgatttccc tgacgctggc tgtcctgctc gcccagccgc tggcggccca
     6361 ggagcggacc agggacaccg ctaggtctca tcccaagagc ctgcagcgga tctggatcga
     6421 cggtcaggac atgaccgaac ggtttctccc gctgatgcag cggcgggccc ggctcggcat
     6481 cgtggtcaag atgctcgatg cccaggagac cgactcgctg ggcgccttcg tacagtcggt
     6541 gaccccgggc ggcccgtcgg ccaaggcggg cattcggtcc ggcgacatca tcaccaagct
     6601 cgacgggaac tcggtgctca ccaccccggg ccggcgactg gctgaggagg aatccgctcc
     6661 cggcgtccgc ctgatcgagc tggccgccaa gctcgatccc aacgacaccg tgcaggtcga
     6721 attcctgagg ggtgacgccc gccgcaccgt gtcggtggtc accggcgacg agggcctgat
     6781 ggcgttcgag ggcaatcgct tctacttccg ctatcccgag ggtgaatccc gcgagcggat
     6841 ccagctgccg cccggtgtcc gggtcgagcc cttcgagctg ggaccggact tcagcatgct
     6901 ggaacgaagg cccagcgtgg cgatggcctt cggtggaggc gcgctggcgg acctggagct
     6961 ggcccccatc aatcccgatc tcggcagcta cttcggcacg accgaggggg tcctggtgac
     7021 ccgggcgccc tccaaccatg cgctcggtct gaagggcggc gacgtcattc tgagtgtcga
     7081 cggccgcaag ccgcagagcg ccggcagcct gctccggatc cttcgctcct acgacgacga
     7141 cgaaaccgtc aagctcgaga tcctgcggca gaaacagcgc cagaccttga gcgggaagct
     7201 ggggcgggca agagactagg tcgaaggcgg tcgaagaggg tcgaaggggg cttgccttct
     7261 tcggccttct ttttgcctat tcttaacgca tggcgcttca cgccaccccg gggcgactcc
     7321 gcctccacgg tctcgccctg ctggtgttgg gggccacagg gtccgctcat tcccagggac
     7381 tacccgccta tcgccccatc aatccagcca ttacatcacg cagcgcgctc ggcttcgatc
     7441 cggtcggtga gacccggaag ggttggcaga ccgcaattcg ggtggattat ggcaacgtgc
     7501 tcgaggccca gacccgtagc gtcgccgatt acctgctcga cgccgagctg tcacgaatca
     7561 acctgtcgat aggacgaacc cagggacgct ggcacttgca gggcgacctg ccgctcgagt
     7621 cggcccagtc cggcgcactc gacccattca tcacctggtg gcacggggtc tttggatttg
     7681 acgagggccg gcgcgacgaa cgaccggaga atcagtacga gtacttcatc cagttcccgg
     7741 atcaggtgag agtagttcga ccacttccgg gcacatcact cggcgacctg cgaatcagcg
     7801 ccggttatcg tcatggagcg gactggatga ccacgctgat tgctgccttc cccaccaaca
     7861 cccggccaga tggctgggga ttggaagccg tcgcaatggg attgcagacc gccgctcgcc
     7921 ggtggctggt tcccgatcgg ctcggctggg aaggaagcgc cggcctcggg tacagtcccc
     7981 gggccggcag tctggcgcgc tggcaacgga cctggttcgc gagcgcgagc tcagggctgc
     8041 ggtggcgctt ctgggggcgc cagtcagtct actccaacct gctgttccac accggtgcct
     8101 ggcgtgggac cacactccaa tcgctggacc gtcccgatct ctcgctcgat ttcggattcc
     8161 tgctgaaagc cggcgacggt cccgagatcc tggccgggat ggtggaagat ctctatccct
     8221 tcggacccgc agtggacctg gtgctcaggc ttggggtgcg ctggtaaaga gaaactgctc
     8281 cagctgctga tagaggaact gcttggcctg cggatcctgc aggttgatgc cgtagtgatt
     8341 gatcagggcc tgctgctgtt tcacccactc gccccagcag accgcacaga tggagtcgaa
     8401 cacccgttga cccaacggag tgggaaacgg cttgaacgcc atctgcccgc gagtttgacc
     8461 gcagcggacg caactgactt ccggcatgga ctggaatcta gcgaaccgcc gggtcggcct
     8521 cagcgtttgg ccggcagtcg ctcaccagac cggagggcct ttgccccgct gcgagtgcca
     8581 agcccggtgc ccaggccgaa gatggcgctg gtggctgtgg tcagcagcgg caacgcggcc
     8641 agcggccagc tcaccagcgc cgccccgatt cccacaatcc acggggtcgc gggatgttga
     8701 acggcgtcaa cgaaccgcag gcgtcgtttg acaaaatcac gggccaggac gaatccaccc
     8761 agtccagccc ccagaaagat cagcatgtcc agcatggagc ccctcggcgt aaactggtaa
     8821 ccatcgttgt tccattacgg aacatagccc agttcggttt cgcccgctga ggtttccggt
     8881 cccggtcaga ggcgctcgtc ctccaggtgc cgtcgatgcc gctcacggaa cctctgcacc
     8941 tgctcagggg tcagcacctt ttcgatggac agccgggtct cctccatcag cccacgaagc
     9001 cggggagcga actcctcccg aaccgcccga taggccggct cctggcccag gaaaatcgag
     9061 tcgatcttct gacgctggtc ctgagtgagg gacagatcgc ggccgagcgc gtccagcatc
     9121 cgatgcctca taccgggagg tggccctcca cctcgccgac tgccatcgac ccggtcgaat
     9181 cgactcgagc ccggccgatc cggtccgaat gccgccatct cggcgcgaag cgggccgggc
     9241 cggaagatca cccggtcgag cgcgattccg cccaggactc caaccgcggt gtgggccagc
     9301 agcaccaggg cgacgatcac cgtgcggggc gagttgagct cactcatggg aaaccacctc
     9361 tgccagaaac caggttccgt cggcggaacc gaccgccgcg tcgaccgccg aatccgcggg
     9421 cacaatgccg atcaccccac cgaggaagag ggcggccggc gacagttcca tcccggcgtc
     9481 cggaacccgc gggcgcgcga cgaagaaggc gagcaccagc gccgctgcga tcgcggccgg
     9541 aatggtccag cgtgcggttc ggagcagtcg ctccgccagc gattgcatgc gacggcgccg
     9601 caactccggc cctgcctgtg ccaggatgcg ggctcgaacc cgctgccggg tggcggcgtc
     9661 aggatcggcg tcgtcgctgg cacgccggag cgcgtcgcgg atcgccaggt cctcctgctc
     9721 aggccgttcc ttcatagtga ccctcccgcc agtcctgggt tggcgccagc accatccgca
     9781 attcgttgcg ggcccggtgc agcagccagc gaaccgtgcc ggccggcagc tccaggacct
     9841 cgcccgcctc cgctgaagtc atcccttcca gctccaccag ctgcactgcc atccgttccc
     9901 gctcggggag cgcggcgagc gcggcgcgga cccgcccgcc ggcatcggcc cgttcggtga
     9961 caagcgccgg gccgggggac ggatccacct ccagctcgga gagctcgtcg gcggcccgcc
    10021 gcgccagccg cccgcgaatc gacagggccc ggttgaccac gattcggaga aaccagggaa
    10081 gaaagggccg gcccacctcg aactgatcga tgtgacgaag cgcctgcaga aaggcgtcct
    10141 gaaggacgtc ctctgcatcc tgccggtgcc ccaggacccg gtatgccgtg cggtacccta
    10201 ccgccatgta ggcatcgacc agaccgctga aggcttccgc atcgccggtc agaatccgcc
    10261 ggatcaggtc ggtctcttcc gccaccgtca ccggcgcaga gcctccgtcc gctgcaccca
    10321 acccccagtc catccgcgcg tccatgaggg attacgccgg ccgcccccct gctgttggcg
    10381 gacggccagg acttcgtcct cgctttcggc caacaaccgg ggccgccggc tcgtacttcc
    10441 agtgaactcg ctgctggagc ctcttcatgt acctgatgtc gcgatccctc gcccgggcgg
    10501 ccacgacggc cgggctggtt ctcttcacga tcctggtggt cctgcccgac ccggcggccg
    10561 gtcaaggacc tggcggccgg atgggcggcg ggcgaggccc cggtggcatg cctcggccca
    10621 acttcgaccc ggtcctgttc gacggcccgc cggtacccga agaaatggtg gacctggtcc
    10681 agctggagcc ggcccaatac gagccctacg ccgggcagta ccggatcttc atgcaggaaa
    10741 ccaaggccgt ccgggacagt gtcctggaga tgaggcgcct gatgcgcgac atgatgggac
    10801 aaatgggcgg cgcgggtgcg agcggcgagc gaggctcccg ggaccggggc aaaatggaag
    10861 cccgtcggtt gaaaatggag gccatgcaaa agcagatgca gaccctggag cggcaccaga
    10921 aggcgttcga tgagaacctg aaatcattgc tgtcacgtga acagttcaag aattacgagc
    10981 gctggaggca ggagcagcga aaaaccgtcg aaggaaggcc agagacagtc gaagacggtc
    11041 gaagacggta ggtatgagcc agagagagag tagtgaaccg ccttcgaccg ccttcgactc
    11101 tcttcgaccg ccttcgacta gtatttaagc accacgctcc cccacaaaaa cccggacccg
    11161 aacgcggtga acaccaccac gtctccggga ttcagccggc ccgcgcgaac gcattcatcg
    11221 agcgcgatcg gaatcgtcgc ggcggtggtg ttcccgaagc gatcgatg
//
LOCUS       DASWKS010000362         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3496153, whole genome shotgun sequence.
ACCESSION   DASWKS010000362 DASWKS010000000
VERSION     DASWKS010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3496153"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VGA78_10450"
     CDS             <1..844
                     /locus_tag="VGA78_10450"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX9894335.1"
                     /translation="AGANSPRKADYPAYMETGSENARGLHAIRVLEGRKDFTPSSLIA
                     AAYDSYLTAFEPLIPSLLKSWDQTSATSPLKSKLAEPVALLRAWDLRWSETSVPTTLA
                     IAWGDEMERRVSDAARRAGVSTEEYIATRATPEQRLQALATAADTLAARYGTWKTPWG
                     DINRFQRLTGDIVHPFDDAKPSIPVGFTSARWGSLASFGARTHPGTKKLYGTSGNSFV
                     AVVEFGDSVRARAVTAGGQSGNPASPHFNDQAVRYSKGNLREVYFYRPQLKGHIEREY
                     HPGG"
     gene            852..>1820
                     /locus_tag="VGA78_10455"
     CDS             852..>1820
                     /locus_tag="VGA78_10455"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX9894336.1"
                     /translation="MSQILLGKGEGPVWLLAKYGNRHGLVAGATGTGKTVSLMVLAEG
                     FSRLGVPVFMADVKGDVAGLAVAGTISPKLTERAAAIGLEGFAPEASPVVFWDLYGKV
                     GHPIRATVSEIGPTLLGRMLELNDVQSGVLEIAFTLADDQGMLLLDLDDLRSLLGFLG
                     DNRKEVSAQYGLISTQSVAAVQRALLSLEREGGDQFFGEPALELVELLRTDANGRGIV
                     NVLASDQLILKPRLYSSFLWLLSELFENLPEVGDLDRPKLVFCFDEAHLLFDDAPPAL
                     RQRVEQVVRLIRSKGVGVYFCSQLPDDVPNEILGQLGNRIQHALRAF"
BASE COUNT          307 a          607 c          613 g          293 t
ORIGIN      
        1 ggccggcgcc aacagtcccc ggaaggccga ctatccggcc tacatggaga ccggcagcga
       61 gaacgcgcgg ggcctccacg ccatccgggt actggaaggc aggaaggact tcaccccgag
      121 ctcgctcatc gcagcggcgt acgacagcta cctgacggcg ttcgagccgt tgattccttc
      181 tctgctcaag tcctgggatc agaccagtgc aaccagtccg ctcaagtcga agctggccga
      241 gccggttgcg ttgctccgag cgtgggacct gcgctggtcg gagacctcgg tccccaccac
      301 gctcgcgatc gcctggggcg atgagatgga acggcgggtg agcgacgcgg cccggagggc
      361 gggcgtctcc accgaggagt acatcgccac ccgggcgacg ccagaacaac gcctccaggc
      421 actggcgacc gctgccgata ctctcgccgc gcgctacgga acctggaaaa cgccgtgggg
      481 cgacatcaac cggttccagc gcctcaccgg cgacatcgtc catcccttcg atgacgccaa
      541 gcccagcatt ccggtcggct tcacctcggc ccgctggggc tcgctggcct cattcggggc
      601 ccggacccat cccggaacga agaagctcta cggcaccagc gggaacagct tcgtggcggt
      661 ggtggagttc ggcgatagtg tgcgggcgcg agcggtcact gcaggcggac agagtggcaa
      721 tcccgcctca ccgcacttca atgaccaagc ggtgcgctac agcaagggca acttgagaga
      781 ggtctacttc tatcgcccgc agttgaaggg ccacatcgag cgcgagtacc atcccggagg
      841 ctgacccgcc tgtgagccag atactcctgg gcaaagggga ggggccggtc tggctgctgg
      901 ccaagtacgg caaccgccac gggctggtcg ccggcgccac cggcaccggg aagaccgtct
      961 cgttgatggt gctggcggaa ggcttcagcc gactgggtgt cccggtgttc atggccgacg
     1021 tcaaaggcga cgtggccggc ctcgccgtgg ccggcaccat cagcccgaaa ctcaccgagc
     1081 gggccgccgc catcggcctc gaggggtttg ctcccgaagc gagcccggtg gtcttctggg
     1141 atctgtacgg caaggtcggg catccgatcc gggcgacggt cagcgagatc ggcccgaccc
     1201 tgctgggccg catgctcgag ctcaacgacg tccagtcggg ggtgctcgag atcgccttca
     1261 cgctggccga cgaccagggc atgctcctgc tggatctgga cgacctgcgg tcgttgctcg
     1321 ggtttctggg ggacaaccgg aaagaggttt ccgcccaata cggtctgatc agcactcaat
     1381 cggtggcggc cgtccaacgc gccctgctgt cgctggagcg cgaaggcgga gaccagttct
     1441 tcggggaacc ggcgctggag ctggtggagc tgctgcgcac cgatgcgaac ggccggggca
     1501 tcgtcaatgt gctggcatcc gaccagctga tcctcaagcc gcggctgtac tcgagcttcc
     1561 tctggctcct gtcggagctg ttcgagaacc tgcccgaggt gggcgacctg gaccggccca
     1621 agctggtgtt ctgcttcgac gaggcccacc tgctgttcga cgatgcgccg ccggcgctgc
     1681 ggcagcgggt ggaacaggtg gtccgcctga tccgctccaa aggcgtgggc gtgtacttct
     1741 gttctcagct ccccgacgac gtgccgaacg agatcctggg ccagctcggc aaccggatcc
     1801 agcacgccct gcgcgccttc
//
LOCUS       DASWKS010000363         2423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2777120, whole genome shotgun sequence.
ACCESSION   DASWKS010000363 DASWKS010000000
VERSION     DASWKS010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2777120"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..1463)
                     /locus_tag="VGA78_10460"
     CDS             complement(138..1463)
                     /locus_tag="VGA78_10460"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9894337.1"
                     /translation="MIPARTLVLTVAALLVSAAAPLLAQDASREVADRILAVVGRTAI
                     LQSEVEERVYQGRQGRPLPTDPAEVAALNKQALEEMIDEELLYQMALTDTTVKVTDEE
                     VTAAVDEQIRNVRRRYPSDDSLRAGLRETGFFTIEEYRRWLTDTQRKQLLTSALVNQL
                     RGSGKLKPVIPTDRELRAAFEQERGRARRPETVSFRQIVVAPAPSAAARQRALVLADS
                     ILQELRKGADFATAARRFSADPGSKEQGGSLGWFRRGVMHKRFEDVAFGIRPGIVSDP
                     VETPFGFHLIQVERVQPSEISARHILIAPEILQQDADSAKATAEAIRAALMQGANADS
                     IARLWHDSQEERDFREFPSDKLLPVYTTGFQGVATGEYTPVLKLEFAADPIRSKFAVI
                     QIVDRKDAGEYRFEDVKDQLRRTLGERLAIRRYLDQLRQATYVDVRGSS"
     gene            complement(1460..>2423)
                     /locus_tag="VGA78_10465"
     CDS             complement(1460..>2423)
                     /locus_tag="VGA78_10465"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9894338.1"
                     /translation="IRRGGDFGAIAKNNADASKEDQGYLPVGGKGQFVPEFETVAWTL
                     EPGQVSDVVQTSFGLHLIRRPPREEARSRFLPFLERTNISRGDSTYINDLAKSKALKV
                     QPNASKHLKDAAANFDAARKNGQRLASFKGGALTVANFARWMEVMNAGSHRQLAQSPD
                     SLLDNFVEQLAQNTLVIRQMDSAGIQVPVANWQALQLAYRATMDQMAASMGLTDSAVV
                     DSTKPKAARLDSAASRINRFIDQLLTGQAQFRPLPPPLAGFLRENGRYKINRAGLTRA
                     VELATAKWKADSAAGGAAGQPGAIQPAPGGPPIPSGDSGATKQP"
BASE COUNT          370 a          802 c          820 g          431 t
ORIGIN      
        1 ggaagatctg gtccagcggg gaatcatgcc gccggagctg gtgcggaagg cggggttgaa
       61 ggtcttcgtt cagtaggtcc gtcggtcggt cggtcggtcg gtctcgtgac cgactgaccg
      121 actgcacgac tgaccaacta gctgctcccc ctcacatcga catacgtcgc ctgcctcagc
      181 tggtcgaggt agcgccggat ggccagccgc tcacccagag tgcgtcgcag ctgatccttc
      241 acatcctcga agcgatattc cccggcatcc ttgcggtcca cgatctggat cacggcgaac
      301 ttggagcgaa tgggatccgc ggcgaactcg agtttgagga ccggggtgta ctctccggtt
      361 gcgacgccct ggaacccagt ggtgtagacc ggcagcagct tgtccgaggg gaactcccgg
      421 aagtcccgct cttcctgcga atcgtgccac agtcgtgcaa tggaatcggc attggctccc
      481 tgcatcagcg cggcgcggat tgcctccgcg gtcgccttgg ctgaatcggc gtcttgctgg
      541 aggatctcgg gggcgatgag gatgtgtcga gccgagatct ccgacggctg gacccgttcc
      601 acctggatca gatggaagcc gaagggggtc tccaccggat ccgacacgat gccggggcgg
      661 atgccgaagg ccacgtcttc gaagcgtttg tgcatgacgc cccggcggaa ccaccccaac
      721 gatccgccct gctccttgga gccgggatcg gccgagaagc gccgggccgc cgtggcgaag
      781 tcggcccctt tgcgcagctc ctggagaatg gagtccgcca gcaccagcgc ccgctgccgc
      841 gccgccgccg acggggccgg cgcgaccacg atctgccgga acgagacggt ctccggccgg
      901 cgggcccgcc cccgctcctg ctcgaacgcg gcccggagct cgcggtcggt gggaatgacc
      961 ggcttgagct tgccgctccc ccgcaactgg ttcaccaagg cgctggtgag cagctgcttg
     1021 cgctgggtat cggtgagcca gcggcgatac tcctcgatgg tgaagaaccc cgtttcccgg
     1081 agccccgccc gcaacgagtc gtcgctggga tagcggcgcc gcacattgcg gatctgttcg
     1141 tccaccgccg cggtgacttc ctcatcggtc actttcaccg tcgtatcggt gagggccatc
     1201 tggtagagca gctcctcatc gatcatctct tccagggcct gcttgttgag cgcggccact
     1261 tcggccggat cggtcgggag gggccggccc tgccggccct gatagacccg ctcctcgacc
     1321 tcggactgga ggatcgcggt gcggcctacg accgcaagga tccgatcggc cacttcacgg
     1381 ctggcgtcct gggccagaag cggcgcagcc gcgctcacga ggagcgcggc cacggtcaat
     1441 accagggtgc gtgccggaat catggctgct tggtagcgcc cgagtcaccg ctcgggatcg
     1501 gtggtccacc gggcgcaggc tggatggcgc cgggctggcc ggccgcacca ccagccgccg
     1561 agtccgcctt ccatttggcg gtggccagtt cgacggcccg ggtgagaccg gcccggttga
     1621 tcttgtagcg cccgttctcc cgcaggaatc ccgcgagcgg aggcggcagc ggccggaatt
     1681 gggcctggcc ggtgagcagt tgatcgatga accggttgat ccgcgacgcc gccgagtcca
     1741 gccgggccgc tttgggtttg gtgctgtcca ccacggcgga atcggtgagc cccatcgagg
     1801 ccgccatctg gtccatggtg gcgcggtagg ccagctgaag ggcctgccag ttggcgaccg
     1861 gaacctggat gccggccgag tccatctgcc ggatcacgag cgtgttctgc gccagctgct
     1921 ccacgaagtt gtctagcaac gaatcgggcg actgggccag ctgccggtgg gagcccgcat
     1981 tcatcacttc catccagcgc gcgaaattgg ccaccgtcaa ggcgccgcct ttgaagctcg
     2041 ccagccgctg cccgttcttg cgggccgcgt cgaaattcgc cgccgcgtcc ttcaggtgct
     2101 tgctggcgtt gggctgcacc ttgagagctt tggacttggc cagatcgttg atgtaggtgg
     2161 agtcaccccg ggaaatgttg gtgcgctcca gaaaggggag gaaccgggag cgggcttcct
     2221 cccgcggggg gcggcggatc aggtgcaatc caaacgaagt ctgcaccaca tcgctcacct
     2281 gccccggctc cagggtccag gccacggttt cgaactcggg gacgaactgg cccttcccgc
     2341 ccaccggcag gtagccctgg tcttccttgc tggcgtcggc attgttcttg gcgatggcgc
     2401 cgaagtcgcc tccccgccgg atc
//
LOCUS       DASWKS010000364         2796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1288648, whole genome shotgun sequence.
ACCESSION   DASWKS010000364 DASWKS010000000
VERSION     DASWKS010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1288648"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(306..1583)
                     /locus_tag="VGA78_10470"
     CDS             complement(306..1583)
                     /locus_tag="VGA78_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894339.1"
                     /translation="MVGSRRNAQLLAALFAGVLAGCNVPFRGGDIEPPASVPLGTPAA
                     TTAAAAPTVGLPTELPGSTAEPFDEGIAHFEPEQLVLITAIHMVSPSVGWGIGGLEGA
                     QDHVLRTQDGGTTWQDLTPPESDPEAGEVDKAAVGIFLDAEVVRVVYYPASLTPEPTV
                     ATVWASEDGGASWTASQPISLDFLGSTDFPPVLRFVDADNGWLLAQQGAAGMHRYPVY
                     LLRTSDGGRTWNTAIDPFEGAGLQSCNKTGLFFLDAQTGWVTVDNCPVTAPELSVTAD
                     GGLTWEAHPLPAPANRLTLFDDALCEAHSPQLLTPAIGFVGVSCRSGLNIEYVYVTQD
                     GGLTWEPHLNQGGSLVMLSPRVGFALSRRIYQTLDGGVTWTAMKVVDWDGQFSWLDDR
                     TGWAVARNDGALALVKTTNGGRVWDLLKPIIGP"
     gene            complement(1712..2290)
                     /gene="msrA"
                     /locus_tag="VGA78_10475"
     CDS             complement(1712..2290)
                     /gene="msrA"
                     /locus_tag="VGA78_10475"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX9894340.1"
                     /translation="MRDTDRSSLEMDQATELATLGGGCFWCLEPVFDELVGVQQVEVG
                     YAGGEMASPSYEQVCGGRTGHAEVVQIRFDPRQISYRDLLEIFFSIHDPTTPDRQGAD
                     VGPQYRSLVLSHSAEQRKIAEDLAAELRADGIPVVTQLEPFQAFYRAEEYHQAYYRKN
                     PSAGYCRVVVAPKLAKFRAKYTSRLRAAAQKA"
     gene            complement(2320..>2796)
                     /locus_tag="VGA78_10480"
     CDS             complement(2320..>2796)
                     /locus_tag="VGA78_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894341.1"
                     /translation="LERAEADLRRALFYRPDDLVPLFNLALTLARQGPQHLAEALELL
                     EQAEQADPDSAGVQNALCWFLGLSGSPEQALPHCDQAVALDESGNSNDSRGLALALLG
                     RPQEAAVEFETFLASLEVNNPAAHAQYAPSRREWVAALKRGEDPFDEATLEKLLQE"
BASE COUNT          451 a          946 c          922 g          477 t
ORIGIN      
        1 atcgatcgga ccgccctcac gtctttcttc tggcggcgga cgaggccctt gagcgcggcg
       61 accagcccgg ccgagcgctc ggagacccga tacgtcttgg agagttcctt gacctcgatg
      121 gccaattcca tcgtcccact caccatggca aggcaccggc ctcaggattc ggttccggcg
      181 ccttacgcaa aatcgacctg ctccctcacc gggagaggtc gtttctcggg gcgcagaagt
      241 ataacgcaga tcgagcggag gccggcgtcc gcagggcggc tgtgctgcgg tctgaaagcg
      301 gccggctacg ggccgatgat cggcttgagc aggtcccaga cccggccccc gttggtggtc
      361 ttcaccaggg ccagtgctcc gtcattgcgc gccacggccc agccggttcg gtcatccagc
      421 cagctgaact ggccgtccca gtcgaccacc ttcatggcgg tccaggtcac gccgccgtcc
      481 agggtctggt agatccggcg gctcagtgcg aagcccaccc gcgggctgag catgaccaac
      541 gagccgcctt ggtttagatg cggctcccag gtgaggccgc cgtcctgggt gacgtacacg
      601 tattcgatgt tgaggcccga ccgacaactc acccccacga acccgatggc gggcgtcagc
      661 agctgtggcg agtgggcctc gcaaagtgcg tcgtcgaaca gggtcaggcg attggccggg
      721 gcaggcagcg gatgagcttc ccaggtcagc ccgccgtcgg cggtgaccga gagctccggc
      781 gcggtgaccg ggcagttgtc taccgtgacc cagccggttt gtgcgtcgag gaagaacaga
      841 ccggtcttgt tgcagctctg cagtccggca ccttcgaagg gatcgatggc cgtattccag
      901 gtccgcccac catcgctggt gcgcagcaag tacaccgggt agcggtgcat tccggccgcg
      961 ccctgttgag ccaacagcca tccgttatcg gcgtccacaa aacgcagcac cggcgggaaa
     1021 tccgtggatc ccaggaagtc tagcgagatg ggctggctgg ctgtccagga ggctccgccg
     1081 tcttccgaag cccacactgt ggcgacagtc ggctcggggg tgagcgaggc cgggtagtag
     1141 accacccgaa ccacttccgc atccaggaag atgcccaccg ccgccttgtc gacctcgccg
     1201 gcctccgggt ccgactcagg gggcgtgaga tcctgccagg tggtgccccc gtcctgcgtg
     1261 cgcaacacgt ggtcctgcgc accctccaac ccgccgatcc cccagcctac gctcgggctg
     1321 accatgtgga tggccgtgat caggaccaat tgctccggct cgaaatgggc gatgccctcg
     1381 tcgaacggct cggcggtcga tccagggagc tcggtcggca gcccgaccgt cggggcggcc
     1441 gccgcggtgg tggcggctgg agtgcccagg ggtacggagg caggcggttc tatatcgccc
     1501 ccgcggaatg ggacgttgca gcctgccagg acgcctgcga acagcgcggc aaggagttgc
     1561 gcgtttcttc ggctgccgac catggggcac cgcctttcca cgcccggagt ctagtggaaa
     1621 cggcgccttt gtgacaggga aaggggtact tgtagcggag atcctcgggg ccggcccgac
     1681 cgcggggccg ccggcgaggc ccgcctctgt ctcaggcttt ctgggccgcg gctctcagcc
     1741 gggaggtgta cttggcgcgg aacttggcca gcttgggcgc caccaccact cggcagtacc
     1801 cggcgctggg gttcttgcgg tagtaggcct ggtggtattc ctccgcccgg tagaacgcct
     1861 ggaagggttc cagctgggtg acgaccggaa tcccgtcggc tcgcagctcg gccgccaggt
     1921 cctcggcgat cttccgctgc tccgcactgt gagagaggac cagcgaacga tactgcggcc
     1981 ccacgtcggc gccctggcga tcgggggtcg tgggatcgtg aatggagaag aagatctcca
     2041 gcagatcgcg ataggagatc tgccgggggt cgaagcggat ctggaccact tcggcgtggc
     2101 cggttcggcc gccgcacact tgctcatagg agggactggc catctcccct ccggcgtatc
     2161 ccacctccac ctgctgtacc ccgaccaact catcgaacac gggctccagg caccagaagc
     2221 atccaccccc cagggtggct aactcggtgg cctgatccat ctcaagggac gaacgatctg
     2281 tgtcgcgcat taccggcacc tcctttggct atctcaccgt tactcctgca gcaatttctc
     2341 cagggtggct tcatcaaacg ggtcctcacc gcgcttcagt gccgccaccc attcccggcg
     2401 tgaaggtgcg tattgggcgt gggccgccgg gttgttgacc tccagactcg ccaggaaggt
     2461 ctcgaactcc accgccgcct cctgcggtcg accaagcagc gccaacgcca ggccgcggct
     2521 gtcgttgctg ttcccggact cgtccagggc gacggcctgg tcgcagtgcg gcagcgcctg
     2581 ctccggcgat ccgctcaggc cgaggaacca gcacagagcg ttttgcacgc ccgccgagtc
     2641 tgggtcagcc tgttccgcct gctccagcag ctccagcgct tcggccaggt gctgcggccc
     2701 ctgccgggca agcgtcaggg ccaggttgaa cagagggacg agatcatccg ggcgatagaa
     2761 cagcgcccgg cgcaggtccg cctccgcccg ttccag
//
LOCUS       DASWKS010000365         6839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3498442, whole genome shotgun sequence.
ACCESSION   DASWKS010000365 DASWKS010000000
VERSION     DASWKS010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3498442"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2402
                     /gene="metH"
                     /locus_tag="VGA78_10485"
     CDS             <1..2402
                     /gene="metH"
                     /locus_tag="VGA78_10485"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX9894342.1"
                     /translation="LVDSSKWSVIEAGLRCIQGKGVVNSISLKEGEAEFVHHARLVRR
                     YGAAVVIMAFDEQGQGDTAERRVAICQRAYRILTDQVGFSPEDIIFDPNIFAIGTGIE
                     EHSNYAVEYMEAVRRIKAQLPHVLISGGVSNVSFAFRGNDRVREAMHTVFLYHAIQSG
                     MDMGIVNAGQLAVYDDIDPELRQLVEDVVLNRRADATERLLAAAAHWAGGRTDGRTGG
                     DLRWRELPVEERLSHSLVEGIDTYIVEDTEAARAALGRPLAVIEGPLMRGMNIVGDLF
                     GAGKMFLPQVVKSARVMKKAVAYLVPYLEAEKAQRGGSARQPRILMATVKGDVHDIGK
                     NIVGVVLQCNNFEVVDLGVMVPAATILATAREKEVDLVGLSGLITPSLDEMVFVAGEL
                     ERSGFRTPLLIGGATTSKVHTAVRISPRYSAPVIHVLDASRAVGVASALLSPDQREGF
                     AGQIRGEYEAIRIEREGRSREEQLLPWDAARAHRPAIGWNGAPPPVPFLEGIRSFDDY
                     PLEQLVERIDWTPFFQTWEMRGHYPEILTDPETGPAATALFRDATALLERIVRERLLA
                     ARGVVGFFPANSVGEDIELYTGADRRTTLAVVHTLRQQMAKSGDRSNLALADFVAPRD
                     TGLPDHLGMFAVTTGHGVARLVADFERAHDDYNAILTKALADRLAEAFAERLHQLVRT
                     ELWGYARDESLGNAGLIREEYQGIRPAPGYPACPDHTEKATIFRLLDATARAGIALTE
                     SYAMTPAASVSGYYFWHPEARYFGVGRIGRDQVADYARRKGMDISVVERWLSPNLAYE
                     R"
     gene            2515..4341
                     /locus_tag="VGA78_10490"
     CDS             2515..4341
                     /locus_tag="VGA78_10490"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HEX9894343.1"
                     /translation="MPTFRELIDDGRVHVVDGAMGTMLYARGAFLNVCYDELVLKQPG
                     LIRDIHRAYVKAGAEVLETNTFGANPRKLAQFGLAQDTEKINRAAAELAREAAGDRAA
                     VLGAIGPLGVRIEPFGETSVAEAQASFEQQVRGLLEGGVDGFVLETFSDQNELAAAIR
                     AVRALSPLPIAAQMTIGPDGRTAYGTEPASFGPALEALGADVIGVNCSVGPQGVLEAV
                     EQLAQVVKRPLSAQPNAGLPRDVGDRKIYMASPEYMASYARRMVEAGARFVGGCCGTT
                     PEHIKAIAGFVQSVTPRHHPVAPTGEQKAQGVEPVPLAERSRYGAKLALGQFITTVEI
                     VPPKGSDPTPMFDQCRALKAAGVDAVNVPDGPRAQSRMGALISAILIEREVGLEAVTH
                     YCCRDRNLLGMLSDLLGAAAAGLRNLLVVTGDPPKMGPYPDATAVFDIDSIGLTNLVA
                     RLNRGLDPGGNPLGQPTRFTIGVGVNPAAPDLEREISRFAWKVDAGAEFAITQPVFDL
                     DQLDRFLKRVEAFRLPIIGGIWPLVSLRNAEFLANEVPGVRVPQEILDRMRRASELGK
                     EAALAQGVGIAREMLAAVRDRLAGAQVSAPLGRVPVALDVLS"
     gene            4602..6197
                     /locus_tag="VGA78_10495"
     CDS             4602..6197
                     /locus_tag="VGA78_10495"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEX9894344.1"
                     /translation="MRYGSTLLTAALLGLVACTEPAPPSGPTEQSPAPLLAAGADTQA
                     SARYIVVFKSGSAVADDFPDELVRTYGGSVHFRYSAAIQGFAATLPPAAVEAVRRNPI
                     VEFVEADGVAYAIGSQPLPSSNQQWGLDRIDERDLPLDLTYLYQNDGSGVEAFILDTG
                     IRYTHEQFGGRAVSGPDFVSGDSFSEDCHGHGTHVAGTVGGTTTGVAKNVTLFGVRVL
                     GCGGSGSYSGIIAAIDWVTQRKQANPGVGMVGNMSLSGGASSSVNTAVNNSVAAGVVW
                     AVAAGNDYGGDACGRSPASAASALTTGATTITDARASFSNIGPCVDIFAPGNAIYSST
                     FNGDNTYGSWAGTSMASPHVAGVAALYLASNPSATGSQVNAVIVDNATLDKVTNPGAG
                     SPNRLLYNQIAGATPPPPPPPPPPPPPPPPPPPATLVHVHELTGSGTQNGKKNWRATV
                     QALVTDAGGTGVGGATVSGSFTTGGSGSCITAGNGRCSITSSLISVSNLTTTFNVSGV
                     TGTGLSYDPSNPANVTSRTITRP"
     gene            6328..>6839
                     /locus_tag="VGA78_10500"
     CDS             6328..>6839
                     /locus_tag="VGA78_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9894345.1"
                     /translation="MSTASVAPLPLSTLSEEEAMFREAVRDFAESEIRPHVTEMDEAG
                     HFRPELIAKFFEMGLMGIEIPELYGGAGSSIFMAGLAIEELARVDASAAIYVDVQNTL
                     CNNALLRWASDEQKQRYLPRMCTDLLGAFALSEPASGSDAFGLQTRADLKAGHWELTG
                     RKLWITNGAEA"
BASE COUNT         1111 a         2300 c         2352 g         1076 t
ORIGIN      
        1 tgctggtgga ctcctcgaag tggtcggtca tcgaggccgg gctccgctgc atacagggca
       61 agggcgtggt caactcgatc agcctgaagg agggcgaagc cgagttcgtg caccacgctc
      121 ggctggtccg gcgctacggc gccgcggtcg tgatcatggc gttcgacgaa cagggccagg
      181 gcgacacggc ggaacgccgg gtggcgatct gccagcgggc ctatcggatc ctgaccgacc
      241 aggtggggtt ctcccctgaa gacatcatct tcgaccccaa catcttcgcg atcggcaccg
      301 gcatcgagga gcactccaac tacgccgtcg agtacatgga agcggtgcgc cggatcaagg
      361 cccagctccc ccacgtgctg atcagcggcg gcgtgagcaa tgtgtccttc gcgttccggg
      421 gcaacgaccg ggttcgcgag gcgatgcaca ccgtcttcct ctaccacgcc atccagtccg
      481 gcatggacat gggaatcgtg aacgccggcc agctggcggt ctacgacgat atcgatccgg
      541 agctgcggca gctggtcgag gacgtcgtgc tcaaccgccg ggcggatgcc accgaacgtc
      601 tcctggcagc ggcggcacat tgggcgggcg gacggacgga cggacggaca ggcggcgatc
      661 tgagatggcg ggaactgccg gtcgaggaac ggctgtccca ctcgctggtc gaggggatcg
      721 acacctacat cgtcgaggac accgaagcgg cccgggccgc cctggggcgg ccgctggccg
      781 tgatcgaggg tccgctgatg cgggggatga acatcgtcgg cgacttgttc ggcgccggca
      841 agatgtttct gccgcaggtc gtgaagagcg cccgggtgat gaagaaggcg gtggcctacc
      901 tggtgcccta tctcgaggcg gagaaggccc agcggggcgg gagcgcacgg caaccccgca
      961 ttctgatggc gacggtcaag ggcgacgtgc acgacatcgg caagaacatc gtgggcgtgg
     1021 tcctgcagtg caacaacttc gaggtggtgg acctgggcgt gatggtgccc gcggccacca
     1081 tcctggcgac ggcgcgggag aaggaggtcg acctggtggg actgtcgggg ctgatcaccc
     1141 cgtcgctgga tgagatggtc ttcgtagccg gcgagctgga gcgctccggg ttccggactc
     1201 cgctgctgat cggcggagcc accacgtcca aggtccacac cgcggtgcgg atctcgcccc
     1261 ggtattccgc ccccgtcatt cacgtgctgg atgcgtcccg ggcggtgggg gtggcgtccg
     1321 ccctgttgag cccggaccag cgggaaggat tcgccggcca gatccggggc gagtacgagg
     1381 ccatccggat cgaacgggag ggtcgcagcc gggaggaaca gctgctcccg tgggacgcgg
     1441 cccgggccca ccggcccgcg atcgggtgga acggcgcgcc gcctcccgtg ccgtttctcg
     1501 agggcatccg gtcgttcgac gactatcccc tggagcagct ggtggaacgg atcgactgga
     1561 cgcccttctt tcagacctgg gagatgcggg gacactaccc cgaaatcctc accgacccgg
     1621 agaccggccc cgcggccacc gcgctgttcc gcgacgcgac ggccctgctc gagcggatcg
     1681 tgcgcgagcg gctgctggcc gcccggggcg tggtgggatt cttcccggcc aacagcgtgg
     1741 gggaggacat cgagctgtac accggcgccg accggaggac caccctcgcc gtggtgcata
     1801 cgctgcggca gcagatggcc aagtcggggg atcggtcgaa cctggcgctg gccgatttcg
     1861 tggctccgcg cgacaccggc ctgcccgacc acctgggcat gttcgccgtg acgacgggtc
     1921 acggggtcgc ccggctggtg gcggacttcg agcgggccca cgacgattac aacgccatcc
     1981 tcaccaaggc gctggccgac cggctggccg aagccttcgc ggaacgactc catcagctgg
     2041 tccggaccga gctctggggg tacgcccgcg atgaatcgtt gggcaacgcg gggttgatcc
     2101 gggaggagta ccagggaatc cgtcccgcgc cgggataccc ggcctgtccc gaccacaccg
     2161 agaaggccac catcttccgg ctgctcgacg ccaccgcccg cgccggcatc gcgctcaccg
     2221 agagctacgc catgacaccg gcggcttcgg tcagcggcta ctacttctgg catcccgagg
     2281 cccgctattt cggcgtgggc cggatcgggc gcgaccaggt ggccgactac gcccgacgca
     2341 aggggatgga catcagcgtg gtggagcggt ggctatcgcc gaacctggca tatgaacggt
     2401 aggtcgtttc agtcggtcgg tcgggccgtc ggtccgtcgg tcgctcaact gtgggtgacg
     2461 aattgtccga ccgtccgacc gtccgaccga ccgaccgact gaccgactga caagatgccc
     2521 accttccgcg agctgatcga cgacggccgg gtccatgtgg tggatggcgc catgggcacc
     2581 atgctctacg cccggggcgc gttcctcaac gtttgctatg acgagctggt gctcaagcag
     2641 ccgggcctga tccgtgacat ccatcgggcc tacgtcaagg ccggcgccga ggtgctcgag
     2701 accaacacct tcggggccaa tccccggaag ctggcccagt tcgggctggc gcaggacacc
     2761 gaaaagatca accgggccgc ggccgagctg gctcgcgagg ccgccggcga ccgggccgcg
     2821 gtgctgggcg ccatcggacc gttaggcgtc cggatcgagc ccttcgggga aaccagcgtg
     2881 gccgaagccc aggccagctt cgagcaacag gtgcgcggcc tgctcgaagg cggggtggac
     2941 ggcttcgtgc tggagacctt cagcgaccag aacgagctgg ccgccgccat tcgggcggtg
     3001 cgggccctgt cccccctccc gatcgcggcc cagatgacca tcgggcccga cggccgcacc
     3061 gcctacggca ccgagcccgc gagcttcggg cccgcgctcg aagcgctggg tgcggacgtg
     3121 atcggcgtga actgctcggt ggggccgcag ggggtgctgg aggcggtcga gcagctggcg
     3181 caggtcgtga agcggcccct gtcggcgcag cccaatgccg gactgccgcg cgacgtgggt
     3241 gatcgcaaga tctacatggc gtcgcccgag tacatggcga gctacgcccg ccgcatggtc
     3301 gaggccgggg cccggttcgt cgggggctgc tgcggcacca cgccggagca catcaaggcg
     3361 atcgccgggt tcgtccagtc ggtgacgccc cgccaccacc cggtggcccc taccggcgag
     3421 cagaaggcgc agggagtgga gcccgtgccg ctggcggaac gatcgcgcta cggcgccaag
     3481 ctggccctgg gccagttcat caccaccgtc gagatcgtgc cgcccaaagg gagcgatccc
     3541 accccgatgt tcgaccagtg tcgcgccctc aaggccgctg gggtggacgc cgtcaacgtg
     3601 cccgatggac cgcgagccca gagccggatg ggggcgctca tctccgccat cctcatcgag
     3661 cgggaagtgg gactcgaggc ggtgacccac tactgctgcc gggaccgcaa cctgctcggc
     3721 atgctctccg atttgttagg cgccgcggcc gccggcctgc gcaatctgct ggtcgtgacc
     3781 ggcgatccac ccaagatggg accctacccc gacgccaccg ccgtgttcga catcgacagc
     3841 atcgggctca ccaatctggt ggcgcgactc aaccgcggac tcgatcccgg cggcaatccc
     3901 ctgggccagc cgacccgatt cacgatcggg gtcggggtga atcccgctgc gcccgatctg
     3961 gaacgggaga tctcccgctt cgcctggaag gtggacgccg gcgccgagtt cgccatcacc
     4021 caaccggtct tcgacctcga ccagctggac cgtttcctca agcgggtgga agccttccgg
     4081 ttgccgatca tcggaggcat ctggcccctg gtctcgctcc gcaacgcgga gtttctcgcc
     4141 aacgaggtcc cgggcgtcag ggtgccgcag gagatcctcg accggatgcg gcgcgccagt
     4201 gagttgggca aggaggcggc cctggcccag ggagtcggga tcgcgcgcga gatgctggcg
     4261 gcggtgcgcg accggctcgc gggggcccag gtgtcggcgc cgctgggccg ggtcccggtg
     4321 gcgttggacg tgttgtcgta agctggtgac ttcagctggt gacttcatgc taatccgatt
     4381 gcgctgagtg ctcggttttt gcaggttgat ttcttccgct aaccccaagt cctgaagccg
     4441 aattgcgtat cctgtcgcgc gaggcgcggt tagcgcttcg ccggatgctc ggcgccgata
     4501 cccctgtctc acggcgctgc ggtgatccac cgtgtcttca tcgcgacaga tcgtgaaaga
     4561 ggtgcggctt ccgcgcagca acaacgtggt aaggaggctt cgtgcgttac ggttcaaccc
     4621 tgctcactgc ggccctgctc ggcctggtgg cctgcaccga gccggccccc ccgtcggggc
     4681 cgacagagca gtctcccgcg ccgttattgg cggccggcgc tgacactcag gccagcgctc
     4741 gctatatcgt ggtcttcaag tccgggtcgg ccgtcgccga cgatttccct gatgaactgg
     4801 tcaggaccta cggcgggtcg gtgcacttcc gttacagcgc ggcgatccag ggcttcgccg
     4861 cgaccctgcc cccggcggcc gtcgaggctg tccggcggaa ccccatcgtc gagtttgtgg
     4921 aagccgacgg agtggcgtac gcgatcgggt cgcagccgct gccctcgagc aatcagcagt
     4981 ggggactgga ccggatcgac gaacgggatc tgccgctgga tctgacctac ctctatcaga
     5041 acgacggcag cggagtcgag gccttcattc tcgacaccgg catccgctac acccacgagc
     5101 agttcggcgg gcgggccgtg agcggacccg acttcgtgag cggggacagc ttctcggagg
     5161 attgtcacgg ccacggaact cacgtcgcgg gcacggtagg cggtaccacc acgggtgttg
     5221 cgaagaacgt gaccctcttc ggggtacggg tgctgggctg cggcggaagc ggcagctact
     5281 ccggcatcat cgccgccatc gactgggtga cccagcggaa gcaggccaac cccggcgtcg
     5341 gtatggtcgg caacatgtcg ttgagcggcg gggcctccag ctccgtcaat accgcggtaa
     5401 acaactcggt cgcggccggc gtggtctggg ccgtggccgc gggcaacgat tacggcggcg
     5461 acgcgtgtgg tcgctcgccc gccagcgccg cctccgcgct gacgaccgga gccaccacta
     5521 tcaccgatgc ccgggccagc ttctccaaca tcggcccctg cgtggacatc ttcgcgcccg
     5581 gcaacgccat ctactcttcg accttcaacg gcgacaacac ctacggctcg tgggccggta
     5641 cctcgatggc gagtccccac gtggccggag tagcggcgct ctacctggcg agcaatccca
     5701 gcgcaacggg gagccaggtg aatgcggtca tcgtcgacaa cgcgacattg gacaaggtca
     5761 ccaaccccgg ggccggctca cccaaccggt tgctctacaa ccagatcgcg ggcgccacgc
     5821 ccccgcctcc gccgccaccg ccgccgccac ccccacctcc cccgccgccc ccgccggcga
     5881 ccctggtcca cgtgcatgag ctcaccgggt cgggcacgca gaatggcaag aagaactgga
     5941 gggccacggt tcaggcgctg gtgaccgacg ccggcggcac cggggtcgga ggagccactg
     6001 tcagcgggtc gttcacgacc ggtggctcgg gctcgtgcat cacggccggc aacggacgct
     6061 gcagcatcac cagcagcctc atcagcgtct cgaacctgac gacgaccttt aatgtgagtg
     6121 gggtgaccgg gaccgggttg tcttacgacc cgtcgaaccc ggcgaatgtc acctcacgga
     6181 ccatcacccg gccctgaccg ggtcgggcat tgcggcaagc ccggacgggg tccccagtac
     6241 ggggcccccg tttggctttc gcgaccttgc ccaagcccct aactttcaat cagttcggca
     6301 gtttcaggca actcaaccgg agtgttcatg tcgacggcca gcgttgcccc gctacccctt
     6361 tcaaccctct ccgaagagga agcgatgttc cgcgaggccg tgcgggactt cgccgagtcg
     6421 gaaatccggc cacatgtgac cgaaatggac gaggctggtc atttccggcc cgagctcatc
     6481 gcaaagttct tcgaaatggg gttgatgggt atcgagattc cggagctcta cgggggggcg
     6541 ggaagcagca tcttcatggc cggcctcgcc atcgaggagc tagcccgggt ggacgcctcc
     6601 gcggcgatct acgtggacgt ccagaacact ctttgtaaca acgccctgct ccggtgggcc
     6661 tccgacgagc agaagcagcg ctacctgcct cggatgtgca ccgacttgct gggggctttc
     6721 gccctgtccg aaccggccag cggcagcgat gccttcgggc tccagacgag ggccgacctc
     6781 aaagccggtc actgggagct caccggacgg aagctctgga tcaccaacgg ggccgaggc
//
LOCUS       DASWKS010000366         2800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2778771, whole genome shotgun sequence.
ACCESSION   DASWKS010000366 DASWKS010000000
VERSION     DASWKS010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2778771"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /locus_tag="VGA78_10505"
     CDS             <1..1185
                     /locus_tag="VGA78_10505"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894346.1"
                     /translation="LHLGALGPRRVRMDDEGWMPAAPYRLVDNEQTWLEFTDLVFIDP
                     VGTGFSRAVTQELGRKFWSFRGDLESVGQFIRLYLSRHERWSSPLFLVGESYGTTRAA
                     GLSRWLVDHGIGLNGVVLVSTILNFQTARFGSGNDLPYALFVPLYTATAWYHQRLEKE
                     LQADLRRTLSQAERWVDTDYTLALQKGDGLTPEERRRTAEQLARFTGLSREFLERYNL
                     RISLNVFQKELLRDQGRTVGRLDSRFTGWDAVAGGDNPEFDPSMTAIRPPYTATFNDY
                     VRRELGFKSDLEYYILGGGIGPWTYETDNAFADIGEQLRGAWARNPHMRLFVAFGYYD
                     GATPYYAADYTIRHMRLMPEQKTRISTGHYEAGHMMYIHVPSLVRLTDDVRRFVTGGA
                     AR"
     gene            complement(1207..>2800)
                     /locus_tag="VGA78_10510"
     CDS             complement(1207..>2800)
                     /locus_tag="VGA78_10510"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9894347.1"
                     /translation="ATWLLGVAGVVLLIACANVANLVLARGYRRRGEIAVRLALGVPR
                     SRLLRMLLAESLVLALGGALLGLVLTRWGGALLRATLLPGLAWGGSMDRRVLAITAGV
                     TILVALIAGLLPLLRASRTDVAAVLHGAARQVGGAPLRLRAGLLLVQTTLCTALLVGA
                     GLFLTSLDRVMGLDLGVRLDRALLVSVDLGAIEVPADQQLVFYREAERRLAAIPGVAA
                     AGAIQCAPFLCNMGGGIRVPGLDSVPRQPGGGPYFFRVTPGALEAFGVRLIGGRLFTQ
                     SDRAGSQPVAIVTQRMARLIWPNQDPLGKCFYAGTDDTVCREVVGVVADIHRQAIIEA
                     PFMLYFTVLEQWPDPVPPGNMVVSAAQGSPERLSEAVRRELQSLRADLPYIRARPYEE
                     VVSPHLRSWRLGATMFTLFAGLSLVIAAVGLYGVLSYLVTQRTAELGIRAALGASPGA
                     LLALVLRSGLFAAAAGVGLGLLLVLLVSGRLGELLFETSPREPLVLAAAALAVLGMAL
                     IASLVPGVRATRVDPMQALRAE"
BASE COUNT          514 a         1012 c          895 g          379 t
ORIGIN      
        1 ctccatctgg gagcactggg acctcggcgg gtccggatgg acgacgaggg ctggatgccg
       61 gccgcgccgt accggctggt cgacaacgaa cagacctggc tcgagtttac cgacctggtc
      121 ttcatcgatc cggtcggaac cggcttcagc cgggccgtca cccaggagct gggccgcaag
      181 ttctggagct ttcgggggga cctcgaatcc gtgggccagt tcatccggct ctacctgagc
      241 cgacacgaac gctggtcgtc gcccttgttc ctggtgggtg agagttacgg caccacccgc
      301 gccgccggcc tctcccgctg gctggtggat cacggcatcg ggctcaacgg cgtggtgctg
      361 gtgtccacca tcctgaattt ccagaccgcc cgtttcggct ccggcaacga cctgccttac
      421 gcgttgttcg tcccgctcta taccgccacc gcctggtatc accagcggct ggagaaagag
      481 ctccaggcgg acctgcgacg caccctgtcg caggcggagc gatgggtgga caccgactac
      541 accctggcgc tccagaaggg cgacgggctg acgccggagg agcgccgccg caccgccgag
      601 cagctggctc gcttcaccgg cctctcgcgg gaattcctcg agcgatacaa cctccggatc
      661 agcctgaacg tcttccagaa agagctgctg cgcgatcagg ggcggacggt cgggcggctg
      721 gattcacgat tcaccggctg ggacgcggtc gcgggggggg acaacccgga gttcgacccc
      781 agcatgaccg ccatccgccc gccttacacc gccaccttca atgactatgt acggcgcgag
      841 ctgggcttca agtccgatct ggagtattac atcctggggg gcgggatcgg gccgtggacc
      901 tacgaaaccg ataacgcctt cgcggatatc ggggagcagt tgcgcggtgc ctgggcccgc
      961 aacccgcaca tgcgtctctt cgtggcgttc ggatactacg atggggcgac cccgtattac
     1021 gccgcggact acaccatccg ccacatgcgg ctgatgccgg agcagaagac ccggatcagc
     1081 accgggcatt acgaggccgg ccacatgatg tacatccacg tgccgagcct ggtgcggctg
     1141 acggatgacg tgaggcgatt cgtgaccggc ggcgccgcgc gctagtcccg atctcgcccg
     1201 cgcgacttac tccgcccgca gcgcctgcat cgggtccacc cgcgtcgcgc gcaccccggg
     1261 caccaggctc gcgatcaggg ccatgcccag cacggccagc gccgctgccg ccagcaccag
     1321 cggctcccga ggtgaggtct cgaacaggag ttcccccagt cgcccgctga ccagcaggac
     1381 cagcagcagc cccagcccca cccccgcggc cgccgcgaac aggccgctcc gaagcaccag
     1441 cgccagcagc gcgccgggag aggcccccag ggccgcccga atgccgagct cggcggtgcg
     1501 ttgcgtcacc agatacgaca ggactccgta gagacccacc gccgcgatca ccaggctcaa
     1561 gccggcgaac agcgtgaaca tggtggcgcc gagtcgccat gaccgaaggt gaggcgagac
     1621 cacctcttcg tagggacggg ccctgatgta cggcagatcg gcccgcaggg attgcaactc
     1681 acggcgcacg gcctcggaca gacgttccgg cgatccctga gcggcactga ccaccatgtt
     1741 gccgggcggt accgggtcag gccactgctc cagcaccgtg aagtacagca tgaatggcgc
     1801 ttcgatgatc gcctgccggt gaatgtccgc caccaccccc accacttccc ggcacacggt
     1861 atcgtcagtc ccggcgtaga aacacttccc cagcgggtcc tgattgggcc agatcagccg
     1921 cgccatccgc tgggtgacga tagcgaccgg ttgactgccc gcccggtcgg attgggtgaa
     1981 gagccgtccc ccgatgagcc ggactccaaa tgcctcgagc gcaccgggtg tcacccggaa
     2041 aaagtagggg ccaccgcccg gctgtcgagg caccgagtcc aatccgggga cccggatacc
     2101 ccctcccatg ttgcagagga agggggcgca ctggatcgct cccgccgccg ccacaccggg
     2161 aatggccgcc agccgacgct cggcttcgcg atagaacacc agctgctgat cggctgggac
     2221 ctcgatcgcc cccagatcga ccgagaccag cagcgcgcgg tccaacctga cacccaggtc
     2281 cagccccatg acccgatcga gactggtgag gaagagcccg gcacccacca acagcgcggt
     2341 gcagagcgtg gtctgaacca gcaacaggcc ggcacgcagc cgcaacgggg ctccacccac
     2401 ctgccgggcc gcgccgtgca agaccgccgc cacatcggta cggctggcgc ggagcaacgg
     2461 gagcagcccc gcgatcaggg cgacgaggat ggtcacgccg gcggtgatgg ccagcaccct
     2521 ccggtccata ctaccacccc atgccaaacc gggaagcagc gtggcccgca gcagggcgcc
     2581 gccccagcgg gtcaggacca gacccagcaa agcaccgcct aacgccaaca cgagactttc
     2641 cgccaacaac atgcggagca gacggcttcg gggcactccc agcgccagcc gcacggcgat
     2701 ctcgccccgg cggcggtagc cgcgggccag caccagattg gcgacgttgg cgcaggcgat
     2761 caggagcacc accccggcga cccccaacag ccaagtcgcc
//
LOCUS       DASWKS010000367         5133 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1679970, whole genome shotgun sequence.
ACCESSION   DASWKS010000367 DASWKS010000000
VERSION     DASWKS010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679970"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..986
                     /locus_tag="VGA78_10515"
     CDS             <1..986
                     /locus_tag="VGA78_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEX9894348.1"
                     /translation="SKFKDPDVSYIVAATNAVRAAVRPGQAVILESTTYPGTTREVML
                     PALKSTGLTVGQDLFLAFSPERVDPGNVTWTTRNTPKVVGGITPECTRVVTALYQPAI
                     ERIVAVSSIETAELVKLLENTFRSVNIGLVNEMAIVCDKLGVDVWEVIDAAATKPFGF
                     MKFTPGPGVGGHCIPVDPHYLAWKMRGLNYKTRFIDLAGELNSEMPHFWVQKVAESLN
                     NDGRAVKGSQVLVLGVAYKKDIEDLRESPALDIIRLLEAQGARVSYHDPWVGRFTEDG
                     VERVSVPLTRQALQAADCVMVVTDHSAIDYGQVREHARMVVDTRNALRRNL"
     gene            990..2297
                     /locus_tag="VGA78_10520"
     CDS             990..2297
                     /locus_tag="VGA78_10520"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX9894349.1"
                     /translation="MRVTVVGGGYVGLVTAACLAETGNDVVCADVDAAKIARLESNEI
                     PIYEPGLDALVHQNQADGRLRFTTDIAGAIKHARVIIIAVGTPHEQDGNTDLSQVLAV
                     ACEIGRNLEHPAVVVTKSTVPVGTSDRVRAEIRRQTEVPFFMCSNPEFLKQGGAVEDF
                     MKPDRVVVGVDGSEAREAMEELYGPYVRTGNPILFMDIASAELTKYAANAMLAARISF
                     MNQVADLCERVGADVDLVRRGMATDRRIGPAFLFPGPGYGGSCFPKDVKALVATARRA
                     GMMAELFEAIESVNERQKRALLRKVVASLGEELDGFTIAVWGLAFKAGTDDMRESPAI
                     PLVEGLLQRGARVVAHDPKAAPNARHLFGDRIELVPDPYLALSGAEALVIVTEWLQYR
                     TPDFERIRELLRRPLVIDGRNLYEPERMQRYGLTYHCVGRSSS"
     gene            2294..3235
                     /locus_tag="VGA78_10525"
     CDS             2294..3235
                     /locus_tag="VGA78_10525"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEX9894350.1"
                     /translation="MRILISGAAGFLGSHLTDRFLADGAEVVGLDNFVTGSRANLAHL
                     AAEPRFTLLERDVVQPFDVAGPLDGVLHFASPASPVDYLRLPIETLLVGSIGTLRTLE
                     LARSKQARFLLASTSEVYGDPEEHPQRESYWGNVNPIGPRSVYDEAKRFGEALTMAFH
                     RSRGVDIRIARIFNTYGPRMRFQDGRVVSNFVGQALEQRPLTIYGDGEQTRSFCYVSD
                     LVDGLERLFRSSQAEPVNLGNPTEFTVRELAELVSRLIGGSAGVVSAPLPVDDPRQRR
                     PDITTARSVLGWEPKVPLEEGLQLTIQDFRSRLGAVA"
     gene            3250..3954
                     /locus_tag="VGA78_10530"
     CDS             3250..3954
                     /locus_tag="VGA78_10530"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894351.1"
                     /translation="MDVSVAHLLGQARERFANQDYYGAGHLLEEIIGSGRAFADVHHL
                     LGLCRSLLGQHERAIEEFDRALALNPRYIEAHIHRGIALSELGRTEAADAAFRQAAEN
                     DQPTETGFSRHVAAQLANQHAGLGEAYAEAGALSEAVTQYARAVELGPDFHDVRYRLA
                     RLLLERGNALEARVHLEQIVAANPEFVDARAALGLAHYMGGDPQAARLEWRAVLERRP
                     GHARATAYLSMLGRMA"
     gene            3951..4859
                     /locus_tag="VGA78_10535"
     CDS             3951..4859
                     /locus_tag="VGA78_10535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894352.1"
                     /translation="MTRFLGALLVLTAACGDAADHERLGDRHYREAQWVQALAEYQAA
                     SRDNGSGDVWGKMGAAALHAGNLQAALEAYAQLGAREASRVAEAARGLERVARAARRG
                     DSASAILTAAVVALRRLAPDRPLGRLARAAEAPGTADRMEELNLMPGAIAGANSSQDV
                     NRLLLSYGAALRATTACDRAVAIYRMAIRRAPGIESRKLAGEGLGACALQLGLDALAS
                     GRVAFAEQWFVEVTQADPASPVGLRARIGWGDARLKQGDLLGAAIVWQTVLSAAAVPD
                     SLRQMVQTRISELGSAGVPGDRDSGS"
     gene            4856..>5133
                     /locus_tag="VGA78_10540"
     CDS             4856..>5133
                     /locus_tag="VGA78_10540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894353.1"
                     /translation="MRMGILAGLGPVALTGCLFGGKPKPPPPVETVETTRVRADSLYA
                     AATGHFRIGKWGKAAQALDRALLIMGYDDPRRQLGHFMMGEVLMAQGN"
BASE COUNT          802 a         1645 c         1867 g          819 t
ORIGIN      
        1 tgtccaagtt caaggatccc gacgtcagct atatcgtcgc cgccaccaac gcggtgcgag
       61 cggcggtccg gccggggcag gcggtgatcc tggaaagcac cacctatccc ggcaccaccc
      121 gcgaggtcat gctacccgcc ctcaagagca cggggctcac ggtcgggcag gatctcttcc
      181 tggcgttcag ccccgagcgg gtggacccgg ggaatgtcac ctggaccacc cgcaacaccc
      241 ccaaagtcgt cggcggcatc acacccgagt gcacccgggt ggtgacggcg ctgtaccagc
      301 cggccatcga gcggatcgtg gccgtctcgt cgatcgagac cgccgagctg gtgaagctgt
      361 tggagaacac ctttcgcagc gtgaacatcg gcctggtgaa cgagatggcg atcgtctgcg
      421 acaagctggg agtggacgtg tgggaggtga tcgacgcggc cgcgactaag ccgttcgggt
      481 tcatgaaatt cacgcccggg ccaggcgtcg gcgggcactg catcccggtc gatccccact
      541 atctcgcgtg gaagatgcgg ggcctcaact acaagacccg ctttatcgat ctggcgggcg
      601 agctcaactc ggagatgccg cacttctggg tccagaaggt ggccgagtcg ctcaacaatg
      661 acggccgcgc ggtcaagggc tcccaggtgc tggtgctggg ggtcgcctac aagaaggaca
      721 tcgaggacct gcgggagagt cccgccctcg acatcatccg gctgctcgaa gcccaggggg
      781 cccgagtgtc gtaccatgac ccgtgggtcg gccgcttcac cgaggacgga gtggaacggg
      841 tctcggtgcc gctcacccgg caggcgctcc aggcggccga ctgcgtgatg gtagtcaccg
      901 atcattccgc tatcgactat ggccaggtgc gcgagcatgc ccgcatggtg gtcgataccc
      961 gcaacgcgct gcgccggaac ctctgagcca tgcgggtgac ggtggtgggc ggtggatacg
     1021 tcggcctggt gacggcggcc tgtttggccg agaccggcaa cgacgtggtc tgcgccgacg
     1081 tggacgccgc caagatcgcc cgactcgagt ccaacgagat cccgatctac gaaccggggt
     1141 tggacgcgct ggtgcaccag aatcaggcgg atggccggct ccggttcacc accgacatcg
     1201 cgggagcgat caagcacgcc cgggtgatca tcatcgcggt gggcacgccc cacgagcagg
     1261 acgggaacac ggacctctcc caggtgctgg cggtggcgtg tgagatcggt cgcaacctcg
     1321 aacatcctgc ggtggtcgtc accaaatcca cggtgccggt cgggacctcg gaccgggtgc
     1381 gggcggaaat ccgtcgccag accgaggtgc cgttcttcat gtgctccaac cccgagttcc
     1441 tcaaacaggg cggtgcggtc gaggacttca tgaagccgga ccgggtggtg gtcggggtcg
     1501 acgggtccga ggcgcgcgag gccatggaag agctgtacgg tccctatgtc cgcaccggga
     1561 atcccatcct gttcatggac atcgcgtcgg ccgagctgac caagtacgcg gccaacgcca
     1621 tgctggcggc gcggatctcg ttcatgaacc aggtggccga tctgtgtgag cgggtcggag
     1681 ccgacgtgga tctggtgcgg cgcggcatgg ccaccgaccg gcggatcggt cccgcgtttc
     1741 tgtttcccgg cccggggtac ggcggcagct gctttcccaa ggacgtgaag gccctggtgg
     1801 cgacggcccg ccgggccggc atgatggccg agctgtttga ggcgatcgag tcagtcaatg
     1861 aacggcagaa gcgggccctg cttcgcaagg tggtggcttc gctgggagaa gaactcgacg
     1921 gcttcaccat cgcggtctgg ggcctcgcct tcaaggcggg caccgatgat atgcgcgaga
     1981 gtccggcgat cccgctggtg gagggactgc tgcaacgcgg cgcgcgggtg gtggcgcacg
     2041 atcccaaggc ggcgcccaat gcccggcatc tgttcggcga ccggatcgag ctggtgcccg
     2101 acccctacct ggccctctcg ggcgctgagg ccctggtcat cgtgaccgaa tggctgcagt
     2161 accgcacccc ggatttcgag cggatcaggg agctgctgcg ccggcccctg gtgatcgacg
     2221 gacgcaattt gtatgaaccg gaacggatgc agcgctacgg cctcacctac cactgcgtgg
     2281 ggcggtcgag ctcgtgagaa tcctgatttc gggcgccgcc gggttcctgg ggtcccacct
     2341 gaccgaccgc ttcctggcgg acggggcgga ggtggtgggg ctcgacaact tcgtgaccgg
     2401 cagccgggcc aacctggctc acctggccgc tgagccgcgc ttcaccctgc tggagcggga
     2461 cgtggtgcaa cccttcgacg tggcgggccc gctcgacggg gtactgcact tcgcttcgcc
     2521 cgcgagcccg gtggactatc tcaggcttcc gatcgagacc ttgctggtgg gctcgatcgg
     2581 gaccctccgc accctggagc tggcccgttc caaacaggcc cgtttcctcc tggcctcgac
     2641 ctccgaggtg tacggcgacc ccgaggaaca cccccagcgc gagagctact gggggaatgt
     2701 gaatccaatc gggcctcgca gcgtctacga cgaggccaag cgtttcggcg aggctctgac
     2761 catggcgttc caccggagcc gcggcgtgga tatccggatc gcacggatct tcaacaccta
     2821 cgggccgcgg atgcggttcc aggacggccg ggtggtctcg aatttcgtgg gccaggcgct
     2881 ggagcagcgg cccctcacca tctatggtga cggcgagcag acccgttcgt tctgttatgt
     2941 gagcgatctg gtggatgggt tggagcggct attccggagc agtcaggccg aaccggtcaa
     3001 cctggggaac ccgaccgaat tcacggttcg ggagctggcc gagctggtga gtcggctgat
     3061 cggcggcagc gccggggtgg tgagcgcccc gctcccggtg gacgatcccc gccagcggcg
     3121 tcccgacatc accaccgccc ggtcggtgct gggctgggag cccaaggtgc cgctcgagga
     3181 aggacttcaa ctcactatcc aggactttcg gtcccggctc ggagcggtgg catgacggcg
     3241 ggaggcacga tggatgtcag cgtagcgcat ctcctgggtc aggcgcggga gcggttcgcc
     3301 aaccaggact actacggggc ggggcacctg ctggaggaaa tcatcggctc cggccgcgcc
     3361 ttcgccgacg tgcaccatct attggggctg tgccgctcgc tgctgggtca gcacgagcgg
     3421 gccatcgagg agttcgaccg cgcgctcgcc ctcaatcccc gctacatcga agcccacatt
     3481 catcggggca tcgcgctgtc ggagctgggg aggaccgaag ccgccgatgc cgcctttcgc
     3541 caggcggcgg agaacgacca gccgaccgag acgggcttct cgcgtcacgt ggcggctcaa
     3601 ctggcaaacc agcacgccgg cctgggggaa gcctacgccg aagccggcgc cctgagcgaa
     3661 gcggtgacgc agtatgcccg ggcggtggag ttgggacccg atttccacga cgtccgctac
     3721 cggttggcgc ggctgctgct cgagcggggc aacgcgctgg aggcgcgggt gcatctggag
     3781 cagatcgtcg cggccaatcc cgagttcgtc gatgcccggg ccgcgctggg gctggcgcat
     3841 tacatgggcg gcgatcctca agcggcccgg ctggagtggc gggcggtgct ggagcgccgt
     3901 cccggacacg ctcgggcaac ggcctatctt tccatgctgg gccggatggc gtgacccgct
     3961 tcctcggggc gctgctggtg ttgacggccg cctgtggcga cgccgccgat cacgagcggt
     4021 tgggcgatcg gcattatcgc gaggcccaat gggttcaggc cctggccgag tatcaggcgg
     4081 ccagccggga caacggatcg ggcgacgtgt ggggcaagat gggcgcggcc gcgctgcatg
     4141 ccggtaatct ccaggccgcg ctcgaggcct atgctcagct gggcgcccgg gaggcgagcc
     4201 gggtggctga ggccgcccgc gggttggaac gggtggcccg ggcggcccgg cggggagaca
     4261 gcgccagcgc catcctgacg gcggctgtgg tcgccctgcg ccggttggcc ccggatcgtc
     4321 ccctgggccg gctggcccgt gccgccgaag ccccgggaac ggctgaccgg atggaggagt
     4381 tgaatctcat gccgggggcg atcgcgggag ccaacagcag ccaggatgtg aaccggctgc
     4441 tgctgagcta tggtgcggcc ctccgcgcca cgacggcctg cgaccgggcg gtggccatct
     4501 atcggatggc gatccggcgc gcgccgggga tcgaatcccg gaagctggcc ggcgagggct
     4561 tgggcgcctg cgccttgcag ctcggcctcg atgccctggc atcggggcgg gtcgcctttg
     4621 ccgagcagtg gttcgtggag gtgacccagg ccgatcccgc cagcccggtc gggctgcgcg
     4681 cccgcatcgg gtggggggac gcgcgtctca agcaggggga tctgctggga gccgcgattg
     4741 tgtggcagac ggtactgagc gcggcggccg tacccgattc gctgcggcag atggtccaga
     4801 cgcggatcag cgaactcggg tccgccggcg tgcccggcga cagggatagc ggctcatgag
     4861 gatggggata ctcgcagggt tgggtccggt cgcgctcacc gggtgtctgt tcggcggcaa
     4921 gcccaagccg ccccctccgg tggagacggt cgagaccacc cgggtgcggg ccgactccct
     4981 gtatgcggcg gccacggggc atttccggat cggcaaatgg ggcaaggcgg cccaggccct
     5041 ggatcgggcc ctgctgatca tggggtacga cgatccccgc cggcagctgg gccacttcat
     5101 gatgggtgag gtgctcatgg cccaggggaa cca
//
LOCUS       DASWKS010000368         3114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2426836, whole genome shotgun sequence.
ACCESSION   DASWKS010000368 DASWKS010000000
VERSION     DASWKS010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2426836"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VGA78_10545"
     CDS             complement(<1..375)
                     /locus_tag="VGA78_10545"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894354.1"
                     /translation="MITKKILKRLRVPSGEKVRLKDYSPSWAAIPELSALDSEGVEQQ
                     AREVLARNVEELEASQELLWANDVWSVLVILQAMDTAGKDSVIKHVMSGLNPQGCHVV
                     GFKRPSEEELDHNFLWRYMKALP"
     gene            complement(482..1915)
                     /locus_tag="VGA78_10550"
     CDS             complement(482..1915)
                     /locus_tag="VGA78_10550"
                     /inference="COORDINATES: protein motif:HMM:NF025714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4403 family protein"
                     /protein_id="HEX9894355.1"
                     /translation="MSRSIPFWVALALPGCQGRSPPEVVEDEIYEEPRFDLPPSYVSA
                     PLQLDLRPLLRELEAAVPRQIGSVDKAKRLQVSNKAWVAPELSRGPFRFAFAGNRVTV
                     SAIFEYRAKAWFKPFLVEQAVSCGMGKERPRIRVSIATTYDLTADWRLKTDSRLLNLE
                     PVSATERDQCEITFLKIDVTGRVIGAAEAAMQQALTDFDLFVGRVSIRGPVEGIWEKL
                     KRPISIAEGALWLQIRPREVSLGRITAGDSTLVARLDLLASPRILSGPRPLDDTVSLP
                     ALGRTITESDTAVVLIEGLLVYAAANQLMAEALVGRTVGKGWKRVTVDAVSMRAAGRG
                     RVALAVTVSGRSNGVVNVVGTPTYDPEQDRISVPDLVFDVKSQGFRERLVGLLLGGPF
                     LIDLRRLAVFPAAGLLAQAVELANREVNRELSDGIQLRGSLGAARTMHVQATRRGLVA
                     QARGSGRLWLEISKEDLLPSQLRASRR"
     gene            complement(1957..3012)
                     /locus_tag="VGA78_10555"
     CDS             complement(1957..3012)
                     /locus_tag="VGA78_10555"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX9894356.1"
                     /translation="MTITLGAFERLDQRQRTLLTVAALVVIAYGIRAAASVLDSLLLA
                     CLLTVAVLPAFELLRRRGVSKGLATAITSVLLVGIALALLGFLAVSGSQLVQVLPGYQ
                     EKVETLRQALVASLNQRGIEPEQVLSLDLISPARLLGLAAGVLSGAGKVLSQALLLIL
                     IVAFILVETGSRGKAIQPGGRLYLVSRDVRQYLLITAATGLGFALACYILMLFVGTDL
                     ALVWAVLAFVMNFVPSVGIILSVVPPVLLTLLEFGWTRALVILAGFLVLNFIIDNVIK
                     PRFMQSGLDVSPLIGLLSLVVWSFLLGPTGALLALPLTIALKRLFQEGGPEADVVVAI
                     PAAPPQAPPPDAAPAPI"
BASE COUNT          583 a         1078 c          965 g          488 t
ORIGIN      
        1 cggcagcgct ttcatgtagc gccagagaaa gttgtggtcc aactcctcct ccgagggtcg
       61 cttgaagccc accacatggc acccctgtgg attgagcccc gacatgacgt gcttgatcac
      121 gctgtccttg ccggccgtgt ccatcgcctg caggatcacc agcaccgacc agacatcgtt
      181 ggcccagagc agctcctgtg acgcctccag ctcctccaca ttccgggcca ggacctccct
      241 cgcctgctgc tcgacccctt ctgagtccag ggcagacagc tccgggatcg cggcccagga
      301 tgggctgtaa tcctttaacc ggaccttttc tccggaagga acccgtagcc gtttcagaat
      361 cttcttagtg atcatttagg aactcgagtg caggatgcag gagtgcagag tgcataccgc
      421 agggggcgcc ttccgaagcc ttcgacaccc tgcattctgc accgctgcat tccagttccc
      481 atcaacgtcg ggacgctctc agttgtgagg gcaacaagtc ttccttcgag atttccagcc
      541 agagcctgcc cgagccgcgc gcctgggcta ccagcccgcg gcgggttgcc tgcacatgca
      601 tggtgcgggc ggcgcccagc gagccacgca gctgaatccc gtctgacaac tcccggttca
      661 cctctcggtt cgccagttcc accgcctgcg ccagcaggcc agcggctgga aacaccgcca
      721 ggcgccgcag gtcgatcagg aacggcccgc ccagcaacag acccaccagg cgctctctga
      781 acccctgcga tttcacgtcg aacaccaggt cgggcactga gatccggtcc tgctccgggt
      841 cgtaggtggg ggtgccaacc acattgacca ccccattgga ccgccccgat accgtgaccg
      901 ccagtgccac ccggccccgc ccggcggcgc gcatcgacac cgcgtccacc gttactcgct
      961 tccagccttt cccgacggtc cggcccacca gcgcttccgc catcaactgg ttggcggcgg
     1021 cgtataccag cagcccttct atcaacacca cggcggtatc cgactcggtg atggtccggc
     1081 ccaacgctgg aagggatacc gtatcgtcga gcggacgggg accgctcagg attcgggggc
     1141 tggcgagcag atccagtcgt gccaccagcg tcgagtctcc cgccgtgatc cggccgagcg
     1201 acacctcccg cgggcggatc tggagccaca gggcaccctc agcaatcgag attggccgct
     1261 tcagcttctc ccagataccc tccaccggac cccggatgct gacccggccg acaaacaggt
     1321 cgaaatcggt gagggcctgc tgcatcgcgg cttccgccgc cccgatcacc cggccggtga
     1381 cgtcgatctt gagaaaggtg atttcgcatt ggtcccgctc ggtggccgag accggctcga
     1441 gattgagcag ccggctgtcg gtcttgagcc gccaatcggc cgtaaggtca taggtcgtgg
     1501 cgatcgagac ccggatccgg gggcgttcct tccccatgcc gcacgatacc gcctgctcca
     1561 ccaggaatgg cttgaaccag gctttggccc ggtactcgaa gatggcggag acggtgaccc
     1621 ggttaccggc gaaggcaaac cggaagggcc ctcgcgagag ctcgggagcc acccaggcct
     1681 tgttcgagac ctgcagtcgt ttggccttgt cgacggagcc gatctgacgg ggtactgctg
     1741 cctcgagctc tcgcagcaag ggccggagat ccagctggag tggggcactg acatacgaag
     1801 gcggaaggtc gaaacggggc tcctcgtata tctcgtcctc aaccacttcc ggcggactcc
     1861 gcccctggca gcccggcagt gccagggcca cccagaacgg gatcgaacgc gacaagggac
     1921 ccatccccgg gaatcaaccc cccggtgggg ggccggtcaa atcggggcgg gagcggcgtc
     1981 aggaggagga gcctggggcg gcgcggctgg gatcgccacc acgacatcgg cctcgggacc
     2041 gccttcctgg aacagccgct tcagggcgat ggtcagcggc agcgccagca gggccccggt
     2101 cggtcccagc aggaagctcc agaccaccag cgacaacagc ccgatcaggg gcgatacgtc
     2161 caggccgctc tgcatgaatc ggggtttgat cacattgtcg atgatgaagt tgagcaccag
     2221 aaacccggcc aggatcacca gggcccgggt ccagccgaac tcgagcagcg tcagcagcac
     2281 cggcggcacc accgagagga tgatccccac gctgggcacg aagttcatca cgaaggccag
     2341 gaccgcccag accaacgcca gatcggtgcc gacgaagagc atcaggatgt agcaggccag
     2401 cgcgaatccc aggccggtcg ccgccgtgat gaggagatac tgccgcacgt cccggctgac
     2461 gaggtaaagc cggccaccgg gctggatcgc tttgccccgc gatccggtct ccaccagaat
     2521 gaacgccacg atcaggatca ggagcagcgc ctgactgagg accttccccg cccccgaaag
     2581 cactccggcc gcgagaccga gcagccgggc cggactgatc aagtcgagcg acagcacctg
     2641 ttccggctcg attccccgtt gattgaggct tgccaccagc gcctgccgca gcgtttccac
     2701 cttctcctgg taccccggga gcacctggac cagctggctg ccggacaccg ccaggaaccc
     2761 cagcagggcc agcgcgatcc ccaccagcaa aaccgaggtg atggcggtcg cgagcccctt
     2821 ggagacaccc cgcctccgca gcagctcgaa ggccggcagg accgccacgg tcaggaggca
     2881 tgccagcagc aggctgtcca gtacggaggc ggcggcccgg atgccatagg caatgaccac
     2941 gagggcggcg acggtgagga gggtgcgctg gcgctgatcc agcctctcga acgcacctag
     3001 cgtgatcgtc atgggcctgc ctcggctgga gagggcgacg attcaattat agacttcctc
     3061 catgatgcga ctcatctccg ggctggttct gctcctcgtc gcatgcggcg gggg
//
LOCUS       DASWKS010000369         3710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2052755, whole genome shotgun sequence.
ACCESSION   DASWKS010000369 DASWKS010000000
VERSION     DASWKS010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2052755"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1086
                     /gene="obgE"
                     /locus_tag="VGA78_10560"
     CDS             55..1086
                     /gene="obgE"
                     /locus_tag="VGA78_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX9894357.1"
                     /translation="MTFIDLATVTVAAGTGGSGACSFARFKYVPKGGPDGGDGGRGGS
                     IFVVADPNLATLLDYKYRTVWKAERGQHGKGKTMTGRSGDDLVLPVPPGTVVRDTGSG
                     EVLGEALEPGRPILVARGGRGGRGNARFATSTHQAPREWEPGEAGQQRELQLELKLIA
                     DVGLVGEPNAGKSTLLSVISAARPRIADYPFTTLEPNLGVVGLSGARSYVVADIPGII
                     EGAHRGKGLGLQFLRHVERTRLLAFLVPLDAADPAAVYQRLRREVELYSQALAHRPHL
                     LVFTKRDLLPPEAELFPVAAPEAQAVQVISSASGQGLEDLKESLWRRVLQLRLDEADR
                     GHEVLNELE"
     gene            1073..2224
                     /gene="dprA"
                     /locus_tag="VGA78_10565"
     CDS             1073..2224
                     /gene="dprA"
                     /locus_tag="VGA78_10565"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX9894358.1"
                     /translation="MNSNELPLPPLEGEERLAYLSLALVPGIGPGRLRALLSACGSAG
                     GARAAPFAFLRTIPDVGPALATAIQRVRLATAEQVLDDLQRLGGELLLPGDPRFPQSL
                     SPVTPPPLALFAAGKLDFLARPAVAIVGSRDHSRYGAEVCEALAGGAAAAGLVVVSGM
                     ARGLDAVAHRAALAVDGGTIGVLGNGLGVVYPAANRQLYGSVEQHGLLLSELPPGERP
                     HAGAFPKRNRLIAGLARVTVVIEAAVGSGALITANEALDLGRDVMAVPGPVTSPTSVG
                     ANQLLRDGAIAVLELDDLLLRYPEIRPGVGVTGLPLPDPSSPQGKVLALLNSGPRQAD
                     ELAATLRLPTGQVLAVLGVMEIQGMVSQRPGMVFGLAKAKFAAARTIDD"
     gene            2289..3386
                     /gene="hemW"
                     /locus_tag="VGA78_10570"
     CDS             2289..3386
                     /gene="hemW"
                     /locus_tag="VGA78_10570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEX9894359.1"
                     /translation="MLIYVHVPFCARRCSYCDFAIAVRRETPAAAFTESVLAEWRLRQ
                     ELPWWDDAPEVETIYFGGGTPSRLEPAGLARILTGIRAERTILPAAEITLETNPDDVT
                     RERAAAWRESGINRISLGGQSFDPAVLEWMHRTHTADQIEDAVRILRAAGFANLSLDL
                     IYGLPQELTREWSADLERALSLQPEHLSLYALTVESGTPLGKWTTRGTVHSLPDERVA
                     DQYLWANQRLRSAGFQHYEVSNAGRPGFEARHNAGYWQRKPFIGLGPSAHSGAGRDRT
                     WNIREWEAYRRAVESGADPVAGRETLTPDQLVLEEQYLGLRTAAGVSDELVPEPHQTL
                     WLEQGWAVCQNGRVRLTPEGWLRLDALVAGL"
     gene            3430..>3710
                     /locus_tag="VGA78_10575"
     CDS             3430..>3710
                     /locus_tag="VGA78_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894360.1"
                     /translation="MPSADALTERERRVLEAVIHTYIETAEPAGSQTIARRYPLGLSS
                     ASIRSIMSDLEAKGFLYHTHTSAGRIPTDQAYRRYVNDLTRFASPSDHER"
BASE COUNT          562 a         1252 c         1284 g          612 t
ORIGIN      
        1 atccgttcgg gagctggtcc agtcaacgtg ggccaaggtc aggaaacgcg aggcatgaca
       61 ttcatcgacc tggccaccgt cacggtggcg gccggtaccg gcggatcggg cgcgtgttcc
      121 ttcgcccgct tcaagtacgt gcccaagggc ggtcccgatg gaggtgatgg gggtcgcggt
      181 ggcagcatct tcgtggtcgc cgaccccaac ctcgccaccc tgctggacta caagtaccgc
      241 acggtgtgga aggccgagcg cggccagcat ggcaagggca agaccatgac cggcaggtcg
      301 ggcgacgatc tggttctccc ggtgccgccc ggcacggtgg tccgggacac cggttccggc
      361 gaggtgttag gcgaggcgct ggagcccggc cgtcccattc tggtggcgcg gggcggacgg
      421 ggcgggcggg gcaacgcccg tttcgccact tcaacccacc aggcgccccg cgagtgggag
      481 ccgggcgaag caggccagca acgcgagctg cagctcgagc tcaagctgat tgccgacgtc
      541 gggctggtgg gcgagcccaa cgccgggaag agcacgctgc tgtcggtgat ttccgccgcc
      601 cggcccagga tcgccgacta tcccttcacc accctggaac ccaatctcgg tgtggtggga
      661 ctgtcgggcg cccgctccta cgtggtggcc gatattccgg ggatcatcga aggggctcat
      721 cgtggcaagg gcctgggcct ccagtttctg cgccatgtgg agcggacccg tttgctggcc
      781 ttcctggttc cgctcgacgc cgccgacccc gccgcggtgt accagcggct ccggcgcgag
      841 gtggagctct acagccaggc cctcgcgcac cggccccatc tgctggtctt caccaagcgc
      901 gacctgctgc cgcctgaggc ggagctcttc ccggtggcag cacccgaggc gcaggcggtg
      961 caggtgatct ccagcgcctc ggggcagggg ctcgaggacc tgaaggagtc gctctggcgc
     1021 cgggtgctgc agctccggct ggatgaggcg gaccggggac atgaggtgct gaatgaactc
     1081 gaatgagctt ccgctgccgc cgctcgaagg cgaggaacgg ctggcgtatc tctcactggc
     1141 gctggtcccc gggataggcc cgggtcggct gcgagcgctc ctgagcgcgt gtggctcggc
     1201 cggcggcgcc cgcgcggcgc cgttcgcgtt tttgcgcact atcccggacg tgggcccagc
     1261 cctggccacc gcgatccagc gggtgcggct ggcgacggcg gaacaggtcc tggatgatct
     1321 ccaacggtta ggcggtgagc tgctgcttcc gggcgacccc cggttccccc agtcgctgtc
     1381 gccggtgacg ccaccgcctc tggccctgtt tgcggccggc aagctggact tcctggcgcg
     1441 gcccgcggtc gccatcgtgg gcagtcgtga ccacagccgc tatggcgcgg aagtatgcga
     1501 ggcgctggcc ggcggtgcgg ccgcggccgg actggtggtg gtgagtggca tggcccgcgg
     1561 gttggacgcg gtggcccacc gggccgcgct cgcggtcgac ggcggcacca ttggtgtcct
     1621 gggcaatggt ctgggcgtgg tgtacccggc cgccaatcgc caactctacg gctcggtgga
     1681 acagcacggt ctccttctca gcgagttgcc accgggggag cgtcctcacg cgggtgcgtt
     1741 tcccaagcgc aaccgtctga tcgccggcct ggcccgagtc acggtggtca tcgaagcggc
     1801 ggtcggttcc ggcgcgctca tcaccgcgaa tgaggcgctc gatctgggac gcgatgtcat
     1861 ggcggtcccc ggtccagtaa ccagccccac ctcggtcggg gccaaccagc tgctgcgcga
     1921 tggggccatt gccgtgctcg agctggacga tctgctcctg cgctacccgg aaatccgccc
     1981 gggggttggg gtgaccggtt tgcccctccc ggatccgtca tctccccagg ggaaggtgct
     2041 cgcgctgctc aacagcggcc cgcggcaggc cgacgagctg gcggccacgc tgcgtctgcc
     2101 caccggacag gtgttggcgg ttctgggagt gatggagatc cagggtatgg tgtcgcaacg
     2161 gcccgggatg gtgtttgggc tggcgaaggc aaagtttgcc gcggccagaa ccattgacga
     2221 ttgacgattg acggttgacg attacgcggg ggcggggcaa tcgtcaatcg agaaatcgtc
     2281 aatcgccaat gttgatctac gtccacgtcc ccttctgcgc ccggcgctgc agctactgcg
     2341 attttgcaat tgcggtccgg cgggaaacgc ccgccgccgc cttcaccgaa tcggtgctcg
     2401 cggagtggcg cctgcggcag gagctgccct ggtgggacga tgcacccgag gtcgagacca
     2461 tctatttcgg tgggggcaca cccagccgcc tggaacccgc cggcctggcg cggattctga
     2521 ccggcatacg cgccgagcga accatcctcc cggccgcgga gatcaccctc gagaccaatc
     2581 cggatgacgt gacccgggag cgggccgcgg cgtggcggga gagcggaatc aatcggatct
     2641 ccctcggcgg ccagtcgttc gatcccgcgg tactggaatg gatgcaccgc actcacaccg
     2701 cggatcagat cgaggacgcg gtccggatcc tccgggccgc cggcttcgcg aatctctcgc
     2761 tcgatctcat ctatgggcta ccccaagagc tcacccgcga gtggagcgcg gatctggagc
     2821 gggccctgtc tctccagccg gagcatctct cgctctacgc tctcaccgtg gaatcgggga
     2881 ctccgctcgg caaatggact acccgcggga cggtgcactc cctgcccgat gaacgggtgg
     2941 cggaccagta tctctgggcc aaccagcggc tccggtcggc cgggttccag cattacgagg
     3001 tgtccaacgc cggccgcccc ggattcgagg cccgccacaa tgccggatac tggcagcgca
     3061 aacccttcat cgggctcggg ccctcggccc atagcggagc cggtcgggac cggacctgga
     3121 acatccggga gtgggaggca taccggaggg cagtggaatc gggtgccgat cctgtcgccg
     3181 gtcgcgagac gctcacgccc gaccagctcg tcctggaaga gcagtacctg ggcctccgga
     3241 ccgcagcagg cgtctccgat gagctggtcc cagagcccca ccagaccctc tggctggagc
     3301 agggctgggc cgtatgccag aatggccggg ttcgactcac ccctgaaggc tggctccgcc
     3361 tggacgcgct ggtcgcaggg ttgtgacact cagtcctcgg cactctgcac tcagtactag
     3421 atttacgaga tgccgtcggc tgacgccctt accgaacgcg agcgccgcgt gctcgaggcg
     3481 gtcattcata cttacatcga gacggctgag cccgccggga gccagaccat tgcccggcgt
     3541 tacccgctgg ggctctcgtc tgcctcgata cgctccatca tgagcgacct cgaagccaag
     3601 ggattcttgt accacaccca cacgtccgcc ggccggattc cgaccgacca ggcctaccgc
     3661 cgctacgtga acgacctcac ccggttcgcc tcgcccagcg accacgagcg
//
LOCUS       DASWKS010000370         2757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2429078, whole genome shotgun sequence.
ACCESSION   DASWKS010000370 DASWKS010000000
VERSION     DASWKS010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2429078"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..886)
                     /locus_tag="VGA78_10580"
     CDS             complement(17..886)
                     /locus_tag="VGA78_10580"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX9894361.1"
                     /translation="MTTVYPLKFQIGPLEITGFGLMMMASFIVGGWLVAQELKRRRLN
                     EDYAGDIILGAVVGGIVGAKLWFVGLHGLDTLFSRGGLVWYGGFFGGCTGVILMSLRR
                     GVPIRLTAHLVAPALPAAYAVGRIGCFMVGDDYGFPTTVPWAVKFPQGLPPTTAGSLA
                     EFGFRVPDGVIPTEVLAVHPTMLYETAIMTVVFMVMWKLRRKAWGTGWLFGLYLVLAG
                     AERFWVEFYRAKDDRFLAGFTLAQATSAVIVLIGLVVIGRLKNAAEAAPGTFLGGRAD
                     RGAGGQAGGRAVT"
     gene            complement(1044..2072)
                     /gene="tsaD"
                     /locus_tag="VGA78_10585"
     CDS             complement(1044..2072)
                     /gene="tsaD"
                     /locus_tag="VGA78_10585"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEX9894362.1"
                     /translation="MAEFVLGIETSCDETSAAVLQVEHGRSTLQSLVILSQDVHQIFG
                     GVVPELASRAHLRTIGPVVDRSLAEAGIGLDQVRGIAATAGPGLIGPLLVGLTYAKTL
                     AWKRELPLVGVHHLEGHLFAPTLEQPDLSPPFVALLVSGGHTMLLEVRAWGRYRLLGQ
                     TRDDAAGEAFDKVAALLGLGYPGGPVIERLAGEGRPGRFRLPRPMLDAEGADRFAFSF
                     SGLKTAVLRAVQLSDNLERDRADLARAFQDAAIEVLAVKTARAVEECGVDTVVLGGGV
                     ACNQALVESVRRSVGPSVRLAVAAPRLNTDNAAMIAAAGAWRLAQGERSGWDLEARDD
                     LPFPGLVK"
     gene            complement(2065..2661)
                     /locus_tag="VGA78_10590"
     CDS             complement(2065..2661)
                     /locus_tag="VGA78_10590"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX9894363.1"
                     /translation="MASSNGRQWGYVAAIVGGLALGAVLLTKLAPVPDGVEVGRRAPD
                     FKALDIASGDTVSLREKYAGKVVLVNIWATWCIPCRKEMPAMQELYDKLKDHGFAIAA
                     VSVDEGNLADVTAFTSDLGLTFDILHDKSGKIEQVYQTTGVPESFLIGKEGNIVRKQI
                     GEHPWSSPANQRIVAKLLGIELPSESAVVPAAAPDRDG"
BASE COUNT          485 a          986 c          856 g          430 t
ORIGIN      
        1 ccgcaccgcc gggctcctag gtcaccgccc gtccgcccgc ctgtccgccc gcccccctgt
       61 ccgcccgccc gcccaggaat gttcccggtg ccgcctctgc cgcgttcttc aatcgcccga
      121 tcactaccag accgatcagc acgatcaccg cactggttgc ctgggccaac gtgaatcccg
      181 cgagaaaccg gtcgtccttc gcccgataga actccaccca gaaccgttcg gcgccggcca
      241 gcaccaggta gaggccgaac agccagccgg tgccccaggc tttgcggcgc agcttccaca
      301 tgaccatgaa caccaccgtc atgatcgcgg tttcgtagag catggtcgga tggaccgcga
      361 gcacctcggt ggggatcacg ccgtcgggca ctcggaatcc aaactcggcc aggcttcccg
      421 ccgtggtggg ggggagaccc tggggaaact tgacggccca cggcacggtg gtggggaagc
      481 cgtagtcgtc ccccaccatg aagcacccga tccgtcccac cgcataggcc gcgggcagag
      541 ccggcgcgac cagatgggcg gtcagccgga tcggcacacc gcgccggagg ctcatcagga
      601 tgaccccggt gcacccgccg aagaacccgc cataccagac cagcccgccc cggctgaaca
      661 acgtgtcgag tccgtgcagt cccacgaacc agagcttggc ccccacgatc ccgccgacca
      721 cggcgcccaa gatgatgtcg ccggcgtagt cctcgttcag tcgacgccgc ttgagctcct
      781 gcgccaccag ccagccgccc acgatgaacg acgccatcat catcaggccg aagccggtga
      841 tctcgagcgg accgatctgg aacttgaggg ggtaaacggt tgtcattggt cgtcaggtct
      901 taggtaggac ttttgaggga ggaataaact ggagagtgcc caatgcccag tgccgattgt
      961 agagcgggac tcgcatcacg gacaccttct gccatgggca ttgggcactg ggcattctcc
     1021 agttcattcc cgcctccaac ccctcacttc accaatccag gaaaaggcag atcatcacgg
     1081 gcctccagat cccacccgct gcgttcgccc tgggccaagc gccacgcgcc cgcggccgcg
     1141 atcatcgccg cattgtcggt gttgagccgg ggggccgcga cggccaggcg gaccgacgga
     1201 ccgacggacc gacggaccga ctcaaccaac gcctggttgc aggccacgcc gccgcctaac
     1261 accaccgtat cgactccgca ttcctccact gcgcgcgccg tcttcaccgc cagcacctcg
     1321 atcgcagcgt cctggaaggc ccgggcgaga tcggcccggt cgcgctccag gttgtcactg
     1381 agctggacgg ctcggagcac cgcggtcttg agcccgctga acgagaaggc gaagcgatcg
     1441 gctccctcgg cgtccagcat ggggcggggc aggcgaaacc ggccgggacg gccttcaccc
     1501 gccagccgtt cgatgaccgg accaccggga tagcccaggc ccagcagcgc cgcgacctta
     1561 tcgaaggcct cgccggcggc atcatcccgg gtttgtccca gcaggcgata ccgaccccac
     1621 gcccgcacct cgagcagcat agtgtgaccc ccgctcacca gtaacgcgac gaacgggggt
     1681 gagagatcgg gctgctccag ggtcggggcg aacaggtggc cttcgaggtg gtgcactccg
     1741 accaagggaa gttcgcgctt ccaggccagg gtcttggcgt aggtgagtcc caccagcaga
     1801 ggaccgatca ggccggggcc ggctgtcgcc gcgatgccgc gcacctggtc cagcccgatc
     1861 ccggcttccg ccagcgaccg gtcgaccacc ggtccgatgg tgcggagatg ggcccggctg
     1921 gccagctccg gcaccacacc cccgaagatc tggtggacgt cctgggagag gatgaccagg
     1981 ctctggagcg tcgagcgacc gtgttccacc tggagcacgg ccgcggaggt ttcgtcgcag
     2041 gaggtttcga tgccgagaac gaactcagcc atcccggtcg ggggcagccg cgggcaccac
     2101 ggcggattcg gagggcagct cgatgcccag cagcttcgcc acgatccgct ggttggcggg
     2161 cgagctccag ggatgctcgc cgatctgctt cctcacgatg ttgccttcct tgccgatcag
     2221 gaaactttcc ggcacgccag tggtctggta gacctgctcg atcttccccg atttgtcgtg
     2281 caggatgtcg aaggtcaacc ccaggtccga tgtgaatgcg gtgacgtcgg ccaggttccc
     2341 ttcatcgacg ctcacggcgg cgatggcaaa gccgtggtcc ttgagcttgt cgtacagctc
     2401 ctgcatcgcg ggcatttcct tgcggcaggg gatgcaccag gtggcccaga tgttcaccag
     2461 caccaccttg ccggcgtact tctcccgcaa cgagaccgta tcgccgctgg cgatgtccag
     2521 tgccttgaag tcgggagcgc ggcgtccgac ctccacccca tcggggacgg gggcgagctt
     2581 ggtcaacaac accgcaccca gcgccaatcc gcccacgatg gccgccacgt agccccactg
     2641 tctcccgttg ctgcttgcca tgcttacacc ctcactgtgc acgcgccctt gagggcccgg
     2701 acggcttcgg ccggatcggc ctcaccgaag acggccgttc cggccacaaa agtgtcg
//
LOCUS       DASWKS010000371         4583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_570389, whole genome shotgun sequence.
ACCESSION   DASWKS010000371 DASWKS010000000
VERSION     DASWKS010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4583
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570389"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..674
                     /locus_tag="VGA78_10595"
     CDS             <1..674
                     /locus_tag="VGA78_10595"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9894364.1"
                     /translation="VMHPAARVIQTGTRDGAPFNRVNSLDDFLKAIGAAAGRGLEERI
                     YHPEVRVDDNLATVWVQYDFLVGGQVSHCGVDSYQLVRTAEGWRVLQVVDTQRREGCA
                     DISRAAQAAHDRRVDYVEIPVTDVPGAKRFYQEAFGWTFTDYGPDYASFTDGRLSGGL
                     RKAERRAGSGILVVLYAKDLDAMQARITQLGGRVVRATHQFPGGRRFHFADPSGNELA
                     VWSDR"
     gene            complement(759..1622)
                     /locus_tag="VGA78_10600"
     CDS             complement(759..1622)
                     /locus_tag="VGA78_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894365.1"
                     /translation="MRPGLLALAALLSAAGAAQAQDDCRPGPESNEAQTLGIFSVPLA
                     FSPAGAPGPGSGRVRFALEASYLPEVDPETATPTICRPGKGPENTDLLIGFLRPRVVL
                     RVGNHVAIDAAWVPPIRVNGVKANLVGLAVGWSTDLGQSVSLGLRAHMTLGQVNAPIT
                     CSEEALLDPLSECFEGTESDDRYQPNIYGADATFGFRAAGGRIRPYLGAGYNRLVPRF
                     QVNFVNRLGELDNRRVFVDLNRAVVFGGLAWQAGSRFSLVGEIYSAPADATTGRVVLS
                     VGQSVSRSVDQ"
     gene            complement(1619..2284)
                     /locus_tag="VGA78_10605"
     CDS             complement(1619..2284)
                     /locus_tag="VGA78_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894366.1"
                     /translation="MRRSFHGVSVLAALALACSGDDDGGINPNELSMSLGNPSGNVQT
                     GPPNAQLGPFRVRLTRGGTPASGLAVTWSVTSGGGTLNVPTSITDDQGDAEAVLTLGP
                     TAGVVTVTATSTGAQGSPRTFNATAVVPGEFAQVEVRNNDFAPTNVAINVGGTVAFVW
                     PVGAEDHNIVPVAPATRPSQETVRDGPFTHEESFSTVGTFQYFCSVHGSATTGMRGQV
                     VVQ"
     gene            complement(2359..3699)
                     /locus_tag="VGA78_10610"
     CDS             complement(2359..3699)
                     /locus_tag="VGA78_10610"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9894367.1"
                     /translation="MRTAGTTAGHGLAGRLVLFGVGLAACGTEVYSGREDVAAEAGEA
                     ILAPSQLATWVARSPSRPPNANDAGFVALAWIDYSLLADAVAGGAGLTDSVTAAQALE
                     PDLTLLPLRRWHDSLIARRPRVAPDQPDTLFADDGLRVFQQIFLRIADPNDVRANTAV
                     RERAESLMVRVRAPGADFSGLARQHSEDPTAPLGGWLPPSRRTGFLPEFVRGTWRIKP
                     GETHGVITRSGFHIVRRPPLEEVRDRLRQYAESLATRRADSVYLDSLVAARRLALGTD
                     VPERLRGFFNDPSRRTGDTQPLAQWEGGQLLLERAAIWIDLLPPRAYLDLRGTSDVLL
                     ERFTRELAQQFLLFDEAGRNGIGVTSADWARLYPGYQRGLGLSLGMLGADSSGGLPAA
                     EREARVNALIDQLTSDSTRWRALPSALGAVLRARAGYRLHQRGLDRAVAEAATK"
     gene            complement(3715..>4583)
                     /locus_tag="VGA78_10615"
     CDS             complement(3715..>4583)
                     /locus_tag="VGA78_10615"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9894368.1"
                     /translation="ESGDYVALLKITSDFLDAADKLPTEAARRMHRLELKRLLSKHYI
                     AQFARMAGTGAQRDLAVDVLRRLGSDATEILMDLLIETEAMAERRGYFSALTRMEDGT
                     EIIVHHLEHPQWYVVRNAAELCGEMRLVNSVPRLAHQATHADERVRRSVAVALARIGT
                     PEALEPLARMLKDASPQVRIQMLGNLDGSKARPLAMPLAALLQTEEHPDVLREVLRAL
                     GRIGTPDALLALRRVAQGEVRRFGKRIRLQAIESLGSVGAPGAQILRGLAGDTDPEIG
                     FAAAKALQDSTV"
BASE COUNT          756 a         1543 c         1577 g          707 t
ORIGIN      
        1 cggtgatgca ccccgcggcc cgcgtgattc agaccggcac ccgtgatggc gcgccgttca
       61 atcgggtgaa ttcgctggat gatttcctca aggccatcgg cgccgccgcg ggccgggggc
      121 tggaggaacg gatctaccat ccggaagtac gggtggacga caacctcgcc accgtatggg
      181 tgcagtacga cttcctggtg ggcggccagg tgagtcactg cggcgtcgac agctaccagc
      241 tggtgcggac ggccgaaggc tggcgggtgc ttcaggtggt ggacactcag cggcgcgaag
      301 gctgcgccga catctcccgg gcggcccagg cggcccacga tcggcgggtc gactacgtcg
      361 agatcccggt caccgacgta ccgggcgcca agcggttcta ccaggaagcc ttcgggtgga
      421 ccttcaccga ttacggcccc gactacgcca gttttaccga cgggcgtctc agcggcggtt
      481 tgcgcaaagc ggaacgccgg gccggaagcg gcattctcgt ggtgctgtat gccaaggact
      541 tggatgcgat gcaggcccgg atcacccagc ttggcgggcg ggtcgtccgg gcgactcacc
      601 agttccccgg cggcaggcgg ttccacttcg ccgacccgag cggcaacgaa ctggcggtgt
      661 ggtccgatcg ctgacggaag ttggtccgtc ggtccgtcgg tccgagttga agttcggccg
      721 actagctgac cggacgaccg cctgaccgcc cggctgagct actgatcgac cgaccgactg
      781 accgactgac cgactgacaa caccactctc cccgtcgtgg cgtcggctgg tgcggagtag
      841 atctctccca ccaggctgaa cctggaacca gcttgccaag ccaacccgcc gaagaccacc
      901 gcccgattca ggtcgacgaa gacccggcga ttatcgagct cacccagacg gttgacgaag
      961 ttcacctgga agcggggaac cagccggttg taccccgcgc caaggtaggg tcggatccgg
     1021 ccgcccgcgg cgcggaagcc gaaggtcgcg tccgctccgt agatgttcgg ctggtagcga
     1081 tcgtccgact cggtgccctc gaagcactcg ctgagcggat ccagcagagc ttcctcggaa
     1141 caggtgatcg gagcgttgac ctgaccgagg gtcatgtgag cccgcaggcc caggctgacc
     1201 gactggccca gatcggttga ccaccctact gccaatccga ccagattggc cttgacgccg
     1261 ttgacccgga tcggcggtac ccaggccgcg tcgatcgcca catgattgcc cacccgcagg
     1321 accacccgag gacggaggaa gccgatcaga agatcggtgt tctccggtcc tttgccgggg
     1381 cggcagatgg tgggagtcgc ggtttcgggg tcgacctcgg gcaagtagct cgcctcgagg
     1441 gcgaatcgta cccgtcccga tccgggtccg ggcgccccgg cgggcgagaa ggccagcggc
     1501 acactgaaga taccgagcgt ctgcgcttcg ttggattccg gaccggggcg acaatcatcc
     1561 tgggcctggg cagcgccggc cgccgagagg agggccgcaa gagccagcag cccgggtctc
     1621 actggaccac gacctgaccc ctcatgccgg tggtggcgct cccgtgcacg ctgcagaaat
     1681 actgaaaggt ccccaccgta ctgaagctct cctcgtgggt gaacggaccg tcacgcaccg
     1741 tttcctggct gggcctggtg gctggagcca ccggcacgat gttgtgatct tcggcgccca
     1801 caggccagac gaatgccacg gtaccgccga cgttgatggc gacgttggtc ggggcgaagt
     1861 cattgttgcg cacttcgacc tgggcaaact caccgggtac gacggcggtc gcgttgaagg
     1921 tccgaggaga accctgcgcc ccggtcgagg tagcggtcac cgtcacgacg ccggccgtgg
     1981 ggcccaacgt caggaccgct tccgcgtctc cctggtcgtc cgtgatgctg gtgggcacgt
     2041 tcagcgtgcc gccgccggag gtcacgctcc aggtgacggc gagccccgac gccggggtac
     2101 cgccgcgggt cagacgaacc cgaaagggcc cgagctgagc gttgggcggc ccggtctgga
     2161 cgttgccgct ggggtttccc aatgacatgc taagctcgtt gggattgatc ccgccgtcgt
     2221 catcgccact gcaggcgagg gccagcgcag ccagcaccga aacgccgtgg aaggagcgtc
     2281 gcatagacag cctccgaaac agctggattg gggcgtttag gagacgccaa ccaccggttt
     2341 tcgccgcaca tgaaaagctt acttggtcgc ggcctccgcg accgcccggt ccaatcctcg
     2401 ctggtgcagc cggtatccgg cccgggcccg gagcaccgca cccaacgcgc tgggcagcgc
     2461 cctccaacgg gtcgaatcgg aggtcaactg gtcgatcagg gcgttgaccc gagcctcccg
     2521 ctcggccgcg gggaggccgc cgctggaatc cgccccgagc atcccgagcg acaagccgag
     2581 cccccgctgg tagcccgggt agagccgggc ccagtccgcg gatgtcaccc cgattccgtt
     2641 tcgccccgcc tcgtcgaaga gcagaaactg ctgagccaac tcgcgggtaa atcgttccag
     2701 gagaacgtcg ctggtgccgc gcaagtcgag ataggcccga ggcggcagca ggtcgatcca
     2761 gatggcagcc cgttccagca gcagctgacc gccctcccat tgcgccaggg gctgggtgtc
     2821 gccggtccgg cgcgaagggt cgttgaagaa acctcgcagc cgttccggca cgtcggtccc
     2881 cagcgccagc ctccgggccg cgaccagact atccaggtac accgagtcgg cccgccgggt
     2941 cgccagcgat tcagcgtact ggcgcaggcg atcccggacc tcctcgagcg gagggcgccg
     3001 gacgatatgg aatccgctgc gcgtgatgac gccgtgggtt tctccgggct tgatgcgcca
     3061 ggtcccgcgg acgaactcgg gaaggaaccc ggtccggcgc gagggtggca gccatccgcc
     3121 caggggcgcg gtgggatcct cggagtgctg ccgggccaag ccgctgaaat ccgcccccgg
     3181 cgcgcgaacc cggaccatga gggattccgc ccgctcccgc accgccgtgt tggcgcggac
     3241 atcgttgggg tcggcgatcc ggaggaagat ctgctggaag acccgcagtc catcgtccgc
     3301 aaacagagtg tccggctgat cgggggcgac gcggggacgg cgggcgatca ggctgtcatg
     3361 ccaccggcgc agtggcagca gcgtgaggtc gggctcgagg gcctgggcgg cggtcaccga
     3421 atcggtgagc ccggcgccgc cggccacggc gtctgccaga agggaatagt cgatccaggc
     3481 cagcgcgacg aaccccgcgt cgttcgcgtt aggcggccgg gagggtgacc tcgctaccca
     3541 ggtggccagt tggctcggtg ccagaatggc ttcgcccgcc tcggccgcga cgtcctcccg
     3601 gccgctgtag acctcggtgc cgcaggcggc cagcccgacg ccgaacaaca ccagccggcc
     3661 ggccagtccg tggccggcgg ttgtcccagc agtgcgcatg gtcgaactcc ggattcaaac
     3721 ggtggagtcc tgcagcgcct tggccgcggc gaagccgatt tctggatcgg tatctcccgc
     3781 caggcccctc aggatctgtg ctcccggtgc gccgaccgac ccgaggcttt cgatcgcctg
     3841 tagccggata cgcttcccga agcggcggac ctcgccctga gccacccggc gcaacgcgag
     3901 cagtgcatcc ggggttccga tccggcccag ggcccgcagc acttcgcgga gcacgtcagg
     3961 atgctcttcg gtttgcagga gcgccgcaag gggcatggcc agaggcctgg ctttggagcc
     4021 gtccagattg ccgagcatct ggatccgaac ctggggggaa gcgtccttga gcatccgggc
     4081 cagcggctcc agggcttcgg gcgtgccaat gcgggcgagg gccaccgcca ctgaccggcg
     4141 gacccgctcg tcggcatggg tcgcctggtg cgccagccgg gggaccgagt tgaccagccg
     4201 catctccccg cacagctcgg cggcgttccg gactacgtac cattgcggat gctcgagatg
     4261 gtggacgatg atctcggtgc cgtcctccat gcgggtgagc gccgagaaat agcctcgccg
     4321 ctccgccatc gcttcggttt cgatcagcag gtccatcaga atctcggtgg cgtcggagcc
     4381 gagccgccgc agcacgtcga ccgcgagatc gcgttgcgcc ccggtccccg ccatgcgagc
     4441 gaactgggcg atgtagtgct tcgagagcag ccgcttgagc tccaggcggt gcatccggcg
     4501 ggccgcctcg gtgggtagct tgtcggccgc atccagaaag tcactggtga tcttgagcag
     4561 cgccacatag tcaccggact cca
//
LOCUS       DASWKS010000372         6310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_927760, whole genome shotgun sequence.
ACCESSION   DASWKS010000372 DASWKS010000000
VERSION     DASWKS010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6310
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927760"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1423)
                     /gene="coaBC"
                     /locus_tag="VGA78_10620"
     CDS             complement(230..1423)
                     /gene="coaBC"
                     /locus_tag="VGA78_10620"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEX9894369.1"
                     /translation="MRLAGRRLLLGVSGGIACYKSCILVRRLREAGALVDVVMTRGAT
                     RFVRPVTFEALSGRPVRTSLWTRGEALDHVRLAEEAELIVLAPATADLLARAALGLAD
                     DLLTSMLLARSGPVLAAPAMNDRMFAAAPTRSHIASLAARGWHFVGPAIGPLAEGESD
                     TPGRMSEPEEIAEHAARLLLSGGPLQGSRVVVTAGPTREAIDPVRVITNRSSGKMGYR
                     LAEAAWRRGALVTLISGPSSETAHSGINTIRVESTAELRDRLAERLPETDVLIMAAAP
                     ADYAPANRATEKTPRQSGNLTLALVSTPDILSDTKSLRKAGMLTVGFALETGDALAKG
                     RAKLERKDLDLIVVNDALQPGAGFEVDTNIVSILHKDSRQTNVSLASKAQIAEAILDV
                     VEAEL"
     gene            complement(1423..1650)
                     /locus_tag="VGA78_10625"
     CDS             complement(1423..1650)
                     /locus_tag="VGA78_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894370.1"
                     /translation="MEIFTPQDAAKTGGTKYRAILIAAKFARMLNEMPKDHQVSWDEE
                     DRQQKLTTLAMSKLVDGDLGFRELRRRRSEV"
     gene            complement(1770..2417)
                     /gene="gmk"
                     /locus_tag="VGA78_10630"
     CDS             complement(1770..2417)
                     /gene="gmk"
                     /locus_tag="VGA78_10630"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX9894371.1"
                     /translation="MRPFLLVLSSPSGGGKSTITRRLLAERTDVGYSVSATTRAPRAG
                     EQDGVHYHFLTPEEFAGREAAGEFIEAATYGGFRYGTLRSEVERVLASRRHVLLDIEV
                     DGARQVRQAAPDSVHVFLLPPSAAILAERLQGRNTEDGAALSRRMEIADRELASVAAY
                     DYLVVNDNLAEAVKQVGAIIDAESRRVNRLTHLDETVSRLRQELGTNTRSRNSEQ"
     gene            complement(2414..3289)
                     /locus_tag="VGA78_10635"
     CDS             complement(2414..3289)
                     /locus_tag="VGA78_10635"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEX9894372.1"
                     /translation="MPFSMTGFGAAEGPVAGGHLRVEIRTVNHRFFNPAFKLPSDLAP
                     LELDLRERLRKEFERGHVAVSMRWVNGSHGPGSLQLNVDRAREAMARLRELQTAVGLS
                     GEISLELLARQMDVLTLGENETPAVAWTEVEPIVADAATDCRAMRRREGDALASELRQ
                     HLEELARMTRDIESRAPERMVHERDRLRMSIAELLEGRPVDDGRMAQELAFIAERLDI
                     TEELVRLRAHFGATEAALAKPGAIGKQLGFLVQEMGREINTIGSKANDAAIAQTVIAM
                     KGELEKFREQVENLE"
     gene            3453..3800
                     /locus_tag="VGA78_10640"
     CDS             3453..3800
                     /locus_tag="VGA78_10640"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9894373.1"
                     /translation="MARKDPDLLQGTLDLLILKTLGLEPQHGWAIAKRIQAISRDVLL
                     INQGSLYPALYRLEDEDLISGEWRVSDEGRRIKVYHLTAAGRARLVRETNTWRLFSGA
                     VDLILAAEHPGGS"
     gene            3797..>6310
                     /locus_tag="VGA78_10645"
     CDS             3797..>6310
                     /locus_tag="VGA78_10645"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894374.1"
                     /translation="MKWWRKAVRRLRLLTAPRAVERDMDDEIRFHLLEATRELERTGL
                     SPVAARRSARLSFGGVEATKEHARDARGGRVLSDLVADVRYAVLRTVRAPLHSGSVVI
                     LLGVAIAGVGLSMALARAYLLRPLPFPAPERLVSVLTAPTRAPLPNPPDLRAVDWTSA
                     ARLFEGTVAWDLDGFTLVGNGPPEYVDGSWVSPGFFELLAVRPALGRAFLPSEYVPGS
                     TVALISDGLWRRRFGADSRVVGSTVRAHSTDRPDEDALITIVGVLPPADWQLHRFTDM
                     LRPLGTPRMFSLARLPAGLTPTAAAARLTAVVREQVAVGDSSWRMSLVSTQDEHVYQI
                     RPVLHVLLAAALLLLLLAQASAGALLLARTTARIGELGVRRALGATRGRLARQLAAEA
                     ALLGALGFALGVGLTPVLAGFLTRGMESFGEVTVPGGVDSVGLDPLVVLAVFIVTAVP
                     FGFLALLPLQSLAAREGTHALSRITPPRGATRMRRLLATVQVVVAVALLSQGALLLQS
                     VRAMLRVDLGFEPEGLLKAHVLLPRTTYPDGDARRLAMTRILDRIRQVPGVVDAASGH
                     PHPFRPAPFLAVECDGCDPGAGRPLAVPTTVTPGYFATMRIPLVTGRLFDQRDLPDGE
                     PVTVVSRALATRLWSTGDAVGRRLRLGNVDSPGPWLTVIGVVGEVRKTYSDSLYPDLY
                     RPFAQAPRAYAALLVRTGGDPLPLQDQIRLAVAAEDESLALSDVEPMRSLLSARRGRP
                     GILAAFVGGVAVVAFGLTIFGLHAVVGYLVRLRRREFAVRVALGAKPGQIVYAVLAEA
                     RPMLGLGLAGGVALAWATVGLSRAFIVGISPNDPMTYAGV"
BASE COUNT          881 a         2198 c         2113 g         1118 t
ORIGIN      
        1 atcggcggcg cgtcgctgcg ccaatccttc ttcgggcggg cgggcggact ggcgggctgg
       61 cggtcgagag ccggactgac ggacgggcgg accgacggac ggttcgtcag gataacctcc
      121 ggcccaccca gctcagcctg aatgcggaga tatgtggcac ggggatcagg cacgtgttgt
      181 taccgtccgt ctgtccgact gtccgactgt ccgactgtcc gcccgcccgt cagagttccg
      241 cttccaccac gtcgagaatg gcctcggcga tctgcgcctt gctggcgagc gacacgttgg
      301 tctggcggct gtccttgtgc aggatgctca cgatgttcgt atctacctcg aagcccgctc
      361 caggctgcag cgcatcgttc accacgatca gatcgaggtc ctttcgctcc agcttggccc
      421 ggcccttggc cagcgcatcg ccggtttcca gcgcgaaccc caccgtcagc atgcccgctt
      481 tgcgaaggga tttggtgtcg gagagaatat ccggtgtgga cacgagtgca agcgtcagat
      541 tcccggattg gcgcggtgtc ttctcagtgg cgcgattggc cggcgcgtaa tcggccggtg
      601 ccgccgccat gatcagcaca tcagtctcgg gcagccgctc cgccagccgg tcccgcagct
      661 ccgcggtgct ctccactcgg atggtgttga tacccgagtg cgccgtctcg ctgctgggcc
      721 cggagatcag tgtcaccagc gcgccgcggc gccacgccgc ttcagccagg cggtagccca
      781 tctttccgct cgaccggttg gtgatgaccc gcaccggatc gatcgcctcc cgggttgggc
      841 cagccgtgac caccacccgg ctgccctgca gcggtccgcc ggacagcaac aagcgggcgg
      901 catgctcggc gatctcttcc ggctcgctca tccgtcccgg tgtgtcgctt tcaccctcgg
      961 ccagcggacc gatggccggt cccacgaagt gccagccgcg ggcagccagc gaggcgatgt
     1021 ggctccgggt cggagcagcc gcgaacatcc ggtcgttcat ggcgggggcg gccaggaccg
     1081 ggccgcttcg ggccagcagc atcgaggtga gcagatcatc ggccaggccg agcgcggccc
     1141 gggcgagcag gtcggcggtg gccggggcca gcacaatcag ctccgcctcc tcggccaggc
     1201 gcacgtgatc cagcgcctcg ccccgggtcc acagcgaggt ccggaccggc cgcccgctca
     1261 gggcttcgaa cgtcacgggg cgcacgaacc gcgtagcgcc ccgggtcatt acgacgtcca
     1321 ccagcgcacc ggcctcacgc agccgtcgca ccaggataca gctcttgtag caggcgatcc
     1381 cgccggagac gccgagcagc agccgacgtc cggcgagccg catcagacct ccgagcgccg
     1441 ccgccgcagc tcgcggaagc cgagatcgcc atccaccagc ttggacatgg cgagcgtggt
     1501 gagcttctgt tggcgatctt cctcgtccca gctgacctga tggtccttgg gcatctcgtt
     1561 gagcatccgg gcgaacttgg ctgcgatcag aatcgcgcgg tacttggtgc ccccggtctt
     1621 ggcggcgtcc tgcggcgtga agatctccat ccttcttacc tctccgtagt ggattcgagt
     1681 ccggtcaacg gtaaacggta aacggtcaac agtgaaccgt ctccgcgttc cggccggctc
     1741 attaccggtt accgttcact gttcactgtt cactgttcac tgtttcggga ccgagtgtta
     1801 gtgccgagtt cctgccgcag tcgcgagacg gtctcgtcga ggtgggtgag ccggttgacc
     1861 ctccggcttt cggcatcgat gatcgcgccc acctgcttca cggcctcggc caggttgtca
     1921 ttcaccacca gatagtcgta ggcggcgacg ctggccagct cgcgatcggc gatttccatc
     1981 cgccggctca gggcggcccc gtcttcggtg ttccggccct ggagtcgttc ggccaggatc
     2041 gccgccgaag ggggcagcag aaacacgtgt accgaatcgg gggccgcctg cctcacctgg
     2101 cgcgcgccat ccacctcgat gtccagcagc acgtgccgcc gactcgccag caccctctcg
     2161 acctcggagc ggagcgtgcc gtaccggaag ccaccgtagg tggccgcctc gatgaactcg
     2221 cccgccgctt cgcgcccggc aaattcctcc ggggtgagaa agtgatagtg gaccccgtct
     2281 tgctccccgg ccctcggagc gcgggtcgtc gccgacaccg agtatcccac atccgtgcgc
     2341 tcggccagca atcggcgcgt gatggtggac ttgcctccgc ccgacggcga cgagagcacg
     2401 aggagaaacg gtctcactcg agattctcga cctgctcccg gaacttctcc agctcgccct
     2461 tcatcgcgat cacggtctgg gcaatggccg catcgttggc cttcgagccg atggtgttga
     2521 tctcgcggcc catctcctgc accagaaagc ccagctgctt gccgatggcg ccgggtttcg
     2581 ccagcgcagc ctcggtggcg ccgaagtggg cccgcaaccg caccagctcc tcagtgatat
     2641 ccaaccgctc ggcgatgaac gcgagctcct gcgccatccg gccgtcgtcg accgggcgac
     2701 cttccagcag ctcggcaatc gacatccgca gccggtcgcg ctcgtgcacc atccgctcgg
     2761 gcgcccggga ctcgatgtcc cgggtcatgc gggccagctc ttccaggtgc tggcgcagct
     2821 cggaagccag cgcatcgcct tcgcgccgtc gcatggccct gcaatcggtg gcagcgtcgg
     2881 ccacgatcgg ctccacctcg gtccaggcca cggccggcgt ctcgttctca cccagcgtga
     2941 gcacatccat ctggcgggcc agcagctcca gggagatttc gcccgagaga ccgaccgcgg
     3001 tctgaagctc gcggagccgc gccatggctt cccgggcacg gtccacattg agctgcaggc
     3061 tgccgggtcc gtggctgccg ttcacccacc gcattgagac cgccacgtga ccccgttcga
     3121 actccttgcg cagccgttcc cggagatcga gctccagcgg cgccaggtcg gatgggagct
     3181 tgaaggcggg attgaagaac cggtggttga cggtgcggat ctccacccgg agatgcccgc
     3241 cggccaccgg tccttccgcc gccccgaacc ctgtcatgct gaagggcatg gccctcgtct
     3301 ctgcggggac acgtaaagcc ttgaatttta accggtcgcc gcgcctgagt cactagccgg
     3361 tgactgctcc ggcgtgggct cgcatacctt gacatcctac aacagaacca tactttgcca
     3421 ttgtagactg acaaggcatc aacgagctcc ctatggcccg caaagacccc gacctgctcc
     3481 agggcaccct cgatctgctg atcctcaaga ccctcgggct cgagccccag cacggctggg
     3541 ccatcgccaa acggatccag gcgatctcgc gggatgtgct gctgatcaac cagggctcgc
     3601 tctaccccgc gctttatcgc ctggaggatg aggacctgat cagcggcgag tggcgggtct
     3661 cggacgaggg ccgccggatc aaggtgtatc acctgaccgc cgcgggccgg gcccggctgg
     3721 tcagggagac caatacctgg cggctcttct cgggcgccgt cgacctgatc ctggcggccg
     3781 aacacccggg tggctcatga aatggtggcg taaagcggtc cgccggctgc gactgcttac
     3841 ggcccctcgg gcggtggaac gggatatgga cgacgagatc cggttccatc tgctcgaggc
     3901 gacccgtgag ctcgagagaa ccggtctctc gcccgtggcg gcgcggcgga gcgcgcgact
     3961 gtcgttcggt ggcgtcgaag ccaccaagga gcacgctcgc gacgcgcgcg gcggccgggt
     4021 gctgtccgat ctggtggcgg atgtccgcta tgcagtgctc cggaccgtac gagccccgct
     4081 tcattccggg tccgtcgtga tcctgctggg tgtcgccatc gccggcgtgg gtctctcgat
     4141 ggccctggca cgagcgtacc tcctccgtcc ccttcccttc cccgcaccgg agcggctggt
     4201 ctccgtgctc accgcgccga cccgggctcc tctgcccaac cctcccgatc tgagagcggt
     4261 cgactggacc agcgcagccc gtctgttcga aggcaccgtg gcctgggacc tcgacggatt
     4321 caccctcgtc ggcaacgggc cgccggaata cgtcgacggt tcctgggttt cccccggctt
     4381 cttcgagctc ctggcggtac ggccggccct gggccgggcc tttctcccca gcgagtacgt
     4441 ccccggatcc accgtggccc tgatcagcga tgggctgtgg cggcgccgct tcggtgccga
     4501 ctcccgggtg gtgggttcca cggtaagggc ccattccacc gaccggcccg atgaggacgc
     4561 gctgatcacg atcgtggggg tgctgccccc ggccgactgg caattgcatc gcttcaccga
     4621 catgctgcgt ccgttaggca cgccgcgcat gttctcgctg gcgcgtctgc cggccggcct
     4681 gaccccgacc gccgccgcgg cgaggctcac ggcggtggtc cgggagcagg tggcggtggg
     4741 cgattcgagc tggcgcatgt ccctggtgtc gactcaggac gagcacgtgt accagattcg
     4801 cccggtgctg catgtgctgc tcgccgcggc gctgctgctg ttgctcttgg cgcaggccag
     4861 cgccggggcg ttgctcctgg ctcggaccac cgcccggatc ggcgagctgg gcgttcgccg
     4921 ggcgctcggc gcaactcggg gccggctggc ccggcagttg gcggcggaag cggccctgct
     4981 gggcgccttg ggcttcgccc tgggggtcgg tctgaccccg gtgctggccg gcttcctgac
     5041 gcgcgggatg gaatcattcg gcgaggtgac ggttccgggt ggcgtcgatt cggtcggact
     5101 ggatccgctc gtcgtgctcg cggtcttcat cgtcacggcg gtgcctttcg gattcctggc
     5161 cttgctcccg ttgcagagtc tggcggcgcg agaaggaact cacgccctgt cgcgcatcac
     5221 gccgccccgg ggcgccaccc ggatgcgacg gctgctggcc accgtgcagg tcgtcgtagc
     5281 cgtggccctc ctgtcgcagg gagcgctgct gctacagagc gtccgggcca tgcttcgcgt
     5341 tgacctcggg ttcgagccgg agggattgct caaggctcat gtactcttgc cgcgaaccac
     5401 ctatcccgac ggtgatgcaa ggcggctcgc gatgaccagg atcctggacc gcatccgaca
     5461 ggtgcccggg gtggtcgacg ccgccagtgg gcacccccat cccttccgtc cggccccatt
     5521 cctcgcggtc gagtgcgacg gctgcgatcc tggcgccggt cgtccactgg cggtgccgac
     5581 cacggtgacg cccgggtact tcgccacgat gcggatcccg ctggtgacgg ggcggttgtt
     5641 cgaccagcgg gacctgcctg acggcgagcc agtgacggtc gtgagccggg cgttggccac
     5701 gaggctgtgg agcaccggag atgccgtggg ccggcggctc cggttaggaa acgtggactc
     5761 ccccggtccg tggctcaccg tcatcggcgt cgtgggcgag gtccgcaaga cgtatagcga
     5821 ttcgctttac cccgacctgt accgaccgtt cgcccaggcg cctcgcgcct atgccgcgct
     5881 gctggtgcgc accggggggg atccgttgcc gctgcaggac cagatccgac tggcggtggc
     5941 ggctgaggac gaatcgctgg ccctgtccga cgtggaaccg atgcgctcgc tgctgagcgc
     6001 gcggcgcggc cggcccggga tcctagcggc gttcgtggga ggcgtggccg tcgtggcgtt
     6061 cggtctcacc atctttgggc tccatgccgt ggtcgggtat ctggtgcggc tgcgacgccg
     6121 ggaattcgcg gtccgggtcg ccctgggagc caagccgggc cagatcgttt acgcggtgct
     6181 tgccgaggcg cgcccgatgc tgggactggg actcgccggc ggcgtggcgc tggcgtgggc
     6241 cacagtgggg ttgagccggg ccttcatcgt cggtatctcg cccaacgatc ccatgaccta
     6301 tgccggcgtc
//
LOCUS       DASWKS010000373         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2430454, whole genome shotgun sequence.
ACCESSION   DASWKS010000373 DASWKS010000000
VERSION     DASWKS010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2430454"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1670)
                     /locus_tag="VGA78_10650"
     CDS             complement(<1..1670)
                     /locus_tag="VGA78_10650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894375.1"
                     /translation="MGSGVAGIVLDTVGQSAYWYTDPIDPAEGETTAIGAGNYTLNMF
                     FGQLPEATASEQNPAAVDVVVTVSHTAPDGSGATTIVSSSTVTIDGHTPNPYAVSIGD
                     GDKQTFDTADPRRLRVQIEVGAVSGSGRFTLGHDSSSTPSSLATPAVVSPNPTLISLA
                     AAIFIPPVSSVLLRRRRLSTRLISVGLSMLLVLAVLSQSVVPASGAPDVFYLHNSAKS
                     GVTPAGKQMNVTQGTGASTLVFDTAGQDAYWYSELSYPTGTDNGGLAAGAYSLNLYFS
                     SLPAPGFPQVVKSTSSVNDTANTQHTVSLPSGIQSGNLLIVIFGHKGGTNETVTWPGG
                     WTQFLDANQVTNVGLKAAYRKADGTEGSTITVQTTNSVRSSHNSYRITGAEDPATQPP
                     ESAASNGNNANPNPASLTPTGGAKNYLWIAAEINNDGTNTITAYPASYSGGFQANGNA
                     SNSTTGSARRELNASSEDPGSFTLSASIAWAAGTIVVHPAAAPSVDIAVYAHHTATDG
                     SGETLITSATTTITNSTANPLALSLGSGSQQTFNSGNPRLLRAWVEVTG"
BASE COUNT          265 a          495 c          627 g          323 t
ORIGIN      
        1 ccagtcactt ccacccaagc gcgcagcagc cgcggattgc cggaattgaa ggtctgctgg
       61 gatccgctcc ccaggctgag ggccagcgga ttggcggtgc tgttggtgat ggtggtggtg
      121 gcgctggtga tcagggtctc cccggagccg tcggtagcgg tgtggtgcgc gtacacagcg
      181 atgtcgaccg aaggagccgc cgccggatgc accacgatag tgcctgcggc ccaggcgatc
      241 gaggcggaga gggtgaaact gccaggatcc tccgaggagg cattgagctc ccgccgggcc
      301 gagccggtgg tcgagttcga ggcattgccg ttggcctgga agccaccgga gtagctcgcc
      361 gggtaggccg tgatcgtgtt ggtgccgtcg ttgttgatct cggccgcgat ccacaggtag
      421 ttcttggccc cgccggtcgg ggtgaggctc gccggattcg gattggcatt gttgccattc
      481 gaggcggcgc tctcgggtgg ctgggtcgcg gggtcctccg ccccggtgat ccggtagctg
      541 ttgtgggagg acctgacgct gttcgtggtc tgtacggtga tggtcgagcc ttcggtgcca
      601 tctgctttcc ggtaggcggc cttcaggccg acgttcgtca cctggttggc atccaggaac
      661 tgagtccagc cgcccggcca ggtgactgtc tcattggtcc cgcctttgtg cccgaagatc
      721 acgatgagca ggttgccgga ctggattcca gagggaaggc tcacggtatg ttgggtgttg
      781 gcggtgtcgt tgaccgagct ggtgcttttg accacctggg ggaagcccgg cgccggcagc
      841 gagctgaaat acaggttgag gctgtaggcg ccggccgcga ggcccccgtt gtcggtcccg
      901 gtcgggtagc tcagctcgct ataccagtag gcgtcctgac cggcagtgtc aaataccagc
      961 gtcgaagccc ccgtcccctg ggtgacgttc atctgcttcc ccgcaggggt gacaccggac
     1021 ttggcgctgt tgtggaggta aaacacatcg ggggcgccgc tggcgggcac gacggactgg
     1081 gagagcacgg ccagcaccag cagcatagag aggccaacgc tgatcaagcg ggtggacagc
     1141 cggcggcgtc tgagcaggac cgaggacacc ggcgggatga agatggccgc ggccagcgaa
     1201 atgagggtcg ggttggggct caccacggcg ggcgttgcaa ggctgctcgg ggttgaggag
     1261 gagtcatggc caagggtgaa gcggccgctc ccactgactg cgccgacctc gatctgaacc
     1321 cgcagccgac gcggatccgc ggtgtcgaag gtctgtttgt ccccgtcgcc gatgctcacc
     1381 gcataagggt tgggtgtatg gccatcgatc gtaacggtcg aggaagacac gatggtggtc
     1441 gccccggaac cgtccggtgc ggtgtgcgag acggtgacga cgacgtcgac cgcggcgggg
     1501 ttttgctccg aggcggtagc ctccggcagc tggccgaaga acatgttgag ggtgtagttg
     1561 ccggccccga tggccgtggt ttcgccctca gcgggatcga tagggtcggt gtaccagtac
     1621 gcgctctgcc cgacggtgtc taacacgatc ccggccacac cacttcccat ggtcgggtcc
     1681 atctctttgc ccgccggcgt gatcccggat
//
LOCUS       DASWKS010000374         7260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1294667, whole genome shotgun sequence.
ACCESSION   DASWKS010000374 DASWKS010000000
VERSION     DASWKS010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294667"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VGA78_10655"
     CDS             complement(<1..225)
                     /locus_tag="VGA78_10655"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF012511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX9894376.1"
                     /translation="MTRYRQLFRRLEAEREGAFVPFLVLGDPDPGTSLELIRTLVSNG
                     ADALELGLPFSDPVADGPVIQAAATRALSRG"
     gene            complement(222..1421)
                     /gene="trpB"
                     /locus_tag="VGA78_10660"
     CDS             complement(222..1421)
                     /gene="trpB"
                     /locus_tag="VGA78_10660"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX9894377.1"
                     /translation="MKLAGYFGRFGGTFVPEILVPALEELEAAFLSASDDPVFQAEFQ
                     ALLRDYAGRPTPLYLCRNLVSETGSRLWLKREDLLHGGAHKTNQALGQGLLAKRVGKT
                     RLIAETGAGQHGVATALTGAVLGLETRVYMGTKDMERQKANVFRMQLMGAEVVPVDQG
                     SCTLKDAINEALRDWSASYETTHYLLGTVAGPHPFPLMVREYQRVIGREARAQYLERN
                     DRLPDVVVACVGGGSNAIGIFSDFIPDPEVRLLGVEPAGRGLDSGLHGATLLRGRPGV
                     LHGAYSMILQDDEGQIQETHSISAGLDYPGVGPEHACLHEIGRAEYVGCTDEDALDGF
                     RLLARAEGILPALESAHAIAVGVRLARGAARPMEILVNLSGRGDKDLETVLRHLGEGS
                     GEKGGGR"
     gene            complement(1418..2806)
                     /gene="trpCF"
                     /locus_tag="VGA78_10665"
     CDS             complement(1418..2806)
                     /gene="trpCF"
                     /locus_tag="VGA78_10665"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006945.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HEX9894378.1"
                     /translation="MVLDRILERTRADLARRTQQVPLDRLRSQIVPSDRSLFRALRGG
                     RTGFIMECKRASPSEGLIRELYDPASIAAEYAGHADAISVLTDGPFFQGALEHLRAVR
                     QAVSLPVLRKDFVLQPYQVVEARVWGADAILLMLSVLDDAAWSECAAAASEVGLESLT
                     EVHTDAELDRALHLGAPVIGINNRDLKTLTVDLDTVRRLAPRVPADRVLVCESGIGNH
                     RDVRSLRHLVDGFLVGTSLMRQRDLSRAVRQLVYGITKVCGLGREEDAQAAWRLGATH
                     GGLIFAPESPRRVDPARATAIRASAPLEWVGVFVNEAPEVIVDIVRRLGLSAVQLHGE
                     ETPELLDALRAAVPAGCEIWKAVRIRDHIPTPADTGADRLVLDTWREDRRGGTGARFD
                     WALLEGYPQLDRVLLGGGLTPETAAAADALGTGGLDVNSGVEISPGVKSAARLREFLE
                     ARRGSGRRGVTP"
     gene            complement(2796..3863)
                     /gene="trpD"
                     /locus_tag="VGA78_10670"
     CDS             complement(2796..3863)
                     /gene="trpD"
                     /locus_tag="VGA78_10670"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEX9894379.1"
                     /translation="MDRKRAGLATRDPRLVTPVHIALVLDTLSRRNLAREEAAAVFLH
                     LMEGRYSEVEIAALVSALKTRGESPEEIAGAAQALRSSARAFPRPDYAFADTCGTGGD
                     GLGTFNVSTAVALIAAELGIPVAKHGNRSVSSRCGSADVLEAAGVKLDAEPAVARRCL
                     DQAGVCFLFAPSYHAGVRHAAPVRKALGTRTIFNLLGPLANPSQPPLQLMGVYDPALC
                     LPLATTLGLLGAEAALVVHGAGLDEIALHGPTRGALWRHGRVTELELTPEEAGLSRRP
                     VEALAGGDPATNLELLRALLEGRGPAAHREAVALNAGALAWISGKAGTLGDGVALALT
                     AIEGGGGAERLVHWAELSHGA"
     gene            complement(3815..4438)
                     /locus_tag="VGA78_10675"
     CDS             complement(3815..4438)
                     /locus_tag="VGA78_10675"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEX9894380.1"
                     /translation="MTAPLHVVFIDNFDSFTFNLVDEFARRGASVEVWRNDVTASHAL
                     ARAEAAPGNRLLVLSPGPGTPRDAGCCIDLIRMAAGRVPVFGVCLGHQAIIEAFGGVV
                     ESAGVILHGRSSPVEHHGNPIFHNLPSPFVVGRYHSLASQALPDQLEGLAWTDRIVMA
                     VRHRRFPVLGIQFHPESVLTPQGGVLIDNVLQWTASARDSRPATPDS"
     gene            complement(4435..6093)
                     /locus_tag="VGA78_10680"
     CDS             complement(4435..6093)
                     /locus_tag="VGA78_10680"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:NF010079.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component 1"
                     /protein_id="HEX9894381.1"
                     /translation="MRGPTLAAGQILPLVRRLSGAPDPLALFASLTDGGQRTDTLLLE
                     SADAASGVGEKSLLLPRTSLRIEGRGRAVRIDPLTPNGQAMRDWLAGTLADRAQVTRD
                     GPALNLVFPAAPPGQDEQSRLTVPGPLDVLRAVTLWPVLVSEPAALAHLAAGIFAYDL
                     VDLLERLPAARADQLGFPDFVFWVPEQILILDHVHRATTIVAHVVGGGDSEASYHDAV
                     RAIESLARAVEQVGRKQGVGSREQDNATSLLPGPCSPSVQDTATFLLPGPCSPSVEVD
                     LDDAAFADLVQRLKGHIVAGDVFQIVPSRTFTLPCADPFEAYRRLRAANPSPYMFLVR
                     SPGWTLLGASPETAVKVSGTPLQVMLRPIAGTAARGRRADGSLDTELDARLQAALLTD
                     TKELAEHMMLVDLARNDVARVSRAGTRRVSRLLTVDRYQHVMHIVSEVEGELAPGLDA
                     LHAYAASMNMGTLVGAPKIRAAELLRHHEPSRRGPYGGAVGYLTHRGEMDTAIVIRSA
                     LVQHGVAHVRAGAGVVLDSDPVREADETRRKAASVLQALAGGGP"
     gene            complement(6090..7106)
                     /gene="aroF"
                     /locus_tag="VGA78_10685"
     CDS             complement(6090..7106)
                     /gene="aroF"
                     /locus_tag="VGA78_10685"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006421.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX9894382.1"
                     /translation="MIIVLRPEATKAHADELLARIESLGLRPLYMPGTERVVLGAIGD
                     ERVLERLHLESHPMVETVTHILAPYKLVSREMHPHDTIVEVGPVAIGGARFAVIAGPC
                     SVESAEQMRKSADAVKRGGAAALRGGAYKPRTSPYSFQGLGREGLQILREVADATGLP
                     AVTEVVEVADVELVERYADAFQCGARNMQNFRLLKALGQSRKPVVLKRGMAARVEDLL
                     LAAEYVLAEGNPNVILCERGIQTFETATRNTLDLNAIPLIKQKSHLPVIVDPSHGTGL
                     RELVPAMAKASAAAGADGLLLEVHHAPDQALSDGRQSLYPDQFETLMRELEPFVRAAG
                     KTLS"
BASE COUNT         1155 a         2553 c         2468 g         1084 t
ORIGIN      
        1 tccccgcgac agggcccgag tcgcggccgc ctgaatgacc ggaccatcag ccacgggatc
       61 actgaaggga aggcccagct ccaacgcgtc ggcgccgtta gacaccaggg tgcgaatcag
      121 ctcgaggctg gtccccggat cgggatcacc caataccaga aacggtacga aggccccttc
      181 gcgctctgcc tcaaggcgtc gaaacagctg ccggtaccgg gtcaacgccc gcctcccttc
      241 tccccactgc cctctcccag gtgtcgcagg acggtctcga gatccttgtc gcctcttccc
      301 gaaagattga ccagaatctc catcggccga gccgcgcccc gggccaaccg cacccctacc
      361 gcgatagcgt gggctgactc gagggccggc agaatccctt cggcccgcgc cagcaggcgg
      421 aacccatcca gcgcgtcttc atcggtgcag cctacatact ccgctcgccc gatctcatgc
      481 agacaggcgt gttccgggcc gacccccggg tagtcgagtc cggcggaaat cgagtgggtt
      541 tcctggatct gaccctcgtc gtcctggagg atcatggagt aggctccgtg cagcacgccc
      601 ggccgccccc ggagcagggt ggccccgtgc aatccgctgt cgaggcctcg cccggctggt
      661 tccactccca gcaaccgcac ctcggggtcg ggaatgaaat cgctgaagat gccgatggcg
      721 ttcgatcccc cgcccacgca ggcgacgacc acgtcaggca gacggtcgtt gcgctccagg
      781 tattgggccc gtgcttcccg cccgatgacc cgctggtact cgcgcaccat caagggaaac
      841 gggtgcgggc cggcgaccgt gcccagcagg tagtgggtgg tctcgtagct ggccgaccag
      901 tcacgcaggg cttcgttgat cgcgtccttg agcgtgcagg acccctgatc caccgggacc
      961 acctccgccc ccatgagctg catccggaag acattggctt tctgccgctc catgtccttg
     1021 gtacccatgt agacccgggt ctcgagtccc agcaccgcgc cggtcagggc ggtcgctacc
     1081 ccgtgctggc cggcgccggt ctcggcgatg agacgggtct tgccgacgcg tttcgccagt
     1141 agcccctggc ccagggcctg gttggtcttg tgagcgccgc cgtgcagcag atcctcccgc
     1201 ttgagccaga gccgcgaccc ggtttcgctc accaggttgc ggcagaggta gaggggcgtg
     1261 ggtcggccgg cgtagtcccg gagcagagcc tgaaactcgg cctgaaagac gggatcgtcc
     1321 gaggccgaca gaaaggcggc ttccagctct tccagtgcgg gcaccaggat ttccggcacg
     1381 aaggttccgc cgaatcgtcc gaagtagccg gccagcttca tggagtcact cctcgtctgc
     1441 cgctgccgcg ccgcgcctcc aggaactccc gaagccgggc cgccgatttc accccgggcg
     1501 agatttccac gcctgaattc acgtccagcc ccccggttcc cagcgcatcc gcggccgcgg
     1561 cggtctcggg agtgagtccg ccgcctaaca atacccggtc gagctgggga tacccctcga
     1621 gcaacgccca gtcgaaccgc gctccggtcc cgccccgccg gtcttctcgc caggtgtcca
     1681 gtaccagccg gtcggccccg gtgtccgccg gggtggggat gtggtcccgg attcggaccg
     1741 ccttccagat ctcgcaaccc gccgggacgg ctgcccgcag agcgtcaagc agttccggcg
     1801 tttcttcccc gtggagctgc acggcggaca ggcccagccg ccgaacgatg tccacgatga
     1861 cctccggcgc ttcgttgacg aagacgccga cccactcgag cggcgccgag gcccggatgg
     1921 cggtggctct ggcgggatcg acccggcggg gtgactcggg ggcgaagatg agcccgccgt
     1981 gggtggcgcc gaggcgccag gcggcctgtg cgtcctcttc ccggccgagg ccgcacacct
     2041 tggtgatccc gtagaccaac tggcggacgg cacgggacaa atcgcgttgc cgcatcaggg
     2101 acgtgccgac gagaaagccg tccaccaggt ggcgcaggga tcggacgtcg cggtgattcc
     2161 cgatgccgga ctcacagacc aggacccgat cggccggcac cctcggggcc aggcggcgca
     2221 ccgtatccag atcgaccgtg agcgtcttca gatcccggtt gttgatgccg atgaccggag
     2281 ctcccaggtg aagcgcgcgg tccagctccg cgtcggtatg gacctcggtc agcgattcaa
     2341 gtcccacttc gctggcggcg gcagcgcatt cgctccaggc ggcgtcatcc agcaccgaca
     2401 gcatcagcag gatcgcgtcc gccccccaga ctcgcgcttc aaccacctgg tagggctgca
     2461 gcacgaagtc tttccgcaac accgggagcg aaaccgcctg tcggaccgcc cgcaggtgct
     2521 cgagagcgcc ctggaagaag ggtccatcgg tcagcaccga gatggcgtcc gcgtggccgg
     2581 cgtactcggc cgcgatcgac gcggggtcgt agagctcgcg gatcaatccc tcggacggcg
     2641 aggcccgttt gcactccatg atgaagccgg tgcgtccccc gcgcagcgcg cggaacagcg
     2701 agcggtcgct gggaacgatc tgggaccgaa gccggtccag cggtacctgc tgggtgcgac
     2761 gcgccagatc ggcccgggtg cgctcgagga tccggtcaag caccatgaga gagctccgcc
     2821 cagtggacca ggcgctccgc cccgccgccg ccctcgatcg ccgtcagcgc cagcgccacg
     2881 ccgtcgccca acgtacccgc ctttcccgag atccaggcca gggcgccggc attgagcgcc
     2941 accgcttctc ggtgggccgc cggcccgcgg ccttcgagca gcgcacgcag cagctcgaga
     3001 ttggtcgcgg gatcgccgcc ggccagggcc tcgaccggcc ggcgggagag tccggcttct
     3061 tccggagtca actccagctc ggtgacccgg ccgtgacgcc agagggcgcc cctggtcggc
     3121 ccgtgcagcg cgatctcgtc caggccggcg ccatgcacca ccagcgcggc ttccgcgccc
     3181 agcaggccga gggtggtggc gagcggcagg cagagcgccg gatcgtagac gcccatgagc
     3241 tggagcggcg gctgactcgg attggccagc gggccgagca gattgaagat ggtgcgagtg
     3301 ccgagcgctt tccgtaccgg ggctgcgtgg cgcaccccgg cgtgatagga gggggcgaac
     3361 aggaagcaga ccccggcctg atccagacag cggcgtgcca ccgccggctc cgcgtcgagc
     3421 ttcacccccg cggcctcgag cacatcggcc gagccgcagc gggacgacac cgaccggttg
     3481 ccgtgcttcg ccactgggat gccgagctcc gcggcgatca gcgccacggc ggtcgacacg
     3541 ttgaaggttc ccagaccgtc tccaccggtg ccgcaggtgt cggcgaaggc atagtcgggg
     3601 cgggggaagg cccgggccga gctgcggagc gcctgggcgg ccccggcgat ctcctcgggc
     3661 gattcgcccc gggtcttgag cgccgagacc agcgcggcga tctcgacctc ggagtagcgg
     3721 ccctccatca gatgcaggaa gaccgccgcg gcctcctccc gcgccaggtt gcggcgactc
     3781 agggtatcca gcaccagagc gatgtgcacc ggcgtcacga gtcgggggtc gcgggtcgcg
     3841 agtcccgcgc gcttgcggtc cactgaagca cgttgtcgat cagcacacca ccctgcgggg
     3901 tcaggaccga ttcggggtgg aattggatcc cgaggaccgg gaaccggcga tgccgcaccg
     3961 ccatcacgat gcgatcggtc caggcgagac cctcgagctg gtccggcagt gcctggctgg
     4021 cgagcgagtg atagcgaccc accacaaacg gcgacggcag gttgtgaaag atcggatttc
     4081 cgtggtgctc caccggcgag ctgcgcccgt ggagaatgac gccggccgac tcgaccactc
     4141 cgccgaacgc ctcgatgatc gcctggtgtc ccaggcagac gccgaagacc gggacccggc
     4201 ccgcggccat ccgaatgaga tcgatgcagc agcccgcgtc gcgcggcgtt cccggcccgg
     4261 gggagagcac cagcaggcgg ttgccggggg cggcttcggc tcgcgccagg gcatgggacg
     4321 cggtcacgtc gttgcgccac acttccaccg acgcccccct ccgggcgaac tcgtccacca
     4381 ggttgaaggt gaacgagtcg aagttgtcga tgaacaccac gtgcaggggc gccgtcatgg
     4441 gccaccaccg gccagggcct gcagcaccga tgctgccttg cggcgggttt cgtcggcctc
     4501 ccgaaccgga tcggaatcca ggaccacgcc cgccccggcc cggacatggg ccacgccgtg
     4561 ctgcaccagg gccgagcgaa tgacgatcgc ggtgtccatt tcgccccgat gggtcaggta
     4621 gccgaccgca ccgccgtagg gtccccggcg gctgggttcg tggtgccgca gcagctcggc
     4681 ggcgcgaatc ttgggggcgc cgaccagggt acccatgttc atcgaggcgg cgtaggcgtg
     4741 cagcgcatcg agccccggtg ccagctcgcc ctcgacctcc gacacgatgt gcatcacgtg
     4801 ctgatagcga tcgaccgtga ggagccggga gacccggcgg gttccggctc ggctcacccg
     4861 ggcgacatcg ttgcgtgcca ggtccaccag catcatgtgc tcggccagct ccttggtatc
     4921 ggtgagcagc gccgcctgca gccgggcatc gagctcggtg tcgagcgagc catcggcccg
     4981 gcggccgcgc gccgcggtgc ccgcgatggg acgcagcatc acctggagcg gcgtgcccga
     5041 caccttgacc gccgtttcgg gggacgctcc cagcagggtc cagccgggcg atcgcaccag
     5101 gaacatgtag gggctgggat tggccgcccg cagccggcgg taggcctcga aggggtcggc
     5161 gcagggcagc gtgaaggtgc gggaagggac gatctgaaac acgtcgcccg ccacgatatg
     5221 tcccttcaac cgctggacca ggtccgcgaa agccgcgtcg tcgagatcca cctctaccga
     5281 cggggagcag ggaccaggaa gcaggaaggt agcggtatcc tgtaccgacg gggagcaggg
     5341 accaggaagc agggaggtgg cgttatcctg ctccctgctt cctactccct gcttcctgcc
     5401 gacctgttcc accgcccgag ccaggctttc gatcgcccgg accgcatcgt gatagctcgc
     5461 ttccgaatcg ccccctccca ccacgtgcgc gacgatggtc gtggcgcgat ggacatgatc
     5521 cagaatcagg atctgttccg gaacccagaa cacgaaatcc ggaaacccca gctggtccgc
     5581 acgcgcggcc ggcaaacgct ccagcagatc caccagatcg taggcaaaga tgccggccgc
     5641 caggtgggcc agggcggccg gctccgaaac caggaccggc cagagggtca ccgcccgcag
     5701 gacgtcgagc gggcccggga ccgtgagccg gctctgttca tcctggcccg gaggcgccgc
     5761 cggaaacacc agattcaggg cggggccgtc gcgagtgacc tgagcccggt cggccagcgt
     5821 cccagccagc cagtcacgca tggcctggcc gttgggggtc agaggatcga tgcgaaccgc
     5881 gcggccccgt ccctcgatcc gcagactggt gcggggcagc agcaggctct tttcgcccac
     5941 cccggaggcg gcgtcggccg attcgagtaa tagagtgtcg gtccgttgac cgccgtcggt
     6001 gagcgacgcg aacagggcca gcgggtcggg cgcgccgctc agccggcgta ccagcggcag
     6061 gatctggccg gccgcgaggg tcggtcctct cacgacaacg tcttccccgc cgcccgcacg
     6121 aagggctcca actcacgcat cagggtttcg aactggtcgg gatagagcga ctgccgtccg
     6181 tccgagagcg cctggtcggg ggcgtggtgc acctcgagca gcagcccgtc ggcgccggcc
     6241 gcggcggacg ccttggccat ggcaggcacc agttcgcgca acccggtgcc gtgcgaggga
     6301 tccacgatca cgggcagatg gctcttctgc ttgatgaggg ggatcgcgtt cagatccagg
     6361 gtattgcggg tggcggtctc gaaggtctgg atgccgcgct cgcacaggat gacattgggg
     6421 ttcccttccg ccaggacgta ctccgccgcc agcagcagat cttcgacccg tgccgccatg
     6481 ccgcgtttga ggaccaccgg cttccggctc tggcccaggg ccttgagcag ccggaagttc
     6541 tgcatgttgc gggcgccgca ctggaaggca tcggcgtagc gctccaccag ctccacgtcc
     6601 gccacctcga ccacctcggt caccgccggc aggccggtgg cgtcggcgac ttcccgcagg
     6661 atctgaagcc cttcccgccc cagtccctgg aaggagtagg ggctggttct gggcttgtag
     6721 gcgccgcccc gaagggcggc ggctccgccg cgcttgaccg catcggccga cttccgcatc
     6781 tgctcggcgc tctccaccga acagggcccg gcgatgaccg cgaatcgggc gccgccgatc
     6841 gccaccgggc cgacctccac gatggtgtcg tgggggtgca tctcccggct gaccagcttg
     6901 tagggcgcca ggatgtgggt gacggtctcg accatgggat ggctctcgag gtggagccgc
     6961 tcgaggaccc gctcatcccc gatcgcgccc agcacgaccc gttcggtgcc gggcatgtac
     7021 aagggccgca ggccgagcga ctcgatccga gccagcagct cgtcggcgtg ggctttggtc
     7081 gcctcaggtc ttaaaacgat gatcattctc ttcagggagc agggagcggg gagcagggag
     7141 caggagtagg gagccgggag cggggagcag ggagcagata aggctcggtt cgctcctgct
     7201 gcctcctccc ttctcccttc tcccttctcc ttgcttcctg ctccctgctc cctccttcct
//
LOCUS       DASWKS010000375         2068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3503792, whole genome shotgun sequence.
ACCESSION   DASWKS010000375 DASWKS010000000
VERSION     DASWKS010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3503792"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            417..857
                     /gene="merB"
                     /locus_tag="VGA78_10690"
     CDS             417..857
                     /gene="merB"
                     /locus_tag="VGA78_10690"
                     /EC_number="4.99.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF015216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018836 - alkylmercury lyase activity
                     [Evidence IEA];
                     GO_process: GO:0046413 - organomercury catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="organomercurial lyase"
                     /protein_id="HEX9894383.1"
                     /translation="MDHDAAVRSEVYRFLVEATRAPTVPEVGGALGLGQAEVREAYQR
                     LFIRRVLVLGEDGETILMAPPFSAVPTQHRVRVGSREYFANCAWDALGIPAALHAPAI
                     VTSRCEQSYEPLTIRVEGNGPEAVACVAHFAVPAARWWEDIVFT"
     gene            864..1103
                     /locus_tag="VGA78_10695"
     CDS             864..1103
                     /locus_tag="VGA78_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894384.1"
                     /translation="MLFFRSEERVDQWCRARELPRRPLITLTQLWQLAEAWYGTRLTP
                     EARRPAPAEMVEIFARVELTGPFWDPRADDFAAGT"
     gene            1164..1592
                     /locus_tag="VGA78_10700"
     CDS             1164..1592
                     /locus_tag="VGA78_10700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894385.1"
                     /translation="MVNAKMRDYDETTFLNVDLDIYSRSRLEPLVEAFGEQVLVHYVG
                     REGSRHSAHLALAESSDVADDMILSLVALVRSLPRSARQLWNRAQTREFNVGIQAGKR
                     PYSHELRLEPQTLEAVARVRGRIVITTYGATEYPPDPSHP"
     gene            1753..>2068
                     /locus_tag="VGA78_10705"
     CDS             1753..>2068
                     /locus_tag="VGA78_10705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894386.1"
                     /translation="MQNAVSEIDAARHDAITSAGAGFPFLCAFGLAWTAAAALSYAVS
                     AETTAWIYLLQGGPAVPLAFTIQKLMGYPRASRANPLLPLSLQLLFVQPVAFPVFLLV
                     LSF"
BASE COUNT          343 a          638 c          701 g          386 t
ORIGIN      
        1 gcgggcccga agctcgccgg aggtggtgac cactaccttg aactcgcccc gtctgacccg
       61 ggcgaccagg ggggagtcct cggtcgcggt atcgcgcgcc agcaaccagg cgctcgggat
      121 gacgagcaca atgacgatcg ccgcggcgat gaaccggcga ttcttgagga gacgcatgaa
      181 gcccccgtcg ggaacggacc tgacagctgt cggatcggcc ataatgagac gcccgtggcc
      241 ggcatttcgt tgccagcctg tggtttactg ggatggacta gtctcccgac gaaccggggc
      301 gagagaagtt tccaatgtgg gaggcgccgg gcggtaaggc aaacccggct cccgcgttag
      361 catgtaagcc gatggggtac agcgacttgt cgaccagact gacgggggaa ttgctcatgg
      421 accacgatgc cgctgtacgc agcgaggttt accggttcct ggtcgaggcc acccgggcgc
      481 ccaccgtgcc ggaggtgggt ggcgcgctgg gcctgggtca agccgaggtc cgggaggcct
      541 atcagcggct cttcatccga agggttctgg tgctgggtga agacggggag accatcctga
      601 tggccccgcc cttctccgct gttccgaccc agcaccgcgt gagggtgggg tcccgggagt
      661 acttcgccaa ctgtgcctgg gacgcgttag ggattccggc ggcgctgcac gcgccggcga
      721 tcgtgacttc acgatgcgaa cagagttacg aacctctgac aatccgggtc gaaggcaacg
      781 ggcccgaggc ggtggcgtgc gtcgcccatt tcgcggtgcc ggcggcgcgg tggtgggagg
      841 atatcgtctt cacctgacag accatgctct tcttccggtc ggaagaacgg gtggaccaat
      901 ggtgccgagc ccgggaattg ccgcgccggc cgctgatcac tttgacccag ctgtggcagt
      961 tggcggaggc atggtacggc acgcgattaa caccggaggc ccggcggccg gcgccggcgg
     1021 agatggtgga gatcttcgca cgagtggagc tcaccggacc gttctgggat ccgcgggctg
     1081 acgacttcgc agccgggaca tgaggtagat ccctcggttt gtgcggctgc cgccgcgact
     1141 gatatgttct tccagcgtgg acaatggtga acgccaagat gcgggactac gacgagacca
     1201 cgttcctgaa cgtcgatctc gacatctact cacgatcgag gctcgagccg ttggtcgaag
     1261 cctttggtga gcaggtcctg gtccactacg ttggtcgcga gggaagccgc cattccgctc
     1321 acctcgcgct ggcggagtct tccgatgtgg cggacgacat gattctgagc ctggtggcac
     1381 tggtccgaag tctcccgcgg tcagctcgac agctttggaa ccgggctcaa acccgggagt
     1441 tcaacgtcgg catccaggcg gggaagcggc catactcgca tgagctgcgc ctggagcctc
     1501 agacgctgga agcggtcgcc cgcgtcaggg gccgtatcgt catcaccacc tacggggcaa
     1561 ccgagtatcc gcccgatccg tcccatccgt agtatccggc tcaccctcca tccggggagc
     1621 ccgctgcact gaacggtgat cagggaccga ggttcagccg gatgcgtcgg attcaacgga
     1681 ttgggcggat caccttctta gtgaatccgg tcgcgctggt gaactcgcgg ggttgaagtg
     1741 caaggggagt cgatgcagaa cgccgtctcc gagattgatg ctgcccgcca tgatgccatc
     1801 acctcggcgg gcgccggctt tccgttcctg tgcgccttcg gactggcctg gaccgccgcc
     1861 gcagccctga gctacgccgt ttcggccgag accaccgcct ggatctacct gttgcagggg
     1921 gggccggccg tgccgctggc gttcacaatc cagaagttga tgggctatcc ccgggcctcg
     1981 cgcgccaatc ccctcctgcc cctgagtctc cagttgcttt ttgttcaacc ggtggcgttc
     2041 cccgtgttcc tgctggtgct gagtttct
//
LOCUS       DASWKS010000376         2156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3505345, whole genome shotgun sequence.
ACCESSION   DASWKS010000376 DASWKS010000000
VERSION     DASWKS010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3505345"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1404)
                     /gene="nrfD"
                     /locus_tag="VGA78_10710"
     CDS             complement(34..1404)
                     /gene="nrfD"
                     /locus_tag="VGA78_10710"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX9894387.1"
                     /translation="MAAVAPPHPVGHDGHVITQTHADVTRDVVGTLSAPTRGYVLLLL
                     GAVSLFLTGIVTFLVLVKDGLGHAGYQPPIFWSVYITTFVFWVGIGHAGTLISAILFL
                     FRSPWRTAVYRSTEVMTVFAIMTAGLFPIIHIGRQWIFYWLLPYPNSRFLWPNFKSPL
                     IWDVFAIGTYLTVSTTFLVFGLIPDVSAVRDKATGWRKKIYQLVSVGWKGTDNQWRHY
                     SRAYLYLAALATPLVLSVHSVVSWDFAVSIVPGWHGTIFAPYFVAGAIYSGIGMVLTL
                     IIPLRRALRIEHMIIPDYHFDNLAKLTLLTGSILFYAYATEYFVGWYSGNIFEQTTFY
                     RRAFGPYWWAGWTMITCNAFVSQLLWFRKVRTNLTSLFVISIFINIGMWFERFVIIVS
                     SLSNDYIPWAWDQLNPTWADWGILAGSFGWFGMWFLLFAKNFPIVAIQEIKEMIPMPR
                     KRGGQH"
     gene            complement(1408..>2156)
                     /locus_tag="VGA78_10715"
     CDS             complement(1408..>2156)
                     /locus_tag="VGA78_10715"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX9894388.1"
                     /translation="AAERGDYAKEHPQWGMSIDLARCTGCSACVTACYAENNIPTVGE
                     SEVLRGREMTWLRIERYWEDAKEPGAAPAARFIPMLCQHCGNAPCEPVCPVYAAYHTP
                     DGLNGQVYNRCVGTRYCANNCPYKVRYFNWYKYNEQAWPEPLHLQLNPDVTVRARGVM
                     EKCTFCIQRIRDTQNHARLEDRPIRDGEFTTACAQACPSDAIVFGNVKDGTGRVARIK
                     QDPRGYHVLEDLNVRPAVTYLAKVLLPAEA"
BASE COUNT          397 a          668 c          746 g          345 t
ORIGIN      
        1 gcctgggccc tgtggccttc ctcgtgaccg ccatcagtgc tgccctcccc gcttccgggg
       61 catcgggatc atctccttga tctcctggat cgccacgatg gggaagttct tggcgaagag
      121 caggaaccac atgccgaacc acccgaatga gcccgccagg atgccccagt ccgcccaggt
      181 cgggttgagc tggtcccagg cccaggggat gtagtcgttg ctgagcgacg acacgatgat
      241 gacgaagcgc tcgaaccaca tcccgatgtt gatgaagatc gagatgacga agagcgaggt
      301 cagattggtg cgcaccttcc ggaaccacag gagctgggac acgaacgcat tgcaggtgat
      361 catcgtccag ccggcccacc agtaggggcc gaacgcccgg cgatagaacg tcgtctgctc
      421 gaagatgttg ccgctgtacc acccgacgaa gtactccgtc gcgtaggcat agaacaggat
      481 cgagccggtc agcagcgtca gcttcgcgag attgtcgaag tggtaatccg ggatgatcat
      541 gtgctcgatg cggagcgccc gccggagcgg gatgatcagc gtgagcacca tgccgatgcc
      601 ggagtagatc gcgccggcca cgaagtaggg cgcgaagatg gtgccgtgcc accccgggac
      661 gatggagacg gcgaagtccc aggacaccac cgagtgcacc gagagcacca gcggggtggc
      721 cagggccgcg agatacaggt acgcccgcga gtagtgccgc cactggttgt cggtcccttt
      781 ccagccgacg gagaccagct ggtagatctt cttccgccac ccggtcgcct tgtcccgcac
      841 cgcggagacg tccgggatca ggccgaacac gaggaacgtg gtcgagaccg tgagataggt
      901 gccgatcgcg aagacgtccc agatcagcgg cgacttgaag ttgggccaga ggaagcgcga
      961 gttcggatag ggcagcagcc agtagaagat ccactggcgc ccgatgtgga tgatcgggaa
     1021 gagacccgcc gtcatgatgg cgaagaccgt catgacctcg gtggatcggt agaccgccgt
     1081 gcgccagggt gaccggaaga ggaacaggat cgccgagatg agcgtccccg cgtgtccgat
     1141 acccacccag aacacgaagg tcgtgatgta gacgctccag aagatcggcg gctggtatcc
     1201 ggcgtggccc aggccgtcct tgacgaggac caggaaggtc acgatgccgg tcaggaacag
     1261 cgacaccgcc ccgagcagca ggaggacgta gccccgggtg ggcgcgctca gcgtcccgac
     1321 cacgtcccgg gtgacgtcgg cgtgggtctg ggtgatcacg tgcccgtcgt gcccgacggg
     1381 atgcggaggg gcgacagcag ccatcggtta ggcctccgcc gggagcagga ccttggcgag
     1441 gtaggtgacc gccggccgca cgttgaggtc ctccaacacg tggtagccgc gggggtcctg
     1501 cttgatgcgg gccacccggc cggtgccgtc cttcacgttg ccgaacacga tcgcatccga
     1561 ggggcaggcc tgggcgcagg cggtggtgaa ctcgccatct ctgatgggac gatcctccag
     1621 ccgcgcgtgg ttctgggtgt cacggatgcg ctggatgcag aaggtgcact tctccatcac
     1681 gccgcgagcc cttacggtca cgtcgggatt gagctggaga tgcagcggct cgggccacgc
     1741 ctgctcgttg tacttgtacc agttgaagta ccgcaccttg tacgggcagt tgttggcgca
     1801 gtaccgggtg ccgacgcagc ggttgtagac ctgcccgttg agcccgtcgg gggtatggta
     1861 cgcggcgtac accgggcaga ccggctcgca cggcgcattg ccgcagtgct ggcagagcat
     1921 ggggatgaac cgcgcggccg gcgcggcgcc gggctctttc gcatcctccc agtaccgctc
     1981 gatccggagc caggtcatct cccggccgcg gagcacctcc gattcaccca cggtgggaat
     2041 gttgttctcc gcgtagcagg cggtcacgca ggcggagcag ccggtgcacc gggccaggtc
     2101 gatcgacatg ccccactgcg ggtgctcctt cgcgtagtcg ccgcgttcgg cggccc
//
LOCUS       DASWKS010000377         6347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2432713, whole genome shotgun sequence.
ACCESSION   DASWKS010000377 DASWKS010000000
VERSION     DASWKS010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2432713"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1017
                     /gene="mdh"
                     /locus_tag="VGA78_10720"
     CDS             85..1017
                     /gene="mdh"
                     /locus_tag="VGA78_10720"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX9894389.1"
                     /translation="MFNKITVVGAGNVGATAAQRLAEKNLARSIVMVDVVEGVPQGKA
                     LDQWQSGPVEGYDTRVLGTNDYDAAQGSELFVVTAGIARKPGMSRDDLVKTNAGIVKS
                     VSEQIKRVAPDSLVIVVSNPLDAMCYVAFKNTGFPRERVFGMAGVLDTARYRMFLGEA
                     LDVSVEDISAMVLGGHGDTMVPLVSYTTVSGIPVSQLIEPERLQAIVDRTRNGGAEIV
                     AHLKTGSAYYAPSAAAVQMVEAIVLDKKRVLPCSAWLQGEYGLKDVYCGVPVKLGRGG
                     LEQILKVTLTDAERTALHTSAEAVRSIQRVIDNG"
     gene            998..1735
                     /locus_tag="VGA78_10725"
     CDS             998..1735
                     /locus_tag="VGA78_10725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HEX9894390.1"
                     /translation="MSSTTADPVFRPGGSPPPDRSGPVIGRAGWLVMFYRTTIGKKVV
                     MALTGLVLVGYIVGHVSGNLLLFKGPDSINGYAELLKSSAVLLWTVRVLVFGSVVLHV
                     HAAYSLTRLNRSARPQRYDRTERRAATLSARSLRVGGVMLLLFLVFHILHFTTGTVHP
                     RFDVHDVYRNMVIGLRVPAVAAFYLVAMAALALHLHHGFWSLFQTLGWNHPQVNPMRR
                     RLATVLAVTVPLGFSVIVLAVFFGWVS"
     gene            1723..3654
                     /locus_tag="VGA78_10730"
     CDS             1723..3654
                     /locus_tag="VGA78_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HEX9894391.1"
                     /translation="MGELTPMELNPKTPGGPLESKWDHHRFGLRLVNPANRRKHRVIV
                     VGTGLAGASAAASLGEQGYNVLCFTFHDSPRRAHSIAAQGGINAAKNYQNDGDSIYRL
                     FYDTVKGGDFRAREANVYRLAQVSVNIIDQCVAQGVPFAREYGGLLANRSFGGAQVSR
                     TFYARGQTGQQLLLGAYSALERQVDRGTVTVIPRTEMLDLVVLEGRARGIVTRNLVTG
                     AIEAWAADAVLLATGGYGNVFYLSTNAKACNVTATYRAYKRGAAFGNPCFTQIHPTCI
                     PHSGDYQSKLTLMSESLRNDGRVWVPREKQDRRPAAEIPEGQRDYYLERKYPSFGNLA
                     PRDIASRAAKQVCDEGRGVGETGNGVYLDFADAIRRLGEPTIRERYGNLFEMYQRITG
                     ENPYQVPMRIFPAVHYTMGGLWVDYNLMSTVPGLHVLGEANFSDHGANRLGASALMQG
                     LADGYFIIPYTLGDYLATVRLDRVETDHPAFQRVTAEVSDRVGRLLAVNGSRSVDSFH
                     RELGRLMWDWCGMARNARGLGLALERIPALREEFWGNVRVLGQGEEFNQSLEKAGRVA
                     DYLEFAELLCRDALQREESCGGHFREEHQTEDGEALRDDARFAYVAAWEYAGEGRTPV
                     MHKEPLNFEYVQLATRSYK"
     gene            3899..4672
                     /locus_tag="VGA78_10735"
     CDS             3899..4672
                     /locus_tag="VGA78_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEX9894392.1"
                     /translation="MHLTLKVWRQAGPHAPGRFVTYDAPDVSPDMSFLEMLDVVNERL
                     TAQREAPIAFDHDCREGICGSCAMMVNGLAHGPLKGTTVCQLHMRHFADGDLLVVEPW
                     RAASFPVIRDLVVDRSAFDRIIQAGGYVSVSTGNAPEANAIPIAKGVVEQAMDAAQCI
                     GCGACVAACPNASAMLFTAAKVSHLGLLPQGQPERQRRALAMVRQMDAEGFGGCTNYG
                     ECQEACPKDISVENIARLNRDFVRAAILERAGAKAEATI"
     gene            4731..5864
                     /locus_tag="VGA78_10740"
     CDS             4731..5864
                     /locus_tag="VGA78_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894393.1"
                     /translation="MELRARAIPLLGFSDQVPDGGGLGELRIVQPLLAADLSLWRGRM
                     MLIGNFNLEGATIPGGELALGDWGEGFVDRRHPHTYLHELMAVVTSSPDRGWQVGGAL
                     GKGFVSFGTDDPMSRPPIRYPVNHHWAQVLERAVLLGQLRHRWVTVEGSLFNGDEPES
                     PDQWPKLDRLGDSWALRVSLTPLAGVEGQVSRARVESPEHRPGAGLEHRQWSASARLE
                     RRVAGRAVYGLVEWARTTVGPDIFRFSSVLGEGAIRLGRIRPYYRFERTERPEEERTS
                     AFRSRRPLLENSILGTSRWTTHTAGLGLERPGSGRWSLEPTLEATVGHIAKAGPGLFQ
                     VADWYDSPRFWSLTVGVRLELGRDPHRMGRYGVLATARGVHPH"
     gene            5861..>6347
                     /locus_tag="VGA78_10745"
     CDS             5861..>6347
                     /locus_tag="VGA78_10745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894394.1"
                     /translation="MRRRLGRWITVAVLAGAGCDDTVDGPGPVLPPPPPPGGAPPLAA
                     TVTVPPNYGIHDTFVRDGIAILCVWNTGIMILDVGGGGRGGTPTSPVTISTFAPSNGS
                     LASPAIHNAWWFRNPSGVKRYLFLGQEGPATLGASSSGDVKVLDLSNLAQPTEVAFYR
                     VV"
BASE COUNT         1001 a         2040 c         2219 g         1087 t
ORIGIN      
        1 gctccggact acatttccgc gttttcatga cgggcgtttc gcccgcccct ccgttcaccc
       61 gtctcacacc agagctttgg gaacatgttc aacaagatca cggtggtcgg ggcagggaat
      121 gtcggtgcca ccgccgccca acggctggcc gaaaagaacc tggcccggtc gatcgtgatg
      181 gtggacgttg tggaaggggt cccgcagggg aaggcactgg accagtggca atcgggcccg
      241 gtggaggggt acgacacccg ggtgctgggg accaacgact acgatgccgc ccagggctcc
      301 gagctgttcg tggtcaccgc agggatcgcg cgcaagcccg ggatgagccg ggatgacctg
      361 gtgaagacca atgccggcat cgtcaagtcg gtctcggagc agatcaagcg ggtcgcaccc
      421 gacagcctgg tcatcgtggt gagcaatccg ctggacgcga tgtgctacgt cgccttcaag
      481 aacaccggct ttccgcggga gcgggttttc ggcatggccg gtgtgctcga taccgcgcgt
      541 taccggatgt tcctgggtga agcgctggac gtgtcggtcg aagacatctc ggccatggtg
      601 ctgggcggcc acggcgacac catggtcccc ctggtctctt acaccacggt ctccggcatt
      661 cccgtctccc aactcatcga gccggagcgg ctccaggcga tcgtggatcg gacccgcaac
      721 ggcggcgcgg aaatcgtggc ccatctcaag accggctccg cctattatgc gcccagcgcg
      781 gccgcggtgc agatggtgga agccatcgtg ctcgacaaga agcgggtact tccgtgctcg
      841 gcatggttgc agggcgagta cggcctcaag gacgtctatt gcggggtccc ggtgaagctg
      901 gggcggggag gcctggagca gatcttgaag gtcactctga ccgatgccga gcggaccgcg
      961 ctccacacgt ccgcggaggc ggtgcggtcg atccaacgtg tcatcgacaa cggctgaccc
     1021 ggtcttccgg ccgggcggga gtccgccgcc ggaccgttcc gggccggtga tcggccgagc
     1081 cggttggctc gtgatgttct atcggacgac tatcggcaag aaggtggtca tggcgctcac
     1141 cggtctggta ctggtgggct acatcgtggg gcacgtcagc ggaaacctgc tcctgttcaa
     1201 ggggccggat tccatcaacg gctacgccga gctcctgaag agcagtgccg tgctgctgtg
     1261 gacggtccgg gtgctggtct tcggctcggt ggtcctgcac gtgcacgccg cctattcgtt
     1321 gacccggctc aaccgcagcg ctcggcccca gcgctacgac cggaccgagc gccgggcagc
     1381 gaccctctcg gcccggagtc ttcgggtggg cggcgtcatg cttctcctgt tcttggtctt
     1441 tcacatcctg catttcacga ccggcacggt tcacccgcgg tttgacgtgc atgacgtata
     1501 ccgcaacatg gtgatcgggc tccgggttcc cgcggtcgcg gccttctacc tggtggcgat
     1561 ggcggccctc gcgctccacc tgcaccacgg cttctggtcc ctgttccaga ccctggggtg
     1621 gaaccatccc caggtgaatc ccatgcgccg ccggctcgcg acggtgctgg cggtgacggt
     1681 tcccctgggt ttttccgtga tcgtgctggc ggtgttcttc gggtgggtga gctgaccccc
     1741 atggaactga atcccaagac cccgggcggc ccgctcgaga gcaagtggga tcatcaccgc
     1801 ttcgggctgc ggctggtgaa tccggccaac cgccgcaaac accgggtcat cgtggtggga
     1861 acgggcctgg ccggggcatc ggccgccgcc agcctgggcg agcagggcta caacgtgctc
     1921 tgcttcacct tccacgattc cccgcgccgg gcccacagca tcgccgcgca gggcggtatc
     1981 aacgcggcca agaactacca gaacgacggc gacagcatct accggctgtt ctacgacacg
     2041 gtgaaaggcg gcgatttccg ggcccgcgag gccaacgtct accggctggc ccaggtcagc
     2101 gtgaatatca tcgaccagtg cgtggcgcag ggggtgccgt tcgcgcgcga gtatggcggg
     2161 ctgctggcca accggagctt cggtggggcg caggtgtcgc gaaccttcta cgcccggggg
     2221 cagaccggcc agcaactgct gttaggcgct tacagcgcgc tggagcgcca ggtcgatcgg
     2281 gggacggtca ccgtcattcc gcggaccgag atgctggacc tggtggtgct cgagggccgg
     2341 gctcgcggga tcgtcacccg gaatctggtg accggcgcga tcgaggcgtg ggccgccgac
     2401 gcggtgctgc tggcgacggg cgggtacggc aacgtgttct acctgtccac caacgccaag
     2461 gcctgcaacg tcaccgccac ctaccgggcc tacaagcggg gcgccgcgtt cggcaacccc
     2521 tgcttcaccc agatccaccc cacctgcatc ccccacagcg gagactatca gtcgaagctg
     2581 accctgatgt cggagtcgtt gcgcaacgac ggccgggtgt gggtgccccg ggagaagcag
     2641 gaccggcggc ccgccgccga gatccccgag ggccagcggg actattacct ggagcggaag
     2701 taccccagct tcggcaacct ggctccgcgc gacattgcgt cgcgggccgc caagcaggtc
     2761 tgtgacgaag gccggggcgt gggggagacc ggcaacggcg tctacctcga ttttgccgat
     2821 gccatccggc ggctgggcga accgaccatc cgcgaacgtt acggcaacct gttcgaaatg
     2881 taccagcgga tcacgggcga gaacccctac caggtgccga tgcggatctt tccggcggtg
     2941 cattacacca tgggcggatt gtgggtcgac tacaacctga tgagcaccgt gccggggttg
     3001 cacgtgctgg gcgaggcgaa tttctccgac catggcgcca accggttggg cgcgagcgcg
     3061 ctgatgcagg gtctggccga cggctacttc atcattccct acactctggg cgactacctg
     3121 gcaacggtcc ggctggaccg ggttgagacc gatcatcccg cgtttcaacg ggtgaccgcg
     3181 gaggtgtcgg accgggtggg acggctgctg gcggtgaacg gcagccgctc ggtggattcc
     3241 tttcaccgcg agctgggtcg cctcatgtgg gactggtgcg gcatggcgcg caacgccagg
     3301 gggctggggc tggcgctgga gcggattccc gcgttgcggg aggagttctg gggcaacgtg
     3361 cgggtgctgg gccagggaga ggaattcaac caatcgctgg agaaggccgg acgggtggcc
     3421 gactatctgg agttcgccga gctgctctgc cgcgacgcgc tgcagcggga agagtcgtgc
     3481 gggggccatt tccgggagga acatcagacc gaggatggcg aggcgctgcg ggatgacgcc
     3541 cggttcgcgt atgtcgcggc ttgggagtat gcgggggagg ggcgaacgcc ggtcatgcac
     3601 aaggaaccgt tgaactttga atacgttcaa ctggcgacga ggtcttacaa atgaggttcc
     3661 ccgttccggg ttccgggttc caaggtgcgg tgctacgtgc ggtgcctcgt gccccgtgcc
     3721 gcgtgcgtcc tgagtccgcc gatcgctgcg agtcccggcc atccatgtac ggcggcacgt
     3781 ggcacataat ccggcaccgc acctcgcacc gcacgtggca cacggaacct ggaacctgga
     3841 acgccatgtc gcaccgcacg tggcacacgg aacccggaac cgggaactgt gtaaccccat
     3901 gcatctgacc ctgaaggtgt ggcgtcaggc cggcccccac gccccggggc gcttcgttac
     3961 ctatgatgcc cccgacgtca gtcccgacat gtcatttctc gagatgctgg atgtggtcaa
     4021 tgagcgcctc accgcacagc gcgaggcgcc catcgcgttc gaccacgatt gccgcgaggg
     4081 catctgcggc tcctgcgcca tgatggtgaa cggcctggcc cacggccccc tcaaggggac
     4141 cacggtgtgc cagctgcaca tgcggcactt cgcggacggt gatctgctgg tcgtcgaacc
     4201 gtggcgggct gcctcgttcc cggtgatccg ggacctggtg gtggaccggt cggcgttcga
     4261 ccggatcata caggccggtg ggtacgtgag cgtctccacc ggtaatgccc ccgaggccaa
     4321 tgccattccc atcgccaaag gggtggtgga gcaggcaatg gatgcggcgc agtgcatcgg
     4381 ctgcggcgcc tgcgtcgcgg cctgtcccaa tgcctccgcc atgctcttca ccgccgccaa
     4441 ggtgagccac ctggggctgt tgccgcaggg gcaaccggag cggcagcggc gggcgctggc
     4501 catggtgcga cagatggacg ccgagggatt cgggggctgc accaactacg gggagtgcca
     4561 ggaagcctgc cccaaggata tcagcgtcga aaacatcgcc cggctcaacc gcgatttcgt
     4621 gcgggccgcc atcctggagc gagccggagc aaaggccgag gccaccatct gaactcgacg
     4681 ctgcgtctgg ccgcggccgc gttgccgccg gccccgtctc gggtccgtct ttggaattgc
     4741 gggcccgcgc catcccgttg ctgggattca gtgatcaggt tcccgacggt ggcgggctgg
     4801 gggaactccg gatcgtgcag cccctgctgg ccgcggacct gtccctctgg cgcggccgga
     4861 tgatgctcat cggtaacttc aacctcgagg gggccactat ccccggcggg gagctggcac
     4921 tgggcgactg gggcgagggg ttcgtcgacc gccgccaccc ccatacctac ctgcacgagc
     4981 tgatggctgt ggtgacgtcg tcccccgatc gggggtggca ggtcggcggg gccctcggca
     5041 aagggttcgt cagcttcggt accgacgatc ccatgtcgcg gccaccgatc cgttatccgg
     5101 tgaatcatca ttgggcccag gtgctcgaac gcgccgtgct gctgggccag ctccgccacc
     5161 gctgggttac cgtggagggc tcgctgttca acggggacga gcccgagagc cccgatcagt
     5221 ggcccaagct ggatcgtctg ggcgattcct gggcgctgcg ggtgagcctc actccactcg
     5281 ccggggtgga aggccaggtc tcccgcgccc gggtcgaatc gccggaacac cggcccgggg
     5341 ccggattgga gcatcggcag tggagtgcgt cagcccggct ggagcgccga gtcgctggcc
     5401 gggcggtcta cggcctggtg gaatgggccc gcaccaccgt gggcccggac atcttccgat
     5461 tcagctcggt gctgggcgaa ggtgcgatcc ggctgggtcg cattcgtccg tattacaggt
     5521 tcgaacgaac cgaacggccg gaggaggagc gaacctccgc gtttcgctcc cggcggcctc
     5581 tgctcgagaa ctccattctt ggcaccagtc gctggactac ccacacggcc ggcctcggac
     5641 tggaacggcc cggatcgggg cgatggagtc tggaaccgac gctggaagcg accgtcgggc
     5701 acattgccaa ggccgggccc ggtctgttcc aggtggcgga ttggtacgac agccccaggt
     5761 tctggagtct gacggtagga gtccgtctgg agctcggccg ggacccgcac cggatgggac
     5821 ggtacggagt gctggccaca gcgaggggag tccacccgca ttgagacgac ggttgggacg
     5881 ctggatcacc gtggcggtgt tggccggggc ggggtgcgac gacaccgtcg acggccccgg
     5941 gccggtcttg ccgcctcccc cgcctcctgg cggcgcgccg ccattggcgg ccacggtgac
     6001 ggttccgcct aactacggga ttcacgacac cttcgtgcgt gacggcatcg cgatcctctg
     6061 tgtctggaac accgggatca tgatcctgga tgtcggcggc ggtgggcggg gtggcacgcc
     6121 gacctcgccc gtgaccatca gcaccttcgc gcccagcaac ggatcgctcg cgtcacccgc
     6181 gattcataac gcctggtggt tccgcaatcc ctcgggggtc aagcgctacc tgttcctggg
     6241 gcaggaagga ccggcgactc ttggcgccag ctcctcgggc gatgtgaagg tgctcgacct
     6301 gagcaacctg gcccagccga cggaggtcgc gttctaccgg gtggtcg
//
LOCUS       DASWKS010000378         6808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_577079, whole genome shotgun sequence.
ACCESSION   DASWKS010000378 DASWKS010000000
VERSION     DASWKS010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6808
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577079"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..504)
                     /locus_tag="VGA78_10750"
     CDS             complement(73..504)
                     /locus_tag="VGA78_10750"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX9894395.1"
                     /translation="MLSLPQTAEYALRAVCYIAEQEGDDPVPVRAIAQALRAPQNYLS
                     KTLHQLGGIGVLRSVRGAQGGYRLGMPAARLRLAAIVEPFLPVEEHRCIMGHIRCLED
                     APCGAHERWKEVKDTTRAFFAELTMADLLAAGGRVNGPCGT"
     gene            complement(513..1520)
                     /locus_tag="VGA78_10755"
     CDS             complement(513..1520)
                     /locus_tag="VGA78_10755"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX9894396.1"
                     /translation="MRKLSVAAVTLLAVGGVAVLTAGGKRTRIERIDYGTTRTAVTPA
                     FDARVAPASTAAVKEFRIPMTHDTLEIAKGVKYIGWTFGGTVPGPVIRVREGDLVRIN
                     LVNQARDMPHSIDFHASKIPMNHAMKSIAPGDSLQFEFVATTPGTFMVHCGTSPVLMH
                     IAQGMYLPMIVDPKGGWPTEADKEFVVVQSDFYPKGSVGDSTVQEADWEAMLQAAPTY
                     VVFNGRAFQYQAAPLQVDEGDRVRLFVMNAGPNVRSDFHVVGNIFDRVYPGGNPDQMI
                     QGVQTYMVPSGGGAVMELEFKKGYSGVGTYAFVTHAFADASKGAVGLIQVGHPTTMVS
                     H"
     gene            1725..3404
                     /locus_tag="VGA78_10760"
     CDS             1725..3404
                     /locus_tag="VGA78_10760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894397.1"
                     /translation="MSGLVTALALTALQAGTSPAGPDSVELHRAMIAAQRRFEFARRR
                     LLPISTAGTGRCDERVGRFCYWYDPEEPPPPEEPMSIREERERFLSRLADAAEQLPGD
                     EWILAQRVRYLVEHGANDSAATIARGCDTWWCEALEGFALHVKGDVAGSEQSFTAMLS
                     QMPSEERCRWNDLELVLEPDDREPYQRLDCGQRDSANAVLFWRATPLFARGGNDTRTE
                     WYARQVLVRALDRAITHHGMRLGGDLREILIRYGWATAYGRRPNPYGGFEEVDVVGHE
                     PKPAYPFLGFDSRGRWPPEPDRPRARFAPVFASLIAPLDDVQLARFRRDDSVIVVAGF
                     RAGRDTLFRAPQLEITLAFSAGPDVPVRVRRQRIADREGGLMVAGSSLTGSVSLELAD
                     SVHRSWAVHRVHYLEAPEGMSDLLLTRTRDELPGSLSEAAEAAWPGSRLEQGSTVGLY
                     WESYGHAAGDSLLQVGLTVEPVRPGFLGRVGQSLGLRRRVPPLRLAWSQRQEGTTAVT
                     GHAVEVDLSRLAPGSYLLLVEMGGDRRAGRSIEIVRASRVVSREPAGAERR"
     gene            3753..3826
                     /locus_tag="VGA78_10765"
     tRNA            3753..3826
                     /locus_tag="VGA78_10765"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3787..3789,aa:Val,seq:cac)
     gene            complement(3857..6619)
                     /locus_tag="VGA78_10770"
     CDS             complement(3857..6619)
                     /locus_tag="VGA78_10770"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894398.1"
                     /translation="MPSQDDSLPGRLDRLEVTRLARAEGLPESLAEHIAGVVTATGLP
                     EDRRAEVFRELVAHFQDGLEAGRSPEELLAASGQAAKVGRLIRDHKRVVTPESQGGSG
                     PRDPILLQLVRDVRYAARRLLARPGFTATALLSLALGIGANAAMFTLVNDLILRKPSL
                     PEPERLVEIYMTGTIGPFNTLSYPDLEDVARSTTDVFSGVGGTRLFIVSRGDGDAPEQ
                     VVIEEVTANFFEILGLRPGLGRLIEPADAPAPGTGTVVVLTDAYWRRAFGGDPAVVGR
                     TIRLTGISYTIIGVAPRDYPSSLRGIGIDLFVPVTMARQLDPSATDDLTDRDNQSTFA
                     KARLRPGVTQEQARVALASVAADFASRRVGIWREGDGFTLIPWSDVIIWPPIDRVLVP
                     VAWMLMVVVGLVLVIACANLAGFLLARAVDRRKEIAVRLALGATRGQLISQLLVETVL
                     MALLAGLLGVGLARTALRLVLAADLPLPLPISFGLALDWRVLGFSVGMSILAGVLFGL
                     APAIQSTRFDLASVIRDETGGGGRVRGRLRQALVAGQVAVSMVLLVAAGLFVRSLDAA
                     RSTDPGFGGRPAAMVWLGIPRDRNPLQTVERLEQRIGELPGVVAVGAMDHLHLNPLSI
                     SSMFLNIDGVPSPPGREGYDVDKVAADTGFITAAGFRLLRGRAFTATDQVGTPPVAIV
                     NQAFAERFWPGREAVGRQFRGADSAQAFQVVGVVNTAKIRNLAEDPRPAVYFALAQSA
                     PSAVWLIAQTSGDADQLLPRMLGAVREIDPELFVFQSRTLARHLDAMSLPIKLGALAL
                     AAFAGLALVMASIGLYGTVSYAVSQRTREVGIRLSLGADRSAVVALLLRSGLRLVLIG
                     VAVGLVLSLALAQLLQRLLFGVKAMDPLTFVAVPAVLLAVAFLAAWIPARRAGRVDPL
                     AALKAE"
     gene            complement(6623..>6808)
                     /locus_tag="VGA78_10775"
     CDS             complement(6623..>6808)
                     /locus_tag="VGA78_10775"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9894399.1"
                     /translation="SLEAKKLVASRWVETPSGRKRRYYRLTSQGAAWLGQRRAQWREL
                     FEAMIDIGVVAPAPRGG"
BASE COUNT         1140 a         2311 c         2268 g         1089 t
ORIGIN      
        1 cgggcttcgt cggccatggg cagagtcttg tgaaaggatg ggaaatgaat tgtggcgccg
       61 tcggtcgtgg gttcaagtcc cacagggccc attcaccctc ccgccggcgg ccagcaagtc
      121 ggccatggtc agctcggcga agaacgcccg cgtggtgtcc ttcacttcct tccatcgctc
      181 gtgcgcaccg cagggcgcat cctcgagaca ccggatgtga cccatgatgc agcgatgttc
      241 ctcgaccgga aggaagggct cgacgatggc ggccagacgc agccgcgcgg cgggcatccc
      301 cagtcgatac cctccctgcg ccccgcgcac cgaccgaagc acgccgatgc cacccagttg
      361 atgcagggtc ttggagagat agttctgcgg cgccctgagc gcctgggcga tcgcccggac
      421 cggcacgggg tcgtcgcctt cctgctcggc gatgtagcag accgctcgca gggcgtactc
      481 ggccgtctgg gggagcgaga gcatgttccc gcctagtgcg acaccatcgt ggtgggatgg
      541 ccaacctgga tcagacccac ggcgcccttg ctggcgtcgg cgaaggcgtg ggtgacgaag
      601 gcataggttc cgaccccgct gtaacccttc ttgaactcga gctccatcac tgccccacca
      661 ccgctgggga ccatgtaggt ctgcactccc tggatcatct gatcggggtt gccgccggga
      721 tacacgcggt cgaagatgtt accgacgacg tggaaatcgc tccgcacgtt cggccccgcg
      781 ttcatgacga acaaccggac ccggtcgcct tcgtcgacct gcagaggagc ggcctggtac
      841 tgaaacgccc ggccattgaa gaccacgtag gtcggagccg cctgcagcat cgcctcccaa
      901 tcggcttcct gcacggtgct gtcgccgacc gaccccttgg gatagaagtc actctggacc
      961 accacgaact ccttgtcggc ctccgtcggc catccgccct tcggatccac gatcatcggc
     1021 aggtacatcc cctgggcgat atgcatcagc accggggaag tcccgcaatg caccatgaag
     1081 gtcccagggg tcgtggccac gaactcgaac tggaggctgt cgcccggcgc gatggacttc
     1141 atcgcgtggt tcatggggat cttcgaagcg tggaagtcga tcgagtgcgg catgtccctg
     1201 gcctggttta ccaggttgat ccggaccagg tcgccttcgc gaacccggat aaccggtccg
     1261 ggaaccgtgc caccgaaggt ccagccgatg tacttcacac cctttgcgat ctcgagagtg
     1321 tcgtgggtca tcggaatcct gaattccttc accgcggccg tggaggcggg cgcgacccga
     1381 gcgtcgaatg cgggggtgac cgcggtccgg gttgtgccat agtcgatccg ctcgattcgg
     1441 gtccgcttcc cgcctgcggt caggacggcg accccgccta cagccagtag ggtcaccgcg
     1501 gctacgctca gctttctcat cgtcgggctc ctgggtccag cgcttcccgc actggtcagg
     1561 cgtcggcttc cggcagacgc ccatcgtctg agcaacagga taccggtcgg cttcctaaac
     1621 cggcgttaaa gaccgatgaa acaatcttca cctccggatg aagattccgg cccggtatcc
     1681 aggcgcgctt gcccagcccc ctcggcaggc tttccttaag acccatgtcc gggctggtca
     1741 cggccctcgc gctcaccgcg cttcaggcgg gtacctcacc cgccgggccc gactccgtcg
     1801 agctgcatcg cgcgatgatc gcggcccaac gacgcttcga gttcgcccgc cgccggctct
     1861 tgccgatcag caccgccggg accggccgct gcgacgaacg ggtgggccgg ttctgctact
     1921 ggtacgaccc ggaggaacct cctcccccgg aagaaccgat gagtatccgg gaggaacggg
     1981 agcggttcct ctcccggctg gccgacgcgg cagagcagct ccccggcgac gagtggatcc
     2041 tggcgcagcg ggtgcgctac ctggtggagc acggagcgaa cgattccgcg gcgacgattg
     2101 cccgaggctg cgatacctgg tggtgcgagg cgctggaggg tttcgcgttg cacgtgaagg
     2161 gcgacgtggc cggctcggag cagtcgttta ccgcgatgct gtcgcagatg ccgtcggagg
     2221 aacgctgccg gtggaacgac ctggagctcg tgctcgagcc agacgacagg gaaccatacc
     2281 agaggctcga ctgcggccag cgcgattccg ccaatgccgt gctgttctgg cgggccacac
     2341 cgctgttcgc tcgcgggggc aacgacactc gcaccgagtg gtacgcccgc caggtgctgg
     2401 ttcgcgccct cgatcgggcc atcacgcatc acggcatgcg tctgggcggt gatctgcggg
     2461 aaatactgat ccggtatggt tgggcgacgg catatggccg gcggcccaat ccctatggcg
     2521 gcttcgaaga ggtcgatgtc gtggggcacg agcccaagcc ggcctatccc tttcttggtt
     2581 ttgatagtcg agggcgttgg cccccggagc ccgatcggcc gcgggcccgg ttcgctcccg
     2641 tgttcgccag tctcatcgcg cccctcgacg atgtccagct ggcccggttt cggcgcgacg
     2701 attccgtcat cgtggtcgcg ggctttcgag ccgggcgcga taccctgttc cgcgctccgc
     2761 agctcgaaat cacgctcgcg ttcagcgccg gtccggacgt tccggtccgg gtccggcgcc
     2821 agcggattgc cgaccgggag ggcgggctga tggtcgcggg atcttccctc acgggatcgg
     2881 tgagcctcga gctggcggat tcggtccatc gctcctgggc ggtccatcgg gtgcattacc
     2941 tcgaagcacc cgagggcatg tccgatctgc ttttgactcg aactcgggat gagttgcccg
     3001 ggtcgctgtc ggaagcggcc gaggccgcct ggccgggttc gcggctggaa caggggagca
     3061 cggtgggtct ctactgggag agttacggtc acgcggccgg cgactcgtta ctccaggtcg
     3121 gactgacagt cgagccggtc agacccgggt tcctcggccg ggtcggtcag tcgttgggcc
     3181 tgcgtcgccg ggtgccgccg cttcgcctgg catggtcgca gcggcaggag gggactaccg
     3241 ccgtcaccgg ccacgccgtc gaggtcgatc tgtcacggct cgctccggga tcctatctct
     3301 tgctggtgga gatgggcggg gatcgccgcg cggggaggag catcgagatc gtgcgggcga
     3361 gcagagtggt gtcacgggaa cctgctggcg ccgagcgacg ttgagaaggg agcgtgcgac
     3421 agacaaaagc ccgatagtgg cgcgatcgca acatcacgcg actggctgga ttttgaggat
     3481 tgcgcgctaa ccggtgcctt gacaatgggt tgggtttgca ccccagggtg ctaacaccac
     3541 ggcatgttga gtgcgctgga tcacaaacgg catcgctggc cggcctcact gcatggagca
     3601 ctcataagct cccttggggt tcggttggcg agccgagaac cagcgcggac tccccccgac
     3661 gctggcctga ctagtgacga tcggccccgg cgcgcaagcg ttcggggtcg gttgctttgg
     3721 gggtgatggc tcgttacact ccgcggcctt ccgggcgatt agctcagctg gttagagcgc
     3781 gcgcctcaca tgcgcgaggt cgggggttca agtccctcat cgcccatcgc agtccccacc
     3841 ctcagatcgc tccactctac tccgccttca gtgctgccag cgggtccact cgtccggccc
     3901 tccgcgcggg gatccacgcc gccagaaacg ccaccgccag cagcaccgct ggtaccgcga
     3961 cgaacgtcag cgggtccatc gccttgacgc cgaacagcaa gcgctgcagc agctgcgcca
     4021 gggcgaggga aagcaccagc cccacagcga cgccgatcag gaccagccgg agcccgctcc
     4081 ggagcagcaa ggccaccacc gccgagcggt ccgcgcccag cgacaaacgg atgcccacct
     4141 cgcgggtccg ttgcgacacg gcatagctca cggtgccata gagtccgatg gaggccatca
     4201 cgagcgcgag ccccgcgaac gcggccaggg ccagggcacc gagcttgatc ggcagggaca
     4261 tcgcatcgag gtgacgggcc agagtgcggc tctggaacac aaacaactcg ggatcgatct
     4321 ctcgaaccgc cccgagcatc cgcgggagca gctggtccgc gtctccgctg gtctgggcga
     4381 tcaaccacac cgcggacggg gcggactggg ccagggcgaa atacacggcg gggcggggat
     4441 cctcggcgag attcctgatc ttcgccgtgt tcaccacgcc caccacctgg aatgcctggg
     4501 cgctgtcagc cccccggaat tgtcggccca ccgcctcgcg tccgggccag aaccgctcgg
     4561 cgaaggcctg gttgacgatc gccaccggtg gggtgccgac ctgatcggtg gcggtgaagg
     4621 cccgtccccg cagcaatcgg aaccccgctg cagtaatgaa gccggtgtcg gcggccacct
     4681 tgtccacgtc atatccctcc cgtccgggcg gggatgggac gccatcgatg ttgaggaaca
     4741 tcgagctgat gctgagcggg ttgagatgca ggtggtccat tgccccgacg gcgaccacac
     4801 cggggagctc gccgatgcgc tgctccaggc gctcgaccgt ctggagcggg ttccgatctc
     4861 gggggatccc cagccagacc attgccgcag gcctgccgcc gaagccggga tcggtgcttc
     4921 gggccgcatc caggctccgg acaaagaggc cggccgccac cagcagcacc atggagaccg
     4981 ccacttgccc cgccaccagg gcctggcgca gccggccccg cacccggccg ccgccgccgg
     5041 tctcgtcgcg gatgaccgat gccaggtcga accgggtgga ctgaatcgcc ggggccaggc
     5101 cgaagagaac cccggccaga atcgacatcc ccactgagaa gcccaggacc cgccagtcga
     5161 gggccaggcc aaagctgatg ggaaggggga gcggcagatc ggcggcgagc accaggcgca
     5221 acgcggtccg ggccaacccg acgcctaaca gcccggcgag gagcgccatg aggacggttt
     5281 cgaccagcaa ctgcgaaatc agctgaccgc gagtggcccc cagcgccagg cgtacggcga
     5341 tctccttgcg ccggtcgacc gcacgggcca ggagaaaccc agccagattg gcgcaggcga
     5401 tcaccagcac cagccccacc accaccatca gcatccaggc gaccggcacc agcacccggt
     5461 cgatcggggg ccagatgatc acatcggacc acgggatgag ggtgaagccg tctccttcgc
     5521 gccagatccc cactcgtcgg gaggcgaaat ccgccgccac gctcgccagc gccacccgag
     5581 cctgctcctg agtcacgccg ggccggagcc gggccttggc gaacgtgctc tggttgtctc
     5641 gatcggtcag atcgtcggtt gcgctgggat cgagctgccg ggccatggtc accggaacga
     5701 acagatcgat gccgatgccg cggagcgagc tggggtaatc ccggggcgcc accccgatga
     5761 tggtgtagga aataccggtc agccggatgg tgcgtcctac cacggccgga tcacccccga
     5821 acgcccgccg ccagtaggcg tcggtgagga ccaccactgt tccggttccc ggggccggag
     5881 catcggccgg ctcgatcagc cggcccaatc cgggccggag ccccagtatc tcgaagaagt
     5941 ttgcggtcac ctcttcgatg acgacttgct cgggtgcgtc cccgtctccc cgggaaacga
     6001 tgaacaatcg ggtgcctccg accccggaaa agacatccgt ggtgctgcgg gcaacatcct
     6061 ccaggtccgg ataggacagg gtattgaatg gtccgatcgt ccccgtcatg tagatctcaa
     6121 ccagccgctc gggttccggg agcgacggct tacggagaat gagatcgttg accagcgtga
     6181 acatcgccgc gttggcaccg atccccaggg cgagcgatag cagcgcggtg gcggtgaatc
     6241 cggggcgggc cagcaagcga cgggcggcgt agcggacatc acggaccagc tgaagcagga
     6301 tcgggtcgcg cggtccactg ccgccctgcg actccggggt tactacccgc ttatggtccc
     6361 ggatgagccg gccgaccttt gcggcctggc ccgacgcggc cagcaattcc tccggggaac
     6421 ggccggcctc gaggccgtcc tgaaagtggg ccaccagctc gcggaacacc tcggcgcgac
     6481 ggtcctccgg cagccccgtc gcggtcacca ctccggcgat atgctccgcc agactctccg
     6541 gcagtccttc ggctcgagcc aggcgcgtga cttcgagacg atcgagccgg cccgggagcg
     6601 agtcatcctg cgaaggcatg cctcaccctc cccgcggagc cggcgccacc acgccgatgt
     6661 cgatcatggc ctcgaacagc tcccgccact gcgcccgacg ctggccgagc caggcggcgc
     6721 cctgcgaggt gagccggtaa tagcggcgtt tgcggccgga gggcgtctcg acccagcggc
     6781 tcgcgaccag cttcttggct tccagact
//
LOCUS       DASWKS010000379         6896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3170345, whole genome shotgun sequence.
ACCESSION   DASWKS010000379 DASWKS010000000
VERSION     DASWKS010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6896
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3170345"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VGA78_10780"
     CDS             complement(<1..953)
                     /locus_tag="VGA78_10780"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9894400.1"
                     /translation="MTARAQPGPRLPDAREGRGRSTRRGEGDAKPKVTLRSAWRESKE
                     LIVRHRRRLAIGMVLMLVSRLAGLVLPGSSKYLIDHVIIGQQYQMLVPLALAAFGASV
                     IQAGSGFALSQLLGVAAQRAVTDMRRQVEAHVLRLPVRHFDSTQTGILISRIMTDAEG
                     IRNLVGSGLVQLVGGIVTAIIALGVLFWLNWQLTAGTLLFLGAFGWGMSFAFVKLRPI
                     FRERSKINAAVTGRLTESLSGIRVVKAYVAERREDLTFARGVHKLFRNIATTITGVSA
                     LGNLTTVVVGGIGALMMIMGGRAVAAGTMTLGDLMMYVLFTG"
     gene            complement(1073..4213)
                     /locus_tag="VGA78_10785"
     CDS             complement(1073..4213)
                     /locus_tag="VGA78_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9894401.1"
                     /translation="MVISDFAIKRPIITIVVMLALVIFGTFAAFTLKTDEFPEVAPPF
                     VTVAIPYPGGSPETVEKEVMDPVEEAISSISGVEKITGRAEDGIAFIMVEFVFEKELT
                     EATQDVRDAISGIRNDLPTEMEEPVIRKFNQTDYPIVSLALSSDALSTRELTRLADPG
                     ITRELRSLTGVAEVTISGKRERELTVELRPEALQGARISVTEVVQAVQLQNLAAPIGR
                     VETELEERSIRLRGRLAGPEEFAQLVVSERGGRLIRLGDIAEVKDGAEEQRTLALFNG
                     KEAVGIDLKKATGYSTTDVAQRIMLRIDEVRTRMPANVRLDVVRDAGKRVEDSVGNVE
                     EALVLGAILTVLVVFLFLNSWRSTVITGLALPVSVLASFIAVLAFGFTLNMMSLLGLS
                     LAIGILIDDAIVVRENIVRHVEMGKDHFTAAHDGTDEIGLAVTATTFSILAVFIPVAF
                     LTGESGQWFKPFALTIACSVLVSLLVSFSLDPMLSAYWADPHVAPEKRVWITRLLDRF
                     NAWFNRRAQGYKKVIAWALDHRWAVVAIAVTSFGFALAMPALRLVGVGFVPEDDRSEV
                     FVILETPPGSNLEYMRRRADEVLAIASKVSEVTYSYTTLGGGLTGAVDEGTIMFKLTP
                     KSERDRSVQEIAAALRPELNRLAGVRIAVRDSDWGGNMKLLQLDVRGEDVGTIQRVAE
                     QVAAEAMQVPNAVDVGLSTKGQRPEVTVDIDRGLAGSLGITVGQVAQSLRPAFAGLDA
                     GDWIDPSGETRDVMVRLSPQARTSPNDLRQLPLVMLGADGVPTTVPLGQVARIDQALG
                     PAVINHLNRDPVVTVGWNISGRSTGEVMTDVKARVARLNIPDGVSVTEGGQAEQQTEI
                     FTRIFQALALAVLLMYLVLAMQFGSFTDPLAIMLSLPLSLIGVMLALGLSGHTVNIMS
                     LIGVILLMGIVAKNAILLIDFAKWAHERDGLPLREALIEAGAIRLRPILMTTFALIAG
                     MLPVALGRGEGAAFRAPLGVAVIGGVITSTLLTLVAIPTFYEILIESRSWLGIRVRRI
                     FRSTRRGVEPALEQQD"
     gene            complement(4221..5312)
                     /locus_tag="VGA78_10790"
     CDS             complement(4221..5312)
                     /locus_tag="VGA78_10790"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9894402.1"
                     /translation="MSFDRIALLTVAGAAAFTSACGNRSKAESAPEAVAVTVSPDNIK
                     VLDSVELQSGPAISGDLSPERAATIRAEVGASVRTVKVEEGQRVRPGQLLATLDETAI
                     AERYRSAKSRVTATENSAAVARREAERAKRLLQGGAVAERDVELAERARWTAEAELDD
                     AKAALASAEREWQRTQLRAPIAGIVSMRKVSVGDVVQVGDQLFEVVDPASMQLEAAVP
                     VSALGALKVGSEVEFEVSGYEGQKFTGRIKRINPAVDPGTRQVRIVVSIPNAGSLVAG
                     LFAKGRVDTETKIAVAVPLDAVDQRGAAPTVRRIKEGRVEVVAVQLGLRDDLAGLVEV
                     TSGLARGDTLLTGGAMGTAAGTPVIVRKE"
     gene            complement(5312..6766)
                     /locus_tag="VGA78_10795"
     CDS             complement(5312..6766)
                     /locus_tag="VGA78_10795"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9894403.1"
                     /translation="MIRMRLLLSGTLVGLAAPLAAQQVRPLSLEDALGLAIPASETLE
                     LARAAVSRARGEHVRAAAGRWPEFNATLGYTRLLKSQFEGFSFGDSVGTGEEGSDQLP
                     FGQKNTFNLGLNVSWPLFSGGRVSGQVQAADASRRRADMGLTSAQAQVTLEVVQAYYN
                     AAAADYNVRIGEILLQQADTTLRQTELRRSAGTQPEFDLLRARVARGNARTVLIARQV
                     ERDVSYLDLRRLLGIPMDQPVTLTTSLVDTASAAQVPTLMRILSTPTDTAIERRIVVR
                     QAAEAVTAEEGLARATKSDRWPQLVVNSAYGRVGYPGNIDPFAPQYFTNWDVSVGIRF
                     PVFTGGRLRGNRMVADAGVQDARLRLRQVTELAQVDTRSALAQLGAAEAAWQASEGTV
                     EQARRAYEIAQLRYTEGLSTQVELLDARQAQAQAESLRLEAARSLGIARVRVALLPAL
                     PVAATVGFTTTGSLPLPASTRQTGTSTTSTGTTP"
BASE COUNT         1148 a         2462 c         2175 g         1111 t
ORIGIN      
        1 ccggtgaaga gcacgtacat catcagatcg cccagagtca tggtccccgc ggccacggcc
       61 cggcccccca tgatcatcat cagggcgccg atcccgccca ccaccacggt ggtgaggttg
      121 ccgagggctg agacgccggt gatggtggtg gcgatgttcc ggaacagctt gtggaccccc
      181 cgggcaaagg tgaggtcttc ccgccgttcc gctacatacg ccttgaccac ccggatgccg
      241 ctgagcgact cggtgagccg gccggtcacg gccgcattga tcttgcttcg ctcccggaag
      301 atgggccgca gcttgacgaa cgcgaacgac atcccccagc cgaacgcccc gaggaagagc
      361 agggtcccgg cggtgagctg ccagttgagc cagaacagga cccccagcgc gatgatcgcg
      421 gtgacgatcc cgcccaccag ctgcaccagg ccgctgccga ccagattccg gatcccctcc
      481 gcgtcggtca taatgcggct gatgagaatg ccggtctggg tgctgtcgaa gtgccgcacc
      541 ggcagccgga gcacgtgcgc ttccacttgg cgccgcatgt cggtcaccgc tcgctgcgcc
      601 gccacgccca gcaactggct caacgcgaag ccgctgccgg cctggatcac cgaggcgccg
      661 aaggccgcca gcgccaacgg caccagcatc tggtactgct ggccgatgat gacatggtcg
      721 atgaggtact tggagctccc gggaagcacc aggccggcga gccggctcac cagcatgagt
      781 accatgccga tggccagccg ccggcgatgc cggacgatca actctttgga ctcccgccag
      841 gcactcctca gggtgacctt gggcttggcg tccccttcgc cccggcgggt ggatcggcca
      901 cggccttccc tggcgtcggg cagacggggg ccaggctgag cccgagcggt cactggggtt
      961 cctcggaatt catggacctc ctcaactgaa agttcttagt actaaggact aaggactaag
     1021 taactaccaa cccacttagt cctaaaagtc cttaagtcct tagtcctagt ccttagtcct
     1081 gctgttcaag cgccggctcc acccccctgc gagtagaccg gaagatcctc cggacccgga
     1141 tccccagcca cgaccggctc tcgatcagga tctcgtagaa cgtggggatg gccaccagcg
     1201 tcagcagggt cgaggtgatg acgcccccga tcaccgccac ccccagcggc gcgcggaagg
     1261 cggcgccttc tccccggccg agggccacgg gcagcatgcc ggcgatcagc gcgaaagtcg
     1321 tcatcaggat ggggcgcagc cggatggcgc ccgcctcgat gagcgcttct cgcaacggca
     1381 ggccgtcacg ctcgtgagcc cacttggcga aatctatgag gaggatggcg ttcttggcca
     1441 cgattcccat cagcaggatc actccgatca agctcatgat gttcacggtg tgcccgctca
     1501 ggcccaacgc cagcatcact ccgatcaggg agagcggcag cgagagcatg atcgcgagcg
     1561 gatcggtgaa ggacccgaac tgcatggcca gcaccaggta catcagcaac accgccaggg
     1621 ccagcgcctg gaagatccgg gtgaagatct cggtctgctg ctcggcctgg cccccctcgg
     1681 tgacactcac accgtccgga atgttgagcc gcgccacccg cgccttcacg tcggtcatca
     1741 cttcaccggt ggagcggccg gagatgttcc agcccacggt gaccaccgga tcgcgattca
     1801 agtgattgat caccgccggc ccgagggcct gatcgatccg ggccacctgg ccaagcggca
     1861 cggtagtggg aaccccatcg gctcccagca tcaccagggg taactggcgc aggtcgttgg
     1921 ggctggtgcg cgcctggggt gacagccgga ccatcacgtc acgggtctcc ccgctcggat
     1981 cgatccagtc gcccgcgtcg agcccggcga acgccggccg gagcgattgc gccacctgcc
     2041 cgaccgtgat tcccagactg ccggccagcc cccggtcgat gtccaccgtg acttcgggcc
     2101 gctgcccctt ggtggagagc cccacgtcga ccgcgttggg cacctgcatc gcctccgccg
     2161 ccacttgctc agccacacgc tggatggtgc cgacgtcctc gccccgcacg tccagctgga
     2221 gcagcttcat gttgccgccc cagtcgctgt cacgcacggc gatcctgacc ccggctagcc
     2281 ggttgagctc gggccgcagg gccgcggcga tttcctgcac cgagcggtcg cgctcgctct
     2341 tgggcgtcag cttgaacatg atggtgcctt cgtccaccgc cccggtcagt ccaccgccca
     2401 gcgtggtgta gctgtaggtg acctccgata ctttggacgc gatggccagc acctcatcgg
     2461 cccggcgccg catgtactcg agattcgacc ccggcggggt ttccagaata acgaatacct
     2521 cggaccggtc gtcctcgggc acgaagccga cgcccaccag cctcagggcc ggcatcgcca
     2581 gagcgaaccc gaacgaagtg accgcgatgg ccaccaccgc ccagcggtgg tccagggccc
     2641 aggcaatgac cttcttatag ccctgagccc gccgattgaa ccaggcgttg aagcgatcga
     2701 gcagccgggt gatccagacc cgcttctccg gcgccacgtg gggatcggcc cagtaggccg
     2761 agagcatcgg atcgagcgag aacgagacca ggagcgacac cagcaccgag caggcgatgg
     2821 tgagcgcgaa cggcttgaac cactggcccg attcgccggt gaggaaggcc accgggatga
     2881 acaccgccag aatcgagaag gtggtggcgg tcaccgccag gccgatttca tcggtgccgt
     2941 cgtgggccgc ggtgaagtgg tctttcccca tctcgacgtg acgcacgatg ttctcccgca
     3001 ccacgatggc gtcgtcgatc aggatgccga tggccagcga cagccccagc agcgacatca
     3061 tgttgagggt gaagccgaag gccagcaccg cgatgaacga ggccagtacc gagaccggca
     3121 aggccaggcc ggtgatgacc gtcgaccgcc aggagttgag gaacaggaat accaccagga
     3181 cggtcaggat ggcgcccagc accagcgctt cctcgacgtt ccccaccgag tcctcaactc
     3241 gcttgccggc gtcacgcacc acatcgagcc ggacgttggc cggcatccgg gtccggactt
     3301 catcgatccg gagcatgatc cgctgggcca catcggtggt gctgtagccg gtggcctttt
     3361 tgagatcgat gccgaccgct tccttcccgt tgaagagcgc cagggtccgt tgttcctcgg
     3421 cgccatcctt cacttccgcg atgtcaccca gccgaatcag acggccgcct cgctccgaca
     3481 ccaccaactg ggcgaattcc tctggcccgg ccagccgacc ccgcaaccgg atcgaccgtt
     3541 cttccagctc ggtctcgacc cgtccgatgg gagccgccag attctgcagc tgcactgcct
     3601 ggaccacctc ggtgacactg atccgcgctc cctgcaacgc ctcgggccgg agctccaccg
     3661 tgagctcccg ctcccgcttg ccggagatcg tgacttccgc cacgccggtc agggagcgga
     3721 gctcgcgggt gatgccggga tcggccagcc gggtgagctc gcgggtcgag agcgcgtccg
     3781 acgacagcgc cagggacacg atggggtaat cggtttggtt gaacttccgg atcaccggct
     3841 cttccatctc ggtgggcaga tcgttccgga tcccggagat ggcatcgcgc acgtcctggg
     3901 tcgcttcggt tagctctttc tcgaagacga actcgaccat gatgaacgcg atgccgtctt
     3961 cggcccggcc ggtgatcttc tcgactccgc tgatcgagga gatcgcttcc tcgaccgggt
     4021 ccatgacttc cttctccacc gtttccggcg agccgcccgg atagggaatg gcgaccgtca
     4081 cgaagggagg cgcgacctcc ggaaactcgt cggtcttgag cgtgaacgcg gcgaaggtgc
     4141 cgaagatcac cagcgccagc atcaccacga tggtgatgat gggccgcttg atggcgaaat
     4201 cggaaatgac catgattcct ctactccttc cgcacgatga ccggcgtccc cgcggcggta
     4261 cccattgcgc cgcccgtgag gagtgtgtcc ccccgggcta gcccgctggt gacctcaacc
     4321 aaccccgcga gatcgtctcg cagccccagc tgcaccgcca ccacttccac ccggccttcc
     4381 ttgatccgcc gaaccgtcgg cgcggcgccc cgctggtcca ccgcgtccag cgggaccgcc
     4441 acggcgatct tggtctcggt gtcgacccgg cccttggcga acagtcccgc caccagtgac
     4501 ccggcgttcg ggatcgacac gacgatgcgc acctgacggg tgccggggtc cacggccgga
     4561 ttgatccgct tgatccggcc cgtgaacttc tggccttcgt acccggagac ctcgaactcc
     4621 acctccgaac cgactttcaa ggcgccgagc gccgagaccg ggaccgccgc ttcgagctgc
     4681 atgctggcgg ggtcgaccac ctcgaacagc tggtctccca cctggaccac gtcgcccacg
     4741 ctcaccttcc gcatactcac gatgccggcg atcggcgccc ggagctgggt ccgctgccac
     4801 tctcgctcgg ccgaggccag cgcggccttc gcgtcgtcca gctcggcctc cgcggtccag
     4861 cgcgcgcgtt cagccagctc cacgtcgcgc tccgccaccg cgccgccttg cagcagccgc
     4921 ttggcacgtt ccgcttcccg ccgggccacc gccgccgagt tctccgtcgc cgtcacccgg
     4981 ctcttggccg accgatagcg ctccgcaatc gcggtttcat cgagcgtcgc cagcagctga
     5041 ccggggcgga cccgttgacc ctcctcgacc ttcacggttc ggacgctggc gccgacctcg
     5101 gcgcgaatgg tcgcggcccg ctccgggctc agatcacccg agatggccgg tccgctctgg
     5161 agctcgaccg agtccaggac cttgatgttg tccggactca ctgtgacggc gacggcttcg
     5221 ggagcggatt ccgccttgga gcggttgccg caggccgagg tgaaggccgc ggcgccggct
     5281 acggtgagca atgcgattcg atcgaaggac atcatggcgt cgttcccgta ctggtagtgc
     5341 tggtcccagt ctgcctggtg cttgctggta gtggcaggct ccctgtcgtc gtgaagccca
     5401 ccgtggccgc caccggcaaa gccggcaaca gagccacccg gacccgggca attcccagcg
     5461 accgagccgc ttccagacgg agcgattccg cctgcgcctg tgcctgacgg gcgtccaaca
     5521 gctcgacctg ggtggagagt ccctcggtgt agcgcaactg cgcgatctca taggcccgcc
     5581 gagcctgctc gaccgtgcct tcgctcgcct gccacgcggc ctcggcagcc cccagctggg
     5641 ccagcgcgct tcgagtatcg acctgggcca gctcggtgac ctgccgcaac cggaggcgcg
     5701 cgtcctgcac tccggcatcg gcgaccatcc ggttgccccg gagccggccg ccggtgaaga
     5761 ccggaaaccg gatcccgacc gagacatccc agttggtgaa gtactggggc gcgaatggat
     5821 cgatgttccc cgggtacccc actcgcccgt acgccgagtt caccaccaac tggggccagc
     5881 ggtcggactt ggtggcccgg gccagaccct cctccgccgt caccgcctcg gctgcttgac
     5941 gcaccacgat gcggcgctcg atcgccgtat cggtgggcgt ggagaggatc cgcatgagcg
     6001 tgggcacctg cgccgccgat gcggtatcca ccagcgaggt ggtgagcgtc accggctgat
     6061 ccatcgggat gccgagcaac cgccgcaggt ccagatacga gacgtcccgc tccacctgcc
     6121 gcgcgatgag caccgtgcgg gcattgcctc gggcgacccg ggcccgcagc aagtcgaact
     6181 ccggctgggt ccccgccgag cggcgcagct cggtctggcg cagagtggtg tccgcctgct
     6241 gcagcaggat ctcgccgatc cgcacgttgt agtcagcggc ggccgcgttg tagtaggcct
     6301 gcaccacctc cagcgtcacc tgggcctggg cgctggtgag tcccatgtcg gcccgacgac
     6361 gggacgcgtc ggcggcctgc acctgcccgg aaacccgccc gccgctgaac agcggccacg
     6421 acacattgag gcccaggttg aaggtgttct tctggccgaa cggcagctga tcggatccct
     6481 cctcgccggt cccgaccgag tcgccgaacg agaagccctc gaattgggac ttgagcaatc
     6541 gggtgtatcc cagcgtggca ttgaactcgg gccagcggcc ggccgccgcg cggacatgtt
     6601 cgccccgggc ccgtgacacg gcggcgcgag ccagctccag ggtttcgctg gccgggatcg
     6661 ccagccccag cgcgtcctcg agcgagagcg ggcgaacctg ctgggccgcg agcggcgcgg
     6721 ccagcccgac cagcgtgccg gaaagcagca gtcgcatccg gatcatgacg cacgctcctg
     6781 ccgaacggtt gcggagctct tctccactcc gagcccccgg agcaagaagt ccacgtaacc
     6841 ctcgagggtc ttttccggcg tcttggtgta tacctccggc atcatcgtcc ggccca
//
LOCUS       DASWKS010000380         5926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_192852, whole genome shotgun sequence.
ACCESSION   DASWKS010000380 DASWKS010000000
VERSION     DASWKS010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5926
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192852"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..1884)
                     /locus_tag="VGA78_10800"
     CDS             complement(46..1884)
                     /locus_tag="VGA78_10800"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9894404.1"
                     /translation="MPKDGRAGRRTDGRFWRWSLAACVCLAPGSLSAQVDTARADTTR
                     APADTIDAYQMLVAGQEDAQTLARKFPRSGLERLLPPFGRIVLPRDSIDFINGETLGD
                     VLATIPGIYLWRGGWIGSPEVPNYFGRGATSVEYIVDGIPWVAMGPDSLALDPSFLPI
                     GLIDRIELEPLPGLLRVHLMLRNHDVLAPRTRVVVARGTQDQARYEGLIEKRFRSGFG
                     FGLGAEYSVRDAPNQASGDFSNSIGWIQTDWVPSRNFGVQLRYLLHAPDRTRTLTRTE
                     PADTLIRPVNGTRGDFTARVFLGGSNEGRLGPRADLSFTNTTWASDSLNQDRWQAGLV
                     LSNRSRTTSLEASAFLGSRWTRMDTRVIAGWSPSGLVSTSVEGAYQRYQSERDGRWLA
                     VRAGLALPLRFTVAGTWRLGDFVDHPSVLTDRDQRISDRQLSLTFEPFRAFSAHASYT
                     RLAAFRPTGMWAFAQIDSIAPNEPTQWMVLGGRLSPRQWLTVSGWYHHPIDSLVEGTP
                     PNHSLVELAIRSKFLRTFPSGIFDIKLAATVENWGTGVIGRDFEGNPVTLKGSTIFRA
                     LAQMQLAGVIVYFDRSNLLNTDLPFVPGLPIPSNVYSFGIRWGFLN"
     gene            complement(1877..3355)
                     /locus_tag="VGA78_10805"
     CDS             complement(1877..3355)
                     /locus_tag="VGA78_10805"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002073.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEX9894405.1"
                     /translation="MLSTKVVAAAPAGHTTPLLALLVTETGLPASLRPVDQQTGGAIG
                     RLYGAGDFRGKTDETALFYPEGPAARVLLVGIGRAAADRHAVRRGAAVASKRARTVGV
                     ERLSIAIAAEASTLPTTDLAQVITEGLVQGAWFFDGMKQPPAPEDNRPKLAGAELLFA
                     NQTAEAEAGHRTGEAIGAAHAAARDLQILPGNVCTPCYVGDTAEALGRQHGFKVTVLD
                     RDALKTEGMGALLAVAQGSAEEPRFIVLEYKGNGSPPVVLIGKGITFDSGGISIKPAD
                     RMEDMKYDMSGAAAVLGTFEMLGRLKPKLHVIGLIPSCENMPSATAYKPGDVVKAHSG
                     KTIEVVNTDAEGRVILADALSYARRFKPACVLDAATLTGAVVIALGHAATGLMGTDVA
                     LLNELREAGEKSGERVWELPLWDDYRDLIKSDIADVKNSGGRPAGTITGAWFLREFAD
                     GYPWAHLDIAGTAYSDRDMPSMVKGPTGVGARLFSEFVLARA"
     gene            3445..4482
                     /locus_tag="VGA78_10810"
     CDS             3445..4482
                     /locus_tag="VGA78_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894406.1"
                     /translation="MSTLVFTAGVLALLAPADTLSPDLASLPPAKVSVNEKVREIVIE
                     LPGIPLPAHTGHHGGGGGYPPVVRAEIPLDVSLYGFRVEVVDSEGRQLPSELIHHFNL
                     IDPNNRELFLPISRRILAAGKETGAQRLPRFFFGVPMKQGDLVVASAMLHNPTETDYA
                     DARVRLVLSYVPGNKWYPVFHGYTWQLDVAFPVGDKSFALPPGKSSRSYEARPSIPGK
                     IVALGGHMHEMGTLIELIEVESGKVLWSASPVLDAERNVTAIPVGKLYGWFKVGLPIR
                     PDRRYRVTVHYDNTTVAPVEAGGMGVIGGLFVPEKGAAWPAAEKNDPLYVQDALHYLR
                     VKRETMAGHNH"
     gene            4816..>5926
                     /locus_tag="VGA78_10815"
     CDS             4816..>5926
                     /locus_tag="VGA78_10815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX9894407.1"
                     /translation="MQTSQPALSEFLEALPDPALVLDRSVTIRLANPLAHSLFGYHPG
                     ELTARPFHTIVPAFNRGLLGQFTHPGHVTQSLGSNGVGCSCSARRKSGREFRVEIRSR
                     PIFVEDESFTLCILRNANEPEAANAPTWQTIERHRRTLDQMLEGCQIIGADWRYLYVN
                     DAVCRQGKKTQEELLSRTMMEAYPGIEATPVFAALRRCMQEQRPVAFENEFTYSDGTT
                     GWFELSIQPVPEGVLVLSIDITARKQAEREKERQLSNLKALREIDLAIIGSSDVNVAL
                     KTVLHEVTAQLAVDAADILLLNPHSQMLEYAAGRGFRSREIERTTLRPGQGIAGRAAL
                     EQRPYTITDLTQAHHFLREWLVSREAFVAYHALPLV"
BASE COUNT         1042 a         1944 c         1940 g         1000 t
ORIGIN      
        1 cgcccgcctg cccgccagtc cgcccgaccg ccagactcag gttcgctagt tcagaaaccc
       61 ccatcggatc ccgaacgaat acacattgct cggaatcggg aggccgggga cgaagggcag
      121 gtcggtgttg agcaggttgg agcggtcgaa gtagacgatc acgccggcaa gctgcatttg
      181 cgccagggcc cggaagatgg tcgagccctt gagcgtcacg ggattcccct cgaagtcccg
      241 tccgatgacg cccgtccccc agttctccac cgtggcggcg agcttgatgt cgaagatccc
      301 gctgggaaag gtccgcagga acttcgatcg gatggccagc tccaccaggg aatggttcgg
      361 cggcgtccct tcgacgagac tgtcgatcgg gtgatgatac cacccggaga cggtgagcca
      421 ttgcctgggc gacagccgtc cccccagcac catccactgc gtgggctcgt tgggagcgat
      481 cgaatcgatc tgggcgaagg cccacatccc ggtgggacga aacgccgcca gccgggtgta
      541 gctggcgtga gcgctgaagg cccggaacgg ttcgaaggta agcgacagct ggcgatcgga
      601 gattcgctgg tcccggtcgg tgagcacact ggggtggtcg acgaaatcgc ccagccgcca
      661 ggttccggcg acggtaaacc ggagcggcaa cgccagtccg gcccgcacgg cgagccagcg
      721 tccgtcgcgt tccgattggt agcgctggta ggcaccttcc accgacgtgc tcaccagccc
      781 gctcggcgac cagcccgcga tcacgcgggt gtccatccga gtccagcgag acccgaggaa
      841 ggccgaggct tccagactgg tggtgcggct gcggttggac aacaccaggc ccgcctgcca
      901 ccggtcctgg ttgagcgagt cgctggccca ggtggtgttg gtgaagctca gatccgctcg
      961 gggtcccagc cgcccttcgt tgctcccacc cagaaacacc cgcgcggtga agtcgccccg
     1021 cgtcccgttg accggacgaa tgagggtatc ggccggctcg gtgcgagtga gagtgcgggt
     1081 ccgatcgggc gcgtggagca gatagcggag ctgcacgccg aagttccgcg acggtaccca
     1141 atcggtctgg atccacccga tcgaattgct gaaatcaccg gaggcttggt tcggggcatc
     1201 gcgaacgctg tactcggccc ccagcccgaa cccgaatccc gatcgaaacc gcttctcgat
     1261 cagcccctcg tagcgggcct gatcctgggt cccgcgcgcc accaccacgc gggttcgggg
     1321 ggccagcacg tcgtggttgc gaagcatcag gtgaacccgc agcaacccgg gcagcggctc
     1381 cagctcgatg cggtcgatca ggccgatagg gagaaagctg ggatcgagcg ccaggctgtc
     1441 ggggcccatc gccacccagg ggatgccgtc gacgatgtac tccaccgaag tcgccccccg
     1501 gccgaagtag ttgggcacct ccgggctgcc gatccagccg ccccgccaga gatagatccc
     1561 gggaatcgtg gccagcacgt cccctagggt ctcgccgttg atgaagtcga tggaatcgcg
     1621 gggcaggact atcctgccga acggaggcag caaccgctcc aggccgctgc ggggaaactt
     1681 gcgagccagc gtctgggcgt cttcctggcc ggcgaccagc atctggtagg cgtcgatggt
     1741 atcggccggc gcccgggtgg tgtcggcccg ggccgtgtcg acctgtgccg agagactgcc
     1801 tggtgcgagg cagacgcacg ccgccaacga ccagcgccag aaccgaccgt cggtccgtcg
     1861 gcccgcccgt ccgtccttag gcacgcgcca ggacgaactc cgagaacaac cgcgcgccga
     1921 ccccggtggg tcccttcacc atcgacggca tatcccggtc ggagtaggcg gtccccgcga
     1981 tgtcgaggtg agcccaggga tagccgtcgg cgaactcgcg caggaaccag gctccggtaa
     2041 tggtgcccgc cggacgcccg ccactgttct tgacgtcggc gatatcggac ttgatgagat
     2101 cgcggtagtc gtcccagagc ggcagctccc agacccgctc accgctcttc tcgcccgcct
     2161 cgcgcagctc gttgagcaac gccacatcgg tgcccatgag accggtggcg gcgtggccca
     2221 gggcaatgac cacggcgccg gtgagcgtcg ccgcgtccag cacacaggcg ggcttgaaac
     2281 ggcgggcata ggaaagcgca tccgccagga tcacccgccc ctcggcgtcg gtattcacca
     2341 cttcgatagt cttgccggaa tgggccttga ccacgtcgcc tggcttgtag gcggtggcgg
     2401 acggcatgtt ctcacaggag ggaatcagtc cgatcacgtg cagcttgggc ttgagccgtc
     2461 ccagcatttc gaaggtgccc agtaccgccg ccgcgcccga catgtcgtac ttcatgtcct
     2521 ccatccggtc ggccggcttg atggatatgc cgccgctgtc gaacgtgatg cccttcccga
     2581 tcagcaccac cggcgggctg ccgttcccct tgtattccag cacgatgaaa cggggctcct
     2641 cggcactgcc ctgcgccacg gccagcaacg cccccatgcc ctcggtcttg agcgcgtccc
     2701 ggtccagcac ggtcactttg aatccgtgct gacgtcccag cgcctcggcg gtgtcgccga
     2761 cgtagcaggg ggtgcagacg ttgccgggga gaatctggag atcgcgagcg gcggcgtgcg
     2821 cggccccgat ggcttcgccg gtccgatgcc cggcctcggc ttccgccgtc tggttggcga
     2881 acaggagctc ggcgccggcg agcttggggc ggttgtcctc gggagcgggc ggctgcttca
     2941 tgccgtcgaa gaaccaggcg ccctggacca gcccttcggt gatcacctgg gccaggtccg
     3001 tggtcggcag ggtcgacgcc tcggccgcga tcgcgatcga cagtcgctcg accccgacgg
     3061 tgcgtgcccg cttggaggcg accgcggcgc cgcgccggac cgcatggcga tccgctgccg
     3121 cccgcccgat ccccaccagg agcacccggg ccgcgggccc ctcaggatag aagagggcgg
     3181 tctcatcggt cttgccccgg aaatcgccgg caccgtagag gcgtccgatg gcacccccgg
     3241 tctgctgatc caccggccgg agtgacgcgg gcagcccggt ctcggtcacg agcagggcga
     3301 gcagcggggt cgtatgaccc gcgggtgccg cagcgacgac cttggtgctc aacatggagg
     3361 ggcccgggtt gatgaccgcg aagaggtcaa agtaacccgg tgaggcgcat tgagaaaccc
     3421 gttgggatca cctaacttgc gcccatgtcg accctcgtct tcacggccgg agttctggcc
     3481 ctccttgctc cggccgacac cctgtcgccc gacctcgctt cactgccccc ggcgaaggtg
     3541 tcggtcaatg aaaaggtccg ggagatcgtc atcgagctcc ccggcatccc cctcccggcc
     3601 cacaccgggc accatggcgg tgggggtggt tacccgccgg tggtcagggc cgagatcccg
     3661 ctggacgtgt cgctctacgg gttccgggtg gaggtggtgg acagcgaagg caggcaattg
     3721 ccgtccgagc tcatccatca cttcaacttg atcgatccca acaaccggga gctgtttctg
     3781 ccgatctcgc gccggatcct ggccgcgggc aaggaaaccg gggcccagag gctgccccgg
     3841 ttcttcttcg gcgtgccgat gaagcagggc gatctggtgg tggcgagcgc catgctccac
     3901 aacccgaccg agaccgacta tgccgacgcg cgggtccggc tggtgctgag ctacgtgccg
     3961 ggcaacaagt ggtacccggt cttccatggt tacacctggc agctggacgt ggcgttcccg
     4021 gtgggagata agtccttcgc cctgccgccg gggaagtcca gccgttccta cgaagcgcgc
     4081 cccagcattc cgggaaagat cgtggcgttg ggcgggcaca tgcatgagat gggaacgctg
     4141 atcgagctga tcgaagtgga gagcggcaag gtactgtggt cggcctcacc agtgctcgac
     4201 gccgagcgga acgtgaccgc gattccggtt gggaagctgt atggctggtt caaagtgggc
     4261 ctgccaatcc ggcccgatcg ccggtatcgg gtcacggtgc actacgacaa caccaccgtg
     4321 gcgccggtgg aagcgggcgg gatgggtgtg atcggcgggt tgttcgtccc ggagaaaggc
     4381 gcggcctggc ccgcggcgga aaagaacgat ccgctctacg tccaggatgc cttacactat
     4441 ctgcgggtga agcgggagac gatggcgggg cataaccact agtcgaaggt ggtcgaaggc
     4501 ggtcgaagtg gtcgaagccg gttacacccc gccttcgact gatttcgacc gccttcgacc
     4561 gtcttcgacc attagtgccc gaggcgagag tcgaacccgc atggttgccg aaccagaggc
     4621 cagtttttca ggccccctca ggactccgct caatccctgg cacatcgctt gctacccttt
     4681 gcagaactca tcagtaccga gaggaactta aagcccagtc ctgaaagccg ttgcaggttc
     4741 gtgactgatg agcttagctc caggcggcga gataccgccg ctcaggagac cggcggagtt
     4801 gcagaaagca tttggatgca aacgtcccaa cctgctctaa gcgaattcct tgaggcgctc
     4861 cccgatccgg cgctcgtgct ggatcgctct gtgaccattc ggctcgctaa cccgctcgcc
     4921 catagcctct ttggatacca tcccggcgag ctcacggcgc gaccgtttca taccatcgtt
     4981 cccgcattca ataggggact ccttggccag ttcacccacc ctgggcatgt gacccagagc
     5041 ttgggttcga acggcgtcgg gtgctcgtgc tcggctcgcc ggaaaagcgg ccgtgagttc
     5101 cgggtcgaaa tccggtcgag accgattttc gttgaggacg aatcattcac gctctgcatc
     5161 ctgcggaacg caaacgagcc ggaggcggcg aatgcgccca catggcaaac catcgagcgt
     5221 caccgccgca cgctcgacca aatgctcgaa ggctgccaga tcatcggcgc tgattggcga
     5281 tacctgtacg tcaacgatgc ggtctgcaga caaggcaaga agactcagga ggaattactg
     5341 agtcgcacga tgatggaagc ctatccgggc atcgaggcca ctccggtgtt cgcggcgctt
     5401 cgccgttgca tgcaggagca gagaccggtc gcctttgaaa atgagttcac gtattcggac
     5461 ggcaccaccg gatggttcga gctcagtatt cagccggtgc cggaaggcgt cctcgtcctt
     5521 tccattgata tcactgcgag aaaacaggct gagcgagaga aggagcgcca gctcagcaac
     5581 ctcaaggctc tgcgcgagat cgatcttgcc atcatcggca gcagcgacgt caatgtggcg
     5641 ctcaagaccg tgcttcacga ggtgacggcc cagcttgcgg ttgacgcggc cgacatcctg
     5701 ctcctcaatc cgcactccca gatgctcgag tacgccgcgg gccgaggctt ccggtcccgc
     5761 gagatcgagc ggactaccct tcgtcccggc caagggatcg ctggtcgggc cgcgctagag
     5821 cagcggccgt acacaattac cgatctcact caggcccatc actttctccg cgagtggctg
     5881 gtgagccggg aggcgttcgt tgcctatcac gccctcccgt tggtag
//
LOCUS       DASWKS010000381        13809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2437071, whole genome shotgun sequence.
ACCESSION   DASWKS010000381 DASWKS010000000
VERSION     DASWKS010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13809
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2437071"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VGA78_10820"
     CDS             complement(<1..503)
                     /locus_tag="VGA78_10820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894408.1"
                     /translation="MTSGRLSRWLAVALAACGGGERQEYPTAEFPYPADTVLVPYVNV
                     PVAAWLGGVRWVVVSNEFNEAALVDFQGGRRPLGGEGDAEIRNPFGVFASADTGWVTD
                     WAMRRSTRWTSVGSPAGMMPAPEALRGALPSARDAAGQLYFEIRPEPGRDGSGNRDSA
                     SVVRMSG"
     gene            complement(500..3730)
                     /locus_tag="VGA78_10825"
     CDS             complement(500..3730)
                     /locus_tag="VGA78_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HEX9894409.1"
                     /translation="MRTLLRLAGAVLCLGAPLSLFAQTIDTTVYASLRWRNTGPLRGG
                     RSVAAAGSQARPNEYWMGTTGGGVFKTTDGGESWTPVSDRHFGGTIGAIAVAESNPDI
                     VYVGGGEFPIRGNTSHGDGVYKTTDGGRSWSYLGLVETRHIGKIRVHPRNPDVVYVAA
                     LGQVFGPSPERGIFKSTDGGRNWRRVLFRNDSTGAVDLSMDPNNPDVLYAGLWQAHRR
                     PWQLVSGGAGSGLFKSTDGGEHWTEITRNPGLPPRGLVGNVGISVSPAQASRVYALIE
                     HDSGGVFRSDDGGATWIKVNTERRLRQRAWYYTRIYADTRDPNTVYVSNVQFLKSTDG
                     GRSWTPLRAPHGDSHDLWIAPENNQRMIESNDGGSNVTRDGGRSWTAQDYLTAQFYHV
                     TTTNHFPYRICGAQQDNSTVCGTSRPTPPFRVGPVSDHGVADWYDAGGGESGYIAVRP
                     DDPDIIFAGSYGGLLTRKDARTGFERNINAWPMNPMGHSAGDLKYRFQWTFPIMISPH
                     DPNVLYVGANVLFRSTNEGDSFEAISPDLTRNDPSTLGPSGGPITRDQTSVEYYGTIF
                     TISESPVERGVIWVGTDDGLVQVTRDGGKTWANVTPPDAREWTRISIIDASPHQKGAA
                     YVAGNRYQMNDFRPYLWRTTDYGKNWTPIVSGIRPTDFTRVIREDPERAGLLFAGTER
                     GVWVSFNDGAAWQSLQLNLPPVPIHDLAVRAGDVVLGSHGRSFFILDDISVLRQLGAD
                     KTEREAHLFEPRAAYAALGGAQISYWLKRGAQRVKLEFLDAKGAVIREFTSDSIVTGR
                     PAPSREAEQARLDSLRNLGVLPATARPLAPPAAAPQPTGGFSGPPPPQRLPNAQGLNR
                     FTWNLRYPDASRFEGLIMWAAGTAGPIAPPGTYSARLTVGDKTETVPLQLLKDPRSKA
                     SDADLQERFALALEIRDKTTEANDAVRTIRNVKGQLTQRQKEAGSRAGAVERLARPFT
                     TELSAIEAEIYQVRNESSQDPLNFPIRLNNKIAALAGVVGSAEAKPTQQTREVFRILS
                     DSLAIQTGRLKRSLDSSLPPINRELERLGLKAIVPSTAELAREERP"
     gene            complement(3810..6206)
                     /locus_tag="VGA78_10830"
     CDS             complement(3810..6206)
                     /locus_tag="VGA78_10830"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894410.1"
                     /translation="MDSILRDLRFALRSLRRSPGLVAIATLSLALGIAVNVTIFAAVD
                     ILLFRPLPFQEPDRLVHLWSTNPSRGWDQTSISLADFRDWREQSRTMTLVAYRRASFN
                     LSDDTEEPIRASGARVSPGFFTVLGARPALGRGFGLEEEQPGKDGVVVLSDLFWRDRF
                     EADPGIIGRTIRLDGQMVTVVGVMEAGFDFPENAIDMWITLPLIEEDRDSRYLRVLGR
                     LTPGVSIEAAQAELDGITRSLATTYPASNKGMGGQVIRLHDEVVEPEARQAGVICLVA
                     VFFVLMIACANVANLLLARGAARSRELSVRAALGAGRGRLVRELLAESLVLAAIGCAL
                     GVVASFWGIGLFRSIMPSDFPRVDLLAIDGPVLLYAILVGGLAGLAFGTAPALQVTGV
                     GLSSALAEGGRGGSTGLKHRRLRTAFVIGEVALAQVLLISAGLMIKGAWRLQNTEPGF
                     EPRQVLAFGLTLGDREYTDTLRVTALQETILARLRELPGVEAASGITQLPMSGGSGTY
                     YMVEGAPPPPEGERPVVQQRGVFPGIVPALGLSLVRGRDVAATDRRGTTPVTLVNEAF
                     AKRHWPDGDPLGQRITFFGATWEIVGVVTDVREFGADDPAPPIVYYPALQRTARSPQL
                     ILRSSGDPAALAGPVREALGALAPNLPIYAVRTLEEHIQEQNTGNTIMPKLLSTFGAL
                     ALLLALLGVYGVMAYTVTQRERELGIRRVLGAQVKDISWLVLGHGLRLAGIGAVIGLL
                     IALGVTRSLSTFLLGVSAFDPVVFAGVTVSLVAATVAASTLPAKRATAVDPGVALRAE
                     "
     gene            6479..6649
                     /locus_tag="VGA78_10835"
     CDS             6479..6649
                     /locus_tag="VGA78_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894411.1"
                     /translation="MAYELYDERGRSLGRVLMPRDETIIGPQAGTVLLRRELPQVYPR
                     HESGGGSPARAA"
     gene            6835..9096
                     /locus_tag="VGA78_10840"
     CDS             6835..9096
                     /locus_tag="VGA78_10840"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX9894412.1"
                     /translation="MRFVVPFLLFLLSASPLGAQPAGAIGSVVDSLHAAAERALADGR
                     PWKATRTIAPLLETPITRTPITLLTAARAAAGWEGWATVIRLLMGQSWLDVESEGEGR
                     ALLARAMVERGDPGAADHARFAVLVAVSAERRGERLVTLGRAHDRAGRYDSAGVAYLR
                     AAANLPAVADWLKLRAAGVLADSGSRSALYAQVRTPAAQSRIPWTEALARERTSDFAA
                     AARIYDQIGARLSAIRLRIALAGDNASRRQLRRELVKLLPQLPIADVGAAVDLLDRSF
                     APLPLTDEIVAARRAAAAGELQRAARGFARSGGPGIITDGDRITYGTVLARLGRHREA
                     IGQFDRVRDRSRRAEARYHRARSLFRVAGEAQGLAALRRVRDSFPNDSIWAATAGWLV
                     ADALVDDGADSLALGQFHAVARRFPATIHGDRSAFQAALITYLQGQYVVAAKLFEAVT
                     DSRPGSGESTAGWYWAGRAWESAGDTARARGRWGQLVTRFPQSYYAVPASRRLGVPAW
                     TSVPGKALSGSDTSLSEGLLRAERLRQLGLDFESRQEFDRLQRMPGSSAALLETGRAL
                     LGEGHAARALRLAQRAVDRGAGYDDELLRLLYPLPAREVLEDEARAVSLPPFLIAGLI
                     RQESLFDPAARSRADARGLMQVLPSVGAVYARREGLPEWDPVLLYQPDVNLHFGLLHF
                     AERQQACGGLLESALAAYNAGPTPVNRWLTRAGTSDPEVFLERIPYVETRDYVRRVLY
                     NQARYESLYGPQP"
     gene            9252..10460
                     /locus_tag="VGA78_10845"
     CDS             9252..10460
                     /locus_tag="VGA78_10845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894413.1"
                     /translation="MLKRLSLVIGLGSVAVPIAAQQKLALTKPDAEFAEPYTSLRSVR
                     ELADGRVVVADAIDKVVHILDFRSGTALKIGREGRGPEEYLIPMSLFPTPDGGALLAD
                     LGNRRLLPIAPDGKIGKAISVPTPSAPSGNQGEGRRMMMTGLFNPQASDAKGNLYFQG
                     AALPDADGKPVDSVPLLRWAPGTSQIDTMTWLPLTDAMRPQIQRDVGGRGTMMVRMGG
                     GAAWAKQVGWSVAADGRIAIVTPEPYRVTWVGGANRTVGPVIPYTPIKVTEADKKQYL
                     DQQSRARPVIATFGGGGRAAPPPNIQNNPQDTRFPETKPAFSGNNAVLVTPEGDVWVN
                     RLRPASEPSPLYDVFDDRGRKQGEVTLRPRSRVVGFGQGTVYVIRTDEDDLQYLERFK
                     RPSRQVTLKD"
     gene            10678..11007
                     /locus_tag="VGA78_10850"
     CDS             10678..11007
                     /locus_tag="VGA78_10850"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9894414.1"
                     /translation="MAGPPELQQGTLDLLILKTLAQGPLHGWAVSRRIRETSKDVLQV
                     QQGSLYPALYRLEDRGLVTAEWGISTEGRRAKFYQLSPAGRRRLAQETEAWRVYSGAV
                     NLVLKAT"
     gene            11014..13629
                     /locus_tag="VGA78_10855"
     CDS             11014..13629
                     /locus_tag="VGA78_10855"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894415.1"
                     /translation="MITPSQLLRRLRALFGSRRLDDAMDEEMRFHLDMEAEAEMRSGL
                     SAPQAVRQARVSFGGVERYREEGRDARGVRGLHDLAGDLRYAVRMLRRSPIFTLVAVI
                     TLGLGIGANTAIFSVVNTVLLQPLPYPDPERLVKVWGEGHSRAEFTRIRDRARSFERV
                     AAYLPAYGMSLSGDGDPLRVVTALVSADFFSLLGVSPASGRFFRPGEDLPGTEPVAVL
                     SFGLWRDRFGADPSIAGRTIELEGVRWTVIGVAPREFGFPGPETRLWVPLTLDEKDAG
                     PFWGAYGHHLIARLAPAVTPEQARAEVETIAAALRLENPIWRPDQDYTRGITVNSLQD
                     HLVADSRRLLGVLLGAVGLVLLIACANVANLLLVRGTARERELAIRATLGAGTRRLTR
                     QLLVECGVLAAIGGAGALALAVAGTRALIRLLPASTPRLADVSLDGTTLGFTVLLTFL
                     TALAFGLLPALRLARTDAQATLAGDRSTAGSHPRRLAGFLVSAQIALAVVLAVGAGLL
                     VRSLSLLLDVDPGFETARIATARVSPAQARLPEEEAARAYYRQLLEGLGTAPGIETAA
                     ITTQLPFDQTNRVMAMWIDGWTTDPNRLDLFEVRKVSPELFRAMGIPLRKGRGFSGED
                     HATSPRVAIVSETALRRFWAGREIIGGRIRYPWPGWMTVVGVAADVRNNDLRENPLPT
                     IYIPFEQDPEVSVTVVARATGDPRRALSAIRATVTALSPDVPVSDAEAMERLIERSVA
                     APRSACLLLIGFGLLALVLGAVGTYGLIAYGVERRTREIAVRMAVGARRNAVVRMIVR
                     EGARLAGLGILAGLVVAFGLARFMQGLLYEVGPTDPVVFAVAPLVLGLTALLACLVPA
                     LKAARIEPSMALKRE"
     gene            complement(13616..>13809)
                     /locus_tag="VGA78_10860"
     CDS             complement(13616..>13809)
                     /locus_tag="VGA78_10860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894416.1"
                     /translation="ATMIIAVRGWRRLPDMVKGSAIAARAGLLGSSLLFASVLVTWVE
                     GDVMSPRDGVTFPTVATPA"
BASE COUNT         2161 a         4712 c         4721 g         2215 t
ORIGIN      
        1 tctccgctca tccgcaccac cgaggcggag tcccggttac cgctgccgtc gcggcccggt
       61 tcgggacgga tctcgaagta gagctggccg gccgcgtccc gagcgctggg gagcgcgccc
      121 cgcagtgcct cgggcgccgg catcatcccg gccgggctcc cgaccgaggt ccagcgggtg
      181 gagcggcgca tcgcccaatc cgtgacccag ccggtgtccg ccgaggcgaa caccccgaac
      241 ggattacgga tttcggcgtc gccctcgcct cccagggggc ggcggccgcc ctggaaatca
      301 accagggcgg cttcgttgaa ttcgttggag acgaccaccc agcgcacccc gcccagccag
      361 gccgccaccg gcacattgac gtacggcacc agcacggtgt cggccgggta ggggaactcg
      421 gccgtggggt attcctgccg ctcgccccca ccgcaggccg ccagagccac ggcgagccac
      481 cggctcaacc gccctgaggt cacgggcgtt cctcgcgcgc caactcagcg gtgctcggca
      541 caatcgcctt gaggccgagc cgctccagct cccggttgat gggcggcaga gagctatcga
      601 gggaccgctt caaccgaccg gtctggatcg ccagcgaatc ggacagaatc cggaacactt
      661 cccgggtttg ctgggtcggt ttggcctccg cgctgccgac cacgcccgcg agcgcggcga
      721 tcttgttatt gagccggatc ggaaaattga gcgggtcttg cgagctctcg ttccgcacct
      781 ggtatatctc ggcttcgatc gcagacagct cggtcgtgaa gggacgcgcc agccgctcca
      841 ccgcgccggc gcgagagccg gcttcctttt ggcgctgggt gagctgcccc ttcacattgc
      901 ggatggttct gaccgcatcg ttggcctccg tcgtcttgtc ccggatctcg agcgccagcg
      961 caaaccgctc ctgcagatcg gcatcgctcg ccttggaccg ggggtccttg aggagttgga
     1021 gcggaaccgt ttcggtcttg tccccgaccg tgagccgcgc cgaataggtg cccggcggcg
     1081 cgatcggccc cgccgttccg gcggcccaca tgatcaggcc ctcgaatcgg ctcgcatcgg
     1141 gataccgcag attccaggtg aaccggttga gcccctgggc attgggaagt cgctgcggcg
     1201 gcggcggtcc gctgaaccct cccgtcggct ggggcgccgc ggcgggcggc gcgagtgggc
     1261 gggcagtggc gggcagcacg cccagattgc gcagactgtc gagccgcgcc tgctccgcct
     1321 cccgggaagg cgccggacgg ccagtgacga tggagtcact ggtgaactca cgaatcacgg
     1381 cgcccttggc gtcgaggaac tcgagcttca cccgctgggc tccacgcttg agccagtaac
     1441 tgatctgggc cccgcccagg gcggcatagg cggcacgggg ctcgaacagg tgcgcctccc
     1501 tctcggtttt gtcggcgccg agctggcgca gcaccgagat gtcgtcgaga atgaagaagg
     1561 accggccgtg cgagccgagg acgacatcgc cggccctgac ggcgaggtcg tggatcggaa
     1621 ccggcggaag attcagttgc agtgactgcc aggcggcccc gtcgttgaag gagacccaca
     1681 ccccccgttc ggtgccggcg aacagcaggc cggcccgctc cggatcttcc cggatgacgc
     1741 gggtgaaatc ggtcggcctg atccccgaga cgatcggggt ccagttcttc ccgtagtcgg
     1801 tggtcctcca cagataaggc ctgaaatcgt tcatctggta gcggttcccg gcgacatacg
     1861 cggccccctt ctggtgaggc gacgcgtcga tgatcgagat ccgggtccac tcgcgcgcat
     1921 cgggtggagt gacgttggcc caggtcttcc cgccgtcacg ggtcacctgg accagcccgt
     1981 catcagtccc gacccagatc acaccccgct ccaccggcga ttcggagatg gtgaagatgg
     2041 ttccgtagta ttcgacgctg gtctggtccc tggtgatggg gccgcctgac gggcccaggg
     2101 tgctggggtc attccgggtg aggtccgggc tgatggcctc gaacgagtcg ccctcgttgg
     2161 tgctccggaa aagcacgttg gcccccacgt acaggacgtt gggatcgtgg ggcgagatca
     2221 tgatggggaa ggtccactga aaccggtact tgagatcgcc ggccgaatgg cccattgggt
     2281 tcatcggcca cgcattgatg tttcgctcga atccggtgcg cgcgtccttc cgggtgagca
     2341 ggccgccgta gctgccggcg aaaatgatgt cgggatcgtc cggccgcacc gcgatgtagc
     2401 ccgattcgcc cccgccagca tcgtaccaat ccgccacgcc gtgatcgctc accgggccga
     2461 ccctgaaggg aggggtcggc cggctggtgc cgcagaccgt gctgttgtcc tgttgggcgc
     2521 cgcagatccg gtaggggaag tggttggtgg tggtaacgtg gtagaactgg gccgtcaggt
     2581 agtcctgggc ggtccagctg cggccgccgt cccgggtgac gttcgagccc ccatcgttgg
     2641 actcgatcat ccgctggttg ttctccggcg cgatccacag atcatggctg tcgccgtggg
     2701 gagcgcggag cggagtccag ctccggcctc cgtcggtgga cttgaggaac tgcacgttgc
     2761 tcacgtacac ggtgttggga tcccgggtat cggcgtagat ccgggtgtag taccaggccc
     2821 gctgccgcaa ccgccgctcg gtgttgacct tgatccaggt ggcgccgccg tcatcgctcc
     2881 ggaatacccc accggagtcg tgttcgatca aggcatacac ccgcgaggcc tgggccggtg
     2941 acacgctgat gcccacgttg ccgaccaggc cgcggggagg cagccccgga ttgcgggtga
     3001 tctcggtcca gtgctcgccc ccatcggtgg atttgaagag gccgctcccg gccccaccgc
     3061 tcaccagctg ccagggtcgg cgatgggcct gccacaggcc ggcgtagagc acgtcggggt
     3121 tgttgggatc catcgagagg tccaccgcgc cggtggagtc gttgcggaac agcacccgcc
     3181 gccagttgcg gccgccatcg gtggatttga agatgccgcg ctcgggactg gggccgaaca
     3241 cctggcccag cgccgcgacg tagaccacgt cggggttgcg gggatgaacc cggatcttgc
     3301 cgatgtggcg ggtctcgacc agccccaggt agctccagct gcgcccgccg tcggtcgtct
     3361 tgtacacccc gtccccgtgc gatgtgttgc cgcggatggg aaactcaccc ccgcccacgt
     3421 agacgatgtc ggggttcgac tccgccaccg cgatggcccc gatggtgccc ccgaaatggc
     3481 ggtcactcac cggggtccag ctctcgccgc cgtcggtggt cttgaagacg ccgccgccgg
     3541 tggtgcccat ccagtactcg ttgggtcggg cctgcgagcc ggccgcggcc accgagcgcc
     3601 caccccgcaa tgggccggtg ttgcgccagc ggagcgaggc atagacggtg gtgtcgatgg
     3661 tctgggcgaa aagcgagagc ggggcgccaa gacacagcac cgcgccagcg aggcggagca
     3721 gagtgcgcac gaagggatcc gggatgtcgg gtagggcgag aatatactcc aactgactac
     3781 tgagtactga gtactcagta ctggtctgtt tattccgctc tcagggccac tcccggatcc
     3841 accgccgtgg cccgcttggc cggcagggtg ctggccgcga ccgtcgcggc taccagcgac
     3901 acggtgacgc cagcgaagac cactggatca aacgcactga ctcccagcag gaacgtgctc
     3961 agagaccggg tcacacccaa ggcgatcaga agcccgatga ccgcgccgat gcccgccagc
     4021 cgcagcccgt gccccaacac cagccacgag atgtccttca cctgggcccc gagcacgcgg
     4081 cggatcccca gctcccgctc acgctgggtc acggtgtagg ccatcacgcc atagaccccc
     4141 agcagcgcca gcagcagcgc cagggcgccg aacgtgctga gcagcttggg catgatggtg
     4201 ttgccggtgt tctgctcctg gatgtgttcc tccagggtgc gaaccgcgta gataggcagg
     4261 ttgggcgcca acgcgcccag cgcttcgcgg accggtcccg ccagggccgc cggatctccc
     4321 gagctacgca ggatcagctg gggtgagcgg gccgtccgtt gcagggcggg atagtacact
     4381 atgggtgggg ccgggtcgtc ggcaccgaat tcgcgcacgt cggtgaccac tcccacaatt
     4441 tcccaggtgg cgccgaagaa agtgatgcgc tgtcccagag gatcgccatc gggccagtgc
     4501 cgtttcgcga acgcttcgtt gaccagagtc accggcgtgg taccgcggcg atcggtagcg
     4561 gccacgtctc taccccgcac caatgacagg cccagcgcgg ggacgatccc cgggaacacg
     4621 cctcgctgct gtaccaccgg tcgctcgcct tccggtggcg gcggcgcccc ttcgaccatg
     4681 taataggtgc cgctcccgcc cgacatcggg agctgggtga tgccgctggc cgcttcgacc
     4741 ccgggcaact cacgcagccg agccaggatg gtctcctgca gggccgtcac tcgcagcgtg
     4801 tcggtgtatt cccggtcgcc gagggtcaga ccaaacgcca gcacctggcg cggctcgaac
     4861 cccggctcgg tgttttggag ccgccacgcg cccttgatca tgaggcccgc cgagatcagc
     4921 agcacctggg ccaacgctac ttcgccgatg acgaacgcgg tacgcagccg gcggtgcttg
     4981 agaccggtgg aaccgccccg gccaccctcc gccagcgcgc tggacagccc gacgccggtc
     5041 acctgcagcg cgggcgcggt cccgaacgcc aggccggcca gaccgccgac caggatggcg
     5101 tacagcagga ccggcccgtc gatcgccaac aggtcgaccc gcgggaaatc gctcggcatg
     5161 atcgagcgga acaggccgat accccagaac gacgcgacca ctcccagcgc gcagccgatc
     5221 gccgcgagca ccaggctctc tgccaacagc tcgcgcacca gccgaccccg tccggcgccg
     5281 agcgcggcgc gaaccgacaa ctcgcgcgat cgcgccgcgc cgcgggccag cagcaggttc
     5341 gccacgttgg cacaggcgat catcagcacg aagaagactg ccaccaggca gatcacgccg
     5401 gcctgacggg cctccggctc caccacctcg tcgtgcaacc ggatcacctg accgcccata
     5461 cctttgttgc tggccggata ggtcgtcgcg agcgagcggg tgatgccgtc cagctcagcc
     5521 tgggccgctt cgatcgagac ccccggcgtc agccgcccca gcacccgcag gtagcgactg
     5581 tcgcggtctt cctcgatgag cggcagggtg atccacatgt cgatcgcgtt ttccggaaag
     5641 tcgaacccgg cctccatgac ccccaccaca gtcaccatct gaccgtccag ccggatggtg
     5701 cggccgatga tccccggatc ggcctcgaat cgatcgcgcc agaacagatc ggacagcacc
     5761 acgacgccgt ccttgccggg ttgctcctct tccagcccga acccgcgtcc cagggcggga
     5821 cgcgcgccga gcacggtgaa gaagccggga ctcactcgcg ccccgctggc ccggatcggc
     5881 tcttcggtgt cgtccgagag gttgaagctg gcacgccggt aggccaccag ggtcatggtc
     5941 cggctctgct ctcgccagtc gcggaagtcc gccagagaga tgctggtctg gtcccagccc
     6001 cgcgaaggat tggtggacca caggtgcacc agccgatccg gttcctggaa ggggaggggc
     6061 cgaaacagga ggatgtcgac cgccgcgaaa atcgtgacgt tcacggcgat gcccagagcc
     6121 agcgaaagcg tcgcgatggc caccaggccc ggactccggc gcagggaccg cagcgcgaac
     6181 cggaggtcgc ggagtatgct gtccataatc tcggccatac gctgcgggcc ggcgcagcgt
     6241 ttcacattcg gacggcctga cggcctgacg gaccgacgga ctgacggacc gacggaccgt
     6301 cagcgttcca tttgcgaaac acgccaccgg ccgtccggcc gtcggcccgc ccgtccgtcc
     6361 gtttgcaacc ctttcctgta tgagagcatc acactgaatg cgtggcggaa ggacgcaggt
     6421 cgagatggcg gatcagccgg gggtaccgat ggtgatgcgt tgcgaaaacg aaagagtcgt
     6481 ggcctacgag ttgtacgacg agcgaggccg gtccctggga agagtcctga tgccccggga
     6541 cgagacgatc atcgggcccc aggccggcac cgtgctgctc cgccgggaat tgccgcaagt
     6601 gtacccccgg catgagagcg gcgggggatc tcctgccagg gccgcatgac acgggacgga
     6661 cgacactggt ggggatacgg ggccggggga tcggccccgt tttcatttca gggaagactg
     6721 gggatggtgg ggaggggggc cccctcctcc ctctgacctc cgcaagaggt tgttttcatc
     6781 cgggtcgtct gcgtaatctg cggacgaccc gttccagacg gctctgcttt cacgatgcgc
     6841 ttcgtcgttc cgtttctgtt gttcctgctg tcggcaagcc cgctgggcgc acagcccgcg
     6901 ggagccatcg gctcggtggt cgattctctt catgccgccg cggagcgtgc cctggccgac
     6961 ggcaggccgt ggaaggccac ccggaccatc gctcccttgc tcgagacacc cattacccga
     7021 accccgatta cgctgctgac tgcggcccgc gcggccgcgg gatgggaggg atgggccacg
     7081 gtcatccggc tcctgatggg gcaatcgtgg ctcgacgtcg aatcggaagg cgaaggccga
     7141 gccctgctgg cacgggccat ggtggagcgg ggcgatccgg gcgccgccga tcacgcacgc
     7201 ttcgcggttc tggtcgcggt aagcgcggag cggcggggcg agcggctggt aacgttgggg
     7261 cgagcccatg atcgggccgg acgctacgac agcgccggcg tggcgtacct gcgtgccgcc
     7321 gccaatcttc ccgcggtagc cgactggctg aaactgcgcg ctgccggagt gctggccgac
     7381 agcggctctc gttccgcgct gtacgcccag gtccgaactc cggcggccca gagccgcatc
     7441 ccgtggaccg aagccctcgc ccgcgaacga accagcgatt tcgctgcggc agcgcggatc
     7501 tacgaccaga tcggcgcccg gctctcggcc atccggctcc ggatcgctct cgccggagac
     7561 aacgcctccc gccggcagct acggcgcgag ctggtgaaac tcctgcccca gcttccgatc
     7621 gccgacgtcg gagccgcagt cgacctgctc gatcggtctt tcgcgccgct gccgctgacc
     7681 gacgaaatcg tagcggctcg ccgcgctgcg gccgccgggg agctgcagcg ggcggcccgc
     7741 ggcttcgccc gctccggtgg gccgggaatc atcaccgacg gggatcgtat cacctacggg
     7801 accgtgctcg cgcgcctggg ccggcaccgt gaggcgatcg gccagttcga ccgggtgcgc
     7861 gatcgcagcc gtcgggccga agcccgctac catcgagccc gaagtctctt tcgggtggca
     7921 ggcgaggccc agggactcgc cgcgctgcgg cgggtacgcg actcctttcc taacgacagc
     7981 atctgggccg ccaccgcggg atggctggtc gccgatgcac tggtcgacga tggggccgac
     8041 tcgctggccc tgggccagtt ccacgccgtc gcccgccgat ttcccgcaac catccacggc
     8101 gaccgatcgg cgttccaggc ggcgctgatc acctatctcc agggacagta cgtggtggcc
     8161 gccaagctgt tcgaagccgt gacggacagt cggccaggat ctggggaatc gaccgccggg
     8221 tggtactggg ccgggcgggc ctgggaatcc gctggtgaca cggcccgggc ccggggccgc
     8281 tggggtcagc tggtcacccg cttcccccag tcgtattacg cggtgccggc ttcacgccgg
     8341 ctgggtgtgc cggcatggac ctcggtgccc ggcaaggcat tgagcggcag cgacaccagc
     8401 ctgagcgaag gcctgctccg ggccgaaaga ctgcgccagc tgggcctcga tttcgagtcg
     8461 cgccaggagt tcgaccggct ccagcgcatg ccgggcagta gcgcggcgct gctggaaacc
     8521 ggtcgtgccc tcctgggcga gggacatgcc gcccgcgccc tgcgactggc gcaacgggcg
     8581 gtcgatcggg gtgccgggta cgacgatgag ctgctccggc tgctgtaccc gttgccggcg
     8641 cgggaggtcc tggaagacga agcccgcgcg gtgtccctcc cccccttcct catcgccgga
     8701 ctgatccgcc aggaatcgct cttcgatccg gccgcccggt cccgggccga cgcccgggga
     8761 ctgatgcagg tgctgcccag cgtcggtgcc gtctacgccc ggcgggaagg actgccggaa
     8821 tgggatccgg tgctgctcta ccagccggat gtgaatctgc atttcgggtt gctccacttc
     8881 gccgaacggc agcaggcctg cggcggcctg ctggaatcgg ccctcgcggc ctacaacgcc
     8941 ggccccaccc cggtgaaccg ctggctgacc cgtgccggca cttccgatcc ggaagtgttt
     9001 ctcgagcgga tcccctatgt cgagacccgc gactacgtgc ggcgggtgct gtacaaccag
     9061 gcccgatacg agtctctcta cggaccccaa ccgtaggcag ggggcaggga gcagggagca
     9121 gggagcaggg agcggggagc tgggagaggg gaggcgggag cgggattggg ggcggtcact
     9181 cccccacaag cttgcgacct ttctggagcg gcccgcatca agctgtggta acccttgcgc
     9241 cggacaatgc catgctgaaa cgcctttcac tggtcatcgg gctcggttcg gtcgcggtcc
     9301 ctatcgctgc ccagcagaag ctcgcgctca ccaagcctga cgccgaattc gccgagccct
     9361 acaccagcct gcgatcggtc cgggagctgg ccgacggccg ggtggtggtg gcggatgcga
     9421 tcgacaaggt ggtccacatc cttgatttcc ggagcggaac cgccctcaag atcgggcggg
     9481 aaggtcgggg gccggaagag tacctgatcc caatgagctt gtttcccacc cccgatggcg
     9541 gcgccctgct cgccgatttg ggcaaccggc ggttgctccc catcgctccc gacggcaaga
     9601 tcggcaaggc gatctcggta ccgaccccct cggccccgtc gggaaaccag ggcgaaggac
     9661 gacggatgat gatgacaggc ctgttcaatc cgcaggcctc ggacgccaag ggtaacctct
     9721 acttccaggg cgcggccctc ccggatgctg acggcaaacc ggtggattcg gtgccgctgc
     9781 tccgctgggc gccaggcacg agccagatcg acaccatgac ctggttgccg ctcaccgacg
     9841 cgatgcgtcc ccagattcag cgcgacgtcg ggggacgagg aaccatgatg gtccgcatgg
     9901 gcggcggggc ggcctgggcg aagcaagtcg gatggtcggt cgccgctgat ggccggatcg
     9961 ccatcgtcac gccggagccg taccgggtca cctgggtcgg cggcgccaac cggaccgtcg
    10021 ggccggtgat cccctacaca cccatcaagg tcaccgaggc cgacaagaag caatacctcg
    10081 accagcagtc ccgggctcgg ccggtgatcg ccaccttcgg gggcggaggc cgggccgctc
    10141 cgccgcccaa cattcagaac aatccgcagg acaccaggtt tcccgaaacc aagccggcct
    10201 tcagcggaaa caatgcggtg ctcgtgaccc cggaaggcga tgtctgggtc aaccggctgc
    10261 ggccggcgag cgagcccagc ccgctgtacg acgtcttcga cgatcggggc cgcaagcagg
    10321 gcgaagtcac cctgcggcct cggagccggg tggtggggtt cggccaggga actgtctacg
    10381 tgatccgcac cgacgaggac gatctacagt atctggaacg gttcaagcgt ccgagtcggc
    10441 aagtcacact gaaggactaa ggtctaagga cttaagacta cgtaactgcg aagggtgagg
    10501 gatgagggtg gcggcaggat ctctgcggac ctgctgctcc acctccaccc ctcacccctc
    10561 gcagttactt ggtcctctct aaaagccctt aagaccgtag tcctgcagtg ttgctgttga
    10621 cggtctacaa caagcagtgc atcttgttgt cgtccgtcta ggcatcagga gcgtggcatg
    10681 gccggtcccc ccgagctgca gcagggcacc ctcgatcttc tcatcctcaa gaccctggcg
    10741 caggggccgc tgcacggctg ggccgtctcg cgccggatcc gcgagacctc gaaggacgtg
    10801 ctgcaggtgc aacaggggtc gctctatccc gcgctctacc gcctggagga ccgaggcctg
    10861 gtgaccgcag agtggggcat ctcgaccgag ggccgccggg ccaagttcta tcagctgagc
    10921 ccggccggcc ggcggcggct ggcacaggag accgaggcgt ggcgggtcta ttcgggcgcc
    10981 gtgaatctgg tcctcaaggc gacctgagcg atcatgatca cgccttccca gctgctccgc
    11041 cgcctccgcg ccctctttgg gtcgcgccgc ctggatgacg ccatggacga ggagatgcgc
    11101 tttcacctgg acatggaggc cgaggcggag atgcgttccg gcctttcagc gccccaagcc
    11161 gtgcggcagg ctcgggtgag cttcggtgga gtcgagcgtt accgcgaaga ggggcgcgat
    11221 gcccgcgggg ttcggggact gcatgacctg gccggcgatc tgcgctacgc ggtccggatg
    11281 ctccggcgct ctcccatctt caccctggtg gccgtgatca cgttgggcct cggaatcgga
    11341 gcgaacacgg ccatcttcag cgtcgtcaat acggtactgc tccagccgtt gccctatccc
    11401 gacccggaac ggctggtgaa ggtgtggggc gaaggccact cccgcgccga attcacccgg
    11461 attcgcgatc gcgcccgcag cttcgagcgc gtggccgcct acctgcccgc atacggcatg
    11521 agcctgagcg gggacggcga cccactgcgg gtcgttacgg cgttggtgag tgcggatttc
    11581 ttcagcctcc tcggcgtgtc gcccgcctcg ggccgtttct tccgccccgg ggaagacttg
    11641 cccggcaccg agccggtggc ggttctgagt ttcgggctct ggcgcgaccg gttcggggcg
    11701 gatccatcga tcgccggccg gaccatcgag ctcgaggggg ttcgctggac tgtgatcggt
    11761 gtggcgccgc gcgagttcgg gttccccgga cccgagaccc ggctctgggt ccccctcaca
    11821 ctcgatgaga aggacgccgg cccgttctgg ggagcgtacg gccaccacct catcgcgcgg
    11881 ctcgcgccgg cagtgacccc ggagcaggcc cgcgccgagg tcgaaaccat cgccgcggcg
    11941 ttacggctgg aaaacccgat ctggcggccc gaccaggatt acactcgcgg catcactgtg
    12001 aactcgctgc aggatcacct cgtggcagac agccgcaggc tgctgggggt gctgttgggt
    12061 gcggtcggcc tggtgctgct catcgcctgc gccaatgtgg ccaatctgct gctggtacgc
    12121 ggcaccgccc gcgagcgcga gctggccatt cgcgcgacgc ttggcgccgg gaccagacgg
    12181 ctcacccgcc agctcctggt agagtgcggc gtgctggccg cgatcggagg agccggtgcg
    12241 ctcgcgctag cggtggcggg gacacgagct ctcatacggt tgcttcccgc gtcgactcct
    12301 cgactggccg acgtatccct cgacggcacc acgctgggat tcaccgtcct tctcactttc
    12361 ctgaccgccc tggcctttgg tctcctgccc gcgttgcggc tggcccggac cgatgcgcaa
    12421 gcgaccctgg caggcgaccg atccacggcg ggcagccacc cccgacggct cgccggcttc
    12481 ctggtgagcg cccagatcgc gctggcggtg gtgctcgcgg tcggagccgg tctcctggtg
    12541 cgaagccttt ccctgctgct cgacgtggat ccgggcttcg agacggcccg cattgccacg
    12601 gcccgggtaa gtccggctca ggctcgcctc cccgaggagg aagcagcgag ggcctactac
    12661 cggcagctgc tcgagggact cgggaccgcg ccgggaatcg agacggccgc catcaccacc
    12721 cagctcccgt tcgaccagac caaccgggtc atggcgatgt ggatcgacgg ctggaccacg
    12781 gatccgaacc ggctcgatct gttcgaggta cgcaaggtct cgcccgagct gttccgcgcg
    12841 atggggattc cgcttcgcaa ggggcggggg ttcagcggcg aagatcatgc gacctcgccg
    12901 cgggtggcca tcgtcagcga gaccgcgctg cgccgcttct gggccggtcg cgagatcatc
    12961 ggcggccgga ttcggtatcc ctggcccggg tggatgacgg tggtcggcgt cgcggccgat
    13021 gtgcggaaca acgatctgcg agagaatccc ctgcccacta tttacatccc cttcgagcag
    13081 gacccggaag tctcggtaac ggtcgtagcc cgggccactg gagatccgcg ccgtgcgctg
    13141 tccgccatcc gggccaccgt caccgctctt tcgcccgacg taccggtcag tgacgccgag
    13201 gccatggagc ggctgatcga acgctcggtg gcggctcccc gttcggcctg cctgctcctg
    13261 atcggattcg ggttgctggc cctggtgctg ggggcggtgg gcacctacgg attgatcgcg
    13321 tacggggtgg aacggcgcac ccgcgagatc gcggtgcgga tggccgtcgg cgcgcgacgg
    13381 aacgcggtgg tgaggatgat cgtgcgcgag ggggctcgcc tggccgggct cggcatcctg
    13441 gccggcctgg tcgtcgcgtt cggcctcgcc cggttcatgc agggtctgct ctacgaagtg
    13501 ggtcccaccg atccagtcgt ctttgcggtc gcgccgctgg tgctgggcct cacggcgctc
    13561 ctcgcctgcc tggtcccggc gctcaaggcc gcgcggatcg aaccctcgat ggcgctcaag
    13621 cgggagtagc aaccgtcgga aaggtgaccc catcgcgggg actcatgacg tcaccctcca
    13681 cccatgtcac cagcaccgag gcgaacaaga gcgacgagcc cagcaggccg gcgcgggctg
    13741 cgatggccga ccccttgacc atgtcgggca ggcgtcgcca gcccctgacg gcgatgatca
    13801 tggtcgccc
//
LOCUS       DASWKS010000382         2134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3173604, whole genome shotgun sequence.
ACCESSION   DASWKS010000382 DASWKS010000000
VERSION     DASWKS010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3173604"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1106)
                     /locus_tag="VGA78_10865"
     CDS             complement(<1..1106)
                     /locus_tag="VGA78_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894417.1"
                     /translation="MIKDGLSSPMGNRRGATLPLVILFLVLLSMSALGGISRVATERR
                     TGGNIRAEVDAFTLAQAGLDRYLSTVTDPPPASLDTTITDVFGGNVSVSVRRLRDIGS
                     GVPALYVVRATATHTAARRYDARTPAAVRSVAQFALWETMRVPGAWTALGGINKSGGS
                     GTLAGADQCGVEPPVSGVAVPITAADGGPGYDQAGGTSVPTGIPPISYPDPTPQEFAN
                     NPLINIDWDGIVNGGAMTFDYNLTSTTGWPASFTSWPSIYVNNTAELSLSPVQSGSGL
                     LVVRRDLKLDGAFSWNGVILVGGKLTSSGTTSVYGGLITGLNLKLGEAVQTSDLGNGT
                     KFIQYNSCHVNNALDKFGTLNVLRNAWVDNWPIY"
     gene            complement(1103..1945)
                     /locus_tag="VGA78_10870"
     CDS             complement(1103..1945)
                     /locus_tag="VGA78_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9894418.1"
                     /translation="MIRRRAGFTLIELLLALILTTVVSGVLVRLLMGDMRFAEDREAW
                     RTARQAARSGLTVLTADLRMLETGAGVEAAAAGGQDITVRIPYAFGVLCSTTGTSSTV
                     TLLPVDSLMFAQPGHSGFAWRDDIPKTYTYVPSSLVTLGAPSGPCTTSGITVLPGSRI
                     IIVDGLVPATLVKGTVFLLYRRIRYQFKPSVIMPGQTALWRTLLSSGTTEEVAAPFDA
                     GARFRFYVGSGTDPQNAVPSPLSDISGLELAFDGRSDRTPRATSGPKVVQFSTAVFFQ
                     NQTQ"
     gene            complement(1942..>2134)
                     /locus_tag="VGA78_10875"
     CDS             complement(1942..>2134)
                     /locus_tag="VGA78_10875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894419.1"
                     /translation="ALTPGTTCYNRSSADFPHYTCVKVTDLNGTTKRLVVVVSPVGAL
                     PDSVIVDKTSGSRYNPLSQ"
BASE COUNT          358 a          653 c          769 g          354 t
ORIGIN      
        1 cagtagatgg gccaattatc gacccaggcg ttccggagca cgttcagggt gccgaacttg
       61 tccagggcgt tgttgacatg gcagctgttg tactggatga acttggtgcc gttgcccagg
      121 tcgctggttt ggactgcttc acccagtttg aggttgagac cggtgatgag gccgccatag
      181 acagaggtgg tgccgctgct ggtcagcttg cctccgacca ggatgactcc attccaggag
      241 aacgcgccat cgagtttgag gtcccggcgc acgaccagca gcccgcttcc cgactggacg
      301 gggctcaaac tgagttcggc ggtgttgttg acgtagatgg acggccagga cgtaaagctg
      361 gcaggccagc ccgtggtgct cgtgaggttg tagtcgaagg tcatggcacc accgttcacg
      421 atgccgtccc agtcgatatt gatcagcggg ttgttcgcga actcctgtgg ggtcgggtcc
      481 gggtaggaaa tcggtggtat gccggtgggc actgaggtgc caccggcctg gtcgtagccg
      541 ggccccccgt cggccgccgt gatcgggacc gccacgccgg acaccggcgg ctccactcca
      601 cactgatccg ctccggcgag ggtgcccgat ccgccgcttt tgttgatccc gccgagagcg
      661 gtccaggctc ccggaacccg catggtctcc cacagggcaa actgggccac gctgcgaacc
      721 gcggccggcg tcctggcgtc gtagcgcctc gcggcggtgt gggtcgcagt ggcacgcacc
      781 acgtagaggg ccgggacacc gctgccgatg tcgcggagcc gccggaccga gacgctgacg
      841 ttcccgccga acacgtcggt gatggtggtg tcgaggctgg cggggggcgg gtcggtcacg
      901 gtcgagaggt accggtcgag gcccgcctgg gccagggtga acgcatccac ctcagcccgg
      961 atgttgccgc cggtgcgacg ctcggtggct acccggctga tgcccccgag tgcgctcatc
     1021 gagagcagga ccagaaagag gataaccagg gggagggtgg cgccccggcg gttacccatc
     1081 ggtgaggaca aaccgtcttt gatcattggg tctgattctg gaagaagacc gcggtggaga
     1141 actgcaccac cttgggcccg ctggtggcgc gtggggtccg gtcgctgcgg ccatcgaagg
     1201 ccagctccag accgctgatg tcggacaagg gcgatggcac cgcgttctga gggtccgtcc
     1261 cgctacccac gtagaagcgg aagcgggcgc cggcgtcgaa cggcgcggcc acctcttcgg
     1321 tggtgcccga ggataagagg gtccgccaga gcgcggtctg gccgggcatg atcacggagg
     1381 gcttgaactg gtatcggatc cggcggtaca ggaggaagac ggtacccttc acgagggtcg
     1441 cgggcaccaa tccgtcgacg atgatgatcc ggctacccgg cagcaccgtg atgcccgagg
     1501 tggtacaggg cccgctcggg gcgccgagcg tcaccaggct gctcggtacg taggtgtagg
     1561 tcttggggat atcgtcgcgc caggcgaagc cggagtgccc cggttgagcg aacatcaggg
     1621 aatccaccgg aagcagcgtc acggtggagc tggtgccggt ggtggagcag aggactccga
     1681 aagcgtaggg gatccggacg gtgatgtcct ggccaccggc ggcggccgcc tcgacgcctg
     1741 cgccggtctc caacatgcgg agatcggccg tgagtaccgt caacccgctt cgggccgcct
     1801 ggcgggcggt ccgccaggcc tcgcggtcct cggcgaaacg catatcgccc atcagcagcc
     1861 gtaccaagac ccccgacacc accgttgtga gaatgagcgc cagcagcagc tcgatcaggg
     1921 tgaaccccgc gcgacgccgg atcattggct cagggggttg taacggctgc cgctggtctt
     1981 gtcgacgatc acggaatccg gcagggcgcc gacgggggac acgaccacga ccagccgctt
     2041 ggtggtgccg ttcaggtcgg tgaccttcac acacgtgtag tgcggaaagt cggcgctcga
     2101 ccggttgtag caggtcgtgc cgggcgtcag cgcc
//
LOCUS       DASWKS010000383         9546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2440701, whole genome shotgun sequence.
ACCESSION   DASWKS010000383 DASWKS010000000
VERSION     DASWKS010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9546
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2440701"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..1476
                     /locus_tag="VGA78_10880"
     CDS             157..1476
                     /locus_tag="VGA78_10880"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEX9894420.1"
                     /translation="MSYRIHALLLLFPVLAQAQVGSPAGPVPPERLAARREALMDRLG
                     TGIAVLQGTSERSIDPPDAEYPQDTDFRQDNDFFYLTGLEVPDAWLVLIARANGPDQV
                     QLFLPARNPAQERWLGVRLGPGPESAAVAGLPARAVRSVEERDRVLDSLLSAADSPVR
                     SGPLFLKHTARLAGSGWQRLVGQVARTENLIPHLAALRVIKDTDEQARLRRAIAISGA
                     GHLAAMRVAAPGVWEYELEAAAEYEFRRLGAERLGYPSIVGAGINSTVLHYDESRAQL
                     KAGDLIVMDMGAEFGYYSADVTRTIPATGRFTDRQRAVYDLVLAAQQAALDSIRPGVT
                     IARLEAIARRVMRERSGSLCGPRTCDAYFIHGLGHYIGMDVHDVGRYDIPLAPGMVFT
                     VEPGIYLPEEGLGVRIEDDVLVTATGYELLSGGVPRKASEIEALMAK"
     gene            1832..2872
                     /gene="coxB"
                     /locus_tag="VGA78_10885"
     CDS             1832..2872
                     /gene="coxB"
                     /locus_tag="VGA78_10885"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX9894421.1"
                     /translation="MTVALFAACGGPFPQSTLIPKGDFAQMVDEVFSATVRWATLVFV
                     LVEGVLIVAILKFRQRPGDAEPTQTHGNTVVEMVWTIIPAAILTFIAVPTVRTIFRTA
                     ELPEGGLEVEVIGHQWWWEFRYPAQQIVTANEMHVPAGRPVIMKIRTADVLHSFWVPQ
                     LSAKRDAFPNKYTTLFFTTDSLGEFTGQCAEFCGLQHGRMGSLVVVQTPDEFAQWVER
                     NQVGSPLINRGVVAADSAAADTARGAGRAAQDSIEAKGRETFLAAGCIGCHAMVGTPT
                     AGVLTLQGPNLSHFGSRRRLAAGMLPNTPENLAAWLRDPQAVKEGSLMKLPRPLTEAE
                     ISTLVAYLRAHQ"
     gene            2889..4715
                     /gene="ctaD"
                     /locus_tag="VGA78_10890"
     CDS             2889..4715
                     /gene="ctaD"
                     /locus_tag="VGA78_10890"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEX9894422.1"
                     /translation="MATSVLDHSDSTAPGHTGLWSWITTVDHKRIGILYGATAFLFFL
                     IGGLEALLIRWQLARPENDFLSPELYNQLFTMHGTTMIFLGVMPLSAMFFNFLIPLMI
                     GARDVAFPRLNAFSYWVFLLGGLFLNFSFLINAAPNAGWFGYANLTSRQYSPGLNIDF
                     WVIGLQILGVASIAAALNFFVTIVNLRAPGMRLMRMPMFVWMSLITQMLLLLAFPVIT
                     VALVFLMADRTFGSSFYTPGGGGDPTLWQHLFWIFGHPEVYILILPAFGIVSEILPVF
                     SRKPLFGYAAMVFSGAFIAFLGFGVWSHHMFSTGMGPVADSVFSLTTMLIAVPTGVKI
                     FNWIGTVWGGSLRLKTPMYFALGFVAMFIIGGLSGVMHSSPPADLQQTDTYFVVAHFH
                     YVLFGGSIFALIAGAYFWFPKMFGVLLDDRIGKLQFWLTFVGMNLTFFPMHFLGLHGM
                     PRRVYTYPSGLGFDLMNLTQTIGSLILGLSFLVMLYNIWKSVREQPRRIAPADPWDAA
                     TLEWSIPSPPQEFNFAEIPTVEHRDELWWRKRKAGGPLPEPARVSGKGIHLPNPSYWP
                     LVTAVGILVFMTGFMAGGVVLNLAGAAILFFGAFRWAFEPTG"
     gene            4740..5390
                     /locus_tag="VGA78_10895"
     CDS             4740..5390
                     /locus_tag="VGA78_10895"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX9894423.1"
                     /translation="MAHAHAGTIHHAEQPSAHTGLETRKLAIWTFIGSECLFFASLIS
                     TYLVYKGKSLIGPLPHESSQCMLHGRLQECEGIFEISLVTVGTAVLLFSSFFVVMALN
                     GAQTGNRRRLIGWLTATVLGGLFFVGMQVYEFTHFFHKGLGYTTNLFGSTFYTLTGFH
                     GTHVTIGVIWLATVLVLAIRGKLPPEKALNLELAALYWHFVDVVWIVIFPTVYLMR"
     gene            5410..5751
                     /locus_tag="VGA78_10900"
     CDS             5410..5751
                     /locus_tag="VGA78_10900"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEX9894424.1"
                     /translation="MDPRAVHKERTHPTAGLYLRVAVVLFVLTALEVYAFEVSRRGSP
                     AGLAAIVSPLIIPILVVLSAAKFALVAMFYMHLKQDATIFSGLFVLPLIIAIVLVMAL
                     IMLFSVVHLMP"
     gene            5938..6933
                     /locus_tag="VGA78_10905"
     CDS             5938..6933
                     /locus_tag="VGA78_10905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894425.1"
                     /translation="MQFRFKDNSGTVISLPDVTSLIRAIRDGLVNPETPFAVDDDRYW
                     HRAETVAAYREAELVLRRLPAGHALLSAPRIKPRKGLRAWRLPPVLLRFAAIGLVAAI
                     AVSIALRFWSPSRASAAPTASLPEASRAEQELVKQLTGDYGTAFARVVRQRQDWLQAQ
                     RLGQRFRGTALKTPESIRAVHQVSHRLRGGADSLVPNSDAVASRLVARAASMARRRSG
                     LDGLTSSLEDQFSDWRTDIEAYAALQLELADGLDAVADFLLTHQQGFAIEEDRTFFLS
                     RADATRYRELLDQLTVLVNRERAWGDAMDRRHPGWLSALPEGERPKPGRPILASK"
     gene            7086..8057
                     /locus_tag="VGA78_10910"
     CDS             7086..8057
                     /locus_tag="VGA78_10910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894426.1"
                     /translation="MLHLRSHVLHGMVGGLAAGFVVALWFFVVDLAAGQLLHTPVLLA
                     RTVLGVDAGDSVAALASPQLALAYTVIHFSVFALLGAVMAIFLAAIKVAPSVLLGAAF
                     GVGVLSGLYYLVLLITGGDVLNVLPAAHVLGANLLGGVVLMAYLHRATRSATDFGPEV
                     LRHHRLLSEGLITGLYGAVAVAVGFLVFDALTRQAFYTPAALGSFLFLGASSPEQVRI
                     SFGVVAAYTMVHLIGFAMVGIAFAWSAERLQRMPSMWLIWLLAFIVAEGVFLGTAGTS
                     GEWVMGTIGWWAIGLGNVLGIAAMAWRVKLAHPALGRRLRETANVRV"
     gene            complement(8239..8730)
                     /locus_tag="VGA78_10915"
     CDS             complement(8239..8730)
                     /locus_tag="VGA78_10915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894427.1"
                     /translation="MRHHHSVLKEGAVAGMLGAFAVAIWFLVLDVYQGRALFTPSVLG
                     QMLLMGRATPATDAIDSTAVALYTVFHFAAFALFGMFVTKLVHLAVNVPVIRFGLVMV
                     FVVFEVFFWGFTYMFFAGTRGLFPRGAILIANTAAAVVMATYLWRRHPSLKRALRHEP
                     LGF"
     gene            complement(8741..8887)
                     /locus_tag="VGA78_10920"
     CDS             complement(8741..8887)
                     /locus_tag="VGA78_10920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894428.1"
                     /translation="MSHDVLSRVMFWVGAMFVFTPMLIVAMVILTARHLRKKQREAGP
                     QPTH"
     gene            complement(8884..9072)
                     /locus_tag="VGA78_10925"
     CDS             complement(8884..9072)
                     /locus_tag="VGA78_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894429.1"
                     /translation="MIHFHRVLIATAILFCAGFSLRSLMVYGATGDSLSLALFVAFLI
                     ATGALGYYLLNLRKFLRL"
     gene            complement(9069..>9546)
                     /locus_tag="VGA78_10930"
     CDS             complement(9069..>9546)
                     /locus_tag="VGA78_10930"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX9894430.1"
                     /translation="LKRRSSLATLVGAIPGALPVVGGWAAASGLPELEAWVLFAIMFL
                     WQLPHFLALAWIYRDDYAAAGLRMLSVGDVEGRATFRQAGLASLALLSAALAPTLVGI
                     AGAAYFWGALLLSGWMVWAAMTAAFTPSVARARRLFRVSVAYLPALLVLMMMDKIP"
BASE COUNT         1486 a         3123 c         3182 g         1755 t
ORIGIN      
        1 aatctacagc ccgatacgta aacagtgaat agggacggac agacggcccg aaagacggtt
       61 tgctccgtcc ggattcgccc cttccggccc accgccgccg tttaccgttc actgttcact
      121 gttcactgtt caccgttcac cgtgctggga gaccacgtgt cctaccgtat tcacgcgctg
      181 ctgctgctgt tcccggttct ggctcaggcc caggttggct cccccgccgg cccggtgcct
      241 ccggagcggc tggcggcccg gcgggaggcg ctgatggatc ggctggggac cgggatcgcg
      301 gtgctgcagg ggacgtcgga acggtcgatc gatcctcctg acgccgagta cccgcaggat
      361 accgacttca ggcaggacaa cgacttcttc tacctcaccg ggctggaggt gccggatgcc
      421 tggctggtgc tgatcgcccg ggccaatggc cccgaccagg tgcaattgtt ccttccggct
      481 cggaatcccg cccaggaacg ctggctggga gtccggttgg gtcccgggcc tgagtctgcc
      541 gcggtggccg gcttgccggc ccgggcggtg cggtcggtcg aggagcggga tcgggtgctg
      601 gattcattgc tcagtgcggc ggattctccg gtgcgttcgg gtccactctt cctcaaacac
      661 accgcccgcc tggcgggatc gggctggcag cgcctggtgg gccaggtagc acgcaccgag
      721 aacctgatcc cgcatctggc tgctttgcgg gtgatcaaag acaccgacga gcaggcccgg
      781 ctgcgccgtg cgatcgcgat atccggggcg gggcacctgg cggccatgcg ggtggcggcg
      841 cccggcgtct gggagtatga gctcgaggcc gcggccgagt acgagttccg ccggctgggg
      901 gcggagcggc tggggtaccc cagcatcgtg ggcgcgggaa tcaacagcac ggtactccat
      961 tacgacgaaa gccgggctca actcaaggcc ggcgacctga tcgtgatgga tatgggggcc
     1021 gagttcgggt attacagcgc cgatgtgacc cgtaccattc cagccaccgg acgctttacc
     1081 gatcgccagc gtgccgtcta cgatctggtg ctcgctgccc agcaggcggc cctggactcg
     1141 attcggcccg gagtgaccat cgcccggctc gaagcgatcg cgcggcgagt catgcgggag
     1201 cggtccgggt cactctgtgg tccgcgtacc tgcgatgcct acttcatcca cgggctggga
     1261 cattacatcg gcatggacgt tcacgacgtg ggacgctacg acatcccgct tgccccggga
     1321 atggtcttta ccgtcgagcc ggggatttac ctgccggagg aagggcttgg ggtccggatc
     1381 gaggacgacg tgctggtgac ggcgacgggg tacgagctgt tgtcgggagg cgtgcctcga
     1441 aaggcaagtg agatcgaagc cctgatggcg aaataaggtt ccgggttccg cgttccgggt
     1501 gcctggtgcg gtgcttgggt gcggtgcaga gtgcccggtg tcacgtgcgt gggcgcaatc
     1561 ggtcgacatt cgcgcagcga ccggagttgc atgatcggca ccacggcacc acggcaccgc
     1621 acccggcacc gcacctggta cctcctggca cccggaacgg ggaacgggac aacatgcact
     1681 cttcttcact tgacctaacc ccgcaccgga tttagccttc cgcgcctgtg accggccggt
     1741 ctccatcact gcgacaccag gtgtttcgtc gaaaatgatt ttgcggacgg gttctcgaga
     1801 gcgggtcggg tggcgagtct ggctcccgct cgtgaccgta gccctcttcg cggcctgcgg
     1861 tggtcccttc ccccagagca cgttgatccc gaagggtgat ttcgcccaga tggtggacga
     1921 ggtattcagc gccaccgtcc gctgggccac tctggtgttc gtgctggttg aaggcgtcct
     1981 gatcgtggcg atcctcaagt tccgacagcg gcccggtgat gccgagccga cccagacgca
     2041 cggtaacacg gtggtggaga tggtctggac catcatccca gccgccattc tgaccttcat
     2101 cgcggtgccc accgtacgga ccatctttcg gacggcggag ctcccggaag gcgggctcga
     2161 agtcgaagtg atcgggcacc agtggtggtg ggagttccgc tacccggccc agcagatcgt
     2221 cacggccaac gaaatgcacg tgccggccgg ccggccggtg atcatgaaga tccgcacggc
     2281 cgacgtcctg cattccttct gggtgccgca gctgtccgcc aagcgggacg ccttccccaa
     2341 caaatacacc acgctcttct tcaccaccga ttcgctgggc gagttcaccg gccagtgcgc
     2401 cgagttctgc gggctgcagc acggccggat gggatccctg gtggtggtgc agacgcccga
     2461 tgagttcgcc cagtgggtcg aacggaacca ggtcgggtcg cccctgatca atcggggcgt
     2521 ggtggcggcc gacagcgcgg cggcggacac cgcccggggg gcgggccggg ccgcgcagga
     2581 cagtatcgag gcgaaaggcc gcgagacctt tctggccgcc ggctgcatcg gctgccacgc
     2641 gatggtagga acgccgaccg cgggggtgct cacgctccag ggacccaact tgagccattt
     2701 cggcagccgg cgccgcctcg cggcgggcat gctgccgaac accccggaaa acctggccgc
     2761 ctggctccgc gacccgcagg cggtcaagga agggtcgctc atgaagctgc cccgcccgct
     2821 cactgaggcg gagatcagca ccctggtggc gtacctgcgg gcccatcagt agaggaaacg
     2881 ctaccgacat ggcgacctcg gttctcgacc actccgactc gaccgccccg ggacacaccg
     2941 ggctgtggag ctggatcacg accgtggatc acaaacggat cgggatcctc tacggcgcga
     3001 ccgcgttcct gtttttcctg atcggagggc tggaagcgct gctgatccgt tggcagctgg
     3061 cccggccgga gaacgacttc ctgtcgcccg agctgtacaa ccagctgttc acgatgcacg
     3121 gcaccaccat gattttcctg ggggtgatgc cgctctcggc catgttcttc aacttcctga
     3181 tcccgctcat gatcggggcg cgggacgtgg ccttcccccg gctcaacgcc ttcagctact
     3241 gggtgttcct gctgggcggg ctgttcctga acttcagctt cctgatcaac gccgcgccca
     3301 acgccggctg gttcggatac gccaacctca cgtcgcggca gtattcgccc gggctcaaca
     3361 tcgacttctg ggtgatcggt ctgcagatcc tgggggtcgc ttcgatcgcc gcggcgctca
     3421 acttcttcgt cacgatcgtg aatctccggg ccccggggat gcggttgatg cggatgccga
     3481 tgttcgtctg gatgagcctc atcacccaga tgctgctgct gctggccttc ccggtgatca
     3541 cggtggcgct ggtcttcctg atggcggacc gcaccttcgg gtccagcttc tataccccgg
     3601 gcgggggcgg cgatccgacc ctgtggcagc acctgttctg gatcttcggc catcccgagg
     3661 tgtacatcct gatcctgccg gccttcggga tcgtgtccga gatcctgccg gtgttctccc
     3721 gcaagccgct cttcggctac gcggcgatgg tgttctcggg cgcgttcatc gcgttcctgg
     3781 gcttcggggt gtggagccac cacatgttct ccaccggcat gggcccggtg gccgattcgg
     3841 tcttctcgct caccaccatg ctgatcgctg tgcccaccgg ggtgaagatc ttcaactgga
     3901 tcgggaccgt ctggggcgga tcgctccggc tcaagacccc gatgtacttc gccctcggct
     3961 tcgtcgccat gttcatcatc ggcgggctct cgggcgtcat gcactcctcg ccgccggccg
     4021 atctgcagca gaccgacacc tacttcgtgg tggcgcactt ccactacgtc ctcttcgggg
     4081 gcagcatttt cgccctgatc gcgggcgcct acttctggtt ccccaagatg ttcggggtgc
     4141 tgctcgacga ccggatcggc aagctgcaat tctggctcac cttcgtgggg atgaacctga
     4201 cgttcttccc gatgcacttc ctcgggctgc acggaatgcc ccgccgggtc tacacctatc
     4261 ccagcggact gggcttcgac ctgatgaatc tgacccagac catcggctcc ctgatcctgg
     4321 gattgtcgtt cctggtgatg ctctacaaca tctggaaatc ggtgcgggag cagccccgcc
     4381 ggatcgcgcc ggccgacccg tgggacgccg ctacgctcga gtggtccatc ccgtctccgc
     4441 cccaggaatt caacttcgcg gagatcccca cggtggagca tcgtgatgag ctgtggtggc
     4501 ggaagcgcaa ggccggcggt ccgctgcccg agccggcccg ggtgagcggc aaagggattc
     4561 acctgcccaa tccgtcgtac tggccgctgg tgaccgcggt cggcatcctg gtcttcatga
     4621 ccggcttcat ggcgggcgga gtggtgctga acctggccgg cgccgccatc ctcttcttcg
     4681 gtgccttccg gtgggccttc gagccgaccg gctgacctga ctacgcaagg atctggatag
     4741 tggcccacgc ccacgccggg acgatccatc acgcggaaca gccctcggcc cataccgggt
     4801 tggagacccg caagctggcg atctggacct tcatcgggtc ggaatgtctc ttcttcgcgt
     4861 cgctgatctc cacctatctg gtgtacaagg gcaagagcct gatcggtccg ctgccgcatg
     4921 aaagttcgca gtgcatgctg cacggccggc tgcaggagtg cgaggggatc ttcgagatct
     4981 ctttggtcac ggtcggcacc gcggtcctgc tgttcagctc gttctttgtg gtgatggcgc
     5041 tgaatggcgc ccagaccggg aaccgccgcc ggctgatcgg ctggctgacc gccaccgtgc
     5101 tgggtggtct cttcttcgtg ggaatgcagg tgtacgagtt cacccatttc ttccacaagg
     5161 ggctcggcta caccaccaat ctgttcggtt ccaccttcta caccttgacc gggttccacg
     5221 gcacccacgt gaccattggc gtcatctggc tggccaccgt gctggtgctg gccatccggg
     5281 gcaagctgcc gcccgagaag gcgctcaacc tggagctggc cgccctctac tggcacttcg
     5341 tggacgtggt ctggatcgtg atcttcccca ccgtttacct gatgaggtga gtgccggctt
     5401 atggacttga tggatccccg cgccgttcac aaggagcgca cccaccccac ggccgggctg
     5461 tatctcaggg tcgcggtggt gctgttcgtc ctcaccgcgc tcgaggtcta cgccttcgag
     5521 gtatcgcgcc gcggcagccc ggctggtctc gcggcgatcg tcagcccgct tatcattccc
     5581 atcctggtgg tactctccgc cgccaaattc gctctggtgg cgatgttcta catgcacctc
     5641 aagcaggatg ccaccatctt cagcggcctg ttcgtccttc cgctgatcat cgcgatcgtc
     5701 ctggtgatgg cgctgatcat gttgttcagt gtggtgcatc tgatgccgta accggtcggc
     5761 gataaacggc aaccccgact ggtgactcgc gactaggtgc gcaggttgcc aatcaccccg
     5821 ccccaagcct ccgacgttcc gctcgagcac tcggtcgaac tggttgtcct gcaacgcgtt
     5881 atgggtgttg cgccaaggcc gcgccaggcg ggtacgccgc ttgcgacccg gggcctcatg
     5941 caattccggt tcaaggacaa ctccggcacg gtcatctcgc tgcccgacgt aacctcgctc
     6001 attcgagcga tccgggacgg gctggtgaat cccgaaactc cgttcgcggt ggacgacgat
     6061 cgctactggc atcgggccga aaccgtggcc gcctaccggg aagcggaatt ggtgttgcgc
     6121 cggctgccgg ccggtcatgc gctgttgtcg gcgccacgca tcaagccccg gaagggtctg
     6181 cgcgcgtggc gcctgcctcc cgtcctgctt cgtttcgccg cgatcggcct cgtggccgct
     6241 attgccgtct ccatcgccct gcgcttctgg tcgccttctc gcgccagtgc tgcccccacg
     6301 gcctcgcttc cggaggcatc ccgcgccgaa caggagctgg tcaagcagtt gacgggcgac
     6361 tacggaaccg ccttcgcgcg ggtggtgcgc cagcgccagg actggctcca ggcccagcgg
     6421 ctgggccagc gctttcgggg tacggccctc aagacgccgg agtccatccg tgccgtgcac
     6481 caggtatctc atcgtctgcg gggtggtgct gacagcctgg tgccgaacag cgacgcggtg
     6541 gcgagcaggc tggtggcccg ggcggcgtcg atggcgcgga gacgtagcgg attggacggt
     6601 ctgaccagct cgctggagga ccagttctcc gactggcgaa ccgacatcga ggcctatgct
     6661 gcgctgcagc tggagctcgc cgacggcctc gacgcggtgg ccgatttcct cctgacccac
     6721 cagcagggat tcgcgatcga ggaggaccgg accttcttcc tcagccgggc cgacgccacc
     6781 cgctaccgcg agctgctgga ccaactcacc gtcctggtga atcgggagcg ggcctggggt
     6841 gacgcgatgg accggcggca tccggggtgg ctgagcgcct tgccggaggg ggaacggccg
     6901 aaaccgggtc ggcccatcct ggcctcgaaa taggccgcta cagcagcgct tatcgatccg
     6961 aagccccggc ggcccgacgc cggggctttc atgttgtgca gtgccagcca gcgaccaaag
     7021 gcgtgtgact ggcgacattc gccgcgcggg tgtagttctc aagggtccgc aacgcgaggc
     7081 gtcgcatgct acacctgcgc tcgcatgtgc tgcatggtat ggtcggcgga ctggctgccg
     7141 gcttcgtggt tgccctctgg ttcttcgtgg tcgatctggc cgcgggccag ctgcttcaca
     7201 ccccggtgct attggcgcgc accgtcctcg gggtcgacgc gggagacagc gtggctgcac
     7261 tcgccagtcc gcagctggct ctggcgtaca ccgtcatcca cttcagcgtg tttgcgctcc
     7321 tgggcgccgt gatggcgatc ttcctggcgg ccatcaaggt ggcgcccagc gtgctgctgg
     7381 gtgcggcgtt cggggtgggt gtcctcagcg gcctgtacta cctggtgctg ctgatcaccg
     7441 gcggcgacgt gctgaacgta ctgccggccg cgcacgtgct gggtgccaac ctgctgggcg
     7501 gggtggtgct gatggcgtat ctgcaccgcg ccacccgttc cgccaccgac ttcggaccgg
     7561 aggtgctgcg gcaccaccgc ctgttgagtg aagggttgat caccggtctg tacggcgcgg
     7621 tcgcagtggc ggtggggttc ctggttttcg acgccctgac ccggcaggcc ttctacacac
     7681 cggccgcgct gggctcgttc ctgttcctgg gcgcctccag ccccgagcag gtccggatct
     7741 cgttcggcgt ggtcgccgcc tacaccatgg tgcacctgat cgggttcgcc atggtgggta
     7801 tcgcgttcgc ctggagcgcc gagcggctgc agcggatgcc gagtatgtgg ctcatctggc
     7861 tgctggcgtt catcgtggcg gagggggttt tcctcggcac ggcgggcacc tcgggcgagt
     7921 gggtgatggg aaccatcggc tggtgggcca tcggcctggg caatgtgctg gggatcgcgg
     7981 caatggcctg gcgggtcaaa ctggctcacc cggcgctggg ccggcggctg cgggagacgg
     8041 cgaatgtgag ggtctagtca acggtcaacg gtcaacagtt aacggtgacc gtcaccccgc
     8101 accctgtgtc aggagatgtt cgcagtcggt tggtcgagat gaggtagccc cgctgtcccg
     8161 gtcgggactg gcggggctac ggtttttcgg gtggagcaga ctgttgaccg ttgaccgttg
     8221 agcgttgacc gttgaccgtt agaaccccaa cggctcgtgc cgcagggccc gtttgagact
     8281 ggggtgacgc cgccagaggt acgtggccat gaccacggcg gcggcggtgt tggcgatcag
     8341 gatggcgccg cgggggaaga ggccgcgggt cccggcaaag aacatgtagg tgaagcccca
     8401 gaagaacacc tcgaagacca cgaacaccat caccagcccg aaccggatca ccggcacatt
     8461 gacggccagg tgcaccagct tggtcacgaa catcccgaac agcgcgaagg cggcgaagtg
     8521 gaacacggta tagagcgcca cggcggtgct gtcgatcgcg tcggtggcgg gcgtggcgcg
     8581 ccccatcagc aacatctgcc ccagcacgct cggcgtgaac agggcccgtc cctggtacac
     8641 atccagcacc aggaaccaga tcgccacggc gaacgcgccc agcatgcccg cgacggcgcc
     8701 ttccttgagg accgagtggt ggtgccgcat gggactccct tcagtgggtc ggctgaggtc
     8761 cggcttcccg ctgcttcttg cggaggtgac gggcggtgag gatgaccatg gcgacgatca
     8821 gcatcggggt aaagacgaac atggcgccca cccagaacat gacccgggac agcacgtcgt
     8881 ggctcataag cggaggaact ttcggaggtt gagcaggtaa tagcccaggg ccccggtggc
     8941 gatcagaaac gcgacgaaca gggccagcga gagcgagtct ccggtggcgc cgtagaccat
     9001 cagcgagcgg agcgaaaagc cggcacagaa caggatcgcc gtcgcgatca ggacccggtg
     9061 gaagtggatc atgggatctt gtccatcatc atcagcacca gaagcgccgg caggtaggcc
     9121 accgacaccc ggaacaggcg gcgggcccgc gccaccgacg gggtgaacgc ggcggtcatc
     9181 gccgcccaga ccatccagcc ggagagcagc agggcgcccc agaagtacgc cgcgcccgct
     9241 atcccgacca gggtgggcgc caacgcggcc gacaacagcg ccaggctggc cagacccgcc
     9301 tgacggaagg tggcccggcc ctcgacatcg ccgaccgaca gcatccggag cccggcggcg
     9361 gcgtagtcgt cgcgatagat ccaggccagc gccaggaaat ggggcagctg ccacaggaac
     9421 atgatcgcga acagcaccca ggcttcgagc tccggcaggc cgctcgccgc cgcccagcct
     9481 ccgaccaccg gcagcgcacc cggtatcgct cccaccagag tggcgagcga gctgcgccgc
     9541 ttgagc
//
LOCUS       DASWKS010000384         1513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_939606, whole genome shotgun sequence.
ACCESSION   DASWKS010000384 DASWKS010000000
VERSION     DASWKS010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939606"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VGA78_10935"
     CDS             <1..184
                     /locus_tag="VGA78_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894431.1"
                     /translation="ELLVINDASQRLFLQGASSFELKSEAERQGMTPMRRDGMMKVKE
                     GITTPAEVIRNVFALD"
     gene            211..1410
                     /locus_tag="VGA78_10940"
     CDS             211..1410
                     /locus_tag="VGA78_10940"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9894432.1"
                     /translation="MSNDGKESRGVLDVASEEAAERTLWQRELTILDLSRTRRQLDLA
                     KYFPSLLGPRPKDVILFSRQLATLVDSGVALTAGLQLLGTQIGNKYLRRVLGEIEDEI
                     HMGTSLSAAMAKHPVAFSELYCRMIETGERSGNLGPAMRQLADYEERIQVTLAKVRGA
                     MAYPLFVLVLAVFVVAILVKVALPPMVRLFEEFSAELPWPTRFLIAITNFFGEYGLAL
                     LIGAAVLSVVLFLFSRRSSGRLLLHRLVLRVPLLGKISIHGAVARLSRTLSALIKAGL
                     ALPEALALSKETIGNLILQEAMENVRQETLQGRGLSEPLSRVKQFPPMMSYLARVGEE
                     TGTLDTHLATVADFYEQEVDRSLRVMTTVLEPALIIVVGLVVGFVAVSIMMPMYNLLG
                     AVQAGIP"
BASE COUNT          262 a          467 c          479 g          305 t
ORIGIN      
        1 tgagctgctc gtgatcaatg acgcctctca gcggctcttc ctgcagggcg ccagttcttt
       61 tgaactcaaa tccgaggccg aacggcaagg aatgaccccg atgcggcggg acggcatgat
      121 gaaggtcaaa gaagggatca ccactcccgc cgaagtgatc cgcaacgtgt tcgcattgga
      181 ctgatcgaaa tggcctaccg atatttggca gtgagcaatg atgggaaaga gagccgcgga
      241 gtgctcgatg tggccagcga agaggccgcc gagcgcacgc tctggcagcg cgagctcacc
      301 atcctcgatc tcagccggac acgccgccag ctcgatctgg ccaagtactt ccccagcctg
      361 ctgggtccgc ggcccaaaga cgtgatcctg ttctcgcggc agctggccac gctggtcgat
      421 tccggagtag ccctcaccgc cggcctgcag ctgctcggta cccagatcgg caacaaatac
      481 ctgcgccgag tgctcggcga gatcgaggac gagatccaca tgggcacctc gctctcggct
      541 gccatggcca agcacccggt ggcgttctct gagttgtact gccgaatgat cgagaccggc
      601 gagcgcagcg ggaatctggg cccggccatg cgacagctgg ccgactatga agaacggatc
      661 caggtcaccc tggccaaggt tcggggtgcc atggcctacc ccttgttcgt gctggtgctg
      721 gcagtctttg tggtcgccat cctggtcaag gtggcgctgc cgccgatggt ccggcttttc
      781 gaagaattca gcgccgaact gccctggccg acccgcttct tgatcgcgat caccaacttc
      841 ttcggagagt atggactggc cctgctgatc ggcgcagcgg tgctcagcgt ggtcctcttc
      901 ctattctcac ggcgatcctc cggccgcctg ctgctgcacc ggcttgtgct ccgggtaccg
      961 ctgctcggca agatcagcat tcatggtgcg gtcgcccggc tctcccgcac cctttcggcc
     1021 ttgatcaagg ccgggctggc cctcccggag gccctcgccc tcagcaagga aacgatcggt
     1081 aatctcattc tgcaggaggc aatggagaac gtgcgccagg agacgctgca gggccgcggt
     1141 ctctccgagc ccttgagccg ggtcaagcag tttccaccga tgatgtctta cctggcccgg
     1201 gtgggcgaag agaccgggac tctcgacacc catctggcga ccgtggccga cttctatgag
     1261 caggaggtcg atcgatcctt gcgagtgatg accaccgtgc tggagccggc cttgattatt
     1321 gtggtcgggt tggtggtcgg gttcgtcgcc gtgtcgatca tgatgccgat gtacaacctg
     1381 ttgggcgcgg ttcaggcggg gattccatga acaagctcgt ccgattgatc cgggatgaac
     1441 gcgggatctc gctgcccgag gagctcctat cgatcgcgat gctggcgctc tcggtcggtt
     1501 tggtggtcgt tgg
//
LOCUS       DASWKS010000385         3420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_939736, whole genome shotgun sequence.
ACCESSION   DASWKS010000385 DASWKS010000000
VERSION     DASWKS010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939736"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            261..926
                     /locus_tag="VGA78_10945"
     CDS             261..926
                     /locus_tag="VGA78_10945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894433.1"
                     /translation="MIQPDARSRLTPEDVALVLRWSWGGPVPREEVDLWLEADDLDEL
                     LDRPALAERMQAEPVAGPSASLFFYVLVRQALLSRGVDDRRLADYCAALLREFGLRDR
                     SQRVARIDDHRHRYLVDILADLAASQGDRQFTVLVHLGNYALWTAGIFPAWIEARRDR
                     RGGPDLSYYDALGTRGFAEASDHWLASRVGLEDVLRTAADQFGEVRTALNDVSERIRL
                     RAA"
     gene            1303..2748
                     /locus_tag="VGA78_10950"
     CDS             1303..2748
                     /locus_tag="VGA78_10950"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEX9894434.1"
                     /translation="MTEIPNYIDGDLVPPGSGCYLDKLDPATGQPSARVPASDAADVD
                     RAVNAAGAAFPDWADTPAAERSRLLLRIAELIERDLEGLAQAESRDTGKPLALARRLD
                     IPRASANFRFFATAILHTHTESHATDLTALNYTLRRPRGVAGLISPWNLPLYLLSWKI
                     APAIATGNTAVAKPSELTPSTAAMLGALCREAGLPPGVLNIVQGAGGEAGAALVAHPL
                     VRAISFTGGTRTGAEIARTAAPQFKKLTLELGGKNPTLVLADADLDRVVPEVLRSSFT
                     NQGQICLCGSRVLVERPLYQAFLERFAAGARSLRVGDPLDATTDQGAVVSAAHRDKIL
                     GYIELARQEGGTILCGGGPPPELPPRCREGFFVSPTVIAGLGMGCRVNQEEIFGPVVT
                     VTPFEGDAEATRLANDSSYGLAASVWTGDLTRAHRLAESIACGTVWVNCWLLRDLRVP
                     FGGMRQSGVGREGGEEAIRFFTEAKNVCVKL"
     gene            2926..3339
                     /locus_tag="VGA78_10955"
     CDS             2926..3339
                     /locus_tag="VGA78_10955"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEX9894435.1"
                     /translation="MIESSRAPEPVGPYPHARRAGPLLFLSGIGPRTRDSREIPGVSL
                     GSEGQVVAYDFERQCRSTLENIKTVLDEAGASLEQVVDVTVFLTNMQDDFATLNRVYG
                     EYFRGTRPARTTVEVTRLPTPIAVEMKLVAWLGET"
BASE COUNT          555 a         1130 c         1152 g          583 t
ORIGIN      
        1 aactgtatac atgcacgacg aacccgggac agccgaaggg cgtcgtgacc aagccggatg
       61 aactgacgga ggtggcccgg aaccgagtcg cgcaccagtc cggggtcgag ggtcccaata
      121 tcctttgcgg gttcccccgc cgcaagatca tccacgactt tgggttgccg tgtgatattg
      181 acagtgcgga ttgaaacatc ccacactggg tgggaccctg gcactgctta tgcaaccggt
      241 gttgaccggg ggaacgatcg atgatccagc ccgatgcccg cagccgcctg acgccggagg
      301 atgtcgccct ggtgctccgt tggagctggg gcgggccggt gccccgcgag gaggtggact
      361 tgtggctcga ggcggacgac ctcgatgagc tgctggaccg gccggccctg gcggaacgga
      421 tgcaggccga gcccgtcgcc ggcccctcgg cctccctgtt cttctatgtc ctcgtacggc
      481 aggccctgct ctcccgcgga gtcgacgacc gccggctggc cgactactgc gccgcgttgc
      541 tgcgggagtt cggactgcgg gaccggtccc agcgcgtggc ccgaatcgac gatcaccggc
      601 accgctacct ggtcgacatc ctggccgatc tcgccgcctc ccagggcgac cggcaattca
      661 cggtgctggt gcacctcggc aactacgccc tctggaccgc cggaatcttc ccggcctgga
      721 tcgaagctcg ccgcgatcgt cggggggggc cggatctctc ctactatgac gcgctcggta
      781 cccgcggctt cgccgaggcg tccgatcact ggctcgccag ccgggtgggg ctggaagacg
      841 tgctgcgcac cgccgccgac cagtttggtg aggtacgcac cgcgctcaac gacgtgagtg
      901 agcggattcg cctgcgggcg gcatagcact ggttcccggt cgcggcacct ggcatcgatc
      961 cggcgcgcct gaccaattca tctgcagttc acaccgatga ccaagcttgt tggccggttt
     1021 gctcgacctc ggcagccgtc agttgagtca agcgtcaggt gaatcatcgg ccgcatcggc
     1081 ggcatctgcg gatactgcca tcgatccgcc aaatcaggat ccggggtccc tgaccaattc
     1141 gtccgcggat tgcgcagcgg gatagcttca cagatggcgc cgattaccaa gcctgttgtc
     1201 cgaccccggc agcaaagcac tcagtctcaa gcgcttcgtg agcgatcggc gtaatcggcg
     1261 gcatctgcgg aaaacaaacg cctctgtatt agtttgaccc cggtgaccga gatccccaac
     1321 tacatcgacg gcgacctggt gccccctggg tccgggtgct atctcgacaa gctcgatccc
     1381 gccaccggac agccgagcgc ccgagtgccc gctagcgacg ccgccgacgt cgatcgggcg
     1441 gtgaacgcgg ccggggcggc attccccgac tgggccgaca ccccggcggc ggagcggtct
     1501 cgcctactgc tccggatcgc ggagttgatc gagcgggacc tcgaagggtt ggcccaggcg
     1561 gagtcgcgcg acaccggcaa gccgctcgcg ctcgcccgac ggctcgacat ccctcgcgct
     1621 tcggccaatt tccggttctt cgctaccgcc attctgcaca cccacaccga gtcgcacgcc
     1681 actgatctga cggcgctcaa ctacaccctg cggcgacctc gcggtgtggc cgggctgatc
     1741 tcgccctgga accttccgct gtatctgctc tcctggaaga tcgcgcccgc gatcgcgacc
     1801 gggaataccg cggtggccaa gccctccgag ctgaccccgt ccacggccgc gatgctgggg
     1861 gcgctgtgcc gcgaggccgg cctgccgccg ggagtgctca acatcgtgca gggagccggc
     1921 ggggaagccg gtgcggccct ggtcgcgcac ccgctggtca gggccatctc cttcaccgga
     1981 ggaaccagga ccggcgccga gatcgcgaga acggcggcgc cccaattcaa gaagctcacc
     2041 ctggaactgg ggggaaagaa tccgaccctg gtcctcgccg atgcggatct ggatcgggta
     2101 gtccccgaag tgctccgctc cagcttcacc aatcagggcc agatctgcct gtgcggatct
     2161 cgggtcctgg tcgagcggcc gctctaccag gcattcctcg agcgcttcgc tgccggggcc
     2221 cgctccctgc gggtgggcga tccgttggac gcgaccaccg atcagggcgc ggtagtctcg
     2281 gccgcgcatc gggacaagat tctcggttac atcgagctgg cgcggcagga aggaggtacg
     2341 atcctctgcg gcggaggtcc gcctccggag ctgccgcccc gatgccggga agggttcttt
     2401 gtatcgccca cggtgatcgc cggtctcggg atggggtgcc gggtgaacca ggaggagatc
     2461 ttcggaccgg tggtcaccgt gaccccgttc gagggcgacg ccgaagccac gaggctggcc
     2521 aatgacagca gctacggctt ggcggcctcg gtctggaccg gcgacctgac ccgggcccac
     2581 cggctggcgg agtccatcgc ctgcggcacg gtatgggtca actgctggtt gctgcgagat
     2641 ctccgggtac ccttcggagg catgagacag agcggggtgg gccgggaggg aggggaggag
     2701 gccatccggt tcttcaccga ggcgaagaat gtgtgtgtca agctttaggg ttccgggttc
     2761 cacgttccgg gtgccgggtg cggtgcaccg tgcggtgcta cgtgccgggt gttacgtgca
     2821 tgcaagccgg aaggttgcga aggtacctgg cacccggcat gcagcgccgc acccggcacc
     2881 gcacccaatt cggaacctgg aacttggaac ccggaacgtg ctgccgtgat cgaaagctcc
     2941 cgcgcccccg agccggtcgg tccctatccc cacgcccggc gggcggggcc gctgcttttt
     3001 ctgagcggaa tcggtcctcg cacgagggac agccgcgaga ttccgggcgt gtcgttggga
     3061 tcggagggac aagtcgtcgc gtacgacttc gagcggcaat gtcggagcac actggagaat
     3121 atcaagaccg tattggacga ggcgggcgcc agcctggagc aggtggttga tgtcacggtg
     3181 tttctgacca acatgcagga tgatttcgcg accttgaatc gggtctacgg cgaatacttc
     3241 cggggcaccc ggccggcccg caccacggtg gaagtgaccc ggcttcccac cccgatcgcg
     3301 gtggagatga aactggtggc gtggctggga gagacctgag cccaccgtta tcagcggtcc
     3361 cactgatcca gcggccggct gtcgctccgg tatatctccg gcacctgcca tggggtatct
//
LOCUS       DASWKS010000386         9293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_196881, whole genome shotgun sequence.
ACCESSION   DASWKS010000386 DASWKS010000000
VERSION     DASWKS010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9293
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196881"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..631)
                     /locus_tag="VGA78_10960"
     CDS             complement(230..631)
                     /locus_tag="VGA78_10960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894436.1"
                     /translation="MRASAGRGARESLEALAAAVPVPIAGIAIRACPALPPTTEERIA
                     DNRAQTLADSVMYREALATAAEARGWSVHWYDRERVFHDAAAALGREDVDAFLHAMGR
                     SIGPPWQAKHKLAAAAALAATGRPALPPTAG"
     gene            complement(866..2187)
                     /locus_tag="VGA78_10965"
                     /pseudo
     CDS             complement(866..2187)
                     /locus_tag="VGA78_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611236.1"
                     /note="programmed frameshift; incomplete; partial in the
                     middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(2500..3354)
                     /locus_tag="VGA78_10970"
     CDS             complement(2500..3354)
                     /locus_tag="VGA78_10970"
                     /inference="COORDINATES: protein motif:HMM:NF013260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9894437.1"
                     /translation="MIGPPGAGKTMLARRLPTILPALTLNEALETTAVHSLAGLLPPG
                     RSARPTIPSAMRASSAAAPLRGRVKSVWPRAGVLFLDVLPEFRRHVLEVLRQPLEDGV
                     VCLSRAAVSLSYPARFMLAAAMNPCPCGWRGDPTRECHCNPLAIERYLGRISGPLLDR
                     IDIHLAVPAVAWQDLAVKSEPEEPSSAIRDRVEQARAIQRERFQGRPSVRANAHMTAR
                     DIRHHCRLQPDAESLLRTAMSRLALSARAYHRVLKIARTIADLAGAGELEPAHVAEAI
                     QYRALDRR"
     gene            complement(3354..4424)
                     /gene="ugpC"
                     /locus_tag="VGA78_10975"
     CDS             complement(3354..4424)
                     /gene="ugpC"
                     /locus_tag="VGA78_10975"
                     /inference="COORDINATES: protein motif:HMM:NF008653.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX9894438.1"
                     /translation="MATVTLEGVRKIYPDRGKPSVAVHQFDLAVADGEFVVLVGPSGC
                     GKSTTLRMIAGLESISEGTLRIGERVVNDVPARDRDIAMVFQNYALYPHMTVHQNLAF
                     ALTLRKLPRREVDARVRETADLLGLREMLDRRPRQLSGGQRQRVALGRAIVRQPQVFL
                     FDEPLSNLDAKLRVQMRREIAALRRRLGTTTIYVTHDQVEALTLGDRIVVMRDGRVLQ
                     VDTPSVIYQRPADTFVATFIGSPPMNLLRGRLVNGVFHHESGDFELPIRAPGAPDQPV
                     IAGLRPEAVRLVPPGEGAAAEVNLVEPLGSETLVTLGAGSVVIVVRVEGTTPVKLGDR
                     VGVSVASDAVHWFDAVRETRIS"
     gene            4442..5794
                     /locus_tag="VGA78_10980"
     CDS             4442..5794
                     /locus_tag="VGA78_10980"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008422 - beta-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH1 family beta-glucosidase"
                     /protein_id="HEX9894439.1"
                     /translation="MDDPIRFPAGFLWGAATSAYQIEGSPLADGAGASIWHRFSHTPG
                     RTANGDTGDIACDHYRRYAGDVGLMKELGLGAYRFSLAWGRLLPEGVGPINRAGLGFY
                     DRLVDLLLEQGIQSMITLYHWDLPAALDDRGGWLNRDIAQWFADYARVAVEALGDRVS
                     YWVTLNEPWVVTDGGYFHGVLAPGHQSRFEAPIASHHLLLAHGTAMQAIRAEGGRQAG
                     LVVNLEPKYPASDSAEDIQATGRADAYMNRQYLDPVFRGEYPAELSELFADAWPGWPD
                     RDFELIRQPLDFLGINYYTRAVTRHDPGVELTRAATVPQPRQTHTAMDWEVRPESLTD
                     VLLWVRQRYGSLPLFVTENGAAFYDPPVANGPQVDDPLRVAYLADHLRAAAQAVAQGV
                     DLRGYFAWSLLDNFEWSEGYSKRFGLIHVDFETQRRTPKASARFYADVIRSNGAVLYA
                     "
     gene            complement(5969..>9293)
                     /locus_tag="VGA78_10985"
     CDS             complement(5969..>9293)
                     /locus_tag="VGA78_10985"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894440.1"
                     /translation="SDTGGGYSAWRDLALTRWSADWAAEAQGFLLLIRSIDQGHWWRA
                     GSSQDRSCLVTTRLEVAVAPDADIELRRLTLGNSASTAQRLELTSYVEVALNHPAADA
                     GHPAFSKLFVQTEQVPPAILLAHRRPRGPEEAASWMGHSLWIEGDTMVPLQFETDRAR
                     FIGRGRTLADPAALDRGPRFSGTVGNVLDPILSLRCEVVIEPGETRQFVWSLAAGDSR
                     EAVLALLDRDRAAGPDPVFQRARTVILPGTAFPPPTTGGRFRAAAEAFPPRPPRRPQA
                     EPLRFSNGWGGFTQDGSEYVLTLEWENDRLRLPPLPWANVVANEVAGFVASERGAGYT
                     WSENSRENRLTPWSNDPVSDPHGEALYLRDEEQDVYWSPLPGPAPGPDGYEVRHGFGY
                     SIWRHSSMGLEQEVVAFVPRHDPLKLTRLRIRNPGSKTRKLSLIAYVEWVLGGLRTDT
                     AGSIVTRHDAETGAIFATNPERVEWAGRVAFFSVLRPREVGEAEVTTDRRSFLGPGGS
                     VARPAAVLTDAPLDHQTGAGLDPCAAFRAGFHLAPGEQVEFTLALGEGGSEEAARRLL
                     HRFRDAAAVTEALDGIRAFWRDVVTRVQVSTPVPAIDLMVNGWLCYQNLSCRVWARSA
                     LYQSGGAFGFRDQLQDAAALTHALPELTRSQILLHAAHQFPEGDVLHWWHPPSSKGIR
                     TRFSDDLLWLPYVVCGYLRHTGDLGLLDEPVRFVAARELVSGEDEAYLEPQRISQSTT
                     LYDHCCRAVDRSLTHGVHGLPLMGSGDWNDGMNRVGREGRGESVWLGFFLYRILEEFT
                     PWCEGRGDESRVVRYRGYQASLAEALNDAGWDGEWYRRAYYDDGSPLGSASSDECRID
                     AIAQAWAVISRAAPADRAAKALDAADRHLVAPADGIIRLLTPPFDRTAHDPGYIKGYL
                     PGVRENGGQYTHGALWLVRALAEAGRVDRAAQLLEMLSPVTRAATPEAVSVYRVEPYV
                     VAADVYGETPHLGRGGWTWYTGSAGWMFRVALESILGMTVDQGKEIVLRPRIPADWPG
                     YSIRYRLPDGETVYDLRVTQSSPRPGATAAEVDGRALMAHEGAVRIPLVRDGTLHRVT
                     VRLGSDLTVAPGGLCPAAS"
BASE COUNT         1537 a         3197 c         3067 g         1492 t
ORIGIN      
        1 gcttgtagtt agggagtgga tctacaccga cccccttgag catgatcatc gcgccacccc
       61 tgcacacgat gccaaagaat ggatcgtcag cgggctcctg aaaagtgatc tcaaatccaa
      121 gctggtcgcg ataaaacgag agtgctgccg ttgcgtcatg cacgatgaag aagggtgaga
      181 tgcctgaaat ctgtggtcgt gtcatatgga tacccttcgg ccgtgcatgt tatccggcgg
      241 tcggcggcag cgcgggccgc cctgtggccg caagcgccgc agctgccgca agcttgtgtt
      301 tggcctgcca aggcggcccg atcgatcggc ccatcgcgtg caggaaagcg tcgacgtcct
      361 cgcggccgag cgccgccgcc gcgtcgtgaa acacgcgctc gcggtcgtac caatgcacgg
      421 accagccacg cgcctcggct gcggtcgcga gtgcctcgcg atacatgacg gagtcggcga
      481 gggtctgcgc gcgattatcg gcgatccgtt cctcggtcgt cggcggaagc gcggggcacg
      541 cgcggatcgc aatgcccgca atcggcacgg gcaccgccgc ggccagcgcc tcgaggctct
      601 ctcgcgcgcc gcgcccggcg gacgcgcgca cacgctcgac gagcggaacc tgtcaaggag
      661 tttgagacac gagagggact gagtttactg agcaatcgtc ctcggcatcc cactcgctgg
      721 cattgacggt cacccccgca accagctgcg atggcctcac ctggggggga ctgcggtctc
      781 cccccgactg ccgatcgtcg atcctggggc gattgggcgc gtcgatcggg ggcgcgtcgg
      841 gagcaatccg gggcgcgggc ccgatccggg gctgattgat ccacaccgcg gtcggcaagg
      901 cgggcggtgt aggggcgtgg cggacgaacc gtgcgggggt ggccgcgtag gcggccgcga
      961 gcaccgccgc gcggtgggtc tggcgggccg ccgcgtggcc gtggtggaca tcgcgtggcg
     1021 tatgccagcc gagactggca tggtggtgtt cggtgttgta ccacgggaaa aatgcggcgc
     1081 agtgcgcccg gccgtgctcg aacgagccga agcggtccgg gaagctcggg tggtacttga
     1141 gggtcttgaa ctgggcctcg gaatacgggt tgtcgttgga gacgtgcggg cgcgagtggg
     1201 tcttggtgat cccgaggtcc gccagcagga acgccaccgg cttcgagatc atggcggcgc
     1261 cccgatcggc gtggacggtg agttgtcccg gcgcgatgtc ctcgcgggcg accgtcgcgg
     1321 cgatcaggcg ccgggccaag ctcgccgatt cgcgatgggc gaggagccag cccaccacgt
     1381 agcggctgaa cacgtcgagc aggacgtaga ggtagtacga cgtccacttg gccgggcccc
     1441 gcaacttggt aatatcccaa ctccacagct gattcggcgc ggtggccagg agctccgggg
     1501 ccgcataccg cggatgccgg cactgatccc gccgctcccg gacctcgccc gccgtcgcga
     1561 ggagccggta catcgtgcgt tcggagcagt agtaggtgcc ttcgtcgagc aacgtcgcgt
     1621 agacctggcc cggcgcccga tcggcgaacc gcggctcgtg caagaccgcg aggacccgct
     1681 gctgctcccc cggcgtcagc gcccgcggcc cgccccggcg gggccggcgc ggcggcgccg
     1741 ggccgcgctg ccggtagtag gtggcccggg gcacccggag cgcgaggcac agcgccagca
     1801 cgcctaacgt cgggccccgc tcggcaatcg tctgcatcac gacggctcgc tcggggtgag
     1861 cgggctcggg aagagcgccg cgagtttttt ttggatctcg acaatggcct cggcccgttc
     1921 ggcccgcttc agcgccgccg ccagctggcg ctcgagctgc gccacccgcg ccgcgtgtgg
     1981 attcggcgcc cggcgcggcg ggccccggcg gcgacccggt ccagcgagat cgccccgccg
     2041 ctgcgccgtg cgccaggccg ccaagtgcga gctgtacaac ccctcgcgcc ggagcagcgc
     2101 cccgagctcc ccgggcttcg tggcctgggc ggcctcctgc aacaccttca gcttgtacgc
     2161 ggccgtgaac cgtcggcgct gggctttctc gggcatgcca ccatcatggg tcttctcacc
     2221 accaacagca atggggtaaa ccacaggaac agccttcctc accctcctac actaaactcc
     2281 aagaagctcg gtgtctcact catattggca gagaggggga ctccttatct acatatgaac
     2341 cctcccagcc atatactatc aagcttgata ggtcttgttg cgtttgagat ggcttcggat
     2401 tgaagtcctg aatcgcaact acttgtcacc aaatggtttc cacggggcgc gtcgggtcgc
     2461 tctggagcgt agttttgtta cattgacgtt acattccgct taccgccgat ccagcgccct
     2521 gtactgaatc gcttccgcga catgggccgg ctccagttcg ccggctcccg cgagatcggc
     2581 gatggtccgc gcaattttga ggactcggtg ataggcccgg gccgataacg ccagtcgcga
     2641 catagccgtg cgtagcagcg actcggcgtc gggctgcagc cggcaatggt gacggatatc
     2701 ccgcgcggtc atgtgcgcgt tggcccgcac cgacggtctt ccctgaaatc gctcccgctg
     2761 aatcgcacgg gcctgctcca cccggtcgcg gatcgcggaa ctcggctctt ccggctcact
     2821 tttcaccgcc aggtcctgcc aggccactgc tggtacggcg aggtgaatgt cgatccggtc
     2881 cagcagcggt cccgaaatcc ggcccagata acgctcgatc gccaaggggt tgcaatggca
     2941 ctcgcgggtc ggatcccccc gccagccgca gggacacggg ttcatggccg ccgccaacat
     3001 gaaccgggca ggatacgaaa gactcaccgc cgcgcggctg aggcacacta ccccgtcctc
     3061 cagcggctga cgtagcacct ccagcacgtg acgccggaac tccggcagca catccaggaa
     3121 caacacgcca gccctgggcc agactgactt cacccggccg cggagtggag ccgccgccga
     3181 tgaggcccgc attgctgatg gtatggtggg gcgtgcggaa cggccgggcg ggagtaatcc
     3241 cgccaacgaa tgcaccgcgg tggtctcgag ggcctcgttc agcgtcaggg cgggaaggat
     3301 ggtcggtagc cgacgcgcca gcatggtctt gccggcgccc ggcggcccga tcatcaactg
     3361 atccgggtct cccgaaccgc gtcgaaccag tgcacggcgt cggacgcaac cgacactccg
     3421 acccggtccc ccagcttcac cggggtagtt ccttccaccc ggacaacgat caccacgctg
     3481 cccgccccaa gcgtgaccag agtttcactg cccagcggtt caaccaggtt cacttccgcc
     3541 gctgctccct cgccgggagg gaccagtcgc accgcttccg gcctgagacc ggcgatcacc
     3601 ggctgatccg gggctccagg agcccggatc ggaagctcga agtccccgct ctcgtggtgg
     3661 aataccccgt tcacgagccg gcctcgcagc aggttcatcg gcggactgcc gatgaatgtc
     3721 gccacgaacg tgtcggcggg gcgctgatag atgaccgatg gagtgtcgac ctggagcacc
     3781 cgcccgtcgc gcatcaccac gatgcggtcg cccagggtga gcgcctcgac ctggtcgtgg
     3841 gtgacgtaga tggtggtggt gcctaaccgc cggcgcagcg cggcgatctc ccggcgcatc
     3901 tgcacccgga gcttggcatc gaggttggac agcggctcgt cgaacagaaa cacctgcggt
     3961 tgccggacga tggcccgacc cagcgccacc cgctgccgct gccccccgga cagctgccga
     4021 gggcgccggt ccagcatctc tctgagcccc aacaggtcgg cggtttcccg aacccgggca
     4081 tccacctcgc gtcgcggaag cttcctcagc gtgagtgcga acgccaggtt ctggtgcacc
     4141 gtcatgtggg ggtacagcgc gtaattctga aataccatcg cgatgtcgcg gtcgcgagcc
     4201 ggaacatcgt tcaccactcg ctcgccgatg cggagcgtcc cctcagagat gctctccaat
     4261 ccggcgatca tccggagggt ggtgctcttg ccgcagccgg acgggcccac caggaccacg
     4321 aactccccgt cggccaccgc caggtcgaac tggtgtaccg cgacagaggg tttgccgcgg
     4381 tccggataga ttttgcgtac gccctctaac gtgaccgtgg ccatgaccga gctcgacctg
     4441 aatggatgat ccgatccgct ttcccgccgg gttcctctgg ggagcggcga cgtcggccta
     4501 ccagatcgag ggatcgcccc tggcggacgg cgccggcgcg agcatctggc accgcttctc
     4561 ccacaccccg ggacgaacgg ccaacgggga caccggcgac atcgcctgcg accactatcg
     4621 tcgttatgcc ggagacgtcg ggctgatgaa ggaattggga ctgggagcct accgcttcag
     4681 cctggcgtgg ggccggctcc tgccggaagg tgtcggcccg atcaaccggg cgggtctggg
     4741 attctacgac cggctggtcg atctgctgct ggagcagggc atccagtcga tgatcacgct
     4801 ctatcactgg gatttgcctg ccgcactcga tgaccggggc gggtggctca accgggacat
     4861 cgcccaatgg ttcgccgact acgcccgtgt ggcggtcgag gcgttgggtg accgggtgag
     4921 ttactgggtg acgctcaacg agccctgggt cgtgaccgac ggtgggtatt tccatggggt
     4981 cctggcgccg ggacatcaga gccggttcga ggctcccatc gccagccatc atctgctgct
     5041 ggctcacggg accgcgatgc aggcgatccg cgccgaagga gggcgtcaag ccggcctggt
     5101 ggtcaacctc gagcccaagt acccggcgtc cgactcggcg gaagatatcc aggcgaccgg
     5161 ccgagccgac gcctatatga accgccagta tctcgatccg gtgttccggg gcgagtaccc
     5221 cgccgagctg agtgagctgt tcgccgacgc ctggcccggc tggcccgatc gggactttga
     5281 gctgatcagg cagccgctcg atttcctcgg catcaactac tacacccgcg ccgtcacccg
     5341 gcacgacccc ggcgtcgagc tgacccgggc cgcaacggtg cctcagccgc gccagaccca
     5401 caccgcgatg gattgggagg tccggcccga gagcctcacc gatgtcctgc tctgggtgcg
     5461 tcagcggtac ggttcccttc ccttgtttgt caccgagaac ggggcggcgt tctatgaccc
     5521 gccggtcgcg aacggccccc aggtagacga tccactccgg gtggcctact tggccgatca
     5581 cctccgcgcc gccgcccaag ccgtggcgca gggagtggat ctgcgaggct acttcgcctg
     5641 gtccctgctc gacaacttcg agtggagcga gggatacagc aagcgcttcg gcctcatcca
     5701 cgtcgacttc gagacccagc gccgcactcc caaggccagc gcccgcttct atgccgacgt
     5761 cattcgcagc aacggcgcgg tgctgtacgc ctgataccct cccacccacc atcaagacgg
     5821 gtctgaaagc aatccacgga ttacacggat tcccacggat ggctcccggc tgggctgact
     5881 cagccatctt cgccttttgt taagccaaca acagcacagc tactgcttaa agcccatccg
     5941 tgaaatccgt gaaatccgtg gatgctgttc aacttgccgc ggggcagagt ccgccgggcg
     6001 cgacagtcag atccgacccc agccgtacgg tcacccgatg gagcgtgccg tcccgcacca
     6061 gcggaatccg tacagcaccc tcatgagcca tgagagcccg tccgtcgact tcggcggcgg
     6121 tggctccggg ccgcggcgac gattgcgtca cccgcagatc gtagaccgtc tcgccgtcag
     6181 ggagacgata gcggattgag tagcccggcc agtccgccgg aatccgtggc cggagtacga
     6241 tttccttccc ctgatccact gtcattccga gaatggactc gagggctacc cggaacatcc
     6301 agccggccga tccggtgtac caggtccagc cgccccggcc cagatgcggg gtctcgccgt
     6361 agacatcggc ggcgaccacg tagggttcga cccgatagac cgacaccgcc tcgggtgtcg
     6421 ccgcccgggt gaccgggctc aacatttcca gcagttgggc ggcgcggtca acccggccgg
     6481 cttccgccag cgcccgcacc agccagaggg cgccgtgggt gtactggccg ccattctcgc
     6541 gcacgcctgg cagatagccc ttgatgtaac cgggatcgtg cgcagtccga tcgaagggtg
     6601 gagtcaggag acggatgatg ccgtccgccg gcgcgaccag gtggcggtcc gcggcatcca
     6661 gtgccttggc ggcgcggtcg gccggggcgg cgcgggagat gactgcccag gcctgcgcga
     6721 tggcatcgat ccggcattcg tcgctcgagg ccgagccgag cggtgagccg tcgtcgtagt
     6781 acgcccggcg ataccactcg ccgtcccacc cggcgtcgtt gagcgcttcg gccagcgagg
     6841 cctggtaccc ccgatagcga acgacccggc tttcatcacc ccgaccctcg caccagggag
     6901 tgaactcctc gagaatccga tagaggaaaa agcccagcca cacactttcg ccccggccct
     6961 cccggcccac ccggttcatc ccgtcgttcc agtcgcccga gcccatgagg ggaagaccgt
     7021 ggaccccgtg ggtgagcgat cgatccacgg cacggcagca gtggtcgtag agagtggtgc
     7081 tctggctgat ccgctgaggt tcgagatagg cctcgtcttc gcccgacacc agctctcggg
     7141 ccgcgacaaa ccgaaccggt tcgtccagca gaccgaggtc cccggtatgc cgcaggtagc
     7201 cgcacaccac gtagggcagc cagagcagat cgtccgagaa gcgggtccgg attcccttgc
     7261 tcgacggcgg atgccaccag tgcagtacat cgccctcggg gaactgatgg gccgcgtgca
     7321 gcaggatctg gctccgggtg agctcgggga gggcgtgggt cagggccgcg gcgtcctgca
     7381 gctggtcccg gaagccgaac gctccgccgg actggtacag ggccgatcga gcccagaccc
     7441 ggcacgaaag attctggtag cagagccacc cgttcaccat gaggtcgatg gccggcaccg
     7501 gcgtgctgac ctgaacccgg gtgacgacat cgcgccagaa cgcgcgaatg ccatcgaggg
     7561 cctcggtcac cgcggcggca tcgcggaagc ggtggagcag gcggcgggcg gcttcctcac
     7621 tccccccctc gcctaacgcc agggtgaatt ccacctgttc ccccggcgcc agatgaaagc
     7681 cggcgcggaa cgcggcacag ggatcgagac cggcaccggt ctggtgatcg agcggcgcgt
     7741 ctgtgagaac cgcggccggc cgcgcgaccg acccgccggg ccccaggaag gaccgccgat
     7801 ccgtcgtcac ttcggcctca ccgacctcgc gcggccgaag cacactgaag aacgccaccc
     7861 ggccggccca ctcgacccgt tcggggttgg tggcgaagat ggcgccggtt tcggcatcat
     7921 gccgagtcac gatcgagccg gccgtgtccg tccggaggcc gcccaggacc cactcgacat
     7981 aagcgatcag cgagagcttc ctggtcttcg agcccggatt tcgaatgcgg agccgggtga
     8041 gcttgagggg atcatggcgc gggacgaacg cgacgacctc ctgttccagg cccatgctgg
     8101 aatgccgcca gatggaatac ccgaagccgt ggcgcacttc atacccgtct ggtccgggcg
     8161 ccggtcccgg caacggcgac cagtagacat cctgttcctc atcccgcaga tacaacgcct
     8221 cgccatgggg atcggacacc gggtcgttgc tccagggagt cagccggttc tcgcgactgt
     8281 tttcactcca ggtgtatccc gctccccgct cgctggcgac aaaccccgcg acctcgttcg
     8341 cgacgacgtt ggcccacggc agagggggca accgcagacg atcgttctcc cactcgaggg
     8401 taagaacgta ttcgctgccg tcctgggtga acccgcccca tccgttagaa aagcgcagcg
     8461 gctccgcctg gggacgccgc ggcggccgcg gcgggaatgc ttcggccgct gctctgaacc
     8521 gcccgcctgt tgtcgggggc gggaaggcgg tgccgggcag aatgaccgta cgcgcgcgct
     8581 ggaagaccgg gtcgggtccg gccgcccgat cgcgatccag caacgccagc accgcttccc
     8641 ggctgtctcc cgcggcgagc gaccagacga actgtcgcgt ttctcccggt tcgatcacta
     8701 cctcacatcg caggctcagt atcgggtcga gcacgttccc caccgttccc gaaaaccggg
     8761 ggcctcgatc cagcgccgcc gggtcggcca gggtgcgtcc cctcccgatg aaccgggctc
     8821 ggtcggtttc gaactgcagc ggcaccatcg tgtccccttc gatccagagg ctgtgaccca
     8881 tccaggaggc ggcctcttcc gggccgcggg ggcggcggtg cgccaggagg atggcgggcg
     8941 gaacctgctc cgtctgcacg aacagcttgg agaaggccgg gtggcccgcg tcggcggctg
     9001 ggtgattcaa agccacttcc acatagctgg tgagctccag tcgctgggcc gtactcgcgc
     9061 tgtttcccag cgtcagccgc ctcagctcga tgtccgcgtc aggcgccacg gccacctcga
     9121 gccgggtggt cacgaggcag ctccggtcct gcgagcttcc tgcccgccac cagtgcccct
     9181 ggtcgatgct ccggatcagg agcaagaagc cctgtgcctc ggcggcccag tcggccgacc
     9241 agcgcgtcag cgccaggtca cgccaggccg agtaaccacc gccggtatca ctc
//
LOCUS       DASWKS010000387         2169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2442151, whole genome shotgun sequence.
ACCESSION   DASWKS010000387 DASWKS010000000
VERSION     DASWKS010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442151"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1576)
                     /locus_tag="VGA78_10990"
     CDS             complement(<1..1576)
                     /locus_tag="VGA78_10990"
                     /inference="COORDINATES: protein motif:HMM:NF015377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEX9894441.1"
                     /translation="MRGPAVLDVPYLAQSVLLCGGAAVAMVERWWGRRGVYAEDFANL
                     VRPELGGILTTDLASASRARGWDTQVLDGTPELVQQSLQNGAPVVALIQVARDRYHFV
                     VVLGWSDGRVVFHDPARAPFTTIDETQFLASWAGTDRWALLIRPRPAAPDTATAGNPT
                     PVPVDSMPCPPWLDQALDAAAARRLDDAARLLEEAGNACPSEPLVLRELAGVRFKQAR
                     HAEAIRLATEYLGLVPSDEHGWRLLASSRYLTGDQDGALRAWNQVAQPTVDLVRIDGA
                     RKVRFRAIAGAVSVPHGTVLTPSRLALARRRVSEMPAIRETAVNYQPVPGGITEVRVA
                     VVERPTVGRAWRLVAAGAIRALVQQEVGLEVASPTGAGELWSGNRRWEYARPQTVFRV
                     DMPAHFGFPGVIGIEGAWERFRVALDPARVTEESMRSAVVGFGGWVTARVRPSAALRV
                     ERWSGDRQYLAASMGAEFRALGDRFALSVTGDHAVSLSAHPSYTRGGAHAMWASSLGL
                     GRAAWSTRLGFNWVSAE"
     gene            complement(1696..2076)
                     /locus_tag="VGA78_10995"
     CDS             complement(1696..2076)
                     /locus_tag="VGA78_10995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894442.1"
                     /translation="MSKHLTPSMVMAVAAMSLAAPLHAQGRSVVSSAELDAAVAARPA
                     TRGEAVRNVLLTDQAQRVASRMGISPSELSARVATLDSATLDQIAERTAASDPALAGG
                     AINVTITATVLIVALLVLIILLVA"
BASE COUNT          377 a          753 c          726 g          313 t
ORIGIN      
        1 cctccgcgct cacccaattg aatccgagcc gagtggacca ggccgcgcgg cccagcccca
       61 gggaagaagc ccacatggcg tgggcgccgc cccgcgtgta ggacgggtgg gccgacaggg
      121 agaccgcgtg atcgccagtg acgctgagcg cgaaccgatc gcccaaggcc cggaattcgg
      181 cacccatcga agccgccaga tattgtcgat ccccggacca tcgctcgacc cgaagggccg
      241 ccgacggacg caccctggca gtgacccacc caccaaagcc aacgacggca gaccgcatgc
      301 tttcctcagt gactcttgcg gggtcgagcg caacgcgaaa gcgctcccag gcgccctcga
      361 ttccgatcac ccccgggaat ccaaaatgcg ccggcatgtc gactcgaaag acggtttgag
      421 gacgggcata ttcccagcgc cgattcccgc tccacagctc tcccgctccc gttgggctgg
      481 cgacctcgag ccctacctcc tgctgcacaa gggctcggat cgccccggcc gcaaccaggc
      541 gccaggcgcg cccaaccgtt ggacgttcga cgacagccac tcggacctcg gtgatgccgc
      601 ctgggaccgg ttggtagttc acggccgttt ccctgatcgc cggcatttcg gacactctgc
      661 gcctggcgag tgccaggcgg gacggagtga gcaccgtgcc gtgaggcacc gacacggccc
      721 cggcgatcgc ccggaaccgc accttccgcg ctccgtcgat ccggaccagg tcgacagtcg
      781 gctgggcaac ctggttccac gcgcggagcg cgccgtcctg atcgcccgtg agataccggc
      841 tgctcgcgag aagccgccag ccatgttcgt cagagggaac gagcccaagg tactcggtgg
      901 caagccgtat tgcctcggca tgccgtgcct gcttgaatcg aaccccggcc agttcgcgca
      961 ggaccagagg ttcggagggg caggcgttgc cggcctcctc gagcaggcga gcggcgtcat
     1021 ccagtcgtcg ggcagccgcc gcgtcgaggg cctggtccag ccagggtgga cacggcatcg
     1081 agtccaccgg aaccggcgtc gggttgccgg cggtggccgt gtcaggagcc gccggtcgcg
     1141 gccggatcag caaggcccag cggtcggttc cggcccaact ggcaaggaac tgggtctcat
     1201 cgatcgtggt gaacggggcc cgggcgggat catgaaagac cactcgcccg tcgctccacc
     1261 cgagcaccac cacgaagtgg tatcggtccc gggcgacctg gatgagggcc accactggag
     1321 cgccgttctg gaggctctgc tggaccagtt ccggagtgcc atccaggacc tgggtgtccc
     1381 agcctcgggc gcgagaggcc gaggcgagat cggtcgtgag aatcccgccc agctcgggtc
     1441 tgaccaggtt ggcgaagtcc tcggcgtaga cgccacgccg tccccaccac cgctcgacca
     1501 tggcgacggc cgcccccccg cagagcagga ccgactgggc gaggtagggc acgtcgagca
     1561 cggcgggccc gcgcacaggc gggcctgcag ccggggactg ggctagtgcc gaggccctgc
     1621 ccaatcccga cgcaacccac aggcctgcag tgaccagccg agcaatgaca cccacgatcc
     1681 gtctgggctg cagcgctagg caaccagcag gatgatgagg accagcaagg cgacgatgag
     1741 aaccgtagcg gtaatggtga cgttaatcgc accgcctgcg agggccgggt cacttgccgc
     1801 ggttcgttcg gcgatctggt ccagcgtcgc cgagtcaagg gtggccactc gagccgacag
     1861 ctccgacggg ctgatgccca tccgactggc caccctctgc gcctgatcgg tcaggaggac
     1921 atttcggacc gcttcccctc tggtcgctgg gcgggcggcg accgcagcat cgagctctgc
     1981 gctgctgacg acgctcctcc cctgcgcgtg gagtggggct gcaaggctca tggcggcaac
     2041 ggccatgacc atggatggcg tgagatgttt cgacatgtgg gctcctctgg aaagtggcgt
     2101 gcgacacccc tgcctgggtc ggtggcggaa cctatcagtg acaggggacg ccgccaatcc
     2161 atcattcga
//
LOCUS       DASWKS010000388         1594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1306232, whole genome shotgun sequence.
ACCESSION   DASWKS010000388 DASWKS010000000
VERSION     DASWKS010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306232"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="VGA78_11000"
     CDS             complement(<1..347)
                     /locus_tag="VGA78_11000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX9894443.1"
                     /translation="MIRRRAGFTLIELLLAVILAAVVSGVMVRLVMGDMRFAEDREAW
                     RTARQAARSGLTVLTADFRMLETAAGVEAVAAGGQDITVRIPYAFGVLCSTTGTTSTL
                     TLLPVDSLMFAQPG"
     gene            complement(344..748)
                     /locus_tag="VGA78_11005"
     CDS             complement(344..748)
                     /locus_tag="VGA78_11005"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX9894444.1"
                     /translation="MSPSTIRSSISERGFTLIEIMASIALLGLTLMALAPVTMRVGRL
                     STGSTSATQCAAVLAGEVQRLEQVDFAALTPGTTCYNRSSADFPHYTCVKVTDLNGTT
                     KRLVVVVSPVGAMPDSVIVDKTSGSRYNPLSQ"
     gene            complement(745..1149)
                     /locus_tag="VGA78_11010"
     CDS             complement(745..1149)
                     /locus_tag="VGA78_11010"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HEX9894445.1"
                     /translation="MVIVVVAILVATTAPRIVPILTRAGAGQAASLVATDLEQAVSLA
                     SRQRRPVRVACDCANGTYTITDRGNGTVLFHRVVVGGSGGFGLNSMAFSTPQVDIFPS
                     GQTSAPLTVSLTASDVTRQVSMSTGGFVRVIR"
BASE COUNT          290 a          512 c          535 g          257 t
ORIGIN      
        1 cccggttgag cgaacatcag ggaatccacc gggagcagcg tcagggtgga agtggtgccg
       61 gtggtggagc agaggactcc gaaagcgtag gggatccgga cggtgatgtc ctggcccccg
      121 gcggcgaccg cctcgacacc agcagcggtc tccaacatgc ggaaatcggc cgtgagtacc
      181 gtcaacccgc ttcgggccgc ctggcgggcg gtccgccagg cctcgcggtc ctcggcgaaa
      241 cgcatgtcgc ccataaccag ccgtaccatg acccccgaca ccaccgctgc gaggatgacc
      301 gccagcagca gctcgatcag ggtgaagccc gcgcgtcgcc ggatcattga ctcagggggt
      361 tgtaacggct gccgctggtc ttgtcgacga tcacggaatc cggcatggcg ccgacggggg
      421 acaccaccac gaccagccgc ttggtggtgc cgttcaggtc ggtgaccttc acacacgtgt
      481 agtgcggaaa gtcggcgctc gaccggttgt agcaggtcgt gccgggcgtc agcgccgcaa
      541 agtcgacctg ctccagccgc tgcacctccc cggccagcac cgcggcgcac tgggtcgccg
      601 acgtggaccc ggtcgacagc cggcccaccc gcatcgttac cggcgccagc gccatgagcg
      661 tcaacccgag cagagcgatg ctcgccataa tctcgatcag agtaaagcca cgttccgaaa
      721 tcgaggaccg gatagtcgaa gggctcatcg gatcaccctg acgaaaccgc cggtcgacat
      781 cgacacctgc cgagtgacat cggaggccgt gagcgagact gtcaacgggg ccgaggtctg
      841 gccggacgga aagatgtcga cctggggggt tgaaaaggcc atgctgttca ggccgaagcc
      901 gccggacccg cctaccacga cccggtggaa gagaacggtg ccgtttcccc ggtcagtgat
      961 cgtgtaggta ccgttggcgc agtcgcaggc gactcgcacc ggtcgtcgct ggcggctggc
     1021 cagggaaacg gcctgctcca ggtcggtcgc caccaggctc gcggcctggc ccgccccggc
     1081 ccgcgtaagg atcgggacga tgcgaggggc cgtggtcgcc accagtatgg ccacgaccac
     1141 gatcaccatc agcatctctg tgagagttag gccgcggtcc caggccgggg cactgcgccc
     1201 tggacggtgc atcgagaacc tccaccattt caccccgtcc aaccgtgcgc tgcaggggtg
     1261 cctgggccaa ggcagaattg ggcagcaaga ggagggccac cggatgcctc ggtgggtagt
     1321 cattgtcttg gcgatagatc actcgcctgg actggtttgc ctccgtcgct ccgatctggc
     1381 gttatgcggg aggcagcttg attctacgat ggagtggtgt ctgctgccgg tgatgatgac
     1441 ggtgctgttc tcgagcgttg cgttcggggg gtcaacccgc acgcccccag tgctagcaca
     1501 tcgccgcgcc gcaactatga ggaagtgtct ttgggctcaa cccactgtta ggcaccggct
     1561 caaaccaggc tcggcggtag tgtggacgta aatc
//
LOCUS       DASWKS010000389         2124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3515546, whole genome shotgun sequence.
ACCESSION   DASWKS010000389 DASWKS010000000
VERSION     DASWKS010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3515546"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..555
                     /locus_tag="VGA78_11015"
     CDS             130..555
                     /locus_tag="VGA78_11015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894446.1"
                     /translation="MDYPDPVFVFLQSQGCSRAVVAAGLPGLVATWERIVESVAEGYQ
                     GSLEQYLNDMDTRELLNEAWQTARRDQQEESAKRLDAVDRHMRGLVIPTTHCLYGDLV
                     AEDEGWTAESHWWYFSRPAAPGRLLMTELRGGAAPGADP"
     gene            complement(509..1657)
                     /locus_tag="VGA78_11020"
     CDS             complement(509..1657)
                     /locus_tag="VGA78_11020"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX9894447.1"
                     /translation="MTPSSVGAVLYNESRLKESRLRWSYRIVTILGTEVRLHVTFLFL
                     LAWFAFAAYSTGGREAAVASAVFLVLVFGCVLLHEFGHILAARRYGIRTPEVLLSPIG
                     GLARLERLPEEPRQEIVVALAGPLVTLIIILVLAALLRAMGAGDNLFQFDPTERQLLP
                     GLFQINVILLAFNLIPAFPMDGGRVLRALLAKRKGIVAGTRIAARIGQMFAFLLGLLG
                     LTSPAPMLIIIAGFIYLAAEAEAAAVETRAAGQGMTAAAMMITDLRVLPIYATLEDAV
                     RLLLAGEQREFPVVDNDRRLEGLLTRDTLIKGLAERGPGATVGEVMAKPVKPVMPGVP
                     FDRALEQLRSSGLPALPVVDQLGMVVGLITTDNITDLLLVRRHLAARS"
     gene            1709..>2124
                     /locus_tag="VGA78_11025"
     CDS             1709..>2124
                     /locus_tag="VGA78_11025"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894448.1"
                     /translation="MLGWGLGYFRINAEGHVMVHPDRDPARGVDLFRLALDLNAQGIA
                     FPILLRFSDILKARIGELQSQFRRAIEEHGYEGSYTTVYPIKVNQQRHVVEEIVEFGA
                     QYGVGLECGSKPELQAVLGLAERTDHLIVCNGYKDE"
BASE COUNT          388 a          705 c          714 g          317 t
ORIGIN      
        1 gcaggttggc gccgttccgc cggagcgccg cgaccagcgc gctgccgatg aatccgctgg
       61 cgccgctgac ggccacggtt cggactgggt cccttgccat cccgcgctcc aggcctatgg
      121 tatgaaggag tggactatcc cgaccctgtt ttcgtgttcc tgcaatcgca gggctgttcc
      181 cgcgcggtcg tcgccgccgg cctgcccggc ctggtggcga cctgggagcg gatcgtagag
      241 tcggtggccg agggatacca gggatcgctg gagcagtacc tcaacgacat ggatacccgg
      301 gagctgctga acgaggcgtg gcagaccgcc cggcgcgatc agcaggaaga atcggcgaaa
      361 cgactcgacg ccgtcgaccg gcacatgcgc gggctggtca ttcccaccac ccactgcctg
      421 tacggcgacc tggtcgctga agacgaaggc tggaccgccg aatcgcattg gtggtatttc
      481 agccggcccg ccgcgccggg ccggctcctc atgaccgagc tgcgaggtgg cgccgcacca
      541 ggagcagatc cgtgatgttg tcggtggtga tcagccccac caccatgccg agctgatcca
      601 cgaccggcag cgccggaagg cctgagctgc gcagctgctc cagcgcccgg tcgaacggca
      661 cgccgggcat caccggtttg accggtttgg ccatgacttc tcccacggtg gcgccgggac
      721 ccctttccgc caagcccttg atgagcgtgt cgcgggtcag caaaccctcc agccgccggt
      781 cattgtccac caccgggaat tcccgctgct ctccggccag gagcagccgg accgcgtcct
      841 ccagcgtggc atagatcggg aggacccgga gatcggtgat catcatcgcc gcggcggtca
      901 ttccctggcc ggccgcgcgg gtctcgacgg cggccgcttc cgcctcggcc gcgagataga
      961 tgaacccggc gatgatgatg agcatggggg ccgggctggt gaggcccagc aggcccagca
     1021 ggaacgcgaa catctgcccg atgcgggccg cgatccgggt ccccgccacg atcccttttc
     1081 gcttcgccag cagcgcgcgg aggacccgcc ccccgtccat cgggaaggcg ggaatcaggt
     1141 tgaaggcgag caggatgacg ttgatttgaa acagcccggg cagcagctgc cgctcggtgg
     1201 gatcgaactg gaagaggttg tccccagcgc ccattgccct gagcagggca gccagcacca
     1261 ggatgatgat cagggtcacc agcgggccgg ccagggcgac cacgatctcc tgccggggct
     1321 cttccgggag ccgctccagg cgggccaggc ccccgatggg ggagaggagg acctccgggg
     1381 tacggatacc gtagcggcgc gccgccagga tgtgaccgaa ctcgtgcagc aacacgcacc
     1441 cgaacaccag caccaggaac acggcgctcg ccaccgcggc ttcccggcca cccgtgctgt
     1501 atgcggcgaa ggcgaaccag gcgagcagaa acagaaacgt gacatggagc cggacctcgg
     1561 ttcccagaat cgtcacaatg cgataggacc agcgcaaccg ggactccttc agtcggctct
     1621 cgttgtataa tactgcgccg acggatgaag gagtcacgcc atcgcgacca ccgagtgggg
     1681 catcaaggac gccgagaagc tctacagcat gctcggttgg ggcctggggt acttccggat
     1741 caatgccgaa ggccacgtca tggtacatcc cgaccgcgat ccggcccgcg gcgtcgacct
     1801 gttccggcta gcgctggacc tgaacgcgca aggcatcgcg tttcccatcc tgctgcgttt
     1861 ctccgacatc ctgaaagcgc gaatcggcga gctgcagagc cagttccggc gggcgatcga
     1921 ggagcacggc tacgaaggca gttacaccac ggtctacccc atcaaggtca accagcagcg
     1981 ccacgtggtg gaggagatcg tcgagttcgg ggcccagtac ggcgtggggc tcgaatgcgg
     2041 gagcaagccg gaactgcagg cggtcctggg tctggccgag cggaccgacc acctgatcgt
     2101 ctgcaacggg tacaaagacg agga
//
LOCUS       DASWKS010000390        13159 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1306486, whole genome shotgun sequence.
ACCESSION   DASWKS010000390 DASWKS010000000
VERSION     DASWKS010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13159
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306486"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2967)
                     /locus_tag="VGA78_11030"
     CDS             complement(<1..2967)
                     /locus_tag="VGA78_11030"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase PknK"
                     /protein_id="HEX9894449.1"
                     /translation="MDPVGARPLVRDPGAASFVPGYSITAELLRDNGRVIYRGQHNAT
                     GRSVLIRMLAPESEDEAARATLRLEEGLLARIDLPGVARSCGIDERGPSIALILEDVG
                     GELLRSRLARGRLDPPTFLAIAVPLTRVTAELHRRSILHGDLHPGTILVDPEHERVSL
                     IDLSFAARPGPRSGPAGPLKGAIAYMAPEQTGRTGREVDHRSDLYALGVTFYEMLTGR
                     RPFDSNDPLAIVHAHLAQKAVPPSELDPAIPGPLSDIVMKLLAKAPEDRYQSGFGLEA
                     DLACCCSEWKASGRIEPLVTGRLDVPDRPVVPQQLYGRQAETTALREAFERAGEGRLQ
                     FLLVSGYAGIGKTSLIRELQRFVEPGHGHFVSGKFDQIARVPYGGLVQALEALVGQLL
                     TEGDQQLSVWRSRLDTELGTGAAVLAELIPGIQALVGSQPPPPAVGPMEAQNRFRLVM
                     QKFLVALSTAREPLAMFLDDLQWADSASLDLLQPLLTNRGPRLLLIGAYRDNEVDAAH
                     PLARTLGALGAASVPVQRLALGPLELPELALLIRDTLQGRLSDAEPLARLVLQKTGGN
                     PFFVIQFLTALWEAPLFLFDYDRGTWTFDLEAVARANVTDNVVDLMTQKIQRLPHKAQ
                     TALMLAACIGNRFERDTLAIVSQQRPEDTVDDLAEAVREGLILQAGADGFIFLHDRVQ
                     QAAYALIPAGRKQHVHLTVGRLLLERASHPVDDPRLFEIANHLNLGSGLITGDAERLA
                     LARLNLAAARKSKASTAYQAALGYHRAGTSLLGDGDWEIHYELVFALHLGVAECEYLS
                     GDFESADRSFTRLYGRARTRLDRAKVYELEILQYESLSRYDDAIRVGKEALRQFGLDF
                     PSGPEATATALQAELAAIHGLLRDGNIESLLDLPLMADPETRAVMRLLSFMHTPLYLS
                     ADQELTLLNTATMVRLSLAHGNTEESAYAYALHAMHVGPILGQFQAGYEFGSLALRLS
                     ERFAVPGVRARVLMNLG"
     gene            3227..3808
                     /locus_tag="VGA78_11035"
     CDS             3227..3808
                     /locus_tag="VGA78_11035"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HEX9894450.1"
                     /translation="MTEQASPNQPRSTGIADEGGLLSRLRAGDTAALDQLLKAYWPSL
                     VRYATALLKDPDTAQDLVQDTFVRLWDRRSRLEPGSLRAYCYRVLHNLAMDEIRRRRF
                     RIAWSLKLNDEPETNRGSAETDLLRHQREAAVSRAIDALPTRRRETFILAHLHGLSYQ
                     EIATVMGVSPATVKNQVAAALAQLRSALRSHLE"
     gene            3857..4846
                     /locus_tag="VGA78_11040"
     CDS             3857..4846
                     /locus_tag="VGA78_11040"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX9894451.1"
                     /translation="MTSADRVPMDEELLFRVIQGRATPTERDGVTGWRNASPEHEARF
                     TELIQLLGLATEVDAGIRVGPPPNANDIIRLASHRARIVARGHWFWRLGVGISAAAVL
                     VIAIGIYRTRQADPPGFVFGAGEFVTGVKETATVQLGDGSVVRLAPASRLRVTGGRSE
                     RVVSLEGRAYFAVATMRGRPFRVRTRVGAVTVLGTRFDLQASADTLALVVVEGRVALS
                     ARGQQATLESGERTELKNGRLLRPAKVADVARSVAWAGNFLVFQATPLSSVAAEIAQH
                     YHVTVEISDPTLANRTVTAWLSDQSLDQAINVVCTIVDAQCAVRNSTVIVRPR"
     gene            4888..8379
                     /locus_tag="VGA78_11045"
     CDS             4888..8379
                     /locus_tag="VGA78_11045"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HEX9894452.1"
                     /translation="MRRILLFASLAVGAGPVPTPVSVAAQTSPRTIAAANKGTSTALL
                     TRPARLEIEDTPLDRALTELSLKSGVPISFSPSLLPHQTVRCWCGDVTVGGALERLLA
                     KTSLQFTEIESQVLIHPDRRPTLTDPLRSTPATSLAFGEASIRLPPAATVPSIPEPVA
                     KAARARSQGDLRAIRQATAISGRVTDQSSGQPLVGARVQAMGTNYVATTNQQGTYTIQ
                     PVTPGTYNLRIIMLGYASQQRIVTVGLGETVTADWILTAIPFALDEIVTTTTGEQLTR
                     ELGHTVGRVDAARLVESAPVTDLSDVLNGRVAGVTVLKNDGVIGGGSRVRIRGLSSVS
                     LSNDPLLYVDGIRVSERGPVLRLSNGGFSPSFFDDINPEEIESIDIVKGPSAATLYGT
                     QAANGVIRITTKRGRSGPNKWTVYTEHGVFHDPSDYNPIYFAKATGSAAQCLLPSQAA
                     GECEIDRVITRNLMREPDFTPLQDAFRQQYGVQVSGGAEALRFFAGAELEDQGGLLKL
                     PESEAEFRKELLGVSSLPKDETDPSHQRKVNLRGNLNASLGSKADLSFNAAFTNNNLL
                     IPQVGDNGRSLLSSALQATADPTASTPYGFPVRPGYAVSLVERRRSNHFINSATASYR
                     PTNWLTSRATVGLDYIGFEDSELEPNGRACPVCGSALGFRALHRYTTYKYSVDLGSTA
                     SFKLSERLGSKTSVGAQYNKDNVVAAFNTGQDLPLGAETYSGAAIIGSTESTTKAVTL
                     GSYLEEQVSLDDRLFLTGAIRIDRNAAFGRAARTAHYPKLSGAWVAREGAGANEHSWL
                     GQLRLRAAYGQSGLQPGPLDAVPFYNGVSVALFTGTAPGVTLGGVGNSSLRPERSREI
                     EGGFDATLFSNRATLEFTAYDKRTTDALVRRPLAGSAGAVATRIENLGVVSNKGIEAS
                     ILARVIDATDLQWDIGLEFSGNRNRLVELAEGVPSPTGFGYRQAIGYPLYGTWWPALV
                     SFDDANGDGIIVGSEVVTTDTAVFNGSTFPTRTAGFTSTVSLFRSRLRIGTQLEYKGG
                     FRVLDVNTLFSCGLGPRVNCQGLNDPNASLEEQARGEAVANYFAFGAFVDDADYLRLR
                     EVSISYTLPPSFTGWLGPKATTVTVTGRNLLLFTGFRGWDPEGSTLAGTTPDGPVYNF
                     WQPGQPRSFLLRLNFSF"
     gene            8393..9691
                     /locus_tag="VGA78_11050"
     CDS             8393..9691
                     /locus_tag="VGA78_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894453.1"
                     /translation="MPTIRSIVIIGCLGLLAGCDSLLEVERPDIIEPGKLTGEAGATA
                     AYNGAIGDFASALAGPGAVAGVASNFLAYAGLFSDEFRFGSTPPEVGQFDQGRVVKEN
                     TLGQGIYLQLHHARESAEQAAERIVEFKPGDSRAGELYGVAALATLLLGEHYCSGMPF
                     SQSQPDIMYGQPLSTTQIFDRALDLLQQGSTNIGGVVRIANLLAVLKGRALLDQGDGP
                     AAGAAVTAVPTSFSYEALYAGGNTATQNLLRSRSYDGGDLFVADNEGGNGLNFASAAD
                     PRVPVDFPAIPPYNGTGARLLIYNDFGTPVVQASGIEARLIEAEAALEDGNVSGWLAQ
                     LNTLRDLQGLTPVADPGTAVARIDLTFRERAFWLYSTGHRVGDMRRLVRQYNRPVTAV
                     FPTGPYPGGITRGNQASIVIPTTEENNPHYQASDCDPSKA"
     gene            9670..10455
                     /locus_tag="VGA78_11055"
     CDS             9670..10455
                     /locus_tag="VGA78_11055"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX9894454.1"
                     /translation="MRPLEGVTPTRIRILAFFLLAYALTWFGNLGNVIHPAVWWPRPM
                     FVLGPILAAPLVIGWTEGRAGLLAWWHRILRFRAPGRIYAAGLLIPLAIIVTSAALAV
                     AAGASLPPIAAWNWGALLVALPIVPLGGPIPEEPAFRGYGQHVLQQTMSPLAASLWIG
                     LGVLVWHLPILIIGGIPWPIAVALPAVSVVYAWLYQAGGSIWPLVGLHFIQNLVGGML
                     FGAMFDGRGDVVWTGFLAALYVLWALILAWRLGPTLGAAVRTK"
     gene            10464..11588
                     /locus_tag="VGA78_11060"
     CDS             10464..11588
                     /locus_tag="VGA78_11060"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9894455.1"
                     /translation="MTWILRAGLAGMALLGLSRAAETQQGQAGLLARIDSVVAAEMQR
                     TGTPGLTVAVEQRGELLLAQGYGFANLELSVPATVETIYQIASITKQFTALAIMQLVD
                     QGKVRLTDEITRFLPDYPAQGHRITIEHLLTHTSGIRDYTGLGPRFWSELSRLDLSKQ
                     QMLGLFQDEPFDFNPGEQYRYSNSGYFLLGLIVEKVTGSSLSKYFEENIFRALGLRST
                     SYCDFRAIVPRRASGYAVVSGNVINAPPISINVMGGAGAICSTVLDLLVWQRALNQAR
                     LLSPGSRDRMRTAATLNDGKSTGYGFGLGLGLVDGHRLIAHGGGVNGFMSWLGHYPED
                     DLTIVVLSNTGSVPAKNVGRQIGRVVLQLPLLTMVDPPLF"
     gene            complement(11869..12792)
                     /locus_tag="VGA78_11065"
     CDS             complement(11869..12792)
                     /locus_tag="VGA78_11065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketopantoate reductase family protein"
                     /protein_id="HEX9894456.1"
                     /translation="MRVVVLGAGAVGAYYGGQLSRAGHEVACYARGANLVALRQHGLE
                     IKSPEGTFHASVAATDRTEKLGPADFAILAVKSYSLEGIASAVRFCAEQGAVIVPLLN
                     GVDTAERLVDLGVPPAAVIGGLTRISVIRVAPGVVERRSSFQSVVVGEFDGQASARVD
                     RIAAAFGEAGAEARVSENIQLDLWRKFVFITALAAGCGLARSAIGPLLSHRLGRRLLE
                     RATAEVVAVGRARGIPFPDDEATRVMSVLDGLPSGMKPSFLADLESGGPTELDILSGA
                     VSRFAEPLGIATPIHDTATVVLDPRTSVAPA"
     gene            complement(12911..>13159)
                     /locus_tag="VGA78_11070"
     CDS             complement(12911..>13159)
                     /locus_tag="VGA78_11070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894457.1"
                     /translation="LPKLVITASVTFTFHGAMLIIEDARITQVRLGDLTAAIELSTNK
                     AELVKRDVHKWTLPGMYRLREPIGITPPAPARPATLTG"
BASE COUNT         2258 a         4293 c         4294 g         2314 t
ORIGIN      
        1 cccgaggttc atcagcaccc tggcgcgcac cccgggcacc gcgaagcgtt cgctgagccg
       61 cagggccagg gacccaaact catatccagc ctggaattgc cccaggatcg gaccgacgtg
      121 catggcgtgg agtgcgtagg catatgccga ctcttccgtg ttgccgtgcg ccagtgatag
      181 ccgaaccatg gtggcggtgt tcagcagcgt cagctcttgg tccgctgaga ggtagagtgg
      241 tgtgtgcatg aagctgagca acctcatcac cgcccgggtc tcgggatcgg ccatgagggg
      301 gagatcgagc agcgattcga tgtttccatc ccggagcagg ccgtggatcg cggcgagttc
      361 ggcctgcaac gctgttgcgg tggcctcggg accggagggg aagtccagac cgaactggcg
      421 gagcgcttcc ttgccgaccc ggatggcgtc gtcataacgg gacaggctct cgtactggag
      481 gatttccagc tcgtacacct tggcccgatc cagccgagtc cgggcccggc cataaagccg
      541 ggtgaaggac cggtcggcag actcgaagtc gccgctcaag tactcgcact cggcgactcc
      601 caggtgaagg gcgaatacca actcgtagtg gatctcccag tcaccgtcgc cgaggagtga
      661 ggtcccggcg cggtggtacc cgagcgcggc ctgatacgcg gtcgatgcct tggacttacg
      721 cgcggccgcc aggttgagac gcgccagcgc caggcgctcc gcgtcaccgg taatgagccc
      781 actgccaaga ttgagatggt tcgcgatctc gaacagccga ggatcgtcga ccgggtggga
      841 cgcgcgttcg aggagcaacc ggccgacggt gagatgaacg tgctgcttac gcccggccgg
      901 aatgagcgcg tacgccgcct gctgcacccg gtcgtgcagg aagatgaagc cgtcggctcc
      961 ggcctgcagg atcagtcctt cccgaactgc ctcggcgaga tcgtcgactg tgtcttccgg
     1021 tcgctgctgg ctcacgatcg ctagcgtgtc ccgctcgaag cggttgccga tacatgcggc
     1081 cagcatcaat gcggtctgcg ccttgtgcgg cagccgctgg atcttctgag tcatcaggtc
     1141 gacgacgttg tcggtcacgt tcgcccgcgc caccgcctcg aggtcgaagg tccaggttcc
     1201 gcggtcgtag tcgaacagaa agagcggcgc ctcccatagt gcagtgagaa actggatgac
     1261 gaagaatgga ttgccccctg tcttctggag gaccaaacgg gccagcggtt ctgcatccga
     1321 gaggcggccc tggagcgtgt cccggatcag gagagcgagc tcgggcagct ccagcggccc
     1381 cagtgcgagt cgctgcaccg gtacggaggc tgctcccagg gcacccaggg tgcgcgccag
     1441 cggatgggcc gcgtctacct cgttgtcgcg gtatgcgccg atcagcagca ggcgcggccc
     1501 ccgattggtg agcagtggct gcaagaggtc gagactcgcg gagtcggccc actgcaggtc
     1561 gtccaggaac atcgccaatg gctcgcgtgc ggtcgacagc gcgacaagga atttctgcat
     1621 caccagccgg aatcgatttt gggcctccat cgggccgact gcggggggtg gcggttggga
     1681 gcccaccaga gcctgaattc ccggaatcag ctcggccagg acggcggctc ccgttcccaa
     1741 ctcggtgtcc aggcgactgc gccagacgga gagctgttgg tcaccctccg tcaggagctg
     1801 accgaccagc gcctccagtg cctggaccaa tcccccgtat gggactcggg cgatctggtc
     1861 gaacttgccc gacacgaaat ggccgtggcc gggttcgacg aacctctgga gctcccggat
     1921 cagggaagtc ttgccaatcc ccgcgtaccc cgagacgagc aggaattgca gacggccttc
     1981 accagcgcgc tcgaacgctt cccgcaacgc ggtggtctcg gcctgccgtc cgtagagctg
     2041 ctgcggaacg acaggtcgat ccggcacatc gagccggcca gtgacgagcg gttcgatgcg
     2101 gccgctggcc ttccactccg agcagcagca tgccaggtca gcctccaggc cgaagccgct
     2161 ttggtagcga tcttccggcg ccttggccag tagcttcatc acgatgtcgg agagtgggcc
     2221 aggaatcgcc ggatccagtt cagagggtgg aaccgccttt tgcgcgagat gggcgtgcac
     2281 aattgcgagg ggatcgttgg aatcgaaggg cctgcggccg gtcagcattt cgtagaacgt
     2341 cacgccgagt gcatagagat ccgaccgatg gtcgacttcc cgacccgtgc gtccggtttg
     2401 ctccggggcc atgtaggcga tggcaccctt gagcggccca gccggccccg atcgtggccc
     2461 cggcctggca gcgaagctca ggtcgatcaa cgaaacccgc tcgtgctccg gatccaccag
     2521 gatggtgccg gggtggaggt ctccgtggag gatactccgc cggtgcagct cggcggtcac
     2581 gcgagtgagc gggacggcga tggcaaggaa ggtgggagga tcgagacgac cgcgggccag
     2641 ccgggatcgg agcagctcgc cccccacatc ctcgaggatg agggcgatgg acgggcctcg
     2701 ctcatcgatt ccacaggacc gagcgacgcc cggaagatcg attcgtgcca gcaggccctc
     2761 ttcgagccgg agggttgccc gggcggcctc gtcctccgat tctggtgcca gcatccggat
     2821 gaggaccgag cgtcccgtgg cattgtgctg cccccggtag atcacccggc cgttgtcgcg
     2881 cagcagttcg gcggtgatgg agtagccggg tacgaacgaa gccgcgccag ggtcacgaac
     2941 cagggggcga gcgccgacag gatccacgga tgccccgcgg tgagaccgcc gcgtgctcgg
     3001 gagagaggaa gctcacagac cttagacagg aattctaccg cggccgggcg cccgcggcca
     3061 gcgatgactg aatcaccgcc ccggccgcgg tggaactcct gtcggtggat caagtcacga
     3121 ctcagactgg atgacggcgg ttgcgccccg cctccagagg ccgtatctct ctccccacct
     3181 cgagtcgtag ttctcgttca ccagccacag ccgcccgact gttctcatga ccgagcaggc
     3241 gtcgccgaac caaccgcgct ccaccgggat cgcggacgaa ggtgggttgc tatctcgcct
     3301 ccgagcggga gacacggcgg ctctcgacca gctgctcaag gcatactggc cgtctctggt
     3361 tcgctacgcc accgcgctgc tcaaggaccc cgacaccgcg caggacctgg tgcaggacac
     3421 ctttgtgcgg ctttgggatc gacgttctcg actcgagcct ggttcgctgc gagcgtactg
     3481 ctaccgggtg ctgcacaatc tggccatgga tgagatccgg cgccggcggt tccgaatcgc
     3541 ctggtccctc aagctgaatg atgaacccga gaccaatcgt ggttcggccg agaccgacct
     3601 actgcgccac cagcgcgagg ccgccgtctc acgtgcgatc gacgcgcttc cgactcgccg
     3661 ccgagagacg ttcatcctgg cccatctgca tggcctgtca tatcaggaga tcgcgaccgt
     3721 catgggcgta tcgcccgcga cggtgaagaa ccaggtggcg gccgccctgg cccaactccg
     3781 ctcggctctg cgctcccacc tggaatagcg cgcaataggc cgatcgacgg cctcatccgt
     3841 ttcaggggag tcgatcatga cgtcagccga tcgggtcccc atggatgaag aactgttgtt
     3901 ccgggtcata cagggtcggg cgactccgac cgagcgcgac ggcgtcaccg gctggcgaaa
     3961 cgcatcccca gagcacgaag ctcgttttac cgaactgatc cagctgctcg gcttagcaac
     4021 cgaagtagat gctgggatcc gagtcggccc tccgcccaac gccaacgaca tcattcgact
     4081 ggcaagccat cgagcgcgca tcgtagcgcg cggtcactgg ttctggcgat tgggcgtggg
     4141 catcagcgcg gcggcggtgc tcgtgattgc catcggcatc taccggaccc gccaggccga
     4201 cccgcccgga ttcgtctttg gggccggtga gttcgtcacc ggcgtgaagg agacggcgac
     4261 ggttcagctg ggggacggct cggtggtgcg gctggccccc gccagccggc ttcgagtcac
     4321 gggcggccgg agtgagcgcg tcgtgtcgct cgaaggacga gcctacttcg ccgtggcgac
     4381 gatgagaggc cggccgtttc gggttcggac ccgggtgggt gcggtcaccg tgctcggaac
     4441 ccgtttcgac cttcaggcga gcgccgacac cctcgcactc gtcgtcgtcg aggggcgcgt
     4501 ggcgctttcg gcccggggcc aacaagcgac cctcgaatcg ggcgagcgga ccgagctcaa
     4561 gaacgggcgc ttgcttcgtc ccgccaaagt tgccgacgtc gcgcggtcgg tggcctgggc
     4621 cggcaacttc ctggtctttc aggccactcc actcagcagc gtggccgccg agatcgcgca
     4681 gcattaccac gtcacagtgg aaatttccga ccccacgctg gctaatcgga ccgtcactgc
     4741 gtggttgtcc gatcagagtc tggaccaggc catcaacgtc gtctgcacta tcgtcgatgc
     4801 ccagtgtgcg gtgcggaaca gcaccgtgat cgtgaggccg cggtgagatc gcatcgacgg
     4861 acaatctctc gtcacccggg gtgtcccgtg agacggatcc tgttgtttgc ctccctggct
     4921 gtcggcgccg ggccagtccc gactccggta tcggtcgctg cccagaccag tccacgaacg
     4981 attgccgcgg caaacaaggg aacgtcaacc gcgctgctga cccgcccggc ccggctcgag
     5041 atcgaggata cgccgctcga tcgcgcgctg accgagctct cgctcaagtc gggagtgccg
     5101 atctctttca gccccagtct cctgccgcat caaaccgtgc gttgctggtg cggggacgtc
     5161 acggtcggag gcgcgctcga acggctgctt gcgaaaacgt cactccagtt tacggagatc
     5221 gaaagtcagg tgctgatcca tccggaccgg cgccccaccc tgaccgaccc gctgcgatcg
     5281 acgccggcta cctcgctggc ctttggtgaa gcgagcattc gccttccacc tgcggccacg
     5341 gtcccatcga tccccgagcc ggtcgcaaag gcagcccggg caagatcaca gggagacctc
     5401 agggcgatcc gacaggcgac cgcgatctcc gggagagtga ccgatcaatc cagcggccag
     5461 ccactggtcg gggctcgggt ccaggcgatg ggcaccaact acgtcgccac caccaatcaa
     5521 caggggacct acaccattca gccggtgacc ccggggacct acaacctgcg gatcatcatg
     5581 ctgggatacg cctcacagca acggatcgtg acggtcggtc tgggagagac ggtaacagcc
     5641 gactggatcc tgacggcgat tccctttgcc ctcgacgaaa tcgtcaccac cacgaccggc
     5701 gagcagctca cgcgcgaact ggggcacacg gtgggacggg tggacgccgc gcgattggtc
     5761 gagagcgctc cggttactga cctgagcgat gtgttgaacg gtcgggtggc cggcgtgacc
     5821 gtgctcaaga acgacggcgt catcggtggc ggttcgcggg tgcgcatccg agggctcagc
     5881 agcgtctcgc tctcgaacga cccgctgctc tacgtcgacg ggatccgggt gagcgagcgg
     5941 gggcccgtcc tgcgactcag caacggcggc ttctctccgt cgttcttcga cgacatcaat
     6001 cccgaggaaa tcgaatcgat cgacatcgtg aaagggccat cggccgccac gctgtacgga
     6061 acccaggccg ccaacggtgt catccggatc accaccaaac ggggccggag cggccctaac
     6121 aagtggaccg tgtacaccga gcacggtgtt tttcatgatc ccagcgacta caatccgatc
     6181 tacttcgcca aggccaccgg ctccgccgcc caatgtctgc tgccatccca agccgcgggc
     6241 gagtgcgaga tcgaccgggt catcacgcgg aacctgatgc gggagccgga cttcacgcca
     6301 ctgcaggatg ccttccggca gcagtatgga gtgcaggtga gtggtggagc cgaggcactc
     6361 cggttcttcg cgggcgccga gctggaggac cagggcggtc tgctcaagct gcccgagtcc
     6421 gaggccgagt tccggaagga gctgctcggc gtttcatccc tgccgaaaga tgagaccgac
     6481 ccgagtcatc agcggaaggt caacctgcgg ggcaacctga acgccagcct cggctccaag
     6541 gccgatctga gcttcaacgc cgcgttcact aacaacaatc tgctcatccc ccaggtgggc
     6601 gataacggac gcagcctgct ctcgtccgcc ttgcaggcca cggccgaccc gaccgcatcg
     6661 actccgtacg gctttccggt ccgccccggc tatgcggtct cgctggtcga gcggcgccgg
     6721 agcaaccact tcatcaacag tgccaccgcc agctaccgtc ccaccaactg gctcacctcg
     6781 cgggcgaccg tgggtctgga ttacatcggc tttgaggact cggagctcga gcccaacggc
     6841 cgagcgtgtc cggtctgtgg ctcggccctg ggtttccgcg cgctccaccg atataccacg
     6901 tacaagtact cggtggatct gggctcgacc gcttccttca agctgtcgga gcggctcggc
     6961 tccaagacct cggtcggagc gcagtacaat aaggacaacg tcgtggccgc attcaacacc
     7021 ggccaggatc ttccgctcgg cgcggagacc tacagcggtg ccgccatcat aggctccacc
     7081 gagtcgacca ccaaggcggt gacgttgggg tcgtatctgg aggagcaggt gagtctggac
     7141 gaccggctgt ttctgacggg cgcgatccgg atcgaccgga acgcggcttt cggtcgtgcc
     7201 gcgagaacgg cacactatcc caagctgtcg ggggcgtggg tagcccgcga aggagccgga
     7261 gccaacgagc actcgtggct gggccagttg cgcctgcgcg cggcctatgg tcagagcggg
     7321 ctgcagcctg ggccgctcga tgcggttccg ttctacaacg gcgtgtcggt cgccctcttc
     7381 accggaaccg cgccgggcgt caccctgggc ggtgtcggga actcgagcct tcggccggag
     7441 cgttcccgcg aaatcgaagg cggcttcgac gcgaccctct tctccaaccg cgccaccctc
     7501 gagttcaccg cgtatgacaa gcgaaccacc gacgcgctgg tgcggcgtcc gctggccggg
     7561 tcggcaggag cggtagcgac tcggatcgag aacctgggtg tcgtctcgaa caaagggatc
     7621 gaggcctcga tcctggcccg ggtgatcgat gcgaccgatc tccagtggga catcgggctg
     7681 gaattctccg gtaaccggaa ccggctggtg gaactggccg aaggggttcc ctcaccgacc
     7741 ggcttcggct atcggcaggc catcggctat cccctctacg ggacttggtg gcccgccctg
     7801 gtctcgtttg acgacgccaa tggcgacggc atcatcgtcg ggagcgaggt cgtcacgacc
     7861 gacaccgcgg tgttcaatgg ctcgaccttc ccgacccgaa ccgccggttt cacatcgacg
     7921 gtgtcgctgt ttcgaagccg gctccgcatt ggcacccagc tcgaatacaa gggcgggttc
     7981 agggtcctcg atgtgaatac gctgttctcc tgcgggttgg gcccccgggt gaactgtcag
     8041 ggccttaacg atcccaacgc gtcgctggag gagcaggcac gcggagaggc agtcgcgaac
     8101 tacttcgcct tcggcgcgtt tgtcgacgac gccgattacc tgcgactgcg agaagtgtcc
     8161 atctcgtata ccctgccacc gtcgttcacc ggctggctgg gacccaaggc cacgaccgtc
     8221 acggtgaccg ggcgcaatct gctgctcttc accgggtttc gaggttggga tccggagggc
     8281 agtaccctgg ccggcaccac gccggatggg ccggtctaca acttctggca gccgggtcag
     8341 ccacgatcgt ttcttctccg cctcaatttc agcttttagg tcggagcatc ccatgcctac
     8401 gatacgatcg attgtcatca tcggctgtct cggtctgctg gccggctgtg acagcctcct
     8461 cgaggtcgag cggccagata tcatcgagcc gggcaaattg accggcgaag cgggggcgac
     8521 tgccgcttat aacggcgcca tcggcgattt tgcctcggcg ctcgccggtc ccggtgcggt
     8581 agcgggagtc gccagcaatt tcctggcata cgccggtctt ttcagtgacg aattccggtt
     8641 cgggtcgact ccaccggagg tcggccagtt cgaccagggc cgggtggtca aggaaaacac
     8701 cctgggccag gggatctatc tccaactgca tcatgctcgg gagtcggccg agcaagccgc
     8761 cgaacggatc gtggaattca agccgggtga ttcccgcgcc ggcgagctct acggtgtcgc
     8821 cgctctggcg acgctcctgc tcggcgagca ctactgctcc ggaatgccct tcagccaaag
     8881 tcagccggat atcatgtacg gccagccgct cagcacaacg cagatcttcg accgcgcgct
     8941 ggacctgctg cagcagggct cgaccaacat aggtggggtg gtgcggatag cgaacctgct
     9001 cgcggtccta aaagggcgag cgctgctcga ccagggagat gggcccgctg cgggcgcggc
     9061 ggtcacggcc gtgccaacca gcttctcata cgaagcgctc tacgccggcg gcaataccgc
     9121 cacccagaac ctgctccggt cccgttccta cgatggcggt gatctcttcg tggcggacaa
     9181 cgagggcggt aacggcctca atttcgcttc ggcggctgat ccccgagttc cggtggattt
     9241 ccccgctatc ccgccttaca acggaaccgg cgcgcgactc ctcatctaca acgacttcgg
     9301 cacgcccgtc gtccaggcga gcggtatcga agcgcgcctg atcgaagcgg aagccgcgct
     9361 ggaggacggc aacgtgagtg gctggctggc ccaactcaat acgctgcgtg atcttcaggg
     9421 actgactccc gttgccgatc cgggaactgc ggtcgcccgc atcgacctga cgttccggga
     9481 acgggcgttc tggctgtact cgaccggtca tcgggtgggc gacatgcggc ggctggtgcg
     9541 gcagtacaac cgcccggtga ctgccgtatt ccctaccgga ccttatcccg gcggcattac
     9601 ccgcggcaat caggcaagca tcgtcattcc caccaccgag gagaacaacc ctcactacca
     9661 ggcctccgat tgcgacccct cgaaggcgta actccgacgc gtatcaggat cctggccttc
     9721 ttcctgcttg cgtatgctct gacctggttc ggcaatctgg gcaacgtgat tcatccggct
     9781 gtatggtggc cccggccgat gtttgtgctc gggcccatcc tggcggcgcc gctcgtgatc
     9841 gggtggaccg aaggccgagc cggcctcctt gcctggtggc atcgaattct ccgtttccgc
     9901 gccccgggcc ggatctatgc tgccggcctg ctgattccgc tggcgatcat cgtgacctcc
     9961 gccgctctcg cggtggcggc cggggcatcc cttcccccga tcgccgcctg gaattgggga
    10021 gcgcttctgg tcgcgctgcc gatcgtgccg ctcggcggcc cgattcccga ggaaccggcc
    10081 ttccgagggt acgggcagca cgtcctgcag cagaccatgt ctccgctggc cgcgagcctc
    10141 tggatcgggc tgggcgtact ggtctggcat ctgccgattc tcatcatcgg cggcattccc
    10201 tggccgattg cggtcgcact gccggcggtg agcgttgtct atgcctggct gtaccaggct
    10261 ggcggcagca tctggccgct ggtgggtctg cacttcatcc agaacctggt ggggggaatg
    10321 ctgtttggcg ccatgttcga cggccggggc gacgtggtct ggaccggatt cctggccgcg
    10381 ctctatgtgc tctgggccct gatcctggcc tggaggctgg gtccgacgtt aggagctgcg
    10441 gtgcgaacga agtgaacccc acgatgacgt ggatccttcg cgctggcctg gccgggatgg
    10501 cgctgctggg cctgtctcgc gcggcagaaa cccaacaagg ccaagccggt ctcttggctc
    10561 ggatcgactc ggtggtggcg gctgaaatgc agcgaaccgg caccccgggt ctgactgtag
    10621 cagtggagca gcgaggggaa ctcctgctgg ctcagggcta tggattcgcc aacctcgagc
    10681 tgagtgttcc ggccaccgtc gagacgatct accagatcgc gtcgatcacg aagcagttca
    10741 ccgcgctcgc gatcatgcag ctggtggacc aggggaaggt caggctcacc gatgagatca
    10801 cccggttcct ccccgactat ccggctcagg gccatcgcat caccatcgag cacctgctga
    10861 ctcatacctc gggaatccgg gattacaccg gcctgggtcc ccggttctgg agcgagctgt
    10921 cacggcttga cttgagcaag cagcagatgc tcggcctgtt ccaggatgag ccgttcgact
    10981 tcaaccctgg ggagcagtac cgctacagca actcgggata cttcctgctc ggtctcatcg
    11041 tcgagaaggt gaccggatcg tctctttcga agtacttcga ggaaaatatc ttccgggcat
    11101 tgggactccg gtcgacgtcc tactgtgact tccgggcgat cgttccccgc cgagccagcg
    11161 ggtacgccgt cgtgtccggc aacgtgatca acgccccgcc gatcagcatc aacgtgatgg
    11221 gcggtgcggg cgcgatctgt tctaccgtgc tggacctgct ggtctggcaa cgggcattga
    11281 atcaggcccg tttgctctcg cccggatcgc gcgatcggat gcgaaccgcg gccactctca
    11341 acgatggcaa gtcgaccggc tatggctttg gcctggggtt gggcctggtc gacggccacc
    11401 gtctgatcgc ccacggcggt ggcgtcaacg gcttcatgag ctggctgggc cattacccgg
    11461 aggacgatct taccatcgtc gtgctgagca acaccggaag cgtgccggcg aagaatgtcg
    11521 gtcgccagat cggtcgagtg gtgctgcagc tgccgttact taccatggtg gatccgccac
    11581 tcttctgacc tcgagagtaa ggggctcggc tccctcccgg gtgaagcaac gctcccagag
    11641 gaagaaggcc aggatcctga agctggggtc tcccgggaga accagatcga ccgcctggtc
    11701 ctgggtgtcg cagaagccga ggcggttgtg acaccactgc tcgatccacc cgggtggggg
    11761 agcgacgatg caattgctga cgctgcataa ctcctggacg tgggccggtc tcgaccaggt
    11821 cggggggccg ttgggtattc ttggggaggt aaccgacaaa gcaaaaggtc acgctggcgc
    11881 cacgctggtc cgagggtcga ggacgacggt tgccgtatcg tggatcgggg tagcgatccc
    11941 taagggctct gcaaagcgag agaccgctcc gctgaggata tccagttcgg tcggccctcc
    12001 cgactcgagg tcggccagaa aactcggctt catcccggac ggcaacccat cgagcacact
    12061 catgactcgt gtcgcctcgt cgtcggggaa tgggattccc cgggcgcggc ctacggccac
    12121 cacttcggcg gtcgcgcgtt ccaggagccg ccgccccagc cgatggctga ggagcggccc
    12181 gatggcagag cgcgccagcc cgcagcccgc ggccagcgcg gtgatgaaca cgaacttccg
    12241 ccatagatcc agctggatgt tctcggagac gcgggcctcc gcccctgcct caccgaacgc
    12301 ggcggcgatg cgatcgaccc gcgcgctggc ctggccgtcg aattccccca cgactacgga
    12361 ttgaaaggag ctacgccgct ccacgacacc cggtgccacc cgaatgacgc tgatcctggt
    12421 gaggccaccg atcacggcgg ccggcggcac gccgaggtcc accaatcgct cggctgtgtc
    12481 gacgccgttg agtagcggca cgatgaccgc cccctgttcg gcgcagaatc ggacggccga
    12541 agcgatccct tcgagcgagt agcttttgac cgcgaggatg gcgaaatcgg ctggtcccag
    12601 cttttccgtc cggtccgtgg ccgccacgct tgcgtggaac gtgccctccg ggctcttgat
    12661 ctcgaggcca tgctggcgca acgcgaccag attcgctccc cgggcgtagc aggcgacctc
    12721 atggcccgcc cgcgacagct gtccgccata gtacgcgccc accgcgccgg cccccagcac
    12781 cacaactctc atgtcgtgcg ttcactgtga tccgtggctc aacgttcggc ggacgccagg
    12841 gccatagcaa gggcgccgcg acgaggtagg tcgggaaaga ggagcagttg cagcggctaa
    12901 gcgtgaccgg ctagcccgtc agtgtggcgg gccgcgccgg agccggtggg gtgatcccga
    12961 tcggttccct cagtcggtac attcccggga gcgtccactt gtgcacatcg cgcttcacca
    13021 gctcggcctt gttggttgac agctcgatgg cggccgtgag gtcacccaat cggacctggg
    13081 tgatcctggc gtcctcgatg atgagcatgg ccccgtgaaa agtgaacgtg actgatgcgg
    13141 tgatcaccag cttgggcag
//
LOCUS       DASWKS010000391         3614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2796184, whole genome shotgun sequence.
ACCESSION   DASWKS010000391 DASWKS010000000
VERSION     DASWKS010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3614
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2796184"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VGA78_11075"
     CDS             complement(<1..914)
                     /locus_tag="VGA78_11075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894458.1"
                     /translation="MFRAPLLPLSWLLLAGAVSAQVPEVRLARAEARYPKELSSVTGL
                     LELPDGRVLVSDGIDQTLLRIDLRSGKTDTVSRMGAGPGEYKGPDLLFGTPGGGVLLL
                     DLGNARLSFFDAALKYLESSPVTRGNPATGLTMVIPDGVDGEGRVYFRSMMRAPDGRA
                     DSGAVVRWDRVRNAYDTVAKLKLSEVKVSSSGGANNRNVSMRPVPLSPEDVWSVAADG
                     RVVVVRVTDYHVEWIRPGSPAIRGPVNPWQPVPIRDADKRAWAAELRATGLATQVQSE
                     NGRMSVRIGRGLAGAATPAGRPGEIPNL"
     gene            1088..1360
                     /locus_tag="VGA78_11080"
     CDS             1088..1360
                     /locus_tag="VGA78_11080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894459.1"
                     /translation="MPLITMPAARLERETRRAAENLSADRAWRRNRMWHVVAGALCVA
                     AGLVISGAAFAVNDRDLGNLLIVAGVTIGDVGVLAVVMVYAYTSER"
     gene            complement(1450..2415)
                     /locus_tag="VGA78_11085"
     CDS             complement(1450..2415)
                     /locus_tag="VGA78_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894460.1"
                     /translation="MRARAASPCLVCGRSEPLGLPVCAACGGTREDVADQLLFVLPPR
                     EPHRRRQLRARLAALTGRPSRSEALDSTARGLRALARIPAAAAPEVVARLEDQGVTVH
                     ATRADRSWAAIPLSFIFLLAGAAGAGLMAGLRGSVGFLVLTPVFTALIAWSAARGVRS
                     PVYPDQAERGAPPVLVKVLAELPPGQARDLIAELSQAARKILTPESRLELPAGLLRTF
                     DELLPTAAEAATDLAALDRTLADFETRGRDGAALPDTWRQGRMELQQCRARLAGYLLE
                     VTGLVGRLQGMSADGLSSASARLRELVRELREQATVNGNPVNGER"
     gene            complement(2416..2982)
                     /locus_tag="VGA78_11090"
     CDS             complement(2416..2982)
                     /locus_tag="VGA78_11090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894461.1"
                     /translation="MSRFHYFSVLAWLAAALLVLGGTSAVPAALPAIDPVAITGPEAW
                     FRQVKPSCNSLEVELALRAFPPPESVDGTGYAAACLALAGRIDDARARIIAVEAADRW
                     KAAGIVFDIGHPIADAGDDRSAGPIMGLVTEFWPNHYMALYHAGMANYAIGQPGLART
                     QLREFLELYQQKDGWRTNALEILERLER"
     gene            complement(3136..3393)
                     /locus_tag="VGA78_11095"
     CDS             complement(3136..3393)
                     /locus_tag="VGA78_11095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894462.1"
                     /translation="MQQQAYDAGTVEVVWRKGREIPGLPSSIWRRDRFGATIRRFDYG
                     TESDYGWVVDQRPAFLGIGLTMERLQPLQWRNATPDLSDSW"
BASE COUNT          608 a         1191 c         1252 g          563 t
ORIGIN      
        1 tcgaggttgg gaatctcgcc tggccgcccc gccggcgtgg cggcgccggc gaggccgcgg
       61 ccgatgcgca cgctcattcg gccgttctcg ctctgcacct gcgttgccag cccggtggcg
      121 cggagctccg cggcccaggc gcgcttgtcc gcatcacgga tcggaaccgg ctgccagggg
      181 ttgaccggtc cacgaatggc gggactgccg ggtcggatcc attcaacgtg atagtcggtc
      241 acccggacca ccaccacccg gccatcggcg gcaaccgacc acacgtcctc gggcgacagc
      301 ggcaccggcc gcatcgacac attgcggttg tttgccccgc cggagctgga gaccttcact
      361 tcactcagct tcagcttggc cacggtgtcg taggcgttcc ggacccggtc ccagcgaacc
      421 acggcaccgg agtcggcccg gccatctgga gcccgcatca tggaccggaa gtacactcgg
      481 ccttcgccgt caactccatc cgggatgacc atcgtgagcc cggtagcggg attgcctcgg
      541 gtgaccggag aggattccag gtacttgagg gcggcatcga agaaggacag gcgggcgttg
      601 cccagatcca gcagcagcac gccaccgccc ggggtaccga acagcaggtc gggtcccttg
      661 tactcgcccg gccccgcgcc cattcggctc accgtgtcgg tcttgccgct gcggagatcg
      721 atccgcagca gggtctgatc gataccgtcg gacaccagaa cccggccgtc gggcagttcc
      781 aggagtccgg tgacggagct gagctccttc ggataccggg cctcagcccg agccagccgc
      841 acctcgggga cctgggcgct gaccgcgcca gctagaagga gccaggagag aggaagcaat
      901 ggagcgcgga acatggcgtt cactcgtggg ggtcgccagc taagatgcgc gcctcgcccg
      961 gcccgtcgca ccggggcctc agtgaacggt caacagtgaa cggtcaacag tgaacggtga
     1021 acggccaagg gtggttcacc gttgactgct taccgtttac cgggattggc cctggtatct
     1081 tgttttcgtg cctctgatca ccatgcccgc cgctcggctg gagcgcgaga ccaggcgagc
     1141 cgccgaaaac ctgtccgcgg atcgcgcctg gcgccggaat cggatgtggc atgtggtcgc
     1201 cggggcgcta tgcgtggcgg caggcctggt gatatcgggc gcggccttcg cggtgaacga
     1261 ccgtgacctg gggaacctgc ttatcgtggc gggggtcacg atcggcgacg tgggggtgct
     1321 cgccgtggtg atggtgtacg cttataccag tgaacggtga acggtgaaca gtgaacggtg
     1381 aacagtgaac ggtcgaaaca ccggcgctcc gcgaggttca tcgttcacgg tctcacgcaa
     1441 ctctcccgtt caccgttcac cgttcaccgg gttgccgttc accgtggcct gctcccgcag
     1501 ctcacgcacc agctctcgca ggcgagcgct ggccgaggac aatccgtcgg ctgacatccc
     1561 ctgcaggcgg cctaccagtc cggttacttc gagcagatat cccgccaggc gggctcggca
     1621 ctgctgcaat tccatcctgc cctggcgcca ggtgtcgggc agtgccgccc catcacgacc
     1681 gcgggtttcg aagtccgcca gcgtgcggtc cagcgccgcg aggtcggtcg cggcctccgc
     1741 ggcggtgggg agcagctcgt cgaaggtgcg gagcagtccg gccggcagct cgaggcgcga
     1801 ttccggggtc aggatcttcc gcgccgcctg actcagctcc gcgatgagat cccgggcctg
     1861 acccggaggc agctccgcca gcactttcac cagcaccggc ggcgcgccgc gctcggcttg
     1921 gtcgggatag accggactgc gcaccccccg ggccgccgac caggcgatca acgccgtaaa
     1981 cacgggggtg aggaccagga acccgaccga tcccctgagc ccggccatca gaccggcacc
     2041 ggccgctccg gccaggagga agatgaatga gagcggaatg gcggcccagg accggtcggc
     2101 ccgagtggcg tggaccgtga ccccctggtc ttccagccgg gcgaccactt caggggcggc
     2161 ggccgccggg atgcgggcca gggcgcggag cccccgggcg gtggagtcga gggcctcgct
     2221 ccgggagggg cggccggtca gggccgccag tcgagcccga agctgtcgcc ggcggtgcgg
     2281 ctcccgaggc ggcagcacaa agagcagctg atcggccacg tcttcccggg tgccgccgca
     2341 ggcggcgcaa accggcagac caagcggctc cgagcgaccg cacaccaggc agggactcgc
     2401 ggcgcgggcc cgcacctacc gctccaggcg ctcgaggatc tcgagcgcgt tggttctcca
     2461 gccgtccttc tgctggtaca actcgagaaa ctcccgcagc tgggtgcgag ccagcccggg
     2521 ttggccgatg gcatagttgg ccatgccggc gtgatacagc gccatgtagt ggttgggcca
     2581 gaactcggtc accaggccca tgataggacc ggcggagcgg tcatccccgg cgtccgcgat
     2641 gggatggccg atgtcgaaga cgatccccgc ggccttccat cgatcagccg cctcgaccgc
     2701 gattatcctg gcccgggcgt cgtcgatgcg accagcgagg gccagacagg cggcggcgta
     2761 accggtcccg tccaccgatt ccggtggcgg aaaggcccgg agcgcaagct cgacttcgag
     2821 gctgttgcaa gagggtttga cctgccggaa ccaggcctcc gggccggtga tcgccaccgg
     2881 gtcgatggcc ggcagggctg ccggcaccgc cgaggtaccc cccaggacga ggagggccgc
     2941 ggccagccag gccagcaccg agaagtagtg gaaccgtgac atcggccatc cgagaggcaa
     3001 agactgttcc gggagagtgc cggagcgggc cgagttgcac ggcccctgtc ccgcgggcgg
     3061 atgcggaagc cgcgcaacac cttgggggcg ctgcgcggcg tgggaccggt actgcggctg
     3121 gggggagggg ctgggctacc agctatcaga cagatcgggc gtggcgttcc gccactgcag
     3181 cggctggagc cgttccatgg tgagcccgat acccaggaag gccgggcgct ggtccaccac
     3241 ccaaccgtag tcggactcgg tcccgtagtc gaagcggcgg atggtggcac cgaagcggtc
     3301 gcggcgccaa atgctggagg gaaggccggg gatctcccgg ccctttctcc agaccacttc
     3361 cacggtcccg gcatcgtaag cttgctgctg catgtatcta tggtctcgaa ttggcttcct
     3421 ttcgacaagc tgacaccggt gagagggggt accctatcaa gcctgatagg ttcaatcggg
     3481 atggtactat cttgtcgatc aagcgattag ccgaacgaat aagaatgttc tcaagtacac
     3541 tctatcaaga gtgatagggg ataccctatc aagggtgata gttgttggta gcgcccgttt
     3601 tgcctaacat ggtg
//
LOCUS       DASWKS010000392         9953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1306631, whole genome shotgun sequence.
ACCESSION   DASWKS010000392 DASWKS010000000
VERSION     DASWKS010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9953
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306631"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..1194)
                     /locus_tag="VGA78_11100"
     CDS             complement(52..1194)
                     /locus_tag="VGA78_11100"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9894463.1"
                     /translation="MKLLVLGAGLQGGACAWSLLRNPAVTQVTLADRYPDRLPPFLAN
                     AGERLRPVRLDAADHPGVLATMRGHAAVMCALPYYFNEPMTRLALEAGCHFSDLGGNT
                     RIVLQQKQQHQAAMAKGLSVIPDCGVAPGMVNILAAEGIRRLDRTASVKIYVGGLPQE
                     PKPPLNYMIVYSLEGALDYYTTPSWILREGKAVQVDALTELEDVAFPAPVGTLEAFHT
                     GGGISTMPLTWEGKVDTMEYKTLRYPGHAAIMRPVRDLGLISNQPIEVKGQRVVPRDV
                     FIAAVTPSLQKPDGRDLVALRVAVTGTRNGAEARTEFDLLDWYDGAHGISAMMRTTGF
                     SLSLTGQLQTQGATARGVLTPDESMPFRPYLEGLASHGVRITERAE"
     gene            1540..2115
                     /locus_tag="VGA78_11105"
     CDS             1540..2115
                     /locus_tag="VGA78_11105"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEX9894464.1"
                     /translation="MELQLQITARNITLSQDVEDAIRREASKLEDFYPRIMGCRVLIE
                     PEHRFAAGEVGRYGVRIDVTVPKGELLTTRQSHEGVWTAVQRAFDAAQRQLEDYARVQ
                     RGDVGARPSEPRARVRILFPWEGYGFLETTDGREIYFHRNSVLNQGFDRLEIGSEVRF
                     AEEQGEKGPQATTVALVTRTRHPPRQPQAEA"
     gene            2152..2808
                     /locus_tag="VGA78_11110"
     CDS             2152..2808
                     /locus_tag="VGA78_11110"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9894465.1"
                     /translation="MPASAPPRRGAATRARLISAALELFATRGYHATTTALLAERTRI
                     AEGTIYRHFPGKDALYSAVCRSVWERLDEHLEASLALRLPTRDRLADAARNLVRAAEL
                     DPAAIRLQSRPLELAVLDDLARDARLEFRDHVTQLVAAGKQEGAIRAGAAEWWGSLWL
                     AVVWSTCERVAGGELTAEHPNVGLAIDAAWDMVRSDRDESARQAESAETTGGSPMGAD
                     "
     gene            2840..4207
                     /locus_tag="VGA78_11115"
     CDS             2840..4207
                     /locus_tag="VGA78_11115"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9894466.1"
                     /translation="MTGPSSSATILCVDDEPAVAALLERVLTEAGYRVMLAGSGKEAL
                     EVIDRSPVDLILADYNMPQMTGLELLRQLEERSHRIPVVIVTGYATVEDAVLCIRSGA
                     VDYITKPVRSDTLAITVLHALEFARLRRENEAFRTELSRIRSRRALVGNSQPMRRLYE
                     TVATVAPTWATVLLEGESGTGKELFARAIHEQSPRRDAPFITVNCAALPEGLVESVLF
                     GHEKGAFTGATTRASGAFERAHRGTLLLDEVSEMRLDLQAKLLRVIQEQEFERVGGRE
                     SIKVDVRLVATTNRDLKAEVDAGRFRADLYYRLNVMPIRTPPLREREGDIALLAHYFV
                     KVAAERLGVESPSMTPEAIDVLQQHDWPGNVRELSNVIERAVILSRGAAIDADALRPH
                     VSRPASASAVPAPAELPLDLASLEQIAIERALAATSGNRTRAAQLLGISERTLRTKLN
                     PPRSA"
     gene            4418..4822
                     /locus_tag="VGA78_11120"
     CDS             4418..4822
                     /locus_tag="VGA78_11120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894467.1"
                     /translation="MTRKQRTTATICLALLAAACTTPAEPRDLGEPMATPAIWSTYWG
                     EVWARCGSTLRGRPAYHYNELEFRVVPGSSIPWEGRMALGVWEGNRIYLAETMVSVPL
                     VVRHEMLHAQLGKAGHPAIFATCDSIAAKVMP"
     gene            4819..5040
                     /locus_tag="VGA78_11125"
     CDS             4819..5040
                     /locus_tag="VGA78_11125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894468.1"
                     /translation="MTARANLSIGPGAVRAGVDTHEALRLACLAQEAGVEDRHPEEGA
                     GTSSHTGEAAPSIVAEPQAAPPYRGRVSQ"
     gene            complement(5016..5702)
                     /locus_tag="VGA78_11130"
     CDS             complement(5016..5702)
                     /locus_tag="VGA78_11130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894469.1"
                     /translation="MVIVGEASDGQTDLFALGAQGGEATRFSFTRMKEYAPALHPAGT
                     VVAFLRRAPGAIDSSPATLVVLNLLNSAERQTALPADIGVPRRIGWSPDGAMLYVLGD
                     VGIAGSAAPPATMTFVPVDTAGPGWAAADTATSVLLGLPVVARVETCARDCISSVAKP
                     WCILTPDGRRQELGRVVTPFRWGTDSLAFFEGDRLLVYPLGGGRPRRMEWTRAPERPR
                     DGSYWETRPR"
     gene            complement(5858..6658)
                     /locus_tag="VGA78_11135"
     CDS             complement(5858..6658)
                     /locus_tag="VGA78_11135"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9894470.1"
                     /translation="MRRTAGLASYVIVAALAAGAGAFGVWLVRERPRLDPVTTHGEWV
                     WIKRASDSVRAYVAYPERRDPAPAVIVIHEIFGLTDWEPTVGDKLAGNGFVAIVPDML
                     SSRFGISPGSPDSGRKLMAQLTPEGITADLNAAYEYVNGLPAVRKDRVGVIGFCWGGG
                     QTFRYATNNPRLKAAVVCYGPSPDTTTLERIQATILGVYGENDARVNTPLPTVARIMK
                     EKGKRFEADSYPGTGHGFLKPGRKGSETNQVQKAWDKILAFFGAELGK"
     gene            6895..7416
                     /locus_tag="VGA78_11140"
     CDS             6895..7416
                     /locus_tag="VGA78_11140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894471.1"
                     /translation="MLPPDRRSFLARLSGALALLTTGTTDIVASESNGKRPSVRQPVR
                     PSEWDDSWLEGLTTGHKQIFDIPGHLNGGALFYCNNYLRGLEASGIPTGDIQAVLGLH
                     GSAIPLALTDPLWARYKLGEMFRINDPRTKTASVRNLWLAAIRKQGAGSRKQGAASRK
                     QGAGSRKQESEPR"
     gene            complement(7484..8911)
                     /locus_tag="VGA78_11145"
     CDS             complement(7484..8911)
                     /locus_tag="VGA78_11145"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX9894472.1"
                     /translation="MTTPAKILFAHDDHAFGRTLGWILDEHGYAVTAVPATDAVLETM
                     AEDPHDLLVLETASGEAGMRLLARIKGDERFESLPVLMLSSLPPEEGSVEALGLGATD
                     FLARPFRVREILARVKAHLRAGRELNRARAEARSRSEMIEILREIASSLSPDEIYQIL
                     VRRVAQGLGISRCSILLRGPDEGVATVVAAFENPMLRNLRVELRRYPEIERAITSGEV
                     VLSDSIESDPLFAETRRQWQQEGKAVETTSALAIPFMVQGRQVGVFYLRTSGHDAVLN
                     QLDVQFADQVIKSAVTTIEKAYQIQAAVEGERQMKELAETDPLTGLFNRRALESRLSR
                     ELEQAQRFSTVLSCLMIDVDNFKQTNDTLGHQMGDLVLAQLANLLKREQRAIDVVARF
                     GGEEFCVLLPLTGSGGARLLADRILRRIASHPFGEVEKPVPITVSIGVATYPDDRVTD
                     GTSLLRLADQNLLKAKADGRNRYRD"
     gene            complement(8915..9883)
                     /locus_tag="VGA78_11150"
     CDS             complement(8915..9883)
                     /locus_tag="VGA78_11150"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HEX9894473.1"
                     /translation="MTTAAPPVPTLDEIRQAAEALREVAPPTPLVETADLSRRASQPV
                     FLKCELWQPMGAFKMRGAWTAITRLSPEAKARGIITHSSGNHGQAVAFTAQKLGLRAV
                     IVMPRTAPAIKVEGVRRYGGEVVFTDAISSARLQRAAEVAAEEGLTMVPPYDDPNIVL
                     GQSTCAFEVLQSHPEISTFLAPIGGGGLLAGTCVTVIHGRPDARVVGVEPEGAAKLSA
                     ALEAGHPVALESTASLADGLLPLSVGTLTFEYIRQVVREAVRVTDEEIGAAVRYLWRE
                     QGLRVEPSGAVGVAALLAGKFKPKTPTAILLTGGNVDPALFQKLVA"
BASE COUNT         1647 a         3339 c         3308 g         1659 t
ORIGIN      
        1 cctgcttcct gcttcctgct tcctgctccc tgcctcctgc ttcctgcttc ctcattcggc
       61 gcgttccgtg atccggaccc catggctcgc cagcccttcc aggtagggcc ggaacggcat
      121 ggactcatcg ggcgtcagaa cccccctggc tgttgccccc tgggtctgta actggccggt
      181 gagcgacaac gaaaagccgg tggtccgcat catggcgctg atgccgtggg ctccgtcgta
      241 ccagtccagc agatcgaact cggtgcgagc ctcggccccg ttgcgggtgc cggtcaccgc
      301 cacccgcagc gccaccagat cgcgcccgtc gggcttctgc aggctgggcg ttaccgccgc
      361 gatgaacaca tcgcgcggga ccacccgctg tcccttcacc tcgatcggct ggttgctgat
      421 caggcccagg tcccgcaccg gccgcatgat ggccgcgtgg ccggggtagc ggagcgtctt
      481 gtattccatg gtgtccacct tgccctccca ggtaagcggc atggtgctga tgccgccgcc
      541 ggtgtggaac gcttccagag tccctaccgg ggcggggaag gcgacgtcct cgagctccgt
      601 gagcgcgtcc acctgcaccg ccttcccctc gcgcaggatc caggacgggg tggtgtagta
      661 gtcgagcgct ccctcgagcg agtagacgat catgtagttg agcggcggct tcggctcttg
      721 cggcagccct ccaacgtaga tcttgaccga cgccgtccgg tccaggcgcc ggattccctc
      781 cgccgcgaga atgttcacca tcccgggcgc cacgccgcag tccggaatca cggacagtcc
      841 tttcgccatc gcggcctggt gctgctgctt ctgctgcagc acgatccggg tgtttccacc
      901 cagatccgag aagtggcagc ctgcttcgag cgccagccgg gtcatcggct cgttgaagta
      961 gtagggcagc gcgcacatga ccgcggcatg gccccgcatg gtggcgagca cgccgggatg
     1021 atcggcggca tcgagccgca ccggacggag tcgctcgccg gcgttggcca gaaacggcgg
     1081 caggcgatcg ggatatctgt ccgccagggt cacctgcgta acggcgggat ttcgcagcag
     1141 actccacgca caagcgccgc cctgcaggcc ggcaccgagc accagcagct tcatcgggat
     1201 cgctccgcga tagtcgcgag tcgcgagccg cgagggtcac gagaccgccc ggcagcacca
     1261 ggcagagccg ctcgactcgc gaatccggac tcgcggaggg ttgtgaacgg tcggggaaaa
     1321 gccaccaaat ctaatgggcc gatccttcct gattcaaacc cgctccaccc agcctccgcc
     1381 cggggtcggt ccaggcggat ttcggtccga cggcggttgc tggcccacga ccggtcgggc
     1441 gggtagaatc cccggtacac cactgcgtca gggggttacc cgccttctca cccgatcatg
     1501 cgaatgttga tgggcaccgg gtttcgcaca ggaggttgca tggagctgca attgcagatc
     1561 accgctcgca acatcacact gtcccaggac gtcgaggacg ccatcaggcg tgaagcgtcc
     1621 aaactggagg atttctaccc gcgcatcatg ggatgccgag tgctgataga gccggaacac
     1681 cggtttgccg ccggtgaagt tggtcggtac ggagtccgca tcgacgtcac ggtgccgaaa
     1741 ggcgaattgc tgacgacccg gcagagccac gaaggggtct ggactgccgt gcaacgcgcc
     1801 ttcgacgccg ctcagcggca gctggaagac tatgcccggg tgcaacgggg cgatgtgggg
     1861 gctcggccgt cggagcctcg ggcccgggtc cggatcctgt ttccgtggga agggtacggt
     1921 tttctcgaga cgacggacgg tcgggagata tactttcatc gcaacagcgt tctgaatcag
     1981 ggattcgacc ggctcgaaat cggatcggaa gtccgattcg cggaagagca gggcgagaag
     2041 ggtccccagg cgaccaccgt ggcgctggtg acgcgcaccc gccaccctcc ccgccagcca
     2101 caggcggaag cgtgaccggg aggcggccgg gaatctgata gattccccgg gatgcccgcg
     2161 tcagcgcctc cccgccgagg ggcggcaacc cgggcgcggc tgatttcggc cgcgctcgag
     2221 ttgttcgcca cccgaggtta tcacgccacc accaccgcgc ttctggcgga acgaacccgc
     2281 atcgccgaag gcaccatcta tcgtcatttc ccgggcaagg acgcactcta cagcgcggtc
     2341 tgccggagtg tgtgggaacg actggacgag cacctggaag cgtcgctggc gctgcgcctc
     2401 cccacccgcg accggctggc cgacgcggct cgaaacctgg tgagggccgc ggagctggac
     2461 cctgcggcca tccggttgca aagccgtccg ttggagctcg ccgttctgga cgacctcgcc
     2521 cgggatgccc ggctcgaatt ccgggatcac gtgacccagc tggtagccgc cggcaagcag
     2581 gaaggagcca ttcgtgccgg tgcagcggag tggtggggct cgctctggct ggcggtcgtc
     2641 tggtcaacct gtgagcgggt ggcgggtggg gagttgaccg cggagcaccc caacgtcggt
     2701 ctggccatcg acgccgcgtg ggatatggtc cggtccgacc gagacgagtc cgcgaggcag
     2761 gcggagtcgg cggaaacgac cggtggcagc cctatgggtg ccgattagat tcggcagcga
     2821 gcccaccgat ggagcttgag tgaccgggcc ttcttcttcc gccactatcc tctgtgtaga
     2881 tgacgagccc gccgtcgcgg ccctgctgga gcgggtgctc actgaggcgg gctaccgggt
     2941 gatgctggcc ggcagcggaa aggaagccct cgaggtcatc gatcggtcgc cggtcgatct
     3001 gattctggct gattacaaca tgccccagat gacggggctg gagttgttgc ggcagctgga
     3061 agagcgatcc caccggattc ccgttgtcat cgtcaccggc tacgccacgg tggaagacgc
     3121 cgtgctgtgc atccgaagcg gcgcggtgga ctacatcacc aaaccggttc ggtcagatac
     3181 cctggccatc accgtgctgc acgcgttgga gttcgcccgg ctgcggcggg agaacgaagc
     3241 cttccggacc gagctgagcc ggatccggtc gcggcgcgcc ctggtgggaa acagccagcc
     3301 gatgcggcgc ctctacgaga ccgtggccac cgtcgcgccc acctgggcga ccgtgttgct
     3361 ggagggcgaa tccggcaccg gcaaggagct gttcgcccgc gccatccacg agcagagtcc
     3421 ccggcgagac gccccgttca ttacggtcaa ctgcgccgcc ctgccggagg ggttggtgga
     3481 aagcgtgctg ttcggtcacg agaagggtgc ctttaccggc gccaccaccc gggcgtcggg
     3541 ggcattcgaa cgggcccatc ggggcaccct gttattggat gaagtctcgg aaatgcgact
     3601 ggacctgcag gccaaactgc tccgggtaat ccaggaacag gagttcgagc gggtcggcgg
     3661 gcgggaatcg atcaaggtgg acgtccggct ggtcgcaacc accaatcgcg acctcaaggc
     3721 cgaagtcgac gccgggcgct tccgtgcgga cctgtattat cggctcaacg tgatgccgat
     3781 tcggacaccg ccgctgcggg agcgggaggg tgacatcgcc ctgctggcgc attacttcgt
     3841 gaaggtggcc gcggaacggc tgggcgtcga gtcgccgtcg atgaccccgg aagcaatcga
     3901 cgttctgcag cagcatgact ggcccggcaa cgtacgggaa ttgtccaacg tgatcgagcg
     3961 ggccgtgatc ctctcccggg gagccgcgat cgacgctgac gcgctccggc cccacgtcag
     4021 ccgcccggca tcggcctcgg cggtcccagc gcccgccgag cttccgctgg acctcgccag
     4081 cctggagcag atcgcgatcg aacgggccct cgccgccacc agtggtaacc ggacccgggc
     4141 ggcgcagttg ctgggcatca gcgagcggac tctccggacg aaactcaacc ctcctcgatc
     4201 agcctgagcc gacaccggtc cgaacccggt cggtggcacg accccgaacc ggcggcagag
     4261 tttgccggag ccatttgccc aggcggtcgc gacccgatcc gatgcggtat cacaacccac
     4321 tgcagttcaa tgggttgcca tcgaccgatt ctggtcggta gcggggcatg acgcttgcac
     4381 gtttgatccc cgagcagatc ctcgggatcg agttgagatg acgcgaaagc agcgaaccac
     4441 cgcgactatt tgcctggccc ttctggccgc ggcctgtact acaccggcag agccccggga
     4501 cctgggggag ccgatggcga ctcccgccat ctggtccacc tactggggcg aggtgtgggc
     4561 ccgctgtggc tcgacccttc ggggcaggcc ggcgtaccac tacaatgaac tcgagttccg
     4621 ggtcgtgccc ggttcatcga ttccgtggga aggacggatg gccttggggg tgtgggaagg
     4681 gaaccggatc tacctggccg agaccatggt cagcgtcccg ctggtagtgc ggcacgagat
     4741 gctgcacgct caactgggca aggccgggca tccggccatt ttcgccacct gtgactcaat
     4801 cgccgccaag gtgatgccat gaccgcgaga gcgaatcttt ccatcggacc gggggcggtg
     4861 cgcgcggggg tggatactca tgaggcgctg cgcctcgcct gcctggcgca ggaagccggg
     4921 gtggaagacc ggcatccgga ggaaggggcc ggtaccagct cgcacaccgg cgaagcggct
     4981 ccatcgatag tggccgagcc gcaggccgca ccaccctacc ggggtcgggt ctcccagtag
     5041 ctgccatccc gcggccgttc cggcgcgcgg gtccactcca tccggcgggg ccggcctccg
     5101 cccaatggat agaccagcag tcgatcccct tcgaaaaacg ccagggagtc cgtcccccag
     5161 cgaaacggcg tcaccacccg tcccagctcc tggcgccggc cgtccggcgt caggatgcac
     5221 cagggcttgg ccacggaaga aatacaatcc ctggcgcagg tctccacccg ggctacgacc
     5281 ggcagcccca gcagcacgct ggtcgctgtg tcggcggccg cccaaccggg gccagccgtg
     5341 tcgaccggga cgaaggtcat cgtggccggg ggcgctgcag agcccgcgat ccccacgtca
     5401 cccaggacgt agagcatggc gccgtccgga ctccagccga tccggcgggg caccccgatg
     5461 tccgccggca gtgccgtctg gcgttccgcc gagttcagca gattgagcac gaccagggtg
     5521 gcgggggagc tgtcgatcgc gccgggtgcc cgccgcagaa aggcaaccac cgttcccgcg
     5581 ggatgcagcg ccggcgcata ctccttcatc cgggtgaagc tgaaccgggt cgcttcaccg
     5641 ccctgggccc ccagcgcaaa gagatcggtc tggccatcgg acgcctctcc gacgatgacc
     5701 acgaacgact cctcgcccac cgaaacctta ttggtgaggg gggaaaggga ctgacaagcg
     5761 gagagcagaa tgcagagcgc agaatgcaga atgtagggtg cagtggggtt acccctctgc
     5821 gatctgcact ctgcactctg cactctgcat tctgttgtca cttgcctaac tcagcaccga
     5881 agaacgccag tatcttgtcc caggccttct gaacttgatt ggtttcggat cctttccgtc
     5941 ccggtttcag gaacccgtgc ccggtgccgg gatagctgtc ggcttcgaac cgcttgcctt
     6001 tttccttcat gatacgggcg acggtcggga gcggggtgtt gacccgggca tcgttctcac
     6061 catacacgcc cagaatggta gcctgaattc gttccaacgt ggtggtatcg gggctgggac
     6121 cgtaacagac cacggcggcc ttgagcctcg ggttgttggt ggcgtagcgg aaggtctggc
     6181 ctccgcccca gcagaacccg atcaccccga ctcggtcctt ccgcactgcc ggcagtccat
     6241 tcacgtattc gtaggccgcg ttgagatcgg cggtaatgcc ctcgggggtg agttgcgcca
     6301 tgagcttccg gcccgaatcc ggggacccgg ggctgatgcc gaagcgggac gagagcatgt
     6361 cgggcacgat ggccacgaaa ccgttgcccg ccagcttgtc gcccaccgtg ggctcccagt
     6421 cggtgagccc gaagatctcg tggatcacga tcacggcggg cgccgggtcg cgtcgttcgg
     6481 gataggcgac gtaggcacgg accgagtcgc tcgcccgctt gatccagacc cactcaccgt
     6541 gggtcgttac cggatcgagt cgagggcgct cacggaccaa ccagacaccg aacgcccccg
     6601 ccccggcggc gagtgctgcg acgatgacat aggaagcgag accggcggtg cgacgcatgg
     6661 ggcatgctcc gaaaggctga accaagaacc taggcgagtg ggccgtcgct gtcagcaggg
     6721 agcagggagc agggagcggg gagcagggag ccctcacacc tcctgctccc tgcctcctgc
     6781 tccctacttc ctactcccta cttcctgctt cctgcttcct gcttcctgct tctgaggccg
     6841 aaacccgttt ccgcgccgtc ccgtagcgtg agatgtcacc cgagaaggta gaccatgttg
     6901 ccacctgacc gccgctcctt tctggcccgc ctttccggcg ccctcgccct gctcaccacc
     6961 ggcacgactg acatcgtcgc gtctgagagc aacggcaagc gtccgtccgt ccgtcagccc
     7021 gttcgtccgt ctgagtggga cgacagctgg ctcgagggcc tgaccaccgg acacaaacag
     7081 atcttcgata ttccgggcca cctgaacggc ggggccttgt tctactgcaa caattatctg
     7141 cggggcctcg aagcgagcgg gatccccacc ggcgacatcc aggcggtgct cgggttgcac
     7201 ggcagcgcca taccgctggc cctgaccgat ccgctctggg ccaggtataa gctcggggag
     7261 atgttccgga tcaacgatcc caggaccaag acggcgtcgg ttcggaacct ctggcttgcg
     7321 gcgatcagga agcagggagc agggagcagg aagcagggag cagcaagcag gaagcaggga
     7381 gcaggaagca ggaagcagga atcagaaccg aggtagagcg attgtgtcct gctgcctgct
     7441 ccctgctccc tgctccctgc tccctgcccc tgctcctgaa gttttagtct cgataccgat
     7501 tgcgtccgtc ggctttggcc ttaaggaggt tttgatcggc gagtcgaagt agcgacgtcc
     7561 catctgtgac ccggtcgtca gggtaggtgg ccacaccgat actcacggta atcggcaccg
     7621 gcttctccac ctcgccgaag ggatgactgg cgatccggcg caggatccgg tcggccagca
     7681 gccgggcgcc gccgctgccg gtgagcggca gcagcacgca gaactcttct cccccgaacc
     7741 gcgccaccac gtcgatggcc cgctgctccc gtttgagcag gttggccagc tgggccagga
     7801 ccagatcgcc catctggtgg cccagcgtat cgttggtctg cttgaaattg tccacgtcga
     7861 tcatcaggca gctcagcacg gtggagaacc gctgggcctg ctccagctcc cgggacagcc
     7921 gggactcgag ggcgcgccgg ttgaacagtc cggtgagcgg atcggtctcg gccagctcct
     7981 tcatctggcg ctcgccctcc accgcggcct ggatctggta ggccttctcg atggtggtga
     8041 ccgctgactt gatgacctgg tcggcgaact ggacgtccag ctggttcagc accgcgtcat
     8101 ggccgctggt tcgcaggtag aacacgccta cctgccgccc ctgcaccatg aacgggatcg
     8161 ccagggccga cgtggtctcg accgccttcc cttcctgctg ccactggcgc cgggtctcgg
     8221 cgaacagggg atcggattcg atcgaatcgg agagcaccac ttcgccgctg gtgatggcgc
     8281 gctcgatctc gggatagcgt cgcagctcga cccggagatt ccgcagcatg ggattctcga
     8341 acgccgccac cacggtcgcc acgccctcgt ccggtccccg cagcaggatc gagcagcgcg
     8401 agatgcccag cccctgcgcc acccgccgta ccaggatctg gtagatctcg tccggcgaca
     8461 gcgagctcgc gatctcgcgc aggatctcga tcatctccga ccgcgaccgg gcctcggccc
     8521 gggcccggtt gagctcgcgg ccggcgcgca ggtgggcctt gacccgggcc aggatctccc
     8581 gcacccggaa gggccgcgcc aggaaatcgg tggcgcccag tcccagggct tcgaccgagc
     8641 cttcctcggg cgggagggag gacagcatca gcaccggcag gctctcgaag cgctcgtcgc
     8701 ccttgatccg cgccagcaag cgcatacccg cttcacccga cgcggtctcc agcaccagaa
     8761 ggtcgtgcgg gtcctcggcc atcgtctcga gcaccgcatc ggtggccggc acggccgtca
     8821 ccgcgtagcc gtgctcgtcc aggatccagc ccagggtccg gccgaacgca tgatcgtcat
     8881 gcgcgaacag gatcttggcc ggcgtggtca cgggtcaggc cacgagtttc tgaaacagcg
     8941 cgggatcgac gttgccgccg gtaaggagga tcgcggtggg ggtcttgggt ttgaacttgc
     9001 cggccagcag cgcggccaca ccgaccgcgc ccgaaggctc cacccggaga ccctgttccc
     9061 gccagaggta gcggaccgcg gccccgatct cttcgtcggt gacccggacc gcttcgcgta
     9121 ccacttgccg gatgtactcg aaggtgaggg tgccgaccga aagcggcaga agcccatcgg
     9181 ccaggctggc ggtgctttcc agcgccaccg gatggcccgc ttccagcgcg gccgagagct
     9241 tggccgcccc ttcgggttcc acgcccacca cccgcgcatc gggccgtccg tggatcaccg
     9301 tgacgcaggt gccggccagc agtccgccgc ctccgatagg cgccaggaag gtggaaatct
     9361 ccggatggct ctggagcacc tcgaaggcgc aggtcgattg gcccagcacg atgttgggat
     9421 cgtcgtaggg cgggaccatc gtcaggccct cctccgccgc cacttccgcc gctcgctgca
     9481 gtcgcgcgct ggagatcgcg tcggtgaaga ccacctcgcc gccgtagcgg cgcacgcctt
     9541 ccactttgat cgcgggcgcg gtccggggca tcacgatcac tgcccggagg ccgagcttct
     9601 gcgcggtgaa ggccaccgcc tggccgtgat tgccgctgga gtgggtgatg atgccgcgcg
     9661 ccttggcttc gggcgagagc cgggtgatgg cggtccaggc gccccgcatc ttgaaggcgc
     9721 ccatcggctg ccacaactcg cacttgagaa acaccggctg gctggcccgc cgggacaggt
     9781 cggccgtttc gaccaggggt gtcggcgggg cgacctcccg cagcgcttcc gcggcctgtc
     9841 gtatttcgtc cagcgtgggc accggaggtg cggcagtggt cataggtcct actcggctgt
     9901 ggcggctggc tcgggagcgt cgtcgccggt tggctcttcg ggcccgcctt cgt
//
LOCUS       DASWKS010000393         3077 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3516237, whole genome shotgun sequence.
ACCESSION   DASWKS010000393 DASWKS010000000
VERSION     DASWKS010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3516237"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2162)
                     /locus_tag="VGA78_11155"
     CDS             complement(<1..2162)
                     /locus_tag="VGA78_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894474.1"
                     /translation="MNTHLVNRGIFCAIGLLVLMVPPAVGQAADTTWDVTRPRGQTRP
                     VDFTVSEGTWMSLDVSPDGQWLVFDLLGQVYRLPVTGGQAVPLTAESGIAINIHPRIS
                     PDGKRIAFVSDRKGQNNLWVMDADGRNAKPVLLDPAAQHRTPVWLPDGRFLLFEKVTN
                     LLFRSIQMAHVDGGKGTELVKAEMGTMPSRPSVAADGKSVFYEIFTGRFTGAFGVDDI
                     LKGAYQLRRTDLSTGEAIEITAGQSAQQDRGTSGGAYAPEVSPDGRLLAFMRRMPDAT
                     ITWRGHTYGPRSSLWIRDLESGAERLLMDPVDPDMSEDGIQQHGTYPRYCWMPDGRSL
                     VIAQGGKIRRVDLVSGTVTTIPFTARVQRTVSEQAWGKFRVPDGPVEARFLRWHSAAP
                     DGRTLAFQAFGRIWLMDLPNGTPRRLTPDSFGPLEYSPAWSPDGRVLAFTTWDDSARG
                     AVWRVPAGGGAPQPVSQTAGEYLNPVWSPDGGDLVVVRGGGVTARGMGLARTPFWEVV
                     RVPVAGGGETVLARIRPGPGFAEVVRPAFGPEGRIFFTELKTKQPADPFRPVVLGTLT
                     SVRPDGSDRKVHAEVSYADDVVPSPDGRWLAFSQAGDVFLAPFVMNGTGGAPLTLSKS
                     GGMVPVTRLSKEGGLYPRWRTADLIEFGSGPRFYTHHVGTGRTDTVTVRLSQPRANAR
                     GTIALTGARIITLENKQVIPSGTILIRDGRITCVGACQA"
     gene            complement(2159..2818)
                     /locus_tag="VGA78_11160"
     CDS             complement(2159..2818)
                     /locus_tag="VGA78_11160"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX9894475.1"
                     /translation="MIYDLTPLISPRLAVWPGDTPLSRAVLMDLAGGDSVTLSTLHAT
                     VHLGAHADAPSHYGRGGAAIHQRDLALYLGPCQVLRVAVDRGARVEPEQVGSAITAPR
                     VLLATGTFPDPERWNDDFAALSPRLVDALHEAGVRLVGIDTPSVDLMDSKDLPAHQAC
                     LRHDIAILEGLVLSQVPEGIYELIALPLPLEGFDASPVRAVLRSLPATPPAPSPPRTK
                     S"
BASE COUNT          510 a         1021 c         1029 g          517 t
ORIGIN      
        1 gcctggcagg cgccgacgca ggtgatccgg ccgtcgcgaa tgaggatcgt cccggatggg
       61 atcacctgct tgttctcgag cgtaatgatc cgcgcgccgg tgagcgcgat ggtgcctcgc
      121 gcgttggctc ggggctggct caatcgcacc gtgaccgtgt cggtcctgcc agtgccgaca
      181 tgatgggtgt agaacctcgg gccgctcccg aactcgatca ggtcggccgt acgccatcgg
      241 ggatagagcc caccttcctt cgagagtcgc gtgaccggca ccatgccacc gctcttgctc
      301 agcgtcagcg gcgcgccgcc ggttccgttc atcacgaacg gcgcgaggaa gacatccccg
      361 gcctgggaga acgccagcca gcgcccgtcg ggcgacggca cgacatcatc ggcgtacgac
      421 acttcggcgt ggactttccg gtcgctgccg tccggccgca ccgaggtgag cgtgcctaac
      481 accacgggcc ggaatgggtc ggccggctgc ttggtcttga gctcggtgaa gaagatccga
      541 ccctccgggc cgaaggcggg ccgcactacc tccgcgaacc ccggcccggg gcgaatccgg
      601 gcgagcaccg tttcgcctcc gccggctacc ggcacccgaa cgacctccca gaacggcgtg
      661 cgggcgagtc ccatgcctcg tgccgtgacc ccgccgccgc gaaccaccac cagatcgcca
      721 ccgtcggggc tccaaaccgg attgaggtat tcacctgccg tctggctcac gggttggggg
      781 gctcctcccc cagccgggac ccgccacacg gcgccccgcg cgctgtcgtc ccaggtggtg
      841 aacgcgagca cccgaccatc gggtgaccag gcgggagagt attccagcgg tccgaagctg
      901 tccggcgtga gacggcgggg tgtcccgttg ggcaggtcca tgagccagat ccggccgaac
      961 gcctggaacg ccagggtgcg cccgtcgggc gccgccgagt gccagcggag gaagcgcgct
     1021 tcgaccggtc cgtccggcac ccggaacttg ccccatgcct gctcggacac cgtgcgttgc
     1081 acccgggccg tgaatgggat cgtggtgacc gttccgctta ccaggtcgac ccggcggatc
     1141 ttgccgccct gcgcgatgac gagactccgc ccatcgggca tccagcaata ccggggatag
     1201 gtaccgtgct gctggatccc atcctcggac atgtccggat cgaccggatc catcagcagc
     1261 cgttccgctc cgctctcgag gtctcgaatc cacaaggaag agcgtggccc atacgtatgg
     1321 ccccgccagg tgatcgtggc atcgggcatc cgccgcatga acgccagtaa acggccatcc
     1381 gggcttacct ccggcgcgta cgcgccaccg ctggtgccgc gatcctgctg ggccgactgt
     1441 cccgcggtga tctcgatggc ttcgccggtg ctgaggtcgg tccgccgcag ttgataggca
     1501 cccttgagaa tgtcatcgac cccgaaggct ccggtaaacc ggccggtgaa gatttcatag
     1561 aagaccgatt tgccgtcggc ggctacgctc ggtcggctcg gcatcgtgcc catctcggcc
     1621 ttcaccagct cggtcccctt cccgccgtcc acgtgagcca tctggatgga gcgaaacagc
     1681 aggttggtga ccttctcgaa caggagaaac cttccatccg gcagccacac cggcgtgcga
     1741 tgctgtgccg cgggatcgag cagcaccggt ttcgcattcc gcccgtcggc atccatgacc
     1801 cagaggttgt tctgtccctt tcggtcggag acaaacgcga tccgctttcc atcgggggag
     1861 atacgggggt gaatattgat cgcgatcccg ctttccgccg tgagcggcac cgcctgcccg
     1921 ccggtcaccg ggagccggta gacctgaccc aggagatcga acacgagcca ttggccgtcg
     1981 ggcgacacat cgagggacat ccaggtcccc tcgctcacgg tgaaatccac cgggcgggtt
     2041 tggccccggg gccgggtgac gtcccaggtg gtatcggctg cttggccgac ggcgggggga
     2101 accatcagga ccagcaatcc gatggcgcag aagattccgc gattgaccaa atgagtgttc
     2161 acgacttggt cctcggtgga gatggagctg gtggcgtggc cgggagagac cgcagcacgg
     2221 cccgcaccgg actggcatcg aatccttcca gcgggagcgg cagggcgatc agctcgtaga
     2281 tcccttccgg tacctgggag agaaccaggc cttccaggat cgcgatatcg tggcgcaggc
     2341 aggcctggtg ggctggcaga tccttggaat ccatcaggtc cacgctcggc gtgtcgatgc
     2401 caaccagacg gacgccggct tcgtgcagcg cgtcgaccag acggggagat aaggcggcga
     2461 agtcgtcgtt ccatcgctcc ggatcgggaa aggtgccggt ggccaggagc acccggggcg
     2521 cggtgattgc cgatcccacc tgctccggtt ccactcgggc accgcggtcc accgcgaccc
     2581 gcaacacctg acacgggccc aggtacagtg ccagatcacg ctggtggatg gcggcaccgc
     2641 cgcgaccgta atggctgggc gcatcggcgt gggcaccgag gtgaacggtg gcatgaaggg
     2701 tggagagggt cacgctatcc ccccccgcca ggtccatcag gacggcgcgg gagagggggg
     2761 tgtcgccggg ccatactgcg aggcgggggc tgatgagggg ggtgaggtcg tagatcatgc
     2821 gttcctggtt ccaagttcca acgttccacg tgcggtgctg agtgcggtgc taggtgccct
     2881 gtgcctggtg cgcgacaccc gattctcgct gatactcgcg tcttcctgat gacagtccct
     2941 ggttccctct actgaatatt cgagccatgt caggcgtcca ccggttcgag gacctcagat
     3001 gctggcagga ggcacgggtt ctctccgcag cgatagaacg ctatctgagc tcggcgaacg
     3061 gcatcgatcc gttcctg
//
LOCUS       DASWKS010000394         5673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_942418, whole genome shotgun sequence.
ACCESSION   DASWKS010000394 DASWKS010000000
VERSION     DASWKS010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5673
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942418"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..876
                     /locus_tag="VGA78_11165"
     CDS             109..876
                     /locus_tag="VGA78_11165"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9894476.1"
                     /translation="MKVPISIVVPARDEGERITAFVSAHDWAAEIIVADNGSTDDTAA
                     RASAAGARVIDCGGLTIAGARNAGAEAASQEWIFALDTDEVVTPDLREELPYVLEAPV
                     AAAYEVRRRNLYLGREQRRGRWGRDWVVRMYRKGLRFGETRVHESLVTTEGFGTLAGQ
                     IDHNPYRDLAHHQTKMDRYARWGAEELYQQGRRATVADLTLRPSWRFVKAYLIGGSVL
                     DGRFGLITSLLGAETAFLKYAHLWALERERGEGKGAA"
     gene            1007..2206
                     /locus_tag="VGA78_11170"
     CDS             1007..2206
                     /locus_tag="VGA78_11170"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9894477.1"
                     /translation="MARSFLLTYDFPPMGGGIARWMGELARRFPPDSLVVSTGRMPGS
                     DAVDALLPNPVDRIGVPARRLRTVRGLLFWSRRVTRLARRLQPEFVWCGQMRPAAYPA
                     KWLCERLGIPYGILVHGGDLLSLQHRVHQSRVKRGTARSLLGSASVIVANSRWTGELC
                     QAILGELELDARPGFVRVVSLGTDPAQFRPGVSTEPVRARYGLDGDGRWIMTVARLVP
                     HKGVDVTLHALAGLATEHPTLRYAVVGQGDHLPALQALATDLGLRDRVRFLTDVSDPD
                     LPALYNVADLYVGVSRQAGVDVEGFGISLLEASASGLAVVAGRSGGMPDAVTDGETGV
                     LVDSENPRAVATAIGNLLQDRDRARRLGATGRKAVEDRFTWDRVVTDLQSIAGELSAA
                     PRKALPR"
     gene            complement(2172..3227)
                     /locus_tag="VGA78_11175"
     CDS             complement(2172..3227)
                     /locus_tag="VGA78_11175"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9894478.1"
                     /translation="MAFTLVLSGGGLKGLAHIGVLRALEERGLEPSLVVGVSMGAVIG
                     AAWAAGRRVRELEDRALRLTRRDVFRIAHMDMALRRLGSPAVYRREPLDRLISDLVGT
                     LRFKDLPRRLLINTVDINTGHQILWGLPGLDDALVADAAFASCALPGILPPREVNGYF
                     CADGAIVDNLPVRAAAAVGTGPVIAVDVGSIGIERTGLERLGFAMTYGRGIEIVMGRL
                     AELTLDDWDSPALVLIRPRVSKISMFAFNRTPVLISEGYRSTLEALDLLPDGIDSLPP
                     GGIHPLRHVEVKVDSPRCVGCGLCVAMNPRAFMMDARGRAVVRREHQTWTPVGDAAVR
                     ACPTGAISVVELSGEPR"
     gene            3261..4163
                     /locus_tag="VGA78_11180"
     CDS             3261..4163
                     /locus_tag="VGA78_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894479.1"
                     /translation="MRSFAPDDRPVLNRQSSIANRQWLLAARLRQDRLFQLGVVLVLL
                     VVIAALLAPLLAPHDPLRGDLRGAYLRPPGGSFLLGTDTQGRDVLSRVLYGARISLVV
                     GLVSQSIAALLGVTLGLVSGYYGRWVDTLVMRLADVTLAFPTLLLLIAIAAAVNPSVF
                     VIFLVIGAVGWAAMARLVRSQVLVLRSADYVTAARALGAPDRRLLFRHLLPNVRAQVI
                     VAATLGAAGAMMAEAALSFVGLGVRPPTPSWGGMVADGRDLLRVAPWVSVVPGVALGM
                     TVLGFNLVGEALRELYDPKLRRTD"
     gene            complement(4199..5506)
                     /gene="tyrS"
                     /locus_tag="VGA78_11185"
     CDS             complement(4199..5506)
                     /gene="tyrS"
                     /locus_tag="VGA78_11185"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX9894480.1"
                     /translation="MPDLLTELSSRGLVHDQTPGLAQRLRRGPVTGYVGFDPTANSLH
                     VGNLVPVMALAWLQRHGGRPLVVVGAGTGMVGDPSGKRAERPMLSLQEIDANAEAIRG
                     QLARFLDFEGPRAARMFNNADWLRGLTLLEFLRDTGKHFTIGYMLQKEAVKARLETGI
                     SFTEFAYMLVQAYDYDHLYHTAQCELQMGGTDQWGNITAGIELVGKKRGAQVQGLTLP
                     LLTTAAGTKFGKSEGENVWLDPARTSPYKFYQFWINQDDRDVGRLLRTFSFRPLSEIA
                     DLLAAHALAPERRGAQRELAEELTLRIHGEEESGKAREAAAALFGRTDGQTDGRAGGR
                     ADGRTGGRTDALLTAEMPEVVIPASQFGEGMPMAEVLVRVGLASSKADARRGLEGRGF
                     YLDEEQLSDPAARLEQTDLLEANGQRVAILRKGKRNYVRLVVR"
BASE COUNT          853 a         1932 c         1904 g          984 t
ORIGIN      
        1 tccgccgctc cgcgccgcgc tgggacgaga agcccgccgt cgcattctgg cggaattccc
       61 gctggaacgc atggagcgcg actacgtgac gctgttcgag gaatggggat gaaagttccg
      121 atatcgatcg tggttccggc ccgcgacgaa ggcgagcgca tcaccgcgtt cgtctcggcg
      181 cacgactggg ccgccgagat catcgtcgcc gacaacgggt cgaccgacga caccgcggca
      241 agagcgtcgg cggctggcgc acgggtcatc gactgcggcg gcctgaccat cgccggggcg
      301 cgcaatgccg gcgccgaagc cgcgagccag gagtggattt tcgccctcga caccgacgag
      361 gtcgtgactc ccgatctgcg ggaggagctg ccgtacgtat tggaagcccc cgtggccgcg
      421 gcgtatgagg tcagacgccg caatctctac ctcgggcggg agcagcgccg gggccgctgg
      481 ggccgggatt gggtggtgcg gatgtaccgg aagggtctgc gcttcgggga aacccgggtg
      541 catgagtccc tcgtaaccac cgaaggcttt ggcacccttg cgggccagat cgatcacaat
      601 ccctatcggg acctggcgca tcaccagacc aagatggacc gctacgcccg ctggggggcg
      661 gaggagctgt accagcaagg tcgccgtgcc accgtcgccg atctgaccct ccggccgtcc
      721 tggcggttcg taaaggccta cctgataggc ggttcggttc tggatggccg cttcggactg
      781 atcacatcgc tgctcggcgc ggagaccgcg tttctcaagt atgcgcatct ctgggcgctc
      841 gaacgggaga ggggggaggg gaagggggcg gcgtaatgca gagtgcccaa tgccgaatgc
      901 ccaatagaga ggtggggcag aggctgatcc ctctgcattg ggcactgggc actgggcatt
      961 ctgcattccc tcccccctct tccctccccc ctctaccttt aatgaagtgg caagatcatt
     1021 tctgctgacc tacgacttcc ctcccatggg cggcggcatc gcccgctgga tgggggagtt
     1081 ggcccggcgt ttccctcccg actccctggt ggtctccacc ggccggatgc ccggctcgga
     1141 cgccgtggat gctttgttgc ccaacccggt ggaccggatc ggggttccgg ctcgtcggct
     1201 ccgcaccgtg cggggcctct tgttctggtc tcgccgggtg acccggctcg cccggcggct
     1261 ccagcccgag ttcgtgtggt gcggtcagat gcggccggcg gcatatcccg ccaaatggct
     1321 ctgcgagcgg ctgggcatcc cctacgggat tctggtgcat ggcggcgatc tgctcagcct
     1381 ccagcatcgg gtccaccaat cccgggtcaa gcgcggcacc gcgcgctccc tgctcggatc
     1441 agcgtcggtc atcgtggcca acagccggtg gaccggcgag ctgtgccagg ccattctggg
     1501 cgagctggag ctcgatgccc ggcccggatt cgtgcgggtg gtgtcgctgg ggaccgaccc
     1561 ggcccagttc cggcccggcg tgtcgaccga accggtccgg gcccgctacg ggctggacgg
     1621 ggacggtcgc tggatcatga ccgtggcccg cctggtgccg cacaagggcg tcgacgtcac
     1681 gctgcacgcc ctcgccggac tggcgacgga acatccgacg ctgcggtatg ccgtggtggg
     1741 gcagggggac catcttccgg cgcttcaggc cctggccacc gatctgggcc tgcgagaccg
     1801 ggtgcgcttt ctcaccgacg tgagcgaccc ggatctcccg gcgctataca acgtggccga
     1861 tctctatgtc ggcgtttcgc gccaggccgg ggtggatgtg gaaggcttcg ggatttcact
     1921 gctggaggcc tccgcgtcag ggttggcggt cgtcgccggc cggagcggcg ggatgccgga
     1981 tgcggtgacg gacggtgaaa ccggcgtcct ggtggactcc gagaatcccc gggccgtcgc
     2041 caccgccatc gggaacctgc tgcaggatcg ggatcgggcc cggcgattgg gtgccaccgg
     2101 acggaaggcg gtggaagacc gcttcacctg ggaccgggtg gtgaccgacc tgcagtccat
     2161 cgcaggagag ctcagcgcgg ctccccggaa agctctacca cgctgatcgc gccggtcggg
     2221 caggcgcgca ccgccgcgtc gcccaccgga gtccaggtct ggtgttcgcg gcgcaccacc
     2281 gcccggcccc gtgcatccat catgaaggcg cgcgggttca tcgcgacgca gagaccgcac
     2341 cccacgcagc gcgggctgtc caccttcacc tcgacgtgcc gcagcgggtg aattccgccc
     2401 ggcggcaggc tgtcgatgcc gtccggcagc agatccagtg cctccagcgt cgaccggtag
     2461 ccctccgaga tcagcaccgg tgtgcggttg aacgcaaaca tcgagatctt gctcaccctg
     2521 ggacgaatca gcaccagggc cgggctgtcc cagtcgtcga gcgtcagctc cgccagccgg
     2581 cccatcacga tctcgatgcc acggccgtag gtcatcgcga accccagccg ctccagtcca
     2641 gtgcgctcga tcccgatcga tccgacatcg accgcgatta ccggtcccgt gcccaccgcg
     2701 gcggcggcgc gcaccggcag gttgtcgacg atggcgccat cggcgcagaa gtacccgttc
     2761 acctcccggg ggggcaggat cccaggcagg gcacacgacg cgaaggctgc gtcggccacc
     2821 agggcgtcgt ccaggccggg cagcccccac aggatctggt ggccggtgtt gatgtcgacc
     2881 gtgttgatga ggagccgccg aggcaggtcc ttgaagcgca gggtaccgac caggtcggag
     2941 ataagtcggt cgagcggctc gcgccgatac accgcgggcg atcccagacg tcgcagggcc
     3001 atgtccatgt gcgcgatccg gaatacatcc cggcgggtaa gccggagcgc cctgtcttcc
     3061 agctcgcgga cccgccgccc cgctgcccag gccgcgccga tgacagcgcc catggagacg
     3121 cccaccacca gtgacggctc cagccctcgc tcttccaggg cccggagcac cccgatatgg
     3181 gccaggccct tgaggccacc gccgctcagg acgagggtaa aggccattga cgattgacga
     3241 ttggcgattg acgattgttc atgcgcagct tcgctcctga tgacaggccg gttctcaatc
     3301 gtcaatcgtc aatcgccaat cgtcaatggc tactggccgc ccgtctgcgt caagaccggc
     3361 tgtttcagct gggagtggtg ctggtgctgc tggtggtcat cgcggcgctc ctcgcgccgc
     3421 tgcttgcccc ccacgacccg ctccggggtg acctgcgggg tgcctacctc cgcccgcccg
     3481 gaggcagctt cctgctgggg accgataccc agggccggga cgtgctcagc cgggtgctct
     3541 atggagcccg gatttccctc gtcgtgggcc tggtctccca gagcattgcc gcgctgctcg
     3601 gcgtgaccct gggactggtc tcggggtact acggccgctg ggtcgacacg ctggtgatgc
     3661 gcctggccga cgtgacgctg gcgtttccca cgctcctcct gctgatcgcg atcgcagccg
     3721 cggtcaaccc ctcggtcttc gtcatcttcc tggtcatcgg cgccgtgggg tgggccgcga
     3781 tggcccgtct ggtgcggagc caggtgctgg ttctgcggag cgcggactac gtcaccgccg
     3841 cccgcgcgct gggcgcgccc gatcggcggc ttctgtttcg ccatctgttg cccaacgtcc
     3901 gagcccaggt catcgtcgcc gcgaccctcg gtgccgccgg tgcgatgatg gccgaggccg
     3961 cgttgtcttt cgtggggttg ggggtgagac cgccaacccc gagctggggg ggcatggtgg
     4021 cggacgggag ggatctgttg cgggtggcgc cctgggtctc ggtggtgccg ggtgtggccc
     4081 tgggaatgac ggtgctgggg ttcaacctgg taggagaggc gctgcgcgag ctgtacgatc
     4141 ccaaactgag gcggacggac tgacggacaa acggcctgac ggacggcctg acggcagctt
     4201 acctcaccac tagccgaacg tagttccgct ttccctttcg aagaatcgct acccgttggc
     4261 cgttcgcctc cagcagatcg gtttgctcca aacgagcggc tgggtcgctg agctgctcct
     4321 cgtccagata gaagccgcgc ccttcgagac cccgccgagc atccgccttg gaactcgcca
     4381 gcccgacgcg aaccagcacc tccgccatcg gcatgccttc cccaaattgc gaggcgggaa
     4441 tgacgacctc cggcatctcg gcagtgagca gggcgtctgt ccgtccgccc gtccgtccgt
     4501 ccgcccgtcc gccggcccgt ccgtccgtct gtccgtccgt ccgtccgaac agcgccgccg
     4561 cggcttcccg cgccttaccc gactcttcct cgccgtggat ccgcagcgtc aactcctcgg
     4621 ccagctcccg ctgggccccg cgccgctctg gcgccagggc gtgggccgcc agaaggtccg
     4681 cgatctcgga caacggccgg aagctgaagg tccgaagcag ccgccctacg tcccgatcgt
     4741 cctggttgat ccagaactgg tagaacttgt agggagaggt ccgggccggg tcgagccaga
     4801 cgttctcgcc ttcgcttttc ccgaacttgg tccccgcggc ggtggtgagc agcggcaggg
     4861 tgagcccctg gacctgggcc ccgcgcttct tcccgaccag ctcgatcccc gcggtgatgt
     4921 tgccccactg gtcggtgccg cccatctgta attcgcactg ggcggtgtga tacaaatggt
     4981 cgtagtcgta ggcctggacc agcatgtaag cgaattccgt gaaggagatc ccggtctcca
     5041 accgggcctt caccgcttct ttttgcagca tgtagccgat cgtgaagtgc ttgccggtgt
     5101 cgcgcaggaa ttccagcagg gtgagacctc ggagccagtc cgcgttgttg aacatccggg
     5161 cggcgcgggg gccttcaaag tcgagaaagc gagccagttg gccccggatc gcctccgcat
     5221 tcgcgtcaat ctcctgcaag gacagcatgg gccgctcggc ccgtttgccg ctgggatcgc
     5281 ccaccatgcc ggtgccagct cccacaacca ccagaggtct gcccccatgc cgctgcagcc
     5341 atgcgagcgc catcacgggg accagattgc caacatggag cgaattcgcc gtggggtcga
     5401 accccacgta gccggtgact ggacccctcc gcagccgctg ggccagaccg ggtgtctggt
     5461 cgtgaaccag gccgcgcgaa ctgagttctg tcagcaaatc aggcatggga caagaataat
     5521 cggacggcta aggcggttac ggcggtcaag ccggttacgt aaccgcctta cccgccctac
     5581 ccgcccgttt attcttagtg catgaggttt ccccgcatca ccccgctaat ccggaagcgg
     5641 atgctcatcg gtctggccgc cgctgtcgta ttc
//
LOCUS       DASWKS010000395         8570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2069746, whole genome shotgun sequence.
ACCESSION   DASWKS010000395 DASWKS010000000
VERSION     DASWKS010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069746"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1933
                     /locus_tag="VGA78_11190"
     CDS             134..1933
                     /locus_tag="VGA78_11190"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9894481.1"
                     /translation="MPDATPSRSPARPEPGPGVTDLELVDRVGAALGTRYRIMRVVAR
                     SPERVLFEATDTLLKRHISIRINIWSGEQARNWFLLEAEALAQLDHPAIRHVYDVGTA
                     GDIAWRIGNWVDGEGLHEAVRRGPRPIPSVHVMARALLSALEHAHSRGIIVRRILPSS
                     LIVGPSGRGTLTDLRHCSYALPHIPAHERSSGQAFMAPEVREGQPGDPASDVYTTAAN
                     IYFAITGQEPPVDPRQLEPPTRLRPAAPQVFDRLLARAMQPDPWSRYITAWEMYEDFA
                     SEAGEVAGQATYIGSPKPESLLETAEHWEKRLRRALGDDYELLTEIGRGGFGRVYRVR
                     DLHLERVVALKVLEPVLTLDPAAVERFRREAQLAARLRHPNVVDIFEIGGRYGLIWYT
                     MELVEGPNLAQLVEREGPQSREKVLRLLREGLAALAEAHAAGLVHRDIKPENMLLEPG
                     GALKITDFGLALALRGSGRFGGATSQSGTPQFASPEQLLGEKVDQRTDLYSLSAVAYY
                     ALLGRPPFTGRHVTEILAKQTTDAIPNLLAEKPEVGAELARVLERAVRADPEQRYASA
                     SEFYQALTYAAALPTEEPTFWTEAANRFLRRNT"
     gene            2151..2363
                     /locus_tag="VGA78_11195"
     CDS             2151..2363
                     /locus_tag="VGA78_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004094893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX9894482.1"
                     /translation="MSRTLGTVKWFNDAKGFGFITPETGEKDCFVHHSAIKMDGFRSL
                     AEGDRVEFDLVQGQKGPAAENVTKVK"
     gene            complement(2371..2589)
                     /gene="infA"
                     /locus_tag="VGA78_11200"
     CDS             complement(2371..2589)
                     /gene="infA"
                     /locus_tag="VGA78_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX9894483.1"
                     /translation="MAKEEGIEMEGVVQEVLPDRNYRILLENGHTILAYAAGKMSKFK
                     IRVLEGDRVTVVLSPYDLTRGRVVYRHK"
     gene            complement(2721..4460)
                     /locus_tag="VGA78_11205"
     CDS             complement(2721..4460)
                     /locus_tag="VGA78_11205"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEX9894484.1"
                     /translation="MTVHRVEYVVPLPASPAELADATWKSIFPLYEAVAGVPLDRFSI
                     RDWLATWSRLEELVSEAASLSMIAYTCDTADPAKEAAYLRFSAEIMPLAEEQGVRLAR
                     LLVDSGLAPDRLETVVERFRTSILLFRDANVPLFAELEGLSAQYQKITGGMTAEWEGE
                     RKPLPQLSPFLQHPDRTIRERAFRSSVEPYVTAHDELASLFDELYGRRQQVALNAGFA
                     DFRDYVFPAKFRFDYTPDDCRRFHEAVEATVVPALTRAMTERQRRLRLPGLRPWDLAV
                     NPYRRETLRPYSEPAELPRTAQRIFDRLDPHLGAEFQRMIDEHLLDLESRAGKAPGGY
                     CDTLHARGRPFIFMNASGILEDVTTLLHEAGHAFHAFASHQQPFIWQRHPGSEAAELA
                     SMSMELLAGRWLSRPVGYLGETDARRAQLEHLEDVLSSLAHIASVDAFQHWLYSSGAG
                     HDPTARDAEWLRIRSRFEPMVDWSDLERERIARWYRQLHIFLYPFYYIEYGIAQLGAL
                     QVWRNSLSDPEGAVSAYRRFLQLGATRPLPALYAEAGAQLVFDPARMGELVRLVETRA
                     AQLRGEIDAGSQD"
     gene            complement(4457..5704)
                     /locus_tag="VGA78_11210"
     CDS             complement(4457..5704)
                     /locus_tag="VGA78_11210"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9894485.1"
                     /translation="MSRARPSPQVEFRELWVLVTASGVDMVGFAMVLPLMPFYALRLN
                     ATPEQIGLLVASYSIAQLLFAPVWGRVSDRYGRRPAMLIGLTAATVAYVVFAFADSLW
                     LLFASRIIQGAGGGTTGVAHAYVADTIKPGDRARALGWLSAASSAGVMLGPVVGSFST
                     HWGWAAPGLIAASLCLINVIFAWRWLHESRKPGAHQPHAERKPIWHAAWTVVRHPQRP
                     VSRFVCIYGAGMLGFSAMNAVLALYLNFRFDVDERSIGYVFLYVGALSLVMRTLILGP
                     AIDRLGEPGVMRLGTIALLLGLVLYPLPGKLWLLALIIPLVPIGTALLFPATTSLMSR
                     VSAKDELGLTMGVAQTFAGIARVIAPLVATSAYQRFGPPTPFYIAGGIVALVGVLAFR
                     VVAPTVAQPTPAEGMAPSGSGAA"
     gene            complement(5701..8085)
                     /locus_tag="VGA78_11215"
     CDS             complement(5701..8085)
                     /locus_tag="VGA78_11215"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HEX9894486.1"
                     /translation="MIAAHPDDEDTELLTVLGRGMGAEIAYLSLTRGEGGQNLIGDEL
                     GPALGVLRTGELLAARGLDGGRQYFTRAYDFGFSKSLADTWRFWPQDSVLKDVVRIVR
                     RFQPQVIVTIFSGTPRDGHGQHQAAGWAAREAFRAAADSSRFPELKQEEGLGPWQPLK
                     LYQSARFGGDEPNLLLEGGVLDRAVGQSYLQIAMRGRSLHRSQDMGVAQRIGPSPIRL
                     RLIEDRTGAGSSGFFAGVDTSLAAGLGLASAADRATADSVAAALRRLTALNPGGLAAL
                     RRRLAALLGPESAWSPAARDQMQRLDDAAYVASGVLCDATSPSDRIVAGGHATVVLSC
                     WNSSPDTVEVGWRLELVGSDGPRGAIRRLGPGELATDTMSVAVAAGFPPTEPYFLRSP
                     LRGALYPWPPGEHWLWGLPFEPAPLMAEFVLDGGSLRREVQYRFVDQALGEVRRPVFV
                     VPRIDVAIEPASGLWPRGVATARQFTVRLRHFASDTTEGTVTLDVPEGWIAAGAQPFH
                     LAGTTDQNALRFRISPGAAPATGPFRVVARDAAGRVHATGITRVDYPHVRARQVARLA
                     EARIVVATLKLPLGARLGYVRGAADRIPEALSTLGLDLVLLTRDSLARGDLSRYRSIT
                     IGPRAYETEPALELYNGRLLEYVRNGGTLVVQYQQLLYFRGGYAPYPLALTERLGQVP
                     ARVSAARVAEEDAKVTVLQPTHPAMTEPNRLTDADWSGWVQERGLYFPRSWSGEWTPL
                     LEMADAGEPPQRGALLIARYGKGVYVYAGVSFFRQLPAAVPGAARLFLNLMALR"
     gene            complement(8238..>8570)
                     /locus_tag="VGA78_11220"
     CDS             complement(8238..>8570)
                     /locus_tag="VGA78_11220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894487.1"
                     /translation="PRPFAGWWADAQPRAGMIAGRRFWIFIWFGILLLGITGLGGAIF
                     WGRQTHWKNLDEIFRGIGTITVSVGMLMLLYGVMIGAAQLLLALAVTCFILAFIFGRR
                     NERPRSDS"
BASE COUNT         1558 a         2946 c         2814 g         1252 t
ORIGIN      
        1 gagcagttca actccaccca tcctgaattc ggactctcta ccgtcagcat cgggctggcc
       61 gaatctcccc gagacggcga cagcgtgccc gcgctgctcg ccgcggccga cgccgccctg
      121 taccgtgcca agcatgccgg acgcaacgcc gtccaggtcg ccggcgcgtc ctgagcccgg
      181 ccccggcgtc accgacctgg agctggtcga ccgggtcggg gccgcgctcg gcacgcgcta
      241 ccggatcatg cgggtggtgg cgcgctcacc cgagcgcgtc ctgttcgagg ccaccgacac
      301 actgctcaaa cgccatatca gtatccggat caacatctgg tccggggaac aggcccgaaa
      361 ctggttcctg ttggaggccg aggccctggc ccaactggac caccccgcca tccggcacgt
      421 ctacgatgtc ggaaccgccg gcgacatcgc ctggcgcatc ggcaactggg ttgatgggga
      481 aggccttcat gaggcggtac ggcggggacc gcgtccaata ccgtcggtcc acgtcatggc
      541 ccgggcgctg ctgagcgcgc tggagcacgc ccactcccga ggcattatcg tacgccggat
      601 tctgccgtca tccttgatcg tgggaccgag cggacgcgga accctgaccg atctgcggca
      661 ctgcagttac gcccttcccc acattccggc ccacgaacgc agctcgggac aggccttcat
      721 ggcacccgaa gtccgggagg gtcagccggg cgatcccgcc agcgacgtct acaccacggc
      781 ggccaacatc tacttcgcca tcaccggcca ggaaccgccg gtcgatccgc ggcagctgga
      841 gccaccgacc cggctccggc cagccgcccc ccaggtcttc gaccggctgc tggcgcgggc
      901 catgcagccc gatccctggt cccgttacat caccgcctgg gagatgtacg aggatttcgc
      961 gtcagaggcc ggtgaggtcg cgggtcaagc cacctacatc ggcagcccca aaccggaaag
     1021 cctcctggag accgccgaac actgggagaa gcgacttcgc cgggctctgg gcgacgacta
     1081 cgagctgctg accgagatcg gccggggtgg cttcggacgg gtgtaccggg tacgggatct
     1141 ccacctcgag cgggttgtcg ccctgaaggt gctggaaccg gtgctcaccc tggaccccgc
     1201 agcggtggag cgcttccggc gtgaggccca gctggccgcg cgactgcgcc atcccaatgt
     1261 cgtggacatc ttcgagatcg gcggccgcta cgggctgatc tggtatacca tggagctggt
     1321 cgaaggtccc aacctggccc agctggtgga gcgcgaaggg ccccagtcgc gggagaaggt
     1381 actccgactg ctgcgtgagg gattggcggc gctcgccgag gctcacgccg ccggtctggt
     1441 ccaccgcgac atcaaacccg aaaacatgct gctcgagccc ggcggtgcac tcaagatcac
     1501 ggacttcggt ctggcgctgg ccttgagggg gtcgggccga ttcggcgggg ccaccagtca
     1561 aagcgggacg ccccagttcg ccagcccgga acagctgctg ggcgagaagg tagaccagcg
     1621 caccgacctc tacagtctgt cagcggtggc ctattacgca ctcctgggac gcccaccctt
     1681 caccggccgt cacgtcaccg agatcctggc caaacagacc accgacgcca tccccaacct
     1741 cctggccgag aagcccgagg tcggagccga actggcgcgg gtgctggaac gcgccgttcg
     1801 ggccgatccc gagcagcgct acgccagcgc cagcgagttc taccaggccc tcacatacgc
     1861 tgccgccctt cccaccgagg aaccgacctt ttggacggag gcggcgaacc ggttcctgcg
     1921 ccgcaacacc taggaggcaa ttcgcttgac gaaatcgtga cacatgctca tatttgcagc
     1981 gtttgttctc cgtaattcat gctgacacag actaccccct acaacgtatt ccacggcgaa
     2041 ccggccgcgg attttccgtt tatgacgcgg gaactggccc gcgcccataa tgccgctggc
     2101 acgactgtgt cactgcggcg gaggcacctc taacaggagt ccgctggact atgtctcgca
     2161 cgctcggcac cgtgaagtgg ttcaacgacg cgaaggggtt cggcttcatc accccggaga
     2221 ccggagagaa agactgcttc gtccatcact cggccatcaa aatggacggc ttccgcagtc
     2281 tggcagaggg tgatcgggtc gagttcgacc tggtgcaggg gcagaaggga cctgccgcgg
     2341 agaatgtcac gaaggtgaag tagtcgctgg ctacttgtgc cggtagacca cccgaccgcg
     2401 ggtgagatcg tagggcgaca gcaccacggt cacccgatca ccctccaaca cccggatctt
     2461 gaatttgctc atctttccag ccgcataggc caggatggtg tggccatttt cgagcaggat
     2521 gcgataattc cggtccggca gcacctcctg cacgacccct tccatctcaa tgccttcttc
     2581 cttggccatc cagtcctcgg tgtggtcagt ggtcaggagc gggcaattat cgcgcttcgc
     2641 cgccgaaact acaaggactg ggactcagga ctaagtcctt agtcccaagt ccttagtccc
     2701 aagtccttag tcctgcgtcc ttagtcctgg gaaccagcat cgatctcacc tctgagctgg
     2761 gcggcccttg tttccaccag ccttaccagc tcccccatac gggcgggatc gaacacgagc
     2821 tgggcgccgg cttcggcgta cagcgccggc aggggtcggg tggcgccgag ctgcaggaag
     2881 cgccgatagg cgctgacggc cccctcgggg tcggacaggc tgttgcgcca gacctgaagg
     2941 gcacccagct gagcgatgcc gtattcgatg tagtagaacg gatagagaaa gatgtgcagc
     3001 tggcgatacc agcgggcgat gcgctcccgc tccagatcgg accagtccac catcggttcg
     3061 aaccggctgc ggatccggag ccactcggca tcgcgcgctg tcgggtcatg accggccccg
     3121 ctgctgtaca accagtgctg gaacgcatcc accgaggcga tgtgggccag gctgctcagc
     3181 acgtcttcca ggtgttccag ctgggcgcgg cgggcgtcgg tttcgccaag gtagccgacc
     3241 ggccgtgaca gccaccgccc ggccagcaat tccatggaca tcgaagccag ctccgcggcc
     3301 tcggagcccg ggtgccgctg ccagatgaag ggctgttggt gcgaggcgaa tgcatgaaag
     3361 gcgtgcccgg cttcatgcag cagcgtggtg acgtcttcca ggatccccga ggcgttcatg
     3421 aagatgaacg gccgtccccg cgcgtgcagc gtgtcgcagt aaccccctgg cgccttcccc
     3481 gcgcgtgact ccagatcgag caagtgctca tcgatcatcc gctggaattc ggcccccagg
     3541 tgcggatcga gccggtcgaa gatccgctgg gccgtgcggg ggagctcggc cggctcggaa
     3601 tagggccgca gggtctcccg gcggtaggga ttcaccgcca gatcccaggg acgcaggccc
     3661 ggaagccgca gccgccgctg ccgctcggtc atcgcgcggg tcagagccgg gacgaccgtg
     3721 gcctcgaccg cctcatggaa gcggcggcaa tcgtccgggg tgtaatcgaa gcggaacttg
     3781 gcggggaaaa cgtaatctct gaaatcggcg aaccccgcgt tcagggctac ctgctgccgc
     3841 cgaccgtaca gctcgtcgaa cagactggcc agctcatcgt gggcggtcac gtacggctcg
     3901 accgaggagc gaaaggcgcg ctcccggatg gtccgatcgg ggtgctgcag aaacggtgag
     3961 agctggggca acggcttgcg ctcgccttcc cattcggccg tcatgccgcc ggtgatcttc
     4021 tggtactgcg ccgacagacc ttccagctcc gcgaaaagcg gcacattggc gtcccggaac
     4081 agcaggatcg aagtgcggaa ccgctcgacg accgtttcga gccggtctgg ggccagaccg
     4141 gaatccacca gcagccgcgc cagccgcact ccctgttctt ccgccagggg catgatctcg
     4201 gccgaaaacc ggagataggc ggcttccttg gccgggtcgg ccgtgtcgca ggtgtaggcg
     4261 atcatcgaga gagacgcggc ttcggaaacc agctcttcca gccgggacca ggtggcgagc
     4321 cagtcacgga tggagaagcg gtcgagcgga acgccggcga cggcttcata cagcgggaag
     4381 atcgacttcc aggtggcgtc agccagctcc gccggcgatg ccgggagcgg cacgacgtat
     4441 tccacgcggt gcacggtcat gccgcgccgc taccggacgg ggccatacct tcggccgggg
     4501 tcggctgcgc aaccgtggga gccacgaccc ggaaggccag caccccgacc agcgccacga
     4561 ttccccctgc gatatagaac ggggtgggag gcccgaagcg ctggtaggcc gacgtcgcca
     4621 ccaacggcgc gatcacccgg gcgatcccgg cgaaggtctg cgccaccccc atggtgagcc
     4681 cgagctcatc cttcgccgac acccgcgaca tcagggaggt ggtcgcggga aagagcagcg
     4741 ccgtgccgat cggaaccagc ggaatgatca gcgccagcag ccatagcttc cccggcagcg
     4801 gatagaggac cagtcccagc agcagcgcga tcgtcccgag ccgcatgacc cccggctccc
     4861 ccagccggtc gatggccggc cccagaatca gggtccgcat gaccagcgac agcgctccga
     4921 cgtacagaaa gacgtatccg atgctcctct catccacgtc gaaacggaag ttgaggtaca
     4981 gggccagcac cgcattcatg gccgagaagc ctagcatccc cgcaccgtag atgcagacga
     5041 agcgggacac gggccgctgg ggatgtcgca ccacggtcca ggcggcgtgc cagatgggct
     5101 tccgctccgc gtggggctgg tgggcaccgg gctttcgcga ttcgtgcagc cagcgccagg
     5161 caaagatcac gttgatgaga cagagcgagg cggcgatcag tcccggtgcc gcccaacccc
     5221 agtgggtcga gaaggatccg acgaccggtc ccagcataac cccggccgag ctcgcggccg
     5281 agagccaccc cagggcgcgg gcccggtcgc ccggtttgat ggtgtcggcc acgtaggcgt
     5341 gcgccacgcc ggtcgtgccg ccgccggcac cctgaatgat ccgcgacgcg aacagcagcc
     5401 agagcgagtc ggcgaaggcg aacacgacgt atgcgacggt ggccgccgtc agcccgatga
     5461 gcatggccgg tcgccgcccg taccggtcag acacccggcc ccacaccggc gcgaacagca
     5521 attgcgcgat ggagtacgac gcgaccagca gcccgatctg ctccggcgtg gcgttgagcc
     5581 gcaaggcata gaacggcatc agcggcagca ccatcgcgaa gccgaccatg tcgaccccgc
     5641 tggccgtgac caacacccac agctcgcgaa actccacctg cggcgacggt cgggctcggc
     5701 tcaccgcagg gccatcaggt tcagaaagag gcgtgcggcg cccggcaccg ccgccggcag
     5761 ctgccggaag aagctcacgc cggcatacac gtaaactccc ttgccatagc gggcgatcag
     5821 cagggcgccg cgctgaggag gctcaccggc atccgccatc tcaagcagcg gggtccactc
     5881 cccgctccag gaccgcggga aatacaaacc gcgctcctgc acccacccgg accagtcggc
     5941 gtcggtaagc cggttgggct ccgtcatggc gggatgggtc ggctgcagca cggtcacctt
     6001 cgcgtcttct tccgcgaccc gggccgccga tacgcgggcg ggtacctgac ccagccgctc
     6061 ggtcagggcg agcgggtacg gcgcgtagcc gccccggaag tacagcagct gctggtactg
     6121 caccaccagt gtaccgccat tgcgcacata ctcgagcagc cggccgttgt agagctccag
     6181 cgcgggctcg gtctcgtagg cccgggggcc gatcgtgatg ctgcgatagc gggacaggtc
     6241 gccccgggcg aggctgtccc gggtgagcag gaccagatcg agacccaggg tggaaagcgc
     6301 ttcgggaatc cggtccgccg ccccgcgcac atacccgagc ctggcgccaa gcgggagctt
     6361 gagagtcgcc acgacgatcc gcgcttcggc gagacgagct acctgtcgtg cccgcacgtg
     6421 gggatagtct acccgggtga ttccggtcgc atggacccga cccgccgcgt cacgggcaac
     6481 gacccggaaa ggcccggtag ccggggcggc gcccggcgag attctgaagc ggagggcgtt
     6541 ctgatcggtg gtacccgcca gatgaaacgg ctgagccccg gcggcgatcc agccctccgg
     6601 gacgtccagc gtgacagtgc cctcggtggt gtccgaggca aagtggcgca gccggaccgt
     6661 gaactggcgc gccgtcgcaa cgccgcgagg ccagagtccc gatgccggct cgatcgccac
     6721 atcgatccgc ggcaccacga acaccggccg acggacctcg cccagtgcct gatccacgaa
     6781 gcggtactga acttcccgcc gcagggaacc gccgtccagc acgaactccg ccatcaaagg
     6841 cgcgggctcg aagggcagcc cccagagcca gtgctcgccg gggggccacg ggtacagtgc
     6901 gccgcggagc ggcgaacgca ggaaataggg ctcggtgggc gggaagccgg ccgccaccgc
     6961 taccgacatg gtgtcggtgg cgagctcacc ggggccgagc cgccggatgg cgccccgcgg
     7021 cccatcgctg ccgaccaact cgagccgcca tcccacctcc acggtgtcgg gtgaggagtt
     7081 ccagcaggag agcactaccg tcgcatgtcc gccagcgacg atccggtccg acggcgaggt
     7141 cgcgtcgcac aggaccccgc tcgcaacgta cgccgcatcg tccaaccgct gcatctggtc
     7201 ccgcgcggct ggagaccagg cgctctcggg tccgagcagt gccgccagtc gtcgccggag
     7261 cgctgccagt ccaccgggat tgagcgcggt cagacgccgg agtgcggcgg cgaccgaatc
     7321 agcagtggcc cgatccgccg ctgatgccag acccagtccg gcggccagcg acgtatcgac
     7381 gccggcgaaa aagccgctcg agcccgcccc ggttcgatct tcgatcagcc ggagccggat
     7441 cggggagggt ccgatccgct gggcgactcc catgtcctgc gaacggtgca ggctccggcc
     7501 tcgcatggcg atctggagat acgactgacc cacggcgcgg tccagcacgc cgccttcgag
     7561 gagaaggttc ggctcgtcgc cgccgaagcg cgcactctgg taaagcttga ggggttgcca
     7621 cggccccagg ccttcctcct gcttcagctc gggaaatcgg ctggaatcag ccgcggcccg
     7681 gaaggcctcg cgcgccgccc acccggctgc ctggtgctgg ccatgaccgt cgcggggggt
     7741 cccggagaag atcgtgacga tcacctgggg ctggaagcgc cggacgatcc ggaccacgtc
     7801 cttgagcacc gaatcctggg gccagaagcg ccacgtatcg gcgaggctct tggagaaccc
     7861 gaagtcatag gcgcgagtga agtactgccg cccgccgtcg agtccccgtg ccgccagcag
     7921 ttccccggta cgcagcacgc cgagcgccgg acccagttcg tccccgatca gattctgacc
     7981 gccttcgccc cgggtcagcg acaagtaggc gatctccgcc cccatacctc ggcccagcac
     8041 cgtcagcagc tcggtatcct cgtcgtccgg gtgggcggcg atcatcagga cccgtttatg
     8101 gtggcccaga aaccgaagcg actggtcaag tgcgaccagt cctccggtgc ttgggcccaa
     8161 actctgggcc aaggcacggc gggtgaggca gaggaagccg gcgagacaca ggacggccag
     8221 aagggcccgt ccggtcctca cgaatcggag cggggccgtt cgtttcgccg gccgaagatg
     8281 aaggcgagga tgaagcaggt caccgccagg gccagcagca gctgggcagc cccgatcatg
     8341 accccgtaga gcaacatgag catcccgacc gataccgtga tggtaccgat gccccggaaa
     8401 atctcgtcca ggttcttcca atgggtctgc cgtccccaga aaatggcgcc gccgagcccg
     8461 gtgatgccga gcaggagtat gccgaaccag ataaagatcc aaaaccgacg accagcgatc
     8521 atgcctgccc tcggttgcgc gtcggcccac caccccgcaa atggccgggg
//
LOCUS       DASWKS010000396         3972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2444359, whole genome shotgun sequence.
ACCESSION   DASWKS010000396 DASWKS010000000
VERSION     DASWKS010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3972
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2444359"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3523
                     /locus_tag="VGA78_11225"
     CDS             <1..3523
                     /locus_tag="VGA78_11225"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HEX9894488.1"
                     /translation="HYVVGVADASGTLLRIYVDGTQRNTAAYTGTSQTGAGELHIGNS
                     PDIILQTFNGGIDEVRVAAAARSADWISAEFNNQTSPASFYQVLDEELQADVELDLTG
                     NSLTLEAWVQFPANPSGNDGILSKNGFADGYRMVMQGAPPFVSFELTSSAGDLDTTGT
                     LAAGPWHHVVATYDGSTMRVYLDGVQDPTTRAKSGNIDRAGKELWLGHGDHAIEKAWS
                     FPWQGQLDEIRISNNARSAAWIGTQFNNQSSPGTFHTVGAEQPWSCVTPTPTATPTNT
                     PTPTATNTPTPAATDTPTPTATPSGPGWWDCNYQYRQQLTVTAGSAAVPSGYSVQVSF
                     NHAALVSGGKSLASGNDIRVVFWNGLSWVELDRMLEPGSAWNNASTRLWLKTQAALGA
                     SASDTNYYIYYGNSGAGAPPANGNNVWTRYDGFETGNLTGWNGNSVGNPGDLIEASLD
                     QAYTGTYSGKGQSDTVDPSQGMVWWNVAAQPTYFARIQIYLPASFSLPLPPPTRHVTV
                     MQFIDTGPGWDNVLSTSIAHDRTVYMWNDLAGEAYGYQLTTPVSLGAWHTLEMQATMS
                     TGPATNDGSARLWLDGNLEIQATGINMYRDNVFPTVDADNIDRFATVFYWGNPGTQVN
                     TVYVDDVQLRDYVNPEPTTGLAAEQPSTCGPTATPTPTSTPGGMGWWDANYAHRAQIT
                     VLAGSSAIAANYPTRFSFDHAGLVGLGKSLANGNDARIVYWNGATWTELARALFDDGP
                     AGQASSTWNAASTTLFFKTVAGIPASGSDTGYYLYYGYPLGGSPPTNTPSSRYFMAES
                     LGETTTTSSAYATKLQLQFTPSAASEQWVVVATWRQREIGSLGTTVSGGYGRISLNGS
                     PRTGTNDITFRQSGDLWKTFQAFLKVTGTTAQQTISIDHAWNGGGTDAIDNARIVAFL
                     IPDPANANIQYSEALAVTNDIANPTDSLTTTFSPTSAGDYVWMVNGFVHEGPGGGSNG
                     GLFAIDEGGATQQNSAESYTGVGSGFVPFIHFERHTLTTGSQTFTIRHQPDAPTGGER
                     EGLTQLLFRADVFEAVEAASSTVMDSTTSTSPVTKNTHSTTASAARDYIYLVVMGLDH
                     NVQNVTLSTFGDIRLGGTTMLADEVAIDRAAYDYQTGWAYAENVTGGRIVDTRFWAES
                     GQTAQASWSHILALRYKEPGTSLGPEE"
     gene            3564..>3972
                     /locus_tag="VGA78_11230"
     CDS             3564..>3972
                     /locus_tag="VGA78_11230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894489.1"
                     /translation="MKPATPFTQLREAAVKAARPSKARQQEEQKAELRTLLRWLLLVP
                     LIFLALFGCGWMATLGLPVASADTRSLLNADYSPWSFEVIQPVNPDIIEEIQQDQILY
                     PSTFSEPVAPTIISAPFWPTPTPTPTPTAGPTLT"
BASE COUNT          753 a         1463 c         1120 g          636 t
ORIGIN      
        1 gcattacgtg gtgggtgtgg ccgacgcctc cgggaccctg ctgcggatct acgtcgatgg
       61 aactcagcgc aatacggctg cctacaccgg tacatcccag actggcgccg gcgaactcca
      121 tatcggcaac agccccgaca tcatcctgca gacattcaat ggcggaatcg acgaggtccg
      181 ggtggccgcc gctgcccgct cggccgattg gatctccgcc gagttcaaca accagacaag
      241 cccggccagc ttctaccagg tgctcgacga ggagctgcag gccgacgtcg agcttgacct
      301 gaccggcaac agcctcacgt tggaagcctg ggtccagttc cccgccaatc cctccggcaa
      361 cgacgggatc ctgagcaaga acggcttcgc cgacggctac cggatggtca tgcagggcgc
      421 gccgccattt gtctcgttcg aactcaccag ttctgccggc gacctcgata ccaccggcac
      481 cctcgcggca gggccctggc atcacgttgt cgccacctat gacggttcga caatgcgggt
      541 ctacctcgac ggggttcagg atcccacgac ccgagcgaag tccggcaata tcgatcgtgc
      601 cggcaaggaa ctctggctcg ggcacggcga ccacgctatc gagaaggcct ggagcttccc
      661 gtggcagggc cagctggacg agatccggat ttccaacaat gctcgctccg ccgcctggat
      721 cggcacccaa ttcaacaacc agtcttcgcc ggggaccttc catacggtgg gcgccgaaca
      781 gccgtggagt tgcgtcacgc ccacgcccac tgcgactccc accaacacgc ccacccccac
      841 tgctaccaac acaccgaccc ccgctgcgac cgacaccccc acccccaccg ccacgccttc
      901 cggaccgggc tggtgggact gcaactacca ataccgccag cagctcacgg tcaccgccgg
      961 gtccgccgcg gtgcctagcg gctactccgt ccaggtgagc ttcaaccacg ccgcgcttgt
     1021 ttccggaggc aagtcgctcg ccagcggcaa cgatatccgg gtggtgttct ggaacggcct
     1081 cagctgggtg gagctggacc ggatgctgga gcccggctcc gcctggaaca acgccagcac
     1141 ccgcctgtgg ctcaagaccc aggccgccct cggcgcctcc gcctcggaca ccaactacta
     1201 catctactat ggcaactccg gcgccggcgc accgcccgcc aacggcaaca acgtttggac
     1261 tcgctacgac ggctttgaga ccggcaacct gaccggttgg aatggcaatt cggttggcaa
     1321 tccaggcgac ctcatcgaag cctccctcga tcaggcctac accggcacgt actcgggcaa
     1381 ggggcagtcc gataccgttg acccctcgca gggaatggtc tggtggaacg tcgccgccca
     1441 acccacctac ttcgcccgga tccagattta cctgccagcc agcttctcct tgccgctccc
     1501 gcctcccacc cggcatgtca ccgtcatgca attcatcgac accggtccgg gctgggacaa
     1561 tgtcctgtca acctcgatcg cccacgatcg gacggtgtac atgtggaacg atctggccgg
     1621 cgaagcctat ggctaccagc tcaccactcc cgtcagcttg ggtgcctggc ataccctcga
     1681 gatgcaggcc acgatgtcca ccggaccggc caccaacgac ggttcggccc gcctgtggct
     1741 ggacggcaac ctggaaatcc aggcgaccgg aatcaatatg taccgagaca acgtctttcc
     1801 gactgtggat gccgacaata tcgaccgctt cgccaccgtc ttctattggg gaaacccggg
     1861 cactcaggtc aacacggtct acgtcgatga tgtccagctg cgcgattacg tcaaccccga
     1921 gcccaccacc ggcctggccg ccgagcagcc ttcgacctgc ggccccaccg ccactccgac
     1981 tccgaccagc acgcccgggg gaatgggctg gtgggacgcc aactatgcgc accgggccca
     2041 gattacggtc ttggccggct cgtccgccat cgcagccaac tatcccaccc gcttcagctt
     2101 cgaccacgcc ggcctggtcg gcctcggcaa gtcgctggcc aacggcaacg acgcccgcat
     2161 cgtctattgg aacggcgcca catggaccga gctggcccgg gcgctcttcg acgacgggcc
     2221 cgccggacag gccagctcaa cctggaacgc ggccagcacg actctgttct tcaagaccgt
     2281 cgccggcatc ccggccagcg gatcggatac cggatactac ctgtactacg gctacccgct
     2341 cggcggcagc ccgcccacca acacgccgtc ctcccgctac ttcatggccg agagtcttgg
     2401 tgagaccacc acgaccagct cggcctacgc gaccaagctt cagctgcagt tcacccccag
     2461 cgcggcttcc gagcaatggg tggtcgtcgc gacctggcgc cagcgtgaaa tcgggagcct
     2521 gggcacgacc gtctccggag ggtacggaag aatctccctc aacggctctc cacggaccgg
     2581 caccaatgac atcactttcc gccagtcggg cgatctttgg aagaccttcc aggcattcct
     2641 gaaagtcacc ggaaccaccg cccaacagac gatttcgatc gaccacgcct ggaacggcgg
     2701 cggaaccgat gcgatcgaca atgcccggat cgtggccttc ctgatcccgg atccggctaa
     2761 cgccaacatc cagtacagcg aggcactggc cgtcacgaac gacatcgcca accccaccga
     2821 ctcgctgacc accaccttct ctcccaccag cgccggcgac tacgtctgga tggtgaacgg
     2881 gttcgtgcac gagggaccgg gcggcggctc gaacggcggc ctgtttgcga tcgacgaagg
     2941 cggggcgact cagcagaact cggctgagtc gtacaccgga gtgggctcag ggttcgtacc
     3001 cttcatccac ttcgagcgcc acaccctcac caccggaagc cagaccttca ccatccggca
     3061 ccagcccgat gcccccaccg gcggggaacg ggaggggttg acccagctgc tcttccgggc
     3121 cgatgtgttc gaagcggtcg aggccgcgag ctccaccgtc atggacagca ccaccagcac
     3181 ctcaccggtt accaagaaca ctcactccac caccgcctct gctgctcgcg actacatcta
     3241 tctggtcgtc atgggcttgg accacaacgt gcagaacgtg accctgtcca ctttcgggga
     3301 tattcggctc ggcgggacga cgatgcttgc ggatgaggtc gccatcgatc gcgcggctta
     3361 cgactaccaa accggctggg catacgccga gaacgtcacc ggcggccgga ttgtcgacac
     3421 ccgcttctgg gccgaatcgg ggcagaccgc ccaggccagt tggtcacaca tcctcgccct
     3481 gcgttacaag gaacccggga ccagcctggg gccggaagaa tgatcgagcc catgatggcc
     3541 ggtccggacc ggtgtctcgc acgatgaagc cagcgactcc gttcacccag ctacgggagg
     3601 cggcggtcaa ggccgcccgc ccgagcaagg cccggcagca ggaagagcag aaggccgagc
     3661 tgcgcacgct cttgcgctgg ctgctgctgg tcccgctgat cttcctggcc ctgttcggct
     3721 gcggctggat ggccaccctc ggcctgccgg tcgccagcgc cgatacccgc tccctgctca
     3781 acgccgatta cagcccctgg agtttcgaag tcattcagcc ggtcaatccg gacatcattg
     3841 aagagatcca gcaggaccag atcctctacc ccagcacttt cagcgagccg gtggcgccca
     3901 ccatcatctc ggctcccttc tggcccaccc ccacgcccac tccgacgccc accgccggtc
     3961 cgaccctcac cc
//
LOCUS       DASWKS010000397         4726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3180485, whole genome shotgun sequence.
ACCESSION   DASWKS010000397 DASWKS010000000
VERSION     DASWKS010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3180485"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="VGA78_11235"
     CDS             <1..647
                     /locus_tag="VGA78_11235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894490.1"
                     /translation="LPALVAERFPRARIVAFSTGNVYPLSPVSGPGPSESDPTGPVGE
                     YAQSALARERVLEFFSQRLEIPMVILRLNYAVEPRYGVLRDIAEQVRSQQPVDVTMGW
                     VNVIWQRDANAIALRALAHCRVPPLVLNLTGRPALSVRWLAQRFAERWGLEPRFRGDE
                     AATALLSNAARAEALFGPNQVTIDEMMDRVAEWLDQGGRSLGKPTHYEMREGIF"
     gene            647..1717
                     /locus_tag="VGA78_11240"
     CDS             647..1717
                     /locus_tag="VGA78_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX9894491.1"
                     /translation="MVPFPVRRALLGGVVIPAHPLALTPSRRLDERRQRALTRYYIDA
                     GAGGVAVGVHTTQFAIRHPKVGLYRPVLQLAAETLAEREPRLRRPMVRIAGIAGRTGQ
                     AVREAGVARDLDYHVGLLSLGALPRASDSALLEHARAVAEVVPLMGFYLQPAVGGRVL
                     SYDFWRRFVQIENVVGIKVAPFNRYDTWEVVRAVADSGRRIALYTGNDDNIVIDLLTT
                     YPVLRPGVRRPTRVRMVGGLLGHWAFWTSKAVALLKRVHHVLARHRTSRNIPGGMLGL
                     ATHITDANGAIFDAVNGYRGCIPGINEILRRQGLLRGRWCLDPNEDLSPGQMGEIDRV
                     CRAYPHLADDQFVEERLDGWLR"
     gene            2015..2338
                     /locus_tag="VGA78_11245"
     CDS             2015..2338
                     /locus_tag="VGA78_11245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894492.1"
                     /translation="MQTLASGSRGLATHINDATGAIFDAANGDRGCMPGINEILRRQG
                     LLRGRWCLDPKEDLSPGQMGEIDRVCRAYPHLADDKFVESVWTAGYADKSTEDVGSEV
                     CRRFR"
     gene            complement(2388..3074)
                     /locus_tag="VGA78_11250"
     CDS             complement(2388..3074)
                     /locus_tag="VGA78_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9894493.1"
                     /translation="MRALIVDDEAPARRRLRAALGGLPVITNVEECGTGREALDATRH
                     SPPDILFLDIEMPDLDGLAVAEAVRGERRPAVVFVTAYEQYAVRAFEVEALDYLLKPF
                     ADERVAEAVRRAEVYLGFIRRGGLPAVDRFGDVSVEYAGHQVKRGGRVVDLRPKEYEL
                     LVALLKRGGAIAGRLELLREVWGYAESVVSRTVDTHVRALRTRLEQDPARPRHILTVR
                     HYGYRLERGG"
     gene            complement(3055..4098)
                     /locus_tag="VGA78_11255"
     CDS             complement(3055..4098)
                     /locus_tag="VGA78_11255"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX9894494.1"
                     /translation="MRAALLVWAAWTGVALVFMLYIMLPSRAAQDPWEWLRATAWQLV
                     SWWSWAVWTPLVVAVTRHAVSLRSSVRLLTVHLAAGVVVSGLCTMLQGALRWAVFRGV
                     RIHYDIAGASSLPLADEWSFNLVVYGLVVGVFYAQRAGRLEAQLTQARLDALAARLRP
                     HFLFNTLHTISALVLEDPQAANRMIARLAELLRQAFSRGDEAEVTLGEELRLLEHYVA
                     IQEERFGDRLRVTVDVELDANQALVPALLLQPLVENAVTHGLAGGERHGAVTVRVEGS
                     RQGQRLRLVVRDDGPGFGAGRGVERVGLAGTRARLTDRYGSAQRLEVTDGPGGGVVVT
                     IEIPFATDAGPDR"
     gene            complement(4137..>4726)
                     /locus_tag="VGA78_11260"
     CDS             complement(4137..>4726)
                     /locus_tag="VGA78_11260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894495.1"
                     /translation="VDGGNRTLVSRTTQTVAVRPETVEIRTTHASSSDTSHSVTVVRR
                     RDLAMVHHQVRAPRDSTDVTVNGEYLTGWTVLPGTPTQLIALRLDHQVFPIEGQIPWL
                     MGLLPLEDGYQAAVPHFSEWAKQEAWDHLKVQASERVQIGETTFDCWKVDVGPLGPPG
                     YRMTRWIDKATRRVVQSALLGPAGQTEYWSWAARP"
BASE COUNT          756 a         1625 c         1583 g          762 t
ORIGIN      
        1 atctgccggc cctggtcgcc gagcggtttc cccgggcccg gatcgtggcc ttctccaccg
       61 gcaacgtcta tcctctgagc ccggtgagcg ggcccggccc gagcgagagc gatccgacag
      121 gcccggtcgg cgaatatgcc cagtcggccc tggcccgcga acgagtgctg gagtttttct
      181 cccagcggct tgagatcccg atggtcattc tgcggctcaa ctatgccgtc gagccgcggt
      241 atggggtcct gcgggacatc gcggagcagg tgcgctcgca gcaaccggtg gacgtcacca
      301 tgggctgggt caatgtgatc tggcagcggg atgccaatgc gatcgcgctt cgggcgctgg
      361 cgcactgccg ggttccgccg ctggtgctga acctgaccgg gcgcccggcc ctttcggtcc
      421 gctggctggc ccagcggttc gcggagcgat ggggcctcga acccaggttc cggggtgatg
      481 aggcggccac cgccttgctc agcaacgcgg cccgggccga ggcgctgttc ggaccgaacc
      541 aggtgacgat cgacgaaatg atggaccggg tggcggagtg gctggatcag ggcgggcggt
      601 ccctcggcaa gccgacccat tacgaaatgc gagaaggcat attctgatgg ttccgttccc
      661 ggtccggcgt gctctgctcg gtggggtagt catcccggcc catccgctgg cgctcacgcc
      721 ctcgcgaagg ctggacgagc ggcgccagcg ggcgctgacc cgctattaca tcgacgccgg
      781 cgccggcggg gtcgcggtcg gagtgcacac gacccagttc gcgattcgcc atccgaaggt
      841 cggcctgtac cggccggtgc tccagctcgc ggccgaaacc ctggccgagc gagagccgcg
      901 gttgcgccgg ccgatggtgc ggatcgcggg aattgcggga cgcaccgggc aggcggttcg
      961 cgaagccggg gtcgccaggg atctggacta ccacgtcgga ttattgagtc tcggcgcgct
     1021 gccccgcgcc tccgattcgg cgctgctgga acacgcccgg gcggttgcgg aggtcgtccc
     1081 gctcatgggc ttctatctgc agccggcggt aggggggcgg gtcctgagct atgacttctg
     1141 gcgccgcttc gttcagatcg aaaacgtggt cgggatcaag gtggccccct tcaaccgcta
     1201 cgacacctgg gaagtggtgc gcgctgtcgc cgactcgggc cggcggatcg cgctctacac
     1261 cggcaacgac gacaacatcg tgatcgacct gctgaccacc tatccggtgc tgcgccccgg
     1321 ggtgcgccgt ccgacccggg tccggatggt gggcggtctg ctgggccact gggctttctg
     1381 gacctcgaag gcggtggcct tgctcaagcg ggtccatcac gtgctggccc ggcatcggac
     1441 cagtcgcaac attcccggcg gcatgctggg gctggccacc cacatcaccg atgccaacgg
     1501 cgcgatcttc gacgcggtga acggctaccg gggctgcatt cccggcatca acgagatcct
     1561 gcgacggcag gggctgctcc gcggccgctg gtgcctggat ccgaacgaag atctctcgcc
     1621 ggggcagatg ggcgagatcg accgggtgtg cagggcctac ccgcacctgg ccgacgatca
     1681 gttcgtagag gagcggctag acggctggct gcgatgacag atcctcaggg aggagaaatc
     1741 tgcggatgct gttagggcct ggtgtgcagg cggggaaaca gcaatccaca gattacgcag
     1801 atgaaatcgc gtggccctca atgctcgagc gtgtttgttg ttatgaaatc ccccgcaatc
     1861 cgcgcaatcc gtgtcatcgg tggatgctgt tttgtttttc actgcaactg aacctcaggc
     1921 ggtacgtcgc taaggcacgg cgctgaagcg tctcagattg cccgactcta gcaactcgtg
     1981 ctgcgccggc gtcagcttct ccagcagatc gagcttgcag acgcttgctt caggcagccg
     2041 tgggctggca acccacatca acgatgccac cggggccatc ttcgacgcgg ccaacggcga
     2101 ccggggctgc atgccgggca tcaatgagat cctgcgacgg caggggttgc tccgcgggcg
     2161 ctggtgcctg gatcccaagg aggatctctc gccggggcag atgggcgaga tcgaccgagt
     2221 gtgccgggcc tacccgcacc tggcggacga taagttcgtc gagagcgtct ggacggctgg
     2281 ctacgctgac aaatccaccg aggacgtggg gtccgaggtg tgccgccggt tccggtgata
     2341 ccagaaggtg gatttcattc tgctctgagt tgccccgccc gcgacgctca ccccccgcgc
     2401 tccagccggt agccgtagtg gcgcaccgtc agaatgtgac ggggccgggc ggggtcctgc
     2461 tccaagcgcg tccgcaaggc ccgcacgtgg gtgtccaccg ttcggctgac cacgctctcc
     2521 gcatagcccc agacttcccg gagtagctca aggcgacccg cgatcgctcc accgcgcttg
     2581 agcagcgcca ccagcagctc gtattccttg ggacgcaggt ccaccacccg gccgccgcgc
     2641 ttgacctggt gcccagcgta ttccacgctg acatcgccga accggtccac cgcaggcaac
     2701 ccgccccgcc ggatgaagcc gaggtacacc tccgcccgtc gcaccgcctc ggcgacgcgt
     2761 tcgtcggcga agggcttgag cagataatcc agagcctcga cctcgaatgc tcgcaccgcg
     2821 tattgctcgt atgcggtgac gaacaccacc gccgggcggc gctcgccgcg caccgcctcc
     2881 gcgaccgcca ggccgtccag atcgggcatt tcgatgtcca gaaacagaat gtccggtggg
     2941 ctgtgccggg tcgcgtccag ggcttcgcgg cccgtgccgc actcctcgac gttggtgatg
     3001 accgggagcc cgccaagcgc cgcgcgaagc cggcgacggg ccggcgcctc gtcgtcaacg
     3061 atcagggccc gcatcggtcg cgaacgggat ctcgatcgtc accaccactc cacccccggg
     3121 cccgtcggtg acttccagcc gctgggcgga accgtaccgg tctgtgagcc gggcccgcgt
     3181 gcccgccagc cctacgcgct cgacgccacg cccggcgccg aaacccggcc cgtcatcccg
     3241 aaccaccaga cggagtcttt ggccctgacg gctgccttcc acccgcaccg tcacggcccc
     3301 gtgcctctcg ccccccgcaa ggccatgggt caccgcgttc tccaccagcg gttggagcaa
     3361 cagggcaggg accagcgcct ggttcgcgtc cagctccacg tccacggtca cccgcaagcg
     3421 atccccgaac cgttcctcct ggatcgccac gtaatgttcc agcagccgta gctcctctcc
     3481 cagcgtcact tcggcctcgt ccccacggct gaacgcctgg cgcaacagct cggcgaggcg
     3541 cgcgatcatg cggtttgccg cctgcgggtc ctccagcacc agcgccgaaa tcgtgtgcag
     3601 cgtgttgaac aggaagtgcg ggcgcaggcg agccgcgagc gcgtccagcc gcgcctgggt
     3661 gagctgcgcc tccaggcggc cggcgcgctg cgcgtagaag acgcctacca ccaggccgta
     3721 gaccaccagg ttgaaggacc actcgtcggc caggggaagg ctgctggcgc cggcgatgtc
     3781 gtagtgaatc cggaccccgc ggaagaccgc ccaacggagg gctccctgga gcatggtgca
     3841 gagcccggac acgaccaccc cggccgcgag atggactgtg aggagcctta cggacgagcg
     3901 caagctcacg gcgtggcggg tcacggccac gaccagcggt gtccagaccg cccagctcca
     3961 ccagctcacc aactgccagg cggtggcacg cagccactcc caggggtcct gagccgcccg
     4021 gctgggcagc attatgtaca gcatgaacac caaggcgacg ccggtccagg cggcccagac
     4081 cagcagcgcg gcgcgcatcc agtctggcgc acgggactcg gtcccgatca cgctgttcag
     4141 ggcctggccg cccaggacca gtattccgtc tgcccggcgg ggccgaggag cgcgctctgc
     4201 accacgcgcc gggtggcctt gtcaatccag cgggtcatgc gatagcccgg cggcccgagg
     4261 gggccgacgt ccaccttcca gcagtcgaag gtggtttccc caatctgaac ccgctccgag
     4321 gcctggacct tcaggtgatc ccatgcttcc tgtttggccc attcggaaaa gtgcggcacc
     4381 gccgcctggt atccatcctc gagcggcagc agccccatga gccacggaat ctggccctcg
     4441 atggggaaga cctggtggtc cagccgaagt gcgatcagct gcgttggagt gccgggaaga
     4501 acggtccagc cggtcaggta ctcgccgttg acggtgacat cggtagagtc gcgcggcgcc
     4561 cggacctggt gatgcaccat cgcgagatcc ctccggcgca ccacggtcac cgagtggctg
     4621 gtatcggacg aggaagcatg cgtggtacgg atctcgacgg tttccggtct caccgcgacc
     4681 gtctgggtgg tccggctgac gagggtgcga ttcccgccgt ccactc
//
LOCUS       DASWKS010000398         7508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2445838, whole genome shotgun sequence.
ACCESSION   DASWKS010000398 DASWKS010000000
VERSION     DASWKS010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7508
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2445838"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VGA78_11265"
     CDS             <1..407
                     /locus_tag="VGA78_11265"
                     /inference="COORDINATES: protein motif:HMM:NF015181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobB"
                     /protein_id="HEX9894496.1"
                     /translation="PALVDREGTDTWRHFHEGSSERTLIAAPDMRVLFERAPDDTDPE
                     PLARRYMGDVDLVLVEGFKRASLPKVEVYRKGIGVPPLLDPAAPNAGDWIAIVTDDST
                     LRAGCRVLRFMDTMWLSLLAGLAWERAKVLAP"
     gene            350..1723
                     /gene="glp"
                     /locus_tag="VGA78_11270"
     CDS             350..1723
                     /gene="glp"
                     /locus_tag="VGA78_11270"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEX9894497.1"
                     /translation="MALAPRRSGLGAGQGAGSIGPLAARDAALRILAEVRRQPALRIP
                     LDDALGCVLAEPVVSPLDIPAWTNSAMDGYAARGDDVRGASRDSPRILRVVDTIPAGV
                     FPARVIGAGECARIFTGAPLPEGADTVIRQEDTDFNLKSASDRVEIFSDRDVGANIRR
                     AGEDIRKGSTVFETGTDLGAAQLGVLASLAVSHPVVYRRPRVGILGSGDEIVDVDRPE
                     EILSGRKIASSNTHTLVALVRLAGGLPVNLGIARDTPESLREHLQGTLDCDLLVSTAG
                     ISVGEHDHVKAVLEEMGADLKFWKLRMRPGAPVGFGLLPGVAPSGRSPLPWIGLPGNP
                     VSTMVTFELFVRPAIRAMMGHRLPFRRTVKARLAEPIKLGPKLQHFLRAVVADGSGHP
                     ERSEGSAPAVLEARLTGPQGSGILTSMARANALLIIPEGQHETPEGSLADVLLLDDPR
                     HIAEPPF"
     gene            complement(1728..2663)
                     /locus_tag="VGA78_11275"
     CDS             complement(1728..2663)
                     /locus_tag="VGA78_11275"
                     /inference="COORDINATES: protein motif:HMM:NF016291.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF533 domain-containing protein"
                     /protein_id="HEX9894498.1"
                     /translation="MSERSVDMTGEEQRLIAASLLGAACADGHLGADERQRMAILIDD
                     LGGDKVFRAALANPIDPEELGRLLHSSEARRTAYQLAVLVCEADGVLSAQEVTYLDRL
                     RGALELSEASAKGLRIEAEHWRDPGLPPTAPSVAGTIERTILQYAILAGAAELLPQTA
                     ASIAVIPLQLKLVYDIGRHHGVHQAQDQAKELLATFGIGATSQVVESLARRLLGGVVK
                     RVGGGGMLGGLLGEAAETVTGTVVAFATTYALGHASKVYYEKGRSLSQADLQRLFQQF
                     QNDARTLYPKVENEIRLQAQNLDVESLLAKVRSLA"
     gene            2918..3745
                     /locus_tag="VGA78_11280"
     CDS             2918..3745
                     /locus_tag="VGA78_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HEX9894499.1"
                     /translation="MNNVKTFMLMAGLMALFLIIGTAIGGQQGLIMALVLGSLMNFVM
                     YFFSDRMVLAMYRAKVVSEQEAPDLYRMVDRLRQRAGLPMPVVAVANQEQPNAFATGR
                     SPSKAVVAVTTGLLRYMPADELEGVIAHELAHIKNRDMLISTVAAGVAGAIGYLPWLF
                     LFGQGDDEGHHPIVAIALMIIGPIAAMIIQYAVSRQREFEADRVGAEILGRPLPLASA
                     LRRLDSMARQIPMHVQPAAAPLAQVNPFSGHARGVLKLFMTHPPTAERVARLEAMAR"
     gene            3759..4682
                     /locus_tag="VGA78_11285"
     CDS             3759..4682
                     /locus_tag="VGA78_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX9894500.1"
                     /translation="MPIHAPAVWLGFSALVLGLLALDLGVLNRRSHVLSIREAATWSA
                     SIVVLALLFGTFLWWLEGTNTALEYFSGYLIELSLSVDNLFVFILIFQYFAVPAELQP
                     RVLKWGILGAMVMRGIMIVLGALLLQRFHWIIYLFGAILIVTGIRLFKGEQERIEPEK
                     NPIIRLARRLMPVTGAYEGQAFFVRSATRWLATPLLLVVLFVEWSDLVFAIDSIPAIF
                     AVTRDPFIIYSSNVFAILGLRALYFVLAGAMDRFVHLKVGVAGILVFVGIKMVISAWI
                     HIPTSVSLGVIVLFLAAATWASIRGEERLPT"
     gene            4849..5304
                     /locus_tag="VGA78_11290"
     CDS             4849..5304
                     /locus_tag="VGA78_11290"
                     /inference="COORDINATES: protein motif:HMM:NF040341.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6174 domain-containing protein"
                     /protein_id="HEX9894501.1"
                     /translation="MLPRLLLTSMLSVTLAGCQTIFGPSEEHELDDAWDHWLSLRIVD
                     YRYEVIRSCYCGGPAVGQRVVVVVHDDVVVNAWYAQTGEELPASALQHLPTVDDLFLI
                     VDDALRTGADELDVRYDPSFGFPRLIEVDYQRHAVDDELTVRADDLRPI"
     gene            5395..6756
                     /locus_tag="VGA78_11295"
     CDS             5395..6756
                     /locus_tag="VGA78_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9894502.1"
                     /translation="MPSTTGWLARLGLGTPQARAWAMYDWANSAMVTLIVTAVFPIFY
                     KSVTAVGLPDTVATYRFGIATTVALAISAVLSPLLGTVADFTAGKKRFLGMFLLLGVL
                     STGLMFFLQQGMWAGALVLFMLANVGANGSFVFYDALLPHVSPPEEMDRLSTSGYALG
                     YLGGGVLLLLALAMIQAPGLFGLPSGEGLTPAQASLPARISFLLTAVWWVVFSIPLFR
                     RIPEPPALPRPATPAAGGALRTSIRQLGGTLRHLRQYRQAFLLLIAFLIYNDGIGTII
                     RMATIYGEERHLSRTVMIGAIAAVQFIGIPFSFLFGRLAGRIGAKRSIFIGLLVYVGI
                     SVLGYYMTTPLHFIVLACLVGTVQGGTQALSRSLFASMIPSQSSGEFFGFFSVFEKFA
                     GIIGPLFFAVMVRSTGSSQSAILSIILFFVVGGALLALVNVEEGQQQARAAEAQLATH
                     SWG"
     gene            6758..7177
                     /locus_tag="VGA78_11300"
     CDS             6758..7177
                     /locus_tag="VGA78_11300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HEX9894503.1"
                     /translation="MTSHTHYLWFETKRRQEIIDITDEVQAQVAASGVREGMALVSAM
                     HITASVFVNDHESGLWHDILHWLEHSVAPWSPERYRHNDTGEDNAAAHLRSLTIGHEV
                     ILPITVGKLDLGPWQRVFYGEWDGQRRKRVIVKVLGE"
     gene            7315..>7508
                     /locus_tag="VGA78_11305"
     CDS             7315..>7508
                     /locus_tag="VGA78_11305"
                     /inference="COORDINATES: protein motif:HMM:NF040341.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6174 domain-containing protein"
                     /protein_id="HEX9894504.1"
                     /translation="MRSILVSVLGLAAACSHSTGPSDPVTALALARAKWFQAEVSNYQ
                     YTILRGCECLPESIGPVVIEV"
BASE COUNT         1144 a         2519 c         2438 g         1407 t
ORIGIN      
        1 atccggcgct ggtcgaccgc gaggggaccg atacctggcg ccactttcac gaaggatctt
       61 ccgaacgcac cctgatcgcg gcacccgaca tgcgagtgct gttcgagcgg gctcccgacg
      121 acaccgatcc ggaaccgctg gcgcgacgct acatgggcga cgtggacttg gtgctggtgg
      181 aagggttcaa acgggcgtca ctgcccaagg tcgaggtcta ccggaaggga atcggggtcc
      241 cgcccctgct cgacccggct gcccccaacg ccggcgattg gatcgccatc gtgacggacg
      301 attcaacgct ccgggcggga tgccgggtgc ttcgcttcat ggacacgatg tggctctcgc
      361 tcctcgccgg tctggcctgg gagcgggcca aggtgctggc tccataggtc cgctggccgc
      421 ccgcgatgcc gccctccgca ttctggcgga ggtccgccgt cagcccgctc tccgtatccc
      481 gctggacgac gcgctcggct gtgtgctggc agagccggtc gtcagtcccc tcgatatacc
      541 cgcctggacc aactcggcga tggacggcta cgcggcgcgg ggagacgatg tgcgcggtgc
      601 cagccgggac tcgccccgga tcctgcgggt ggtcgacacc attcccgccg gcgtctttcc
      661 ggctcgcgtc atcggagccg gggagtgcgc ccggatcttc accggtgcgc cgctgcccga
      721 aggggccgac acggtcatcc gccaggaaga caccgatttc aacctgaaga gcgcgagcga
      781 tcgggtcgag atcttcagcg accgcgacgt gggcgccaac attcgtcgag ccggtgagga
      841 catccggaaa gggagtacgg tattcgagac cgggaccgac ctgggggccg ctcagctcgg
      901 ggtcctggcg tcgctggcgg tctcacatcc ggtggtctat cgccgtcccc gggtcgggat
      961 tctcggcagc ggggatgaga tcgtggatgt ggatcggccg gaggagattc tgtcgggccg
     1021 aaagatcgcc agctccaaca cccataccct ggtggcgctg gtgcgactgg ccggcggcct
     1081 cccggtcaat ctggggatcg cccgggatac cccagagagc ctgcgggaac atctccaggg
     1141 gaccctcgac tgtgatttgc tggtgagtac cgccggcatc agcgtgggag agcacgacca
     1201 cgtcaaggcg gttctggagg aaatgggtgc ggatctgaag ttctggaaat tgcgcatgcg
     1261 ccccggcgcc ccggtgggct ttggactcct tcccggagtc gcaccgtcag gtcgttcccc
     1321 gcttccctgg atcggcctgc cgggaaaccc ggtcagcacc atggtcacgt tcgagctctt
     1381 cgtgcgtccg gccatccgcg ccatgatggg gcatcggctg ccgttccgcc gtactgtcaa
     1441 ggcgcgcctg gcggagccaa tcaagctggg gcccaaactg cagcacttcc tccgggccgt
     1501 cgtggccgat ggcagcggtc atcctgagcg cagcgaagga tctgctcccg cggtcctcga
     1561 agcccgcctg accgggcccc agggatccgg gatcctcacc tcgatggcgc gggcgaatgc
     1621 gctgctgatc attcccgaag gccagcacga gaccccggag ggctcgctgg cggacgttct
     1681 gctgctggac gatccccgcc acatcgccga gccgcccttc tgactctcta ggccagggac
     1741 cggaccttgg cgagcaggga ctcgacatcg aggttctggg cctgcagcct gatctcgttt
     1801 tcgactttgg gatagagggt gcgggcatcg ttctggaatt gctggaacag ccgctgcaga
     1861 tcggcttgcg acagggagcg tcccttctcg tagtagacct tggatgcgtg acccagcgcg
     1921 taggtcgtgg cgaaggcaac caccgtgccg gtcacggtct ccgccgcttc ccccagcagt
     1981 ccccccagca tgcccccacc gcctacccgc ttcaccactc cgcccagcag cctgcgcgcg
     2041 agcgattcga cgacttgcga ggtcgccccg atgccgaacg tggccagcag ctccttcgcc
     2101 tgatcctggg cctggtgcac gccatgatgt cggccgatgt catacaccag cttgagctgg
     2161 agcgggatga ctgcgattga ggcggcggtc tgcggcaaca gctcggctgc gccggccaga
     2221 atggcgtact gcaggatggt ccgctcgatc gttccggcca ctgagggagc ggtgggcggc
     2281 agtcccggat cacgccaatg ctcggcctct attcggaggc ccttggcgga ggcctcggac
     2341 agctcgagcg cgccgcgcaa ccgatccagg tacgtcacct cctgggccga cagcacgccg
     2401 tcggcttcgc acaccagtac cgccagctga taggcggtcc gccgggcctc ggacgagtgg
     2461 agcaaccgtc ccagctcctc cgggtcgatg ggattggcca gcgccgcccg gaagaccttg
     2521 tcacccccca gatcgtcgat caggatggcc atccgctgcc gctcgtcggc gccgaggtgt
     2581 ccatcggcgc aggctgcgcc cagcagtgaa gccgcgatca ggcgttgttc ctcgccggtc
     2641 atgtcgacgc tccgttcgga caccgagaat atcccctcaa tcctccagac gggctaccca
     2701 accctggctg ggcgcgccta tattccggct cggaagggga gtagctcgtc cgccggcagc
     2761 tgacatggcg gacgcgggat cgtcaagact gtcgcctccg ggcggcacgg tcccccggga
     2821 gcacggtcca ggccggactc agagcgagac cttcgtcgat cgcgaacgcg cggcgacggg
     2881 gtctcgcttt tcgttttact acaggtggag gattaccgtg aacaacgtca agaccttcat
     2941 gctcatggca ggtctgatgg ccctgttcct gattatcggg acggctatcg gggggcaaca
     3001 gggactgatc atggccctgg tactgggctc gctcatgaac ttcgtcatgt acttcttctc
     3061 cgaccgcatg gtgctcgcca tgtaccgcgc caaagtggtc agcgagcagg aggccccgga
     3121 cctgtaccgg atggtcgatc gcctgcgcca gcgtgccgga ctgccgatgc cggtggtcgc
     3181 ggtcgccaac caggagcagc ccaacgcctt cgcgaccggc cggagcccca gcaaggcggt
     3241 ggtggccgtc accacgggcc tgctgcggta catgcccgcg gacgagctgg agggcgtcat
     3301 cgcccacgag ctggcccaca tcaagaaccg cgacatgctg atctccaccg tcgcggccgg
     3361 ggttgccggt gcgatcgggt atctgccctg gctgttcctg ttcggccagg gcgacgacga
     3421 ggggcaccac cccatcgtgg cgatcgccct catgatcatt ggtccgatcg cggccatgat
     3481 catccagtac gcagtctccc gccagcgcga gttcgaggcc gaccgggtgg gcgccgagat
     3541 cctgggccgg ccgctgccgc tggccagcgc gttgcggaga ctggactcca tggcgcggca
     3601 gatcccgatg cacgtgcaac ccgccgcggc accgctggcc caggtgaatc ccttctcggg
     3661 acacgcccgc ggagtgctca agctgttcat gacccatccg cccactgcgg agcgggtggc
     3721 ccggctggaa gcgatggcgc ggtagtcggg tcgggtcgat gccgatccac gctcccgcgg
     3781 tttggctggg tttcagcgcc ctggttctcg gcctgctggc cctggacctg ggcgtcctca
     3841 accgccgatc ccacgtactc tcgattcggg aggccgccac ctggagcgcc agcatcgtcg
     3901 tgctggcgct tctgttcggt accttcctct ggtggctcga gggcacgaac accgcgctgg
     3961 agtacttctc cggctatctg atcgagctgt cgctcagcgt cgacaacctc ttcgtcttca
     4021 tcctcatctt ccagtacttc gcggtcccgg cggagctgca gcctcgggtg ctcaagtggg
     4081 gcatcctggg ggcgatggtc atgcgcggca tcatgatcgt cctgggcgcg ctcctgctgc
     4141 agcggtttca ctggatcatc tatctgttcg gggccatcct gatcgtgacc ggcatccggc
     4201 tattcaaggg cgagcaggaa cggatcgagc ccgagaagaa tcccatcatc cgcctggccc
     4261 ggcggctgat gccggtgacg ggcgcctatg aagggcaggc ctttttcgtc cggtccgcca
     4321 cccggtggtt ggccacaccc ttgctgctgg tggtgctgtt cgtggagtgg agcgatctgg
     4381 tcttcgccat cgacagcatt ccggccatct tcgccgtgac ccgtgacccg ttcatcatct
     4441 acagctccaa tgtgttcgcc atcctgggac tgcgggcgct gtacttcgtc ctggccggcg
     4501 ccatggaccg gttcgtccat ctcaaggtgg gggtagccgg cattctggtg ttcgtcggca
     4561 tcaagatggt gatttccgcc tggatccata tccccacctc ggtgtccctg ggcgtcatcg
     4621 tgctgttcct ggcggcggct acctgggctt cgatccgcgg cgaagagcgt cttcccacct
     4681 gacactcgcg tcgcctccgg gggacacctc gctacggggc gcctcgggaa gcgagcccta
     4741 acgccttgtg gggggagtga tttccccccg cgaaccagac ggcacgactt ctgccttcga
     4801 ccccttcgac cccttcgacc cgttcgacca cttcgaccgc cttcgacaat gctgccacgc
     4861 ctgctcctca catcgatgct gagtgtcacg ctggccgggt gccagaccat cttcggaccc
     4921 tcggaggaac acgaactcga tgatgcgtgg gaccactggc tctcgctccg catcgtcgac
     4981 tatcgctacg aggtgatccg gtcctgctac tgtggcggtc cggcggtggg acagcgggtg
     5041 gtggtcgtgg tgcatgatga cgtggtcgtg aacgcctggt acgcccagac gggggaggag
     5101 cttccggcct ccgccctgca gcacctgccc acggtggacg acctctttct gatcgtggat
     5161 gacgcgcttc gcaccggagc cgatgagctc gacgtccgat acgaccccag ctttggattc
     5221 ccccggctga tcgaggtgga ctaccaacgg cacgcggtcg atgatgagct gacggtccgg
     5281 gccgacgact tgagaccgat ctaaaactcg gaggaggcgg gagaggggag aggggaaacg
     5341 tggtctcccg cctcccctct cccccctccc cagtgccaag tagattcccc gcccatgcca
     5401 tcgaccaccg gctggctggc tcggctcggc ctgggtacac cccaggctcg ggcgtgggcg
     5461 atgtacgact gggccaattc ggccatggtc acgctcatcg tgaccgcggt gttccccatc
     5521 ttctacaaga gcgtgaccgc ggtcgggctg cccgacacgg tcgccaccta tcgcttcggt
     5581 atcgcgacga cggttgccct ggccatcagc gccgtgctgt cgccgttgct gggcacggtg
     5641 gcggacttca ccgccgggaa aaagcgcttc ctggggatgt tcctgctgct gggcgtgctc
     5701 agtaccggcc tgatgttctt cctgcagcag ggcatgtggg ccggagcgct ggtgctgttc
     5761 atgctggcaa acgtcggtgc caacggcagc ttcgtcttct acgatgcgtt gctgccgcac
     5821 gtctcgccgc ccgaggagat ggaccggctc tcgaccagcg gctacgcgct ggggtatctg
     5881 ggtggcggcg tcctgctgct gctcgccttg gcgatgatcc aggcccccgg tctcttcggc
     5941 ctgccgtcgg gcgaaggact gacgccggcc caggcctcgc tgccggcccg gatcagcttc
     6001 ctgctcaccg cggtctggtg ggtggtgttc tccatcccgc tgttccggcg aatccccgag
     6061 ccgccggccc tcccccgtcc cgcgaccccg gccgcggggg gcgccttacg gacctcgatc
     6121 cggcagttgg gagggaccct ccgtcacctg cggcagtacc ggcaggcctt cctgctcctg
     6181 atcgcgtttc tcatctacaa cgacgggatc gggaccatca tccgcatggc gacgatttac
     6241 ggcgaggaac ggcacttgag ccgtaccgtc atgatcggag ccattgccgc ggtgcagttc
     6301 atcgggattc ccttttcgtt tctgttcggt cggctggccg ggcgcatcgg cgccaagcgg
     6361 tccatcttca tcggactgct ggtctacgtc ggcatttcgg tgttggggta ctacatgacc
     6421 acgcccctgc acttcatcgt actcgcctgc ctggtcggta cggtccaggg cgggactcag
     6481 gcattgagcc gctcgctctt cgcgtccatg atccccagtc agagctcggg cgagttcttc
     6541 ggcttcttca gcgtgttcga gaagttcgcc ggcatcatcg ggccgctctt cttcgcggtc
     6601 atggtccgga gcaccggatc gagccagagc gcgatcctca gcatcattct gttcttcgtg
     6661 gtgggtggcg ccctgctggc gctggtcaac gtggaggaag ggcagcagca ggcgcgggcc
     6721 gccgaggcac agctggcgac ccactcctgg ggatgagatg accagtcaca ctcattatct
     6781 ctggttcgag accaagcgcc gccaggagat catcgacatc accgatgagg tgcaggccca
     6841 ggtggccgcg agcggcgtcc gcgaaggaat ggcgctggtc tccgcgatgc acatcaccgc
     6901 ctccgtattc gtgaacgatc acgagtccgg cctgtggcac gatatcctgc actggctgga
     6961 acacagcgtg gcgccctgga gcccggagcg ttaccggcac aacgacaccg gcgaggacaa
     7021 tgccgcggcc catctccgca gcctgacgat cggccatgag gtcatccttc ccatcaccgt
     7081 cgggaaactg gatctgggac cgtggcaacg ggtgttctac ggggaatggg atggacagcg
     7141 gcgcaaacgg gtaatcgtga aggtcctggg agaatagccg ttttgcccac ccacgtgtca
     7201 gaacgacact tccccggcgc ccatccacaa ccgagtcacc cgcctaacct tttgtggtac
     7261 tgtcagttgg cataatccag ctcgcggcac gccttctgcc tttgggtccg gatcatgcgt
     7321 tcgatcctgg tttccgtcct ggggctcgcc gcggcctgct cccactccac cggcccgagc
     7381 gaccccgtca cggcgctggc gttggcccgg gccaaatggt tccaggccga ggtcagcaat
     7441 taccagtaca ccatcctgcg gggctgcgag tgcctccccg agagtatcgg cccggtggtg
     7501 atcgaggt
//
LOCUS       DASWKS010000399         2785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_585415, whole genome shotgun sequence.
ACCESSION   DASWKS010000399 DASWKS010000000
VERSION     DASWKS010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_585415"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VGA78_11310"
     CDS             complement(<1..483)
                     /locus_tag="VGA78_11310"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HEX9894505.1"
                     /translation="MSVRYQSVNWNRQKRLYDLVLAAGVAASVGGFAAVSLSRPHATV
                     ETALIRGLGLTAFVLLHVILVIGPLARLDRRFLPLLYNRRHLGVTMALLALGHAAFAT
                     LQYHGGGDVHPVVSLLQGAPTTRFPGEFPFEYLGLAALLVLALMAATSHDFWLSVLTP
                     P"
     gene            complement(575..799)
                     /locus_tag="VGA78_11315"
     CDS             complement(575..799)
                     /locus_tag="VGA78_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894506.1"
                     /translation="MSLTAATLLASLVAGYLAAGMGFALPFAFRWAGRLDPVAASGTR
                     GFRLLIIPGAMLLWPWLGLRLWRASRTRRP"
     gene            920..1519
                     /locus_tag="VGA78_11320"
     CDS             920..1519
                     /locus_tag="VGA78_11320"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894507.1"
                     /translation="MNAEAAAGIKPASDFETLLADVLEQAYGTAMRLTGNPADAEDLV
                     QDAALLAHRGFGSFTTGSNFRAWFYRILLNRFYSNYRRQRRAGVAVELEDTPELYLYE
                     QAEAAGLKPSEDTAAALLDRLDAESVEQALAALPDDFRAAATLYFMQDLPYQEIAEIL
                     NVPIGTVRSRLHRARRMLRKALWTVAQERGIVGPAALEE"
     gene            1522..1773
                     /locus_tag="VGA78_11325"
     CDS             1522..1773
                     /locus_tag="VGA78_11325"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9894508.1"
                     /translation="MDQPTHFDCRAAFARLEDYLDRELSAGDVRCIEEHLALCEVCAR
                     EFKFEAGILCALKQKLRCVSAPPDLLDRIRTAIERSRQL"
     gene            1846..>2785
                     /locus_tag="VGA78_11330"
     CDS             1846..>2785
                     /locus_tag="VGA78_11330"
                     /inference="COORDINATES: protein motif:HMM:NF028457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5117 domain-containing protein"
                     /protein_id="HEX9894509.1"
                     /translation="MRYQLPASSRQLLLGFASIIALPVHAQLPSTADKTRGMQKLDGF
                     VPIYWDSTAGKVFLELVPGQELLYVVSLPAGLGSNDIGLDRSQLGGEAIVRFDRIGPK
                     VLMVQPNLRYRAERTTNPAERRAVAESFASSALWGFKVEAAADGRVLVDATDFALRDG
                     HGVIPALARNRQGTYRLDLSRSAVYLPRTKAFPRNSELEVTLTFAGDQPGDWVRDVTP
                     TPGAITVRQRHSFIQLPDAGYTPREFDPRAGYFDFAYADYSAPFPEPVNRRFITRHRL
                     EKRDPSAPISDPVKPIVYYLDPGVPEPVRTALLDGAR"
BASE COUNT          477 a          950 c          931 g          427 t
ORIGIN      
        1 cggaggtgtc agcaccgaaa gccagaagtc gtggctggtg gcggccatca gggcgagcac
       61 cagcagcgcg gccaggccca ggtattcgaa gggaaactcg ccggggaaac gggtagtagg
      121 tgcaccctgc aacaggctca cgacgggatg gacgtcccca ccgccgtgat actgcagcgt
      181 ggcgaaggcg gcgtgcccca gggcgagcag agccatggtg acgcccagat ggcggcgatt
      241 gtacagcagg gggagaaagc gccggtccag tcgggccagc gggccgatca ccaggatcac
      301 gtggagcagg acgaaggcgg tgaggcccag tccccgaatc agcgcggttt cgaccgtggc
      361 gtggggccgc gagagcgaca ccgcggcgaa tccgcccacc gacgccgcga ctccggccgc
      421 gagcaccaga tcatagagcc gcttctgccg attccagttg accgactggt agcgaacgct
      481 cattggccga gcccgatcgc gagcagcacc agcggtagcg ccaccgcggc cacgatgaca
      541 atcagcacga catgggcccg gcggagcggt cggatcacgg ccgcctcgtc cggctcgcgc
      601 gccacagccg cagccccagc cagggccaga gcagcatcgc gcccgggatg atcaagaggc
      661 ggaagccacg ggtgccggag gccgcgaccg gatccaggcg gccggcccaa cggaaggcga
      721 atggcagggc aaaccccatc cccgccgcca gatacccggc caccagtgat gccaacaggg
      781 ttgccgcagt gagtgacatg gcttctcccg aacgcccctg gcccgcggaa gattcccacc
      841 acccgggaac ttcccgggct tcgggcgcat tacgattgga gattgcgcca gcccgcgcga
      901 cggcgctact ctccgcgcca tgaatgcgga ggctgccgcc ggaatcaagc cggcatccga
      961 tttcgagacg ctgctggccg acgtgctcga acaagcctat ggcacggcca tgcgacttac
     1021 cggaaacccg gccgacgccg aggatctggt gcaggacgct gcgctcctgg cccatcgcgg
     1081 cttcggcagc ttcaccaccg gcagcaactt ccgggcgtgg ttctatcgga tcctgctgaa
     1141 ccggttctac tccaactacc gccgccagcg gcgggctggt gtggcggtcg aactggaaga
     1201 tacgcccgag ctgtacctct acgagcaggc cgaggcggcg gggctcaagc cgagcgagga
     1261 cacggcagcg gcattgctgg accggttgga tgccgagtcg gtggagcaag ccctggcggc
     1321 gctgccggac gacttccgcg ccgccgcgac gctgtacttc atgcaggatt tgccgtacca
     1381 ggagatcgcc gagattctca acgtgcccat tggaaccgtt cgctcgcggt tgcaccgggc
     1441 tcgccggatg ttgcggaagg cgctctggac ggtagcacag gagcgcggca tcgtcggtcc
     1501 agcggcgctg gaggagtgat cgtggaccaa ccaacccact tcgactgccg ggccgccttt
     1561 gcacgcctcg aggactatct cgatcgagag ctgtcggccg gcgatgtgcg ctgcatcgaa
     1621 gagcatctgg cgctgtgcga ggtgtgcgcc cgcgagttca agttcgaagc cgggatcctg
     1681 tgtgcgctga aacagaagct ccgctgcgtt tcggctcccc ccgacctgtt ggaccggatc
     1741 cggaccgcga tcgaacggtc ccggcaactc tgactcgcgg gcggggtctc cccgccgttg
     1801 tcgtatatat tggtcccgcc acgcctttct ccgggaccga tcaccatgcg ctaccagctt
     1861 cccgcttcca gtcgccagct gctcctcgga ttcgcctcga tcatcgccct accggttcat
     1921 gcccagctgc cgtcgaccgc ggacaagacg cgagggatgc agaagctgga tggcttcgtt
     1981 ccgatctact gggacagcac cgccggcaag gtctttctgg aactggtccc cgggcaggaa
     2041 ctgctttacg tcgtctcgct gccggccggt ctcgggtcca acgatatcgg gctcgatcgg
     2101 agccagctgg gcggcgaggc gatcgtccgc ttcgatcgca tcggccccaa ggtcctcatg
     2161 gtgcagccca acctgcgcta tcgggccgag cgcaccacca acccggctga gcgccgcgcg
     2221 gtggccgagt cattcgccag ctcggcgctc tgggggttca aggtcgaggc cgcggctgac
     2281 ggccgggtcc tggtggacgc caccgatttc gccctgcgtg atgggcacgg agtgatcccc
     2341 gcgctggccc gaaaccgcca ggggacctac cggctcgacc tcagccgcag cgcggtctac
     2401 ctgccgcgca ccaaggcgtt cccccggaac tcggagctgg aggtcacgct gacgtttgcg
     2461 ggagatcaac ccggcgattg ggtgcgggac gtcactccca cgcccggggc gatcacggtc
     2521 cggcagcgac actcgttcat ccagctgccc gacgcgggat acacgccccg cgagttcgat
     2581 ccccgggcgg gttacttcga tttcgcctac gccgactatt cggcgccctt tccggagccg
     2641 gtgaatcggc ggttcatcac ccggcaccgc ctggagaagc gcgatccttc ggcaccgatc
     2701 agcgatccgg tgaagccgat cgtgtactac ctggaccccg gcgtgcctga gccggtgcgc
     2761 accgcgctgt tggacggcgc gcgct
//
LOCUS       DASWKS010000400        14499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2446971, whole genome shotgun sequence.
ACCESSION   DASWKS010000400 DASWKS010000000
VERSION     DASWKS010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14499
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2446971"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VGA78_11335"
     CDS             <1..427
                     /locus_tag="VGA78_11335"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9894510.1"
                     /translation="GEEILTPIGVARTAREGKDLAIITYSAMVWKALEAAERLERDGL
                     SVEVLDLRSLAPLDDEAIVRAVRKTNRVLVAHEDTRTGGVAGEIVARINELCFEWLDA
                     PVRRVCAHDVPLPYAPTLEDFVLPQTDDLVNACRWLAAY"
     gene            458..1831
                     /locus_tag="VGA78_11340"
     CDS             458..1831
                     /locus_tag="VGA78_11340"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX9894511.1"
                     /translation="MAKIDVIMPQMGESIAEGTLSKWLKKSGETVKRDEPIFEISTDK
                     VDAEIPSPSAGVLAEILVNEGQTVAVQTVVARIETDASAAASGPPSTPAAAPPAPPSP
                     PAPPSKAEPHPAPPARPAPVSDPRPQPTPPPQPAGGEVESLEERLRRKSTPLVRKIAA
                     EHNLDIGVIPGTGMAGRVTKNDVLAFLERGAPAAAAAEPPAPRAVPSAAPGVTLIPGP
                     VVEPWPGDRVEPWSKIRKLTADHMIMSRRVSAHVNSVIEVDYTRVAQLRARKKGEYTE
                     RGVNLTFLAFLAKSVADSLRQHPVLNAAVSGESTIFRRDINLGIAVALDWGLIVPVVK
                     RADELSLMGLARAINDLAERARSKRLSPDEVQKGTFTITNPGVFGTWVGLPILNQPQS
                     AILAVGGIEKRPAVVTGPDGSDLIGIRTKGMLALSFDHRIVDGADADRFLAEVRKSLE
                     NFPEGAA"
     gene            1831..2127
                     /locus_tag="VGA78_11345"
     CDS             1831..2127
                     /locus_tag="VGA78_11345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894512.1"
                     /translation="MPRVLLARRTRVTLAAQPIYRRAAAELAARFAGRGQHVWVFRST
                     ADPELLLEFREAKDPAGLEPAAREEAALDARLHAVAEYDTGEPLWEEFPLSEEG"
     gene            2132..2395
                     /locus_tag="VGA78_11350"
     CDS             2132..2395
                     /locus_tag="VGA78_11350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894513.1"
                     /translation="MPKRIIEVDGRRWSVSPSGRRTQYVKDEFGIVFTSEDERREQRI
                     ARYSPLAAKSTELSLSALTDRELSELLSMSQPAWTSPELGYRR"
     gene            2419..3237
                     /locus_tag="VGA78_11355"
     CDS             2419..3237
                     /locus_tag="VGA78_11355"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEX9894514.1"
                     /translation="MHSTASDGVLPPGLVVQRAWEAGLDIIALTDHDTLDGLTEALEA
                     GQRLGVRVICGCEFSVRVAWGEMHLLGYFLPPAHPAIERFLIDARQMRFDRARQMVES
                     LQAWGVAISVDDVLAEAGDASIGRPHVARALVRLGKVPDVATAFDEFLGLGRRAYVEK
                     VLPDLALVADLVHGAGGLVSAAHLRDRANRTTLSRLMLDGLDAVEVRHPRHPPEFTAM
                     LDGLAGSLGLLRTGGTDWHGDERDPACHLGAWAVPVEWVMAMEARVASRESRVW"
     gene            3300..4253
                     /gene="trxB"
                     /locus_tag="VGA78_11360"
     CDS             3300..4253
                     /gene="trxB"
                     /locus_tag="VGA78_11360"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEX9894515.1"
                     /translation="MMAEPFDVIIIGAGPAGLCAALYAGRGMLKTVVLERGIPGGELL
                     NTEKIEDYPGFISILGPDLSERMTEHAKAFGADIRTEYVEAIRREADGTFRVETGSGT
                     VYRGTTVILTAGGTPNRLGVPGEAEFAGRGVSYCAVCDGAFFKGETIAVVGGGDAAVE
                     EAEYLTRYAAKVYVIHRRDQFRASRLLQERLLASPKVEVIWNTTVTEIRGDPQGVKHL
                     ALENTVDGTRSELSVTGIFIFVGFTPNSGLIKEHFAHDPSGYVITDDRMMTSIPGLFA
                     AGDLRVQLTRQITTAVGDATTAAIAVEKYLAGRRSAAPAGV"
     gene            4246..4872
                     /locus_tag="VGA78_11365"
     CDS             4246..4872
                     /locus_tag="VGA78_11365"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9894516.1"
                     /translation="MSDPEIVAIPNGQFLQNCYLIFSPDGEAVLIDPGQEWETFLARI
                     EQRRARLSAIWVTHAHLDHILGVREIHQATGAPIWLHPADRPLYDNLPQQGLWLGVRA
                     GALPPPQHPLSHGQTLRVGQASFEVRHTPGHSPGSVSFVGPGVVLSGDVLFAGSIGRT
                     DLPGGSYETLINSIRSQLLTLDDSTRVLSGHGPETTIGAERLHNPFLV"
     gene            4944..5726
                     /locus_tag="VGA78_11370"
     CDS             4944..5726
                     /locus_tag="VGA78_11370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894517.1"
                     /translation="MTLALTLTLMLGSTAAPSAPGVSADTLRLEVGSTAINGRVYAPH
                     SARVRVQVGPADSKPITEWTNQLTLGDSAGRPIMRWVTRGTRSAPDGSTQTWEILQTY
                     DRETLAPYGYFRTSSTGAFMRLTIEGTRVRGTRRTPPDTAVQLVDLVLQRPGFIASAS
                     DLVPLAAGLKEGAVMTAPVWGPNMTDSEVRIFTVLGRAPIQIEGTEWNAWKVEERRLT
                     DQKLLATWYLVEESPYMVYGEVPLPDGRIQRMTEVAIPHAPR"
     gene            complement(5758..6063)
                     /locus_tag="VGA78_11375"
     CDS             complement(5758..6063)
                     /locus_tag="VGA78_11375"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9894518.1"
                     /translation="MTPAALATFASGRYTKADLARGTRLFLGLNCFEPGQIQAVHTHA
                     DADKFYLVLSGKARIQVADQTVEAGPGDLIWCPAGVPHGIDEAMERTTILVGMSPPP"
     gene            6095..7498
                     /locus_tag="VGA78_11380"
     CDS             6095..7498
                     /locus_tag="VGA78_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEX9894519.1"
                     /translation="MSTRIEKDPLGEKPVPADALYGIQTQRAVENFPISGLGPLPIFV
                     DAVVWIKRSAAQVHKQTGRLDGTVADAIVQAADEVLAGRHRDHFVVDVYQAGAGTSHN
                     MNCNEVLANRANEILGHKRGSYSPVHPNDHVNMAQSTNDVIPTAMRLATLATLPRLLE
                     AMEGLAASLLEKGRQFDHVVKSGRTHLQDATPIRLGQEFAAYGRTVARHREKLLQAAE
                     WLKVMNIGGTAVGTGLNAEPQYPELMVEQLRAVSGLDLRVAEDRVQLMQSMGDIATMS
                     GAVRAYALDLNKIANDIRLLASGPRTGFAEILLPAVQPGSSIMPGKVNPSIAEMVNQV
                     CYQVLGCDTTVALAAEAGQLELNVMMPVITHNAVFAIQILANANRQFDVDCVRGIEAD
                     EKQCAYWLERSPALVTALAPKLGYAEAAKLAKEAVASGLTVRELVVQKQLLQGRELDE
                     VLDLRAMTDLGVPGEGA"
     gene            7631..8080
                     /locus_tag="VGA78_11385"
     CDS             7631..8080
                     /locus_tag="VGA78_11385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX9894520.1"
                     /translation="MRVTTWTEYSLIIVINLAKRRRAGHGALSARELADSERLPADYV
                     EQILLRLRRAGLVDSIRGAKGGYTLAREAERLTVHDVMTASERQTFEINCENHQVDPE
                     RCSSSAACSIRPVWVSLQRRIDRFLESITVADLMQEESKVTEVVALV"
     gene            8198..9328
                     /gene="moeB"
                     /locus_tag="VGA78_11390"
     CDS             8198..9328
                     /gene="moeB"
                     /locus_tag="VGA78_11390"
                     /inference="COORDINATES: protein motif:HMM:NF004281.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HEX9894521.1"
                     /translation="MVLNPNDLIRYARHLTLPEVGLEGQERLRAARVLLVGAGGLGSP
                     AALYLAAAGVGTLGIIDGDRVDLTNLQRQILHGMSTVGHLKTESAAARLTDLNPGVTL
                     ELLPEQLTAANALGIFQRYDLIVDGSDNFPTRYLVNDAAVLTGRPYVYGSIFRFDGQI
                     SIFAAPGGPCYRCLFAEPPAPELVPSCAEAGVLGVLPGIVGSLQALEAIKWSLGSGKS
                     LVGRLVLFNGLELRMRELSVHRDPACAVCGDVPSITAPIDYAAFCGTTAVHDEDAELS
                     PEALSAALGTAEPPQVIDVRDPWEWEVARIAGSRLIPLSRLGDRLADLDPRRDIVTVC
                     HRGVRSMTARRMLRGAGFVRVKSLSGGIDAWAARVDDKLARY"
     gene            complement(9348..9431)
                     /locus_tag="VGA78_11395"
     tRNA            complement(9348..9431)
                     /locus_tag="VGA78_11395"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9395..9397),aa:Leu,seq:cag)
     gene            9526..10017
                     /gene="smpB"
                     /locus_tag="VGA78_11400"
     CDS             9526..10017
                     /gene="smpB"
                     /locus_tag="VGA78_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX9894522.1"
                     /translation="MNQRGVPPAGKRERVTVARNPKATHDFFILETLEAGIVLHGTEV
                     KALRSGKASIKEAWAQVRKGEVWLEGMHITPYEQGNRWNHPPVRTRKLLLHRREIERL
                     VGAVEQQGRTLVPLELYFERGRAKVLIGLAKGKLAHDKRETLRQKIADREMARVVARQ
                     GRE"
     gene            10014..11234
                     /locus_tag="VGA78_11405"
     CDS             10014..11234
                     /locus_tag="VGA78_11405"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX9894523.1"
                     /translation="MIAALLATAILGTAPGSVTIMTPAGERRIPVTTDSGMGQLIPAG
                     LTLTALGGTSSSDGVWAEVRVGPTPFRFLLGARVYTVADKLFALASTATVRGDSLFLP
                     LQFLTDALPRHLSSRFRWDPITARLVDAGEPRPPVTGTRVVSAGANAATEPTGGLFRK
                     VHRVTIDPGHGGVDPGNPGLYFPSGIKEKHVTLEMGLLVRQELKARGVQVTMTRSRDT
                     LIDLRDRGRYCAVDCDLFVSLHVNSLPRRGGYNAVRGFETYFLAEARTEDAARVARME
                     NEAVRFDQNQEENQGAGGLDFILKDLQLNEYLRESARAAELVQRQLGDVHSGGDRGIK
                     QAGLIVLNTARRPAILVEVGFSTNRADARLMTQTASQKRLAKAIAEAIIQYLVEYERK
                     TQDSPLGPGSGGRE"
     gene            11227..12105
                     /locus_tag="VGA78_11410"
     CDS             11227..12105
                     /locus_tag="VGA78_11410"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005574.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEX9894524.1"
                     /translation="MNSPDRTGNFGTTVLGIHFQNPVLLASGTAGFGRELEGVIDLDR
                     LGGLVTKAVSVEPRRGNPPPRVGEFPGGMINSVGLANPGLAAVKQSELPWLGLRLSRT
                     QVLVNVVGFTEEEYAEVVGGLDGLSGFAAYELNLSCPNTARGGMEFGADPECVTRIVR
                     RARAVTRRPLFVKLSPVLPDIAGMAVTARDAGADGVTLVNTMPGLVYREGRPRLGQGS
                     GGVSGPALFPVGLLAVRRVVEKTEGTFPVIGVGGIRTAGDARQYFQVGAQLIQIGTAA
                     LADPRVPERIVRELRS"
     gene            12102..12800
                     /gene="pyrF"
                     /locus_tag="VGA78_11415"
     CDS             12102..12800
                     /gene="pyrF"
                     /locus_tag="VGA78_11415"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEX9894525.1"
                     /translation="MSRATPHPEIILALDVPDGASALRLLDLISEVRWVKVGSLLYVT
                     EGPDLVHRLVERGLSVFLDLKWHDIPNTVRGAVTAALGLGVRMATVHALGGLEMMTAA
                     AEAAGRDMDIVGVTVLTSHTPASFGQATGRTDVDLLSDAIRLGRNALQAGLAGVVCSP
                     REAQPLRQELGTAPLIVVPGIRRGSEPADDQSRTATPRDAAQAGASHLVIGRPVLQAA
                     DPAQVWAELAAELR"
     gene            12800..13210
                     /locus_tag="VGA78_11420"
     CDS             12800..13210
                     /locus_tag="VGA78_11420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894526.1"
                     /translation="MKTLLLLVLLALPAESFAQQPLSEVAKAAREAVLRGDLGSLVSR
                     SRGLKLRLPGAEPSSALGPAHATATLRDHFRRGETAEVTVEDFREVGGGLAFVELRRE
                     YRVPGSPERRSQLILLSYRQTRGAGWQLVEVRAN"
     gene            13267..>14499
                     /locus_tag="VGA78_11425"
     CDS             13267..>14499
                     /locus_tag="VGA78_11425"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894527.1"
                     /translation="MIVSWLARLSRALRALIRPGRSERDLDEELRFHLDMDAADWARR
                     GVPPSHARQAARRAFGPLSPIKEQIRELRLTSPLEHFGRDVRGALRGIRRAPGFALAV
                     IVTLAMGIAAVTTMFSITSGILRELPVEAPDRLVHLAGIDRLRRDEGGRLLAWELLAL
                     AGQQRTLETLAAYDDETFHLGDASRFAQRWSGAVITPGVFEVLRVRPALGRTVTVEDG
                     RPGAPPVVILGHTLWTRRYDADPTIVGREIRVNGLPRTVIGVMPDGFRFPVEQDLWTP
                     FAPSASAAPGEGTGWTVFGRLRDGRSLDEARVEFQSLAARLAAASPATHAERTVQARS
                     YRDELVPPRARMIFRVMLLVVSFVLLVACANAANLLLTRAMARRHEVAVRSALGGARY
                     RILTQLLTEVLVLAAIAGL"
BASE COUNT         2326 a         4794 c         4953 g         2426 t
ORIGIN      
        1 cggtgaggag atcctgacgc cgatcggcgt ggcccggacg gcgcgggaag ggaaggacct
       61 cgcgatcatc acctactcgg ccatggtgtg gaaggcgctc gaggccgccg agcggctgga
      121 gcgggacggg ctctccgtcg aggtgctcga cctgcggagc ctggctcccc tggatgacga
      181 ggcgatcgtc agggcggtac gaaagaccaa ccgggtcctg gtcgcgcatg aggatacccg
      241 gaccggcggc gtcgccggtg agatcgtggc ccgaatcaac gaactgtgct tcgagtggct
      301 ggacgcgccg gtgcgccggg tgtgtgctca cgatgttccg ctgccttacg ccccgacgct
      361 ggaagatttc gtcctgccgc agacggatga tctggtgaac gcgtgtcggt ggctggcggc
      421 atactgaccg actgaccgac cgcttgagga gctgtggatg gcaaagatcg acgtcatcat
      481 gccccagatg ggcgagtcca tcgccgaggg gaccctctcg aagtggctga agaagtcggg
      541 cgagaccgtg aaacgggacg agcccatctt cgagatctcg actgataaag tcgacgcgga
      601 gatcccttcg ccctcggccg gcgtgctggc cgagatcctg gtgaacgaag ggcagaccgt
      661 ggcggtgcag acggtagtgg cccggatcga gaccgacgcc tccgcggcgg catccggccc
      721 gccctccact cccgcggccg cgccgccggc cccgccctct ccgccggccc cgccctccaa
      781 ggcggagccc cacccggccc cgccggcgcg gcccgcgccc gtatcggatc cccgtcccca
      841 gccgacccca ccgccccagc cggccggcgg cgaggtcgaa tcgctggaag agcggctgcg
      901 gcgcaaatcg acgcccctgg ttcgcaagat cgccgccgaa cacaatctgg atatcggggt
      961 gatcccgggg accggaatgg cgggccgggt caccaagaac gatgtgctgg cgttcctcga
     1021 acggggcgcg ccggccgctg cggcggcgga gccccctgct cctcgagccg tcccgtccgc
     1081 cgccccgggg gtcaccctga ttccggggcc ggtggtggag ccgtggccgg gcgatcgggt
     1141 ggagccctgg tccaagatcc gcaagctcac ggccgaccat atgatcatgt cgcggcgggt
     1201 ctcggcccac gtgaacagcg tcatcgaggt cgactacacc cgggtggcgc agctgcgcgc
     1261 cagaaaaaag ggcgagtaca ccgagcgggg cgtgaacctc accttcctcg ccttcctcgc
     1321 gaagtcggtg gccgacagtc tgcgccagca tccggtgctc aacgccgcgg tctcgggaga
     1381 gagcaccatc ttccggcgcg acatcaacct gggcatcgcg gtggcgctcg attggggcct
     1441 gatcgtgccg gtcgtgaagc gggcggacga gctgtcgctg atgggcctcg cccgcgcgat
     1501 caacgatctg gccgagcggg ctcgcagcaa gcggttgagc ccggacgagg tgcagaaggg
     1561 caccttcacc atcaccaatc cgggggtatt cggaacctgg gttggcctgc cgatcctcaa
     1621 ccagccgcaa tcggccatcc tggctgtggg tggcatcgaa aagcgcccgg ccgtggtgac
     1681 cgggcccgac ggctccgacc tgatcggcat ccgcaccaag gggatgctgg cgctgtcctt
     1741 cgatcatcgg atcgtggatg gggccgacgc ggatcgcttt ctggcggagg tgcgcaaatc
     1801 gctcgagaac ttccccgaag gcgccgcctg atgccgcggg tgctgctcgc ccggcggacc
     1861 cgggtgaccc tggcggctca gccgatctat cgccgcgccg ccgccgagct cgcggcccga
     1921 ttcgccggcc ggggccaaca cgtctgggtc tttcggagca ccgccgatcc cgaactgctg
     1981 ctcgagttcc gggaagcaaa ggacccggcc ggactcgagc ccgccgctcg cgaggaggcc
     2041 gcgctggacg cgcggcttca cgcggtggcg gagtacgaca ctggggagcc gctctgggag
     2101 gagttccccc tgagcgagga gggctgaccc aatgcccaaa cggatcatcg aggtcgacgg
     2161 gcgccgctgg agcgtgtctc ccagcggccg ccggacccaa tacgtgaagg acgagttcgg
     2221 catcgtgttc accagcgagg acgagcgccg ggagcagcgg atcgcgcgct attccccgct
     2281 ggccgccaag agcactgagc tgtcgctctc ggccctcacc gatcgcgagc tttccgagct
     2341 cctgtccatg tcgcagccgg cctggacctc acccgagctg ggataccgtc gctgagcccg
     2401 cgccgcgccg atcttcacgt gcattcgacc gcgtccgacg gcgtcctgcc gcccggcctc
     2461 gtggtccagc gcgcctggga ggcggggctg gacatcatcg cgctcaccga ccacgacacc
     2521 ctcgacggac tgaccgaggc cctggaagcc ggccagcggc tgggggtgcg cgtcatctgc
     2581 gggtgcgaat tctcggtgcg ggtggcctgg ggcgaaatgc acctgctggg ctactttctg
     2641 ccgccggctc atcccgccat cgagcggttt ctgatcgatg cgcggcagat gcggttcgat
     2701 cgggcccgac agatggtgga gagcctccag gcctggggcg tcgccatcag cgtcgacgac
     2761 gtgctggcgg aggcgggcga tgcctcgatc ggccggccgc acgtagcgcg tgcgctggtc
     2821 cgactgggga aggtgccgga tgtcgcgacc gcgttcgatg agttcctggg gctggggcgg
     2881 cgggcctacg tcgagaaagt gcttcccgac ctcgccctgg tggccgacct ggtgcatggc
     2941 gcgggcgggc tggtgtcggc cgcgcacctg cgcgaccggg ccaatcggac taccctgtcg
     3001 cgcctgatgc tggatggact ggacgccgtg gaagtgcggc acccccgcca tccgcccgag
     3061 ttcaccgcca tgctcgacgg gctggctggt tccctgggac tgctccgcac cggcggcacc
     3121 gactggcacg gcgacgagcg tgatcccgcc tgtcacctgg gggcgtgggc cgtgccggtg
     3181 gagtgggtga tggccatgga ggcgcgggtc gcgagtcgcg agtcgcgcgt ctggtgagga
     3241 accattgcgc tccgggaggc gttgtacttc gatgaactcg tgcctcgcga ctcgagacca
     3301 tgatggctga acccttcgac gtgatcatca tcggtgccgg cccggccggc ctgtgcgcgg
     3361 cgctctacgc cgggcgcggc atgctcaaga ccgtggtgtt ggagcgcggg atccccggcg
     3421 gcgagctgct caacaccgag aagatcgagg actatcccgg gttcatcagt attctcggcc
     3481 ccgacctgtc ggagcggatg accgagcacg ccaaggcctt cggggccgac atccggaccg
     3541 agtacgtcga ggccatccgg cgcgaagccg atggcacctt ccgggtcgag accggttccg
     3601 gtacggtcta ccgcggcact accgtcatcc tcaccgcggg cggcaccccc aaccggctgg
     3661 gtgtcccggg cgaagccgaa ttcgcgggtc ggggcgtgtc ctactgcgcg gtctgtgacg
     3721 gggccttctt caagggcgag accattgcag tggtgggcgg cggcgacgcc gccgtagagg
     3781 aagccgagta cctgacccgc tatgcggcca aggtgtacgt catccaccgg cgcgaccagt
     3841 tccgggcctc ccggctgctg caggagcggc tgctggcgag ccccaaggtg gaagtcatct
     3901 ggaacaccac cgtgaccgag atccggggcg acccccaggg agtcaagcat ctggcgctgg
     3961 agaacacggt ggacggcacg cgctcggagc tgtccgtcac cggcatcttc atcttcgtcg
     4021 ggttcacgcc taacagcggc ctgatcaaag aacactttgc ccacgacccg agcggatacg
     4081 tcatcaccga tgaccggatg atgacctcca ttccgggatt gttcgcggcc ggggacctcc
     4141 gggtccagct gacccggcag atcaccaccg cggtggggga cgcgaccacc gccgccatcg
     4201 cggtggagaa gtacctggcc ggacgccgca gcgccgcgcc tgcgggtgtc tgacccggag
     4261 atcgtcgcca tccctaacgg gcagttcctc cagaactgct atctgatctt ctcgcccgat
     4321 ggtgaagccg tcctgatcga tccgggccag gaatgggaaa ccttcctcgc ccgaatcgag
     4381 cagcgccggg ctcgactgag cgccatctgg gtcacccacg cgcacctcga ccacatcctg
     4441 ggcgtgcgag aaatccacca ggcgaccggg gcgcccatct ggcttcaccc ggccgaccgg
     4501 ccgctctacg acaatctgcc ccagcagggc ctgtggctcg gggtcagggc gggcgcgctt
     4561 ccgcccccgc agcacccgct gagccatggt cagacgctgc gggtgggcca agccagtttc
     4621 gaagtgcggc acacgccggg gcactcgccc ggcagcgtca gcttcgtcgg gccgggcgtg
     4681 gtgctttcgg gcgacgtgct gtttgcggga tcgatcggcc ggaccgatct cccgggcggc
     4741 agctacgaga cactgatcaa cagcatccgg tctcagctgc tgacattgga cgacagcacc
     4801 agggttctct caggtcacgg gcccgagacg accatcgggg ccgagcggct ccacaatccc
     4861 tttctggtct aggccctccg gggcgaatcc ttccctcatc gtggccgtag gttgttgata
     4921 ccctcctcgc tggagctgtc gccatgaccc tggctctgac cctgaccctg atgctgggga
     4981 gcaccgccgc tccgtcggct ccgggtgttt cggctgacac gctgcggctc gaggtcggct
     5041 ccaccgccat caacggccga gtctacgcgc cccattccgc ccgggtcagg gtccaggtcg
     5101 gtccggccga cagcaagccg atcacggaat ggaccaacca gctgacgctg ggtgactccg
     5161 ccgggcgtcc catcatgcga tgggtcactc ggggtacccg atccgccccc gatggttcca
     5221 cccagacctg ggagattctc cagacctacg atcgggaaac cctggctcca tacggctact
     5281 tccgcacctc gagcaccggt gctttcatgc ggctcaccat cgagggaacc cgggtgcgcg
     5341 gtacccggcg aacaccgccc gataccgcgg ttcagctggt cgatctcgtc ctgcagcgac
     5401 ccggcttcat cgcttcggct tccgacctgg tcccgctggc ggccggactc aaggagggcg
     5461 cggtcatgac cgcaccggtc tgggggccga acatgaccga ttccgaggtg cggatcttca
     5521 cggtgctggg tcgggccccg atccagatcg aagggaccga atggaacgcc tggaaggtcg
     5581 aagagcggcg actcaccgac cagaagctcc tggcgacttg gtacctggtg gaagagtcgc
     5641 cctacatggt ctacggtgag gttccgcttc cggacgggcg gatccagcgc atgaccgagg
     5701 tggccattcc tcacgcgccg cggtgatgtc cctccgaggg ctgccgcact cttcgtgtca
     5761 gggtgggggg gacatgccca ccagaatcgt ggtgcgttcc atcgcctcgt cgatgccgtg
     5821 cggcaccccg gcggggcacc agatcagatc gcccgggccg gcttcgaccg tctggtcggc
     5881 cacttggatc ctcgcctttc cggagaggac caggtagaat ttgtccgcgt ccgcatgtgt
     5941 atgtaccgct tggatttgcc ccggctcgaa gcaattgagg ccgaggaaca accgggttcc
     6001 gcgcgccagg tcggccttgg tgtagcgccc ggatgcgaac gtcgccagcg ctgcgggcgt
     6061 cacgaagtac tccgccaccg ttcacccctg tgatatgtct actcgcatag aaaaggaccc
     6121 gctcggcgag aaaccggtgc cggcggatgc gttatatggc atccagaccc agcgagcggt
     6181 ggagaatttt ccgatctccg ggctcggtcc gctgccgatc ttcgtcgacg ccgtcgtctg
     6241 gatcaagcga tcggccgccc aggtccacaa acagaccggc cgactggatg ggaccgtggc
     6301 cgacgccatc gtgcaggccg ccgacgaggt gctggccggc cgccatcgcg atcacttcgt
     6361 ggtggacgtc taccaggcgg gcgcgggcac cagccacaac atgaactgca atgaggtgct
     6421 cgccaatcgg gccaacgaga tcctgggtca caagcggggc tcctacagcc cggtgcatcc
     6481 caacgatcac gtgaacatgg cacagagcac caacgacgtc atccccaccg ccatgcggct
     6541 ggccacgctc gcgacgttac cccggttgct ggaggcgatg gagggactgg ccgcatcgct
     6601 cctcgaaaag ggccggcagt tcgatcatgt cgtcaagtcg ggccgcaccc acctgcagga
     6661 tgccacgccc attcgcctgg gtcaggagtt cgcggcttac ggccgcaccg tcgcacggca
     6721 tcgggaaaag ctgcttcagg ccgccgagtg gctcaaggtg atgaacatcg ggggaaccgc
     6781 ggtcggcacc ggcctgaatg ccgagcctca gtatcccgaa ctcatggtgg agcagttgcg
     6841 ggcggtgagc ggactggacc tccgggtggc ggaagaccgg gtccagctga tgcagtccat
     6901 gggcgacatc gccaccatga gcggcgcggt gcgggcctac gcgctggatc tgaacaagat
     6961 tgccaacgat atccgcctgc tcgcatccgg tccccgcacc ggcttcgccg aaatcctcct
     7021 gccggcggtc cagccgggct ccagcatcat gcccggcaag gtcaatcctt ccatcgccga
     7081 aatggtgaat caggtgtgct accaggtgct gggctgtgac acgacagtgg ccctggcggc
     7141 ggaagccggc cagctcgagc tcaacgtgat gatgccggtc atcacccaca acgcggtgtt
     7201 cgccatccag atcctggcca atgcaaaccg gcaattcgac gtcgactgcg tgcgtgggat
     7261 cgaggccgac gagaagcagt gcgcctactg gctggagcgc agtcccgccc tggtgacggc
     7321 gctcgcgccc aagctcggct atgccgaagc cgccaagctc gccaaagagg cggtggcgag
     7381 cgggctcacg gtcagggagc tggtcgtgca gaagcagttg ttgcagggcc gggagctgga
     7441 tgaggtgctg gacctgcggg ccatgaccga cctgggggtg ccgggggaag gagcgtaact
     7501 accggtcgaa gatcgtcgaa ggcggtcgaa aaacacgcac agaacagttt tgcgactcta
     7561 agcatcgctt catattagct taatcctaaa ttagcacgaa tatgctaggc gatagcctat
     7621 attcggtgcc atgcgcgtaa caacctggac cgaatacagc ctcatcatcg tgatcaacct
     7681 ggccaagcgc cgccgtgcgg gccacggggc actgtcggcc cgcgaactgg cggactcgga
     7741 gcgactcccg gccgactacg tcgaacagat cctgctgcgg ctgcgtcggg ccggtctggt
     7801 cgacagcatt cgcggcgcta agggcggcta caccctggcc cgcgaggccg agcggctcac
     7861 cgtccacgac gtgatgacgg cttcggagcg gcagaccttc gagatcaact gtgagaacca
     7921 ccaggtcgac cccgagcgct gctcctcgtc cgcggcctgc tctatccggc cggtgtgggt
     7981 ctcgttgcag cgacggatcg atcggtttct tgagagcatc accgttgcgg atctcatgca
     8041 ggaagagagc aaggtcacgg aggttgtcgc gctcgtctga cgtctgacgg gcggacggac
     8101 tgacggacgg acggaaagcc tcgacaagcc ggcccctcgg atacgggccg gcttcgttac
     8161 ttcccgcccg cccgcccgcc cgcctaatat tcgagtcatg gtactgaacc ccaatgacct
     8221 cattcgctac gctcgtcatc tgacgctgcc cgaagtcggg ctcgaggggc aggaacgttt
     8281 gcgtgccgcg cgagtgctgc tggttggcgc gggtggactt gggagccccg ccgcgctcta
     8341 cctcgccgcg gccggcgtcg gaaccctggg gatcatcgac ggcgaccggg tcgatctcac
     8401 caatctccag cggcagatcc tgcatggcat gtccaccgtc ggacacctga agaccgaatc
     8461 cgccgctgcg cggctcaccg acctgaatcc cggagtaacc ctcgagctgc tgccggaaca
     8521 gctcaccgcc gccaacgccc tcgggatttt tcagcggtac gatctcatcg tcgacggcag
     8581 tgacaatttc ccgacccggt acctggtcaa cgatgcggct gttctcaccg ggcgccccta
     8641 cgtctatggc agcatcttcc gcttcgacgg tcagatctcc atcttcgccg ctcccggcgg
     8701 tccctgctat cgctgcctct tcgccgagcc tccggccccg gagctggtac cgagttgcgc
     8761 ggaggctggt gtcctgggcg ttctgcctgg catcgtgggc tcactccagg cgctcgaagc
     8821 catcaagtgg tcgctgggct cggggaaatc gctggtgggc cggctggttt tgtttaacgg
     8881 actggaactt cgcatgcgcg agctctcggt tcaccgtgat cccgcgtgtg ctgtgtgcgg
     8941 cgatgtgccg agcatcacgg cgccgatcga ctacgccgcc ttctgcggca ccacggctgt
     9001 tcatgacgag gacgcggagc tgtcacccga agcactttcg gccgcgctcg gcacagccga
     9061 gcctccccag gtgatcgatg tgcgtgatcc ctgggagtgg gaggtcgcgc gaatcgcggg
     9121 aagccggctc attccactgt ccaggctggg tgacaggctg gcggacctcg accccagacg
     9181 ggacattgtc acggtttgtc atcggggtgt ccggtccatg accgcccggc gaatgctccg
     9241 cggcgccggg ttcgtccggg tcaagagcct gtccggcggc atcgacgcct gggctgcccg
     9301 ggtcgatgac aagctggcaa ggtattaggg tttactgcgg ttggaagtgc cgaaggtggg
     9361 actcgaaccc acacgggctt gcgcccacgg cgccctgaac gccgcgcgtc taccaattcc
     9421 accactccgg caggcgggcc aaacctaagg actcttccag gggtctgcaa gcgtagcgtt
     9481 gcccatccac cacacccggc ctatcttttg ctgtatgatg gacttatgaa ccagcgcggc
     9541 gtcccacccg ccggcaagcg ggagcgggtt acggtcgccc gcaatcccaa ggctacccac
     9601 gacttcttca tcctggagac gctggaggcc ggtatcgtgc tgcatggcac cgaggtgaag
     9661 gccctgcggt ccggaaaagc gtctatcaag gaagcctggg ctcaggtccg caagggcgag
     9721 gtctggctgg aagggatgca catcactccc tacgagcagg gcaatcgttg gaaccaccct
     9781 ccggtgcgga cccgcaagct gctgctgcac cggcgcgaga tcgagcgcct ggtcggggcg
     9841 gtcgagcagc agggacgaac cctggttccg ttggagctgt atttcgagcg gggaagagcc
     9901 aaggtcctga tcgggcttgc caaaggcaag ctggcgcatg acaaacgtga gacactcaga
     9961 cagaagatcg ccgaccggga gatggcgcgg gtggtagcca gacagggtcg cgaatgatcg
    10021 ccgcgctcct tgcgaccgcg attctcggta ccgcgccggg cagcgtcacc atcatgacac
    10081 cggcggggga acgccgcatc ccggtcacca ccgactcggg gatggggcag ctgattcctg
    10141 ccgggctcac cctcaccgct ttggggggca ccagctcctc cgatggggta tgggccgaag
    10201 tacgagtcgg gcccacgccg tttcgcttcc tgctcggtgc ccgggtctac actgtggcgg
    10261 acaagctctt cgcactggcc tccaccgcga cggtgcgggg tgacagtctc tttctgccgc
    10321 tccaattcct gaccgacgcg ctgccccgtc acctgagctc gagattccgt tgggatccga
    10381 tcaccgcccg cctggtcgat gccggcgagc ccaggccgcc ggtcacaggc acccgggtgg
    10441 tgtcggccgg tgccaacgct gccactgagc cgaccggcgg gctcttccgg aaagtccatc
    10501 gggtcacgat cgacccgggt catggcgggg tcgatcccgg caaccccggg ctctatttcc
    10561 cgagcgggat caaggaaaag cacgtgacac tggagatggg gcttctggtc cggcaggaat
    10621 tgaaggccag gggtgtgcag gtgacgatga cccgctctcg cgataccctc atcgacctgc
    10681 gtgaccgagg ccggtactgc gccgtcgact gcgatctgtt cgtgagtctg cacgtgaatt
    10741 ctctgccgcg gcggggcgga tacaacgcgg tgcggggttt cgagacctat ttcctggccg
    10801 aggcgcggac cgaggacgcg gcccgggtcg cccggatgga aaacgaagcg gtccggttcg
    10861 atcagaacca ggaagagaac cagggcgccg gcgggctcga cttcatcctc aaggacctgc
    10921 agctgaacga gtacctgcgc gagtcggccc gtgcagccga gctggtgcag cggcaactgg
    10981 gcgacgtgca ttccggcggg gatcgcggga tcaagcaggc cggcctcatc gtgctgaaca
    11041 ccgctcgccg gcccgccatt ctggtggaag tcggcttcag caccaaccgc gccgacgctc
    11101 ggctgatgac ccagaccgcc tcacagaaac ggctggccaa ggcgatcgcc gaagcgatca
    11161 tccagtatct ggtggaatac gagcgcaaga cccaggactc tccgctgggc ccggggtccg
    11221 ggggccgtga atagtccgga ccgcaccggg aacttcggca ccaccgttct cggcatccat
    11281 tttcagaatc ccgtcttact cgcctcgggg accgccggct tcggccggga gctcgagggc
    11341 gtgatcgacc tcgaccgcct gggcggcttg gtgaccaagg cggtttcggt cgagccgcgc
    11401 cgaggaaatc ctccgccccg ggtgggcgaa ttcccgggtg ggatgatcaa ctcggtcggg
    11461 ctggccaatc ccgggctggc agccgtcaag cagagcgagc taccgtggct gggcctccgg
    11521 ctctcccgca cccaggtgct ggtgaacgtg gtcggtttca ccgaggagga atacgccgag
    11581 gtggtgggcg ggctggacgg gctcagcggt ttcgccgcct acgagctcaa cctctcctgt
    11641 cccaacacgg cccgcggagg aatggaattc ggcgccgatc ccgagtgcgt gacccgcatc
    11701 gtgcgacggg ctcgcgccgt caccaggcgt cccctcttcg tcaagctgtc gccggtcctg
    11761 cccgatatcg ccggcatggc cgtaaccgcc cgcgacgcgg gcgcggacgg agtcacgctg
    11821 gtgaacacga tgcccggtct ggtgtatcga gaagggcgcc cgcgcctggg gcagggaagc
    11881 ggcggggtca gcggaccggc cctgttcccg gttggactcc tggcggtgcg gcgggtggtg
    11941 gagaaaaccg agggtacctt ccctgtcatc ggagtaggcg ggatccgcac cgccggtgat
    12001 gccagacagt atttccaggt gggagcccag ctgatccaga tcgggacggc ggcgctggct
    12061 gatccgcggg ttccagaacg gatagtcagg gagctgcggt catgagtcga gcgacgccgc
    12121 acccggaaat catcctcgcg ctcgatgttc ccgacggagc gtccgctctg cggctgctgg
    12181 atctgatctc ggaggtccgg tgggtgaagg tcggttctct cctttatgtg acggagggcc
    12241 cggacctggt gcaccggctg gtggagcggg gcttgtcggt cttcctggat ctcaaatggc
    12301 acgatatccc taatacggtg cggggggcgg tgaccgccgc gctcggcttg ggggtccgga
    12361 tggccacggt ccacgccttg ggcgggctcg agatgatgac ggccgcggcc gaagcggccg
    12421 gccgggatat ggacatcgtg ggtgtgactg tcctcaccag ccacactccg gcgtccttcg
    12481 ggcaggccac cggccggacc gacgttgatt tgttgtccga cgctatcagg ttaggtcgca
    12541 atgccttgca ggccggactg gcgggcgtgg tgtgctcgcc ccgggaggca cagcctctgc
    12601 gtcaggagtt ggggacggcg ccattgattg tggtacccgg gattcggcgc ggcagtgagc
    12661 cggcggatga tcagagccgg accgcaacac cccgggatgc ggctcaggcc ggtgcgagcc
    12721 atctggtgat tggtcgaccg gtcctgcagg cggcggatcc ggcccaggtc tgggccgagc
    12781 tggcagccga actgcgatga tgaagactct gctcctgctg gtcttgctgg ccctgccggc
    12841 agaatccttc gctcagcagc ccctgtccga agtggcgaag gctgcgcggg aagcggtgct
    12901 gcggggcgac ctcggttccc tggtttcccg cagccgcgga ctcaagctgc gcttgcccgg
    12961 ggcggagccg tcctcggcgc tggggcccgc ccacgccacc gccacgctaa gagaccattt
    13021 tcgccggggc gagaccgcgg aggtgacggt ggaagatttc cgggaagtgg gaggcgggct
    13081 ggccttcgtc gaattgcggc gggaataccg agtccccggc agtccggaac gccgttcgca
    13141 gctcattctt ctcagttacc gacagacccg cggagcggga tggcagttgg tggaagtgcg
    13201 agccaactag ggctcttctc ttgtcgacag tcgacatgag agcgatattg ccggcaggag
    13261 gtcggcatga tcgtcagttg gctcgctcgc ctgtcccgcg ccttgcgcgc cctcatccgc
    13321 cccggacgtt cggagcgcga tctcgatgag gagctccgtt tccacctgga catggatgcc
    13381 gccgactggg ctcgccgcgg ggtcccgcct tcccacgctc ggcaagccgc tcggcgggcg
    13441 ttcggtcccc tttccccgat caaggaacag atccgcgagc tgcggctgac cagcccgctg
    13501 gagcatttcg ggcgcgatgt ccggggtgcg cttcgcggta tccggcgcgc cccgggcttc
    13561 gcgctggcgg tcatcgtcac ccttgcgatg gggatcgcag ccgtcaccac catgttctcg
    13621 atcaccagcg ggatcctccg cgagcttccg gtcgaagccc cggaccggct ggttcacttg
    13681 gcggggatcg atcggctgcg aagggacgag ggcggccgcc tcctggcctg ggagctgctg
    13741 gccctggcgg gccagcaacg cactctggaa acgttggccg cctacgacga tgaaacattt
    13801 cacctgggcg acgccagccg attcgctcag cgctggtccg gcgcggtcat cacgcccggg
    13861 gttttcgagg tcctgcgggt gcggcccgcg ttgggacgga ccgtcactgt ggaggatggc
    13921 cgacccggcg ccccaccggt ggtcatcctg ggtcataccc tctggacccg gcgctatgac
    13981 gccgatccca cgatcgtggg tcgcgagatc cgggtgaacg gcttgccccg aaccgtgatc
    14041 ggggtgatgc cggatggatt ccgctttccg gtcgagcagg acctgtggac tcccttcgca
    14101 ccatcagcca gcgcggcgcc gggcgaggga accggatgga cggtgttcgg ccgcttgcgg
    14161 gatggccggt ccctggatga ggcacgggtc gagttccagt cgctggcggc gcgcctcgcc
    14221 gcggcatctc ctgccacaca cgcggaacga acggtacagg ctcggagcta tcgcgacgag
    14281 ctggtgccgc cccgggcgcg catgatcttt cgggtgatgc tgctggtggt gtcgttcgtg
    14341 ttgctggtgg cctgtgccaa cgcggccaac ctgctgctca cccgagccat ggcgcggcgc
    14401 cacgaagtgg cggtccggtc tgccctgggc ggcgcgcggt accgcatcct gactcagctc
    14461 ctgaccgaag tgctggtgct ggcggcgatc gccggcctg
//
LOCUS       DASWKS010000401         6660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2447675, whole genome shotgun sequence.
ACCESSION   DASWKS010000401 DASWKS010000000
VERSION     DASWKS010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2447675"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /gene="thiL"
                     /locus_tag="VGA78_11430"
     CDS             <1..801
                     /gene="thiL"
                     /locus_tag="VGA78_11430"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEX9894528.1"
                     /translation="FRRDWISLEETGWRAATAALSDLAAAGARCVGVLAAVTAPRSSS
                     VDEVTSMLEGVGTAVAAGGGVVLGGDLGASDRWAIAVTVFGRAAHPMSRRGARPGDMV
                     WVTGSLGGARAATTAWLNRRIPEPYARSAFAHPTARLAAGRWLAGHGATAMIDLSDGL
                     AGDAAHLAVASGVAIHIELERLPVLPEVWPEAKAAGEEPEVFAARGGEDYELLACLPP
                     SFTLDDAARCLVDTGTRLSRVGRMGDGTGVRLTLVGRPVLIQGYDHFG"
     gene            798..1508
                     /locus_tag="VGA78_11435"
     CDS             798..1508
                     /locus_tag="VGA78_11435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9894529.1"
                     /translation="MINPLRFSLGAVWATLVWGTRAIRTARRGVPDTPGGPYDEAALG
                     WSRGLLRAARITVRIEGPARLRPRPVVYVSNHISMIDIPVLVTALPVVPKFVMKKELL
                     RVPLFGAAAKAAGHIVIDRRNQGAAFAAYDAAAEIIRRGHPALVFAEGTRSRDGRLMP
                     FKKGPFVLAIAAQVPVVPVVVLGSYELMPRLSLAPKPGEVVLRVGEDIPTAGLDYEDR
                     NALSQQARAAMKALGAVE"
     gene            1693..2973
                     /gene="eno"
                     /locus_tag="VGA78_11440"
     CDS             1693..2973
                     /gene="eno"
                     /locus_tag="VGA78_11440"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX9894530.1"
                     /translation="MSTIIEVHGREIIDSRGNPTVEAEVVLASGARGRAAVPSGASTG
                     EHEAVELRDQDSKRFGGKGVLEAVKNVNEVLGPRLEGIDAADQIAVDAEMMEADGTSN
                     KSKLGANALLAVSLAVARAAAEETGLPLYRYLGGPMSRILPVPLMNILNGGVHASNNV
                     DAQEFMVVPIGADTFADALRMGIETFHALKSVLGKMGLSTAVGDEGGFAPQLPSNEAA
                     LDVLMQAIKNAGYEPGTEMAIALDVAASELYQDGEYVFKKGDGSRRTAEQMVDLYAGW
                     VERYPIVSIEDGLAEDDWPGWTRLTERLGDRIQLVGDDLFVTDVDRLGRGIDEGVGNA
                     VLVKVNQIGTLTETLQCIELAKGSAYGVIISHRSGETEDTFIADLAVATGAGQIKTGS
                     ASRTDRVAKYNQLLRIAEELGELGHYPGRDLYRL"
     gene            2970..3260
                     /locus_tag="VGA78_11445"
     CDS             2970..3260
                     /locus_tag="VGA78_11445"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEX9894531.1"
                     /translation="MTARRLVVALLALALLFALQGGEYSTWDFFTLKRQQREERIRIA
                     ELEQEVDSLEREAIAVETDPEVQERLARELYGMLRPGEFVYNILWEESGRKD"
     gene            complement(3330..3902)
                     /locus_tag="VGA78_11450"
     CDS             complement(3330..3902)
                     /locus_tag="VGA78_11450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894532.1"
                     /translation="MRGWREGARLVLGVALCACATSDVVSGPGNMNPAKGGNAGRNGG
                     DALVVDIVSDDFQGDNLVQSTCAGDSQASYLIRFGDTDQGTNQGCLVVTTSSGAQLVD
                     GIEFTVGVRSGAVTKIQIWGHDAAGPSGIYHNSDPIPIVPGVPVSPEGFRVHVHATDV
                     PVWRMNGHLSTKRVAQVGTVDIGDLVYRLP"
     gene            4014..6470
                     /locus_tag="VGA78_11455"
     CDS             4014..6470
                     /locus_tag="VGA78_11455"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9894533.1"
                     /translation="MIHFRLLGSLELRSAEGRELPSLLSQPKRLALLAYLAAAAGEGH
                     CRRDALLALFWPDLDTGRARHALNQALYVLRQVLGKDILLLRGEEEVGVNRLGMWCDV
                     RGFDDLARDGQFEAALALYRGELLSGFHVDGCPEFERWMDGTRAELARRAKQAALLLE
                     KRARDTRNLAGQAHWLREALRLDPWDEGVVGRLLVVLGALGDRAGGLREFDAFRHRLR
                     NEFEMEPSAALGDAADRLRRDSSPVSDPAPAPAALMPSTLPGTRRRQARVVITGLALA
                     LLGGGVITLVGRKPSAPAPTRPRRVVVVAFDNLTSDSGLAQLARLAGDQIAAGLAHSG
                     LVEVIPASVAWRGPGQPLIREAEQGLVVRGSVTRAADQVLLRSEIVDASRGRLVRSIT
                     ETAPEAQPLPGVAALRDQVLGALATVVDPRFNTWIGTASQPPSLNAYQLYVDGLELLM
                     RSQWSAATAVLEAAARLDNGFVSPLLWALYARIASGAYPAADSLSTALEARRATLAVW
                     DRAMLDFLRSRLVGDQVDAYYAIRRAAAVMPTSEWLYLWGAQALLVNRPQEAVDVLRR
                     LESRADNILATRLTYRWLTEALHRTGQYLAELQTAERAARQGVRLNPLIEIRSLAALG
                     RDREMVSRLEQVLAARQRDWLTGHLLWAVVSELRAHRPALADSVAARALRWYGQGAGA
                     ERADPLYQERLGHLLILAGRDDEARPIFEALSRGGELPHLWLAAGPLGVLAARRGDRA
                     EALRQSARIESQLARYEYGEGTVWQAVVAAQLGNLDDATALYRRALREGLYLENDQLI
                     RPDLDPLRSHPPFQELVRPR"
BASE COUNT         1032 a         2166 c         2356 g         1106 t
ORIGIN      
        1 ttccggcgcg actggatctc gctggaggaa accggctggc gggccgccac ggccgcgttg
       61 tcggatctgg ccgccgcggg ggcgcgctgc gtgggagtgc tggcggcggt caccgcgccg
      121 cgcagctcca gcgtggacga ggtgacctcg atgctcgagg gggtgggcac ggcggtggcg
      181 gcgggggggg gcgtcgtgct gggtggtgat ctgggagcct cggatcgctg ggccattgcc
      241 gtaaccgtgt tcgggcgggc cgcccacccc atgagtcggc ggggtgcccg cccgggtgac
      301 atggtctggg tcacggggtc gctgggcggg gcccgcgcgg caacgaccgc ctggctcaac
      361 cggagaattc ccgagcccta cgcccgctcc gcctttgccc accccaccgc ccggctggcg
      421 gcagggcgat ggctcgccgg ccatggcgcc acggccatga tcgatctcag tgacggcctc
      481 gccggggacg ccgcccatct cgccgtggca tcgggggtcg cgatccacat cgagctggaa
      541 cgactcccgg tcctgccgga ggtctggccc gaagcgaagg cagccggtga ggagcccgag
      601 gtcttcgcgg ctcggggtgg tgaagactac gagctgttgg cttgtcttcc gccgagcttc
      661 acgctggacg acgcggcgcg ttgcctggtc gataccggca cgcgcctctc ccgggtggga
      721 cgcatgggtg acggcacggg ggtccgccta acgctggtcg gccggccggt attgatccag
      781 ggctatgatc atttcggatg atcaaccccc tccgattcag cctgggcgcg gtctgggcca
      841 ccctggtctg gggaacccgg gcgatccgca cggcgcggcg aggcgtcccc gatacgccgg
      901 gcggacccta cgatgaggcg gcgctgggct ggtcgcgcgg gctgctccgg gcggcgcgga
      961 tcacggtgcg gatcgaaggc ccggctcggc tccgtccccg tccggtcgtc tatgtctcca
     1021 accacatttc catgatcgac attccggtgc tggtgacggc gctgccggtg gtccccaagt
     1081 tcgtgatgaa gaaggagctg ctgcgggtgc cgctgttcgg ggcggccgcg aaagccgcgg
     1141 ggcacatcgt catcgatcgg cgcaaccagg gcgcggcctt cgccgcgtat gacgcggccg
     1201 ccgagatcat ccgccgaggc catcccgcgc tggtattcgc cgagggcacc cggagccgcg
     1261 atggccggct gatgccgttc aagaagggtc ccttcgtgct ggccatcgca gcccaggtgc
     1321 cggtggtgcc cgtggtggtg ctggggagtt acgaactgat gccgcggctc tcgctggcgc
     1381 ccaagccggg cgaagtcgtg ctgcgggtgg gcgaagacat cccgacggcg gggcttgatt
     1441 acgaagatcg caatgcactg agccagcagg cccgcgcggc gatgaaagcg ttgggcgctg
     1501 ttgaatgact atcttactgg accgcggtga acggcaaaca gtcccaacag taaacagtaa
     1561 acagttaacc gtaaacggtg aactgcgggg ccaacattga ttccgcttcg ccattcaccg
     1621 ttcaccgttc accgttcacc gttcactgtt caccgttcac cgttcactgt tcactgttca
     1681 ccgtcgagcc tgatgagcac catcatcgaa gtccacgggc gggaaatcat cgacagccgg
     1741 gggaatccca cggtcgaggc ggaggtggtg ctggccagcg gagcccgagg acgggccgcg
     1801 gtgccgagcg gggcgtcgac cggcgagcac gaagcggtcg agctgcgcga ccaggattcc
     1861 aagcggtttg gcgggaaggg cgtgctggag gcggtcaaga acgtcaacga ggtgctggga
     1921 ccgcgactgg agggcatcga tgcggccgac cagatcgcgg tggacgcgga gatgatggag
     1981 gccgacggca ccagcaataa atccaagctg ggtgccaacg ccttgctggc ggtgtcgctg
     2041 gccgtggcgc gcgcggcggc ggaggagacc ggcctgcccc tgtatcgcta tctggggggc
     2101 ccgatgtccc ggatcctgcc agtgccgctc atgaacatcc tgaacggcgg ggtccacgcc
     2161 tccaacaacg tcgacgcgca ggaattcatg gtggtgccga tcggggccga tacgttcgcc
     2221 gatgccctcc ggatgggcat cgagaccttc catgccctga agagcgtgct cggcaagatg
     2281 ggcctctcga ctgcggtggg cgatgagggc ggcttcgccc cccagttgcc gtccaacgag
     2341 gcggcgctcg acgtgctgat gcaggcaatc aagaacgcgg gctacgagcc cggaaccgaa
     2401 atggcgatcg cccttgatgt ggccgcgtcg gagctctacc aggacgggga gtacgtcttc
     2461 aagaagggcg acggcagccg gcgtaccgcc gagcagatgg tcgatctcta cgccggctgg
     2521 gtggagcgct atcctatcgt gtcgatcgag gacgggttgg cggaagacga ctggcccggc
     2581 tggacccggc tgaccgagcg gctgggcgac cggatccagc tggtgggcga tgatctcttc
     2641 gtcaccgacg tcgaccggct gggccgcggg atcgacgaag gcgtggggaa tgccgtgctg
     2701 gtgaaggtca accagatcgg gaccctcacc gagacgctgc agtgcatcga gctggccaag
     2761 ggcagcgcct acggggtcat catctcgcac cgctcgggcg agaccgagga caccttcatc
     2821 gcggacctgg cggtcgccac cggcgcggga cagatcaaga ccggctcggc cagccgcacc
     2881 gaccgggtcg ccaagtacaa ccagctgctt cgcatcgccg aagagctggg tgagctgggt
     2941 cactatcctg gccgggatct ctaccgcctg tgaccgcccg gcggctggtc gtagcgctgc
     3001 tggcgctggc cctgctcttc gcgctgcagg gcggggaata cagcacctgg gacttcttca
     3061 ccctcaagcg gcagcagcgg gaggagcgaa tccggatcgc cgagctggaa caggaggtgg
     3121 attcgctgga gcgggaagcc attgcggtgg agaccgaccc ggaagtgcag gagcggctgg
     3181 cgcgcgagct ctacggcatg ctgcggccgg gggaattcgt ctataacatt ctgtgggagg
     3241 agagcggtcg aaaggactga gcagcgagtc gaaattgcgg cagctcgctc actcagtcct
     3301 ccgtcctcgc ggcttcattc ctgccgacgt cagggcagcc gatacaccag gtcaccgatg
     3361 tccacagtgc ccacctgcgc caccctcttg gtcgagagat gcccgttcat gcgccagacc
     3421 ggaacgtcgg tcgcgtgcac atggacccgg aacccttcgg gtgacacagg cacgccgggc
     3481 acgattggaa tggggtccga attgtgatag atcccggacg ggccggcggc gtcgtggccc
     3541 cagatctgga tcttggtgac tgcgcccgac ctgacgccta ctgtgaactc gattccgtcc
     3601 acgagctggg cgccgctgct ggtcgtgacc acgaggcaac cctgattcgt tccctggtcg
     3661 gtgtcgccga agcgaatcag ataactggcc tgcgaatcac cggcacaggt cgactgcacc
     3721 aggttgtcac cctggaaatc gtccgagacg atgtccacga ccagggcgtc tccgccgttc
     3781 cttcctgcgt tcccgccctt ggccgggttc atgtttccag gtcccgagac gacatcgctg
     3841 gtggcgcatg cgcacagagc gactcccagg acgagacggg cgccctcccg ccagcccctc
     3901 atggatacct ccggtctcgt tgagttcgat ttgcgaaaca accagccggg cgtaatctat
     3961 gggcaccggt cacgccgccg tcaccgcctc cgtgaccgcc agagagggat ggcgtgatcc
     4021 acttcaggct tctcggttcc ctggagctcc ggtcggcgga aggccgcgaa ctcccatcct
     4081 tgctctccca acccaagcgg ctggccctgc tggcgtacct agcggctgct gccggtgagg
     4141 gccactgccg gcgagatgcg ctcctggccc tcttctggcc tgacctggac accggccgag
     4201 cccgccatgc tctgaaccag gccctgtacg tccttcgtca ggtgctgggg aaagacattc
     4261 tgctgctccg gggtgaggag gaggtgggcg tcaaccggct agggatgtgg tgcgacgtca
     4321 ggggattcga cgatctggcc cgcgacggcc agttcgaggc cgccctggca ctgtaccgtg
     4381 gcgagctcct gagcggcttc catgttgatg gctgccccga atttgagcgg tggatggatg
     4441 gaacgcgggc cgaactggcg cgccgcgcca agcaggccgc cctgctgctg gagaagcgtg
     4501 cgcgagacac ccgcaacctt gcggggcaag ctcactggct gcgcgaggcg ctccgcctgg
     4561 acccgtggga cgagggggtc gtgggtcgtc tgttggtcgt gctcggggcg ttaggcgatc
     4621 gagcaggcgg gctgcgggaa ttcgatgcct tccgccaccg gctgcggaac gagttcgaga
     4681 tggagccgtc ggccgcgctg ggggacgcag ccgaccgact gcggcgggac agcagtccgg
     4741 tcagtgaccc ggccccggca ccggcggcat tgatgccgtc taccctgcct ggtactcgtc
     4801 gccgacaggc gagagtcgta atcaccggac tcgccctggc gctgctgggt ggcggggtga
     4861 tcaccctggt tggcaggaag ccttccgctc ccgctccgac ccggccacgg cgggtggtgg
     4921 tcgtggcatt cgacaatctc accagcgaca gcggtctggc gcagctggcg cggctggcgg
     4981 gcgatcagat cgcggcaggt ctggcccaca gcggcttggt cgaggtgatc ccggcgagcg
     5041 tagcgtggcg cgggccgggt cagccgttga ttcgggaagc cgagcaaggg ttggtggtgc
     5101 gaggatccgt tacccgggcg gccgatcagg ttctgctgcg gagcgagatc gtggatgcct
     5161 cccgcggtcg gctggtccgc tcgatcaccg aaacggcccc tgaggcacag ccgctgccgg
     5221 gcgtcgcggc gctccgggac caagtgctcg gcgcgctcgc cacggtggtc gatccgcgct
     5281 tcaacacctg gatcgggacg gccagccagc cgccgagtct gaacgcctac cagctgtacg
     5341 tggacggcct cgagctcctg atgcgatcgc aatggagcgc cgcgaccgcc gtgctggaag
     5401 cggccgcccg cctggacaac ggcttcgtct cccctctctt gtgggcgctg tacgcccgga
     5461 tcgccagcgg tgcctatccg gccgccgatt cgctgagcac cgcgctcgag gcacggcggg
     5521 ccactttggc ggtttgggat cgggccatgc tggacttcct ccgaagccgg ctggtcggcg
     5581 accaggtgga cgcctactac gccatccgcc gggcggccgc ggtcatgccc acttcggaat
     5641 ggctctatct ctggggggct caagccctgt tggtgaatcg tccccaggaa gcggttgacg
     5701 ttctccgtcg gctcgagagc cgagcggaca atatcctggc gacccgactc acctaccgtt
     5761 ggctcaccga agccctgcac cgcaccggcc agtacctggc cgaactgcag accgctgaac
     5821 gagcggcccg gcagggcgtg cggctcaacc cgctcattga aatccggtcc ctggcggcgc
     5881 tgggccgaga ccgggagatg gtgtcgaggc tcgaacaggt gctggccgct cggcagcgcg
     5941 actggctcac gggtcatctt ctctgggcgg tggtctcgga gttgcgggct catcggcccg
     6001 cgctggcgga ctcggtggcc gcacgggcgc tgcgctggta cggccagggc gctggggcgg
     6061 agcgggccga cccgctctac caggagcgcc tcggccacct cctgatcctg gcgggccggg
     6121 acgacgaggc tcgccctatc ttcgaggctc tgagccgtgg cggagagctg ccgcacctgt
     6181 ggctcgcggc aggaccgcta ggcgtcctcg cggcacgacg gggggatcgg gccgaagccc
     6241 ttcgtcagtc cgcccgcatc gaatcgcagc tcgcccggta cgagtacggt gaggggactg
     6301 tatggcaggc cgtggtcgcc gcgcagctgg gtaacctgga cgacgcaacc gcgctatatc
     6361 ggcgcgcgct tcgcgaagga ctctatttgg agaacgatca gctgatccgg cctgacctcg
     6421 atccgctccg gagccatccc cccttccagg agctggtacg cccccgctga gtctcccacg
     6481 ggttccatcg actcactcct gactcctcag tccttactcc tcaccacatc gtgtccggcc
     6541 acttccaggg cgtggatcgc cagctccagg tccgatccct tcaccaggat gtaatccgtg
     6601 tcatgggtcg acacggccga gaccggcagg ccggcgttgg cgagcggctg catgatctga
//
LOCUS       DASWKS010000402         2849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3521198, whole genome shotgun sequence.
ACCESSION   DASWKS010000402 DASWKS010000000
VERSION     DASWKS010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3521198"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VGA78_11460"
     CDS             complement(<1..243)
                     /locus_tag="VGA78_11460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894534.1"
                     /translation="MKRLRVPAALAVYLSAIAAAFSGSWPWPRLQVAPAITVSSAWVE
                     VADTLRRGETVGQLFARQGLGSLNMSDLARIGFDPRR"
     gene            complement(249..1439)
                     /gene="ftsZ"
                     /locus_tag="VGA78_11465"
     CDS             complement(249..1439)
                     /gene="ftsZ"
                     /locus_tag="VGA78_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX9894535.1"
                     /translation="MQNPDLEGGTMRFELEEGNGQSARMKVVGVGGGGGNAVNRMIEE
                     RLQGVEFISVNTDAQALSGSKSDIKVQIGKKLTRGLGAGARPEIGRQAIEENRDEVVE
                     TLQSADLIFVTCGMGGGTGTGAAPVISQLARDIGALTVGIVTKPFLFEGRKRMKQAEM
                     GITEMRRNVDTMIVVPNERLLAVVGKGIPFQDALKKADEVLLHATQGISSLITNTGII
                     NVDFADVRTIMQNGGAALMGTGVGRGENRAQEAAQQAISSPLLDNVSITGATGVLINI
                     IGGSDLTLGEATEISDIIHDAVGDDAEIIFGAATDPAMAGEVRVTVIATGFDRAVAGE
                     QPVSRYGATLTVPQPGVISLQARRTPVSPPPKAAPPPMPRTTPPLTELPDMEIPTFIR
                     RQMD"
     gene            complement(1604..>2849)
                     /gene="ftsA"
                     /locus_tag="VGA78_11470"
     CDS             complement(1604..>2849)
                     /gene="ftsA"
                     /locus_tag="VGA78_11470"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX9894536.1"
                     /translation="QVQRLVAGLDLGSSKITGVIGEVTGDARAPGVKVLGVGSEKSAG
                     VRRGVVRDIEETTRAIGKAMKDAQLMAGVEVGTVYCGMAGEHVSGRSSHGVVSVTGSE
                     IRTGDVARVNDVAANVSFGLGHELLHAIPQDYIVDQQPGITDPIGMTGSRLEAEVYLV
                     TALGTALQNMRKCVERAGYHVGEFVLESLAASLAVLRPDERDLGCALVELGGGSTTVS
                     IFHEGKIRHFASLMFAGQHVTNDIVHGLQVTQQEAEKIKHRFGAAYEPLMSDEDRFDL
                     PGTPGQGVRLASRRVLAHIIHMRLQEVLELAMGEISKAGYQQHLPAGVILTGGGSQLP
                     GIVELAREVYALPVRLGAPGEGLAGLVDSVETPRMAVPAGLVLYGARQIALGSGFGSG
                     RSRSPAVEKVLGPVKRWLQDFF"
BASE COUNT          458 a          994 c          897 g          500 t
ORIGIN      
        1 ccggcggggg tcgaagccga tgcgggccag gtctgacata ttgagcgagc ccaggccctg
       61 gcgggcgaac agctggccca ccgtttcgcc ccgcctcagg gtatccgcga cctccaccca
      121 ggccgacgag accgtgatcg cgggcgccac ctgcagtcgg ggccagggcc aactgcctga
      181 gaaggcggcg gcgatggcgg acagatagac ggccagggcg gcaggaaccc gcaggcgctt
      241 cacaagggct aatccatctg ccgtcggatg aaggtcggaa tttccatgtc gggaagttcc
      301 gtgagcggcg gcgtggtgcg gggcatcggc ggcggcgcgg ccttgggcgg cggcgacacc
      361 ggcgtgcgac gggcttgaag cgagatgacc cccggctgcg gcacggtcag cgtggcccca
      421 tagcgcgaca ccggctgctc tccagcgacc gcccggtcga atccggtggc gatcacggtc
      481 acccgcactt caccggccat cgccggatcg gtcgcggcac cgaagatgat ctcggcatcg
      541 tctcccaccg cgtcgtggat gatgtcgctg atctcggtcg cctcacccag ggtgaggtcg
      601 ctgccgccga tgatgttgat gaggacaccg gtggcgccgg tgatggagac gttgtccagc
      661 agaggactgg agatggcctg ctgagctgct tcctgggccc ggttctcgcc ccggccgacc
      721 ccagttccca tgagcgccgc accgccgttc tgcatgatgg tgcgcacgtc ggcgaagtcg
      781 acattgatga tgccggtgtt ggtaatgagg ctggaaatac cctgggtagc atgtagcagg
      841 acctcatcag ctttcttgag cgcgtcctgg aaagggatgc ccttgcccac caccgccagc
      901 agccgttcgt tcggcacgac gatcatcgtg tccacgttac ggcgcatctc ggtgatgccc
      961 atctccgcct gcttcatccg cttgcggcct tcgaacagga agggcttggt gacgattccg
     1021 accgtcaggg ccccgatgtc ccgggcaagt tgcgagatga ccggcgcggc gccagtcccc
     1081 gtccctccgc ccataccgca ggttacgaag atgaggtcag cactctgcaa ggtttcgacc
     1141 acttcatcgc gattttcttc gatagcctgg cggccgattt ccggcctggc accggcgccc
     1201 agcccgcgtg tcagcttttt gccgatctgg actttgatgt cagactttga gccgctcagc
     1261 gcctgcgcat cggtgttcac cgagatgaac tcgacacctt gcagccgctc ttcgatcatg
     1321 cggttgacgg cgttgccccc gccaccgccg acccccacga ccttcatgcg ggcgctttga
     1381 ccgttgcctt cttctaactc gaatctcatg gtaccgccct cgaggtcggg gttctgcaaa
     1441 tcagcgttcc gagttcctgg ttccaggtgc catgtgcggt gctgggtgcg gtgctatgtg
     1501 ccaagtgctc cgtgaggtga aaagcaccag cttagcaccc ggcacttccg caccgcacct
     1561 ggcaccgcac caggcacgcg gaacctggaa cttggaacgt gcctcagaaa aagtcctgca
     1621 accaccgctt caccggcccg agcactttct ccaccgccgg tgaacgactc cgtccgctgc
     1681 cgaatccgct gcctaacgca atctggcggg cgccgtagag caccaggccg gcggggaccg
     1741 ccatccgcgg cgtctccacg ctgtccacca gccccgccag cccttcgccc ggcgcgccca
     1801 gccgcaccgg aagcgcgtac acttcgcggg ccagctcgac gatcccgggc agctgcgagc
     1861 cgccgccggt gaggatgacg cccgccggca ggtgttgctg gtagcccgcc ttggagattt
     1921 cgcccatcgc gagctccagc acttcctgca gccgcatgtg aatgatgtgc gccagcaccc
     1981 ggcgggaggc gagccggacc ccctggcccg gcgtgcccgg caggtcgaaa cggtcttcat
     2041 ccgacatgag cggctcgtag gccgcgccga accggtgctt gatcttctcc gcttcctgct
     2101 gggtcacctg caggccgtgc acaatgtcgt tggtgacgtg ctggcctgcg aacatcaggg
     2161 acgcgaagtg acggatcttg ccttcgtgga atatgctcac cgtggtcgaa ccgccgccca
     2221 gctccaccag ggcgcagccc agatcgcgct cgtcgggccg gagcacggcc agcgacgccg
     2281 ccagcgattc cagcacgaac tcgcctacat gatagccggc ccgctccaca cacttgcgca
     2341 tgttctggag cgcggttccc agcgcggtga ccaggtacac ctcggcctcg agccgcgaac
     2401 ccgtcatgcc gatcggatcg gtgatgccgg gctgctggtc gacaatgtag tcctggggga
     2461 tggcgtgcag cagctcgtgg cccagaccga acgacacgtt ggcggcgacg tcgttcaccc
     2521 gcgccacatc gccggtccgg atttccgatc cggtgacgga caccacgccg tgtgagctcc
     2581 ggccgctcac gtgctctccg gccataccgc aatagacggt accgacttcg acgccggcca
     2641 tgagctgggc gtccttcatc gccttgccga tggcgcgagt ggtttcctcg atgtcgcgga
     2701 ccacaccccg acggaccccg gcgctctttt cgctgcccac ccccagcact ttgacacccg
     2761 gcgcgcgggc atcaccggtg acctcaccga tgacgccggt gattttcgag ctgcccaggt
     2821 cgagcccggc caccagccgc tgcacctgc
//
LOCUS       DASWKS010000403         3721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3521301, whole genome shotgun sequence.
ACCESSION   DASWKS010000403 DASWKS010000000
VERSION     DASWKS010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3721
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3521301"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VGA78_11475"
     CDS             <1..1039
                     /locus_tag="VGA78_11475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894537.1"
                     /translation="YDLYADERLTGSERDALIEKVTDYYLSRKEYAFAPVPKAMALMD
                     EQYFSQGFRKGYPKFNGLIWAYHWLQVGLYEPLIVGKTPADRKAGVKATLARFWSMLE
                     DPPNRFPGVMPITSAIAPNFSAKHPRAAVIFDNLHMMHDIISDILVADTIPRDRKRAV
                     IYAQLVEFRDSTSNVMSMEEWRNMGEMMGGIAAMGGAATGILAAAPKRDTAAMKHGAM
                     RHGAAAKDSMKAPAAAAPQHRHETPPPAAPRDSGAAGPARPMNAEMAAMMASMMAMHE
                     RMMADPIIRQRMLADTAMRRMMRDMMEHMPPEHREHMRAMMEAKPPAANAKKPPAHAH
                     PPADTTRRRPG"
     gene            1105..1248
                     /locus_tag="VGA78_11480"
     CDS             1105..1248
                     /locus_tag="VGA78_11480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894538.1"
                     /translation="MIAGALLATISGWHRTAGDILLVIAALGLARVSLGAWYAAWRGR
                     SRQ"
     gene            complement(1273..1773)
                     /locus_tag="VGA78_11485"
     CDS             complement(1273..1773)
                     /locus_tag="VGA78_11485"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9894539.1"
                     /translation="MKVLFGVTVAILGAAACGSSDMMNPGDDLPAVARVVPAAEATGV
                     DPAAPIVVQFTHAMMAGMEQYVALHVGETPAGPVVDGGWTWSSDRTVLTFVPVVPLQS
                     STRYTIHLGGGLRDSLNREVNHGACAAQGGRTTTSGMMAGSGMMGGGWRHSNGTYGML
                     FSFTTA"
     gene            1981..3090
                     /locus_tag="VGA78_11490"
     CDS             1981..3090
                     /locus_tag="VGA78_11490"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9894540.1"
                     /translation="MNTGMLSQSPALSRERPIPSVQVALALGGGAARGLAHIGVIEIL
                     DREGIPVDFIAGSSMGGLIGALRASGLPAENLVEAARSFRFPRWFLPGGLIKWESLFP
                     SATSLLAGTFEELSTPLAIAALDLEEGAQVILHRGPLLPAVRASCAVPGILAPVRLDG
                     RWLVDGGVVNVLPVDVAWMADPEIVVAVRVGAPRARRMPQLEWRFTSLLSRLGGAVPN
                     PATAKVAFEILTRAAEVLLERQTALTAAMADPEVLVEPRLGDLGLRDFHRLDEAVAAG
                     RRAAEEVLPAIERLLKSPPQRAPGGTRCVNLYFDPVCSMVVNPTRARASLSHEGVVFY
                     FCSPNCLDCFARDPARYCSPDRLAFASGNQASATR"
     gene            complement(3119..3553)
                     /locus_tag="VGA78_11495"
     CDS             complement(3119..3553)
                     /locus_tag="VGA78_11495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894541.1"
                     /translation="MRSYRWIGAAVIVTLAACGRKPGTADAPAADSAGKMTGMAMQSM
                     QMMPAMRAHLDSMAAMRPEQLPAMMAAHQDLASRMMDAMDADMRGMNLQPDAAWTALS
                     DSVRRDLADLPGLSGEAQRSRMEAHIARMQRTMTMHQGMMKM"
BASE COUNT          640 a         1259 c         1190 g          632 t
ORIGIN      
        1 ctacgacctc tacgccgatg agcggctgac cgggagcgag cgggacgcgc tcatcgaaaa
       61 agtcacagac tattatctga gccggaagga gtacgcgttc gcaccggtgc ccaaggccat
      121 ggcgctcatg gacgaacagt acttcagcca gggattccgc aagggatacc ccaagttcaa
      181 tggtctgatc tgggcctatc attggcttca ggtcggtctc tacgagccgc tgatcgtggg
      241 caagacgccg gccgatcgga aggccggagt caaggccacc ctggcgcgtt tctggtcgat
      301 gctggaagat ccccccaacc ggttccccgg ggttatgccg ataacctcgg ccatcgcccc
      361 caacttcagc gccaagcatc cccgggcggc cgtgatcttc gataatctgc acatgatgca
      421 cgacatcatc tccgatatcc tggtcgctga caccattccc cgcgaccgga agcgggcggt
      481 gatttacgcc cagctggtgg aatttcggga cagcaccagc aacgtgatgt cgatggagga
      541 atggcggaac atgggcgaaa tgatgggcgg catcgcggcc atgggcggag cggccaccgg
      601 aatcctggcg gcagccccca agcgggacac ggccgcgatg aagcacgggg cgatgcgcca
      661 tggtgccgcg gcaaaggatt ccatgaaggc tcctgccgca gccgcgccgc agcaccggca
      721 cgagactccg ccaccggcgg ctccccggga ttcgggagcg gccgggccgg ctcgcccgat
      781 gaacgccgag atggccgcaa tgatggccag catgatggcg atgcacgaac ggatgatggc
      841 ggatccaatc atccggcagc ggatgctggc cgacaccgcc atgcgccgga tgatgcggga
      901 catgatggag cacatgccgc cggagcatcg ggaacacatg cgggcgatga tggaggccaa
      961 accgcccgcg gccaatgcta agaagccacc agcccacgcc caccccccgg ccgacaccac
     1021 ccgccggcgg cccggctaga tcgagggttg cacactaggc caggagaacc agcaagacct
     1081 gtcaactcgg agaaagatgg agcggtgatc gccggtgcgc tcctggcgac catcagcggc
     1141 tggcaccgca cagcgggaga tatcctcctg gtgatcgctg ccctcggact cgcgcgagtg
     1201 agcctgggcg cgtggtacgc tgcctggcgc gggcgaagcc gacagtgacg gcgccgccgg
     1261 acgggtgcgg aatcacgccg tggtaaagga gaacagcatc ccgtaggtcc cattcgaatg
     1321 acgccatccg ccacccatca tcccactccc cgccatcatg ccggacgtcg tggtccttcc
     1381 gccctgggcg gcgcacgccc cgtgattgac ctcccgattc aagctgtcac gcagtccccc
     1441 gcccaggtga atcgtgtagc gggtactgga ttggagcggc accaccggga cgaacgtgag
     1501 aacggtgcga tcgctcgacc aggtccaccc cccgtcgacc accgggcccg caggggtctc
     1561 tcccacgtgg agggcgacgt actgctccat gccggccatc atcgcatggg tgaactgcac
     1621 cacgatcggc gcggcaggat cgactccggt cgcttccgcc gctggaacga cccgcgcgac
     1681 ggcaggcaga tcatccccag ggttcatcat atccgaagaa ccgcatgcgg cggctcccag
     1741 gatggccacg gtcacaccaa agagcacctt cacatgcact ccaacgttga gtcagggaaa
     1801 caatttgttt ccgtaattgt gaaacctcct gtaacccacg atgacggttt ggcaacccca
     1861 ggatcgagcc atcatgaact cttcatctgg cactcatacc ccagcgagta ggttcatgga
     1921 ggcgttcttc caatcagggc aggaggccaa accactgcgc ttgcctcacc agagtatccg
     1981 atgaacaccg gcatgctcag ccaatcgccg gcgctttccc gcgagcggcc aattccgagc
     2041 gtccaggtcg cgctcgcgct cggcgggggg gccgcgcggg ggttggcgca catcggggtc
     2101 atcgagatcc tggatcggga gggaatcccg gtcgacttca tcgccggcag cagcatgggt
     2161 gggctcatcg gagctcttcg ggcgagcggg ctccccgccg agaacctggt cgaagccgcc
     2221 cgaagcttcc gctttccacg gtggttcctc cccggtggac tgatcaagtg ggaatcgctg
     2281 tttccgtccg ctacgtccct cttggcgggg acattcgagg agctgtcgac gccgctcgcc
     2341 atcgcggcac tcgacctgga ggagggggcc caggtgattc tgcaccgtgg cccgctgctc
     2401 cccgcagtcc gggcgagctg cgcggtgccg ggaatcctgg cgccagtgag gctcgacggt
     2461 cgctggctgg tggacggagg ggtggtgaac gtactgccgg tcgacgtggc ctggatggcc
     2521 gatccggaaa tcgtcgtcgc tgtccgagtt ggcgcgcccc gtgcccggcg gatgccgcaa
     2581 ctcgagtggc gctttacgtc gctcctgtcg cggctgggcg gagccgtccc caaccccgcc
     2641 accgccaagg tggcattcga gatcctcacc cgcgccgcgg aagtgctgct ggagcggcaa
     2701 acggcgctca ccgcggcgat ggcggacccc gaagtgctgg tcgagccccg cctgggagac
     2761 cttgggctac gtgacttcca ccggctcgac gaggccgtgg cggcgggccg gcgtgcggcg
     2821 gaggaagtgt tgcccgctat cgagcggctc ctcaagtcgc cgccccagcg cgcccccggt
     2881 ggtacgcgtt gcgtgaacct gtactttgac ccggtctgct ccatggtggt caaccccacc
     2941 agggcgcgtg cgagcctcag ccacgaggga gtggtgttct acttctgctc gccgaactgc
     3001 ctcgactgct tcgcccgcga tcccgctcgt tactgtagtc cagaccggct cgctttcgcg
     3061 agcgggaacc aggcgagcgc gacccggtga cggagacgtt ggacttgagg gcccgctttc
     3121 acatcttcat catgccctgg tgcatcgtca tcgtccgctg catccgcgcg atgtgcgcct
     3181 ccatccggct cctctgggcc tcgccggaca ggcccggcag gtcggccagg tctcggcgca
     3241 ccgaatcgct cagcgccgtc cacgccgcgt cgggttgcag gttcatcccc cgcatgtcgg
     3301 cgtccatcgc gtccatcatg cgtgaggcca ggtcctggtg cgccgccatc atcgcaggaa
     3361 gctgttccgg ccgcatggcc gccattgagt ccagatgcgc ccgcatcgcg ggcatcatct
     3421 gcatgctctg catcgccatc ccggtcatct tcccggcgct gtctgctgcc ggggcatcgg
     3481 ctgttcccgg cttcctccca caggccgcga gtgtgacgat taccgcggcc ccgatccaac
     3541 gatagctccg catcgccagg tccctcctta cttcttcgct acgagtgcca tgccgcattt
     3601 cgggcacttg cctggcttgt cctgcttcac ctccggatgc atcggacagg tgtactgggt
     3661 ggccatgagc gctctcctta caacagtggg ttgtgcagct ccgatgggaa gccttcggct
     3721 c
//
LOCUS       DASWKS010000404         1657 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1701282, whole genome shotgun sequence.
ACCESSION   DASWKS010000404 DASWKS010000000
VERSION     DASWKS010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701282"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1599)
                     /locus_tag="VGA78_11500"
     CDS             complement(<1..1599)
                     /locus_tag="VGA78_11500"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX9894542.1"
                     /translation="MSSGHSKAPPTGKALAALAFTSLGVVYGDIGTSPLYTIKECFTG
                     HHSVPPTEENVFGVLSLIFWSVNFIVSFKYVSFVLRADNRGEGGIFALLALVRPMTRA
                     NSTRVMLIMLGLFGAALLYGDGVITPAISVLGAVEGLTVAAPPLAGWVWPVAAVILTA
                     VFALQKRGTARIGRLFGPIMALWFSSIALLGVRGILMAPEVLKAISPWYAVDFFIRDG
                     VQGFLILGSVVLAFTGAEALYADIGHLGVRPIRVTWFAVVLPCLMLNYFGQSALLLVD
                     PEASTNPFFSLAPAWGVYPMIGIATAAAIVASQALISGAFSLTRQAVQLGYIPRVTVV
                     HTSSTEIGQIYIPEVNWALWIGCVALVMGYQSSTNLAAAYGIAVTGTMVITTLLFHTM
                     ACDRWGWPRWQARALTALFLVVDLAFFGANIIKIQEGGWFPIVVGIGVYVLMTTWNRG
                     RARLQAIVQENTLEMGLFLSDVARRNPPRVPGTAVFLTSNVAGAPPVLLHHLKHNKVL
                     HEKVILMSVVTEEIPTVDWEDRVEC"
BASE COUNT          330 a          554 c          537 g          236 t
ORIGIN      
        1 gcactccacc cgatcctccc agtccaccgt ggggatctcc tcggtcacca ccgacatgag
       61 gatgaccttc tcgtgcagca ccttgttgtg cttgaggtgg tgcagcaaga ccggcggggc
      121 gccggcgaca ttcgaggtga gaaagactgc ggtgccgggc acccgcggcg ggttccgccg
      181 ggccacgtcc gagagaaaga gtcccatctc cagcgtattc tcctggacga tggcctggag
      241 ccgggcgcgg ccccggttcc aggtcgtcat cagcacgtag acgccgatgc ctaccacgat
      301 cgggaaccag cctccctcct ggatcttgat gatgttcgca ccgaagaagg ccaggtccac
      361 caccaggaac aaggccgtga gcgcccgcgc ctgccagcgc ggccagcccc accggtcgca
      421 ggccatggta tggaagagaa gcgtggtgat gaccatcgtg ccggtaaccg cgatcccgta
      481 cgccgcagcg agattggtgg agctctgata gcccatgacc agagcgacgc acccgatcca
      541 gagcgcccag ttgacctccg ggatgtagat ctgaccgatc tcggtgctgg acgtgtggac
      601 gaccgtcacc cgtgggatgt agcccagctg gaccgcctgc ctggtgagcg agaaggcccc
      661 tgagatgagc gcctgcgagg ccacgatggc cgcggcggtc gcgatcccga tcatggggta
      721 cacgccccag gcgggcgcca gcgaaaagaa cggattggta ctggcctcgg ggtccaccag
      781 cagcagggcg gactggccga aatagttcag catgaggcag ggcagcacca cggcgaacca
      841 ggtgacccgg atgggccgca cgcccagatg cccaatgtcc gcgtacagcg cctctgcccc
      901 ggtgaaagcg agcaccaccg agcccaggat caggaacccc tggaccccat cccggatgaa
      961 gaagtccacg gcgtaccacg ggctgatcgc cttcaacact tcgggcgcca tcagaatgcc
     1021 ccgaaccccg agcagggcga tcgagctgaa ccacagcgcc atgatgggtc cgaacagccg
     1081 cccgatccgg gcggtgcccc gcttttgaag ggcgaagacg gccgtcagga tgaccgcggc
     1141 gaccggccag acccaacccg ccagcggagg cgctgcgacc gtcaatccct ccactgcccc
     1201 cagtacggag atggccgggg tgatgacgcc gtcgccatac aggagcgcgg ccccgaagag
     1261 cccgagcatg atgagcatca cccgcgtgct gttggctcgc gtcatcggcc ggaccaacgc
     1321 tagcagcgcg aaaatgcccc cttcaccccg gttgtcggcc cggagcacga aactgacgta
     1381 cttgaaggag acgatgaagt tgacggacca gaaaatcagg gagagaacgc cgaagacgtt
     1441 ctcctcggtg ggcggcacgc tgtgatgacc ggtgaagcac tccttgatcg tatagagcgg
     1501 gctggtcccg atgtcaccgt agaccacgcc cagactggta aaagcgagcg ccgccagtgc
     1561 ctttcccgtg ggcggcgcct tcgaatggcc ggacgacact cagccgttcc cgcgccccgt
     1621 cgccgcgccc ccgtcgtcgg tcatggagtg gaagggg
//
LOCUS       DASWKS010000405        18858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1312171, whole genome shotgun sequence.
ACCESSION   DASWKS010000405 DASWKS010000000
VERSION     DASWKS010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 18858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18858
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312171"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..1190)
                     /locus_tag="VGA78_11505"
     CDS             complement(33..1190)
                     /locus_tag="VGA78_11505"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9894543.1"
                     /translation="MLALGGAWLPPVAAQSGSPREELKRFFTLSVAEEGIVGAGMYLV
                     ARTGVIDSVFAGLADRDQGRPVTGATIWHWASITKTFTAIGVMQLRDRGLLSLADPIV
                     KFVPELRAVHNRYGSMEAITLRQLLSHSSGFRSPTWPWGGDQAWHPFEPTEWSQVVAM
                     LPYTEILFPPGSRYQYSNPGVIFLGETIRRLTGDEYEVYADKNLLDPLGMYSSYYDVT
                     PYHLRAQRANNYYLIDGKTQANGIDFDTGITTSNGGLNAPLADMAKYLRFLLGGQGGL
                     VRRSTLEEMWRPVIPVGQPGAGNGERASVGLGFFITEYPGGVRLIGHTGSQAGFRSFF
                     WLHPESGTGIIANFNTSPPSEDAGPEVKPGIQRIFSGLVQRYVIWLQSEAR"
     gene            complement(1228..1596)
                     /locus_tag="VGA78_11510"
     CDS             complement(1228..1596)
                     /locus_tag="VGA78_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9894544.1"
                     /translation="MPTDCTHYRWDDMPRERVNDLLDRRLITAERMMLAHVYLKRGCL
                     VPMHQHENEQLTYILDGALEFTLGADRGRTVVVRSGEVLVIPSNLPHEAVALEDTLDV
                     DVFSPPREDWLRGTDAYLRR"
     gene            complement(1616..3763)
                     /locus_tag="VGA78_11515"
     CDS             complement(1616..3763)
                     /locus_tag="VGA78_11515"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9894545.1"
                     /translation="MTSRTLVLAVLTLVPGMTAAQQQGRGFTPNDWYRVTNVSSPAIS
                     PDGRLVAFTVTTVVTGENKRHSEIWVGGSEAGAPVRYTSPSVESSNPRWSPDGRLLLF
                     TSTRPGAKGRTFALRMDAPGGEAFEYDSIPAGSVSADRKLLAWSEPVREDSSGGRADD
                     PYSKMKAEARPPFGAITKPLDPARFDGRHYVDWPIKGNGQGYLANRSTARVWRPAQIW
                     VQQLDGNVRRQITMDGYSHGDVQISPDGRWIAFTADSELRADSAAQVVRDSLARLPYN
                     AKRDEAPRNERDIFVIPAAGGTARRVARLMGVEVNLEWSPDGKYLSFVHRATRMANAR
                     LMRVPSAGGEVENLTPSWQFEPDNYSYLPDGAILVGASIGGRTALFRLDPATRQMTEL
                     LGARRRINGWNLDPAGRRVAFVASSLTQPTEVFVANADGSGERKLSSFNDALNREIAW
                     SDAERFTYKSVGGLEIEGWLMRPFGYQAGKRFPLVLYIHGGPHGAYGENWFDEFQNLA
                     GAGYWVLFTNPRGSSSYGADFTFATRGRWFAEDYEDLMRAVDIAARRPDVDSTRMGVT
                     GGSYGGVMTAWVTVKTSRFKAAQADRMISNWWSWYGSSDAQGLTEFEFYGKPWDNPAL
                     YDSLSPLRYIRKVKTPTLIVQSEEDHRTPMTDAEQWFLGLKKQGTPVEFVRYPRSTHD
                     LSRTGEPWLLVDRLGRLRQWFDHWLREPPAVAN"
     gene            4374..4835
                     /locus_tag="VGA78_11520"
     CDS             4374..4835
                     /locus_tag="VGA78_11520"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX9894546.1"
                     /translation="MKQVWLLAAVLTAGTVGAQAQADPPRPSREERLNRRHWEGLGLT
                     EEQRNSLRALREERRTALRQRMAETQERMRRVLTEEQRHRLEALRESRVHREEFRRNR
                     FGRDEARRELIRREFLRRHDFRQDAWRRDFRRGRWERLQRERRLRERYWRD"
     gene            complement(4820..6430)
                     /locus_tag="VGA78_11525"
     CDS             complement(4820..6430)
                     /locus_tag="VGA78_11525"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9894547.1"
                     /translation="MNPPLRGPRLVAAAVALTLALGGCGKPADCPRCETLVIAALGEP
                     DHLLSPFVWQSVGRDIGDLVYERLAILDPVRAPLDSTAYRAGLAERWERVDSLTWLFH
                     LRPDARWQDGVAVTASDVVFSFEAHQDSALDAANRAALSDLRATTEDDRTVRIAFQSY
                     RPDQLYDATSHVRVFPRHVWDSVPRDRWGASADPARLTGSGPYRVAEWRRGQLLTLEA
                     VSASAPIRRITWQFAQGPDALTNLVLSGDVDLVETLPDQARLAEVSRAPHLKVISYPS
                     AVYGFLGFNFARRGGWNDVRVRRALTLGLDRETLVRAIFGPGTAVPNGPLSAQLWLWE
                     TPPGAEGDSAAAVRLLDSAGWTPGRDGLRRQQSRSLTVDILVPGTSAPRRSLATAIQE
                     RWRRLGVQATVTVVDFPVFQERLGQGRFDTYIGSWLDEPHPRSLTDQWTRGGWGNLNY
                     GKYASPAFDSVFALAVSEADSARARSYWRTALQTLNADAPAIWLFNPRNNAVVHRRVG
                     ADRFPPFAWLSDLPGWALADPASVQSRQ"
     gene            complement(6427..7389)
                     /locus_tag="VGA78_11530"
     CDS             complement(6427..7389)
                     /locus_tag="VGA78_11530"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894548.1"
                     /translation="MRQGRFREALSRFEGDQDTRHQSAEAEFHLAMAAARVGEYHRAT
                     RLAGSALRRFVDVSNRGGQLHALNLLGGVSFEQGRLDDAECWFRDAQRLAEAIRDAGI
                     GARAWNNLALIAHLRGRPHLAVETWRRALRLYEELQDTRGAVQTHHNLGLAYRELGLL
                     HAAHDHVALAMKLVDQVSDPSLKGLVVLGQAELEFSEGAVDRAAALLEQATQIATASD
                     DQTGLVNAGRLRALMALRARQYQLAKIEATAAREKAELLGARILAAECGVIAALAFRA
                     LGDDCTAEPLHRRSCHALERLGADRLSRWADREWTRATASGRSG"
     gene            complement(7437..9002)
                     /locus_tag="VGA78_11535"
     CDS             complement(7437..9002)
                     /locus_tag="VGA78_11535"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX9894549.1"
                     /translation="MPSAARLLGEAEALERSGATVDASHRYLGAIDAASTESDQVVLV
                     RALRRLAVLRHHQGKTGEADALFRQSYSLARRSGDDIGAAEALNVKAGFDFEAGRIDQ
                     ARRTYDRALRLGGQHKPLRARIEQNLGILANIQGDLDSAAQHYHRSLEAYQNIGDDAG
                     CGLAFHNLGMLSADCSHWDEADWYYRRSREIAVHLSDNHLAALCSLNHSEVYLARQQF
                     DRAMENADAALAAFERIGSKLDKADAYRVIGMVYREMGRLPLAESRLKAAQDLAAGCG
                     SMLSQAEATRELALVYQAMGRNQEALSRLTAAYRLFSGLDARLDLVDVSRKREKLEHT
                     YLGVVRDWGQSIESADSYTYGHCERVAAYALAVAQALGLDDSTRTTIQLGAYLHDLGK
                     IRVPHEILNKSGRLTDEEFEVIKQHPVWGVELLEDVEFPWDIKPLIRSHHEKYDGSGY
                     PDRLVGDAIPIGAQVLCIVDVYDAMTTTRSYRPAMSHDTAVSRMLQSRQWWRPDVLEA
                     FETAVREPARIAA"
     gene            complement(9044..9598)
                     /locus_tag="VGA78_11540"
     CDS             complement(9044..9598)
                     /locus_tag="VGA78_11540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894550.1"
                     /translation="MTGSRWSSKLTFAFLSVAALIGCSDLDAPTASQPPAMQPGLLGD
                     LGGTLGGVTQRLKATLLLCTPLPYQEVVQTIGPSGGVMQIGPHKLEIPRGALSRPVTI
                     TAVAPSERVNSIRFTPEGLRFAVKANLTMSYANCDLAILLPKRIVYTTESLSLLEILQ
                     SLDAPLRKTVSAPLDHFSRYAVAW"
     gene            9893..12532
                     /locus_tag="VGA78_11545"
     CDS             9893..12532
                     /locus_tag="VGA78_11545"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9894551.1"
                     /translation="MYLALLVFLQVPEPGVLGSQLPLHRNRRIAPAVAAVRAAAPRMD
                     GILDDPGWVTAHPVTEFRRDVPSDGLPATEGSEIRVLYDDHNLYVGARLFHRDRAGVS
                     RRLSRRDSFSVFNDVFFVLLDSYHDHSTAFVFGVTPAGERRDAIQSGDGATLDASWDP
                     VWEARTRVDSLGWTVEMRIPFSQVRFPNVPEQVWGVQFRRDIRAAGEAVDWSWSPRTE
                     SGSTSKYGHLLGLSRIPQPRRIEAVPYIGGQWRFTEGADPSNPFDDGSVYQTTAGLDL
                     KYGLTSNLTLDATINPDFGQVEADPAVVNLTAFETFFEERRPFFVERADLFRFRSSGA
                     QNFFYSRRIGRAPSLSAEGAAPYTDQPGATTILGAAKVTGRTSSGWSVGLLETVAAKE
                     RAELARPGEALPAVGVEPLSNYAVARVRREYTGGSSFVGGILTAVNRRLDEPEFGLLR
                     SAAYSGGVDFQHRFRGNAFELEGSLGGSWIRGSESAMLAAQAAPARYYQRPDQDYVSL
                     DSNATNLGGTAGNLIFRKAGGDWRYGVSGSYTSPGFEVNDIGFQTEADRIRFSGSLER
                     LWLTPGRLFRSFSSQVFLSQWYNFGGTNLNREVNAVAQGSFLNLWSVFAEAGGNFQSR
                     DDRVTRGGPLGVRPAAAYVALGAASDSRKSLRGELTAWYSWSEVGGWGWALDPRITFR
                     PQGAFDLTLQMSWRRNQADAFYVTQAPDPAAAATFGGRYVFGSLGQQSLNTTLRLNWV
                     LSPNLSLQWYAQPLLATGDYNGFKALERPSAYRFQTYGENASTLDFDPETLQYTADAD
                     GDGPAVPIRFGNPDFRIRSLRSNVVLRWEYRPGSTLFLVWNHNRGSQIFDPSWGGLDD
                     LWGLRTDPQQNILQIKLNYYLNR"
     gene            complement(12549..13082)
                     /gene="atpH"
                     /locus_tag="VGA78_11550"
     CDS             complement(12549..13082)
                     /gene="atpH"
                     /locus_tag="VGA78_11550"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HEX9894552.1"
                     /translation="MRAESIARNYAEALFMLGEKSGRTGEYADLLDAIAGAITTSPEV
                     AAVLLSPKVTKAVKIRLLDEAVSASPQEFRLFLAAVIKRGRQGLLPAMAVEYMSLLDL
                     KLDRVRAGITVAREPDQQLRARIQRTLEERLGKEVVPRWTVDPEILGGVVVRLGDRVL
                     DGSVKRRITRLRRHLVR"
     gene            complement(13079..13627)
                     /gene="atpF"
                     /locus_tag="VGA78_11555"
     CDS             complement(13079..13627)
                     /gene="atpF"
                     /locus_tag="VGA78_11555"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEX9894553.1"
                     /translation="MNAVWLAVLAAPQEEGGGMGPFQVEFGLVFWTWVVFLVLLALLW
                     KFAWPAIVQATEEREGKIRRQLGEAQTAHAEAKAALEEGKRFAAEARASAQQMLTDAR
                     QTAEQERAALLERAKREQEDMLDRARREIGAEKDKALASLRREAVDLSLAAAAKLVGQ
                     RMDSETDRKLVTEYLDSVEIKH"
     gene            complement(13634..13843)
                     /locus_tag="VGA78_11560"
     CDS             complement(13634..13843)
                     /locus_tag="VGA78_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003151167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEX9894554.1"
                     /translation="MLGAGIGIGLAILGAGIGLGRIGGQVAEAIARQPEAAGEIRGAG
                     LLIAILLEGATIIALVFALLFKLIK"
     gene            complement(14160..15035)
                     /gene="atpB"
                     /locus_tag="VGA78_11565"
     CDS             complement(14160..15035)
                     /gene="atpB"
                     /locus_tag="VGA78_11565"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX9894555.1"
                     /translation="MAQGPEVDVGEIVLHHTADSYSFGLEGIFHNRLVLHWEKWPDLH
                     LGPLTLNLTPTKHVVFMILAAVLVFLTLWIAGRSLKRQRAGEVAPKGFAAAIEGLVLF
                     IRNEVAIANIGEGGARFAPFIVTLFFFVLYMNLLGLVPWGASPTGNLAITGGLAILTF
                     LIVEVGGFIKLGPKGYLRTIFMEVPGIHGPAGVVMAIGLAPIEILGKLVKPFALAVRL
                     FGNMTAGHFVILSLFGIIFLFGHLPTWNYAIGFATAALVTGIMLLELFVAVLQAYVFA
                     LLSSVFIGMMQQEHH"
     gene            complement(15035..15385)
                     /locus_tag="VGA78_11570"
     CDS             complement(15035..15385)
                     /locus_tag="VGA78_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894556.1"
                     /translation="MIGRPTGRWMGVPLVILAALIAGGFSGWPGAFAAGGFGLLASLI
                     QLAAGHLMAGQREASLQQFLKRCGAGMGLRLLGVVIVGVVVWLEPEALPPVPAALGYI
                     GVLIPLLFLEARRI"
     gene            complement(15393..15647)
                     /locus_tag="VGA78_11575"
     CDS             complement(15393..15647)
                     /locus_tag="VGA78_11575"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX9894557.1"
                     /translation="MSNPGPRGPDKGLALGQKYFAAGLRFAGGIVLFTLGGFGLDRWL
                     NTIPLFTIAGTLAGGTLSFLSVYRQLVQDKDVDADGPAKR"
     gene            15828..16835
                     /locus_tag="VGA78_11580"
     CDS             15828..16835
                     /locus_tag="VGA78_11580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015352718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9894558.1"
                     /translation="MTTTTTQPDDVQQLARLATAVRDLRGQVSQRIVGQQDVVDGVLT
                     ALLGAGHALLVGVPGLAKTLLVQTVAEALDLSFSRIQFTPDLMPGDITGTEIVEEDPA
                     TGKRMFRFIHGPVFAHVVLADEINRTPPKTQAALLQAMQEHQVTAAGRTYRLPDPFFV
                     LATQNPIEQEGTYPLPEAQLDRFMLELRVGYPTRDDEEMIVEQTTGAIRVHIRSVLDA
                     QTLHGLQDLVRRIPVSKGLIRAAVKLVRMTRPGDAESPEFIRQYVEWGAGPRASQYLV
                     IGAKARAALDGRPMADLDDVRTVAMSVLRHRVVANFAAEAADRTNEDLVAELLASSWD
                     R"
     gene            complement(16942..17853)
                     /gene="rnz"
                     /locus_tag="VGA78_11585"
     CDS             complement(16942..17853)
                     /gene="rnz"
                     /locus_tag="VGA78_11585"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HEX9894559.1"
                     /translation="MLSVTFLGTAAACPTVDRNVSALAVQREGETLLFDCGEGTQRQM
                     MRYGVGFSFREIFLTHYHSDHILGVTGLLRTLGLQDRQESITIYGPRPAARIVGALIG
                     VGIERTRFPVEIVELLPGDRLRRAEYDLAVFQTDHRPDTVGYALVEHIRKGRFNPERA
                     RELGIPEGPLWGKVHRGEAVTLPDGRTLGPEELVGPPRPGRTLVYSGDTRPSPRVIEL
                     AHGADLLIHEATFGEDESQRAQETGHSTAREAAEVARMARVRRLVLTHISARYTREAP
                     ELLEEAKTVFPETVVARDGMVVEVPYI"
     gene            complement(17884..18771)
                     /locus_tag="VGA78_11590"
     CDS             complement(17884..18771)
                     /locus_tag="VGA78_11590"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX9894560.1"
                     /translation="MDLHYRQEITVGALVLVGVAVFVLGSMWLSGRELDTRNRPVLVE
                     FTDVGNLKQGNPVKVSGVQLGSVQKIEFVDVGRVLVTLSVDPRIQPRTDAAVQIGSIG
                     LIGDVVILFHPGQAAEPLPPGGVLKGTAASGFMDLGASLGDEARLTMTAFRELANKQL
                     ADDIHKTLTSLQRLADAYSNTRTGPVAEITATMTALQGLSARIDTALQGPALERALTG
                     MDSVSMKVGRLTDQFAGTGARLDSLLIRINRGEGTLGRIATDTILYSQLTALSASLKA
                     FVDDLRKNPGKITVQFRIF"
BASE COUNT         3226 a         6371 c         6143 g         3118 t
ORIGIN      
        1 atcgcggaac aggggcagtc gtgagccgcg ggtcagcggg cctcgctctg cagccatatg
       61 acgtagcgct gcaccaaccc ggagaagatt cgctgaatgc cgggcttgac ctccggaccc
      121 gcgtcttccg agggcggaga cgtattgaaa ttggcgatga tcccggttcc actctcggga
      181 tggagccaga aaaaggaccg gaacccggcc tggcttccgg tgtgaccgat caaccggacc
      241 ccgcccgggt attcggtgat gaagaacccc aggccaaccg aggcccgctc cccgttcccg
      301 gcacccggct gcccgaccgg tatcacgggg cgccacatct cctcgagagt agagcgccgc
      361 accaggcccc cctggccacc cagcaggaaa cgcaggtact tcgccatgtc ggcgagcgga
      421 gcattcaacc cgccgttgga ggtggtgatc ccggtatcga agtcgatgcc gttggcctgg
      481 gtcttcccat cgatcaggta gtagttattg gcccgctgag cccgcaagtg atacggggtc
      541 acatcgtaat agctggagta catccccagg gggtcgagca ggttcttgtc ggcgtagacc
      601 tcgtactcgt caccggtcaa gcggcggatg gtctcgccca gaaagatgac gcccgggttg
      661 gagtactgat agcgggagcc gggcggaaac aggatctccg tgtacggcag catggccacc
      721 acctgactcc attcggtggg ctcgaaggga tgccaggcct ggtcaccgcc ccagggccag
      781 gtgggcgagc gaaagccgga gctgtgagac agcagctgcc ggagggtgat ggcctccata
      841 ctgccgtacc ggttgtgcac tgcccgcagt tccgggacga acttgacgat cggatcggcg
      901 agcgacaaca gcccccggtc acgcagctgc atcacgccga tggcggtgaa ggtcttggtg
      961 atcgaggccc aatgccagat ggtcgcgccg gtgaccggcc ggccttggtc ccggtcggcc
     1021 aggccggcga acacgctgtc gatgacgccg gtgcgtgcca ccagatacat cccggcgccg
     1081 acgattccct cttcggccac cgacagggtg aagaaccgct tgagctcctc gcgtggagat
     1141 ccactctgag ccgcgacagg tggtagccag gcgccaccga gggcaagcat gagagccgcc
     1201 cgcctgcccg cccgtccgcc cgcccgccta ccgccgcaga tacgcatcgg tcccccggag
     1261 ccagtcttcc cgcggcgggc tgaacacgtc cacatcgagg gtgtcttcca gcgccaccgc
     1321 ctcgtgcggc aggttggaag ggatcaccag aacctcgccc gaacgaacca ccaccgtgcg
     1381 gccccggtcc gcgcccaggg tgaattccag ggcgccgtcc aggatatagg tgagctgttc
     1441 attctcgtgc tggtgcatcg ggaccaggca gccccgcttg aggtacacat gagccagcat
     1501 catgcgttca gcggtgatca gtcggcggtc gagcaggtcg ttgacccgct ccctgggcat
     1561 gtcgtcccag cggtagtgag tgcagtcggt tggcatggcg gaaatctaag tcggcttagt
     1621 tggcgaccgc gggtggctcc ctcagccagt ggtcgaacca ctgccggagc cggcccagcc
     1681 ggtcgaccag cagccagggt tcgccggtgc gggagagatc gtgggtggag cgggggtagc
     1741 gcacgaactc caccggcgtc ccctgcttct tgagtcccag gaaccactgc tccgcgtcgg
     1801 tcatgggggt gcggtgatct tcttccgact gcacgatcag ggtaggcgtc ttcactttgc
     1861 ggatgtagcg aagcggcgac agcgagtcgt acaacgccgg gttgtcccat ggcttgccgt
     1921 agaactcgaa ctcggtgagt ccttgcgcgt cggatgaccc gtaccagctc caccagttgc
     1981 tgatcatgcg atcggcctgg gccgccttga aacggctggt cttcaccgtg acccacgcgg
     2041 tcatcacacc gccgtaggag ccgccggtca cgcccatccg ggtcgagtcg acatccggac
     2101 gccgcgccgc gatgtccacc gcccgcatca gatcctcgta gtcctccgcg aaccagcggc
     2161 cccgggtggc gaaggtgaag tccgctccgt agctgctgga cccgcgcggg ttggtgaaga
     2221 gcacccagta tccggccccg gccagattct ggaattcgtc gaaccagttt tcgccgtagg
     2281 cgccgtgcgg gccgccatgg atgtacagca ccagggggaa cctcttgccc gcctggtagc
     2341 cgaacggccg catcaaccag ccttcgatct ccagaccgcc gaccgatttg taggtgaacc
     2401 gctcggcgtc gctccaggcg atctcgcggt tcagcgcgtc gttgaaagac gagagcttcc
     2461 gctccccgct gccgtcggca ttggctacga acacttcggt gggctgggtg agactggagg
     2521 cgacgaaggc cacccgccgg ccggccgggt ccaggttcca gccgttgatc cggcggcggg
     2581 cgcccagcag ctcggtcatt tgcctggtgg ccggatcgag tcggaacaac gcggtccgcc
     2641 cgccgatgga ggccccgacc agaatggcgc cgtccgggag gtaactgtag ttgtccggct
     2701 cgaactgcca ggagggcgtc agattctcga cctcgccccc ggcggacgga acccgcatca
     2761 gtcgtgcgtt ggccatccgg gtggcccggt gcacgaagct gagatacttc ccgtcgggcg
     2821 accactcgag gttgacctcg acacccatca accgagctac ccggcgggcc gtaccaccgg
     2881 ccgccggaat cacaaagatg tcgcgttcat tccggggggc ttcgtcccgc ttggcgttgt
     2941 acggcaaccg cgccaatgaa tcgcgtacca cctgcgccgc ggagtcggcc cgcagctccg
     3001 aatcggcggt gaaggcgatc caccgcccat caggggagat ctgcacgtct ccgtgggagt
     3061 acccgtccat tgtgatctgg cgccgaacat tgccgtccag ctgctgcacc cagatctggg
     3121 ccggccgcca cacccgggcc gtactacggt tggccagata gccctggccg ttgcctttga
     3181 tgggccagtc cacgtaatgg cggccgtcaa agcgggccgg gtccagtggt ttggtgatcg
     3241 cgccgaaggg gggacgggct tcggctttca tcttcgagta gggatcgtcg gcccggccgc
     3301 cactgctgtc ttcccgcacc ggttcgctcc aggccaacag ctttcgatcg gcgctcaccg
     3361 acccggccgg gatactgtca tactcgaacg cttctccacc cggcgcgtcc atccgcaagg
     3421 cgaaagtccg ccccttggcc cccggacggg tcgaggtgaa cagcaggagc cttccgtccg
     3481 gcgaccagcg cggattgctg ctttccaccg agggcgaagt gtagcggact ggagcgcccg
     3541 cttcgctgcc tcccacccag atttcggagt gccgcttgtt ctcgccggtc acgacggtgg
     3601 tgaccgtgaa cgcgaccagc cggccgtcgg gggaaatcgc gggcgaactg acgttggtga
     3661 cccgatacca gtcgttggga gtgaagcccc gcccttgctg ctgggcggcc gtcattccgg
     3721 gtaccagggt gagcacggcg aggaccagag tacgtgaggt catggcaagc ttccgatgtg
     3781 atggtcaggg tctgacctga ttatacgcgg gcggggaggt cctcgttacg aggccccttt
     3841 ggtagcatcc cttttccccg ccgcgggcgg gcagagctga tcaaacgtat cgaagctggt
     3901 aatcacccac agcacatcgg cggcttcggc ccgggatacg tctcggcgaa gggccccggc
     3961 ttccttcggc cttcgtgcca gatccaccac gccctcatgc cggccggttt ccaggcgggc
     4021 ggctcccgcg gcccgcctcc aacctgacgc cgtcgggaat cggcgggtga accgaggccg
     4081 atttcacccg cgccatccga gaaggaaagc gacccgacgg atcagtgctc gacgagttca
     4141 tgccctggaa ggtctaccgc aacatgtccg accaggatct acgggctctg tggctctatc
     4201 tgcaaggcgt gccgccccgg gagttcggca acaaatagcg tacccgcgct aattccgcgg
     4261 acaggttaaa agcgcgcggt cgacgggacc cgtcaggatc actaacatcc agatcaccca
     4321 atcgtcagac ggtcatagag ctggattacg ttgatcgctt gagggagacg aggatgaaac
     4381 aggtctggtt gttggctgcg gtcttgaccg cggggacggt cggcgcccag gcgcaagccg
     4441 atcctccgcg cccgtcgcgg gaggagcgac tgaaccggcg tcattgggaa ggcctgggac
     4501 tcaccgagga gcaacgcaat tcgttgcggg ccctccgcga ggaacggcgc accgccctgc
     4561 ggcagagaat ggcggagacc caggaacgga tgcgacgagt cctcaccgag gaacagcggc
     4621 accgactcga ggcgctgcgc gagtctcggg tacaccgcga ggagtttcgg cggaaccggt
     4681 tcggccggga tgaggcccgc cgggagctga tccgacggga gttcctccgc cgacacgatt
     4741 tccgacagga tgcctggaga cgcgatttca ggcgaggccg ctgggaacgg ctccagcggg
     4801 aacgccggct gcgggagcgc tactggcgcg actgaaccga agccgggtcc gccagcgccc
     4861 atcccggcag gtccgacaac caggcgaagg gcgggaagcg gtcggcgccg acccggcggt
     4921 gcaccacggc gttattccgc ggattgaaga gccagatcgc cggcgcgtcc gcgttcaggg
     4981 tctgcagcgc ggtacgccag taactccggg ctcgcgcgct atccgcctcc gacacggcca
     5041 gagcaaacac cgaatcgaac gcggggctgg cgtacttccc gtagttcaag ttcccccatc
     5101 cgccgcgagt ccactggtcc gtgagggagc gcgggtgcgg ctcatcgagc caggagccga
     5161 tgtaagtatc gaatcgaccc tggcccagcc gttcctggaa caccgggaaa tccacgacgg
     5221 tgacggtcgc ctgcaccccg agccggcgcc agcgctcctg aatcgccgta gcgaggctcc
     5281 ggcggggggc gctggttccc ggcaccagga tgtcaacggt gagagagcgg ctttgttgcc
     5341 gccgtagtcc atcccggccg ggggtccagc cggcgctgtc cagtagcctc acggcggccg
     5401 cgctgtcgcc ttcggccccc ggcggcgttt cccacaacca caactgggcc gagagcggac
     5461 cgttaggcac cgcggttccc ggaccgaata tcgcccggac cagcgtttcc cggtccagcc
     5521 ccagcgtgag cgcccggcgc acccgaacgt cgttccatcc gccccggcgg gcgaagttga
     5581 atcccaggaa gccatacacg gccgatgggt aggagatcac cttgaggtgc ggcgcccgag
     5641 acacctcggc cagacgcgcc tgatcgggca gcgtctcgac cagatccacg tcaccggaaa
     5701 gcaccaggtt ggtgagcgca tcgggcccct gggcgaactg ccaggtgatc cggcggatcg
     5761 gggccgaagc ggagaccgct tccagggtca ggagctgccc ccgccgccat tccgccaccc
     5821 gatacggtcc cgatcccgtt aggcgggccg ggtcggccga ggcaccccag cgatcccgcg
     5881 gtaccgaatc ccagacatgc cggggaaaga cccggacgtg actggtcgcg tcgtagagct
     5941 ggtcgggacg atacgactgg aaggcgatcc gcaccgtgcg gtcgtcctcg gtggttgcgc
     6001 gcaggtccga cagggcggcc cggttggccg catccagggc cgagtcctgg tgggcctcga
     6061 atgagaacac cacatccgag gcggtgacgg ccacgccgtc ctgccagcgg gcgtcgggac
     6121 ggagatgaaa caaccaggtg agggaatcga cccgttccca gcgctccgcc aggcccgccc
     6181 ggtaggcggt gctgtccagt ggggctcgga ccgggtcgag gatcgccagc cgttcataca
     6241 ccagatcgcc gatgtcgcgt cccacgctct gccagacgaa gggtgacaag aggtggtccg
     6301 gctcccccag cgcggcgatc accagggttt cacagcgggg acagtccgcc ggtttcccgc
     6361 aacctcccag ggccagggtc agcgccaccg cggcagcgac caacctgggg cctcggaggg
     6421 gtgggttcat ccagatctcc ctgaagcggt agccctggtc cattcccgat cggcccaccg
     6481 gctcaaccga tcggcgccga gccgctccag cgcatggcag gaacgccggt gcagcggctc
     6541 ggcggtgcaa tcgtcaccca gcgcccggaa ggccagcgcg gcaatcaccc cacattccgc
     6601 ggccaggatc ctggccccca gaagctcggc cttctctcgc gccgccgtgg cctcgatctt
     6661 ggcaagttga tactgtcgcg cgcggagcgc catgagcgcc ctcaatcgcc ccgcgttcac
     6721 cagaccggtc tggtcgtcgg acgcggtcgc gatctgggtc gcctgctcca gcagcgccgc
     6781 ggccctatcg accgccccct cggagaactc cagctccgcc tgccccagca ccaccaaacc
     6841 cttgagcgac gggtcgctca cctggtctac cagtttcatc gcgagggcca cgtggtcatg
     6901 ggccgcgtgg aggagcccga gctcgcgata ggccagcccc aagttgtgat gggtctgcac
     6961 cgctccccgg gtatcctgca gctcctcata caatctgagg gctcggcgcc aggtctcgac
     7021 cgccaggtgg ggccgcccgc gcaggtgcgc gatcagcgcc aggttgttcc aggctctggc
     7081 tccgatgccg gcgtcccgga tggcctcggc caggcgttgg gcgtctctga accagcattc
     7141 ggcatcatcc agccgaccct gctcgaagga gactcccccg agaagattga gcgcatgcag
     7201 ctgcccgccc cggttgctca cgtccacgaa acgacgcagc gccgagccgg ccagccgcgt
     7261 cgcgcggtgg tattcgccaa cccgggcggc agccatcgcg agatggaatt ccgcttcggc
     7321 gctctggtgc cgggtgtcct ggtcgccttc gaagcgggaa agcgcctctc gaaagcggcc
     7381 ctgcctcact aagttctcca actcgccgcc gggaggcgtc gtcgggaagt ggatggtcag
     7441 gcggctatcc tcgccggctc tcgaaccgca gtctcgaagg cctccagcac gtcggggcgc
     7501 caccactggc gggattgcag catccggctc accgcggtgt catggctcat agcaggacga
     7561 tagctgcggg tcgtggtcat ggcgtcgtac acgtccacga tgcagagcac ctgcgcaccg
     7621 atcggaatgg cgtccccaac caggcgatcg gggtagcccg agccgtcgta cttctcgtgg
     7681 tgggagcgaa tgaggggctt gatgtcccag gggaactcga cgtcctccag cagctccacg
     7741 ccccagacag ggtgctgctt gatgacctcg aattcttcgt cggtcagtcg gccgctcttg
     7801 ttcaggatct cgtggggaac ccggatcttg cccagatcgt ggagataggc ccccagctgg
     7861 atcgtggtcc gggtggagtc gtccaggccc agggcttgcg ccaccgccag cgcgtaggcg
     7921 gccacccgct cgcaatgtcc gtaggtgtag ctgtcggccg actcgatgga ctgtccccag
     7981 tcacgcacga cgcccagata ggtgtgctcc agcttctcac gcttgcggga gacatcgacc
     8041 agatcgagcc gggcgtccaa gccggagaag aggcggtagg ccgccgtgag gcgcgacagc
     8101 gcttcctggt tccggcccat ggcctggtac accagcgcca gctcgcgggt cgcctcggcc
     8161 tggctcagca tggacccgca gccggcagcc aggtcctggg cggccttgag ccgcgattcg
     8221 gccaacggga ggcggcccat ttcgcgatag accatcccga tgacccgata ggcatcggcc
     8281 ttgtcgagct tggacccgat ccgctcgaac gcggccaacg ccgcgtcggc gttctccatg
     8341 gcccggtcaa actgctgccg cgccaaatag acctcggagt ggttcaggga acagagcgcg
     8401 gcgagatgat tgtcactcag gtgaaccgcg atctcacgac tgcggcggta gtaccagtcg
     8461 gcctcatccc agtgagagca atcggcgctc agcatgccga gattgtggaa ggccagcccg
     8521 cagccggcgt catcgccgat gttctgatag gcctcgaggg aacggtgata gtgctgcgcc
     8581 gcggaatcga gatcaccctg gatattggcc aggatcccca ggttctgctc gatccgggcc
     8641 cgcagcggct tgtgctggcc gcccagcctg agggcccggt cgtaggtgcg ccgggcctgg
     8701 tcgatccggc cggcttcaaa atcgaaaccg gctttcacat tgagggcctc ggccgcgccg
     8761 atgtcgtctc cactccgacg ggccagggag tagctctgcc ggaacagggc atcggcctcg
     8821 ccggtcttcc cctgatgatg ccgcagcacc gccagccgcc ggagcgcccg caccaagacc
     8881 acctggtcgg attccgtgct ggcggcgtcg atggcgccaa ggtagcggtg agacgcgtcg
     8941 acggtagcgc ccgaacgctc gagcgcctcg gcctccccca gaaggcgcgc ggcgctcggc
     9001 acgggcgtgc tgctgctggc tgacagagtc agtccactgc ccgctaccag gccacggcgt
     9061 agcgggagaa gtgatccagc ggtgcgctca ccgtcttgcg tagcggcgcg tcgagcgact
     9121 ggaggatctc gaggagactg agcgattcgg tggtgtagac gatgcgcttc ggcagcagga
     9181 tggcgaggtc gcagttggca tagctcatcg tgaggtttgc cttgaccgca aaacgcaacc
     9241 cttccggagt aaaccggatc gagttgaccc gctcgctcgg cgccacggcg gtgatcgtca
     9301 ccggccgcga cagcgcgccc ctcggaatct ccagcttgtg gggaccgatc tgcatgaccc
     9361 cacccgacgg cccgatggtc tgcaccacct cttggtaggg gagcggtgta cacaggagca
     9421 aggtagcctt gagcctctgg gtcactccgc ccagagtccc acccaggtcg cccaggagcc
     9481 ctggctgcat ggccggcggc tgggacgcgg tgggggcgtc caggtcgctg cagccaatca
     9541 acgctgccac cgacaagaag gcgaacgtga gtttcgacga ccaacggctg ccggtcattg
     9601 caacgctcca tccctgggtt attgagctga cgcgctactt ccggcgccga agggaggcag
     9661 gggccatgcc aatcatgaaa gaagggctgt gaagaaagat tacatatcct cacgaccatg
     9721 cctcataacg tgttaccata caattgctta tctactagtg tgattcagat gaacgtacgg
     9781 ctctttgaca gggcagcttg tgctcaagcc atggtggagc cgggtacggt gccgaccgat
     9841 tgagacgact tgtcgaaccg gcgcagcggc tgcactttgt atacaatcct gaatgtattt
     9901 ggcactcctc gttttcctgc aggttccgga gcccggcgtc ctgggctctc agctgccgct
     9961 tcatcgcaac cgccggatag cccccgctgt cgccgcggtt cgggccgcgg cgccccgaat
    10021 ggacgggatc ctcgacgacc ccggctgggt gactgcccat cccgtcacgg agttccgccg
    10081 cgatgtgccg agcgacggtc tgccggcgac cgaaggttcc gagattcggg tgttatacga
    10141 cgaccacaac ctctacgtcg gggcacggct gttccaccgg gaccgcgccg gcgtgtcccg
    10201 gcggctgagc cggcgcgact cgttctcggt gttcaacgac gtctttttcg tcctgctcga
    10261 ctcgtatcac gatcacagca ccgcgttcgt tttcggggta accccggccg gcgagcggcg
    10321 ggacgcaatc cagagcggcg acggcgccac ccttgacgcc tcgtgggatc cggtctggga
    10381 ggcgcgcacc cgggtcgact ccctggggtg gaccgtggag atgcggattc ccttctccca
    10441 ggttcgcttt ccgaacgtgc cggagcaggt ctggggcgtg cagttccgcc gcgatatccg
    10501 ggcggccggc gaggccgtgg actggtcctg gtcgccccga accgagtccg ggagcacttc
    10561 caagtacggc cacctgctgg ggctgagccg gatccctcaa ccgcgccgga tcgaggcggt
    10621 cccctacatc ggggggcagt ggcgcttcac ggaaggggcc gatccgtcca atccattcga
    10681 cgacggttcg gtgtaccaga ccacggcggg tctcgatctc aagtatgggc tcaccagcaa
    10741 cctgaccctc gacgcgacca tcaatcccga tttcggccag gttgaggctg accccgcggt
    10801 ggtcaacctc accgccttcg agaccttctt cgaggagcgc cggcccttct ttgtggagcg
    10861 ggccgacctg ttccggttca ggtcctccgg cgcgcagaac ttcttctatt cgcgtcgcat
    10921 cggccgcgcg ccgtcgcttt cagccgaggg agccgcgcct tacaccgacc agccgggggc
    10981 gacgactatt ctgggcgcgg ccaaggtgac cggacggact tcgtcgggct ggtcggtcgg
    11041 cctcctggaa accgtcgcgg cgaaggagcg cgccgagctg gcacggcccg gcgaagccct
    11101 gcccgcggtc ggagtggagc cactcagcaa ctatgccgtc gcacgggtcc ggcgggagta
    11161 taccggtggc tcgagcttcg tcggcggcat tcttaccgcc gtcaatcgcc ggctggacga
    11221 gccggagttc ggtctgctcc gctcggcggc ctacagcggc ggcgtcgatt tccagcatcg
    11281 ctttcgcggc aacgccttcg agctggaagg gtcgcttggt ggatcctgga tccgcggctc
    11341 cgaatcggcg atgctggcgg ctcaagccgc tccggcgcgg tactaccagc ggcccgatca
    11401 ggactatgta agtctggact cgaacgcgac caacctgggg ggcacggcgg gcaacctgat
    11461 cttccgcaag gccggcggcg attggcggta cggcgtaagc gggagctaca cctcacccgg
    11521 cttcgaggtc aacgacatcg gcttccagac cgaggccgat cggatccgat tctcgggatc
    11581 cctcgagcgc ctctggctca ccccggggcg gctgttccgt tcgttctcga gccaggtctt
    11641 cctctcgcag tggtacaact tcgggggaac caacctgaac cgggaggtga acgccgtcgc
    11701 gcaaggcagc ttcctcaacc tgtggtcggt ctttgccgaa gccggcggga atttccagag
    11761 ccgggatgac cgggtcactc gcggcggacc gctcggcgtc cggccggccg ccgcgtacgt
    11821 ggccctgggc gccgccagcg acagccgcaa gtcgctccgg ggggagttga ccgcctggta
    11881 ctcctggagc gaggtcggcg gctggggctg ggcactcgat ccccggatca ctttccgacc
    11941 tcaaggcgcc ttcgacctga ccctccagat gtcctggcgc cggaaccagg cggatgcgtt
    12001 ctacgtcacc caggctccgg accctgcggc cgctgccaca ttcggcgggc gctacgtctt
    12061 cggctcgctg ggccagcagt cgctcaatac cacgcttcgg ctcaattggg tgctgagccc
    12121 caacctgtcg ctgcagtggt acgcccagcc cctccttgcc actggagact acaacggctt
    12181 caaggcgctg gagcggccct cagcctaccg gtttcagacc tatggggaga acgcatccac
    12241 cctcgacttc gatccggaga cgctgcaata caccgccgac gccgatgggg atggacccgc
    12301 cgtgccgatc cggttcggca atccggactt ccggatccgg tcgcttcgga gcaacgtggt
    12361 cttgcggtgg gagtaccgcc ccggctcgac tctcttcctg gtgtggaacc acaaccgcgg
    12421 gtcgcagatc ttcgacccga gctggggcgg actggacgat ctctggggac tcagaaccga
    12481 cccgcagcag aacatcctgc agatcaagct gaattattat ctgaaccgat agtggaagcg
    12541 ggaaggacct atcgaaccag gtgccttcgc agccgggtaa tccgccgctt taccgagccg
    12601 tcgagcaccc gatcgcccag ccgcaccacc acacctccca ggatctcggg atctaccgtc
    12661 cagcgcggca ccacttcctt gccgagccgc tcttccaggg tccgctggat tcgagcccga
    12721 agctgctgat cgggttcgcg cgccaccgtg atgccagcgc gaacccggtc gagcttgaga
    12781 tcgagcagac tcatgtattc gaccgccatc gcgggcagca ggccctgccg gccccgcttg
    12841 atcaccgcgg ccaggaacag ccggaactcc tgcggcgacg cggagacggc ctcatccagc
    12901 aaccggatct tgaccgcctt ggtgaccttg ggagagagca agaccgccgc tacctcgggc
    12961 gaggtggtga tggcaccagc gatcgcatcc agcaggtcgg cgtattcgcc ggtgcggcca
    13021 ctcttctctc ctagcatgaa cagggcctcg gcgtagttgc gggcgatcga ctcggctctc
    13081 aatgcttgat ctccaccgag tcgaggtact cggtcaccag tttccgatcg gtctcggagt
    13141 ccatccgctg ccccaccagc ttggcggcgg cggccagcga gagatccact gcctcccgcc
    13201 ggagcgaagc gagggccttg tccttctcgg ccccgatctc gcgccgcgcc cgatcgagca
    13261 tatcctcctg ctcgcgcttg gcgcgctcca gcagcgcggc ccgctcctgc tcggccgtct
    13321 ggcgcgcgtc ggtgagcatc tgctgggccg acgcgcgggc ctcagcggca aagcgtttgc
    13381 cttcctccag cgccgccttg gcctcggcgt gcgccgtctg ggcctcgccc agctgacggc
    13441 ggattttgcc ttcccgctcc tcggtcgcct ggacgatggc gggccaggcg aacttccaga
    13501 gcagagccag cagcaccagg aacacaaccc aggtccagaa caccagtccg aactcgacct
    13561 ggaagggccc catgccccca ccctcttcct gcggggccgc cagcaccgcg agccacaccg
    13621 cgttcatggc ggcctacttg atgagcttga agaggagggc gaacaccagc gcgataatgg
    13681 tggcgccttc cagcaggatc gcgatcagca ggccggcgcc gcggatttcg ccagcggctt
    13741 cgggctggcg cgcgatggct tcggccacct ggccgccgat ccggcccagc ccgatcccgg
    13801 cgcccaggat ggcaagcccg atgccgatgc cggcgccgag cagcgcattg gcgttcttgg
    13861 cggcttcggg agtgagagcc gcttcctgca ggagcgtgag caagttcagc attctggttt
    13921 tctctctgtc gttgggagaa tcagagccat cgctccgccc gtcgcccgcg accgtttctc
    13981 cctaccagtc gccgcttcgg tgcccgctcc cggtcgcaat gaccagcggg cttccccggc
    14041 gcattcggcc gggtaccagg gatcagaatg cggtgcgggt tccgacccct tcaatcagtc
    14101 ggtcagtcgg tcagtcgggc agtcggtcgg cctgacggac cgacggaccg acggaccggc
    14161 tagtgatgtt cctgctgcat catcccgata aacacggacg agagcagcgc aaacacgtac
    14221 gcctgcagca cggccacgaa cagctcgagc agcatgatcc ccgtcaccag ggcggccgta
    14281 gcgaatccga tggcgtagtt ccaggtcggc agatggccga acaggaagat gatcccgaac
    14341 aacgacagaa tgacgaagtg gccggcggtc atgttgccga agagacgcac cgccagcgcg
    14401 aagggcttca ccagcttgcc caggatctcg atgggcgcca gtccgatggc catgacgacc
    14461 ccggcgggcc cgtgaatccc cgggacttcc atgaagatgg tgcggagata gcccttcggt
    14521 cccagcttga tgaacccacc cacctccacg atcagaaagg tcaggatcgc gagcccgccg
    14581 gtgatggcca ggttgccggt aggggaagcg ccccagggca ccaggcccag cagattcata
    14641 tagagaacga agaagaagag cgtcacgatg aagggagcga accgggcgcc gccctcgccg
    14701 atgttggcga tggcgacctc gttccggatg aacagcacca ggccttcgat ggccgccgcg
    14761 aaccccttag gcgccacttc gccggcccgc tgtctcttga gactccgccc ggcgatccag
    14821 agggtgagaa agaccaagac cgccgccagg atcatgaaga cgacgtgctt ggtgggcgtg
    14881 aggttgagcg tcagggggcc caggtggagg tcgggccact tctcccaatg cagcaccagc
    14941 cggttgtgga agatcccctc cagcccgaac gaatagctgt ccgcggtgtg gtggaggacg
    15001 atttcgccca cgtcgacttc gggtccctgc gccatcagat ccgtctcgcc tcgaggaaga
    15061 gcagaggaat gagcacgccg atgtatccca gcgcggccgg caccggaggc agggcctcgg
    15121 gttccagcca gaccaccacc ccgacgatca cgacgcccag cagcctgagc cccataccag
    15181 ccccgcaccg cttcaggaat tgctgcagcg acgcctcccg ctgtcccgcc atcaggtgac
    15241 cggcggcgag ctgaatcagg ctcgccagca acccgaaccc gccggcggca aacgcgcccg
    15301 gccagccgga aaacccaccc gcgatcaggg cggccagaat caccagcgga acgcccatcc
    15361 accgcccggt cggacgaccg atcacgaacc gctcaccgct tggcgggccc atcggcatcc
    15421 acatccttgt cctgaaccag ctgccggtac acactcagga agctcagcgt ccccccagcc
    15481 agggtgcccg cgatggtgaa aagcgggatc gtattcagcc accgatccag cccgaagccg
    15541 cccagggtga agagcactat cccaccggcg aaccggagac cggccgcgaa gtacttctgt
    15601 cccagagcca ggcctttatc gggtccccgg ggtcctggat tgctcatggc gcccaaaacc
    15661 tatgcgcttg tgaaatattt cgcaagcaaa cattacccta cctctggcgt acggaagtgg
    15721 gctactttgc gacagcgtag gaagtcgttt ggccagcagc aggcttcgac cccttcgacc
    15781 ggccttcgac cgccttcgac ccccttctgc ccgcttcgac cggtgaaatg accaccacga
    15841 cgacccaacc cgacgacgtt caacaactgg cccgcctggc gaccgcggtc cgcgatctcc
    15901 gggggcaagt cagccagcga atcgtcggcc agcaggacgt cgtcgacggg gtgctgaccg
    15961 ccctgcttgg cgcggggcac gctttgctgg tgggggtccc gggtctggcc aagactctcc
    16021 tggtacagac cgtcgcggag gcgctcgatc tttcgttcag ccggattcag ttcacccccg
    16081 atctgatgcc gggtgacatc accggcacgg agatcgtgga agaggatccc gccaccggga
    16141 agcggatgtt ccggttcatc cacgggccgg ttttcgccca cgtagtgctg gcggacgaaa
    16201 tcaaccggac tccccccaag acccaggccg cactgctcca ggccatgcag gagcatcagg
    16261 ttaccgccgc aggccggacc taccgcctgc cggatccgtt ctttgtcctg gcgacccaga
    16321 atccgatcga gcaggagggg acctaccctc ttcccgaggc ccagctcgat cgcttcatgc
    16381 tggagctccg ggtgggctat cccacccgcg atgacgaaga gatgatcgtg gagcagacca
    16441 ccggggcaat ccgggtgcac atccgctcgg tgctggatgc gcagacgctg cacgggctgc
    16501 aggacctggt tcgccggatt ccggtttcca agggactgat tcgcgcggcg gtgaaactgg
    16561 tgcggatgac ccgccccggt gatgcggaat cccccgaatt catcaggcag tacgtggagt
    16621 ggggagccgg accgcgggct tcgcagtatc tggtgatcgg cgccaaggcc cgcgccgccc
    16681 tggacggccg gcccatggcc gatctggacg acgtgcgcac cgtcgcgatg tcggtgctgc
    16741 ggcaccgggt agtggcgaac tttgccgccg aggcggcgga ccggaccaac gaagacctgg
    16801 tggcggagct gctggcttca tcctgggatc gttaaccccg gtcgaaggcg gtcgaagaca
    16861 gtcgaagaca gtcgaagacg gtagcacccc ggccggcttc gaccgccttc gaccgtcttc
    16921 gaccgatttc gaccccttcg actagatgta tggcacttcc accaccatcc cgtcccgcgc
    16981 caccaccgtc tccggaaaca cggtttttgc ttcctccaac aactcgggtg cttcgcgggt
    17041 gtagcgggca ctgatgtggg tgagtaccag ccgccgtacc cgggccatcc gggccacctc
    17101 ggcggcttct cgggcagtac tgtggccggt ctcctgggcg cgctggctct cgtcctcgcc
    17161 gaaggtcgcc tcgtgaatga gcaggtcggc accgtgggcc agctcgatga cacggggact
    17221 gggccgggtg tctccggaat acaccagggt gcgccccggc cggggcggac ccaccagctc
    17281 ttccggcccc agggtgcggc cgtccggcag cgtcaccgct tcgccccggt ggaccttgcc
    17341 ccagagcggt ccttcgggga tgcccagctc gcgagcccgc tccgggttga agcggccctt
    17401 tcgaatgtgc tcgacgagcg cgtatccgac ggtgtcgggc cggtgatcgg tctggaagac
    17461 cgccaggtcg tactccgccc ggcggagccg gtcacccggc agcagttcca cgatctcgac
    17521 cgggaaccgg gtgcgctcga tccccacgcc gatgagagcg ccgacgatcc gggcggcggg
    17581 ccgggggccg tagatggtga tgctctcctg ccggtcctgc agtcccaggg tccggagcag
    17641 accggtcact cccaggatgt ggtcggagtg gtagtgggtc aggaagattt cgcgaaagga
    17701 gaagcccacg ccgtagcgca tcatctggcg ttgggtccct tccccgcaat cgaacagcag
    17761 ggtctcgcct tcgcgctgca ccgcgagggc cgagacattg cggtcgaccg tgggacaggc
    17821 cgcggccgtt cccagaaacg tcacgctcag catggtgggc caaaaataag tcggaagacc
    17881 cgattagaag atcctgaatt gaaccgtgat cttgccgggg ttctttcgca ggtcgtccac
    17941 aaaggccttg agcgacgcgc tgagcgcggt cagttgcgag tacaggatcg tgtcggtcgc
    18001 gattcggccc agggtacctt cgccccgatt gatcctgatc aggagggaat ccagccgggc
    18061 gccggtgccg gcgaattgat cggtgaggcg acccaccttc attgaaacgg aatccatgcc
    18121 ggtgagggcc cgctcgaggg cgggaccctg taaggcggta tcaattctgg cgctcagtcc
    18181 ctggagcgcg gtcatggtcg cggtaatctc cgccaccggc ccggtgcggg tattggagta
    18241 ggcatccgcc agccgttgca ggctggtgag ggtcttgtgg atgtcatcgg ccagctgttt
    18301 gttggcgagc tcccgaaagg cggtcatggt caatcgcgct tcgtcgccca gggacgcgcc
    18361 cagatccatg aagccgctgg ccgcggtccc cttgagcacc cccccgggcg gcagcggttc
    18421 ggccgcctgg ccgggatgga acagaatcac cacgtcgccg atgagtccga tggacccgat
    18481 ctgcaccgcc gcatcggtcc ggggctggat ccggggatcg acgctcaacg tcaccagcac
    18541 ccgtccgaca tccacaaact cgatcttctg caccgacccc aactggaccc cggacacctt
    18601 caccgggttc ccctgcttca ggttaccgac gtcggtgaac tcgaccagca ccggccggtt
    18661 ccgggtgtcg agctcccggc ccgagagcca catcgagccc agcacgaaga ccgccacgcc
    18721 gacgaggacc agcgcaccaa cggtgatttc ctggcgatag tgcagatcca tgcgcgctca
    18781 ggccgccgca ggccggttgt cgaagtcccg ctcgaggaag gcccggactt tctcgttatc
    18841 cgaagcgagg aattcttc
//
LOCUS       DASWKS010000406         6313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2803515, whole genome shotgun sequence.
ACCESSION   DASWKS010000406 DASWKS010000000
VERSION     DASWKS010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2803515"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VGA78_11595"
     CDS             <1..624
                     /locus_tag="VGA78_11595"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX9894561.1"
                     /translation="QPEAAAEILATHPRLREADIVLLQEMHETAVETIAARLGSGYVY
                     YPAMVHPRVRHHVGNAILSRWPLLEDRKVVLPHLGRIGGTARAAVVATVKVREQRIRV
                     YSLHLATPFEIGHRGIEDQVRAVIQDAAGSPDPVLIAGDFNSSRVGGLLVDAGYEWVT
                     QRIGRTAWIMALDHVFIRGLDLRPVAGTVVEKPIPSDHRPVWAVMQP"
     gene            638..2068
                     /locus_tag="VGA78_11600"
     CDS             638..2068
                     /locus_tag="VGA78_11600"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9894562.1"
                     /translation="MHRSLAVLALLAFACGPVAGRRGNTVILASGADLQSPNPLLTVH
                     PLARQVQRYALLVTLIRYDSLLVPEPYLARSWEWSADSTRLTLRLYPELRWHDGVRTT
                     AYDVAWTLEAARDPATGYPRQLDLAGLTAIEPDDDTTLVLQFAGRQSGIPDVLTDLAI
                     LPEHLLDTVPRNELRRAQWNRRPVGNGPFRFVAHQPNRRWVFEANPEFPAELGGPPRL
                     ARFVIAVVDEPTTKLAALTSGELDLAGIHPGHADFVRRDPNLRVLDYPLLFTYALVLN
                     LRRPPFDRPLVRRALSLVIDRRAIVDGALFGFGTPADGPLPPPLAPDSLKPALFAPGR
                     AIPLLGEQSLRFELLTVGSGEAALEQMLQAQMALVGIRAEIRQLELSTYLDRIQGASH
                     NFEAAVMGVSGDLGLGHLAPLLELTGLGAGADRATRIRLFTDSLPALFLYHARGVQGI
                     NRRVQGVHMDLRGELVTLSHWWVNDR"
     gene            2058..3065
                     /locus_tag="VGA78_11605"
     CDS             2058..3065
                     /locus_tag="VGA78_11605"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894563.1"
                     /translation="MTDSSAPVFHASAPVRLDFAGGWTDVAPFCREERGAVVNAAVEL
                     RAHAVVRPGGDTYRLVSEDLDQALETSGPDALARNGKLDLLKAALRRSGIGPADVRTR
                     SEVPPGSGLGSSGALDVALVAALDAAQGRLRSGVELAEEAWQLETIDAALPGGKQDQY
                     AAALGGFHQLAFEGGAVQVRPLHLAPEFMAELERRTLVCYTGTSRVSSNTISRVMSRY
                     RQGDGGVADALRTLAELARQMGEALQRHDLNRVAALLDENWRQQQRLDPSMRTETMAR
                     LESAMSRAGALGGKAAGAGAGGSMFFILEGDRGVAEQSARDAGATVLPFTWAREGVRV
                     W"
     gene            3062..4213
                     /locus_tag="VGA78_11610"
     CDS             3062..4213
                     /locus_tag="VGA78_11610"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9894564.1"
                     /translation="MKVAGFTSTGSKRPEALFGESEPGLPLRMVQSSGCRVQDANGKE
                     YLDYIMALGSVALGYGHPEVNRAVIDAVQRGAIGPVSPIDEAELAAELGAMIPMIEEI
                     RFLKTGAEAVAAAVRLARVATGRDQVLGCGYHGWLDWCSDNAGVPAPVRALYGVLPFN
                     DVEGTVELIRRAGDTLACVVMEPVVEAPPSGDWLRAVREETRRVGAVLVFDEIKTAFR
                     VGLSGAAARWGGEPDLVVLGKALANGFPLAAVGGSSRIMQLVSRTWISSTMATEFVSF
                     AAARATLRVVRDQNLPERLDRLGSILLAGLKRLAERFPRHIAGVGGIPEMCYLRYRDE
                     EFSQRVAQDCARRGLLFKRTAYNFVSLAHDESALKFALDTLEEVLTTDD"
     gene            4230..5030
                     /locus_tag="VGA78_11615"
     CDS             4230..5030
                     /locus_tag="VGA78_11615"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894565.1"
                     /translation="MLIDVHAHFYHAGCTRSDWAELNASRLRAGERIGITWHVASILG
                     SWGRTSPTYFPSPADVISGNDALLQLMRNHASRIRGYVCVNPNYTEQALAEIHRCLDA
                     GMIGVKLAASRRANDPLLDPVCETARRRSAPILHHIWQHRRHEWRGQEASDAVELGEL
                     AERHPEVPFILAHIAGGGDWIHSLQAVRERPNIFVDLSGSGVDGGMLEACLRSVGVGR
                     LLWGADITLDTGWAKLRYLEQLLPSDQVERIAWRNAAAIFPPGSFVRD"
     gene            5033..5812
                     /locus_tag="VGA78_11620"
     CDS             5033..5812
                     /locus_tag="VGA78_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894566.1"
                     /translation="MRIDVNAFLGPYPFRSHPDTTPSGLLQAMDRVAIQEAWVSHLSA
                     IFWRDPMEGNASLYQTADQHPRLRPVPALHPELPGWPRALAEAAERHAPCVRADPTFY
                     SLPPAGHAMRALAAACGDRGLPLLLAVRLEDGRQRHPHDRAEVLPPSAVRSLIRSDPK
                     VRLIVTHADREFVEEVHFGATPAEAERILWDICWIWGPPEDHLAQLLHTVGVERFAFG
                     SGMPMRLPEASVCKLDLLDLTPAERELLDSGNLRRFGSSAL"
BASE COUNT          979 a         2112 c         2141 g         1081 t
ORIGIN      
        1 cagcccgagg ctgcggccga gatcctcgcc acccacccca ggctgcgcga ggccgacatc
       61 gtcctgttgc aggagatgca cgagaccgct gtggaaacca tcgccgcgcg tctgggcagt
      121 ggatacgtct attaccctgc catggtgcat cccagggtcc gacatcacgt ggggaatgcc
      181 attctgtcac gctggccgct gctggaagac cggaaggtgg tgctccctca cctgggtcga
      241 atcgggggga ccgcgcgcgc ggcggtggtg gcgaccgtca aggttcggga gcagcggatc
      301 agagtctact ccctccacct cgccaccccc ttcgagatcg gccaccgcgg gattgaggat
      361 caggtcaggg ccgtcattca ggatgccgcc ggcagccccg atccggtgct catcgccggc
      421 gatttcaaca gctccagggt gggaggcttg ctggtggacg ccggctacga gtgggtgacc
      481 cagcggatcg gccggaccgc atggatcatg gcgctggacc acgtgttcat ccgcggcctc
      541 gacctgcgac cggtcgcggg aaccgtggtg gagaagccga ttcccagtga ccaccgtccc
      601 gtctgggcgg tgatgcaacc ctagcccgta tccgggcgtg catcggtcgc tcgccgtcct
      661 ggcgctgctc gccttcgcct gtggcccggt cgccggccgt cggggaaaca cggtgattct
      721 tgcgtcgggt gccgacctcc agagtcccaa cccgttgctc accgtgcatc ccctggcccg
      781 ccaggttcag cgctacgccc tgctggtcac tctgatccgt tacgacagcc tgctggtgcc
      841 cgagccctat ctggcccgca gctgggaatg gtcggccgac agcaccaggc tgaccctccg
      901 gttgtacccc gaacttcggt ggcatgacgg ggtgcgtacc acggcctacg acgtggcctg
      961 gacgctggag gcggcgcggg atcccgcgac cggatacccg cggcaactgg atctggccgg
     1021 gctgacggcg atcgagccgg acgacgacac gaccttggtg ctgcagttcg ccggccggca
     1081 atccggcatt cccgacgtcc tgaccgatct ggcgattctt cccgagcacc tgctcgatac
     1141 cgtcccgcgg aacgagctgc gccgagccca atggaaccgg cggccggtcg ggaacggtcc
     1201 gttccggttc gtggcccacc agcccaaccg acgctgggtg ttcgaagcca atcccgagtt
     1261 cccggccgag ctgggtggcc cgcctcgcct ggcgcgtttc gtcatcgcgg tggtcgacga
     1321 gccgaccacc aagctcgcgg ccttgacctc gggcgagctg gacctggcgg ggatccatcc
     1381 ggggcacgcc gatttcgtgc ggcgagaccc gaacctgcgc gtgctggact acccgctgct
     1441 tttcacctac gcactcgtcc tgaacctcag gcgcccgccc ttcgatcgcc ctctggttag
     1501 gcgggcactc tcgctggtga tcgatcggcg cgccatcgtt gacggcgcgc tcttcggctt
     1561 cggtaccccc gccgatggcc cgctgccgcc gcccctggcg ccagattccc tcaagccggc
     1621 tctgttcgct cccggccgcg cgattcccct gctgggagag cagtccctgc gcttcgagct
     1681 gctcacggtc ggaagcggcg aagccgcgct ggagcagatg ctgcaggctc agatggcgct
     1741 ggtcggcatc cgggccgaga tccggcaact ggagctctcg acctacctcg accggatcca
     1801 gggagcctcc cacaacttcg aggcagcggt gatgggcgtg tccggcgatc tcggtctggg
     1861 gcacctggct ccgctgctcg aactgaccgg tttgggcgcg ggagcggacc gcgcgacccg
     1921 gattcggctc ttcaccgact cgttgccggc cttgttcctg tatcatgccc gtggagtgca
     1981 gggcatcaac cgccgggtac agggagtcca catggatctg cgaggcgagc tggtgacgct
     2041 gtcgcactgg tgggtgaatg accgatagca gcgcgccggt atttcatgca tccgctccgg
     2101 tccggctcga tttcgccggc ggttggaccg atgtggcacc cttctgtcga gaggaacgag
     2161 gcgcggtggt caacgcagcc gtcgagctgc gagcccacgc ggtggtgcgg ccgggcggcg
     2221 atacctaccg gttggtctcc gaggacctgg atcaggcgct cgagaccagt ggcccggacg
     2281 cgctggcgcg aaatggaaaa ctcgatctgc tcaaagcggc cctgcgtcgt tccggcatcg
     2341 gtccggccga cgtgcgcacc cgctccgagg ttccccccgg ctccgggttg ggcagctcgg
     2401 gtgccctcga cgtggcgctg gtcgccgcgc tggacgcggc ccagggaaga ctccggtccg
     2461 gggtcgagct ggccgaggaa gcctggcagc tcgagaccat cgatgccgct cttcccggcg
     2521 ggaagcagga tcagtacgcc gcagccctgg gaggatttca tcagcttgcc ttcgagggtg
     2581 gggcggtcca ggtgaggccg ctgcatctcg cgccggagtt catggccgag ctggaacggc
     2641 gcactctggt ctgctacacc ggcacctcac gggtctcctc gaacacgatt tcccgggtca
     2701 tgagtcgtta ccgtcagggc gacgggggcg tggccgacgc gcttcgcacc ctggccgagc
     2761 tggcccggca gatgggggag gcgctgcagc ggcacgacct gaaccgggtg gccgcgctcc
     2821 tggacgagaa ctggcggcag cagcagcggc tggatcccag catgcgcacc gagacgatgg
     2881 cgcggctcga gagcgccatg agccgggccg gtgcgctggg tggcaaagcg gccggcgccg
     2941 gtgccggcgg atcgatgttt ttcatcctcg aaggggatcg cggggtcgcc gaacagtccg
     3001 cgcgggatgc cggggcgacc gtgctgccct tcacctgggc tcgagaaggc gtgagggtct
     3061 ggtgaaggtc gccggcttca cgtccaccgg aagcaagcgc ccggaggccc tcttcggcga
     3121 gagcgagccg ggcctgccgc tccggatggt ccagagctcc ggttgccggg tgcaggatgc
     3181 gaacggcaag gagtatctcg attacatcat ggcgctgggc tcggtggcgc tgggttacgg
     3241 ccaccccgag gtgaaccggg ccgtgatcga cgcggtccaa cggggggcga tcggaccggt
     3301 gtcgcccatc gacgaagccg agctcgcggc cgagctcggc gcaatgatcc cgatgatcga
     3361 ggagatccgg ttcctgaaga ccggcgccga ggccgtcgcc gccgccgtgc gattggcccg
     3421 ggtcgcgacc ggacgggacc aggtcctggg ttgcgggtac catggctggc tcgactggtg
     3481 cagcgacaac gccggggtac cggccccggt ccgtgctctc tatggcgtcc tccccttcaa
     3541 cgatgtcgag ggcaccgtcg agctcatccg gcgggcggga gataccctgg cctgtgtcgt
     3601 gatggagccg gtcgtcgaag caccgcccag tggggactgg ctccgagccg tgcgggagga
     3661 aacccgccgg gtcggcgccg tgttggtctt cgacgagatc aagaccgcct ttcgagtcgg
     3721 gctgagcggc gccgcggccc gctggggcgg agagcccgac ttggtggtcc tgggaaaggc
     3781 gctcgcgaat gggtttcccc tggcggctgt cggtggctcc agccggatca tgcagctggt
     3841 gagccggacc tggatctcgt ccaccatggc gaccgagttc gtctcgttcg cggccgcgcg
     3901 cgccacccta cgggtggtcc gggatcagaa tctgcccgag cggctcgacc gcctcggcag
     3961 catcctgttg gcagggctga aacggctggc ggagcgattc ccgcgtcaca ttgccggcgt
     4021 gggcggcatt cccgaaatgt gttacctgcg ctatcgcgac gaagagttca gccagcgggt
     4081 ggcgcaggac tgcgcccggc ggggcctgct gttcaagcgg acggcgtaca acttcgtatc
     4141 attggcgcac gacgagtcgg ccctgaagtt cgccctggac acgctggaag aagttctgac
     4201 gacggacgac tgacccggga agcgccaccg tgctcatcga tgtccacgcc cacttctacc
     4261 acgccggctg cacccgctcg gactgggccg agctcaacgc cagccggctc cgggcggggg
     4321 agcggatcgg gatcacctgg catgtcgcct ccatcctggg gagctggggc aggacctcgc
     4381 ccacgtattt cccctctccg gccgatgtga tctcggggaa cgacgcgctg ctgcagctca
     4441 tgcggaatca tgcttcccgg atccgcggtt acgtctgtgt caacccgaat tacaccgagc
     4501 aggcgctggc cgagattcac cggtgtctgg acgcggggat gatcggcgtg aagctcgccg
     4561 ccagtcgtcg ggcgaatgac ccattgctgg atccagtatg cgagaccgcc cggcggagaa
     4621 gtgcgcccat cctgcatcac atctggcagc atcggcgcca cgaatggcga gggcaggagg
     4681 cgtcggatgc ggtcgagctg ggtgagctgg ctgagcgtca tcccgaggtg ccgttcatcc
     4741 tggcccacat cgccggtggg ggagactgga tccactcgct ccaagccgtg cgcgagcggc
     4801 cgaacatctt cgtcgatttg tccggcagcg gagtcgacgg tggcatgctg gaggcgtgcc
     4861 tgcggtcggt cggtgtcggc cgtcttctct ggggtgcgga catcactctc gataccggtt
     4921 gggccaaact gcgctatctc gagcagctgc tgccctccga tcaggtggag cggatcgcct
     4981 ggcgcaatgc cgcggcgatc ttcccgcccg gcagtttcgt cagggactga tcatgcggat
     5041 cgatgtgaac gcgttcctgg gaccataccc cttccggagc cacccggaca cgaccccgag
     5101 tggcctgctc caggcgatgg atcgcgtcgc catccaggaa gcctgggtgt cccacctgtc
     5161 ggccattttc tggcgggacc cgatggaggg caacgccagc ctctaccaga cggcggatca
     5221 gcatccccgc ctccgtcctg ttcccgccct gcaccccgag ctgcccggct ggccccgagc
     5281 cctggctgag gcggccgagc gccacgcgcc ctgcgtgcgc gccgacccga cgttctacag
     5341 ccttccgccg gcgggacacg cgatgcgcgc cttagccgcg gcatgcggag accggggatt
     5401 gcccttgttg ctcgcggtcc ggctggaaga tggacggcag cgccatcccc acgaccgcgc
     5461 cgaagtcctg ccgccgtcgg cggtgcgttc gctgattaga tccgacccca aggtcaggct
     5521 catcgtcacc cacgccgatc gggagttcgt ggaagaggtg catttcggcg ccaccccggc
     5581 cgaggccgag cggatcctgt gggatatctg ctggatctgg ggaccaccgg aggaccacct
     5641 ggcacagctg cttcacactg tcggagtgga gcgatttgcc ttcgggagcg gaatgccaat
     5701 gcgattaccc gaagcgagcg tctgcaagct ggatctcctg gatctgaccc cggcagagcg
     5761 cgagctgctg gattccggca acctgagacg cttcggctcc tcagcgctct agaacctaag
     5821 aagcatccac cgatgacacg gatgacgcgg atgacacgga ttgtcacagc agcagcaaca
     5881 acaacaacac ataggattga gggctgtcat ccgcgtaatc cgcgtaatct ggattgcagt
     5941 tttcacgtcg gatttgtcag cgtaggccaa ccgtccagac gctcctcgac gaactgatcg
     6001 tcggccaggt gcggataggc cctgcacacc cggtcgatct cgcccatctg cccggacctg
     6061 tcgagcagcg cggaccactg ttgtggaatg cgagaggatc acccgctccc ctccgggtgc
     6121 gtgttatcga aaaccggcag caaccaacgg ccgcatttgg tcaagggtca gcgatgcaga
     6181 cgaaggatcg tgttcgaagc ctgtgaaatg ccacgtgtgc acctaccacc cgccctcgtt
     6241 ccgccatacc atcttccggc agccatcacg ttcccgaccc atgcctcgga gtgacccatg
     6301 cacctcctcc tct
//
LOCUS       DASWKS010000407         1868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2075800, whole genome shotgun sequence.
ACCESSION   DASWKS010000407 DASWKS010000000
VERSION     DASWKS010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2075800"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VGA78_11625"
     CDS             <1..307
                     /locus_tag="VGA78_11625"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEX9894567.1"
                     /translation="MPVWRARYPGVEELRVAVMGCVVNGPGESKHAHIGISLPGTFEE
                     PVAPVYVDGRLHSTLRGEGIVKEFLAILEMYVDEHYPAQPAGPPVRPSARPSVITGS"
     gene            309..998
                     /locus_tag="VGA78_11630"
     CDS             309..998
                     /locus_tag="VGA78_11630"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEX9894568.1"
                     /translation="MEPGLLDQPLTALPVLFGAGLVTSLTPCVYPMIPITAGILGGAG
                     AAGRSRRATVVFTLLYAVGLALVYALLGLIAGLTGSLFGTISSNPWAYFAFGNLLLLA
                     GLAMLGVIPIAAPERMLQWAGRVGGQSPGGVFLMGATSGLVAAPCGAPAFAAVLTWVG
                     STQSGVWGFVYLFVFSLGMTALLIAIGLFSGTLATLPRAGRWTGWVKNTAGVLMLAMA
                     EYYFIKMGQVF"
     gene            1121..1591
                     /locus_tag="VGA78_11635"
     CDS             1121..1591
                     /locus_tag="VGA78_11635"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX9894569.1"
                     /translation="MGPAVWPSGRLAVQGGLAVGSPAPAVTINDLDGKPVAFSDFIGK
                     KPALIQFWATWCELCERLDPKVRAAAERYGAEVEFIGVNVTVNQKVERVRRWVAEHKP
                     AFRVLWDNRGVAVRAYDVPSTSFIAIIDAKGKVAYTGVGADQDLDAALRKVVGR"
BASE COUNT          257 a          599 c          657 g          355 t
ORIGIN      
        1 aatgccggtg tggcgcgcgc gctaccctgg cgtcgaggaa ctgcgcgtgg cggtgatggg
       61 ctgcgtggtc aacgggccgg gcgagtccaa gcacgcccac attggtatct cgctaccggg
      121 caccttcgag gaaccggtgg ccccggtcta tgtggatggc cggctccatt cgaccctgcg
      181 cggcgaaggc atcgtgaagg agttcctcgc gatccttgag atgtatgtgg acgagcatta
      241 cccggcccag cccgccggcc cgcccgtccg tccgtccgcc cgtccgtccg tcatcacggg
      301 aagttgaagt ggaacccggc ctcctggacc agcccctgac cgccctgccg gttctgttcg
      361 gtgccggtct ggtgaccagt cttacaccct gcgtctatcc gatgattccc atcacggcgg
      421 gaatcctggg gggcgcggga gcggcgggac gctcgcgccg cgccaccgtg gtattcacgc
      481 tcttatacgc cgtgggtctc gccctggtgt acgcgctgct gggtctgatc gcgggactca
      541 ccggatcgct cttcggaacc atcagctcca atccctgggc ctacttcgcg ttcgggaacc
      601 tgctgctgct ggccgggctg gccatgctgg gcgtgatccc gatcgcggca cccgagcgaa
      661 tgttgcagtg ggcggggcgg gtcggcggac agtcgcccgg gggcgtgttc ctcatggggg
      721 ccacctccgg cctggtggcc gctccctgcg gggcaccggc cttcgccgcg gtgctcacct
      781 gggtgggcag cacccagagc ggggtgtggg gcttcgtcta tttgttcgtc ttttccctcg
      841 gcatgaccgc cttgctgatc gcgatcggcc tcttttccgg aaccctcgcc accctacctc
      901 gcgccggccg atggaccggg tgggtgaaga acaccgcggg tgtgctcatg ctggcgatgg
      961 ccgagtacta ctttatcaag atggggcagg tcttctagcg gacggccgga cggccggacg
     1021 gtcggacgga cgggttgcac tccgggggcg ccgtatgttt tggatcgcag tacttgtctc
     1081 acaggcctta gcctcgaacc tgacgtccgt cggtcagccg gtgggtccgg ccgtctggcc
     1141 gtccggccgt ctggccgtcc agggaggcct cgccgtcggc tcgcccgcgc ccgcggtcac
     1201 gatcaacgat ctcgacggca agccggtggc gttcagcgat ttcattggca agaagccagc
     1261 gctgatccag ttctgggcga cctggtgcga gctgtgcgag cggctcgacc ccaaggtacg
     1321 ggccgcagcc gagcgctacg gtgccgaggt cgaattcatc ggcgtcaacg tgacggtgaa
     1381 ccagaaggtc gagcgggtgc ggcgctgggt ggcagagcac aagccggcct ttcgggtgtt
     1441 gtgggacaat cggggggttg cggtgcgggc ctacgacgta cccagcacct cgttcattgc
     1501 aatcatcgac gccaagggca aggtggccta taccggtgtc ggggccgatc aggaccttga
     1561 cgccgcattg cgaaaggtgg tgggacgatg agggcggaca ggcgggcggt cggtcgggcg
     1621 gtccggtggt tagtgagcct ggtggtcttg tccgccagcc cgcccgcccg cctgcccgcc
     1681 caggaaccag ttaaggcccg cctcctgggc gatccatcac cggggagcga agctccggca
     1741 atttctttgc cctacttcac tcgcgaaggt ccggggccgg ttgatcaacc atttacgctc
     1801 cgggcggagc tcggccgggt ggtggttctg gcgttttgcc gaggactcac cgacagcgcg
     1861 gctgtcgt
//
LOCUS       DASWKS010000408         6765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2805497, whole genome shotgun sequence.
ACCESSION   DASWKS010000408 DASWKS010000000
VERSION     DASWKS010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6765
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2805497"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1428
                     /locus_tag="VGA78_11640"
     CDS             <1..1428
                     /locus_tag="VGA78_11640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894570.1"
                     /translation="RGAAQGYRLRLDTRAQAVSYRGLTPDSVPVSEVVVGPTGGFVTT
                     SGIAVRCTGGTFCFYFRPGPELQGVPVSATASLVLWGLGLPGLTLHATGRLVADLGEA
                     DAWPGADPTGQLLEGYLEYGRDWLTARGGRLLAISRLEPIGFDGAWLRVRWNDYDLEA
                     TGFGGWGLGQAAVVPITSPVLNPLDEWRPRERQLVAGAELAWLPGPIDVRAEYRREVE
                     QETGDYVSERTALSLGVHPWRFLRATGGLDYNLAEGHIGNADLGVTYLHPRLTVTAGG
                     RRHRPYFSLWTLWGAFSPAPYNAVHGSAQVQLTDWLAVHGRGERYWYEDAEVSTPLVD
                     VEDRGWRLSLGATAALHPKWSVDGAYLADFGPGASSRYVDAMVTFQPTAGLALSAYGG
                     TLERPLELRFYDAETAWIGGRGDWRVDDHWRIWADAAWFAEDRNRPDAAATAFDQLRL
                     RGGATLVFGSSADRSPLPPARRRRP"
     gene            1425..2894
                     /locus_tag="VGA78_11645"
     CDS             1425..2894
                     /locus_tag="VGA78_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894571.1"
                     /translation="MSRRAVRLLLISAATVTAMVALASPGHRGEDQDRFPHQRHANLF
                     PLCTTCHAGMVDTSAAIWPQPASCVACHDGAIKERVDWQPRSGPRASNLRFGHVVHGR
                     SAAARDAAHSELRRQCVECHAVAGAERMAVQHAVVGRCLECHQLGSEHLGVADTACAR
                     CHFPLAEAPSLSRQQVAGFPEPPSHQRPGFALTGHADLAKVPIEAGRFTVAASCATCH
                     ARDFCITCHVNAPEVPAIQALAPDERSLAIETELPAPSTHQRADWVGVHGREASRSRA
                     SCAACHAQESCVTCHVGSISKAVARLARRGPGRGPGVRLERAAPESHTWEFSDRHGPD
                     AGARPSSCEGCHVRQDCLDCHRPSPGRGSGYHPDGFLARHPSSAYAREANCSDCHNPA
                     QFCQSCHQEAGLTALRRLGPGGFHDAKRAFLVGHGQAARQQLESCASCHAERDCTSCH
                     SAVGGGFRFNPHGPGFDAERMRRKNPSLCRACHGTAVPR"
     gene            complement(2934..3263)
                     /locus_tag="VGA78_11650"
     CDS             complement(2934..3263)
                     /locus_tag="VGA78_11650"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9894572.1"
                     /translation="MKTLWLTLGLLLAASSATAQAPDGKALYEKNCRMCHGADGTPPA
                     AMLKMMPTLPTLNASFMASRSDDSVVKVLTSGTAKMKSFKEKLTPEEMAAVAKYLREL
                     GKKAGDS"
     gene            complement(3370..3714)
                     /locus_tag="VGA78_11655"
     CDS             complement(3370..3714)
                     /locus_tag="VGA78_11655"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HEX9894573.1"
                     /translation="MSPGEWLRRGLAPLVGRRWGADCPAGSPVPEPERCAALDCDSVR
                     LTMLAEGERGRVTCLEAPESTGARKLAALGILPGVGVVLLQRTPVFVFRMGHGEFALD
                     AGLAAQVRVRRE"
     gene            complement(3904..5931)
                     /gene="feoB"
                     /locus_tag="VGA78_11660"
     CDS             complement(3904..5931)
                     /gene="feoB"
                     /locus_tag="VGA78_11660"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEX9894574.1"
                     /translation="MGNRSSVLSVERSGSDRAGACHGPAADLPSDVVGRIRVALVGPP
                     NVGKSALFNRLTGRYVTVSNYPGTSVELSRGTGHLHGNAVEFLDTPGMYSLLSTTEEE
                     RVARRLVMNGGADVIVHVVDAKDLARMLPLTLQLLELGRPLVLALNMMDEAERAGLQV
                     DAAGLAARLGVEVMPVVAVDGRGVEPLRRAIARAPFTSAPARPLYGNGVGSAIAALRD
                     RLAGEYPVDPLAYAALVLQGDLDAEAVIGRVERDEGRTALALAQELAAGFGAPAAYRI
                     AVERQRAAEDLAAGLVRTNRDPGRAWGDRLGRWLARPITGIPALLLVLYVGLYLFVGR
                     FGAGTVVDWLEGTLFNQRINPFLERLFAGIPWETWRALFVGEYGLLTLGLRYAVAIIL
                     PIVGTFFLFFSVLEDSGYFPRLALLVDRVFKRLGLSGRAVIPMVLGFACDTMATMVTR
                     TLETRRERVLATLLLALAIPCSAQLGVILAVLAGHPLAFGVWVLAVLGSFLLVGALAR
                     RVLPGPDASFHMEIPPLRWPRPGNVLIKTYTRMQWYFLEVLPLFLLASVLLWAGERTG
                     IFGLVVGALEPVVGALGLPPDTGQIFLFGFFRRDYGAAGLFDLNRQGLLDPAQLAVAA
                     VTLTLFVPCIAQFLMMVKERGVGTALGMLAFITPFAFGVGMVVNLLLGWLR"
     gene            complement(6032..6154)
                     /locus_tag="VGA78_11665"
     CDS             complement(6032..6154)
                     /locus_tag="VGA78_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894575.1"
                     /translation="MRNHAPAMYDQVRVEKIEWPRFEADETRNLAEYLRTLSRR"
     gene            complement(6376..>6765)
                     /locus_tag="VGA78_11670"
     CDS             complement(6376..>6765)
                     /locus_tag="VGA78_11670"
                     /inference="COORDINATES: protein motif:HMM:NF023282.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MtrB/PioB family outer membrane beta-barrel
                     protein"
                     /protein_id="HEX9894576.1"
                     /translation="VNTYGGGLSRVMLPGKLDLDLRYHRSDGEDLTRTSTPGTPDLVT
                     TARDYPLVVSDWQSLLATVRYTVSSRVLVSFEYRFEEYEQADFALDVMAPFMGNLDPA
                     SAGTTWLGVTRPDFQAHLASLIFSLRL"
BASE COUNT         1116 a         2373 c         2253 g         1023 t
ORIGIN      
        1 cgaggagctg cccaaggcta tcggctccgg ctggatacgc gggcccaagc ggtttcctat
       61 cggggtctca cccctgacag cgttccggtc agcgaggtgg tcgtgggccc gaccggcggc
      121 ttcgtgacca cttccggcat cgcggtgcgc tgcaccggcg ggacattctg cttctacttc
      181 cggcccggcc ccgagctaca gggagtcccg gtctccgcga cggcctctct ggtgctctgg
      241 ggcctcgggc ttcccggtct gacgctgcat gcaaccgggc ggctggtggc cgacctcggc
      301 gaagccgacg cctggcccgg cgctgatccg acgggccagc tgctcgaggg atacctcgag
      361 tacggccgcg actggctcac ggctcgcggt ggccgcctgc tcgccatatc gcgcctcgag
      421 ccgatcggat tcgacggcgc ctggctgcgg gtccgctgga acgactacga cctggaagcg
      481 accgggttcg gcggctgggg gctcggccag gccgcagtag tcccgatcac cagtccggtg
      541 ctcaacccgc tcgacgagtg gcgaccacga gagcgtcagc tggtggccgg cgccgagctg
      601 gcgtggctgc ccggcccgat cgatgtacgc gcggaatacc ggcgtgaggt ggaacaggag
      661 accggtgact acgtctcgga gcggactgcc ctctccctgg gcgtacaccc ctggcgcttc
      721 ctgcgggcga ccggaggcct cgactacaac ctggcggaag gccatatcgg gaacgcggac
      781 ctcggggtca cctatctgca tcctcggctc acggtgacgg ccggcgggcg ccgtcatcga
      841 ccttatttca gcctctggac gctctgggga gccttcagcc ccgcgccgta caacgcggta
      901 cacggctccg cgcaagttca gctgaccgac tggctcgccg tgcacggacg cggcgagcgc
      961 tactggtacg aggacgccga ggtttcgact cctttggtgg acgtggagga ccgcgggtgg
     1021 cgtctcagcc tgggcgcaac ggccgctctg catccgaaat ggtcggtcga cggcgcctac
     1081 ctcgccgact ttgggccggg cgcctcctcg cggtacgtcg acgccatggt gacgttccag
     1141 cccaccgccg ggctcgcgct cagcgcctac ggtgggaccc tggagcggcc tctcgagctg
     1201 cgcttctatg atgcggagac cgcgtggatc ggtggccgcg gcgactggcg ggtggacgac
     1261 cactggagga tctgggcgga cgccgcctgg ttcgctgaag accggaaccg accggacgcg
     1321 gccgcgacgg ccttcgatca acttcggctt cggggcggag cgaccctggt cttcggatcc
     1381 agtgcggatc gatctccatt gccgcccgct cgccggaggc ggccgtgagc cgccgcgcag
     1441 tcaggctcct gctgatctcg gccgcaacgg tcaccgccat ggtcgcgttg gcctcgccag
     1501 gacaccgcgg cgaagaccag gatcgcttcc cgcaccagag gcacgccaac ctcttcccgc
     1561 tctgcacaac ctgccacgcc gggatggtgg acaccagcgc tgcgatctgg ccacaaccgg
     1621 cttcctgtgt cgcctgtcac gatggagcga tcaaggagag ggtggactgg cagccgcggt
     1681 ccgggccgcg ggccagcaac ctccggttcg gtcacgtcgt gcatggcaga tcggcggcgg
     1741 ccagggacgc cgcccattcg gaactgcggc ggcagtgcgt cgagtgtcac gccgtggccg
     1801 gcgcggaacg aatggcggtg caacacgcgg tcgtgggccg ctgcctcgag tgccatcagc
     1861 tcgggtccga gcaccttggc gtcgccgaca ctgcgtgtgc gcgctgtcat ttcccgctcg
     1921 ctgaagcccc gtcgctgagt cggcagcaag tggccggatt cccggagcca ccctcgcacc
     1981 aacggcctgg tttcgcgctc accgggcacg ccgatttggc gaaggtgccg atcgaagccg
     2041 gacgcttcac cgtcgccgcg agttgcgcga cctgtcacgc gcgcgacttc tgtatcacct
     2101 gccacgtgaa tgcccccgag gttcctgcca tccaggccct cgcgccggac gaacggtcgc
     2161 tcgccatcga gacggagctt cccgcgccgt cgacgcacca gcgggccgat tgggtggggg
     2221 tgcacggtcg ggaggcgagc cgctcccgtg cctcatgcgc ggcgtgccac gcccaggaga
     2281 gttgcgtgac ctgtcatgtc gggtccatct cgaaggcagt cgcccggctg gcgcggcggg
     2341 gtccaggacg cgggccaggg gtccggctcg agcgggccgc tcccgagagc catacgtggg
     2401 agttctcgga ccggcatggg cccgatgccg gcgcccgtcc gtcgagctgc gagggctgtc
     2461 acgttcgaca ggactgcctc gactgccacc gtccctcgcc cggtcgcgga tccggctacc
     2521 atccagacgg tttcctggct cggcatccca gctcagccta cgcccgggag gccaactgca
     2581 gcgactgcca caaccccgcc cagttctgcc agagctgcca ccaggaggcg ggactcacgg
     2641 cgctacgccg gctcggtccg ggtgggttcc acgacgcgaa gcgcgccttt ctggtcggcc
     2701 atggtcaagc cgcgcgacag caactcgagt cgtgcgcttc gtgccacgct gagcgggact
     2761 gcacgagttg tcattccgcc gtcggcggcg ggttccgctt caacccgcat gggcccggct
     2821 tcgacgccga gcggatgcga cgcaagaacc cgtcgctgtg cagggcgtgt cacggcaccg
     2881 ccgttccccg gtaggagacc gccgaggaac ccggcacgca acgagcggag cgactacgag
     2941 tctcccgcct tcttacccag ctcgcgcagg tacttcgcca ccgccgccat ctcctcgggc
     3001 gtcagtttct ccttgaacga cttcatcttc gcggtcccgg aagtcagcac cttgaccacg
     3061 gagtcgtcag agcgggacgc catgaagctg gcgttcaagg tggggagcgt cggcatcatc
     3121 ttcagcatgg ccgccggtgg ggtgccgtcc gccccatggc acatcctgca gttcttttcg
     3181 tacagggctt tgccgtcggg tgcctgggcc gtggcggagg aagccgcgag cagcaagccg
     3241 agggtcaacc aaagggtctt cattgcctct ccttgaaagg ttcccatcac ctcggtatgg
     3301 agcttcgcca tcccggcctg aagaggcaat gaaggcgctt tgaagacctg cttcccttcc
     3361 ggggtccggt cattctctcc ggacccggac ctgcgcggcc agcccggcat cgagggcgaa
     3421 ctccccgtgc cccatgcgaa agacgaacac cggtgtgcgc tgaagcaaca cgaccccgac
     3481 gcccggcaga atccccagcg ccgcgagctt cctcgccccc gtgctctcgg gggcctcgag
     3541 gcaggtcacc cgtccccgtt ctccctcggc cagcatcgtg agccgaaccg aatcgcagtc
     3601 gagggcggcg cagcgttccg gctccggcac cggggagccg gcggggcaat ccgcgcccca
     3661 tcgtcggcct accagcggtg ccaggcccct ccgcagccac tcaccgggac tcatcgggcg
     3721 ccacccatcg ggccagacgg ctgagccaag ccggaggaag aggattctcg tagccgcacc
     3781 tggggcaacg gacgaagtga caacccgccg caaggggaca acctcggcac gcgggctggc
     3841 cccgatcttc cgggaactcc tgcgcgcaaa gcccgcagac gatcgtgttc gagcgctcgg
     3901 cactcatcgc agccacccca acagcaggtt caccaccatt ccaacgccga aggcgaaggg
     3961 tgtgatgaag gcgagcatgc cgagcgcggt gccgacaccg cgctccttga ccatcatgag
     4021 gaactgggcg atgcagggca cgaacaacgt cagagtcacc gccgcgaccg ccagctgcgc
     4081 gggatccagc aatccctgcc gattcaagtc gaacagcccg gcggcgccat agtcccgccg
     4141 gaagaagccg aacaagaaga tctgcccggt gtcgggtggg agcccgaggg cgccgacgac
     4201 gggctctagc gcgcccacga cgaggccgaa gatccctgtg cgctcaccgg cccacagcag
     4261 gacgctggcc agcagaaaca gcggaaggac ctcgagaaag taccactgca tccgggtata
     4321 ggtcttgatc agcacgttgc ctggccgggg ccagcggagt ggcgggatct ccatgtgaaa
     4381 gctggcgtcc gggccgggga gcacccggcg ggcgagtgcg cccaccagga gaaaactgcc
     4441 cagcaccgcc aggacccaca cgccgaaggc gagcgggtgg ccggcgagca ctgccaggat
     4501 cacgccgagc tgggccgagc aggggatagc gagcgcgagc aacagggttg cgagcacccg
     4561 ctcgcggcgc gtctccaggg tgcgggtcac cattgtcgcc atggtgtcgc aggcgaaccc
     4621 cagcaccatc ggaatcacgg cccggccgga gaggcccaat cgcttgaaga cccgatcgac
     4681 cagcagcgcc aggcgcggga agtatcccga gtcctccagc accgagaaga agaggaagaa
     4741 ggtccccacg atcggcagga tgatcgccac cgcatagcgc agcccaaggg tgagcagtcc
     4801 gtactccccc acgaacagcg cgcgccacgt ctcccacgga atccccgcga acagccgttc
     4861 caagaatggg ttgatccgct ggttgaacag cgtcccctcg agccagtcga ccaccgttcc
     4921 cgccccgaac cggcccacga agaggtacag accgacgtag agcaccagga ggagcgcggg
     4981 aatcccggtg atcggccgag ccagccagcg gccgagacga tccccccacg ctcgaccggg
     5041 gtcccggttg gtgcgaacca accccgccgc caggtcttcc gccgcccgct ggcgctccac
     5101 cgcgatccga taggcggccg gtgcgccgaa cccggcggcc agttcctggg ccagagccag
     5161 agctgtcctg ccctcgtctc gttccactcg tccgatcacg gcctcggcgt cgaggtcacc
     5221 ctggaggacc agcgcggcgt acgccaacgg atcgaccgga tactccccgg ctagacgatc
     5281 ccgcagagca gcgatggccg acccgacacc gttgccgtag agcggccgtg ctggggccga
     5341 agtgaagggc gcccgagcga tcgcccttcg tagcggctcg accccccgtc cgtctaccgc
     5401 cacgaccggc atcacctcga cgccgaggcg cgcggccaat ccggcggcgt ccacctgcag
     5461 gcccgctcgc tcggcttcat ccatcatgtt cagcgcgagc accaggggcc gacccagctc
     5521 caggagctgc agggtgagcg ggagcattcg tgcgaggtct ttggcatcga ccacgtggac
     5581 gatgacgtcg gcaccgccat tcatcaccag gcggcgcgcg acccgctctt cctcggtggt
     5641 ggagagcagc gagtacatcc ccggcgtatc caggaactcg acggcgttcc catggaggtg
     5701 gccggtcccg cggctcagct cgacggaggt gccggggtaa ttggagacgg tgacgtagcg
     5761 accggtcagg cgattgaaga gcgcgctctt ccccacgttc ggcgggccca ccagcgcgac
     5821 ccgaatccgc ccgaccacgt cgctgggaag gtccgctgcc ggtccgtgac aggctccggc
     5881 cctgtccgac ccgctccgct cgacgctcag gacgctcgat ctgttgccca ttggtatcta
     5941 ctaaagagcc ttcatttgca aggagccttg aaacgcagat gaaggtcttc ggagggtgcc
     6001 cctgcggggg cggagaggca gggggcgccg gttagcggcg actcagcgtt ctcagatact
     6061 ccgcgagatt acgcgtctcg tccgcctcga atcgcggcca ttcgatcttt tccacccgga
     6121 cctggtcgta catggccggg gcgtggttcc gcatggccgt agccagtccc aggcgggtgc
     6181 gcgtcgcttg ggaggccgac gggtccggtc cgatcgaggg ttgaccgtcg cgcgcgtgac
     6241 accgggcgta tccctttgat tccacaacac gcccgcaatc tccgacccgg agccggaggt
     6301 gcgcgatatg gaggtccgga ccgtaggcgg tgacgccgtc tcacctcgac cctcctggtc
     6361 tcagagccgg ccgcgctaga gccgaagact gaagatcagg gacgccaaat gggcctgaaa
     6421 gtcgggccgc gtcaccccca gccacgtcgt cccggccgac gctggatcca agttccccat
     6481 gaacggggcc atgacatcca gcgcgaagtc cgcctgctcg tattcctcga atcggtattc
     6541 aaagctcacc agcaccctcg acgaaacggt gtaccgcacg gtggccagaa gggattgcca
     6601 gtcgctgact accagcggat agtcccttgc cgtggtgacg aggtccgggg tgcccggcgt
     6661 cgaagtgcgg gtgaggtcct ccccatccga gcggtgataa cgcagatcca ggtccagttt
     6721 tccggggagc atgacccggg agaggccgcc tccatacgtg ttcac
//
LOCUS       DASWKS010000409         6897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2805533, whole genome shotgun sequence.
ACCESSION   DASWKS010000409 DASWKS010000000
VERSION     DASWKS010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6897
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2805533"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..1314)
                     /locus_tag="VGA78_11675"
     CDS             complement(22..1314)
                     /locus_tag="VGA78_11675"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEX9894577.1"
                     /translation="MKRHMRFLLPWGTLLLLVACRDDQTTDLGTGPTGPELLVQAAVS
                     PVAQLGQMLFEDQNLSVNRNQSCRTCHEPAQGFAAALRGVPVRGSVVQGSVAGRFGDR
                     KPPTSAYATMTPLFSGGSNPVGGIFWDGRATGALLGNPAADQALGPFVNPAEQALPDM
                     ACLAHRVRESAYLGAYTAVWGNAITSIVFPANTATICSTPAMAAGEPVALSPADRVKA
                     RTEYYNIAGSIQQFEATLNRFSARVDLGTLTTLEAAGRKLFSGKGKCHQCHDNKGSQP
                     VFTDFRFHNIGVPRNPANPVYNYQNLAVFDKGLGGFTGRATQVGQFRTPTVRNVGLGD
                     NRTYMHNGVFVSLRQVVDFYNTRDVTRVCTAAELQTLLPAQYGHYDPDGAGPLTPAGC
                     WPPPEFGKNMDTKQMGNLGLTLREVDLIVAYMMAMTDF"
     gene            complement(1500..1928)
                     /locus_tag="VGA78_11680"
     CDS             complement(1500..1928)
                     /locus_tag="VGA78_11680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TA system VapC family ribonuclease toxin"
                     /protein_id="HEX9894578.1"
                     /translation="MADLLDASVWLPLSAAGHVHHGRARDYWANQSGDQIAFCRVTVL
                     ALLRHLTNRRIMGPDVQTAEQAWGIYERWREVPDVLHLSEPDGVDAQLAEWSETLKLE
                     SGHWTDAYLAAVAVSGGHRLVTFDADFKRYPNLEFLHLEK"
     gene            complement(1912..2178)
                     /locus_tag="VGA78_11685"
     CDS             complement(1912..2178)
                     /locus_tag="VGA78_11685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894579.1"
                     /translation="MRTSFDLPNDLYRTLKARAASSGLKVRELVIRYLEQGLQQPVRR
                     PGQAPRPVPPVMVPSSGHVLRSLTRKQAARLDEEEDLAKHGRSA"
     gene            complement(2266..2394)
                     /locus_tag="VGA78_11690"
     CDS             complement(2266..2394)
                     /locus_tag="VGA78_11690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894580.1"
                     /translation="MPRIMGQVDGGHAALPQLAVELLSVGEHGAEPGEHLGHRPHR"
     gene            2624..2815
                     /locus_tag="VGA78_11695"
     CDS             2624..2815
                     /locus_tag="VGA78_11695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894581.1"
                     /translation="MSLGTPHYMSPEQATAEKSLSNRSDIYSLGAVPLRNADRQPAPH
                     RGLAQQIIMKIPEIESIMP"
     gene            complement(3012..5690)
                     /locus_tag="VGA78_11700"
     CDS             complement(3012..5690)
                     /locus_tag="VGA78_11700"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894582.1"
                     /translation="MTDTGRVATALADQYHIERQLGAGGMATVYLARDLKHDREVALK
                     VLRPDLSAILGADRFLNEIRITARLDHPHILTLIDSGASEGFLWYVLPYVRGESLRAR
                     LGREKQLGIEEALRIARQIAGALDYAHRQGVIHRDIKPENILLFEGEAMLTDFGIALA
                     VKEAGGSRLTETGLSLGTPQYMSPEQATGERQPDARSDVYSLGAVLYEMLAGEAPHSG
                     ATAQAVIAKLLTEKPTRLRTVRDTIPEALDQAMAKALAKVPADRFPSAGEFAHAVTAS
                     ISSASRSEGDVGRRTRRSFATLAVGAVLVGAGVVGAVALARRSSSRLQPVVLGKATQV
                     TADAGLEIHPAISPDGKFVAYAAGGSQRMRIFIRPIGGGRTIPLMDDPGSMQTNPRWS
                     PDGASILFLARGGALVAPALGGSARPLVPGRPDAPVTVADWSPDGGQILFVRGDSLQV
                     RTVEDGATRLLLANQWAEQGLVTLTDPGDWLHSCAWSPTGRVIACVSGNSDFVRVGRR
                     FGNLAPSQVLLVRLEGGAPIPVTDGSTLGQSPAWSSAGRSLYFVSNHQGPRDVYVLPV
                     TAAGRPGGQPIRLTTGLGAQSIGLTADGTRLIYSAYTARANVWTLPIPANGPVSTGGA
                     VPVTSGTQIIESIRVSRDGRWLLYDSDLHGNADIYRIPLAGGEPEQLTSDPSDEFAPD
                     LSPDGRAFAFHSFRTGTRDIVVRSLDGGAAQQVTSTPSHESFPVWSPDGTALVIFDQP
                     PFNGAYIVRRRPDGAWGTPTLLAKEMDFPSWSPDGRLVLGTTTSTKGAAVIPADGGSP
                     RLVYQPRSGSSDPPVERAEWSRDGRTIYFKSLDPEGRASFWALPPSGGRPRLLVRFDD
                     PTRPSSRPDFATDGRRFYFTIEDRQSDIWVAEITKR"
     gene            complement(6170..6586)
                     /locus_tag="VGA78_11705"
     CDS             complement(6170..6586)
                     /locus_tag="VGA78_11705"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEX9894583.1"
                     /translation="MPGELFVDTSAWYPAVVRSHPDHRPIAAELTGAVKRGTRIVTTN
                     LVIAETHALLLRRVGRDVALAFARTVRHQPNLVISSDPALETQAIEDWLERYVDQDFS
                     FTDAVSFTVMGSRDIGEALTLDHHFTVAGFHVIPAP"
     gene            complement(6576..6875)
                     /locus_tag="VGA78_11710"
     CDS             complement(6576..6875)
                     /locus_tag="VGA78_11710"
                     /inference="COORDINATES: protein motif:HMM:NF013561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HEX9894584.1"
                     /translation="MARRKRGRRESAPVQVYLDSEARARLARLAAQLEATRSDILRQG
                     LEALERAVLDPGNHPALQVIGLANRERAGRRTDAAREHDRVLTDEEEKGWSRSAG"
BASE COUNT         1187 a         2259 c         2319 g         1132 t
ORIGIN      
        1 ggcgcgcttc cctctcaact ctcagaagtc agtcatcgcc atcatatagg cgacgatcag
       61 atccacctca cggagcgtga gccccaggtt ccccatctgc ttggtgtcca tgttcttccc
      121 gaactccggt gggggccagc agccggccgg ggtgagcggg cccgccccat cgggatcgta
      181 gtggccgtac tgggccggca gcagtgtctg aagctccgcc gcggtacaga cccgggtcac
      241 atcacgggtg ttgtagaagt ccacgacctg tctcaggctg acaaacacgc cattgtgcat
      301 gtaggtgcgg ttgtcgccca gtccgacgtt cctgaccgtg ggcgtacgga actgacccac
      361 ctgcgtggct cgcccggtga agccccccag acccttgtcg aacaccgcca ggttctggta
      421 gttgtagacc ggattggccg gattccgggg cacgccgatg ttgtggaacc ggaaatcggt
      481 aaagaccggc tggctcccct tgttgtcgtg gcattggtgg cacttgccct tcccgctgaa
      541 gagcttccgg cccgccgcct cgagcgtggt cagcgtgccc aggtcgaccc gggcgctgaa
      601 ccggttcaga gtcgcctcga actgctggat cgaacccgcg atgttgtaat actcggtgcg
      661 cgctttgact cgatccgccg gggacagtgc taccggctct cccgcagcca tcgcaggcgt
      721 ggagcagatc gtggcggtat tggccgggaa cacgatcgag gtaatggcgt ttccccacac
      781 agccgtgtag gcgccaaggt aggccgactc cctcacccga tgggccaggc acgccatgtc
      841 cggcaatgcc tgctcggccg gattgacgaa cggacccagg gcctgatcgg ccgcgggatt
      901 gccaaggagg gctccggtcg cgcggccgtc ccagaagatg ccgcccaccg ggttgcttcc
      961 gccgctgaac agcggggtca tggtcgcgta cgccgaggtc ggtggcttgc gatccccaaa
     1021 gcggccggcg accgatccct gcaccaccga gccccgcacc ggcaccccgc ggagcgccgc
     1081 cgcaaagccc tgggccggtt cgtgacaggt gcggcatgac tgattgcgat tgaccgacag
     1141 attctgatcc tcgaacagca tctgccccag ttgagcgaca gggctcacgg cggcttgtac
     1201 cagcaactcg ggcccggtgg gaccggttcc cagatccgta gtttggtcgt cccgacaggc
     1261 aacgaggagc agaagcgtgc cccacgggag cagaaaccgc atatggcgtt tcatgaccca
     1321 cctcgacatc acgggggtgt tctcgcaccc cagaggccgt ggtccacgcc atctgcgtgc
     1381 cctcctctgg ggccccagca tgcacattgt aggagatggg cggtgaaatg gctgtgaatc
     1441 gactaggaaa gaaggtgcag ccgtggagaa ggcagaccga cgactgagac aaccgagggt
     1501 cacttctcca ggtgcaggaa ctcgaggttg ggataccgct tgaagtcggc atcgaacgtc
     1561 accagccgat gccctcctga caccgcgacg gccgccagat aggcatcggt ccagtgcccc
     1621 gattccagct ttagcgtctc gctccactcg gcgagctggg catcgacccc gtcgggctcg
     1681 gagagatgga gcacgtcggg tacttcgcgc cagcgttcat agatgcccca ggcctgttcc
     1741 gcggtctgga catcgggtcc catgatccgg cgattcgtca ggtgtcgcag cagcgccagc
     1801 accgtcaccc ggcagaacgc gatctggtcg cccgattggt tcgcccaata atcccgggct
     1861 cgcccatgat ggacatgtcc cgccgctgac aacggaagcc agacgctggc gtcaagcaga
     1921 tcggccatgc ttcgccaggt cctcctcctc gtccaatcgc gctgcctgct ttcgggtgag
     1981 agaacggagg acgtgcccgc tcgacgggac catcaccggc ggcaccgggc gaggagcctg
     2041 gccgggccgt cgaaccggct gctgcaggcc ctgctccaag tagcggatga ccagctcacg
     2101 cactttgagg ccgctgctgg cggcgcgggc cttgagggtg cggtagaggt cgttcggcag
     2161 atcgaagctg gtgcgcatat tacaatattt ccatattaca ttaaatatgt caaggtgacg
     2221 caccggctgg tcggcgctcc cggatggtgc gatggttctt tcatcttacc gatggggccg
     2281 atgacccaga tgctcgcccg gctcggcgcc gtgctcgccg accgatagca gctcgaccgc
     2341 gagctggggc aaggcggcat ggccaccgtc tacctggccc atgatccgcg gcacgagcgc
     2401 aaggtggcga tcaaggtcct ccaccccgag ctggccgcgg tgatcgggcg cggccgatgg
     2461 cgtcctctat tacgtgatgc ctacgtcgag ggcgaaacgc tgcggggccg cctcacccat
     2521 gagaaacagc ttccggtcga cgacgcgatc cggctggcaa gagaggtggc cagcgcgctc
     2581 gattacgccc accgccggcg gcgggcgcct gaccgagacc gggttgagcc tgggcacgcc
     2641 gcactacatg agccccgaac aagcgacggc ggagaagagc ctgtcgaatc gttcggacat
     2701 ctactcgtta ggcgcggttc ctctacgaaa tgctgaccgg caacccgccc cacaccgggg
     2761 tctggcccag cagatcatca tgaagattcc ggagatcgag tcgatcatgc cgtgacgcat
     2821 gaggggcaat acggacacgt cccttctaag gtgccagatc gcggccaacg tgccctcatg
     2881 gtgattcgga cgtggtaccc tcctcagaat acggagccgc attcgcctaa cagttcgccg
     2941 acagctacct ccacctaagg taacgagctc gccattgacg gtcaccggtg ggacgagggc
     3001 agcggcttcg ctcatcgctt ggtgatctcg gcaacccaga tgtcgctctg gcggtcttcg
     3061 atcgtgaaat agaaccgcct gccatcggtg gcaaaatcgg gccggctcga ggggcgagtc
     3121 ggatcgtcga accgcaccag gaggcgtggc cgtcctccgg acggcgggag cgcccagaac
     3181 gacgctcttc cctcagggtc gaggctcttg aaatagatgg tccgcccatc gcggctccac
     3241 tccgcccgct ccaccggcgg gtcgctcgaa ccggacctcg gctggtacac gagacggggg
     3301 cttccaccat ccgccggaat gacggcggct cccttggtag aggtagtcgt cccgagcacc
     3361 agccggccgt cgggggacca ggatgggaag tccatctcct tggccaggag ggtcggcgtg
     3421 ccccacgccc cgtccggcct gcgccgaacg atgtaggcac cattgaatgg tggctgatca
     3481 aagatcacta gcgcggtgcc gtcgggggac cagaccggaa agctctcatg ggagggagtc
     3541 gaggtgacct gctgggcggc gcccccgtcc agcgagcgga ccacgatgtc gcgggttccg
     3601 gtccggaagg agtgaaacgc gaaggcccgg ccatccggtg agagatcggg agcaaactca
     3661 tcgctgggat cactggtgag ctgctccggt tcgccgcccg ccagggggat gcggtagatg
     3721 tccgcattgc catgaaggtc ggagtcgtag agcagccagc gaccgtctcg ggagactcgg
     3781 atcgactcga tgatctgagt gccggaggta accggaacgg cgccgccggt cgagaccggc
     3841 ccattcgccg gaatcggcag ggtccagaca tttgctcgcg cggtgtaggc ggaatagatg
     3901 agccgggtcc cgtcggccgt gaggccgatg gattgggcgc cgagcccggt ggttaggcga
     3961 atgggttgcc ctccgggccg gcccgcggcc gtgacgggca ggacgtagac atcgcgcggg
     4021 ccctggtggt tggagacgaa gtagagcgac cggccggcgg aggaccacgc gggactctgg
     4081 ccgagcgtgc tcccgtcggt taccggtata ggcgcacccc cctccaggcg gaccaggaga
     4141 acctgactcg gcgccaggtt tccgaaccgg cgtccgaccc ggacgaaatc ggagttgccg
     4201 gacacgcagg cgatgacacg gccggtcggg gaccaggcgc acgaatggag ccagtctccg
     4261 ggatcggtga gcgtgaccag gccctgctcg gcccactgat tcgccaggag cagtcgggtc
     4321 gctccgtcct caacggtacg aacctggagc gagtcgcccc gcacgaacag gatctggcct
     4381 ccatccgggg accagtccgc tacggtcacc ggtgcatccg ggcggcccgg aacgagcggc
     4441 cgggcggacc cgcccaaggc cggcgctacc agggcgccac cccgggcgag gaagaggatg
     4501 ctggcgccgt caggagacca gcgcggattg gtctgcatgg agcccgggtc gtccatgagc
     4561 ggaatagtcc ggcctcctcc gatcggccga atgaagatcc gcatgcgctg cgagccgccg
     4621 gcggcgtagg cgacgaactt cccgtcgggc gagatggccg gatggatctc gagtcccgcg
     4681 tcggcggtca cctgagtggc cttgccgagg accacgggtt ggagtctcga gctgctgcgc
     4741 cgcgccaagg cgaccgcccc gaccaccccc gcgccgacca ggaccgcccc gaccgcgagc
     4801 gtcgcgaacg agcggcgagt gcgccgcccg acgtcccctt cactgcggct ggcactcgag
     4861 atcgaggccg ttacggcgtg agcaaattcc cccgcgctcg ggaaccggtc cgccgggact
     4921 ttggccagcg ccttggccat cgcctgatcg agcgcctcgg ggatggtatc ccgtaccgtc
     4981 cggagccggg tgggcttctc ggttagcagc ttggcgatca ccgcctgcgc ggtggctccc
     5041 gaatgcggcg cctcgccggc cagcatttca taaagcaccg ctcccagaga gtagacatcg
     5101 gagcgggcat ccggctgacg ctcgccggtc gcctgctcgg gactcatgta ctgcggcgtc
     5161 ccgagcgaca ggccggtctc cgtgagccgg cttccgcccg cctctttcac cgccaaggcg
     5221 atgccgaagt ccgtcagcat cgcctctccc tcgaagagca ggatgttctc cggcttgatg
     5281 tcccggtgga tcacgccctg gcgatgagcg tagtcgagcg ctccagcaat ctgccgcgcg
     5341 atccgaagcg cctcttcgat ccccaactgt ttctcgcgcc cgagccgggc ccgcagcgac
     5401 tcgccccgga catagggcag cacgtaccag aggaaaccct cgctcgcgcc ggaatcaatc
     5461 agggtcaaga tgtgggggtg atcgaggcgg gcggtgatcc ggatctcgtt cagaaaccgg
     5521 tcggcgccca ggatggcgct caagtccggg cgaagcacct tgagcgcgac ctcgcggtcg
     5581 tgcttgagat cgcgggcgag atacaccgtg gccataccgc ccgcgccgag ctgacgctcg
     5641 atgtggtact ggtcggcaag ggcggtggcg acgcggccgg tgtcggtcat cgctcgctga
     5701 atcctaaccg tcgatgggta ttccgaatct tccgaccgaa gcgggtttgg tgttgggtca
     5761 gggccggcct cggttgccgg gggacgtcct agaatcggcc tgccggggag ggggcgcaag
     5821 agtagcgtgg ggcgagtggc atacccgcct tcggcgagcg gcgcggcgac tacggacggc
     5881 cgagtggctc tggacaccgt ctcgagcttc gtgggtggag cggagaacct gcggctgcgc
     5941 ttctatccca cccgcggggg tcgcgcggac ctggtgcccg cgtggatcca ggaacagaag
     6001 ataccggacc aatcggccgg gagccatcag tctcaggacg gctgtcaccc ttggttgggg
     6061 agggattcct ctgccacgtg atgcggtaag cgcggagagc aggccgagag atagacgacg
     6121 gggagggtct gctggtctgg accttcgccg gtggagccaa ctggcccgtc tagggcgcgg
     6181 gaatgacgtg gaagcccgcg acggtgaaat ggtggtccaa cgtgagcgcc tcaccgatat
     6241 cgcgggagcc catcaccgta aagctgaccg catcggtgaa cgagaaatcc tgatccacgt
     6301 atcgctccaa ccagtcctct atcgcctgcg tctccagggc aggatcgctc gatatcacca
     6361 ggttgggctg gtgccgcacc gttcgggcaa aggccagggc gacgtcccgc cccacccgcc
     6421 gaagcaacaa ggcatgggtt tccgcgatca ccaggttcgt ggtgacgatt cgcgttcccc
     6481 gcttgaccgc accagtgagc tcggcggcga tcggccggtg atccgggtgg cttcggacca
     6541 cggccggata ccaggcgctg gtgtcgacga agagctcacc cggcagagcg actccacccc
     6601 ttctcttcct cgtcggtcag cacccggtcg tgctcccggg ccgcgtcggt ccgccggccg
     6661 gctcgctctc ggttggccag gccgatcacc tgcagggcgg gatgattgcc cggatccagc
     6721 acggcccgct ccaacgcctc gagcccctgc cggaggatgt cggaccgggt cgcctcgagc
     6781 tgggccgcca gccgggccag ccgggcccga gcttccgagt ccaggtagac ctggactgga
     6841 gccgactctc gtcgcccgcg cttgcgcctt gccatcattc atgaatcatg atgtagt
//
LOCUS       DASWKS010000410         4080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_951139, whole genome shotgun sequence.
ACCESSION   DASWKS010000410 DASWKS010000000
VERSION     DASWKS010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951139"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VGA78_11715"
     CDS             <1..303
                     /locus_tag="VGA78_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9894585.1"
                     /translation="IALAGIIVRNSILLVDFIQLAQERGRSLREAVIEAGSVRFRPIA
                     LTAAAVVAGGAVMVLDPIFQGLAVALISGAIVATALTMAVVPLLYWELASRKETTP"
     gene            300..590
                     /locus_tag="VGA78_11720"
     CDS             300..590
                     /locus_tag="VGA78_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894586.1"
                     /translation="MKLLLLIYSGDSPERITGLLDRHQVEGYTELSGAHGTGRTGRRF
                     GTRAWPGRNTVFFSIVPAEAEAGVVAAVLAESRQLPEGERLHVAVLPVSYAA"
     gene            612..815
                     /locus_tag="VGA78_11725"
     CDS             612..815
                     /locus_tag="VGA78_11725"
                     /inference="COORDINATES: protein motif:HMM:NF022577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEX9894587.1"
                     /translation="MRCEMIIRRFAGSFVLASLALGWLVDPRWFLVTVFVGLNLLQSS
                     FTRFCPLERILVRFRRFGCAPQA"
     gene            842..1162
                     /locus_tag="VGA78_11730"
     CDS             842..1162
                     /locus_tag="VGA78_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9894588.1"
                     /translation="MARLSPEAIDLVAERFRTLGEPTRLRLLNALRQGERSVGELVDA
                     IGATQANGSKHLQLLHAAGFVTRRREGTTVLYHLADPTVFQLCDLVCGRLDQTLEQKR
                     KALR"
     gene            1316..3910
                     /locus_tag="VGA78_11735"
     CDS             1316..3910
                     /locus_tag="VGA78_11735"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9894589.1"
                     /translation="MHRLLCLGQLSLVDGSGQPVSNAAAQPRRLALLALLGRSAPRAV
                     SRERLIGWFWPEADEERGRRSLNQALYALRTELGSEEVLLGQRDMRLNLDLVSCDVAD
                     FENAMESGRPEEAAGLYRGLFVDGFRLSSAPEFEQWVEDERRALVHRYAEGLEALAAA
                     AEQRGEPQTAVGWWRKAASADPASARLAIRLMRALVASGDRSGASRHATIYQTILEQQ
                     LELPADPAVLAYAEELTRAAVSGQPSFVPEPLVARGESLEVGSGAGVGVAVASPTVVP
                     ASSPPALETAAPSADRRRPRWRLVAVTALPMLGAVGMAAYLGTRPGPPGGDGPPVVAV
                     LPLQNSTGDSTYQLVGAMVTDWVTQKLAETGLVRVMDTRTLLTTQGDIRALATQTGAR
                     FLVIGKYYRLGDSLEFRTQITDAASGRILSTIDPLYAPASEPTGALTVLEERVTGALA
                     VQVDQRLNNWTASSSHPPTWAAYSEFLLGMRDFGRNRAYDSNFAHFARAARLDTTYWQ
                     ARLWAGISLANARRYPEADSVFRSVAARRGQLAPYDRAGLDYFHNGFVLGDREASYRG
                     AKVMVELAPLAGHSNWALGNTARSTRRAREAVEAYSRIPLDYGWGAEWAVRILGESAR
                     AQHVLGEHEDELANARRMLARSPDDGWARTTEVVALAALRRYDKLARRVEAAVTLPED
                     SGTWSPFSPGDLLFQVAQELRSHGAPTDTVQRYAEAAVQWYAAPTSAGLADTVHLLGH
                     ARASYGLGRWEEARELYQRLMAVNPESPEFVGGVGAASARLGDTVQAESTLRRLMAMQ
                     LPYPFGRPARAAATVAAALGRRDEAVRFLGKALREGTGRYNEWHAHPDFLSLNDYPPF
                     RALVAPRN"
BASE COUNT          616 a         1357 c         1409 g          698 t
ORIGIN      
        1 atcgccctgg ccgggatcat cgtacgaaac tcgatcctgc tggtggattt catccagctg
       61 gcccaggagc ggggccgttc ccttcgcgag gcggtgatcg aggccggctc ggtccgcttc
      121 cgtcccattg cgctgacggc cgccgcggtg gtggcgggcg gggcggtcat ggtgctggac
      181 cccattttcc agggcctggc cgtcgccctg atcagcgggg cgatcgtcgc cacggcgttg
      241 acgatggcgg tggttcccct gctgtactgg gagctggcca gccggaagga gaccaccccg
      301 tgaagcttct gctgctcatc tactcgggcg actcccccga gcggatcacc ggattgctgg
      361 accggcatca ggtcgagggg tacaccgagt tgtccggcgc ccacggcacc ggtcggaccg
      421 ggcggcggtt cggcacccgg gcctggcccg gacggaacac cgtgttcttc agcatcgttc
      481 cggccgaggc agaagccggt gtcgtcgcgg ccgtgctggc ggagtcgcgt caactaccgg
      541 aaggggaacg actgcatgtg gcggtactgc cggtcagcta tgccgcgtga agggctaacc
      601 gaggaggaga agtgcgttgt gagatgatca tccgccgctt cgccggcagc ttcgtgctgg
      661 cctcgctggc gctgggatgg ctggtggatc cacgctggtt cctggtcacc gtctttgtgg
      721 ggctcaacct gctccagtcg agtttcaccc ggttctgtcc gctggagcga atcctggtcc
      781 ggttccggcg cttcggctgc gcccctcagg cctgaccggc cgacgaccaa gcgagaacca
      841 aatggcccga ctgtcacccg aagcaatcga tctggtcgca gagcggtttc gcaccctggg
      901 ggagcccacc cgcctgcggt tgctcaacgc gctgcgccag ggggaacgct cggtggggga
      961 gttggtcgat gccatcggtg ccacccaggc caatgggtcc aaacacctgc agctactcca
     1021 tgccgccggc ttcgtcaccc gccgccgtga gggcaccacg gtgctgtatc acctggccga
     1081 ccccaccgtc tttcagctct gcgacctggt ctgcggccgg ttggaccaga ccctggagca
     1141 gaagcggaag gcgctgcggt agcagtcgaa gcggtcgaag cggtcgaagg gggtcgaagg
     1201 tggttggggg tcgcggagac gacatgccgg tgccatcttc gaataggagg tggtcggccg
     1261 gtttcgaccc tcttcgaccg ccttcgaccg cctgcgaccg tcttcgaccg tcagaatgca
     1321 ccgccttctc tgcctgggtc agctcagcct cgtggacggc agtggccagc ccgtcagtaa
     1381 cgccgctgcc caaccccggc ggctggcgtt gttggccctg ctgggacgct ccgcgccccg
     1441 ggcggtcagc cgggagcgac tgatcggctg gttctggccc gaagccgatg aggaacgagg
     1501 ccgccggtcg ctcaaccagg cgctgtacgc tctgcgaacc gagttggggt cggaagaggt
     1561 gctgctggga cagcgggaca tgcggctcaa tctggacctg gtgagctgcg acgtcgccga
     1621 tttcgagaat gcgatggaat cgggccggcc ggaagaagca gccgggctgt atcgcggcct
     1681 gttcgtcgat ggatttcgtc tcagctccgc gcccgaattc gagcagtggg tcgaagatga
     1741 gcgccgtgcc ctggtgcatc gctacgccga ggggctggag gcgctggcgg ccgcggcaga
     1801 gcaacggggc gagccccaga ccgcggtcgg ctggtggcgc aaagccgcta gcgccgatcc
     1861 ggccagcgcg cgactggcga tacggctgat gcgcgcattg gtcgcatcgg gtgaccgctc
     1921 cggtgcgagc cgtcacgcca cgatttatca gaccatcctg gaacagcagc tggaactgcc
     1981 ggcggacccc gcggttctgg cctatgcgga ggagctgact cgcgccgccg tcagcggtca
     2041 gccatcgttc gttcccgagc cgctggtcgc gagaggtgaa tcgctggagg ttgggtcggg
     2101 ggctggggtg ggggtcgcgg ttgcctcgcc aaccgtggtc cccgcttcca gcccgcccgc
     2161 tctcgagaca gcggcgccat cggccgatcg gcgccggccc cgatggcgtc tggtcgcggt
     2221 caccgccctc ccgatgcttg gagccgtcgg catggcggcc tacctcggaa cccgtcccgg
     2281 gccgccaggg ggtgacgggc cccccgtcgt cgccgttctc cccctgcaga attccaccgg
     2341 tgacagcacc taccagctgg tgggggcaat ggtgaccgat tgggtgaccc agaagctggc
     2401 cgaaacggga ctggtccggg tgatggatac ccgcaccctg cttactactc agggcgacat
     2461 tcgagccctc gccacccaga ccggcgcccg cttcctcgtc atcgggaagt actaccggct
     2521 gggagattcc ctcgagttcc ggacccagat caccgacgcc gccagcggcc gcattctgag
     2581 caccatcgac ccgctgtacg cgcccgcgtc ggagccgacc ggcgccctca cggtactgga
     2641 ggagcgggtg accggagcgc tggccgtcca ggtcgaccag cggctcaaca actggacggc
     2701 gtccagcagc cacccaccga cctgggcggc ctacagcgag ttcctgctgg gcatgaggga
     2761 cttcggtcgc aaccgtgcct acgactcgaa tttcgcccac ttcgcccggg cggcccgact
     2821 ggacaccacg tactggcagg cccgactctg ggccggaatc tcgctggcga atgcccgccg
     2881 gtatcccgaa gccgattcgg tgttccggag cgtggcggcg cgccgcggtc aacttgcccc
     2941 gtacgaccgc gccggtctcg actacttcca caacgggttt gtgctgggtg atagggaggc
     3001 ctcctatcgc ggtgcgaagg tgatggtgga gctcgctccc ctggcgggac actcgaactg
     3061 ggccctggga aacacggccc ggtcgactcg gagggcccgc gaagcggtcg aagcctactc
     3121 ccggatcccg ctcgattacg gctggggtgc tgaatgggcg gtgcgtattc tgggcgaatc
     3181 ggctcgggcg cagcacgtgc tcggcgagca cgaagacgag ctcgccaacg cccggcgcat
     3241 gctagcgcga agcccggacg acggttgggc ccggaccacc gaagtcgtgg ccctggccgc
     3301 cctgcgacgc tacgacaagc tggcccgccg ggtcgaggcc gcagtaaccc ttcccgagga
     3361 ttcgggaacc tggagcccct tctcgcccgg cgacctgttg ttccaggtgg ctcaggagct
     3421 caggagccac ggcgccccga ccgacacggt ccaacgctat gccgaggcgg cggtgcagtg
     3481 gtacgccgct cccaccagcg ccggtctcgc cgacacggtc catctgctgg ggcatgcccg
     3541 ggccagctac ggcctgggcc gttgggaaga ggcccgggag ctctatcagc gattgatggc
     3601 cgtcaatccc gagtcgcccg agtttgtcgg tggcgtcggg gcagcctcgg cccgcctggg
     3661 ggatacggtg caagcggaat cgacgctgcg ccgactgatg gccatgcaac tgccgtatcc
     3721 gtttggcagg ccggcgcggg cggccgccac cgtcgccgcc gcgctgggtc gccgcgacga
     3781 ggcggttcga ttcttgggca aggcccttag ggaaggaacg ggtcgataca acgagtggca
     3841 tgcacacccc gattttctgt ccttgaacga ttacccgccg tttcgggcct tggtggcccc
     3901 gcgaaactga ttcccgctcc gccactccgg ttccacgcca tctgacgctt accgcatatc
     3961 ccattgtcga atcatgagtt atccctgttg atatagggat gattccgggt tggtaccaat
     4021 ccatagactg gcttccgcgc cgcgccatgg aggcgaggca gggggtcggt ctttcatgcc
//
LOCUS       DASWKS010000411         3778 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_951687, whole genome shotgun sequence.
ACCESSION   DASWKS010000411 DASWKS010000000
VERSION     DASWKS010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951687"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1991
                     /locus_tag="VGA78_11740"
     CDS             267..1991
                     /locus_tag="VGA78_11740"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HEX9894590.1"
                     /translation="MDWRQRLEIETPEHVALDYELAGLGSRGLAAILDTVILTLFTLA
                     SVIALGLLVPVRGVVVEVLLVLLLFLTLWGYFTFFEAFRDGQTPGKRWMGIRVVHDTG
                     HALTFGGAALRNLLRIADFVPPPYLIGGLMVALHPRAKRLGDLVAGTVVIRDQPQQAL
                     AATPAPEPEILGAPLLGDEEFALLKSFRERAVELRPPVRARLAAQVATRLADRLAPFE
                     GEPEPALEELFRQESARRRGRFGAGRRLGADRFVAQKEARWSEFDRIARAVTARGLDA
                     LQARELPDFAARYREIAADLARARTYGAGPAAIARLERLVAAGHNALYRRERTTAGNV
                     LRFLLRECPAAVVASWRYVALAAAVFILPGVAGYVVLRERPPLALEVLPDALLERAAA
                     GAERTARGQGYFEAPPGERPLVASSIITNNVGVAFRCFAGGIFAGVGALVMLAFNGLM
                     IGAASGHFANQGLLGYLWTFVAGHGVLELFAIWVAGAAGFLLGRALIAPGNLSRGDAL
                     VLSGRIGLRLVVAATLMLLVAGAIEGFISASGLPLSLRVAASAGSVVLLVVYLTTGLR
                     TKDLGLRT"
     gene            2113..2673
                     /locus_tag="VGA78_11745"
     CDS             2113..2673
                     /locus_tag="VGA78_11745"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9894591.1"
                     /translation="MNQTVTLTVNGTPRTLAVEPRTLLVHLLRDELNLTGTHVGCDTS
                     QCGACTVLLDGRAVKSCAVLAVQAADRAVTTIEGLSSNGSLHPLQQAFWDKHGLQCGF
                     CTPGIIMMAAEFLESNTDPSEAEIRHALEGNLCRCTGYQNVVAAIQAAAATLREQRAA
                     PRDTTSASPARDVARPSRSPAGAPVA"
     gene            2685..>3778
                     /locus_tag="VGA78_11750"
     CDS             2685..>3778
                     /locus_tag="VGA78_11750"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9894592.1"
                     /translation="MPTLFGSGIRRREDPRLLMGKATYTDDVKLPGLCYAAILRSPYA
                     HARIRSIDVAAARHTPGVVAVYTGADVKDRLVPVPCAWNVPNCDLKVPAHPLLADETV
                     RYVGDGVAMVVAESRAAARDALDLIEVDYASFDAIVDPEAATRPGAPQLHSDVPRNIA
                     FTWKVAGGDAEKAFAEAEVTVKLRIVQGRLQPTAMEPRAAVASYNGGTGQLTLWVTSQ
                     NPHIHRFLCSVMLKLPEHRVRVIAPEVGGGFGSKIPVYADEALVSLASMDTGRPVKWT
                     EDRSENYKATIHGRDHIEYVELCGTKDGRITGLRTEVYAGLGAYASTAAPGVPTILHG
                     LIYPGPYTIPNVQGTIYGVYTSTTPVDAYRG"
BASE COUNT          579 a         1302 c         1271 g          626 t
ORIGIN      
        1 tcggctccga ggccggcccg ccccgctgct cgatatacac atccacgatc aggggcagcg
       61 ccccggtcac cagccccacg atgaccaggc tgccgaagag ctggcggtac agcgcgaagg
      121 acacgtcgag cagctcgccc agcgccagcg gtcgcagtgt ggggtggggc atgggctccg
      181 tcgggggagt cggaaccaga agataaccaa ccaccactca gtactgagga ctgagtactc
      241 agtgatcagt actggtagtt tgaaggatgg attggcgtca gcgactcgag atcgagaccc
      301 cggagcacgt ggccctcgac tacgagctgg cagggctcgg ctcgcgcgga ttggccgcga
      361 tactggacac cgtgatcctc acgctgttca ccctcgcgtc cgtgatcgca ctgggtctgt
      421 tggtcccggt gcgtggcgtg gtggtcgagg tcctgctggt gctgctgctg ttcctcactt
      481 tgtggggtta cttcaccttc ttcgaagcgt ttcgggacgg ccagacaccg ggcaagcggt
      541 ggatgggtat tcgcgtggtc catgataccg gccacgccct gacgttcggc ggggccgcgc
      601 tgcgcaacct gcttcgcatc gcggacttcg tgccaccacc ctatctcatc ggcgggttga
      661 tggtcgcact ccatccccgc gccaagcgat tgggtgatct ggtggccggc acggtcgtga
      721 tccgcgacca gccgcaacag gcgctggcgg cgaccccggc accggagcct gaaatcctcg
      781 gcgccccgct gctcggcgac gaggagttcg cgctgctcaa gagcttccgg gagcgagccg
      841 tcgagctgcg gcccccggtg cgagcccgat tggcggcgca ggtcgccact cgcctggcgg
      901 accggctggc gccgttcgag ggagagccgg agccggcgct ggaggaattg ttccgccagg
      961 aatcggcccg gcggcgaggg cgcttcgggg ccggccgccg gctcggcgcg gaccgattcg
     1021 tcgcgcagaa ggaagcccgc tggagcgagt tcgaccgcat cgctcgcgcc gtgacggccc
     1081 ggggactcga tgccctgcag gccagagagc tgccggactt tgccgcgcgc taccgcgaga
     1141 ttgccgcgga cctggcccga gcccgcacct atggagccgg gcctgccgcc atcgcgcgcc
     1201 tggagcgtct ggtcgccgcg gggcacaatg cgctctatcg ccgggagcgg accaccgccg
     1261 ggaacgtcct gcggtttctg ctgcgggaat gtcccgccgc agtggtggcc tcgtggcgct
     1321 acgtggccct ggcggcggcg gtcttcatcc tccccggcgt ggccggatat gtggtactgc
     1381 gggaacggcc gccgctcgcc ctggaggtgc tgcccgacgc cctgctggaa cgggccgcgg
     1441 ccggggcgga gcgcaccgcc cgggggcagg gatacttcga ggcgcccccc ggagaacgac
     1501 ccctcgtcgc cagcagcatc atcaccaaca acgtcggggt ggcttttcgc tgcttcgcag
     1561 ggggcatctt cgccggggtc ggcgcgctgg taatgctggc cttcaatggt ctcatgatcg
     1621 gggccgcctc cggccatttc gccaatcagg gactgctggg ctacctctgg accttcgtgg
     1681 ccggacacgg ggtcctggag ctgttcgcca tctgggtggc gggggcggct ggtttcctgt
     1741 tggggcgggc cctcatcgca ccggggaatc tctcccgagg ggacgccctg gtgctctccg
     1801 ggaggatcgg attgcgcctg gtggtggccg ccaccctcat gctgctggtg gcgggagcca
     1861 tcgaaggatt tatctccgcc tccggcctgc cgctcagcct gcgcgtcgcc gccagcgcgg
     1921 ggagcgtggt tctcctggtt gtctacctga ccacaggact taggaccaag gacttgggac
     1981 taaggactta ggactaggta agtagcaagg agcaacttgg tcctaagtcc taagtcctta
     2041 gtcctgaagc gccgttggcg ctttcgagaa tgcccccata tactcccctt cccgcccccc
     2101 ggagcccggg tcatgaacca gaccgtcacc ctcactgtca acggcacgcc gcgcaccctc
     2161 gccgttgagc cccgcaccct cctggtccat ctgctgcgcg atgagctgaa cctgaccggg
     2221 acccacgtcg gctgcgacac cagccagtgc ggagcctgta ccgtgctgct cgatgggcgg
     2281 gccgtaaaga gctgcgccgt cctcgcggtc caggccgccg accgggccgt caccaccatc
     2341 gaaggcctga gctccaacgg ctcgctgcat ccgctgcagc aggccttctg ggacaagcac
     2401 ggcttgcagt gcggcttctg tactccgggc atcatcatga tggccgccga gtttctggaa
     2461 tcgaataccg atcccagcga agccgaaatc cgtcacgcgc tggagggcaa tctctgccgc
     2521 tgcaccggct atcagaacgt ggtggcggcc atccaggccg cggccgccac gttgcgggag
     2581 cagcgggccg ccccgcgtga caccacgtcc gcgtcccccg cgcgcgatgt tgcccggccg
     2641 tcccgcagcc cagccggcgc gccggtcgcc tgaaggagac cacaatgcca accctgtttg
     2701 gttccgggat tcgccgccgg gaagatccgc ggctgttgat gggcaaggcc acctacaccg
     2761 atgacgtcaa gctgccgggc ctctgttacg cggctatcct gcgcagcccc tacgcccacg
     2821 cccggatccg ttcgatcgac gtggccgcgg cgcggcacac gccgggcgtg gtcgcggtct
     2881 acaccggcgc ggacgtcaaa gaccgcctgg tcccggtccc gtgtgcctgg aatgtcccca
     2941 actgcgatct caaggtgccg gcccatccgc tgctggcgga tgaaaccgtg cgctacgtcg
     3001 gggatggcgt ggcgatggtg gtggccgagt cacgggccgc ggcccgcgac gcgctcgacc
     3061 tgatcgaagt ggactacgct tcgttcgatg ccatcgtcga tcccgaggcg gccacgcggc
     3121 cgggtgcgcc gcagctgcat tccgatgtcc cgcgcaacat cgcgttcacc tggaaggtgg
     3181 ccgggggtga cgccgagaag gcattcgccg aggcggaggt cacggtcaag ctgcgcatcg
     3241 tccagggacg gttgcagccc accgccatgg agccgcgggc cgcggtcgcc agctacaacg
     3301 ggggaaccgg ccagctcacc ctctgggtca ccagccagaa tccccacatc catcgctttc
     3361 tctgctcggt gatgctcaag ctccccgagc accgggtccg ggtcatcgcc ccggaagtcg
     3421 gcggcggatt cggcagcaag atcccggtct atgccgacga ggcgctggtc tccctggcct
     3481 cgatggacac cggccggccg gtcaaatgga ccgaagaccg ttcggagaac tacaaggcga
     3541 ccattcacgg gcgggatcac atcgagtacg tggagctgtg tggtaccaag gacgggcgaa
     3601 tcaccgggct ccgaaccgag gtctatgccg gcctgggggc gtatgcctcc accgcggcgc
     3661 ccggagtacc caccattctg cacggcctga tctaccccgg cccgtacacc attcccaacg
     3721 tgcagggcac catctacggc gtctacacca gcaccacacc ggtcgatgcc taccgcgg
//
LOCUS       DASWKS010000412         3328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2806776, whole genome shotgun sequence.
ACCESSION   DASWKS010000412 DASWKS010000000
VERSION     DASWKS010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2806776"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..931
                     /gene="lpxB"
                     /locus_tag="VGA78_11755"
     CDS             <1..931
                     /gene="lpxB"
                     /locus_tag="VGA78_11755"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEX9894593.1"
                     /translation="GFFEVLAKLPAHIRLYRSVVRDFRAGRYDLLVAVDYPGFNIRLA
                     EAARRSGVRSLYYIAPQLWAWRPERARRFAGATDRVAVILPFEPEFFGRVGVRAEFVG
                     HPLVEHPPPARAQARVTLGLHENDRVLAIFPGSRNQEIARLWPVFRTAAQRLLQDGAC
                     TRVVIAGTAGREYPGSGTMLVHQGDGATVLASADAALVKSGTTTLEAALADTPMVVAY
                     RVHPLTAAIARRLMTVPWISLVNLVAGRAVVPEVVQGAANGDTLAGLVRPLLADGDAT
                     RAQHAALAEVRARLGTPGAATRVAAMAEELLAA"
     gene            928..1581
                     /locus_tag="VGA78_11760"
     CDS             928..1581
                     /locus_tag="VGA78_11760"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX9894594.1"
                     /translation="MKIRLPRALVQWGAGPLVTGIASTWRMEVRHGERWQAARATSGP
                     RLFLLWHEALLPLLWHHRHQGIAIVVSRARDGQYLIDYALRLGYQAIEGSSHRGKVAA
                     MRGSLRALEEGALVAITPDGPRGPRRKLKTGGLAAAQSTGATVFTAHAEARPARRLRS
                     WDRFVIPAPFARVRVTYGPAFTVGPGADGIRDAAERAVRDLAALEQEIAWPGATPTA"
     gene            1554..2588
                     /gene="lpxK"
                     /locus_tag="VGA78_11765"
     CDS             1554..2588
                     /gene="lpxK"
                     /locus_tag="VGA78_11765"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEX9894595.1"
                     /translation="MARGDAHRLIRWLWTSRRPDARLARLGLLPVSAAWRVAMDLRAM
                     AYRRGWASQRELPLPSVAVGNLTVGGSGKTPIAGWIASYYAGIGYKPGILLRGYRGGD
                     EVLVHQHEVPGAAVVADPDRLAGAERALAEGAQILVLDDAYQRLDVWRDLNLAVVSAE
                     TTRAVRWSLPAGPWREGLHALGRADGLVVTRKRADASSAMALAGELSSRVRGPVAVVH
                     LQVQWYEGLLSGRRVAAEELTGKRVVAASGIGDPEAFIAQTKATGAQVQAATWRDHHG
                     YRDEDVAWLAKAARKADYVVMTQKDAVKLRNRWPASVPEPLVAALDLEWEEGHDALVQ
                     ALHAVVMRLE"
     gene            2651..>3328
                     /locus_tag="VGA78_11770"
     CDS             2651..>3328
                     /locus_tag="VGA78_11770"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEX9894596.1"
                     /translation="MTTRQPTQIIRPDRDQRFRHHEKPFEAMMSRFDDAAHRLGLDKG
                     LYSILRHPEKQLAVSVPVMRDNGQIEVFTGYRVIYNTARGPGKGGIRFHPDVSLDEVT
                     ALAAWMTWKCAVVNIPFGGAKGGVICDPLTMSAVELERLTRRYTSGIMAFLGPDSDVP
                     APDVNTNERVMAWLMDTYSMHVCHTVTSITTGKPVVMGGSLGRREATGRGCMITTRSA
                     LRRLGIPF"
BASE COUNT          494 a         1104 c         1217 g          513 t
ORIGIN      
        1 cgggttcttc gaggtgctgg ccaagcttcc ggcccacatc cggctctacc ggagcgtggt
       61 ccgggatttc cgcgccggcc gctacgatct gctggtcgcg gtcgactatc ccgggttcaa
      121 catccggctg gccgaagcgg cccgccgatc gggagtgcgg tcgctctatt acatcgcgcc
      181 ccagttgtgg gcctggcgcc cggagcgggc gcggcgcttc gccggtgcga ccgaccgggt
      241 cgcggtgatt ctgccgtttg agccggaatt cttcggccga gtgggcgtgc gggcggaatt
      301 cgtgggccac cccctggtgg aacacccgcc gccggcgcgg gcccaggctc gggtgacgtt
      361 aggcttgcat gagaacgatc gggtcctggc gatctttccc ggcagccgaa accaggagat
      421 cgcccggctt tggccggtat ttcggaccgc ggcccaacga ctgctgcagg acggggcctg
      481 cacccgcgtg gtgatcgccg gcaccgccgg gcgggagtat cccggaagcg ggaccatgct
      541 ggtgcatcag ggggatggtg cgaccgtgtt ggcctcggcc gatgccgcct tggtcaagtc
      601 ggggaccacc acgctcgaag cggcgctggc ggacactccc atggtggtgg cctatcgggt
      661 gcatccgctc accgccgcga tcgcccgccg gctgatgacc gtgccgtgga tcagcctggt
      721 gaacctggtc gcggggcggg cggtggtgcc ggaagtggta cagggagcgg cgaacggcga
      781 cacgctggcc ggcctggtcc gacccctgct ggctgacggc gacgccaccc gggcccagca
      841 cgccgccctg gcggaagtgc gagcccgtct cggcacaccg ggagccgcga ccagggtggc
      901 ggccatggcc gaagagctcc tcgccgcgtg aagatccgcc tgccacgtgc cctggtacaa
      961 tggggcgcgg ggccgctcgt gacgggcatc gcctccacct ggcggatgga ggttcgacac
     1021 ggcgagcggt ggcaagccgc ccgggcgacg agcgggcccc ggctattcct gctgtggcac
     1081 gaagcgctac tacccttgct gtggcatcac cggcaccagg ggattgccat cgtggtgagc
     1141 cgggcccgag atgggcagta cctgatcgat tacgccctga ggctgggata tcaggctatc
     1201 gaggggtcga gtcaccgggg caaggtagca gccatgcgcg gcagcctccg cgcccttgaa
     1261 gagggagcgc tggtggcgat cactcccgac gggccccgcg ggccacgccg gaagctcaag
     1321 accggcggcc tggccgcggc gcagtcaacc ggtgccacgg tgttcacggc gcatgcggag
     1381 gcccggcccg cgcgccggct ccgttcgtgg gaccgcttcg tgatcccagc gccgtttgcc
     1441 cgggtgcggg tgacctatgg ccccgccttc acggtcgggc cgggagcgga cggaatccgg
     1501 gacgccgccg agcgggcggt gcgcgacctg gccgctctgg aacaggagat tgcatggccc
     1561 ggggcgacgc ccaccgcctg atccgatggc tgtggaccag cagacgcccc gacgcgcggc
     1621 tcgcgcggct ggggttgctg ccggtttcgg ccgcctggcg ggtagccatg gaccttcggg
     1681 ccatggccta ccggcgaggc tgggccagcc agcgggagtt gccgttgccc tcggtagcgg
     1741 tggggaacct gacggtcggc ggctccggga aaaccccgat cgcggggtgg atcgcctcgt
     1801 attacgcggg catcgggtac aaaccgggga tcctgctgcg gggctaccgg ggcggcgacg
     1861 aggtgctggt gcatcagcac gaggtgccgg gcgccgcggt ggtggcggat cccgatcggc
     1921 tggccggtgc cgaacgcgcg ctcgccgagg gagcccagat cctggtgctg gatgacgcgt
     1981 atcagcggtt ggacgtctgg cgggacctga acctcgccgt ggtcagcgcc gagaccaccc
     2041 gcgcggtacg ctggtcgctc ccggcaggtc cctggcgtga aggcctgcac gccctgggtc
     2101 gggccgacgg gctggtggtg acccgcaagc gcgccgacgc cagctccgcc atggccctgg
     2161 cgggtgagct ctcgagccgg gtccggggac cggtcgcggt ggtgcacctg caggtgcaat
     2221 ggtacgaagg tctgctgagc ggtcggcggg tggcggccga ggagctcacc ggcaagcgag
     2281 tggtcgccgc ctccggcatc ggcgatcccg aggcgttcat cgcgcagacc aaggcgaccg
     2341 gggcccaggt gcaggccgcc acctggcggg accatcacgg ctaccgcgat gaagacgtgg
     2401 cctggctggc caaggccgcc cgcaaggccg actacgtggt gatgacccag aaggatgccg
     2461 tcaaactccg caatcgctgg cccgccagcg tgccggagcc gctggtggcg gcgttagact
     2521 tggagtggga ggagggacac gacgcgctgg tccaggcgtt gcacgcggta gtgatgcgac
     2581 tggagtgaac tcaaactact gagtactgag tactcagcac tcagtcctca gtactttcct
     2641 tttgaggttt atgactacaa gacaaccgac ccagatcatc cgtcccgacc gcgaccagcg
     2701 gttccggcat cacgagaaac ccttcgaagc gatgatgtcg cgcttcgacg acgccgcgca
     2761 ccggctgggg ctcgacaagg gcctgtactc catcctgcgc caccccgaga aacagctggc
     2821 ggtgtcggtg ccggtgatgc gggacaacgg ccagatcgag gtgttcaccg gctaccgggt
     2881 catctacaac acggcgcggg gtccgggcaa gggcggcatc cgcttccatc ccgacgtctc
     2941 cctggatgag gtcaccgcgc tggcagcctg gatgacctgg aaatgcgccg tcgtgaatat
     3001 cccgttcggc ggcgccaagg gcggggtcat ctgcgatccg ctcaccatgt cggccgtcga
     3061 gctggagcgg ctcacccggc ggtatacctc cggcatcatg gcgttcctcg ggcccgattc
     3121 ggatgtgccc gcgccggacg tcaacaccaa cgagcgggtc atggcatggc tcatggacac
     3181 gtactccatg cacgtgtgcc acaccgtcac cagcatcacc accggtaaac cggtcgtcat
     3241 gggcgggtcc ctgggccggc gcgaagccac tggacggggc tgcatgatca ccacccgctc
     3301 ggccctgcgg cggctcggca ttccgttc
//
LOCUS       DASWKS010000413         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_952474, whole genome shotgun sequence.
ACCESSION   DASWKS010000413 DASWKS010000000
VERSION     DASWKS010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952474"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..659
                     /locus_tag="VGA78_11775"
     CDS             303..659
                     /locus_tag="VGA78_11775"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9894597.1"
                     /translation="MLLVDDDPDMRHYLRTCLRSPGLDVERVLEAADGVEALRLARLG
                     GVHLVISDIVVPGIDGRALCRAIREHPELDEIAVLLISGEDGAGAAEVDADGFLAKPF
                     NSQQLLAALEGLLPER"
     gene            683..1270
                     /locus_tag="VGA78_11780"
     CDS             683..1270
                     /locus_tag="VGA78_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894598.1"
                     /translation="MLSVRLAGLAALLVVTALPATAQQPAVPPELAAVRTQLDKYRDP
                     IVAVHDGYLSSVGCIEYPKGATEGSMKYPAGGMGVHFLNFQYVGPTLDPSKPQVLIYE
                     PVGDSLRLVAAEWFMPAELAGSSRPTVFGKALEGPMEGHQPLMPPGFHHYDLHVWLWK
                     ENSEGVFSPTNPAIRCPVKGYSFAETAPKMVHPHR"
     gene            1282..>1645
                     /locus_tag="VGA78_11785"
     CDS             1282..>1645
                     /locus_tag="VGA78_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894599.1"
                     /translation="MRSELSGVSVVAAALLAGCAPATGEKAINEAGALPTWTYDSTLV
                     FPADRSLTRPEDGISLPDGRLIVSDQIHGLRQIEIDGTSRPFGNLAAAGYSHHPPAHN
                     GGANGMSLEPGGTHLLLAD"
BASE COUNT          269 a          551 c          541 g          284 t
ORIGIN      
        1 gccttcaagg aactgtacgg cgtgcgccct tccggctggc gatccgagcg cggtcggcag
       61 ggcatcgtac gctgaatccc tggacgaagt cttcatgcgc accggtcacc ggcggttgcg
      121 gattcgtcat atgtgaccac cccgcaagtc tctggtacct ggctgctacc gccctcatac
      181 ccggtcgtgc caccttgagg ggtagctcgg gacagcaccg agcaaccatc taccacgata
      241 tcccagctcg gcattctcac cggaccgtga cgtccgtatg ggggggtccg atcccgctca
      301 ccgtgctgct ggtcgacgac gatcccgata tgcggcacta cctgcgtacc tgcctgcgca
      361 gcccgggact ggacgtcgag cgggtgctgg aggccgccga tggggtggag gcgctgcgcc
      421 tggcgcgatt gggcggcgtg catctcgtca tcagcgacat cgtggtcccg gggatcgacg
      481 gccgcgcgct gtgccgcgcc atccgggaac acccggaact ggatgagatc gccgtgctgc
      541 tgatcagcgg cgaggacggc gccggcgcgg ccgaggtcga tgccgacggt ttcctcgcca
      601 aaccgttcaa cagccagcaa ctgctggccg cgctcgaggg cttactcccg gaacgctgaa
      661 tccttcgctc aaaggagcca ccatgctgtc cgtccgactc gctggactcg ccgctctcct
      721 ggtcgtcacc gcgctgccgg caaccgcgca gcagccggct gtgccgccgg agctggccgc
      781 cgtccgcacc cagctcgaca agtaccgcga tccgatcgtc gccgttcacg acgggtacct
      841 ctcgtcggta ggctgcatcg agtacccgaa gggtgccacc gaagggtcga tgaagtaccc
      901 ggccggcggc atgggggtgc acttcctgaa cttccaatac gtaggtccca cgctcgaccc
      961 gtccaagcca caggtgctga tctacgagcc ggtcggcgat tcgcttcggc tggtggcggc
     1021 ggagtggttc atgcccgcgg agttggcggg ttcctcacgg ccgacggtgt tcgggaaggc
     1081 gctggaaggc ccgatggagg gtcaccagcc gctgatgccg cccggattcc accattacga
     1141 cctgcacgtc tggctctgga aagagaactc ggaaggggtc ttctccccga ccaacccggc
     1201 gatccgttgt ccggttaagg ggtactcgtt cgcggagacc gccccgaaga tggtgcaccc
     1261 gcaccggtag gaggaaaacc cgtgaggagt gagctgtcag gggtaagcgt tgtggcggct
     1321 gcgctgctgg ccgggtgcgc tcctgccact ggtgagaagg cgatcaatga agccggggcg
     1381 ctgccgacgt ggacttacga ctcgaccttg gttttcccgg ccgaccgctc gctcacgcgc
     1441 ccggaggatg gcatttcgct ccccgatggc cgcctcatcg taagcgatca gatccacggg
     1501 ctgcgccaga tcgagatcga tggcaccagc aggccgttcg ggaatctcgc cgcggccgga
     1561 tacagtcacc atccgcccgc gcataacggt ggcgccaacg ggatgagcct cgaacccggt
     1621 ggtacccacc tgcttctcgc cgacg
//
LOCUS       DASWKS010000414         1939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_588481, whole genome shotgun sequence.
ACCESSION   DASWKS010000414 DASWKS010000000
VERSION     DASWKS010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588481"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="VGA78_11790"
     CDS             complement(<1..771)
                     /locus_tag="VGA78_11790"
                     /inference="COORDINATES: protein motif:HMM:NF016993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HEX9894600.1"
                     /translation="MRKIHNWDDWIDYFYHWQDSIGLDRKELKEFTFDVKFGPPEVGE
                     VEFGHYRGQRKWPTVMHIPDQRIRDALMNLVVYQGDTEFASVEQQRNLLQFPPSSYDL
                     LSITRVMCEEMRHGWQMSYLLCEHFGDEGRREAQKLLERRADEGQRLLGSFNEIVNNW
                     LDFFTYTQFVDRDGKFQLKMLSVSAFDPLSRSMGPMLKEESYHLGTGNSGLLRIVKAG
                     RVPPEMVQKFFNKWVPTAFDLFGTDNSSSAQWAYVWGLK"
     gene            complement(781..1575)
                     /locus_tag="VGA78_11795"
     CDS             complement(781..1575)
                     /locus_tag="VGA78_11795"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9894601.1"
                     /translation="MSRYEHLLVTRADGVGTVTINRPDKLNAFAGRMRQDMGDALREL
                     VSDDQVRVIVITGAGRAFCAGADISYMKQLLETKDWENAADLVEAGRTVVTTIRETSK
                     PVIASVNGPAAGGGANLALACDLRIASDQASIGQTFNRIGLAPDWGGTYFLPRLVGPS
                     KALELFFSADMVDAREAHRIGLFNQVVPHHQLEAETRALAQGLAAKAPLALALAKQAV
                     YRSGDRSLGEMLDFELEAQMQCFQSGDAWEGLQAFLDKRRPTFHGT"
     gene            complement(1572..>1939)
                     /locus_tag="VGA78_11800"
     CDS             complement(1572..>1939)
                     /locus_tag="VGA78_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894602.1"
                     /translation="SARIVSSAVAGVDPSCMGLGPVPATRKALARAGLTVADLDLIEL
                     NEAFAAQAIACIRDLELDPAKVNLYGGAIALGHPLGASGARILTTLVHALRRTGGRYG
                     LATMCIGVGQGIAMIVERV"
BASE COUNT          312 a          665 c          618 g          344 t
ORIGIN      
        1 cttgagcccc cacacatacg cccactgcgc cgacgacgag ttgtcggtgc cgaacagatc
       61 gaacgccgtg ggcacccact tgttgaagaa cttttgaacc atctcgggtg gcacccgccc
      121 cgccttcacg atgcggagca acccgctgtt cccggtgccc agatggtagc tctcttcctt
      181 gagcatgggg cccatggagc gggacagggg atcgaacgcc gacaccgaga gcatcttgag
      241 ctggaacttg ccgtcccggt ccacgaactg ggtgtaggtg aagaagtcca accagttatt
      301 cacaatctca ttgaagctgc ccaggagccg ctggccctcg tcggcccggc gctccagcag
      361 tttctgcgcc tcccgccgcc cttcgtcgcc gaagtgctcg cacaggagat acgacatctg
      421 ccagccgtgg cgcatctcct cgcacatgac ccgcgtgatg gacagcaggt cgtaggagct
      481 gggcgggaac tggagcagat tacgttgctg ctccaccgac gcgaactcgg tgtcaccctg
      541 gtagaccacc aggttcatta acgcgtcccg gatgcgctgg tcgggaatgt gcatgacggt
      601 gggccatttt cgctggcccc tgtaatggcc gaactccact tcgcccacct cgggcggtcc
      661 gaacttcaca tcgaacgtga actccttcag ctctttgcgg tccagcccga tggaatcctg
      721 ccagtgatag aagtagtcaa tccagtcatc ccagttgtgg atctttcgca tgcgtgcctc
      781 tcacgtcccg tgaaacgtgg gtcgtcgctt gtccaggaat gcctggagtc cctcccaggc
      841 gtcgccactt tggaagcatt gcatctgggc ctcgagttcg aagtcgagca tctcgcccag
      901 gctccggtcc ccgctccggt acaccgcctg cttggccagc gcgagtgcca gcggggcttt
      961 ggccgccagg ccctgcgcca gcgcgcgcgt ctcggcctcc agctggtggt gcgggaccac
     1021 ctggttgaac aggccgatcc ggtgcgcttc ccgggcgtcc accatgtccg cgctgaagaa
     1081 cagctccagc gccttggagg gacccaccag gcgcggcagg aagtaggtgc cgccccaatc
     1141 aggcgccagc ccgatccggt tgaaggtctg cccgatggac gcctggtccg aggcgatccg
     1201 gagatcgcac gccagcgcca ggttggcgcc gccgccggcg gcaggcccgt tgacgctcgc
     1261 gatgaccggc ttcgacgtct cgcggattgt ggtcacgacg gtgcggcccg cctcgaccag
     1321 atcggcggcg ttttcccagt ctttggtttc cagcagctgc ttcatgtagc tgatgtcggc
     1381 gccggcgcag aaggcccgcc ccgcgcccgt gatcacgatc acccgcacct ggtcgtcgct
     1441 caccagctcg cgcagcgcgt cccccatgtc ctggcgcatc cgccccgcga acgcgttgag
     1501 cttgtcgggg cggttgatgg tgaccgttcc cacgccgtcc gcgcgggtca ccagcaggtg
     1561 ctcgtagcgg ctcacacgcg ctccacgatc atggcaatgc cctgacccac gccgatgcac
     1621 atggtggcga gtccgtagcg gccgccggtg cgcctcaggg cgtggaccag cgtggtcagg
     1681 atgcgggcgc cgctggctcc cagcgggtga cccagcgcga tagccccgcc gtagaggttg
     1741 accttcgcgg gatccagctc caggtcgcgg atacacgcga tggcctgggc ggcgaacgcc
     1801 tcgttcagct cgatgagatc caggtccgcg accgtgaggc cggcgcgggc cagcgccttg
     1861 cgggtggcgg ggacgggccc gagtcccatg cagctcggat ctacgcccgc taccgcggag
     1921 gagacgatac gggcagacg
//
LOCUS       DASWKS010000415         2136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2453339, whole genome shotgun sequence.
ACCESSION   DASWKS010000415 DASWKS010000000
VERSION     DASWKS010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2453339"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VGA78_11805"
     CDS             complement(<1..292)
                     /locus_tag="VGA78_11805"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9894603.1"
                     /translation="MSNAAEVVVARLEQCGVDTVFGLPGTQNVELFEALRRSRIRTIV
                     PTHELAAGFMANGYARASGRVGVVAAIQGPGFGYALTALAEARHDSAPLLLLT"
     gene            complement(542..1606)
                     /locus_tag="VGA78_11810"
     CDS             complement(542..1606)
                     /locus_tag="VGA78_11810"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9894604.1"
                     /translation="MSAVAVRPVPVTQYALWNRLVAESPMGSPYSSPEYLDALCSGAG
                     GTFRILGLWRGEELIGGIGLYERVSAWGRYVWPRLLLYYNGPILRQFDTKYPSQRTSR
                     TVEALSALADTLAGEYASLMLKSRAALDDLRPFLARGWTVRAGYSYEVPLTDLEGQWG
                     RVEQNLRRLVERARQQGLQFSDDDDFAGFYTLHQMTLGRRGMASYLPREGFARWFERL
                     KSQGLCRLYSARLPDGRMAASQLVLTGQHPVSHTISAAADPALQNTGANPFLRWRAFE
                     VLAGAGYTGNDLTDAALNPVTHFKAQLGGKLCLTLVAECHPSWRWRAGTRVQQGYRGV
                     RRLAADLYHRVRDRSRPGLT"
     gene            complement(1603..>2136)
                     /locus_tag="VGA78_11815"
     CDS             complement(1603..>2136)
                     /locus_tag="VGA78_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894605.1"
                     /translation="GDIRALLVRRRLRMYPTDFGNSTLMITIRPDEATEAVRSVRTLV
                     EALGFHGVFSVELKQSEVDGRYYALEMNARPWWYVDFAARAGVDVIRLSWLDAQGEPV
                     PEIRDYQIGRRCVYPYYDWFAVQAQRRLHQAGLWDWLAAIPGAEQPVFRLSDPGPALQ
                     ALGQLLRRRWTSTKGSR"
BASE COUNT          360 a          721 c          714 g          341 t
ORIGIN      
        1 cggtgagcag caacaacgga gcggagtcgt gccgcgcctc cgccaaggcg gtaagcgcgt
       61 agccgaagcc gggaccctga atcgccgcga ctactccgac ccgcccgctg gcccgggcgt
      121 agccgttcgc catgaacccg gcggccagct cgtgggtcgg aacgatggtc cggatccggc
      181 tccgtcgcag ggcttcgaac agctcgacgt tctgggtgcc gggcagaccg aacaccgtgt
      241 cgacgccgca ctgctcgagc cgggccacca ccacctcggc agcattgctc attcgtgttc
      301 cagggggttg ggggtgccgc agcagcaccg tattgtagcc gcatcagcgc agtccgtgcg
      361 gctggatccc gtcgaggcgc tccgaagcga ataggattcg attccttgca agggttatcc
      421 gcagatgacg cggattacgc agagaacaaa cccatcggtt tgcttttcgt gctgtttgtt
      481 tttgctgttg ttatccgtgt aatccgcgta atctgcggat agctgttgcc gtgccccagg
      541 cctaggtaag gcccgggcgg gagcgatcgc gaacccggtg atacaggtca gcggccagcc
      601 gccgcacgcc gcggtatccc tgctgcaccc tggtaccggc gcgccagcgc caggagggat
      661 ggcattcagc caccaacgtc aggcagagct tgccgcccag ctgggccttg aaatgggtga
      721 ccgggttgag cgccgcatcg gtcaggtcgt tgccggtgta ccccgccccg gccagtacct
      781 cgaacgcccg ccagcggagg aagggattgg cgccggtgtt ctgcagggcg ggatcggcgg
      841 cggcagagat cgtgtggctg acggggtgct gcccggtgag gaccagctgc gaggcggcca
      901 tgcgcccgtc aggcaggcgc gcactgtaga gccggcagag gccctggctc ttgagccgct
      961 cgaaccagcg ggcgaagcct tcccggggga gatagctggc catcccgcgt cgccccagcg
     1021 tcatctggtg cagcgtgtag aagccggcga aatcgtcatc gtcggaaaac tgcagaccct
     1081 gctgccgggc ccgttccacc agccgccgga gattctgctc cactcgcccc cactgcccct
     1141 cgagatccgt cagaggaacc tcgtaactgt agccggcccg caccgtccat ccgcgcgcca
     1201 ggaacggccg cagatcgtcc agtgcggctc ggctcttcag catgagactg gcgtactcgc
     1261 ccgccagcgt gtcggccaag gcgctgagcg cttcgacggt tcgggaggtc cgctgcgaag
     1321 ggtatttggt gtcgaactgc cggaggatcg gaccgttgta gtagaggagc agtctgggcc
     1381 acacgtaccg gccccaggcc gagacgcgtt cgtagagacc gatgccgccg atcagctcct
     1441 cgccccgcca caggcccagg atacggaagg tgccgccggc cccgctgcac aacgcgtcaa
     1501 gatactcggg ggagctgtag ggactcccca tgggagactc cgccaccagc cggttccaga
     1561 gggcgtactg ggtgaccggt accgggcgga ccgccaccgc gctcatcgac tgcctttcgt
     1621 tgaagtccag cggcgccgca gcagctgccc gagcgcctgg agcgcgggtc cggggtcgct
     1681 caggcggaac acgggctgct cggcgcccgg aatcgccgcc agccaatccc agagaccggc
     1741 ctggtggagt cgtcgctggg cctggaccgc gaaccaatcg tagtaggggt agacgcagcg
     1801 ccggccgatc tgatagtccc ggatctccgg caccggctct ccctgggcgt cgagccagga
     1861 caggcggatc acgtccaccc cggcccgcgc cgcgaaatcg acataccacc agggccgggc
     1921 attcatctcg agggcataat agcgaccgtc gacttcgctc tgcttgagct ccacgctgaa
     1981 cacgccgtgg aatcccaggg cttccaccag ggtccgcact gaccgcaccg cctccgtcgc
     2041 ttcatcgggc cggatggtga tcatcagggt gctgtttcca aaatcggtgg gatacatccg
     2101 cagccggcgc cggaccagca gcgcccggat gtcgcc
//
LOCUS       DASWKS010000416         2224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_953826, whole genome shotgun sequence.
ACCESSION   DASWKS010000416 DASWKS010000000
VERSION     DASWKS010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953826"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..1074
                     /locus_tag="VGA78_11820"
     CDS             82..1074
                     /locus_tag="VGA78_11820"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX9894606.1"
                     /translation="MLLAAGLANAAIGAVAIPLDMVARMVLARLPLMRIESNWPATFA
                     TILYEIRLPNLVLTALTGLALGGSGAAFQALFRNPLADPYVIGIASGAGLGAVLAMAL
                     RWPADGLGMAAVPVAGFLGALLTVALVYRLSSVGKTTPVTTLILAGVAVSSFATALTS
                     LILLLSTSELHRAVTWMVGGFSLGGWAPVIVSLPYLAVALGVLVTLGRPLDVLQFGDE
                     QATQLGLDVDRLKLVVVVTASLAAATAVSFSGIIAFVGLVVPHLTRLLWGPSYRRLLP
                     LAALGGASFLLLADILARSLLSPRELPVGVLTSVIGAPFFLYLLARTKRNLGIW"
     gene            1071..1841
                     /locus_tag="VGA78_11825"
     CDS             1071..1841
                     /locus_tag="VGA78_11825"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9894607.1"
                     /translation="MIEIKQLSVGYPGLTVLRELDLRVEPGEVLAVVGPNGVGKSTLV
                     RAASGALRPLAGSVEIGGVRLHELPPAQRARMVSVVPQASNLPPALTALEVVILGRTP
                     YLGWLGSEGEQDHRLAAEAMARTETQALAHRRVGELSGGEQQRLLIARALAQGAPVML
                     LDEPTAHLDLRHQDRVLKLVRRLTREQGLSVLLALHDLNLVARFADRVALLSDGRVRK
                     IGQPHEVLTPEELAAVYGIQIHVMTNPFDGKPLVLAGD"
     gene            1920..>2224
                     /locus_tag="VGA78_11830"
     CDS             1920..>2224
                     /locus_tag="VGA78_11830"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX9894608.1"
                     /translation="MPNLEQARAWYPDQDPVHGFDHVERVLALAQNLGAELGADLEIL
                     QAAALLHDAAGAAPLSKGRAAHEHASAEFARVVLEQEGWPSQRIEPVLHCIRAHRYRG
                     "
BASE COUNT          324 a          709 c          773 g          418 t
ORIGIN      
        1 cgaggcaatg gcccgtttca tccatcccga gctcttcgat tgagactccg tcggtactca
       61 ccttggatct ggacggccgg ggtgctgctc gcggccggtc tggccaacgc cgccatcgga
      121 gcggtcgcca ttccgcttga tatggtggcg cgaatggtgc tggcccgcct gccgctgatg
      181 agaatcgaga gcaactggcc ggccaccttc gccaccatcc tgtatgagat ccggttaccc
      241 aacctggttc tgaccgcact gaccggcctg gcgctcggcg gcagcggtgc ggcgttccag
      301 gccctcttcc gcaatccgct ggccgaccct tacgtcattg gaatcgcatc aggagccggg
      361 ctgggggcgg tgctggcgat ggcgctgcgc tggccggccg acggactggg gatggcggcg
      421 gtaccggtgg ccggctttct cggagcgctg ctcaccgttg ctctggtcta ccgattgtcg
      481 agcgtgggaa aaacgacccc ggtgaccacc ctcatcctgg ccggggtggc agtgagctca
      541 ttcgccaccg cactgaccag cctgattctg ctgctatcga cctccgagct gcatcgggcg
      601 gtaacctgga tggtcggggg cttctccctc ggaggctggg ccccagtgat tgtctcgctg
      661 ccatacctgg cggttgcgct cggggtgttg gtgaccctcg gccggccgct ggacgtgctg
      721 cagtttggcg atgagcaagc cacccaactc gggttggacg tcgaccgcct gaaactggtg
      781 gtggtggtca ctgcttcgct ggcggccgcc accgcggtgt cgttctcggg gatcatcgcg
      841 tttgtgggac tggtggtgcc ccatctgact cggctgctgt ggggaccgag ctatcggcgg
      901 ctgcttcccc ttgcggcgct cggcggggca agctttctcc tgctggccga catcctggcc
      961 cgctcgctcc tgtcgccccg cgaacttccg gtcggagtgt tgacctcggt gatcggggcg
     1021 ccgttcttcc tgtacctgct ggcccgcacc aaacggaatc tggggatctg gtgatcgaga
     1081 tcaagcagtt gagtgtgggt tatccggggc tgaccgtatt gcgcgagctc gacctacgag
     1141 tggaacccgg cgaggtgctg gcggtggtgg gacccaacgg ggtcggcaaa tccactctgg
     1201 tccgggcagc cagcggggcg ctccggccgc tggctggctc ggtggagatt ggcggcgtac
     1261 gactacatga gctgccacca gcccaacggg ctcgaatggt ctcggtcgtg ccgcaggcca
     1321 gcaacctgcc tccggctctt actgccctgg aggtcgtgat cctagggcgc acgccgtatc
     1381 tcgggtggct gggatcggaa ggtgagcagg atcaccggct ggcggctgaa gccatggccc
     1441 gcaccgagac ccaagccctg gcccatcggc gagtgggaga gctctccggt ggggagcagc
     1501 agcgcctgct gatcgcccgg gccctcgccc agggcgcgcc ggtcatgctg ctcgacgagc
     1561 ccactgccca tctcgatctg cgccatcagg accgggtgct gaagctggtg cgccggctga
     1621 cccgcgaaca ggggttgtcg gtcctgctcg cgctccacga tctaaacctg gtggcgcgtt
     1681 tcgccgatcg agtggcgttg ctctccgacg ggcgggtccg caagatcggc caaccgcacg
     1741 aggtgctcac tccagaggag ctggcggcgg tctacggaat tcagatccat gtgatgacta
     1801 accccttcga cgggaagccg ctggtgctcg ccggcgacta gcacaagctc gatcccgaac
     1861 ggggtatgct ctgggcagtc tggtcgaggt gtcggccgga ggattcggag gggaatcgtt
     1921 tgccaaacct cgagcaagcc cgagcctggt atccggatca ggatccggta cacgggttcg
     1981 accacgtcga acgggtgctg gcactcgccc agaacctagg cgccgaattg ggagccgatc
     2041 tggagatcct gcaggccgcg gctctgctgc acgacgcggc gggagctgcg ccgctcagta
     2101 agggccgggc tgctcacgag cacgcctcgg ccgagtttgc ccgagtggtg ctggagcagg
     2161 aagggtggcc ctcgcagagg atcgagccgg tattgcactg catccgggcc caccgttacc
     2221 gcgg
//
LOCUS       DASWKS010000417        16308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2808248, whole genome shotgun sequence.
ACCESSION   DASWKS010000417 DASWKS010000000
VERSION     DASWKS010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16308
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2808248"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2314
                     /locus_tag="VGA78_11835"
     CDS             <1..2314
                     /locus_tag="VGA78_11835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894609.1"
                     /translation="VEADTMPNPKPTAGAKAQVRPSGLYKSVDGGATWTKMQPQNVRP
                     FYYSQVRVDPKNPDRVFWSSTPVNFSLDGGKTARTATQGLHVDHHAMWIDPNDPSFMV
                     VGNDGGIGISFDGGGNYIFTNSFAIGQFYNVSYDMAVPYNVCGGLQDNGSWCGPSRRR
                     GSISNMHWVNVSGGDGFVTAQDPTDPNIIYSESQGGNIGRLDFRTGNRVGFQKPTWRT
                     AWLRWQDSIIVVRGDSTTPETREQRTRIAEFRRRATQDSIDLSLRWNWNTPFFISPHN
                     PRVIYMGANRVMKSVKQGDEMYPISSDLSTRDTMRIRVSTRTTGGVTPDVTGAETHST
                     IVSLNESPVRPGLLFAGTDDGRLWLTRNDGGAWEDLTGRAPGVPAGTYVSRIEPSRHD
                     SSTFFVTFDNHRNGDFTPYVYISNDFGRSFRSIVNNLPKGGVDFVHVIREDPVNRNLL
                     FVGTDVGAYVSTDRGVSWARFMTDLPTVPVHDLQIHSRDREMIAATHGRSIWVVDIAP
                     LQELTSDILAAQVHVFGPKTAFRFNQMPDGLVGGGGFGYGHMTFISNPPPLGAEIVYR
                     VAAGTPIGRANIVIQDVAGDTVQVLNASGSPGWQRVYWNFTMRRPPRAALSPAGKRDS
                     TALAKRIDRIIDSLVAAGSERARFDSARSQLLSGSFGGFGGGGGGGGAPQQPGLPPFR
                     PRPGEGGVVGQAGGGGGGAAGTPLGQIAQGLGGFQALQQLGLGGGGPVPQAAPGDYAV
                     TITVAGKTIRQKIKVVNLRPAGGLPVAEPE"
     gene            complement(2408..3031)
                     /locus_tag="VGA78_11840"
     CDS             complement(2408..3031)
                     /locus_tag="VGA78_11840"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX9894610.1"
                     /translation="MSRAIRLALVSLVMLALVNESALAQRRGIVDVSPGHFRRGFWLE
                     GGIGWGEESYKLAPDGYTETLGKPTLSLGLGGTVNPHLRLGGEVTAWWNQTQLDDGTD
                     ITDVTEYLTEILAVARFYPGRDLGLYLKGGAGLGISGTDGEFVEGVSETGFATVLGLG
                     YEIKVSRSVFITPTVNYYFNRFEKRNEPTLYERLWNVGVGVTWQLGR"
     gene            3180..3896
                     /locus_tag="VGA78_11845"
     CDS             3180..3896
                     /locus_tag="VGA78_11845"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEX9894611.1"
                     /translation="MNSEGRRFALFGLSLVVAAVCAGLGVWQGRRLAARRALNRTTSA
                     ARALPEVNLNQLDANQQLSQRRIVARGRFDHDHSFVLRGRVEREAPGVQLVVPLRLEG
                     RPEAVLVNRGFAPAPDAARPDTARLDRTVDLQVRGLALPVPVGPDSGAPVNYGGSTSW
                     RRLDLAAIQARLPYPVLDVYLHETEAESRGEGASRWPAPATLPPLDDGPHLSYMLQWF
                     GIGVAAVGFGILVLRSKGSK"
     gene            complement(3965..4360)
                     /locus_tag="VGA78_11850"
     CDS             complement(3965..4360)
                     /locus_tag="VGA78_11850"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEX9894612.1"
                     /translation="MSALPVLPCFPCPHASACCRYGTTVTDEEGAAIRQHHGENLVYQ
                     TRWGEWRTRIRQGYCVFHAANRCALHDKPYYPAVCRGFPFTDAETGGPYLYDQTICPE
                     FIGRRQSKGSNQVEGVEPVEDGRRSCNPG"
     gene            complement(4357..5931)
                     /locus_tag="VGA78_11855"
     CDS             complement(4357..5931)
                     /locus_tag="VGA78_11855"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX9894613.1"
                     /translation="MRLSLVFLLAACAPAPAAGQAVAPQAARPALVVFITVDQMRPDY
                     FERWPAQLTAGFKRLYDGSAFYARGEQDHAITETAPGHSTILTGRSPASTGIVTNELG
                     VPDTAAPLVRVPGPGASPRRFRGTTMYDWMKAADPQIRVLSVSGKDRGAVLPIGRAKV
                     PVFWYRFGIFTTSRWYADTLPAWLERWNERQGAAKLAGKQWDLLLDATSYAEPDSQVW
                     ERGGQGFMFPKRFSTDSQRVTFELMPTPYMDSLNLDVALEGVKALQLGKRPGRTDLLS
                     ISLSATDYIGHTYGPDSREIHDHIIRVDRFLGWFIDSLAKVVPLERTLYVLTADHGVT
                     SFPEFNRSRGRMSGRANADTLTALADQALQQRHGKSFGLDFNNGLLYGDVAALKAAKV
                     NVDSLSSALASSVARITGVTRIYTPRSLAAADTADVDAMRWRRSIPADFPWLAAASLA
                     PGYIWSFSPSATTHGTTNADDLRVPILFMGPGITPGKYQRARTVDIAPTLAAILGVKP
                     GEPVEGRVLPEVVKPR"
     gene            5968..6648
                     /locus_tag="VGA78_11860"
     CDS             5968..6648
                     /locus_tag="VGA78_11860"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX9894614.1"
                     /translation="MKWGSRSPPFRVWILALTALAGCRTGADRAEALGQPAEAGLPAT
                     VARNRIRGVVRQPALPKPEIRMTTANGRPFDLRRDTEGYLTLVFFGYTHCPDVCPVHV
                     ANLSKVLNTLPIEVVNQVRFVFVTTDPERDTPARLKEWLAAFHPAFIGLTGTPEQIKA
                     AQLSMGLMPAAREVPDSANPAAYLVSHAAAVFAFTSDDSAHVLYPFGIRQQDWANDLP
                     ILVHGWPK"
     gene            6693..7157
                     /locus_tag="VGA78_11865"
     CDS             6693..7157
                     /locus_tag="VGA78_11865"
                     /inference="COORDINATES: protein motif:HMM:NF016221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEX9894615.1"
                     /translation="MLLVGAVASACEREAYVGRSITAAAADTLRVSGGFSYATPGSEE
                     TALYFTVHNPTGKPDTLVRVITPDSAAVTYHRSVTDGGLVRMEPLGLLSVPADDSLVL
                     APGGIHLMLLSAKRRSPGDTIHLSLAFARAGTRALAIPVLAPGEPPAAHDHE"
     gene            7162..7980
                     /locus_tag="VGA78_11870"
     CDS             7162..7980
                     /locus_tag="VGA78_11870"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX9894616.1"
                     /translation="MQWWCAATSTDWSWTWRPYPGVWLMIGLVAALYWRGIRRAGAVP
                     VSRPLLFGAGLLVLWLALDWPVGALGAGYLLSVHTAQYVALTLIAMPLLLAGTPPALF
                     PIRGSGRAAAALQRLANPAVGLVGYSVVMAVTHVPRVTDLLMSTQLGSFGIDLAWLGG
                     ALALWWPVLAPEEYVRISPPLRIGYLFVASIPPTIPAAFMVFADYPLYALYELAPRVG
                     LAAGTDQQAAGLIMKAGADPLLWLAMAIVFFRWQRAEDDGERRDQSLSPQEQLT"
     gene            7986..8357
                     /locus_tag="VGA78_11875"
     CDS             7986..8357
                     /locus_tag="VGA78_11875"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance CopC family protein"
                     /protein_id="HEX9894617.1"
                     /translation="MKPLRPPVIALALLLGISGPAAAMFHIHLDKSAPAKNQELTEPP
                     KEVRLWFSEKPEVRLSTITLQGADSAKVVLSKPSPTDDAHSVVSKVTGAMGPGTYLVK
                     WKTAGKDGHAIRGSYTFSIAK"
     gene            8357..9259
                     /locus_tag="VGA78_11880"
     CDS             8357..9259
                     /locus_tag="VGA78_11880"
                     /inference="COORDINATES: protein motif:HMM:NF017262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX9894618.1"
                     /translation="MDAAPRWLAYGAMLLVIGASVFRFGILAPLARGGEPVPPATSRR
                     AATLGAVAAVALILLAGLRLLMQARSFSEPGESITLELLGTVIGTGWGRGWVAQVLAA
                     GLAAAGAFFARVAPAGWLSAAAGASAVVLAAPLTGHASGAERAGSWGYPLDALHVLGA
                     GAWIGTLMVLLLTGLIPSRTEPAEARGRTVARLTHAFHPVALVGASVTVLAGTLLSWR
                     FLEGSLSGLWTSGWGRTLLLKLVLLSGVAGFGAWNWRVVRPTLGSAEAARKLTRSALF
                     ELAIATALLAATAVLVARPLPGED"
     gene            9261..9923
                     /locus_tag="VGA78_11885"
     CDS             9261..9923
                     /locus_tag="VGA78_11885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894619.1"
                     /translation="MRTRWIACLLLFTGVAPVSAQGLGVSGVASTLGLGAELSYRTGS
                     LGFRGGYMLFNYSRNDQLVEGVRYDLKPKLRNAQLGLDVYPLGKVFRLSGGLAYAVSR
                     AEGLGVLDQPIVVGGQSYQPSEVGELVGELRYDRKWMPWVGLGVASGGRVAVTFDVGV
                     MFAGHPTVQLSASGGSLTGPERVVLDQNVAMEELELQQAIDDEKWAKYYPIVSLGLRF
                     RL"
     gene            complement(10005..11801)
                     /locus_tag="VGA78_11890"
     CDS             complement(10005..11801)
                     /locus_tag="VGA78_11890"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894620.1"
                     /translation="MMESEILLRYRSELDRLGRNDAEASRRFNLLAAARGGSFLAAIA
                     LLWLGAIRGSPPLQWALLPLAAYVGFMIVHEIVVRRRDRIRRAVAWYERGVARLEDRW
                     AGGGNGGEPFRSDDHLFADDLDLFGPGSLFELLCTAETSAGRETLADWIKAPALPGEV
                     TRRQQAIAELRSREGLRLDVAVIGSQVGKGMERDVLARWGTAQPLDLPAWAAPAALGI
                     ALGNVVALAGAIWYGWSPWVPTGTILAGVVLAGLLRERVRGIVAAVERPLRDLDHMAS
                     LIARLEQESWTAPLLAEIAGRLRGSHQPASGALAGLDRRVGLLDSRRNQLFAPFGALL
                     LWTTQLALSIERWRRRHGVRVGQWVTALGELEALASLATYSAEHPGDAEPELAEGSEA
                     VLEAEALVHPLLPRGRAVPNDLTLGGGRPRALVVSGSNMSGKSTLLRAVGVNVVLAQA
                     GAPVSARRFRLSSLRIGASFRPQDSLQQGQSRFYAEIGRLRRTVDLLQGERPVLFLLD
                     ELLSGTNSYDRALGARAIVEHLVRRGAIGLVTTHDLALAEIAEALAPDMANVHFEDTL
                     EDGTLRFDYRLRPGVVRRSNAVELMRAVGLPV"
     gene            complement(11798..12463)
                     /locus_tag="VGA78_11895"
     CDS             complement(11798..12463)
                     /locus_tag="VGA78_11895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894621.1"
                     /translation="MRVPRRLGPGRPRGPLPDIQHPLTRQIRDLIDQAHLGNLREAAL
                     HTGLPYATLRDLYAGHTASPGLRTLQVIAQAYALPLEWFTGEETVPPRLEIAGELPPD
                     PEYGRGRRGRRLRIPLAAWPLAHCFLQLERELSAQPPHRSRPIFGAVSDADECRQLLT
                     AFLFGPLLEAQSEGLLLVLGAEPPFPGAAARPTAEQERDWVAVLRDLGRFWERTLSAS
                     LLR"
     gene            complement(12508..13014)
                     /locus_tag="VGA78_11900"
     CDS             complement(12508..13014)
                     /locus_tag="VGA78_11900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894622.1"
                     /translation="MRALTPVLSTLAALSLLAAAPDVAQAGPPWISIELPANPYDAST
                     RGAYLLVHAFHHGTPIGFPVSGRAEGIVNGERKSVTLKFERTERPGVYAMKNQWGDVG
                     EWTLMITVSQGKDDGATALVQISEGQVFSVAVPTEKRGEWTVPRAVTLADVEATLRDR
                     PTRVAVRR"
     gene            complement(13080..13937)
                     /locus_tag="VGA78_11905"
     CDS             complement(13080..13937)
                     /locus_tag="VGA78_11905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894623.1"
                     /translation="MLRCVVIALLLPGALAAQEKVNRGWSIDADASIRIHLAAGRLRI
                     TGWAHDSVAVTGGIPAGGGSFYGGGRAKGSKLGVETKDWSGSGPASTLEVSLPRAARL
                     WVKTASASVEITGVEGEIDLTSVNGTLTVNGAPRVLTAETIDGSVIAEGGKGVQRLRT
                     GGGSIVVRAGGGDITAATVGGSIDVAAERLERGRLETVTGPLSFSGNVALGGALEAET
                     HSADITLRFVGPVDAELLLATIGGVIYNKLVPKGSAIKGGKPLSFMMGTGGAQVSARS
                     FKGAITVSR"
     gene            complement(13937..14536)
                     /locus_tag="VGA78_11910"
     CDS             complement(13937..14536)
                     /locus_tag="VGA78_11910"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9894624.1"
                     /translation="MTCESVRDLLDQYVAGAVDAEVAVAIRGHLMSCQECGADEAAAR
                     FLAPRVAALPRAVAPSRPLWTGIESRLKPRSRGLALRWLPLAAAIGLIVGAGWWSQRG
                     AGRDQQLPTPEWDQSRTVVYQMAASELEASLLGEGRIAAAAAPAVRRDVQTLDAAIEE
                     TSSALQADPGNEVLRQLHLSALRRKLDVLRRVAALHVES"
     gene            complement(14533..15120)
                     /locus_tag="VGA78_11915"
     CDS             complement(14533..15120)
                     /locus_tag="VGA78_11915"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894625.1"
                     /translation="MITRALSLATMTGAVPADPPTPVPAELARIRAAQAGDAGAFRLV
                     YDAHVGRVHALCLRLTGEPGWAEELTQDVFVRVWERLASFRGDSAFATWLYRLAMNEV
                     LMALRTTRRRELKVEPRHEPPEAQAGAAREAEAAIDLERAIAGLPEGCRNVFVLHDVE
                     GLRHEEIARLTGTAVGTSKAHLFRARRLLREVLDR"
     gene            complement(15169..16182)
                     /gene="galE"
                     /locus_tag="VGA78_11920"
     CDS             complement(15169..16182)
                     /gene="galE"
                     /locus_tag="VGA78_11920"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEX9894626.1"
                     /translation="MRILVTGGAGYIGSHTAVVLLEAGHDLVVVDNLSNSKYEAVHRV
                     EQLTGREVEFHQVDLLDQPGLDAAFAGGIDAVIHFAGLKAVGESVSQPRRYYHNNVSG
                     TLVLCDVMERHGVKSMVFSSSATVYGDPHTVPITEDFPLQATNPYGRSKLMIEDILRD
                     LHRADPEWRVGILRYFNPAGSHPSGRIGEDPNGIPNNLLPYISQVAIGRLPELPVHGS
                     DYPTPDGTGVRDYIHVMDLAQGHERALAKLQRSAGVFTYNLGTGRGYSVLEMVAAFER
                     ASGREVPYRIGPRRNGDVAACYADPSRARVELGWTAVRDLDAMCADTWRWQVGNPAGY
                     GSD"
BASE COUNT         2635 a         5511 c         5522 g         2640 t
ORIGIN      
        1 ggttgaagcc gacacgatgc ccaaccccaa gcccacggcg ggggccaagg ctcaggtgcg
       61 gccgagcggg ctctacaagt cggtggacgg tggcgccacc tggaccaaga tgcagcccca
      121 gaatgtgcgg ccgttctact actcccaggt gcgggtcgat cccaagaacc ccgaccgggt
      181 gttctggtcg tccaccccgg tcaacttctc gctggacggc ggcaagaccg cccgcacggc
      241 cacccagggt ctgcacgtgg accaccacgc catgtggatc gatcccaacg atcccagctt
      301 catggtggtg ggcaatgacg gcggcatcgg gatcagcttc gacggtggtg gcaactacat
      361 cttcaccaat tcgttcgcca tcggacagtt ctataacgtc agctacgaca tggcggtgcc
      421 gtacaacgta tgcggcggcc tgcaggacaa cggctcctgg tgcggaccca gccggcggcg
      481 cgggtcgatc agcaacatgc actgggtgaa cgtgagcggc ggcgatgggt tcgtcaccgc
      541 gcaggacccg accgacccca acatcatcta cagcgaatca cagggcggca acatcggccg
      601 gctcgacttc cgcaccggca accgggtcgg gttccagaag cccacctggc gcaccgcctg
      661 gctccggtgg caggactcga tcatcgtcgt ccggggcgac agcaccacgc cggagacccg
      721 ggagcagcgg acccggatcg ccgagttccg ccgccgcgcc acccaggact cgatcgactt
      781 gagcctaagg tggaactgga acacgccgtt cttcatctcg ccccacaacc cgcgggtgat
      841 ctatatgggg gccaaccggg tgatgaagtc ggtgaagcag ggcgacgaga tgtatccgat
      901 ctcgtccgac ctctcgaccc gagacaccat gaggatccgg gtcagcaccc ggacgaccgg
      961 cggggtcacg ccggacgtga ccggcgccga gacccattcg accatcgtat cgctcaacga
     1021 gtcacccgtt cggcccggcc tgctcttcgc gggcaccgac gacggcaggc tgtggctgac
     1081 ccggaacgat ggcggtgcct gggaggatct caccgggcgg gctccgggag ttccggccgg
     1141 cacctacgtg agccggatcg agccgtcgcg gcacgattcg tccaccttct ttgtcacgtt
     1201 cgacaatcac cgcaacgggg atttcacgcc ctacgtgtac atcagcaacg acttcggcag
     1261 gagcttccgc tccatcgtga acaacctgcc caagggcggc gtcgatttcg tgcacgtcat
     1321 ccgcgaggac ccggtcaatc ggaacctgct cttcgtcggc accgacgtcg gagcctacgt
     1381 ctccaccgac cggggcgtgt cgtgggccag gttcatgacc gacctgccca ccgtgccggt
     1441 ccacgatctc cagatccatt cgcgcgaccg cgaaatgatt gccgccaccc acggacggtc
     1501 gatctgggtg gtggacatcg caccgctgca ggagttgacc agcgacatcc tcgcggctca
     1561 ggtgcacgtt tttggcccca agaccgcctt ccggttcaat cagatgcctg acgggctagt
     1621 gggcggcggc ggcttcgggt acgggcacat gaccttcatc tccaatcctc cgcccctcgg
     1681 cgcggagatc gtctatcgag tggcggccgg gaccccaatc ggccgggcca acatcgtgat
     1741 ccaggatgtg gccggtgaca cggtgcaggt tctgaacgct tccggctcgc ccggatggca
     1801 gcgggtctat tggaacttca ccatgcgccg gccgccccgg gcggcgctgt cgccggccgg
     1861 caagcgcgac agcaccgcgc tggccaagcg catcgaccga atcatcgact cgctggtggc
     1921 ggccggatcg gaacgggccc ggttcgactc ggcccggtcc cagctcctga gcggcagttt
     1981 cggcggcttt ggcggtggcg gcggcggcgg cggtgcgccc cagcagccgg gcctgccccc
     2041 atttcggcct cgccccggtg aaggcggcgt ggtgggtcag gccggcggcg gaggcggggg
     2101 ggccgccggc acgccgctgg ggcagatcgc acagggtctg ggcggctttc aggcgctgca
     2161 gcaactgggt ctgggtgggg gcgggccggt cccgcaggcg gcgccgggtg attacgcggt
     2221 gacgatcacg gtggcgggga agaccatccg gcagaagatc aaagtggtga acctgcggcc
     2281 ggccggcggc ttgccggtgg ctgagccgga gtagttgcga gcctgctccg ctacaaccga
     2341 ggcgccgcga tccgggttgg gatcacggcg cctcggtgtt tcctgggcga gcccgacgac
     2401 tcgtgctcta tcggcccagc tgccaggtca cgccgacacc cacgttccac agccgctcat
     2461 acaacgtcgg ttcgttccgc ttctcgaaac gattgaagta gtagttgacc gtcggagtga
     2521 tgaagacgct tcgggacacc ttgatctcgt aaccgagacc cagcaccgtg gcgaacccgg
     2581 tttcggagac cccctcgaca aactcgccat cggttccgct gattcccagg cctgccccgc
     2641 ctttcaggta cagcccgaga tcccggcccg gatagaacct ggcgaccgcc aagatttcgg
     2701 tgagatactc ggtgacatcg gtgatatcgg ttccatcatc gagttgcgtc tggttccacc
     2761 aggccgtgac ctcgcctccc aaccgcaggt ggggattcac ggtcccgccc aatccgagac
     2821 tcaaggtcgg cttgccgagg gtttcggtgt agccatccgg ggccagcttg taggactctt
     2881 cgccccagcc aatgccaccc tcgagccaga agccgcgacg gaaatgaccg ggtgacacat
     2941 cgacgatacc gcggcgctgg gccagggccg attcattcac cagggccagc atgacgagtg
     3001 acacaagggc caggcgaatc gcgcgagaca ttgggaccgt tctccgtagt ggtcacgcac
     3061 cggtgggtgc aagtgtcggg ccttcgagga cccgcgcact atcttgttgt catggagaat
     3121 cttagcaacg cggttcccga caagcatcaa agccgggatg tccccaccga gagacaggca
     3181 tgaacagcga aggtcgccgg tttgcgctgt tcgggctgag cctggtggtg gccgcggtct
     3241 gcgccggtct gggggtctgg cagggccggc gcctggctgc ccggcgcgcc ctcaatcgca
     3301 ccacgtcggc ggcccgagcg ctgcccgaag tcaacctgaa ccagctggac gccaaccagc
     3361 agctctctca gaggcggatc gtggcgcggg gacgtttcga ccatgaccac agcttcgtgc
     3421 tgcgaggccg agtcgagcgc gaagcccccg gcgtgcagct ggtggtgccg ctccggctcg
     3481 agggacggcc cgaagcggtg ctggtgaatc gcgggtttgc ccccgcgccc gacgcggccc
     3541 gtcctgacac cgcccggctg gaccgcaccg tcgatctcca ggtgcgaggg ctggcgttgc
     3601 cggtaccggt gggccctgac agcggggccc cggtcaacta cggcggcagc acctcctggc
     3661 ggcggctgga tctcgccgcc attcaggctc ggctccccta cccggtgctc gacgtgtacc
     3721 tgcacgagac cgaggccgaa tcgcgcgggg agggagcctc gcgctggccg gcgccggcca
     3781 ccttgccgcc gctggatgat ggcccccacc tctcgtacat gctgcaatgg ttcggcatcg
     3841 gtgtggcggc ggtgggattt gggatcttgg tcttacggtc gaaggggtcg aaatagtcga
     3901 aggcggtcca aaagcagtcg aaggcggtcg aaggcagtcg aagcgggtcg aagggggtag
     3961 acgcctagcc agggttacag cttcttcgac cgtcttcgac cggttcgacc ccttcgactt
     4021 ggttcgaccc cttcgactgt cttcgaccga tgaattcagg gcagatcgtt tgatcgtaca
     4081 ggtatggccc gccggtctcg gcgtcggtga aggggaagcc gcggcagacc gccgggtagt
     4141 agggcttgtc gtgcagggca caccggttgg ccgcgtgaaa cacgcagtag ccctggcgga
     4201 tccgggtgcg ccattcgccc cagcgggtct gatataccag gttctccccg tggtgctggc
     4261 ggatggcggc cccttcttcg tcggtgaccg tggtcccgta gcggcagcag gctgaggcgt
     4321 ggggacaggg aaagcacggc agcaccggca gggcgctcac cgcggcttca ccacctcggg
     4381 tagcacccgg ccctcgaccg gctcgcccgg cttgaccccc agaatggccg cgagggtcgg
     4441 agcgatatcg acggtgcggg cccgctggta tttcccgggc gtgatgcctg gtcccatgaa
     4501 caggatcggg acccgcaggt catcagcgtt ggtggtgccg tgggtggtgg cgctgggact
     4561 gaagctccag atgtagcccg gcgccagact ggcggcggcg agccagggga aatcggccgg
     4621 gatgctccgg cgccaccgca tggcgtcgac atcggcggtg tcggccgcgg ccagcgaacg
     4681 cggagtgtaa atccgggtga cgccggtgat ccgcgccacg ctggatgcca gggcgctgga
     4741 caggctgtcg acattcactt tggcggcctt gagcgccgcc acatccccat acagcagacc
     4801 gttgttgaag tccaatccaa agctcttccc gtgccgttgc tgcaaggcct gatcggccag
     4861 cgcggtcagg gtatcggcgt tggcgcgccc gctcatccgg ccgcgcgagc gattgaactc
     4921 cgggaacgag gtcaccccgt gatcggcggt gagcacgtag agggtccgct ccagcggaac
     4981 caccttcgcc agcgaatcga tgaaccaccc caggaagcga tcgacccgaa tgatgtgatc
     5041 gtggatttcc cgcgaatcgg gcccgtaggt gtgtccgatg taatccgtcg ccgagagcga
     5101 gatcgagagc aggtcggtgc ggccgggccg tttgcccagc tggagcgctt tcacgccctc
     5161 gagcgccacg tcgaggttga gcgagtccat gtacggtgtc ggcatcagct cgaacgtgac
     5221 ccgctgcgaa tcggtgctga atcgcttggg aaacatgaaa ccctgaccgc cccgctccca
     5281 cacctgggaa tccggttccg cgtaggacgt ggcatccagc aggaggtccc actgtttgcc
     5341 cgcgagcttt gcggctccct gccgctcgtt ccagcgctcc agccacgcgg gcagcgtgtc
     5401 ggcgtaccag cggctggtgg tgaagatgcc gaagcggtac cagaacaccg gaaccttggc
     5461 tcgaccgatc gggagaacgg cgccgcggtc cttccctgag accgacagca cccgtatttg
     5521 tgggtcggcc gccttcatcc agtcgtacat ggtggtgccc cggaaccgcc ggggggacgc
     5581 acccggaccg gggaccctca ccagtggggc cgcggtatcc gggaccccca gctcgttggt
     5641 gacgatcccg gtgctggcgg gcgaccggcc ggtgagtatg gtcgagtggc ccggcgcggt
     5701 ttcggtgatg gcgtggtcct gctcgccccg ggcgtagaac gccgagccgt cataaagccg
     5761 cttgaagccg gcggtgagct gggctggcca acgctcgaag tagtcgggcc gcatctggtc
     5821 gaccgtgatg aacaccacca gggccggtcg cgcggcctga ggcgcgaccg cttgacccgc
     5881 ggccggcgcg ggagcacagg ccgcaagcag gaacaccagg gagagacgca tgggatggaa
     5941 ggtaacaacc cgctattttt cgcggctatg aaatggggtt cccggtcacc gccttttcgg
     6001 gtctggattc tggccctgac ggccctcgcc ggctgccgga ccggcgccga ccgggccgaa
     6061 gccctggggc aaccggccga ggcagggctc ccggctaccg tggcgcgaaa ccggatcagg
     6121 ggcgtagtgc gccagcccgc cctccccaag cccgagatcc ggatgaccac ggccaacggc
     6181 aggcctttcg acctgcggcg cgataccgag gggtatctca ccctggtgtt cttcggctat
     6241 acccattgtc ccgatgtgtg tccggtccac gtggccaacc tgtcgaaggt gctcaacacg
     6301 ctgccgatcg aggtggtcaa ccaagttcgc ttcgtattcg tcaccaccga cccggagcgg
     6361 gacacaccgg cgcggctcaa ggaatggctg gcggcattcc atcccgcctt catcgggctg
     6421 accggaaccc cggagcagat caaagcggcg caattgtcca tggggctgat gccggccgcg
     6481 cgggaggtac cggacagcgc caacccggcc gcgtacctgg tttcccacgc cgccgccgtc
     6541 ttcgcattca ccagcgacga ctcggctcac gtcctctacc cattcggcat ccggcagcag
     6601 gattgggcca atgacctgcc gatcctcgtc cacgggtggc ccaagtgaag ggagagtgcc
     6661 cattgcccag tgcccatgga agagggattt ggatgcttct ggttggggca gtggcgagtg
     6721 cctgcgagcg agaggcctac gtgggccgct ccatcaccgc cgccgccgcc gacaccttgc
     6781 gggtgagcgg agggttcagt tacgcgacgc cggggagcga ggagactgcg ctgtacttca
     6841 cggtgcacaa ccccaccggc aagcctgaca ccttggtacg ggtcatcacg cccgactcgg
     6901 ccgccgtcac ctaccaccgg tccgtcaccg acggcggcct ggtgcgcatg gaacccctcg
     6961 ggctactgtc ggtaccggcc gatgacagtc tggttctggc gccgggcggc atccacctga
     7021 tgctgttgag cgcgaagcgc cgcagcccgg gcgatacgat tcacctgagt ctcgcctttg
     7081 cccgggccgg tacccgcgcg ctggcgattc ccgttctggc gccgggtgaa ccccccgcgg
     7141 cgcacgatca cgagtagcgc gatgcagtgg tggtgtgcgg cgacgagcac cgattggagc
     7201 tggacctggc ggccctatcc cggggtctgg ctgatgatcg ggctggttgc cgcgctctac
     7261 tggaggggga ttcgtcgggc cggggcggtt ccggtcagcc gacccctgct cttcggggcc
     7321 ggcctgctgg tgctgtggct ggcgctcgac tggccggtcg gcgcgctcgg ggccggctac
     7381 ctgttgagcg tacacacggc tcaatacgtc gccctgactc tcatcgccat gcccctgctg
     7441 ctggctggaa ctccgccggc actcttcccg attcggggga gcggtcgagc ggcagcggcg
     7501 cttcaacgtc tcgccaaccc ggccgtagga ttggtagggt acagcgtggt gatggcggtg
     7561 acgcatgtcc cgcgggtgac cgatctgttg atgtccaccc agctgggcag cttcggcatc
     7621 gatctggcat ggctgggagg cgcattggcg ttgtggtggc ctgtgctggc gccggaggaa
     7681 tatgttcgga tttcgccgcc gctccggatc ggatatctct tcgtggcgag catccccccg
     7741 accattcccg ccgcgttcat ggtattcgcc gactacccgt tgtacgccct ctatgagctg
     7801 gcgccccggg tcggcctcgc ggcggggacg gatcagcagg ccgccggtct catcatgaag
     7861 gcgggcgccg atccgttgct gtggctggcg atggcgattg tgttcttccg ctggcagcgc
     7921 gccgaagatg acggggagcg gcgcgatcag tccctttcac cgcaggagca actgacttga
     7981 gtttcatgaa accccttcga ccgccggtga tcgccctggc ccttttgtta ggcatttccg
     8041 gacccgcggc ggccatgttc catattcacc tggacaagag cgcgccggcc aagaaccagg
     8101 aattgacgga gcctcccaag gaagtccggc tctggttcag cgagaagccg gaggtgcggc
     8161 tctcgaccat taccctgcag ggcgccgaca gcgccaaggt ggtactgagc aagcccagcc
     8221 ccaccgacga cgcccactcc gtcgtctcga aggtgaccgg tgcgatgggc cccgggacct
     8281 acctggtcaa gtggaagacc gcggggaagg acggtcacgc catccgcggc tcctacacgt
     8341 tctcgatcgc caaatagtgg acgccgcgcc ccgctggctg gcctacgggg ccatgctgct
     8401 ggtgatcggg gcgagcgtct tccggtttgg gattctcgct ccgctggcgc gcggggggga
     8461 gccggtgccg ccggccacgt cccgccgggc cgcgaccctc ggcgcggtgg cggcagtcgc
     8521 tctcatcctg ttggccgggc tgcgcctctt gatgcaggcc cggagcttca gcgagccggg
     8581 cgagtcgatc accctcgagc tgcttggaac cgtcatcggg accggctggg gtcgtggctg
     8641 ggtggcgcag gttctggccg ccggcctcgc cgcggccggc gccttcttcg cccgggtcgc
     8701 gcccgccggc tggctctccg cggccgccgg cgcttcggcg gtggttctcg cggcgccatt
     8761 gaccgggcac gcctccggcg ccgagcgagc cggctcgtgg ggctatccgc tggatgccct
     8821 ccatgtgctg ggagcaggtg cctggatcgg gaccctcatg gtcttgctcc tgactggtct
     8881 gatcccgtcc cgtaccgagc cggccgaagc gcggggccga accgtggcga gactgaccca
     8941 cgcatttcac ccggttgcgc tggtgggagc cagcgtcacg gtgttggccg gcaccctgct
     9001 ctcgtggcgg ttcctggagg gttcgctaag cggtctctgg acttcaggat ggggccggac
     9061 gctcttgctc aagctggtgc tgttgagcgg tgtggcggga ttcggggcat ggaactggcg
     9121 ggtggtgcgt cccactctgg gcagcgctga ggctgccagg aaactgaccc gctccgcgct
     9181 cttcgagctc gcgatcgcca ccgcattgct ggcggcgacc gcggtcttgg tggcgcggcc
     9241 ccttcccggg gaggattgac gtgagaaccc gctggattgc ctgtctgctt ctgttcaccg
     9301 gcgtcgcacc ggtttcagcc cagggcctgg gcgtctccgg ggtcgcctcg acgctggggc
     9361 tgggagcgga gctttcctat cggaccggct ccctcggctt ccgaggcgga tatatgctgt
     9421 tcaactacag ccgcaacgat caattggtcg agggcgttcg ctacgatctc aaacccaagc
     9481 tgcggaatgc gcagctgggg ctggacgtct acccgctggg caaggtgttc cggttgagcg
     9541 ggggcttggc ctacgcggtg tcccgggccg aagggctcgg cgtgctggac caacccatcg
     9601 tcgtaggggg acagagctac caaccctccg aagtgggaga gctggtcggc gaactgcgct
     9661 acgatcggaa gtggatgccg tgggtcgggc tgggcgtggc gagcggaggc cgcgtggcgg
     9721 tgacatttga cgtcggcgtg atgttcgccg ggcatcccac cgtccagctc agcgccagcg
     9781 gcggctccct gaccggaccc gaacgcgttg tgctggacca gaacgtggcg atggaggagc
     9841 tggagttgca gcaggccatc gacgacgaga agtgggcaaa atactacccg atcgtatcgc
     9901 tgggcctgag attccgcctc tgaggtttcc gtcgagaggc ctccctactc cctactccct
     9961 actcaggact caggactcag tactcaggac tgagtactag ctgttcagac tggtagtccg
    10021 accgctcgca tcagttccac cgcattgctc cgccggacca cgccgggccg cagccggtag
    10081 tcgaaccgga gggtgccgtc ctccagcgtg tcctcgaagt gcacgttggc catgtccggg
    10141 gccagtgcct cggcgatctc ggccagcgcc agatcgtgcg tggtgaccaa tccgatcgct
    10201 cctcgtcgca ccaggtgctc cacgatcgcg cgggccccca gggcgcggtc gtaggaattg
    10261 gtgccgctca gcagctcgtc gagcaggaac agcaccggcc gctcgccctg gagcagatcc
    10321 accgtgcgcc ggagccggcc gatctcggcg tagaaccggg actgcccctg ctgcagggaa
    10381 tcctggggcc ggaatgaggc cccgatccgg agggacgaga gccggaaacg gcgcgcgctc
    10441 accggcgcgc cggcctgagc cagcaccacg ttgaccccga cggcccgcag cagggtgctc
    10501 ttccccgaca tgttggaccc actcaccacc agcgcccgag gtctaccgcc acccagtgtc
    10561 aggtcgttag gcaccgctcg gccgcgcggc aacagcgggt ggaccagggc ttccgcctcc
    10621 aacacggcct cgcttccctc ggccagctcg ggctcggcgt caccggggtg ctccgccgag
    10681 taggtggcga gcgaggccag cgcttcgagc tcccccagcg cggtcaccca ctggcccacc
    10741 cggacaccgt gccgcctgcg ccaccgttcg atcgagaggg cgagctgggt ggtccagagc
    10801 agcagcgccc caaaaggagc gaagagctgg ttgcggcggg aatccaggag ccccactcgg
    10861 cggtcgagac ccgcgagcgc gccagaggcc ggctggtggc tgccgcgcag ccgcccggcg
    10921 atctcggcca gcaacggagc ggtccacgac tcctgctcca gccgggcgat caggctggcc
    10981 atgtgatcga ggtcccgcag cggccgctct accgcggcga cgatcccccg cacccgctcg
    11041 cgcagtaacc ccgccagtac caccccggcg agaatagtgc cggtcggaac ccagggcgac
    11101 cacccgtacc agattgcgcc cgccagggcg accacgttcc cgagggcgat acccagggcg
    11161 gcgggcgccg cccaggcagg caggtcgagc ggctgtgccg tgccccaccg ggccagcaca
    11221 tcccgctcca tgcccttccc gacctgcgac ccgatcaccg ccacgtccag ccgcaggcct
    11281 tcacggctcc gcagctcggc gatggcctgc tgtcgccggg tcacctcccc cggcagagcg
    11341 ggggccttga tccagtcggc gagggtctcg cggccggctg aggtctctgc cgtgcaaagc
    11401 aattcgaaca acgaccccgg gccgaacaga tcgagatcgt cggcaaagag atgatcgtcg
    11461 gaccggaacg gctcccctcc attgccgccg ccggcccagc ggtcctccag ccgggcaacg
    11521 ccccgttcgt accaggcgac cgcccgccgt atccggtcgc gccgccgtac cacgatctcg
    11581 tggacaatca tgaatccgac gtaggccgcc agcggcaaca aggcccactg gaggggcggc
    11641 gagccgcgaa tggcgcccag ccacagcagc gcgatcgcgg ccaggaagga cccgccccgg
    11701 gccgccgcaa gcaggttgaa gcgacggctc gcctcggcgt cgtttcgccc cagtcggtcc
    11761 agctcgcttc gataacgcag caggatctcg gattccatca tcgcagcaag gaagcagaca
    11821 aggtgcgctc ccagaagcgt cccaggtcac gcagcaccgc gacccagtcc cgctcctgtt
    11881 cagcagtcgg ccgcgccgcc gcgcccggaa agggcggctc ggcgccgagc actagcagca
    11941 aaccttcgct ttgggcttcg agcaaggggc cgaacaggaa cgcggtcagc agttgccggc
    12001 actcgtcggc gtcactgact gccccgaaga tgggccggga gcgatgcggc ggctgggccg
    12061 agagctcacg ttccagctga agaaagcaat gcgccaacgg ccaggcggcg agggggatcc
    12121 gaagccggcg gccccttcgg cccctcccat attccggatc gggggggagc tcacccgcaa
    12181 tctcgaggcg gggaggcacc gtctcttcgc cggtgaacca ctccagcggg agggcgtagg
    12241 cttgggcgat gacctgcagg gttcggaggc cagggctggc tgtatggcca gcgtaaaggt
    12301 ccctcagcgt agcataaggc agcccggtgt ggagggccgc ttcccggaga ttgccgaggt
    12361 gggcctgatc gatcaggtcc cggatttggc gggtgagcgg atgctggata tccgggagcg
    12421 gccctcgagg ccgtcccgga cccagccggc gtggaactcg caccctggca acatactaaa
    12481 atacatggcg gagttccaca caatcattta acggcgaacg gcaacccggg ttgggcgatc
    12541 tcgtagtgtg gcctcgacat ccgccagagt cacggccctg ggcaccgtcc actcaccccg
    12601 cttttcggtt ggcacggcga ccgagaagac ctgcccctcg gagatctgaa ccagcgccgt
    12661 ggcgccgtca tcctttccct gtgagaccgt gatcatcagg gtccactcac ccacgtcgcc
    12721 ccactggttc ttcatggcgt agacgccggg gcgctcggtg cgctcgaact tgagcgtcac
    12781 acttttccgc tcaccgttca cgatgccttc ggcgcgtccg ctcactggaa agccgatcgg
    12841 cgtgccgtgg tggaaggcat gcaccagcag atacgcgccc cgggtggacg cgtcgtaggg
    12901 gttggccggc agctcgatgg aaatccaggg cggaccagcc tgggcgacgt cgggagccgc
    12961 cgccagcaga gagagcgcgg ccagagtcga aagaaccggt gtcagtgcgc gcatgtttca
    13021 cctcgaaggt tggagtggat ctcgcgactc caatgagatg ccgcgcgcga cggcgaggtt
    13081 tatcggctga ccgtgatcgc acccttgaag gaacgggccg acacctgggc accgccggtc
    13141 cccatcatga acgacagcgg cttgccccct ttgatggcgc tgcctttggg gaccagcttg
    13201 ttgtagatca cgccgccgat ggtggccagc agcagctcgg catcgaccgg ccccacgaac
    13261 cggagcgtga tgtcggccga gtgagtctcc gcctcgagcg caccgccgag cgccacgttg
    13321 ccgctgaaac tcagggggcc ggtcacggtc tcgagccgac ctcgctccag ccgttcggct
    13381 gccacgtcga tggacccgcc gaccgtcgcc gcggtgatgt caccgccacc agcccgcacc
    13441 acgatactgc ctccgccggt gcgaagccgc tggacgccct tgcctccctc ggcgatcacc
    13501 gatccatcga tggtctcggc ggtgaggacc cggggcgctc cgttgacagt gagcgtgccg
    13561 ttcaccgagg tcaggtcgat ttccccctcg acgccggtga tttcgacgct ggccgaggcg
    13621 gtcttgaccc agaggcgggc ggcccgggga aggctcacct ccagggtgga tgcaggcccg
    13681 gagccggacc agtccttggt ctccaccccc agcttggatc ccttggctcg gccgccaccg
    13741 taaaaggaac ctccacccgc ggggatgccc ccggtgacgg ccaccgagtc atgggcccac
    13801 ccagtgatgc ggagccggcc ggcagcgaga tgaatccgga tggaggcgtc ggcgtcgatg
    13861 gaccagcccc gattcacctt ctcctgtgcc gcgagggcgc cgggtaggag aagggcgatc
    13921 accacgcacc ggagcatcag ctctccacgt ggagcgctgc cacccgccgc aggacatcga
    13981 gcttgcggcg aagggcggac agatggagtt gacgcaggac ctcgttcccg ggatcggcct
    14041 ggagggcgct cgaggtctcc tcgatagcgg cgtccagggt ctgcacatcg cgacgcacgg
    14101 ccggagcggc ggccgccgcg attctcccct cgcccagcag ggacgcctcg agctcggaag
    14161 cggccatctg gtaaacgacg gtgcgggact ggtcccattc tggagtcggg agctgctggt
    14221 cgcgacccgc tcctctctga ctccaccagc cagctccgac gatcaacccg atcgccgcag
    14281 ccagggggag ccatctgagg gcgaggcccc ggctcctcgg cttcaggcga gattcgatcc
    14341 cggtccacag cggacggctg ggagccacgg cgcgcgggag ggccgccacc cgaggagcca
    14401 ggaagcgggc cgcggcttcg tcggcaccgc actcctggca cgacatcaag tgacccctga
    14461 tagccacggc gacctcggcg tccactgcgc cggcgacgta ctgatcgagc agatcgcgaa
    14521 cggattcgca ggtcatcggt ccaagacctc acgcaacagg cggcgagccc ggaagagatg
    14581 cgccttgctg gttcccactg cggttccggt gagccgggcg atctcctcgt gccgcaaccc
    14641 ctcgacatcg tggagcacga acacgttccg gcatccttcc ggtaaccccg ctatggcccg
    14701 ctccaagtcg atcgcggctt cggcttcacg tgccgcacca gcttgcgctt ccggcggctc
    14761 atggcggggc tcgaccttga gctcccgccg ccgggtggtc cgaagtgcca tcagcacttc
    14821 attcatggcc aaccgataga gccaggtcgc aaaggcactg tcgccccgga agctagccaa
    14881 tcgctcccac acccggacga acacatcctg ggtcagctcc tccgcccagc cgggctcgcc
    14941 agtcagccgc agacagaggg cgtgaacccg gcccacgtgg gcatcataga ccagccgaaa
    15001 cgccccagca tcgccggcct gggccgcgcg gattcgcgcc agctcggctg gcaccggagt
    15061 gggtgggtcc gccgggacgg cgccggtcat ggtagcgagc gacagggccc tcgtgatcac
    15121 atcggtgaga tgccggagtg gacaggaggg tttagccccc gagcacgttc agtcgctgcc
    15181 gtacccggcg gggttcccga cctgccagcg ccacgtgtcg gcgcacatgg cgtcgaggtc
    15241 ccgcaccgcg gtccagccca gctcgacccg ggcccgcgaa gggtcggcat agcacgcggc
    15301 cacgtcgccg ttccgacggg gcccgatccg gtagggcacc tcgcgaccgg aggcccgttc
    15361 gaatgcggcc accatctcca gcacgctata acctcggccg gtcccgagat tgtaggtgaa
    15421 gacgcccgcc gagcgctgca gctttgccag cgcgcgctcg tggccctggg ccagatccat
    15481 gacgtggata taatcccgca ccccggtgcc atcaggggtg gggtagtccg agccgtgtac
    15541 cggcagctcc ggcagtcggc cgatcgccac ctgggagatg tagggcagga gattgttggg
    15601 aatcccgttg gggtcttccc cgatccgccc gctcgggtgc gagccggccg ggttgaagta
    15661 gcgcaggatt cccacccgcc attcgggatc ggcccggtgc aggtcgcgca ggatatcctc
    15721 gatcatcagc ttggagcggc cgtaggggtt ggtcgcctgg agggggaagt cctcggtgat
    15781 cgggacggtg tgaggatcgc cgtagaccgt ggcggacgag ctgaacacca tggatttgac
    15841 gccgtggcgt tccatcacgt cgcacagcac cagagtgccg ctgacgttgt tgtgatagta
    15901 gcgccgcggc tgactcaccg actccccgac cgccttgagg ccggcgaagt ggatcacggc
    15961 gtcgatcccg ccggcgaacg ccgcatcgag cccgggctgg tccagcagat cgacctggtg
    16021 gaattcgacc tcccgcccgg tcagttgctc cacccggtga accgcttcgt acttgctgtt
    16081 gctcaggttg tcgaccacca ccaggtcgtg cccggcttcc agcaacacga ccgccgtgtg
    16141 ggaaccgatg tatcccgcgc cgccggtcac gaggatgcgc atcgcctact tcatccggtc
    16201 gagcagcgcc tggagccggg ggaacgactg ggcaatgtcg gtgagcgaga ccgcacccac
    16261 cgacagtcgg aaccagccgg agtcctgcgg caggccgaag gcctggaa
//
LOCUS       DASWKS010000418         5733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2808393, whole genome shotgun sequence.
ACCESSION   DASWKS010000418 DASWKS010000000
VERSION     DASWKS010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2808393"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..744)
                     /locus_tag="VGA78_11925"
     CDS             complement(274..744)
                     /locus_tag="VGA78_11925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894627.1"
                     /translation="MLLDALMLGALPAIAPPVAYRYMNPRYQSRWTEQVLKQVHPGDT
                     LLVIERQLPGLLSPAALQGASGAISGSWGDVEYSMEYRAGTVHSNQLGSRSPLDGHLE
                     AFEVPTITKLGGCGESVSRDRVSNTKCWRGRSAPSAGAVIHAPAQCSACNSSIP"
     gene            complement(1194..1421)
                     /locus_tag="VGA78_11930"
     CDS             complement(1194..1421)
                     /locus_tag="VGA78_11930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894628.1"
                     /translation="MNDDRVVRLLEEIRDNQRQLLEQYQLALQNQRQSIEMQRAAMAR
                     PRGLLVAVGVIIVIVAGIALVLLRYVLRHYA"
     gene            1550..2362
                     /locus_tag="VGA78_11935"
     CDS             1550..2362
                     /locus_tag="VGA78_11935"
                     /inference="COORDINATES: protein motif:HMM:NF039197.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5694 domain-containing protein"
                     /protein_id="HEX9894629.1"
                     /translation="MLPGQGESQSPVQDFQSYPRAQVVVLGVFHFQDAGLDSYKPHFR
                     FDIRSQERQRELEDVVDRLARWRPTRIAVEHRPDRQARLDSLLRLYPGAGTDTLRNEI
                     YQVGLRLAKRLGHSGVFAIDAPARRLDSAMTEAEYNRQQAALRPGPLASDWDARFTAL
                     YRHDDSLKTSRSLRETLLYINSEERLALGHGHYLVGNLLNGEVGNYFGTDGFLSGWYN
                     RNLRIYSNIVRLIRSPEERILVIIGAGHVPIIRHALQASPVVSLVNVETVLR"
     gene            2368..2754
                     /locus_tag="VGA78_11940"
     CDS             2368..2754
                     /locus_tag="VGA78_11940"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX9894630.1"
                     /translation="MTAAAPLDLSRRERQIMAVIYRLGRATAAEVMAELDDPPSYSAV
                     RAHLRVLEEKGHLRHEPDGPRYVFLPTMPRERAREGALQHLVQTFFNGSTSQAMAALL
                     DATPGISQAELHRLSRLIDKARKEGR"
     gene            2756..5389
                     /locus_tag="VGA78_11945"
     CDS             2756..5389
                     /locus_tag="VGA78_11945"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX9894631.1"
                     /translation="MASMEFVLTLAAKGVVVLVMAAVASALFARASAALRHLAWSAGL
                     VGLLLLPVLGFILPEVPVVRWQPTTPVSMAPVLAGPAAAPTGSGPVIAGADLPSAETP
                     VATAAPIPVMEPPTAQAYVVEPPTNLAPDWAAPSFSLSPTTSPTIRLLQIWAIGSAVL
                     LLWLVLGHARAARLARRASRDLSPEWDELIDEAAALAGLTIPAEVRESPDLTVPATVG
                     ILHPVVLVPAAGVEWSFSHRRDVLIHEFAHVLRRDCLTHSVGWIACALYWMNPLAWVA
                     LWRTRVEREHACDDIVLRAGARPSEYAEELLQTAHLARVPFATGAASLAMARRSQLST
                     RLLAILDAGRRRNPISTGAAAALGFGAAVVVLPVAALSPAAATIAENPAPIVAYVDET
                     GPVPVTPFAVASNPVGAAFDEAASASTTPLAMMPGPIMTGSIGAQQSQGQTLCATSST
                     GRNRKVNVSRSMSFSGSGTGEDGDGNSYVVWSGLDCSVVIHVTGLVRFNAEENDVAGF
                     TRSGRFEVTHTVGDRERRYLVRSRNGELERSYFIDDRPAELDAEAQRWRGIVVLEYIR
                     RSGHDAEDRTRRILQRAGIDGVLAEIDEIGSDWAQSKYFMALLASSRLDDAAAAKVIG
                     SAGRRIESDHYLAQILGAVPGSALNGSQARAAYLTASDGIESDHYVTQTLTRILASGS
                     LEPAATRSLLQRASRMESDHYLATLLGGLVKTGTVRGELLADYLTAAKQIESDHYKAQ
                     VLGQLVPEFAGEPELLAAALTAAQTIESDHYLGEYLKQVLLAKALDGSAIEPFFAAVR
                     TIESDHYRAGVLIAALGRSSAPIVVTRTLEAAPEIESDHYLAEVLVAAKRLGLTAEQQ
                     ALLKKAADSIESDHYLGKVLR"
     gene            complement(5432..>5733)
                     /locus_tag="VGA78_11950"
     CDS             complement(5432..>5733)
                     /locus_tag="VGA78_11950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894632.1"
                     /translation="LYFLVRNDGKFLVKHRQGAETHSITDWTAHPSTARHTAASGATV
                     KNVLAVTAGEDSVRMFVNGQQVSAYPATVMKVDGVVGLRVNHNLNLHVSRLELTK"
BASE COUNT          973 a         1983 c         1840 g          937 t
ORIGIN      
        1 gccatccggg tggcggagtt tgtggaagta gacaaagcgg cggacccatg acacgtatgc
       61 ctgcgtggta cgccgggata actggtgacg gcggagcgcg gcgttcagtc gcgacaggag
      121 cttgggccca cccgacccgt ccgcggggat aaccatggat accggcatta tgcggcgggg
      181 aatcgggctg gcgacaacca gattcgcgcg gcaccactcc aggatcacgc gatgagagaa
      241 ccaacccgac tggatcggcg atatgcagtg atatcacggg atacttgaat tacatgcaga
      301 acattgcgcg ggggcgtgaa tgacggcgcc ggcgctgggg gcgctccgcc cgcgccagca
      361 cttcgtgttc gatactcgat cacgcgaaac actttcaccg caaccgccca gcttcgtaat
      421 cgtcggcacc tcgaaagcct ctaagtgacc gtcaaggggt gagcgggacc cgagctggtt
      481 cgagtgcacg gtccccgccc gatactccat cgaatactcg acatcgcccc aactgccgga
      541 gatcgcgccc gacgccccct gcaacgccgc cggcgacagc aacccaggca actgacgctc
      601 gatgacgagc aatgtgtcac ccgggtgcac ctgcttgagg acctgctccg tccagcggct
      661 ctggtacctc gggttcatgt agcggtacgc caccggtggg gcgatcgccg gcagcgcccc
      721 cagcatcagc gcgtccagca gcaccggagc cacaaaccgg ggaacggttc gccaccacgc
      781 cggtccggac gtcgtaagaa ggccgaggcg ccaaccaagc cggtagagcg cgcccgcgac
      841 cacaccgatg atcgctgcca ggggcgagca tcagcagcga gccccgggat tggaagagga
      901 accaaccggc gagcgcactg aagactgcga cggcgtacag cccggaaccg gcgagaaacc
      961 cgaccagacc caagcgctgg acagccaggc tgaactgccg cggctagggg accgccgcta
     1021 ttaaccaggc gatccccgca aagaagggag gccagaacaa tatggcgtcg acgtcggtga
     1081 cccggtgatg gccccagagt cagactccac cagatatgcg ccagatgggc tacgaagcac
     1141 ccgatgccca gaccggcgaa gctcaccgcc gcatgagctc gtctcatgat gggtcaggca
     1201 taatgccgaa ggacgtatcg cagcagaacc agggcgatgc cggccacaat cacgatgatg
     1261 accccgaccg caaccagcag acctcgtggg cgggccatag cagcccgttg catctcaatc
     1321 gattgccgct ggttctggag tgccagctgg tattgttcca gcagttgccg ctggttatcg
     1381 cggatctcct ccagcaggcg gaccacccgg tcatcgttca ttgaattgca gcctcccccc
     1441 ccgtggtttc ccggcaccca ttgacaaatc ggactggtgc tggaaattta gcagcgtgct
     1501 agttttccag catcgacccg tttgggccgc cgccctgatc ctctcggcca tgcttcccgg
     1561 ccaaggggag agccagagtc cagtccagga cttccaatct tatccccggg cccaggtcgt
     1621 ggtcctgggc gtgttccact tccaggacgc cgggctcgat tcctataaac cgcatttccg
     1681 cttcgacata cgctctcagg agcggcagcg cgagctggag gatgttgtcg accgcctggc
     1741 ccgctggcgt cccacgagaa tcgcagtcga gcaccggccc gaccggcagg ctcgtctcga
     1801 ttcgctcctc cgactctacc ccggggccgg caccgatacc ctgcggaatg agatctatca
     1861 ggtcggcctg aggctggcca agcgcctggg ccactccggt gtcttcgcca tcgacgcgcc
     1921 ggcacggcgc ttggactcgg ccatgaccga ggcggaatac aaccggcaac aggcggcgtt
     1981 gcgccccggc ccattggcga gcgattggga cgcgcgcttc accgccctct accgccacga
     2041 tgattcgctc aagaccagcc gttccctgcg cgaaacgctc ctctatatca acagcgagga
     2101 gcggctggcg ctggggcacg gccattacct ggtcggcaat ctcctgaacg gcgaggtcgg
     2161 caactacttc ggcaccgacg ggtttctgag cggctggtac aatcgcaatc tccggatcta
     2221 cagcaacatc gttcgcctga ttcgctctcc ggaggagcgg atcctagtca tcatcggtgc
     2281 cggccacgtt cccatcatcc gccacgccct ccaggccagc ccggtggtca gcctggtcaa
     2341 cgtcgaaacc gttctcaggt gattctcatg accgcagcag ctccgctcga tctcagtcgc
     2401 cgcgaacgcc agatcatggc ggtcatctac cggctcggcc gggcgaccgc cgccgaggtg
     2461 atggccgagc tggacgaccc acccagctat agcgcggtgc gggcccacct gcgggtgctg
     2521 gaggagaagg gacacctccg gcacgagccg gacggccccc gctacgtctt tctgcctacc
     2581 atgccccggg aacgggcccg cgaaggcgcc ctccagcacc tggtgcaaac ttttttcaac
     2641 ggttccacgt ctcaggcaat ggcggcgctg ctggatgcca cccccgggat ctcccaggcg
     2701 gagctgcatc gcctgtcccg cctgatcgac aaggctcgga aggagggccg ctgacatggc
     2761 ctcgatggaa ttcgtgctga ccctcgccgc caagggcgtg gtggtcctag tgatggccgc
     2821 ggtggcctcg gccctgttcg cgcgcgcgtc ggccgcgctg cgtcatctgg cctggtcggc
     2881 cgggctggtg gggctcctgc tgttgccggt gctcggattc atccttccag aggtccccgt
     2941 ggtgcggtgg caacctacca cccccgtgtc gatggctccg gtcctggcgg ggccggctgc
     3001 tgcccctacc ggatccgggc cggtcatcgc cggcgcggat ttgccttctg ccgagacgcc
     3061 ggtcgcgacc gcggcaccga tccccgtcat ggaaccaccc acggcacagg cctacgttgt
     3121 ggaaccaccc acgaacctgg ctcccgactg ggcggcgccc agcttttcac tcagcccaac
     3181 caccagcccg acgattcgcc tgcttcagat ctgggcgatc gggagcgcgg tgctcctgct
     3241 ctggctggtg ctgggccacg cccgcgccgc ccggctggct cggcgagcta gccgggatct
     3301 gtcgcccgag tgggacgagc tgatcgatga agcggccgcc ctggccgggc tcaccattcc
     3361 ggccgaagta cgggagagtc ccgatctcac cgtgccggcc acagtcggga tcctccatcc
     3421 ggtggtgctg gttcccgccg ctggggtcga atggtcgttc tcccatcggc gcgacgtgct
     3481 gatccacgag ttcgcccacg tcctgcggcg cgactgtctc acgcactcgg tcggctggat
     3541 cgcgtgcgcg ctctactgga tgaacccgct ggcgtgggtc gccctgtggc gcacccgggt
     3601 ggagcgggaa catgcctgcg acgacatcgt gcttcgggcc ggcgcccgtc ccagcgagta
     3661 cgccgaggag ctgctgcaga ccgcgcatct ggcgcgggtg cccttcgcca ccggcgccgc
     3721 cagtctggcg atggcccgcc ggtcccagct ctccacccgg ctgctggcga ttctcgatgc
     3781 cggccgccgg cgcaatccca tcagtaccgg ggccgccgcc gcgttaggct tcggcgcggc
     3841 tgtggtggtg ctcccggtgg cggcgctgtc gccggccgcc gcgacgatcg ccgaaaaccc
     3901 cgccccgatt gtcgcgtacg tcgacgagac cggaccggtg ccggtgaccc cgttcgccgt
     3961 ggcctcgaac cccgttggcg cggccttcga cgaagccgcg tcagcctcga ccaccccgct
     4021 cgcgatgatg ccaggtccga tcatgaccgg ctcgatcggg gcccagcagt cccagggcca
     4081 gaccctctgc gccaccagct ccaccggacg caaccgcaag gtgaatgtca gccgatcgat
     4141 gtcgttctcc ggttcgggta ccggtgagga cggcgacggc aacagctacg tggtctggtc
     4201 tggcctagac tgcagcgtgg tgatccacgt aacgggcctg gtccggttca acgccgagga
     4261 gaacgatgtt gccggcttta cccggagcgg ccggttcgag gtaacccaca ccgtggggga
     4321 tcgcgagcgg cgctacctgg ttcggtcccg caacggcgag ctggagcgca gctactttat
     4381 cgacgaccgt cccgccgagc tcgacgccga ggcccagcgg tggcgcggga tcgtggttct
     4441 cgaatacatc cgccgctcgg ggcacgacgc cgaggaccgc acccgccgga tcctgcagcg
     4501 ggccggcatc gacggcgtgc tggccgagat cgacgagatc gggagcgact gggcccagag
     4561 caaatacttc atggcgctgc tggccagctc ccggctggac gacgccgcgg ccgcgaaggt
     4621 gatcggctca gcgggacgcc ggatcgagtc ggatcactat ctggcccaga tcctcggcgc
     4681 ggtccccgga tcggccctga acggcagcca ggcccgggcg gcctatctca ctgcctccga
     4741 cggcatcgag tcggaccact acgtcacgca gacgctcacc cggatcctgg cgtcgggctc
     4801 gctcgagccg gccgccaccc gctccctgct ccagcgggcc tcacggatgg agtcggatca
     4861 ctacctggcc acgctgttag gcggtctggt gaagaccggc acggtgcgag gcgagctgct
     4921 ggccgactac ctcaccgccg ccaagcagat cgaatccgat cactacaagg cccaggtgct
     4981 gggccagctg gtgcccgagt tcgccggcga gccggagctg ctggcggccg cgctcaccgc
     5041 cgcccagacc atcgaatcgg atcactacct gggcgagtat ctcaagcagg tgctgctcgc
     5101 caaggcgctc gacgggtcgg ccatcgagcc gttcttcgcg gcggtgcgca cgatcgaatc
     5161 ggatcattac cgggccgggg tgctgatcgc cgccctgggc cgcagcagcg ccccgattgt
     5221 ggtgacccgg accctcgaag ccgcgcctga gatcgagtcg gatcattacc tggccgaagt
     5281 gctggtagcg gccaagcggc tgggactcac cgccgagcag caggcgctgt tgaagaaagc
     5341 cgccgactcg atcgagtcgg atcattacct ggggaaagtg ctgcggtaac aggtcgaagg
     5401 cggtcgaagg cggtcttcga ccgccttcga cctatttagt gagctccagc ctcgagacat
     5461 gcagattcaa gttgtgattg acccgcagtc ccactacgcc atccaccttc atcaccgtgg
     5521 cgggatacgc actcacctgc tggccgttca cgaacatccg gacgctgtcc tccccggcgg
     5581 tcaccgcgag cacgttcttg accgtggcgc cactcgccgc cgtgtggcgc gcggtggacg
     5641 ggtgggcggt ccaatcggtg atggaatggg tctcggcccc ctggcgatgc ttcaccagga
     5701 actttccgtc gttccgcacc aggaaataga gat
//
LOCUS       DASWKS010000419         2909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2080492, whole genome shotgun sequence.
ACCESSION   DASWKS010000419 DASWKS010000000
VERSION     DASWKS010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2080492"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1216)
                     /locus_tag="VGA78_11955"
     CDS             complement(65..1216)
                     /locus_tag="VGA78_11955"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9894633.1"
                     /translation="MASLLPPQRELFDIPREVSYLNCGYMSPLPRESVAVGQRAMARK
                     ARPWTIRPPDFFESTDQARAAFAQLLGASADDVALIPAVSYGMAVACANLPLGAGQQV
                     LLLDEEFPSVIYPWRERARAAGAHAVLIPRPADDDWTGAVLERIDGRTAVAALPVCHW
                     TDGALLDLPRIGTRLREVGACLAVDATQSLGALPFDLGRVRPDFLIAAAYKWLLGPYS
                     VGFMYVAPRWQGGTPIEHNWITREGSEDFAALVQYRDGFQPGARRFDVGEPSNFALLP
                     AATASLAQILSWNVDRIATTLAGTTAELARRAARFGFIAVDPDRRAPHYLGLRLPGGL
                     PVGLGERLAAEQVYVSTRGTALRITPHVYNDAGDFDRFETALEGALRRG"
     gene            1315..2442
                     /locus_tag="VGA78_11960"
     CDS             1315..2442
                     /locus_tag="VGA78_11960"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9894634.1"
                     /translation="MNRSLLLGATLGLVTVVQPAAARQNGRAALLTRIDSVVQAEMAR
                     SKTPGMSVAVQRGNDILLARGYGLADVEHSVPASAETVYRIGSITKQFTAAAIMQQVE
                     AGKIGLQDELAKLLPGYPVQGHRVTLHHLLTHTSGIKSYTSLGPKFWNEASRMDLSDS
                     QLVALFQDAPFDFEPGAKWLYNNSGYYLLGMIVEKASGLPYRKYLRERLLEPLGLRAT
                     SYCAERPIVPHRAQGYEVREGVLMNDDPIGMNTPGAAGAMCSTVLDLLAWRRALFGNQ
                     VVNAESLGRMTTPVRLNNDSVTTYGYGLGIGTLEGHRSISHGGGINGFITQLSYYPDD
                     DITVAVLGNLGGAPSGRVAQLIARLMLGLSLPPPPAAGAPR"
     gene            complement(2463..2588)
                     /locus_tag="VGA78_11965"
     CDS             complement(2463..2588)
                     /locus_tag="VGA78_11965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894635.1"
                     /translation="MTLIRRIDTYKNNRNPEHPWFPLHPFKTLFLLMDYAPSADG"
     gene            complement(2633..>2909)
                     /locus_tag="VGA78_11970"
     CDS             complement(2633..>2909)
                     /locus_tag="VGA78_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894636.1"
                     /translation="LGTVLLFSIEGDKGVIATTTAGVTLGLILGASLGKDGPDRAGGG
                     ALLFAPALLSGEGRPRLGLPLPMPARLPAESDRITTGWRLSLLDARF"
BASE COUNT          505 a          975 c          960 g          469 t
ORIGIN      
        1 gaccaattcc ttttgcgggg tgatcctgtt gtggaccagg atcggctgag cctggtcagg
       61 gaagtcaacc gcgccggagc gccccctcca gggccgtctc gaagcgatcg aagtcgccgg
      121 catcgttgta cacatggggc gtgatccgga gcgcggtgcc gcgggtcgag acatagacct
      181 gctccgccgc gagccgctcc cccaggccca ccggcagacc gcccggtagc cgcagtccga
      241 gatagtgggg cgcccggcgg tccgggtcga ccgcgatgaa accgaaacgg gcggctcgcc
      301 gggccagctc agcggtagtc ccagccaggg tggtcgcgat ccggtcgaca ttccaggaca
      361 gaatctgagc taacgacgcg gtggcggcgg gaagcagagc aaaattcgac ggctcgccca
      421 cgtcgaaccg gcgagcgccc ggctggaagc cgtcacggta ttgtaccaat gcggcgaagt
      481 cctccgatcc ttcccgggtg atccagttgt gctcgatggg agttccaccc tgccacctcg
      541 gggccacgta catgaagccc acgctgtagg gacccagcag ccatttgtag gccgcggcga
      601 tcaggaaatc gggccgcacc cgcccgaggt cgaacggcag agcccccagg gactgggtgg
      661 cgtcgacggc gaggcatgcg cccacctcgc ggagccgagt cccgatccgc ggcagatcca
      721 gcagcgcgcc gtcggtccag tggcagaccg gcaaggccgc caccgcggtg cggccatcga
      781 tccgctccag cacggccccg gtccagtcgt catcggccgg tcggggaatg aggacggcgt
      841 gggcacccgc ggcgcgagcc cgctcccgcc agggataaat tactgagggg aattcctcgt
      901 ccagcaggag cacctgctga ccggcgccga gcggcagatt ggcgcacgcg accgccatgc
      961 catagctcac cgccgggatc agcgccacgt cgtcggccga agcacccagc aactgcgcga
     1021 aggcggcccg ggcctggtcg gtcgactcga agaaatccgg cggccggatg gtccagggac
     1081 gggccttccg cgccattgcc cgctgtccca ccgccacgct ctcccgcggc agcggcgaca
     1141 tgtagccgca gttgaggtag ctcacctcgc gcgggatatc gaacaattcg cgttggggcg
     1201 gaaggagcga tgccatgggg accctcgtgc gcctggggtg cgccggcccg gtgatgactt
     1261 ctggggaatc cgcggtataa ttctttgtat acaatctaca gccgatcgga acccatgaat
     1321 cgctccctgc ttctcggtgc cacgctgggc ctggtcaccg tcgtccaacc cgccgccgct
     1381 cggcagaacg gccgggccgc gctgctgacc cgaatcgatt cggtggtcca ggccgaaatg
     1441 gcgcgctcca agacgccggg catgtcggtc gcggtccagc ggggcaatga cattctcctg
     1501 gcccggggct acggcctggc cgacgtggag cactcagtcc cggcctcggc cgagaccgtc
     1561 taccggatcg gttccatcac caagcagttc acggccgccg ccatcatgca gcaggtggaa
     1621 gccggcaaga tcggactcca ggatgagctc gccaagctgc tgccgggcta tccggtccag
     1681 ggccatcggg tcacccttca tcacctgctg acccacacct cgggaatcaa aagctacacc
     1741 tcgctcgggc ccaagttctg gaacgaagcc tcccggatgg acctgtccga cagccagctg
     1801 gtggcgctgt tccaggatgc gcccttcgat ttcgagcccg gcgccaagtg gctctacaac
     1861 aactccggct attacctgct ggggatgatc gtggaaaagg cgtccggtct gccctaccgg
     1921 aagtacctgc gggagcggct gttggagccg ctgggactgc gggcgacgtc ctattgcgct
     1981 gagcgcccca tcgttccgca ccgggcccag gggtacgagg tgcgcgaggg ggtcctgatg
     2041 aacgacgatc ccatcggcat gaacaccccc ggtgccgcgg gcgcgatgtg ttcgacggtg
     2101 ctcgacctgt tggcctggcg gcgggcgctg ttcggcaatc aggtggtgaa tgcggagtcg
     2161 ctgggccgga tgactacgcc ggttcgcctc aataacgact cggtcaccac ctacggctac
     2221 ggtctgggaa tcggcaccct ggaaggtcat cgcagcatca gccatggcgg cgggatcaac
     2281 gggttcatca cccagctcag ctattacccc gacgacgaca tcaccgtggc cgtgctcggc
     2341 aatctgggcg gggcaccatc cggtcgggta gcacagttga tcgcgcggct gatgctgggt
     2401 ttgagcctcc cgccgccccc ggccgccggg gctccacgct gacggcaatc gaccgtctgc
     2461 tctcagccat ctgcgctcgg cgcgtagtcc atcagcagga aaagcgtttt gaacggatgc
     2521 agcggaaacc acggatgctc cggattcctg ttgtttttgt aggtgtcgat ccgccgaatc
     2581 agagtcatcc gctgaatccg ttccgaccct tcggcctgga tgctcgaagg ctttagaaac
     2641 gggcgtccaa cagggacagt cgccaacccg ttgtgattcg gtctgactcg gccggcaatc
     2701 gggccggcat gggcagaggc aagcctagcc gcggtcgtcc ctcgcccgac aacagtgccg
     2761 gagcgaacag cagtgcgccg ccgccggcgc ggtcagggcc gtccttcccc agggatgcgc
     2821 ccaggatcag accgagggtc acgcccgcgg tggtggttgc gatcacccct ttatcccctt
     2881 caatactgaa gagcagtacc gtgccgagg
//
LOCUS       DASWKS010000420         4809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2080550, whole genome shotgun sequence.
ACCESSION   DASWKS010000420 DASWKS010000000
VERSION     DASWKS010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2080550"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1016)
                     /locus_tag="VGA78_11975"
     CDS             complement(<1..1016)
                     /locus_tag="VGA78_11975"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9894637.1"
                     /translation="MHGPVHARPDWAPLVAPVFQSTTFVNPVGGEEEVLYTRYGNNPN
                     QVELSRKYAMLEGSEDAVVLSSGMAATALAHLAVLRPGDHLLASRWIYGGTQQLFDQE
                     FGRLGISVTYVDPEQPRQWRKLLKKTTRALFIETPTNPLIRVLDLGVPSQVAREYGVA
                     LLVDGTFASPMNFRPLEHGADVVITSGTKYLNGHSDVIAGAVAGSSALIDEIIRLMRL
                     WGPAIDPHQAWLLNRGLKTLAVRMERHNANGMAVAMWAEQRKGIASVMYPGLPSHPDH
                     KVAVKALEGFGGMVGLLFEGGAPGSERVLRRLKLITHAPSLAGVESLVSEPRATSHRQ
                     LTPE"
     gene            complement(1049..1582)
                     /locus_tag="VGA78_11980"
     CDS             complement(1049..1582)
                     /locus_tag="VGA78_11980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894638.1"
                     /translation="MIQTIRLNDVLRETTQRPLRDLVTRPTGAAIRGRIQETILATGF
                     PTTRLDFSGVGFLDFSCADEIVAKLLRDSAADHYLVLWDLDETQAEAIDHVLERQDLA
                     VVAVPRGGSPLLLGAASAELRLAFRAVLEGGPGDAGRLASRLAWSLERAADALQLLAL
                     RRLVVAAHGTFSPLPLR"
     gene            complement(1664..2557)
                     /locus_tag="VGA78_11985"
     CDS             complement(1664..2557)
                     /locus_tag="VGA78_11985"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9894639.1"
                     /translation="MHVVDVPSYLDDKGIDTLAQGLGGWPPATRLLFDARATKWASPF
                     GFTALLTAGQALQELGAEPSRLAVPDSDDVRSYWAKAGFFRHAADLFELHGKVPRRAA
                     DESSDVLIPITPIRAADDVVTLVNGLGERVAELLSENLNLEARATPRFGMSLSEACQN
                     VVEHAGTGGWVAVHAYNWRKRLGRRVVVIAVSDAGVGFRASLDAAEARKYGDRWSDAA
                     ALEAALIHNISRFRDPGRGQGLAMIKRYLGAWQGKISIRSGTARLAIVPAWDDDIPLA
                     EGLAFFPGSQLQIVIPEQGAK"
     gene            complement(2557..3486)
                     /locus_tag="VGA78_11990"
     CDS             complement(2557..3486)
                     /locus_tag="VGA78_11990"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HEX9894640.1"
                     /translation="MPKVGVLGSLVWDEIHGRDPLTAPVEEWGGIAYALAGMDAALPA
                     GWEIVPLVKVGRDLAPQSQQFLRTLSKLVPGARCIEVPSPNNRVVLYYQAAERRCERM
                     SGGVPGWTWPELGPLVHDLDALYLNFISGFELSLGTAEALRQGFAGPIYADLHSLFFG
                     MRHDGVRVLQPLPDPLSWFGCFDVVQMNEEEMRQLSHQPLVAAATVLGAGAHTLVVTL
                     GPRGAVYVTDRRTDGPTGGPLRTALVPAPAIEAVDPTGCGDVFGATCCARLLAGDAVE
                     DAVRIANRAAARNATYRGATGLAAHLRGELVGA"
     gene            complement(3479..4486)
                     /locus_tag="VGA78_11995"
     CDS             complement(3479..4486)
                     /locus_tag="VGA78_11995"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX9894641.1"
                     /translation="MRYVVGIDIGGTNLVTGCVAEDGSRLIAHRTEPTRPEEGPDAVV
                     TRLAGLARATIDESRRIDPAGEILGVGVGAPGPLDTRTGVIFLTPNLGWVNLPLRRRM
                     ADLLELPTSLDNDANCAVFGEWWRGAARGSRHAIGFTIGTGIGGGIIVDGRLYHGASD
                     CAGEFGHTTIDPEGRHCKCGNYGCLEAYASGPAIALRTMEVLSSGADSRIPAMVGGDL
                     SKVTAQTVYQAAQEGDALGLEVVRDTAKYLGVGVANLVNVFNPEIVVICGGVTLAGES
                     LFAPLRQEVARRAFKPAVRVCRIVPGELTGTAGVYGAAASFLQLRQDDRVSHPGDRPG
                     A"
     gene            complement(4499..>4809)
                     /locus_tag="VGA78_12000"
     CDS             complement(4499..>4809)
                     /locus_tag="VGA78_12000"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX9894642.1"
                     /translation="PLRASAALIERATVLVTNDSAPLHLAGAVGTPVVALFGPTVPAF
                     GFGPTGAADRVVEVSGLACRPCSTHGPMVCPLGHHRCMIDLPVRSVLAAFDSRFVTTD
                     "
BASE COUNT          782 a         1676 c         1633 g          718 t
ORIGIN      
        1 tgctcgggcg tcagctgccg gtgggacgtg gcccggggtt cggagaccag gctctccacc
       61 ccggccagac tgggcgcgtg ggtgatcagc ttgagccggc gcagcacccg ctcactcccg
      121 ggcgcgccgc cttcaaagag caggccgacc atgccgccga agccctcgag cgctttcacc
      181 gccaccttgt ggtcggggtg ggagggcagc ccgggataca tcacgctggc gatgcccttc
      241 cgctgctcgg cccacatggc caccgccatg ccgttggcgt tatgccgttc catccgaacc
      301 gcgagcgtct tgagcccgcg attgagcagc caggcctggt gggggtcgat cgccggaccc
      361 caaagccgca tcagccggat gatctcgtcg atcagcgcgg aggaaccggc gaccgcgccg
      421 gcgatgacgt cggaatggcc gttgagatac ttggtgccgc tggtgatgac cacgtcggcc
      481 ccgtgttcca ggggacggaa gttcatcggg ctggcgaagg tgccgtccac cagcagagcc
      541 acgccgtact cccgggccac ctgtgacggc acccccaggt ccagaacccg gatcagcggg
      601 ttggtggggg tttcgatgaa cagagcccgg gtggttttct tgaggagctt gcgccactgg
      661 cgcggttgct ccgggtcgac ataggtcacg ctgatgccga gccgcccgaa ttcctggtcg
      721 aacagctgct gggtgccgcc gtagatccag cgactggcga gcaggtgatc gcccggtcgc
      781 agcacggcca ggtgcgccag cgccgtcgcc gccatgccgc tggagaggac gacggcatcc
      841 tccgatcctt ccagcatggc gtacttgcgg ctcagctcca cctggttggg gttgttgccg
      901 tagcgggtgt agagcacttc ctcttcgccg ccgaccggat tcacgaaggt ggtggactgg
      961 aacaccggag cgaccagcgg ggcccagtcg ggacgggcgt ggacggggcc gtgcacggcg
     1021 acagtggaga ggccaggcgt atgggtcttc atcggagagg aagggggctg aaggtgccgt
     1081 gtgccgccac gaccaggcgg cgcaacgcga gcaactgcag ggcatcggcg gcgcgttcga
     1141 gcgaccacgc cagccggctc gccagccggc cggcatcacc gggtccacct tcgagcacgg
     1201 cccggaaggc cagccgcagc tcggccgagg cggcgcccag gagcagcggg gagccaccgc
     1261 gggggacggc gacgaccgcc aggtcctgcc gttccaggac gtggtcgatc gcttcggcct
     1321 gggtttcgtc gagatcccac aacaccaggt aatggtcggc cgcgctgtcg cgcagcagtt
     1381 tcgccacgat ttcatcggca cagctgaaat ccaggaagcc gaccccgctg aagtcgagcc
     1441 gggtggtggg gaagccggtg gcgaggatgg tctcctggat ccggccccgg atcgcggcac
     1501 cggtgggacg cgtcaccagg tcacgcagcg ggcgctgcgt ggtctcgcga aggacgtcgt
     1561 tcagccggat agtctggatc accgcgtgag tttccaccgt ttacggttca ctggtaactg
     1621 ttccccgcta agcccgtctc ccctccccct ctcccgtctc cccctatttg gccccctgct
     1681 ccggaatcac gatctgcagc tgcgacccgg gaaagaaagc cagcccttcg gccagcggga
     1741 tgtcgtcatc ccaggccggg acgatcgcca gtcgggcggt acccgaacgg atcgagatct
     1801 tcccctgcca ggcgcccagg tatcgcttga tcatggccag cccctgtccc cgtcccggat
     1861 cgcggaagcg gctgatgttg tggatcaacg ccgcttccag cgccgccgca tcgctccagc
     1921 ggtcgccgta cttgcgggct tcagccgcgt ccagcgaggc acggaatccg acaccggcat
     1981 cgctcaccgc gatgaccacc acccgccgcc ccaggcgttt gcgccagttg taagcgtgca
     2041 ccgcgaccca gccgccggtg ccggcgtgct ccaccacatt ctgacaagcc tcggagagcg
     2101 acatgccgaa ccggggagtg gcgcgagcct ccaggttcag gttctcggac agcagctccg
     2161 cgacccgctc gcccaatccg ttcaccagcg tgacgacatc gtccgcggcc cggatcgggg
     2221 taatgggaat gagaacgtcg gaactctcgt ccgccgcgcg acgcggaacc ttgccatgca
     2281 gctcgaacag gtcggccgcg tggcggaaga agccggcttt ggcccagtag ctccggacgt
     2341 cgtcgctgtc gggaacggcc agtcgggatg gttcggcccc cagctcctgc aacgcctggc
     2401 cggcggtcag cagcgcggtg aagccgaacg gcgaggccca cttggtggcc cgcgcatcga
     2461 acaggaggcg ggtggccggc ggccagccgc cgagtccctg ggccagcgtg tcgatcccct
     2521 tatcgtcaag ataagacgga acgtccacga cgtgcattat gcccccacca gctcgccccg
     2581 caggtgggcc gccagcccgg tggcgccgcg ataggtcgcg ttccgggcgg ccgcccggtt
     2641 ggcgatccgc accgcgtcct cgacggcgtc gccagccagc agccgggcgc aacaggtggc
     2701 gccgaacacg tcaccgcatc cggtcgggtc aaccgcctcg atggccggtg ctgggaccag
     2761 ggcggtgcga agcgggccgc cggtcggtcc gtcggtccgt cggtccgtca catacaccgc
     2821 cccccggggg cccagggtga cgacgagcgt gtgcgccccg gcacccagga cggtcgcggc
     2881 ggccacgagc ggctggtggg acagctggcg catctcttcc tcgttcatct gaaccacgtc
     2941 gaagcatccg aaccagctga gcgggtcggg cagcggttgc agcacccgca ccccgtcgtg
     3001 ccgcatgccg aaaaagagcg agtgcaggtc ggcgtagatc ggcccggcga atccctgtcg
     3061 caacgcctcc gccgtcccga gcgaaagctc gaagccggaa atgaaattca ggtagagcgc
     3121 gtccaggtcg tgtaccagag gacccaactc cggccaggtc cagccgggca ctccccccga
     3181 cattcgttcg caacgtcgct cggcggcctg ataatagagg acgactcgat tgttgggcga
     3241 cgggacctcg atgcaacggg ccccgggcac caatttcgac aacgtgcgaa ggaactgctg
     3301 gctttggggc gccaggtcgc gtcccacctt caccaggggc acgatctccc atccggccgg
     3361 gagcgccgca tccatgccgg ccagcgcgta cgcgatccca ccccactcct ccaccggcgc
     3421 ggtcagcggg tcgcgtccat gtatctcgtc ccacaccagc gaacccagca ctccgacctt
     3481 aggcaccggg ccggtctccg ggatgggaaa cccgatcatc ctgccgcagc tgcaggaagc
     3541 tcgcggccgc gccgtagacg ccggccgtgc cggtcagctc gcccggcacg atccggcaga
     3601 cccgcaccgc gggcttgaac gcgcggcggg cgacttcctg ccgcagcggt gcgaagaggc
     3661 tctctcccgc cagcgtcaca ccgccgcaga tcacgacgat ctccgggttg aacacgttca
     3721 ccaggttggc gacgccgacc ccgaggtact tggcggtatc gcgcaccact tccagcccca
     3781 gcgcatcacc ctcctgggcg gcctggtaga cggtctgggc cgtgaccttc gagaggtcgc
     3841 caccgaccat ggcggggatg cggctgtcgg cccccgatga gagcacttcc atggtgcgca
     3901 gcgcgatggc cggtcccgat gcataggctt cgaggcagcc gtaattgccg cacttgcagt
     3961 gccggccttc gggatcgatg gtggtatggc cgaactctcc ggcgcaatcg gaggcgccgt
     4021 gatagagccg gccgtccacg atgatgccgc ccccgatgcc ggtcccgatg gtgaagccga
     4081 tggcgtgtcg gctgccccgg gcggcgcccc gccaccattc accgaagacg gcgcagttgg
     4141 catcattgtc gagtgaggta gggagctcca gcaggtccgc catgcggcgg cggagcggca
     4201 ggttgaccca acccagattg ggcgtgagga agatgactcc ggttctggtg tcgagcggtc
     4261 ccggggcccc gacgcccacg cccagaatct cgccggcggg gtcgatccgg cgactctcgt
     4321 cgatggtggc gcgggccagg ccggccagac gggttacgac ggcatcaggg ccctcctcgg
     4381 gccgggtcgg ctcggtccga tgcgcgatca gccgtgatcc gtcctccgcc acgcagcccg
     4441 tgaccagatt ggtgccgccg atgtcgatcc ccacgacgta tctcatggtc tccggtctct
     4501 agtcagtggt cacgaatcgc gagtcgaatg ccgccaggac actcctcacc ggcaggtcaa
     4561 tcatgcaccg atgatggccg agtggacaca ccatcggccc atgggtggag cagggccggc
     4621 aggccagacc ggagacttcg acgacccgat cggccgctcc cgtcggcccg aacccgaacg
     4681 ccggcacggt gggcccgaag agcgccacca ccggagtgcc gaccgccccg gcgagatgaa
     4741 gcggagcgga gtcgttggtg accagcacgg tggcccgctc gatcagcgcg gcagaggccc
     4801 ggagcggca
//
LOCUS       DASWKS010000421         4609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_954796, whole genome shotgun sequence.
ACCESSION   DASWKS010000421 DASWKS010000000
VERSION     DASWKS010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4609
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954796"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VGA78_12005"
     CDS             <1..243
                     /locus_tag="VGA78_12005"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX9894643.1"
                     /translation="RTPCPWVTPSGRPRQGWRRWRRKYGGLQVNEARRLKALDEENRQ
                     LKRLVADQALNLQVVKDLLGKKWWPFGRGGRWSPGS"
     gene            complement(365..1624)
                     /locus_tag="VGA78_12010"
     CDS             complement(365..1624)
                     /locus_tag="VGA78_12010"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9894644.1"
                     /translation="MIADPPSAPEAELPGRSLAHVRRFALGRAASVLGWQMVSVAVGW
                     QLYERTGDPWSLGLVGLVELAPVIALLIPAGILVDRVPRRNVAMGAGLLFSLAALGLV
                     VVGRPGVPLAFTYGMLLVVGAARAFQAPALASLLPELAPADRLTTVNAWIAATYEMAA
                     IGGPALAGLLIAATGGATTVFALAAICTLGFVALMATLPSRRPTGSAVPHSAREIFAG
                     FRFIRRTPVYLAAITLDLLAVLLGGAVALLPVYAKDILAVGPAGLGWLRTAPAAGALL
                     MSLVVTRLPPWQRPGRVLLTVVAGFGLATIGFGVSRSFALSLMCLFLVGAFDAVSVVI
                     RMTLEQVLTPDPLRGRVTAIHFLFIGFSNELGAFESGALAAWIGPVWAVAGGGIGTLL
                     VVGAVIAVWPELAKLGPLNKLRPSTEH"
     gene            complement(1638..1710)
                     /locus_tag="VGA78_12015"
     tRNA            complement(1638..1710)
                     /locus_tag="VGA78_12015"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1675..1677),aa:Asn,seq:gtt)
     gene            1846..2286
                     /locus_tag="VGA78_12020"
     CDS             1846..2286
                     /locus_tag="VGA78_12020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894645.1"
                     /translation="MRRYFIGVAAALALGCGGSTDPDHSRGPNPQAVIDVAPPAEITL
                     AIGQSLRLRNPDLQVRFLAVPEDSRCPNNVTCVWAGDARIALAATGAVERAFDLHLPT
                     EQIGSSKVVLGPYEIEAEALEPAPVAGEDRRPEDLRLTLKVRRL"
     gene            complement(2283..4007)
                     /locus_tag="VGA78_12025"
     CDS             complement(2283..4007)
                     /locus_tag="VGA78_12025"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HEX9894646.1"
                     /translation="MRRTTRLRRISWILFAFPALLSAQERLLTVERFDAAIRVDRDGT
                     IHVTESITARFTGSWNGIYRTIPVEYRTPQGFNWTLGLDLQGVTDQNNQPLRTESSRE
                     GHYIKYKIWVPGAENATRVVVLRYRARNGLRFFEDHDELYWNVTGDEWDVPIEAASAV
                     IELPAQAQGVRAISFNGVYGSTAQEAQVETSGTSVRITMPHRLEFQEGLTAVVGWNKG
                     VVAEPTASDRAVGFLRSNWPLAIPIPVFLLVFSIWRKRGRDPRKRPISVRYEPPDGIT
                     PAEAGTLLDNSADMRDITATMVDLAVRGYLKFEERDEPKLFGLLSDKEYYLHRLKLEP
                     EWNTLAPHETKVLRGLFDGRGAVVALSDLEDEFYSELPGIKKQIFERLLGHGFYRARP
                     DNVRSAWVIGGIVLGALLIAGGGSIAGRFSLTPVPFVVAGVLSGLIVLGFGLVMPART
                     EGGTRALEKVLGFEEFLRRVEAEHMEHVMKSPELFDRYLPFAMAFGVEKKWAKAFEDI
                     YTQPPTWYVGPSVTHFNVGRFSSSLSGMTSKVSSTMSSSPRSSGGSGFGGGGSSGGGG
                     GGGGGGGF"
     gene            complement(4004..4555)
                     /locus_tag="VGA78_12030"
     CDS             complement(4004..4555)
                     /locus_tag="VGA78_12030"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX9894647.1"
                     /translation="MGLVLLLGVVLLGYGIFTFNRLTQLRQLGDNAWADIDVQLKRRH
                     DLIPSVVSVVKGHAGYERGTLEAVVEARSRALQASGPAAKAAAENPVEGSLHRIFAIA
                     EAYPELRAVQSFRELQQTLAEIEDHLQNARRYYNAVVRDFNTKTAQFPSNLVAGTMGF
                     RPREFFGIDDASERLVPRVETGA"
BASE COUNT          800 a         1603 c         1506 g          700 t
ORIGIN      
        1 agaacgccat gcccatgggt aacgccttca ggccggcctc ggcaagggtg gcggcggtgg
       61 cggcgcaagt acggcggcct gcaggtcaat gaggcgcggc ggctgaaggc gctggacgag
      121 gagaatcgcc agctcaagcg gctggtggcc gaccaggcgc tcaatctcca agtggtgaag
      181 gacctgctgg gaaaaaagtg gtggccgttc gggcgcggcg ggaggtggtc acctgggtca
      241 tgaggaccgc cggcctgagc gggcgccagt cgtgccgatg tactgagcgg agcgaagaat
      301 ctcgctcgcc cgtcaaatcc ttcgcttcgc tcgggatgac cgcggagaac tcagtactca
      361 gtactcagtg ctcagtactc ggtctcagct tattgagcgg tccaagcttc gcgagttcgg
      421 gccagaccgc gatcaccgcc ccgacaacca ggagcgtacc gatcccgccg ccggccacgg
      481 cccacaccgg accgatccat gccgccaacg ctccgctctc gaacgcgccc agctcgttgg
      541 aaaacccgat gaagagaaag tggatcgcgg tcacccgccc ccgcaggggg tccggcgtga
      601 ggacctgctc cagcgtcatc cggatcacca cgctcactgc gtcgaaggcc cctaccagga
      661 acagacacat caaggacaag gcgaagcttc gggagacccc gaatccgatg gtggccagcc
      721 cgaaccccgc gaccaccgtc agcagcaccc ggccgggccg ctgccaggga gggagccgcg
      781 tcactaccaa tgacatgagg agcgcccccg cggccggtgc ggtgcggagc cagcctagcc
      841 cggccgggcc gaccgccagg atgtccttgg catagaccgg cagcagcgcc accgcgccgc
      901 ctaacagtac ggcgagcaga tccagcgtga tggcggcgag gtagaccggg gtccggcgga
      961 tgaagcggaa accggcgaag atctcccggg cgctatgggg taccgccgag ccggtgggcc
     1021 ggcgggacgg cagggtcgcc atcagggcca cgaaccccag cgtacagatt gccgcgaggg
     1081 cgaagacggt ggtcgcgccg ccggtcgccg caatcagcag gccggccagc gcgggaccgc
     1141 cgatcgcggc catctcgtag gtcgcggcga tccatgcgtt cacggtggtg agccggtcgg
     1201 ccggcgccag ctccggcagc aggctggcca gcgcgggcgc ctggaatgcg cgggcggcac
     1261 ccaccaccag cagcatcccg taggtgaagg cgagtggcac tccggggcgg cctacgacta
     1321 ccaggcccag cgccgccagc gagaagagca acccggcccc cattgccacg ttccggcggg
     1381 ggacccggtc gaccaggatg ccggcgggaa tgagcagggc gatgaccggc gccagctcca
     1441 ccagtcccac cagtcccagt gaccagggat cgccggtgcg ttcgtacagc tgccagccca
     1501 ccgcgaccga caccatctgc cagcccagca ccgaggcggc tcggcccagg gcaaagcgcc
     1561 ggacgtgggc aagcgagcgc cccggaagct cggcctccgg ggcgcttggt gggtcggcaa
     1621 tcatagtctg atgggaactc ccgaggcagg actcgaacct gcgacccgct gattaacagt
     1681 cagctgctct accaactgag ctactcggga aagaccggga aatttcgccg cccgacctcc
     1741 accggtcaag cttgcacgtg acgtttcctg aactccaggg gtctatcttt gggtacgggc
     1801 actgccggat agtgcccagc ccggactctt gtttcaggag gctttgtgcg gcggtacttc
     1861 atcggtgtgg cggcggcgct ggcactgggc tgcggcgggt cgaccgatcc cgatcactcg
     1921 cggggaccca atcctcaagc cgtcatcgac gtggctcccc ccgcggaaat caccctggcc
     1981 atcggccagt cactccggct ccggaacccc gacctgcagg tgcgcttcct ggccgtgccg
     2041 gaagactccc gctgcccaaa caacgtcacc tgcgtctggg ccggtgacgc ccgcatcgcg
     2101 ctggcggcca ccggtgcggt cgaacgggca ttcgacctgc acctgccgac cgagcagatc
     2161 gggagcagca aggtggtgct ggggccttat gagattgaag ccgaggcgct cgaaccggct
     2221 ccggtggccg gggaggatcg gcggcccgag gatctccgcc tgacgctcaa ggtgcgccgg
     2281 ctctagaaac cgccgccacc cccgccaccc cctccgccac ccgacgagcc gcccccgccg
     2341 aaccccgagc cgcccgagct tcgcggcgac gaggacatgg tggagctcac cttgctcgtc
     2401 atcccggaga ggctgctgga gaaccggccc acgttgaagt gggtgacact gggcccgacg
     2461 taccaggtgg gtggctgggt gtagatgtcc tcgaatgcct tggcccactt cttctccacc
     2521 ccgaacgcca tggcgaaggg caggtaccgg tcgaacagct ccgggctctt catcacgtgc
     2581 tccatgtgct cggcctcgac ccgccgcaga aactcttcga accccagcac cttttccagg
     2641 gcgcgcgtcc cgccttccgt gcgggccggc atcaccaagc cgaagccgag cacgatcaga
     2701 cccgacagca ccccggctac cacgaacggc accggcgtga gcgagaaccg cccggcgatc
     2761 gagccaccgc ccgcgatcaa cagcgcgccc aggacgattc caccgatcac ccaggcgctg
     2821 cgcacgttat cgggtcgcgc ccggtaaaag ccgtgcccca gcaaccgctc gaagatctgc
     2881 ttcttgatgc ccgggagctc gctgtagaac tcgtcctcca ggtccgacag cgccaccacg
     2941 gcgccccgtc cgtcgaagag gccccggagg accttggttt catggggcgc gagcgtgttc
     3001 cactccggct ccagcttgag ccggtgcagg taatactcct tgtcgctcag caggccgaac
     3061 agcttgggtt cgtcccgctc ctcgaacttg aggtagcccc gcaccgccag atccaccatc
     3121 gtcgcggtga tgtcacgcat gtcggcggaa ttgtcgagca gggtgccggc ttctgccggg
     3181 gtgatcccgt cgggcggctc ataccgcacc gagatcggcc gctttctcgg atcgcgcccc
     3241 cgcttgcgcc agatcgaaaa gaccagcagg aagaccggga tcggaatcgc gagcggccaa
     3301 ttgcttcgga gaaaccccac cgcgcggtcg gacgcggtcg gctcggccac cacgcccttg
     3361 ttccacccca ccaccgcggt gagtccttcc tgaaactcca gccggtgcgg catggtgatc
     3421 cgcaccgacg tcccgctggt ctcgacctgg gcctcttggg cggtggatcc gtacactccg
     3481 ttgaacgaga tggcgcgcac gccttgcgcc tgggcgggca gctcgatcac cgccgaggcg
     3541 gcctcgatcg gcacgtccca ttcgtccccg gtcacgttcc agtacagctc gtcgtgatcc
     3601 tcgaagaacc ggagcccgtt cctggcccgg taccgcagca ccacgacccg ggtggcgttc
     3661 tccgcgcccg gcacccagat cttgtacttg atgtagtgcc cctcccgact cgattcggtc
     3721 cggagcggct gattgttctg gtcggtgacg ccttgcaggt cgaggcccag ggtccagttg
     3781 aatccctgcg gggtgcggta ctcgaccgga atggtgcggt agatcccgtt ccatgatccg
     3841 gtgaatcgtg cggtgatgga ttcggtcacg tgaatcgtgc cgtcccggtc aacccggatc
     3901 gcggcgtcga accgctcgac ggtgagaagg cgttcctggg ccgagagcag ggcgggaaag
     3961 gcgaacagga tccaggaaat gcggcggagc ctggttgtcc gcctcatgcg ccggtctcca
     4021 cccttggcac cagccgttcc gacgcgtcgt cgatcccgaa gaactcgcgg ggccggaacc
     4081 ccatcgtccc tgccaccagg ttcgagggaa actgcgcagt cttggtgttg aagtcgcgca
     4141 caacggcgtt gtagtagcgc cgggcgttct ggagatggtc ctcgatctcg gccagggtct
     4201 gctgcagctc gcggaagctc tgcaccgccc ggagctcggg ataggcctcc gcgatggcga
     4261 aaatccggtg cagcgaccct tccaccggat tctccgcggc ggccttggcg gcgggaccgc
     4321 tggcctggag cgcccggctc cgggcttcca ccaccgcttc gagggttccc cgctcgtacc
     4381 cggcgtgacc cttcaccacc gacaccaccg atggaatcag gtcgtgccgc cgtttgagct
     4441 ggacgtcgat atcagcccag gcattgtccc ccagctggcg cagctgggtc agccggttga
     4501 acgtgaagat cccatacccc aggagcacga cgcccagcag gaggaccagg cccatgccag
     4561 ctccgatgtt gttcgcggat caaccaatat acgtcgcggg tgaggttgc
//
LOCUS       DASWKS010000422         3675 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1709147, whole genome shotgun sequence.
ACCESSION   DASWKS010000422 DASWKS010000000
VERSION     DASWKS010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3675
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709147"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VGA78_12035"
     CDS             <1..725
                     /locus_tag="VGA78_12035"
                     /inference="COORDINATES: protein motif:HMM:NF014703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX9894648.1"
                     /translation="SSSGHLVLAEAVIGFRPPGLYVEVWLHLATLLSVLVAYWSRIRA
                     LVHGLLTRQHEAWRYAGLLLLASVPAAVAGLFFRDFFERSFESGISLGIQFIITGLIL
                     WLTKPALERATGERIGAGAALAIGVAQALAILPAISRSGTTIATALWLGIAPGPAAEF
                     SFLMSIIAVAGSGLLEARHIPPGTDLLSAGLVVGFVAALVSGIWAIRFLVALLRSRRF
                     HVFAIYCVAIGTFTILWYAVRR"
     gene            722..1300
                     /locus_tag="VGA78_12040"
     CDS             722..1300
                     /locus_tag="VGA78_12040"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX9894649.1"
                     /translation="MMVQWHDSLPSTMDTAHALAARGAPHGTAVAAREQTAGRGRRGR
                     SWHSPRGGLWLSVICRPAEASGMEYLSLRVGLAVADALERLLPGLPRLTVKWPNDLLL
                     GGRKLAGILCEARWESGKPAWVVAAVGLNVSNPIPLELSGQATALAEHLPGAAPEELA
                     DPLARVIAAAASTPGELTQQERDLLVLRGSAP"
     gene            1297..2217
                     /locus_tag="VGA78_12045"
     CDS             1297..2217
                     /locus_tag="VGA78_12045"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX9894650.1"
                     /translation="MTAPVRQLGYRLFGRRLDYLLHLRPAEWPIVAVHAATGAVLAVS
                     LPGLEQFDLRQVLLGIGLWVVCLNGGTLAVNSAFDHDEGDIAYLRAPPDPPPHLFTFG
                     TALMVFGLGAAAALPALYWQAYASCMGLSILYSVPPIRLKSVAGIDWFINMWGFGTLT
                     PFAGWAASGLPISRAGEIVLLGFCPLFAGLYPLTQLYQADEDRRRGDRTLASVLGPRA
                     SLVLSFWAVALAFGLFGWAGLEAGWMDQPDGLLRLGLLLAGAVTWGLVLLPWLKHATQ
                     LTPRSHQRRMYAALVAWAVTDGAVIYGFGR"
     gene            2276..2902
                     /locus_tag="VGA78_12050"
     CDS             2276..2902
                     /locus_tag="VGA78_12050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894651.1"
                     /translation="MTSAVQAHPAADHTELRSVVRGALILGVIQTLLVFGFALASRAL
                     EGTPELLVRSLIVLFGVAITTLLPGILTRPRTVEGIAGAAGIGLAATVVFLVLDIAIL
                     QPLGTYTNRWLEIGGGSNWWYHPVWWMVGTFLPWMGAFALSNQANRSGASPVVVLLLA
                     LVFSGVFGALGVLVGVPLAGWNLATFAVAFLPAIALTAVITGLGTKRA"
     gene            2975..3349
                     /locus_tag="VGA78_12055"
     CDS             2975..3349
                     /locus_tag="VGA78_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894652.1"
                     /translation="MRFLKFVLRFLGWLLTPLVAWAASFFGAWLMALAAPAFDDSSVG
                     LVLAVAGGAIGAISATLLWMRLLRRSPELREVLQVTEEGVPVAAVEELPVEELPVEEL
                     PVKELPVEGGRRGSKGVEEGEL"
     gene            3346..>3675
                     /locus_tag="VGA78_12060"
     CDS             3346..>3675
                     /locus_tag="VGA78_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894653.1"
                     /translation="MRLASCFTLASVLVACGGGQRPEGRTGDTARQTVSPSVRPPDSL
                     ALEAPNGVTVWFTVTRESHDSAGTPCFERALEVRRDTLRAGVPLLYTREAPTLLDSGA
                     MRAVLYNQ"
BASE COUNT          445 a         1223 c         1310 g          697 t
ORIGIN      
        1 tttcctcctc ggggcacctg gtgctggccg aagcggtgat cggcttccgt cctccgggtc
       61 tctatgtcga agtgtggctg catctcgcga cgctgctttc cgtgttggtg gcctactggt
      121 cccggattcg ggcgctggtg cacggcctgc tgacgcgcca gcatgaggcc tggcggtatg
      181 ccggactgct gctactcgcc tcggtgcccg cagccgtggc cgggctgttc tttcgcgatt
      241 tcttcgagcg ctccttcgaa tccggtatca gcctggggat ccagttcatc atcaccgggc
      301 tgatcctctg gctcaccaag ccggctctgg agcgtgcgac cggggagcgg atcggggccg
      361 gcgccgcgtt ggccatcggg gtcgcccagg cgctggcgat cctgccggcc atctcccgct
      421 ccgggaccac catcgcgacg gcgctctggc tgggcatcgc acccgggccg gccgccgagt
      481 tctcgtttct gatgtcgatc atcgccgtgg cgggcagcgg gttgctggaa gcgcgtcaca
      541 taccgcccgg caccgatctg ctctcggccg gcctggtcgt ggggttcgtc gccgccctgg
      601 tttcgggtat ttgggccatt cgctttctgg tcgccctttt gcggagccgg cggtttcacg
      661 tctttgcgat ctactgcgtc gccataggaa ccttcaccat tctctggtac gcggtgcgcc
      721 gatgatggtc cagtggcacg actcccttcc gtccaccatg gacaccgccc acgcgctggc
      781 cgcgcgggga gcaccccacg ggaccgcggt ggccgcccgg gagcagacgg ccgggcgggg
      841 ccggcgaggc cgaagctggc attcgccccg gggcgggctc tggctcagcg tgatctgccg
      901 cccggcggag gccagcggga tggagtactt gagcctgcgg gtgggcctgg cggtggccga
      961 cgcgctggag cggctgctgc ccggcctccc gcggctgacg gtcaaatggc ccaatgacct
     1021 cctgttaggc ggccgcaagc tggccgggat cctgtgcgag gcccgctggg agagcgggaa
     1081 gccggcctgg gtggtcgccg cggtggggct caacgtgagc aacccgatcc cgctcgagct
     1141 gagcggacag gccaccgccc tggccgagca cctgccgggc gccgctcccg aggagctggc
     1201 cgacccgctg gcgcgggtga tcgccgcggc ggccagcacg cccggcgagc tgacccagca
     1261 ggagcgcgac ctgctggtgt tgcgcggcag tgcgccatga cggccccggt gcgccagctc
     1321 ggctatcggc tctttggccg acgcctcgac tacctcctgc acttgcgccc cgcggagtgg
     1381 cccatcgtcg cggtccacgc ggccaccggt gcggtgctcg cggtgtccct gccgggactg
     1441 gagcaattcg acctgcggca ggttctgtta ggcatcgggc tctgggtggt ctgcctgaac
     1501 gggggcacgc tcgcggtcaa ctcggccttc gaccacgacg aaggcgacat cgcctatctc
     1561 cgcgcgcccc ccgacccccc gcctcacctg ttcaccttcg gcaccgcgct gatggtgttc
     1621 gggctgggtg ccgccgcggc gcttcccgct ctctactggc aggcctacgc cagctgtatg
     1681 ggcctttcca ttctctattc ggtgccgccc atccggctca agtcggtggc cgggatcgac
     1741 tggttcatca acatgtgggg cttcggcacc ttgacgccgt tcgccggctg ggcggcgagc
     1801 ggcctgccca tcagccgggc cggcgagatc gtcctgttgg ggttctgtcc gttgtttgcc
     1861 gggctctacc ccctgactca gctctaccag gccgacgaag accggcgccg gggcgaccgc
     1921 accctggcca gcgtgctggg ccctcgggcc agtctggtgc tctcgttctg ggcggtggcg
     1981 ctggcattcg gactcttcgg ctgggccggg ctcgaagcgg gctggatgga tcagcccgat
     2041 gggctgctgc ggctgggttt gctgctcgcc ggtgctgtca cgtggggcct ggtgctgctg
     2101 ccctggctca agcatgctac ccagctcact ccccggtcgc accagcgccg gatgtacgcg
     2161 gccctggttg cctgggcggt caccgatggg gcggtgatct acgggtttgg acggtagggg
     2221 tgagtaacta gttttcacgc cgatccccat atcccatgtc gtctgggaga gattgatgac
     2281 tagtgcggtg caggcccacc ccgctgccga ccataccgag ctccggtccg tagtgcgcgg
     2341 cgcgctcatc ctgggtgtga tccagaccct gctcgtgttc gggttcgcgc tggcatcccg
     2401 ggcgctggag ggcactcccg agctgctggt ccggagcctg atcgtgctgt tcggcgtcgc
     2461 catcaccacc ctgctgcccg gcatcctgac ccggccgcgc accgtcgagg gcatcgcggg
     2521 cgcggccggg atcggcctgg cggcgaccgt ggtgttcctg gtgctcgaca tcgccattct
     2581 ccagccgctc gggacctata ccaatcgttg gctcgagatc ggcggcggaa gcaactggtg
     2641 gtatcacccg gtctggtgga tggtgggaac cttcctcccg tggatgggcg cgttcgccct
     2701 ctccaatcag gccaatcgga gcggagccag cccggtggtg gtgctgctgc tggccctggt
     2761 tttcagcggg gtgttcgggg cactgggagt gctggtcggg gttccgctgg cgggctggaa
     2821 tctggcgacc ttcgcggtcg cgttcctgcc ggccatcgcg ctgacggcgg tgatcacggg
     2881 gttggggacc aagcgggcgt gagggtcctg gttccgggtt ccagatgcct gagacgctgg
     2941 gaggcgggat cttctcgagg ctccggatga ggacgtgcgg ttcctgaaat tcgtcctccg
     3001 attcctgggc tggctgctca cgccactcgt cgcgtgggca gcttcgtttt tcggggcctg
     3061 gttgatggca ctggcggcgc cggccttcga cgacagctcg gtgggattgg tcctggcggt
     3121 ggccgggggc gccatcggag cgatctccgc caccctgctc tggatgcgat tgctgcgccg
     3181 ctcccccgag ctgcgcgaag ttctgcaagt gaccgaggag ggggtcccgg tggcggcggt
     3241 cgaagaacta ccggtcgaag aactgccggt cgaagaactg ccggtcaaag aactgccggt
     3301 cgaaggcggt cgaagggggt cgaagggggt cgaggagggt gagctgtgag gctggcttcg
     3361 tgtttcacgc tggccagcgt gctcgtggcc tgcggcggtg gccagcgacc ggaaggcaga
     3421 accggagata ccgcccgtca gaccgtcagt ccgtctgtcc gtccgccgga cagcctcgcg
     3481 ctcgaggcgc ctaacggcgt gaccgtctgg ttcaccgtga cccgcgaatc ccacgactcg
     3541 gccggcactc cgtgtttcga acgcgcgctc gaagtccggc gggacaccct gcgggcaggg
     3601 gtgccactcc tgtatacccg ggaggcaccc acgttgctcg attcgggagc gatgcgcgcg
     3661 gtcctgtaca accaa
//
LOCUS       DASWKS010000423         3205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1711133, whole genome shotgun sequence.
ACCESSION   DASWKS010000423 DASWKS010000000
VERSION     DASWKS010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711133"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VGA78_12065"
     CDS             <1..279
                     /locus_tag="VGA78_12065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894654.1"
                     /translation="ALWAVGSYLLTQFLVRALNLSGALAIRLLAAFAFALYYWFAAAV
                     VSDHLGLPVWASTVIRGAALLLTAVWLGRADRSSPGRGLRGARSLRLP"
     gene            complement(276..2948)
                     /locus_tag="VGA78_12070"
     CDS             complement(276..2948)
                     /locus_tag="VGA78_12070"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9894655.1"
                     /translation="MNRSRSLPGLAWLLATLASPVFAQTTSPPAGTRVAPRDESPIAA
                     AKALLATDGYIRPPDEIARLVTAPRHLNVALTQLSPDRRWFLREKHAGMPSVTSFGKF
                     RHYFAGLQVDPKANRARVLTTRGASGLELIEATTSQARPIETPAGATISNPVWSPDGK
                     QLAFIANLEAASYAFVADVATGKSRRVTRTPLLATLVTAVNWTADGKSLIAVLVPEGR
                     SAEPKRPEIATGPLIRLWTDTLESSQRNYASLLQEPFDQELMQYYVTGQLALIDVRSR
                     AVTKVGGPAMISGVDPSPDGRWLRITRLERPFSYVVQYGNFASVDEIWEPSGNVVAVV
                     NRLPVREVTDTASRVARALRDSAKRSIAWLPDGGGIHYFENVPRRRADTSDTPSTGQG
                     SGQSGRAERLVQWRAPFGPDDRKVLFQSEGPIGDVAFSPDGKTIFVARSRNNTGEILA
                     LPAGDTAAALRRTLARLRNWAPSFAVLGGRPQGFGGGRGGTPGDSLSFYLNPGSLALR
                     PFAGTRVVILSGDTAAFLVGTRYSREWQTQGPREFLDRVSLANGSKTRIYESPADVSV
                     DVTTLLDDEFTRGVITRQSATEHPNYQLVDFRSGAATPLTRNTDRAAEFTRLSRKRVW
                     VTRADGVKFLVKLTLPADYQPGTRLPGMLWLYPYEYTSQADYDRSLRTEDINQYPASQ
                     PRTIEFLATQGYAVANFNPPIIGDQGRMNDSYIPDLRMNLLAVIDELERQGYVDRSRM
                     AIGGHSYGAFSTVNAMVHTPFFKAGIAGDGMYNRTLTPTGFQSERRNLWSGQRTYLEM
                     SPMLYAERLQGALLLYHMMEDQNVGTDPISSIRMMQALRAHGKVASLFLYPYEDHGPL
                     TQETVLDLWGRWTAWLDIYVKNAGTKPPEKVTEN"
BASE COUNT          498 a         1031 c         1107 g          569 t
ORIGIN      
        1 gccctgtggg cggtgggaag ctacctgctg acccagttcc tggttcgggc cttgaatctg
       61 agcggggccc tcgcgatccg gctcctcgcc gcgttcgcat tcgccctgta ttactggttc
      121 gcggccgcag tcgtctcgga ccacctgggc cttccggtgt gggcctcaac ggtcattcgg
      181 ggagccgcac tccttctcac ggcggtctgg ctcggccggg ccgatcggtc gtcaccagga
      241 agaggactcc gtggagcccg ctccctccgc ctgccctagt tctccgtcac cttctccggt
      301 ggtttggtcc ccgcgttctt cacgtagatg tcgagccacg cggtccaccg gccccagaga
      361 tcgagaaccg tctcctgagt cagcggtccg tgatcctcat agggatacag gaagagcgac
      421 gcgaccttgc catgcgcccg gagcgcctgc atcatgcgga tcgagctgat gggatcggtt
      481 ccgacgttct gatcttccat catgtggtac agcaacagcg cgccctgcag ccgctcggcg
      541 tacagcatag gcgacatttc caggtaggtc cgctgcccgc tccagagatt gcgccgctcg
      601 ctctggaagc cggtgggcgt caaggtccgg ttgtacatcc cgtcgcccgc gatccccgcc
      661 ttgaagaacg gcgtatgcac catcgcgttc accgtgctga acgcgccgta gctgtgcccc
      721 ccgatggcca tccggctccg gtcgacgtag ccctgccgct ccagctcgtc gatcacggcc
      781 aggaggttca tgcgcaggtc cgggatgtaa ctgtcgttca tccggccctg gtcgccgatg
      841 atcggcgggt tgaaattcgc cacggcgtag ccctgggtgg cgaggaactc gatggtccgg
      901 ggctggctgg ccggatactg attgatatcc tcggtgcgga ggcttcggtc gtagtcggcc
      961 tggctggtgt actcgtaggg atagagccag agcataccgg gcagcctggt tcccggctgg
     1021 tagtcggccg ggagggtcag cttcaccagg aacttgaccc cgtcggctct tgtcacccac
     1081 acccgcttgc ggctgagccg ggtgaattcg gcggcccgat cggtattccg ggtcagtggg
     1141 gtggcagcgc cgctcctgaa atcgaccagc tggtagttgg gatgctcggt ggccgactgg
     1201 cgggtgatga ccccgcgggt gaactcgtca tcgaggagtg tggtcacatc aaccgagacg
     1261 tcggcggggc tttcgtatat cctggtcttg cttccattgg cgaggctgac ccggtcgagg
     1321 aactcgcgcg gcccctgggt ctgccactcg cgggagtagc gcgtccccac caggaaggcg
     1381 gcggtatccc ccgagaggat caccacccgc gtgccggcaa agggcctgag ggccagcgag
     1441 ccgggattca ggtagaagct gagcgaatcg cccggggtgc cgccccggcc gccgccgaag
     1501 ccctgggggc ggccgcctaa cacggcgaag ctgggtgccc agttccgcag acgcgccagg
     1561 gttcgccgca gggcggcggc ggtatcgccg gcggggaggg cgaggatctc gccggtattg
     1621 ttgcggctcc gggccacgaa aatagtcttg ccgtcggggc tgaaggcgac gtcaccgatc
     1681 gggccttcac tctggaacag caccttcctg tcatccggcc cgaagggtgc cctccactgc
     1741 accagccgct cggctcggcc cgactgcccg ctgccctggc cggtcgacgg cgtgtcgctg
     1801 gtatcggccc ggcggcgggg aacgttctcg aagtagtgga tgccgccgcc gtcaggcagc
     1861 caggcaatgc tgcgcttggc gctgtcgcgc agggcccggg ccacccggct ggcggtgtcc
     1921 gtcacctcgc ggaccggcag ccggttcacg acggccacca cgttgccgga cggctcccag
     1981 atctcgtcga cgctcgcgaa gttgccgtac tgcaccacgt agctgaaggg gcgctccagc
     2041 cgagtgatgc gaagccagcg gccgtcgggg gaaggatcca ccccgctgat catggccggc
     2101 ccgcccactt tggtcaccgc gcgcgagcgt acgtcgatca gggccagctg gccggtgacg
     2161 tagtactgca tcaactcctg atcgaagggc tcctggagca gactggcgta gttccgctgg
     2221 gacgactcga gcgtgtcggt ccagagccga atcagcggcc cggtggcgat ctccggccgc
     2281 ttgggttcgg cggagcgacc ctcggggacc agcacggcga tgaggctctt gccgtcggcc
     2341 gtccagttca ccgcagtgac cagggtggcc agcagtggtg tgcgggtgac ccgtcgggac
     2401 ttgccggtgg cgacatcggc aacgaacgcg taagatgcgg cctccaggtt ggcgatgaag
     2461 gccagctgct tgccgtcggg ggaccagacc ggattgctga tcgtggcgcc ggccggggtc
     2521 tcgatcggcc tcgcttggct ggtggtggcc tcgatcagct cgagcccgct cgcccctcgg
     2581 gtggtgagta cacgggcccg attggctttg ggatcgactt gcagtcccgc gaagtagtga
     2641 cgaaacttgc cgaagctggt gacgctgggc attcctgcat gcttctcccg caggaaccag
     2701 cgccgatcgg gactcagctg ggtcagggcc acgttgagat ggcgtggtgc ggtcaccagc
     2761 cgagcgatct cgtcgggcgg ccggatgtac ccgtcggtgg ccagcagcgc cttggccgca
     2821 gcgatcggcg actcatcgcg gggggccacg cgagtgccgg ccggcgggga ggtggtctgg
     2881 gcgaaaaccg gcgacgcgag cgtggcgagg agccacgcca gacccgggag tgaacggctg
     2941 cggttcatgt tgacctcgga acggagctgg gcagaaggtc ggctggaccg gtcgcaccga
     3001 cattccaaga tacgcaccag cctgggagtc tgctgaaccc gctcccgaga ccacaaacca
     3061 tatccacgga ttacacggat tacccagatt accaacagct tcagcggttg gcgacgaatc
     3121 cgtgtaatca ggtgaatccg tgtaatccgt ggataagtat cactatcaag gcccaaggcc
     3181 gccgggattc actccggggg cggta
//
LOCUS       DASWKS010000424        12347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2083081, whole genome shotgun sequence.
ACCESSION   DASWKS010000424 DASWKS010000000
VERSION     DASWKS010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083081"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..2274
                     /locus_tag="VGA78_12075"
     CDS             196..2274
                     /locus_tag="VGA78_12075"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9894656.1"
                     /translation="MKRMVSAGLLATLLVAGHSLAAQQAFTLEQVLSAPFPTSLVSAK
                     TGAVAWVFNARGRRNIWLAEPPGYQARQVTDYALDDGQDLSALQFTPDGGSIVFVRGG
                     APNSRGDIPNPSSDPAGADRAIWIVRVSGGPPRKLAVGAGPVLSPQGREVAYLGAGTV
                     WTIGVDSGATPKAVVRARGGQGSLRWSPDESRLAFVSGRGSHSFVGVYDFASKSIRWM
                     DPGVDQDIEPVWSPDGRQLAFGRIPAEFTPKLFVAEREGEPWSIRVADVMTGRSREVF
                     RAPRGRGSVFRGIVGNQVFWTADGFLVFPWEREGWTHLYAIPATGGEPRLLTPGAGEV
                     EHVSLAPDARSLVYASNHSDISRRDLWQVVPGGGAPRPLTTGTFIEWSPVLTGDGRSV
                     AFLRSDARGPARPALMPVGGGTARDLGTIPAEFPAAKLVEPQVVSFDAADGMKIPAQL
                     FLPAGMAAGERRPAVIFFHGGSRRQMLPGWNYGEYYHNAYAMNQYLASRGYVVLSVNY
                     RSGIGYGMEFREALDYGAGGASEFNDVLGAGLYLKGRPDVDGSKIGLWGGSYGGFLTA
                     MGLSRASHLFVAGVDLHGVHDWNNGIRNFVPAYDPLKRVDAARLALQSSPMSTLDGWT
                     SPVLLIHGDDDRNVAFTETGSLVEQLRKRGVEHEVLVFPDEVHGFLRHATWLAAYTAT
                     ADFFRRKLGR"
     gene            complement(2372..3109)
                     /locus_tag="VGA78_12080"
     CDS             complement(2372..3109)
                     /locus_tag="VGA78_12080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894657.1"
                     /translation="MSDPIRRELRLLKGYAVVVTILLGTLSLAAFQQASQKTRFTEID
                     VERINVVEPDGKLRMVISNRPRSIGPIYQGKPFGYPGGTRPGIIFFNDEGTENGGLTF
                     TGRRNEDGTYSSSTGMSFDQFNQDEVLTLRYSDNNGRRSTGITIADRAPVDIYDMIVE
                     RDSINRMPDGPAKTAALERWAAPRDGVPLRATRVYMGRDQSKAAVLNLADPMGRPRLR
                     LRVDSLGAASVEFLDERGTVTGKIPQN"
     gene            3524..3799
                     /locus_tag="VGA78_12085"
     CDS             3524..3799
                     /locus_tag="VGA78_12085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894658.1"
                     /translation="MTCVTRSGNQAWVGGIVDRVVTDNPAFETLQGLEMWWRSIDNGE
                     EATSPPDVTTGVGFGFPGSTITAESWCRDQPVALVAREVENGNIQVR"
     gene            3883..4152
                     /locus_tag="VGA78_12090"
     CDS             3883..4152
                     /locus_tag="VGA78_12090"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9894659.1"
                     /translation="MAATFADLGLAPALVEALTGLGYEEPTPFQREAIPPLLAGRDLL
                     GQAATGTGKTVAFALPLLQRLPPASPARPVLDCWCWFPPASWPCR"
     gene            4116..4640
                     /locus_tag="VGA78_12095"
     CDS             4116..4640
                     /locus_tag="VGA78_12095"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX9894660.1"
                     /translation="MLVPTRELAMQVAEAIHRYGRVREASVVPICVTAAGTLPRVRQT
                     AYLLSRAHKVAGLVRILDHEAPTLALRGLDIERLSHVVNFNVPESPDAYVHRIGRTGR
                     AGRKGSTRRLDLTRAAMRDMILVGELDGHRVVVEALADEFDLMDIATAAVKLAHESGA
                     GAGEAGDIEVPVPR"
     gene            4752..5183
                     /locus_tag="VGA78_12100"
     CDS             4752..5183
                     /locus_tag="VGA78_12100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894661.1"
                     /translation="MRGPAPHSAEEASRKELGWASLRLCLMLVSLALLVVPLLRELPL
                     GKTTRTGMLAWLLVALAFYWIYAGLGYRPLLLLQLLTFSTAATLLTTKAMLVLVGIDR
                     LSILRRTARSLILVGAALAALNLGFMLLGLLRRRPPRPTLT"
     gene            complement(5205..5972)
                     /locus_tag="VGA78_12105"
     CDS             complement(5205..5972)
                     /locus_tag="VGA78_12105"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX9894662.1"
                     /translation="MVCLKLPAAIAALLLVGGDLAAQETKPPAPLGHVVRWSDVAVAV
                     GGVGVLMLVDEPLQRFAQRNRTSATDDIAGIFRTGGEPPIYAGIGLGVLGVGFVTGKA
                     GVRRAGSRLVAAVLLSAGEMSLMKRLVGRSRPNEQVGAFAFHPITSLDDSAGIEARGS
                     MPSGHVTAAFAVATSLADDIRKPLVKVLLYAAASGTAFSRINDNRHWISDTAMGAVLG
                     IFTAKVVNGHWRIFGLRSPGFLVTPSGAAVVAWQAMF"
     gene            complement(5995..8061)
                     /locus_tag="VGA78_12110"
     CDS             complement(5995..8061)
                     /locus_tag="VGA78_12110"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX9894663.1"
                     /translation="MIGPLRPAVGLIATLICGVTPARGQTTTPERLPERAIRRNIPIT
                     NAIRRAYAAGTRDSTGRPGRNYWQLRTDYTIHAVLDVGASRITGRETIVIHNTSPDSL
                     RNIVLRLDPNLFLGFTPHAAPWVPAELTDGMVVTRLTLNGRSVNLAPGREPRGAETVS
                     EPSAFGLRLTSTRIALSQPIQAGATARLEVDWNHKLPGGPGNGHRMTQRWADTLYQPT
                     QWYPRVAVYDDLRGWDADLYLGPSEFYNNFGRFDVRIDVPAGWIVSGTGELQNPEEVL
                     TPRARERLAKALGSDSITTIVGPDETGPGQATATPATGDRLVWHFVADSVNDFAWATA
                     RKYVWQTLRATIPGKGAVPIHMLFLPGRANLYANAGRITRHALEFYSKLWFPYPFPQL
                     TLQDGPSAGMEYPMVINSNQGAADHEAAHQWWPMTVSNNETWYGWMDEGFNQYMNILS
                     AADVGGRAADRDLDRLGQSYGLTSGNEAEPPMMWNANYGGSQFYGFTTYTKTPLMLSM
                     LGGIVGDSAVQRAHREWAIAWMYKHPSPWDWMFFMNRALKQDLGWFWYYWLFTTESVD
                     GSIEQVTTRGTKTVVTVRQDGQMPSPVVLRVTFAPTGPAIRRMRNAVVQDSVTALVTH
                     PVDAWFSGSRTFTAELDFGGRMITQLWLDPYCRFPDRNLGDNVWPRVDARQIASLALQ
                     PGVCRR"
     gene            8240..9907
                     /locus_tag="VGA78_12115"
     CDS             8240..9907
                     /locus_tag="VGA78_12115"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX9894664.1"
                     /translation="MPVSDLARLSQRPGVVGAGLLVATLVLAGALGLEATRSAASHRA
                     AVERTLQDYAAIAAWQFARQGRIWLGFGMNQAGAQIDRELPDPKRGSLPGPELLRRVL
                     AEKECDCMSAGFARTAFRATFGPEPRLLEDGEPFTPAARASLLALLAADSVPREGPRR
                     WRILPPGEPGLHRPDDVILLWKVVRRVGQDPELLEAVYGMVVEVAQIRRPLLGAVGDT
                     EFLPPSLIRGARTDSVVRLAVAGPGRPPLLETAPGAPAYAGADTLGWLYGNLNVTAEI
                     RPAAAALLVAGGLPTPRGRQLAALLVVTLAVGGAALLLLRREQQVARLRDDFVSGVSH
                     ELRTPLTQIRILSELLQGEGFRADEERARAVSIIHREALRLTNLVDNVLQFARLRRRP
                     APPAAAPVVLADVVAEVVEAFHPMLDASGNQVILELPDGLEAIGDRDAVARILRNLLE
                     NAVKYGPQGQTVRVAVARTGGVARLSVEDQGPGIPAADRSRIWRPYQRLERDRNASVG
                     GSGLGLSVVAELTALLGGRAWVEDAAPGGARFVVELPAAVGRDGGAA"
     gene            9904..10590
                     /locus_tag="VGA78_12120"
     CDS             9904..10590
                     /locus_tag="VGA78_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9894665.1"
                     /translation="MTQILVIEDNLDLAFGLETALENEGFGVEIAPDGKAGLQRALKG
                     GIDLMVLDLMLPGLDGYRVLRALRNEGIEIPVLVLTAKGEESNKVQAFSIGADDYVTK
                     PFGTLELIARVRALLRRAGRRDGPALPSIERFGEIEVNPASRTVYRAGQAVGLTPREF
                     DLLLALLKRRGAVGSRVELLREVWGYQAEVMSRTVDMHVAELRRKLEPDPTAPRHILT
                     VWKVGYRLER"
     gene            10696..11952
                     /locus_tag="VGA78_12125"
     CDS             10696..11952
                     /locus_tag="VGA78_12125"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEX9894666.1"
                     /translation="MSGTVAPNLATPAMAREPAARDLAPARPRMLSIDILRGAVMVLM
                     AIDHVRVFLSAEPLANLSRISASLFLTRWVTHFCAPVFLFLAGTAAFFYGRRVQETGR
                     LARFLVTRGLWLVLMELTLVRLGWTFNFRYDQLLMAGVIWAIGICLILMAALVYLPRP
                     AIALVGFAIVAGHNLLDPVAQTMRQSLSGSDLGWLWQVLYFGGPIQLGTGGPVLAVLY
                     SIVPWIGVMALGYALGTVLELPPARRRQLCLRIGLGAVAAFLIIRGFNLYGNPRPWSP
                     AQRAPLFAAFSFIDTNKYPASLLFLLMTLGPAIALIPALERVRGRLADALSLFGRVPF
                     FYYLLHLPLIHGIAVVLAFARHGRVDPWLFGNHPIGVPPTPAGLGYGVPVLLLTTLVT
                     VVLLYFPCRWFAAIKSRRRESWLSLL"
     gene            11977..>12347
                     /locus_tag="VGA78_12130"
     CDS             11977..>12347
                     /locus_tag="VGA78_12130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894667.1"
                     /translation="MLTLSLTWMLVSTAVSPAGPALGVERLADDTSLASLYAAREKAW
                     RDYFANSPDLARTLPADFVGIEAGDSLWDDLAETLAAAKASASRGIRLTALRFPRNRV
                     ERYGNVAVIHSRYEAELEGPDG"
BASE COUNT         1856 a         4020 c         4305 g         2166 t
ORIGIN      
        1 cgctcgggat cctggtatcc tacctcccca tcacactggc catctcgcat gtggcccagc
       61 ggactcgaaa cacctggccg gggatcatcg gccacatggt ggccaacagc ggaatcccgc
      121 tgctgatgct gagtcgtctg ctggcgaagt gaagcgtctc gccctatcac gaaatccgaa
      181 ccgggagtct cacgcatgaa gcggatggtc tcggctgggc tgctggcgac cctgctggtt
      241 gccggtcact ccctggccgc ccagcaggcg ttcacgctgg aacaggtgct ctcggcgccg
      301 ttcccgacct cgctggtcag cgcgaagacc ggggccgtcg cctgggtgtt caacgcccgg
      361 ggtcggcgga acatctggct ggccgagcca ccgggttacc aggcccggca ggtcaccgat
      421 tatgcgctgg acgacggcca ggatctctcg gccctgcagt tcacgccgga cggcgggtcg
      481 atcgtcttcg ttcggggcgg agcgcctaac agccggggtg acattcccaa cccgagcagc
      541 gatccggccg gcgccgatcg cgcgatctgg attgtccggg tctcgggtgg gccgccgcgg
      601 aagctggcgg tgggcgcggg accggtgctg tcgccccagg gcagggaggt ggcgtacctc
      661 ggcgcgggca cggtctggac catcggggtg gattcgggtg ccacgcccaa ggcggtggtc
      721 cgggcccgcg gtggacaggg atcgctccgg tggtcacccg acgagtcgag gctggccttc
      781 gtgagcggac gcggctcaca ctcgttcgtg ggtgtctacg acttcgcctc gaagtcgatc
      841 cgctggatgg accccggggt ggaccaggac atcgagccgg tctggtcgcc ggatggacgc
      901 cagctcgcgt tcggccgcat tccggccgag ttcacgccca agctgtttgt cgccgagcgg
      961 gaaggagagc cgtggtcgat ccgggtcgcg gatgtcatga cgggcagatc gcgcgaggtg
     1021 ttccgcgccc cccgggggcg ggggagtgta ttccgcggaa tcgtggggaa ccaggtgttc
     1081 tggaccgccg atgggttcct ggtctttccc tgggagcggg agggatggac ccatctctac
     1141 gccattcctg cgaccggagg tgagcctcgg ctgctgactc cgggagcggg agaggtggag
     1201 cacgtttccc tcgcgcctga tgcgcgatcg ctggtgtacg cgtccaacca cagcgatatc
     1261 agccgccgcg atctgtggca ggtggtaccg ggaggcgggg caccccggcc actcacgacc
     1321 ggaaccttca tcgaatggtc cccggtgctg acgggcgacg gccgttcggt ggcgttcctg
     1381 cgatccgacg cgcggggccc ggcccggccc gccctgatgc cggtcggcgg gggcacggca
     1441 cgcgacctgg ggaccatccc ggccgagttc cccgcggcga aactggtcga acctcaggtc
     1501 gtgagcttcg acgccgccga cggcatgaag atcccggccc agctctttct gccggccggt
     1561 atggcggccg gcgaacgccg gccggccgtg atcttctttc atggtggctc gcgccgccag
     1621 atgctgccgg gctggaacta cggcgagtac tatcacaacg cctatgccat gaaccagtac
     1681 ctcgccagcc gcgggtacgt ggtgctgtcg gtgaactatc gcagcggcat cgggtacggc
     1741 atggaattcc gcgaggcgct cgactacggt gctggcggcg ccagcgaatt caatgacgtg
     1801 ctgggcgccg ggctctatct gaagggccgc cccgacgtgg atgggtcgaa gatcgggctc
     1861 tggggcggat cctatggtgg gttcctgacc gcgatgggat tgtcgcgggc ctcgcacctg
     1921 ttcgtggcgg gggtggacct ccatggcgtg cacgactgga acaacggcat tcgtaacttc
     1981 gtcccggcct acgacccgct caaacgggtc gacgcagccc ggttggcact ccagtcttca
     2041 cccatgtcga ccctcgatgg gtggacgtca ccggtgctgc tgatccacgg cgatgacgac
     2101 cgcaatgtgg cgttcaccga gaccggcagc ctggtggaac agctccggaa gcgcggcgtg
     2161 gaacacgagg tcctggtgtt ccccgacgag gtgcatggct tcctgcggca cgccacctgg
     2221 ctcgcggcgt acacggcgac cgccgacttc ttccggcgca agctcgggag atagatcctc
     2281 cgctgcggga aaaccgtcga agaccgtcga agacggtcga aagggtcgaa ggggtcgaag
     2341 acgaacgcgt ggtcgtcatc ctgagcaact gtcagttttg cggtattttc cccgtgacag
     2401 tgcccctttc gtccaggaat tccaccgagg cggcgcctaa cgaatcgacc ctgagccgca
     2461 ggcggggccg gcccatcggg tccgccagat tgagcaccgc cgccttgctc tggtcccggc
     2521 ccatgtaaac ccgcgtcgcc cggaggggta ccccatcgcg cggagcggcc cagcgctcca
     2581 gcgcggcggt tttggccggc ccgtccggca tccggttgat cgagtcgcgt tccacaatca
     2641 tgtcgtagat gtccaccggt gcccggtcgg cgatggtaat gccggtgctg cggcggccgt
     2701 tgttgtcgct gtagcgcagc gtgagcactt cgtcctggtt gaactggtcg aaggacattc
     2761 cggtcgagga gctgtaggtc ccgtcctcat tgcggcggcc ggtgaaggtg agcccgccgt
     2821 tctcggtgcc ctcgtcgttg aagaagatga tgccgggacg ggtcccgcca ggatacccaa
     2881 acggcttccc ctggtagatg gggccgatcg agcggggccg gttggaaatc accatccgca
     2941 gcttcccatc cggctcgacg acgttgatcc gctccacgtc gatctcggtg aagcgggtct
     3001 tctgcgaggc ctgctgaaag gcggccagag acagggtgcc caggaggatg gtcaccacca
     3061 cggcgtagcc cttgagcagg cggagctcac ggcgaatcgg gtcggacatc gaaggctcct
     3121 cggagcgggg atcggtggga gaatgtagcc taggatcggg tggccaggat cctcgccagc
     3181 cgttcgcgtc cgctccggct gagcttgcat cggccgccgc cttccagcac cgccacgcac
     3241 tcgcccagcc gggaccgcct gatctcacgt acctgcgcca ggttgacgat ggctgagcgg
     3301 tggacccgga caaagcgacc agggtccagt cgctcctcca accggccgat gggcggagct
     3361 cggcccgccg agcggaaagg gattgatggc ttcggtcggg gcctgcgcca cggcgtgacc
     3421 ggaagcggcc acctccttca ccgcgatcgg ctacgacgat ggctccgcca gcggtcagta
     3481 tcagtacgat ttccgcgcga atggattctc gattcatggt ccggtgacgt gcgtcacccg
     3541 ttcaggcaac caggcgtggg tcggcggcat cgtcgatcgg gtcgttaccg acaacccggc
     3601 gttcgagacg cttcagggac tcgagatgtg gtggcggagc atcgacaacg gtgaagaggc
     3661 cacctcgccc cctgacgtga cgaccggcgt cggtttcggg tttcccggct cgacgatcac
     3721 cgcggagagc tggtgccgag accaaccggt ggccctggtg gcccgagagg tcgagaacgg
     3781 caatatccag gtcagatagc agactattct gactgaggga gcaggtcgaa ggacctggta
     3841 ctcgcgggcc gcttcagggc ggctcgcggc tatattggcg gtatggcggc aacgttcgcg
     3901 gacctgggcc ttgctcccgc gctcgttgaa gcgctgactg gtctggggta cgaagagcct
     3961 acgccgttcc agcgcgaagc gattccgccc ctgctggccg gtcgcgacct tttggggcag
     4021 gcggccaccg gtaccggcaa gaccgtcgcc tttgcgctgc cgctgctgca acggctcccg
     4081 ccggcaagcc ccgcccgtcc cgtcctcgat tgctggtgct ggttcccacc cgcgagctgg
     4141 ccatgcaggt agccgaggcg atccaccgtt acggccgggt ccgggaggcc agcgtagtcc
     4201 ccatctgcgt gaccgcggcc gggacactgc cgcgggtgcg gcagaccgcc tatctgctgt
     4261 cgcgagccca caaggtcgcg gggctggttc gaatcctcga ccatgaggcg ccgacccttg
     4321 cactcagggg cctcgacatc gagcggctca gtcatgtcgt aaacttcaac gtgcccgagt
     4381 cgcccgatgc ctacgtgcac cggatcggac gaaccgggcg ggccggaagg aaggggtcga
     4441 cccgccggct ggaccttacc cgcgcggcta tgcgggatat gatccttgtg ggcgaattgg
     4501 acgggcaccg ggtggtagtc gaggctctag ccgacgagtt cgatctgatg gacattgcca
     4561 cggcggcggt gaagctggct catgagagcg gggcgggtgc cggtgaggct ggcgacatcg
     4621 aggttcccgt tccgcggtga tggcccgggt ctatatcgcc gccatcctcg cgcttcgggc
     4681 ggcgcgggtg aaaggaaagc gtctgaccgt gaggcgggac caagcgagac gagggaggga
     4741 gtagccgcgc catgcgaggc ccggcaccac attccgccga agaggccagc cggaaagagc
     4801 tggggtgggc cagtctgcgg ctttgcctga tgctggtctc gctggccctt ttggtcgtac
     4861 ccctgctgcg cgaattgccc ttgggcaaga ccacccggac cggcatgctg gcgtggctgc
     4921 tggtggcgct cgcgttctac tggatctacg ccggtctggg ttatcgcccg ctgttgttgc
     4981 tgcagttgct gacgttctcg accgccgcga cgctgctcac caccaaagcg atgctggtgc
     5041 tggtgggcat cgaccggttg agcattctgc gccgcaccgc ccgcagcctc attctggtag
     5101 gcgcggccct cgccgccctc aatcttgggt tcatgttgct gggactgctg cggcggcgtc
     5161 cgccccgacc gaccctgacg tgagacgtgc ggcccgatcc cgggtcagaa catcgcctgc
     5221 cacgccacaa ccgccgctcc gctcggggtg acgagaaacc cgggtgagcg cagcccgaag
     5281 attcgccaat ggccgttgac gaccttggcc gtgaagatgc ccagcaccgc acccatcgcg
     5341 gtgtcgctga tccagtggcg gttgtcgttg atgcgggaaa atgcggtgcc actggccgcg
     5401 gcatagagca acaccttcac cagtggcttc ctgatgtcgt cggccaggga ggtcgcgacc
     5461 gcgaacgcgg cggtgacgtg accggaaggc atcgagcccc gagcctcgat cccggcggag
     5521 tcgtcgaggg aggtgatggg gtggaaggcg aacgcgccga cctgctcgtt ggggcgggaa
     5581 cggcccacca ggcgcttcat cagcgacatc tcgccggccg agagcagcac ggccgccacc
     5641 aggcggctcc cggcccgacg gacgccggcc ttgccggtca cgaatcctac tccgagtacc
     5701 ccgagaccga tcccggcgta gatcggtggc tccccgccgg tgcggaagat tccggcgatg
     5761 tcatcggtgg cgctggtgcg gttccgctgg gcgaacctct ggagcggttc gtccaccagc
     5821 atgagcacgc ccacgccacc gaccgcgacc gccacatcgg accagcgcac cacgtgtccc
     5881 aggggcgccg gcggcttggt ctcctgagcc gccaggtcgc cgcccaccag gagcagcgcg
     5941 gcgatggcgg cggggagctt caagcagacc atgtcgaccg ccctccaacc ttggctaacg
     6001 gcggcagacc cccggctgca gcgcaagcga ggcgatctgc cgagcgtcca cccggggcca
     6061 cacgttgtcg ccgaggttcc ggtcgggaaa gcgacagtaa gggtcgagcc acaattgggt
     6121 tatcatccgc ccgccgaagt cgagctcggc cgtgaaagtg cggcttccgg aaaaccaggc
     6181 gtcaaccggg tgggtgacga gtgccgttac actgtcctgc acgacggcat tccgcatccg
     6241 acggatggcc ggtccggtgg gcgcaaatgt cacccgcagg accaccggcg agggcatctg
     6301 gccgtcctgc ctaaccgtca cgacggtctt ggtcccacgg gtcgttacct gctcgatcga
     6361 cccgtcgaca ctctcagtgg tgaagagcca gtagtaccag aaccagccca gatcctgctt
     6421 gagcgcgcga ttcatgaaga acatccagtc ccagggcgag ggatgcttgt acatccacgc
     6481 tatagcccac tcccgatggg cccgctggac cgcgctgtcg cccacgatgc cccccagcat
     6541 cgacagcatg agaggggtct tggtgtaggt ggtgaagccg tagaactgcg atccgccata
     6601 gttcgcgttc cacatcatgg gcggctcggc ctcgttcccg ctggtcagtc cgtacgactg
     6661 tcccaaccgg tccagatcgc gatcggccgc gcggccaccg acatcagctg ccgagagaat
     6721 gttcatgtac tggttgaacc cttcgtccat ccagccatac caggtctcgt tgttgctcac
     6781 cgtcatgggc caccactggt gggccgcctc gtgatcggcc gcgccctggt tggagttgat
     6841 caccatgggg tactccatcc cggcgctggg gccgtcctgc agggtgagct gcgggaacgg
     6901 gtaggggaac cagagtttcg agtagaactc caacgcatgg cgggtgatcc gcccggcgtt
     6961 ggcgtagagg ttggcgcgac cggggagaaa gagcatatgg atggggaccg cgcccttgcc
     7021 cggaatggtg gcccgcagcg tctgccagac gtacttccgg gcggtggccc aggcgaagtc
     7081 gttcacgcta tcggccacga agtgccagac cagcctgtca ccggtggcag gcgtggcggt
     7141 ggcttgtccc ggaccagtct cgtccgggcc gacgatggtg gtgatgctgt cggagcccaa
     7201 tgccttggcc agccgctccc gggcgcgtgg cgtgagaacc tcttcggggt tctgcagctc
     7261 gccggtgcca ctcacgatcc accccgcggg gacatcgatg cgcacgtcga accggccgaa
     7321 gttgttgtag aactccgagg gacccaggta caagtcggca tcccagcctc gcagatcgtc
     7381 atagaccgcc acccgggggt accactgggt gggctgatac agtgtgtcgg cccaccgctg
     7441 ggtcattcgg tgcccgttgc cagggccacc cggcagcttg tggttccaat ccacctcgag
     7501 tctggccgtc gcccccgcct gaatcggctg cgacagggcg atgcgggtcg aggtgagtct
     7561 gagaccaaag gccgaaggct cggagacggt ctcggcgcct cgaggctccc tgcccggtgc
     7621 caggtttacg gatcgtccgt tcagcgtcag ccgggtcacc accataccgt cggtgagctc
     7681 ggccggcacc cacggagcgg cgtgcggcgt gaagccgaga aagaggttcg gatccagccg
     7741 cagcacgatg ttccgcaggg aatccgggct ggtgttgtga atgacgatgg tttcgcggcc
     7801 ggtgatgcga gacgccccca cgtccagcac ggcgtgaatg gtgtagtcgg tccgaagctg
     7861 ccagtagttc cgtcccggcc ggcccgtcga gtcgcgggtt cctgccgcgt aggctcgccg
     7921 gatcgcattg gtgatcggga tgttgcgccg gatggcgcgt tcggggagcc gttccggggt
     7981 cgtggtctgc ccgcgggcgg gcgtaacgcc acagatgagc gtcgcaatca ggccaacagc
     8041 cgggcgcaag ggaccgatca tggagtgttc cgtagcaggt aatgggtgat cgagcggcca
     8101 cagtttccca ctcaaagaga tatcgcaccg cagccccaaa cgggagcggg cccatccccc
     8161 gctccttaca gattccttac gacagtggtc gcctggaaca tctggcgtcg cccgcgaaac
     8221 cggtgaaact tcccgacgca tgcccgtctc tgacctggct cgcctgtcac aacgccccgg
     8281 ggtggtcggc gccgggcttc tggtggcaac cctggtactg gccggcgccc tcggtctcga
     8341 ggcgactcgc tcggctgcct ctcatcgcgc ggcggtcgaa cgaaccctcc aggactacgc
     8401 cgccatcgcc gcgtggcagt tcgcccgtca gggccgcatc tggctcggct tcggcatgaa
     8461 ccaggcgggc gcccagatcg atcgcgagct gccggacccg aaacggggtt cgctccccgg
     8521 acccgagctg ctgcgccggg ttctggccga gaaggagtgc gactgcatga gcgcgggatt
     8581 cgcgcgcact gcctttcgcg cgaccttcgg tcccgaaccc cggttgctgg aggacggcga
     8641 accgttcact ccggccgccc gcgccagtct gctggcgctg ctggcggccg actcggtgcc
     8701 gagggaagga cctcgccgct ggcggattct gccgccgggg gaacccgggc tccatcgtcc
     8761 cgatgacgtg atcctgctgt ggaaggtggt gcggcgagtc ggccaggacc cggagttgtt
     8821 ggaagcggtg tacggcatgg tggttgaggt ggcccagatc cggcgtccgt tgctcggcgc
     8881 cgtcggcgat accgagttcc tgcctccgtc gctcatccgc ggggcccgca ccgattcggt
     8941 ggttcgcctg gcggtggccg gtccggggcg tccgcccctg ctggagaccg ctcccggtgc
     9001 accggcctac gccggcgccg acacgctcgg ctggttgtac gggaatctga atgtcaccgc
     9061 ggaaatccgt ccggccgccg ccgcgctgct ggtggccggc gggcttccca cgccgagagg
     9121 ccgccagctc gcggccctcc tggtggtgac gctcgcggtg gggggcgcgg cgttgctgct
     9181 gcttcggcgc gaacagcagg tggcccggtt gcgcgacgat ttcgtctcgg gagtctcgca
     9241 cgagctcagg accccgctca cccagatccg gatcctgagc gagctgttgc agggcgaagg
     9301 atttcgggcg gatgaagaac gggcccgggc cgtctccatc attcatcgag aggcgctccg
     9361 gctcaccaac ctggtggaca atgtgctgca gttcgcccgg ctgcgacgcc gcccggcgcc
     9421 acccgctgcg gcccccgtgg tgctggcgga tgtggtggcg gaggttgtgg aagcgttcca
     9481 tcccatgctg gatgccagcg gcaaccaagt catcctcgaa ctgcccgacg gtctcgaagc
     9541 gatcggcgat cgggacgccg tcgcccggat tctccgcaac ctgctcgaga acgccgtgaa
     9601 gtacgggccg cagggccaga ccgtccgcgt ggcggtcgcg cgtaccgggg gcgtcgcccg
     9661 gctcagcgtc gaggaccagg ggccgggtat cccggcggcc gatcgctccc ggatctggcg
     9721 gccctaccag cgactggagc gggatcgaaa cgcctcggtc ggagggagcg ggctcgggct
     9781 ctcggtggtg gccgagctga ccgcgctgct agggggccgg gcctgggtgg aggatgccgc
     9841 tccgggcggg gctcgcttcg tggtggagct gccggccgcg gtcgggcgag acggcggtgc
     9901 agcgtgaccc agatcctggt gatcgaggac aatctcgacc tggctttcgg tctcgagacc
     9961 gcgctcgaga acgaggggtt cggggtcgag atcgccccgg acggcaaggc cgggctgcag
    10021 cgagccctga agggcggcat cgacctcatg gtgctggacc tgatgctccc cggactggac
    10081 ggataccggg tgttgcgggc gttgcggaac gaaggcatcg agatcccggt cctggtcctc
    10141 accgccaaag gtgaggaatc caacaaggtc caggcgttct ctatcggggc cgatgactac
    10201 gtcaccaagc cgtttgggac gttggagctg atcgcgcggg tccgtgccct gctgcgccgg
    10261 gccggccgtc gtgatgggcc ggcgctcccc tcgatcgagc ggttcggcga gatcgaggtc
    10321 aatcccgcat cgcggacggt ctaccgggcg gggcaggcgg tggggctgac gccgcgggaa
    10381 ttcgatctcc tcctggcgct gctcaagcgc cggggcgcgg tcgggtcccg ggtagagctg
    10441 ttgcgcgagg tgtgggggta ccaggcggaa gtcatgtcgc gcacggtgga catgcatgtg
    10501 gccgagctgc gacgcaagct ggagccggac ccaacggcgc cgcgtcacat tctcaccgtg
    10561 tggaaggtgg gctaccgcct ggagcgctga ggcggcaccg cctgacaaat cccgtacaac
    10621 tcctgtactc cgtcatcatc cgctcgggcc gggcccgcgc catacttccc gcggccaatc
    10681 ttccggagct cctcgatgag cggcactgtt gcgcctaacc tcgccacccc tgcgatggcc
    10741 cgggagccgg ccgcccgaga tctggctcca gcccggccgc ggatgctttc gatcgatatc
    10801 cttcgcgggg cggtcatggt cctgatggcc atcgatcatg tgcgggtctt cctgtcggcc
    10861 gaaccgctgg cgaacctgag ccgtatttcg gcctccttgt ttctcacccg gtgggtgacg
    10921 cacttctgcg cgccggtgtt tctgtttcta gcgggaaccg cagcgttctt ctacggccgt
    10981 cgggtccagg agaccggaag gctggcgcgc ttcctcgtaa cccgcggcct ctggctggtg
    11041 ctgatggagc tgacgctggt ccggctgggc tggaccttca acttccgcta cgaccagctc
    11101 ctcatggcgg gtgtgatctg ggccatcggc atctgcctga tcctgatggc ggcgctggtc
    11161 tacctgccgc ggccggcgat cgcgctggtc ggtttcgcga tcgtggcggg tcacaacctg
    11221 ctggatccgg tcgcgcagac gatgcgccaa tcgctgtcag ggagcgatct ggggtggctg
    11281 tggcaggtcc tgtacttcgg cggcccgatc cagctgggga ccgggggtcc ggtgctggcg
    11341 gtgctgtact cgatcgtgcc ctggatcggg gtgatggcgc tggggtatgc cttgggaacg
    11401 gtccttgagc tgccacccgc gcggcggcgg cagctgtgct tgcgaatcgg gttgggggcg
    11461 gtggcggcgt ttctgatcat tcggggcttc aacctctacg gcaaccctcg tccctggagt
    11521 ccggcgcaac gcgcgccgct gttcgcggcg ttctcgttca tcgataccaa caagtacccg
    11581 gcgtcgttgc tctttcttct gatgaccctg gggccggcga tcgctctgat cccggcgctg
    11641 gagcgggtcc gcggccggct ggccgacgcg ctctcgttat tcggccgggt accgttcttc
    11701 tactatctcc ttcacctgcc gctgatccac gggattgcgg tggtgctggc gttcgctcgc
    11761 cacggccggg tcgatccctg gcttttcggg aatcatccca tcggcgtgcc gcccaccccg
    11821 gccggtctgg gttatggtgt gccggtcctg ctgctcacga ctctggtgac ggtggtgcta
    11881 ctgtacttcc catgccgctg gttcgcggcg atcaagagcc gtcggcggga gtcgtggctc
    11941 agccttctct gatccaattc accaggagga agaaccatgc tgacgctttc gctgacctgg
    12001 atgctcgtct cgaccgctgt ctcgccggcc gggccggcgc tcggagtcga gcggctcgcc
    12061 gacgacacgt ccttggcctc gctgtacgcg gctcgggaaa aggcctggcg ggactacttc
    12121 gccaacagtc ccgacctggc caggacgctt cccgccgatt tcgtggggat cgaagcgggc
    12181 gattcgctct gggatgacct ggccgaaacc ctggctgcgg cgaaggcatc ggccagccgg
    12241 ggaatcaggc tgaccgcgtt gcggtttccc cgcaatcggg tggaacggta cggcaacgtg
    12301 gccgtcattc actcccgcta cgaagccgag ctggaaggcc ccgatgg
//
LOCUS       DASWKS010000425         2209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_591988, whole genome shotgun sequence.
ACCESSION   DASWKS010000425 DASWKS010000000
VERSION     DASWKS010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_591988"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(505..1737)
                     /locus_tag="VGA78_12135"
     CDS             complement(505..1737)
                     /locus_tag="VGA78_12135"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9894668.1"
                     /translation="MIWSLSAVAFGYAFFQRVAPSVMVSDLMETFSVGAAVLGQLSAF
                     YFYPYALLQIPIGVLLDRFGARVLLSGAMALAAIGSIAFGLASSLELAYAGRFLIGVG
                     SAVGFIGSMALATQWFPVHRFALLAGLAMLMGMVGGFAGQAPLAALITVFGWRATMLA
                     SGGAAAGLAIAIALVVRNSPRPSIERPARRQQWAELRGGLSQAVRSREIWLIAIVATS
                     MSGPMLAFGGLWGVPYLVVAYDLPRPQAALLVSMMLVGWAVGAPAGGWVSDYVRRRKA
                     PLISAASALLLLLVILTAVPQLPLWVLVAVIFAIGFTGGHMVITYALAREVSPPGLHG
                     SVMGLVNGMTVASAALLQPLIGALLDGLWDGTMASGVRVYEASDYRLALASLVAWTAM
                     GLVASLYLRETRCRPVEI"
     gene            complement(1897..>2209)
                     /locus_tag="VGA78_12140"
     CDS             complement(1897..>2209)
                     /locus_tag="VGA78_12140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894669.1"
                     /translation="ARSIMDPFPEASTSLEFYTFTKSSGSVQLDWEHKSNNAGCGAAP
                     VPDATMENLMAEDNDVVVSRTCYIWQPVLGIILGFSTTTVQDQLMLRPRQTARITCDD
                     C"
BASE COUNT          454 a          718 c          749 g          288 t
ORIGIN      
        1 ggcaagaacg gcaaagaaga ccgtggcggt caaggaagct ccccgggagg ctggcggacg
       61 acggattcgc cagtctaaag caatgttcta tcggattgaa tcagcactgt ctccgtccac
      121 ccccgtctgg ccggaaacaa aagaagcccc ggcgttcggg ggaggccggg gctgggagtc
      181 ctgccgcagc ggaaggcgca aggccgacgg aacggggagg aaccgtgctt tcaatggctt
      241 acagcggcaa cagtctcgtg gcacctcacc agcatgtcat cctccggcga gccgaaggcg
      301 agaccggggg acccagcaat cacacgcgtc tcgggtgatt actgggtggc ccggtcaagc
      361 cgggccatga caaacggtgg gacatatccc tgacgcggac cactcttcag cgcagatgtg
      421 tgaatgtcgt aggtctattc ccgagcggcc gaagggtcca ttcgccctga cgacctagac
      481 cagacggcag gccgcaagcg gcgtttagat ttcgaccggg cggcagcgtg tctcgcgcaa
      541 ataaaggctg gcaacgagcc ccatcgccgt ccacgccacc aggctggcaa gggccaggcg
      601 gtagtcggac gcttcataga cgcgcacgcc gctcgccatc gtcccgtccc acaagccatc
      661 gagcagggcg ccgatcagcg gctggagcag tgcggcggag gcgaccgtca tgccgttcac
      721 gagccccatg accgagccgt gaagcccggg cgggctgacc tcgcgggcaa gagcataggt
      781 gatcaccatg tggccgccgg tgaacccgat ggcgaagatg acggcgacga gcacccacag
      841 cggcagctgc ggcacggcgg taagaatgac cagcagcagc agcaaggccg atgccgcgga
      901 gatgagcggc gccttgcggc gccggacgta atcggacacc cagcccccgg ccggcgcacc
      961 caccgcccag ccgaccagca tcatggacac cagcagggct gcctgcggcc ggggcagatc
     1021 gtaggcgacg acgagatagg gcacgcccca caggccacca aaggccagca tcggccctga
     1081 catcgaggtc gccacgatgg cgatcagcca gatttcacgg gagcgcaccg cctgcgacag
     1141 gccgccgcgc agctcggccc attgctgccg gcgcgcgggc cgctcgatgc tgggccgggg
     1201 ggaattgcgc accaccagtg caatcgcaat cgccagcccg gccgccgcac ccccgctcgc
     1261 cagcatcgtc gcgcgccagc cgaagacggt gatgagcgcc gccagcggag cctggccggc
     1321 aaaaccgccc accatgccca tcaacatcgc cagtcccgca agcaacgcga accggtggac
     1381 cgggaaccat tgtgtggcga gcgccatgga gcctataaat ccgaccgccg aaccgacgcc
     1441 gatcagaaac cgccccgcat aggcgagctc gagcgaggag gcgagcccga aggcaatgct
     1501 gccgattgcc gccagtgcca tcgcgcccga cagcagcacc cgtgcgccga agcggtccag
     1561 cagcacgccg atgggaatct ggagcagcgc ataaggatag aaatagaacg ccgacagctg
     1621 gccgagaacg gccgcgccga cggagaaagt ctccatcagg tcgctgacca tgacgcttgg
     1681 cgccacgcgc tggaagaagg cgtagccgaa ggcaacggcg ctcagagacc agatcaacca
     1741 ggctctggcg ccgccgatcg gtgatgccag aggcgggggg ctcgcagacg acaagtgccg
     1801 gtaccgcagt gatgaggggc gagcgcaagc ctacccgcag atcggcggct ggaaaagccc
     1861 ttgcgtcaga atggcgttgc ggctggtttg cgcccgctag cagtcgtcgc aggtgatgcg
     1921 ggccgtctgg cgcggcctca gcatgagctg gtcctggacc gtggtggtcg agaatccgag
     1981 gatgatgccg agcaccggct gccagatata gcaggtgcgc gagaccacga cgtcgttgtc
     2041 ttcggccatg aggttctcca tggtcgcgtc gggcaccggg gcagcgccgc aaccggcgtt
     2101 gttgctcttg tgttcccagt ccaactgcac cgagccgctc gacttggtga aggtgtagaa
     2161 ctcgagcgag gtgctggcct cgggaaaggg gtccatgatg gacctggcg
//
LOCUS       DASWKS010000426         3484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1322710, whole genome shotgun sequence.
ACCESSION   DASWKS010000426 DASWKS010000000
VERSION     DASWKS010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322710"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VGA78_12145"
     CDS             <1..283
                     /locus_tag="VGA78_12145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894670.1"
                     /translation="IVDANPPLEAEVVMAPTGPGAVRFVLTTIRVNGYAIPEALLSRF
                     LSQVGARYPALTKTGRELLVGVPVDGRVALVLDGVKLWTEDLGTKAPPR"
     gene            362..751
                     /locus_tag="VGA78_12150"
     CDS             362..751
                     /locus_tag="VGA78_12150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894671.1"
                     /translation="MAIIRPALLLLLACSELTVNFLSFSTWGGIHIGLTITVGGARVE
                     YDCAEGEILEPISPVDGRFSVQGIHRAGVGGPIGIDPATSPRPARYEGVVRGDRMTLT
                     VTLTDKNERLGVFELRGGASPQVFKCL"
     gene            complement(738..1574)
                     /locus_tag="VGA78_12155"
     CDS             complement(738..1574)
                     /locus_tag="VGA78_12155"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX9894672.1"
                     /translation="MVRPVPAGVGRHRSGVTRETLTLLLDPTARPIIAHRGASAEAPE
                     NTLEAFRIAVAQGCDALELDVRLTRDGVAVVLHDPTLQRTTDRPGDVARLTFGELQAA
                     DAGGGFRSEDGSRPFAGRGIRIPAVAQVLEEFPHLPLLVEIKAPEAQHAVARDLERAN
                     AAGRCVVAAFNRGALDVLRREPFLIGADRREVATLYTRTRLGLATPMPRCRCYAVPWR
                     WRDRIEVPSTGFINAARRHDRPVHVWTVDQPEVAKELWKRGASGIITNRPGLIRTAAT
                     ST"
     gene            complement(1511..>3484)
                     /locus_tag="VGA78_12160"
     CDS             complement(1511..>3484)
                     /locus_tag="VGA78_12160"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9894673.1"
                     /translation="RRAVTVDDYFAIKRVADPRVSPDGRWVAYTVSTSVLADDKSESR
                     IWMAPVAGGDPIPLTMKGASASSPRWSPDGIWLGFLAARSGGETQVWLLNRLGGEAEQ
                     LTEVKQGVEGFTWSPDGARLALMVKDPTPEQAGDSSWIGHKAKTPRPWVVDRLQFKRD
                     YTGYLSRLRTHLYRFELKSRKLTQLTSGEWDDGSPAWSPDGRFIAFSSNRDSVDGSYN
                     SDIWVIAADDTTRGATTRRLTTDPGQDGSPAWSPDGQWIAYTRQPSGQPLSLIYDPDH
                     LALIPAGGGMPRALTASLDRGVGSPRWAPDGQSVYTLLETSGEQHLIRVPLNGGNPVP
                     VIAGARVVSSYDLAPDGTVLALVSEPTLPNEVFAATGTGLRQLSFTNRELLGQLELVD
                     PEELTARSRDGAAVEYFLYRPRGGDAGRPPPALLRIHGGPVSQYDKSFTFDAQLFAAR
                     GYAVVMANPRGSSGYGARFARAIFADWGNKDFDDILAAVDHAVARGTADPERLGVGGW
                     SYGGILTNYVITKSTRFKAAISGASEALYTANYGHDHYQYLWEIELGLPWRNQKAWDR
                     ISPFWSVEKIVTPTLWIGGEKDWNVPIINSEQMYQAMRRLGRTTELVVYPGQFHGISK
                     PSYVKDRYQRYLAWYDRFLQESAVTGPGSREKP"
BASE COUNT          543 a         1152 c         1212 g          577 t
ORIGIN      
        1 gattgtggac gccaacccgc cgctcgaggc cgaggtggtc atggcgccca ccggtccggg
       61 ggcggtgcga ttcgtgctca ccaccattcg cgtcaacggc tatgcgattc ccgaggcgct
      121 gctctcgcgg ttcctgtccc aggttggagc ccggtatccg gcgctcacca agaccgggcg
      181 ggagctgctg gtgggggtcc cggtggatgg acgggtggcg ctggtgctgg atggggtgaa
      241 actctggacc gaggacctag gcaccaaggc gccaccgcgt taacaggggt cgaaggggtc
      301 gaaggggtcg aagcagtcga aggcggtcga aggggtcgaa gaggtcgaag gcgattctac
      361 catggcgatc atccgtcccg cattgctcct gctgctggcg tgctccgagc ttacggtcaa
      421 cttcctctcg ttttcgacct ggggtgggat tcacatcgga ttgaccatca cggtgggcgg
      481 ggccagggtc gagtacgact gcgcggaagg cgaaatcctg gagccgatca gtccggtgga
      541 cggccggttc agtgtgcagg ggattcatcg ggccggcgtc ggcggcccga tcgggatcga
      601 cccggcgact tccccccggc cggcccgcta tgagggcgtc gtccggggcg atcgcatgac
      661 attgacggtt acgctgaccg acaagaatga acggctgggc gtgttcgagc tgcgcggggg
      721 ggccagtcct caggtcttca agtgcttgta gccgccgttc gtatcagacc cggtcgattg
      781 gtgatgatcc cgctggcccc ccgcttccac aactccttcg ccacctcagg ctgatccacg
      841 gtccacacgt gtaccgggcg atcgtgccgc cgggcagcgt tgatgaaccc ggtcgaggga
      901 acttcgatgc gatcccgcca acgccaaggc actgcgtagc aacggcagcg gggcatggga
      961 gtcgcgaggc ctaaccgggt ccgggtgtac agcgtggcga cctcgcgtcg gtcggccccg
     1021 atcagaaacg gctcgcgccg gagcacgtcg agcgcgccgc ggttgaacgc ggccacgacg
     1081 cagcgcccgg ccgcgttggc ccgctccagg tcgcgcgcca ccgcgtgctg cgcttccggc
     1141 gccttgatct cgacgagcaa cggaaggtgg gggaattcct ccagcacctg agccaccgcc
     1201 ggaatccgga ttccccggcc cgcgaaggga cgcgagccat cttcggacct gaagccgcca
     1261 cccgcatccg cggcttgcag ctcgccgaag gtgagccggg ccacatcccc ggggcggtcg
     1321 gtggtgcgct ggagcgtggg atcgtgcagg accacggcaa ccccgtcgcg ggtgaggcgc
     1381 acgtccagct ccagcgcgtc gcagccttgc gccaccgcga tacggaacgc ctcgagggta
     1441 ttctcgggcg cttccgccga ggcgccccgg tgagcgatga tggggcgggc ggtaggatcg
     1501 aggagcaggg tcagggtttc tctcgtgacc ccggaccggt gacggccgac tcctgcagga
     1561 accggtcgta ccacgctaga taccgctggt accgatcctt cacatagctc ggcttgctga
     1621 tcccgtgaaa ctggccggga tagaccacca gctcggtggt gcgtcccagc cgccgcatcg
     1681 cctgatacat ctgctccgag ttgatgatcg gcacgttcca gtccttctcg cctccgatcc
     1741 agagcgtcgg cgtcacaatc ttctcgaccg accagaacgg tgaaatccgg tcccacgcct
     1801 tctggttgcg ccagggcagc cccagctcga tctcccacag gtactggtaa tggtcgtgcc
     1861 cgtagttggc ggtgtacagc gcctcgctgg cgcccgagat cgcggccttg aaccgggtgg
     1921 acttggtgat gacgtagttg gtgaggattc cgccgtagga ccagccgccc acacccagcc
     1981 gctcggggtc ggcggtacct cgtgccaccg cgtggtctac cgcggccagg atatcgtcga
     2041 agtccttgtt gccccagtcg gcgaagatgg cgcgggcgaa gcgggccccg tatcccgacg
     2101 agccgcgcgg attggccatc accacagcat agccgcgggc ggcgaacagc tgggcgtcga
     2161 aggtgaacga cttgtcgtac tgcgaaacgg ggccgccgtg aatccggagc agggcgggag
     2221 ggggccgccc ggcgtcgccg ccccggggac gatacaggaa gtactccacc gcggcaccgt
     2281 cccggcttcg ggcggtgagc tcctccgggt cgaccagctc gagctgtccc aaaagttccc
     2341 ggttggtgaa gctgagctgg cgcaggcccg tcccggtcgc ggcgaacact tcgttaggca
     2401 gggtgggctc gctgaccagc gccagcaccg ttccgtcggg ggccagatca taactgctca
     2461 ccaccctcgc cccggcgatg acgggaaccg ggtttccgcc attcagcggc acccggatca
     2521 gatgctgctc gccgctggtc tccagcaggg tgtagacact ctggccgtcg ggagcccagc
     2581 ggggcgagcc caccccccgg tcgagcgagg ccgtcagcgc ccggggcatc ccgccgccgg
     2641 ccggaatcag cgccaggtgg tcggggtcat aaatgaggga caaaggctga cccgacggct
     2701 gccgggtgta cgcgatccac tggccgtcgg gactccaggc cgggctgccg tcctggccgg
     2761 gatcagtggt caggcgccgg gtggtggccc ccctggtggt gtcgtcggcc gcgatgaccc
     2821 agatgtcgct gttgtacgag ccgtcgaccg agtcgcgatt gctggagaac gcgatgaacc
     2881 gcccgtccgg actccacgcc gggctgccat catcccactc gccggaggtc agctgagtca
     2941 gcttccggga tttgagctcg aagcgataca ggtgggtcct gagccggctc aggtacccgg
     3001 tgtaatcgcg cttgaattgc agccgatcca ccacccaggg tcgaggcgtc ttggccttgt
     3061 ggccgatcca gctgctgtcg cctgcctgct cgggggtcgg gtctttgacc atgagcgcca
     3121 gtcgcgcgcc gtcgggcgac caggtgaagc cttccacacc ctgtttgacc tcggtcagct
     3181 gttccgcctc tccccccagg cggttgagca gccagacctg ggtttcgccc ccgctccgcg
     3241 cggccaggaa acccagccag atgccatcgg gactccagcg ggggctggac gcggaagcgc
     3301 ctttcatggt gagggggatg ggatcgccgc ccgccactgg ggccatccag atccggctct
     3361 ccgacttgtc atcggcgagc acgctggtgg agacggtata ggccacccac cggccgtcgg
     3421 ggctgacccg cgggtcggcg acccgcttga tggcgaagta gtcgtcgacc gtcacggccc
     3481 ggcg
//
LOCUS       DASWKS010000427         1748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1323156, whole genome shotgun sequence.
ACCESSION   DASWKS010000427 DASWKS010000000
VERSION     DASWKS010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323156"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VGA78_12165"
     CDS             complement(<1..389)
                     /locus_tag="VGA78_12165"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEX9894674.1"
                     /translation="MSAESGRSARVTAAASVVASRLGPRRPEIAVVLGSGLGMVADRV
                     GDPRRIPYGDIPGFFVPTVEGHKGELVVGTLGGREVVVQSGRFHMYEGHSADDAALPV
                     RVFATLGVRILILTNAAGGIRQTFAPGT"
     gene            complement(386..>1748)
                     /locus_tag="VGA78_12170"
     CDS             complement(386..>1748)
                     /locus_tag="VGA78_12170"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HEX9894675.1"
                     /translation="LLERLVGLIGMATMIGLAVLLSYDRRRIKWRLVASGLGIQAVFG
                     LIVLKTEVGRRFFSALGDAITGLLRFQEQGARFVFGNLVQNQVPVGSPAAGGGLDTTA
                     GLVAQTGAFFAFSVLPTIIFFSALMSVLYYLGVMQLVVKGLAWVMQKSLGTSGAETLS
                     ASGNIFLGQTEAPLLIKPFVKTMTPSELVTVMVGGFATVAGGVLAAYVGMLSGIFPNI
                     ASHLLAASVMNAPAGLLLSKILLPETGTPVTKGSLTMDVEATRTERPRLLSLRSLRMA
                     TGSTESSVIEAAANGAAQGVQLAINVAAMLMAFVALVALLNFLLGWAGGLVGLPDLSL
                     QGILGFVLRPLAWVMGVPWQDTAYVGGLIGIKTTLNEFVAYAQFGSDLGAGLPLSPRS
                     AIICTYALLGFANFSSIAIQIGGIGGLAPERRSEIAKFGLRAMIAGNLAAMLSASLAG
                     MLV"
BASE COUNT          339 a          603 c          570 g          236 t
ORIGIN      
        1 gtaccgggcg cgaaggtctg gcggatcccc cccgcggcgt tggtcagtat gaggattcgg
       61 actccgaggg tggcgaacac ccggaccggg agcgcggcat catcggctga atgcccctca
      121 tacatgtgaa agcgtccgct ctggaccacc acttcgcgcc cgcccagagt gccgaccacc
      181 agctcaccct tgtggccctc cactgtcggt acgaaaaacc cggggatgtc gccataggga
      241 atccggcgcg ggtccccgac ccgatcggcc accataccca gaccggaacc cagcaccacg
      301 gcgatctcgg gccggcgggg acccagtctc gaggccacga ccgaagccgc cgcggtcacc
      361 cgggcggatc gtcccgactc ggcactcaca ccagcatccc cgccaacgac gccgagagca
      421 tcgcggccag attgccggcg atcatcgccc ggagcccgaa cttggcgatt tcgctgcgcc
      481 gctcaggcgc caggccgccg atgccgccga tctgaatggc gatggaagaa aagttggcga
      541 atcccagcag agcataggtg cagatgatcg cactgcgggg agacaggggg aggccggcgc
      601 ccagatcgct gccgaactga gcataggcga cgaactcatt cagggtggtc ttgatgccga
      661 tcagtccgcc gacataggcc gtgtcctgcc acggcacgcc catgacccag gccaggggac
      721 gcagcacaaa gccgaggatg ccctgcaggc tcaagtcggg caggccgacc agccccccgg
      781 cccaacccag caggaagttg aggagggcca ccagcgccac gaacgccatg agcatggccg
      841 cgacgttgat ggcgagctgc accccctgcg cggccccgtt ggcggccgcc tcgatgacgc
      901 tcgactcggt ggacccggtg gccatccgga gcgaacggag gctgagcagc cggggccgct
      961 ccgtcctggt cgcctccacg tccatcgtca gcgatccttt ggtgaccggc gtgccggttt
     1021 ccggcaggag gatcttggag aggagcaggc ccgccggggc attcatcacg ctggccgcca
     1081 gcaggtgact ggcgatgttg ggaaagattc ccgacaacat gccgacatag gccgcgagca
     1141 ctccccccgc cacggtggcg aacccgccga ccatgaccgt gaccagctca ctcggcgtca
     1201 tggtcttgac gaacggcttg atcaggagcg gggcttcggt ctgacccagg aagatgttcc
     1261 ccgacgccga gagcgtctcc gcgccggacg tgccgagact cttctgcatg acccaggcga
     1321 gccctttcac caccagctgc atcacgccga gatagtagag cacgctcatc agggcgctga
     1381 agaagatgat ggtggggagg acactgaagg cgaagaacgc gccggtctgg gccaccaggc
     1441 ccgcggtggt gtcgaggcca ccaccagccg cgggtgagcc gaccgggacc tggttttgca
     1501 ccagattgcc gaagacgaac cgggcgccct gttcctggaa tcgcagcagg ccggtgatgg
     1561 catcgcccaa cgccgagaaa aagcgccggc ccacttcggt cttgaggacg atgagaccga
     1621 agacggcctg gatccccagg ccggacgcca ccaggcgcca tttgatccgc cggcggtcgt
     1681 aggacaacag caccgccagg ccgatcatgg tggccatgcc gatcagcccg accagccgct
     1741 ccagcagc
//
LOCUS       DASWKS010000428         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2460339, whole genome shotgun sequence.
ACCESSION   DASWKS010000428 DASWKS010000000
VERSION     DASWKS010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2460339"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1209
                     /gene="paaK"
                     /locus_tag="VGA78_12175"
     CDS             <1..1209
                     /gene="paaK"
                     /locus_tag="VGA78_12175"
                     /EC_number="6.2.1.30"
                     /inference="COORDINATES: protein motif:HMM:TIGR02155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047475 - phenylacetate-CoA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase PaaK"
                     /protein_id="HEX9894676.1"
                     /translation="IRHAWDHVPHYRRKFREAGVHPDDLRRLEDLARFPFTTKEDLRA
                     SYPFGLLAVPREQVLRIHASSGTTGRPTVVGYSARDLAMWAEVGARSIRAAGGRPGDI
                     VHVAYGYGLFTGGLGAHYAAERLGCTVIPMSGGQTERQVQMIQDLRPQVIMVTPSYML
                     AIADEFARQGLDPRRSSLLVGIHGAEPWTDAMRGEIEERFAMDAVDIYGLSEVIGPGV
                     ANECLETKDGLTIWEDHFYPEIVDPATGQPEADGERGELVFTSLTKEALPVIRYRTRD
                     ITRLLPGTARSMRRMARITGRTDDMLIIRGVNLFPTQVEELILQDPRLAPHYVLEVRR
                     VGRLDQVDVVVEPKAAGAEALAAADAGARQLESRIKDRIGVSTRVRVTDVGGVIRSLG
                     KAKRVIDLRQ"
     gene            1282..>1647
                     /locus_tag="VGA78_12180"
     CDS             1282..>1647
                     /locus_tag="VGA78_12180"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9894677.1"
                     /translation="MSPLQAQEDESAIRAARARSNAAIAAHDLDGLARVWMENVHVVT
                     STGAQEAGRERNRASFAAHFRDRPDVVYVRTPESIDVFAAWDVAAERGRWTGQWTQAD
                     GVTRISGTYLAQWRKVKGEW"
BASE COUNT          271 a          521 c          598 g          257 t
ORIGIN      
        1 atccggcatg cctgggacca cgtcccccac tatcgcagga aattccggga ggccggagtt
       61 cacccggatg acctgcgccg attggaagat ctggcgcggt ttccgttcac caccaaggaa
      121 gaccttcgag ccagctatcc cttcggcctg ctcgccgtac cgcgggagca ggtgctccgg
      181 atccacgcct cgtcgggaac cacgggccgg cccacggtgg tgggatacag cgcgcgggat
      241 ctggcgatgt gggccgaggt cggggcccga tcgatccggg cggccggcgg ccgcccgggc
      301 gatatcgtgc acgtcgccta cgggtatggg ctgttcaccg gagggttggg ggcccactac
      361 gccgcggaac ggttaggctg caccgtcatc cccatgtcgg gcggccagac ggagcggcag
      421 gtgcagatga tccaggatct caggccccag gtcatcatgg tcacccccag ctacatgctg
      481 gccatcgcgg acgagttcgc ccgtcagggc ctcgatcccc ggcggagctc cctgctggtc
      541 ggcattcacg gcgcggagcc gtggaccgac gccatgcgag gcgagatcga ggagcggttc
      601 gccatggatg cggtggatat ctacggcctg tcggaggtca tcggccccgg cgtcgccaac
      661 gagtgcctcg aaaccaagga cgggctcacc atctgggagg atcacttcta tcccgagatc
      721 gtggatcccg cgaccggcca acccgaggcc gacggtgagc ggggagagct ggtgttcact
      781 tccctcacca aggaggcgtt gccggtcatc cgttatcgca cccgcgacat cacccgacta
      841 cttccgggaa cggcgcgctc gatgcggcga atggcccgga ttacggggcg gaccgacgac
      901 atgctgatca ttcggggagt gaacctgttt cctacccagg tcgaggagct gattctgcag
      961 gatccccggc tggcgcctca ctacgtgctg gaggtccggc gggtgggccg actggaccaa
     1021 gtcgatgtgg tggtggagcc caaagcggcc ggcgccgagg ccctcgccgc ggcggatgcc
     1081 ggggcgcgcc agctcgaatc gcggatcaag gatcggatcg gcgtgagcac ccgggtcagg
     1141 gtgaccgacg tgggcggagt gatcaggtcg ctggggaagg cgaagcgggt gatcgacttg
     1201 aggcagtgaa ccggcaacgg tcaacggtca acggtgaaac cgtctcgtga gctctgcctt
     1261 gccctcctcc ttggggccgc cgtgagcccg cttcaggcgc aggaagatga gtccgcgatc
     1321 cgggcggcgc gggcgcgctc caatgcggct atcgcggcgc acgatctcga cggcctggca
     1381 cgggtctgga tggagaacgt gcacgtggtc acgtccaccg gggcgcagga ggccgggcga
     1441 gagcggaacc gggccagctt cgccgcgcac ttccgggatc gtcccgatgt ggtctatgtc
     1501 cggacgccgg agtcgatcga cgtcttcgcc gcgtgggacg tcgcggccga gcgcggccgc
     1561 tggaccggcc agtggaccca ggccgatggc gtgacccgga tcagcgggac ctatctggcc
     1621 cagtggcgta aggtaaaggg agagtgg
//
LOCUS       DASWKS010000429        11388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_217127, whole genome shotgun sequence.
ACCESSION   DASWKS010000429 DASWKS010000000
VERSION     DASWKS010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11388
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217127"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VGA78_12185"
     CDS             complement(<1..851)
                     /locus_tag="VGA78_12185"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX9894678.1"
                     /translation="MISQELDRAALHRGLDAAGADAWLLFDFRGLNPVAQRVLGLGGM
                     GTRRLFVLIPREGEMVAVAHKIELSPLRDFPGPVLPYARWQELHEALRQVVGGKTVAM
                     EISPLDSVPYLDRVPHGVVELLTSLGATVVSSAPLVTQFAARWDREETEGHLRAAEAL
                     SRIARAELERVTREANSGITESAVQRRVVDAIHAAGLQFDHPPIVGFGPNAADPHYAP
                     VAGRDRALEPDQVVLIDLWGGPSLGTVFADQTWMGYTGPKPPERVLRVWNTVRDARDA
                     AIERVQSA"
     gene            complement(848..1468)
                     /locus_tag="VGA78_12190"
     CDS             complement(848..1468)
                     /locus_tag="VGA78_12190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894679.1"
                     /translation="MSPDSAHAILPLSLLEALRNLDTPIDDGLSELAPELISKRLGLS
                     TTVASQIERYRDAAEHGDAISMDEVVSVFRLVSRRPDAQLVYADAGRRAARYAARQAG
                     GQTLLKASPRPIRRRLGRRLAARVARRLFGAELRPLGPLAEVRLPESLASRAGADGDG
                     CYFYGAVFAELLRVLSGFEGAMLHDRCRAKGDNTCYWRAAAVEGYE"
     gene            1498..2292
                     /locus_tag="VGA78_12195"
     CDS             1498..2292
                     /locus_tag="VGA78_12195"
                     /inference="COORDINATES: protein motif:HMM:NF014049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF92 domain-containing protein"
                     /protein_id="HEX9894680.1"
                     /translation="MELISLTLAAALSAGISFAGVAARALTPLAGLFAFLIGLSVIAG
                     TGWAGALALGAFFVSSSAVSRLTERSQPAWVDAKANRRDPWQVLANGAMAGVGGVVGI
                     LVHPSLGMWIAVPALAAAGADTWATSIGMLSRRDPIHLVERRRVPKGTSGGVSLIGTA
                     GGVAGSVLVASSPLLAGAPLALARFAVLIGAVGMVADSFLGATVQGRFECPACGQPSE
                     RRRHRCGMPTRHVGGVRWLGNDGVNLLATVLAGLAGWAWWLVCCSG"
     gene            2268..2663
                     /locus_tag="VGA78_12200"
     CDS             2268..2663
                     /locus_tag="VGA78_12200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894681.1"
                     /translation="MAGLLLGLSACEGQRDLFGPSRPLGQGSNTSNSPLVGTWEVTLI
                     VSVDGDLQTWTTNWQFRSDRTCTWRQIIESAVEGLSREEVRDCTWTDANSAVTVVYLD
                     TGASETLPYSFPTFDTSRLILQGVEYLRL"
     gene            2666..3874
                     /locus_tag="VGA78_12205"
     CDS             2666..3874
                     /locus_tag="VGA78_12205"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX9894682.1"
                     /translation="MQPADLLVVGAGPAGSATAIRAARAGLSVVLVDRARFPREKICA
                     EYMSPETLRHLDLLGVLAEIDQAGGMPLAGTTVVGPRGSRLTGLFDRAGSRPFRPTGL
                     SLPRRVLDDCLLRAAGAAGVTVLEGRTVTDLLYDEGAVAGAAARDQSGQVELLRSRLT
                     VGADGLRSVVAGRLGVRHHGFPARVAFVAHVAGVLGLSDRAEMHVGQGGYLGLNPLGP
                     DVTNVALVVARKHAAAARGDPTGFFAQGLGRFEAVRDRVDPRRIVREVLVTGPFAARA
                     RRVTAGGALLVGDAADFFDPFTGEGICSALKGAELAATTAVAALASPGRVSRERLRGY
                     EAARRVSFRGKWAVERLIGWGMLVPALFDRAIGRLEARGWAHTLIGVTGDFVPAGAVL
                     NPRFLSGMLW"
     gene            3897..4355
                     /locus_tag="VGA78_12210"
     CDS             3897..4355
                     /locus_tag="VGA78_12210"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX9894683.1"
                     /translation="MFRQLCGRFATGVVVVTTLSDDGRPVGMTANSFTSVSLVPPLVS
                     VNVDHAAAMHGHVSRAPRFALNILESRQEALSRRFAEEVPDRFDGIGYRVSDAALPLL
                     DGALAILECERHTSFEAGDHTIVLGRVLSGLVNEGRPLLYYRGGYYDLPS"
     gene            4352..5041
                     /locus_tag="VGA78_12215"
     CDS             4352..5041
                     /locus_tag="VGA78_12215"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX9894684.1"
                     /translation="MSRLARSQTGTEILDDPGADPRAVGLSLENIARSNRWFGGLAAV
                     RYGLERLLAGLRGRITLLDIGTGKGDIPLWARRWAGSRDLELFPIGLDRHPVAARLAA
                     RHGVSTILGCGGDLPVRSRGVDIVVVSQVAHHLDPTSCVTLFHECNRVARVGVVLADL
                     RRSRPAAAGFWIGSRLLGFDPVTRADGLTSLRRGFTAAELAALLRQSGIETPVVRRPG
                     ARLVAAWRTGR"
     gene            5041..5502
                     /locus_tag="VGA78_12220"
     CDS             5041..5502
                     /locus_tag="VGA78_12220"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9894685.1"
                     /translation="MRIVDEIDVRASPERVFSIAAQVERWPEILPHYRRVRLRERTPE
                     RSVVEMAAWRPFPGFSWPTWWVSEMWIDAARRQVRYRHLLGVTRGMKVVWRVEPRPGG
                     AHITLIHDWDGPAWPLIGRPAARWIILPVFVHGIASRTLAGVKRRAESTHA"
     gene            5495..6736
                     /gene="fabF"
                     /locus_tag="VGA78_12225"
     CDS             5495..6736
                     /gene="fabF"
                     /locus_tag="VGA78_12225"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX9894686.1"
                     /translation="MHNGRRVVVTGIGVVTPIGTGIDPFWAGLRARRSAVRTLTRFDP
                     APFRSHVAAEVDGFDPADWMEAKRAKRLDRCSQFSLAAARLALADADLDLGREDRDRT
                     GAMMGTALGGVSLAEREHGRFLAEGLRAIDPGLALTVFAGASSCNLAIEFGVTGPNST
                     NGMSCASGTMAVGDAFRAIRGNEADLMLAGGAEAPLAPLTYGAFAIIRAMSTRNDDPG
                     TASRPFDRHRDGFVMAEGAAVLLLEERSRALARGARVYLEVCGYGLTNDAHHMTAPRP
                     DGRQAARAMSLALNDAHIQPSEVEYVNAHGSSTPLNDATETLAIRQFFGDHADRLAVS
                     GTKGYYGHALGASGAIEAAICALASARRWLPPTVNLSDPDPACDLDYLARDGRDGDPE
                     FLLSNSFGFGGINAALVFKRA"
     gene            complement(6897..7022)
                     /locus_tag="VGA78_12230"
     CDS             complement(6897..7022)
                     /locus_tag="VGA78_12230"
                     /inference="COORDINATES: protein motif:HMM:TIGR04391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CcmD family protein"
                     /protein_id="HEX9894687.1"
                     /translation="MQTSPPDNGGYMIAAYLIVGVVILGYALSLLRRARTALRRE"
     gene            complement(7012..7710)
                     /gene="ccsA"
                     /locus_tag="VGA78_12235"
     CDS             complement(7012..7710)
                     /gene="ccsA"
                     /locus_tag="VGA78_12235"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEX9894688.1"
                     /translation="MTPTPENAAATIRRGLLLSTVGLLGLALVYLLAHRFTPIEVRQG
                     LAQKIFYVHAPAAWAAMLAFALVGVCGGLYLWLRDPRLDLFAEASAEVGLVFGLIMLT
                     TGPIWGKPIWGTWWTWDARLTLTLLLVFLFVGYRALRGALSDPAERARYSAVVGILGL
                     MLVPFVHLSVYLFRTLHPQPVLLKPSAPSMPAPMLRTLLTSIAVFTLLYVGFAMTRYG
                     LGLMREARGAADAD"
     gene            complement(7707..8387)
                     /locus_tag="VGA78_12240"
     CDS             complement(7707..8387)
                     /locus_tag="VGA78_12240"
                     /inference="COORDINATES: protein motif:HMM:NF015344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEX9894689.1"
                     /translation="MIEVLRHALALAAKDLRVELRSRTALVSAIAFAALVLVIFNFAR
                     DPTTVSSRDLAPSVLWVTFTFAAMLTFNRSFALEKENGAMDGLLLSPVPRGAIFLGKY
                     FANLGFVVTVQAVTLPLFVLFFNVGLGGALPGLLLVTVLGTLGFVAVGTVFASMAVRT
                     RFADLMLPVLLLPFLVPPVIGAVQVTTRLLAGRPLLEQAGWLRILGVYDVVFLTVCAM
                     VFPSLLDE"
     gene            complement(8380..9090)
                     /gene="ccmA"
                     /locus_tag="VGA78_12245"
     CDS             complement(8380..9090)
                     /gene="ccmA"
                     /locus_tag="VGA78_12245"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEX9894690.1"
                     /translation="MPESAPLLEATGIQRTFGAARVLRGVALSAGTGSLQVILGPNGA
                     GKTTLLRILAGLTRPTSGQVLVLGHSLRNTPRLRREIGLLSHQSLLYDDLTPRENLTF
                     IARLYGLKAPDQSAMAALDAVGLAQRSADPVRRLSRGMVQRVAIARALLHRPRILLLD
                     EPFTGLDPRAADRLVRLLEEQLAAGTAVVVVAHSLYDIWPVATRISVLVRGQWVIDEP
                     RPTDRDRFMVRVQEAFSD"
     gene            complement(9148..9450)
                     /locus_tag="VGA78_12250"
     CDS             complement(9148..9450)
                     /locus_tag="VGA78_12250"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX9894691.1"
                     /translation="MTMANSTERVLTAPETLGLETRAPFRQEAVAMLEELPEGLGRLV
                     VDLDKTSRVDSAGLGALMLVQRRAAERRQIVALRNISDEIRFLLALTKLIDLFEME"
     gene            9595..>11388
                     /gene="acs"
                     /locus_tag="VGA78_12255"
     CDS             9595..>11388
                     /gene="acs"
                     /locus_tag="VGA78_12255"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX9894692.1"
                     /translation="MTDQLATLLTEERRFPPPPSFAAQANATDTLYQSASRDRLAFWA
                     EQARELDWYHPWTQVLEWTPPHAKWFVGGKLNVSVNCLDRHLAGARRNKAAIVWEGEP
                     GDRRTLTYWELAREVGRAANALRRLGVGKGDRVAIYLPMIPEAAIAMLACARIGAVHS
                     VVFGGFSAESLRDRIIDAQAVAVITADGGYRRGQVLPLKRFADQAVEGCPSVKHVVVV
                     RRLGGAEGDESFTNMREGRDHWWHRLLDGETPQATPEMMDAEDMLFILYTSGTTGKPK
                     GIVHTTGGYLTQVTSTTKHVFDLKENDVFWCTADIGWVTGHSYVVYGPLANGATVLMY
                     EGAPDWPDRDRFWKIVARFGVTVFYTAPTVIRACMKWGPGYPDRHDLSTLRLLGTVGE
                     PINPEAWMWYHEHIGAGRCPIVDTWWQTETGGIMITPLPGVVTTKPGSATIPFPGISA
                     ELVDTKGQPIETGGGFLTLTEPWPGMLRTIFGDDERYRETYWSRFPGRYFAGDGAKRD
                     QDGYWWVLGRVDDVMNVAGHRIGSMEIESALVDHPAVAEAAVVGKHHELKGQAVSAFV
                     TLKEGTAPSPELRDDLRDHVATKIGAIARPDD"
BASE COUNT         1777 a         3849 c         3979 g         1783 t
ORIGIN      
        1 gcggactgga cccgttcgat ggcggcatca cgagcatcgc gcacggtgtt ccacactcga
       61 agcacccgct ccggcggctt gggtccggta taccccatcc aggtctgatc ggcgaaaacc
      121 gtgcccaggg agggcccgcc ccacagatcg atcagcacca cctggtcggg ctccagagcc
      181 cggtcccgac ctgctaccgg cgcgtagtgg ggatcggcgg cgttaggccc gaacccgacg
      241 atgggcgggt gatcgaactg gagaccggcg gcgtgaatcg cgtcgaccac ccgccgctgc
      301 acggcgctct cggtgatgcc cgaattggcc tcgcgggtca cccgctccag ctcggctcgg
      361 gcgatgcggg agagcgcctc ggccgcccgg agatggccct cggtctcctc ccggtcccag
      421 cgggcggcaa actgggtcac caggggcgca ctcgacacga ccgtcgcgcc gagggaggtg
      481 agcagctcca ccacgccatg cggcacccgg tcgagatagg gcacgctgtc cagcggcgag
      541 atttccatcg ccacggtctt gcctccgacc acctgccgca gcgcctcgtg caattcctgc
      601 caccgggcgt agggcagaac cgggccggga aaatctcgga gcggactgag ctcgatctta
      661 tgggccaccg ccaccatttc gccttcgcgc gggatcaaca cgaagagccg ccgggtgccc
      721 atgccgccca gtcccagtac ccgttgcgcc accgggttca atccgcggaa gtcgaagagg
      781 agccaggcgt cggctccggc ggcatcgagt ccccgatgca gcgcggctcg atccagttcc
      841 tgcgagatca ttcgtagccc tccacggccg cggcccgcca gtagcaggtg ttgtcgccct
      901 tggcacgaca ccgatcgtgc agcatcgcgc cctcgaatcc gctcagcacc cgcagcagct
      961 cggcgaagac cgcaccatag aaatagcacc cgtcgccgtc ggcgccggcg cggctcgcca
     1021 gcgactccgg aagccggacc tcggccagcg gtcctaacgg ccggagttcg gctccgaaca
     1081 gtcgccgagc cacccgggcg gcgagccgtc gacccaggcg ccggcggatg ggccggggac
     1141 tggccttgag cagcgtctgg ccccccgcct gcctggcagc ataacgggcc gctcgccggc
     1201 cggcatcggc gtacaccaac tgcgcatcgg gccgccggga caccagccgg aaaaccgaca
     1261 cgacttcgtc catgctgatg gcgtcgccgt gctccgctgc gtcgcggtat cgttcgatct
     1321 gcgacgccac ggtcgtgctc aaccccagtc gcttggatat cagttcggga gccagctcgg
     1381 aaaggccgtc atcaatgggt gtgtcgagat tccgcagggc ctcgaggagg ctcagcggga
     1441 gaatggcgtg cgcgctgtcg ggggacacat cgcaaacgta gtgtggagcg tggtaacatg
     1501 gaactgatct ccctcacact tgcggctgcg ctgtccgccg gcatctcgtt cgccggtgtg
     1561 gccgcgcggg cccttacacc cctggctggc ctgttcgcct tcctgatcgg cctgtcggtg
     1621 atcgctggca ccggctgggc cggcgccctg gcgctgggtg cgttcttcgt ttcgagcagc
     1681 gcggtgtctc gtctcaccga gcggagccaa cccgcgtggg tcgatgccaa ggcgaaccgg
     1741 cgcgatccct ggcaagtgct tgccaacggc gccatggccg gagtgggtgg cgtggtcggc
     1801 atcctggtcc atccgtcact gggtatgtgg atcgcggtgc cggctctggc cgcggccggc
     1861 gcggacacct gggcgacgtc cattgggatg ttgagccgac gagatccgat acacctggtt
     1921 gagcgccggc gcgtgcccaa gggcacctca gggggcgtct ccctgattgg aaccgcgggc
     1981 ggtgtggcgg gctcggtcct ggtggcctcg agcccgctcc tggccggtgc gcctctggct
     2041 ctcgcccggt ttgcggtcct gattggcgcg gtcggaatgg tggcagattc cttccttgga
     2101 gctaccgttc agggtcgatt cgaatgtcca gcatgcggcc agcccagcga acgccgtcgg
     2161 catcgctgcg gaatgccgac gcgacacgtg ggaggtgtac gatggcttgg caacgatggg
     2221 gtgaatctgt tggccacggt cttggccggg ttggccggct gggcctggtg gctggtctgc
     2281 tgctcgggct gagtgcctgc gaaggccagc gcgatctctt tggcccttcc cggccgctgg
     2341 gccagggtag caacacctcg aacagccccc tggtgggcac ctgggaggtg accctcatcg
     2401 tcagcgtgga tggcgacctg cagacctgga ccacgaactg gcagttccga tcggaccgta
     2461 cctgcacctg gcggcagatc atcgagtcgg cggttgaagg tctttccagg gaagaagtcc
     2521 gcgactgcac ctggaccgac gccaatagcg ccgtcacagt ggtgtacttg gacaccggag
     2581 cgagcgagac gctgccctac tcattcccca cgttcgatac ctcccggctc atcctgcagg
     2641 gggtcgagta ccttcggctg tagcgatgca gcccgccgac ctcctcgtcg ttggtgcggg
     2701 gccggcgggc agcgccaccg ccattcgagc ggcccgggcc gggctctcgg tggtgctggt
     2761 ggatcgggcc cgattccccc gtgagaagat ctgcgccgaa tacatgagtc ccgagacgct
     2821 tcggcatctg gacctgctcg gcgtgctggc ggagatcgat caggcggggg ggatgccgct
     2881 ggcgggaacc acggtggtcg gcccccgagg gtcgcgactg accgggctct tcgaccgggc
     2941 cggttcccgc ccgttccggc cgaccggact ctcgcttccc cgccgggtgc tggacgattg
     3001 tctgctgcgg gcggccgggg cggcgggggt caccgtcctg gagggccgga cggtgaccga
     3061 tctattgtac gacgagggcg cggtggccgg cgcggcggcc cgggaccagt ccggccaggt
     3121 cgagctgctt cgttcgcggc tgacggtcgg tgcggacggg cttcgctccg tcgtcgccgg
     3181 gcggctgggg gtccggcatc acgggttccc tgcccgggtg gctttcgtcg cgcacgtcgc
     3241 cggggtgctg ggcttgagcg accgagccga gatgcacgtg ggccagggcg gttacctggg
     3301 gctgaatcct ctcggacccg acgtgaccaa cgtggcgctg gtcgtcgctc gcaagcacgc
     3361 cgcggcggcc cggggcgatc ccaccgggtt tttcgcccaa ggcctcggtc gcttcgaggc
     3421 ggttcgggat cgggtcgacc cccgtcggat cgtgcgcgag gtgctggtga ccggaccctt
     3481 cgcggcccgg gcccgccgcg tcaccgccgg tggcgccctg ctggtgggcg acgccgccga
     3541 tttcttcgat cccttcaccg gcgaaggcat ctgcagtgcg ctcaagggtg ccgagctggc
     3601 cgcgaccacg gcggtcgcgg cactggcctc gccgggacgg gtgagccggg agcggttgcg
     3661 gggctatgag gcggcccgcc gggtctcgtt tcgcggcaag tgggcggtgg agcggttgat
     3721 cggctggggc atgctggtgc cggcgctgtt cgatcgcgcg atcggccggt tggaagcgcg
     3781 gggctgggct cataccctga tcggcgtgac cggcgatttc gtcccggccg gcgcggtcct
     3841 caatccccgt tttctcagcg gaatgctctg gtaacgtgtc agacctcgat ccggcggtgt
     3901 tccgacagct gtgcggccga ttcgccaccg gcgtcgtggt cgtcaccacg ttgagcgacg
     3961 acgggcgccc ggtcggaatg accgccaaca gcttcacctc cgtatcgctg gtaccgccgc
     4021 tggtgtcggt gaacgtcgat cacgccgccg ccatgcacgg acacgtgagc cgggcgcccc
     4081 gctttgccct caacattctc gagagccggc aggaggccct gtcccggcgg ttcgccgagg
     4141 aggttcccga ccggttcgat ggaatcggct atcgggtgag cgatgcggcg ctgccgctgc
     4201 tggacggcgc gctcgcgatt ctcgaatgtg aacggcacac cagcttcgaa gccggtgacc
     4261 acaccatcgt gctgggccgg gtcctgagcg ggctggtaaa tgaaggtcgc cccctgctgt
     4321 attatcgggg cggctactac gatttgcctt catgagccgg ctggcgcggt cgcagaccgg
     4381 gaccgaaatc ctggatgatc ccggggccga tccccgcgcg gtgggtctat cgctggaaaa
     4441 catcgcccgg tccaatcgct ggttcggtgg cctggcggcg gtgcgctacg ggctcgagcg
     4501 tttgctggcc gggctgcgcg gccggatcac tctgctcgac atcggcaccg gcaagggcga
     4561 catcccgctc tgggcccgtc gctgggccgg ctcgcgcgac ctcgagctgt tcccgatcgg
     4621 cctggatcgg cacccggtcg cggcccggct ggcggcccgg cacggcgtca gcaccattct
     4681 gggatgcggc ggcgacttgc cggttcgctc gcgcggcgtg gacatcgtgg tggtgagcca
     4741 ggtggcccac catctggacc ccaccagttg tgtcaccctg ttccacgagt gcaaccgggt
     4801 cgcccgggtc ggcgttgtgc tggccgatct gcgccgctcc cgccccgcgg ctgcgggatt
     4861 ctggatcggg agccggctgc tcggattcga tccggtcacc cgggccgatg ggctgacttc
     4921 gttgcggcgc ggcttcaccg cagccgagct tgcagcgttg ctccggcaaa gcggaatcga
     4981 gaccccggtg gtgcggcgtc ccggagcccg gctggtggcc gcctggcgaa ccggtcggtg
     5041 atgcggatcg tcgacgagat cgatgtccgc gcttctccgg agcgggtctt ttcgatcgcc
     5101 gcccaggtcg agcgctggcc ggagattctg ccccactacc gccgggtccg cctgcgggag
     5161 cgcaccccgg aacggtcggt ggtggaaatg gcggcctggc gtccctttcc gggcttcagc
     5221 tggcccacct ggtgggtgtc ggaaatgtgg atcgatgccg cccggcggca ggtgcggtac
     5281 cggcacctcc tcggcgtcac ccgggggatg aaggtggtct ggcgggtcga accccgcccg
     5341 ggcggggccc acatcaccct cattcacgat tgggacggac cggcgtggcc gctgatcggg
     5401 cgaccggccg cgcggtggat cattctcccc gtcttcgtgc acggcatcgc gtctcgcacg
     5461 ctggccggcg tcaagcgccg ggcggagagc actcatgcat aacgggcggc gggtggtggt
     5521 gacggggatc ggcgtcgtca cgccgatcgg caccgggatc gatcccttct gggccgggct
     5581 ccgggcccgg cggtcggcgg tgcggaccct cacccggttc gatccggcgc cgttccgcag
     5641 ccatgtggcg gccgaggtcg acggcttcga tccggcggac tggatggagg ccaagcgggc
     5701 caaacggttg gatcggtgca gtcagttctc gctggcggcg gcgcggctgg cgctggccga
     5761 cgccgacctg gacctcgggc gggaagaccg ggatcgaacc ggtgccatga tggggacggc
     5821 gttaggcggc gtctcgctgg ccgagcggga acacggacgg tttctggccg aaggcctccg
     5881 cgcgatcgat cccgggttgg cgctgacagt gttcgccggg gcctcgagct gcaatctggc
     5941 gatcgagttc ggtgtgaccg gccctaacag caccaacggc atgagctgcg cctcgggcac
     6001 gatggcggtg ggcgacgcct tcagggccat tcggggcaac gaggccgatc tgatgctggc
     6061 cggcggggcc gaggccccgt tggccccgct cacctacggc gccttcgcca tcatccgcgc
     6121 catgtccacc cggaacgacg acccgggcac cgccagccgg cccttcgacc gccatcggga
     6181 tggcttcgtg atggcggaag gggccgcggt gctgctgctg gaagagcgga gtcgggccct
     6241 ggcgcgcggt gccagggtgt atctggaagt gtgcggctac ggcttgacca atgacgccca
     6301 ccacatgacc gcgccccgtc ccgacggacg ccaggcggcg cgggccatgt cactggcgct
     6361 taacgacgcc cacatccagc cgtccgaggt ggaatacgtg aacgcgcacg gctcgtccac
     6421 cccgctcaac gatgccaccg aaaccctggc gatccggcag ttcttcggcg atcacgccga
     6481 ccggctggcg gtgagcggga ccaaggggta ctacggccat gccctgggcg cgagcggcgc
     6541 catcgaagcg gccatctgcg ccctggcgag cgcccggcgc tggctgccgc ccacggtcaa
     6601 cctttccgat cccgatcccg cctgcgatct ggattacctg gcgcgggacg ggcgcgacgg
     6661 cgatccggag ttcctgttgt cgaattcgtt cgggttcggc gggatcaatg cggcgttggt
     6721 cttcaagcgg gcgtaggcag cccctgtctc ctccctcctc acgccgatgg gtcgcacagc
     6781 gctcgaactc cacctgacgg cggccgagtt cgcgcatcaa gcgggtttat tggcgacaga
     6841 ctgcggatga attcgtcagg ggttatccgc cgaagccgct gatcgctcca ctctccttac
     6901 tccctacgaa gagccgtcct cgcccgccga agcaggctga gcgcataccc caggatcacg
     6961 accccgacaa tcagataggc ggcgatcatg tagccgccgt tgtccggcgg gctagtctgc
     7021 atcggcggct ccgcgggctt cccgcatcag gcccagccca taccgggtca tggcgaagcc
     7081 gacatacagg agcgtgaaca ccgcgatcga ggtgagcagg gtgcggagca tcggggccgg
     7141 catggaagga gcgctgggct tgagcaggac cggctgggga tgcagcgtgc ggaagaggta
     7201 cacgctcaga tgcacgaacg gaaccagcat cagtcccagg atccccacca ccgcgctgta
     7261 tcgggcccgt tcggccggat cggagagcgc gccgcgcagc gcccggtatc cgacgaacag
     7321 gaacaccagc agcaacgtca gggtgagccg ggcgtcccag gtccaccagg taccccagat
     7381 cggtttcccc cagatcgggc cggtggtgag catgatcagg ccgaagacca ggccgacctc
     7441 cgccgacgcc tcggcgaaga ggtccagccg gggatcgcgc agccagagat agagcccgcc
     7501 gcacacgccg accagcgcaa acgccagcat cgccgcccag gccgccgggg catggacata
     7561 gaagatcttc tgcgccagcc cctggcgtac ctcgatgggc gtgaagcgat gggccagcag
     7621 gtacaccagc gccaggccca gcagtcccac ggtgctcagc agcaggcccc gccggatggt
     7681 ggcggccgcg ttttcaggag tcggcgtcat tcgtccagaa gcgacgggaa caccatcgca
     7741 cacacggtga ggaaaaccac atcgtagacg ccgaggattc taagccaccc ggcctgctcc
     7801 aacaacggcc ggccggccag cagccgggtg gtcacctgga ccgcgccgat caccggcgga
     7861 accaggaagg gcagcagcag caccgggagc atcaggtcgg cgaaccgggt tcgcaccgcc
     7921 atggacgcga acacggttcc caccgcgacg aacccgagcg tgcccaggac ggtcaccagc
     7981 aggaggcccg gcagcgcgcc gcccagtccc acgttgaaga acaggacgaa cagcggcaag
     8041 gtcaccgcct ggaccgtgac gacgaagccg aggttggcga agtacttccc caggaagatg
     8101 gcgcctcgcg ggacgggcga gagcagcagc ccatccatgg cgccgttctc cttctccagc
     8161 gcaaaggagc ggttgaaggt gagcatcgcc gcgaaggtga acgtcaccca gagcacgctg
     8221 ggggccaggt cccgggacga gacggtcgtg ggatcgcggg cgaaattgaa gatcaccagc
     8281 accaaggccg cgaacgcgat ggcggagacc agggcggtcc ggctgcggag ctccactctc
     8341 aggtccttgg ccgccagcgc cagggcgtgc cggaggacct caatcactga acgcctcctg
     8401 cacccgcacc atgaaccggt cccggtccgt gggtcggggc tcgtcgatca cccactggcc
     8461 ccggaccagc accgagatcc gggtcgcgac cggccagata tcgtagagcg agtgggccac
     8521 caccacgaca gcagtcccgg cggcaagctg ctcttccagc aggcgtacca gccggtccgc
     8581 agcgcgggga tccagcccgg tgaagggctc gtccagcagc aggatccggg gacggtgcag
     8641 cagggcccgg gcgatcgcga cccgctgcac catgccgcgc gagaggcgcc gcaccggatc
     8701 cgcgctccgc tgggccagtc ccactgcgtc gagcgccgcc atggcgctct gatccggcgc
     8761 cttcaggcca tagagccggg cgatgaaggt gaggttctct cggggggtaa ggtcgtcgta
     8821 gagcaggctc tggtgcgaca gcaggccgat ctcgcgtcgt agtcgaggcg tgttgcggag
     8881 cgaatgaccc agcaccagaa cctggccgct ggtgggccgg gtcaagccgg ccaggattcg
     8941 caacaaggtg gtcttgccgg ccccgttagg cccgagaatg acctgcaacg acccggtgcc
     9001 ggcgctcaga gccaccccgc gaaggacccg cgccgcgccg aaggttcgct ggataccggt
     9061 agcttctagg aggggtgcgc tctcaggcac gctctaatac tagtcgcgcg ccgctgctgg
     9121 ctggatcgcg acggcccgcc cgcccggcta ttccatttcg aagagatcga tcagcttggt
     9181 cagcgcgagg agaaaacgga tctcatcgct gatgttgcgg agtgcgacga tctggcggcg
     9241 ttctgcggcg cgacgctgca ccagcatgag agcaccgagc ccggcggagt ccacccgact
     9301 ggtcttgtcg aggtcgacca cgagacgacc gagcccctcg ggcaattcct ccagcatggc
     9361 gacggcttcc tgtcggaagg gggcgcgtgt ctcgagtccc agggtctccg gtgcggtcag
     9421 cacccgctcg gtggaattgg ccatagtcat cgcacctgag gaaaggcgaa accggtgcca
     9481 gccggatcgc ccaagcgacg caacggctta gcgttggacg ccacacccgt tgcccagatg
     9541 ccacggtgcg ctccgcgata cccaacggcc aactgcgagg atagaatcag gtccatgacc
     9601 gatcagctcg ctaccctgct taccgaagag cggcgctttc cgccgccacc gagttttgcc
     9661 gcgcaggcca acgccacgga cacgctctac cagagcgcca gccgggaccg gctggccttc
     9721 tgggcggagc aggcgcgcga gctcgactgg tatcatccct ggacccaggt cctggaatgg
     9781 accccacccc acgccaaatg gttcgtcggc ggaaagctta acgtgtcggt caattgtctg
     9841 gaccggcatc tggccggcgc ccgccgaaac aaggccgcca tcgtgtggga aggcgagccg
     9901 ggcgaccgcc gtaccctcac ctactgggag ctggcccggg aagtcggacg cgcggccaac
     9961 gcgctccgcc gcctgggggt cggcaaaggc gaccgggtgg cgatctacct tcccatgatc
    10021 cccgaagccg cgatcgcgat gctggcctgc gcccgcatcg gcgcggtgca ctcggtcgtc
    10081 ttcggcggct tttccgctga gtcgctgcgc gaccggatca tcgatgccca ggcggtggcg
    10141 gtcatcacgg ccgatggggg ctatcgccgg ggccaggtcc tgccgctcaa gcgattcgcc
    10201 gaccaggcgg tcgaagggtg tccttcggtc aagcacgtgg tggtggtgcg gcggttggga
    10261 ggagccgagg gggatgaaag cttcaccaac atgcgggaag gccgggacca ctggtggcac
    10321 cggctgctcg acggcgagac cccccaggcc acgcccgaga tgatggacgc cgaggacatg
    10381 ctcttcatcc tctacacctc gggcaccacc ggcaagccca aagggatcgt gcataccacc
    10441 ggtggatacc tcacccaggt gaccagcacc accaaacatg tcttcgacct caaggagaac
    10501 gacgtcttct ggtgtaccgc cgacatcggc tgggtgacgg gacactcgta cgtggtctac
    10561 gggccgctgg cgaacggcgc cacggtgctg atgtatgaag gcgcgcccga ttggcccgat
    10621 cgggaccggt tctggaagat cgtggcccgc ttcggcgtca ccgtgttcta caccgccccg
    10681 acggtcatcc gggcctgcat gaaatggggc ccggggtacc ccgaccggca cgatctctcc
    10741 acccttcgcc tgctaggcac cgtcggggag ccgatcaatc ccgaagcgtg gatgtggtat
    10801 cacgagcata tcggcgccgg gcgctgtccc atcgtcgaca cctggtggca gaccgagacc
    10861 ggcggcatca tgatcacgcc cctccccggc gtggtcacca ccaaacccgg ttccgccacc
    10921 atccccttcc ccggcatctc ggccgagctg gtcgacacca agggacagcc gatcgaaacc
    10981 ggcggcggat tcctcaccct gaccgagccc tggccgggga tgctccggac catcttcggg
    11041 gacgacgaac gctaccgcga gacgtactgg agccggttcc ccgggcgcta cttcgcgggc
    11101 gacggcgcca aacgggacca ggatggttac tggtgggtcc tgggccgggt ggacgacgtg
    11161 atgaacgtgg cgggccaccg gatcggctcg atggagatcg agagcgcgct ggtcgatcac
    11221 cctgccgtgg ccgaggccgc ggtggtggga aagcaccacg agctcaaggg tcaggcggtg
    11281 tcggcctttg tgaccctgaa ggaaggcacg gctccgtcgc ccgagctgcg ggacgacctc
    11341 cgggatcacg tcgccaccaa gatcggcgcc atcgctcggc cggacgac
//
LOCUS       DASWKS010000430         4136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3534855, whole genome shotgun sequence.
ACCESSION   DASWKS010000430 DASWKS010000000
VERSION     DASWKS010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3534855"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /gene="arsB"
                     /locus_tag="VGA78_12260"
     CDS             complement(<1..938)
                     /gene="arsB"
                     /locus_tag="VGA78_12260"
                     /inference="COORDINATES: protein motif:HMM:TIGR00832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HEX9894693.1"
                     /translation="MSADIKRMNVFERYLSLWVALCMVLGVLIGKSLPGLVEAVRALE
                     FGEGSHINAPIAVLIWLMIYPMMLRIDFASIRSVGKRPAGLFVTLFVNWLVKPFSMAF
                     FGWLFFHHLFLPLIGEELASQYIAGVIILAAAPCTAMVFVWSYLADGDPAYTLVQVSV
                     NDLIMLVAFAPVVKLLVSGASGLHVPFEVLLYSVIIFVVIPLAAGSISRSMLIARKGL
                     EWFETRYVALFAPFTVLALLTTLVLIFAFQADNITTRWFHVVLIAIPILIQVYFNSSL
                     TYGLMRLFRVPYSVAAPGALIGASNFFELAVATAIA"
     gene            complement(969..1364)
                     /locus_tag="VGA78_12265"
     CDS             complement(969..1364)
                     /locus_tag="VGA78_12265"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9894694.1"
                     /translation="MASSQLPDLVLVYKALAHPARIRILAMLRTGELCACQITAVLAL
                     APSTVSAHLAELRRAGLIAERKEGRWVHYRTAEREDAAEIGEWLWQRIKRDPQVRGDT
                     RTVKQLRAVPVEELCRADLDLARVAVRRG"
     gene            1504..2961
                     /locus_tag="VGA78_12270"
     CDS             1504..2961
                     /locus_tag="VGA78_12270"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX9894695.1"
                     /translation="MTSRVTLIILDGARPDVFRQLADRGDLPNLSRHLLDAPGGGTAS
                     ATTVFPSTTGVAYLPFLTGCYPGTCDIPGIRWLDRRRYRGRWWRDREYVRSYCGYQRD
                     RFDRDLPAGVVSMFDLEPDSVALCTPFTRGLGAGREGVRRARALWGGLAHYTRGYGML
                     ERAVGAALVESAPRRHRFSFVVFPGVDGITHCYHPEHPRVLATYREFDRMFGEFVAAA
                     GGNGGPDPDHLILVASDHGLSTVARHTDIALALEHLGIPTLRHPFHLWRRRPGAAVMV
                     SGNASAQVYFHPGAPRRERYPVSALEAGLDGVPPRIASRLAELPGVALVAGTEGADVV
                     VVGCEGRGRLSRAGAGLIDWCPDGGGGDGGWGDPLDLGGPGTRHQREWLALTHRGPFP
                     DAPMQLLQLFRSERTGDLVVIAAPGTDLRADWEIPEHRSGHGSLHGEHMRCLVAANRP
                     LPEPIRTVDLFPLMLQHLGHPIPEGIDGTAPFSPP"
     gene            2958..3608
                     /locus_tag="VGA78_12275"
     CDS             2958..3608
                     /locus_tag="VGA78_12275"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEX9894696.1"
                     /translation="MSAWTQLTRRRGNPAWDGVIRASGVLAILGIAVTLMGSDEAGGL
                     VGFTIVTVWVNGPIGIFLPATYEPILMLFGTIYPPLLIGLFGIAGTLYIEGLNYFVYQ
                     RLLKTRALAPARDGALIRRLTRLFERAPFFTVWMCSWSPVPYWTVRIMAPLAGYPVSR
                     YLVATFLGRFPRLWFFAWLGPALRLSTGTLALVAGGSIVLFVTIFLLRREKADWIG"
     gene            complement(3657..3729)
                     /locus_tag="VGA78_12280"
     tRNA            complement(3657..3729)
                     /locus_tag="VGA78_12280"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3694..3696),aa:Asn,seq:gtt)
BASE COUNT          694 a         1410 c         1349 g          683 t
ORIGIN      
        1 aaggcaatcg ccgtggccac cgccagctcg aagaaattgg atgccccgat caatgcgccg
       61 ggggccgcca ccgagtacgg cacccggaac agccgcatca acccgtaggt gagcgacgag
      121 ttgaagtaga cctgaatgag aatcggaatc gcgatcaaca ccacgtggaa ccaccgcgtc
      181 gtgatgttgt cggcctggaa ggcgaagatg agcaccagcg tggtgagcag ggccagcacc
      241 gtgaagggtg cgaagagcgc cacgtagcgc gtctcgaacc actcgagccc cttgcgagcg
      301 atcagcatgc tccggctgat cgagccggca gcgagcggga ttaccacgaa gatgatcacg
      361 gagtagagca gcacctcgaa cggcacgtgg agcccggacg cacccgagac gaggagcttc
      421 acgaccggcg cgaaggcgac gagcatgatg aggtcgttca ccgacacctg taccagcgtg
      481 taggccggat cgccgtccgc aaggtaggac catacgaaca ccatcgcggt gcacggcgcc
      541 gccgcgagga tgatcacgcc ggcgatgtat tggcttgcga gttcctcgcc gatcagcgga
      601 aggaagaggt ggtggaagaa cagccagccg aaaaacgcca tcgagaacgg cttcaccagc
      661 cagttcacga acagggtgac gaagagcccg gcgggtcgct tccccacgct cctgatcgac
      721 gcgaagtcga tcctgagcat catcgggtag atcatgagcc agatcaggac cgcgatgggc
      781 gcgttgatgt ggctgccttc gccgaactca agcgcccgca ccgcctccac aagaccgggg
      841 agcgacttgc cgatcaggac ccccaggacc atgcacagcg ccacccacaa gctcaggtag
      901 cgctcgaaga cgttcattcg cttgatgtca gcactcatgg cgttgtctca ccggccgggg
      961 gcgccatttc agccccgtct gactgcgacc cgcgcaaggt cgaggtccgc gcggcagagc
     1021 tcctcgaccg gcacggcgcg gagctgtttc acggtccggg tgtcgccccg aacctgtggg
     1081 tcccgcttga tgcgctgcca caaccactcg ccgatctccg cggcgtcttc ccgctccgcg
     1141 gtgcggtaat gcacccagcg cccttccttg cgctccgcga tcagtccggc acgccgcagt
     1201 tcggccaggt gggcggacac ggtggacggg gcgagcgcca gcacggcggt gatctggcag
     1261 gcacacagtt ccccggtccg gagcatggcg aggatgcgga tccgggccgg gtgggccaag
     1321 gccttgtaga ccaggacgag gtcgggaagc tgggagctgg ccatttcgtc gtttggcgaa
     1381 atgtagaaca gtcactcatt cggtgtcaat cgtggctgcg atcgcgcatg cgcgagggcg
     1441 caatcaacga tagccggatt ggcccctgcc ggtgcgccgg gtagcttcgg gaacccaatg
     1501 acaatgacca gcagagtcac gctcatcatc ctcgacgggg cccgccccga cgtgttccgc
     1561 caactggccg accggggcga cctgccgaac ctatcgcgcc acctgctgga cgccccgggc
     1621 ggagggacgg cctccgcgac cacggtcttc ccctcgacaa cgggggtggc ctacctgccg
     1681 ttcctgaccg gctgttaccc cggcacctgc gacattccgg ggatccggtg gctggatcgg
     1741 cgccgctacc ggggccgctg gtggcgggac cgcgagtacg tgaggagcta ctgcggctat
     1801 cagcgcgatc gcttcgaccg cgatctgccc gccggtgtcg tttcgatgtt cgacctcgag
     1861 cctgacagcg tggcgctctg tactccgttc acccgcggac tcggcgccgg ccgggagggg
     1921 gtccgccgag ccagggcgct gtggggcggg ctggcccact atacccgggg ctatggaatg
     1981 ctggagcgcg ccgtgggcgc cgcgctggtc gagtccgctc cccggcgcca ccggttcagc
     2041 ttcgtggtct tccccggggt ggacggcatc acccactgtt accacccgga acacccacgg
     2101 gtgctcgcga cctaccggga attcgaccgg atgttcgggg agttcgtggc agctgcgggg
     2161 gggaatgggg gccccgatcc ggatcatctc atcctggtgg caagcgacca tggactctcg
     2221 accgtcgcgc gccacaccga tatcgccctc gcgctcgagc acctgggtat cccgacgctc
     2281 cgccatccct tccacctctg gcgccggcgc ccgggtgccg ccgtcatggt ctcgggcaat
     2341 gcctcggctc aggtctattt tcatcccggc gcaccacggc gggaacgcta cccggtatcc
     2401 gccctcgagg ccggactcga cggtgttccg cccaggatcg cgagccggct ggcggaactt
     2461 cccggtgtgg ccctggtggc tgggaccgag ggtgccgatg tggtcgtggt agggtgcgag
     2521 gggcgcggcc gcctctcccg ggccggcgcc ggcctgatcg actggtgccc cgacggtggg
     2581 ggaggagacg gtggctgggg agaccccctg gacctcggcg gacccgggac ccggcaccag
     2641 cgcgagtggc tggctctgac ccatcggggc cctttccccg acgccccgat gcagctgctc
     2701 cagctgttcc ggtcggagcg caccggcgac ctcgtggtta tcgcggcccc gggcaccgac
     2761 ctccgggccg actgggagat cccggaacac cggtcggggc acggttcgct gcacggagag
     2821 cacatgcgct gtttggtggc tgccaaccgc cccctgccgg aaccgatccg cacggtggat
     2881 ctgtttcccc tcatgctgca gcacctcggg cacccgatcc cggaaggcat cgacggcacc
     2941 gccccctttt ccccgccgtg agcgcctgga cccaactcac ccgccgccgc ggaaacccag
     3001 cctgggacgg cgtcatccgg gccagcgggg tgctcgccat cctgggaatc gccgtcaccc
     3061 tgatgggctc cgacgaggcc ggcgggctgg tcgggttcac catcgttacc gtgtgggtga
     3121 acggaccgat cggcatcttt ctgccggcca cctacgagcc gatcctgatg ctgttcggca
     3181 ccatctatcc tccgctgctg atcgggctct tcggcatcgc gggcaccctc tacatcgagg
     3241 gcctcaacta tttcgtctat cagcggctgc tcaagacccg cgccctcgcc ccggcccggg
     3301 acggtgcgct gattcgccgg ctgacccggc tgttcgagcg ggcgccgttc tttacggtgt
     3361 ggatgtgcag ctggtcgccg gtgccctact ggaccgtgcg gatcatggct ccgctggcgg
     3421 gctacccggt ctcccgctac ctggtggcca ctttcctggg ccggttcccc cggctctggt
     3481 tcttcgcatg gctgggaccg gcgctccggc tctccaccgg cactctggcc ctggtggccg
     3541 gcggctcgat cgtgctgttc gtgacgatct tcttgctccg gcgggagaag gcggactgga
     3601 tcgggtgagc cggcgtcgaa gccatcaaac ccgttgtccc ggttggcttt actgaactcc
     3661 cgaggcagga ctcgaacctg cgacccgctg attaacagtc agctgctcta ccaactgagc
     3721 tactcgggaa aacgcgccgt aggatacccc agcgcgcccc ctcggtcaat cggattccaa
     3781 cccaatattg attcgccgca cctagaatgg ctttgactac accggggacc cgcatttaca
     3841 gaatacttga cagatcaact aatgacatgt aacttacatc atgaccactt cgtccaaggt
     3901 cggccgggag atcgggcaac gggctccctt tcgaaaccca gcgcaggagg ccgtgataag
     3961 cttgctccgc acgaccgata tggccgccga ccggatcggt ggcgtgatca ccccccacgg
     4021 aatcacgccc caacagtaca acgtgctgcg gatcctgcgg ggcgccggac gggaagggct
     4081 caacacgctc accatcgccg aacggatgat cgagcgcgcc ccaggcatca cacggt
//
LOCUS       DASWKS010000431         3570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2815771, whole genome shotgun sequence.
ACCESSION   DASWKS010000431 DASWKS010000000
VERSION     DASWKS010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2815771"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..704
                     /locus_tag="VGA78_12285"
     CDS             153..704
                     /locus_tag="VGA78_12285"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX9894697.1"
                     /translation="MPDLVRRWTREEVLALPDDGNRYELFDGELLVTPAPSGMHQVAL
                     MRLSEALVPYIRRHRLGEPLMSPADLDLGGEQLSQPDLFVVPFLPPGRDWSNFPSPIL
                     IVEVLSPSTARADRTVKRRRFQRAGIPEYWIVDLDARAIERWRPADERPEILDERLIW
                     QPEAAASALELDLPTFFRGVWGD"
     gene            complement(820..2319)
                     /locus_tag="VGA78_12290"
     CDS             complement(820..2319)
                     /locus_tag="VGA78_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894698.1"
                     /translation="MAWRFYEEGLRAFFAPDWQVAKRMMGAALKEDSTFALAAYYDAV
                     MTEDAAYEARQRALRLARGAPERDRLMILADLLQKDQEPAALAAAEDWTAKYPDDAQA
                     FATLGSTRAFAGDWAGAVAAFERAILLDLEAERTVPEGCRVCDGYGRLADLYFWWDSL
                     PAVERTARRHLDAHPDQPLPWATLALAAARAGDSASALQHLRHYVAATATRPDKGHEL
                     RIRLTLEDYEVVEREALPLLASSREDDASMGRWLLLIALRNQGRLTEAAHLLRTGQLR
                     GETPSLVPVGVDYINQALVALESGDPSRAASYFDTRRRGEPRAQAPGLHARWRAWNST
                     LTATALAAVGDTLAVRQLADTVQYWGERSLFGRDRKAHHFLRGLVLAAAGHHDEAVRE
                     YRAAVHSYTLGYTRVNYELARSLLFLDRPSEAVAVLLPALRGEIDAANIYVTRTELHE
                     LLARAYRRAGLPDSAAAHDRAVVRAWARADRRFISRRQAARQRLTCCMG"
     gene            2647..2787
                     /locus_tag="VGA78_12295"
     CDS             2647..2787
                     /locus_tag="VGA78_12295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894699.1"
                     /translation="MIVFIPRNAPSLFNLHALESLFWDGRVSTDGEGVFHTPAGSQLT
                     AE"
     gene            2859..3269
                     /locus_tag="VGA78_12300"
     CDS             2859..3269
                     /locus_tag="VGA78_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894700.1"
                     /translation="MSDNLFHNVAVAQFGPGQGDGPSTHDDFGRMRVTGDPADQYRFR
                     TTPLRNVEFTGPYGHDGAFFKLREFVEHYSESHLKLRSFDPLSLELLLQATLLDNADA
                     ILATRDVILDGVVLPSEVVDQLTAFMGALTDPRA"
     gene            complement(3279..>3570)
                     /locus_tag="VGA78_12305"
     CDS             complement(3279..>3570)
                     /locus_tag="VGA78_12305"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX9894701.1"
                     /translation="EDGDDVPTATANVEVQDDQFVRAAVRVLEGGTVHWTWRGGNQHN
                     VTFTGGPASATQTNGTYQRTFETAGTFSYICTIHGQVMSGTVTVVADAPVAP"
BASE COUNT          531 a         1226 c         1215 g          598 t
ORIGIN      
        1 ctggagggtg gacctcaggc cgtgcggtct ccatcctatc gctcgttcgt accgtttcgc
       61 gtaaatccgg ttccatgagg agcggttgat gttcatacag atggaggcat ggccacttgc
      121 ctctctctta ccgccgagcg tagcgtatgg gcatgccgga tctggtcagg cgctggaccc
      181 gcgaggaagt gctcgccctt cccgacgacg gaaatcggta cgagctgttc gacggcgagc
      241 tgctggtgac tccggcgccg tcgggcatgc accaggtggc gctgatgcgg ctatccgagg
      301 ccctcgtgcc gtacatccgg cggcaccggt tgggcgagcc gctcatgtca cccgccgacc
      361 tcgacctggg cggcgagcag ctctcccagc cggatctgtt cgtcgtgcct tttctgccgc
      421 cgggccgcga ctggtccaac ttcccgagcc ccatcctgat cgtggaggtg ctctccccct
      481 cgaccgcgcg cgccgatcgc acggtcaagc gccggcgctt tcagcgggcc gggattccgg
      541 aatactggat cgtcgacctc gacgcccgag cgatcgagcg ctggcggccg gccgacgagc
      601 ggcccgagat tctcgacgag aggttgatct ggcagcccga agcagcagcg agcgctctgg
      661 agctggacct tcccaccttc ttccgaggtg tctggggaga ctgagacgcc tcgggaatca
      721 cagtctttgg tccctgcggc cccgaagcgc ttatcgcggc caaggaatcg cgggcgagcg
      781 cagggtgatc gtgaccggtt cggccagccg cacgacgatc taccccatac agcaggtgag
      841 ccgttgccgg gccgcctggc ggcgcgaaat gaaccggcga tcggctcgag cccaggcccg
      901 caccacggcc cgatcgtgcg ccgccgcgct gtcgggcaga ccagcgcgac gataggcccg
      961 ggccagcagc tcatgcagct cggtacgagt cacatagata ttggccgcgt cgatttcccc
     1021 ccggagcgca gggagcaaca ccgcgacggc ctcgctcggc cggtccagga acaacagcga
     1081 ccgggccagc tcataattga ctcgggtgta gcctaacgtg taggagtgga ccgccgcccg
     1141 gtactcgcgc acggcctcgt catggtggcc ggctgcggcc agcaccaacc cgcgcaggaa
     1201 gtgatgggct ttccggtccc ggccgaagag gctccgctcg ccccagtact ggacggtatc
     1261 cgccagctgt cgcacggcga gcgtatcccc cacggccgcg agtgcggtcg ccgtgagggt
     1321 ggagttccag gcccgccacc gggcgtgcag gcccggcgcc tgggctcggg gctccccccg
     1381 gcggcgggtg tcgaagtacg atgccgcccg gctggggtcg ccgctctcga gcgcgaccag
     1441 cgcctggttg atgtagtcta ccccgaccgg caccagggac ggggtctctc cccggagctg
     1501 accggtgcgc aacaggtggg cagcctcggt tagccggccc tggttgcgaa gcgcgatcag
     1561 cagcagccag cgccccatgc tggcatcgtc ctcccgggaa gaggccagca acggcagcgc
     1621 ctcccgctcc acgacctcat agtcctccag ggtgagccgg atgcggagct catggccctt
     1681 gtcaggccgg gttgcggttg ccgcgacgta gtgacggagg tgttgtagcg cggacgcgct
     1741 gtcgcccgct cgggctgcgg cgagggccag cgtcgcccag ggaagcggct ggtcgggatg
     1801 cgcgtcgagg tggcggcggg cggtgcgttc gaccgcgggg agagagtccc accagaagta
     1861 gagatccgcc agccggccgt agccgtcgca gacccggcag ccttccggga cggtccgctc
     1921 ggcttccagg tcgagcagga tggctcgctc gaaggcggcg actgccccgg cccagtcgcc
     1981 cgcgaatgcg cgggtggatc ccagggtggc gaaggcctgg gcatcgtccg ggtacttcgc
     2041 agtccagtct tccgcggccg cgagtgcggc cggttcctgg tccttctgga gcaggtcggc
     2101 caggatcatc aggcggtccc gctcgggtgc ccctcgagcc agccggagcg cccgctgccg
     2161 ggcctcatag gccgcgtcct cggtcatgac cgcgtcgtaa tacgcggcca gagcaaaggt
     2221 cgaatcttcc ttgagtgccg cccccatcat gcgtttggcc acctgccagt cgggggcgaa
     2281 gaaggcgcgc aggccttcct cgtagaaccg ccaggccacc gacgatctgg ttgaggcctg
     2341 gggggcccgc cggggttcgc gacctgccgc gctggatcca gactgccccg atgatggcca
     2401 cgattgccag ggccaagcct gccttggcca ccccgcggcc ggcccccccc gcccagcgcc
     2461 taacggggtc ggtttcccgc gtctccggtt cctcaccggg ggcgacggtc tgggccgagg
     2521 tccgggaatt cacgccgcgg ccgtcaggtg ccggctcaga ttccggcatg gcccgcaagt
     2581 ccgcttcgag gcgcgcgata tcagggtcag gctcggcctc gaggtcacgg cgcaccgcgc
     2641 tcgcgtgtga tcgtctttat tccgcgaaat gcgccgtcgc tcttcaacct ccacgcgctc
     2701 gagtcgctgt tctgggatgg gcgggtctcg acggacgggg aaggggtgtt ccacaccccg
     2761 gctggttcgc agttgacggc cgagtgagcc aggcgcagct cctgggggcc cagactttcc
     2821 tctcgatccg ctgctcactc tgccataacg gtcccgcctt gagtgataac ctcttccaca
     2881 acgtggctgt ggcgcagttc ggaccggggc agggtgacgg accctcgacc cacgatgact
     2941 tcggccgaat gcgggtgacc ggcgacccag ccgatcaata ccggttccgg accaccccgc
     3001 tccggaacgt ggagttcacc ggaccgtatg gccacgacgg ggctttcttc aagctgaggg
     3061 aattcgtcga gcactacagc gagtcgcacc tcaagctccg cagcttcgat cccctctcac
     3121 tggagctgct gctgcaggca acgctgcttg acaacgcgga tgccattctt gccacccgag
     3181 acgtgattct ggacggtgtg gtgttgccca gcgaggtggt ggatcagctg accgcgttca
     3241 tgggagcgtt gaccgatccg cgagcctagc ccgcgccttc acggcgcaac cggggcatcg
     3301 gccaccacgg ttaccgtgcc cgacatcacc tgaccgtgga tggtacagat ataggagaag
     3361 gtgccggcgg tctcgaaggt ccgctggtag gtcccgttgg tctgggtcgc ggaagccggc
     3421 ccgccggtga aggtgacgtt gtgctggttg ccgccccgcc acgtccagtg aaccgtgccc
     3481 ccctccagga cccggaccgc tgctcttacg aactgatcgt cctgcacctc gacgttggcc
     3541 gtggccgtcg gcacgtcgtc gccgtcctcc
//
LOCUS       DASWKS010000432         4410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3197630, whole genome shotgun sequence.
ACCESSION   DASWKS010000432 DASWKS010000000
VERSION     DASWKS010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3197630"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VGA78_12310"
     CDS             complement(<1..358)
                     /locus_tag="VGA78_12310"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEX9894702.1"
                     /translation="MAHLTGRARALFRLLGLQATWHYERMQGIGMGHATEPLLRAQFA
                     AEPERFREALARAAGFFNANPYLAPAAVGAEVRAEKDGATPAQVERLRRALSGPLGAL
                     GDRLFWSGLVPALVSAA"
     gene            complement(346..1017)
                     /locus_tag="VGA78_12315"
     CDS             complement(346..1017)
                     /locus_tag="VGA78_12315"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEX9894703.1"
                     /translation="MSEVAALLGLLVWGTIAGVDLVSFPQAMLGRPLVAATVTGLLLG
                     DVELGLRVGILLECFALDVLPVGASRYPDYGPAAVSAVFAAQLLPAQEMIGGAVLLGL
                     IVAVIGGKGMELQRRFNGRMANRAATAVGGGDPAMLARLQSLGMLADCARSILVTTIG
                     LLLATLLVPVVAAIEAEETLALVAVAGALMAALSGALRRAATGVPRLLLTAGLAVGGV
                     LAWLT"
     gene            complement(1014..1493)
                     /locus_tag="VGA78_12320"
     CDS             complement(1014..1493)
                     /locus_tag="VGA78_12320"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEX9894704.1"
                     /translation="MPIALARIDDRLIHGQVVIGWGVPLGVQLIVVVDDGVASNDWEQ
                     EIYRMAVPRSVAVEFAGSDTAASRLRQWQADPRPVFLLAGDVDTMAALVTAGAGVLPR
                     VNLGGIHAAVGRRERLRYVYLSDAEANTLRRLEAGGTVITAQDLPGATAIPLGELLS"
     gene            complement(1493..1870)
                     /locus_tag="VGA78_12325"
     CDS             complement(1493..1870)
                     /locus_tag="VGA78_12325"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894705.1"
                     /translation="MTPPLLNGVVVGHGSVAAALVAAAEQISGVRDALIAVTNLDCDR
                     ANLEARVQSAVGEGPAIVFVDLPTGSCFFAAMRGLGRLPYARVVTGVNLTMLVDFVFH
                     RTASLDLAAARARDVGTRAIAGT"
     gene            complement(1867..2829)
                     /gene="hprK"
                     /locus_tag="VGA78_12330"
     CDS             complement(1867..2829)
                     /gene="hprK"
                     /locus_tag="VGA78_12330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HEX9894706.1"
                     /translation="MTLRPRDLLQLRGNPLRLQSLTGEVGLDRPLPDSEVASPGLVLA
                     GYTARFLPDRMHVLGETEITYLNSLDPEPRQQRLEDFFGFPLPIVFVTKGLEVPPELL
                     QLAQARGVPLLRSELKTAEFYKNIKPVVEEANAPRTTMHGSLADVYGVGLMFMGRSGI
                     GKSECVLDLVERGHRLVADDVVQVVRRGNMLMGQGHELAAHHMEIRGVGLIDIPAIFG
                     IRSVRQQKRVEVVVQLEDWHSTKDVDRTGLAQQEAQILGVSLPKVSVPLNPGKNITVI
                     SEVVAMNHLLRMTGIDTAAAFNERLIRRMREQKGLREYLQEDFE"
     gene            complement(2826..3959)
                     /locus_tag="VGA78_12335"
     CDS             complement(2826..3959)
                     /locus_tag="VGA78_12335"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9894707.1"
                     /translation="MNILLVNWQDPENPQAGGAEIHLFELFGRLAARGHRIRMVCSGW
                     LGAARHARVQDVEITRIGDRNSFVLHGRGAIRRALEAEAPDVVVEDVNKLPLYTAGLT
                     DRPSYVIVPHLFGTTAFEEVPWWQAAIVWLAERPIPRAYRRSAFHAISESTRDDLVAR
                     GVRTSQVRVIRPGVDLTTYRPRPGLDRTPRPSFLYVGRLQRYKGVGIAIAALAIARRA
                     RQDLVLDIAGTGKDRPRLEALARSLGVAETVHFHGFVTHEDKLRLLRTTWAHLFPSVK
                     EGWGMTIIEAAACATPAIASNSPGLRDSVRDGQTGFLVPHGDPDLLARRMLELADDPA
                     LVNRLGKQARVFAEGLTWDAAAAATEAHLAQVIAEGPDTEGPA"
     gene            complement(3956..>4410)
                     /gene="nusB"
                     /locus_tag="VGA78_12340"
     CDS             complement(3956..>4410)
                     /gene="nusB"
                     /locus_tag="VGA78_12340"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX9894708.1"
                     /translation="TFRLFRPFRLFRPMIRPETRRRARAFQLLYAWETQGRPPLDDLV
                     RGFARMVRPGPVLLEESVALAHGVTERIDQLDQTIALAAEHWRFERIGLTERLVLRIA
                     AFELLQGATPPRVAIDQALWLAHRFAGASAVPFVNGILDRVAREMGRL"
BASE COUNT          730 a         1580 c         1494 g          606 t
ORIGIN      
        1 tagcggccga gaccagggcg ggaaccagtc ccgaccagaa gagccgatcg cccaacgcgc
       61 cgagcggtcc gctgagcgcg cgccgcaacc gttcgacctg ggccggcgtt gccccatcct
      121 tctcggcccg gacctcggcc ccgaccgcag cgggcgccag gtagggattg gcgttgaaga
      181 aaccggccgc ccgcgccagc gcttcccgaa accgttccgg ctcggcggcg aattgcgcgc
      241 gcaacaacgg ctcggtcgcg tggcccatcc cgatgccctg catccgctcg tagtgccagg
      301 tggcctgcag gcccagcaga cggaacagcg cgcgcgcccg gccggtcagg tgagccacgc
      361 caacacgccg ccgaccgcca gaccggcggt gagcaggaga cgggggacgc cggtggcggc
      421 ccgacgcagt gctcccgaga gcgccgccat cagggcaccg gccacggcca ccagggcgag
      481 ggtctcttcc gcctcgatgg cggcgaccac cgggacgagc agcgtcgcca gcagcagacc
      541 gatcgtggtg acgaggatgc tgcgggcaca gtcggccaac atgccgaggc tctgcaatcg
      601 cgccagcatc gcgggatcgc cgccgccgac ggctgtggcg gcacggttcg ccatccggcc
      661 gttgaaccgg cgttgcagct ccataccctt gcccccgatc accgccacga tgagtcccag
      721 cagcacggcg ccgccgatca tctcctgcgc cggcagcagt tgggccgcga agaccgcgct
      781 caccgcggcc ggtccgtaat cggggtagcg ggaagcgccc accggaagca catcgagcgc
      841 gaagcactcg agcagaatgc cgacccgcaa ccccagctcc acgtcgccca gcagcaggcc
      901 ggtcacggtg gcggcgacca ggggacgtcc cagcatagcc tgggggaagc tcaccagatc
      961 gaccccggcg atcgtgcccc acaccagcaa tcccagcagc gccgcgacct cgctcatgac
     1021 agcagctccc ccaaggggat cgcggtggct ccgggaagat cctgggccgt gatcaccgtg
     1081 ccgccggcct caagccgccg cagggtgttc gcctcggcat cggagagata gacgtagcgg
     1141 agtcgctccc gtcggcccac cgcggcgtgg atgccgccca gattcacccg cggaagcacc
     1201 ccggcgccgg ccgttaccag ggcggccatg gtatcgacat caccggcgag caggaacacc
     1261 gggcggggat cggcctgcca ttgccgcaac cgggacgcgg cggtatcact gccggcgaac
     1321 tccaccgcca ccgagcgggg gaccgccatg cggtagatct cctgctccca gtcgttggac
     1381 gccacgccgt cgtccaccac cacgatgagc tgcacgccga gcggcacgcc ccatccgatc
     1441 accacctggc cgtggatgag acggtcgtcg atgcgggcca gcgcgatggg catcaggtgc
     1501 cggcgatggc tcgggtgcca acgtcccggg ctcgcgcggc agccaggtcc agcgaggccg
     1561 tccgatgaaa cacgaagtcc accagcatgg tcaggttgac cccggtgacc acccgggcat
     1621 agggcagtcg tcccaatccc cgcatggccg cgaagaaaca ggaaccggta ggcagatcca
     1681 caaagacgat ggcgggccct tcgcccaccg cgctctggac ccgggcctcg agattggccc
     1741 ggtcgcaatc gaggttggtg acggcgatga gcgcgtcccg gacgccgctg atctgctccg
     1801 ccgcggccac cagggctgcc gccaccgatc catgccccac cacgacgccg ttgagcaggg
     1861 ggggcgtcat tcgaagtctt cctgcaggta ctcgcgcagg cccttctgct cccgcatccg
     1921 gcggatcagc cgttcgttga aggccgccgc ggtgtcgatg ccggtcatcc gcagcagatg
     1981 gttcatcgcc accacctccg agatgaccgt gatgttcttg cccgggttca gcgggacgct
     2041 cactttgggc agcgagacac ccagaatctg ggcttcctgc tgggccaggc cggtgcgatc
     2101 gacgtccttg gtgctgtgcc agtcttccag ctgcaccacc acctccaccc gcttctgctg
     2161 ccgcaccgac cggatcccga agatggccgg gatgtcgatc agccccaccc cgcggatctc
     2221 catgtgatga gccgccagct cgtgaccctg ccccatcagc atgttgcccc gccggaccac
     2281 ctggacgaca tcgtcggcca ccaggcggtg gccccgctcc accagatcca gcacacattc
     2341 gctcttgccg atgccggagc ggcccatgaa catgagcccc acgccgtaga cgtcggccag
     2401 ggagccgtgc atggtggtgc ggggggcatt ggcctcctcg accaccggct tgatgttctt
     2461 gtagaactcc gccgtcttga gctccgagcg cagcagcggc acgccccgcg cctgggccag
     2521 ctgtaacagc tcgggcggaa cctccaggcc tttggtaacg aagacgatcg ggaggggaaa
     2581 gccgaagaaa tcctccagcc gctgctgccg gggctccggg tcgagcgagt tgagataggt
     2641 gatctcggtc tcgcccagca cgtgcatccg gtcgggaagg aaccgcgcgg tgtacccggc
     2701 caggaccagg ccgggactcg ctacctccga gtcgggcagc ggccggtcga gccccacttc
     2761 tccggtcagg gattggagcc ggaggggatt gccccggagc tgcagcagat cgcggggacg
     2821 cagggtcacg ccgggccctc cgtgtcaggt ccttcggcga tgacctgggc caggtgcgcc
     2881 tcggtggcgg cggcggcggc gtcccaggtc agcccctcgg caaacacccg ggcctgcttg
     2941 cctaaccggt tcaccagggc gggatcgtcg gccagctcca gcatgcgccg ggccagcagg
     3001 tcggggtcgc cgtgggggac cagaaacccg gtttggccgt cccgcaccga gtcccgcagc
     3061 ccggggctgt tggaggcgat cgccggggtg gcgcaggccg cggcttcgat gatggtcatg
     3121 ccccagcctt ccttcaccga gggaaacagg tgggcccagg tggtccggag caggcgcagc
     3181 ttgtcctcgt gcgtgacgaa accgtgaaag tgcaccgtct ccgccactcc gagcgagcgc
     3241 gccagcgcct cgagtcgagg ccggtccttc ccggtgccgg cgatgtcgag caccagatcc
     3301 tgccgggccc gccgggcgat ggcgagcgcg gcgatggcga tgcccacacc cttgtatcgc
     3361 tggagccgac ccacgtataa gaaggatggc cgtggggtac ggtcaaggcc gggtcggggc
     3421 cggtaggtgg tcagatcgac accgggccga atcacccgca cctgggaggt ccgcaccccc
     3481 cgggccacca gatcatcgcg ggtgctttcg ctgatggcgt gaaaggccga ccgccggtag
     3541 gcccggggta tgggacgttc ggccagccac acgatggcgg cctgccacca gggaacttcc
     3601 tcgaacgccg tggtcccgaa gagatgcggg acgatcacgt aggacggccg gtcggtgagt
     3661 cccgcggtgt aaagcggcag cttgttgacg tcctcgacca ccacatcggg cgcctccgcc
     3721 tccagcgcgc gccggattgc gccgcggccg tggagcacaa agctgttgcg gtcgccgatc
     3781 cgggtgatct cgacgtcttg aacccgggcg tgccgggccg cccccagcca gccggaacag
     3841 accatccgga tccgatgacc ccgcgccgcc agccgcccga agagctcgaa gaggtgaatc
     3901 tccgccccgc cggcctgcgg gttttccgga tcttgccagt tgacgagcag gatgttcaca
     3961 gccggcccat ctcgcgcgcc acccgatcca ggatgccgtt cacgaagggc accgcactcg
     4021 ccccggcgaa gcggtgggcc agccagagcg cctggtcgat ggccacccgg ggaggagtgg
     4081 cgccctgcag cagctcgaag gccgcgatcc ggagcaccag acgttccgtc aggccgatcc
     4141 gttcgaagcg ccagtgctcc gccgccaggg cgatggtctg atccagctgg tcgatccgct
     4201 ccgtgacccc gtgcgccagg gccaccgatt cttccagcag gaccggcccg ggtcgcacca
     4261 tccgtgcgaa tccgcgcacc agatcgtcca ggggcggccg gccctgcgtc tcccaggcat
     4321 acaacagctg gaaggcccgg gcacggcggc gggtctcggg tctgatcatc ggtcggaaga
     4381 gtcggaaggg tcggaagagt cggaacgtcg
//
LOCUS       DASWKS010000433         7554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3536417, whole genome shotgun sequence.
ACCESSION   DASWKS010000433 DASWKS010000000
VERSION     DASWKS010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3536417"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2650)
                     /gene="tatC"
                     /locus_tag="VGA78_12345"
     CDS             complement(<1..2650)
                     /gene="tatC"
                     /locus_tag="VGA78_12345"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEX9894709.1"
                     /translation="MERSPGEMPFLDHLEELRLRILRSLGALVVTFGIGFWLVQRFQM
                     VQFLKAPIAPYLPDGRLTVLSPTDAVIITFKLAFIFALVLSSPVIIWQVWAFLAPALY
                     ERERKALVPALFAGLALFLAGAAFSWAFVVPKALEVLFAFQAGSFNNMITYDAYFGFA
                     LQIVLAMGLSSELPLLLIILTSLGLTTPAGLGRFRRVAVVLSCVGGAFLSPGTDIISM
                     LMMTIPLILLYEVGIAGSVVVHRRRLRREAAATAVLLVLLGAGGGRLEAQQPPSRRDS
                     AATAIDTSRIAKKMDTASARRLGLPSAPTRAFPSPDSVMQALMSLDGYMATRYLSDSA
                     SLSNRDRSVRLGGRAMTERDQRVLEAERISYKDEGCDLTAEGDPKMFDRSQVLVGDRL
                     RYDTCIERGVVDGVLTTFAEQGADWILRANPGVVDSSSSRMFAGNGEITSCDLPVPHY
                     SFSTKQVKWVSRSMLVARPAVLYVRDVPVAWIPFIFQDTKPGRRSGILVPQFGFNDIV
                     RPDPGYERQLTNAGYYWAASDYFDVAGRFDWYSRRYIRWTVSGQYNVLNRFFRGAVDY
                     ARQTENTGTVAQSIRWSHQQTFGITTTLAVSLDLATNSRVIADNAIDPLLNTQTLSSS
                     VNFTKRFTWGSLTAGGTRRQTLSDEQLTQDFPTLALSPKPIDLSGSITWSPTFTFRNQ
                     TATQAKQFLTFPLPGGGVDSVEQTPSSRTTTVNFGTPLRLGAFNLANSIDLTDQLDRK
                     LSGLSLKVPNDDTPDPTDSVSVDQTLAGSFESRLQWQFSFNLPLLFRGSWKLTPSVGV
                     ANKTSGPFAIRNETTAGDWVVQGKRLSFGLSAAPTLFGLFGGFGPVSAIRHTFAPLIS
                     WNYAPRADISEEFARAVATSPTQELRL"
     gene            complement(2663..3460)
                     /locus_tag="VGA78_12350"
     CDS             complement(2663..3460)
                     /locus_tag="VGA78_12350"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894710.1"
                     /translation="MPVRPRVVLLVLAATGAGGCATKGMVRRVETEIAVLRTQQARAD
                     SARAAELTRIIALQVRILDSLEAGRETLRQFRTEVSQELLNVQQQLVQVQELTGQSQR
                     RLAELRRDLDNRSEQLAATDTTHRPAPGDTAAAAPVPAGTPSPDQLYQGALAELRRGS
                     SSTARSAFHEFIRLYPTHAQMPDALYQLAETFADLPDSAAVYYQQVVDRYPQSSRAST
                     SLYKMGALAERRQDRAGARRLYQQVIQQYPRSQEASLARQKLASLQP"
     gene            complement(3451..4014)
                     /locus_tag="VGA78_12355"
     CDS             complement(3451..4014)
                     /locus_tag="VGA78_12355"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX9894711.1"
                     /translation="MRSPLVMLAVAALLFSGCKKSEPEVVPTPTTQPQPTPAPPPPPP
                     PPPAGPDPAACEAAIASGMNELSRMVTFETDQYDIRPADLPILDSKAEVLTAFPQVRL
                     RITGHADERYTDEYNLVLGTRRAEAARDYLIRKGVNGSRLETASLGETAPLDPGHTEE
                     AWNRNRRAEFTILAGRETLASRIQGCQ"
     gene            complement(4042..5319)
                     /locus_tag="VGA78_12360"
     CDS             complement(4042..5319)
                     /locus_tag="VGA78_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894712.1"
                     /translation="MIRRVLPLVLTLCGIGRLGAQDTTRVELRLFYNNPKLRPSLVVL
                     PTTGLDSVRAIVERDLDFSDRFELIQLPAAMAAPGAEGINWSPYRAMNVVIAIELTRV
                     ADRVRARLWEVAATAVRHETTVDLDLTGTGEGRMSVHRLSDEIVRWVAGSPGIATSRL
                     LFVSGNRVWRVDSDGYGAAPVSSAGKTAYSPAWSPDGRRYAFTEHVDGKWQIVLQTLA
                     SGTRTILPTTQTTQNITPAFSPDGRRLAFSRIADRSYAIHQANVVDLCCVERLTVGRF
                     AESLNPTYSPDGRRIAYVSTRAGSPQIYVMSADGTDQELLVPYQYGVDGPSFGPDWSP
                     DGTAIAFHREAGGTFQVLVFDLATERVRQVTSEGRNEDPSWAPDGRHIVFVSNRTGRG
                     QLHIIDLETSRVRVLRTPASAQLPAWSRRLGGP"
     gene            complement(5316..6011)
                     /locus_tag="VGA78_12365"
     CDS             complement(5316..6011)
                     /locus_tag="VGA78_12365"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HEX9894713.1"
                     /translation="MTSWRAVRKRPEGMRAGFTGSLLAHGLAVAGFILVTHQPAALGT
                     VYAVKLVAAPAAPPQTRRAAPEAIPRPQERTAPVKPPTRTAKPAPVPPKSVPQPKREA
                     AAQTASTERPNPGETPSTGTHVANVETPGQEFPYPEYLERIVNEIYRRWQRPLGTTAL
                     RTQVQFSIGRDGTVKEIRIVSRSRSYSFDLGAQGAVEAAANSRAFGPLPEGFKSDVLQ
                     IALWFVPLPRGNP"
     gene            complement(6008..6436)
                     /locus_tag="VGA78_12370"
     CDS             complement(6008..6436)
                     /locus_tag="VGA78_12370"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX9894714.1"
                     /translation="MAGGIRSLGGGRRGSLQVTADINVTSLVDIAFVLLIIFMITAPM
                     LQGGVDVQLPRAAARPLSVKEGLIITVDRNGRVFVDREGMSYEEFRASFGAIHARRRP
                     SGVFLRGDSRAPYGEVVKVLAVIRAAGIADVGLVAEEEER"
     gene            complement(6436..7119)
                     /locus_tag="VGA78_12375"
     CDS             complement(6436..7119)
                     /locus_tag="VGA78_12375"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX9894715.1"
                     /translation="MTWVDLVLSSGPEVIVVLVVTLAMSLASWFIIAMKWWQFRRIGR
                     QSLRFFQALETSTGLREGYRGVMKLQPSPFNRLFKEGLAFYTEINPGALTEAFERGKF
                     SLSDAQLEALKLVLGKEISAERDAVAHYVPWLATIGVVSPLLGLLGTVLGVMDAFIGI
                     ASRGSGNLAAVAPGVAAALITTVGGLAVAIPAVMAYNFFANRVGRFEGELDGFGNALI
                     GWMAREGWL"
BASE COUNT         1284 a         2455 c         2624 g         1191 t
ORIGIN      
        1 tcagccgcag ctcctgggtg ggactggtgg cgaccgccct ggcaaactcc tcggagatat
       61 cggcccgggg ggcatagttc cagctgatca ggggcgcgaa ggtgtggcgg atggccgaga
      121 ccggaccgaa accgccgaac aggccgaaca gggtcggcgc cgcggagagg ccgaaggaga
      181 gccgcttgcc ctgcaccacc cagtcgcccg cggtggtctc gttgcggatc gcgaaggggc
      241 ccgaggtctt gttggcgacg ccgaccgagg gggtcagctt ccagctgccg cgaaacagca
      301 gcggcaggtt gaagctgaac tgccactgca accggctctc gaacgagccg gccagggtct
      361 ggtccacgct gaccgagtcg gtcgggtctg gggtatcgtc gttaggcact ttgagcgaca
      421 ggccggacag ctttcggtcc agctggtcgg tcaggtcgat gctgttggcg aggttgaagg
      481 cccccagccg aagtggagtg ccgaagttca cggttgtggt ccggctggac ggggtctgct
      541 ccaccgagtc gactcccccg cccggcagcg ggaaggtcag gaactgcttg gcctgggtcg
      601 cggtctggtt tcggaaagtg aaggtcggcg accaggtgat ggacccgctc agatcgatcg
      661 gcttgggact cagcgccagg gtcgggaaat cctgggtcag ctgctcgtcg ctcagggtct
      721 ggcgccgggt cccacccgcg gtcagggacc cccaggtgaa ccgcttggtg aagttgaccg
      781 agctcgacag ggtctgggtg ttgagcagcg ggtcgatcgc gttgtcggcg atcacccgcg
      841 aattggtcgc caggtcgagg ctcaccgcca gcgtggtggt gatgccgaag gtctgctggt
      901 ggctccagcg gatcgattgg gccaccgtcc cggtgttctc cgtctggcgg gcataatcca
      961 ccgcgccccg aaagaagcga ttgagcacgt tgtactggcc cgacacggtc cagcggatgt
     1021 agcggcggga gtaccagtcg aaccggccgg cgacgtcgaa gtagtcgctg gcggcccagt
     1081 aatacccggc gttggtgagc tggcgttcgt agccgggatc gggacggacg atgtcgttaa
     1141 acccgaactg cggcaccagg atgccggaac ggcggcccgg tttggtgtcc tggaagatga
     1201 acggaatcca cgccaccggg acgtcccgca catagagcac cgcgggccgc gccaccagca
     1261 tggagcgcga gacccacttg acctgcttgg tggaaaagga gtagtgcggc accggcagat
     1321 cacagctggt gatctcgccg ttgccggcga acatgcggct cgagctcgag tcgaccacgc
     1381 cggggttggc ccgaagaatc cagtcggcgc cctgttccgc gaaggtggtc agcaccccat
     1441 ccaccacgcc ccgctcgatg caggtgtcgt agcgcagccg gtcgcccacc aggacctggg
     1501 atcggtcgaa catcttggga tcgccttcgg cggtcaggtc gcaaccctca tccttgtagc
     1561 tgatccgctc cgcctccagc acccgctggt cccgctcggt catcgccctc ccccctagcc
     1621 ggaccgaacg gtcccggttg gagaggctgg cggaatcgga caggtagcgg gtggccatgt
     1681 agccgtccag cgacatcagg gcctgcatca ccgaatcggg ggaggggaag gctcgggtcg
     1741 gggccgaggg gagtcccagc cgccgggcgc tcgcggtatc catcttcttt gcgatccgcg
     1801 aggtgtcgat ggcggtggcc gcgctgtccc gccgcgacgg cggctgctgg gcctcgagcc
     1861 ggcctccgcc cgctcccagc agcaccagca ggacggcggt cgccgccgcc tcgcgccgaa
     1921 gccggcgccg gtgcaccacg accgatcccg cgatccccac ctcatacagc aggatcagcg
     1981 gaatcgtcat catcaacatc gagatgatgt cggtgccggg ggagaggaag gcgccgccca
     2041 cgcatgacag caccaccgcc acccggcgga accggcccaa tcccgccggc gtggtgaggc
     2101 ccagcgaggt caggatgata agcagaagcg gcagctccga ggacagcccc atcgccagca
     2161 cgatctgcag tgcgaacccg aagtaggcgt cgtaggtgat catgttgttg aaggagccgg
     2221 cctggaaggc gaacagcacc tcgagcgcct tgggaaccac gaaggcccag gagaacgcgg
     2281 ctccggccag gaacagcgcc aatccggcga acaacgccgg gaccagcgcc ttgcgttccc
     2341 gctcgtacag cgcgggcgcc agaaaggccc agacctgcca gatgatcacc ggcgaggaca
     2401 gcaccagcgc gaagatgaag gccagcttga aggtgattat caccgcgtcg gtgggagaga
     2461 gcacggtgag ccggccgtca gggagatagg gcgcgatcgg cgccttgagg aactgcacca
     2521 tctggaagcg ctgcaccagc cagaagccga tgccgaacgt gacgaccagc gcgccgaggc
     2581 tccggagaat ccggagcctc agttcctcga gatgatcgag gaagggcatc tcgcccgggg
     2641 agcgctccat cgaaaggcta cgtcagggct ggagcgacgc cagcttctgc cgggcgaggc
     2701 tggcttcctg ggacctcggg tattgctgga tcacctgctg gtaaaggcgg cgcgcgccgg
     2761 cgcgatcctg ccgccgctcc gccagggctc ccatcttgta gagggacgtg ctggcccggc
     2821 tcgactgcgg gtatcggtcg accacctgct ggtagtagac cgcggcggag tcgggcaggt
     2881 cggcgaaggt ctcggccagc tggtagagcg cgtccggcat ctgggcatgg gtcggataca
     2941 accggatgaa ctcgtggaag gcactccgtg ccgtgctgct gctgccccgc cgcaactcag
     3001 cgagggctcc ctggtagagc tgatccggcg agggcgtgcc cgcgggcacc ggagcggccg
     3061 cggcggtatc gcccggcgcc gggcgatgag tcgtgtccgt cgcggccagc tgctcgctcc
     3121 ggttgtcgag atcccgcctg agttcggcca gccggcgctg gctctgaccg gtgagctcct
     3181 gcacctggac caattgctgc tgcacgttca acagctcctg cgagacctcg gtccggaact
     3241 gccgcagggt ctcgcgaccg gcttccagcg aatcgaggat tctgacctgc agcgcgatga
     3301 tgcgggtcag ctcggcggcg cgggctgaat cggcccgcgc ctgctgggtc cggagcaccg
     3361 cgatttcggt ttcgacccgg cgtaccatgc ccttggtggc gcagccgccc gcaccggtgg
     3421 cggcgagcac caggaggacg acccgaggcc tcactggcac ccttggatcc gggaggccag
     3481 cgtctcgcgg cccgccagga tggtgaactc ggcccgccgg ttccggttcc aggcttcctc
     3541 ggtgtggccc gggtcgagcg gcgcggtctc acccaggctg gcggtctcca gccggctgcc
     3601 attgacgccc ttgcggatca ggtagtcacg cgccgcttcc gcgcgccggg tgccgagcac
     3661 cagattgtac tcgtcggtat agcgctcgtc ggcgtggccg gtgatgcgga gccggacctg
     3721 ggggaacgcg gtgagcacct cggccttgga gtcgaggatg ggcaggtccg ccggccggat
     3781 atcgtattga tccgtctcga aggtcaccat ccggctcagc tcgttcatcc cgctggcgat
     3841 cgcggcctcg caggcggccg ggtcggggcc ggccggcggg ggcggcggtg gtggcggcgg
     3901 agccggcgtt ggctgcggct gggtcgtcgg ggtcggcacg acctcgggct ccgacttctt
     3961 gcatccggag aacaacaggg cggcgacggc cagcatgact aggggactgc gcatcgtcgt
     4021 tcctccaatc gtggtcatca ctcaaggtcc gccaagacgg cgagaccatg cgggcaactg
     4081 cgccgaagcg ggcgttcgaa gcacgcgcac cctgctggtt tccaggtcga taatgtggag
     4141 ttggcctcgc cccgtgcggt tggacacgaa gacgatgtga cgaccatcgg gcgcccagga
     4201 cgggtcttcg ttccggcctt cggaagtcac ctggcggacc cgttcggtgg cgagatcgaa
     4261 caccagtacc tggaacgttc cgccggcttc gcgatgaaaa gcgatggccg tgccgtccgg
     4321 cgaccagtcc ggcccgaagg acggaccgtc cacaccatac tggtacggaa ccagcagctc
     4381 ctgatcggtc ccgtcggcgg acatcacgta gatctgcggc gagccggcgc gcgtcgagac
     4441 atacgcgatg cgcctgccgt cgggagaata ggtagggttc aggctttccg caaaccgtcc
     4501 caccgtgagc cgctccacgc aacagaggtc caccacgttg gcctggtgga tggcgtagct
     4561 ccggtcggcg atccggctga acgccagacg gcggccgtcg ggagaaaacg ccggggtgat
     4621 gttctgggtg gtctgggtgg tgggcaggat ggtgcgggtg ccgctcgcca gcgtctgcag
     4681 cacgatctgc cacttgccat cgacgtgctc ggtgaaggcg tagcgccgcc cgtcgggact
     4741 ccaggccggt gaataggcgg tctttccggc cgaggagacc ggcgcggcgc catacccgtc
     4801 actgtccacc cgccacaccc ggttgccgga gacgaacagc aggcggctgg tcgcgatgcc
     4861 gggtgagccg gccacccagc gcacgatctc atcgctcagg cggtggacgc tcatccggcc
     4921 ttcgccggtg cccgtcagat ccaggtccac cgtggtttcg tgtcgcaccg cggtcgccgc
     4981 cacctcccag agccgggccc ggacccggtc ggccacccgg gtcagctcga tggcgatcac
     5041 cacgttcatg gcgcggtagg gggaccagtt gattccctcg gcaccaggcg ccgccatcgc
     5101 ggcggggagc tggatcagct cgaatcggtc actgaagtcc aggtcgcgct cgacgatggc
     5161 gcgcaccgaa tcgagtccgg tggtcggcag caccaccagt gagggacgca acttgggatt
     5221 gttgtagaac agccggagct ccacccgggt ggtgtcctgg gccccgagcc gaccgattcc
     5281 gcagagcgtc aacaccaagg ggagtactcg ccggatcacg gattgcctcg cggcaggggt
     5341 acgaaccaga gggcgatctg cagcacgtcg ctcttgaatc cttccggcag cggaccgaac
     5401 gcccgggagt tggccgcggc ctcgacggct ccctgggccc cgagatcgaa ggaatagctt
     5461 cgggagcggc tcacgatccg gatctccttc accgtcccgt cccggccgat ggagaattgc
     5521 acctgggtcc gcagcgccgt ggttcccagg ggccgctgcc agcgccggta gatctcgttg
     5581 acgatccgtt ccaggtactc gggataggga aactcctgtc ccggggtctc gacgttggcg
     5641 acgtgggtcc cggtcgaggg ggtttcaccg gggttggggc gttcggtgct ggcggtctgg
     5701 gcggccgctt cccgcttggg ttgcggcaca ctcttgggtg gcaccggcgc cggtttcgcg
     5761 gtgcgagtcg gcggcttgac cggcgcggtg cgttcctggg gccgcgggat cgcctcgggt
     5821 gccgcccggc gggtttgggg cggagccgca ggcgccgcga ccagcttgac ggcgtagacg
     5881 gtgcccagcg ccgcgggctg atgcgtgacc aggatgaacc cggccaccgc gagcccgtgg
     5941 gccagcagag agccggtgaa cccggccctc ataccttcgg gccgcttccg caccgcccgc
     6001 cacgacgtca tcgctcctct tcctccgcga ccaggcccac gtccgcgatc ccggctgccc
     6061 ggatgaccgc gagcaccttc accacctcac cgtagggcgc ccgactgtcg ccccgaagga
     6121 acacacccga cggacgccgc cgggcgtgga tggcgccgaa gctggcccgg aactcctcat
     6181 agctcatccc ttcccggtcc acgaagaccc gtccgttccg gtcgaccgtg atgatcagcc
     6241 cttccttgac cgacagagga cgcgcggcgg cgcgggggag ttgcacatcg accccgcctt
     6301 gcagcatcgg cgccgtgatc atgaagatga tgaggagcac aaacgcgatg tcgaccagcg
     6361 acgtgacgtt gatgtcggcg gtgacctgca gactgccccg ccggcctcct cctagcgaac
     6421 ggatcccgcc ggccatcaga gccatccttc ccgggccatc cacccgatga gcgcgttgcc
     6481 gaagccatcc agctcgccct caaaccgccc cacccggttg gcgaagaagt tgtaagccat
     6541 cacggcgggg atggccacgg ccaggccccc cacagtggta atgagcgcag cagccactcc
     6601 cggcgcgacc gccgcgagat tgcccgagcc gcgggacgcg atcccgatga aggcgtccat
     6661 gacgccgagc accgtaccca acagccccag cagcgggctc actactccga tagtggcgag
     6721 ccaggggacg taatgagcca ccgcgtctcg ttcagccgag atttccttcc ccaggaccag
     6781 cttgagggct tcgagctggg catccgacag actgaacttg ccccgttcga aggcctcggt
     6841 gagcgctccc ggattgatct cggtgtagaa ggcgaggccc tccttgaaca accggttgaa
     6901 gggggacggc tgcagcttca tcacgcctcg gtaaccttcc cgcagtccgg tactggtctc
     6961 gagcgcctga aagaagcgca ggctctgccg cccgatgcga cggaattgcc accacttcat
     7021 cgcgatgatg aaccaggacg cgagcgacat cgccagcgtg accaccagga ctacgatgac
     7081 ttccgggccg gagctcaaga ccagatcgac ccaggtcata ggcgcgccgg actcggacgt
     7141 ttgaagcatc agggctccgg ggaagctaag tctcagaaat taaagcggat cggcttccca
     7201 tctgaagtgg gttctggggg gagacggctt tggccgccat gctcgcacat cgggtggcca
     7261 tcgttcgccc ttggaccatt ggggatgttg gaaggggaga accgaaggca gagtgcagag
     7321 tgcagagtgc agagtgcaga gtgcagagtg cagagtgcag agtgcagagt gcagagcgca
     7381 gagtgcagag tgcagagtgc agaatgcaga atgcagaatg caggttgccg aggggtcgca
     7441 tgcgccggta accgtacccc gctcatggca cccttctgaa atctgcactc tgcattctgc
     7501 actctgcctt cggttcatca aacgaggctg agaacgaaaa gggccgaaga tcag
//
LOCUS       DASWKS010000434         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2818168, whole genome shotgun sequence.
ACCESSION   DASWKS010000434 DASWKS010000000
VERSION     DASWKS010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2818168"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..955
                     /locus_tag="VGA78_12380"
     CDS             242..955
                     /locus_tag="VGA78_12380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894716.1"
                     /translation="MSERRFSEEEVAAIFERATEAQQAPRGQLPPGEGLTLAELQEIG
                     REVGIPPALVAQAAGSLEQSRRPASRTLMGLTIGVGQTVELGRRLSDQEWERLVVDLR
                     ETFDARGSLRHDGAFRQWTNGNLQVLLEPTANGHRLRLQTVKGDARGLMSGGLALVAI
                     AAVVLLASVATGGAVDPSKVSILATLGAGMFGLGALRLPGWARLRRRQMEGVAERLNL
                     MAASEPSHQEPGEGPRAPA"
     gene            complement(1050..1388)
                     /locus_tag="VGA78_12385"
     CDS             complement(1050..1388)
                     /locus_tag="VGA78_12385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894717.1"
                     /translation="MASVLTWKCADAIEWEAGDRTEFQDLRQDIARLEQRVVEFRAEL
                     KQDIAHVEQKVAGVRSELIKMGVRVLARDRRNRDGASPVFRRAGLSTAVFLGPPSPLV
                     ALSDRQRHST"
BASE COUNT          255 a          497 c          533 g          248 t
ORIGIN      
        1 aatcccgtcc gatgcgccgt ttccatctcg ttgaacgcgt tgatgagtcc gccggcgact
       61 tcctcgccca ggttctcggg gctccgagca acagcttccc gctcagtggc atcggtgcac
      121 ttccgtgcga accgatccca ccctacagca tacgctcggc ggggggatag gcgaaagtac
      181 gcaggcgcgc gcggcggaag ggtttgccca cgatcgcttt ccccgcgatc ttggcatggc
      241 catgagcgaa cgtcgcttca gcgaggaaga agtggccgcc atctttgagc gtgccaccga
      301 ggctcagcag gccccgcgcg gccagctccc gccgggtgaa ggcctgaccc tcgccgagtt
      361 acaggagatc gggcgcgagg tggggattcc gccggcgctg gtggcccaag cagcgggctc
      421 gttggagcag agccgccgcc cggcgtcacg gaccctcatg ggcctcacaa tcggtgtggg
      481 acagacggtg gagctgggcc gccggctgtc ggaccaggag tgggaacgcc tggtggtgga
      541 tcttcgtgag acgttcgacg cccgcggctc gctccgccac gacggcgctt tccgccagtg
      601 gaccaacggc aaccttcagg tcctgctcga gcccaccgcg aacgggcacc ggctcaggct
      661 acagaccgtg aaaggggatg ctcgtggcct gatgagcgga ggtctggcgc tggtggcgat
      721 cgccgcggtc gtgctcctcg cctcggtggc gacgggcggg gcggttgacc cgtccaaggt
      781 ctctatcctg gccacgctgg gcgcgggcat gttcggcctg ggtgcgctcc ggcttccggg
      841 ctgggcccgg ctgcggcggc gtcaaatgga aggagtggcc gagcggctca acttgatggc
      901 ggcgtcggaa ccgagtcacc aggagccggg cgaggggccc cgggctccgg cgtaagccgg
      961 cggcgttgtg ccgcgggagt gagcactccg atggcgagga cgactcggcc ccggacgctc
     1021 atgctacagg acgcacgggt gatgatgcat caggtggagt ggcgctgccg atcagatagg
     1081 gcgactaggg gcgacggagg cccaagaaag acggcggtgc tcagacccgc tcggcgaaat
     1141 accggagaag cgccatcacg attccgacgg tcccgagcca gaacacgaac acccattttg
     1201 atcagctcgg accgcacgcc ggcgaccttc tgctccacgt gggcgatatc ctgcttcagc
     1261 tcggcccgga actcgaccac tcgctgctcg agccgtgcga tgtcttgccg caggtcctgg
     1321 aattcagtcc ggtcaccagc ttcccattca atggcatcgg cgcatttcca tgtgagaacc
     1381 gacgccacct tacagcatac gctgggcgcg ggtgtaggcg aaagtatgta ggatagatca
     1441 agcggccggg cgtgcgcagc ccctacccct tgggcctcac gaactcatgg cgaccggagc
     1501 gcttccaaag gctccactcg gctggcgcgc cgg
//
LOCUS       DASWKS010000435         2527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_597562, whole genome shotgun sequence.
ACCESSION   DASWKS010000435 DASWKS010000000
VERSION     DASWKS010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_597562"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2527
                     /locus_tag="VGA78_12390"
     CDS             <1..>2527
                     /locus_tag="VGA78_12390"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX9894718.1"
                     /translation="VTLLGEEGFPALLAGVPDEIFPADERLVLGDGRGLECDTSGIGP
                     FTGYRLPWEGGKTLFLTQSIYHTLGWGYNPSFSMLYAFDFSTSPSNLFNIWAARPGTV
                     KLIWEGQVNNDPNSPGNYIVLEDTGTNPKSYQLYLHLAQGSIPAGLKTVGVPVEQGQF
                     IGVADDTGFSTGHHLHFQVHTEVSWWGCSVDVRFADVGINGGRPRLPIEAQTNPEYGA
                     QGQTTYISGNTPPPPALSPLGGGVLTPATGQIVAGPDLLLEGYAFDFVDGVRTARFAY
                     NTGQGWTPAGSPTNFPGTPGTVAFSASIDVCGLGIPDGPVTFGILADNGSGSVLQGGL
                     AVPIILDADCAPPPPACSPAANQVAVFEFENYGGSCLVFPIGEHVQSFAARSVQVGDD
                     VSLTLYFSPLLRARSQSFFTDDPNLGDDRAALDLFASARVRLRTQVPGVPALAWPASG
                     EAVPLESSFSLVWHDGGGSREFQGRVNSPSGTLTSPWGSAPFWDPGPLMPGAYTWEVR
                     ARSEAGESVWSPSGSFTIAAANPIAATQVITAPVAEDFETPWSGWSGTGFWNRLQDGG
                     TAFNGLYAWWYGQPPGEFDGGDYRSGSPNAGSLTSPPIHIPGSGFYLRFYSRYETENA
                     GSHWDRRRVLISAGGGPFLEARQLSDDLMHQWGRSAYLDLSAFSGQTIRIRFVFETMD
                     AQFNDFQGWLLDAVTIDQNAPPACTAANEPDDTPAGATALAFGVLVAGEICPAGDVDY
                     FAFTGSAGDRIHLDVDAQSIGSQLDAYAFLLAGDGASVIAENDDEVPGVQIDPLLGYT
                     LPASSVYYIKIRSYDHPAQGGNAFHYTLRLEADGSDPVISALTS"
BASE COUNT          388 a          894 c          807 g          438 t
ORIGIN      
        1 gtcacgctgc tgggcgaaga aggcttcccg gccctgctcg ccggggtgcc tgatgagatt
       61 ttcccggccg acgaacgcct ggtcctgggg gacgggcgcg ggctggaatg cgacacctcc
      121 gggatcggac cgtttaccgg ctacagactc ccctgggagg gtgggaagac cctattcctg
      181 acgcagagca tctaccacac cctcggctgg ggttacaacc cgagcttctc catgctctac
      241 gcgttcgatt tctcgacctc cccgagcaac ctgttcaata tctgggcggc gcggcccggg
      301 acggtcaaat tgatctggga ggggcaggtt aacaacgacc ccaactcgcc cggcaactac
      361 atcgtcctgg aggacaccgg cacgaacccg aagtcgtacc agctttacct gcacctggcg
      421 cagggcagta tcccggcggg cctcaagacc gttggggtcc cggtcgagca aggccagttc
      481 atcggcgtgg cggacgatac cggtttcagc accggacacc acctgcattt ccaggtccat
      541 accgaggtaa gctggtgggg ctgctcggtc gacgtccgct tcgccgatgt cggcatcaac
      601 ggcgggcggc cgcggctccc gatcgaagcc cagaccaacc cggaatacgg cgcccagggc
      661 cagacgacct atatctccgg caacaccccg ccgccgcccg ctttgagccc gctcggcgga
      721 ggcgtgctca ctccggcgac cgggcagatc gtcgccggcc ctgacctgct cctggagggc
      781 tacgctttcg acttcgtcga cggggtccga acggcccgtt tcgcctacaa caccggccag
      841 ggctggaccc cggccgggag cccgaccaat ttccctggga ccccggggac tgtcgctttc
      901 agcgcctcga tcgacgtctg cgggctgggg atcccggacg gcccggtcac cttcgggatc
      961 ctggcggaca acggttccgg ctccgtgctg caaggcgggc tggccgtccc catcatcctg
     1021 gatgcggatt gcgccccgcc gccccctgcc tgcagccctg cagcaaacca ggtcgccgtc
     1081 ttcgagtttg aaaattacgg cgggtcctgc ctggtcttcc cgatcggcga gcacgtccag
     1141 tcgtttgcgg cgcgttcggt acaggtcggc gacgacgttt ccctgaccct gtatttctcc
     1201 cccctgctgc gggcccgcag ccagagcttt ttcaccgacg acccgaacct gggcgacgat
     1261 cgcgccgccc tggacctgtt cgcctccgcc cgggtccggc tgcgcaccca ggtccccggc
     1321 gtcccggcgc tggcctggcc cgcgtccggg gaggccgtgc cgcttgagag cagcttcagc
     1381 ctggtttggc acgacggcgg gggcagccgg gaattccagg gccgggttaa cagcccgtcc
     1441 gggaccctga cctcgccctg gggaagcgct cccttctggg acccgggtcc gctcatgccg
     1501 ggcgcctaca cctgggaggt gcgcgcccgc agcgaggccg gcgagtcggt ttggagcccg
     1561 tccggatcgt tcacgatcgc cgcggcaaat ccgatcgctg ctacacaggt catcaccgcc
     1621 cccgtggcgg aggattttga aaccccgtgg tccggatgga gcggaacggg cttctggaac
     1681 cgccttcagg acggcgggac ggccttcaac ggcctttacg cctggtggta tggccagccg
     1741 cccggcgagt tcgacggggg ggattaccgc agcggttcgc cgaacgccgg cagcctgacc
     1801 tccccgccga tccacatccc cggctcgggg ttctacctgc ggttttattc ccggtacgag
     1861 acggaaaacg ccggcagcca ctgggaccgc cggcgggtcc tgatctcggc cggtggaggt
     1921 ccattcctgg aggctcgcca gctctcggat gacctgatgc accagtgggg ccggtcggca
     1981 tatctcgacc tgagcgcctt cagcggccag accatccgca tccgcttcgt tttcgagacc
     2041 atggacgccc agttcaacga tttccagggc tggcttctgg atgcggtcac gatcgaccag
     2101 aacgccccgc ccgcctgcac ggccgccaac gagccggacg ataccccggc gggtgcgacc
     2161 gccctcgcgt tcggcgtcct ggtggccggg gagatctgcc cggccggcga cgtcgattat
     2221 ttcgccttca cggggagcgc cggcgatcgc atccacctgg acgtcgatgc ccagtcgatc
     2281 ggatcgcagc tcgatgcgta cgccttcctc ctcgccggag acggggcttc ggtcatcgcg
     2341 gaaaacgacg acgaagttcc tggggtccag atcgatccgc tgctcggata cacgctcccg
     2401 gcttccagtg tgtattacat caagatcagg tcctacgatc acccggcgca gggcgggaac
     2461 gccttccatt acaccctgcg gctcgaagcg gacggttcgg acccggtcat cagcgccctg
     2521 acctcct
//
LOCUS       DASWKS010000436         7581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_964803, whole genome shotgun sequence.
ACCESSION   DASWKS010000436 DASWKS010000000
VERSION     DASWKS010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7581
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964803"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VGA78_12395"
     CDS             <1..624
                     /locus_tag="VGA78_12395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894719.1"
                     /translation="HWLVQTGDGYAAHIAGAIGVSTDAQASWWGSEGVGTVPHALIAA
                     YGGDTVLASRKFADNMDPGIRLVTLVDFENDCVRTSLEVAEALGEVLYGVRLDTSEML
                     VDRSVVPQMGRFKPTGVCPQLVWNVRHGLDRAGYPGVKIVVSGGFTVDKIREFEQQGV
                     PVDAYGVGSSLFQGRFDFTADVVRHEGRACAKVGREYRANPRLERVI"
     gene            737..1372
                     /locus_tag="VGA78_12400"
     CDS             737..1372
                     /locus_tag="VGA78_12400"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HEX9894720.1"
                     /translation="MRSDIIFWDVDTQVDFMKSEGKLYVPDSESIIPTLKQLTDHAHA
                     RGIRIIASADDHVAGHRELSDTPDFRQTFPEHCMRGTPGQQKIPETALRHPLLIEPEP
                     QDPATVGARARSHVGDILFHKHWFDVFTNPNVLPVLGALAPARVVLYGVALDVCDRHA
                     IEGLLTHRPEIRLALVTDATRAIQAETATRLLRDWEQRGVQMVTAKQVLAA"
     gene            1369..2442
                     /locus_tag="VGA78_12405"
     CDS             1369..2442
                     /locus_tag="VGA78_12405"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9894721.1"
                     /translation="MRPFGRSFIPGPVDVHPDILEATLQPYYFTFNERMQALLAEMQP
                     GLRQLFGTSHIVFLSVSAASGLMEAAVRNGVRHRVLCVTGGYFGELFARIAEGCGKEV
                     IRAVVPLGQTLEADMLARFLEGPEVDAVTLVHSESSTGALAPLPDLARVVRSKPDTLL
                     LVDGVTSIGAMPMEMDAWGIDFLLTGSQKALALPPGMALGAVSPRLVARAEAQHDRGF
                     YLSATHLLNAAKRNFPLTTPALPIIHALQRQLRRIDDTGGLAARFARHTAMATMMAQW
                     AEARPDLRILADRSRRSPTVTALELRNGPRAAEVVKTLESRDWLIATGLSPLAKSVIR
                     IGHMGDLEPSHLADLLHELETVL"
     gene            2439..3023
                     /locus_tag="VGA78_12410"
     CDS             2439..3023
                     /locus_tag="VGA78_12410"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEX9894722.1"
                     /translation="MSPPRGITRRIVGWFARGLLITAPVALTLWIAWAVIRWVDRLLG
                     LDFPGAGLVVTLTAITLIGALASTFLARSIVVWIEDLMESVPFIRLLYTSTKDLLGAF
                     VGEKRRFTKAVRVALSEDGGVSVLGFVTAESLADLGVADQVGVYLPQSYNFAGQLIVV
                     PARRVTPVGADSAEVMAFIVSGGVSKAGRPSTDH"
     gene            3178..4011
                     /locus_tag="VGA78_12415"
     CDS             3178..4011
                     /locus_tag="VGA78_12415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894723.1"
                     /translation="MTRHTRFYLGTCAALLGACSEADPLDPSDSATLNADIAAAVADG
                     VGEDVQTMRELSQGLRFGVMFLSSSAQSPPGGCPYDAASGWHDCEPVELPNGLTIDRQ
                     YAFYNAAGAPMENFDAEQTASIRAQRVVDGDIERETEHGSLAASVHHERDFTVSGLQG
                     DEQKRTWNGTGSSDISRTRVSDEHGTRIYELSADVTVSNVEVPRHNNTDRDPWPLSGT
                     ITKQVEGSVTKDGETRSFERTVVITFNGTQFATATVTGADGTETFEIDLANRNAGRHR
                     P"
     gene            4089..5354
                     /locus_tag="VGA78_12420"
     CDS             4089..5354
                     /locus_tag="VGA78_12420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894724.1"
                     /translation="MLALLALSLLAYSAGNQDTAGRVAGWQADLQFLLTQARQVHAGP
                     GRPAHRPEFEQAVSGLFRRVPGLSDERIVVEIQRLMTLLGDGHSIVYLAPTPRIPLSR
                     LPIDMYWFSDGVYVVGGMGEGEQLIGSRVVQLGGRNAEDLLRELEPYISRDNAIAFKN
                     FGPFYLSVPAFLDALGAAGQRGAVALTVANAQGRTRTLLLAAGPMRGPLRKLAPPRAA
                     PSPPPMYLERVEVPYWLRRLPEHQTVYVQFNQVMDAGSDPLARFAQRLTDTLSTPGVS
                     SVIVDVRHNNGGDNTLLAPLINALASFERSRSGNRIFVLTSRTTFSAAQNFINRLERA
                     AHPVFAGEPSMSSPNFTGEDHEVRLPYSGLMLSISNRYWQDSEPADRRPWITPHLPVA
                     LTSRAYFKNEDPVLRAVLHAIRTGRFSPT"
     gene            5658..6113
                     /locus_tag="VGA78_12425"
     CDS             5658..6113
                     /locus_tag="VGA78_12425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894725.1"
                     /translation="MLQHLPYISRAHLLAGLSGSAKFWAVGLLVIYGALNLLFVLHAI
                     DCLRPRPLRQAVPPEGAPHQGEGLSMHRPLGILIWESVAAMDLATYHRAWDHAVMAQI
                     NGEAEAVFHTMARVIQAKYRALKRLYAGLAGLVVFGFVILCWFTVLTLR"
     gene            6163..>7581
                     /locus_tag="VGA78_12430"
     CDS             6163..>7581
                     /locus_tag="VGA78_12430"
                     /inference="COORDINATES: protein motif:HMM:NF000658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HEX9894726.1"
                     /translation="MPPITSLSFDNTYAHLPPELYEVVDPTPLPDPVLVALNPDAAQL
                     IELDPAVSTATDLASYLSGARRLPGAEPLAMLYAGHQFGVWVPQLGDGRAFLLGEVCN
                     RRGGKWDLHLKGGGPTRFARGGDGRSVLRSVIREYLGSEAMHGLGIPTTRALAIVASE
                     ALVRREQPERAATLLRLAPSHVRFGTFEALAALGRNDLVGILADYVISHHYPGFEQRY
                     GAWLREITVRTARLIASWQAAGFAHGVMNTDNMSLVGLTLDYGPFGFMEEFDPGFIPN
                     HTDHDGRYAFDQQPGVALWNLHRLAESLAGRLIQAEAEEALSAFHPAFEHHLGMRLRA
                     RLGLAESRPEDVRLVTELYHLLRTHRVDHTRFFRALGTFSTQSGAVTPELAAECSDRA
                     ELESWLALYRDRLAAERSRDQERQARMARVNPVYILRNWLAERAIRKAVDERDYSEIE
                     RLRVLLKLPFQHHPGFDEYSQSA"
BASE COUNT         1252 a         2528 c         2464 g         1337 t
ORIGIN      
        1 cactggctgg tccagaccgg tgatgggtac gcggcccaca tcgccggcgc gatcggagtg
       61 tcgaccgacg cccaggcgtc ctggtggggc agcgaaggag tcgggaccgt gccccacgcc
      121 ctgatcgccg cctacggtgg cgacaccgtc ctggcgagtc gcaagttcgc cgataacatg
      181 gaccccggca tccggctggt gactctggtg gatttcgaga acgactgcgt ccggacctcg
      241 ctcgaagtgg ccgaagcact gggcgaggtg ctctacggcg tgcggctcga taccagcgag
      301 atgttggtgg accggtcggt ggtaccgcag atgggccgat tcaagccgac cggggtctgc
      361 ccccagctgg tctggaatgt ccgtcacggg ctcgaccggg ccggctatcc aggcgtcaag
      421 atcgtcgtgt cgggcggctt caccgtggac aagatccgcg agttcgaaca gcagggtgtt
      481 ccggtcgatg cctatggcgt cggctcctcg ctgttccagg ggcgcttcga tttcacggcg
      541 gacgtagtac gccacgaggg ccgggcctgt gccaaggtgg ggcgggagta ccgggctaat
      601 ccgaggctgg agcgggtcat atgacattca gcgacttagc gacttgacga ttttgcgatt
      661 acggcaccag acatcttcgg aaagcaatcg ctaaagcgtc aaatcgctca atcgctaaat
      721 gcccgggagg ggcagcatgc gatccgatat catcttctgg gacgtcgata cccaggtcga
      781 cttcatgaag agcgagggca agctgtacgt ccccgacagc gagtcgatca ttcccacgtt
      841 gaagcagctg accgaccacg cccacgctcg cggcatccgg atcatcgcca gcgccgacga
      901 ccatgtcgcg gggcaccggg agctgagcga cacaccggat tttcggcaga cctttccgga
      961 gcattgcatg cggggaacgc cgggccagca gaagatcccg gagaccgccc tgcgccatcc
     1021 cttgctgatc gagcccgagc cgcaggaccc cgccacggtg ggggcgcggg cccggtccca
     1081 cgtcggcgat atccttttcc acaagcactg gttcgacgtc ttcaccaacc ccaatgtgct
     1141 gccggtcctc ggcgccctgg ctccggcccg ggtggtgctc tacggcgtgg cgctcgacgt
     1201 ctgcgaccgc cacgccatcg agggcctgct gacccatcgg cccgagatcc gcctggccct
     1261 ggtcaccgat gcgacccgcg ccattcaggc cgagaccgcc acccggctcc tgcgggactg
     1321 ggagcaacgc ggggtgcaga tggtgacggc gaaacaggtg ctcgccgcgt gaggccgttc
     1381 ggacgaagct tcatccccgg cccggtggac gttcacccgg atattctgga ggcgacgctc
     1441 cagccgtact acttcacttt caacgagcgg atgcaggcgc tgctggcgga aatgcagccc
     1501 gggctgaggc agctgttcgg caccagtcac atcgtctttc tctcggtgtc agccgcaagc
     1561 ggactcatgg aagccgccgt ccggaatggg gtccggcatc gcgtcctgtg tgtcaccgga
     1621 ggctatttcg gcgagctgtt cgcccggatc gcggaaggct gcggcaagga ggtgatccgg
     1681 gcggtggttc cgctgggcca gacgctcgag gccgacatgc tggcgcgctt cctggagggg
     1741 ccggaggtcg acgcggtgac gctggtgcat tcggaatcgt cgaccggcgc gctggcaccg
     1801 ctgccggacc tggcccgggt ggtacgctcc aagcccgaca cactgctcct ggtcgatggc
     1861 gtcacctcga tcggggcgat gccgatggaa atggatgcct gggggatcga cttcctgctc
     1921 accggctcgc agaaggcgct ggcccttccc cccggcatgg ccctgggcgc cgtcagtcca
     1981 cgcctggtgg cccgggccga ggcgcaacac gatcgcgggt tctatctgag cgctacccat
     2041 ctgctcaacg cggccaaacg gaacttcccg ctcaccaccc ccgccctgcc gatcatccat
     2101 gctttgcaac ggcaactgcg acgcatcgac gacaccggcg ggctcgccgc ccgcttcgcc
     2161 cgtcacaccg ccatggcgac catgatggcc cagtgggccg aagcccgacc ggacctgcgg
     2221 attctggcgg accgctcccg tcgctctccc accgtcaccg cgctggagct ccggaacggc
     2281 ccgcgggccg ccgaggtggt caagaccctc gaatctcgtg actggctcat tgcgactggc
     2341 ctgtcgcctc tggcgaagtc ggtcatccgg atcgggcaca tgggagactt ggaaccctcg
     2401 cacctggcgg acctgcttca cgaattggag acggtcctgt gagtccccca cggggaatca
     2461 cccgccggat cgtcggctgg ttcgcgcgcg ggctgctcat caccgcgccg gtggcactca
     2521 ccctctggat cgcctgggcc gtcatccgct gggtcgaccg gctgctcggc ctcgatttcc
     2581 cgggggcggg gttggtggtg accctgaccg cgatcactct gatcggcgcc ctggcttcga
     2641 ccttcctggc gcgaagcatc gtcgtctgga tcgaggacct gatggagagc gttcccttca
     2701 tccggttgct ctatacctcg accaaggacc tgctaggcgc cttcgtcggt gaaaagcggc
     2761 gtttcaccaa ggcggtgcgg gtggcgttga gcgaagacgg gggcgtctcg gtgctcggct
     2821 tcgtcaccgc ggaatccctg gccgatctcg gcgtcgcgga ccaggtggga gtgtatcttc
     2881 cgcagtcgta taatttcgcc ggacaactca tcgtggtgcc ggcacgccgg gtgactcccg
     2941 tcggggccga cagcgcggaa gtgatggctt ttatcgtatc gggtggcgtc tcgaaagctg
     3001 gaagacccag tactgaccac tgaagtactg agtactgggt actgagtagg gtggaggatg
     3061 ataaaaccca gtgtcctaag cacttactca gtactcagta ctcagtcctc agtacttgag
     3121 ttaacggttc agcccgccca ccgtcctacc cctcgtcccg acaatgcgag ccactgaatg
     3181 acccgccaca cgcggtttta cctcggcacc tgcgcggctc tcctgggcgc ctgctcggaa
     3241 gccgacccgc tcgacccgtc cgacagcgcc accctcaacg ccgatatcgc ggccgcggtc
     3301 gcggacggcg tgggcgaaga tgtccagacc atgcgggagc tgagtcaggg ccttcgcttc
     3361 ggcgtaatgt tcctctccag ctcggcccaa tcaccccccg gcggttgtcc ttacgacgcc
     3421 gcgagcggat ggcatgactg cgagccggtc gagctgccca acggattgac catcgatcgc
     3481 cagtacgcct tctacaacgc cgccggcgcc ccgatggaga actttgacgc cgaacagacc
     3541 gcgtccatca gggcccagcg ggtggtggat ggcgacatcg agcgtgagac cgagcacggt
     3601 tcgctggctg ccagcgtcca ccacgagcgc gactttacgg tttcgggcct gcagggcgac
     3661 gagcagaaac gcacctggaa cggcaccggc tcaagcgaca tctcgcgcac ccgggtatcg
     3721 gacgaacatg ggacccggat ctatgagctc tcggccgacg tgaccgtgtc gaatgtcgag
     3781 gtaccccgtc acaacaacac cgaccgcgac ccctggccgc tgtccggtac catcaccaag
     3841 caggtggaag gcagtgtgac caaggacggt gagacccgga gcttcgagcg gaccgtggtc
     3901 atcacgttca atggaaccca gtttgccacc gcaaccgtca cgggagccga cgggaccgag
     3961 accttcgaga tcgatctcgc caaccggaac gcgggtcggc accggcccta gtccgaaacc
     4021 ggccgcaggc ccggccggcc ccgctcctct cggaaaccgg gaggagtggg gcttcgtagt
     4081 ccttccccat gcttgccctc ctcgcccttt cgctcctggc ctactcggcc gggaatcagg
     4141 acaccgccgg ccgggttgcc ggctggcagg ccgaccttca gttcctgctt acccaggccc
     4201 gccaggtgca cgccggtccc gggaggcccg cccaccgccc ggagttcgag caggcggttt
     4261 ccggcctctt ccgccgagtt cccggcctga gcgacgaacg catcgtggtg gagatccagc
     4321 ggttgatgac cctcctggga gacggacatt cgatcgtcta cctggcgccg acgccccgaa
     4381 tcccattgtc gcggctcccg atcgacatgt actggttcag cgatggtgtt tacgtagtcg
     4441 ggggaatggg cgagggcgag caactgattg gaagccgggt ggtgcagctg ggtggccgca
     4501 acgccgagga cctgctcagg gaactcgaac cctatatcag ccgtgacaat gcaatcgcct
     4561 tcaagaactt cgggccgttc tatctctctg tgcctgcgtt tctcgatgcc ctgggggcag
     4621 ccggccagag gggggcggtc gcgctcaccg tggcaaatgc ccagggacga acccggaccc
     4681 tgctcctcgc ggccggaccg atgcggggtc cccttcggaa actggctccg ccccgggccg
     4741 cgccgtctcc tccaccgatg tacctggaac gggtcgaggt cccgtactgg ttgcggcgcc
     4801 tccccgagca ccagacggtg tatgtccagt tcaaccaggt catggatgcg ggatcggacc
     4861 cgctggcgcg gttcgcccag cggttgacgg acacgctctc gaccccaggg gtctcaagcg
     4921 tcatcgtgga cgttcggcat aacaacggcg gcgacaatac gctgctggcg ccgttgatca
     4981 atgcgctggc ctcgttcgag cgaagccggt cgggcaaccg gatcttcgtg ctcacgtcgc
     5041 gcaccacgtt ctccgccgcg cagaacttca tcaaccgact ggaacgcgcc gcccatccgg
     5101 tattcgctgg tgagcccagt atgtcgagtc ccaacttcac cggagaagat catgaggtcc
     5161 ggttgcccta cagcgggctg atgctgagca tctcgaaccg gtattggcag gattcggagc
     5221 cggccgatcg tcgaccctgg atcacaccgc atctgccggt cgctctcacc tcacgcgcct
     5281 acttcaagaa cgaagatccg gtgctccggg cggtgcttca cgccatcagg accggccggt
     5341 tctccccgac gtaacggtcc tttcacccac ggttcaccgc cgcttacgga cagcccgacg
     5401 agattgaagt cggtcccagc gccagaggtg ccgtatgaag ggcacgcaaa acgggcacct
     5461 gcttgaagag gccatcggcc ggaagcacgc cctgaagcac gaggaacggg aagccaggat
     5521 acgggagctg gctgaccggc cgccggagcc gtgggagcgt tttcgcatcc tgatcgaggc
     5581 ggtgagcgaa ggccgtcagg tgatcgagct ggtcgaccac cgggctcggt acgcgctggt
     5641 ggcgctgggc gtcttgaatg ctgcagcatt tgccttacat atcgcgggcc cacctcctcg
     5701 ccggcctgag cggctccgcc aagttctggg ctgtaggcct gctggtgatc tacggcgcgc
     5761 tcaacctgct cttcgtgctc cacgccatcg actgcttgcg gccgcggccg ttgcgccagg
     5821 cggttccgcc cgagggcgcc ccgcaccagg gggaaggcct gtcgatgcat cggccgctcg
     5881 ggatcctgat ctgggaatcg gttgccgcga tggatctcgc gacctatcac cgggcgtggg
     5941 atcacgcggt gatggcccag atcaacgggg aagccgaggc agtgtttcat acgatggctc
     6001 gggtgatcca ggcgaagtat cgcgccctga agcgactcta cgccgggttg gccggtctgg
     6061 tggtgttcgg attcgtcatt ctctgctggt tcactgtatt gacgctgcgg tgataactct
     6121 ccctcagtaa ttcccgagca atctggtata ttggtggtcg gcatgccgcc gatcacctca
     6181 ctctccttcg ataacaccta cgctcatctg ccaccggagc tgtacgaggt cgtcgatccg
     6241 acgcctctac ccgatccggt cctggttgct ctgaatcccg atgccgcgca gctgatcgaa
     6301 ctcgaccccg ccgtttcgac cgccacggac cttgcatcct atctctccgg agcgcggcgc
     6361 ctgcccggcg ctgaaccgct cgccatgctg tacgcgggcc accagttcgg ggtatgggtg
     6421 ccgcagctgg gcgatggacg ggcgtttctg ctgggtgaag tctgcaaccg gcggggcggg
     6481 aagtgggatc tgcacctcaa gggtggcggg cctacccgct ttgcgcgggg cggtgacggc
     6541 cgttcggtgc tccggagcgt gatccgcgaa tacctcggct ccgaggcgat gcacgggctg
     6601 ggtattccca ccacccgcgc gctcgccatc gtggccagcg aggcgctggt ccggcgcgag
     6661 cagccggagc gggcggcgac cctcctgcga ctggcaccga gccacgtgcg cttcggcacc
     6721 ttcgaagcgc tggcggctct agggcggaac gacctggtcg gtatcctggc cgattacgtc
     6781 atcagccatc attaccccgg cttcgagcag cgttacggcg cctggctccg cgagatcacg
     6841 gtgcgcacgg cgcggttgat cgcctcgtgg caggcggccg gctttgctca cggcgtgatg
     6901 aacaccgaca acatgtctct ggtcggtctc acgctcgact acggaccctt cgggttcatg
     6961 gaggagttcg atccggggtt catccccaac cataccgacc acgacggccg ctacgccttc
     7021 gaccagcagc ccggcgtggc gctgtggaat ctccaccgac tggccgagtc gctggcgggc
     7081 cggctgattc aggcggaagc ggaagaagcc ctgagcgcct tccatcccgc attcgagcac
     7141 cacctgggga tgcgactccg ggctcgcctc gggctggccg agtcacggcc ggaagacgtg
     7201 cggctggtca ccgagctcta ccacctgctc cgaacccatc gggtcgatca cacccgcttc
     7261 ttccgggccc tcggcacgtt ctcgacccag tcgggtgcgg tgacgccgga gctcgccgcc
     7321 gagtgcagcg accgggccga gctggagtcg tggctggcgc tctaccgcga ccgtctggcg
     7381 gccgagcgaa gcagggacca ggaacgccag gctcgcatgg cgcgggtgaa tccggtgtac
     7441 atcctgcgta actggctggc ggaacgggcc atccggaagg cggtggacga gcgggactac
     7501 tcggagatcg agcgccttcg agtgttgctc aagctgccct tccagcacca tccgggattc
     7561 gacgagtaca gccaaagtgc g
//
LOCUS       DASWKS010000437         1704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2819209, whole genome shotgun sequence.
ACCESSION   DASWKS010000437 DASWKS010000000
VERSION     DASWKS010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2819209"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VGA78_12435"
     CDS             <1..517
                     /locus_tag="VGA78_12435"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEX9894727.1"
                     /translation="TPEGLAKLPPYFKKEGLVTAGNASGIVDGGAAVVLCTEKLAQAR
                     GLRPLGRLVSWGFAGVDPRIMGIGPVPASRKALARANLSLDQMDLVEVNEAFAAQYLA
                     VERELGLDRQRTNTEGGAVAIGHPLAATGTRIALHLLHALRRTGGRYGLGAACIGGGQ
                     GAAVVVEALPA"
     gene            528..1409
                     /locus_tag="VGA78_12440"
     CDS             528..1409
                     /locus_tag="VGA78_12440"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEX9894728.1"
                     /translation="MDVLLPVLALLVSYSFVSLRVLRQYERGVTFFLGRYWGTKGPGL
                     IFLPLGFASMKRVSLRIRALDIPPQDVITRDNVSVKVNAVLYMKVADPGRAVIEIEDY
                     TYATSQLAQTTLRSVLGEVELDELLADREKINAILKRIIDERTDLWGISVSAVEVKDV
                     DLPESMKRAMARQAEAERERRAKVIGAQGELQASKTLAEAARTLATEPMSLQLRYLQT
                     VTEIAAENNSTTIFPIPIDMIRPFLPALTQPQGAGNREQGAGSSLQGVLEAPPAPLSP
                     LPAPPEALLPKIKIDEK"
     gene            1406..>1704
                     /locus_tag="VGA78_12445"
     CDS             1406..>1704
                     /locus_tag="VGA78_12445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894729.1"
                     /translation="MTEPPVPARIDRAALERILQRAAELQAQEHDVGEGLSSDEVIAL
                     GKEVGIPGPLLRQAMLEERSRIAAVTPEGLADELFGSDEVVAARVVRGTPEAAEAA"
BASE COUNT          289 a          564 c          585 g          266 t
ORIGIN      
        1 cacccccgag ggcctggcga agctgccgcc ctacttcaag aaggaaggat tggtgacggc
       61 aggaaacgca tcgggcatcg tggacggcgg ggcggccgtc gtgctttgca ccgagaagct
      121 ggcccaggcc agggggctcc gtccgctggg ccgcctggtt tcctggggct tcgcgggagt
      181 cgatccccgg atcatgggca tcgggccggt gcccgcgtcg cgcaaggcgc tggcccgggc
      241 caacctgagc ctggaccaga tggatctggt cgaggtcaac gaagcattcg cggcccagta
      301 cctggcggtc gagcgagagc tgggactcga ccgtcaacgt accaacaccg aaggcggagc
      361 ggtcgccatc ggtcatcccc tggccgcgac cggtacccgt atcgccctgc atctgctgca
      421 cgctctccgg cgcaccggtg gccgctacgg gctgggagcc gcgtgcatcg gcggcggaca
      481 aggcgccgcg gttgtggtcg aagcccttcc cgcctgaggt tgcgcgcatg gatgtcctcc
      541 tcccggttct agcgttgctg gtcagttact cgttcgtgag cctccgggtg ctgcgacagt
      601 acgagcgcgg cgtgaccttt tttctgggcc ggtactgggg caccaaaggt ccgggcttga
      661 tcttcctgcc gctcggcttc gcctccatga aacgggtttc gctccggatc agagcgctgg
      721 acatcccacc ccaggacgta atcacccggg ataacgtctc ggtgaaagtg aatgcggtcc
      781 tctatatgaa ggtcgccgat ccgggccggg ccgtcatcga aatcgaggac tacacctatg
      841 ccaccagcca gctggcccag accacgctcc ggtcggtgct gggcgaagtg gagctggacg
      901 agctgctggc cgaccgggaa aagatcaacg ccatcctcaa gcgcatcatc gacgagcgga
      961 ccgatctctg gggcatctcg gtctcggcgg tcgaggtgaa ggacgtcgac cttcccgaat
     1021 cgatgaagcg ggcgatggcc cggcaggccg aagccgagcg ggaacgccgt gccaaggtga
     1081 tcggggccca gggcgagctg caggcctcca agaccctggc cgaggcggcc cggaccctgg
     1141 cgacggagcc gatgtcgctc cagctccgct atctgcagac ggtcaccgag atcgcggcgg
     1201 aaaacaattc caccaccatc ttcccgatcc cgatcgacat gattcgaccg ttcctccccg
     1261 ccctgaccca gccccaggga gcaggcaaca gggagcaggg agcaggaagc agtctgcagg
     1321 gagtcctcga ggcgccgccg gctcccttgt ccccgctccc tgctcccccg gaagcattgc
     1381 ttcccaagat caagatcgac gaaaagtgac cgagcctccc gttcctgccc gcatcgaccg
     1441 tgcggcgctg gagcggattc tccagcgcgc agccgagctg caggcgcagg agcacgacgt
     1501 gggcgaggga ctcagctcgg atgaggtgat cgcgctgggg aaggaggtgg gcatccccgg
     1561 ccccctcctg cgtcaggcga tgctggagga gcgcagtcgc atcgcggccg tgacgcccga
     1621 agggctggcc gatgagctgt tcggatccga cgaagtggtg gcggcccggg tggtgcgcgg
     1681 cacccccgag gcggccgagg ccgc
//
LOCUS       DASWKS010000438         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1328931, whole genome shotgun sequence.
ACCESSION   DASWKS010000438 DASWKS010000000
VERSION     DASWKS010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328931"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..1278)
                     /locus_tag="VGA78_12450"
     CDS             complement(157..1278)
                     /locus_tag="VGA78_12450"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX9894730.1"
                     /translation="MRWFRLALFTLAIACGSNRVASQDYQSRNGRFRVVTVAQGLDHP
                     WAVAFLPDGRMLVTERPGRMRFVSPTGTLSPPLTGVPPVVAAGQGGLLDVVLDPAHAQ
                     NRTIWFTYSEPGEGGAGTALAKARLADSGLENVAVVFRQSPKFGGGAHFGSRIVFSRD
                     GHIFVTLGERGRKEMAQDLARHNGRVIRLRLDGSVPPDNPFVGRQDARPEIWSYGHRN
                     PQGAALHPETGVLWTVEHGAMGGDEINIPRAGRNYGWPVISYGRDYSGAKIGEGTSKA
                     GMEQPIHYWDPSIAPSGMAFYTGDRYSGWKGSLFIGSLKFGTLSRLELEGERVRNEER
                     LLEGRDERIRDVRQGPDGYLYLLTDEGNGKLLRLEPVAR"
     gene            1379..2170
                     /locus_tag="VGA78_12455"
     CDS             1379..2170
                     /locus_tag="VGA78_12455"
                     /inference="COORDINATES: protein motif:HMM:NF025446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HEX9894731.1"
                     /translation="MKQDPHHRTNGQSQLPAQALAIVLLRDRAPPDPERVFAWLRDAW
                     PDTPSILNPETQGAATSAIIQGGAIGLLHVPMPLPATDLEGPIATAWHWTGAAAAIAT
                     HQSHIICYASSTGLSPIELRLLHTRFVAAVAATAPASAVYVGSAMLVREAAAWVLEAQ
                     EATRNALPILLWVGFNPVTHSGRMSAYTTGMRDFDLLEFEVQGSQRAPLDLLNRLADI
                     AYYAVTTGTQIGDGHTVGGADNERIMVHHGQSAFLPELTVAKLDL"
BASE COUNT          425 a          838 c          775 g          394 t
ORIGIN      
        1 aggaagagag tgcgcatggg gccgtatgag agggttgccg gaagctaccc gacaactccc
       61 cgacgtgtaa gacatggtcg cggggtaaac agtgatcggt gaaccgttca ctgttcactg
      121 ttcactgttc actgttcact gttcaccgta caccagttac cgcgcgaccg gctccagcct
      181 gagcagtttc ccgttgccct catcggtcag caggtacaga tagccgtcgg gtccctgcct
      241 cacgtcgcgg attcgctcgt cccggccttc cagcaatcgc tcttcattcc gcacccgttc
      301 gccctccagc tccaggcggg acagggtgcc gaacttgagc gacccgatga agaggctgcc
      361 cttccagccg gaatagcggt cgccggtgta gaacgccatg ccgctgggcg cgatcgatgg
      421 atcccagtag tgtatcggct gttccatccc cgccttgctg gtcccttcgc cgatcttggc
      481 gccggaatag tcccgcccgt agctgatcac cggccagccg tagttgcgac cggcccgtgg
      541 gatgttgatc tcgtctccac ccatggcgcc gtgctccacc gtccagagca cgccggtctc
      601 gggatggagg gccgcgccct gaggattacg atggccgtag gaccagatct cgggccgcgc
      661 atcctgccgg cccacgaacg gattgtccgg agggaccgag ccgtcgagcc ggagccggat
      721 gacccggccg ttgtggcggg cgagatcctg ggccatttcc ttgcggcctc gctcgcccaa
      781 cgtgacgaag atgtgtccgt cgcggctgaa gacgatccgg gatccgaaat gggcgccgcc
      841 cccgaacttg ggggactggc ggaacaccac tgcgacattc tccaggccgc tatcggcgag
      901 acgcgccttg gccagcgcgg ttccggcgcc gccctccccg ggctccgaat acgtgaacca
      961 gatcgtccgg ttctgggcgt gggccgggtc gagcaccacg tcgagcaggc ctccctgacc
     1021 cgccgcgacc accgggggca ctccggtaag cggcggcgac agcgttccag tcggtgaaac
     1081 aaaccgcatg cgcccgggcc gttcggtgac gagcatccgg ccgtcgggca agaaggcgac
     1141 cgcccaggga tggtccaggc cctgggcaac ggttaccacc cggaagcggc cgttgcgaga
     1201 ctggtagtcc tgggaggcaa cgcgattgga cccgcaggcg atcgccaggg tgaagagtgc
     1261 caaacgaaac cagcgcaccg ggttctccga gtggacggga gtcgaagaat agatgagccc
     1321 gaccggggtc gcaccagccc agtagccacc gccccgatcg gggagtaacg tctcccgcgt
     1381 gaagcaggat ccccatcatc ggacgaacgg ccaatcccag cttcctgctc aggccttggc
     1441 catcgtgttg ctccgcgacc gggcgccccc ggacccggag cgagtcttcg cctggctgcg
     1501 ggacgcctgg cccgatacgc cgtccatcct caatccggag acccagggcg ccgcgaccag
     1561 cgccatcatc cagggcggcg cgatcggtct cctccacgtc ccgatgccac tcccggccac
     1621 cgatctggag gggcccatcg ccacggcgtg gcattggacc ggcgccgcgg cggccatcgc
     1681 gacccatcag tcgcacatca tctgctacgc cagcagtacc ggcctttcac ccatcgagct
     1741 tcggctgctg cacacccggt tcgtggccgc cgtcgccgcc accgcgcccg cctccgccgt
     1801 ctacgtcggc tcggccatgc tggtgcgcga agccgcggca tgggtgctcg aagcccagga
     1861 ggccacccgg aacgcgctcc cgattctcct ctgggtcggc ttcaacccgg tgacccattc
     1921 gggcaggatg tcggcctaca ccaccggcat gcgcgacttc gatctgctcg aattcgaggt
     1981 gcaaggaagc caacgcgctc cgctcgatct gctcaaccgg ctggccgata tcgcctacta
     2041 cgcggtcacc accggcaccc agatcggcga cggccacacc gtgggcggtg ccgacaacga
     2101 gcggatcatg gtgcaccacg gtcaatccgc gtttctgccg gagctgacgg tcgcgaaact
     2161 ggacctctga accacaaaaa cagggagcag ggagcaggaa gcagggagca gggagcaggg
     2221 agcagggagc aggaagcagg aagcagggag cagggagcag gaagcaggga gaggaaccgc
     2281 agccgggaat cagaagggga ccatccgtct tcttcctgct ccctgctccc tgctccctgc
     2341 tccctgcttc ctgcttcctg ctccctgttt ttgtggttca gaggtccagt ttcgcgaccg
     2401 tcagctccgg cagaaacgcg gattgaccgt gg
//
LOCUS       DASWKS010000439         4844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2465920, whole genome shotgun sequence.
ACCESSION   DASWKS010000439 DASWKS010000000
VERSION     DASWKS010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4844
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465920"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VGA78_12460"
     CDS             complement(<1..669)
                     /locus_tag="VGA78_12460"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding family 9 domain-containing
                     protein"
                     /protein_id="HEX9894732.1"
                     /translation="MIILSLMLLASVQDTSSAHSGRANRIKVPIPRLEAEATVDGRLD
                     EPVWATAARLTDFSQFQPVDGRAAEEPTEVRVWYAPDAIWFGIRARELHGNVVRATRA
                     NRDNIASEDHVQILLDTNNDRRIAFLFGVNALGVQQDGTRSDQFGGGAGGASATGGGT
                     GSMNPLDGTVDLNPDYVFESRGRLVEGGYEVELRIPFKSLRYQEAAVQDWGIHILRRI
                     QHSGF"
     gene            complement(725..1990)
                     /locus_tag="VGA78_12465"
     CDS             complement(725..1990)
                     /locus_tag="VGA78_12465"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HEX9894733.1"
                     /translation="MDPTDVRNFAIALGIGALIGMEREKRKSAEPYQALGGIRTFILL
                     AMAGAISAWISVELQATWIFALALVAAAALVLTGYGLTLRAGTATAGLTTEVAALVTV
                     LLGGLVMFGWPALAVGLGITTAAVLAFKVQLHGAVARIGEDDIYAGIKLLIATFIVLP
                     LLPDRPLDPLEILNPHQLWLLVILIAGLSLLGYVAVRLLGQTRGTAVTGIFGGMVSST
                     AVTLSFSRRSRDQGGRLPGDALAAGILLAWMVMFLRVFVEVFVVHRPLLLKLALPLGV
                     MAGTSAAAGLVLFRRGVDHATPEADEVPLRNPFSLTAAAKFAAVFAVIMLAVGLAERL
                     LPPRGMYVVAALAGLTDMDAITLSMAEFARTNGETGVAALAITIAALSNTLVKGGMVL
                     ALGSGSLKRRVGIGMALVVAAGLGALLLV"
     gene            complement(1997..3178)
                     /locus_tag="VGA78_12470"
     CDS             complement(1997..3178)
                     /locus_tag="VGA78_12470"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX9894734.1"
                     /translation="MSDPIPFLTSLGQALATLGLYNEGHPARERALHSSHESLLRLLE
                     SEADCRFSFLTGEVVYGNRLLREFREWEWAGRLAGIGVERVEFLPPIAFDDFDRFVST
                     VYDRLRGDPQSPLLAPSQAPTGIRYGRVAILGDSAGQVTDQPVVTTVPFTLDKELECI
                     GWIHEEVTQTDDLPLVETETVVRSLALAMHQEGQVVLPLLELKRFDQYTTTHSFNVAV
                     LTMGLSEYLGYAPREVRVLGVAALLHDIGKVKVPAEVLLKPGKYTPEERKVIETHPVE
                     GARIIMTRHRNMELAATVAYEHHINLDGSGYPQYVFPREAHFASKLVHVCDIYDALCA
                     KRPYRDAIQPDLALTIVEDMSGRHLDPDLVNAFVTMVRQAKGRRMPVDEAKVEVTAKA
                     I"
     gene            complement(3175..>4844)
                     /locus_tag="VGA78_12475"
     CDS             complement(3175..>4844)
                     /locus_tag="VGA78_12475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894735.1"
                     /translation="VALEPLPLDQLELGEGSGRPAERQAEKVWRGLVHAALLLAQESS
                     GGGSTTADGKPIEVDSVSGAQIANAIKSRRNDKAYNREVLDWVIQAGEKVRGLDQSSR
                     VRQAVDGLFAALDRATLGDMMNVGATAEERKAIVRRGARSLPVKTVLDLLDAAATLSE
                     KIMSHTLLRLLGKLAGHVDTARGPIVVGAEDVLRDSVRQLVGEWDEEDPSAHSHRDLL
                     ALLARPGGVSRGGASGKAEAGSLRVAQMGLELGVDTAERNQALVNVRGQIRLVEMLDL
                     IDRGSAARISVDGIWKVVGDPTYLSGLLLDEAQDVVPVERVLEHMGHDALNPLLEALE
                     AAEGASRRRWLLRRIQEFGDVTGPRIVARLPGKPWFVQRNLLNLLGTLHSIPPQFRPE
                     EYAAHDDSRVRREAYKLLFANPESRSDAVVRAAGDQDTGIVRLALSAALEQCPQELTA
                     RLLEYLGGRYRDQDIRLLAIRLIGKRPTTGGRDWLLRRVASQRGWGPFRRLRLEHKSP
                     EVIAVLVVLRQQFADHAGAASVLRMAEASKDTEIRAASRGVSPGALG"
BASE COUNT          799 a         1712 c         1592 g          741 t
ORIGIN      
        1 aaacccggaa tgctggattc gtcgcagaat gtggatgccc caatcctgca ccgcggcttc
       61 ctggtagcgc aggctcttga acgggatccg cagctcgacc tcgtacccgc cttcgaccag
      121 ccggccccgg gattcgaaca cgtaatccgg attgagatcg accgtgccgt cgagcgggtt
      181 catgctgccg gtgccgccgc ccgtggcgga cgcgccgccg gcgccgccgc cgaactgatc
      241 gctccgggtg ccgtcctgct gcacgcccag ggcgttcacc ccgaacagga aggcgatccg
      301 gcggtcgttg ttggtgtcga gcaggatctg gacgtgatct tcgctggcga tgttgtcgcg
      361 attggcgcgg gtggcccgca ccacgttgcc gtgcagctcc cgggcccgga tcccgaacca
      421 gatggcgtcc ggcgcgtacc agacccggac ctcggtgggc tcctccgcgg cccggccatc
      481 gaccggctga aactgcgaga aatcggtcaa gcgcgcggcc gtggcccaca ccggctcgtc
      541 gagccggccg tcaaccgtcg cctcggcttc gagccgggga atggggacct tgatccggtt
      601 ggcgcggccg ctatgggccg agctggtgtc ctggacggag gccaggagca tgaggctgag
      661 gatgatcacg ggacagcaat gtagtcgtac tcagtactcg gcactcagta cgcagtactg
      721 tgggttagac gagcaacaga gccccgagac cggccgccac caccagcgcc ataccgatgc
      781 cgacgcgtct cttgaggcta ccgctgccca gagccagcac catgccgcct ttgaccagcg
      841 tgttgctgag cgcggcgatg gtgatcgcca gcgcggcgac cccggtttca ccgttggtcc
      901 gggcaaactc cgccatcgac agggtgatgg catccatgtc ggtcagtccg gccagtgccg
      961 ccacgacata catgccccgg ggcggcagca gccgctctgc cagccccacg gccagcatga
     1021 tcaccgcgaa caccgccgca aacttggctg cggccgtgag gctgaaggga ttccgcaacg
     1081 ggacctcatc cgcctccggc gtcgcgtgat cgaccccgcg gcggaagaga accagtccgg
     1141 ccgcggcgct ggtgcccgcc atgaccccga gcggcagcgc cagtttcagc agcaggggcc
     1201 ggtgcaccac gaacacttcg acgaagaccc gcaggaacat caccatccag gccagcagga
     1261 tgccggccgc gagcgcgtcg cccggcagcc gccctccctg atcccggctg cggcgggaga
     1321 acgacagggt caccgcggtg ctcgacacca tgccaccgaa aatcccggtg accgcggtgc
     1381 cacgggtctg ccccagcagc cgcaccgcca cgtatcccag cagggacaag cccgcgatga
     1441 ggatgaccag cagccagagc tgatgcgggt tgaggatctc gagcggatcg agaggacggt
     1501 cggggagcag cggcaggacg atgaaggtgg cgatcagcag cttgatcccg gcgtagatgt
     1561 cgtcctcgcc gatccgggcc accgcgccgt ggagctgaac cttgaaggcc aggaccgccg
     1621 cggtggtgat gcccaatccc acggccagcg ccggccaccc gaacatcacc aggccgccga
     1681 gcaggacggt caccagcgcc gcgacctcgg tggtgagccc ggccgtggcg gtgccggctc
     1741 gcagggtgag gccgtagccg gtcaggacca gcgccgccgc cgccaccagg gcgagagcga
     1801 agatccaggt cgcctggagc tcgaccgaga tccaggccga gatcgcgccg gccatggcga
     1861 gcagaatgaa ggtgcggatc ccgcccagcg cctggtacgg ctcggcgctc ttccgcttct
     1921 cgcgctccat cccgatcagg gcgccgatgc cgagcgcaat cgcgaagttt cgaacgtcgg
     1981 tagggtccac ggagcgtcaa atggctttcg cggtcacttc caccttcgcc tcgtccaccg
     2041 gcatccgccg acccttcgcc tgccgtacca tggtgacgaa ggcgttgacc aggtcgggat
     2101 cgaggtgccg cccgctcatg tcttccacga tggtcaaggc gaggtccggc tgaatcgcgt
     2161 cacgataggg ccgcttggca cagagcgcgt cgtagatgtc acacacgtgg accagcttgc
     2221 tggcgaaatg ggcctcgcgc gggaagacgt attgcgggta gccgctgccg tcgaggttga
     2281 tgtgatgctc gtaggcgacc gtggcggcga gctccatgtt gcggtgccgg gtcatgatga
     2341 tgcgggcgcc ttccaccgga tgggtctcga tgaccttgcg ctcttccggg gtgtacttgc
     2401 cgggcttgag cagcacctca gcgggcacct tgaccttgcc gatgtcgtgc agcagcgcgg
     2461 ccacccccag cacccgcacc tcgcgcggcg cgtagcccag atactccgac aagcccatcg
     2521 tcaacaccgc tacgttgaac gagtgggtgg tcgtgtactg gtcgaagcgc ttgagctcca
     2581 gcaacggcag caccacctgc ccttcctggt gcatcgccag cgccagcgag cggaccacgg
     2641 tttcggtttc caccagcggc aagtcgtcgg tctgggtgac ctcctcgtgg atccagccga
     2701 tgcactccag ctccttgtcc agggtaaagg ggacggtcgt gaccaccggt tggtcggtca
     2761 cctgccccgc cgagtcgccc aagatggcga cccggccgta gcggatcccg gtgggcgcct
     2821 gggagggtgc cagcagcggc gattggggat cgcccctgag ccggtcgtag acggtagaga
     2881 cgaaccggtc gaagtcgtcg aacgcaatcg gcggcagaaa ctccacccgc tcgaccccga
     2941 tgccagccag ccgtccagcc cattcccatt cgcgaaactc ccgcaacagc cggttgccgt
     3001 agaccacctc accggtgaga aaggagaagc ggcaatcggc ctcggattcg aggagacgga
     3061 gcaaggactc gtggctgctg tggagggccc gttcccgggc ggggtggcct tcgttgtaga
     3121 ggcccagcgt cgccagcgcc tggcccagcg aggtgaggaa cgggatcggg tcgctcaccc
     3181 caacgccccg gggctcacgc ctcgtgatgc ggcccggatc tcggtgtcct tgctcgcttc
     3241 ggccatccgg agcacgctgg cggccccggc gtggtccgcg aactgctggc gcaggaccac
     3301 cagcacggcg atcacctcgg gggatttgtg ctccagccgg agacgccgga acggtcccca
     3361 gccccgttgc gacgcgaccc gccgaagcag ccagtcgcgc ccgccggtgg tgggccgctt
     3421 gccgatgagc cggatcgcca gcagacggat gtcctggtcg cgatatcgcc cgcccaagta
     3481 ctccagcagc cgagcggtca gctcctgggg acattgctcc agcgcggcgg acagggccag
     3541 ccgcacgatc ccggtgtcct ggtctcccgc ggcccgcacc accgcatccg accgcgattc
     3601 cggattggcg aagagcagct tgtaggcctc gcgccgcacc cgcgagtcgt cgtgggcggc
     3661 gtactcctcg ggacggaact ggggagggat gctgtgcagg gtgccgagca ggttgagcag
     3721 gttgcgctgc acgaaccagg gcttgccggg taggcgggcc acgatgcgcg gaccggtgac
     3781 atcgccgaac tcctggatcc ggcggagcag ccagcgacgc cgtgatgccc cttccgccgc
     3841 ctcgagcgcc tccagcagcg ggttgagcgc gtcgtgcccc atgtgttcca gcacccgttc
     3901 caccggcacc acgtcctgcg cctcgtcgag cagcaagcca ctgagatagg tggggtcgcc
     3961 gaccaccttc cagatcccgt ccaccgaaat ccgggccgcg ctgccgcggt cgatcaggtc
     4021 cagcatctcc accagtctga tctgcccccg cacgttcacc agcgcctggt tccgctcggc
     4081 cgtatcgacg cccagctcga gacccatctg ggctacccgc agcgatccag cctcggcctt
     4141 gccgctggcg ccgccccgac tcacaccgcc cggccgcgcc agcagcgcca gcagatcgcg
     4201 gtgggaatgg gccgagggat cctcctcgtc ccattcgccc accagttgcc gaaccgaatc
     4261 acgcagcacg tcttccgcac ccaccacgat gggaccccgc gcggtgtcga cgtgtcccgc
     4321 gagtttcccc aggagccgca gcagcgtatg cgacatgatc ttctcggaga gcgtcgcggc
     4381 ggcgtcgagc agatccagca ccgtcttgac cgggagcgac cgggcccccc ggcgaacgat
     4441 cgccttccgc tcctccgcgg tggcgccgac gttcatcatg tccccgagcg tagcgcggtc
     4501 gagggccgca aacaaaccgt ccaccgcctg gcgcacccgg gaggattggt ccaggccacg
     4561 caccttttca ccggcctgga tcacccaatc aagcacctcc cggttgtagg ctttgtcatt
     4621 ccggcgggat ttgatggcat tcgcgatctg ggcgccggag acggagtcga cttcgatcgg
     4681 tttgccgtcc gccgtggtcg agccgccgcc cgagctctcc tgcgccaaca gcagcgcggc
     4741 atgcaccagt ccccgccaga ccttttcggc ctgccgctcg gcaggccggc cgcttccttc
     4801 acccagctcc agctgatcca gcggcagcgg ctctagagct acat
//
LOCUS       DASWKS010000440         5360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1330714, whole genome shotgun sequence.
ACCESSION   DASWKS010000440 DASWKS010000000
VERSION     DASWKS010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1330714"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1559)
                     /locus_tag="VGA78_12480"
     CDS             complement(<1..1559)
                     /locus_tag="VGA78_12480"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX9894736.1"
                     /translation="MFRGGPAHLGVYDAPLGTALAGLQWRFDTQGGVIGSPAIRGDTV
                     WVGSGDGRVYALALSSGALLWSFNLTTPIASSPAVAGDVVVIGARDGRFNGLNARTGE
                     PLWSVETGTDLPLPWGHESGDRFTSSPAIVNDLAVVAAGDGVVRALEWRTGRERWHTE
                     TGTRLRSSPAVADGRVFIGGVDGRLYAFDLASGTRLWAFATEGATLQSEHYGFDRRTI
                     QSSPAVQRGTVYVGARDGFLYAVSADSGVLRWRFDHQISWIISSPAVADDVVYAGSSD
                     GQFIQAVDAETGVERWRRPTGSIVWSSPAIVGQQLLVGDGRGRVLALDRMTGDPRWEF
                     FTGGQVFSSPVPAGRQVVFGSVDGGVYALCTGDPVTLERAVYPGRGGTPADSVAGLVT
                     AALQVRGYQVLDDQKLIAVLTAAVADGRLATVVFASDDLPPEIVTEPVEQSLFRRFLD
                     AGGKAVWTSIPPLLWPRDSTGQRLQGLAGLTWDRPAQLLGVSHAAAIFDRRSVEPTDP
                     GRRWGLSGRWR"
     gene            1796..2926
                     /locus_tag="VGA78_12485"
     CDS             1796..2926
                     /locus_tag="VGA78_12485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894737.1"
                     /translation="MRALLLALQVLGVSQAMAQETAFSRLVARFSEAGGFFDSDNLVS
                     NETSYLHVLGAFDSLGVRGGAYVGVGPEQSFSYIARIKPEIAFLVDIRRDNLLLHLLF
                     KAMFERSRNRMEFLGLLYGRRAPDDLAMWTDLPLGDLLVRLDETPYDSMLHGRQHTQL
                     MARVTEYGVPLTEEDRQTLRRFHDEFASMGLDIRFSSRGRPYRFNYPTARQLYLQTDL
                     EGHAGSYLASEDGFRVVRELERRDRVIPVVGDLAGPSAIKSIGEYLVETARKVSVYYV
                     SNVEMYLFRQGGFPRFVENTRALPAGSNSVMVRSYFGRGGMHSQAVPGHLSVQLLQTF
                     RSFLETTAQPDSLTYWDFVNLGHIDLRSPSRPAAALVPQRPN"
     gene            2994..3206
                     /locus_tag="VGA78_12490"
     CDS             2994..3206
                     /locus_tag="VGA78_12490"
                     /inference="COORDINATES: protein motif:HMM:NF018961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HEX9894738.1"
                     /translation="MSSIVKVIEIIAQSDKSWDDAAQAAVAEASKTVKQIKSVWVDNF
                     SGEVEGNRIVRYRVNVKISFLVEGHK"
     gene            complement(3297..5312)
                     /locus_tag="VGA78_12495"
     CDS             complement(3297..5312)
                     /locus_tag="VGA78_12495"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9894739.1"
                     /translation="MLRVLLVATAILFAPFSQSGSAILAQQAAGAAKTPRPMTPDDVI
                     GMKGVSDAQISPDGKWVAYVVSTADFKENGYDADLWLVATAGGAPLRLTTSTKTDNSP
                     RWSPDGRKIAFLSSREERAQVWIISPTGGEAEKLTDSKVGVQAFAWSPDGSRIAYVAQ
                     RDSTAEEQRRRKERDDAQVVDADFRFTRIWVIELASKKAEELVAGEFQATDPRWSPDG
                     TQIAYVATPTPKADDSGLSDIYVLDLAGRKSRKLVENPGPDGAPRWSPDGRTIAYLSR
                     IDGKRATGQQDLMMVPAEGGTPHAVNSDFLPQPGAVTWSPDGRTLWFTATVRTTSELF
                     SVAAAGGQPRQLSDTRGVMSPITLASDGRTVAFTRSDVQSPTDVYVATTGVQPRKLTD
                     HNPEVHTLALGRSEVVRWKSTDGMEIEGLLIYPPDYQAGKSYPTMAFIHGGPSGVWTQ
                     AFPASWGNYGHVWAGNGWVAFYPNVRGSSGYGEKFLLSNVRDWGGGDYRDIQSGLDEL
                     VRRGVADPARLGQSGWSYGGYMTAWTLTQTDRFKGVMVGAGLTNMYSMYSTNDLQTTL
                     EEYFGAEPWDDEEAYRRASAMVYIKQAKTPTLIMHGANDQRVPVGQAQELYMGLRKND
                     VPVELVMYPRQGHGIAEPRLQLDKMKREYAFFAKRVLGVEQKRDLIP"
BASE COUNT          882 a         1808 c         1764 g          906 t
ORIGIN      
        1 tcgcgccagc ggccactcag gccccagcgg cgaccgggat cggttggctc gacgctgcgc
       61 cggtcgaaga tcgccgcggc gtgcgacacg cccagaagct gggccggacg atcccaggtg
      121 aggcccgcca ggccctgcag ccgctgaccg gtggaatcac ggggccacag caggggcggg
      181 atactggtcc acaccgcctt gccgccggca tcgagaaagc ggcgaaagag cgattgctct
      241 accggctcgg tgacgatctc cggcggcagg tcgtcgcttg cgaacacgac ggtggcgagc
      301 cggccgtcgg cgaccgcggc ggtgaggacc gcgatgagct tctggtcgtc gagtacctgg
      361 tagccgcgga cttggagcgc tgccgtcacc aggccggcga ccgaatccgc cggtgtgccg
      421 ccccggccgg ggtagacggc gcgctccagc gtgaccggat cgccggtaca gagcgcgtag
      481 acaccgccat ccacgctgcc gaagaccacc tgacgtccgg ccgggaccgg tgaggaaaac
      541 acctgcccgc cggtgaagaa ctcccagcgc ggatcacccg tcatccggtc caacgccagg
      601 acccgtcccc ggccgtcgcc caccagcagc tgctggccca cgatggccgg tgaggaccag
      661 acgatgctgc cggtgggccg gcgccagcgt tccaccccgg tttcggcgtc gacggcctgg
      721 atgaactggc cgtcggagct gcccgcatac acgacgtcgt ccgccaccgc gggcgacgag
      781 atgatccatg agatctgatg gtcgaaccgc cagcgcaaga cgccggagtc ggcggatact
      841 gcatacagga aaccgtcccg ggccccgacg tatacggtgc cccgctgcac cgccggggag
      901 ctctggatgg tgcgccggtc gaatccgtag tgctccgact gcagtgtcgc gccctcggtg
      961 gcgaaggccc acagtctggt tccgctcgcc aggtcgaagg cgtagagccg cccgtcgact
     1021 cctccgatga acacccgccc atcggccacg gccggtgagg aacgcagccg ggtgccggtc
     1081 tcggtgtgcc agcgttcccg accggtgcgc cactcgagcg ctcgcaccac cccatcgccg
     1141 gccgcaacaa cggccagatc attcacgatc gcgggggacg aggtgaaccg gtcgccgctc
     1201 tcgtggcccc acggcagcgg caagtcggtt ccggtctcca ccgaccagag cggttcgccg
     1261 gtccgggcgt tcagcccgtt gaaccgtccg tctcgcgcgc cgattacgac gacgtcgccc
     1321 gctacggcgg gggaggaggc aatcggggtc gtcagattga agctccacag cagggcgccg
     1381 ctggagagcg cgagggcgta cacccgccca tcaccgctcc caacccagac ggtatcgccc
     1441 cggatggcgg gcgatccgat gacaccgccc tgggtatcga agcgccactg caggccggcc
     1501 agggcggtcc ccagcggcgc gtcgtacacg ccgagatgag ccgggccgcc ccggaacatc
     1561 gccgctggcc tgacgggggc gccttcgcct cgagcacagc ccgctaggca gacgaggatg
     1621 ccgaggtcgc gtttcaaccc gggtcgcttc attcgcagtc agtgtgggat cttcttttca
     1681 tgacgaccgt tcgatcggga agtttccgcc cgcccgtccg tccgaccgtc cgcccgtcct
     1741 accgtctgtt gcccgcctgt cgtattctcc ggaggtcttt tcggtggaat ggtgaatgcg
     1801 cgcgctgctg ctggctctgc aggtcctggg cgtttctcag gccatggcgc aggagacggc
     1861 cttctcccgc ctggtcgccc ggttctccga ggccggcggc ttcttcgaca gcgacaacct
     1921 ggtctccaac gaaacgtcgt acctccacgt gctgggggcg tttgactcgc tgggggtgcg
     1981 gggcggggcc tatgtcggcg tggggccgga gcagagcttc agctacattg cgcggatcaa
     2041 gcccgagatc gcgttcctgg tggatatccg gcgcgacaac ctgctgctgc atctcctgtt
     2101 caaggcgatg ttcgagcgct cccgcaaccg gatggagttc ctgggcctgt tgtacggtcg
     2161 acgggccccg gatgacctgg cgatgtggac cgacctgccg ttgggcgacc tgctcgtccg
     2221 actggatgag acgccctacg attccatgtt gcatggccgg cagcacaccc agctcatggc
     2281 acgggtcacc gagtacgggg ttcccctgac cgaggaagac cgccagaccc tgcgccggtt
     2341 ccacgacgag ttcgccagca tgggcctgga tatccggttc tccagtcggg gccgtcccta
     2401 ccgattcaat tatcccaccg cccgacagct ctacctccaa accgatctgg agggacatgc
     2461 cggcagctat cttgcttcgg aggatggctt ccgggtggtg cgggagctgg aacgacgcga
     2521 tcgggtgatt ccagtggtgg gcgacctggc cggtcccagc gcgatcaaga gcatcggcga
     2581 gtacctggtc gagaccgccc ggaaggtgtc ggtctactat gtctcgaacg tcgagatgta
     2641 tctcttccgt cagggaggct tcccccgctt cgtggagaac acgcgggccc tcccggccgg
     2701 ttccaacagc gtgatggtgc ggagctactt cggccggggc ggcatgcact cgcaggcggt
     2761 gccgggccat ctgagcgtgc agttgctgca gaccttccgg agcttcctcg agacgacggc
     2821 ccagcccgac agcctcacct actgggattt cgtgaacctg ggtcacatcg acctgcgatc
     2881 gccctcgcgt cctgccgcag cgctggtgcc gcagcggccc aactgacagg actgagtact
     2941 gagtactgag taaccgccgc actcttaaac gcgcctcgaa aaggagtcat cccatgagca
     3001 gcatcgtgaa ggtgatcgag atcatcgcgc agtccgacaa gagctgggat gacgccgccc
     3061 aggccgcggt ggccgaggcc agcaagacgg tcaagcagat caagtcggtc tgggtcgaca
     3121 atttcagcgg tgaagtggaa ggcaaccgga tcgtccgcta ccgggtgaat gtgaagattt
     3181 ccttcctggt ggaaggacac aaataaacag tactgagtac tgagtactgg gtactgagta
     3241 ctgaggcctc gaccccccaa ccccaacact cagtactcag tactcagtac tgccagttag
     3301 ggtatcaagt cccgcttttg ttccaccccc agcacccgct tcgcgaagaa ggcgtactcc
     3361 cgcttcatct tgtcgagctg cagccggggt tcggcgatgc cgtggccttg ccgcggatac
     3421 atcaccagct ccaccgggac gtcattcttg cggagcccca tgtacagctc ctgcgcctgg
     3481 cccaccggca cccgctgatc gttggcgccg tgcatgatca gggtcggggt cttcgcctgc
     3541 ttgatgtaga ccatggctga cgcccggcga tacgcctcct cgtcgtccca gggctcggcc
     3601 ccgaagtact cctccagcgt ggtctgcagg tcgttggtcg aatacatcga gtacatgttg
     3661 gtgaggcccg ccccgaccat gacccccttg aagcggtcgg tctgggtgag cgtccacgcg
     3721 gtcatgtagc cgccgtagct ccagccgctc tggcccaggc gggccggatc ggccacgccc
     3781 cggcgtacca gctcatcgag cccgctctgg atgtcgcgat agtcgccgcc gccccagtct
     3841 cgaacgttgg agagcagaaa cttctcgcca tatcccgacg agccccgcac gttggggtag
     3901 aacgccaccc agccgttccc ggcccagaca tggccgtagt tgccccagct tgccgggaag
     3961 gcctgggtcc agaccccgga cggaccaccg tggatgaacg ccatggtggg atacgacttc
     4021 cccgcctgat agtcgggcgg atagatcagc agcccttcga tctccatccc gtcggtgctc
     4081 ttccaccgca ccacttcgct ccggcccagg gccagggtgt gcacttccgg attgtgatcg
     4141 gtgagcttgc ggggctgaac ccccgtcgtc gcgacataca cgtcggtggg actctggaca
     4201 tcactccgag tgaaagcgac ggtgcgcccg tccgacgcca gggtaatggg gctcatgacc
     4261 cccctggtat cggagagctg ccggggctgc ccgccggcgg cggcgacact gaagagttcc
     4321 gaggtggtcc ggaccgtcgc ggtgaaccag agggtgcggc catcggggga ccaggtcacg
     4381 gctccaggct ggggcaggaa atcggagttc accgcgtgag gggtacctcc ctccgccggc
     4441 accatcatca ggtcctgctg gccggtcgcc cgcttgccat cgatgcggct caagtaagcg
     4501 atcgtgcgcc cgtccggtga ccagcgcggc gcgccatccg gaccgggatt ctcgaccagc
     4561 ttccggctct ttcggccggc gaggtccagc acgtagatgt cggacaaacc ggaatcgtcg
     4621 gccttgggtg tgggggtcgc gacgtaggcg atctgggtcc cgtcgggcga ccagcgcggg
     4681 tcggtcgcct gaaactcccc tgccaccagc tcttcggcct tcttgctggc cagctcgatc
     4741 acccagatcc gggtaaagcg gaagtccgcg tccaccacct gggcatcatc ccgttccttc
     4801 cggcgccgtt gttcctcggc ggtcgagtcc cgctgggcca cgtaggcgat ccggctgccg
     4861 tccggcgacc aggcgaatgc ctgtactccc actttggaat cggtgagctt ctccgcctcc
     4921 cccccggtgg gcgagatgat ccagacctgg gcccgctcct cccgcgacga gaggaaggca
     4981 atcttcctgc cgtcgggaga ccagcgggga gagttgtcgg tcttggtgct ggtggtgaga
     5041 cggagcggcg cgccgccggc ggtggcgacc agccaaagat cggcgtcgta cccgttctcc
     5101 ttgaagtcgg cggtcgacac cacatacgcc acccatttgc catcgggtga gatctgggcg
     5161 tccgagacgc ctttcatccc gatcacgtcg tcgggtgtca tgggacgggg agtcttggcc
     5221 gcaccggccg cttgctgcgc caggatagcg ctgcccgact gggagaacgg cgcgaacagg
     5281 atcgcggtcg cgaccaggag aacgcggagc atgggagagc cctcgatagc cgggggggaa
     5341 ggtgcggaag ctgctcggaa
//
LOCUS       DASWKS010000441         2357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3540443, whole genome shotgun sequence.
ACCESSION   DASWKS010000441 DASWKS010000000
VERSION     DASWKS010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3540443"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2336)
                     /locus_tag="VGA78_12500"
     CDS             complement(<1..2336)
                     /locus_tag="VGA78_12500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894740.1"
                     /translation="MNVRPPRRWLEALEVTPNSVTLEVGGSQAFSAQARWNDGGTQKP
                     QVVWSATGGTINSEGWFTAGSATGNHKVIARDKLGTLADTAFVSVREPTMVGLDVRPA
                     SADLAPDANLQFTATARMSNGELRSVGASWSATGGSVTSQGLYTAPHGAGTYFVAAAV
                     TGTGFADTAAVTVSIPQATLTQLVLNPSSVQVPAGLSRQFAVSALYSDGSTRTPPVQW
                     SATGGSITSGGLYTAGAVQGPFRVVALEPASGKADTSAVQVSSPGWVTLSLSPNSGTL
                     LPGETLQFSTTGQLSDGSSGTASVIYSAAGGTISTGGLYTAGSAAGTFQVIARDPDGT
                     VADTSLVTIGALEPVLTDIELWPASIVLPLDALYQFQVTGTWTNGGTSKPSVTYSATG
                     GTILSYGVYRAPTTPGTYRVFATQTGGTLRDTSVVTVTTAAATPTLTAIAVSPATVTL
                     STGATQQFTASGTWSDGSTTPPAVTWSASGGTVTSGGLYAAPATPGTYQVTATQTAGT
                     LSASAPVTVQSGVTLVGVVLSPDSTTLQSGATKQFSAVGRYSDGSTSPASPNYSATGG
                     SITANGLYTAGGTGGTFRVIAVTGGFADTSVVIIQTGGPPTLVGIDVVPSSLAMFTGG
                     GQQFSASGRFSDGSTGPVSVTWTATGGVVTSAGLYTAGTSAGTFRVLAAATVGSKADT
                     AVVTITQAPPPGQYQTLFKKDWSTYADETALNGVVWVENHWNDLLEPKLPATDFYDLV
                     PDPIFGKVVRYLGAVRLNSYPLVVEAVNPGTAGNLITIT"
BASE COUNT          373 a          793 c          801 g          390 t
ORIGIN      
        1 gtgatcgtga tgaggttccc agccgtgccc gggttcacgg cctcgaccac gaggggatac
       61 gaattgaggc ggacggcacc gaggtagcgg acgaccttcc cgaagatcgg gtccggcacc
      121 aagtcgtaga agtcggtggc cggcagtttg ggctccagca aatcattcca atgattctca
      181 acccagacca ccccattcag ggctgtctcg tccgcgtagg tactccagtc cttcttgaag
      241 agcgtctgat actgccctgg gggaggtgcc tgcgtaatcg tcaccaccgc cgtgtccgcc
      301 ttcgatccca ccgtggccgc cgcaaggacc cggaatgtcc ccgcactggt ccctgcggtg
      361 tagagacctg cgctggtcac cactccgcct gtggctgtcc aggtcaccga taccggcccg
      421 gtcgagccgt cgctgaaccg gcccgaggcc gagaactgct ggccgccgcc ggtgaacatc
      481 gccaagcttg aaggaaccac atcgataccg accaaggtgg ggggcccgcc ggtttggatg
      541 atcaccactg aggtgtccgc gaacccgccc gtcacggcga tcactcggaa ggtgccgcct
      601 gtgcccccgg cggtgtaaag cccgttcgcg gtaatggagc caccggtcgc ggaatagttg
      661 ggcgacgcag ggctcgtgct gccatcggag tacctcccga cggcggagaa ctgcttggtt
      721 gctccgctct ggagcgtcgt cgagtcgggg gacagcacga cgccgaccag cgtcactccg
      781 gattgcaccg tgaccggtgc actcgcgctc agggtcccgg cggtctgcgt cgcggtcacc
      841 tggtaggtgc ccggcgtcgc cggagccgcg tagaggccgc cgctggtgac ggtaccgccc
      901 gatgcactcc aggtgacggc gggaggcgtc gtcgagccgt cggaccaggt tcccgacgcg
      961 gtgaactgct gggtggcgcc ggtcgaaagc gtgaccgttg ccggcgaaac cgcgatcgcg
     1021 gtgagagtcg gagtcgcagc ggcggtcgtc accgtcacca ccgaagtgtc tctcaaagtg
     1081 ccacccgtct gagtggcaaa gacgcggtag gtgcccggcg tcgtcggggc ccggtagacc
     1141 ccgtaagaga ggattgtgcc cccggtggcg ctgtacgtca cagagggctt ggaggttccg
     1201 ccgttggtcc aggtgccggt gacctggaat tgatacaatg catccaacgg caagacgatc
     1261 gacgccggcc agagctcgat gtccgtcagg accggctcca acgctccgat cgtcaccagg
     1321 ctggtatcgg cgacggtccc gtcggggtcc cgcgcgatga cctggaaggt tccggccgca
     1381 gacccggcgg tgtagagccc gcccgtggag atcgtgccgc ccgcggcgct gtaaatgacg
     1441 ctcgccgtgc cggaagaccc gtcgctcagc tgtcccgtgg tcgagaactg cagtgtctcg
     1501 ccgggtagaa gtgtcccact gttgggcgag agcgagaggg tgacccatcc cgggctgctc
     1561 acctgaaccg cgctggtgtc ggccttgccg ctcgccggct cgagcgcgac gacccggaac
     1621 ggaccctgta cggcgcctgc ggtgtacaat cctccggagg tgatcgagcc gccggtggcg
     1681 ctccactgga ccggaggagt cctggtgctg ccatcgctgt acagagcgga caccgcaaac
     1741 tgccggctga gcccggccgg cacctgcacg ctcgagggat tgagcaccag ttgggtgagc
     1801 gtggcctggg gtatcgagac cgtcacagcc gccgtgtccg cgaagccggt ccccgtcacc
     1861 gccgccgcca cgaaataggt gccggccccg tgcggggcgg tgtagagccc ttgactggtc
     1921 accgaaccgc cggtagcgct ccagctcgca ccgaccgagc gcagctcgcc gttgctcatg
     1981 cgagccgtgg ccgtgaactg gaggttcgca tcgggcgcca ggtccgccga ggcgggcctg
     2041 acgtcgagac ccaccatcgt gggctcgcgc accgagacga acgccgtgtc ggcgagagtc
     2101 cccaacttgt cgcgggcgat cactttgtgg ttgccggtgg ccgagcctgc cgtgaaccag
     2161 ccttcgctgt tgatcgtccc tccggtcgcg ctccagacca cctgcggctt ttgcgtgcca
     2221 ccgtcgttcc agcgggcttg cgccgagaat gcctggctcc cgccgacctc cagggtcacc
     2281 gagttcggtg tcacctcgag ggcctccagc caccgcctcg ggggacggac gttcacgtcc
     2341 gtcctgccgg agacacc
//
LOCUS       DASWKS010000442         3037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_600890, whole genome shotgun sequence.
ACCESSION   DASWKS010000442 DASWKS010000000
VERSION     DASWKS010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600890"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VGA78_12505"
     CDS             complement(<1..241)
                     /locus_tag="VGA78_12505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894741.1"
                     /translation="MTRIQGPCVAVAVLLSATTPSVGFAQAPADSGNRRLIEALREFI
                     PEVMRQDGTPGLNIALARGGKIVWQEGFGYADVARK"
     gene            complement(264..2825)
                     /locus_tag="VGA78_12510"
     CDS             complement(264..2825)
                     /locus_tag="VGA78_12510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894742.1"
                     /translation="MTATQLAALKARGIGPALMGGRVSDLALHPTDPFTFYVGLATGG
                     VWKTSDNGDTFSPIFDGQPVASIGAVALSPSAGNVVWVGTGEPNDRNSSGWGNGVYRS
                     TDGGVKWIHAGLAGSKAIARIAPHPTDSNTAYVAAMGDLWSAGGERGLYKTTDGGTTW
                     KLVLSAAAPHDKEVGAGDVVVDPSSPNTVYAALYARRRTPWSFAAGVELTGQDVGGIF
                     RSTDGGTTWSKLSNGLPGQTQRIGLAIYPKNPATLYAVVQSDAAGTQNIDDNKSRAGG
                     VFRTEDRGATWRRVNPLNPRPFYFSQIRVDPENDKRIYVLGFALHVSEDGGVTFREDH
                     FKNVHPDLHAMAIDPRAPERVVMGTDGGVYQSFNRAKAWRHLNNIPSGQFYRINVDQS
                     TPYRICGGLQDNLNWVGPSMVPSKDGIRNSDWINIGGGDGFYCVFDPDNPNLVYTESQ
                     QGYAHRMDLRSGQVKGLRPEPAEGQSAFRFHWNAPLIASRHQRGTMYLAGNRVFELTE
                     RGEKWRAISPDLSTRDLTRMVTTGSGAETYGVVYSLAESPVKGGVLWAGTDDGKVWMT
                     EDGGANWSDLTAGLPAAAKGQWINRLEAGAHDAGVAYLVVSAFRSGTYAPLVYRTADK
                     GRTWQSVAGDLPNDGPARVLREDPRNPGLLYAGTEFGLWASLDQGKHWVKFGGLPTVM
                     VDDILVHPRDHDLVIATHGRSLYLIDDVRPLQELTAEVMAKPAHLFEPRPAVGFYPLE
                     GWADWEGAAVYRGSNPPAGALLNYWVKEPMPDGVSFAVADSAGTPVANLKGQGFPGLN
                     RVVWDLKPTADLLIPYGGEGQKFVRAGTYTITFTAGDVTQKQQVKVSVAAGIETR"
BASE COUNT          464 a         1062 c          982 g          529 t
ORIGIN      
        1 tcttcctggc tacgtcggcg tagccgaagc cctcctgcca cacgatcttc ccgccccgcg
       61 ccagggcgat gttcaatccc ggcgtcccgt cctgccgcat cacttcggga atgaactcgc
      121 gcagcgcctc gatcagccgc cggttgccgg agtccgccgg ggcctgggcg aacccgaccg
      181 acggggtggt ggcggacagc agcacggcaa cggcgacaca aggtccttga atccgggtca
      241 tcgtggcctt ccccacaatc ggttcaacgg gtctcgatgc ctgcagcgac agaaaccttc
      301 acctgctgct tctgggtcac gtcccccgct gtgaaggtga tggtgtaggt cccggctcga
      361 acgaacttct gaccttcgcc gccatacggg atcaggaggt ccgcggtcgg cttgaggtcc
      421 cataccaccc gattcagtcc cggaaaccct tgacccttga ggttggccac cggcgtaccg
      481 gccgagtcgg cgacggcgaa gctgacgccg tccggcatcg gttccttcac ccagtagttg
      541 agcagcgctc cggccggcgg attgctgccc cgatacacgg cggcgccctc ccagtcggcc
      601 cagccctcca ggggatagaa cccgaccgcg ggccggggct cgaacaggtg agccggcttc
      661 gccatgacct cggcggtcag ctcctggagg ggccggacat cgtcgatcag gtagagactc
      721 cggccgtggg tggcgatgac gagatcgtgg tctcgggggt ggaccaggat gtcatccacc
      781 atcacggtcg gcagcccgcc gaacttcacc cagtgcttcc cctggtccag gctggcccac
      841 agtccgaact cggtgccggc gtagagcagg ccgggattcc ggggatcctc ccgcagcacc
      901 cgcgcgggcc cgtcgttagg caggtccccg gccacactct gccaggtccg ccccttgtcc
      961 gcggtccgat agaccagcgg cgcataggtc ccgctccgga acgcgctcac caccaggtag
     1021 gcaaccccgg catcgtgggc acccgcttcc agccggttga tccactgccc tttcgccgcg
     1081 gcggggagtc cggccgtgag gtcgctccag ttagcgccgc cgtcctcggt catccacact
     1141 ttgccgtcgt cggtgccggc ccagagtacc ccgcccttca ccggtgactc ggccagcgag
     1201 tacaccaccc cgtaggtctc ggcgccactg ccggtcgtga ccatgcgggt caggtcccgg
     1261 gtcgagaggt ccggactgat ggcgcgccac ttctcgcccc gttcggtcag ctcgaacacc
     1321 cggtttcccg ccaggtacat ggtgccgcgc tggtgccggc tcgcgatcag cggagcattc
     1381 cagtggaacc ggaaggccga ttgaccctcg gccggctcgg gccgaaggcc cttcacctgc
     1441 ccgctccgca gatccatccg gtgggcgtac ccctgctgcg attcggtgta gaccaggttg
     1501 gggttgtcgg gatcgaagac gcagtagaac ccgtcgccgc ccccgatgtt gatccagtcg
     1561 ctgttgcgga taccgtcctt ggacgggacc atgctgggcc ccacccagtt caggttgtcc
     1621 tgcagcccgc cgcagatccg atagggcgtg ctctggtcca cgttgatgcg gtagaactgg
     1681 cccgatggga tgttgttgag gtggcgccag gccttggccc ggttgaagct ctgatacacc
     1741 ccgccatcgg tgcccatgac gacccgctcc ggggcgcgcg gatcgatcgc catggcatgg
     1801 agatcgggat gaacgttctt gaagtggtcc tcccggaagg tgactccccc gtcctccgag
     1861 acgtgcagcg caaacccgag cacgtagatc cgcttgtcgt tctcgggatc aacccggatc
     1921 tgactgaagt agaagggacg cgggttgagc ggattcaccc gacgccaggt cgccccccgg
     1981 tcctcggtgc gaaacacccc gccggcccgg ctcttgttgt catcgatgtt ctgggtcccg
     2041 gcggcatcac tctgcaccac ggcgtagagc gtagcggggt tcttgggata gatcgccagt
     2101 ccgatccgct gggtctggcc cggcagcccg ttgctcagct tgctccaggt ggtgccgccg
     2161 tcggtgctgc ggaagatccc gcccacgtcc tggccggtaa gctccactcc ggcggcgaaa
     2221 ctccacgggg tgcgacgccg ggcgtacagc gcggcgtaga ccgtattggg gctggaagga
     2281 tcgaccacca cgtcaccggc gcccacctcc ttgtcatgcg gggcggcagc ggagagcacc
     2341 agcttccagg tggtaccacc gtccgtggtt ttgtagagtc cccgctcgcc ccccgccgac
     2401 cacagatctc ccatggccgc cacgtacgcg gtgttcgaat cggtgggatg gggcgcgatc
     2461 cgggcgatgg ccttcgaccc ggcgagcccc gcatggatcc acttgacgcc cccatcggtg
     2521 gagcggtaga ccccgttgcc ccaccccgag ctgttgcggt cgttcggttc cccggtaccg
     2581 acccacacca cattgcccgc cgagggactc agcgcgaccg cgccgatgga ggccaccggc
     2641 tggccgtcga agatgggcga gaaggtgtcg ccgttgtcgc tggtcttcca caccccgccg
     2701 gtggcgagcc ccacgtagaa ggtgaaggga tcggtgggat gcagggccag atccgagact
     2761 cgcccgccca tgagcgccgg cccgatgccg cgggccttga gtgccgcaag ttgggtggcg
     2821 gtcaccggac ccggggtggg cgccggcgcc cctgcctcgc gacgcgttcg ggcttgtcca
     2881 gggagcaggg aggaggaacc agggagcagg aaaagcaccg ccagagaaag ttggatagct
     2941 cgcatatggt ccgatagacg ctgatggttg tttgtcctac tccctgctcc ctactcccta
     3001 ctccctactc cctgctccct gcttcctgct ccctgct
//
LOCUS       DASWKS010000443         5102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2468000, whole genome shotgun sequence.
ACCESSION   DASWKS010000443 DASWKS010000000
VERSION     DASWKS010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2468000"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1573
                     /locus_tag="VGA78_12515"
     CDS             <1..1573
                     /locus_tag="VGA78_12515"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9894743.1"
                     /translation="RKITDQAIDAAVRAMPREYRYTAPAFAATLKQRRDQLPEMARQF
                     YLHLAAGPDIHATDSADRATVIRLEDGSVEVRLQSGNGPPWFRRRFHPSETDEIRVYL
                     HGGDDRAVVTGEVARSMPVRIIGGNGTNELIDSSRVGGRPGQARFYDAGAVSHVEYGK
                     PDTLFDRRPWVRSDGQLAAPGRDRGTAVGPVLGLSAPGDLGLIFQAGLNQSRYGFRVR
                     PYAGRTRLTAEYATGVSAWRITGSVDRRREGTRLHFLTRARMSEFEVINFHGFGNATS
                     AEPAGSFRVEQRQWLLQPAVALALGERSDVTFGPVLQYSTADSIADNFISTSRPYGFG
                     DFGQAGLRLSLHHDRRDRIDEPRNGFLLDLSGDWYPGLWDVNAAFTALGGAATTYYRL
                     PVPLHPILVLRATGRKLFGEFPFHESAFIGGRGSVRVLDLQRYAGDASLSGTTELRVP
                     LARVPLVLPIDLGIYGFADAGRVWFDGESPDGWHAGAGGGLWVGILSPATALSVELGR
                     YRGESRVRVRTGLSF"
     gene            1764..2153
                     /locus_tag="VGA78_12520"
     CDS             1764..2153
                     /locus_tag="VGA78_12520"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9894744.1"
                     /translation="MAIPTPTSLLGELAQVTELWSPRVVAALNGQFLKVAKVQGEFVW
                     HQHDGEDELFLILRGTLRIQFEDGEVTLHEGECLVVPRGVRHRPVAESECWLALFEPA
                     ATTHTGEVVSERTRSIAEQTAHLHRPG"
     gene            2214..2441
                     /locus_tag="VGA78_12525"
     CDS             2214..2441
                     /locus_tag="VGA78_12525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894745.1"
                     /translation="MTPVQRVFRWTAAILALLAIAPGYYAARLRWAPAADFDVTGVLW
                     VLQNLPRLTAFTLTGLCLVGAGYFWVRSLRG"
     gene            complement(2448..3437)
                     /locus_tag="VGA78_12530"
     CDS             complement(2448..3437)
                     /locus_tag="VGA78_12530"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9894746.1"
                     /translation="MQRLGADPATVAAGTTYLRWFVPGLALQFALVTMGSALRGTGVV
                     KPTMIVQMATVVINAILAPMLIAGWLTGKPLGVAGAGLATTIAMVIGVVLMWLSFVRL
                     EKAVGFDPRLWRPDLAVWGRILRIGLPPGGEFALLFVYMGLIYWVIRPFGAEAQAGYG
                     LGSRVMQAIFLPAMAVAFATAPLAGQNVGARKFARVRETFRSAAIVGSGIMLLLTLVC
                     QWRPEWFLRGFTTEGPVIAVGTQFLSVISWNFVAVGLIFTCSGMFQALGNTLPSLLSS
                     ASRILLFAAPAVWMAARPGFTLRRLWFLSVATVTIQAGLSLWLLRREFRHRLG"
     gene            complement(3341..3781)
                     /locus_tag="VGA78_12535"
     CDS             complement(3341..3781)
                     /locus_tag="VGA78_12535"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9894747.1"
                     /translation="MHDLTEGSIARHLVRLAVPLAAGMVFQTLYYLVDIYFVAQLGDT
                     AIAGVGAAGNVQFLVMALTQILGVGTMALIAHAVGRRDLPDANLIFNQSLVLAAIALV
                     GPSWWAVAWRSGTCNGSGPIPPRSRPAPRISAGSSPAWRFSSPW"
     gene            complement(3774..4334)
                     /locus_tag="VGA78_12540"
     CDS             complement(3774..4334)
                     /locus_tag="VGA78_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2239 family protein"
                     /protein_id="HEX9894748.1"
                     /translation="MEEPTQPNCIAFEGPRRIAAGPLGAVALEVKRRVERGDRGPILV
                     FDAETSTRIDIDVRGSEAEVLARLEPRHRGPGRPRLGVVPREVTLLPRHWDWLNGQSG
                     GASVTLRKLVDQARRTSVKSDRVRTARESAYRFMVAMAGDRPGFEEATRALFAGDRAR
                     FKRLVQRWPADIKAHATALMSRTLDA"
     gene            4530..>5102
                     /locus_tag="VGA78_12545"
     CDS             4530..>5102
                     /locus_tag="VGA78_12545"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9894749.1"
                     /translation="MPRALRSTTHRAVKDGLYLQFARIGKACASPHRLELLDLLAQAE
                     RPVEALARETGLGVANTSAHLKLLYQARLVDRRRKGQQVWYRLADLAVRRLLQDLMAL
                     GRKQLAEVEQVVHRYYESPGELEPITPRELRRRLRDGDVLVLDVRPPEEFAAGHIPGA
                     VNIPPDQLRRRLASLPRDRDIVAYCRGPFCL"
BASE COUNT          834 a         1760 c         1702 g          806 t
ORIGIN      
        1 gcgcaagatc acggatcagg ccatcgacgc cgcggtgcgc gccatgcccc gcgagtaccg
       61 gtacaccgcg ccggcgttcg cggccacgct gaagcagcgc cgcgaccagc tcccggagat
      121 ggcccgccag ttctatctcc acctagccgc cggccccgac atccatgcca ccgacagcgc
      181 cgatcgagcg accgtcatca ggctggagga cggttcggtc gaagtgcggc tgcaatcggg
      241 gaacggcccg ccctggtttc gccggcgctt ccatccgtcc gaaaccgatg agatccgggt
      301 gtacctccac gggggcgacg accgcgccgt cgtgaccggt gaggtcgcgc ggagcatgcc
      361 ggtccgcatc ataggcggca acggcaccaa tgaattgatc gattcttccc gcgtgggcgg
      421 ccgcccggga caggcgcgct tctacgacgc gggtgccgtg tcgcacgtgg aatacggaaa
      481 gccggatact ttgttcgacc ggcggccctg ggtccggtcg gacggtcagc tggcagctcc
      541 tgggcgggat cgtgggaccg ccgtcggccc ggtcttgggc ctgagcgccc ccggcgatct
      601 ggggctcatc ttccaggcgg ggctgaatca gtcccgttac ggttttcggg tccggcccta
      661 tgccggacgc acccggctta ccgccgagta tgccaccggt gtgagcgcct ggcggatcac
      721 cggctccgtg gaccggcgcc gcgaaggcac tcgtctgcat ttcctcacac gggcccggat
      781 gtccgagttc gaggtcatca atttccacgg gttcggcaat gcgacctccg ctgagccggc
      841 cgggtccttc cgggtggagc aacggcagtg gttgctgcag ccggcggtgg cgctcgccct
      901 gggcgagcgg agcgacgtca cgttcgggcc ggtgctgcag tactcgaccg ccgacagtat
      961 cgccgacaac ttcatctcga ccagtcgtcc ttacggcttc ggcgacttcg ggcaggcggg
     1021 gctgcgactg agcctgcacc atgaccggcg cgaccggatc gacgagccgc gcaacggatt
     1081 cctgctcgac ctgagcggcg actggtaccc agggctctgg gatgtgaacg cggcgtttac
     1141 cgcgctcggc ggcgccgcca cgacgtatta caggcttccc gtcccgctcc atccgatcct
     1201 ggtcttacgg gccaccggcc ggaaactctt cggcgagttt ccgtttcacg aatcggcgtt
     1261 catcggagga agaggctcgg ttcgggtgct cgatctgcag cgctacgccg gcgacgcctc
     1321 cctgagcggc accaccgagc ttcgggtccc gctcgcccgg gtgccgctgg tcctcccgat
     1381 cgacctcggg atctacggat tcgcggacgc cggccgagtc tggttcgacg gcgaatcgcc
     1441 tgatggttgg cacgccggcg ccggtggtgg attgtgggtc gggatcctga gtcccgccac
     1501 ggcactctcc gtcgagctgg gccggtatcg cggagagagt cgtgttcgag tcaggaccgg
     1561 gttgagcttc tagatcacgc cgatgccgcc gattaccaag tttgttgcgc gacctccgca
     1621 gccgtcggct gagtctcaag cgcttcgtga accatcggcg gcatctgcgg accagacacc
     1681 aatccgccca ttcagtgtcc cggtctgaac tgtttgtgcg cagaagcgtg gcctctcggg
     1741 tactcccccg tgtatcctcc gacatggcta ttcccacccc caccagcctc ctgggcgagc
     1801 tggcccaggt cactgagctg tggtcgcccc gcgtggtggc cgcgctcaac ggacagttcc
     1861 tcaaggtcgc caaggttcag ggcgaattcg tctggcacca gcacgacggg gaagacgagc
     1921 tcttcctgat cttgcgcggg accttgcgga ttcagttcga ggacggcgaa gtgaccctgc
     1981 acgagggcga gtgcctggtt gtgccccgag gggtgcggca tagaccggtg gccgagtcgg
     2041 agtgctggct ggccctgttc gagccggccg ccacgacgca taccggcgag gtagtgtccg
     2101 agcggactcg aagcatcgcg gaacagacgg cgcacctgca tcgccccgga tgatcgcgcc
     2161 tcctccaagc ggtcggtcgg aggggcgtcg cgggtgagtg cttcgaggcg accatgaccc
     2221 cagtacagcg ggtgtttcgc tggaccgcgg cgattctcgc actcctggcc atcgctcccg
     2281 ggtactacgc cgctcgactg cggtgggcgc cggccgccga cttcgatgtc accggtgtgc
     2341 tgtgggtgct ccagaacctg ccccggctca cggcgtttac gctgaccggc ctgtgcctgg
     2401 tcggggccgg ctacttctgg gtgcgctcgc tccgaggctg aagccgacta gccgaggcgg
     2461 tggcggaatt cccggcgcag cagccagagg ctgagccccg cttgaatcgt caccgtggcg
     2521 accgatagaa accagagccg gcgcagggtg aagccgggcc gggccgccat ccagaccgcg
     2581 ggcgccgcga agaggaggat gcggctggcg ctgctcagga gggacggcag cgtgttgcct
     2641 aacgcctgga acatccccga acaggtgaag atcagcccca ccgccacgaa attccaggaa
     2701 atgacgctga gaaactgggt tccaacggcg atcaccgggc cttcggtggt gaacccgcgc
     2761 agaaaccact ccggacgcca ctggcagacc agcgtcaaca gcagcatgat gccgctgccc
     2821 acgatggcgg ccgatcggaa ggtctcccgg acccgggcga acttcctggc cccgacgttc
     2881 tggcccgcca gcggcgcggt ggcgaaggcc accgccatcg ccggcaggaa gatcgcctgc
     2941 atcacccgcg agccgagccc gtacccagcc tgggcctcgg cgccgaaagg gcggatgacc
     3001 cagtagatca ggcccatata tacgaacagc agcgcgaact ctcccccggg cgggagtccg
     3061 atccggagga tccggcccca gacggcgaga tcgggccgcc acagcctggg gtcgaagccc
     3121 accgcctttt ccagccggac gaacgaaagc cacatcagga ccaccccgat caccatcgcg
     3181 atggtggtcg ccagacccgc gcccgccaca ccgagcggct tgccggtgag ccacccggca
     3241 atcagcatgg gggcgaggat cgcgttgatc acgaccgtcg ccatctgaac gatcatggtc
     3301 ggcttgacga cgccggtgcc ccggagcgcc gagcccatgg tcaccagggc gaactgaagc
     3361 gccaggccgg ggacgaacca gcggagatac gtggtgccgg ccgcgaccgt ggcgggatcg
     3421 gccccgagcc gttgcatgta ccacttcgcc aggccaccgc ccaccacgag gggccgacca
     3481 gcgcgatcgc cgcgagcacc aggctctgat tgaagatcag attggcatcg ggcagatccc
     3541 ggcgaccgac cgcgtgggcg atcaacgcca tggtgccgac gcccaggatc tgggtcagcg
     3601 ccatcaccag gaactggaca ttgccggccg cacccacgcc ggcgatcgcg gtgtcgccca
     3661 gctgagcgac gaagtagatg tcgaccaggt agtagagggt ctgaaacacc atgccggcgg
     3721 cgaggggaac cgccagccgg accaggtgcc gcgcgatcga gccttccgtc aggtcatgca
     3781 tccagcgtcc tggacatgag cgccgtggcg tgggctttga tgtcggcggg ccatcgctgg
     3841 accaaccgct tgaaacgggc ccggtcgccg gcgaagagcg cccgggttgc ctcctcgaat
     3901 ccgggccggt cgcccgccat ggccaccata aagcgatagg ctgattcccg cgcggtccgg
     3961 acccggtcgg acttcacgct ggtccgacgg gcctgatcca ccagcttccg cagggtcacg
     4021 gaagcgcccc ccgactgtcc gttgagccag tcccagtgcc gcggcagcag ggttacttca
     4081 cgaggaacga cgccgagcct gggacggccc gggccccgat ggcggggctc gagccgggcc
     4141 agaacctccg cctcgctgcc gcgtacgtca atgtcgatgc gggtgctggt ctcggcgtcg
     4201 aacaccagga tgggcccccg gtccccccgc tcgacccgcc gcttgacctc gagggcgacc
     4261 gcgcccagcg ggcccgccgc gatgcggcga ggaccctcga acgcgatgca attgggttga
     4321 gtcggctctt ccatggcact attttacccg gatattatta ccctgtcaat aatacccggg
     4381 taaaacatgc ccctggaggg cccgagcaat gccggtgccg cccgcgtctc acgaggaagc
     4441 caccgggttg tgccgcgaag gccggtccat tagttattca aagaatcact tgaatacatg
     4501 actatgccat ctctgcccgg ccgccgctga tgccccgagc cctccgatcc accacccacc
     4561 gcgccgtcaa ggacgggctc tacctccagt tcgcccggat cggaaaggcc tgcgccagtc
     4621 cccaccggtt ggagctcctc gacctgctgg cccaggcgga acgtccggtc gaagcactgg
     4681 cgcgggagac cgggctcggc gtggccaata ccagcgcgca cctcaagctg ctgtatcagg
     4741 cccggctggt cgatcgccgc cggaaagggc agcaggtgtg gtatcgcctg gccgacctcg
     4801 ccgttcgccg gctgctgcag gacctgatgg ccctgggccg gaagcagctg gccgaggtgg
     4861 aacaggtggt acaccggtac tacgagtcac ccggcgagct cgagccgatc acaccccggg
     4921 agctgcgccg ccggcttcgc gacggcgatg tgctggtgct cgatgtccgg ccgcccgagg
     4981 agttcgcagc cgggcacatt cctggggccg tcaacattcc ccccgaccag ctgcgccggc
     5041 gtctggcgag tctcccccgc gatcgggaca ttgtcgctta ctgccgcggt ccgttctgcc
     5101 tg
//
LOCUS       DASWKS010000444         1553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_601556, whole genome shotgun sequence.
ACCESSION   DASWKS010000444 DASWKS010000000
VERSION     DASWKS010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601556"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1553
                     /locus_tag="VGA78_12550"
     CDS             <1..>1553
                     /locus_tag="VGA78_12550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894750.1"
                     /translation="EGVQNILYLTAPLHARVKASPTSVRSVLNQSPVPRGVFEGAFRR
                     VARPLGPIRRRQGRAGEAGADRGGLLDRLNRGVLSAAKPPVTSPALPSMSRVADRPVP
                     GAVTEAEVKAAEGRAKGIRVLAWLGLILALVLIVLGLWLPALLSAAVSGGLHLLANRE
                     ARRARDLATRFAAEEQDRKRRVSVRDGQLTGDLVRGVTPPLAYAPAEAPASGAPRTLP
                     TTPPGDPAPAPATVAAVQTALGTMLDRMAPPTTPIRTMVQADFAGLRTALERKLDPKL
                     TLAQAYAGRYTLGGSVLWEPQDPLEPILAGPEFPQPMYRPLADLDNEWLLPGFDKIPP
                     NSATLLKTNQRMIEAYMVGVNHEMARELLWREYPTTQRATYFRQFWDVAGYAAPPGAG
                     LTPEQLKDITPIHTWRPPSDLKEHSPRPPVPGDSPDYLVLFIRGDLLRRYPNTEVYAV
                     KAKWGGAQDGRVIDDPANDTEAAQKIALPLFSGFMNPDANFFGFALTKEQVLGDGIRD
                     GTKPGWYFV"
BASE COUNT          254 a          545 c          512 g          242 t
ORIGIN      
        1 tggagggtgt tcagaacatc ctctacctca ccgccccgct tcacgctcgg gtgaaggcga
       61 gcccgaccag cgtccgatcg gtgctcaacc agagcccggt tccccgggga gtgttcgaag
      121 gcgccttccg ccgggtggcc cgcccgcttg gcccgatacg gcgccggcag ggaagagcag
      181 gggaagccgg ggccgatcgc ggcgggctgc tggatcggct gaaccgcgga gtgctgagcg
      241 ccgccaagcc accggttaca tcgcctgccc tgccgagcat gagtcgagtg gctgataggc
      301 cggtcccggg tgcggtcacc gaggcggagg taaaggcggc ggaagggcgc gccaagggca
      361 ttcgcgttct ggcctggctg gggctgatcc tcgccctcgt actcatcgtc ctgggcctct
      421 ggctgccggc attactgtct gcggccgtga gcggcgggct ccacctgctc gcgaaccggg
      481 aagcccggcg cgcccgggat ctcgccaccc ggtttgcggc ggaagaacag gatcggaagc
      541 ggcgcgtctc ggtgcgggac ggacagctga cgggggatct ggttcgggga gtgactcctc
      601 cgctcgccta cgccccggcg gaagcgccgg cttctggcgc gccgcgcacc cttcccacta
      661 ctccaccagg tgaccctgct ccggcacctg cgactgtcgc agcggtccag acggccctcg
      721 gcacgatgct cgatcgaatg gcgccgccca ccacgccgat ccggaccatg gtgcaggcgg
      781 acttcgccgg gttgcgcacc gcgctggagc ggaaactcga tcccaaactc acgctggccc
      841 aggcgtacgc cggccggtac accctgggcg gcagtgtgtt gtgggaaccc caggatcctc
      901 tcgaacccat ccttgccggc cccgagttcc ctcagccgat gtaccggccg ctcgcggatc
      961 tcgacaacga gtggctgctc cccggcttcg acaagattcc gcccaactcg gccacgctgc
     1021 tcaaaaccaa ccagcggatg atcgaggcgt acatggtggg agtgaatcac gagatggccc
     1081 gggagctgct ctggcgggaa tacccgacca cgcaacgggc cacctacttc cgccagttct
     1141 gggatgtcgc cggctacgcc gcgccgccgg gtgcggggct cacccccgag cagctcaagg
     1201 acatcacacc gatccacacc tggcggccgc cgagcgatct caaggagcac agtccccgcc
     1261 cccctgtgcc aggcgactcg ccggactatc tggtgctctt catcaggggc gatctcctca
     1321 ggcgctatcc caacaccgag gtctatgcgg tgaaggccaa gtggggtgga gcgcaggacg
     1381 gacgggtcat cgacgatccc gctaacgaca ccgaagccgc gcagaagatc gccctccccc
     1441 ttttctcggg cttcatgaat ccggatgcga acttcttcgg cttcgccctc accaaggagc
     1501 aggtgctggg cgacggcatt cgagacggca ccaagcccgg ctggtacttc gtg
//
LOCUS       DASWKS010000445         6096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2468502, whole genome shotgun sequence.
ACCESSION   DASWKS010000445 DASWKS010000000
VERSION     DASWKS010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2468502"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..948)
                     /locus_tag="VGA78_12555"
     CDS             complement(<1..948)
                     /locus_tag="VGA78_12555"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEX9894751.1"
                     /translation="MRRQVLSVLGLAICAACGGDGVVSLDDAPDADVKVAAAEGAGAV
                     FVASNGAAGNAVLVFGRAGDGALTPAISFPTGGLGTGTGLGNQGGLVLTRGDRLLYVV
                     NAGSDEISAFRLTGSSLELLGTFPSGGDLPISLSISGDLLYVLNDGTTANVTGFRIGS
                     DGGLTPIAGSSRALSAAAPDAAQVGFSPDGTRLVVTEKATNQLLTFPVLSDGTLGPAA
                     VQPSAGPTPFGFGFDRRGTLITSEAFGGAPNASVLSSYRAGSGGWTAVTPLVATTETA
                     ACWVVVTPNGRFVYTTNTGSASVSGYAVGHDGSLTLLDPD"
     gene            complement(1012..1737)
                     /locus_tag="VGA78_12560"
     CDS             complement(1012..1737)
                     /locus_tag="VGA78_12560"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX9894752.1"
                     /translation="MRAHDWFTEHLPDYVSRALEPGDEALFRDHLNRCADCREAVARL
                     KSDLSWLPMGVTPVPPRPGFSRRVVDAVTHPPRKRIIWAWPALTAASFLVAVGVWRNG
                     RARITELEALIDQRTVALAAARDTLSVALGPDRVVQATIELEGRHGGMLILADEASHR
                     WKVIVHGIPRAKQGERYTFWFITGDGMVHGAEVDCDENTPAVLLLDMPPGAPIIRGGA
                     LTIELKDADPSIPRGRELAHLEL"
     gene            complement(1734..2369)
                     /locus_tag="VGA78_12565"
     CDS             complement(1734..2369)
                     /locus_tag="VGA78_12565"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894753.1"
                     /translation="MTVPADSPSSHGSAGRPALARLLPSNREDDLRSRIAARDERALA
                     ELVELTSPWLLGIAQGMLQDPDEAEDVVLETFRTAWEKVPGPEDGQRGLVAWLLQVTR
                     NRAIDRLRARKRRLRLRERVASTEERVALPVEPDEAAHPGWHIHASVHLALSQLPDEQ
                     RQAVRLAYFEGQTHSEIAARLDLPLGTVKTRLRLGIGRLRTALAPLKDWVL"
     gene            complement(2432..4021)
                     /gene="ggt"
                     /locus_tag="VGA78_12570"
     CDS             complement(2432..4021)
                     /gene="ggt"
                     /locus_tag="VGA78_12570"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX9894754.1"
                     /translation="MAGRSTVYASNGIIATSQPLATSAGLGVLQGGGNAIDAAVTAAA
                     VLNLVEPHMTGIGGDLFAILWSARERRLIGLNASGRSGSLMTREALSQQGHQTVPMSG
                     AEPITVPGALAGWAALQERHGTLSLAEALAPAISLAERGFPVSPVIAAQWANEVECLV
                     LDPGARATFLIDGQRAPRAGEWHQNPDLATTFQAIAGQGTKAFYGGPLGQRIVDRVRD
                     MGGFLTLEDLARHQSEWVDPVSARFRGHTVWELPPNGQGIAALEMLRILEPYDLKAMG
                     HNSSAYLHHLVEATKLAFADLARWVGDPAAMTIPPTRLLDEGFIQSRRALFDPLRAAE
                     RLEPGAAATASETIYLAAADSDGNMVSLINSIYSNFGSGVVVPGTGFALQNRGAGFTL
                     EPGLANTLAPGKRPLHTITPAFVSTPGAAGEEPWLAFGVMGGSIQPQGQVQVLLNLLE
                     FGMDLQEAIDAARFRHLEGVLVGLEQPIGAEVRRGLEALGHQVDLLPPGAAGGAQAVM
                     RLGRGWAAGSDPRKDGMAAGW"
     gene            4133..4678
                     /locus_tag="VGA78_12575"
     CDS             4133..4678
                     /locus_tag="VGA78_12575"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX9894755.1"
                     /translation="MTSPIYYTAEMVRAMPEDGKRYEVIRGELLVTPVPRQGHQQLVH
                     RLGMALQDYLERERVGHLVMAPADVSWGSRDTLVQPDLFVVPLEDSHAGNGEEFQTLL
                     LVVEVLSSATARADRFTKRREYQSRGVPAYWIVDGEERRVEIWTPEAELPAVVFTEVS
                     WQPEGGRKPFALSLTELFRPL"
     gene            complement(4695..6029)
                     /locus_tag="VGA78_12580"
     CDS             complement(4695..6029)
                     /locus_tag="VGA78_12580"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX9894756.1"
                     /translation="MDAALASLLALLVAIGLSITTRINVGVVAIALAWIIASWAGLGA
                     EAVLRGFPVSLFLMLTGVTLLFACADSNGTLEGLAGRAVRLARGNATVLPLLFFVIAC
                     LVASIGPGSISTVALIVPLAMAVGARAGVPHLLTALMVANGANAGNLSPVSSVGVIAN
                     TKMAEAGLGGHEGKVWFANLVAHLLVALVAWVWFVHRRRHREDHTHGEPEGPRLFSHP
                     EDQRPSSHPEGQRPEGSGPASPVPPFTRVQVVTLLVILAWIVGVLIFKLHLGLSAFAA
                     VALLVGLRAADETQAMKRVPWRILVMVSGVSVLIALLEATGGMDLFTTLLARLATPDS
                     VNGVIALVTGTISVWSSTSGVVLPAFLPTVPGLVEKLGGGDPFAVALSINVGSSLVDV
                     SPLSTLGALCVAAVPDGQEAGRLFRLLLIWGLSMAVIGAVMCQVLAGPLARF"
BASE COUNT         1070 a         2033 c         2074 g          919 t
ORIGIN      
        1 atccggatcg agcagggtca gcgaaccgtc atgccctacc gcatagccgc tgacggaggc
       61 cgacccggta ttggtggtgt agacgaagcg cccgttgggc gtcacgacca cccagcaggc
      121 cgcggtttcc gtggttgcca ccagaggcgt tacggcagtc cagccaccgc taccggcccg
      181 atagctggag agcacgctcg catttggagc gccaccgaag gcctcggaag tgatcagcgt
      241 tccccgccgg tcaaacccaa acccgaacgg cgtcggcccg gccgatggct gaaccgcggc
      301 gggtccgagg gtcccatcgc tcaggacggg gaaggtgagc agttggttgg tggctttctc
      361 ggtcacaacc agtcgggtgc cgtcgggcga gaatccgacc tgggcggcgt ccggcgcggc
      421 cgcggacagg gcgcggctgg atccggcgat gggcgtgagg cctccgtcgg aaccgatccg
      481 gaagccggtg acattggcgg tggtgccgtc gttcaggaca tagagcaagt caccggatat
      541 cgagagcgaa atcggcaggt cacctccgct ggggaaggtt cccaacagct cgagcgagga
      601 tccggtaagc cggaacgcgc tgatctcgtc cgagccggcg ttgactacat acagcagccg
      661 gtccccccga gtcagtacca gccccccttg gttaccaaga cccgtgccgg tgccgagacc
      721 gccggtaggg aatgagatcg cgggggtgag cgccccatca ccggcacgac caaacaccag
      781 gacggcattc cccgcggccc cgttggaggc gacgaacacg gcgccggcgc cttctgctgc
      841 tgccactttc acatcggcgt ccggagcatc atcaagcgac acgaccccat cgccgccgca
      901 agcagcgcag atcgcgagac ccaggaccga cagaacctgc cttcgcatca tttactccag
      961 aagagaaaga tacgaaggaa acgactgcaa ccgtgcggtg gatctttccc gctagagctc
     1021 gaggtgtgct agctcacgcc ctcgcggaat gctaggatcg gcgtctttga gctcgatggt
     1081 gagggcaccg ccccggataa tgggagcgcc gggcggcatg tcgaggagca gcactgccgg
     1141 ggtgttctcg tcgcagtcca cttcggcgcc atggaccatc ccgtctcccg tgatgaacca
     1201 gaaggtgtac cgctccccct gcttggcccg cgggatcccg tggactatca ccttccatcg
     1261 gtggctggcc tcgtccgcca ggatcagcat gcccccgtga cggccttcca gctcgatggt
     1321 tgcttggacg acccgatccg ggccgagggc cactgaaagg gtatcacggg cggcagcgag
     1381 ggcgacggtt cgctggtcga tcagagcctc cagctcggtg atccgggcgc gaccattccg
     1441 ccagacaccc acggccacaa ggaaggatgc cgcggtcaag gcgggccagg cccatatgat
     1501 tcgcttgcgg ggaggatgcg tgacggcgtc caccacgcgg cgcgagaagc ccgggcgggg
     1561 agggactggg gtgacgccca tcgggagcca ggagagatca ctcttgaggc gggccaccgc
     1621 ttcccggcag tcagcgcagc ggttgagatg atcgcggaac agcgcctcat cgccgggttc
     1681 gagagcccgc gatacgtaat cgggcaggtg ttcggtgaac caatcgtggg ctctcataac
     1741 acccaatcct tgagtggcgc gagcgccgtg cgcagtcggc cgatgccgag gcggagtctg
     1801 gtcttgacgg tgccgagggg cagatcgagc cgggcggcga tctccgagtg ggtttgtcct
     1861 tcgaagtagg ccagtcgaac ggcctggcgc tgctcgtccg gcagctggga cagtgccagg
     1921 tgcaccgacg cgtggatatg ccatcccgga tgggccgctt catccggttc gaccggtagg
     1981 gcgacccgct cctcggttga tgctacccgc tctctcagcc gcagccggcg cttgcgagcc
     2041 cgcagccggt cgatggcgcg gttgcgggtg acctggagca gccaggcgac cagcccgcgc
     2101 tgcccgtctt cgggcccggg aactttttcc cacgcggtcc ggaacgtttc caggaccacg
     2161 tcctcggcct catcagggtc ctgcagcatc ccctgggcga tacctaacaa ccagggggac
     2221 gtcagctcca ccaattcggc aagagcccgc tcatcccggg cggcaattcg ggagcgcagg
     2281 tcgtcttccc ggttggacgg cagcaaccgg gccagggccg gtcgaccggc cgacccatga
     2341 gacgatggcg aatctgcggg cactgtcatt ggaacgtctg gagcctgcga tcggttctct
     2401 cgggcactgg tatcacctgg ccattggcgg ctcaccagcc agcggccatg ccgtccttgc
     2461 gtgggtccga tcccgcggcc cagccgcggc cgaggcgcat gaccgcctgg gcaccgccgg
     2521 cggctccggg agggagcagg tcgacctggt gacccagggc ttccagcccc cggcgcacct
     2581 cggcaccgat gggctgctcc aggccgacca gaactccttc cagatggcga aaccgggcgg
     2641 cgtcgatcgc ctcctgaagg tccatgccga attcgagcag gttgagcagt acctgcacct
     2701 gtccctgggg ctggatcgac ccgcccatga cgccgaaggc gagccagggc tcctcgcccg
     2761 ctgctcccgg tgtcgacacg aaggcggggg tgatggtgtg gaggggccgt ttccccggag
     2821 caagggtatt cgcgagcccc ggttccaggg tgaagcccgc cccgcgattc tgcagggcga
     2881 atccggtccc cggcaccacc acgccggagc cgaagttcga ataaatgctg ttgatgagcg
     2941 agaccatgtt gccgtccgag tcggcggcag ccaggtagat ggtctcgctc gcggtcgcgg
     3001 ccgcgcccgg ctccagccgc tcggcggcgc gcagtggatc gaacagggcc cggcggctct
     3061 ggatgaaccc ttcgtccagc aatcgcgtgg gtgggatcgt catcgccgcc ggatcgccga
     3121 cccagcgggc caggtcggcg aaggccagct tcgtggcttc gaccagatga tgcaggtagg
     3181 ccgacgaatt gtggcccatg gccttgaggt cgtagggctc gaggatacgc agcatctcca
     3241 gggcggcgat gccctggccg ttaggcggga gctcccacac ggtgtgcccc cggaaccggg
     3301 ccgagaccgg gtcgacccac tcggactggt ggcgggcgag gtcctccagc gtgaggaacc
     3361 cgcccatgtc gcgtacccgg tccacgatgc gctggcccag ggggccgccg tagaaggctt
     3421 tcgtcccctg gccggcgatg gcctgaaagg tcgtggccag atcgggattc tggtgccact
     3481 cgccggcgcg gggcgctcgt tgcccgtcga tcaggaaggt cgcccgggct cccgggtcca
     3541 agaccaggca ctccacctcg ttggcccact gtgccgcgat gacgggggac acggggaacc
     3601 cccgctcggc cagactaatg gcgggcgcca gcgcctccgc cagcgaaagg gtgccatgcc
     3661 gctcctgcag cgcggcccac cccgccagcg cccccgggac ggtgatcggc tcggcgccgg
     3721 acatgggtac ggtctggtgt ccctgctggc tcagcgcctc gcgggtcatc agcgagccgg
     3781 accgaccgct cgcgttgagc ccgatcagcc gacgttcccg tgccgaccag agaatggcga
     3841 acaggtcgcc cccgatcccg gtcatgtggg gctcgaccag gttgagcacg gccgcggcgg
     3901 tgaccgcggc gtcgatcgca tttcccccac cctgcaatac gcccagcccg gccgaggtgg
     3961 ccagcggctg actggtggcg atgatgccgt tggaggcgta cacggtggat cggccggcca
     4021 tcttggtatc gatcggtcgc ttcgggcagg gtgacaccgg caaagatgga agagcgaggc
     4081 tcgggtcgcc agccgagttg cggtgcgaga gccgggagaa gatgatacgg gcatgacttc
     4141 gccgatctat tacaccgccg aaatggtgcg ggccatgccc gaggatggga agcgctacga
     4201 ggtgattcgc ggagagttgc tggtgacgcc agtccctcgg caggggcatc agcagttggt
     4261 ccatcggttg gggatggcgt tgcaggacta tctcgagcgc gaacgagtcg gtcacctggt
     4321 gatggcgccg gcggatgtct cctggggcag ccgggatacc ctggtccagc ccgatctgtt
     4381 cgtggtgccg cttgaggact cgcacgcggg aaacggggag gaattccaga cgctgttgct
     4441 ggtggtcgaa gtgctgagct cggccactgc tcgcgccgat cggttcacca agcgccgcga
     4501 gtaccagagc cgtggggtcc cggcctactg gatcgtcgat ggtgaggaac ggcgggtgga
     4561 gatctggact ccggaggccg agctgccggc ggtggtattc accgaggtct cctggcagcc
     4621 cgaaggtggc aggaagccgt tcgcgctctc gcttacagag ttgtttcgac cgttgtgaat
     4681 cgcggcctgt cgagctagaa cctcgccagt ggcccggcca ggacctgaca catgaccgcg
     4741 ccgatcaccg ccatcgacaa cccccagatc agcaggagac ggaacagccg tcccgcctcc
     4801 tgcccatccg gcaccgcggc gacgcataag gcgcccaggg tagacagcgg tgagacgtcc
     4861 accagcgacg agcccacgtt gatgctcaag gccaccgcaa acgggtcgcc gccacccagt
     4921 ttctccacca ggccgggcac ggtcggcaga aaggcgggga gcaccacgcc ggaggtactg
     4981 ctccagaccg agattgtccc cgtcaccagc gcgatcacgc cgttcaccga gtcgggtgtc
     5041 gccaggcggg ccagcagcgt ggtgaacaga tccatcccgc cggtggcttc gagcagcgcg
     5101 atcagcacgc tcactccgct caccatcacc aggatccgcc acggcacccg cttcatcgcc
     5161 tgagtctcat ccgcggcccg gagccccacc agcagggcca ccgcggcgaa cgcgctcaag
     5221 cccaggtgca gcttgaagat caggacccca acaatccacg ccagtatcac cagcagcgtt
     5281 acgacctgca cccgagtgaa cgggggcacc gggctcgccg gaccggatcc ttcgggccgt
     5341 tggccctcag gatgactgga cggacgttgg tcctcaggat gactaaacag ccgagggccc
     5401 tcaggctcac catgggtgtg gtcctcgcga tgacggcggc gatgcacgaa ccacacccat
     5461 gccaccagtg ccaccagcag gtgggccacc aggttggcga accacacttt gccctcatgt
     5521 ccgcccagcc ccgcctccgc catcttggtg ttggcgatga cccccacgga gctgaccggc
     5581 gagaggttgc cggcattggc gccgttggcc accatcaggg ccgtcagcag gtgaggcacg
     5641 ccggcccggg cccccaccgc catcgccagc ggcacaatca acgcgacggt ggagatggac
     5701 ccggggccga tcgaggccac caggcacgca atgacgaaga aaagcagcgg gagcaccgtc
     5761 gcgttgcccc gagccagtcg caccgcgcgc ccggccaatc cttccagcgt cccgttggaa
     5821 tcggcgcagg cgaacagcag cgtgactccg gtgagcatca gaaacaacga gaccggaaag
     5881 ccccgtaaca ccgcctcggc gcccagaccg gcccaactcg caatgatcca cgccagcgca
     5941 atcgcgacca cacccacgtt gatccgggtc gtgatcgaca acccgatagc caccaggagg
     6001 gcgagcagtg aggcgagcgc tgcatccatc ggtcgtctgt cgcccgggat ctaaggggtc
     6061 gaaggggtcg aaggggtcga agggggtcga ggaggg
//
LOCUS       DASWKS010000446         7933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2092546, whole genome shotgun sequence.
ACCESSION   DASWKS010000446 DASWKS010000000
VERSION     DASWKS010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7933
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2092546"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VGA78_12585"
     CDS             <1..506
                     /locus_tag="VGA78_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9894757.1"
                     /translation="LGATTILVNNAGLTRDNLLVRLGNEDWDAVLDTNLKGAFHTMRL
                     VAKGMMKRKAGRIINISSVVGLVGNKGQANYAASKAGLIGLTKAVAKEYASRNVLVNC
                     VAPGYIETDMTGALPPEASAALLSAIPLGRWGQPEEIAGAVLFLASDFARYITGQVLV
                     VDGGMTM"
     gene            542..784
                     /locus_tag="VGA78_12590"
     CDS             542..784
                     /locus_tag="VGA78_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013941332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX9894758.1"
                     /translation="MSTNVEERVKDIIVEELGVEREKLTAEASFMEDLGADSLDTVEL
                     VMAFEKEFDIDIPDEEAEKLRTVGDALKYLHEKMGS"
     gene            784..2022
                     /gene="fabF"
                     /locus_tag="VGA78_12595"
     CDS             784..2022
                     /gene="fabF"
                     /locus_tag="VGA78_12595"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX9894759.1"
                     /translation="MQRVVVTGLGLVTPVGNTAEETWASLLAGKPGAAPITKFDPTPF
                     QVRFACEVKGFEPLQYMEKKEARRYDLFAQFALASAHQAITQAGLAGKFPNPERTGVL
                     IGSGIGGMQTFEEQCSEYLTKGPDRVSPFFVPMFIPDIAAGLVSIRYGLKGPNFCTVS
                     ACASSAHAVGESYELIRMGKAECMVTGGAEAAITGLTIAGFQNMKALSTRNDAPEHAS
                     RPFDRDRDGFVLGDGAGIVVLESLEHAQRRGATILGEVIGYGLSADAHHMTQPAPHGE
                     GAQRAMRDCLTDGQIDPKDVDYINAHGTSTELGDIAETQAVKAVFGEDLARRLIFGST
                     KSMTGHLLGAAGGLEFAVCMLVATTGKIPPTINQVIPDPECDLDCAPNVMVERPVRVA
                     LSNSFGFGGHNVTLAVRRFT"
     gene            2204..3391
                     /gene="mqnE"
                     /locus_tag="VGA78_12600"
     CDS             2204..3391
                     /gene="mqnE"
                     /locus_tag="VGA78_12600"
                     /inference="COORDINATES: protein motif:HMM:TIGR03700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HEX9894760.1"
                     /translation="MASRPRPDPIQDRRLDPLRYKVESGARLSADDAILLYQTPDLLG
                     LGWLADQANRRQNGDRVFFSANQHLNPTNVCVLRKTCVFCSFARTPREDGAYTRTLEE
                     VYAEAEQATGAPTTEFHIVGGLHPKLRLSYYTDMIRGLKERHPDVHIKALTAVEIAHL
                     ARIEKISIREVLVALQQAGLTSLPGGGAEVFSTAVRATIAERKLTGEDWVRVHREAHQ
                     LGIPTNCTMLYGHVETAADRVEHLTMLRDLQEETGGFLTYIPLAYHPDHNELGETLGR
                     VGTATTGYEDLRNIAVGRLYLDNVPHVKTHWPMVTPFLSQIALGFGCDDVEGTVVYER
                     VYHEAGARTEMHLPYLALVELIRGAGRRPVERNSLYQTVRDSFENLSSGTSLGNAPVV
                     HAA"
     gene            3381..4229
                     /locus_tag="VGA78_12605"
     CDS             3381..4229
                     /locus_tag="VGA78_12605"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis protein"
                     /protein_id="HEX9894761.1"
                     /translation="MRPDGVGRPTRLGRIPWINGSPVYGAIDRGLVPIPAEVVSGTAS
                     ELNDLLAAGELDLSVVSAVEYARNAAAYHLLPDLAISCDGPVRSVKLFSRGPVEQLDQ
                     STVLVTASSRTSVLLLELLCRHRWSVSPRLATVRAEAMDLELVRGLPHQAVLVIGDAA
                     LLLAAERRYPVEIDLGAEWKAWTGLPFVFAVWAARRQADQDVARRIHEGLLASRQWGL
                     AHLDQLASDAARGTGLPVDLCRHYFDGLDYGLSYRHLAGLTDFFRRLTQDGLVPDGSL
                     SFISAA"
     gene            4279..5337
                     /gene="mqnC"
                     /locus_tag="VGA78_12610"
     CDS             4279..5337
                     /gene="mqnC"
                     /locus_tag="VGA78_12610"
                     /EC_number="1.21.98.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic dehypoxanthinyl futalosine synthase"
                     /protein_id="HEX9894762.1"
                     /translation="MTVDRGSGEFGELVELYQRADLLELGRLADAERWRLHPDPVVTY
                     IIDRNINYTNVCVADCGFCAFARRPKHAEGYVLSYEQIGAKIDECKALGGVQILLQGG
                     HNPYIPFEWYLELMRYIKQHHRIHIHGFSPSEVVFFSERFGMSTAEVIRELRSAGLDS
                     IPGGGGEILVDAVRQRVAPKKAMTDQWLGVQEEAHRQGMKTSVTMMYGMEESNADRVE
                     SLLRIRELQARTGGFTAFICWPLQPEGTPEMSHLKKTDSVSYLRTLALARVVLDNVPN
                     LQSSWVTMGHKVGQIALRFGANDYGSLMMEENVVSAAGTTHRTTLDQIERLITDAGFT
                     PKRRRQDYSIIEPELALA"
     gene            5375..5854
                     /gene="ispF"
                     /locus_tag="VGA78_12615"
     CDS             5375..5854
                     /gene="ispF"
                     /locus_tag="VGA78_12615"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEX9894763.1"
                     /translation="MIRVGVGYDSHPFVEGRPLVLGGQHIPYHRGLAGYSDADAVAHA
                     LTDAILGAAGAGDIGTLFPPGEPRWKDADSLYLLHVAVEHVRERGWAPLQADLSIITE
                     EPRIGPYAQNMRAALARVLGVEPGFVSVKAKTNESMGFIGRGEGLAVIAVATVGEAR"
     gene            5838..6833
                     /locus_tag="VGA78_12620"
     CDS             5838..6833
                     /locus_tag="VGA78_12620"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEX9894764.1"
                     /translation="MGRRADLIEELLATLAAWPPAAIYLIVIAAAVIENFFPPAPADV
                     VITLAAFLSHRGTTSATTVFWVTWVSNVGGAALVYLFARRLGPAFFASRFGRRLISPE
                     AVVAVERNYLRFGIVGLVIARLLPGFRSFTAPFAGIMRLGPVRTLVPIALASAAWYGT
                     LVFLGARLGRNWRLVENILSGLNRTLGFIALLAVLSLVIWLIRRRRRTRTGELQAELT
                     EELKAYPGLGQRALEDPAVAAVAALLLETVSRDESLTPDELEAIERHLRSRWQVSEGG
                     GLPADAAREMLARLEPAARAGLVARLRDLAFGDGALERHEAHVMRRVARLLGMAS"
     gene            6830..7729
                     /gene="xerD"
                     /locus_tag="VGA78_12625"
     CDS             6830..7729
                     /gene="xerD"
                     /locus_tag="VGA78_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEX9894765.1"
                     /translation="MNLAQRFMLEGFRDFLSLEAGHSPTTVESYQRDLARLIRFAELR
                     NVRAPGQVTRQFLRDFVFALKDMGLEASTIRRQISAIHTYYRFLLGEGVVDQDPSDRL
                     ETPRRWRTLPEVLSTKEMEALLASPSVEEPLAWRDRVLLELGYGAGLRVSELCGLGSG
                     DLHLTEGLVRVLGKGSKERLVPIGRQVIGAVSVYLNTTRARLDRGRSEGRLLLNARGQ
                     PLSRVGAWGIVKEHARRAGITKRVTPHTLRHTFATHLLEGGADLRAVQEMLGHADLST
                     TQIYTHVDREYLRQVHRKYHPRG"
BASE COUNT         1322 a         2610 c         2690 g         1311 t
ORIGIN      
        1 cgctcggcgc caccactatc ctggtcaaca acgcgggcct tacccgggac aacctgctgg
       61 tccggctcgg caatgaggac tgggacgccg tgctcgatac caatctcaag ggcgcgttcc
      121 acaccatgcg gctggtggcc aagggaatga tgaaacggaa ggccgggcgc attatcaaca
      181 tcagcagcgt ggtgggcctg gtggggaaca agggccaggc caactatgcc gcgagcaagg
      241 ccgggctgat cggcctcacc aaagcggtgg caaaggagta cgccagccgt aatgtcttgg
      301 tgaattgcgt tgcaccggga tacatcgaga ccgacatgac aggtgccttg cccccggagg
      361 cgagcgccgc gttattatct gccattcccc tcggccgctg gggccagccg gaggagattg
      421 cgggggccgt cctcttcctc gcctccgact tcgcgcgtta catcacgggc caggtgctcg
      481 tggtggatgg cgggatgacg atgtagccgg aacgatcttc ctttaccacg ggaccataca
      541 catgagtacg aacgtcgagg agcgggtcaa agacatcatc gtcgaggaat tgggcgtgga
      601 gcgggagaag ctcaccgccg aggcgagctt catggaggat ctcggcgccg acagcctcga
      661 taccgtcgag ctggtcatgg ccttcgagaa ggaattcgac atcgacattc cggacgagga
      721 agcggagaaa ctgcgcaccg tcggcgacgc gctcaagtat ctccacgaga agatgggatc
      781 gtgatgcagc gggtggtggt caccggcctg gggctggtga cgccggtcgg aaacaccgcg
      841 gaagagacct gggccagtct gctggcgggg aaacccggtg cggcgcccat caccaagttc
      901 gatcccactc cgtttcaggt gcggttcgcc tgtgaggtga agggcttcga gccgctgcag
      961 tacatggaaa agaaggaagc ccggcgctac gacctgttcg cccagttcgc cctcgccagc
     1021 gcccaccagg ccatcaccca ggccggcctc gcaggcaaat tccccaaccc cgagcgcacc
     1081 ggggtcctga tcggcagcgg gatcgggggg atgcagacct tcgaggagca gtgctcggag
     1141 tacctcacca aaggccccga ccgggtgtca ccctttttcg tgccgatgtt catccccgac
     1201 atcgcggcgg ggctggtgtc gatccgatac ggactcaagg gacccaattt ctgcaccgtc
     1261 tcggcctgcg cctcgtcggc ccatgcggtg ggcgaatcgt acgagttgat ccggatggga
     1321 aaagccgagt gcatggtgac cggcggcgcc gaagccgcca tcaccgggct caccatcgcc
     1381 ggtttccaga acatgaaggc gctctccact cggaacgatg ctcccgaaca cgccagccgt
     1441 ccgttcgatc gggaccggga cggcttcgtg ctgggcgacg gagccggcat cgtggtgctg
     1501 gagagcctgg agcacgccca gcgccggggg gcgaccattc tgggcgaagt gatcggctac
     1561 ggcttgtcgg ccgacgccca ccacatgacc cagcccgcgc cccatggtga aggcgcgcag
     1621 cgtgccatgc gcgattgcct gaccgatggc cagatcgatc ccaaggacgt cgattacatc
     1681 aatgcccatg gcacctccac cgagctgggc gacatcgccg agacccaggc ggtcaaggcg
     1741 gtgttcggcg aagacctggc acgccggctg atcttcgggt ccaccaaatc gatgaccggc
     1801 cacctgctgg gcgctgccgg ggggctggaa ttcgccgtct gcatgctggt ggccaccacc
     1861 gggaaaatcc ctccgaccat caatcaggtc atccccgacc ccgagtgcga tctggactgc
     1921 gcccccaacg tcatggtcga gcggcccgtt cgggtggctc tctccaactc cttcgggttc
     1981 gggggacata acgttaccct ggccgtccgg cggtttacct agtcgccggc agtaagtcgc
     2041 tcaccgcccg tcaaccggcc accccgccag gcagccacac catttccgcc ccactccggg
     2101 cccattcggc cgcaagggcg tgagccgccc tgcctggcga cgagtgaccc acgaccagtt
     2161 agattgaggc acagggtaag tgactaactg aaagggagat aggatggcca gccgcccccg
     2221 gcccgacccg attcaggatc gccgtctcga tccgctccgc tacaaggtgg aatcgggcgc
     2281 gcggctctcg gcggacgacg ccatcctgct ttatcagacc cccgacctgc tcgggctggg
     2341 ctggctggcc gaccaggcca accggcgcca gaacggcgac cgggtgttct tctccgccaa
     2401 ccagcacctc aatcccacca acgtctgcgt gctccgcaag acctgcgtct tctgttcgtt
     2461 cgcccggacg ccgcgggagg acggggcgta caccaggacg ctggaggagg tctacgccga
     2521 ggccgagcag gccaccggcg ccccgaccac cgaattccac atcgtgggtg ggctgcatcc
     2581 caagctcagg ctgagttact acaccgacat gattcgcggg ctcaaggaac gtcatccgga
     2641 cgtgcacatc aaggccctga ccgcggtcga gatcgcgcac ctggcccgga tcgagaagat
     2701 ctccatccgc gaggtgctgg tcgcgttgca gcaggccggc ctcaccagcc tccccggcgg
     2761 cggcgccgaa gtgtttagca ccgcggtccg ggccacgatc gcggagcgca agctcaccgg
     2821 cgaagactgg gtccgggtcc atcgcgaagc gcaccagctc ggcattccga ccaattgcac
     2881 catgctctac gggcacgtcg aaaccgcggc cgaccgggtc gagcacctca ccatgctgcg
     2941 ggaccttcag gaagaaaccg gcgggtttct cacctacatc ccgctggcct atcatccgga
     3001 ccacaatgag ctgggcgaaa ccctgggccg ggtcggaacc gccacgacgg gctacgaaga
     3061 cctgcgcaac atcgccgtcg gccggctgta cctggacaac gtgccccacg tgaagaccca
     3121 ctggccgatg gtgacgccgt ttctgtcgca gatcgcgctc gggttcgggt gtgacgatgt
     3181 ggaaggcacc gtggtctacg agcgggtata ccacgaggcc ggcgcccgca ccgagatgca
     3241 cctcccctac ctggcactgg tggagctgat ccgaggggcg ggccggcgac cggtggagcg
     3301 gaacagcctg taccagacgg tacgggatag cttcgaaaac ctttcgagtg gcacgtcgct
     3361 gggcaacgcg ccggtggtac atgcggcctg atggggtggg ccggcccacc cgcctggggc
     3421 ggatcccctg gatcaacggt tcgccggtat acggagcgat cgatcggggg ctggttccga
     3481 ttccggccga ggtggtcagc gggaccgcct ccgagctcaa cgatctgctc gctgccggcg
     3541 agctcgacct gagcgtggtc tcggcggtcg agtacgcccg gaacgccgct gcctatcact
     3601 tgttgcccga tctcgcgatt tcctgcgatg gcccggtgcg gagcgtcaag ctcttcagcc
     3661 ggggaccggt cgagcagctg gaccagtcca ccgtgctggt gaccgcgtcc tcccgcacct
     3721 cggtgttgct gctggaactg ctctgccggc atcgctggtc ggtatcgccc cgcctggcta
     3781 ccgtccgggc cgaggccatg gatctggagc tggtgcgggg actgccgcac caggcggtcc
     3841 tggtcatcgg cgacgcggcg ctcctgttgg ccgcggaacg acgctatccg gtcgagatcg
     3901 atctcggcgc cgaatggaag gcatggaccg gcttgccctt cgtgttcgcc gtctgggccg
     3961 ctcggcgcca ggcggatcag gacgtggccc ggcggattca cgagggactg ctcgcgtccc
     4021 gccagtgggg cctggcccat ctggaccagc tggcctcgga tgccgcccgc gggaccgggc
     4081 tgccggtgga tctctgccgg cactatttcg acggactcga ctacgggttg tcgtaccggc
     4141 acctggcggg attgaccgac ttcttccggc ggctgacaca ggatgggctg gtgccggatg
     4201 gcagtctgtc gttcatctcc gccgcatgac gacgaggcga ctggcgaccc gtgacccgcg
     4261 acgaatccga ggtgacgcat gacggtcgat agaggctccg gcgagtttgg cgagctggtc
     4321 gagctctacc aacgcgccga tctgctggag ctcggccggc tggcggacgc cgagcggtgg
     4381 cggctccatc ccgatccggt cgtcacctac atcatcgacc gcaacatcaa ttacaccaac
     4441 gtctgcgtgg cggactgcgg cttctgcgcc ttcgcccgcc ggcccaagca cgcggaaggg
     4501 tacgtcctct cctacgagca gatcggcgcc aagatcgacg aatgtaaggc gctgggcggc
     4561 gtgcagatcc tgctgcaggg gggccacaac ccctacatcc ccttcgagtg gtatctggag
     4621 ctgatgcgct acatcaagca gcaccatcgg atccacatcc acggcttttc gccctcggag
     4681 gtggtgtttt tctccgagcg cttcgggatg agcacggccg aggtcatccg ggagctgcgg
     4741 agcgcgggac tcgattccat tcccggcggc gggggcgaga tcctggtcga cgcggtgcgg
     4801 cagcgggtgg cgcccaagaa ggcgatgacc gaccagtggc tcggggtcca ggaagaggcc
     4861 caccgccagg gcatgaagac ctcggtcacg atgatgtacg gcatggagga gagcaacgcc
     4921 gaccgggtcg aaagtctgct gcggatccgc gagctgcagg cccggaccgg cggcttcacg
     4981 gcgttcatct gctggccgct ccagccggaa ggaacgcccg agatgtccca cctgaagaag
     5041 accgattcgg tcagctacct ccggaccctg gcgctggccc gcgtggtgct cgacaacgtg
     5101 ccgaacctgc agtcgagctg ggtcaccatg ggccacaagg tggggcaaat cgcgcttcgg
     5161 ttcggcgcca acgactatgg cagcctgatg atggaggaga acgtcgtctc ggccgccggc
     5221 accacccatc ggaccacgct cgaccagatc gagcggttga tcaccgatgc cgggttcacc
     5281 cccaagcgcc ggcggcagga ctactcgatc atcgaacccg agcttgcact ggcatgagga
     5341 cggaccgacg gcccgacggc ccgacggccc gtccatgatc agagtgggcg tgggctacga
     5401 ttcccacccg ttcgtcgagg gccggcctct ggtcctcggc ggccagcaca ttccctacca
     5461 tcggggactg gccggctatt ccgacgccga tgcggtggcc cacgcgctca ccgacgccat
     5521 tctcggcgcg gccggcgccg gggacatcgg taccctgttc ccgcccggcg agccgcgctg
     5581 gaaggacgcc gattcactct atctgctgca tgtggcggtg gaacacgtgc gcgagcgagg
     5641 ctgggctcca ttgcaggcgg atctctccat catcaccgag gaaccccgga tcgggcccta
     5701 tgcccagaac atgcgggccg cgctggcgcg ggtgctgggg gtggaaccgg gcttcgtgag
     5761 cgtcaaagcc aagaccaacg agagcatggg attcatcgga cggggcgagg gcctggccgt
     5821 catcgccgtg gccacggttg gggaggcgcg ctgatctgat cgaggagctg ctcgccaccc
     5881 tagcggcctg gccccccgcc gccatctatc tgatcgtcat cgccgcggcc gtcattgaga
     5941 acttctttcc gccggccccg gcggacgtgg tcatcaccct ggcggcgttc ctgtcgcatc
     6001 gcggcactac tagcgcgacc accgtgttct gggtcacgtg ggtctccaat gtgggcggcg
     6061 cagcgctagt gtacctgttt gcccgccgcc tgggccccgc cttcttcgcc tcccggttcg
     6121 gccggcggct gatctccccc gaagctgtgg tcgcggtaga gcggaactac ctccgcttcg
     6181 gcatcgtcgg attggtcatc gcgcgactgc tgccgggctt ccgctccttt accgcccctt
     6241 tcgccggcat catgcggctg gggccggtgc gcaccctggt tcccatcgcg ctggcctcgg
     6301 cggcgtggta cggaactctg gtcttcctgg gcgcccggct gggtcggaac tggcgcctgg
     6361 tcgagaacat cttgtcgggc ctcaaccgga cgctgggatt catcgcgctg ctggccgtgc
     6421 tgagcctggt gatctggctc atccggcgac gccgccggac tcgcaccggc gagttgcagg
     6481 ccgaactcac cgaggagctc aaggcgtacc ccggcctggg gcagcgggcc ctcgaggatc
     6541 cggccgtggc cgcggtggcg gcactgctgc tcgagaccgt cagccgcgac gagtcgctca
     6601 cgccggacga gctggaggcc atcgagcgcc atctgcgatc tcgctggcag gtctcggagg
     6661 gaggggggct gccggcggac gcggcgcgtg agatgctcgc ccggctcgag cccgccgccc
     6721 gggccgggct ggtggcccgg ctgcgggacc tggccttcgg cgatggcgcg ctcgagcggc
     6781 acgaagccca cgtgatgcgg cgggtggcgc ggctgttagg tatggcctcg tgaacctggc
     6841 acagcggttc atgctcgaag gctttcgcga ctttctgtcg ctcgaggccg gccacagccc
     6901 caccaccgtc gagagctatc agcgggacct ggcccggctg attcgcttcg ccgagctgag
     6961 gaacgtccgc gcgccggggc aggtcacccg ccagttcctg cgcgatttcg tcttcgccct
     7021 caaggacatg ggactggagg cgtccaccat ccggcggcag atctcggcga tccataccta
     7081 ctaccgcttc ctgctcggcg aaggcgtcgt cgaccaggat cccagcgacc ggctggagac
     7141 gccccgtcgc tggcgcacct tgcccgaggt gctgtcgacc aaggaaatgg aggcgttgct
     7201 ggcgtcgccc tcggtggaag agccgctcgc ctggcgggac cgggtgctgc tggagctggg
     7261 ctatggcgcc gggctccggg tctcggaact gtgcggcctc gggtcggggg acctgcatct
     7321 gacggaagga ctggtgcggg tgctcggcaa gggatccaag gaacggctgg tcccgatcgg
     7381 ccggcaggtg attggcgcgg tgtcggtcta tctcaacacg acccgggccc ggctggaccg
     7441 gggacgcagc gagggaaggc tgttgctcaa cgcccgggga cagccgctat cgcgggtggg
     7501 ggcgtggggg atcgtgaagg agcacgcccg ccgggcgggg atcaccaagc gggtcacgcc
     7561 ccacacgctg cgtcacacct tcgccaccca tctgctcgaa ggcggcgccg acctccgagc
     7621 cgtccaggag atgctggggc acgccgacct gtcgaccaca cagatctaca ctcacgtcga
     7681 tcgggagtac ctccggcagg tccaccggaa gtaccatccg cgggggtaat ctctggtcga
     7741 aggcggtcga aggggtcgaa ggagtcgaaa gagtcgaaga agtcgaagaa gtcgaagggt
     7801 ggggtggcgg ggaagagggg agtaggttac gtttcaatta gtaacgtgga ggttggagtg
     7861 atgcgctcat actgggtcaa gatcgttttc ggggctctgg ccatttttct ggtcggctac
     7921 ctcggcgtga cgg
//
LOCUS       DASWKS010000447         5415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1332464, whole genome shotgun sequence.
ACCESSION   DASWKS010000447 DASWKS010000000
VERSION     DASWKS010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332464"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..939
                     /locus_tag="VGA78_12630"
     CDS             25..939
                     /locus_tag="VGA78_12630"
                     /inference="COORDINATES: protein motif:HMM:NF022818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:208..210,aa:Sec)
                     /transl_table=11
                     /product="DUF3179 domain-containing (seleno)protein"
                     /protein_id="HEX9894766.1"
                     /translation="MFQPLEGVSRVEVARAGFVRPGDMVMGIVSNGAAMAYPVNQLAY
                     HHVVNDTVGGVPIAATYUTLCHTGVVWQVALEGRTLRFRLAGINNQNFLMQDEETGSW
                     WQQITGMAIAGPLKGHRLTRLLHDEVAFRIWAGEHPASGVLVPDADSAWIEFSDNWEE
                     NTARYPVPTRARLRDSLPPRTVMVGLDLEGDSRAWTMEALERQQVIIDRVGGRSVVVI
                     LGDDGKSVRAFAPEVDGRFIELFVLPGSAPLRFRDGTTGSTWDFRGVAIDGPLAGKQL
                     QPLGVIKDYWFNWKHYHPAGRLYNLGQQ"
     gene            999..2807
                     /locus_tag="VGA78_12635"
     CDS             999..2807
                     /locus_tag="VGA78_12635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9894767.1"
                     /translation="MRTETFCTLALLSTGTRLPAQIDTTIGLIERNVAVPVRDGVVLR
                     ADLWRPAGAGRFPTLVYRTPYNKAPVFTTYSLFRKAVERGYAVVAQDVRGRYASDGEY
                     LAYQQEGKDGHDTIEWAAAQAWSDGRVGSFGLSYPGAVQWLAAIERPPHLLAMVPAMT
                     FASPMHFWYTGGVWDNSWVSWVWQNIAPDIRQRRNLPGPRTGREAREAWPAQGRAMQN
                     FLPLGKMPAFVGVTDWYYEWMKHPPFDPWWDWAELTNKYDRVTAAVLNLSGWHDEAYG
                     PAGATTNFAGLVKARGGDGLSAQTHLVVGPWNHGIGPIARSRIGERAMGTAAALDYDE
                     LVLRWMDRWVKGLDNGVDREPPVRVYVMGAGQWRTGDRWPLDGGEPTAFYLGGQAGGR
                     AAGRTMGLLLASPSTSPASSSFISDPANPVRDPFAEEAGPHDYRVLGDRDDVLLFETE
                     PLVEDLESVGPIEAEIYVSSDKPDTDLWVKLLDVSPDGTAFNLMSPGLDVIRASYREK
                     QPTRSLLKPGRVYQLRLESLLTANRFLRGHRIRIAVMASFAPHMSRNLHSGLLEMVSD
                     RGERARITVHHDRRYPSRIVLPALTDGPTDRRTDGR"
     gene            complement(2812..3675)
                     /locus_tag="VGA78_12640"
     CDS             complement(2812..3675)
                     /locus_tag="VGA78_12640"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX9894768.1"
                     /translation="MGIQRVEFYTTKYGPEMLVDAAWVREMPTFLLPGPHALTFYDIL
                     FVTSGRGWFWLDTYRHPVTPAQVFFTTPGQVRRWEVEDLDGLCLFFPAAFLEEFFNDS
                     LFLHRLPYFHVPEARGALSLGQPAANALRRHLLAMRRELRVLRPDSVHLLRARLYEIL
                     ITLSRQYSSQRGGASQLVPHGMALRFRELVERDASRHHGVAWYARELGVTPGHLNVLT
                     RRHLGRGAKEVIAERLALQARRMLLYSEKSAAQVGFGLGFQDPSYFTRFFRRETGRSP
                     SAFRREAGGTA"
     gene            3768..4859
                     /locus_tag="VGA78_12645"
     CDS             3768..4859
                     /locus_tag="VGA78_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894769.1"
                     /translation="MPHPYFALVALAVVVPQERSVPLDSAWELSGEATRIENYRGTRA
                     IRIRTGQAVRRDVSLGDGTIEFDVAMALQRSFVYLRFRMVSESEHEEIYFRPHKTSLP
                     DAVQYSPVWNGDSNWQLYHGPGSTAAISFAREEWIRVRLVLSGRRAALFVGARPTPEM
                     VIALGRSPVAGYLSFGSFVPGAASGEPAAAFTNLVVKPGQISHDFGPEAPAPPVPPGL
                     VSRWQLSPAFVVPRGIVATAPDSLLAGRSRWPAFTVEPTGVLVIGRHLRRPAPQAATV
                     ARLVLQSSTARLQQLKLGYSDYVTVIVNGKPLFAGDAHYSFDEPRQEGLIGLYQSIVW
                     LPLLAGENEVLLVVADGFGGWGLMGQLVD"
BASE COUNT          922 a         1715 c         1857 g          921 t
ORIGIN      
        1 gcgcgccaga atcacttcga gtggatgttc cagccactcg agggcgtgtc acgggtcgag
       61 gtagcacgag ccggcttcgt gagaccgggc gacatggtga tgggaatcgt cagcaatggc
      121 gccgccatgg cctacccggt gaaccagctg gcctaccacc acgtcgtgaa cgacacggtg
      181 ggaggcgtgc cgatcgcggc cacctattga acgctgtgcc acaccggggt ggtgtggcag
      241 gtggccctgg aagggcgcac attgcggttc cggctggcag ggatcaacaa tcagaacttc
      301 ctgatgcagg acgaggagac cggcagctgg tggcagcaga tcaccgggat ggccatcgcc
      361 ggccccctca agggccaccg actcacccgg ctcctgcatg acgaggtggc gttccggatc
      421 tgggccggcg agcatcccgc gagcggggtc ctggtgcccg acgccgattc ggcgtggatc
      481 gagttctcgg acaactggga agagaatacc gcgcgatacc cggtgcccac ccgggcccgg
      541 ctccgcgact ccctgccgcc tcgaaccgtg atggtgggtc tcgacctcga gggcgactcg
      601 cgggcgtgga cgatggaggc gctggagcgg cagcaggtga tcatcgatcg ggtcggaggc
      661 cggagtgtcg tcgtgatcct gggcgacgac ggaaagtcgg tgcgggcatt cgcccccgag
      721 gtcgatggcc ggttcatcga gctcttcgtg ctgccgggat cggcccccct ccggttcagg
      781 gacggcacca ccggcagtac ctgggacttt cggggagtcg cgatcgacgg accgttggcg
      841 ggaaagcagc tccagcccct gggcgtgatc aaggattact ggttcaactg gaagcactat
      901 catccggccg gacggctcta taatctcggc cagcaataac agtactgagt actgagggcg
      961 gagtactgag ggcggagtta atcctctgag catcttgcat gcgaactgaa acgttctgca
     1021 cccttgcgct cctttccacc gggactcgac tcccggcgca gatcgatacc acgatcggcc
     1081 tcatcgagcg caacgtcgcg gtaccggtgc gggatggcgt ggtcctccgg gccgacctgt
     1141 ggcggccggc cggtgccgga cgattcccca cgttggtcta ccggaccccg tacaacaagg
     1201 caccggtctt caccacctac tccttgtttc gcaaggcggt cgagcgaggc tacgcggtgg
     1261 tggcgcagga tgtccgtggc cgttacgcct cggatggcga gtacctggcc tatcagcagg
     1321 aggggaagga cgggcacgac accatcgagt gggcggcggc ccaggcctgg tcggatggac
     1381 gggtcggcag cttcggcctc tcttatcccg gcgccgtcca gtggctggcc gcgatcgagc
     1441 gacccccgca cctgctggcg atggtgccgg cgatgacctt cgcctcgccc atgcacttct
     1501 ggtataccgg tggggtgtgg gacaactcct gggtcagctg ggtctggcag aacatcgcgc
     1561 ccgatatccg gcagcgtcgt aacctgccgg gcccccggac cggtcgcgag gctcgcgagg
     1621 catggcccgc ccagggacgg gccatgcaga actttctccc gctcggcaag atgccggcct
     1681 tcgttggcgt gaccgactgg tactacgaat ggatgaagca cccgcccttc gatccctggt
     1741 gggactgggc cgagctgacc aacaagtacg atcgggtcac ggcggccgtg ctcaacctga
     1801 gcggatggca tgacgaggcc tacggcccgg ccggcgcgac caccaatttc gccgggttgg
     1861 tgaaggcgcg aggcggcgac ggcctttcgg cccaaactca tctggtggta ggtccgtgga
     1921 accatggcat cgggccgatc gcacgctccc gcatcggcga gcgtgcgatg ggaacggcgg
     1981 cggcgctgga ttacgacgag ctggtgctgc gctggatgga ccggtgggtg aagggcctcg
     2041 acaatggagt cgatcgcgag ccgccggtac gggtctatgt catgggcgcg ggccagtggc
     2101 ggaccggcga tcgctggccg ctcgatggtg gggagcccac ggcattctat ctgggcgggc
     2161 aggcgggcgg ccgggcggct gggcgcacga tgggattgct gctggcttca ccctctactt
     2221 ccccggcatc ttcgtcgttc atttccgatc cggccaatcc ggtgcgcgat ccgtttgcgg
     2281 aggaggccgg tccgcacgac taccgggtgt tgggcgaccg ggatgatgtg ctgctcttcg
     2341 agaccgaacc actggtcgaa gatctggagt cggtgggacc gatcgaggcc gagatctacg
     2401 tctccagcga caagccggac actgatctct gggtgaagct gctggacgtg tcgccggatg
     2461 gcacggcctt caacctgatg agcccgggcc tggacgtcat tcgggccagc taccgcgaga
     2521 agcaacccac ccggagcctg ctgaagccgg ggcgggtcta ccagcttcgg ctcgagtcgc
     2581 ttctcaccgc aaaccgcttc ttgcggggcc accggatccg gatcgccgtg atggcctcct
     2641 ttgcccccca catgtcgcgg aacctgcata gtggcctcct ggaaatggtg tcggaccggg
     2701 gggagcgggc gcggatcacc gtgcaccacg atcggcggta tccgtcgaga atcgtgcttc
     2761 cggcactgac agacggaccg acagaccgac ggaccgacgg ccggtaaacg cctacgcggt
     2821 tccgcccgcc tcccgcctga aggcgctggg tgagcggccg gtttcgcgcc ggaagaaccg
     2881 cgtgaagtag ctcggatctt gaaatcccaa cccgaagccc acctgggcag ccgacttctc
     2941 cgaatacagc agcatccgcc gggcctggag cgccagccgc tcggcgatga cctccttggc
     3001 tccccggccg aggtgccggc gggtgagcac gttgagatgc ccgggagtca ctcccaattc
     3061 ccgagcatac caggctaccc cgtggtgccg ggaggcatct cgctcgacca gttcccggaa
     3121 ccgcaatgcc atcccgtgcg ggaccaactg tgatgcgccg cctcgctgag aggagtactg
     3181 gcgcgacagc gtgatcagaa tctcatacag tcgagcccga agcaggtgca cgctgtccgg
     3241 acgcagcacc cgaagttctc ttcgcatggc cagcagatgg cggcggaggg cgttggccgc
     3301 cggctggccc agggacagcg ccccccgcgc ttccggcaca tggaagtagg gcagccggtg
     3361 cagaaacagc gaatcgttga agaactcctc cagaaacgct gctggaaaga acaggcacag
     3421 cccgtcgagg tcctcgacct cccaccgccg aacctggccg ggtgtagtga agaacacctg
     3481 ggccggggtg accgggtgac ggtatgtgtc gagccagaac caaccgcgtc ccgaggtgac
     3541 gaagaggatg tcgtagaagg tgagcgcgtg gggaccgggc agcaggaagg tcggcatctc
     3601 ccgcacccag gcggcgtcga ccagcatttc gggcccgtat ttcgtggtgt agaactcgac
     3661 ccgctggatg cccatcgttg aaaagtacca gaaggccgtc gttttgcgct ggctccggat
     3721 cccgggtttc gacgtacggt cagagaaccg gctttctggg agtcacggtg ccccatccat
     3781 acttcgccct ggtggccctg gcggttgtcg tgccccagga gagatccgtt cccctcgaca
     3841 gcgcgtggga actgtcaggc gaggcgaccc ggatcgagaa ctaccgcggg acgcgagcca
     3901 tacggattcg aaccggacag gcggtgcggc gggacgtgtc gctgggagat gggaccatcg
     3961 aattcgacgt ggcgatggcg ctgcagcgct ccttcgtgta cctgcgcttc cggatggtga
     4021 gcgagtcgga gcacgaggag atctacttcc ggcctcacaa gacttctctc cccgacgcgg
     4081 tccagtactc gccggtctgg aacggggata gcaactggca gctgtatcac ggcccaggct
     4141 ccacggcagc catctccttc gcccgtgagg aatggatccg ggtgcggctg gtgctcagcg
     4201 gacgccgcgc cgcgctgttc gtgggggcgc ggcccactcc tgagatggtg atcgccctgg
     4261 gccggtcgcc ggtcgccggc tacctctcgt ttggctcctt cgtcccgggg gcagcgtcgg
     4321 gggagccggc ggcggcattc acgaacctgg tcgtcaagcc gggacagatc tctcacgact
     4381 ttggcccgga agcccccgcg ccgccggtcc ccccgggtct ggtgagccgg tggcaactgt
     4441 cgcctgcgtt cgtggtccct cgtgggatcg tggccacggc tccggacagc ctgctggccg
     4501 gcaggtcgcg ctggcctgcg tttacggtgg agcccaccgg tgtgctggtc atcggccgcc
     4561 acctgcggcg gccggcacct caggcggcga cggtggcgcg tctggtgctg caatcaagca
     4621 ccgctcggct gcagcagctc aaactgggct acagtgatta tgtaaccgtg atcgtgaacg
     4681 gcaagccgct gttcgcggga gacgcgcact acagtttcga tgagcccagg caggaaggtc
     4741 tgatcgggct gtatcagtcg attgtctggc taccgctgct ggcgggggag aacgaagttc
     4801 tgctggtcgt tgcggacggc ttcggtggct gggggctgat ggggcagcta gtggactgac
     4861 aggcgggcgg gcggactggc ggacagtccc tcagtcctca acgcctggct ctcctcgcca
     4921 ctgcctcgta caagccccag gtcaatcggc tcgcgtgatc acggtggatt tcgatctcgg
     4981 tgaaatcgct ccgggtcaga tagcccagat ctccggccac acgaaggtag tatgaaagct
     5041 ccgagagaga gcccacggac aagtcaagga aacgtctgaa ctcccgggac ccgcggcgcg
     5101 ccgatccctc gcagatgttc gctgccgctg aaagagcggc acgccgagcc tggccggtaa
     5161 ggccatacct tgcttcccga ggccagtgca cggtcaaacg gaagatttcg aggaccagtt
     5221 gatggcacgc gccccaggcc tggaatcgtt cgtagggctt ggcatcggag gcggattcgg
     5281 tggtcatggt ataacgtgga caactgaggg cccattgcgg taaccaaaag gaccccaaga
     5341 gtatcgtttc ggcccgcccg cccgcccgcc cgcccgcccg cccgcctgtc agaagtcagc
     5401 ccgtccgctt ctcaa
//
LOCUS       DASWKS010000448        10745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3542688, whole genome shotgun sequence.
ACCESSION   DASWKS010000448 DASWKS010000000
VERSION     DASWKS010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10745
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3542688"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VGA78_12650"
     CDS             complement(<1..362)
                     /locus_tag="VGA78_12650"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HEX9894770.1"
                     /translation="MTDAQRVAERVVEGMLARDEFSRWLGLEVVALGVGACTCRLTVR
                     DDMVNGLGVVHGGVAYSLADSALAFACNGGGQVTVSIENGIRYPAPVRLGDVLTAEVV
                     SAGGSRRLEYYNGRVTRQ"
     gene            complement(359..1546)
                     /locus_tag="VGA78_12655"
     CDS             complement(359..1546)
                     /locus_tag="VGA78_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX9894771.1"
                     /translation="MGLSASTAIGILGSGAMGSGIAQVAAAAGHPVVLGDLSEAALAR
                     ALAGIKKALDREVEKARRTPAEVDAIMGRIRTGPTDGNYRLYERCGLVVEAIVEDLSA
                     KQQAFTTLESSTGPDAVLASNTSSLSITAIASACRRPERVLGMHFFNPAPVLPLVELV
                     GGYATDPVLLQEIRSLVDRWGKTPVIAADTPGFIVNRVARPFYGEALRLVEEGVAQPV
                     TIDWAMRELGGFRMGPFELMDLIGNDINYAVTRSVFEAFAYDPRYRPSLLQRRLVDAR
                     LFGRKSGRGWYDYRDGASPVAPPVTDEALGHRIVDRIVAMLINEAADAVFLRIASAAD
                     IDLAMTKGVNYPRGLLLWADQIGVAVVFERLVALQDEYGEDRYRPSALLRRMAREGRS
                     FYS"
     gene            complement(1547..2338)
                     /locus_tag="VGA78_12660"
     CDS             complement(1547..2338)
                     /locus_tag="VGA78_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017693479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9894772.1"
                     /translation="MPNQFILTETAEGVLTMTLNRPEVLNSCNGAMAAELQAAFAAAA
                     EDPGVRAVILTGAGRAFCAGQDLDEARPASGETPKDFAVHVRTVYNPIVRAIRGLPKP
                     VIAAVNGVAAGAGANLALACDFVLASGQASFIQSFTRIGLVPDTGGTWFLPRLVGLAR
                     ATALTMLAEKVTAEQALSFGMIYRVVEPDRLREESLELARSLAAHATLGLGLTKRLLN
                     ASLVNDLDTQLELEAELQGTAGRSEDYTEGVSAFLEKRAPTFKGR"
     gene            2363..3580
                     /gene="pcaF"
                     /locus_tag="VGA78_12665"
     CDS             2363..3580
                     /gene="pcaF"
                     /locus_tag="VGA78_12665"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: protein motif:HMM:NF006551.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEX9894773.1"
                     /translation="MRDAFIADGLRTPIGALGGSLSSVRADDLAAHVLRGLVARHSAL
                     DPARIADVILGCANQAGEDNRNVARMALLLAGIPHLVPGETVNRLCASGLSAAASAAR
                     SVAVGQGDIYLAGGVEQMTRAPYVLSKTSQPFGRDAQLFDTSLGWRFVNPVMRERYGV
                     DSMGQTAENVAELLSIGREDQDRFALRSQQKAAAARAAGRFVREILPVETPPPGRGKP
                     SGLMDQDEFIRPDTTLEVLGKLKPAFRSGGKGTVTAGNSSGLNDGACALLVVSSTGLL
                     ALGVQPLARIVASVAVGVEPRLMGLGPVPATRAVLERAQLTLDDLEVIELNEAFASQS
                     LGCLRQLGMTDDDPRVNPNGGAIALGHPLGMSGARLLLTAAHELAERRGRYALCTMCI
                     GVGQGMAMILERM"
     gene            3620..4216
                     /locus_tag="VGA78_12670"
     CDS             3620..4216
                     /locus_tag="VGA78_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase hexapeptide repeat family protein"
                     /protein_id="HEX9894774.1"
                     /translation="MIYQFDGITPVVHPSAFVHPQAAVTGNVVIGPDCYIGPGAALRG
                     DWGGIILEDGCNVQENCTIHMFPGVTVVLEAGAHLGHGAVVHGARIGRNALVGMNAVV
                     MDRAVVGPGSIVGALSFVPEGMEIPERKVAVGNPARIVKDVSEEMLEWKTRGTALYQA
                     LPAQLHQRLVPVEPLRDIPADRPVQPGGYRPWKTTQDS"
     gene            4233..6269
                     /gene="paaZ"
                     /locus_tag="VGA78_12675"
     CDS             4233..6269
                     /gene="paaZ"
                     /locus_tag="VGA78_12675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HEX9894775.1"
                     /translation="MRLKNYVQDRWVEGTGPAATLYHAVTGEPVAEATTGGIDFKAAL
                     EYARRTGGPALRRMTFHERARMLKAMAQYLMGRKDELYTVSAVTGATKTDSWVDIEGG
                     IGTFFTYASKGRRELPNETFYIDGELEPLSKGGTFIGRHICVPLEGVAVHINAFNFPC
                     WGMLEKLAPTFLAGVPAIVKPATATSFLTNAMVQAMLDADLLPAGALQLLCGGVGDLF
                     EHLTGQDAVTFTGSAATGRKLKCHPQVITESVRFNMEADSLNFCLLGPESEPGTEEFD
                     LFVKEVARETTLKAGQRCTAIRRAIVPEKLVQPVIAALSKRLAGATLGNPGADGVRMG
                     PLASRDQVREVRKSVESLKAGAELVYGDLDNFSVVGADRDKGAFFPATLLYCRDPFGR
                     SEPHDIEAFGPVSTVMGYATLNDAVELVKRGRGSLCGSVFTSDDGVAREVVLGTAAYH
                     GRIMLLNRHSAKESTGHGSPMPHLVHGGPGRAGGGEEMGGIRGVLHYMQRTALQGHPT
                     TLSRVMNVWMKGAEMLRDRIHPFRKTWDELRIGETWITPRRTVTEADVVRFAGISGDF
                     FYAHMDDIAAKESLFGNRVAHGYFVLSAAAGLFVDPAPGPVLANYGLEALRFTKPVYP
                     GDTIQARITVKQKTAKEPVEGQPPQGVVAWDVEVTNQEGETVAIYTILTLVRRS"
     gene            complement(6284..8269)
                     /locus_tag="VGA78_12680"
     CDS             complement(6284..8269)
                     /locus_tag="VGA78_12680"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894776.1"
                     /translation="MASTRPSLQSAAAVVDVRKRLDKALGGNFTVGELVGRGGFAEVF
                     AVRDNRLKRDLAVKVLSPELVVNQPMLHRFRREAEAVAALRHAGIVPIYDIGESGGIA
                     YIMMPLIKGETLKKRLEREGRLPIPEVRRIIREIANALSVAHEAGLVHRDIKPENVML
                     EGPKQQVLVMDFGIAKALDPEQTGMTSSGLIVGTPHFMSPEQASGEPVDGRSDQYSLS
                     VLGYRMVTGAHPFDGETTRALLYKQVFETPARARERFPEVPQSLSDALHRGMAKDSKD
                     RYTTIDEFAAACLQEDTTERKASAKAAEKDKAKDRAKEKAQAKTTARVIAGKPAASRV
                     TKPGKNRRLGLVAVAGIALVAVIAVAVSRGSSSGARQAAPPASDTAPPPTAAPPPPPP
                     SEQTKAPAPQRPAPRDRATRSTEPTPSTPVEPSRPSLIREDTAPKTVPAPETCADAVR
                     ASAWPVALTQCQAEADQGNPAAMVALAGLHERGQGTVADLAAAAEWYRKASTAGSADA
                     AFRLGVMYEEGRGVTQSITDAAGFYRQAAGRGVPAAMRAIARMYVTGQGVQKNEREAV
                     SWYRRAVIKNDIPSFVRLAELYTQGRGVSRNLAEAARLYQRGAEAGDAESQYQLAMAY
                     FIGQGVAQSDTTGMQWLRRAAAKGHEPAQQELAKRGQ"
     gene            complement(8430..9296)
                     /locus_tag="VGA78_12685"
     CDS             complement(8430..9296)
                     /locus_tag="VGA78_12685"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9894777.1"
                     /translation="MKPPLLELGGTGPVLHLALANGFPPATYEPLFVRLRDRFRIVCL
                     SPRALWVGGGPPPAEAGSWESLADDLLAGWESHRLSPLVALGHSFGAVASLLAAVRSP
                     ASVAALIMLDPTIMPRELMSGYAAELAAGRSPRLRLVDTALKRRSRFGSLQEAFEYWR
                     GKDLFRDWPDQALERYASAMLRPNPAGGWTLVWPPEWEAWYYRSFYPHTWDIVPQLDP
                     AIPALVVGGEASDTFVTRSSDELRKLMPGATFATIPGAGHLFPQSHPAETRAVIEPWL
                     ASIVRQPRLSVS"
     gene            complement(9293..9763)
                     /locus_tag="VGA78_12690"
     CDS             complement(9293..9763)
                     /locus_tag="VGA78_12690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894778.1"
                     /translation="MLPEDVTADLLNPSLQRFFLDHLHRAKTAVLLRHGGCSCDLAGR
                     RNPDGAEDERSLRTRYRQDRVPRAQVIEAMERHRTRPRGPEVPAGHWSGALAGLVAEH
                     ARNAGSALYYLDFTPELERMPPWPPSGPERVGTARVLAHPGSWLPEGAPVVVLP"
     gene            complement(9827..10210)
                     /locus_tag="VGA78_12695"
     CDS             complement(9827..10210)
                     /locus_tag="VGA78_12695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES family protein"
                     /protein_id="HEX9894779.1"
                     /translation="MSVDQSFSGKLHVVGDRVLIVPEEGEDRTRVGLYLPATAVDSQQ
                     VQSGRIVATGPGDPVPDPTAFEDEPWKVTRQHVRHRPMQARAGDHAIFFRKASVEITF
                     EGERYLVVPEAAILVLVRDPDEDRV"
     gene            complement(10207..>10745)
                     /locus_tag="VGA78_12700"
     CDS             complement(10207..>10745)
                     /locus_tag="VGA78_12700"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX9894780.1"
                     /translation="NRPQPGAPAPGRPFFTRDEPMIDAMRVKLGKEIEALTYELNFTL
                     PRAIASAVEMGDLRENSEYKAALERQQFVQARLGQLHQRMAQLGELSSAEAPTGRVGL
                     GSEVVVLDLDTNGTDTYTLVLAEMMDIDAGHISLASPLGRALKDRQVGDEVGLRLPHG
                     ARRLRVVELRTVYDQAGG"
BASE COUNT         1736 a         3623 c         3672 g         1714 t
ORIGIN      
        1 tcctgcctgg ttacccggcc attgtaatac tccagccggc ggctgccgcc ggccgacacc
       61 acctccgcgg tgagcacatc gcccagccgg accggagccg gatagcggat cccgttctcg
      121 atgctcaccg tcacctggcc cccaccgttg caggcgaagg ccagcgcgct gtcggccagg
      181 ctgtaggcca cacccccgtg caccacgccg aggccgttta ccatgtcgtc ccttacggtc
      241 aggcggcagg tgcaggcccc gaccccgagc gccaccacct cgagccccag ccagcggctg
      301 aattcgtcgc gggccagcat cccctccacc acccgctcgg ccacccgctg ggcgtcggtc
      361 acgagtagaa gctccgcccc tcgcgggcca tgcgccgcag caacgcgctg ggacggtatc
      421 ggtcttcgcc gtactcgtcc tgcagcgcga ccagccgctc gaacaccacc gccaccccga
      481 tctggtccgc ccacagcagc aggcccctgg ggtagttcac ccctttggtc atcgccagat
      541 cgatgtcggc cgcgctggcg atgcgcagga acaccgcgtc ggcggcctcg ttgatcagca
      601 tggccacgat ccgatcgaca atccggtggc cgagggcctc gtcggtgacc ggcggtgcca
      661 ccggcgaggc accgtcgcgg tagtcatacc acccacggcc gctcttccgg ccgaagagcc
      721 tggcgtccac caggcgacgc tgcagcagcg aagggcgata gcgcggatcg taggcgaagg
      781 cctcgaacac cgaccgggtg acggcatagt tgatatcgtt accgatcagg tccatcagct
      841 cgaacggtcc catgcggaat ccacccagct cccgcatggc ccaatcgatg gtgacgggct
      901 gggcgacgcc ctcttccacc aggcgaagcg cttcgccata gaatggccgc gccacccggt
      961 tgacgatgaa gcccggcgtg tcggcggcga tcaccggcgt cttcccccag cggtcgacca
     1021 gactccggat ctcctgtagc aggactggat cggtggcgta gcccccgacc agctcgacca
     1081 gcggcaacac cggcgcgggg ttgaagaagt gcatgccgag cacccgctcg gggcggcgac
     1141 aggccgaggc gatcgcggtg atggacagcg aggaggtgtt gctcgccagg accgcgtcgg
     1201 ggccggtgct ggattcgagc gtggtaaagg cctgctgctt ggccgaaaga tcctccacga
     1261 tcgcctcgac caccaggccg cagcgctcgt acaggcggta gttgccatcg gtaggcccgg
     1321 tccggatccg gcccatgatg gcatcgactt cggccggcgt ccggcgggct ttctcgacct
     1381 cgcgatcgag cgccttcttg atgccggcca gtgctcgggc cagcgcggcc tcgctcaggt
     1441 cgccgagtac caccggatgg cccgcggccg cagccacctg ggcgatgccg cttcccatcg
     1501 cgccggagcc gaggatgccg atcgcggtgg aggcggacag gcccatctac cggcccttga
     1561 acgtcggagc ccgcttttcg agaaaggcgg agacaccctc ggtgtagtct tcgctccggc
     1621 ccgccgtccc ctgcagctcg gcttccagct cgagctgggt gtcgaggtcg ttcaccagag
     1681 aagcgttgag caggcgtttg gtgagaccca agccgagcgt cgcgtgagcg gcgagggagc
     1741 gggccagctc caggctttcc tcgcgcagcc ggtcgggctc gacgacgcga tagatcatgc
     1801 cgaagctcag agcctgctcg gccgtcacct tctcggccag catggtcagg gctgtggcgc
     1861 gggccaggcc caccagccgg ggaaggaacc aggtgccccc ggtgtccggc accagtccga
     1921 tccgggtgaa ggactggatg aacgaggcct ggccggaggc gaggacgaaa tcgcaggcga
     1981 gggccaggtt ggctccggcg cccgccgcca cgccgttcac cgcggcgatg accggcttgg
     2041 gcaggccgcg aatggcccga acaatggggt tgtagacggt ccggacgtgg accgcgaagt
     2101 ccttgggcgt ttcccccgag gccggccggg cttcatcgag atcctgaccg gcacagaacg
     2161 ctcgaccggc accggtcagg atgacggcgc ggacgcccgg atcctctgcg gctgccgcga
     2221 aagcggcctg cagctcggcc gccatggccc cattacagct gttcagcacc tcgggccggt
     2281 tgagcgtcat ggtgagcacg ccctcggccg tttccgtcag gatgaactgg ttcggcatgg
     2341 cctccgaata taagcttcgc ccatgcgtga cgccttcata gcggacgggc tcagaacacc
     2401 gatcggggct ctgggcggga gcctgtcatc ggttcgggcc gacgacctgg cagcccacgt
     2461 cctgcgcggg ctggtggccc gccacagcgc tctggatccg gcgcgtatcg ccgacgtgat
     2521 tctgggttgc gccaaccagg ccggtgagga caatcgcaat gtggcgcgga tggccctgct
     2581 gctggccggc atcccccacc tggtgccggg cgagaccgtc aaccggctct gcgcctcggg
     2641 gctgagcgcc gcggccagcg ccgctcggag cgtcgccgtc gggcagggcg acatctacct
     2701 cgcgggcgga gtggagcaga tgacccgggc gccttacgtg ctgtcgaaga cctcgcagcc
     2761 gttcggacgc gatgcccagt tgttcgatac ctcgctcggc tggcgcttcg tgaacccggt
     2821 gatgagggag cgctacggcg tcgattccat gggccagacg gcggagaatg tcgccgagct
     2881 cttgtcgatc ggccgggagg atcaggatcg gttcgcgctc cgatcgcagc agaaggcggc
     2941 ggcggcgcgg gcggcgggac ggttcgtccg cgagatcctc cccgtggaaa cgccgccgcc
     3001 gggccgaggc aagccgtccg ggctgatgga tcaggacgag ttcatcagac ccgacactac
     3061 gctcgaggtc ctgggcaagc tcaagccggc cttccgctcc ggcggcaagg gaacggtcac
     3121 cgcgggcaac tcgtcgggcc tgaacgacgg cgcctgcgcg ttgctggtgg tctcttccac
     3181 cgggctcctg gccctcgggg tgcagccgct ggcccggatc gtggcgtcgg tggccgtagg
     3241 cgtggaaccg cgcctcatgg gcctgggtcc ggtgccggcg acccgcgcgg tgctggagcg
     3301 ggcccagctc acgctggacg acctcgaggt gatcgagctc aacgaggcct tcgcctccca
     3361 gagcctgggc tgtctgcgcc agttaggcat gaccgatgac gatccccggg tcaacccgaa
     3421 cggcggggcc atcgcgctgg gccatcctct ggggatgtca ggcgcgcgcc tgctcctgac
     3481 ggcggcccac gagctggcag agcgaagggg tcgttatgcc ctctgcacca tgtgcatcgg
     3541 ggtggggcag gggatggcga tgatcctgga gcggatgtga gtcagtcgaa ggggtcgaag
     3601 ggggtcgagc tctgatttca tgatctacca attcgacggc attactcccg tagtccaccc
     3661 ctccgcgttc gtgcaccccc aggccgcggt gaccggcaac gtcgtcatcg ggccggattg
     3721 ctacatcggg cccggcgccg cgctccgggg tgactggggc gggatcatcc tggaagacgg
     3781 ctgcaacgtg caggagaact gcaccatcca catgttcccc ggggtcacgg tggtgctgga
     3841 ggcaggggcc cacctcggtc atggggcggt ggtgcacggg gcccggatcg gccgcaacgc
     3901 gctggtgggt atgaacgcgg tggtgatgga tcgcgcggtg gtcggccccg gcagcatagt
     3961 cggcgcgctc agcttcgtgc cggaaggcat ggagatcccg gagcggaagg tcgcggtcgg
     4021 gaatccggcg cggatcgtga aggacgtgag cgaggagatg ctggagtgga agacccgggg
     4081 aacggcgctc taccaggcgc tgccggccca gctgcaccag cgtctggtgc cggtcgaacc
     4141 tctccgcgac ataccggctg accgcccggt gcagccgggg ggatatcgcc cctggaagac
     4201 gacgcaggat tcgtgacgac aaaggaagcc cgatgaggct caagaattac gtccaggacc
     4261 gctgggtcga aggtaccggc ccggcggcga cgctctatca cgcggtgacc ggcgagccgg
     4321 tggccgaagc caccaccggc ggcatcgact tcaaagcggc gctggagtac gcccggcgga
     4381 ccggtggacc ggcgctccgg cggatgacct ttcacgagcg ggcccggatg ctcaaggcga
     4441 tggcccagta tctcatgggc cggaaggacg agctctatac cgtctcggcc gtaaccgggg
     4501 ccaccaagac cgactcatgg gtcgacatcg aaggcgggat cggcaccttc ttcacctacg
     4561 ccagcaaggg ccggcgggag ctgccgaacg agaccttcta catcgacggt gagttggagc
     4621 cgctctccaa gggcgggacc ttcatcggcc gccacatttg cgtcccgctc gagggcgtcg
     4681 ccgttcacat caacgccttc aacttcccct gctggggcat gctcgagaag ctggccccga
     4741 ccttcctggc gggggtgccg gcgatcgtga agccggcgac cgcgacctcg tttctcacca
     4801 acgcgatggt gcaggcaatg ctggacgcgg acctgctgcc ggccggcgcg ttgcagctcc
     4861 tctgcggcgg tgtgggtgac ctgttcgagc atctgaccgg acaggacgcc gtcaccttca
     4921 ccggctccgc ggccaccgga cgcaagctca agtgccaccc tcaggtcatc accgaatcgg
     4981 tgcgcttcaa catggaggcc gattcgctga acttctgcct gctgggtccg gaatcggagc
     5041 cgggcaccga ggagttcgac ctcttcgtca aggaggtggc gcgggaaacc accctcaagg
     5101 cgggccagcg ctgcaccgct atccggcgcg ccatcgtccc cgagaagctg gtgcagccgg
     5161 tcatcgcggc cctttccaag cgtctggccg gtgccaccct gggcaatcca ggcgccgacg
     5221 gcgtgcgcat gggccccctg gccagcaggg atcaggtgcg cgaggtccgg aagagcgtcg
     5281 agagcctcaa ggccggcgcg gagctggtgt acggcgatct cgacaatttc agcgtggtgg
     5341 gggccgaccg cgacaagggc gccttcttcc ccgccacttt gctctactgc cgtgacccct
     5401 tcggccgttc cgaaccgcat gacatcgagg cgttcggtcc ggtgagcacc gtgatgggct
     5461 atgccaccct gaatgacgcg gtggagctgg tgaagcgggg ccgaggcagc ctgtgcggat
     5521 cagtgttcac ctcggacgac ggcgtggccc gggaagtcgt gctcggcacc gcggcctatc
     5581 acggccgcat catgctgctc aaccgccaca gcgcgaagga atccaccggg cacggctcac
     5641 ccatgcccca cctggtgcac ggcgggccgg gccgcgccgg cgggggcgag gagatgggtg
     5701 gcatcagagg cgtgctgcac tacatgcagc ggaccgcgct gcagggtcac cccacgactc
     5761 tgtcccgggt gatgaacgtc tggatgaagg gcgccgagat gctgcgcgac cggatccatc
     5821 cgttccgcaa gacctgggac gagctccgga tcggcgagac ctggatcacc ccgcgacgca
     5881 ccgtgaccga agccgacgtg gtgcggttcg cggggatctc gggcgacttc ttctacgccc
     5941 acatggacga catcgcggcc aaggagagcc tcttcggcaa ccgggtggcg cacggctact
     6001 tcgtgttgtc cgccgcggcc ggcttgttcg tggatcccgc tcccgggccg gtgctcgcca
     6061 actacgggct ggaggcgctg cgtttcacca agccggtcta cccgggcgac accatccagg
     6121 cccggatcac ggtgaagcag aagacggcca aagagccggt ggaaggacag ccgccgcagg
     6181 gcgtggtggc gtgggatgtc gaagtgacga atcaggaagg tgaaacggtg gctatctata
     6241 ccattcttac tttggtccga aggtcgtaac ctttccgacg aattcattgt ccccgcttgg
     6301 cgagctcctg ctgggccggc tcatgcccct tggccgccgc ccggcggagc cactgcattc
     6361 cggtggtatc cgactgggcc acgccttgcc cgatgaaata cgccatcgcc agctgatact
     6421 gcgattcggc atcgccggcc tcggctcccc gctgatacaa ccgggccgcc tcggccaggt
     6481 tgcgggaaac gccgcgtccc tgggtgtaga gctcggccaa gcggacgaat gagggaatgt
     6541 cgttcttgat gacggcgcgc cggtaccagc tgaccgcttc gcgctcgttc ttctgcactc
     6601 cttggccggt gacgtacatc cgggcgatcg ctcgcatcgc ggccggtact ccgcgcccgg
     6661 cggcctgccg atagaagccg gctgcatccg tgatgctctg ggtgacgccc cgaccttctt
     6721 catacattac gcccagccgg aaggctgcat ccgccgagcc cgccgtgctg gctttgcgat
     6781 accactcggc ggcagcagcg agatctgcca cggtaccctg gcctcgttcg tggagcccgg
     6841 ccagcgccac catggcggca gggttgccct ggtcggcttc ggcctgacat tgggtcaacg
     6901 cgacgggcca agccgaggcc cgcaccgcgt cggcgcaggt ctcgggagcg gggacggtct
     6961 tgggggcagt atcctcccga atcaggctgg ggcgggacgg ctcgaccggc gtcgacgggg
     7021 tcggttcggt ggagcgagtg gctcggtccc tgggagcggg acgttgcgga gcgggagcct
     7081 tggtttgctc cgatggcggc ggtggaggag gcgccgctgt tggcggaggc gccgtgtctg
     7141 acgcgggagg cgcggcctga cgggcgccgc tcgacgaacc ccggctcacg gccaccgcga
     7201 tgacggcgac cagcgcgatc ccggccactg cgaccagccc cagcctccgg ttcttacccg
     7261 gcttggtcac ccgcgaggct gccggcttgc ccgcgatcac ccgcgcggtg gtcttggcct
     7321 gtgccttttc cttagcccga tccttcgcct tgtccttctc agccgccttg gccgaggcct
     7381 tccgttccgt ggtgtcctcc tgcaggcagg ccgcggcgaa ctcgtcgatc gtcgtgtacc
     7441 gatccttgga atccttggcc attccgcggt gcagcgcgtc ggacagcgac tggggaacct
     7501 ccgggaagcg ctcccgggcc cgggcgggcg tctcgaagac ctgcttgtaa agcagagccc
     7561 gggtggtttc gccgtcgaac ggatgggcgc cggtcaccat ccggtagccg agcaccgaca
     7621 gcgaatactg gtcggaacgg ccatcaaccg gctcgccgct ggcctgctcc ggactcatga
     7681 agtgcggcgt tcccacgatc agaccgcttg acgtcatccc ggtctgttcc gggtccagcg
     7741 ccttggcgat accgaagtcc atgacgagga cctgctgctt cggaccctcg agcatcacgt
     7801 tttcgggctt gatgtcccgg tgcaccagcc cggcttcatg ggccaccgag agcgcgttgg
     7861 cgatctcgcg gatgatgcgt cgcacttcgg ggatgggcag acggccttcg cgctccaacc
     7921 gcttcttgag cgtctcaccc ttgatcaggg gcatcatgat gtaggcgatg ccacccgatt
     7981 caccgatatc gtagatcggc acgatgcccg catgacgcag ggccgcgacc gcttccgctt
     8041 cccggcggaa ccggtgcagc atcggctggt tcaccaccag ctcgggcgac aacaccttga
     8101 ccgccaggtc gcgtttcagc cggttgtccc ggaccgcgaa tacctcggcg aacccgcccc
     8161 gaccgaccag ctcccctacg gtgaagttgc cgcccagcgc cttgtccaga cgcttgcgta
     8221 cgtccaccac cgccgccgcc gactgcagcg aaggacgggt ggacgccaca ccgctatccg
     8281 cacgcatccc tgtcggcgtc ggcgttccgc agacgtagca gaactgagcc gcatccggta
     8341 ggggcgtgtg gcaagaagga caaacgagtt ggtcggtcat gaacccacga gctgaattct
     8401 gaacaataca cacatagaac cagggtgtgt caagaaacag acagtctcgg ctgcctcacg
     8461 attgatgcca accacggttc gatcaccgct ctcgtctctg ccgggtggct ctgcgggaac
     8521 aggtgcccgg ccccggggat ggtggcgaaa gtggccccgg gcatcagctt ccgcagttcg
     8581 tctgaagacc gcgtgacgaa agtatcgctg gcttctccgc ccaccacgag ggcaggtatc
     8641 gcggggtcga gttgtggtac gatgtcccag gtgtgggggt agaaggagcg gtaataccac
     8701 gcttcccact ccggaggcca caccagggtc cagcccccag cgggatttgg ccgaagcatc
     8761 gcgctggcgt accgctccag agcctggtcg ggccagtccc ggaacaagtc cttgccgcgc
     8821 cagtactcga acgcctcctg cagcgagccg aaccggctcc ggcgcttgag ggctgtatcc
     8881 accagtcgca accgcggact gcggccggcc gcgagctcgg cggcgtagcc ggacatgagc
     8941 tcacggggca tgatggtcgg atcgagcatt atcagggcgg ctaccgatgc gggcgatcgt
     9001 accgcggcca acaacgaggc gacggcgccg aacgaatgcc ccagcgccac caggggagac
     9061 aaccgatggc tttcccagcc ggccagcagg tcgtccgcca gcgattccca cgacccggcc
     9121 tccgcggggg gtggcccccc gccgacccag agggcgcggg gagataggca gacgatccgg
     9181 aagcgatctc gcaatcggac gaacaggggt tcgtacgtgg ccggcgggaa gccgttggcc
     9241 aatgcgagat ggaggaccgg tccggttccg cccagctcca gtagcggtgg tttcacggga
     9301 gaacgaccac gggtgcgcct tcgggtagcc atgagccggg gtgcgcgaga acccgggcgg
     9361 tcccgacacg ctccggtccg gagggcggcc aggggggcat ccgctccagc tcgggagtga
     9421 aatcaaggta gtagagcgcg gacccggcgt tccgggcgtg ctcggccacg agcccggcca
     9481 gggctccaga ccagtgcccg gccggaacct ccggaccgcg gggccgggtc cggtgacgct
     9541 ccatcgcttc gatgacttgt gcccgcggca cccggtcctg acggtagcgg gttctgagcg
     9601 agcgctcgtc ctccgctccg tccgggttgc gccggccggc caggtcgcag gagcacccgc
     9661 cgtgccgcag cagcaccgct gttttcgccc gatggaggtg atccaggaag aaccgctgca
     9721 gcgaaggatt gagcaggtcg gccgtcacgt cctcgggcag catggagcgt atctcactca
     9781 gggtgagtgg actcgtgagg taaaggcgaa agcacacgac agcgagtcag actcggtctt
     9841 catccggatc gcgaaccagt accagtatcg cggcctccgg gaccaccaga tagcgttctc
     9901 cctcgaaggt gatctccacc gatgccttgc ggaagaaaat ggcatgatcg ccggcccggg
     9961 cctgcatggg ccggtgccgg acgtgctgcc gagtcacctt ccagggctcg tcctcgaacg
    10021 cggtcgggtc cggcaccgga tcgcccggac cggtcgcgac gattcggccg ctctgcacct
    10081 gctgggagtc gaccgcggtg gcggggagat agaggccgac ccgggtgcgg tcctcgcctt
    10141 cctcgggtac gatgagcacc cgatcgccca ccacgtgcag tttgccgctg aaagactggt
    10201 ccacgctcat ccccccgcct ggtcgtacac ggtgcggagc tcgaccaccc gcaagcgccg
    10261 ggcgccgtga ggcaggcgca gacccacctc gtcgccgacc tgcctgtcct tgagggcccg
    10321 acccagcggg gacgcaagtg agatatggcc ggcatcgatg tccatcattt cagccagcac
    10381 cagggtatag gtatcggtgc cgttggtgtc caggtcgagc accacaacct cggagcccag
    10441 gccgacccgg ccggtgggcg cttcggcgct ggacagctca cccagctggg ccatgcgctg
    10501 gtgcagttgg cccagccggg cctgcacgaa ctgctgccgc tccagtgcgg ccttgtactc
    10561 ggagttctcc cgcagatcac ccatctcgac cgctgaagcg atggcacgag gaagcgtgaa
    10621 gttgagctcg taggtcaacg cctcgatctc ctttcccagc ttgactcgca tcgcgtcgat
    10681 catgggctca tcccgggtaa aaaaaggccg gcccggcgct ggagcgccgg gctggggtct
    10741 gttac
//
LOCUS       DASWKS010000449        12330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2469987, whole genome shotgun sequence.
ACCESSION   DASWKS010000449 DASWKS010000000
VERSION     DASWKS010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2469987"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1045
                     /locus_tag="VGA78_12705"
     CDS             <1..1045
                     /locus_tag="VGA78_12705"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9894781.1"
                     /translation="TVAAKLSEVSLALQKAEAVYEQAMLDSTLNLSKAREEIRSMELG
                     LEEKRLAKEQSAYEAPTVKRQAEIDLEKAQRALAQAKVDYKTKTEQAQAKMREVGADQ
                     QRQRNQLKIVQTVMEGFTVKAPAPGMVIYVKEWNGKKKTTGSQVSSWEPAVATLPDLT
                     QMESITYINEIDVRKVATGQPAVITLDSDPSKKLTGSVTSVANVGEQRPNTDAKVFEV
                     RVTVDQADTTLRPGMTTGNAIQTSKVDSVLFVPLEALNTEAGVPFVYKQSGSRVRKQE
                     VVTGIMNEDEVVILKGLDEEDRVLLTPPPDKDRLELVRLPGSAPAGPTAGGDTALGTV
                     TVPPANAPPPKKN"
     gene            1049..2449
                     /locus_tag="VGA78_12710"
     CDS             1049..2449
                     /locus_tag="VGA78_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894782.1"
                     /translation="MAWDIATLARLRAQARAHVLFGMRTAIEAVQHNKLRASLTSLGI
                     LFGVASVIAMLAIGRGAEQEILEQMRLLGSNNVMITPIVVQKEEEAKDRQEKEVKRYS
                     PGLSYADARAIARVVPQVEVASAEIVLNTTITREGLRRSGKVVGVDTTYFRLTNLDLG
                     SGHWFNQLQVERGLPVAIIGNGVRTRFFTTEDPIGKPIKVKDTWVTVVGVLTDRRFSE
                     ETSQRLGIRDANMDVYVPVNTMLLRFRNRAMLTQRDIELAAREVTVTNNAEASTESEE
                     ERQERTNRNQLDRIIVRVSDSRQVPAVADVTRRLLTRRHNSVVDFEITVPELLLKQEQ
                     RTKTIFNVVLGAIASISLVVGGIGIMNIMLASVLERIREIGVRRALGATRNEILFQFL
                     SEAVLISVAGGVAGILLGVGLSAGIEQAAGIRTIVSYLSVVIAFGVSFAVGLGFGIVP
                     AYRAAQQDPVTCLRYE"
     gene            2455..3921
                     /locus_tag="VGA78_12715"
     CDS             2455..3921
                     /locus_tag="VGA78_12715"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9894783.1"
                     /translation="MPISPFLRAFTGHVVAALALATPPLAAQQPMTLQQAISQAQQQG
                     YQAKAAEASREAARYRDRAFYSRLLPQIGLEGTLPDYNRSIIPVLQPDGTTIFRPQNQ
                     TSASLTATMSQTLPLIGGDFFISSSLASLKVTGEETTRTWSSTPISVGLRQPLFRPNV
                     AGWDRREQPVRYEVTERQYREAREDIALQTATLFFDVYAAQVQLQNTATNAAVNDTIF
                     TLNKGRYQVGRIGENDLLQSELALLRARTALDGARLEHQRTLAALRLAMNLPIGAPLE
                     IDGSVVIPRVEADTVVAVAQALRNRASISEAELQEVQAERRVTEARLNNGFGATLLAT
                     YGLNATAPEASLVYSNLLEAQRFSFSVQVPLMQWGVRKETVRAAEADRERVANTSRST
                     IEQTRQDAHFAALQLAQAQRTLALSITADSVAGKRFEVAYNRYVIGRITIDNLFIAQN
                     EKDQARNQFVQALRGYWQAYYRLRRVTLYDFETGQPIQ"
     gene            complement(4348..4692)
                     /locus_tag="VGA78_12720"
     CDS             complement(4348..4692)
                     /locus_tag="VGA78_12720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894784.1"
                     /translation="MVNSDLQPEAESVYAAVTRWAGHASLRLLTLFTTIGFGGAALVL
                     LVDWRRWPLAGLLLGAGAIGTWGIVEQRAHRPHSRMVNAAEWTLAVVGTLIAMLAALG
                     LFFWAMGPAPIL"
     gene            complement(4753..5529)
                     /locus_tag="VGA78_12725"
     CDS             complement(4753..5529)
                     /locus_tag="VGA78_12725"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX9894785.1"
                     /translation="MRMPIERYVAIGDSSTEGLDDPDGRGGFRGWANRLAEHIGAIQG
                     SLLYANLAVRGRRTRQILEQQLEPALTMRPNLATIFSGTNDVVAARFDADSVAVDMER
                     MQRALIGAGATVLTFTLPDLTPVMPLGRVIAPRVRVLNQALRGAAAMSGAILVDVAAH
                     PVASDPRLWSRDRLHANSLGHSRIAAALAHAIGLPGSDESWSQPLPGLRPRGRLEWVT
                     AEIAWVRLHLLPWVWRHLRGHSSGDGRNPKRPELQPVEVI"
     gene            5731..6345
                     /locus_tag="VGA78_12730"
     CDS             5731..6345
                     /locus_tag="VGA78_12730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894786.1"
                     /translation="MARDAREAVNSYITDMLALEDDFEKALGAQVADFEKERPEVVSQ
                     LRRIHDLCEQHISNLKDLSERRGGGPAMGLAEAVKRAGSTLAGIGAAAITVMRTEKLP
                     KNLRDDFTALNLGAIGYTMLYTTAMSLDEPTVADVAQRHLRDYAEAVMTLHNLIPGAV
                     ITFLQEEGLAADSEVLPTVHRTLDDIWRSVSVTPGATFQPGSNR"
     gene            6699..7913
                     /locus_tag="VGA78_12735"
     CDS             6699..7913
                     /locus_tag="VGA78_12735"
                     /inference="COORDINATES: protein motif:HMM:NF036554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEX9894787.1"
                     /translation="MSAHRCVPVRGAIRQSARALIRCLACCLVWGTGAPALLAQDAKV
                     KVEIEGINGDLERNVRAVMELSRAADNGKLSRWRIGQLHQRADEDILVALEPFGYYRP
                     HVDKFLERSGEEWIARYVIEPGPAVMVRSVRVELTGPAAEEPFFRDVAAGFPLKVGEP
                     LQHPLYEAGKLALLTAATDSGYLDADFDTSAVIVDRDAGTADVRVIFHTGERFHFGPV
                     WFDQDILDDEFLQTRVPFAQGDLWRQDRLLKLQNTLVEDPYFARVDILPRRDSAQGLE
                     VPVQVSLAPNKRLEYELGAGYGTDTGPRGRAAGLWRWVTRGGHHARADITLSLVEQNG
                     SAQYTKPAFLTPTGTLTFVGGYAQRLLETSDSRILTGGIRVGRKRFGWREQLSFSWQR
                     EAFEVGPDTGVR"
     gene            complement(8045..8614)
                     /locus_tag="VGA78_12740"
     CDS             complement(8045..8614)
                     /locus_tag="VGA78_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894788.1"
                     /translation="MRATCWCCLTALFLSNCGSDDSGPSVSFSGQAADPSGDGGTADL
                     IFASLEVIGSNIKLRAEVTPGSFHRDSLLVVFNLDADEQAATGYTTANPGHSGLGIDC
                     LIELGKVTSGTLGARVRSYENGVFITAASADVTSLSQGYEATVPLGACGDDGQALMRI
                     EAFRQVSAQAYTIRQDWLPDPIIAPIAVR"
     gene            complement(8623..9156)
                     /locus_tag="VGA78_12745"
     CDS             complement(8623..9156)
                     /locus_tag="VGA78_12745"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX9894789.1"
                     /translation="MTRVTTKQILEATIDTIVTNGLTDWTVEMAASKAGCAKGLVLYH
                     FGTKGALLNAVADRVRSDRGERRVAALAAAGARALDNLWAALEDEVNRGTAALWLGLV
                     SNRATRAPGSTTAADRVRLAEAAATALGLPMADALEELADALNGFELALIQGRDTALV
                     RESYDRYWLSLLSPEPT"
     gene            9322..9777
                     /locus_tag="VGA78_12750"
     CDS             9322..9777
                     /locus_tag="VGA78_12750"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9894790.1"
                     /translation="MSADTHTPMPSVFSPLAKSLLDSFSEGVIVFDAQGRVIYLNQPA
                     REAMGDKFDLTLPARELMPLLAQLGGRLRPLRVGNLELGEAMFLPSVEGPSTLAEREK
                     EAIVRSLDAHGWRLAETARSLGISRTTLWRRLRAYGLHRDGRNRFAQAS"
     gene            9885..10400
                     /locus_tag="VGA78_12755"
     CDS             9885..10400
                     /locus_tag="VGA78_12755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894791.1"
                     /translation="MHIRYVVLLAAAFAGCGEEDPAPGELVVEWAGHEHGRFVAPLAA
                     THCAATGVVELIAIRGDTGLASALFLSDSTDLRTGDYPIFLAATAPEPRPGAVAALRW
                     FNLTSIVAYEGLSGIVHVEPGEALLSGRFDVKLQGIDQPDTLRVTGRFDGVPLAQGDS
                     TCSRTMRRNTL"
     gene            10410..11621
                     /locus_tag="VGA78_12760"
     CDS             10410..11621
                     /locus_tag="VGA78_12760"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX9894792.1"
                     /translation="MESSYFRKGFGLKTAIEPLLAADYASRVVDAVRARGYVLQAPPL
                     SFRLAREFGFCYGVDRAVEYAYETRTKFPDRRLFLVGEIIHNPHVNARLEEMGVTFLR
                     HGADEVFDFSGLSPDDVVLLPAFGITVTDFQRLRGIGCVVVDTTCGSVLNVWKRVESY
                     ARDGFTAIIHGKYWHEETRATASQVTKYPNGKFLVLLNMDEARMVIDFMERGGDPAPL
                     VGRLGNSSSPDFDFVRDLERIGFANQTTMLAGESLAIAEEFRQAMLRRHGAEAAAAHV
                     RTFDTICSATQERQDAVVKLLEDPPDLMLVIGGYNSSNTTHLAALSAGRGVRTYHIED
                     AGGIDPEAGTIRHQPVRQKRDVVDGPGWLGDARVIGITAGASTPNNKIGEAIARVCAT
                     ASIDLEAALLR"
     gene            11694..12059
                     /locus_tag="VGA78_12765"
     CDS             11694..12059
                     /locus_tag="VGA78_12765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894793.1"
                     /translation="MTDRILLRQRLLGLPRVVTRKMFGAEAYFIGPAMFAFFTPTALV
                     LRLPPSALTESVALGVARPFLSFGAAQVNGWAELTLEGRAPGELEKWLLAAHASGTHA
                     ARSAARRKRPARARRIARR"
     gene            complement(12097..>12330)
                     /locus_tag="VGA78_12770"
     CDS             complement(12097..>12330)
                     /locus_tag="VGA78_12770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894794.1"
                     /translation="RALLRPGRTYQDAVHLFKPYDRIRDPQPELRRDLARLANTARRL
                     RIPAYIIVNNRAEGSAPHTIAAVARMLAEGRTD"
BASE COUNT         2181 a         4044 c         4054 g         2051 t
ORIGIN      
        1 caccgtcgcc gccaagctgt cggaggtgag cctcgctctc cagaaggcag aggcagtcta
       61 tgaacaggcg atgcttgact ccaccctgaa tctttccaag gcgcgggaag agatccgcag
      121 catggagctg gggctcgagg agaagcggct ggccaaggag cagtcggcct acgaagctcc
      181 caccgtcaag cgtcaggccg agatcgatct ggagaaggcc cagcgcgcgc tggctcaggc
      241 caaggtcgac tacaagacca agaccgagca ggcccaggcc aagatgcggg aggtgggcgc
      301 cgaccagcag cggcagcgaa accagctcaa gatcgtgcag accgtcatgg aagggttcac
      361 ggtcaaggcg cccgctcccg gcatggtcat ctacgtgaag gaatggaatg gcaagaagaa
      421 gaccaccggg tcacaggtct cttcttggga gcccgccgtc gccacgctgc ccgacctgac
      481 ccagatggag tccatcacct acatcaacga gatcgacgtc cgcaaggtcg cgaccggcca
      541 gccggcggtc atcaccctcg attccgatcc gtccaagaag ctcaccggca gcgtgaccag
      601 cgtggccaac gtcggcgagc agcggcccaa taccgacgcc aaggtgttcg aggtccgggt
      661 caccgtcgac caggccgaca ccaccctccg gcccgggatg accaccggca acgcgatcca
      721 gaccagcaag gtcgacagcg tcctcttcgt gccgctcgag gcgctcaata cggaagccgg
      781 cgtgcctttc gtatataagc agtcgggcag ccgggtccgg aagcaggaag tggtcaccgg
      841 catcatgaac gaggatgaag tcgtgatcct caaggggttg gacgaggagg atcgggtcct
      901 gctgacgccg ccacctgaca aggacaggct ggagctggtc cggctgcctg gctcggctcc
      961 cgccggcccc accgcaggcg gcgataccgc gctcggcacc gtgacggtgc cgccggcgaa
     1021 cgctccaccg cccaagaaaa actgagcagt ggcctgggat attgctaccc tggcgcggct
     1081 ccgcgcgcag gcgcgggcgc acgtgctgtt cgggatgcgc accgccatcg aagcggtgca
     1141 gcacaacaag ctgcgcgcct ccctgacctc actcggcatc ctgttcggcg tcgcttccgt
     1201 catcgcgatg ctcgccatcg ggaggggcgc ggaacaggag atcctggagc agatgcggct
     1261 gctcggctcc aacaacgtga tgatcacgcc gatcgtggtg cagaaggagg aggaggccaa
     1321 ggaccggcag gagaaagagg tcaagcgcta ttcgcccggc ctctcctacg ccgacgccag
     1381 agcgatcgcc cgggtggtgc cacaggtaga ggtcgccagc gccgagatcg tgctcaacac
     1441 caccatcacg cgcgaaggac tgcgccgctc cggcaaggtg gtgggcgtgg acaccaccta
     1501 cttccgcctc accaatctgg acctggggtc cggccactgg ttcaaccagc tccaggtgga
     1561 gcgaggcctc cccgtggcca tcatcgggaa cggggtccgg acccgtttct tcaccaccga
     1621 ggatcccatc ggcaagccga tcaaggtgaa ggatacctgg gtcaccgtgg tgggggtcct
     1681 gaccgaccgg cgcttcagtg aagagacctc gcaacggctc ggcattcggg acgccaacat
     1741 ggatgtctac gtgccggtga acaccatgct gctccgattc cgaaaccggg ccatgctgac
     1801 ccagcgcgac atcgagctgg cggcccggga agtcaccgtc accaacaacg ccgaagccag
     1861 taccgaatcg gaggaagagc ggcaggagcg caccaaccgc aaccagctcg accggatcat
     1921 cgtgcgggtg agcgactcga ggcaggtgcc cgcggtggcg gacgtgactc gccggctgct
     1981 gacccggcgg cacaattcgg tggtggactt cgagatcact gtgccggagc tgctcctcaa
     2041 acaggagcag cgaaccaaga ccatcttcaa cgtggtgctg ggcgccatcg cgtccatctc
     2101 gctggtggtg ggcgggatcg gcatcatgaa catcatgctc gcgtcagtgc tggagcggat
     2161 ccgggaaatc ggagtccggc gggccctcgg cgccacccgc aatgaaatcc tgtttcagtt
     2221 cctgagtgag gcggtgctga tcagcgtggc gggcggggtg gccgggatcc tcctgggcgt
     2281 gggactgagc gccgggatcg agcaggccgc cggcatcagg accatcgtgt cctatctctc
     2341 ggtggtcatc gcgttcgggg tgtccttcgc cgtcgggttg ggctttggta tcgtgccggc
     2401 ctaccgggcg gcgcagcagg acccggtgac ctgccttcgc tacgagtaat cgccatgccg
     2461 atttccccat ttctccgtgc cttcaccggg cacgtggtcg ccgcactggc gctggcgacc
     2521 cccccgcttg cggcgcagca gccgatgacc ctgcagcagg cgatctccca ggcccagcaa
     2581 cagggctatc aggcgaaagc cgcggaggcc tcccgcgagg cggcccgtta tcgtgaccgg
     2641 gcattctact cccggttgct gccccagata gggctggaag ggaccctccc ggactacaac
     2701 cggtcgatca tcccggtgct gcagccggac ggcaccacca tcttccggcc ccagaatcaa
     2761 accagcgcct cgctcaccgc caccatgtcc caaaccctcc cgcttatcgg cggtgacttc
     2821 ttcatctcgt cctcgctcgc gtcgctcaag gtgaccggcg aagagaccac ccggacctgg
     2881 tcgtccacgc ccatttcggt ggggctcagg cagcccctct ttcggcccaa cgtcgccggc
     2941 tgggatcggc gggagcagcc ggtacgctac gaggtgacgg agcgtcagta ccgggaggcc
     3001 agggaagaca tcgcgcttca gaccgcgacc ctcttcttcg acgtctacgc ggcccaggta
     3061 cagctgcaga acaccgccac caacgccgcc gtgaacgaca ctatctttac gctgaacaag
     3121 ggccgctacc aggtcggccg gatcggggag aacgatctgc tgcagagcga gttggctcta
     3181 ctccgggccc gcaccgcgct cgacggcgcc cggctggagc accagcgcac cctcgcggcc
     3241 ctccggctgg cgatgaacct gccgatcgga gcgccgctcg agatcgatgg ctcggtggtg
     3301 atcccccggg tcgaggccga taccgtggtc gcggtggccc aagcactccg aaaccgcgcc
     3361 agcatcagtg aggccgagct gcaggaggtg caggcggagc ggcgggtgac cgaagccagg
     3421 ctcaacaacg gctttggagc cactctgctg gccacctacg gcctcaacgc caccgccccg
     3481 gaagcgagtc tggtctactc gaacctgctc gaggcccagc gattctcctt ctcggtccag
     3541 gttccgctga tgcagtgggg cgtgcgcaag gaaacggttc gcgccgccga ggccgatcgg
     3601 gagcgagtgg cgaatacttc gcggtccacc atcgagcaga cccggcagga cgctcacttc
     3661 gcggcgttgc agctggccca ggcccagcgc acgctggccc tgtcgatcac ggcggactcg
     3721 gtagccggga agcggtttga ggtggcctac aaccgttatg tgatcggccg catcaccatc
     3781 gacaacctgt tcatcgcgca gaacgagaag gaccaggccc ggaaccagtt cgtccaggcc
     3841 ctgcggggat actggcaagc gtattaccgg ctccgccggg tcacgctcta cgacttcgag
     3901 acggggcagc cgatacagta ggccgtcgtg acacacgaat cccttcaatg atctggcgtc
     3961 ttgacgactc cgagatggct cttggtgccc caacgtgaaa actgacaagt gccgcaacag
     4021 caatccgcag atgacgcgga ttaagcggat tacacggatt cgcaaatctc caaactggaa
     4081 aaaaccaaaa ccgactccat tggccggcgt gcccgccact tgactggagt ttgcgtcaac
     4141 cgctggatcc gcgtcatccg tggatcgctc ttgtcagttg ttagttgttg gttgttgtga
     4201 aaccagaccc agccggtagc cagtggtcgc cgtgacctga gttgaaaggt tcgaaacaac
     4261 ccgtgtaatc cgcgtcatca ctggattgct tttgttagct cttattgctt cgctccgagc
     4321 cggtgctgca ttctgctgga aaaagcacta gagaattggt gcgggtccca tcgcccagaa
     4381 gaacaacccc agggccgcca gcatggcaat cagggtaccg accaccgcga gggtccattc
     4441 ggccgcgttg accatgcgcg aatggggccg gtgagcccgt tgctccacga ttccccaggt
     4501 gccgatggcg cccgcaccga gcagcagacc ggccagaggc cagcgacgcc aatcgaccag
     4561 gagcaccaga gctgcgccac cgaacccgat tgtcgtgaac agggtcagga gccggagaga
     4621 ggcatgcccg gcccaccggg ttaccgcggc atagaccgac tcggcctcag gctgaaggtc
     4681 tgagttgacc atgggttcaa cctatggtcc tcggtcgtcc gtggaaaggc gaaccgcaaa
     4741 ggctctcctg cactaaatca cctcgaccgg ctgcagctcc ggccgtttgg gatttcggcc
     4801 atcgcccgat gagtgccctc tcaggtgccg ccacacccac ggaagcaggt ggagccggac
     4861 ccaggcgatc tcggcggtga cccattcgag ccgaccgcgc ggcctcaggc ccggcaaggg
     4921 ttgggaccag gattcgtcgc tgccgggaag cccgatggca tgggccagcg ccgcggcaat
     4981 gcggctgtgg cccagcgagt tggcatggag ccggtctcta ctccagagcc gcggatcgga
     5041 ggccaccgga tgcgccgcga catccaccag gatggcaccg ctcattgcgg cggccccgcg
     5101 gagcgcctgg ttcaataccc ggacccgggg tgcgatcacc cggcccagcg gcatcaccgg
     5161 cgtcaggtcc ggcagggtga aggtcagcac ggtcgcaccg gcaccgatca aggcgcgctg
     5221 catccgctcc atgtcgaccg cgaccgaatc ggcgtcaaag cgggcggcca ccacatcgtt
     5281 agttccggag aagatggtcg cgaggttggg tcgcatcgtc agggccggct cgagctgctg
     5341 ttccaggatc tgccgcgtgc gccggccccg gacagccagg ttggcgtaga gcagggaacc
     5401 ctggatggcg ccgatgtgct cggccagccg gttggcccag ccgcgaaagc cgccccgacc
     5461 gtcggggtcg tcgagaccct cggtcgagct gtccccgatc gcgacgtagc gttcaatggg
     5521 catgcgcatg ctgaagtcta gcgacagagc accggggttt gttgctccca tccggtcaaa
     5581 ccgctacgtt gaacggacga tcgagggtgc cgcgtcgggc ggcacctcgc caaccgcggg
     5641 gccgcggtcg ggtcccgaga tgcaggcgct atcccgctcc gaaaggagca gcggacagcg
     5701 cctgtttcgt ttaaccacaa ggaggttgac atggctcgcg atgctcggga ggcggtgaac
     5761 agctacatca ccgatatgct cgcactggag gatgatttcg agaaggcgct gggagcccag
     5821 gtcgcggact tcgagaaaga gcgccccgag gtcgtctcgc agctgcgccg gatacacgat
     5881 ctctgcgagc agcatatcag taacctcaag gatctgagcg agcgccgcgg cggcgggcca
     5941 gcgatgggat tggcggaagc ggtgaaacgg gccggctcga ccctggccgg gatcggcgcc
     6001 gcggccatca ccgtgatgcg gaccgagaag ctgcccaaga acctgcggga tgatttcacg
     6061 gcgctgaatc tgggggccat cggctacacc atgctgtaca ccaccgccat gtcgctggac
     6121 gagccgacgg tcgctgacgt ggcccagcgg cacctgcggg actacgccga ggccgtgatg
     6181 acgctgcata acctgattcc cggcgcggtg atcacgttcc tgcaggagga ggggctggcc
     6241 gccgattccg aggtgctgcc gacagttcac cggacgctcg acgatatctg gcgcagtgtg
     6301 agcgtcacgc cgggcgcgac cttccagccg gggtcgaatc gatagcagtg tcagcgttcg
     6361 gaagggcggg tgtcggggtc gcgacgggca atcctgagcg gcgccggctc ccggcccagg
     6421 tgcttggcct cacgcgggtc agctcggcgc cgagcagcat gatctgacgc cgatcagttc
     6481 cttgcccgcg atgaacagca gcgcagaaac ccgatcgaca acaccaggcc gaacgagcgg
     6541 gcccggtcga gcaggtattc cttcagccgg gaaccgggtg cctgcgtgac cttgaagatc
     6601 gtgttgacgc atgctgcagt tccacgaagg ctccggtcgc cggcccgcaa cgcgggcgtt
     6661 gtgtccggag gtctggctca catcgtctac tggtcaggat gtccgcacac cgctgcgtcc
     6721 cggtccgcgg tgcgattcgc caatcggccc gcgcgttgat ccgctgccta gcatgttgcc
     6781 tcgtatgggg caccggcgcg ccggcgctgc tggcccagga cgccaaggtc aaggtcgaaa
     6841 tcgaaggcat caacggcgat ctggagcgca acgtccgggc ggtgatggaa ttgtcccgcg
     6901 cggccgacaa cggcaagctc tcccggtggc ggatcggaca gctgcaccag cgggccgacg
     6961 aggatatcct ggtcgcgctc gaacccttcg gatactaccg tccccacgtc gacaaattcc
     7021 tggaacgcag cggcgaggag tggatcgccc gctacgtgat cgagccggga ccggcggtga
     7081 tggtgcgctc ggtccgggtg gagctgaccg gacctgccgc cgaggagccg ttctttcgcg
     7141 acgtggcggc cggtttcccg ctcaaggtcg gcgaaccgct gcagcatccg ttgtatgagg
     7201 ccggcaagct cgccctgctg acggcggcca ccgacagcgg ctacctggac gccgacttcg
     7261 ataccagcgc ggtgatcgtc gatcgcgacg ccggcaccgc ggacgtccgg gtgatctttc
     7321 acaccggcga gcggttccat ttcggtccgg tctggttcga ccaggacatc ctggacgacg
     7381 agttcctcca gacccgggtg cccttcgcgc agggtgatct ctggcggcag gaccggctgc
     7441 tgaaactgca gaacacgctg gtcgaggatc cgtactttgc ccgggtggac atcctgccac
     7501 gccgggacag cgcccagggc ctggaggtgc cggtccaggt ttcgctggcc cccaacaagc
     7561 ggctggagta cgagctggga gcggggtacg gcaccgatac cggcccgcga ggccgggccg
     7621 cggggctgtg gcgctgggtc acccgcggag gccatcacgc ccgagccgac atcaccttgt
     7681 cgctggtgga gcagaacgga tccgctcaat acaccaagcc cgcgtttctg accccgaccg
     7741 gcaccctcac tttcgtgggc ggctacgccc agcgcctctt ggagaccagc gattcgcgca
     7801 tcctcaccgg cggcattcgg gtcggccgga agcgattcgg ttggcgcgag cagctttcat
     7861 tctcctggca gcgggaagcc ttcgaggtcg gtcccgatac cggggtcagg tagggcaacc
     7921 agcctggtca tcggcgtgat ctgcggatga gtttgtggtg gggtatccgc cgatgccgct
     7981 gataacgccg atggtttcca acgcgctcga actccaccgg acggatgccg aggttgggca
     8041 atgatcagcg caccgcgatc ggtgcgatga tcggatccgg cagccagtcc tggcggatgg
     8101 tgtacgcctg ggcgctgacc tgccggaacg cttcgatccg catcagcgct tggccatcgt
     8161 cgccgcaggc tcccagggga accgtggctt cgtagccctg acttaacgat gtgacatcag
     8221 cggatgcggc cgtgatgaag acaccattct catagcttcg cactcgcgcg ccgagggtac
     8281 cggaggtcac tttccccagt tcgatcagac agtcgatgcc gagcccgcta tgtcccggat
     8341 ttgcggtggt gtatccggtc gcagcctgtt cgtcggcgtc gaggttgaac accaccagca
     8401 ggctgtctcg atggaatgag ccgggagtga cttcggctcg cagcttgata ttcgagccga
     8461 tcacctcgag ggaggcgaaa atcagatccg cggttccgcc atctcccgag gggtctgcgg
     8521 cctggccgct gaaggagacc gatggaccgc tatcgtcgga tccgcaattg gagaggaaca
     8581 gtgccgtcag gcagcaccag caggtggcgc gcacctcgca cctcatgtcg gttcaggaga
     8641 gagcaggctc agccaatacc gatcatagct ctcccgaacc agagcggtat cccgcccctg
     8701 gatcagcgcc agctcgaacc cgttcaaggc atcggccaac tcctcgagag catctgccat
     8761 ggggagaccc agagccgtag cggctgcttc agccagacgc acgcgatcgg ccgcggtggt
     8821 ggacccggga gcgcgagttg cccggttgga gaccaggccg agccagagtg cggcggtccc
     8881 ccgattcacc tcgtcttcga gcgcagccca gagattgtcc agggcgcgcg ctccagcggc
     8941 cgccagggcc gcgacccgac gctccccgcg gtcggagcgc acccgatccg ccacggcgtt
     9001 gagcagagcg cccttggtcc cgaaatgata gaggaccagc cccttggcac acccagcctt
     9061 ggatgcagcc atttcaactg tccagtcagt caagccattg gtgacaattg tatctatcgt
     9121 cgcttcaagg atttgcttgg tggttactcg ggtcatcggc tcagcaccat tagggagcgc
     9181 ctgatagtat ctgaagaact gaccggacag tcaagaggct ggattgttca tcttgccgtt
     9241 gggtttgccg cgctcacttg ctgtatgcgt ggttacgcct caatatgaaa cccaagcggg
     9301 gagccacccg taactttctg tatgagcgcc gatacccaca ccccgatgcc gtccgtcttc
     9361 tccccgctcg cgaagtccct gctggattcg ttcagcgagg gggtcatcgt cttcgatgcc
     9421 cagggccggg tcatctacct caatcagccg gctcgcgagg ccatggggga caagttcgac
     9481 ctgaccctcc cggctcgaga gctgatgccg ctgctggccc agctgggtgg ccggcttcgt
     9541 cccctccggg tgggtaacct cgagctgggt gaggcgatgt tcctgccctc agtggaaggt
     9601 cccagtaccc tggccgagcg ggagaaggag gccatcgtcc gctcgctcga tgcccatggc
     9661 tggcgtctgg ctgagaccgc ccgcagcctg gggatcagcc gcaccacact ctggcgccga
     9721 ctgcgggcct acggactcca ccgcgatgga cggaaccggt tcgcgcaggc ctcatagtcc
     9781 cacccgtccc acttttcgct gtctccgcat tcccggctga ccatccggct cggcaggccg
     9841 gggcgcgggt gtcttcggtc gagctaccca ggtagcattc ctccatgcac atcaggtatg
     9901 tggtcctgct ggcggcggcg ttcgccggct gcggggagga ggatcccgct ccgggagagc
     9961 tggtggtcga gtgggccggc cacgagcacg gccggtttgt ggcgccgctg gccgccactc
    10021 attgcgccgc gaccggggtg gtggagctga tcgccatccg gggagatacc ggactcgcga
    10081 gcgcgttgtt cctcagtgat tccaccgacc tgcgaaccgg cgactacccc atctttctcg
    10141 ccgcgactgc gcccgagccc cgtccggggg cggtggcagc gctgcgctgg ttcaacctca
    10201 cgtcgatcgt ggcgtacgag ggcttgagcg gcatcgttca cgtggaaccg ggcgaggcgc
    10261 tgctctccgg ccgcttcgac gtgaagctgc aagggatcga ccagcccgat acgctccggg
    10321 ttaccggccg gttcgacgga gttcccctgg cccagggcga cagcacctgc agccgcacca
    10381 tgcgcaggaa cacgctgtag attaccgggg tggagagttc ctacttccga aagggcttcg
    10441 gcctcaagac cgcgatcgaa ccgctgctcg cggcggacta cgccagtcgt gtggtcgatg
    10501 cggtgcgggc ccgaggttac gtgttgcaag cgccgccgct gtcctttcga ctggcgcgcg
    10561 agttcggttt ctgctatggg gtggatcggg cggtagaata cgcttacgag acccgcacca
    10621 agtttcccga ccgccggctc tttctggtag gcgaaatcat tcacaatccc cacgtcaacg
    10681 cgcggttgga ggaaatgggc gtgacgttcc tccgacacgg ggctgacgag gttttcgatt
    10741 tctcgggcct ctccccggac gacgtggtcc tgctcccggc gttcgggata acggtcaccg
    10801 atttccaacg gctgcgcggg atcggctgtg tggtggtcga cacgacctgc ggatcggtgc
    10861 tcaacgtttg gaagcgggtg gagagttatg cccgcgacgg gttcaccgcc atcatccacg
    10921 gcaagtactg gcacgaggag accagggcaa ccgccagcca ggtcaccaaa tatcccaacg
    10981 gcaaattcct ggtcctgctc aacatggacg aggcccgcat ggtgatcgac ttcatggagc
    11041 ggggcggcga tcccgctccg ctggtgggcc ggctggggaa ctcctcctcc cccgactttg
    11101 atttcgtccg cgacctggag cggatcggct tcgccaacca gaccaccatg ctggcgggag
    11161 agtcgctcgc gatcgcggag gagttccggc aggcgatgct gcggcgtcat ggcgccgagg
    11221 ccgccgcggc gcacgtccgc accttcgata ccatctgttc ggccacccag gaacggcagg
    11281 atgcggtcgt caagctgctg gaggatcctc ccgacctgat gctggtgatc ggcgggtaca
    11341 actccagcaa caccacccat ctcgcggcgc tcagcgcggg acggggagtc cggacctatc
    11401 atatcgagga tgccggcgga atcgaccccg aggccgggac catccggcac cagccggttc
    11461 gccagaaacg cgatgtggtc gacggaccgg gatggctggg agacgcgcgg gtcatcggca
    11521 tcaccgccgg cgcttcgacc cccaacaaca agatcggtga ggccatcgcc cgggtgtgcg
    11581 ccaccgcctc catcgatctc gaggcggccc tgcttcggta attcttcggg tctaaccgaa
    11641 atccggatct gacggtacaa tcgtcgcgcc tctgatacgc atgtggaacc gcgatgaccg
    11701 accggattct cctgcggcag cgcctgctgg gcctgccgcg cgtcgttacc cgcaagatgt
    11761 tcggcgccga agcctacttc atcggccccg ccatgttcgc gttcttcacg ccgacggctc
    11821 tggtgctgcg actcccgccg tcggcgctga ccgagtcggt ggcgttaggc gtcgcccgcc
    11881 cgttcctgtc cttcggcgcg gcacaggtga atggatgggc ggagctgacc ctggagggga
    11941 gagcgcccgg cgaactggag aagtggctgc tggccgccca tgcatcgggc acccacgcgg
    12001 cccggagcgc ggcgcgccgg aagcggcccg cccgagcccg gcgaatcgcg aggcgctagt
    12061 cagtcggtca gtcggtcagt cggtcccgtc agtccgtcaa tccgtccgtc cttccgccag
    12121 catccgcgcc accgccgcga tggtgtgcgg cgcgctgcct tcggcccggt tgttcacgat
    12181 gatgtaggcc ggaatccgga gccgccgcgc cgtgttcgcc agccgggcca gatcgcgccg
    12241 caactccggc tgcggatcgc ggatgcggtc atacggcttg aacaggtgga ccgcgtcctg
    12301 gtaggtccgc ccggggcgga gcagcgcgcg
//
LOCUS       DASWKS010000450         3111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2824289, whole genome shotgun sequence.
ACCESSION   DASWKS010000450 DASWKS010000000
VERSION     DASWKS010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2824289"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VGA78_12775"
     CDS             <1..411
                     /locus_tag="VGA78_12775"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HEX9894795.1"
                     /translation="RVGLMRRLLWLTSGVITKMGGGQERMTPLHQDIRETADSYLFYA
                     DQLLDQTQNLQSMHLAVASHRTNEVMRVLTVFSAFFLPLTFIVGVYGMNFDVMPELRS
                     PWGYPLVLGLMAGVSLVIFRWFRRRGWLRRVGGQ"
     gene            428..1831
                     /locus_tag="VGA78_12780"
     CDS             428..1831
                     /locus_tag="VGA78_12780"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX9894796.1"
                     /translation="MDWTLVLVGLALGAVVGWVIARLFTEKVMPPVAPPAPRPQPPVV
                     SDPPELAWIARGNTALGVWLRRSARGNVVGVTDPAVPEAVKNAIAGRLATMAAASVGR
                     TEVERIEEGVIVYIASDDVQLAILLPPKQPFVQAQRDLEGFVGLLRTREMLELASQKP
                     AGSGETVSSVAIRLAMEIEQILDAEVAVAVRRPRGAQVIGASVRADPHLHRVIAVPGS
                     AVDLAVNGEINGMVMAYDPLGVLPPDRRLRERRAFVTPILSRGGQLGAVVVWPPSGLE
                     PTGPARVELEQALRRAGPRFEDAMQRLDLVEQAVRDPLTGLRNRRGMTEAMGAIETER
                     GTLICFDLDRFKSLNDTLGHPAGDAALQTVAGILEELVRDGDTAARVGGEEFAVWLPE
                     ATLEEGLAVAERIRFRIETAQWEWQGRHWPMAASFGVASWPETTRHRDNLLAQADAAL
                     YKAKEHGRNRVEKAVKA"
     gene            2435..2799
                     /gene="ssrA"
                     /locus_tag="VGA78_12785"
     tmRNA           2435..2799
                     /gene="ssrA"
                     /locus_tag="VGA78_12785"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(2916..>3111)
                     /locus_tag="VGA78_12790"
     CDS             complement(2916..>3111)
                     /locus_tag="VGA78_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894797.1"
                     /translation="QWGDEGSYNTAVKKQEVGRGKAKVMKLDTHVEQFTIRPESKGGW
                     TVLVLEWEKTRVVVPLEQSK"
BASE COUNT          519 a          966 c         1075 g          551 t
ORIGIN      
        1 cgggtggggt tgatgcggcg gctgctctgg ttgacctcgg gcgtgatcac caagatgggc
       61 gggggccagg agcgcatgac gccgctgcac caggacattc gcgaaacggc cgacagctat
      121 ctgttctacg ccgatcagct gctggaccag acccagaacc tgcagtcgat gcatctggcg
      181 gtggcctcgc accgtaccaa cgaggtaatg cgggtgctga cggtgttctc ggcgttcttt
      241 cttccgctca cgttcatcgt gggtgtctac gggatgaact tcgacgtgat gcccgagctg
      301 cggtcgccct gggggtatcc tctggtgctc gggctgatgg ccggggtgag cctcgtcatt
      361 ttcagatggt tccggcggcg cggctggttg cgccgggtgg gtggacagtg aaccgggcgg
      421 gtcgctgatg gactggactc tggtgctggt gggtctggca ctcggtgccg tggtgggatg
      481 ggtcatcgcc cgcctgttca cggaaaaagt gatgccgccc gtggcccccc cagcgccccg
      541 gcctcagccg ccggtggtga gcgacccgcc cgagctggcc tggatcgcgc gcggcaacac
      601 cgcgctcggg gtctggctcc gacgcagcgc ccgggggaat gtggtcggcg tgaccgaccc
      661 cgccgtgccg gaggcggtca agaacgccat cgcgggacgg ctggcgacca tggcggccgc
      721 gtcggtgggg cgcaccgagg tcgagcgcat cgaggaaggg gtgatcgtct atatcgcctc
      781 cgacgatgtg cagctcgcca ttctgctccc acccaagcag ccgttcgtcc aggcgcaacg
      841 cgatctggag ggattcgtag ggctcctccg gacccgggag atgctggagc tcgcctccca
      901 gaaaccggcc ggctccggcg aaaccgtcag cagcgtcgcc attcggctgg cgatggagat
      961 cgagcagatc ctggacgcgg aagtcgcggt cgcggtgcgg cgtccccgcg gagcgcaggt
     1021 gatcggggcc tcggtccggg ccgatcccca cctgcaccgg gtcatcgcgg tcccgggctc
     1081 ggccgtggat ctggcggtga acggcgagat caacggcatg gtcatggcct acgacccgtt
     1141 aggcgtgctc ccgcccgacc ggcggctgcg ggagcggcgc gcgttcgtga ccccgattct
     1201 ctcccgcggc gggcaactgg gcgccgtggt ggtgtggccg cccagcggcc tcgagccgac
     1261 cgggccggcc cgggtggagc tggagcaggc gctgcggcgg gccggccccc gcttcgagga
     1321 cgcgatgcag cggctggacc tggtggagca ggcggtgcgc gatcccctga ccgggctccg
     1381 gaaccggcgg ggcatgaccg aggccatggg ggccatcgag accgaacgcg ggaccctgat
     1441 ctgcttcgac ctagaccggt tcaagtccct caacgacacg ctgggccatc cggccggcga
     1501 tgccgcgctg cagacggtgg cgggcattct ggaagagctc gtccgggacg gcgataccgc
     1561 cgcccgggtc ggcggggagg agttcgcggt gtggctgccc gaggccacgt tggaagaagg
     1621 tctggcggtg gcggagcgga tccgattccg gatcgagacc gcccaatggg agtggcaggg
     1681 ccggcactgg ccgatggcgg cgtcgttcgg tgtcgccagt tggcccgaga ccacccgtca
     1741 ccgcgacaac ctgctggcgc aggccgatgc ggcgctgtac aaggcgaagg aacacgggag
     1801 gaatcgggtg gaaaaagcgg tcaaagccta ggtaaagcct agtgccaagg aatcaggact
     1861 aaggtctaag caggactaaa ggtcttggga cttaggacta agtggtttct ggggagggcg
     1921 tcggggttcc acgctgcgcc tcaatccagc aatgactttc gccacctccc gcgatcgggc
     1981 caataactcc tcgtattgct ccaccgtcag cattccggcg tcggaggcgt agtggatcag
     2041 gctccgcacc tcggcggcgg agcctttcgc tatggagagg aactgatgga actcggttcg
     2101 cctcccccgg tcgaagccct cggcgatgtt ggacatcgtt gaagcagccg cggcgcgaat
     2161 ctggtcccgc aatcggaatt cccgattgaa aactcctgtc cgactgaggg tcgagatgtg
     2221 tcgcgccaga tcacgagcac tctgccaggc gatgaggtcc tcgaatacgg ctacgcgagc
     2281 catggaggac gatagtgcgt gatcacgccg ggcaataacc aggaaacggc cccacgaatc
     2341 caagctccgc gctggggggg acttagtcct aagtccttag tcctaagtcc ttgaatatca
     2401 agcgagtggg tgttaagata caacgtaact tctcgggggc gaccggtttc gacgggttag
     2461 ctgaatgcgt ggttgcgcgc ccaggtccaa ggttcctggt taaaccgctt ggaaaaacac
     2521 aactgccaac tctaacttgg cgctggctgc gtaagctgag cttagctcgc tgacgcacca
     2581 ccggtgaacg aagcccgcct ggggcgtcgc caccgggtcg aaaagccggg ctggcctgcc
     2641 gtggacctcc cgacacggcg ggtgagaact cagggagtcg gtggtgggaa gtctggccgg
     2701 ttgacggccc actgctcagg taagaagatc ggcctacgcg cgtagatact gcgaaggatg
     2761 ctgattcgga ccagggttcg attccctgcg cctccactgc tggtcgaaga cggtcgaagc
     2821 aagtcgaagg cggtcgaagc cggtgaccct ttccgctgct tcgaccgcct ttcgttttcc
     2881 cacaccgtct tcgacctgct tcgaccccct tcgacctact tcgactgctc caggggaaca
     2941 accacccggg ttttttccca ctcgagaacc aggaccgtcc agcccccctt cgattcggga
     3001 cggatggtga actgctcgac atgggtgtcc agcttcatca ccttcgcctt gccgcggccg
     3061 acttcctgtt tcttgaccgc cgtgttgtag gacccttcat cgccccactg c
//
LOCUS       DASWKS010000451         9956 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2094557, whole genome shotgun sequence.
ACCESSION   DASWKS010000451 DASWKS010000000
VERSION     DASWKS010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9956
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2094557"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VGA78_12795"
     CDS             complement(<1..301)
                     /locus_tag="VGA78_12795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894798.1"
                     /translation="MRLVALLLVLWLVAAPFASAQPARSQPIERARLGFLVGEFQGEV
                     QLFPGEGAPTITAPMHYRGAWELDSAWVVARYEQSPGGRTLRGMLLYTWEAKPGRY"
     gene            complement(344..853)
                     /locus_tag="VGA78_12800"
     CDS             complement(344..853)
                     /locus_tag="VGA78_12800"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9894799.1"
                     /translation="MSKVIEKSVFFPHPPEAVWVALTDKQALAEWLMPNDFEPRVGHR
                     FRFMVDPGPGFSGVSECEVTEADPPRRLVYTWVVVPKDPAKPKPPPMTLTWTLAPEGR
                     GTRLRLYQTGAEVLNWWWRFSMNHGWTRMLEKLLPRVLGNVRDGRFTPGAIRKRDYGT
                     RTVPAGFAK"
     gene            complement(850..1179)
                     /locus_tag="VGA78_12805"
     CDS             complement(850..1179)
                     /locus_tag="VGA78_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9894800.1"
                     /translation="MPRTSAAETVFHAIADPTRRELLLRLGRGERSAGDLSSPFKMSQ
                     PALSQHLRVLREAGLVRQRRDGRHQIYSLEPGPLREVFDFARFFERFWDRKLDALGKY
                     LDRRVTP"
     gene            complement(1241..1879)
                     /locus_tag="VGA78_12810"
     CDS             complement(1241..1879)
                     /locus_tag="VGA78_12810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894801.1"
                     /translation="MLPSLLAALPDFALGLLCVTAWVAPEWIGVQWIRYVVLLMLMEF
                     IVIHSSGFMGAAVWGSARKAPRGLVILGFGAFYTLFVGGFALVFKTWAPLVGFWVLTL
                     NRLLGAVVGQADGKEKALVMRGWAACTLFYLLVVFATTLLPVPRLGVTPEIAIAANIP
                     GDSGLWVTRPYTVLAAGFVYFTACAVSELSGHRWLPISVEGSRRGSKAVEGV"
     gene            2020..2790
                     /locus_tag="VGA78_12815"
     CDS             2020..2790
                     /locus_tag="VGA78_12815"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9894802.1"
                     /translation="MLAAHRRLPIALIGAATLGLFGDALAVQDPRKSEIRGTVIRAND
                     RVPMSGARVSLDGTELTLTTDDKGRFKFPKVAAGQYIIRAEVEGFPVATSTLLLAQGD
                     RLDVEFLVGATESVMLPELKVTADAPRISPVAEFNRRATSGNGRYFHRDYIEKRRAAN
                     LMDLLRGTPGMRVECPRNERTGCRLRMSRSPRNCGPGYFLDGIPSDPSVLFLTSPNDV
                     EGIEVYSGPSETPPELEGVRSQCGAVAIWTRVGRRPGG"
     gene            2931..4235
                     /locus_tag="VGA78_12820"
     CDS             2931..4235
                     /locus_tag="VGA78_12820"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HEX9894803.1"
                     /translation="MTEPGGRGMALHSKILIGLVLGAVGGTVSNLVFKGTPQLMWVVD
                     NVLQPIGQVFLRMLFMVVIPLVFTSVTLGVASLGDPRRIGRIGLKTLGFFLITTALAA
                     AIGLLMVNLIQPGNAIDETTRTALMTEFSAQAGERVQQASASRFGIDTFVNIVTRNPV
                     KSAADGDMLGLIFFSLVFGLALTLLPIERSDPVMKLLDGVAGAVMVIIGFAMKLAPIG
                     VFGLIFTVTAKFGWQFLQSLLLYVVTVLAGLLLHQFFIIPLLARTVANVGPGEFFRGV
                     RELVVTAFSTSSSNATLPTTIKTATRNFGVPKEIAGFVLPLGATMNMNGTALFEGMTV
                     LFLAQVFGVTLGLPTQIIVVVMAVITAVGVAGVPSGSIPLLVMVLGMVGVPGEGIALI
                     LGVDRILDMCRTVPNVTGDLLTSLWITKSEGLKRTPLEERAA"
     gene            complement(4258..5364)
                     /gene="tal"
                     /locus_tag="VGA78_12825"
     CDS             complement(4258..5364)
                     /gene="tal"
                     /locus_tag="VGA78_12825"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002881.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX9894804.1"
                     /translation="MSRNPLVRLGELGQSPWYDYITRELVTGGGVERMITDDGLLGMT
                     SNPTIFEKAVSGSSLYDRDIRSLTTLGLPPKEIFEAIAVTDVQSACDEFQPIHERTGA
                     GDGLVSLEVDPALAHDTAATIAEASRLWSSLNRPNAMIKIPGTLEGLPAITRSLADGI
                     NVNVTLLFAVSRYLQVIDAFMAGLEDRVARGLPVDRIASVASFFVSRLDSKIDPWLDA
                     RGGLDQLRGTAAIANACDAYAAFERATATPRWHALAAAGARMQRPLWASTSTKDPKYP
                     DVYYVEALIAPYTVNTLPPATFDAYRDHGQPETRIREGMAQAPAQLAALHEAGINLDD
                     VTATLEREGVESFAKSYTQLLAGIEAKAGELVGR"
     gene            complement(5361..7388)
                     /gene="tkt"
                     /locus_tag="VGA78_12830"
     CDS             complement(5361..7388)
                     /gene="tkt"
                     /locus_tag="VGA78_12830"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX9894805.1"
                     /translation="MPPAAPDAPIHETAWLSINAIRVLAMEAVEQAQSGHPGTPMALA
                     PAAYVLWTRHLKHHPAAPRWADRDRFVLSCGHASMLLYGLLHLTGYDLPIEEIRAFRQ
                     WGSLTPGHPERGHTPGVETTTGPLGQGFGNAVGMALAERLLADRFNRPGHEVVDHHTW
                     VFASDGDMMEGVASEAASLAGHLGLGRLTVLYDDNRITIDGSTALSFSEDVGQRYEAY
                     GWQVQHLPDGNDLDAIDRALATAAAETTRPSLIVLRTVIGDPAPTRKNTAKAHGEPLG
                     KDEVAATKRILGWPSQPFYVPDEALADMRSCLDRGAAWQRDWDERFAAYANAYPEQAI
                     QFRDTMAGQLPSNWDERLPAFPAEGGLATRQASQQILSALVQSVPALAGGSADLAGST
                     GVNLKHGGEFTAATVGRTFHWGVREHAMGAVMNGLAAHGGVRPYGSTFLCFADYMKPS
                     IRLAALMGLPVIYLFTHDSIGLGEDGPTHQPIEHLTMLRSIPNLTLIRPADAAETAEA
                     WRMALEKHTGPTAIVLTRQKLPLLDHTRLAGATGARRGGYVLYEPLGGPQAIVIATGS
                     EVHIALEAARELGRDRVRVRVVSLPAWDVFGEQPEAWRDQVLPPRIRARVSVEAGSDF
                     GWLRWVTEEGESIAINRFGASAPGERLFQEFGFTPERVADAVRRVLARRTA"
     gene            7785..8132
                     /locus_tag="VGA78_12835"
     CDS             7785..8132
                     /locus_tag="VGA78_12835"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HEX9894806.1"
                     /translation="MLRKSGGRSYSKHREWLLEQHGPVCAYCGNKTRPERITLDHVRP
                     RRGQTAYDRPDNLVLACSECNAQKADTPFLAFLLARRSRGVYLLHYGDHLSEPIKEMA
                     RQASERPVLPSDN"
     gene            complement(8221..>9956)
                     /locus_tag="VGA78_12840"
     CDS             complement(8221..>9956)
                     /locus_tag="VGA78_12840"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9894807.1"
                     /translation="AELTTAYRAEIASDPDRNQNSTFNLHPVIAGKGPEAPRSTQVTI
                     WLAAVSVVVLLITCANVANLLLARGARRQREIAVRLALGSRRRRLVAELLLEVIILAV
                     AGGVLALLVAYWGGAAIRSFLLPDIDWVGSPLDGRVAAVTWLATLLTIVVAGLVPAIH
                     GSRPDLNQSLKSGSQASGRDPRQARLRRTLLVAQTALSVVLLMGAGLFVQSLRNVVDL
                     DFGFEPRGLLVATADVAGSGLTREQRAQLATRLLEEVRRFPGVTSASLGMAIPFQTRY
                     STRLRLPDRDSVPRLPTGNPSYNVISPEFFATTGMRLVVGRTFSATDAEGSAPVMIVN
                     ETMARTYWPGEPAVGHCVMIGDDSVPPCAEVVGVVEDSRRAELREDPIMQYFVPVTQA
                     SGLGMSFDRTLYLKVAGSTDQMVEPIRRAMISAAPEVAWANVTPMESFLEPHLQPWRL
                     GASMFGIFGLLALIVAAVGLYGVMAYSVATRTREFGVRGALGASAGTIAGQVLSEGLR
                     LTLLGLVIGGVAALGGAGLIASLLFDTSPRDPVVFATVTGALLLAAGVASLLPAVRAA
                     RIAPADALRTE"
BASE COUNT         1688 a         3314 c         3269 g         1685 t
ORIGIN      
        1 ggtaacggcc cggcttggct tcccaggtgt aaaggagcat gccgcggagg gtccggcctc
       61 cgggcgattg ctcgtagcgg gccaccaccc acgcactgtc cagctcccac gcgccacggt
      121 agtgcatagg cgctgtaatc gtgggggctc cttccccggg aaacagctgc acctcaccct
      181 ggaactcgcc gaccaggaag cccaggcggg cgcgctcgat cggctgggag cgggcgggct
      241 gggccgatgc gaatggggcc gcgacgagcc agagcacgag caacagggca accaatctca
      301 taggtacctc cggggtcggg ggacgatccg ttgggagcgc gggctacttg gcgaagccgg
      361 ccggcaccgt gcgggtgccg tagtcccgtt tccgaatcgc acccggtgtg aaacgtccgt
      421 cccggacatt gcccagcacc cggggcagca gcttctcgag catgcgagtc cagccgtgat
      481 tcatggagaa gcgccaccac cagttgagca cctcggcccc ggtctggtac agccggagcc
      541 tggtgccgcg gccttcgggg gcgagggtcc aggtcagggt catcggcggg ggcttgggtt
      601 tggcggggtc cttgggcacc acgacccagg tgtagaccag ccggcggggc gggtcggctt
      661 cggtcacctc acactcgctc actccgctga agcccggacc gggatcgacc atgaagcgga
      721 agcgatgccc cacccgcggc tcgaaatcgt taggcatcag ccactcggcg agtgcctgtt
      781 tgtcggtgag cgccacccac acggcttcgg gcggatgggg aaagaacacg ctcttctcga
      841 tcaccttgct cacggggtca ccctccggtc gaggtacttc ccgagcgcgt ccagcttccg
      901 atcccagaac cgctcgaaga agcgggcaaa gtcgaatacc tcccgcagcg gaccgggttc
      961 cagagagtag atctggtgcc ggccgtcccg gcgctgccgc accaggccgg cctcccgcag
     1021 tactcggaga tgctgggaca gggccggctg gctcatcttg aacggcgaac tcaggtcgcc
     1081 ggcgctgcgt tccccccggc cgagccgaag caacagctca cgccgggtgg ggtcggcgat
     1141 ggcgtgaaac acggtctcgg cagcggacgt gcggggcata gatcaatgta taagctattg
     1201 cttaaatgtc aacaaacctg agcccgtcac gccacgacgt tcacacccct tcgaccgcct
     1261 tcgaccccct tcgactgcct tcgactgata tgggcagcca gcgatgacca ctcaactccg
     1321 acacggcgca ggcggtgaaa tacacgaacc cggccgcgag caccgtgtag ggccgggtga
     1381 cccagagtcc gctgtcaccg gggatgttcg ccgcgatggc gatctcgggg gtgaccccca
     1441 gccgaggcac cggcaacagc gtggtcgcga ataccacgag gaggtagaac agggtgcacg
     1501 ccgcccagcc ccgcatcacc agcgccttct cttttccgtc cgcctgacca actaccgccc
     1561 caagcaaccg attgagggtg agcacccaga agcccaccag cggagcccag gtcttgaaca
     1621 ccagagcgaa cccaccgacg aacaaggtgt agaatgcccc gaaacccagg atcaccagtc
     1681 cccggggtgc cttccgggca cttccccaga ccgcggcacc catgaatccc gacgaatgga
     1741 tgacgatgaa ttccatcagc atcagcagga ccacgtagcg gatccactgg actccgatcc
     1801 attccggcgc cacccacgcg gtcacacaga gcaggccgag ggcgaaatcg ggcaacgccg
     1861 caagcaggga gggaagcaaa gggtcacctc cggcatggga agcgtatcgt ccgtcggtcc
     1921 gtgcgcccgt ccgctcctga aacgtctggt tgctatatgg agtaacaata cctatatcac
     1981 tcttgaccct cttcggttgg cgccacggtc gcgcccccca tgctggcagc ccatcgtcgt
     2041 cttcccattg ccctgatcgg ggcggccaca ctcggcttat tcggcgacgc gctggccgtt
     2101 caggacccca ggaagtccga aatccgcggg acggtcatcc gggccaacga ccgagttccc
     2161 atgtccggcg ccagggtgtc gctcgatggc accgagctga ccctgacgac cgacgataag
     2221 ggccgcttca agttcccgaa ggtggcggcc ggccagtaca tcatccgcgc cgaggtggaa
     2281 ggattcccgg tcgccacttc cacgttgctg ctggcgcagg gcgaccggct cgatgtggag
     2341 ttcctggtcg gcgccaccga aagcgtgatg ctccccgaac tcaaggtcac ggcggatgcc
     2401 ccccggatca gcccggtggc cgagttcaac cggcgggcca cttccggtaa tggccgctac
     2461 ttccaccgcg attacatcga gaagcggcgg gcagccaact tgatggacct gttgcgcggc
     2521 actcccggca tgcgggtgga gtgtccccgt aacgaacgca ccggatgccg gcttcggatg
     2581 tcgcggtcgc ctcgaaactg cgggccgggc tatttcctcg acggcattcc ctcggacccg
     2641 tcggtgctgt ttctgaccag tcccaatgac gttgaaggga tcgaagtcta ctccggcccg
     2701 tccgagacgc cccccgagct cgaaggggtg cgctcccagt gcggggcggt ggcgatctgg
     2761 acccgggtgg gccgaagacc gggaggctga tcggtcgctg gcattccggg aaacctgaag
     2821 ccatcttttc tcgcggccgc tgggctttgt tgccggcggc cgcatcgtgt atccgcccca
     2881 tttcccaccc agtcccgccc ggtgcgggca tcatccagga gtaaggtgac gtgaccgaac
     2941 caggcggccg cggcatggcg ctgcatagca agatcctgat cgggctggtg ctgggcgccg
     3001 tcggggggac ggtgtccaat ctggtcttca agggcacgcc ccagttgatg tgggtggtgg
     3061 acaatgtgct gcagccgatc ggtcaggtct ttctgcggat gttgttcatg gtggtgattc
     3121 cgctggtctt cacctccgtc acgttaggcg tggcgtctct gggcgatccc cgccggatcg
     3181 gccggatcgg gctcaagacc ctgggtttct ttctcatcac cacggcgctg gccgcggcca
     3241 tcggtctgct gatggtgaac ctgatccagc ccggcaacgc catcgacgag accacgcgaa
     3301 ccgcgctcat gaccgagttc tcggcccagg ccggcgagcg ggtgcagcag gcctccgcgt
     3361 cgcggttcgg catcgacact ttcgtcaaca tcgtcacccg gaaccccgtc aagtcggccg
     3421 ccgacgggga catgctgggc ctgatcttct tctccctggt cttcggcctg gcgctcaccc
     3481 tgctcccgat cgagcgatcc gacccggtca tgaagctgct cgatggagtc gccggtgcgg
     3541 tgatggtcat catcggcttt gcgatgaaac tcgctcccat cggcgtcttc gggctgatat
     3601 tcacggtcac ggccaagttc ggctggcagt ttctgcagtc gctgctgctc tacgtggtca
     3661 ccgtcctggc cggcctgctc ctccatcaat tcttcatcat ccctctgctg gcgcgcacgg
     3721 tggcgaatgt ggggccgggc gagttcttcc ggggtgtccg ggagctggtg gtgaccgcct
     3781 tttccacctc gtcctccaac gcgacgcttc cgaccaccat caagaccgcc acccgcaact
     3841 tcggtgtgcc gaaggagatc gccggcttcg tgctcccgct cggcgccacc atgaacatga
     3901 acggcaccgc cttgttcgag ggaatgacgg tgctctttct ggctcaggtc ttcggggtca
     3961 ctctgggcct gcccacccag atcatcgtgg tggtcatggc ggtcatcacc gcggtcgggg
     4021 tggcgggagt ccccagcggg tcgatccccc tgctggtgat ggtgctgggc atggtgggcg
     4081 tgcccggtga gggcattgcg ctgatcctgg gtgtggaccg gatcctggat atgtgccgca
     4141 cggtgccgaa tgtgacaggg gacctgctga cctcgctctg gatcacgaag agcgaaggac
     4201 tgaagcgaac gccgctggag gagcgggccg cctaattgca tggtcttcga ccggcagtta
     4261 ccgccccacc agctcccccg ccttcgcttc gatgcctgcc aacagctggg tgtaggactt
     4321 ggcgaagctc tctacccctt cccgctccag ggtcgcggtc acgtcgtcca ggttgatgcc
     4381 ggcctcatgt aaggcagcga gctgggcagg cgcctgagcc attccttccc ggattcgggt
     4441 ctccggctgg ccgtgatcgc ggtacgcgtc gaaggtcgcc ggcggaagag tgttcacggt
     4501 atagggtgcg atcagggctt cgacgtaata cacgtcgggg tacttgggat ccttggtgct
     4561 ggtggaggcc cagagaggcc gttgcatccg ggcgcccgcg gccgccaggg cgtgccaacg
     4621 cggtgtcgca gtggcccgct cgaacgcggc gtaggcgtcg cacgcgttgg cgatcgccgc
     4681 ggtgccccgg agctggtcca gcccgccgcg ggcgtccagc cacgggtcga tcttgctgtc
     4741 gagccggctc acgaagaagc tcgccaccga ggcgatccgg tccaccggca gtcctcgcgc
     4801 cacccggtcc tccagacccg ccatgaaggc gtcgatcact tgcagatagc gtgacacggc
     4861 gaacaacagc gtcacgttca cgttgatgcc gtccgccagg gagcgggtga tggccggcag
     4921 cccttccagg gtgccgggga tcttgatcat ggcattcggc cggttgagtg agctccacaa
     4981 ccggctggct tcggcgatgg tcgcggcggt gtcgtgcgcc agggccggat ccacttccag
     5041 cgacaccaat ccgtcgccag cgccggtgcg ctcgtggatc ggctggaatt cgtcgcaggc
     5101 cgactggacg tcggtgaccg cgatggcctc gaagatctcc ttgggcggca ggcccagcgt
     5161 ggtaaggctc cggatgtcgc ggtcgtagag cgagctgccg gagaccgcct tctcgaagat
     5221 ggtgggattc gacgtcatgc ccagcaggcc atcatcggtg atcatccgtt ccaccccgcc
     5281 gccggtcacc agctcccggg tgatgtagtc gtaccagggg ctctgtccca gctcgcccag
     5341 cctcaccagc ggattgcggc tcatgcggtc ctccttgcga gcacccgacg caccgcgtcg
     5401 gccacgcgct ccggggtaaa tccgaattcc tggaagagcc gctcgcctgg tgccgaggcg
     5461 ccgaaccggt tgatggcgat cgactcgccc tcttccgtga cccaccgaag ccacccgaag
     5521 tcactccctg cttccaccga cacccgggcc cggatccggg gcggcaggac ctggtcccgc
     5581 caggcctccg gctgttcgcc gaacacgtcc cacgccggga gggacactac ccgtacccgg
     5641 accctgtccc ggcccagctc ccgggcggcc tcgagcgcga tgtggacctc cgacccggtc
     5701 gcgatcacaa tcgcctgggg accaccgagc ggctcgtata gaacgtaacc gccgcggcgg
     5761 gcgcctgtgg cgccggccag cctggtatga tcgagcaagg gcagcttctg tcgagtcagg
     5821 acgatcgcgg tcggtccggt gtgcttctcc agtgccatgc gccaggcctc ggcggtctcc
     5881 gcggcgtcgg ccggccggat cagggtgagg ttgggaatcg accggagcat ggtgaggtgc
     5941 tcgatcggct gatgggtggg cccatcttct cccaggccaa tggagtcgtg ggtgaagagg
     6001 tagatcaccg gcaggcccat gagcgccgcg agccggatcg agggcttcat ataatcggcg
     6061 aagcagagga aggtgctgcc ataggggcgc actcctccat gagcagccag gccgttcatc
     6121 accgcgccca tcgcatgctc ccggacgccc cagtggaagg tccgtcccac cgtggccgcg
     6181 gtgaattctc caccgtgctt gaggttgaca ccggtgctcc cggccaggtc ggcggagccg
     6241 ccggccagcg ccggaaccga ctgcaccagc gcgctcagga tctgctgcga ggcctggcgg
     6301 gtcgccagcc cgccctccgc tggaaaggct gggagtcgtt cgtcccagtt cgacggcagt
     6361 tgcccggcca tggtgtcgcg gaactggatt gcctgctcag ggtaggcatt cgcgtaagcg
     6421 gcgaaccgtt cgtcccagtc gcgctgccag gccgcgcccc ggtcaaggca cgagcgcatg
     6481 tcagccagag cctcatcggg cacgtagaaa ggctgcgagg gccagcccag gatccgcttg
     6541 gtggcggcca cttcgtcctt gccgagcggc tccccgtggg ctttggcggt gttcttccgg
     6601 gtgggagcgg ggtccccgat cacggtgcgc agtacgatga gcgaggggcg ggtggtttcg
     6661 gctgcggccg tggcgagcgc gcgatcgata gcatcgagat cgttgccgtc gggcaggtgt
     6721 tgcacctgcc agccgtaggc ctcgtagcgc tggcccacgt cttccgaaaa cgagagggcg
     6781 gtggagccgt cgatagtgat ccggttgtcg tcgtagagca ccgtcaagcg gcccaggccc
     6841 aggtggccgg ccagcgacgc cgcctcgctc gcaaccccct ccatcatgtc cccatcgctg
     6901 gcgaacaccc aggtatggtg atccacgacc tcgtgtcccg gccgattgaa tcgatcggcc
     6961 agcaaccgtt cggcgagcgc catccccacc gcgttgccga agccctgacc cagcgggccg
     7021 gtggtggtct ctactccggg ggtgtgaccg cgttccggat ggcccggcgt cagggagccc
     7081 cactgacgaa aggcccggat ctcctcgatc ggcaggtcat agccggtgag atgcagcaac
     7141 ccgtacagga gcatcgaggc gtgaccacag gacagcacga agcgatcccg atcagcccag
     7201 cgcggcgcgg cgggatgatg tttgaggtgc cgggtccaga ggacataggc ggccggcgcc
     7261 agggccatgg gcgtgcccgg gtggcccgac tgggcctgct ccacggcttc catcgcaagg
     7321 acgcggatcg cattgatgga gagccaggca gtttcgtgaa tgggtgcgtc gggagcggcc
     7381 gggggcacag gaaaggtggt caggtccgcc tccgcggcag agatcgattg gtgagggatc
     7441 gaggcgtcgc gcgctgacgg gaaagaaaag taacctctca atctggttcg cggatcgctg
     7501 cttctggtgg ccgataatcg gccaggccag tgttgaccgg aatctgtaag tcgttgtttt
     7561 acaagggagt ctgatggtgt gcctagccta gaagggtttc aggcactact tttgatgtct
     7621 gtaagccaca acccggcaat caggccggac ggctttgact ctcaaactgg atgtttgtgt
     7681 ctagtagttc caacggttca agtaacggca acggtaacgg taacggccac cgcaagcgcc
     7741 accgcaacgg cctcagtaac ggtcgtacca cttccgcttc atctgtgctc cgcaagtccg
     7801 gcggtcgatc ctattcaaag catcgcgagt ggttgctgga acagcacggc ccggtgtgcg
     7861 cctactgcgg caacaagacc aggccggagc ggatcacgct cgatcatgtg cggcctcgcc
     7921 gggggcagac ggcgtacgac cggcccgaca acctggtgct ggcctgttcc gagtgcaacg
     7981 cccagaaggc agatacgcca ttccttgcgt tcctgctggc gcggcggtcg cgaggtgtct
     8041 acctcctgca ttacggcgac catttatcgg agccgatcaa ggaaatggcg cgtcaggcca
     8101 gcgaacgacc ggttctccct tccgacaact gacttctgat cattgacgat tgacgattga
     8161 cgattgctat cagcgatcgt cgctccccgc aatcgacaat cgtcaatcgt caataggctg
     8221 ctactccgtc ctcagggcat ccgccggggc aattctcgcc gcgcgcaccg caggcagcag
     8281 gctggccacc cccgccgcca gcagcagtgc ccccgtcacc gtggcgaaga ccacgggatc
     8341 tcggggtgag gtgtcgaaca gcagcgacgc gatcagtccg gctccaccca gtgccgccac
     8401 ccctccgatc accagcccca gcaacgtcag gcgcagtcct tcgctgagca cctgcccggc
     8461 aatggtgccc gcgctcgcgc ccagtgcgcc ccgcactccg aactcgcggg tacgggtcgc
     8521 caccgagtag gccatcaccc cgtagaggcc taccgcggcc acgatcaacg cgagcaaccc
     8581 gaagatgccg aacatggagg cgcccagccg ccacggctgc aggtgtggct ccaggaacga
     8641 ctccatcggt gtcacgttgg cccaggctac ctcgggggcg gcgctgatca tggcgcgccg
     8701 aatgggctcg accatctggt ccgtgctccc ggccaccttg agatacaggg tccggtcgaa
     8761 ggacatcccc agccccgacg cctgggtcac cgggacgaag tactgcatga tgggatcctc
     8821 ccgcagctcg gcgcgccgcg aatcctccac cacccccacg acttcagcgc agggcggcac
     8881 cgaatcatcg ccgatcatca cgcagtgacc cacggccggt tccccaggcc agtaggttcg
     8941 cgccatggtt tcgttcacga tcatgacggg agcgctgccc tcggcatcgg tggcggagaa
     9001 ggtccggccc accaccaacc gcatcccggt tgtcgcaaag aactccggcg agatgacgtt
     9061 gtagctcggg ttcccggttg gcagccgggg cacgctgtct cggtcgggca ggcgcagcct
     9121 ggtcgagtag cgggtctgga acgggatggc catcccaagg ctggccgatg tgacgccggg
     9181 gaaccggcgg acttcctcca ggagccgggt cgccagctgg gcgcgctgct ctcgagtcag
     9241 gcccgatccg gcgacatccg cggtcgccac cagtaacccg cgcggttcga agccgaagtc
     9301 caggtccacc acgttgcgaa ggctctggac gaagaggccg gcgcccatca gcaacaccac
     9361 cgaaagggcc gtctgagcca ccagcagggt ccggcgcaac cgggcctggc ggggatcgcg
     9421 accggatgcc tgcgagccgg acttgagcga ttggttcaga tcgggccggc tgccgtgaat
     9481 ggctggaacc aggccggcga ccacgatggt gagcagcgtg gccagccagg tgactgccgc
     9541 cactcggccg tccagtgggg aacccaccca atcgatgtcg ggaaggagga agctgcggat
     9601 agcggccccg ccccaatagg ccaccaggag cgccagcacg ccgcccgcca ctgcgaggat
     9661 gattacctcc agcaggagct cggctaccag ccttctccgt cgacttccca gcgccaggcg
     9721 cacggcgatc tcgcgctgtc gccgggcgcc acgggccagg agcagattgg ccacgttggc
     9781 acaggtgatg agcagcacga cgaccgacac tgccgcgagc cagatggtga cttgcgtgct
     9841 tcgaggcgct tcaggaccct tcccggcaat taccgggtgc aggttgaagg tcgaattctg
     9901 attgcggtcc ggatcggacg cgatctctgc ccggtacgcg gtcgtgagct ccgctg
//
LOCUS       DASWKS010000452        10068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1337129, whole genome shotgun sequence.
ACCESSION   DASWKS010000452 DASWKS010000000
VERSION     DASWKS010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337129"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1016
                     /locus_tag="VGA78_12845"
     CDS             84..1016
                     /locus_tag="VGA78_12845"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HEX9894808.1"
                     /translation="MDLPPPALDTATFTEHVVETGLGRRRYRLFVPGRTDGGDPLPLL
                     VVLHGCTQDAADIARGTRFNQHAERQGMLVLYPEQPIEANPQKCWNWFLPAHQGRDSG
                     EPALVAYLTRRVMAEYPVDSGRIYLVGVSAGGAMAVLTAIAYPEIYTALGVHSGIGYR
                     AAENLASALTAMKGEGSPPGELAREAHAAMGDRARAVPIMVVQGQLDPAVNAGNAQRI
                     SEQFVTLAVMAGSGPAPPETDGFTSGGREVTRTVWLTADGPALVEQWIIEGLAHAWSG
                     GSPDGTWTDPAGPDASAEMIRFLLSHRLQGPSKR"
     gene            1013..2521
                     /locus_tag="VGA78_12850"
     CDS             1013..2521
                     /locus_tag="VGA78_12850"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9894809.1"
                     /translation="MNGRILFPVRPDPIRDWAGYAPDRIALVDRARDLRQSYRELDRA
                     ISRWTGLLSNLGVELGHRVAVLAGNRPEVVALLFACHRLGAALVPLNWRLPAAELSPI
                     LHNAEVALLVYEGTFRTTLEAASAGLDRPPRVVDLDAATRLLTDDEARSVSIEPETPA
                     LVLYTSGTTGKPKGAVLPHRQLFYNAVATATAWELTAADVGPISTPFFHTGGWNVFAL
                     PVWHRGGRVVLFEKFEPSEFLVGMAEEGCTVALTVPTQLVMLLECSEWGRPVPSLRAF
                     WAGGAPCPLSVQERVRAAGYGLREGYGLTECGPNCFVASDDEARRRPGWVGRPMLFLS
                     MRLVHEDDSPVGEGEPGELQLRGPQVFSGYLHDPARSAEAFTADGWLRTGDLAQRSSD
                     GCYRICGRRKEMFISGGENVFPAEVEAALADHPGVVEVAVIGVPDARWGEVGRAFVVP
                     RAGSRLAEATVVEHARQRLAGYKVPKSVVLLPALPRLGSGKVDRGALQGLGE"
     gene            2518..3087
                     /locus_tag="VGA78_12855"
     CDS             2518..3087
                     /locus_tag="VGA78_12855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894810.1"
                     /translation="MTRLTGPVAKGSTFVATLEFLREAGGPALHDRVLRGLGPADRKA
                     IRGLTPTSEAPFPLLLRLWRSADAELASRDPGWIERAGAFSIASGGKRLYGGILQKES
                     PLQFLTQSVSLFRLFYHPGDMEVVEEGPDRAVLRLVGFPPTDRLFCRRQTGGLQSALT
                     IAGGSEPSVRHVRCELEGDAFCEWELRWR"
     gene            complement(3102..3953)
                     /locus_tag="VGA78_12860"
     CDS             complement(3102..3953)
                     /locus_tag="VGA78_12860"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9894811.1"
                     /translation="MTPPQELMLAAGQVRLNVLDYAGNSPPLILLHGLSANGHHFDGL
                     AAAGLAPGHRLIAPDLRGRGRSDKPAAGYGMADHAADILGLLDQLRIDRATVGGHSFG
                     ALLSLYLASQHPDRVTRVVMLDAAATLHHDVRALIAPSLARLAQRYPSADAYIALVRS
                     MPFLGGFWHPLLEGAFRAELEPLPDGQVAVRTSAGAIAEALDRALGEPWEDHVARVNQ
                     PMLLVRAPEGYGPPGTPPILPEDDARATVRALRHCRYVETTGNHLTMLFGENGRRTAE
                     AILEFLN"
     gene            complement(3950..5494)
                     /locus_tag="VGA78_12865"
     CDS             complement(3950..5494)
                     /locus_tag="VGA78_12865"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX9894812.1"
                     /translation="MTLHLAALLDRHAQSRSDHTAVVFGNQRLSFRELHSLVGRVGHS
                     LLSLGLRAGDKVALLLPNCLEQLGVYWASARLGIVTVPLSPLLRGSGLAALVRDCDAR
                     AVISTGELRPVLDAVRADLSHIPADNWLMVGDSDSPGYRSLSRLMQGMSAGPLPLPSL
                     TGEEPFNIIYSSGTTGQPKGIVLPHRVRATYGLLFAAAFRIAPESVVLHAGSLVFNGA
                     FVTLMPACLMGCTYVLEPRFDPDGFLETIEREGVTHAMMVPSQIVALMQSSRWQATDL
                     SSLRMICSVGAPFHREHKDRFAQRLPGVFHELYGLTEGFVTILDRDDFARRPDSVGIA
                     PPLFEMRIVDDQGRDVPPGQVGEIAGRGPILMSGYYKRPDLTSQAIRDGWLLSGDLGY
                     RDDAGFLYLVDRKKDLIISGGVNVFPKDIEEVAVRHPGVREVAVFGVPDSKWGEAPVA
                     AVILREAGVVSAEVLRDWINDRVEARYQQVREVLLLEDFPRSSAGKTLKRVMREQFWA
                     GQGSKI"
     gene            5568..6029
                     /locus_tag="VGA78_12870"
     CDS             5568..6029
                     /locus_tag="VGA78_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9894813.1"
                     /translation="MKLTINGVARDVDVPPAMPLLWVLRDVLGLTGTKYGCGMALCGA
                     CTVHLDGNPIRSCSTPVSAAEGKAVRTIEGLAQNDRDHPVQQAWAEVNVPQCGYCQAG
                     QLMSAAALLERSPRPSAEEIDSFMAGNLCRCGTYLRIRQAVQRAAEIKAGR"
     gene            6032..8215
                     /locus_tag="VGA78_12875"
     CDS             6032..8215
                     /locus_tag="VGA78_12875"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX9894814.1"
                     /translation="MAAIPFTRRDFLRVSAVGGGLLLGVPFESACGLIGGQSAGPRPD
                     VWVKLDPDDSITITVAKSEMGQGVRTSLAMLVAEELDADWERVRVVQADLDGRYGNQG
                     TGGSGSVRGSYRTLRESGAAMRSMLIAAAAAQWGVPPAECSTEPSVVVHRGSRRRARF
                     GELATAAASQPIPSSVTLKPRSDWRILGKDRRGIDLPDVTHGRAQYGLDVKIPGMTYA
                     VIERAPVFGATVKSFDAAAAKAVTGVRDVVEVTAVENVKVHAGIAVLADNTWAALEGR
                     RALKVEWNPGPHAAENTAGYQTFMRQALQATGKEVVNQVGDPDAVLAGAAKVYAAEFE
                     APFLSHATMEPMNCTASVDGNTAEIWSPTQFPDWAAGSVAQALGIPGRNVKLHVTLLG
                     GGFGRRINPDFTVEAALVSQKARRPVKVVWTREDDLRHDFYRPCAMHRIEASLGADGY
                     PVAWRHRMSSAAIDATFGPARGGGFGGSEGDGAGNMSYRVPNRSLEYTLLDSGVPRGW
                     WRAVHTTHTTFAVESFIDELAQAAGKDPVEYRLALIDRVPVERPGIGSRDFPFSPERL
                     KAVLRLAAEKAGWNSPVPPGRFRGVACGFDHLSYAAEVVEVSVLNRAVKIERIVCAAD
                     CGPVMNPSGARAQLEGGIIQALSAATRERVTIAGGGVEQRNFDGYPILRINEAPPVIE
                     TWFVETDTNPSGLGEPAVPPLAPALANAVARATGQRPRSLPFRLG"
     gene            complement(8226..8717)
                     /locus_tag="VGA78_12880"
     CDS             complement(8226..8717)
                     /locus_tag="VGA78_12880"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HEX9894815.1"
                     /translation="MRSLVLAIALAAGATPVAAQAHPSREMPHREGMGQGMGQGMMGG
                     GILKSIMPFAPDALLKHGDHLGLTADQVAKLTQLRDQSAAAIKEGHQPAHAAHMSLNQ
                     ALTDTPDDTTAIREFFLAHHTAEGNMEWIRASAAFQARAVLTAEQRTMVESMAKQAKA
                     HDH"
     gene            8835..>10068
                     /locus_tag="VGA78_12885"
     CDS             8835..>10068
                     /locus_tag="VGA78_12885"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9894816.1"
                     /translation="MTVAASSVPPTSQVVVPDFTTAPDLEQSLSELVRGMTGSEVLRI
                     AAEVRRLISSGRSVCNLTVGDFDPKHFPIPPELLAATHQALAAGETNYPPSDGILPLR
                     EAVVEWTADTNGVRYPIESVLIAAGVRPVLYAAFRVVVDPGDVVVYGVPSWNVNHYVW
                     LTGGRAAVIAAERERGFHPTLEEIAPHLDQAAMVCLCSPANPTGTMMDPAELARITEA
                     VVEENLRRQSQGRKALFLLWDQVYGSLVFGAQHAHPVALVPASAPWVIALDGISKAFA
                     ATGLRVGWAFAAPAVAARMRDFLGHVGAWAPRPEQVATSRFLRDATAIRSFRERMDAG
                     ILARLNALHQGFTALRQAGYPVDCVRPQGAIYLALGLDLVGKTFGGRVVATNDDIRKL
                     LLEEAGLAVVPFQAFGVQQ"
BASE COUNT         1570 a         3358 c         3459 g         1681 t
ORIGIN      
        1 cgcaccaggc accgggcact caagcaccgc accgtgcact gcactcggaa cccggaaccc
       61 ggaaccagga actggccttt ttagtggacc tccccccgcc cgccctcgac acggccacct
      121 tcactgagca tgtggtcgag accggcctgg gccgccgccg gtatcgcctt ttcgttccag
      181 gccggaccga cgggggagac ccgctgcccc tgctggtcgt gctccacgga tgcacccagg
      241 acgccgcgga tatcgcacgg ggtacccgat tcaatcagca cgcggagcgg cagggcatgc
      301 tggtgctgta tccggagcag ccgatcgagg ccaacccgca gaagtgctgg aactggtttc
      361 tgcccgccca ccaggggaga gattccggtg aaccggccct ggtcgcgtac ctgacccggc
      421 gggtgatggc ggagtacccg gtcgactccg gccggatcta tctcgtgggc gtctcggccg
      481 gtggagccat ggcggtgctg accgcgattg cgtatcccga gatctacacc gcgctcggag
      541 tgcattccgg catcggatat agggccgcgg agaacctcgc ctcggctctg acggcgatga
      601 agggcgaagg atccccgccc ggcgagctgg cccgtgaggc ccatgcggcg atgggggatc
      661 gagctcgcgc cgtacccatc atggtcgtgc agggtcagct cgaccctgcc gtcaacgccg
      721 ggaacgccca gcgcatatcg gagcagttcg tcaccctggc ggtgatggcg ggatcgggcc
      781 ctgcaccacc cgaaaccgat ggcttcacct caggtgggcg agaagtgacc cggacggtgt
      841 ggctgaccgc cgacgggccc gcgctggtgg aacagtggat catcgagggg ctggcacatg
      901 cctggtccgg cggatcgccc gacggcacct ggaccgaccc ggcggggccg gatgcgtccg
      961 cggaaatgat ccggtttctc ctgtcgcacc ggttgcaggg accttcgaag cgatgaacgg
     1021 tcgcatcctg tttccggtgc ggcccgatcc gatccgagac tgggccggct acgcccccga
     1081 ccggattgcc ctggtcgacc gggcccgtga tctccggcag agttaccgcg agctcgatcg
     1141 cgcgatcagt cgctggaccg gactgctctc gaacctcggc gtggagctgg gccatcgggt
     1201 tgcggtgctg gcggggaacc ggcccgaagt cgtggcactg ctcttcgcgt gccaccggct
     1261 gggggcggcg ctggtaccgc tcaattggcg gcttcccgcc gccgaattga gccccattct
     1321 tcacaatgcc gaggttgccc tgctggtgta cgagggaacc tttcggacca ctctggaagc
     1381 ggcgagcgcc ggtctggacc ggccgccgcg agtcgtggac ctggatgcgg ccacccgact
     1441 cttgactgac gatgaggcca ggtcggtgtc gatcgagccg gaaacgccgg ctctggttct
     1501 ctataccagc ggcaccacgg ggaaacccaa gggcgccgtc ctgcctcacc ggcagctgtt
     1561 ctacaacgcg gtcgcgacgg cgactgcctg ggaactgacc gcggccgatg tcggacccat
     1621 ctccaccccg ttctttcaca ccgggggctg gaacgtgttc gcgcttccgg tgtggcaccg
     1681 tggcggccgg gtggtgctgt tcgagaagtt cgagccctcg gagtttctgg tcgggatggc
     1741 ggaagaggga tgcaccgtgg ccctcacggt cccgacccag ctggtgatgc tgctcgaatg
     1801 ttccgagtgg gggcggccgg tcccttcgct gcgcgcgttc tgggccggcg gcgccccctg
     1861 tcccctgtcg gtgcaggagc gggtccgcgc cgccggctat ggcctgcggg aaggctatgg
     1921 tctgaccgag tgcggcccca actgcttcgt ggcgtctgac gacgaggccc ggcgccggcc
     1981 cggctgggtc ggtcggccga tgctcttcct ctcgatgcgg ctggtgcacg aggacgactc
     2041 cccggtcggg gaaggcgagc ccggtgagct gcagcttcga gggccgcagg tcttctcggg
     2101 gtatctgcac gatccagccc gcagcgcgga agccttcacc gccgatggat ggcttcgcac
     2161 tggcgatctg gctcagcgca gcagcgacgg atgctatcgg atctgcgggc ggcgcaagga
     2221 gatgttcatc tccggcggcg agaatgtctt tccggccgaa gtcgaagctg ctctggcgga
     2281 ccatcccggc gtggtcgagg tggcggtgat cggcgttccc gacgcccggt ggggcgaggt
     2341 cggccgtgcc ttcgtggtcc cacgggcggg gagccggttg gccgaggcca ccgtcgtgga
     2401 acatgcccgc caaaggctgg ccggttacaa ggttcccaaa tcggtcgtcc tgttgcccgc
     2461 cttgccccgg ttggggtcgg gcaaggtgga tcggggcgcg ttgcaggggc tcggagaatg
     2521 acccgcctca ccggtccggt cgccaaggga tcgaccttcg tcgccacgct cgagttcctt
     2581 cgggaagcag gcggcccggc tctgcacgat cgagtcctgc gcgggctcgg cccggccgat
     2641 cgcaaggcca ttcgaggcct cactccgacg tcggaagcgc cttttccact gctgcttcgc
     2701 ctgtggcgct cggccgacgc cgaattggcg agcagggatc cgggctggat cgagcgggcc
     2761 ggtgcgttct ctattgcgtc ggggggtaag cggctctacg gcggcattct ccagaaggag
     2821 tcgccgctcc agtttctcac ccagagtgtt tcgctctttc gcctgttcta tcatcccggt
     2881 gacatggaag tcgtggagga gggacctgac cgggcggtgc tgcgtctggt cgggttccca
     2941 cccaccgacc ggctcttctg ccgccggcag accgggggcc tccagagtgc cctcacgatc
     3001 gcgggcggct cggaaccgtc ggttcggcac gtgcggtgtg agctggaagg cgacgcgttc
     3061 tgtgaatggg agctgcgatg gcgctgactg gcgccgagcg actagttgag aaactccaga
     3121 atggcctccg ccgtccggcg cccgttctcg ccaaatagca tcgtgagatg attcccggtg
     3181 gtctccacgt accggcagtg acgcagagct cggaccgtcg cgcgggcgtc gtcttccggg
     3241 agaatcggcg gcgtcccggg cggtccatag ccttccgggg cgcggaccag cagcatcggc
     3301 tggttcaccc gcgccacgtg atcctcccac ggctccccca gcgcccgatc cagtgcttcg
     3361 gcgatggccc ccgcgctggt ccgcaccgcc acttgtccat cgggcaaggg ctccagctcg
     3421 gcccggaacg ctccctcgag cagcggatgc cagaatccgc ccaggaacgg catggaccgc
     3481 accagggcga tgtaggcatc ggccgatggg tagcgctggg ccagtcgcgc cagcgagggc
     3541 gcgatcaggg cccgcacgtc gtggtgcagc gtggctgcgg catcgagcat gaccactcgg
     3601 gtgacccggt cagggtgctg ggatgccagg tagagactca acagcgcccc gaaggagtgc
     3661 ccgcccaccg tggcgcgatc gatcctgagt tgatccagca gtcccaggat atcggccgcg
     3721 tgatcggcca tgccatatcc tgccgccggc ttgtcgcttc ggcctcttcc ccggagatcg
     3781 ggtgcgatca gccggtgccc gggagccaat ccggccgcgg ctaacccgtc aaaatggtgc
     3841 ccgttggccg agaggccgtg caggagaatc agcggcggcg agttgccggc ataatcgagc
     3901 acgttgagcc gcacctggcc tgccgccagc atcagctcct ggggcggcgt caaatcttgc
     3961 tcccctgacc ggcccagaat tgttcccgca tgacccgttt gagggtcttg ccggccgagc
     4021 tgcggggaaa atcttccaac agcaatacct cgcgcacctg ctggtagcgt gcctccaccc
     4081 ggtcattgat ccagtcccgc agtacctcgg cggacaccac tccggcctcg cgcagaatga
     4141 cggctgctac tggggcctca ccccacttgg agtcgggcac accgaacacg gcgacttccc
     4201 tcacgccggg gtgccgcacc gcgacctcct cgatgtcctt ggggaagacg ttgacgccgc
     4261 ctgagatgat cagatccttc ttgcgatcca ccaggtagag aaagcctgcg tcgtcccggt
     4321 atcccaagtc gccgctcagg agccatccgt cccggatggc ctggctggtc aggtcgggac
     4381 gcttgtaata cccgctcatg agaatgggac cgcggccggc gatctctccg acctgccctg
     4441 ggggaacgtc tcgcccctga tcgtctacga tccgcatctc gaagagcggg ggtgcgattc
     4501 cgaccgaatc cggtcttcgg gcgaagtcgt cgcggtcgag aatggtgacg aacccctcgg
     4561 tcagtccgta cagctcgtga aacacaccgg gaagccgctg ggcaaaccgg tccttgtgct
     4621 cccggtggaa gggagcgccc accgagcaga tcatccggag cgagctcaag tcagtcgctt
     4681 gccaccggga cgactgcatg agcgccacga tctgggaggg gaccatcatg gcgtgggtga
     4741 ctccctcccg ctcgatggtc tcgagaaaac cgtcggggtc gaagcggggc tccagcacat
     4801 aggtgcaacc catcaggcag gccggcatca atgtcacgaa ggcaccattg aagaccagtg
     4861 accccgcgtg caacaccacg ctttccggtg cgatccggaa tgcggcggcg aacagcaggc
     4921 cgtaggtggc gcgcacccgg tgtggcagca cgattccctt gggttggccg gtggtgccgc
     4981 tgctatagat gatattgaag ggctcttcac cggtgagcga tggcaggggc agcgggcccg
     5041 ccgacattcc ctgcatcagc cggctgaggc tgcgatagcc gggagagtcc gagtcgccga
     5101 ccatcagcca attgtcggcg ggaatgtggg agagatccgc ccgtaccgcg tccagcaccg
     5161 gcctcagctc tccggtcgag atgaccgccc gtgcgtcgca atctcgaacc agcgcggcca
     5221 gcccgctgcc acgaagcaat ggactcaagg gaacggtgac gatccccaac cgggccgagg
     5281 cccagtagac cccgagttgc tccaggcagt tgggcagcag caaggcgact ttgtcgccgg
     5341 ctcggagccc cagggaaagc aagctgtgtc ccacccgccc gaccagcgag tgcaactccc
     5401 ggaagctgag ccgctggttt ccgaacacca ccgcggtgtg gtccgagcgg gattgcgcat
     5461 gccggtcgag cagcgccgca aggtggagtg tcatgggggc tgaatcctgg cgcagcgccc
     5521 gccgccgggc aagcgcagga aacaaccgtg atatactgtt catcgccatg aaactcacca
     5581 tcaacggcgt tgcccgcgac gtcgacgtcc cccccgccat gccgctgctg tgggtcctgc
     5641 gtgatgtgct gggattgacc ggtaccaagt acggctgcgg gatggccctc tgcggcgcct
     5701 gcaccgtgca cctcgacggc aaccccatcc gttcctgctc cacgccggtt tccgcggccg
     5761 aaggcaaggc ggtccgcacc atcgaaggac tggcccagaa cgaccgggat catccggtcc
     5821 agcaggcgtg ggccgaggtg aacgtccccc agtgcggcta ctgccaggcc ggccagctga
     5881 tgagcgcggc cgcactcctc gagcggagcc cccgtccttc ggctgaagag atcgactcgt
     5941 tcatggccgg caacctgtgt cgttgcggca cctacctgcg gattcgtcaa gcggtgcaac
     6001 gcgccgccga gatcaaggcg gggagatagc catggccgcc atccccttca cccggcgcga
     6061 ctttctgcgg gtatccgccg tgggcggcgg actgttgctc ggcgtgccct tcgagtcggc
     6121 ctgcggcctg atcgggggac agagtgccgg gccgcgaccc gatgtctggg tcaagctcga
     6181 tcccgatgac agcatcacga tcaccgtcgc caaatcggaa atgggacagg gcgtgcggac
     6241 cagcctggcg atgttggtgg ccgaggagct cgacgccgac tgggagcggg tcagggtggt
     6301 ccaggccgat ctcgacggcc gctacggtaa tcaggggacc ggcggcagtg gcagcgttcg
     6361 cggcagctac cggaccctgc gtgaaagcgg ggcggcaatg cggtcgatgc tgatcgcggc
     6421 cgcggccgcc cagtggggcg ttcccccggc cgaatgcagc accgaaccct cggtggtggt
     6481 gcaccgcggc agtcgccgcc gggcccggtt tggagagctc gccaccgccg ctgcctccca
     6541 gccgatcccc tcgagcgtca ccctcaagcc caggagcgac tggaggatcc tggggaaaga
     6601 ccgccgcggc atcgatctgc cggatgtgac ccatgggcgg gcgcaatacg gcctcgacgt
     6661 caagatcccc gggatgacct acgccgtgat cgaacgcgcc ccggtcttcg gcgcgaccgt
     6721 caagtccttt gatgccgcgg ccgcgaaggc cgtgaccggg gtgcgggacg tggtggaggt
     6781 gaccgcggtc gagaatgtga aagtccatgc cggtattgcg gtcctggccg acaacacctg
     6841 ggccgccctc gaagggcgac gcgcgctcaa ggtcgaatgg aacccgggcc cccacgccgc
     6901 ggaaaacacc gcggggtacc agaccttcat gcgccaggcg ctgcaggcca ccggcaagga
     6961 agtggtgaac caggtgggcg atccggacgc ggtcctcgcc ggtgccgcga aggtctacgc
     7021 ggccgagttc gaagcgccgt ttctctcgca cgcgaccatg gagccgatga actgcacggc
     7081 ctcagtcgac gggaacaccg ccgagatctg gtcgcccacc cagttccccg actgggccgc
     7141 cgggtcggtg gcgcaggcgc tggggattcc ggggaggaac gtgaaactcc acgtcacgct
     7201 gctgggtggt ggcttcggcc gccgcatcaa cccggatttc acggtggaag cggccctcgt
     7261 gtctcagaag gctcgacggc cggtgaaagt ggtgtggacc cgggaagatg acctgcggca
     7321 tgacttctac cgtccctgtg ccatgcaccg gatcgaggca tcgctcggcg ccgacggcta
     7381 tccggtggcc tggcggcatc ggatgtcgtc cgccgccatc gatgcgacct tcgggccggc
     7441 tcggggcggc ggcttcggcg gcagcgaagg cgatggggca gggaacatgt cgtatcgggt
     7501 gccgaatcgt tcgctcgagt acaccctgct cgactccggc gtgccgcggg gctggtggcg
     7561 cgcggtccac accacccata ccacgttcgc ggttgagagc ttcatcgacg agttggcgca
     7621 agccgcgggg aaggacccgg tggaataccg cctcgcgctg atcgaccgcg tgccggtgga
     7681 acgacccggg atcggcagcc gcgattttcc cttcagtccc gagcggctca aagcagtgct
     7741 gcgtctggcg gcggagaagg ccggatggaa cagtcccgtg ccgccagggc gtttccgggg
     7801 cgtcgcttgt ggcttcgacc acctgagtta tgcggccgaa gtggtggagg tgtcggtctt
     7861 gaaccgggcg gtgaagatcg aacggatcgt ctgcgcggcc gactgcggtc cggtgatgaa
     7921 tcccagcggt gcccgggccc agctcgaggg cggcatcatc caggccctct cagcagccac
     7981 ccgggagcgg gtcaccatcg cgggtggggg cgtggagcag cgcaacttcg atggctaccc
     8041 catcctgcgg atcaacgaag cgccaccggt gatcgagacc tggttcgtgg agaccgacac
     8101 caatccaagc ggtctgggcg agccggcggt gccgccgctc gctccagcgc tggcgaacgc
     8161 ggtggctcgg gccaccggtc agcgcccccg gtcgctgccg ttccggctcg ggtaaaccct
     8221 cgcgatcaat ggtcgtgggc cttggcttgc ttggccatcg actcgaccat cgtccgctgc
     8281 tcggcggtca gcaccgcccg cgcctggaac gccgcgctgg cgcggatcca ctccatgttc
     8341 ccttccgccg tgtgatgcgc caggaagaac tcgcgaatgg cggtggtgtc gtcgggcgta
     8401 tccgtgagcg cctgattgag actcatgtgc gcggcatggg ccggctggtg cccctctttg
     8461 atggctgcgg ccgactggtc tcggagctgg gtgagcttcg ccacctggtc ggcggtgagc
     8521 ccgagatgat cgccgtgctt gagcagggca tcgggggcga agggcatgat cgacttcagg
     8581 attccaccac ccatcatgcc ctgacccatc ccttgaccca tcccttcccg atgcggcatc
     8641 tcccgggatg ggtgggcctg ggccgccacc ggagtggcgc cggcggcgag cgcgatggcg
     8701 agtacgagtg accgcatgac gtctccctcg agaacggttg gttcctctca agatagccgc
     8761 ggcccccgga aagaccgcct ttctcgacta catttcgggg agatttcacg aaacctttat
     8821 ccggaccgga cgccatgacc gtcgccgctt cgtcagtccc gcctacgagc caggtcgtcg
     8881 tccccgactt caccaccgct ccggatctgg agcagtcgct gtcggaactg gtccggggga
     8941 tgacgggctc ggaggtcctc cgcatcgcgg ccgaggtccg gcggctgatc tcctccgggc
     9001 ggtcggtctg caacctcacg gtgggtgact tcgaccccaa gcacttcccc attccgccgg
     9061 agctgctggc ggcaacccac caggcgctcg cggcgggcga gaccaactat ccgccctccg
     9121 acgggattct gccgctgcgc gaggccgtgg tggagtggac cgctgacacc aacggggtcc
     9181 gctatccgat cgagtcggtg ctgatcgccg ccggcgtgcg gccggtgctc tacgcggcgt
     9241 tccgggtggt ggttgatccc ggcgacgtgg tggtctacgg cgtcccgtcg tggaatgtga
     9301 atcactacgt ctggctcacc ggcggacgcg ctgcggtgat cgcggccgag cgggaacgag
     9361 gcttccatcc aacgttggaa gagatcgccc cccacctgga ccaggccgcc atggtctgcc
     9421 tctgttcccc cgccaatccc accggaacca tgatggatcc ggccgagctg gcccgcatca
     9481 ccgaggcggt ggtcgaagaa aacctgcgcc ggcagtcgca gggcagaaaa gccctcttcc
     9541 tcctctggga tcaggtgtac ggctcactgg tgttcggagc ccagcacgcc cacccggtgg
     9601 cgctggtccc cgcatcggcc ccgtgggtca tcgcgctcga tggcatttcc aaggccttcg
     9661 ccgcgaccgg gctccgggtg ggttgggcct tcgccgcccc cgcggtggcg gcccggatgc
     9721 gcgacttcct gggccatgtg ggcgcctggg cccctcggcc ggagcaggtg gccacgtctc
     9781 gctttctccg tgatgccacc gcgatccggt cgtttcggga acggatggat gccggcatcc
     9841 tggcacggct gaacgcgctg catcagggct tcaccgccct gcgccaggcc ggctatccgg
     9901 tcgactgcgt ccgaccgcag ggcgccatct atcttgccct gggactcgat ctggtgggaa
     9961 agaccttcgg cgggcgggtg gtcgccacca acgacgacat ccggaagctg ctgctggagg
    10021 aagctggtct ggcggtggtg ccgttccagg ccttcggagt gcagcagg
//
LOCUS       DASWKS010000453         6497 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2474474, whole genome shotgun sequence.
ACCESSION   DASWKS010000453 DASWKS010000000
VERSION     DASWKS010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6497
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474474"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(297..1511)
                     /locus_tag="VGA78_12890"
     CDS             complement(297..1511)
                     /locus_tag="VGA78_12890"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894817.1"
                     /translation="MIIGEIVKVAFQSIRANKLRASLTMLGVIIGVAAVITVVALSTG
                     AQKAVEERIQALGANLLSIYPGQSFFGGRASEQRVSLTTDDAEALERDGHLFEGVLPE
                     MQRSFQVELAGRNANLNIVGTTANFDEVRNFQLTHGHFFTEGDDGARQRYAVLGAQVP
                     IIFDANPVSMIGQTLQIRGQSFEIIGILEAKGSQGGFNNPDEQIVIPLKTAQFRIFGS
                     DRLRSISVAIKDDVPLEQGMVDIERVMRREHKIRPGGENDFQIRNQQEILATQQQTTQ
                     TFGVLLASIAIVSLVVGGIGIMNIMLVSVTERTREIGIRKALGATRSNIMFQFLIESL
                     VLCLAGGGLGIALGAGASTILSARFGWNTLVDPRAVLVAFLFSAAVGLAFGLWPARRA
                     ATLNTIDALRYE"
     gene            complement(1508..3091)
                     /locus_tag="VGA78_12895"
     CDS             complement(1508..3091)
                     /locus_tag="VGA78_12895"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9894818.1"
                     /translation="MRTRLLPALALALACREEAPVPVYQAIPVERRSITVSVRAAGTV
                     QPDTLVEVKSKASGEILDIRVETGQQVKRSELLVRVDQRTARNALSQAEAQLQVAQAR
                     LANAETQRRRSDELFKSRSITEQEMETATLAVANARAEVVNGQVAVENARIRMDDTDV
                     LAPITGTVISKSVERGQVISSPSSDVGGGTVLLRMADLTLVQVRTLVDETDIGKVQPG
                     LRSTVTVDAYPNQPFQGEVLKIEPQAETAQNVTMFPVLVRIENRNGLLKPGMNADVEI
                     HVGQRDSVLAVPNAALRTERDVSSAAQVLEIAPEQLQDLMQQAAAQRDSAQRERLAQR
                     GDSARGGSSVAPASAPPQSARPATGGGATMTTPDGRTVQLPAGVTEAEVRALFQKRFS
                     GGQLSADEQAKLRQVMSAMGGGRRPGAAGAAAGARRAGGTDYQFGGNYIVFVRRGGET
                     RPVHVRTGLTDLDYSEIVWGLELSDSVIVLPSASLVQSQEEFRNRIGQRMSGGVPGMR
                     QDQQPAPTTQARPQGGGRP"
     gene            complement(3091..3846)
                     /locus_tag="VGA78_12900"
     CDS             complement(3091..3846)
                     /locus_tag="VGA78_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9894819.1"
                     /translation="MTVGIGTTAERMARLPGDVPRDAVIVTRNLKREYEMGAEIVRAL
                     RGVDVTIRRNEFVAIMGPSGSGKSTLMNLIGCLDTPTEGEYWLNGHRVSELNDNALAR
                     IRNKEIGFVFQTFNLLPRATALQNVELPMVYAGMPSKQRQKAAQEALRRVGLADRVSH
                     RPNELSGGQRQRVAIARALVNQPSILLADEPTGNLDSKTSEEILGLFEQLYDEGQTII
                     LVTHEHDIAAHARRQVHLKDGLVESDHKTEKLA"
     gene            complement(3843..5147)
                     /locus_tag="VGA78_12905"
     CDS             complement(3843..5147)
                     /locus_tag="VGA78_12905"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9894820.1"
                     /translation="MKAAAARWWSGLALTALAVGPAWSQSRVTLDEAISRARRVQPVV
                     IQAEGQVRNAEARVRSARGAFLPNLTLSGNGQSFFSEQNRVDPLTGLPVLSGETSQSA
                     SGSLSTSIELWDGLRRPNELKSARASTEAAEANLRDASFQQALTTTNQFLDALAARKL
                     LAVREASVRRAEEQLKTSVARLQAGAAIRSDSLRSLVGVGNAQLQLLTTQAQLATAEA
                     NLGRLIGESGRVEAADDSAFYRVITAVDADQLLAEAVARSPQVEAADASLRSAGAALS
                     ASRSPYWPSLNLSASTSLNGNEASDWRFRQQRQLTLGLQWSIFNRFTREQSIATNQVN
                     VDIARATLEESRRGVVADLTQRVAELEAARLRIDITQRSVVAAQEDLRVQQDRYRLGV
                     STILDVLTTTEALDQAEVDVVNARFDYLRAKAAIEAIIGRSL"
     gene            complement(5144..5527)
                     /locus_tag="VGA78_12910"
     CDS             complement(5144..5527)
                     /locus_tag="VGA78_12910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894821.1"
                     /translation="MMRSRVAAAGLLLAVFGLGAVAGGVGITVAEHRVERGVKGSHGR
                     AGFLARLTDQLDLNQSQRDSICSILERHRPLMDSMWGDVRPRFDSVRSAMRQEIQGQL
                     NPEQQLRYQEMLQRKLHENKDRRCQ"
     gene            complement(5524..5871)
                     /locus_tag="VGA78_12915"
     CDS             complement(5524..5871)
                     /locus_tag="VGA78_12915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894822.1"
                     /translation="MNHPTPFDGGADPELGAELREALDGPSPDGFLARVKLAVLQAGR
                     RETSWDVLARWSPAGLVAAVAAALLLWMVLRPAEPAGDVAGQLIASAPARMEVAPAQP
                     ETDVLLTSLLEGR"
     gene            complement(5868..>6497)
                     /locus_tag="VGA78_12920"
     CDS             complement(5868..>6497)
                     /locus_tag="VGA78_12920"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894823.1"
                     /translation="HRPPVRPSARPSVRASVRQRLEPSLRTSDVSDADLARQAAAGDG
                     DAFGVLVERYGLGARRVARAVLGPGDDADDAVQDGFIAAWRAIERFDPERSFRPWLMR
                     IVSNAALDLLRRRKVRRATAVPDTVESPGVSPDRAAEGALLRERLTSALVELPERQRI
                     AVVLFDAEGYSHGDIAEILGVPVGTVRSYVFHARRALRRALGVFQEEEG"
BASE COUNT          988 a         2298 c         2146 g         1065 t
ORIGIN      
        1 aagcgaaacg ccggtctcac ccggtgttat ccagtgccgt tcccgaatgc cggttcgctc
       61 ccggatccac tcgtcagagg tgtcgatctg gcgggccaga tcatcgttgg tgacgatccg
      121 ttggggcacc gcgtgaccgg taccgaggat gacggtgtgg ggcatggggg agacaatcta
      181 ctccctggcg ggcggggggg caggcgggcc ggcgagcggc ccaaaagtga accagattcc
      241 gcggcccggc cttctcacaa ccgtccgccc gcccgccgga ccgcctgccc gccggcctat
      301 tcgtaccgca atgcgtcgat cgtattcagg gtcgccgccc gccgagccgg ccacagaccg
      361 aatgccagtc cgaccgcggc gctgaagagg aacgccacca gcacggcccg gggatcgacc
      421 agggtattcc agccaaacct ggccgagagg atggtcgagg ccccggcacc cagcgcgatc
      481 cccagcccgc cgcccgccag gcagagcacc agcgactcga tcaggaactg gaacatgatg
      541 ttggaccggg tggcgcccag cgcctttcgg atgccgatct cgcgggtgcg ctcggtgacc
      601 gagaccagca tgatgttcat gatgccgatc ccccccacca ccagcgacac gatcgcgatg
      661 ctggccaaca ggaccccgaa ggtctgggtg gtctgctgct gggtggcgag gatctcctgc
      721 tggttccgga tctggaagtc attctcgccg ccgggccgga tcttgtgctc ccgccgcatg
      781 acccgctcga tgtcgaccat gccctgctcc agcggcacat cgtccttgat cgccacgctg
      841 atggaccgca gccggtcgct gccgaagatc cggaactggg ccgtcttgag cgggatcacg
      901 atctgctcgt cgggattgtt gaagccgccc tgcgagcctt tggcttccag aatgccgatg
      961 atctcgaacg actgtccccg gatctggagg gtctggccga tcatcgagac cggattggcg
     1021 tcgaagatga tgggtacctg ggcgcccagc accgcatacc gctgccgggc cccgtcatcg
     1081 ccttcggtga agaaatgccc gtgggtcagc tggaagttgc gaacctcgtc gaagttggcc
     1141 gtggtgccga cgatgttgag gttggcgttt cggccggcca gctccacctg aaagctgcgc
     1201 tgcatctcgg gcaggacgcc ttcgaacaga tggccgtcgc gctccagcgc ctcggcgtca
     1261 tcggtggtga ggctcacccg ctgctcgctg gcccggccgc cgaagaacga ctggcccgga
     1321 tagatactga gcaggttggc gcccagggcc tggatccgct cttcgaccgc tttctgcgcc
     1381 ccggtcgaca gcgccaccac ggtgatcacg gccgcgacgc cgatgatcac gcccagcatg
     1441 gtgagcgagg cccgcagctt gttggcccgg atgctctgaa aggcgacctt gacgatctcg
     1501 ccgatgatca tggccggccg cctccctggg gccgcgcctg ggtggtcggc gccggctgct
     1561 gatcctgccg catccccggc acgccaccac tcattctctg gcctatccgg ttccggaact
     1621 cctcctgcga ctgcaccagg ctggcgctcg gcaggacgat gaccgaatcg ctgagctcca
     1681 ggccccagac gatctcggag tagtccagat cggtcagccc ggtccggacg tggaccgggc
     1741 gagtttcgcc gccccgtcgc acgaacacga tgtagttccc gccgaactgg tagtcggtgc
     1801 cgccggcgcg ccgggctccc gctgcggccc ccgccgcacc gggccgccgg ccgccgccca
     1861 tcgccgacat gacctggcgc agcttcgcct gctcgtcggc cgagagctgg cccccggaaa
     1921 accgtttctg gaacagggcc cggacctcgg cttcggtcac gccggccggc aactgcacgg
     1981 tgcggccgtc gggggtggtc atggtggccc cgcccccggt cgccggccga gccgactggg
     2041 gcggcgcgga cgcgggcgcc accgatgagc cgccccgggc ggagtcgcct cgctgagcca
     2101 ggcgttcccg ctgggccgag tcgcgctggg cggcggcctg ctgcatcagg tcctggagct
     2161 gctccggagc gatctccagc acttgggctg cggagctgac gtcccgctcg gttcggagcg
     2221 ccgcgttagg cacggccagg acgctgtccc gctggcccac gtggatctcg acatccgcgt
     2281 tcatccccgg tttgagcagt ccgttgcggt tctcgatccg gaccagcacc gggaacatgg
     2341 tgacgttctg cgccgtctcc gcctggggct cgatcttgag gacctcgccc tggaacggct
     2401 gattggggta cgcgtccacc gtcacggtgg agcggaggcc gggctgcacc ttgccgatgt
     2461 cggtttcatc gaccagggtg cggacctgga ccagggtcaa gtcggccatg cggagcagga
     2521 ccgtcccacc gcccacgtcg ctggaaggcg aggagatgac ctgtccccgt tccacgctct
     2581 tggagatgac cgtcccggtg atcggggcca acacgtcggt atcgtccatc cggatgcggg
     2641 cgttttccac cgcgacctga ccgttcacca cctcggcccg cgcgttggcc acggccagag
     2701 tcgcggtctc catctcctgc tcggtgatcg atcgcgactt gaacagctcg tcggaacgac
     2761 gcctctgggt ctcggcgttg gccagccggg cctgggccac ctgcagctgc gcttccgctt
     2821 gcgacagcgc attccgggcc gttcgctgat cgacccggac cagcagctcg ctccgtttga
     2881 cctgctggcc ggtctccacc cggatgtcga ggatttcgcc cgaggctttg gacttcacct
     2941 cgaccagcgt gtccggttgg acggttccgg ccgcgcgcac cgagacggtg atggagcgcc
     3001 gttcgaccgg aatggcctgg tagaccggca cgggggcctc ttccctgcaa gcgagggcca
     3061 gagccaaggc cgggagcaat cgggtgcgca tcaggcgagc ttctccgtct tgtggtcgct
     3121 ctcgaccagg ccgtccttca aatggacctg ccggcgggcg tgagccgcga tatcgtgttc
     3181 gtgggtgacc aggatgatgg tctggccttc gtcgtacagc tgctcgaaca accccagaat
     3241 ctcctcggac gtcttggaat cgaggttccc ggtcggttcg tcggccagca ggatgctggg
     3301 ctggttgacc agcgcgcggg cgatcgccac ccgctgccgc tgaccacccg acagctcatt
     3361 gggccggtgg gatacccggt cggccaggcc cacccttcgg agcgcctcct gcgccgcttt
     3421 ctggcgctgc ttggacggca tccccgcata gaccatcggc agctcgacgt tctgcagcgc
     3481 cgtggcccgg ggcagcaggt tgaaggtctg gaagacgaat ccgatttcct tgttccggat
     3541 ccgggccagg gcgttgtcgt tgagctccga cacccgatgg ccgttgagcc agtattcgcc
     3601 ctcggtcggc gtatcgagac agccgatcag gttcatcagg gtggatttcc ccgagcccga
     3661 cgggcccatg atcgccacga actcgttgcg gcgaatggtg acgtccactc cccggagggc
     3721 gcgcacgatt tccgcgccca tttcgtattc ccgcttgaga ttgcgagtca cgatgactgc
     3781 gtcgcggggc acgtcccccg gcagacgcgc catgcgttcg gcggtggtgc cgatcccaac
     3841 cgtcacaaag acctcccgat gatggcttcg atggccgcct tggcccgcag atagtcgaac
     3901 cgggcattca ccacgtccac ctcggcctgg tcgagcgctt cggtggtggt cagcacgtcg
     3961 aggatggtgg agacgcccag gcggtagcgg tcctgctgga cccggaggtc ttcctgcgcg
     4021 gccaccacgc tgcgctgggt gatgtcgatc cggagccggg ccgcctcgag ctcggccact
     4081 cgctgagtga gatcggccac cactcctcgg cgggattcct ccagcgtcgc gcgcgcgata
     4141 tcgacattca cctggttggt cgcgatgctc tgctcccggg tgaagcggtt gaagatgctc
     4201 cactgcaggc cgagggtgag ctgccgctgt tgccggaagc gccaatcgct cgcctcattg
     4261 ccgttgagtg aggtactagc cgagagattc aggctgggcc agtagggcga gcgcgacgcg
     4321 ctcagggcgg cgccggccga ccggaggctg gcatcggcgg cttcgacctg aggcgaacgg
     4381 gccaccgcct cggccagcag ctggtcggca tcgaccgcgg tgatcacccg atagaacgcc
     4441 gagtcgtcgg ccgcctccac ccgaccggat tcgccgatca gccgccccag attggcctcg
     4501 gcggtggcca gctgggcctg ggtcgtcagg agctgcaact gcgcgttgcc cacgcccacc
     4561 agcgaccgaa gcgagtcgga ccggattgcg gcgccggcct ggagccgcgc caccgacgtc
     4621 ttgagctgtt cctcggcccg ccggacgctg gcttcgcgca ccgccagcag cttccgggcg
     4681 gccaatgcgt ccaggaactg gttggtggtg gtgagcgcct gctgaaacga cgcgtcgcgc
     4741 aggttggctt cggccgcttc ggtgctggcc cgggccgact tgagctcgtt gggccggcgc
     4801 aagccgtccc acagctcgat cgaggtactg agggacccgg acgcgctctg tgaggtctca
     4861 ccgctcagca ccggaagccc ggtgagggga tcgacccggt tctgctcgga aaagaagctc
     4921 tggccgttcc cgctcagcgt caggttggga aggaacgccc cccgcgcgct tcggacccgg
     4981 gcttcggcgt tccgcacctg cccctcggcc tggatcacca ccggttgcac ccgccgggcc
     5041 cgggagatcg cttcgtccag ggtgacccga ctctggctcc acgccggccc cacggccagc
     5101 gccgtcaacg cgaggccgga ccaccaccgt gctgctgccg ccttcactgg catctccgat
     5161 ccttattctc atgcaacttg cgctgcagca tttcctggta gcgcagttgc tgctcgggat
     5221 tgagctggcc ctggatttcc tggcgcatcg cgctgcgcac cgagtcgaag cggggccgga
     5281 cgtcccccca catggaatcc atgagcggac gatgccgctc gagaatggaa cagatgctgt
     5341 ctcgctgaga ttggttcaga tccagctgat cggtgaggcg ggccagaaac ccggcccgcc
     5401 catgcgagcc cttcacgccc cgctcgacac ggtgctccgc gacggtgatc cccacgccgc
     5461 cggcgaccgc gcccagcccg aagaccgcca acaacagccc ggccgccgcc actcgcgagc
     5521 gcatcatcgt ccctccaaca gcgacgtcag caacacgtcg gtttcgggtt gggccggcgc
     5581 cacctccatg cgcgcgggcg cggaggcgat cagctgcccg gcaacgtcac cggcgggctc
     5641 ggccggtcgc agcaccatcc acagcagcag ggcggccgcg acggccgcga ccaggccggc
     5701 cggtgaccag cgcgccagca catcccaact ggtctcccgt cggccggcct gaagcaccgc
     5761 caacttcacc cgggccagga acccgtccgg agacggtcca tccagggctt cccgcagctc
     5821 cgcacccagt tcgggatcgg ccccgccgtc aaatggtgtg ggatggttca tccttcctcc
     5881 tcctggaaga cgcccaacgc tcgtcgcagc gcccgtcgcg cgtgaaacac atacgaccgg
     5941 accgtcccta ccggcacccc cagaatctct gcgatatccc cgtggctgta gccctcggca
     6001 tcgaacagca ccaccgcgat ccgctggcgt tctggcagct ccaccagcgc gctcgtgaga
     6061 cgctccctca gcagcgcccc ctcggccgcc cggtcgggtg aaaccccggg tgactcgacc
     6121 gtatcgggca ccgcagtggc ccggcgcacc ttgcgccgcc gcagcagatc gagcgcggcg
     6181 ttggacacga tccgcatgag ccagggccga aacgaccgct ccggatcgaa ccgctcgatg
     6241 gcccgccagg ccgcgatgaa cccatcctgg accgcatcgt cggcgtcatc tccgggcccg
     6301 agtaccgctc gagcgacccg acgggcgccc agcccatagc gctccactaa caccccaaac
     6361 gcatcaccgt cgccggcagc agcctgccgg gcgaggtcgg cgtcgcttac gtcagaggta
     6421 cgcagggagg gctccaggcg ttgacggacg gacgcacgga cggaagggcg ggcggacggg
     6481 cggacgggcg gacggtg
//
LOCUS       DASWKS010000454         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_234228, whole genome shotgun sequence.
ACCESSION   DASWKS010000454 DASWKS010000000
VERSION     DASWKS010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234228"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VGA78_12925"
     CDS             <1..374
                     /locus_tag="VGA78_12925"
                     /inference="COORDINATES: protein motif:HMM:NF024102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BsuPI-related putative proteinase inhibitor"
                     /protein_id="HEX9894824.1"
                     /translation="TMVNDSVAVTLEAPASVKAGAPVAFRVALANPTSRPVMLYLLGR
                     EVTFDITVSGPGGAEVWRRLEDSPFQEILAVRTLAPRERIVLEAEWPGGRQVGNYTAT
                     AKVLTDGIPLQSSPIRFEIRP"
     gene            complement(507..884)
                     /locus_tag="VGA78_12930"
     CDS             complement(507..884)
                     /locus_tag="VGA78_12930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894825.1"
                     /translation="MQRDLVLRWIEQLGVLIRRLLQGKAAADLPAAREQVREATEALL
                     GPLSPLVPKLEVESAAELLADPDRIFGYAQLLDLDSLIAGAVGDAAAQAEGRDRALAL
                     AAEAVRRSNEPRPSWESWISERG"
     gene            complement(899..>1808)
                     /locus_tag="VGA78_12935"
     CDS             complement(899..>1808)
                     /locus_tag="VGA78_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894826.1"
                     /translation="FHGATLSGELDTDFYGGQQPSGGGRTHPVVRIRRVFAEARWTAL
                     TLLVGQEAPPLFDVSPSTLASTGFPGFASAGNLWLWLPQIRLTGWLTPGARVRIGLEG
                     TVLAPSAGEPQDPFLTQPDRAERSGRPALEGRLLARWGEGATLGEIGTGGHNGWLAIP
                     GDSLISSRALGASARIPLGRRIEIRGEAFTGQALAGLGGGGIGQNLSPTNAAVETKGG
                     WAQLLVKPGSDHEIGVGYGMDDPDNADLGPSGRLRNAAFMIHLLGRIKPAVVALEYRL
                     TETSYASAGAGDRRNHHVNLAAGIEF"
BASE COUNT          301 a          620 c          599 g          288 t
ORIGIN      
        1 ccaccatggt caacgactct gtcgcggtaa cattggaggc gccggcctcg gtcaaggccg
       61 gcgccccggt cgccttccgg gtggcgctgg ccaatcccac cagtcggccg gtgatgctct
      121 acctgctggg acgggaggtg accttcgaca tcacggtgtc gggtcccggc ggtgccgagg
      181 tctggcggcg cctggaggac tcgccttttc aggaaatcct cgcggtccgc acgctggcgc
      241 cgcgagagcg aatcgtgctg gaggcggagt ggcccggcgg gcgccaggtg gggaattaca
      301 cggccaccgc gaaggtgctg accgacggca taccgctcca gtcttcacca atcaggtttg
      361 aaatcagacc ttagaaccga atgcagaatg cagagtgcag gatgcagagt taggaggggt
      421 cggccatgcg tggggttcac gcgtcggagc ccgccatgtg aacccttctg cactctgcat
      481 cctgcactct gcattctgaa ttcgctttaa ccccgctcac tgatccagga ctcccaagac
      541 ggtctgggtt cattcgatcg ccgaactgcc tcggccgcga gggccagcgc ccggtcccgc
      601 ccctccgctt gggccgcggc atcgcccacc gcaccggcga tcaggctgtc gagatccagc
      661 agctgcgcgt aaccgaagat ccgatcggga tccgccagga gctccgcggc gctctccacc
      721 tcgagcttgg gaaccagcgg ggaaagcggg cccagcagag cttcagtcgc ttcccgcacc
      781 tgctcccggg cggccgggag atcagcagcg gccttcccct ggagcagacg ccggatgagg
      841 acgcctaact gttcgatcca gcggagcacc aggtcgcgtt gcaccagttg tcacaggctc
      901 agaattcgat cccggccgcc agattcacat ggtgattccg gcgatcgccc gcaccggccg
      961 aggcgtagct ggtctcggtg aggcggtatt cgagggcgac tacagcgggc ttgatccgtc
     1021 ccagcaggtg gatcatgaaa gcggcattgc gaagccggcc ggacggtccc aggtcggcgt
     1081 tgtcgggatc gtccatgcca tagcccacgc cgatctcgtg gtcgctcccg ggcttcacta
     1141 ggagctgagc ccagcctccc ttggtttcca ccgctgcgtt ggtgggagag aggttctggc
     1201 cgatgccccc gccccccagg ccggcgagcg cttgcccggt gaacgcttca ccccggatct
     1261 cgatccgcct tcccagggga atccgcgcac tcgcgccgag ggcccgcgag ctgatcagtg
     1321 aatcgcccgg aatcgccagc cagccgttgt ggccgccggt gccgatctct cccagggtcg
     1381 ctccctcgcc ccaacgggcc agcaaccggc cctccagggc gggtcggccg ctccgctccg
     1441 cccgatcggg ttgagtgaga aagggatctt gcggttcacc agcgctgggg gcgaggacgg
     1501 ttccctcgag cccgatccgt acccgggccc cgggcgtcag ccagccggtg aggcgaatct
     1561 gcgggagcca gagccagagg ttcccggccg aggcgaaccc cgggaaaccg gtgctggcca
     1621 gagtcgacgg actcacgtcg aaaagcggag gcgcctcctg gcccaccaac agagtcagag
     1681 ccgtccagcg agcttcggca aacacccgtc gaatccgcac caccgggtga gtgcggcccc
     1741 cgccggaggg ctgctgcccg ccatagaagt cagtgtccag ctcgccggaa agggtggcgc
     1801 cgtggaac
//
LOCUS       DASWKS010000455         9392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2477542, whole genome shotgun sequence.
ACCESSION   DASWKS010000455 DASWKS010000000
VERSION     DASWKS010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2477542"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VGA78_12940"
     CDS             complement(<1..368)
                     /locus_tag="VGA78_12940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894827.1"
                     /translation="MHRRQIPGFLVLATIAGTASLPAQDSTVSPPPPVVGRIELTRRN
                     IFADSEATFFAPRLVNRFHVTTRPYVIERELLFERGQALRPDALEETARNLRRLGVFR
                     RVLVDTVRRGATLVALVETQ"
     gene            complement(420..683)
                     /locus_tag="VGA78_12945"
     CDS             complement(420..683)
                     /locus_tag="VGA78_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894828.1"
                     /translation="METIRTTVTEAPAGRHMGDLSRGGTNWKVFLETRPQGELVGGRV
                     HFVSDQGPRTTAWIFLEWSDQDAVQRFNEFSPIELWKILESLA"
     gene            996..1547
                     /locus_tag="VGA78_12950"
     CDS             996..1547
                     /locus_tag="VGA78_12950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894829.1"
                     /translation="MVTLLATGGTIFLLRQPSPPADAPDPGVAPPNGGFTSQAPDIST
                     LSARQAFDRLFNRVMAAAEQGDSATVVRFSEHALAAYTQLDSVDADARYHAAVLQAQV
                     GRYDAALALADTILARAPGHLLGWLVRGTVAELRNDPAALAIARREFLAAWARDPGTG
                     RSEYLDHKPALDQFYATSVNGER"
     gene            1661..2494
                     /locus_tag="VGA78_12955"
     CDS             1661..2494
                     /locus_tag="VGA78_12955"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HEX9894830.1"
                     /translation="MRTIHVAHSPDSDDAFMFYALAEGLVDTPFRYVHELADIESLNR
                     RALAGELEVSAVSIHAYALLADRYALLGSGCSMGDGYGPRLVSRLPRPGDPRPAVAGR
                     RVGVPGLLTTAYLALKLYQPAIEPVVMPFDQIEDAVERGEVEVGLLIHEGQLTHGDRG
                     LNLWEDLGAWWQRESDLPLPLGGNVVRRDLGPEVVQQVARDVRASVEYALDHRPAALA
                     HASRFNRGLSDERADQFVGMYVNHWTVDYGPVGRRAVRALLDLAADQGLVPRVSVEFA
                     G"
     gene            2550..3614
                     /locus_tag="VGA78_12960"
     CDS             2550..3614
                     /locus_tag="VGA78_12960"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX9894831.1"
                     /translation="MPHSAPPPAPIREPDRGPVGILVVDDEEPIRNALRRFLAQEKYE
                     VVTAATGAEALAAVGRHRVGCVLLDLRLPDEPGTDLVPQLLDADPDLAILVLTAVNDA
                     ATAALCLQRGALDYLVKPVDLADLLRAVQRVLRRRDARLESQRLNSLLREEVALRTAE
                     LQQERESLQRLAVATLEALVNALEAKDRHLRGHSARVADLAAKLATASGMPEEQVETV
                     RTAGRLHDIGKIGIRESILNKQGPLTDDEFAHVKTHTLVGAQILAPLGHLADVIGYVR
                     SHHERWDGKGYPDGLAAEAIPVGARIIGAVEIFDALTTSRPYQETMSPRQAVERMADL
                     VGTVIDPSVHDALDRVVNRK"
     gene            3611..4681
                     /locus_tag="VGA78_12965"
     CDS             3611..4681
                     /locus_tag="VGA78_12965"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9894832.1"
                     /translation="MSDRSTVSLLLIEDDASMARLIRHLLELDGYRRIRHVWSAEQAV
                     GAAAEADIILLDHQLPDVRGMDLLPRLLGRPDPPSVIMVTGHGSESLAAAALRQGAED
                     YLTKDHTLPELLPRVLERVRRNRALRTALTEAERELVQAERLAAIGEMSVTLHHELNN
                     PLMAAMAEVEMMLPTASAEQRVGLEIVRTALQRMAERLRQAADLRRADSTDYLGGLRM
                     INLEQTAGGNGAYRGKALIYHPDQRVRRVISLLLRHAGFLVERCPSVAELQSSAAGPG
                     LTLVLVPSGPEGGPPLSGFIPAAVRTFAVVVLGQEAEALSRAAGADHVLPMPFDPATL
                     VGDILEAVANRNQANAVEDSRR"
     gene            complement(4718..5725)
                     /locus_tag="VGA78_12970"
     CDS             complement(4718..5725)
                     /locus_tag="VGA78_12970"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX9894833.1"
                     /translation="MTDTNLFAQQEHNRRRSTLLIVGFVLFFAWIGFGGDLAWYLGTR
                     DLPPESYHHVIPFTGMITTVIAGGMAWYSWRHGADRVLAATGAWELLEPVTEDHKRLR
                     NVVDEMAIASGLPSPRVWVVPDSDPNAFATGRDPATAHLAVTEGLLQHLDRDELQGVV
                     AHEMAHIRNLDVRLMTLLAATVGTIALKSDTLQRMLRYGFGRGGRRGGGRKGGNPLAL
                     VVLVAWLISLIFAPLIARLLAMSVSRKREFLADATGAQFTRNPMALAEALRKIDGASG
                     ATQAIARGAAHMCIVDPGERRMSAKGGSGMSVFASHPPIGERIARLQAMGYQPVEGGR
                     G"
     gene            complement(5722..6297)
                     /locus_tag="VGA78_12975"
     CDS             complement(5722..6297)
                     /locus_tag="VGA78_12975"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX9894834.1"
                     /translation="MGFVLLAVLALVVVWVIGAYNGLISLQNQVANAWKQIDVQLKRR
                     HDLIPNLVNAVKGAMDHERGTLEAVISARNRAVAAQGVAATAKAEGELTAALGRLFAL
                     AEAYPQIQATSNIRELQEELSSTENKVAFSRQLYNDVATQYNTKQAQFPTNLVAGLAK
                     ATPAELWQIEDAAHRQVPTVDLSARPPAPPA"
     gene            complement(6323..6988)
                     /locus_tag="VGA78_12980"
     CDS             complement(6323..6988)
                     /locus_tag="VGA78_12980"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX9894835.1"
                     /translation="MTIPLISPAPPAARDTLQTLRAYHALAPWSLRDLAALSGTLLEA
                     SGVVPVNVAARARPTERTIRFYVMKCLVDPPEGRGTAAVYRYRHLLQVLGIKLRQMDG
                     ASLDALAREFSGVTGDVLERRVATALGPGVPSPDELGALEGILPARGRSARALRPRMA
                     DAPAATQVRSTLVRRIVILPGAELVLEAGHPLFRQVGSEETIARVVAQALESLAEELS
                     LSR"
     gene            complement(7574..8197)
                     /locus_tag="VGA78_12985"
     CDS             complement(7574..8197)
                     /locus_tag="VGA78_12985"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX9894836.1"
                     /translation="MTRVGRTVFALVLVMAAGPVAAQRAFPAGHVSSGKLSFDAKATL
                     GAFSGTTNTVTGAMTAGLELREVRGWVEAPVSSLKTGNGLRDKDLNKSMETDTHPTMR
                     FDLESVSVQSESGDSAAVTLFGRFTIHGVKREVVVPARIHYQADGIRVQSDIPMNVKD
                     YGVTKLSKLLGTFKMNENIVVHIDVVFAPGEAPPSAAAPAEKPPPSD"
     gene            complement(8194..8589)
                     /locus_tag="VGA78_12990"
     CDS             complement(8194..8589)
                     /locus_tag="VGA78_12990"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9894837.1"
                     /translation="MPGLSILVVSQDPMRAREIADVLRQGGHSTVVQADAAAAAGDLS
                     AAALDVAIVDLSLPGLDRTALGRSLSPEVPNVPPEPLEAVERRHILATLLYTGGNKRR
                     AAHLLGIARSTLIQKVRRYELKLPEAPGE"
BASE COUNT         1550 a         3085 c         3175 g         1582 t
ORIGIN      
        1 tcctgggttt ccaccagggc gaccagcgtc gccccccgcc gcaccgtatc caccaggacc
       61 cggcgaaaca ctcccagtcg ccggagattg cgggcggtct cttccagcgc gtcggggcgc
      121 agcgcctggc cccgctcgaa cagcagctcc cgctcgatca cgtagggccg ggtggtgacg
      181 tggaaacggt tgaccagccg gggagcgaag aaggtcgcct cgctgtcggc aaagatgttg
      241 cgccgggtga gctcgatccg cccgacgacg ggaggcgggg gcgagacggt gctgtcctgc
      301 gcgggcagtg atgcggttcc cgcgatggtg gcgagaacga ggaagccagg gatctgccgt
      361 cgatgcatca ggggagcgag gagcgacgat cgggatcgat catcgatctc gatcgaggat
      421 caggcgagac tctcgagaat cttccagagc tcgatgggac tgaattcgtt gaaccgttgg
      481 accgcatcct ggtcgctcca ctccaggaag atccaggcgg tggtgcgggg accctgatcg
      541 gagacgaaat gaacccggcc gcccacaagc tcaccctgtg gccgtgtctc gagaaagacc
      601 ttccaattgg tgccgccacg ggacaggtcc cccatgtggc ggccggccgg tgcctcggtc
      661 acggtggtgc gaatggtctc catggactac cctagagaat gagggggaga ggggggtggg
      721 ggcaagggag ggagggaatg cagagtgccc aatgcccagt gccgattgca gaggtagggg
      781 tgaggtccga ttcccctctg caatgggcat tgggcactgg gcattctctg atcgattggg
      841 cagtcggccc cacttatatt ccttcccaca tgccggatag tctctgtccc gcgtgcgggg
      901 cttccaccac tgccggcggg cggttctgtc ataagtgcgg gcgggtactg acccggactt
      961 ccgagcccgc tcgcgcggtc tggatctcgg ccatcgtggt tactctcctc gcaaccgggg
     1021 gaaccatctt ccttctgcgg cagccctctc cgccggccga cgcacccgat cccggggtgg
     1081 cgcctcccaa tggtggtttc accagccagg ctcctgacat cagcaccctg tcggcccgcc
     1141 aggcgttcga ccggctgttc aaccgggtga tggccgccgc ggagcagggc gacagcgcca
     1201 ccgtggtccg tttcagcgag cacgcgctgg cggcctacac ccagctcgac tcggtggacg
     1261 ccgatgcacg ctaccacgcc gctgtcttgc aggcgcaggt gggacgctat gacgcggcgt
     1321 tggcgctggc cgataccata ttggcccgcg caccggggca tctcctggga tggctggtca
     1381 gggggaccgt ggccgagctt cgcaacgacc cggccgcgct cgctatcgcc cgccgggagt
     1441 tcctggccgc atgggcccgc gatccgggaa ccggtcgaag cgaatacctc gatcacaaac
     1501 cggcgctgga tcagttctac gccacgtcag tgaacggtga acggtgaaca gtgaacggta
     1561 acaaacaatc agctccgatg ggttcacgct tcctgtcgcc gttcaccgtt gactgttgac
     1621 tgttgactgt tgactgttca ccgttaagga cggttggacc gtgagaacca tccacgttgc
     1681 gcacagcccc gattccgacg acgcgttcat gttctacgcg ctggccgagg ggttggtcga
     1741 tactcccttt cgctacgtcc acgaactcgc cgacatcgag agtctcaacc ggcgcgctct
     1801 cgccggagag ctggaagtct cggccgtctc gattcacgcc tacgcgttgc tggccgaccg
     1861 ctatgcgctg ctcggctccg gctgctccat gggtgacggc tacgggcccc gcctggtctc
     1921 ccggctcccc cgtcccggtg acccgcgccc ggccgtcgcc ggccgacggg tcggtgtgcc
     1981 agggctgctg accacggcgt atctggccct caagctctat cagcccgcga tcgagccggt
     2041 ggtgatgcca ttcgatcaga tcgaggatgc ggtggaacgg ggcgaggtgg aggtgggact
     2101 cctgatccac gagggacagc tgacccatgg cgaccggggg ttgaacctgt gggaggacct
     2161 gggcgcgtgg tggcagcggg agagcgacct gccgctgccg ctgggcggca acgtggttcg
     2221 acgcgacctc ggtccggagg tcgtgcagca ggtcgcccgg gatgtgcgag ccagcgtgga
     2281 gtacgccctg gaccatcgcc cggccgcgct ggcccatgcc agccggttca accgcgggct
     2341 gtcggatgaa cgggcggacc aattcgtcgg gatgtacgtc aaccactgga ccgtggacta
     2401 cggtcccgtg ggccggcgcg ccgtgcgagc attactggat ctggcagccg accagggcct
     2461 ggtgccccgt gtctctgtcg agtttgcggg ttgactggcg ccgggtcgtt ccccaacgtt
     2521 gaccgacacc ctcgtgacgt cacttcttga tgcctcattc tgcgcctccg cccgcgccca
     2581 ttcgtgagcc ggaccgcggc ccggtcggta tcctcgtcgt agacgacgag gaaccaatcc
     2641 ggaatgcgct gcgccggttc ctggcgcagg agaaatacga ggtggtgacc gcggccaccg
     2701 gcgccgaggc cctggccgcg gtgggacgcc accgggtcgg ttgtgtgctg ctcgacttgc
     2761 gcctgcccga cgaacccggc accgatctgg tgccccagtt gctcgacgcc gatcccgacc
     2821 tggccattct ggtgctcacc gccgtgaacg atgccgcgac cgcggcgctc tgcctccaac
     2881 ggggtgccct cgactacctg gtgaagccgg tggacctggc cgacctgctc cgggcggtgc
     2941 agcgggtgct ccggcgacgc gatgcccggc tcgagagcca gcgcctcaac agcctgctgc
     3001 gggaagaggt ggccttgcgc accgccgagc tgcagcagga gcgggagagc ctgcagcggc
     3061 ttgcggtggc aacgctggag gcgctggtca acgcgctcga ggccaaggac cgccatctcc
     3121 ggggacactc ggcccgggtc gccgatctcg cggccaagct ggccactgcc agcggtatgc
     3181 cggaagagca ggtcgaaacc gtccgcaccg cgggccggct gcacgatatc ggcaagatcg
     3241 gtatccgcga gtcgatcctg aacaagcagg gcccgttgac cgacgacgag ttcgcccacg
     3301 tcaagaccca taccctggtc ggcgcccaga tcctggcccc gctgggccat ctggcggacg
     3361 tgatcggata cgtgcgaagc catcacgagc ggtgggacgg caagggctat cccgacggat
     3421 tggcggccga ggccattccg gtgggcgccc ggatcatcgg ggccgtggag atcttcgacg
     3481 cgctgaccac ctcccgcccc taccaggaaa ccatgagccc gcgccaggcg gttgagcgga
     3541 tggcggacct ggtcgggacc gtcatcgacc ccagcgtgca cgacgcgctc gaccgcgtcg
     3601 tcaatcgcaa gtgagcgatc gctctaccgt ctccctcctc ctgatcgagg acgacgcgtc
     3661 gatggcgcgc ctgatccgcc acctgctgga gctggacggc taccgccgga tccggcacgt
     3721 ctggagcgcg gaacaggcgg tgggtgcggc cgctgaggcc gacatcatcc tgctggacca
     3781 tcaactgccc gacgtccggg gaatggacct gcttccccgg ctgctgggcc ggccggatcc
     3841 tccctcggtg atcatggtca ccggccatgg cagcgaatcg ctcgccgcgg ccgcgctgcg
     3901 ccagggcgcc gaggattatc tcaccaagga ccataccctg cccgagctgc tgccccgggt
     3961 gctggagcgg gtccggcgca atcgggccct gcgcaccgcc ctgaccgagg cggagcgcga
     4021 gctggtgcag gcggaacggc tggccgccat cggcgagatg agcgtgacgc tgcatcacga
     4081 gctcaacaac ccgctcatgg cggccatggc agaggtcgag atgatgctgc cgaccgcgtc
     4141 ggccgagcag cgggtagggt tggagatcgt gcggacagcc ctgcagcgga tggcggagcg
     4201 gctgcgccag gccgccgacc tccgccgcgc cgactccacc gactacctgg gtggcctgcg
     4261 aatgatcaac ctggagcaga cggcaggcgg aaacggagcg taccggggca aagccctgat
     4321 ctatcatccg gatcagcggg tgcggcgggt gatttcgctc ctgctgagac acgccggctt
     4381 cctggtggaa cggtgtcctt cggtcgccga attacagagc agcgccgccg ggcccggcct
     4441 gaccctggtg ctggtgccct ccggcccgga ggggggccct cccctgagcg gcttcatccc
     4501 cgcggcggtc cggacgttcg ccgtggtggt gctggggcag gaggcggaag ccctctcgcg
     4561 cgcagcgggc gccgatcacg tgctgccgat gcccttcgat ccggcgacgc tggtggggga
     4621 catcctcgag gcggttgcga atcgaaatca ggcgaatgcc gtcgaggaca gcaggcggta
     4681 gccgcttcga ccgcctcgac accttcgacc ccttcgacta gcctcgaccc ccttcgaccg
     4741 gttgatagcc catcgcctgc aaccgggcga tgcgctctcc gatcgggggg tgggaagcaa
     4801 acacactcat gccgcttccg cccttggcgc tcatccgccg ttcccccgga tcgacgatgc
     4861 acatgtgagc ggcgccccgg gcgatggcct gggtggctcc cgatgccccg tcgatcttcc
     4921 gcagggcttc ggccaaggcc atggggttac gggtgaactg agctccggtg gcatcggcca
     4981 ggaattcgcg cttgcggctc acgctcatcg ccagcagccg agcaatcaac ggcgcgaaaa
     5041 tgagcgatat caaccacgcc accagcacca ccagcgccag cgggttccct cccttgcgcc
     5101 cgcccccacg gcggcccccg cgtccgaaac cgtaccgcag catccgttgc agcgtgtcgg
     5161 acttgagcgc gatggttccc acggtggccg ccaacagggt catgaggcgg acatcgaggt
     5221 tgcgaatgtg agccatctcg tgcgccacga caccctgcag ctcgtcgcgg tcgaggtgct
     5281 ggagcagccc ctcggttacg gcgaggtgcg cggtcgccgg atcccggccg gtcgcgaagg
     5341 cattgggatc tgagtccggc accacccaga cccgcgggct cggtagacct gacgcgatcg
     5401 ccatttcgtc gaccacgttg cgaagtcgct tgtgatcttc ggttaccggt tccagcagtt
     5461 cccacgcccc ggtcgcggcc agtacccgat cggccccatg ccgccaggaa taccaggcca
     5521 tcccgcccgc aatgacagtg gtgatcatcc ccgtgaaggg aatcacatgg tggtagctct
     5581 cgggcggcag gtcccgggtc cccaggtacc aggccagatc tcccccgaag ccgatccagg
     5641 cgaagaacag cacaaagccg acgatcagga gcgtcgatcg ccggcggttg tgttcctgtt
     5701 gcgcgaagag attggtgtcg gtcacgccgg cggcgcgggg ggccgcgccg acagatccac
     5761 cgtaggaacc tggcggtggg ccgcatcctc gatctgccac aattcggcgg gcgtggcctt
     5821 tgccaggccc gcgacgagat tggtggggaa ctgggcctgc ttggtgttgt actgggtggc
     5881 cacgtcgttg tagagctggc gcgagaaggc caccttgttc tcggtgctcg acagctcctc
     5941 ctgcaactcc cggatattgg aggtggcctg gatctggggg taggcctcgg ccagcgcgaa
     6001 caaccggccc agggcggcgg tcagctcccc ttcggcctta gcagtcgccg ccacaccctg
     6061 cgccgctacc gcccggttcc gggccgagat gaccgcctcg agggtgcccc gctcgtggtc
     6121 catggccccc ttcaccgcgt tgaccaggtt gggaatgagg tcgtgccttc gcttgagctg
     6181 cacgtcgatc tgcttccagg cattggcgac ctgattctgc aacgagatca gtccgttgta
     6241 ggcgccgatg acccacacga ccaccagcgc caggacggcg agcagcacga aacccatcgg
     6301 ggcctccgta agtcggtcgg agctaccggc tcagcgacag ctcttctgcc aggctctcga
     6361 gcgcctgggc gaccacccgg gcgatcgttt cctcggagcc gacctggcgg aacaggggat
     6421 ggccggcttc cagcaccagc tcggcgccgg gaaggatcac aatgcgtcgc accagcgtac
     6481 tgcgtacctg ggtcgcggcc ggagcgtcgg ccattcgcgg ccgcagagcc cgggccgaac
     6541 gaccgcgcgc cggcaggata ccctcgagcg cgcccagctc gtcgggcgac ggcacgcccg
     6601 gtcccagggc ggtggccact cgccgctcca gcacgtcgcc ggtgacgccg gagaattctc
     6661 gtgccagcgc atcgagcgat gctccatcca tctgccggag cttgatgccg agtacctgca
     6721 gcagatggcg gtagcggtac accgccgccg tgccacgccc ttcgggcggg tccaccaggc
     6781 acttcatgac gtagaaacgg atagtgcgtt cggtgggccg cgcgcgggcc gcgacattca
     6841 ccgggacgac gccgctggcc tccagcagcg tacccgacag ggccgcgaga tctcgcaggc
     6901 tccacggcgc cagcgcgtgg taggctcgaa gagtctgaag ggtgtcgcgc gccgcgggag
     6961 gcgcaggaga gataagcggg atggtcatcg ttactggcca tcaaattgac caggagacgc
     7021 cgctcgcgcc agaggtcagt tcctagtcac tggcgcggca ttgattgtga tcgccgtgaa
     7081 tgtcaagagc gcggcggatt ctcaacgcgc cggcgtgccg atcacgcccc gccgtattcg
     7141 gcatctggct cgcgtgatcg ggatcacgca gagtgaaatc gccgcctcca cctttgatcc
     7201 atgcgcggca cctcgctggt ggaatcggct gtcatcctcg tcatcgttgg catcgcagcg
     7261 ggactgagtg tgccgcgagc gattggcctc cgtgaccggc tcctggtgcg gaggcatgcg
     7321 gaggcggtca ttaccgcata tcagcgcgcc agactggcgg cactgctcgg ctccggcacg
     7381 gcgttgctcc gcatccagcc ggaccacatc ggtgtctggc gaatctatgg cgaggattca
     7441 acacttctct ggcagacctc gggaccggcc accgatgggg tgacggtcac gggaccgtcg
     7501 aggctggtct ttgccccggg cggtgtgacg atgggtgtgg ccaacggcag cttcgtcttg
     7561 tcgcgcggcg gggtcagtcg gacggtggtg gcttctcggc tggggcggct gcggatggcg
     7621 gtgcctcgcc gggtgcgaag accacgtcga tgtgaaccac gatgttctcg ttcatcttga
     7681 aggtgcccag cagcttggac aacttggtga ccccgtagtc cttcacgttc atgggaatgt
     7741 cgctctgcac ccggattccg tcggcctgat agtggatccg ggccggcacc accacttcac
     7801 gctttacccc atgaatcgtg aaccggccaa agagggtcac cgcggccgag tcgccactct
     7861 ccgactggac actcacgctc tcgagatcga atctcatggt cggatgagtg tcggtttcca
     7921 tcgacttgtt caggtccttg tcccgcaggc cgttgccggt cttcagcgat gacactggag
     7981 cctcgaccca cccgcgcact tctctcagct ccaatccggc ggtcatcgcg ccggtcacag
     8041 tgttggtggt ccccgagaaa gctcccagcg tggctttggc atcgaagctg agcttcccgg
     8101 acgagacatg accggcggga aaagcccgtt gagccgctac tggtccggcg gccatcacca
     8161 gcaccagggc gaacacggtg cgcccaacgc gagtcattct ccgggggctt cggggagctt
     8221 caactcgtag cggcggacct tctggatcaa cgtggagcgg gcgatgccca gcaggtgagc
     8281 cgcgcggcgt ttgttgccgc cggtgtagag caacgtcgcg aggatatgac ggcgctcgac
     8341 cgcttccaat ggctcgggcg ggacattggg cacttcgggg gagagtgagc gaccgagggc
     8401 ggttcggtcc agaccgggaa ggctcaggtc aacgatggcg acgtcgagcg ccgcggctga
     8461 gagatcaccg gccgcggcag cggcatcggc ttgcaccacc gtggagtgtc ctccttggcg
     8521 aaggacgtcc gcgatttcgc gggcgcgcat ggggtcctgg gagaccacca ggatcgagag
     8581 cccgggcatg tgatcgaaac tacaacccca ggccggactc ggccagcagg aggggtggga
     8641 gaagggagac gggaggcggc aagggcctca gtccccaaaa aaaggacggc cgtccagcct
     8701 ctcggctgca acggccgtcc cgcacacgga ccaactgaag tcggagcaat tgccgccgtt
     8761 cttctccagg tttgccaccg gtggctgttg accgtccggg aggacaaacg agggcttcag
     8821 tcctgatccc caggccggct ggccggccca cctggatcat ccgtgcgagc gctgcgggtc
     8881 aggtcgggtc gcggaccgac cttccgcact gcaccccgag gcgcaaaatc ggggtggctg
     8941 gagcacgcga ctggctccaa ccgtccggat agagtggcca ccggtatcgt cgaaacctcc
     9001 gatgcacgag gcatccttgg ctcctcctcc ggcgctctct ccgaaccgag acgatcgaaa
     9061 cagcccctga tgagttctgc ttcgttcgct tcgtggagcc aaagataggg acagcctgaa
     9121 atcgcgcaag tgcctgattt tattcgggtt acgcgatgca ataacgcgga gaatgtggac
     9181 ggggaactgc tttctggaca gaggattcga cgctgtcgtc acacgttgtg gaaatgtgta
     9241 tcaacatttg cacggctcac tggtcaggag actatgtcgc cagctcattc gtggtcctag
     9301 gacactgtat cgccaccgtc gatgcagtat gcgaacaccg ataccatgaa gggatcgatc
     9361 gagcgtctgg gggcactacg ggagggttgc gg
//
LOCUS       DASWKS010000456         4298 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2477797, whole genome shotgun sequence.
ACCESSION   DASWKS010000456 DASWKS010000000
VERSION     DASWKS010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4298
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2477797"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VGA78_12995"
     CDS             <1..224
                     /locus_tag="VGA78_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894838.1"
                     /translation="AVLPPGGNVIFPRLARTFNSETLADHLHRRYSTLVVPGKFFESP
                     RHIRLSFGCGPEKLARGLRNVSSALDDLS"
     gene            288..2492
                     /locus_tag="VGA78_13000"
     CDS             288..2492
                     /locus_tag="VGA78_13000"
                     /inference="COORDINATES: protein motif:HMM:NF011071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming)/trehalose-phosphatase"
                     /protein_id="HEX9894839.1"
                     /translation="MTRPLVVVSNRLPFAAQRDGDRVRYARAPGGLATAVDSALDEPG
                     SRWVGWSGLPEEELSAAGNPKFPEADGRLYIPVPLSRHEVARYYGHFANRTLWPTFHY
                     FLGRVSFDASAWTVYDRVNERFAQVTAREAPPDATIWVHDYQLLRTAHHLRRLKPNAR
                     IAFFLHIPFPSADVFRALPWSRPLLRGMLGADYIGFHTMVFVNHFFASVERLLGCETD
                     RDAMTVHYEGRMITLGVHPISVDFAVVDGLARQALASEPPSPSPTRLILGADRIDYTK
                     GILQRLLAVERLLERHPEHRGRIVFTQVAVPSRERVPEYSELKREVDEAVGRINGRFS
                     DHGWSPIRYLSRSLSPSVLAGLYARAEVALVTPLRDGMNLVSKEYVAAQVGEPGVLIL
                     SELAGAAEELQEAVLVNPFDIDGMAEALATALEMPQEERRARMSALRDRVKSNDVAAW
                     RTRFLESVDRAIVRARASAPTPVELFTRRIGPWLGERDRAAIFLDYDGTLTPIVDHPD
                     AASLDQAAQRALVALAGAPHLDVAVVSGRSLEDLRRRVPDAGITLIGNHGLEIEGPGL
                     HWHHPRAQEWAEALAQASSELGELGIRGAWVESKGGSLSWHVRSLPEESWPAALRRGA
                     AVLTERGLEALIGKAVVEGRPPLGWNKGRALLYVLQHRYGDDWPGRVRALYIGDDRTD
                     EDAFRSLRGIGRSIRVGEPGTVTEADHLLPDPAAVVRILEWLAAGGHLGLKA"
     gene            2489..>4298
                     /locus_tag="VGA78_13005"
     CDS             2489..>4298
                     /locus_tag="VGA78_13005"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX9894840.1"
                     /translation="MTGYLPIAGYGVIGDLHTAALIGRNGSIDWWCVPRFDSPSVFAA
                     LLDNRRGGAWSVGPEAPYTSEQRYLPGTNLLETNFHLDQGGLLTVSDFMPLGAQRGGK
                     AAIYRRVRGIRGLVPVIVRLEPRFSYGADPVRFHPRQSGLLATGGDREVLAFSATPGI
                     VWQLEEGAAVARFGLRPQDTMWLVLRHDEDEVLSIDALDPQATMDDTAHSWDNWLSKL
                     TYHGPFRQEVERSALALKLLQYHPSGAMVAAPTTSLPEWPGGERNWDYRFTWLRDSSY
                     VLYALNHLGFDSEAEAYLGFFKRVCRQSDARHLQILHQVDGAHHLSEQELTHLDGYGG
                     SRPVRIGNGAIDQFQLDIYGELLDTLYQGHRTRTPTEGVWLAIRRLVDWVAANWTTAD
                     YGIWESRREARHHVFSKIMAWCALDRGVRLARRHRLPADTAAWSRAAAAVREQVLNQG
                     WNPERQSFVQTYDAPDLDAALLAIPLVRFLSRTDPRVQSTLVAIRQELSAGPEELIYR
                     YRSPDGLAGEEGAFLVCSFWMVQNLALVGQLDEAERLFRLLLRRSGALGLFPEEIDPR
                     TGDFLGNYPLGLSHAALLNCAVTLERLKRSQAAGGRE"
BASE COUNT          660 a         1457 c         1452 g          729 t
ORIGIN      
        1 aggccgtcct gcccccgggt ggaaacgtga tcttcccccg tctcgctcgg accttcaaca
       61 gcgaaaccct cgcggatcat ctgcaccgcc ggtactccac cctggtggtt ccgggaaagt
      121 tcttcgagtc gccccgtcac atccggctga gctttggctg cggccccgaa aagctggccc
      181 gcggactccg taacgtctcg agcgcgctcg acgatctgag ctgataaatg ggccaggcgt
      241 cttcgtgacc ggggacgcta cccttcgctc ctgttagttt gccagacatg acccgccctc
      301 tggttgtcgt cagcaaccga ctcccgtttg cggctcaacg ggatggggac cgcgtcaggt
      361 atgcccgggc gcccggagga ttggcgaccg cggtcgactc ggcgctggat gagccgggca
      421 gccggtgggt cgggtggtcg ggattacccg aggaagagct gagcgcggcc gggaatccca
      481 agttccccga ggccgacgga agactctaca tcccggtgcc gctcagccgg cacgaagtgg
      541 cccgctacta cggtcacttc gccaaccgaa ctctgtggcc caccttccac tacttcctgg
      601 gccgggtgag cttcgacgcc tcggcctgga ccgtctacga ccgggtcaac gagcgtttcg
      661 cgcaggtcac agcccgggaa gccccacccg acgccaccat ctgggttcac gactaccagt
      721 tgcttcggac cgcgcaccat ctgcggcggc tcaagccgaa cgcccgaatc gccttcttcc
      781 ttcacatccc gttcccctcg gccgacgtat tccgggcctt gccctggagc cgtcccttgc
      841 tgcgcggcat gctcggcgcg gactacatcg gcttccacac catggtgttc gtcaaccatt
      901 tcttcgccag tgtcgaacgg ctgctggggt gcgagaccga ccgcgatgcc atgacggtcc
      961 actacgaagg ccggatgatc acgctggggg tgcacccgat cagtgtcgat ttcgcggtgg
     1021 tggatgggct ggcccgtcag gcactggcca gtgaaccgcc gtccccctcc cccacccggc
     1081 tgatcctcgg cgccgatcgg atcgactata ccaagggcat cctccagcgc ctcctggcgg
     1141 tggaacggct gctggaacgg catcccgagc atcggggacg catcgtcttc acccaggtgg
     1201 ccgtgccgag ccgggagcgg gtcccggaat acagcgagct caagcgcgaa gtcgacgaag
     1261 cggtgggccg gatcaacggg cgcttctccg atcacggctg gtcacccatc cgctatctca
     1321 gccgttcgct cagtccgtcg gtcctggccg gcctctacgc ccgggccgag gtggcgttgg
     1381 tgacgccgtt gcgcgatggc atgaacctgg tctccaagga gtatgtcgcc gcccaggtgg
     1441 gcgagccggg cgtgctgatc ctgtcggagc tggccggcgc ggcggaagag ctgcaggagg
     1501 cggtgctggt caacccgttt gacatcgacg gaatggccga ggcgctggcc accgcgctgg
     1561 agatgccgca ggaggagcgc cgggcccgca tgtcggcctt gcgcgaccgg gtgaaaagca
     1621 acgacgtggc ggcgtggcgc acccgctttc tcgagtcggt cgaccgggcc atcgtccggg
     1681 cccgcgcctc cgcgcctacc ccggtggaac tgttcacccg ccgcatcgga ccctggctgg
     1741 gcgaacggga ccgcgcggcg atttttctcg attacgacgg gaccctcact ccgatcgtgg
     1801 accaccccga cgccgccagc ctcgatcagg cggcgcagcg ggccctggtg gcgctggccg
     1861 gagcgcccca cctcgatgtg gccgtcgtaa gcgggcgcag tctggaggat ctccgccggc
     1921 gggtaccgga tgccgggatc accctgatcg gcaatcacgg actcgagatc gaaggccccg
     1981 gtcttcattg gcaccatccg cgcgctcagg aatgggccga agcgttggcc caggcatcca
     2041 gtgagcttgg tgagctcggg attcgcggcg cctgggtcga gtccaaaggc ggcagcttgt
     2101 cgtggcacgt ccggtccttg ccggaggaat cctggcccgc ggctctacga cgcggcgccg
     2161 ctgtcctgac ggagcggggc ctggaggcgc tgatcggcaa ggcggtggtc gaaggacgcc
     2221 cgccgctggg atggaacaag gggcgggctc tgctctacgt cctgcagcac cgctatggcg
     2281 acgactggcc gggccgggtg cgcgcccttt acatcggcga cgaccgcacc gatgaagacg
     2341 cgtttcgttc gctgcgcggg atcggccgct ccatccgggt cggcgagccg ggtacggtga
     2401 ccgaggccga tcacctgctg cccgacccgg ccgcggtggt gcggatcctc gagtggctgg
     2461 cggcgggtgg tcacctgggc ctcaaggcgt gaccggctac ctcccgatcg ccggctatgg
     2521 cgtcatcggc gacctccaca cggccgcact gataggacgc aacggctcga tcgactggtg
     2581 gtgcgtccct cgcttcgatt ccccctcggt ctttgccgcc ctgctcgaca accgtcgggg
     2641 cggcgcctgg agcgtcggtc cggaggcccc gtacaccagc gagcagcgct atctccccgg
     2701 caccaacctg ctggagacca atttccacct ggaccagggc gggctgctca cggtgagcga
     2761 cttcatgccc ctgggagcgc aacggggagg caaggccgcg atctaccgcc gggtacgggg
     2821 gatccggggc ttggttccgg tcatcgtgcg attggagccc cgtttttcct acggggccga
     2881 cccggtgcga tttcaccccc ggcaatccgg gctgctcgcg accggtggcg accgggaagt
     2941 actcgccttc agcgccacgc ccggaatcgt gtggcagctc gaagagggag cggccgtggc
     3001 gcggttcggg cttcggcccc aggacacgat gtggctggtg ctccggcatg acgaggacga
     3061 ggtgctgtcc atcgacgcgc tcgatcccca ggcgacgatg gacgataccg cgcattcgtg
     3121 ggacaactgg ctctccaagc tcacctacca cggccccttc cggcaggaag tggagcggag
     3181 cgccctggcc ctcaagctgc tgcagtacca tccctccggc gccatggtcg cggcccccac
     3241 cacctcgctg ccggaatggc ccggcggcga gcgcaactgg gactatcgct tcacctggct
     3301 ccgggattcg agctacgtcc tctatgcgct caatcacctg ggattcgact ccgaggccga
     3361 agcctatctc ggttttttca agcgagtctg ccggcaatcg gacgcccgcc acctccagat
     3421 tctgcaccag gtcgatggag cccatcactt gtcggagcag gagctgaccc acctcgacgg
     3481 ctatggcggg tcgcgcccgg tccggatcgg caacggagcc atcgatcagt tccagctcga
     3541 catctacggg gagctgctgg acacgctgta ccaggggcat cgcacccgga cgccgaccga
     3601 gggcgtgtgg ctggccatcc gccggctggt ggactgggtc gccgccaact ggaccacggc
     3661 cgactatggg atctgggagt cgcggcgaga ggcccgccac catgtcttca gcaagatcat
     3721 ggcatggtgc gctctggatc ggggggtacg gctggcccgg cggcacaggc tgccggccga
     3781 cacggccgcc tggtcccgag cggcagcggc ggtgcgagag caggtgctga accagggctg
     3841 gaatccggag cggcagagct tcgtgcagac ctatgatgca cccgatctgg atgccgctct
     3901 gctggcgatt cccctggtcc ggtttctctc gagaaccgac ccccgggttc aatccacgct
     3961 cgtggcgatc cgccaggaac tgtcggccgg gccggaggag ttgatctatc gctaccgttc
     4021 acccgacggc ctggcgggtg aggaaggcgc cttcctggtg tgttcgttct ggatggtaca
     4081 gaacctggca ctggtggggc agctggacga agccgaacgg ttgttccgtc tgctgctcag
     4141 acgcagcgga gccctcggcc tgtttccgga ggagatcgat ccccggacgg gagattttct
     4201 cggcaactac ccgctgggac tgtcccacgc ggcgctgctc aactgcgcgg tgacgctgga
     4261 gcggctgaag cgcagccagg cggcaggagg cagggagc
//
LOCUS       DASWKS010000457         2046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1341197, whole genome shotgun sequence.
ACCESSION   DASWKS010000457 DASWKS010000000
VERSION     DASWKS010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1341197"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VGA78_13010"
     CDS             <1..426
                     /locus_tag="VGA78_13010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894841.1"
                     /translation="DVTCLVNRSQPLSLEPECYDAEASATVLPIQRFQTEQRIAGTPK
                     QAIDARVDERLRSGEFRLPRRPALVYMMSAEQVLYNDNGQKVGPWLPHLMWYFPYMKA
                     ADLGMPAANATISFIGEGTSLSAVVVPVRTSVKLDSASP"
     gene            426..959
                     /locus_tag="VGA78_13015"
     CDS             426..959
                     /locus_tag="VGA78_13015"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9894842.1"
                     /translation="MSGADDQLDREAVTAFLASRSEPAFRVLYHRHAPSLYGLLLRLT
                     GGNAALAQDLMQEAWLRAVAGLDRFAWQSKLGTWLHGIGVNCWREWLRDTRRDALMLA
                     DESPDQIEADLPASVDGVALAQAVDSLPEGYRTVLVLHDIEGYAHDEIAALLGIAPGT
                     SKSQLSRARTALKRSLR"
     gene            956..1492
                     /locus_tag="VGA78_13020"
     CDS             956..1492
                     /locus_tag="VGA78_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894843.1"
                     /translation="MTEQPDRDPGSSLGRLAQNVDPASAAYERLVSRLRARGEIRRSS
                     MRPWLLIGAGLAAAALVLAVLNRPVLEGPQYLLLLEEPSAFRAATSAAEQTARVTEYS
                     AWAQRLRREDRLVSAGELEPRGSVVGPEGVQAGESITAPTGYFLIRAISLQDAERLAQ
                     GSPHIQYGGSVVVRPVVH"
     gene            complement(1602..>2046)
                     /locus_tag="VGA78_13025"
     CDS             complement(1602..>2046)
                     /locus_tag="VGA78_13025"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9894844.1"
                     /translation="VLWHGGLSGAYLIMLGTGALLTLVFTAVAFYLAVRIQDRAMGLG
                     AAIVAWLGLVVVYDGLILLGITLFSQWPLETPTLIATFLNPVDLGRVLLLFQFDLSAL
                     MGYTGAVFERFFSGSVGTALAAGTLLLWTVIPLLLALRRFQRKDW"
BASE COUNT          362 a          711 c          648 g          325 t
ORIGIN      
        1 gacgtgacct gcctggtgaa tcggagccag cccctgagcc tcgagccgga gtgctacgac
       61 gcggaagcct ctgcgaccgt cctgccgatc cagcgcttcc agaccgagca gcggatcgcc
      121 ggtacaccga agcaggcgat cgacgcccgg gtggatgagc ggctccggtc gggcgagttc
      181 cggctgcccc gccggccggc cctggtgtac atgatgtcgg ccgagcaggt gctctataac
      241 gacaacggcc agaaggtcgg cccctggctg ccccacctca tgtggtattt cccatacatg
      301 aaagcagccg acctgggaat gcctgcagcc aacgccacca tctccttcat cggcgagggc
      361 acttccctct cggccgtggt ggtaccggtc cgcacttcgg tgaaactcga ctccgcatcg
      421 ccttgatgag cggggcggac gaccagctcg atcgggaggc ggtaaccgcc ttcctcgcct
      481 cccggtcgga gccggcgttc cgggtgctct atcaccgcca cgcgccgtcg ctctacggtc
      541 tgttgctccg gctcacgggc ggcaacgccg cgctggccca ggacctgatg caggaagcgt
      601 ggctccgcgc agtcgccgga ctggaccggt tcgcctggca gtcgaagctc ggaacctggc
      661 tgcacggaat cggagtgaac tgctggcggg aatggctgcg cgatacccgg cgcgacgcgc
      721 tgatgctggc ggacgagtct cccgaccaga tcgaggccga cctgccagca tcggtcgatg
      781 gggtcgcgct ggctcaggcg gtcgattcgc tgccggaagg atatcgtacc gtgctcgtcc
      841 tccacgatat cgagggttat gcccacgacg agatcgccgc tctcctgggt atcgctcccg
      901 gcacctccaa gagccagttg tcgcgtgccc gcaccgcgct caaaaggagc ctccgatgac
      961 cgaacagccc gaccgcgacc cggggtcgtc gctgggacga ctggcccaga acgtcgatcc
     1021 ggcttcggcc gcctatgagc ggctggtctc ccggcttcgc gctcggggcg agatccgccg
     1081 gtcctcgatg cgcccctggc tgctgatcgg agccgggctg gccgccgcgg cgctggtcct
     1141 ggcggtcctg aaccggccgg ttctcgaagg accccaatac ctgctgctgc tggaagagcc
     1201 ctccgccttt cgcgccgcca ctagcgccgc cgagcagacc gcccgggtga ccgaatactc
     1261 ggcctgggcc cagcgactcc gccgggagga tcgcctggtt tcggcgggag agctcgaacc
     1321 acgcggctcg gtggtgggcc cggaaggcgt gcaggcgggc gagtccatca cggcacccac
     1381 gggctacttt ctcattcgcg ccatttcact gcaggacgcg gagcgcctgg cccagggatc
     1441 gccccatatc cagtatggag gaagcgtggt ggtgcggccg gtggtgcact gaaccaccca
     1501 ttgacgattg acaattgacg atttctgatt gcatcaaccc acatctccgc gagacgcaat
     1561 tgtcaatttg ttcaattgtc aatcgtcaat gtcaacggac ctcaccagtc tttccgctgg
     1621 aatcgacgca gggcgagcag cagcgggatc acggtccaga gcagcagcgt tccggccgcc
     1681 agcgccgtcc cgacgctccc gctgaagaac cgctcgaaca ccgcgccggt gtaccccatc
     1741 agagccgaca ggtcgaattg gaacagcagc agcacccggc ccaggtccac cgggttcagg
     1801 aaggtcgcga tcagcgtggg ggtctcgagc ggccactgcg agaacagagt gatcccgagc
     1861 aggatcagcc cgtcatacac caccaccagg cccagccacg ccacaatggc ggcacccagg
     1921 cccatcgccc gatcctgaat ccgaaccgcg agatagaacg ccaccgcggt gaacaccagt
     1981 gtaagcagcg cgccggtgcc caacatgatc agataggctc cgctcagacc gccatgccac
     2041 agcacc
//
LOCUS       DASWKS010000458         2220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3550953, whole genome shotgun sequence.
ACCESSION   DASWKS010000458 DASWKS010000000
VERSION     DASWKS010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3550953"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VGA78_13030"
     CDS             complement(<1..279)
                     /locus_tag="VGA78_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum hydroxylase"
                     /protein_id="HEX9894845.1"
                     /translation="MVLVRGGGDLATGVAARLWRSGFWVVITEIEQPLAVRRLVALAE
                     AVYARELVIEDLNARRAENVPGVQLALRQGVIPVLVDPEADCRSELRPA"
     gene            complement(352..>2220)
                     /locus_tag="VGA78_13035"
     CDS             complement(352..>2220)
                     /locus_tag="VGA78_13035"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9894846.1"
                     /translation="RRIEVDYEDLPIVIDVLAARQAGAPLLHPDRESNVFWHNQIRKG
                     DIAKGFAAAAVVIESEYRTPAQEHAFLQPEAGLAYLDDEGRVTVEVAGQWTHEDQEQI
                     AHALGLPREQVRVRYPAIGGAFGGREDMSVQIVLALAAWRLHQRGIDRPVKIIWSREE
                     SILGHHKRHRYVIRSKWGASREGKLLAAEVEVIQDGGAYAYTSTKVLGNSTLMCTGPY
                     EIPNVKVDAYSVYTNHIPGGAFRGFGGPQAAYSAELQMNKLAEALGIDAVEIRMGNLL
                     KEGALLSVGTALPKGVSIGKVVEGCAEHAGWTHTGEGWQRPSRQALGAPAEPHLRRGI
                     GVACGFKNVGFSFGHPEQCWATIELHGGAEIEQVVLRHAGAEVGQGAHTAMAQMAAEA
                     VGVPLDKVRIVASDTATSENSGSASASRMTFMAGNAIRGAVEAAMLKWRDEDRPAIAS
                     YQYLPPPTEPYDPVTGTTRPNFAYGYVAEAATVEVDTETGALRILKVVCADDVGRVVN
                     PQGVRGQIEGGVVQAAGYAILEDFREDGGRVQTGLLSNYLIPGVLDIPDRIESVILEY
                     EDPLGPWGVRGMAEMPFIPLTPAVVSAVHDALGIWFDEFPLTPERVFWGLHAGRGE"
BASE COUNT          367 a          801 c          671 g          381 t
ORIGIN      
        1 ggccggcctc agctcactcc ggcagtccgc ctcaggatcc accagtacgg gaatcacgcc
       61 ctgcctcaac gcaagctgca ccccggggac gttctccgct cggcgggcgt tcaggtcctc
      121 gatcacgagt tcacgcgcat aaaccgcttc ggccagagcc accagccgcc ggacggccag
      181 gggctgctcg atctcggtga tcacaaccca gaatccactt cgccacagcc gggccgcgac
      241 cccggtggcc aggtcgccgc cgccgcgcac gagcaccaac ggtggagaat tgctcaactt
      301 gattgcaggc cgagaggtgg aagcagtcgg ccggaggcta tgcgcggggg attattcccc
      361 acggcctgcg tgcagacccc agaacacccg ctccggcgtc aacggaaatt cgtcgaacca
      421 gattcccaac gcatcatgga ccgcgcttac cacggccggt gtcagcggaa tgaagggcat
      481 ttctgccatg ccgcgcacac cccaggggcc gagcgggtcc tcgtactcca ggatgaccga
      541 ctctatccgg tccggaatgt ccaggactcc ggggatcagg taattcgaga gtaggccggt
      601 ttgtacccgg ccgccgtctt cgcggaaatc ttccagaatt gcgtagccgg cggcctgcac
      661 cacgccgccc tcgatttgac cgcgcactcc ctgcgggttg accacccggc cgacatcgtc
      721 agcgcacacc accttcagaa tccgcagcgc accggtctcg gtgtcgacct cgaccgtggc
      781 cgcctccgcc acgtagccgt aagcgaagtt gggccgggtc gtgccagtca ccggatcata
      841 gggttcggtc ggtggaggca ggtattggta agaggcaatc gccggtcgat cctcgtcgcg
      901 ccacttcagc atcgcggctt cgaccgcgcc ccggatcgcg ttgcccgcca tgaaggtcat
      961 ccgggaggcg gaggccgaac cgctgttctc gctggtcgcg gtgtcggagg cgacaattcg
     1021 caccttgtcc aacggaacac cgaccgcctc ggccgccatc tgagccatgg ccgtgtgagc
     1081 accctgcccc acctcggccc cggcgtggcg caggacgact tgctcaattt cggccccgcc
     1141 gtggagctcg atggtcgccc aacactgctc gggatggcca aaagagaatc cgacgttctt
     1201 gaatccgcag gccaccccga tcccccgccg caggtggggc tccgccggcg cacccaatgc
     1261 ctggcgcgac ggccgctgcc aaccctcccc ggtgtgggtc caacccgcgt gttcggcgca
     1321 gccctccacg accttgccga tgctaacgcc cttaggcagc gcggtgccca ccgagagcaa
     1381 ggccccttcc tttaacaggt tgcccatccg gatctcgacg gcatcgatcc ctagcgcctc
     1441 ggccagcttg ttcatctgca gttcagcgga gtaggcggcc tgcggtccac cgaacccgcg
     1501 gaaggcgccg cccgggatgt gattagtgta gaccgagtag gcgtcgacct tgacgttcgg
     1561 gatctcgtac ggtccggtgc acatcagggt cgagttccca agcaccttgg tggaagtgta
     1621 ggcataggcc ccgccgtcct ggattacctc cacttcggcc gccagcagct tcccctcccg
     1681 gctggcgccc catttcgagc ggatcacgta gcgatgccgc ttgtgatggc cgaggatcga
     1741 ctcttcccgc gaccagatga tcttgaccgg ccggtcgatc ccccgctggt gcagccgcca
     1801 ggcggccagt gccagcacga tctggaccga catgtcctcc cgtccgccga aggcgccgcc
     1861 gatcgccggg tacctcaccc gcacctgctc ccggggcaag ccgagcgcgt gggcgatctg
     1921 ctcctgatcc tcgtgggtcc actgtccggc gacctcgacc gtcacccgcc cctcatcgtc
     1981 gaggtaggcc agcccggctt ccggctgcag gaacgcatgc tcctgggctg gggtccggta
     2041 ttcactctcg atgaccaccg ccgcggccgc gaagcctttg gcgatgtctc ctttccggat
     2101 ctgattgtgc cagaacacgt tgctttcccg atccggatgc agcagcgggg cgcctgcttg
     2161 cctggccgcc aggacatcga tcacgatcgg caggtcctca tagtcgacct caatccgccg
//
LOCUS       DASWKS010000459         9779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2105874, whole genome shotgun sequence.
ACCESSION   DASWKS010000459 DASWKS010000000
VERSION     DASWKS010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9779
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2105874"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VGA78_13040"
     CDS             <1..402
                     /locus_tag="VGA78_13040"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894847.1"
                     /translation="QVSHPFVSNEEIPDRSDYPPVDERAPGQLVAAGVKVALASFSRA
                     FGTLAPAGTGKWLLLDGSIAAGYGMPESEILKAVTLSPAEILGVADRVGSLAVGKDAD
                     VLVLDGPPLSIKTWVDRVYVNGELVHQRGKP"
     gene            441..2492
                     /locus_tag="VGA78_13045"
     CDS             441..2492
                     /locus_tag="VGA78_13045"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylase"
                     /protein_id="HEX9894848.1"
                     /translation="MRRILLLLLCAGCAEPSAEILWDRWGVPHVYGAGETDLFRGFGY
                     AQMRSHGDLLLKLYGEARGRAAEYWGESYLAEDLYVRTMGIPARSVRWYQEQEPGFRA
                     ALDGFAEGINRFAREHPDQLTDSLEVVLPITATDVLAHTQRVIHFTFVHGIERIAALV
                     SGGSNTWAIGPSRSAGGHAMLLANPHLPWADFFLFYEAHLVGAGADLYGATLVGFPVL
                     AIGFNPDLGWSHTVNTYDGSDSYRLTPAETGYRWDGAARAFELSRDSLRIKGADGTLR
                     DSAITIRHSVHGPVVPSADTALIAVRVAGLDQPGTLKQWWDMGKARNLGEFEEALRTL
                     QIPMFNVMYADREGHILYQFGGRVPVRPCCDVEYWAGTVPGDTSGTLWDRTLLYEQLP
                     RLLDPPNGWLQNANDPPWTSTVPTHLRPDSFPPWLSPRFMHFRAQRSARMLQADSSIT
                     FEELVAYKHSTRMELADRILDGLIGAARASGRPGAKEAAEVLERWDRQARPESRGAVL
                     FALWAFETAGDNPGRPPLFAARWTLDSAITTPNGLANPRAAVAALERVAQTVKTRFGA
                     LDVPWGDVMRIRYGGRDLPGDGAPGDPLGVFRVAGYAPARDGKFRLTFGDTYYATVEF
                     GPTVRAKVLLAYGNSTQPGSTHFGDQIELFVKQQMRDPWRTRPEIEANLELRETVTGK
                     Q"
     gene            complement(2608..4425)
                     /locus_tag="VGA78_13050"
     CDS             complement(2608..4425)
                     /locus_tag="VGA78_13050"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9894849.1"
                     /translation="MPPIRALVATAALAATSVLQAQAGPFADCRPTPPDTSVRAVLSA
                     GFIPMPDGVRLAADLMLPARLTAGTRLPAVLTATRYWRGVEGASPSREALDWVRRGYA
                     FVSVDVRGTGASFGSWKYPWSRGEVRDLGDVIRWISAQPWSDGNVGAIGTSYTANTAQ
                     LAAATAGKPLKAVVPRFMDFDVWADLVSPGGLINEFMIREWGRAIAAMDRNAGTGQAS
                     RGVRPVNGDSGRPLLALALRDHEANPPLHEAALKAIYRDQVVPEWGASSDDYSAFRWQ
                     DPIERARVPIFGWASWYDAGTANGALSRWMTWRSPQFLVIGPWSHGGGHHASPFPAPD
                     APTDPTAAIQQGASVCWFDRWLKRRTTGPEPGRITYYTVGEERWKTTTRWPLPGSRME
                     RWYLGPQSSLTRTAPADSESDGYEVDFQTSTGTQNRWYTQMGGGDVVYPDRVEADRRL
                     LTYTSAPLERDLEVTGNAIMTLRLTTSAADAAFFVYLEDVAPDGRVTYVTEGQLRGIH
                     RLVTAPPYRVLYPYHSFRERDAAPMTPGALSEIRFGLLPTSVLFQRGHRIRLALAGAD
                     KDTFARVPADGAVTWWVSRTASAPSYVELPVVPRPNGKQ"
     gene            complement(4425..5213)
                     /locus_tag="VGA78_13055"
     CDS             complement(4425..5213)
                     /locus_tag="VGA78_13055"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX9894850.1"
                     /translation="MSDDVLRYREEGLVGVLTINRPDVLNAIDHGMVRRLGELLEGTT
                     QPQRLRALVITGAGRAFSAGHDLRQPPAGADEPVARVHEYLTELQRLTTRLLDHPAII
                     IAAINGPAVGMAAELCVAADLRLAAEEAYLLFPEVRRALFETNGVMYLLPRAVGQARA
                     SDWLLTGRRIPAGELLAAGFVSRVLPAAELLPAALEMAEEIAASAPRSIRLVKRLLQR
                     SWQSDLTSMLLAEVDGVVETISSPDLAEGLRAFLEKRDPRYTGA"
     gene            complement(5206..6795)
                     /locus_tag="VGA78_13060"
     CDS             complement(5206..6795)
                     /locus_tag="VGA78_13060"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9894851.1"
                     /translation="MTHWTSVPHLLRDRARTHGGREALRFEGASLSLAGLDAAASRWA
                     YAFEGLGIRRGDRVALILPNGLDVPAAWLGAAAAEAVVVPVNYTYRTADLQHVLADSG
                     ASIAVTSAERATDLLAARAHCPELRMVAVNDPVAPPGTESLVERLEAAPPGRDLPALV
                     PNDLVTLQYTSGTTGFPKGCMLSHAYWLELGNAAVRFGRLTPDDVILTAGPFYYMDPM
                     WNLVAGLIAGAPLVLLPRFSASTFWRRIRDEGVTFFYCLGTMPLLLLKQPEQPDLERG
                     HRVRAVLCSGIAPQLHPRFESRWGCPWREVYGTTEIGAGLMVPLEDGESVGSGAMGAP
                     LPHREARVVDPEHGGEIIDGGIGELQLRGPAMMSGYWRHSEATARFFQDGWARTGDLV
                     YRDARGYFHLLGRLKDMIRRGGENIAAAEVEAVLCEHPAVRAAACVPVPDPDRGEEVK
                     AFVQLVSGVTPDDAPPAVLVDFVRQRLAPFKVPRFIEYVESFPMTPSERIAKHRLLAA
                     RADQRAGAWDAAAGQWAPIHE"
     gene            6853..8184
                     /locus_tag="VGA78_13065"
     CDS             6853..8184
                     /locus_tag="VGA78_13065"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX9894852.1"
                     /translation="MNQVPLRRQVGLAGAVFTLVGYVIGASIFVLPGQLGARAGPALV
                     VSYLLAALLAGLACLAAAHIGSQLPVSGAIYVAVSRNVSPRAGFLVLWAILASVTVGV
                     PVVAYGLADYLWYFVPGLARLPVALMVVTIFGLINLLPVRGSVLVQTVLTGAFLLLLY
                     GFGWQAVRQVDAGRFSPFFANGIGPVLGAAVGAYFSFTGFMALANIGEEIKTPGRTLP
                     RALVLSFIVVTVAYLLTAVAVTGLLEWRTLADVPAPLATAAETFLPSWAVGLISLTAI
                     LAAATTVHGVLLVHSRDVYALARDRVFPPLIGWVHPVTRIPAAAVLVLTGLALLGVLA
                     GAALLDYALLAVLGVMFMQVGAGVALLRMPSYSSPGRFALRGKPRRTVGIGLIVTSGS
                     FALVGSLERPAVALVFAVVMATGLLYYSARRRALAARGQHLDELFAHSLDS"
     gene            8181..9446
                     /locus_tag="VGA78_13070"
     CDS             8181..9446
                     /locus_tag="VGA78_13070"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX9894853.1"
                     /translation="MIRILPPLCLMLATASTAVGQTDANLELARRVLRTTPLIDGHND
                     LPWAIRESPEARGQVESYDLRGRAPGHTDLARLRAGILGGQFWSVYIPGEIRDSGYAR
                     VQLEQIDIGRRIIERYPDAFQWALTSDGMREAFAAGRIGSVLGMEGGHAIENSLGALR
                     AYYDMGVRYLTLTHNVTLDWADAALDSVRHGGLTRFGEEVVREMNRLGMLVDLSHTSP
                     ATMSDVLNVAAAPVMFSHSSARALVDHPRNVPDSILRRLPANGGVVMVTFVTSFVSKA
                     SKDHGDRRAATERALRQRLGPDTAAVTRELSGWDRQNPPPKVRLSEVADHIDHVRQVA
                     GVDHVGIGSDFDGISEVIEGLEDVSTFPALFAELARRGWTEADLRKLAGENILRVMSR
                     AQDVSMRLRRERPPSNRTILELDGRPRTT"
     gene            9451..>9779
                     /locus_tag="VGA78_13075"
     CDS             9451..>9779
                     /locus_tag="VGA78_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894854.1"
                     /translation="MPAISVVSVIAGAAFVMALAMPFHRYRRLAAGLVIAGLGAASLQ
                     VGLGTDRVDALVQLARTAAERDRWFLRMGVGLMLAGGAAALALALLPARSGAPGTPSM
                     PLTLQRGG"
BASE COUNT         1479 a         3288 c         3399 g         1613 t
ORIGIN      
        1 caggtctctc acccgttcgt cagtaacgaa gagattcccg accggagcga ctatccccca
       61 gtggacgaac gggcgcccgg gcagctggtc gcggccggcg tcaaggtagc gctcgccagc
      121 ttctcccgtg ccttcggcac cctggcgccc gcgggcaccg ggaagtggct gttgctcgat
      181 ggttcgatcg cggccgggta cggcatgccg gaaagcgaaa tcctcaaggc cgtcaccttg
      241 agcccggccg agatcctggg agtggccgat cgggtcggat cgctcgcggt gggcaaggac
      301 gccgacgtgc tggtcctgga cggcccaccc ctcagcatca agacctgggt cgaccgggtg
      361 tacgtgaacg gtgaactggt ccatcaacgc gggaagcctt agacagtgaa cggtgaacgg
      421 tgaacagtga acggtgacgc gtgaggcgga ttctcctact cctgctctgc gccggctgtg
      481 ccgagccgag cgccgagatt ctgtgggatc ggtggggcgt gccacacgtg tatggtgccg
      541 gagaaaccga tttgttccgc ggtttcgggt atgcccagat gcgcagccac ggtgatctcc
      601 tgctcaagct ctatggggaa gcacggggcc gcgccgccga gtactggggc gaatcctacc
      661 tggccgagga cctctacgtc cggaccatgg gaatcccggc tcgctcggtc cgctggtacc
      721 aggagcagga gccgggcttt cgggccgcgc tcgatgggtt cgccgagggc atcaaccgat
      781 ttgcccggga acatccggac cagctgaccg actccctcga agtcgtgctg cccattaccg
      841 cgaccgatgt gctggcccat acccaacggg tcattcactt caccttcgtg cacgggatcg
      901 aacggatcgc ggcgctggtg tcggggggct ccaatacctg ggcgatcggg ccgtcgcgct
      961 ccgcgggcgg ccacgccatg ctgctggcca atccccatct gccctgggcg gatttctttc
     1021 tgttctacga agcccacctg gtgggtgccg gcgccgacct gtacggcgcc acgctggtgg
     1081 ggtttccggt cctggcgatc gggttcaacc ccgatctggg gtggtcgcac accgtcaaca
     1141 cctacgatgg ttccgacagt tatcggctga cgccggcgga gaccggctac cgctgggatg
     1201 gtgcggcccg agcctttgag ctgagccgcg attcacttcg catcaagggc gcggatggaa
     1261 ccctgcggga cagtgccatc accatccgtc actcggtcca cgggccggtg gtaccgtcgg
     1321 ccgacaccgc gctgatcgcg gtgcgggtag ccgggctgga ccagccgggg accttgaagc
     1381 agtggtggga catgggaaag gcgcgcaatc tcggggaatt cgaggaggcg cttcgcaccc
     1441 ttcagatccc gatgttcaac gtgatgtacg ccgatcggga ggggcacatc ctctaccagt
     1501 tcggcgggcg ggtgccggtc cgcccctgtt gcgacgtgga atactgggcc ggcaccgtcc
     1561 cgggcgatac gtcgggcacc ctgtgggatc gaactctttt gtatgaacag ctgccccggc
     1621 tgctcgatcc gccgaacggg tggctccaga atgccaatga tccgccctgg accagcacgg
     1681 tgccgactca cctccggccc gacagcttcc cgccctggct ttcgccccgc ttcatgcatt
     1741 tccgggctca gcgctccgcc cgaatgctgc aagcggattc gagcatcacg ttcgaagagc
     1801 tggtcgccta caagcattcg acccgcatgg agctggccga tcggatcctg gatgggttga
     1861 tcggcgccgc ccgcgcctcg ggccggcccg gggcgaagga ggcggccgag gtcctggaac
     1921 gatgggatag acaggcccgg ccggagagcc ggggtgcggt gctgtttgcg ctctgggcct
     1981 tcgagaccgc gggcgacaac ccgggaaggc caccgctgtt cgccgcccgg tggactctcg
     2041 actccgccat cacgacgcct aacggactgg caaacccgag agcggcggtg gcggcgctcg
     2101 agcgagtggc tcagacggtc aagacccggt tcggcgcgct ggatgtgccg tggggcgatg
     2161 tcatgcgtat tcgctacggc ggccgtgatc tgcccggcga tggcgcgccg ggtgacccgc
     2221 tcggcgtctt ccgggtcgcc ggctacgctc cggcccggga cgggaaattc cgtttgacct
     2281 tcggggacac ctattacgcc acggtcgaat tcggtcctac cgtgcgggcg aaggtcctgc
     2341 tggcgtacgg caacagcacc cagcctggct caacccattt cggagatcag atcgagctct
     2401 tcgtgaagca gcagatgcgg gatccgtggc ggacccggcc tgagattgaa gccaatctgg
     2461 agctgcggga gacggtgacc ggtaaacagt gaaccgtgaa ccgtgaacag tgaaccgtga
     2521 acagtgaacc gtgaacggcg ctcggtcgcg gctgcccttc attgtttact gtttaccgtt
     2581 caccgttcac cgttcaccgt tcaccgttca ctgtttcccg ttggggcggg gaacgaccgg
     2641 aagctcgacg taggaggggg cgctcgctgt gcgggagacc caccaggtca ccgcaccatc
     2701 cgccgggacc cgggcaaagg tatccttgtc ggccccggcc aatgccaggc ggatccggtg
     2761 gcctcgctgg aacagcaccg acgtggggag gagcccgaaa cggatttccg acagcgcccc
     2821 cggcgtcatc ggcgccgcgt cccgctcccg gaacgaatgg taagggtaga ggacccgata
     2881 ggggggcgcc gtcaccagcc ggtggatgcc gcggagttgc ccttcggtca cataggtcac
     2941 gcggccgtcg ggcgccacat cttctagata tacgaaaaag gccgcgtcgg cggctgacgt
     3001 cgtcagccgg agggtcatga tggcgttccc ggtgacctcg aggtcgcgtt ccagcggagc
     3061 cgaggtgtag gtcagaaggc ggcggtcggc ctcgacccga tccggataga ccacgtcgcc
     3121 accccccatt tgggtgtacc agcgattctg agttccggtg ctggtctgga agtcgacctc
     3181 gtagccgtca ctctcgctgt cggcgggcgc ggtccgggtg agcgagcttt gtggccccag
     3241 gtaccatcgc tccatcctgc tgccgggcag gggccagcgg gtggtggtct tccatcgctc
     3301 ctcccccacc gtgtagtagg tgattcgacc gggttcgggc ccagtggtgc gccgcttgag
     3361 ccaacgatcg aaccagcaga cggatgcacc ctgctggatg gccgccgtcg ggtcggtcgg
     3421 ggcatccggg gcggggaacg ggctggcgtg atggcccccc ccgtgggacc aggggccgat
     3481 caccaggaac tggggtgagc gccaggtcat ccaccggctc agggcaccat tcgcggtgcc
     3541 ggcatcgtac cagctggccc aaccgaagat cggcacccgg gcccgttcga tgggatcctg
     3601 ccagcggaag gcgctgtagt catcactgga cgcgccccac tcggggacga cctggtcccg
     3661 gtagatcgcc ttgagggccg cctcgtgcaa gggtggattg gcctcgtggt cccgcagggc
     3721 gagggcaagc agggggcgcc cgctgtcccc gttcaccggc cgaacgcccc ggctcgcctg
     3781 gccggtcccg gcgttccggt ccatggccgc gatggcacgg ccccactcgc ggatcatgaa
     3841 ctcgttgatc agcccccccg ggctcaccag atcggcccac acgtcgaaat ccatgaaccg
     3901 gggaaccact gccttgaggg gtttgcccgc ggtggcagcc gccagctgcg cagtattggc
     3961 ggtgtacgac gtcccgatgg ccccaacgtt cccatcggac cacggctgag ccgagatcca
     4021 gcggatgaca tcgcccaggt cgcggacttc gccccgcgac caggggtact tccagctgcc
     4081 gaacgaggcg ccggtcccac gcacatcgac gctcacgaag gcgtatcccc gccggaccca
     4141 atccagcgct tcgcgggacg gactggcgcc ttcgacaccg cgccagtagc gggtagcggt
     4201 gaggaccgcg ggcaaccggg ttccggccgt cagccgggcc ggaagcatca ggtccgccgc
     4261 caggcgaacg ccatcgggca tgggaatgaa gccggcgctg agcaccgcgc gcaccgaggt
     4321 gtcgggcggc gtcggacggc aatcggcgaa gggaccggcc tgggcctgga gcacactggt
     4381 cgcggccagg gcggcggtgg ccaccagggc gcggatcgga ggcatcacgc gccggtgtag
     4441 cgcggatcgc gcttttcgag gaaggcgcga agtccctccg ccagatcggg actgctgatc
     4501 gtctccacca cgccgtcgac ttcggccagc agcatcgagg tgagatcgct ctgccaggac
     4561 cgttgcagca gccgcttcac cagccggatc gatcgaggcg cggacgcggc gatctcctcg
     4621 gccatttcca gggcggcggg tagcagctcg gcggccggaa gtacccgact cacgaagccg
     4681 gccgcaagca actcgcccgc cgggatccgc cggcccgtga gcagccagtc cgaggcccgg
     4741 gcctgcccca ccgcacgggg caggaggtac atcacgccgt tggtttcgaa caacgcccgc
     4801 cggacctccg gaaacagcag gtaggcttct tcggccgcca gccgcaggtc ggccgccacg
     4861 cacagctccg cggccatgcc gaccgcgggt ccgttgatcg ccgcgatgat gatggccggg
     4921 tggtccaaca accgcgtcgt gagccgctgc agctcggtga ggtactcgtg gacccgcgcg
     4981 accggttcat cggccccggc cgggggctga cgcaaatcgt ggccggcgga gaacgcccga
     5041 ccggccccgg tgatgaccaa ggctcgcaag cgctgtggct gggtcgttcc ctcgagcagc
     5101 tcccccagcc gtcggaccat gccgtgatcg atcgcgttga gaacgtcggg ccggttgatg
     5161 gtgaggacgc cgaccagtcc ttcttcccgg tagcgcagca cgtcgtcact catggatggg
     5221 cgcccattgg ccagcggcgg catcccaggc gcccgcccgc tggtcagccc gggccgcgag
     5281 cagtcgatgc ttggcgatac gctcgctcgg cgtcatagga aagctctcca cgtactcgat
     5341 gaagcgaggg accttgaagg gcgccagccg ctggcgaacg aaatccacca gtaccgcggg
     5401 cggggcgtcg tccggggtga cgccggagac cagctgcacg aacgctttca cttcttctcc
     5461 ccggtccgga tccggtaccg ggacacaggc ggccgcccgt accgcggggt gctcgcacag
     5521 caccgcctcg acctcagcgg cggcgatgtt ctcaccgccc cggcggatca tgtctttgag
     5581 ccggcccagc agatggaaat atcccctggc gtcgcgatac accaggtcgc cggtgcgggc
     5641 ccagccgtcc tggaagaagc gagcggtcgc ttcgctgtgg cgccaataac ccgacatcat
     5701 cgccgggccg cggagctgca actcaccgat gccgccatcg atgatttcgc ccccgtgctc
     5761 gggatcgacc acgcgagctt cccggtgggg caagggagca cccatggcgc ccgagcccac
     5821 cgactcgccg tcctccagcg gcaccatcag tcccgcgccg atctcggtgg tgccgtaaac
     5881 ctcgcgccag gggcagcccc agcgggattc gaatcgcggg tgcagctggg gcgcaatccc
     5941 ggagcacagc acggcgcgga cccggtgtcc ccgttccagg tccggttgct ccggctgttt
     6001 gagcaacagc agcggcatcg tcccaagaca atagaagaac gtaacgccct catcacggat
     6061 ccggcgccag aaggtggagg cggagaagcg cggcaagagc accaggggcg ccccggcgat
     6121 cagtcccgcc accaggttcc acatcgggtc catgtagtag aacggccccg cggtcaggat
     6181 cacgtcgtcg ggggtcagcc tgccgaaccg gaccgcggcg ttacccagct cgagccaata
     6241 ggcatgagac agcatgcagc ccttcggaaa gcccgtagtg ccggaggtgt actgcagggt
     6301 caccagatcg ttgggcacga gcgccggaag gtctcgaccg ggaggagcgg cttccagcct
     6361 ctccaccagt gattcggtcc ccggcggcgc caccgggtcg ttgacggcca ccatccgcag
     6421 ctcgggacaa tgggcgcgcg cggcgagcag atcggtcgcg cgttccgcgc tggtcaccgc
     6481 gatcgacgcc cccgagtcgg ccagtacatg ctgcaagtcg gcagtccggt aggtgtagtt
     6541 gaccgggacc accacggctt cggcggcagc ggctcccagc catgcggcgg gaacatccaa
     6601 accgttgggc aggatgagcg cgacccggtc gccccgccgg atcccgagcc cttcgaacgc
     6661 gtaggcccag cgggacgcgg ccgcatcgag tcccgccagg ctcaggctcg cgccctcgaa
     6721 ccgcagcgct tcccgtcccc catgggtccg ggctcgatcg cgcagcagat ggggaacaga
     6781 ggtccagtga gtcatgcttg cgggcggagg ccgggtgggg ccaatgttac ttcgtatcca
     6841 tccctggatg caatgaatca ggtcccatta cggcgtcagg tcgggctcgc cggcgcggtc
     6901 ttcacgctgg tgggttatgt catcggcgcc tctatcttcg tgctgccggg ccagctgggc
     6961 gcccgagcgg ggcccgcgct ggtcgtgagc tacctgctgg ccgcgctgct ggccggtctg
     7021 gcctgcctcg ccgcggcgca catcggcagc cagttgccgg tgagtggtgc catctacgtc
     7081 gcggtgagcc gcaacgtgag tccgcgggcc gggtttctag tcctgtgggc gattctcgcg
     7141 tcggtcaccg tgggcgtacc ggtcgtggcc tacggtctgg ccgactacct ctggtatttc
     7201 gtccccggcc tggcgcggct gccggtcgcg ctgatggtgg tgacgatctt cggcctgatc
     7261 aatctgctgc cggtccgggg ctcggtgctg gttcaaacgg tgctcaccgg ggcgttcctg
     7321 ctgctgctct acggtttcgg ctggcaggct gtgcggcagg tggacgccgg acgcttttcg
     7381 ccgttcttcg ccaacgggat cggcccggtg ctgggcgcgg cggtgggggc atacttctca
     7441 ttcaccggtt tcatggcgct ggccaacatc ggagaagaaa tcaagacccc gggccggacc
     7501 ctgccccggg ccctggtcct gagtttcatc gtggtcaccg tggcgtacct gttgacggcg
     7561 gtggcggtca ccgggttgct ggagtggcga accctggcgg atgtgccggc cccgttggcg
     7621 acggcggcgg agaccttcct gccgtcatgg gcggtcggcc tgatctcgct caccgccatt
     7681 ctcgccgccg ccacgacggt gcacggcgtg ctgctggtgc actcccgcga cgtctacgcc
     7741 ttggcgcgcg atcgggtctt tcccccgctg atcggctggg ttcatccggt cacccggatt
     7801 cccgccgccg cggtgctggt cctcaccggt ctggccctgc tcggcgtgtt ggcaggcgcc
     7861 gcgctgctgg actacgccct cctggccgtg ctgggtgtga tgttcatgca ggtcggcgcc
     7921 ggcgtggcct tgcttcgcat gccgagctat tcctcgcccg gccggtttgc gctgcgcggg
     7981 aaaccgcgcc ggaccgtggg gatcgggctc atcgtcacgt cgggctcgtt tgcgctggtg
     8041 gggtccctgg agcggccggc ggtcgctctg gtctttgcgg tggtgatggc caccggcctc
     8101 ctatattact ccgcccgccg gcgcgctctc gcggcccgcg gtcagcacct cgacgaactc
     8161 ttcgcgcact cactggactc atgatccgca tcctgccgcc gctctgcctg atgctcgcca
     8221 ccgcgagcac cgctgtcggt caaaccgacg ccaacctcga actcgcccgg cgggtgcttc
     8281 gcaccacgcc gttgatcgac ggccacaacg acctgccctg ggccatccgg gaatcgcccg
     8341 aggcgcgggg ccaggtggag agctacgacc tgcggggccg agcccccggg cacaccgacc
     8401 tggcgcggct ccgggccggg attctgggcg gccagttctg gtcggtgtac atccccggcg
     8461 agatccggga ttcgggatac gcccgggtgc agctggagca aatcgatatc ggccggcgga
     8521 tcatcgagcg gtatcctgac gcgttccagt gggccctcac gtcggatggc atgcgcgagg
     8581 cgttcgcggc tggccggatc ggctcggtgc tggggatgga gggcggccac gccatcgaga
     8641 attcgctggg ggcgctgcgg gcgtattacg acatgggggt gcggtacctg accctcaccc
     8701 acaacgtgac gttggactgg gccgacgcgg cgctggactc ggtgcgacat ggcgggctga
     8761 cccggttcgg cgaggaggtg gtgcgggaaa tgaaccggct gggcatgctg gtggatctgt
     8821 cgcacacctc gcccgctacc atgagtgatg tcctcaatgt cgccgcggcg ccggtgatgt
     8881 tctcccactc cagcgctcga gcgctggtag atcatccccg caacgtgccc gactccatcc
     8941 tgcgccgcct gcccgcgaac ggcggggtgg tgatggtgac cttcgtgacg tcgttcgtgt
     9001 cgaaggcgtc caaggaccac ggggaccgcc gcgccgcgac cgagcgggcg ctgcggcagc
     9061 gactggggcc cgacacggcg gcggtgactc gggagctgag cgggtgggat cgccagaacc
     9121 cgccccccaa ggtccgactg agcgaggtcg ccgaccacat cgaccacgtg cgccaggtcg
     9181 ccggcgtcga tcacgtcggc atcggcagtg atttcgacgg gatcagtgaa gtgatcgaag
     9241 ggctggagga tgtgtccacc ttcccggccc tgttcgcgga gctggcacgc cggggatgga
     9301 ccgaggccga cctgcggaag ctggccggcg agaacattct ccgggtgatg tcgcgggcgc
     9361 aggatgtctc gatgcggctc aggcgcgagc ggcctcccag caaccgcacc atcctggagc
     9421 tggacgggcg tccacgaacc acctgagccc atgccggcga tctcggtcgt ttcggtgatc
     9481 gccggtgccg cgttcgtcat ggcgctggcg atgcccttcc atcgctatcg caggctcgcg
     9541 gcgggcctcg tgatcgccgg cctcggcgcc gccagcctgc aggtcggact cggcaccgat
     9601 cgggtcgacg cgctggtgca gctggcacgg accgctgcgg aacgggaccg ctggttcctc
     9661 cggatgggag tgggcctgat gctggccggc ggggccgcgg cgctcgctct ggcgctcctc
     9721 ccggcccgtt ccggagcgcc ggggacaccc tcgatgccgc tgacgctgca gcggggcgg
//
LOCUS       DASWKS010000460        13377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_614078, whole genome shotgun sequence.
ACCESSION   DASWKS010000460 DASWKS010000000
VERSION     DASWKS010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_614078"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1267)
                     /locus_tag="VGA78_13080"
     CDS             complement(62..1267)
                     /locus_tag="VGA78_13080"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen-binding domain-containing protein"
                     /protein_id="HEX9894855.1"
                     /translation="MTRQPTFSPFRYACFPGRAPRPLAWALVALSALRPGAVAAQRVS
                     STFDLSGVKLRYADTVDAGAATLSPSLTFSWPRGSADVAASLSQFDTGDWAAQGSLVG
                     AVFVPVARWLAGEVAGSTGGSAHQDGTSTGQGLGTARAHVLTPDAGLWIGGGIGRVWD
                     GDLWQGLRHAEAGGWARLGRAALLATVSPTAVGDTTRYTDAQVFVRWTMARLELGGSA
                     GWRFGSRLPAYGGGGTAWGSANAVLWITSRIAVVAGGGSYPVDPTQGFPGGRYASVGL
                     RLSSRQRTPEAGWAGRQARESAEAIARGATDFVVSAAPDGERTLRVRAPSAQRVEISG
                     DFTGWKPIGLAPAGDGWWTVVVPIAPGTYQVSIRLDGGKWLVPPGLMAIIDEFGGAAG
                     LLVIEDTSL"
     gene            complement(1264..1866)
                     /locus_tag="VGA78_13085"
     CDS             complement(1264..1866)
                     /locus_tag="VGA78_13085"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HEX9894856.1"
                     /translation="MTDRDEISPRAGDEQAFLDRVVPSLRAPETLESNFEARVMAVAR
                     AEAPRRYPRSPHRWWRRPRIVRLSPLGGLALAAGFAGLVSLGTLAAANGLRNDAPAVT
                     GPEAIDTIHVVRFVLVAPGARHVTLVGDFNAWAKESTPLVAAAVEGVWSVSVPLLPGR
                     HEYAFVVDGERWVVDPMAAAVTDDFGTETSIVTVGSDRAT"
     gene            complement(1859..2407)
                     /locus_tag="VGA78_13090"
     CDS             complement(1859..2407)
                     /locus_tag="VGA78_13090"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9894857.1"
                     /translation="MPARSDAALVADVIAGEVEAFAVLLQRYRDAYTRFAVRMLGSPE
                     DADDALQFAFLRAFRALPKCAEPGRFGAWLYQIVVNECRTFATRRGRRERWFVRDPVT
                     LEAVPARENPTGEHGLRQEIQYALDRLVAEQREAFILKHVEELSYEEMAEITGVGVSA
                     LKMRVKRACEQMRDMLEEAYHD"
     gene            2602..4179
                     /locus_tag="VGA78_13095"
     CDS             2602..4179
                     /locus_tag="VGA78_13095"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX9894858.1"
                     /translation="MKRLTPLIALAMIAACQDATEPTGDANQPALSLQGAQGQAVQDQ
                     VRPGIVLARFQTGVSAEAVAPAYGLAVAGRGYANAFVVLRGAVGSERALAARLGADAR
                     VVYAEPDYLRLPTAVDPRLWAFFNPGGLQMFFTSGPNRGDPVTSLLSKADADEDNVEG
                     YAGGGGQVVISSIDTGVEFGHPEFLSGQLIAGTDWYSNDNDPSDNNGHGTHTTGTMVG
                     QTVGVAGVSGAGSNVKVLVQRVCGPSFCPSSAIANAIRAAADYPVVAMNLSLGGGSLS
                     TAEQEAIAYATGKDALVIASAGNGGTSTVECPACDPNAISVAASDWLDEHAYYTNWGT
                     GLDLTAPGGELYSNTTEEGGIYSAYLGGGYRYLQGTSMAAPQVTGTAAIVASKLGLRG
                     AELRSKLESTADDLGAGGYDTNFGHGRLNSYRAVTGTTPPLEPSGGGTTLAASFTYGC
                     HGSATCEFNGSSSSKATSWNWTFGDGGSTAGAIVSHTYAAAGDFVVTLTVGDGSSTAS
                     TSQTVSCTTKGPKLRCR"
     gene            4374..5060
                     /locus_tag="VGA78_13100"
     CDS             4374..5060
                     /locus_tag="VGA78_13100"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEX9894859.1"
                     /translation="MMAPQDLRATAALLAALAFLGCGGGPGVVQPSPQPAAEPQGEVA
                     ATTAARADSARNPYTEADIHFMSAMISHHAQAIVMAGWADTHDASPAVRILAGRIINA
                     QQDEIGLMQRWLRERGLPVPEASPTGMKMKMNGVEHEMLMPGMLTPDQMEQLNKARGA
                     DFDWIFVTSMIQHHRGAVDMVKELFGTTGAAQDDAVFKLASDVHVDQITEIDRMVKLL
                     ASLPSGARSP"
     gene            5117..7183
                     /locus_tag="VGA78_13105"
     CDS             5117..7183
                     /locus_tag="VGA78_13105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894860.1"
                     /translation="MASQSPAQRSHAEAVAAPLFSFALGLLSLTACGQSTTSSGPGTP
                     SPAGLSATAPSPDPRIGLRAGKMDAAEAIWNLRVVSKTPPPPSFAGVTNSDLAFLGKY
                     AIQGNYNGWQIWDISDPAKPVLATAYVCPASQSDVSVYQNLLFISGEGLGGRLDCGTQ
                     GVRDTVSKERLRGLRVFDISDIKNPRNVGNVQTCRGSHTHTVVVDPKDPANVYVYISG
                     SAPPRSPSELPGCSGEALEKDPNSALFRIEVIKVPLANPGQAAIVSSPRIFNDLAAPP
                     RHGEAPEDIARAKQRAAAARAKGEFTAEIFGTEQVLPSGFSRQLLDSLVKARGGTGAP
                     TAADSATLRRELPTIVQRLIGASGPRTGPTQCHDITVYPEIGLAGGACEGYGFLLDIK
                     DPANPRRIAEVADSNFSYWHSATFNNDGTKILFSDEWGGGGAPKCRATDRKEWGADAL
                     FTIVDQRGGPIIYIDGVLQGQPSKMQFQSYYKLPAAQTELENCVAHNGSLIPIPGRDL
                     MVQAWYQGGISVFDWTDTAHPKEIAFFDRGPVDSTRMGNAGSWSVYWYNGVMVSSEIG
                     RGLDIFELTPSGFISQNEIDAAKTVKFDHFNTQGQRKFVWPPSFALARAYVDQLERSN
                     GLAAGRIAAARQSLAGAEEASGAQRRNALTQLGTQLDGDAGGSRDGAKVRLLATAVKE
                     LAGASR"
     gene            7321..7755
                     /locus_tag="VGA78_13110"
     CDS             7321..7755
                     /locus_tag="VGA78_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894861.1"
                     /translation="MARPDPTAEARKVRLLHAILVGGVILLGATLFLVVRLRGGPLLA
                     GAGPADPIAYVMSAAALSSLGLAVMVFRPRLPEPARGDVSIAYWTPENRGVALLLWVL
                     FEGAGSIGAVGYLLTGHPAPLLAAAMGLLALLWYSPGRLAGD"
     gene            complement(7771..10332)
                     /locus_tag="VGA78_13115"
     CDS             complement(7771..10332)
                     /locus_tag="VGA78_13115"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9894862.1"
                     /translation="MFEDLRIRLRALFRRRAVEQELEEELRHHLATQVEHYRALGLSQ
                     DEAARRARLDFGAVEQVKEECRDARGVRFIEDAWRDLLYGCRSLWRHRVSSAAAIGTL
                     AIGIGVNAGVFAVVDWVLLRPLPYPEARELIRVSSDGPSEAEGLLTYSEVEAFSGVGA
                     LGARAAFSQALRVMAGPGVEPSHVVVARVTGDLFATLGVFPALGRGFDRDEIEAGTPV
                     VVLSHALWTNRLSRSPESIGRVLTIDGSPHTIVGVMPPGRWLPREADLWRPLTAPERE
                     DDDRDHVMIARLGAGVSAERATSELEAVGPRVLPDGLRLRVEELQRSDVRGVRETLIA
                     LMASAGLILLIACANVGALLGARSADRQGETAIHGALGASRGRLLRRLLTESLLLAAI
                     GGLLGLLLGRWTLHLVVGLAPGSLPRLDEIALDTRVVLVGLVTTFMVSMVAGLGPAVR
                     ASRLDLRAVLGLAGSGRTTGRTRSRRVLVVAQTALAIVVTIGAGLLGRSIQNLVRIDH
                     GFTPDRLLAIDLYLQGGYTGDVPQLYRDLIDAAEAVPGVHSAAITLRLPTAVTGPRMP
                     LKIDGSPSREPIVATLRPVTPGYFETLDIPLLDGRLFAISDRREAATVALANSAFVRQ
                     VLDGGQALGRRMTSDLVDGGLSIVGVVGDVTPGSASDRPALYVSMEQVPFAGGSLVVR
                     TEGEPGTVLPGLTARVRSVAPSLALDRTHELADLLAEGRAVTRFNALLAAGFAGIALL
                     LAAIGVYGLTAGEVSARWRELGVRLALGASSPRAIWTVLQPGIRALALGVMLGLLLAL
                     VVGQWMGSLLHGVSPADPLTLVAVSLTLIVVGLVAASLAALPVLRGDPAATLRQE"
     gene            complement(10339..10656)
                     /locus_tag="VGA78_13120"
     CDS             complement(10339..10656)
                     /locus_tag="VGA78_13120"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9894863.1"
                     /translation="MELPQGTLDILILKALALEPLHGWAISHRLHQLSQATLSIRQGS
                     LYPALHRLERRGWIKGRWGTSVNGRRARYYELTRRGQAQLASDTAAWRRLSATIATVL
                     ESS"
     gene            10799..11905
                     /locus_tag="VGA78_13125"
     CDS             10799..11905
                     /locus_tag="VGA78_13125"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX9894864.1"
                     /translation="MPRAPSAEAFPIEPPIEPMLAKLADALPPDGTFLFEPKWDGFRA
                     LVFRSTSDLYIQSRDLKPLDRYFPELHDALLEQLPQGCVLDGEIVITTPDGLDFDALQ
                     MRLHPAASRVEKLAKETPASFVGFDLLAADGRSLMEAPQNERRSRLERLLANAGPPVY
                     LTPITRDRKVAARWLEEFEGAGLDGVMAKPVDATYQPGKRTMVKVKHARTADCVVAGF
                     RWHKTGKDVIGSLLLGLYDDRGLLQHIGVTSSFTMAMRQQLVKELAPLREQAFENHPW
                     REWAQAEAAGQKRMPGGQSRWSAGKDLSWEPLRIERVCEVKYDHLQGNRFRHAAVFLR
                     WRPDKQPRDCRYDQLEVTRPYELDQVFSSGSSGS"
     gene            complement(11860..13143)
                     /gene="ligD"
                     /locus_tag="VGA78_13130"
     CDS             complement(11860..13143)
                     /gene="ligD"
                     /locus_tag="VGA78_13130"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEX9894865.1"
                     /translation="MPRSRGEASRPTGADPELVAVDGREIAISNPAKVLFPKPGHTKL
                     DLVRYYLAVADGALRGAGGRPNMLVRFPDGIAGEFFYQKRAPVSRPAWVEVVSLRFPS
                     GRSADEVVPRDAAALAWLANLACLELHPHPVRADDLEHPDELRVDLDPVPGVKWEQVR
                     QVAHVVAAVLGDFGLTGWPKTSGSRGIHVNVRIERRWTFDQVRRAALALAREVERRAP
                     RIATSKWWKEERHGVFVDYNQNAKDRTVASAYSVRPTPLAQVSAPLGWDEIDSADPAD
                     FTLVTMPGRFAQIGDRHRDIDRNPGSLERLLELSAEQERDGLGDAPWPPHYRKQQGEP
                     PRVQPSKRREPKHPMIEIGRAKRKQDALAGMERWKARHPEAAGHLEEADVLVDRMRGR
                     SSLWYRIRVNLQHVPAKLRPAQEPLDPDEKTWSSS"
BASE COUNT         2255 a         4665 c         4410 g         2047 t
ORIGIN      
        1 aacaacctct ctcggtagtg actgttccca tgagattgga ctgccgaatc acgtgcgggg
       61 gtcacaatga cgtatcctcg atcacgagga gtccagccgc gccgccgaat tcatcgatga
      121 tcgccatcag gcccggcgga acgagccact tgccaccgtc cagccggatg cttacctggt
      181 aggtgccagg agcgattggc accacaacgg tccaccagcc gtcgccggcc ggtgccagcc
      241 cgatgggctt ccaccccgtg aagtcgccgc tgatttccac cctctgtgcc gaaggtgcgc
      301 ggacccgtaa ggtccgctcg ccatcggggg cagcactgac cacgaaatca gttgctcccc
      361 gagcgatcgc ctcggctgac tcgcgagcct gtcgtccggc ccaaccagcc tccggggtgc
      421 gctgacggga cgagagtcgc aggcccacgg aggcatagcg gcctccgggg aagccctgcg
      481 tggggtcgac cgggtagctg ccgccaccgg cgacgaccgc gatccgggac gtgatccaca
      541 ggactgcgtt cgcgcttccc catgccgtcc cgccacctcc atacgccggc agcctgctgc
      601 cgaagcgcca tccggccgag ccacccagct cgagccgtgc catagtccag cggacgaaga
      661 cctgggcatc ggtatatctg gtggtgtctc ctaccgcggt cgggctgaca gtggcgagca
      721 gggccgcgcg gcccaaccga gcccaaccgc cggcctcggc gtgccgcagg ccctgccaga
      781 gatcgccatc ccacactcgg ccgatgccgc cgccgatcca gagaccagcg tcaggggtca
      841 atacgtgggc gcgcgcggtc ccgagtccct gaccggtact ggtcccatcc tggtgagcgc
      901 tcccgccggt cgagccggcg acctccccgg ccagccagcg cgcgacgggg acgaagaccg
      961 ccccgacgag cgagccctgg gcggcccagt cgccggtgtc gaattgcgac aaactggctg
     1021 cgacgtcggc gctgccgcgc ggccacgaga aggtgagact tggactcagc gtggccgccc
     1081 ccgcgtcaac cgtgtcggcg tagcgcagct tgacgccgct caggtcgaac gtgctgctca
     1141 cccgctgcgc ggcaacggca cctggtctca gggccgacaa ggccaccagc gcccaggcca
     1201 gagggcgcgg tgcccgtccc gggaagcaag cgtaacggaa ggggctgaag gtgggctggc
     1261 gcgtcacgtg gcgcggtcgc tacccaccgt cacaatcgaa gtctcggttc cgaaatcatc
     1321 ggtcactgcc gcggccatgg ggtcgacgac ccaacgttcg ccgtcgacca cgaacgcgta
     1381 ctcatgacgc ccgggtagga gcggcaccga gacggaccac actccttcaa cggcggcggc
     1441 aaccaggggt gtcgactcct tcgcccaggc gttgaagtcg ccgaccaggg tgacgtggcg
     1501 ggcgcctggt gccacgagca cgaatcgaac gacatgaatc gtgtcgatcg cctctggccc
     1561 agtcacagcc ggggcgtcat tccggagccc attcgcggcg gcgagtgtac cgaggcttac
     1621 cagaccggcg aagccggcag cgagcgccag gccgccgagc ggcgacaagc gtacgatgcg
     1681 ggggcggcgc caccaccggt gcggcgacct cggatatcgc cggggtgcct cggcccgcgc
     1741 gaccgccatg acccgtgcct cgaagttgga ctccagggtc tccggcgccc gcagcgacgg
     1801 taccacccgg tccagaaacg cctgctcgtc gccggcgcga ggggagatct cgtcgcgatc
     1861 agtcatgata tgcttcctcc aacatgtcgc gcatctgttc gcaggcccgc ttgacccgca
     1921 tcttgagcgc ggagacgcca accccggtga tctccgccat ctcctcgtag ctcaactctt
     1981 ccacgtgctt gagaatgaac gcctcccgct gctccgccac caggcggtcg agagcgtact
     2041 ggatctcctg gcgcaacccg tgctcgccgg tgggattctc cctggcgggc acagcctcga
     2101 gcgtcaccgg gtcccgcacg aaccatcgct cccgccgccc gcgccgcgtg gcaaacgtcc
     2161 ggcactcgtt cacaacgatc tggtagagcc aggcaccaaa gcggcccggc tcggcgcact
     2221 tgggaagcgc gcggaaggcg cgcagaaagg cgaactggag cgcgtcgtcg gcgtcctctg
     2281 gactgccgag catgcggaca gcgaagcggg tgtatgcgtc gcggtaccgc tgaagcagga
     2341 ccgcgaacgc ctccacctcg ccggcgatca cgtcggcaac gagcgccgca tcggaacggg
     2401 caggcacctg aggtagacta cgcgattcat ccttcacgtc acaccccgac ctgattctcc
     2461 cggttccagc ccgctgcttc ttgccattcg gccggtcaga tgaaataatg gcagtgtcct
     2521 agtgaagtcc atttgtcaca gattcaagcc tctgagccgc gctccgtggc aaaggggaaa
     2581 gcgcatcttg aagagggccc aatgaaacgt ctcacccccc tgatcgctct cgccatgatc
     2641 gccgcctgcc aggatgccac cgaacctact ggggacgcca accagcctgc gctttcgctg
     2701 cagggcgcgc agggacaagc tgtccaggat caggtcaggc ccgggatcgt actggcccgt
     2761 ttccagaccg gggtttcggc cgaagccgtt gctccggcct acgggctggc ggtcgccggc
     2821 cgtggctacg cgaacgcctt cgtggtgctg cggggagcgg tgggcagcga acgggccctc
     2881 gccgcgaggc tcggcgctga cgcccgggtg gtgtacgccg agcccgacta tctccgtcta
     2941 ccgaccgccg tcgacccgcg gttgtgggcc tttttcaacc cgggcgggct ccagatgttc
     3001 ttcacctcgg gaccgaatcg gggcgacccg gtaacctcgc tcctctccaa ggcggatgcg
     3061 gacgaggaca acgtggaagg ttatgccggc ggcggcgggc aggtggtgat cagcagcatc
     3121 gataccggag tggagttcgg ccatcccgaa ttcctctcgg gccagctgat cgccggaacc
     3181 gactggtaca gcaacgacaa cgatccgagc gacaacaacg ggcatggcac tcacaccacc
     3241 ggtaccatgg tgggacaaac ggtgggtgtg gctggtgttt ccggtgccgg ctccaacgtg
     3301 aaggttctgg ttcagcgggt gtgcggcccg tccttctgtc ccagttcggc catcgcgaat
     3361 gccattcgcg ccgcggcgga ttaccccgtg gtggcgatga acctgagcct gggtggagga
     3421 tcgctatcga ccgcggaaca ggaagccatc gcgtacgcga cggggaagga cgcgctggtg
     3481 atcgcatccg ccgggaacgg cgggaccagc accgtggaat gcccggcctg cgatcccaat
     3541 gccatctcgg tggcggcgag cgactggctg gatgagcacg cgtactacac caactggggc
     3601 accggactcg acctcactgc tcctggcggt gagctctact ccaacaccac cgaagaaggc
     3661 ggcatctaca gtgcttatct gggcggcggc taccgctacc tccagggtac ctcgatggcc
     3721 gcgccgcaag tcaccggcac cgccgcgatc gtggcctcga agctcgggct tcggggggct
     3781 gagctccgct ctaagctcga atccacggcc gatgatctcg gcgccggggg gtacgacacc
     3841 aacttcggcc atggccggct caacagctac cgggccgtga cgggcacgac gccgccgtta
     3901 gaaccctccg gaggggggac gacgttagcc gcatccttta cctatggatg ccacggaagc
     3961 gcgacctgcg agttcaatgg cagcagctcg tccaaagcca cttcatggaa ctggaccttt
     4021 ggggacgggg ggagcaccgc gggagcgatc gtctcccaca cctatgcagc ggcgggggac
     4081 tttgtggtga cgttgaccgt gggcgacggg agctcgaccg catccaccag ccagaccgtg
     4141 agctgcacga ccaagggccc caagcttcgc tgccggtgaa cccatagcgg tcggctttcg
     4201 tgtgacgatc atgagcggcg cggggtgatc accccgggcg gctctgtcta ttacgacggt
     4261 ggtcgagttc ctcgaccggt atgggaatga acccactcag gattatcctt atggccctac
     4321 ggccgaacct tccggggcac cgctcccgtt gtgttttctg gagaatgact ggaatgatgg
     4381 caccacaaga tcttagggcc actgccgccc tcttggccgc cctggccttc ctgggctgtg
     4441 gcggcggccc gggtgtggtc cagccctccc cccagccggc cgctgagccc cagggcgagg
     4501 tcgcggccac caccgcggcg agggcggaca gcgcccgcaa cccctatacc gaggcggaca
     4561 tccacttcat gtccgccatg atcagccatc atgcccaggc tatcgtaatg gccggctggg
     4621 ccgacaccca cgacgccagc cccgcggtcc ggatcctggc cgggcggatc atcaatgccc
     4681 agcaggacga gatcggcctc atgcaacgct ggctccggga gcggggcctg ccggtgccgg
     4741 aggcaagccc cacgggcatg aagatgaaga tgaacggcgt cgagcatgag atgctgatgc
     4801 ccggcatgct taccccggac cagatggagc agctgaataa ggcccggggg gcggactttg
     4861 actggatttt cgtgacctcg atgatccagc accaccgcgg ggcggtcgat atggtcaagg
     4921 agctcttcgg caccaccggc gcggcccagg acgacgccgt cttcaagctc gcctccgatg
     4981 tgcatgtcga tcagatcacc gagatcgacc ggatggtgaa gctgctggcc tccctgccgt
     5041 ccggggcgcg tagtccatga tcaacctgtc gtcccagatc tgtcggtcca actcagtctc
     5101 ctccaaggaa ttgccaatgg catcccagtc cccggcgcag cgttcccatg cggaagcggt
     5161 agccgcccct ctgttctcct ttgcgctcgg gttgttgtcc ctgaccgcgt gcggccagtc
     5221 gaccacctct tcgggccccg gcacaccgtc gcccgcgggt ctgtcggcca ccgcgccgag
     5281 ccccgatcca cggatcggac tccgggccgg gaagatggat gccgcggaag ccatctggaa
     5341 tctgcgggtg gtctccaaga ccccaccgcc gccgagtttc gccggggtca ccaactccga
     5401 cctggcgttc ctcggcaagt acgccatcca gggcaactac aacggctggc agatctggga
     5461 catctccgac ccggccaagc cggtcctggc caccgcttac gtctgccccg cttcgcaaag
     5521 cgacgtctcg gtctaccaga acctgctctt catctcgggc gaggggctcg ggggccggct
     5581 cgactgcggg acccagggcg tgcgggacac cgtgagcaag gagcggctgc gcgggcttcg
     5641 ggttttcgac atcagtgaca tcaagaaccc tcgcaacgtc ggcaacgtgc aaacctgccg
     5701 cggctcgcac acccacacgg tggtcgtgga tccgaaggac cccgcgaacg tatatgtcta
     5761 tatctcgggc tcggctccgc cgcggtcgcc gagcgagcta cccggctgct ccggcgaagc
     5821 actcgagaag gaccccaatt cggcgctctt ccggatcgag gtcatcaagg tgccgctggc
     5881 gaacccggga caggccgcca tcgtgagctc gccccggatc ttcaacgatc tggcggcgcc
     5941 tccccgtcac ggcgaagcac ccgaggacat cgcccgcgcc aaacagcggg ctgcggcggc
     6001 acgggcaaag ggtgaattca ccgcagagat cttcggaacc gagcaggtcc tgccttccgg
     6061 cttctcacgg caactgctgg acagcctggt gaaggcccgg ggcggcaccg gggcaccgac
     6121 cgcggccgac agcgccacgc tgcggcggga gctgccgacc attgtccagc ggctgatcgg
     6181 cgcctccggc ccccggaccg ggcccaccca gtgccacgac ataacggtgt atcccgagat
     6241 cggcctggcc ggaggcgcct gtgagggtta cggcttcctg ttggacatca aggacccggc
     6301 caatcctcgc cggatcgccg aagtggccga ctcgaacttc tcttactggc attcggcgac
     6361 cttcaacaac gacggcacca agatcctctt ctcggacgaa tggggcggcg gcggagcacc
     6421 gaagtgccgc gccaccgacc ggaaagagtg gggagccgat gcgctcttca ccatcgttga
     6481 ccagaggggc ggtcctatca tctacatcga cggcgtgctc caggggcaac cgtcgaagat
     6541 gcagttccag agctactaca agctgcccgc cgcgcagacc gagctggaga actgcgtggc
     6601 tcacaacggc tcgctcatcc cgatcccggg acgcgacctc atggtgcagg cctggtacca
     6661 gggcggcatc tcggtcttcg actggaccga tacggcgcac cccaaggaga tcgccttctt
     6721 cgaccgcggg ccggtggact cgacccggat ggggaacgcc ggctcctggt cggtgtactg
     6781 gtacaacggg gtgatggtca gctcggagat cgggcgtggc ctcgacatct tcgagttgac
     6841 gccgagcggg ttcatctcgc agaacgagat cgacgccgcc aagacggtca agttcgatca
     6901 cttcaacacc cagggccagc gcaagttcgt ctggccgccc agcttcgcgc tggcgcgggc
     6961 ctacgtggat cagctggagc gttcgaacgg cctcgccgcc ggcaggatcg ccgcggcccg
     7021 gcagtccctg gctggcgccg aggaggcgtc gggggcccag cggcgcaacg cgctgaccca
     7081 gcttgggacc cagttggacg gcgacgcggg aggttcccgc gacggtgcaa aggtccggct
     7141 gctggcgacg gcggtgaagg agttggccgg cgcctcacgc tgatgaatcg ttaggcaggt
     7201 tatccacgga ttacgcagat gacaccgatg cgggacgatc cttcgctgtc cccatcgaaa
     7261 tcagtgtcat ccgtgtaatc cgtggattgt tgttgtcgtc ctgcaccccg gaaccgaacc
     7321 atggccaggc ccgacccgac cgctgaagcg cgcaaggtcc ggctcctcca cgctattctg
     7381 gtgggcggag tgatcctgct cggggcaacc ctgttcctcg tggtgcggct ccggggtggg
     7441 ccactcctgg ccggggcggg gccggccgac ccgatcgcct acgtcatgtc cgctgccgcg
     7501 ctctcatccc tcggcctggc tgtgatggtg ttccgccccc gactgccgga gccggcccgg
     7561 ggcgacgtct cgatcgccta ctggacaccg gagaatcgcg gggtggcgct gctgctctgg
     7621 gttctgtttg agggggccgg aagcatcggg gcggtcggct acctcctcac cggtcacccc
     7681 gctcccctgc tcgcggccgc gatgggattg ttggcgctgc tctggtacag ccccgggcgg
     7741 ctggcgggcg actgatcccg gggtcgagtg ctactcctgc cgcagggtgg ccgccgggtc
     7801 accccgcaga accggaaggg ccgcgaggga tgccgccacc agccctacca cgattagtgt
     7861 cagggagacc gcgacgagcg tgagaggatc ggccgggctg accccgtgaa gaagcgaccc
     7921 catccattgt cccaccacca gcgccagcaa cagcccaagc atcactccca aagccagagc
     7981 ccgaatgcca ggctggagca cagtccagat cgccctcggt gaactggcgc ctaacgcgag
     8041 tcgcacccca agttcccgcc agcgtgccga cacctcgccc gcggtgaggc cgtacactcc
     8101 gattgccgcg agcagcaatg ctatgccggc gaaccccgcc gcgagcagcg cgttgaaccg
     8161 ggtgaccgcc cggccctcgg ccagaaggtc cgccagctcg tgggtgcggt ccaaggccag
     8221 cgagggagcc acgctccgca cccgagcggt gaggccgggt aggacggtgc ccggctctcc
     8281 ttccgtgcgc accaccagcg atcccccggc gaacggcacc tgctccatcg acacataaag
     8341 cgccggccga tcgctggcgc tccccggggt gacatcgccc accaccccca cgatcgagag
     8401 tccgccatcg accagatcgc tggtcatccg gcggcccagc gcctgacccc catccaggac
     8461 ctgccgcacg aacgcgctgt ttgcgagcgc cacggtggcc gcctcccggc ggtcactgat
     8521 ggcaaagagc cggccgtcga gcagcgggat atccagggtt tcgaaatacc ccggcgtcac
     8581 cggccgcaac gtcgcgacga tcggctcccg gctgggagat ccgtcaatct tgagcggcat
     8641 tcgaggcccg gtcaccgcgg ttggcagcct cagcgtaatc gccgcggagt ggacgccggg
     8701 cacggcttcg gccgcatcga tcagatcccg atagagctgc ggcacgtcgc cggtgtaacc
     8761 tccctggagg tagagatcga tcgccagaag ccgatccggg gtaaagccat ggtcgattcg
     8821 aaccagattc tgaatgctgc gccccagcaa tccggctccg atcgtcacca cgatcgccag
     8881 agccgtctgg gccacgacca ggacccggcg gctccgggtc cggcccgtcg ttcgtcctga
     8941 cccggccaag ccgaggaccg cccgaaggtc gaggcgcgac gctcgcaccg cgggacccag
     9001 gccggccacc atgctcacca tgaaagtggt gaccaggcca accagcacca cccgagtgtc
     9061 gagcgcgatc tcgtccagcc ggggaagcga gccgggagcc agcccaacga ccaggtggag
     9121 agtccatcgc ccgagcagca ggccgagcag cccaccgatc gcggcgagca ggaggctctc
     9181 ggtcagaagg cgacgcaaca accgccctcg actggcaccg agcgcgccgt ggatggcggt
     9241 ctcgccctgc cggtcagcac tgcgggcgcc gagcagcgcg cccacattgg cacacgcgat
     9301 caggagaatg agcccggccg atgccatcag ggcgatcagg gtttcccgca ccccgcggac
     9361 gtcgctccgc tgcagctcct ccactcgcag ccgcaaccca tccggcaata ctcgcggccc
     9421 taccgcctcg agctcgctgg tggcccgttc ggccgacacc cccgcgccga gccgtgcaat
     9481 catgacatgg tcacggtcgt catcttcgcg ttccggcgcc gtgagcggac gccagagatc
     9541 ggcttcgcgg gggagccacc ggccgggagg catgacgccg acgatggtat ggggggagcc
     9601 atcgatggtc aggacccgcc cgatgctctc cggagaccgg gacaatcgat tggtccagag
     9661 cgcgtggctt aggacgacga ccggtgttcc ggcctcgatt tcatcccggt cgaagccgcg
     9721 cccgagcgca ggaaagacgc cgagggttgc gaatagatcc ccggttactc gcgccaccac
     9781 cacatgcgat ggttcgacgc cgggtccggc catcacccgc agcgcctgac tgaacgcggc
     9841 tctcgcgccc aatgcgccga ctccactgaa ggcctcgact tcggagtatg tcagcaggcc
     9901 ctcggcctcc gagggtccat cgctcgagac ccggatcaac tctcgcgctt cgggataagg
     9961 cagcggacga agcaagaccc agtccaccac cgcgaaaacg ccggcgttga cgccaatacc
    10021 gatggcgagg gtgccgatgg cagcggcgct cgagacccgg tggcgccaga gggaccggca
    10081 gccgtagaga aggtcccgcc aggcatcttc gatgaatcgg acgccccgcg cgtcgcgaca
    10141 ttcctccttg acctgctcga ccgcgccgaa atcgaggcgg gcccgccggg ccgcttcgtc
    10201 ctgcgacagg cccagggcac ggtagtgctc cacctgggtc gccaggtggt gccggagctc
    10261 ctcctcgagc tcctgttcca cggctcgccg ccggaaaagc gcccggagcc ggatccgcag
    10321 gtcctcgaac actcggcctc agctgctttc caggaccgtc gcgatggtgg cggagagcct
    10381 gcgccaggcg gcagtatcgc tggcgagctg agcctgtccc cggcgggtaa gctcgtaata
    10441 ccgggctcgc cggccgttga ccgacgtgcc ccagcggccc ttgatccacc cccgccgctc
    10501 caaccgatga agggccgggt agagcgagcc ctggcggatc gacagagtgg cctgggagag
    10561 ctgatggaga cggtgcgaga tcgcccagcc gtgcaggggt tcgagcgcca gcgccttgag
    10621 gatcaggatg tccagcgttc cctggggaag ctccatgcgg tcgtggtcca ctctctaccc
    10681 cattcgcttc gacaggagag agaaggtagt gcgtacctgt cgaagcggaa ggggacgcgg
    10741 cgcaccccgc ctggcgccgt tagtattccg acgatttgga ctgaatgggc cggacagtat
    10801 gccgagagca ccgagcgccg aggcgtttcc gatcgagccc ccgatcgagc ccatgctggc
    10861 caagctggcc gacgccctcc cccccgacgg gacttttctc ttcgagccca agtgggacgg
    10921 cttccgcgcc ctcgtcttcc gcagcacctc cgatctgtac atccagagcc gcgacctcaa
    10981 gccgctggac cgctactttc ccgagctcca cgacgcgttg ctggagcagc tgccccaggg
    11041 atgcgtgctc gacggcgaga tcgtcatcac cacgcccgac gggctcgact tcgacgcact
    11101 tcagatgcgg ctccatccgg cggcgtcccg agtggagaag ctggcgaagg aaacccccgc
    11161 ctcgttcgtc ggcttcgatc tgctggccgc cgatggccgg agcctgatgg aggcgcccca
    11221 gaacgagcgc cggtctcgcc tcgagcggct cctcgccaac gccggcccgc cggtctacct
    11281 cacgcccata acccgggacc ggaaggtggc cgcgcgctgg ctggaggagt tcgagggtgc
    11341 cggcctggac ggcgtgatgg cgaagccggt ggacgcgacc tatcaacccg gcaagcgcac
    11401 catggtcaag gtgaaacatg cccgcaccgc cgactgcgtc gtggccgggt tccgctggca
    11461 caagaccggg aaggatgtga tcggctctct gttgctgggc ctgtatgacg accgcggtct
    11521 gctgcagcac atcggggtca cctcatcgtt caccatggcg atgcgccagc agctggtgaa
    11581 ggagctggcc ccgctgcgtg agcaggcctt cgagaaccat ccctggcggg agtgggctca
    11641 ggccgaagcc gccgggcaga agcggatgcc cggtgggcag agccgctgga gcgcggggaa
    11701 ggatctttcc tgggagccgc tccggatcga gcgggtgtgc gaggtcaagt acgaccacct
    11761 ccaaggcaac cggtttcgcc atgcggccgt cttcctaagg tggcggcccg acaagcagcc
    11821 ccgcgactgc cgctacgacc agctcgaagt gacccggccc tacgagctgg accaggtctt
    11881 ctcgtccggg tcgagcggtt cctgagccgg ccgcagtttc gccggcacgt gctgcagatt
    11941 caccctgatc cggtaccaga gggacgagcg gccccgcatc cggtccacca gaacatccgc
    12001 ctcctccagg tgccccgccg cttcgggatg gcgcgccttc cagcgctcca tccccgccag
    12061 cgcgtcctgc ttgcgcttgg cacggccgat ctcgatcatc ggatgcttcg gctcacgccg
    12121 tttggagggt tgcacccggg gcggctcgcc ctgctgcttc cggtagtggg gcggccaggg
    12181 cgcgtcgcct aacccgtccc gctcctgctc ggccgacagc tcgagcaggc gctcgagcga
    12241 gccggggttc cggtcgatgt cccggtgccg atcgccgatc tgggcgaagc ggccgggcat
    12301 ggtcaccagg gtgaagtcgg cggggtcggc gctgtcgatc tcgtcccagc ctaacggcgc
    12361 cgagacctgc gccagcgggg taggccggac cgaataggcc gaggccacgg tgcggtcttt
    12421 cgcgttctgg ttgtagtcga cgaatacccc gtggcgctcc tccttccacc acttgctggt
    12481 cgcgatgcgg ggagcgcgcc gctccacctc gcgggccagc gccagcgcgg cgcgccgcac
    12541 ctggtcgaag gtccagcgcc gctcgatccg gacattgacg tggatcccgc gtgagccgga
    12601 ggtcttgggc cagccggtga gcccgaagtc tcccagcacc gccgccacca cgtgggccac
    12661 ctgccgcacc tgctcccatt tcacgcccgg caccggatcg aggtcgaccc ggagctcgtc
    12721 gggatgctcc aggtcgtcgg cccgcaccgg gtggggatgc agctcgaggc aggcgaggtt
    12781 ggccagccag gcgagggcgg cggcgtcgcg cggcaccacc tcgtcggcgc tccgccccga
    12841 gggaaaccgc aacgacacca cctcgaccca cgccggccgg gagaccggag ccctcttctg
    12901 gtagaagaac tcgccggcga tgccgtcggg aaagcgcacc agcatgttgg gccggccgcc
    12961 ggcgccccgg agcgcgccgt cggcgacggc gaggtagtag cgcaccaagt cgagcttggt
    13021 gtgccccggc ttgggaaaga gcaccttggc gggattggag atcgcgatct cgcggccgtc
    13081 gactgcgacc agctcggggt cggcgcctgt cgggcgggac gcctcgccac gggaacgggg
    13141 catgcctgaa aggatagccg ggagggacgc ggagcgcccc gcttgacggc ccggtcatcc
    13201 ggtgtaattt caccatatgg ttattttcca ccagcaactg gggcgcctcc gatgagccgc
    13261 ccgactccct cggagctcag ccggcgcgag cgccaggtcc tcgaaaccct ggttcggatc
    13321 gggcgcgcca gcgtggccga cgtcacgctg gccttgtcgg gcaccgtgag ctacgac
//
LOCUS       DASWKS010000461         4437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2106593, whole genome shotgun sequence.
ACCESSION   DASWKS010000461 DASWKS010000000
VERSION     DASWKS010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2106593"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..876)
                     /locus_tag="VGA78_13135"
     CDS             complement(<1..876)
                     /locus_tag="VGA78_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894866.1"
                     /translation="MKYSAAVGEIWRHHDLSNAARDHVSLVRYATLAASSHNTQPWRF
                     KLEPGRIVILPDLSRRCSAVDPDDHHLYASLGCGAENLLLAAQAGGLMGHCSYHASES
                     SLHVSLEAATPSRSPLFEAIPDRQCSRAEYDGTLLPSEQLRLLEEVGSGPGVSVMLLT
                     DAARKDQVAEYVAAGNTAQFSDPHWARELLSWIRFNGRDAVRAGDGLYGPVMGSPDVP
                     RWVGRLFMGLAFSAERQNRKDTTHIRSSSAIAVIFSEADDKQHWIEAGRSYQRIALQS
                     AALELRTAFINQPVEV"
     gene            983..3352
                     /locus_tag="VGA78_13140"
     CDS             983..3352
                     /locus_tag="VGA78_13140"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9894867.1"
                     /translation="MMRCLPGSALRPIVPGFLLVTPLLAQSPEPAGALPYDLAFDRRE
                     LLWSTSLAITADGRRVAWEARRPPTGLPPAERYLPNGTPAASAGAKVYVADLTTNRTV
                     EVCSGGNCWRPSWSPDGKRLAFYSDAGGQPELWVHDVEAGRARKLVAQPIKAKLWIGD
                     QAQWSPSGDMLYVPLAPSGVYRVSVLQPAPKPASDSAAVTVLRSGREAAVASRDSAPA
                     SPLMAHFLRENLAQVAAVDARTGKLTVLVPSEATPKPSVMRVSPSGRWISYLSVFKEQ
                     AVTSQASAMDLAVVPASGGPVRLIAADVPTLEGEYHRLNYNWHPTDDRLVYFKDKRIW
                     LVEMAAAGPSQPRVLAESLGDIAPTVYLFTRDGRALVVGTDPKDDRGYGDARPHGIAL
                     VPLDGSAPTRFAIDDSIGIYRDVLKADDRTIWQPDGQSVTLLLDAPASGGKAVVRFDP
                     RDGSSTVLWKGVARLDRLTGGGSHDAIFGVYEELRTPPDIYRFAPDFSARERISHIEP
                     RLEGLNLGSVELFETIVPFHDGSLGAVRTAVLLPPGAKRGDKLPAVVLMYPGSDVSRA
                     AEELGGGSQLSIPTMLLTSRGFAVVLANLTLGPNREAGNPAQEMTDVLLPQVYRAAEL
                     GYIDISRVGIGGQSFGGFGTAAIISRTNLFRAAVAVSGIYDLPGTYGHHDKSGGSFWI
                     GWNEGGQARMGTHPWANLRRYLDNSPYYQADKIFTPLLIVHGTDDLAYHDGQKLFTAL
                     RRLERPAQFASYAGQGHVISEWTRPNAIDAARRIVDFYRTHLSQPHPIP"
     gene            3411..3704
                     /locus_tag="VGA78_13145"
     CDS             3411..3704
                     /locus_tag="VGA78_13145"
                     /inference="COORDINATES: protein motif:HMM:NF013561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HEX9894868.1"
                     /translation="MPTTKVTFTLDNDTVARIGRTAHRLGTSKSAVVREAVREYAARA
                     GRLSEAEREQLLTTFDAILARPAARTARAVDREVAAVRAARRQGGRRTPPESG"
     gene            3701..4081
                     /locus_tag="VGA78_13150"
     CDS             3701..4081
                     /locus_tag="VGA78_13150"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9894869.1"
                     /translation="MILLDTSVLRDGLCGPRRSAPALRRAIAEGERLVLPALVLYEWY
                     RGPRLEQELEAQEALFPSHACLPFGPEEARQAADLYRQVPGARGREIDLAIAACALGN
                     DARLWTLNLADFAGIPGLMVERPQ"
BASE COUNT          709 a         1514 c         1451 g          763 t
ORIGIN      
        1 cacctcaacg ggctggttga tgaaagcggt ccgcagttcc agagcggcgg actgaagagc
       61 gatacgttga tagctgcgcc cagcctcgat ccagtgctgc ttgtcgtcgg cctcggagaa
      121 gatcaccgcg atggcggaag agctccgaat gtgggtcgtg tccttccggt tctggcgctc
      181 cgcggaaaag gcgagaccca tgaagaggcg tccgacccac cggggaacgt caggactgcc
      241 catcaccggg ccatacaacc cgtcgcccgc ccgcaccgcg tcgcgtccgt tgaagcggat
      301 ccagctcagc agctctcgag cccagtgcgg atcactgaac tgggccgtgt tgcccgctgc
      361 cacatactcc gcaacctgat ccttccgcgc ggcgtccgtc agaagcatga ccgaaacccc
      421 agggccactc ccgacttcct ccagcaggcg gagttgctcg ctcgggagca atgttccgtc
      481 gtattcagcc cggctgcact ggcggtccgg aatggcctcg aagagtgggg accgggaggg
      541 ggtcgccgct tcgagggaca cgtgcaggct cgattccgat gcgtggtagg aacagtggcc
      601 catcagtccc ccagcctggg cggccaggag gagattctcg gctccacagc caaggctggc
      661 atacaggtga tgatcgtccg gatcgactgc ggaacagcgt cgcgagaggt ccgggagaat
      721 cacgattcgg ccgggctcca gcttgaacct ccagggctgg gtattgtggc tggaggcagc
      781 gagcgttgca taccgcacca ggctcacgtg atcacgtgcg gcgttgctga ggtcgtggtg
      841 acgccagatc tccccgactg cggcggagta cttcaagctt tcctccaggc ctaaccccgg
      901 ccgacgaagg tgcattgccc aatcttcctt cggttttcca tgatatgttt gcggagcgac
      961 gtcaacctcg ccgagcaccc ctatgatgcg ctgcttgccc ggctccgcgc ttcgcccgat
     1021 tgtccccggg ttcctgctgg tcacgccctt gctggctcag tcacccgagc ctgcaggtgc
     1081 gcttccatac gacctcgcgt tcgaccggag ggagctgctc tggagcacca gcctggccat
     1141 cacggctgac ggccggcggg tggcgtggga ggcgcgacgg ccaccgaccg gccttccgcc
     1201 cgccgagcgg tatctgccga acggcactcc ggcagcatcc gctggcgcca aggtgtatgt
     1261 cgcggacctc accaccaatc gcacggtcga ggtgtgctcc gggggaaact gctggcggcc
     1321 gtcgtggtca cccgacggca agcggctcgc gttctattcc gatgccggcg gccagccgga
     1381 gctctgggtg catgacgtcg aggcgggccg ggcccgcaaa ctggtggctc aacccatcaa
     1441 agccaagttg tggatcggcg atcaggccca atggagtccc tcgggcgaca tgctctacgt
     1501 gccgctggcg ccgtcgggag tgtaccgggt gtccgtcctc cagcccgctc cgaagccggc
     1561 ctccgattcc gcggccgtga ccgtgctccg gagcggacgc gaagccgcgg tcgcttcccg
     1621 cgattccgcg ccggcatcac ccctgatggc gcacttcctt cgcgagaacc tggctcaggt
     1681 cgccgccgtg gacgcgcgca ctggtaagct gacggtgctg gttccgtccg aggccacacc
     1741 caagcccagc gtcatgcggg tgtcgccctc cggccgctgg atcagttacc tgtcggtctt
     1801 caaggagcag gccgtcacca gccaggccag cgcgatggat ctggcggtgg tgccggcatc
     1861 gggcggcccg gtgcggctca tcgcggcgga cgtccccacc ctggagggcg agtaccaccg
     1921 gctcaactac aactggcatc cgaccgacga tcgcctggtc tacttcaagg acaagcggat
     1981 ctggctggtg gaaatggctg ccgcgggccc gtcccagccg cgggtgctcg ccgaatcgct
     2041 aggagacatc gccccgacgg tctacttgtt tacccgggac gggcgcgccc tggtggtggg
     2101 aaccgatccc aaggatgacc gcggttacgg cgacgcccgt ccgcacggta tcgctctcgt
     2161 gccgctagac ggcagtgcgc cgacccgttt tgccatcgac gattcgatcg ggatctaccg
     2221 cgacgttctc aaggccgacg accgcaccat ctggcaaccc gacggccagt cggtcaccct
     2281 gctgctggat gcgcccgcct cgggcgggaa agcggtggta cggttcgatc cccgcgacgg
     2341 atcgagcacg gtattgtgga agggcgtggc tcggctcgac aggctgaccg gtggtggcag
     2401 tcacgacgcc atcttcggcg tctacgagga gctccgcact cccccggaca tctaccgatt
     2461 tgccccggat ttctctgccc gcgagcgcat ctcgcacatc gagccgcggc tcgaaggtct
     2521 caacctcggc agtgtggagc tgttcgaaac cattgtcccc ttccacgatg gcagcctcgg
     2581 cgcggtgcgc accgcggtgc tgctaccacc cggtgccaag cggggggaca agctgccggc
     2641 ggtggtgctc atgtaccccg gcagcgacgt gtcgcgtgcc gccgaggagt tgggcggcgg
     2701 ttcccagctg agcatcccca ccatgctgct caccagccga gggtttgcgg tggtgctggc
     2761 caacctgaca ctgggcccga atcgtgaggc ggggaatccg gcccaggaaa tgacagacgt
     2821 gctgctgccc caggtctacc gcgccgccga actgggctac atcgacatca gccgggtggg
     2881 catcgggggc cagtcgttcg gcgggttcgg caccgcggcc atcatctcgc ggaccaacct
     2941 cttccgggcc gcggtggcgg tgtcggggat ctacgatctc ccgggcacct acggccatca
     3001 tgacaagtcg ggcgggtcgt tctggatcgg ctggaacgag ggcgggcagg cccggatggg
     3061 aacccacccg tgggccaacc tgagacgcta tctggacaat tcaccatact atcaggccga
     3121 caagatcttc acgccgctcc tgatcgtgca cggcaccgat gacctggcct atcacgacgg
     3181 gcagaagctc ttcaccgcgc tccggcggct ggagcggccg gcccagttcg cgtcgtatgc
     3241 cgggcagggc cacgtgatct cggagtggac tcggcccaac gccatcgacg cggctcgccg
     3301 aatcgtcgat ttctaccgga cgcacctgag ccagccccac cccataccat gaaccttgcc
     3361 gcggccggtg cgattattgc catattacca tacatatggt aatatggttc atgcccacga
     3421 ccaaggtcac attcaccctc gataacgaca ccgtggcccg gatcgggcgc accgcccatc
     3481 ggctcggcac ctccaagagc gccgtggtgc gggaagccgt tcgggaatac gcagcccgtg
     3541 cggggcggct ctccgaggca gagcgggagc agctcctcac caccttcgat gccatcctgg
     3601 cccggcccgc ggcccggacc gctcgggcgg tggaccgtga agtggctgcg gtccgcgccg
     3661 cccggcggca gggaggacgc cgcacgcctc cggagagcgg ttgatcctgc tcgatacctc
     3721 tgtgctgaga gatggtcttt gcggaccgcg gcgctccgcc ccggcgctcc gccgagccat
     3781 tgcggagggc gaacggctgg tgctgccagc cctggtgttg tacgagtggt accgcggtcc
     3841 gcggctggag caggagctcg aggcccagga ggcgctgttt ccatctcacg cctgcctccc
     3901 gtttggaccg gaggaggcac ggcaggcagc cgacctctat cggcaggtgc ccggcgcgcg
     3961 aggccgcgaa atcgacctgg ccatcgccgc ctgtgccctc ggcaacgatg cgcgcctctg
     4021 gactctcaac ctggccgact ttgccggtat tcccggcttg atggtcgaac ggcctcagta
     4081 ggcgcaagta agcaccacgg gccagccggc cgggcttcaa gttccggcac ccagccagtg
     4141 ctggtcaatc gcaatacgcg atcggattcg tctggccgga gtcggccttc cgcctttctc
     4201 cgatggatcg tccgcgtggg gatgagaagg acgtcggcga ccgtcctggc ctgaagctgg
     4261 aggagcgaga gaagtccatc gagttccccc ggtcctcgtg ccgcacgcct gataagggtt
     4321 tagcggactc cgggtcccca gtcatcggtt tcctcgtcgt cgaacccgtc ctgtagcgcc
     4381 cgggcgtccg ggtcctcctc cagctcgctc tgcgcctctg ccagcgcttc ctcatcc
//
LOCUS       DASWKS010000462         3424 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2836300, whole genome shotgun sequence.
ACCESSION   DASWKS010000462 DASWKS010000000
VERSION     DASWKS010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3424
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2836300"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..458
                     /locus_tag="VGA78_13155"
     CDS             183..458
                     /locus_tag="VGA78_13155"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894870.1"
                     /translation="MATLYLAQDLRHGRKVGLKVVRSELSGEADGSTPAYMTPEPAGD
                     ESNLDGRSDLYSLGCVLYETLVGTPPFTGPTVQSVITKRFTEGVGLG"
     gene            455..2704
                     /locus_tag="VGA78_13160"
     CDS             455..2704
                     /locus_tag="VGA78_13160"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894871.1"
                     /translation="MTAATSQISAALGRSYRIERELGAGGMATVYLAHDLKHDRKVAV
                     KVLRPEVAQAVGAERFLSEIKTTANLQHPHILALHDSGEAGGFLFYVMPFVNGESLRD
                     RLTRDKQLPLDDILRIAREVADALDYAHRAGIVHRDIKPENILLSEGHAVVADFGIAR
                     AVTAPEASRLTQVGEMIGTPAYLSPEQVSGDPLDGTSDLYSLGCVLYECLTGELPFHG
                     PLMAMLAQRMISPPPSVRGRRSEVPPQLDQVVAKAMATQTSDRFRNGRELVLALAAAM
                     ASGPAAASGRRSVVVLPFANLSPDPENEYFSDGLTEEIITDLSKVRALSVISRTSAMQ
                     LKGTSKDVRTIGRELGVRYVLEGSVRKAGNNLRITAQLIDAPNDDHLWGEKYSGTLDE
                     VFEVQERVAREIVKALDLKLSSDEDRRLSDHPIADVRAFELYLQARHEMRRYGTSIAR
                     GLSLLARAQEIEGPSVPLQALVAWGKVAQVRSGMVRDHRPIEEAEAAARDLLARAPDR
                     PYGHALLGFIAYERGLIGEAVHHLGAALEREPNDADALLILCLSYLAAAQNEMAADTS
                     RRLMVCDPLSSSSWMAAGVVKWFIGRAGDGLPSLLRAIEMDPDNLIIRWCLGYTHAML
                     GQLAQAAEHASVMRDKAPELPYTRQLSSLVDGVTGRKDQALECLARVDVAGLDAHHKF
                     HLAESFAMAGSIDRALELLGQAVEGGFHPAPFIATHCPFLAPVRSTTRFAELATRAGQ
                     LANEFGRRQ"
     gene            2701..>3424
                     /locus_tag="VGA78_13165"
     CDS             2701..>3424
                     /locus_tag="VGA78_13165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894872.1"
                     /translation="MSGIRNRLAAAQLLVLIGCTSGGEAVPAVRAGDDSEYLYLWTSS
                     ADSSAPDFLAVIAVRPDTGRYGSLITTLPIPGGRNGPHHTEHELAEDRQLFANGFGSG
                     RSFIFDLRDGARPRLAGEFAGQAGLSHPHSFLRLPNGNVLATFQMSHQPSGMAPGGLV
                     ELTPAGQMVRSSSAVAPGVPPGLRPYSGAIVPAIDRIVTSTTDMDADSPYRANQVQIW
                     RLSDLALLHTITLPAGARGNEGD"
BASE COUNT          570 a         1169 c         1155 g          530 t
ORIGIN      
        1 gtcaggaggc cccgaaccag gagggttccg gctccgtagc aggggcttgg cgggccgggt
       61 agaattgctg catccgatga ccaccttggc caggcagagc agtcgatgag gggcgcgacc
      121 gaacggctcg cgaccgcgct ggcaggccgc tacccgatcc agcgcgagct gggccagggc
      181 ggatggccac gctctacctc gcccaagacc tccgccacgg acgcaaagtc gggctcaagg
      241 tggtacggtc agagctgtcc ggcgaagccg acggcagcac ccccgcatac atgaccccgg
      301 agccggccgg cgacgagagc aacctcgatg gtcgaagcga tctctacagc ctggggtgtg
      361 tgctgtacga gacgctggtc ggtaccccgc ccttcaccgg gcccaccgtg cagagcgtga
      421 tcacgaagcg tttcaccgag ggggtcggcc taggatgacc gccgccacct cccagatctc
      481 cgccgcattg ggccggagct accgcatcga gcgcgagctg ggcgccggtg gaatggccac
      541 cgtctacctg gcgcacgatc tcaagcacga ccgcaaagtc gccgtcaagg tgctgcgccc
      601 ggaggtcgct caggccgtgg gcgcggaacg ctttctctcc gagatcaaga ccaccgccaa
      661 cctgcagcat cctcacatcc tggccctgca cgattcgggg gaggcgggcg gcttcctgtt
      721 ctatgtcatg ccgttcgtca acggcgaatc gttgcgggac cggctcaccc gcgacaagca
      781 gctgccgctg gatgacatcc tccggatcgc gcgcgaagtg gcggacgcgc tcgactacgc
      841 ccatcgcgcc gggattgtcc accgtgacat caagcccgag aacatcctcc tgagtgaagg
      901 ccacgcggtg gtggccgact tcgggatcgc gcgggcggtg accgcgccgg aggcgtcccg
      961 gctgacccag gtcggcgaga tgatcggtac gccggcctac ctcagcccgg aacaggtcag
     1021 cggggacccg ctcgacggga ccagcgatct gtacagcctg ggatgcgtgc tctacgaatg
     1081 tctgaccggg gagctgccgt tccacgggcc gctgatggcc atgctggccc agcggatgat
     1141 cagcccgccg ccttcggtcc ggggccggcg cagcgaggtc ccgccccagc tcgatcaggt
     1201 ggtcgcgaag gcgatggcga cccagacgtc ggaccgcttt cgaaacggcc gggagctggt
     1261 gctggcgctg gccgcggcca tggcgtccgg cccggcggcg gccagcggtc gccgttcggt
     1321 ggtggtgctg ccattcgcca acctgagccc ggatccggag aacgagtatt tcagcgacgg
     1381 tctgaccgag gagatcatca ctgacctctc caaggtccgc gccctgagcg tcatctcgcg
     1441 cacctccgcc atgcagctca agggaaccag caaagacgtc cgcaccatcg gacgcgagct
     1501 gggggtgcgc tacgtgctgg aaggcagtgt ccgaaaggcc ggaaacaacc tgcgtatcac
     1561 ggcccagctg atcgacgcgc ccaacgacga tcatctctgg ggcgagaaat acagcggcac
     1621 gctggacgag gtcttcgagg tccaggaacg ggtggcgcga gagattgtca aggccttgga
     1681 cctgaagctg agctcggacg aggaccgccg cctgagcgac catcccatcg cggatgtcag
     1741 agccttcgag ctctacctgc aggcccgcca tgaaatgcgg cggtacggca cctccattgc
     1801 acgcggcctc tcgctgctgg cccgggccca ggagatcgaa ggaccgagcg tgccgctcca
     1861 ggctctcgtg gcctggggca aagtcgccca ggtccgttcg ggaatggttc gggatcaccg
     1921 gccgatcgaa gaggccgagg ccgcggcgcg ggacctgctg gctcgcgccc cggaccggcc
     1981 ctacggacat gcccttctgg gattcatcgc gtacgagcgg ggtctgattg gagaggccgt
     2041 gcaccacctg ggcgcggctt tggagcgaga gccgaacgac gccgacgctc tgctcatcct
     2101 ttgcctgtcg tacctggccg cggcgcagaa cgaaatggcc gcagacacca gccggcgcct
     2161 gatggtatgc gacccgctct cgtcgtccag ctggatggcg gctggggtcg tgaagtggtt
     2221 catcgggcgg gccggggacg ggctccccag cctgctccgc gccatcgaga tggatcccga
     2281 caacctcatc atccggtggt gcctcggcta tacccacgcc atgctgggac agctcgccca
     2341 ggcggcggag cacgccagcg tcatgcgcga caaggcgccg gagctcccgt atacccggca
     2401 gttgtcgtcg ctggtcgatg gggtcaccgg gcgaaaggac caggcgctgg agtgtctcgc
     2461 gcgagtcgac gtggcggggc tcgatgccca ccacaagttc cacctggccg agtccttcgc
     2521 gatggccggg agcatcgacc gggccctcga gctgctgggc caggcggtgg aaggtggctt
     2581 ccaccccgct ccgttcatcg cgacccactg ccccttcttg gccccggtcc ggagtacgac
     2641 caggttcgcg gagctggcga cacgcgccgg ccagctggcg aacgagtttg gacgtcgcca
     2701 atgagcggca tccgcaatag actggccgcc gcccagctgc tggtgctgat cggctgcacc
     2761 tcgggcggcg aggcggtgcc tgcggtccgc gccggcgatg acagcgagta cctctacctg
     2821 tggacttcgt ccgccgacag cagcgcaccc gatttcctcg cggtgatcgc cgtccggccc
     2881 gacaccggcc gttatggttc gctgatcacc acgctgccga tccccggtgg tcgaaacggg
     2941 ccgcatcaca ccgaacacga gctggcggag gatcggcaac tcttcgccaa cggcttcggg
     3001 agcggacggt ccttcatctt cgacctgcgc gacggcgccc ggccacggct cgccggggaa
     3061 ttcgccggcc aggcgggctt gagccatccc cacagcttcc tgcggctccc caatggaaac
     3121 gtcctggcca ccttccagat gagtcaccag ccatccggga tggcgcccgg tggattagtg
     3181 gagttgaccc cggcgggcca gatggtccgt tccagctcgg ccgttgctcc aggagtgccc
     3241 ccggggcttc gaccctattc cggagccatc gtcccggcga tcgaccggat cgtcacctcg
     3301 acgaccgaca tggacgcgga cagtccctat cgggccaacc aggtacagat ctggcggctg
     3361 tcggacctcg cgttgcttca caccatcacc ttgccggctg gtgccagagg caacgagggg
     3421 gatc
//
LOCUS       DASWKS010000463         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_237724, whole genome shotgun sequence.
ACCESSION   DASWKS010000463 DASWKS010000000
VERSION     DASWKS010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237724"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VGA78_13170"
     CDS             <1..1110
                     /locus_tag="VGA78_13170"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEX9894873.1"
                     /translation="AMHRTTEVAKAVIREHYGRDPVRSYFFGCSNGGRQALMEAQRYP
                     GDYDGIVSGAPAISITRIAAGFVKNIQASFPDPSRRTESAISSDNLRLLETRVLAACD
                     ALDGVRDSVVGDPPGCAFQVASLPACPGDQAGPGCLTRSQRAAIERVYTPITNQDGVI
                     YPGQPVGGENWPTGWGMWLSGVNQQLMGGTGGAFPSLQFAFGTEFFKYFVFADSTWDY
                     SRYDFSTWHRDTRLVSTLIDAGNPDLSAFKARGGKLILWHGWADPGLNALETIDYYRE
                     VEKRDPAAREFARLFLLPGVMHCYGGPGPDRVNWFSAISDWVEHSKPPEHLVATKADT
                     TGKTMRTRPICPHPLRAVYRGHGSIDNATNFSCGP"
     gene            1115..>2217
                     /locus_tag="VGA78_13175"
     CDS             1115..>2217
                     /locus_tag="VGA78_13175"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX9894874.1"
                     /translation="MIRPALVLALTWSSVLLSPSPTRAQDRPEPPYRDPRLSTEQRVL
                     DLLGRMTLREKFWQLFMIPGSLDDSSHDFSSGSFGLQISAAPGPGRGSAREHAQRINQ
                     IQRFFVQRTRLGIPIIPFEEALHGLAREGATVFPQAIGLAASWDTALAARVAAAAARE
                     TRSRGIRQVLSPVVNIASDVRWGRVEETYGEDPYLAARMGAAFVREFERAGIIATPKH
                     FVANVGEGGRDSYPIDLSPRLLEEYFFPPFRAALAEGARSVMSAYNSVDGSPATQNRW
                     LLTQKLKREWRFGGFVVSDAAATGGATVLHFTEPNTPTAAQHAFEAGLDVVFQSSYQQ
                     HRPYWDAFHNGRISSAVIDSSVARVLRAKFGLGL"
BASE COUNT          365 a          772 c          693 g          387 t
ORIGIN      
        1 gccatgcatc ggaccacgga ggtggccaag gccgtcatcc gggagcacta cggccgcgat
       61 ccggtccgtt cgtatttctt tggctgctcc aacggtggcc gccaggcgtt gatggaagcc
      121 cagcgctacc ccggagacta cgatggcatc gtctccggcg ccccggcgat ttccatcacc
      181 cgaatcgcgg ccgggtttgt caagaacatc caggcgagct tccccgaccc cagccggcgt
      241 acggagtcgg cgatttcatc cgacaatctt cggctgctcg agacccgggt gctggccgca
      301 tgcgacgcgc tcgacggggt tcgtgacagc gtggtcggcg acccgcctgg ttgcgccttc
      361 caggttgctt cgcttcccgc ctgtcccggc gatcaggccg gtcccgggtg cctgacccgg
      421 tcccagcggg ccgcgatcga gcgggtctac acgcccatca ccaaccagga cggtgtcatc
      481 tatcccggtc agcccgtggg cggggagaac tggcccaccg gctgggggat gtggctcagc
      541 ggcgtcaacc agcagttgat ggggggaacc gggggagcgt ttcccagtct gcaattcgcg
      601 ttcggaaccg agttcttcaa gtacttcgtc ttcgcggatt ccacctggga ttactcccgc
      661 tacgattttt caacctggca ccgggacacg cggctggtct cgaccctgat cgacgcgggc
      721 aatcccgacc tcagcgcctt caaagcccga ggcgggaaac tcatcctgtg gcacgggtgg
      781 gccgatcccg gcctcaatgc cctggaaacg atcgattact atcgcgaagt cgagaagcgc
      841 gatcccgccg cgcgcgaatt cgcccgcctg ttcctgcttc caggcgtgat gcattgttac
      901 ggcggccccg gccccgaccg ggtgaactgg ttcagcgcga tcagcgactg ggtagagcat
      961 tcgaagccgc cagagcacct cgtggcgacg aaggccgaca cgaccggcaa gacaatgcgc
     1021 acccgcccga tctgccccca cccgctgcgg gcggtgtacc ggggacacgg cagcatcgac
     1081 aacgcgacaa acttctcctg cgggccctga ggccgtgatc cggccggcgc tggttctggc
     1141 cctcacgtgg tcttcggtgc tgttgtcccc gtcaccgacc cgagcccagg acaggccaga
     1201 gcctccctat cgggacccac ggctctccac cgagcagcgg gtcctggatc tcctgggtcg
     1261 catgacgctg cgggaaaaat tctggcagct gttcatgatc ccaggcagtc tcgatgattc
     1321 ctcccacgat ttctccagcg gaagcttcgg cctccagatc tccgccgctc ccggtccggg
     1381 ccgaggctcc gcgcgagagc acgcccaacg catcaaccag atccaacgct tcttcgtcca
     1441 gcgcacccgc ctcggcattc ccatcattcc gttcgaggaa gcactccacg gcctggctcg
     1501 cgagggtgca acggtattcc cgcaggccat cgggctggcc gcgagctggg atacggcact
     1561 cgcagcacgg gttgccgcgg cggcagcgcg tgagacccgc agtcgtggca tccgacaggt
     1621 gctgtccccg gtcgtcaaca tcgccagcga cgttcgctgg ggccgagtgg aagagaccta
     1681 cggcgaggat ccctatctcg ccgccaggat gggagccgcg ttcgtccggg agtttgagcg
     1741 ggccggcatc attgccactc ccaaacactt cgtggccaac gtgggcgagg gcgggcgcga
     1801 cagctacccc atcgacctga gcccgcgcct cctggaggag tacttctttc ctccgttccg
     1861 ggccgccctg gccgaggggg cccgctccgt gatgagcgcc tacaattcgg tggatggatc
     1921 gccggcgacc cagaatcgct ggctgctcac ccaaaagctg aaacgcgagt ggcgattcgg
     1981 cggcttcgtc gtctccgatg ccgccgccac cggtggagcc acggtcctcc atttcaccga
     2041 gccgaacacc cctacagcgg cgcagcacgc gtttgaagcg ggactcgacg tcgtgtttca
     2101 gtcgagctac cagcagcatc ggccctactg ggacgccttc cacaacggga ggatcagttc
     2161 cgccgtgatc gactcctccg tcgcgcgggt gctgcgcgcg aaattcggac tcgggct
//
LOCUS       DASWKS010000464         4532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2107463, whole genome shotgun sequence.
ACCESSION   DASWKS010000464 DASWKS010000000
VERSION     DASWKS010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2107463"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1592)
                     /locus_tag="VGA78_13180"
     CDS             complement(<1..1592)
                     /locus_tag="VGA78_13180"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HEX9894875.1"
                     /translation="MARRVKIYRNRTKTGEELNYCRFVKPFQAGAVVLAGILAASASP
                     TRASAQRPLNLDFEMPGTSGPDRPWGWSLGWSAFAGGSAATFALDSVVRRQGRRSLRI
                     ARGDSATTGAPPSIVLQLPADFARGRGLRLTGWIRTERLQQRALLTLEAWKDREFASA
                     DTVAVTPATAAPGKWSRHELTIRVPPEKTVHSVVITAALEGSGAAWFDELELQVDGTP
                     LSALPSTAAPPSPAELAWLGGLANTLHDLRVAPADSVDDSDLARFAEIVGDARIVALG
                     ESTHGTREFFLVKHRLLEYLVRKAGFTLFAIEANQLAVEKINRYVQGGSGAAREVMKV
                     MFRVWNTEEILALVEWMRAYNAAHPDRMVQFVGYDMQDHRTPADSLRAFLERAERVML
                     PRFDLLAGEYRAQRTSATPQIPDSTRARWRRQADLLWKEISEGRPAWLTGAANRKDTM
                     VVEWAVQAANLLRQAARFNVNLSSPERDSLMAANLDWILTTQAPGGRAVVWAHDVHVS
                     RGGDSVLSFNNGAQMGAYLSRR"
     gene            complement(1791..2351)
                     /locus_tag="VGA78_13185"
     CDS             complement(1791..2351)
                     /locus_tag="VGA78_13185"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9894876.1"
                     /translation="MNQKPPGASTAQAAALRVAKLEDIPALQDLIVRSTRGLSRGYYS
                     AEETEAALRHVFGVDTTLIRDGTYFLVERDGAPIGCGGWSYRRTLYGGDQRPMGGPDQ
                     LDPAHEPARIRAFFVAPEAARQGIGRRILTACEEAARRAGFTSLELMATLPGVPFYLA
                     LGFTAVENVTDTLPNGVALRFVRMRR"
     gene            complement(2348..3610)
                     /locus_tag="VGA78_13190"
     CDS             complement(2348..3610)
                     /locus_tag="VGA78_13190"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX9894877.1"
                     /translation="MKESTRVLTSLGAAVAGGILIGASGNTALLRAADLLAPVGTLWV
                     NAIRMTVIPLVASLLITGVASATDVKAIGRLGGRTLVVFVLLLVGAALVVMPFAPAVF
                     SLLPQDPGARPPLPAGAAEAAGQLAAGEQSQTLAGWLTSLIPSNPIAAAATGAMVPLI
                     LFTLFLALAIARSPAPARATLVGFFQALGDAMLTLVRWVVLAAPIGVFALVLPLAARA
                     GTALAGAIGFYIVAYSVGSLLVTALLYPVVALVARIPMGRFARAVLPAQLIAFSSSSS
                     IASLPALVDSAERGLGLPKRISGFVLPLAVSMFKLASPVSWTVGALFVGWFYQIPLHA
                     AELATIAFAAVFLAFAAPGIPRGAFIMLTPLFLAIGLPPEGIGILIAVDVIPDTFSTV
                     LNVTGDLAAAALVARSDGALPAGGPEAT"
     gene            complement(3611..4474)
                     /locus_tag="VGA78_13195"
     CDS             complement(3611..4474)
                     /locus_tag="VGA78_13195"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9894878.1"
                     /translation="MAPGRRNLERVAGPPGLPPLPSSAIFPPPQPGGIIESPSSVPDF
                     TGRVALVTGAARGLGRAAAERLHERGASVAVNVRDTARAEAVAQAFGERGLAVPGDVA
                     AEGVPEAVVSRTLERFGRIDILVNNAAMARSTRFGDLSAREWRETVEVNLTAPFLFTK
                     AVLPAMQAQRYGRIINISSSAGRMVSTLGGAHYTASKAGLLGLTRAAAKELGKFGITV
                     NAICPGMIDTELTQEHATADQLTRLAAGYPVPRLGTAREVADLICFAASEAAGYITGA
                     ALDINGGDLMM"
BASE COUNT          758 a         1535 c         1588 g          651 t
ORIGIN      
        1 taccggcgcg acaggtaggc gcccatctgc gccccgttgt tgaagctgag caccgagtcg
       61 ccgccacgac tcacatggac gtcgtgagcc cacaccaccg cccggccgcc cggcgcctgg
      121 gtggtgagga tccagtcgag attggctgcc atgaggctgt cgcgctcggg cgagctcagg
      181 ttgacgttga acctggctgc ctgccgcagc agattggccg cctgcaccgc ccactcgacc
      241 accatggtgt ctttccggtt cgcggccccc gtgagccagg caggacgacc ctcgctgatc
      301 tctttccaga gcaggtcggc ctggcgtcgc caccgcgcgc gggtggagtc ggggatctgg
      361 ggtgtggccg aggtgcgctg ggcccggtat tcgcccgcca gcaggtcgaa gcgcggcaac
      421 atgacccgct cggcccgctc cagaaatgcc cgcaggctgt cggccggcgt ccggtgatcc
      481 tgcatgtcgt agccgacgaa ctgcaccatg cggtccgggt gggccgcgtt gtaggcccgc
      541 atccattcca ccagcgcgag tatctcctcg gtgttccaga cccggaacat gaccttcatg
      601 acttcccggg ccgcgccgct gccgccctgc acgtagcggt tgatcttctc cacggcgagc
      661 tgattggcct cgatggcgaa cagggtgaaa ccggccttac ggaccaggta ctccagcagc
      721 cggtgcttca ccaggaagaa ctcccgggtg ccgtgggtgg attcgcccag tgcaacgatc
      781 cgggcatcgc ccacgatctc ggcaaagcgg gccaggtcgg aatcatcgac gctgtcggcg
      841 ggggcaaccc ggaggtcgtg gagggtattc gcgagcccgc ccagccaggc gagctccgcg
      901 ggggaaggcg gagccgcggt cgagggcagc gcgctgagtg gagtcccgtc cacttggagc
      961 tcgagttcgt cgaaccacgc cgcgccggat ccctcgaggg cggccgtgat caccaccgag
     1021 tgcaccgtct tctcgggcgg aacccggatg gtcaactcgt ggcgggacca cttgccggga
     1081 gcggcggtcg caggcgtgac ggccaccgta tcagccgagg cgaattctct atccttccag
     1141 gcctcgaggg tgagcaacgc cctttgctgc aaccgctcgg tccggatcca gccggtcagc
     1201 cggagcccgc gtccccgggc gaaatcggcc ggcagctgca gcacgatcga ggggggagca
     1261 ccggtggtgg ctgaatctcc ccgcgcgatg cgcaggctgc ggcgtccctg gcgacggacc
     1321 acactgtcga gggcaaacgt cgccgcggat ccgccggcaa aggccgacca tcccaggctc
     1381 caaccccagg gccggtcggg gcccgaggtg cccggcatct caaagtcgag gttgagcggc
     1441 cgctgggccg atgctcgggt cggactggcg ctcgccgcca ggatcccggc gagaaccacc
     1501 gcccccgcct ggaagggttt gacgaaccgg cagtaattca actcttcccc ggtcttggtt
     1561 cggttccggt agatcttaac acgacgcgcc aacttttcgc gccgcacgga cggctaacat
     1621 ccgtaatccg tgttccgtgt tccgtgttcc gtggttccag gtgccgggtg cggtgctgag
     1681 gtgtcgggtg ctggactgtg cgcttcagcg accgggacac tgggtaccta gcaccgcact
     1741 tggcaccgca ctcaggtact tggaacttgg aacccggaac gcggcgcagg ttaccggcgc
     1801 atgcggacga accggagcgc cactccgttc ggcagggtgt cggtcacgtt ctcaactgct
     1861 gtgaacccga gtgccaggta gaacggcaca ccgggaagcg ttgccatcaa ttccagagag
     1921 gtgaacccgg cccgccgggc ggcttcctcg caagcagtga ggatccgccg cccgatgccc
     1981 tgccgggcgg cttcgggagc gacgaagaag gcgcggatcc gggcgggctc gtgggccggg
     2041 tcgagctggt ccgggccacc catcgggcgc tgatcgccgc cgtagagggt ccgccggtag
     2101 ctccatcccc cgcacccgat gggagcaccg tcccgctcga ccaggaaata cgtgccatcc
     2161 cggatcaggg tcgtatcgac tccaaagacg tggcgaagcg ccgcctcggt ttcctcggcc
     2221 gagtagtacc cccggctgag accgcgggtc gagcggacga tcagatcctg gagcgctgga
     2281 atgtcctcca gcttcgccac gcgaagagcc gcggcttgcg ccgtcgaggc accgggcggt
     2341 ttctggttca cgtcgcctcg gggccgccgg ccggcagcgc cccgtcgctc cgggcgacca
     2401 gcgccgcggc agccagatcg ccggtcacat tgagcacggt cgagaaggta tcggggatca
     2461 cgtccaccgc gatcaggatg ccgataccct cgggcggaag gccgatcgcc agaaacaggg
     2521 gcgtgagcat gataaaggct ccgcgcggga tcccgggcgc cgcaaaggcc aggaacacgg
     2581 ccgcgaaggc aatggtcgcg agctccgcgg cgtggagcgg gatctggtag aaccatccga
     2641 cgaagagcgc tcccacggtc caggagaccg gcgacgccag cttgaacatg gagacggcga
     2701 gcggcagcac gaatccggag atccgtttcg gcagccccag accgcgctcg gcgctgtcga
     2761 ccagagccgg caaggacgca atggaggagc tggagctgaa ggcgatgagc tgggcgggga
     2821 gcaccgcgcg ggcaaatcgg cccatcggga tcctggccac cagggccacc accggataca
     2881 gcagcgcggt gacgagcaga ctccccaccg agtaggccac gatgtagaag ccgatggccc
     2941 cggcgagcgc agtgccggcc cgcgccgcca gcggcagcac cagcgcaaag acgccgatcg
     3001 gagccgccag caccacccag cgaaccagcg tgagcatggc gtcgcccagg gcctggaaga
     3061 accccaccag cgtggcgcgg gccggggccg ggctgcgcgc gatggcgagc gccaggaaca
     3121 aggtaaagag aatcagcggc accatcgccc cggtggccgc ggcggcgatg ggattgctcg
     3181 ggatcaacga cgtcagccag ccggccaggg tctggctctg ctcacccgcg gcgagctgcc
     3241 ccgccgcttc ggccgcgccg gcggggagcg gagggcgcgc gccgggatcc tgtggcagca
     3301 gggagaacac cgccggggcg aagggcatga ccaccagcgc cgcgcccacc agcagcagca
     3361 cgaacacgac cagggtgcgg cccccgagcc gtccgatcgc cttcacgtcc gtggccgacg
     3421 cgacacccgt gatcaggagg gaagccacca gcggaatcac ggtcatgcgg atggcgttca
     3481 cccatagcgt cccgaccggg gccagcagat cggccgcgcg cagcaacgcc gtgttccccg
     3541 atgcgccgat caggatgcca ccggcgaccg ccgcgccgag agaggtgagg actcgggtgc
     3601 tttccttcat ctacatcatc aggtcgccgc cgttgatgtc gagcgcggcg ccggtgatgt
     3661 agccggccgc ttcggaagcc gcgaagcaga tcaggtcggc cacttcccgc gccgtgccca
     3721 gccgcggcac cgggtatccg gcggccaggc gggtcagctg gtccgctgtg gcatgctcct
     3781 gggtcagctc ggtgtcgatc atgccgggac aaatcgcgtt cacggtgatc ccgaactttc
     3841 ccaactcctt cgcggcggcg cgagtcagcc ccagcaggcc cgccttggag gcggtgtagt
     3901 gggcgccgcc caaggtgctc accatgcggc cggccgagga cgagatgttg atgatccggc
     3961 cgtatcgctg ggcctgcatg gccgggagca ccgctttcgt gaagagaaag ggagcggtga
     4021 ggttcacttc cacagtctcg cgccattccc gggcggagag gtcaccgaag cgggtggatc
     4081 gtgccatggc ggcgttgttg accagaatgt cgatgcgccc gaagcgttcc agagtgcggc
     4141 tcacgacagc ttccggcacc ccttcggccg ccacatcgcc cggcacggcc agtccgcgct
     4201 caccaaatgc ctgcgccacc gcctcggccc gggcggtgtc acggacgttg acggcgacgg
     4261 aggcgccgcg ctcatgcagc cgctcggcgg cagcgcgccc cagcccgcga gcggcgccgg
     4321 tgacgagggc gactcgtccc gtgaaatccg gaaccgagct gggggactcg atgatgccgc
     4381 ctggttgggg aggcgggaat atggcgctcg acgggagtgg cggcaaaccg ggtgggccgg
     4441 ctacccgttc cagattccgc cttccgggtg ccacgtgcgg tgcacagtgc ggtgctgggt
     4501 gacatgtgct gcgtgagaat ctcagctcat ca
//
LOCUS       DASWKS010000465         1973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1343813, whole genome shotgun sequence.
ACCESSION   DASWKS010000465 DASWKS010000000
VERSION     DASWKS010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343813"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..444
                     /locus_tag="VGA78_13200"
     CDS             136..444
                     /locus_tag="VGA78_13200"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894879.1"
                     /translation="MTVCTLAYMAPEQAAADPAADHRVDLYAAGVVAYEMLAASPPFT
                     ASTPQAVLAAHVTQPPDPITTRRPDTPAALAAIVMRCLEKQPDARWESADQPIGCRTC
                     "
     gene            429..683
                     /locus_tag="VGA78_13205"
     CDS             429..683
                     /locus_tag="VGA78_13205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894880.1"
                     /translation="MSYLLTRAEAASRAGEAGAARVWFDSARVQLEDPSFQLPVAAIR
                     NSLLGVALAGLGRADEAVTEAFRATQMVPVSLDALWGTSL"
     gene            699..866
                     /locus_tag="VGA78_13210"
     CDS             699..866
                     /locus_tag="VGA78_13210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894881.1"
                     /translation="MYCRTGNHAKAIATLSELLAAPGILSPALLKVDPAWDPLRDEAA
                     FQRLVAGPSRD"
     gene            957..>1973
                     /locus_tag="VGA78_13215"
     CDS             957..>1973
                     /locus_tag="VGA78_13215"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX9894882.1"
                     /translation="MSTRDVNPFETANAGFAQALYEDFLRDPASVSPEWRELFQAGII
                     GELPESRIASRESRDGPEAPGTRNGATVAAPAAPERTEVKGPAARLAANMEESLGVPT
                     ATTFRQIPVSVLEARRTQLNQALAAADRNLKLSFTHLIAYALVLAWKRHQSMGHSYRA
                     IDGTAYRITPSHLGLGLAVDVERKDGSRGLVVPVIKQADTMDFAAFHATYESLVEKAR
                     SNRLLPDDFAGGSITLTNPGGLGTSTSMARLMAGQGTIIATGAIAYPPEFTATPRERL
                     TELGIAKVMWLSSTYDHRVIQGAESGEFLRTVEQLLGGGDGFYDAVAEALGIGLEAGG
                     RAGGP"
BASE COUNT          323 a          683 c          666 g          301 t
ORIGIN      
        1 ttcgcgcgca accgcgagtg gggcatcggg acatcaaacc cgacaacgtg ctgctgtccg
       61 gtcggcgcgc ggtcatcacc gacttcggcg tggccaaggc actcaccggc cagtggatcg
      121 ggcaccaccg tgggaatgac cgtctgcacg ctggcctata tggcgccgga gcaggcggcc
      181 gccgacccgg cggcagacca tcgagtggac ctctatgcgg cgggcgtagt tgcctacgaa
      241 atgctggcgg ccagcccgcc attcacggcc agcacgccgc aggccgtcct cgcggcccac
      301 gtcacccaac cccccgatcc catcaccacc cgacggccgg acacgccggc ggcgctggcg
      361 gccatcgtca tgcgctgcct ggaaaaacaa ccggatgcga gatgggagtc ggcggatcag
      421 ccgatcgggt gtcgtacctg ctgaccaggg cggaagcagc cagccgcgca ggggaagcgg
      481 gggcagcccg ggtgtggttc gactccgccc gggtccagct ggaagaccca tcgttccagc
      541 tgccggtcgc cgccattcgg aacagtctgc tgggtgtggc gctggccggc ctcggccgcg
      601 ccgacgaggc cgtcaccgaa gctttccggg ccacccagat ggtcccggtg agcctggacg
      661 ccctgtgggg gacgtcgctc tagcagaacc tggcgctggt gtactgcaga accggcaacc
      721 atgccaaggc catcgctacc ctctcggaac tgctcgccgc tcccggcatc ctctctcctg
      781 ccctgctcaa ggtcgatccg gcctgggatc cgctccgaga cgaggcggca ttccagcggc
      841 tcgtcgcggg cccctcgcgc gattagtttt cgttcacgat tcacgggtcg ctgggggtcg
      901 ggactgtccg gtcctggagc ccgcgatccg tgactcgtga ctgtcatgga gatcttgtga
      961 gtacccgaga cgtcaatccc ttcgaaaccg ctaacgcggg gttcgcccag gccctctatg
     1021 aggacttcct gcgcgacccc gcgtcggtgt ctccggaatg gcgggagctg tttcaagcgg
     1081 ggatcatcgg ggaacttccg gagtcgcgca tcgcgagtcg tgagtcgcga gatggtccgg
     1141 aggcacccgg aactcggaac ggggccacgg tggcggcgcc ggcggcgccg gagcggaccg
     1201 aagtcaaagg ccctgccgcc cggctcgccg ccaacatgga ggagagcctc ggcgtcccta
     1261 ccgccaccac cttccgccag atcccggtca gcgttctcga ggcccggcga acccagctca
     1321 accaggcgct cgccgccgcc gatcgaaacc tcaaactctc attcacccac ctgatcgcct
     1381 acgccctggt cctggcgtgg aagcgccatc agagcatggg ccacagctac cgggccatcg
     1441 acgggaccgc gtaccgcatc accccgtcgc atctggggct gggactggca gtggatgtgg
     1501 agcggaagga tggctcgcgg gggttggtcg tcccggtcat caagcaggcc gacacgatgg
     1561 acttcgcggc cttccatgcc acctacgagt ccctggtcga gaaagcccgg agcaaccggc
     1621 tgctgccgga cgacttcgcc ggcggcagca tcacgctcac caatcctgga gggctgggaa
     1681 cctccacctc gatggcgcga ctgatggccg gccagggcac catcatcgca accggggcca
     1741 tcgcttatcc ccccgagttc accgccaccc cgcgggagcg cctgacggag ctcgggatcg
     1801 ccaaggtgat gtggctctcc agcacctatg accatcgcgt gattcagggg gccgagtcgg
     1861 gcgagtttct ccgaacggtg gagcagttgc tcggcggagg cgacgggttc tacgacgcgg
     1921 tagcggaagc actcgggatc gggctcgagg cgggcgggcg ggcgggcggg ccg
//
LOCUS       DASWKS010000466         4028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2108660, whole genome shotgun sequence.
ACCESSION   DASWKS010000466 DASWKS010000000
VERSION     DASWKS010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2108660"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..628
                     /locus_tag="VGA78_13220"
     CDS             <1..628
                     /locus_tag="VGA78_13220"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9894883.1"
                     /translation="NAVWSWAEAAGFTLATLTSWRMLTTRARLRAGETVLIWGIGGGV
                     ALASVQIAVLLGARVVATSSSNAKLEVARQLGAEVTLNHGSADVAREVRSLTGVGADV
                     VLDCVGEKTWESSLKALRPLGRFVTCGATTGPQVALDLRRLFWFQWSLLGSTMGNDRE
                     FREIVALGERGSLRPVVDSVVPLDEGRAAFARMTEGRQLGKLVIEVTQ"
     gene            625..1353
                     /locus_tag="VGA78_13225"
     CDS             625..1353
                     /locus_tag="VGA78_13225"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894884.1"
                     /translation="MNELWRRILVGAESLGIVLPALIGAVIILLTGYLLARQVERWTD
                     HLLRRMEFNKMAQAGGLTEAMERAGTRLDPVHAIGKLLFWLVMLVVILLSATALGLES
                     INQMFGMMLSYIPTLIAAIIIVILGMIVGEFVRALVLASAGAVVGVPTLAKVAKTAVI
                     LIAIFMALQQVGVAPEIVTSAFTLIVGAVALAVGLAFGLGNRELAGEITRRWYEEGRL
                     RQHAASSAPPEPSEESKTSEERVA"
     gene            complement(1371..2003)
                     /locus_tag="VGA78_13230"
     CDS             complement(1371..2003)
                     /locus_tag="VGA78_13230"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEX9894885.1"
                     /translation="MLRTTIRLACASLLAVAACSDASSPEGTSRVTLLLTDAPGDLLE
                     AVVTIDEIYLQGGEGEGEEAEGAGRVVLLSEPVTVDLLTLADEWMTLVEGAEIPEAQY
                     GQLRFVISGGYVKVEQEDGDKIFASSADYAELPEGAEVTGELQMPSFSSSGLKVSFTG
                     GLAIDDETILLIDFDVAESFGQETGSGKWVLHPVLTGSVLDDNAAPAKGR"
     gene            complement(2276..3169)
                     /locus_tag="VGA78_13235"
     CDS             complement(2276..3169)
                     /locus_tag="VGA78_13235"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEX9894886.1"
                     /translation="MLRKTFWLAGALALTLAACDDDDDDLVTPPGTTSVTILLTDAPG
                     DILDAVVTIDQAFVQGTGVSRVDLLDAPVTVNLTDLANTTSELLSGAEVTNGTYSDLR
                     LVISGAFVEVENEDGSSTIFASSPDYSGLPEGATVGGELTLPADAASGSLVDFAEDLA
                     LDGGSVSLLADFNVSQSFTDGGTGAWTLQPVLRGAAAGDAATVTVTLALGADVTLPEG
                     VTLAGFTADLGGERLAFAEVGGTFTAAFSFVLPGTYALSLIGPAGLTLTTDPALPVDV
                     VVGAAGAVTQTVTITAATPAP"
     gene            complement(3460..>4028)
                     /locus_tag="VGA78_13240"
     CDS             complement(3460..>4028)
                     /locus_tag="VGA78_13240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894887.1"
                     /translation="MSGDGARFDTAARLSPLDVAEVLERGVRRFERRVFSGQDRWGVL
                     RDGTVWLARVYRNEVTWIEPSGKRLQGPALPDRVIEVSRVDREHWLLQFPEELRSTAE
                     RLPYSPIKPPFENGLTTAGGQVWLEKSRPATDSVRTYHVIDRRGELSRVLILPSRQGH
                     IIAVGDTVALVAEQWREGVRLMQVRIPN"
BASE COUNT          686 a         1343 c         1311 g          688 t
ORIGIN      
        1 caacgccgtg tggagctggg cggaggcggc cggtttcacc ctcgcgaccc tgacttcgtg
       61 gcggatgctg acgactcgcg cccgactccg agccggggag acggtgctga tctggggcat
      121 cggtggtggc gtggcgttgg cctccgtgca aatcgcggtg ctgctggggg cccgggtggt
      181 cgccaccagc tcttcaaatg cgaaactcga agtggcacgc caacttgggg ccgaagtgac
      241 cctcaaccac ggcagcgctg acgtggcccg cgaagtgcgg agcttgaccg gggttggcgc
      301 cgacgtcgtg ctggattgtg tcggcgaaaa gacctgggag tcttccctca aggctctccg
      361 gccgctgggg cgattcgtca cgtgtggcgc caccaccgga ccccaggttg ccctcgacct
      421 ccgccggctc ttctggttcc aatggagtct gctgggatca accatgggca atgaccggga
      481 attccgtgag attgtggcgc tgggggaacg gggttctctg cgcccggtgg tcgatagtgt
      541 cgtgccgctg gacgaaggcc gggccgcctt cgcccggatg accgagggcc gtcagctcgg
      601 gaaactcgtg atcgaggtta cccaatgaac gaactgtggc ggcgaatact ggtcggtgcc
      661 gagtcgctcg ggatcgtgct cccggccctg atcggcgccg tgatcatcct gctcaccggc
      721 tacctcctgg cgcgccaggt ggagcggtgg accgaccatc tgctgcgccg gatggagttc
      781 aacaagatgg cccaggccgg cggcctgacc gaggcgatgg aacgagccgg tacccggctc
      841 gacccagtcc acgcgatcgg caaactgctc ttctggctgg tcatgctggt ggtgatcctg
      901 ctgtccgcca ccgcgctcgg gttggagagc atcaatcaga tgttcggcat gatgctgtcc
      961 tatatcccca cgctgatcgc ggcgatcatc atcgtgattc tcggcatgat cgtcggcgaa
     1021 ttcgtccggg ctctggtcct cgcgtcggcc ggcgcggtgg tcggagtgcc aaccctggcc
     1081 aaggtggcca agaccgccgt gattctgatc gccatcttca tggcgctgca gcaggtgggc
     1141 gtggcccccg agatcgtgac gtcggccttc accctgatcg tcggtgcggt ggcgctggcc
     1201 gtgggtctcg cgttcggtct gggcaaccgc gagctggccg gtgaaatcac ccggcgatgg
     1261 tacgaagaag gacggctccg gcagcacgcc gcaagctcgg cgccgccgga accgtctgaa
     1321 gagtcgaaaa cgtcggagga gagggttgct taggcggtca ccatcggccg ctagcggccc
     1381 ttcgccggcg ccgcattatc gtccagcacg ctccccgtga gcaccgggtg aagcacccac
     1441 ttcccggagc cggtttcctg tccaaagctc tcggccacat caaagtcgat cagcagaatc
     1501 gtctcgtcgt cgatcgccag gccaccggta aaactcacct tgagtccgga gctgctgaaa
     1561 ctgggcatct gcagctctcc ggtcacctcc gccccctcgg gcagctcggc atagtcggcc
     1621 gacgaggcga agatcttgtc gccgtcttcc tgctcgacct tgacgtatcc gccactgatc
     1681 acgaagcgca actgcccgta ctgcgcttcc ggaatctcgg ccccttccac caaggtcatc
     1741 cattcatcgg ccagggtgag cagatcgacc gtcaccggtt cgctgagcag gacgacccgg
     1801 cccgcccctt ccgcttcctc gccttcgcct tctccgccct gcaggtagat ctcgtcgatg
     1861 gtcaccaccg cttccaggag gtcgcccggg gcatcggtga gcagcagagt cacccggctg
     1921 gtgccttccg gactggaagc gtcggaacag gcagcgaccg ccaagagtga ggcgcacgcc
     1981 agtcgaatcg tggtgcgaag catgagtcca tcccgtgagt aaggttacgc cgttaatcca
     2041 gcaattcccg tactgccggc accaccagaa ggccggtctc caaactcccg cgcgagcacc
     2101 aacttgagcc cctatcgcgc aggccgtacg ataactcgac gccggatgat ggggaaaacg
     2161 cacgccttcg ccacgccaca tgctagcctg ccccactcac aaggacggga accagtcagc
     2221 cccagtggcc ggcgccgaat cggcagccgg cgaccaggtg aacggctgat gcgcgctatg
     2281 gtgcgggagt ggcggcggtg atggtgaccg tctgcgtcac tgcaccggcg gcgccgacca
     2341 cgacatcgac cggcagagcc ggatcggtag tgagggtgag tccggcggga ccgatcagac
     2401 tgagagcgta ggtacccggc agtacgaagg agaaggcagc ggtaaaggtc ccgcccacct
     2461 cggcgaatgc cagcctctca ccacccagat cggcggtaaa gccggccagc gtgacgcctt
     2521 ccggcagcgt gacatcggca ccgagcgcca gggtgaccgt gaccgtagcg gcgtcgccgg
     2581 ccgcggcgcc ccggaggacc ggctgcaggg tccaggcccc ggtgccgccg tcggtgaagc
     2641 tctgtgacac gttgaagtcg gccagcaggg aaacgctgcc gccatccagc gcgaggtcct
     2701 cagcgaagtc caccagactt cccgaggccg catcggccgg cagggtcagc tccccgccca
     2761 ccgtggcgcc ttccggcagg cccgagtagt cgggagagga ggcgaagatg gtggagctgc
     2821 cgtcctcatt ctccacctcg acgaaggcgc cgctgatgac caggcggagg tcgctgtacg
     2881 tgccgttggt gacttcggcc ccggacagga gctcgctggt ggtgttagcc aggtcggtca
     2941 ggttgacggt gaccggggcg tccagcaggt ccacccggct caccccggtc ccctgcacga
     3001 acgcctggtc gatggtgacc accgcatcga gaatgtcacc cggggcatcg gtcagcagaa
     3061 tggtcacgct ggtggtgccc ggcggagtca ccagatcatc atcgtcgtca tcacatgcgg
     3121 cgagcgtgag cgccagcgcg cctgcgagcc aaaatgtctt gcgaagcatt gcatgttccc
     3181 cttgctggtt ccggtggtga cgtgttagtc ccatccgtgc gaagcacggt taggcatttg
     3241 cgcgagccgt aattggtgag acgagcgtga ccgcgtgatt cggacatcac tccaaagagc
     3301 gaatggcccg ctcgtaccaa cagtgcacga tgatgtgacg tgtgctacgt accagctcgt
     3361 cgtggtcacg cgaccgttcc gaaaaacatg cgagccccgc gttcctggga gcggaacacg
     3421 gggcccggtg ggtcggcggg aagcgcccgc gaccggcgac tagttgggta tcctcacctg
     3481 catcagccta acgccttccc tccactgctc cgccaccagc gccacggtat cgcccaccgc
     3541 gatgatgtgg ccctgacgac tcggcaggat caacacccgg ctcagttcgc cccggcgatc
     3601 gatcacatga taggtccgca ccgagtcggt cgcggggcgg ctcttctcga gccacacctg
     3661 gccgccggcc gtggtcaacc cgttctcgaa cgggggcttg atgggggaat acggcagtcg
     3721 ttccgcggta ctgcggagct cctccgggaa ctgcagcagc caatgctccc ggtccacccg
     3781 gctgacttct atgacccggt cggggagagc cgggccctgg agccgtttgc cggacggctc
     3841 gatccaggtg acttcgttgc gatacaccct ggccaaccac accgtcccgt cgcgcagcac
     3901 cccccagcgg tcctgtccgc tgaagacccg ccgctcgaac cgacgcacgc cccgttccag
     3961 aacttctgcc acgtcgagag gtgacaaccg ggccgccgtg tcgaagcgag ccccgtctcc
     4021 gctcatcc
//
LOCUS       DASWKS010000467         3507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2109481, whole genome shotgun sequence.
ACCESSION   DASWKS010000467 DASWKS010000000
VERSION     DASWKS010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2109481"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1795)
                     /gene="glgP"
                     /locus_tag="VGA78_13245"
     CDS             complement(<1..1795)
                     /gene="glgP"
                     /locus_tag="VGA78_13245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEX9894888.1"
                     /translation="MTNVLRTKVPALPPGLEGLATLAANLSWSWHRQARALFRTVDEV
                     TWHRCRHNPIQFLNAVEPARLEGIAADPTFRAELERVLQWMEGERSNELTWFGRTWPD
                     LREHPVAYFCAEFGLHNSVPIYSGGLGILAGDHCKAASDLGVPLVALGLFYQKGYFDQ
                     RIRLDGWQEDSDEVVDPASIPVTPLVGMNGVPHVAVVQTFGRPVHVRVWSIQVGRVPI
                     YLMDTALEQNHPDDRALLNKLYGEGEDLRLRQEWILGAGGVKVIRAVGVEPAVWHANE
                     GHAAFMLLERIRELVAQGASFEEAVAAVRYSSVFTTHTPVPAGHDNFDADHVAECIGP
                     VWEELGVAREHLFKLAENPRQPGRFDMTALALRLSTHVNGVSRRHGAVSRSMWSELWP
                     GHTVDQVPIGAITNGVHMATWMANQMMELLDRHLGPDWWTRLNEPDLLERIGSVDDAA
                     LWAVHLQLRDILFRFIREDARRRFADDWKEATQVVGAGALLDPSAFTIGFARRFATYK
                     RANLIFRDPERLHRLLVDARQPVQLVVAGKAHPADTPGKEVLQSVYRFTHDPFYEGRV
                     AFIEDYGMYPAHVLVQGVDLWLNLPRVPMEAS"
     gene            complement(1797..>3507)
                     /gene="ettA"
                     /locus_tag="VGA78_13250"
     CDS             complement(1797..>3507)
                     /gene="ettA"
                     /locus_tag="VGA78_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX9894889.1"
                     /translation="SMATHIFSVAMPTYQYIFTMQDLRKVVPPSREILKGIYLAFFPG
                     AKIGVLGANGAGKSSLLRIMAGVDQDFQGDARPAEGIRIGFLPQEPQLDPAKDVRRNV
                     EEAVAPIRDLLTQFEALSLRFAEPMNDAEMNRLLEQQGELQTRIESIGAWELDRKIDI
                     AMDALRLPPGEADVSTLSGGERRRVALCRVLLEQPDLLLLDEPTNHLDAESVAWLEQH
                     LAQFPGTVVAVTHDRYFLDNVAQWILELDRGAGIPWKGNYSSWLDQKQNRLAREEKQA
                     SARQRTLQRELEWIRMAPRARQAKSKARINAYESLVAEERQARDASAEILIPAAPRLG
                     DEVVVARDVAKGYGDRLLFERLNFALPRGGIVGIIGPNGAGKTTLFRMITGTEQPDAG
                     ELKLGSTVQISYVEQSRESLNPDHTVYQEVSGGEDTLDFGNREVNARAYCASFGFRGA
                     DQQKRVGNLSGGERNRLNLAKLLRTGGNLLLLDEPTNDLDVDTLRALEEALLAFSGCV
                     VVISHDRWFLDRIATHMLAFEGDSEVYWYEGTYSDYAADYHRRKGVAVDQPHRIRYKK
                     LVH"
BASE COUNT          562 a         1203 c         1132 g          610 t
ORIGIN      
        1 cgctcgcttc cataggcacc cggggcaggt tgagccagag gtccaccccc tgcaccagca
       61 cgtgggccgg gtacatcccg tagtcctcga tgaacgccac ccgcccctcg tagaacggat
      121 cgtgggtgaa tcggtatacg ctctggagca cctcttttcc gggcgtgtcg gcgggatggg
      181 ccttgcccgc gacgaccagc tgcaccggtt gccgggcgtc gaccagcagg cgatgcagcc
      241 gttccgggtc ccggaagatc agattggcgc gcttgtaggt ggcgaaccgg cgggcgaacc
      301 cgatggtgaa cgcgctggga tcgagcagcg ccccggcccc caccacttgg gtcgcttcct
      361 tccagtcatc cgcgaaacgg cgccgcgcat cctcccggat gaaccggaag aggatgtccc
      421 ggagctggag atggaccgcc cacaacgccg catcgtccac cgagccgatg cgctccagca
      481 gatcgggttc gttgagccgg gtccaccagt ccggccccag atgccggtcc agcagttcca
      541 tcatctggtt ggccatccag gtggccatgt gcacgccgtt ggtgatggcg ccgatgggga
      601 cctggtcgac ggtatgtccc ggccacagct cgctccacat cgagcgcgac acggccccgt
      661 gccgccggga caccccgttg acgtgggtgg aaagccggag cgccagcgcg gtcatgtcga
      721 atcggcccgg ctgcctcggg ttctccgcca gcttgaacag atgctcccgc gcgacaccca
      781 gctcctccca caccgggccg atgcactccg ccacatggtc ggcgtcgaag ttgtcgtgac
      841 cggctggaac cggcgtgtgg gtggtgaaca ccgaggagta gcgcacggcc gcgacggcct
      901 cctcgaacga agcgccctgt gccaccagct cgcggatccg ctccagcagc atgaaagcgg
      961 catggccctc gttggcgtgc cacacggccg gctccactcc cacggcccgg atcaccttga
     1021 ccccgccggc gccgaggatc cactcctgcc ggagccgaag gtcctcgcct tcgccgtaca
     1081 gcttgttgag caaggcccgg tcatcgggat ggttctgttc cagcgccgtg tccatcaggt
     1141 agatcggcac ccggcccacc tggatggacc agactctgac atgcaccggc cggccgaagg
     1201 tttgcaccac cgccacatgg ggtacgccat tcatcccgac cagcggcgtc accgggatcg
     1261 aggccgggtc taccacctcg tcgctgtctt cctgccagcc gtcgagccgg atgcgctggt
     1321 cgaagtagcc cttctggtag aacaatccca gcgccaccag cgggacgccc aggtccgacg
     1381 cggccttgca atggtcaccg gccagaatgc cgaggccgcc ggaatagatg ggcaccgagt
     1441 tgtgcagccc gaactcggcg cagaagtagg ccaccgggtg ctctcgcagg tcaggccagg
     1501 tgcggccgaa ccaggtgagc tcgttcgatc gctcgccctc catccattgc agcacccgct
     1561 ccagctcggc ccggaaggtc gggtcggccg cgatcccttc cagccgagcg ggctccaccg
     1621 cgttgaggaa ctggatgggg ttgtggcggc agcggtgcca ggtgacttcg tccacggttc
     1681 tgaagagggc ccgcgcctgg cggtgccagc tccatgacag attcgcggcg agggtggcga
     1741 gcccctccag cccgggggga agcgccggga ctttggttcg caacacgttg gtcacgtcag
     1801 tgtaccagct tcttgtacct gatccgatgc ggctgatcga ccgccacgcc cttgcgccgg
     1861 tggtagtccg cggcgtagtc ggagtaggtc ccttcatacc agtacacttc gctgtctccc
     1921 tcgaatgcga gcatatgggt ggcgatgcgg tccaggaacc agcggtcgtg gctgatcacc
     1981 acgacacacc ccgagaaggc cagcagggcc tcctccaggg cgcgcagcgt gtccacatcg
     2041 agatcgttgg tcggctcgtc cagcagcagc aggttgccgc cggtgcggag cagcttggcc
     2101 aggttcagcc ggttgcgctc gccgcccgag agatttccca cccgcttctg ctgatcagcc
     2161 ccccggaagc cgaaactggc gcaataggcc cgggcgttca cttcgcggtt gccgaagtcg
     2221 agcgtgtctt cgcctccgga gacctcctgg tacaccgtgt ggtcggggtt gagggattcc
     2281 cggctctgct ccacgtagga gatctgcacc gtggatccca gcttgagctc acccgcgtct
     2341 ggctgctcgg tgccggtgat catccggaac agcgtggtct tcccggcgcc gttgggtccg
     2401 atgatcccga cgataccgcc gcgggggagc gcgaagttga gcctctcgaa caacagccga
     2461 tcaccgtacc ccttggccac gtccctggcc accacgacct catcgcccag gcggggcgcc
     2521 gccgggatca ggatttcggc gctggcatcc cgggcctgcc gctcctccgc caccagcgat
     2581 tcataggcgt tgatccgggc cttggacttg gcctggcggg ctcggggcgc catccgaatc
     2641 cactccagct cgcgctgcaa ggtccgctgc cgggccgagg cctgcttctc ttcccgcgcc
     2701 aatcggttct gcttctggtc cagccaggag gagtagttgc ccttccaggg gatgcccgcg
     2761 ccgcgatcca gctccagaat ccattgcgcc acgttgtcga ggaagtagcg gtcgtgggtg
     2821 accgccacca cggtgccggg gaactgggcc agatgctgtt ccagccaggc caccgattcg
     2881 gcatccagat ggttggtcgg ctcatccagc aagagcaggt cgggttgctc caacagcacc
     2941 cggcagagtg ccactcgccg ccgctcgccg cccgacagcg tgctcacatc ggcctcgccc
     3001 ggcgggagcc gcagcgcgtc catggcgatg tcgatcttgc ggtcgagctc ccaggcgccg
     3061 atcgattcga tccgggtctg aagctcaccc tgctgctcca gcagccggtt catctcggcg
     3121 tcgttcatcg gctcggcgaa tctgagactc agcgcttcga attgggtgag gaggtcgcgg
     3181 atcggtgcga cggcttcctc cacattgcgg cgcacgtctt tggcgggatc gagctgcggt
     3241 tcctgcggca gaaaaccgat ccggatccct tcggccggac gcgcgtcacc ctggaagtcc
     3301 tgatccactc cggccatgat gcgaagcagg gagctcttcc cggcgccgtt ggcgcccagc
     3361 acgccgatct tggcgccggg gaagaaggca aggtatatcc ctttgaggat ctcgcggctc
     3421 ggcggcacca ccttgcgcag atcctgcatc gtgaagatgt attgataggt cggcatggcg
     3481 acggaaaata tatgggttgc catgctc
//
LOCUS       DASWKS010000468         3289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1739631, whole genome shotgun sequence.
ACCESSION   DASWKS010000468 DASWKS010000000
VERSION     DASWKS010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3289
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1739631"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="VGA78_13255"
     CDS             <1..1426
                     /locus_tag="VGA78_13255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9894890.1"
                     /translation="LTLDFGWLPPAVASGIGLDTRGSFASSEIASAVTLGDGQWLTLP
                     RDAARAAQAIRPFSARDADRWPGFTTRLARIAGFLEALYQLPAPDLDTTSVHEILPLL
                     GVAGKLRRLGRDDMIELLRILPMAIQELVDDTFESEPLKAAIAAAGIQDIRQGPRSGG
                     TTFVLLHHLVGADAGSIRGRPAWTKGPNALANAIEDAARGAKVTIRAVTDVARITVVD
                     ERVTGIVLGSGEEISAPVVLSTLDPARTLLGLVDPVWLDPEFLQAVKNIKFRGCRATA
                     LFALDGLPEQAWGDGVVSLTPDTLTLERAYDAAKYGQVSERPHVEFAVPTLRWPDLAP
                     HGKHVVVAHVQYVPYQQAVNNEQSTAARDDLADTVTRLIDEAVPGFAARVRHRVCNTP
                     NDLEHRFGITEGAVTHGELTLDQILFMRPVPGWGRHEMPIAGLYLGGVGTHPGPGVLG
                     GPGWLAAKRVLAGRKKARAVNGKQ"
     gene            1537..2661
                     /locus_tag="VGA78_13260"
     CDS             1537..2661
                     /locus_tag="VGA78_13260"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX9894891.1"
                     /translation="MTAFHPTTQTFRQGSRTMPQEYYTSPAILAEEAERLFLRQWHCV
                     GRVSRFEQPGDWVQRSIAGESIIILRDRQGEIRAFFNVCRHRGTRICREASGQFSETI
                     QCPYHAWTWTTDGKLIGAPHMQDVEGFDKRDYPLHGVPVAEWEGFVFVNLDDRPVPFT
                     QVWAPMLGRLGRFDLAGLKVGHGVRYDVQANWKLVFQNYSECLHCPMIHPQLNPVLPY
                     QSGANDLVEGPFLGGYMELTAGNDSATMTGRACGLPVSAKLAGEDLRRAYYYTLMPNM
                     LLSLHPDYVNYYIVSPVSVNHTVVESEWMFNPESQASERFNPEDAIKFWDLTNRQDWD
                     IVERSQLGIGSRKYQPGPYSTRESIPAAWDREYLRMMGRE"
     gene            2717..3133
                     /locus_tag="VGA78_13265"
     CDS             2717..3133
                     /locus_tag="VGA78_13265"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9894892.1"
                     /translation="MAAKPRPVRRKPESLRLREIGPGLTVNDLQQSIRFYTEGLGFTL
                     DEQWEVEGEVRGVRLKAGKCELNLSQDDFAKGKNRPKGTGFRLWLTTVQDLDHLAERA
                     RAFGIKLDHDPQAMPWGPRAFAVTDPDGFQISIANP"
BASE COUNT          548 a         1075 c         1087 g          579 t
ORIGIN      
        1 gctgaccctg gacttcggtt ggctgccacc ggccgtcgcg agcggcatcg gtctcgacac
       61 gcgggggagc tttgcgtcgt ccgagatcgc gagcgcggtg acgctggggg acggccagtg
      121 gttgaccctc ccgcgcgacg ccgcccgggc cgcccaggcc atccggccct tctcggcccg
      181 ggacgcggat cgctggcccg gcttcaccac ccggctggcc cggatcgccg ggttcctcga
      241 agcgctgtat cagctccccg ctcccgacct cgatacgacc tcggtgcacg agatcctgcc
      301 cctgctcggt gtggccggca agctgcgccg gctgggccgg gacgacatga tcgagctgct
      361 ccggatcctc ccgatggcga tccaggagct ggtggacgac accttcgaga gcgagccgct
      421 caaggccgcc atcgcggcgg cgggcattca ggacatccgt cagggcccac gctccggcgg
      481 taccaccttc gtgctgctgc atcacctggt gggtgccgac gccggttcca tccggggccg
      541 gcccgcgtgg accaagggtc ccaacgcgct ggccaatgcc atcgaggatg ccgcccgggg
      601 ggcgaaggtc accatccgcg cggtcaccga cgtggcccgg atcacggtcg tcgacgagcg
      661 ggtcaccgga attgtcttgg gctcgggcga ggagatcagc gccccggtag tgctatccac
      721 gctcgacccg gcacggacgc tgctcggctt ggtggacccg gtctggctcg acccggagtt
      781 cctgcaggca gtcaagaaca tcaagtttcg cggctgccgc gccaccgcgc tgtttgctct
      841 tgatggcctg ccggagcaag cctggggcga cggcgtggtc tcgctcacgc cggataccct
      901 gacgctggag cgtgcctacg atgcggccaa gtacgggcag gtgtcggaac gaccccacgt
      961 ggagttcgcg gtgcccacgc tccggtggcc cgacctggcg cctcacggca aacatgtcgt
     1021 tgtggctcac gtgcagtacg tgccctacca gcaggcagtg aataatgaac agtcaacggc
     1081 agcccgggac gacctggccg ataccgttac ccgcctgatc gacgaggcgg taccggggtt
     1141 cgcggctcgg gtccggcatc gggtctgcaa cacgccgaac gatctcgagc accgcttcgg
     1201 gatcaccgaa ggcgcggtca cccacggtga gctgaccctc gatcagattc ttttcatgcg
     1261 cccggtgccg ggatggggcc ggcacgagat gcccattgcc gggttgtacc tgggtggagt
     1321 ggggactcac ccgggacccg gagtcctggg cgggcccggc tggctggccg cgaaacgggt
     1381 gttggctggg cgtaagaaag cgcgcgcggt gaacgggaaa cagtgaatgc cggtcggtcc
     1441 gtcggtccgt cccggtagga gtgttacggc tgttcaccgt tcactgttca ccgttcactg
     1501 ttcaccgttc actgtttact gtttactgtt gtagtcatga ctgcctttca ccccactacc
     1561 cagacgttcc gccagggctc ccgcactatg ccgcaggagt actacacctc gccggccatc
     1621 ctggccgagg aggcggagcg gctgttcctg agacaatggc actgtgtggg ccgggtatcc
     1681 cgtttcgagc agccgggcga ttgggttcag cggtccatcg ccggcgaatc gatcatcatc
     1741 ctgcgcgatc gacagggtga gatccgggcc ttcttcaacg tctgccggca ccgcggcacc
     1801 cggatctgcc gggaagcctc gggccagttc tccgagacca tccagtgtcc ctatcacgcc
     1861 tggacctgga ccaccgacgg aaagctgatc ggcgctccgc acatgcagga cgtcgaggga
     1921 ttcgacaagc gggactaccc cctccacggc gtgccggtcg ccgaatggga agggttcgtc
     1981 ttcgtcaatc tggacgaccg gccggtcccg ttcacccagg tatgggcccc gatgctgggt
     2041 cgcctggggc ggttcgatct cgcagggctc aaggtgggtc acggcgtcag gtacgacgtg
     2101 caggccaact ggaaactggt gtttcagaat tactccgagt gccttcactg ccccatgatc
     2161 catccgcagc tgaacccggt gctgccctac cagagcggtg ctaatgatct ggtggaggga
     2221 ccgttcctgg gcggctacat ggagctgacg gcggggaacg acagcgccac catgaccggg
     2281 agagcctgtg gtctgccggt cagtgccaag ctggcgggcg aggacctgcg gcgggcctac
     2341 tactacaccc tcatgcccaa catgctcttg agcctgcatc cggattatgt caactattac
     2401 atcgtgtcgc cggtctcggt gaaccacacg gtggtcgaat cggagtggat gttcaatccc
     2461 gagagtcagg cgagcgagcg cttcaacccc gaggacgcga tcaagttctg ggacctgacc
     2521 aaccggcagg actgggacat cgtggagcgg agccagctgg ggatcgggtc gcggaagtat
     2581 caacccgggc cctattcgac cagggagagc attccagcgg cgtgggaccg ggagtacctg
     2641 cggatgatgg ggcgagaata gtcggcactc agccacggct gggtcagcat caaataactc
     2701 agagtcgagg tattccatgg ccgccaagcc ccgtccggtc cgccgcaaac ccgagtcgct
     2761 ccggcttcgt gagatcggtc ccggcctcac cgtgaacgat ctgcagcaaa gcattcgctt
     2821 ttacaccgaa ggcctgggct tcactctgga cgaacagtgg gaagtcgagg gtgaggtccg
     2881 aggcgtccgg ttgaaggcgg gaaagtgcga gctcaatctg agccaggatg acttcgccaa
     2941 aggcaagaat cgcccgaagg gcaccgggtt tcgcctctgg ctgaccacgg ttcaggatct
     3001 cgaccatctg gccgagcggg cccgggcgtt cggcatcaag ctcgatcacg atccccaggc
     3061 catgccctgg ggccctcgtg cctttgccgt aaccgacccg gacgggtttc agatcagtat
     3121 cgccaatccc tgacggcggg gagccgggag aagggagccg gtagggggtc gcccgcctct
     3181 cgtctcccct ctcccgcggt tccgttcacg ctgcagctgc gcggtccgcc gcctctcgta
     3241 tcagttccac ttccagggcg attttcacct ccggcccgac caggacgcc
//
LOCUS       DASWKS010000469         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3554503, whole genome shotgun sequence.
ACCESSION   DASWKS010000469 DASWKS010000000
VERSION     DASWKS010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3554503"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VGA78_13270"
     CDS             <1..434
                     /locus_tag="VGA78_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX9894893.1"
                     /translation="PLKEAMEVSGPVDVTLYVASDVKDTDFTVKLLDVYPDGRAFNLD
                     ETIQRVRWREGYDKPPVMMEKGKIYQVTFQPMTTSNYFEAGHRIRIEVSSSNFPRFDR
                     NLNTGGKNYDETESVVAHNVVHHSARYPSSLTVTVVKRPVP"
     gene            471..>1511
                     /locus_tag="VGA78_13275"
     CDS             471..>1511
                     /locus_tag="VGA78_13275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894894.1"
                     /translation="MRTGLLVLISLLAMDVEPVRSQANAPAPADLVERALQAMGGEAA
                     VRGLRNKTIEFNSASFGLGQEETPLSPPRATLSFGRIVSDFAGRRQLTTQEVRAINGT
                     VNRQRRIITAGMGMTDNNGNLSLDQPAALAAVLRGMGLQPERFLLTAMDNVAALSALR
                     PGTFRGETLDGLRYAIGSDTMNLWFDRPTGRVVVSEILSDDGVLGDRRTLTWYTRWQD
                     AGGVMLPRQFDTEVNGRILSNNVVTSATINQGLDDTLFAIPDSLAARAPRGPATPPVV
                     TVNLVQLGPGVWRAEGGTHHSLVVEQGQNLLVVEGPQSSARSKAVLDTLRSRLGGRTV
                     SAVVATHHHHDHS"
BASE COUNT          265 a          507 c          490 g          249 t
ORIGIN      
        1 agccgctcaa ggaagcgatg gaggtgagcg gaccggtcga cgtcaccctg tacgtcgcgt
       61 ccgacgtcaa ggacaccgat ttcacggtaa agcttctgga tgtgtacccc gacggccggg
      121 ccttcaacct cgatgagacg atccagcggg tgcgctggcg ggagggctac gacaagccgc
      181 cggtcatgat ggagaagggc aagatctacc aggtcacctt ccagccaatg actaccagca
      241 attacttcga agccgggcac cggatccgga tcgaagtgtc ctcgagcaac ttcccccgtt
      301 tcgaccggaa cctcaatacc ggcgggaaaa actacgacga gaccgagagt gtcgtggccc
      361 acaacgtggt gcaccactcg gcccgctatc cctcgtcgct taccgtgacg gtcgtgaaac
      421 gaccggttcc ctgatccttt gggctcaagg tcatgccaac ggagtggtcc atgcgcactg
      481 gtctactggt tctcatttcc ctcttggcga tggatgtcga acccgttcgg tcgcaggcga
      541 atgccccggc acccgcggat ctggtcgagc gggccctcca ggccatgggg ggcgaggccg
      601 cggtccgcgg acttcgcaac aagaccatcg agttcaacag cgcctcgttc gggctcgggc
      661 aggaggagac gccgctctcg ccgccccggg ccaccctctc cttcggccgg atcgtttccg
      721 atttcgcggg ccggcggcag ctgacgaccc aggaagtccg ggccatcaac ggcacggtga
      781 accggcagcg gcggatcatc acggccggga tggggatgac cgacaacaac ggcaacctgt
      841 ccctggacca gccggccgcc ctggcggccg tgctgcgcgg aatggggttg cagccggagc
      901 gctttctgct gaccgccatg gacaacgttg cggccctctc ggcccttcgc ccgggcacgt
      961 tccgtggcga gacgctggac ggtctgcgct atgcgatcgg ctccgacacc atgaatctct
     1021 ggttcgaccg gcccaccggc cgggtggtgg tgagcgagat cctgtccgat gacggcgtgc
     1081 tgggcgaccg ccggaccctg acctggtaca cccgctggca ggacgccggc ggcgtgatgc
     1141 tcccgcgtca gttcgatacc gaagtgaacg gccggatcct ctcgaacaac gtggtcacct
     1201 cggccacaat caaccaggga ctggacgaca ctctgttcgc catcccggat tccctggcgg
     1261 cccgggcgcc tcgcggcccg gccacgccgc ccgtggtgac ggtgaacctg gttcagctgg
     1321 gacccggggt ctggcgggcg gaaggcggta cccatcactc gctcgtggta gaacaggggc
     1381 agaacctgct ggtggtcgaa ggcccgcaga gctccgcccg atccaaggcg gtcctcgaca
     1441 ccctgcgaag ccggctgggt ggccgaacgg tctcggcggt cgtagccact catcaccacc
     1501 atgaccattc g
//
LOCUS       DASWKS010000470         4863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3217755, whole genome shotgun sequence.
ACCESSION   DASWKS010000470 DASWKS010000000
VERSION     DASWKS010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4863
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3217755"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..1417)
                     /gene="rseP"
                     /locus_tag="VGA78_13280"
     CDS             complement(41..1417)
                     /gene="rseP"
                     /locus_tag="VGA78_13280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEX9894895.1"
                     /translation="MTDLLLKILSLVLVLGVLVFVHELGHFLAAKWAGIRVFRFSLGM
                     GAPIKRLTFTRGHTEYAVSWLPLGGYVKMASKEEMAGDALEGRAPNLADVPLEETFEA
                     QPVWKRIIVILAGVTMNMLFAWLVFSSLFLKNGREVSAVTTVGRVIDTLLQGEARGFA
                     ALRPGDRISAIDGRPVNSWEEIVEAIQHGTADSMVVEIAGKPPIVMPLHRDDLSQRLT
                     ASVALLPSLPPIVGRMLPDRPAARAGLQSGDTVLAVNGQPVGQWYDMTGMLETRGGQE
                     TSFLIGRSTGRLEVRITPDSDVQRLPGGGERTIGRIGVYPRPYQIRSEPLSLGQAMAE
                     GWGATVGSLSFIVRTVRGMVTGRVSTREVGGPIAIAQAAGESVRAGLDQFLSFMALIS
                     VNLAVVNMLPIPVLDGGQFLFLLGEAVLRRPLPLRLRQRLTAVGLFLILVLMVLAFSN
                     DIRRIFAI"
     gene            complement(1414..2541)
                     /gene="dxr"
                     /locus_tag="VGA78_13285"
     CDS             complement(1414..2541)
                     /gene="dxr"
                     /locus_tag="VGA78_13285"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: protein motif:HMM:TIGR00243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEX9894896.1"
                     /translation="MSGVAVLGSTGSIGQSTLEVLRRQRDRFRIVALTAGSNAELLAA
                     QVAEFQPVFAGLADGPAGGRAGGDFDWGPDCLIHAATRPDVDIVVNAVVGFAGLDATL
                     AALRAGKRVALANKESLVTAGALVMEAARTGGGQLIPVDSEHSAVLQCIAAGRSDPVR
                     LVLTASGGPFRTWDGPRMARASVDEALNHPTWRMGHKITVDSATLVNKALEVIEGHFL
                     FGLPYDALEVVVHPQSVVHAFVEFADRSVLAQVGFPSMELPILYALTFPERLPDQGVR
                     RFDPVAAGALTFEPLRTDAFRAFALGVAMGRRGGSAPAAFNAANEVAVAAFLEGRIQF
                     GRIAEVIEAVCAAHDPVPVSSVEIVRDVDAWSRARAREFLG"
     gene            complement(2541..3407)
                     /locus_tag="VGA78_13290"
     CDS             complement(2541..3407)
                     /locus_tag="VGA78_13290"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEX9894897.1"
                     /translation="MASNLTQRILFALIALPIALVLVWYGGAPLALLVAIAGVLGTRE
                     LIGFARRQGMRPLAPAMLATAAGLPALAWAANVGSGARELVDLWWPYAGAAWLILVLV
                     ATLARVAPNQRPLGSAAVTIFAPLYAAGLPAFLLTVRHSQHGGRSLPGAALVLFPLVT
                     VWICDTVAMIVGRRLGGPKLAPTVSPGKTWSGTIGGFIGALAVGPVYRAAVFVPLGLN
                     VSPWQALVMAAVIGSLGQVGDLAESLLKREVGLKDSSRLIPGHGGVLDRLDSLYFAIP
                     LGAGLYRLFGVI"
     gene            complement(3431..4192)
                     /gene="uppS"
                     /locus_tag="VGA78_13295"
     CDS             complement(3431..4192)
                     /gene="uppS"
                     /locus_tag="VGA78_13295"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HEX9894898.1"
                     /translation="MSEPFDDLLTPIRQDGRIPSHIAVIMDGNGRWAQARALPRPAGH
                     QAGMAAVREIVEGGLQAGVRVLTLFAFSQENWQRPQAEINALMRLLEEYIARESAQLA
                     GQGVAVSILGELDRLSPGARRAVDRLMGSTAGGRNLALNLCISYGARSELARAARLLA
                     EEVARGERRPDQIDEPAMAERLYTAPWPDPDLLIRTSGEFRLSNFLLWQVAYAEFYVT
                     PVLWPDFTRHHLYEAIRDYQRRERRFGRVMVNGDR"
     gene            complement(4189..4758)
                     /gene="frr"
                     /locus_tag="VGA78_13300"
     CDS             complement(4189..4758)
                     /gene="frr"
                     /locus_tag="VGA78_13300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX9894899.1"
                     /translation="MSQSQKDTIPSVTKHTREAMQKAVESLKKELTGIRSGKASTSLL
                     DLVRVEAYGSPLPLNQVAMVAAPEPRLLTVQPFDKSLAGVIEKAIRDADLGLNPASQG
                     GLIRVPLPPLTEERRKELVRLVHKLGEEGRVAVRHQRTEAMHRLKKMEHVSEDDTRHA
                     EKDVQKITDDHIHQIDQILKTKEAEIMEV"
BASE COUNT          848 a         1736 c         1569 g          710 t
ORIGIN      
        1 acgacctccc cggggctggc aaggcatcac cgggtaccgc ttagatcgcg aagatccgac
       61 ggatatcgtt ggaaaaggcg aggaccatca gcaccagaat caggaacagg ccgacggccg
      121 tcagccgctg cctgagcctc aggggaagcg gccggcgcag cacggcttcc cccagcagga
      181 agaggaactg ccccccgtcc agcaccggga tcggcagcat gttcaccacc gccaggttga
      241 cggaaatgag cgccatgaag ctgaggaact ggtccagccc ggcccggacc gattcgccgg
      301 cggcctgggc gatggcgatg gggccgccca cctcccgggt ggacacccga ccggtgacca
      361 tcccgcgtac ggtacgcacg atgaaggaga gcgatccgac ggtcgcaccc cacccctcgg
      421 ccatggcctg tcccagggaa agcggctcgg atcggatctg atagggccgg ggatagaccc
      481 cgatccgtcc gatggtccgc tccccgccgc ccgggaggcg ctgcacgtcg ctgtcgggcg
      541 tgatgcgcac ctccaaccgg ccggtactcc gcccgatcag aaacgaggtc tcctggccgc
      601 cccgggtctc caacatcccg gtcatgtcgt accattggcc caccggctgc ccgttgacgg
      661 ccagcaccgt atcgcctgac tggagaccgg ctcgagccgc cgggcgatcg ggaagcatcc
      721 ggccgacgat gggagggaga ctcggcagca gcgcgacgga ggcggtgagc cgctggctca
      781 aatcgtcccg atggagcggc atcacgatgg gcggcttgcc ggcgatctcg accaccatcg
      841 agtctgcggt gccgtgctgg atggcctcga cgatctcctc ccagctgttc accggccgcc
      901 cgtcgatcgc gctgatccgg tcgccggggc gcagggccgc aaagccccgg gcttcgccct
      961 gcagcagggt atcgatcacc cggccgaccg tcgtcaccgc gctgacttcg cggccgttct
     1021 tcaggaacag gctcgagaac accagccagg cgaacagcat gttcatggtg accccggcca
     1081 ggatcacgat gatccgtttc cagaccggct gggcttcgaa ggtctcttcc agtgggacat
     1141 cggccagatt gggcgctctt ccttccagcg cgtcacccgc catctcttcc ttgctggcca
     1201 tcttcacata gccaccgagg ggcagccagg agacggcgta ctcggtatga ccccgggtga
     1261 acgtcagccg cttgatcggg gcacccatcc ccagcgaaaa gcggaacacc cggatcccgg
     1321 cccacttggc ggccaggaag tgacccagct cgtgcacgaa cacgagcacg ccgagcacga
     1381 ggacgagcga gaggattttg agcaggaggt cagtcacccg agaaactccc tggcgcgggc
     1441 ccgggaccac gcatcgacat cacggacgat ttcgaccgag ctgacgggca ccgggtcgtg
     1501 cgcggcacag acggcttcga tcacttcggc aatgcgcccg aactggattc gtccctccag
     1561 aaaggcggcc accgccactt cgttagcggc gttgaatgcc gcgggggcgc tcccgccccg
     1621 ccggcccatc gcgacaccca gcgcaaaggc ccggaacgca tcggtccgga gcggctcgaa
     1681 ggtgagcgcg ccggccgcca ccgggtcgaa ccgccgtact ccctggtcgg gcagccgctc
     1741 cgggaaggta agcgcgtaga ggatgggaag ttccatggag ggaaacccca cctgggccag
     1801 cacgctgcgg tcggcaaatt ctacgaacgc gtggaccacg ctctgaggat gcaccaccac
     1861 ctcgagcgca tcgtaaggca ggccgaacag gaaatgcccc tcgatcactt ccagcgcctt
     1921 gttcaccagc gtggcgctgt ccaccgtgat cttatggccc atccgccagg tgggatggtt
     1981 cagcgcctcg tccaccgagg cccgcgccat ccgggggcca tcccaggtgc ggaacggccc
     2041 gcccgatgcg gtcagcacca gccgcaccgg gtcgctcctg cccgcggcaa tgcactggag
     2101 gaccgcgctg tgttccgaat ccaccgggat cagctgaccg ccaccggtcc gcgccgcctc
     2161 catcaccagt gccccggcgg tcaccagcga ttccttgttg gccaacgcga cccgcttccc
     2221 ggcccggagc gccgccaagg tcgcgtccaa tccggcaaac cccacgacgg cattgaccac
     2281 gatgtccacg tcgggacggg tcgccgcgtg gatcagacag tcggggcccc agtcaaagtc
     2341 cccgcccgcc cgcccgcctg ccggcccgtc cgccagtccg gcaaagaccg gttggaactc
     2401 cgcgacttgg gccgccagca gctcggcatt ggagcccgcg gtgagcgcca cgatccggaa
     2461 ccgatcccgc tggcgccgaa gcacctccag cgtcgactgg ccgatcgacc cggtcgaacc
     2521 caggaccgct acaccggaca tcagatgacg ccgaacagac ggtagaggcc ggccccgagc
     2581 gggatggcga agtagaggga atcgaggcga tccagcaccc ccccgtgacc cgggatcaac
     2641 cggctcgaat ccttgagacc cacttcgcgt ttgagcaacg actcggccag atcaccgacc
     2701 tgccccaggg atccgatgac cgctgccatc accagcgcct gccagggcga gacgttcagg
     2761 ccgagcggga cgaacacggc ggcgcgatag accggcccaa ccgcgagtgc cccgatgaac
     2821 ccgccgatgg tccccgacca ggtcttcccc ggactcaccg tgggcgccag cttgggccca
     2881 cccaaccgcc gacccacgat catcgccacc gtatcgcaga tccagaccgt caccagggga
     2941 aagagcacca gcgccgcgcc gggaagggac cggccgccgt gctgcgagtg acgcacggta
     3001 aggaggaatg cgggtagtcc ggcggcgtag agcggcgcga agatcgtcac ggccgctgag
     3061 cccagcggcc gctggttcgg cgccacgcgg gccagggtcg ccaccagcac cagaatgagc
     3121 caggccgccc cggcataggg ccaccacagg tcgaccagct cgcgagcgcc ggacccgacg
     3181 ttggcggccc acgccagcgc gggcagcccg gcggcggtgg ccagcatggc cggcgccaac
     3241 ggcctcatcc cctggcgccg cgcgaagccg atcagctcgc gggtccccag cactcccgcg
     3301 atcgccacca gcaacgcgag cggggccccg ccataccaca ccagcaccag cgcgatggga
     3361 agcgcgatga gggcgaagag aatccgctga gtgaggttgc tggccatgtc gggaaggcgg
     3421 tcggctcgcg tcagcgatcg ccgttgacca tcacccggcc gaatctccgc tcccggcgct
     3481 ggtagtcgcg aatggcctca tagagatgat gccgagtgaa gtccggccac agcaccggcg
     3541 tcacgtagaa ttccgcgtag gctacctgcc acagcaggaa attggaaagc cggaactcgc
     3601 ccgaggtccg gatcaggaga tcgggatcgg gccagggggc ggtgtagagt cgttccgcca
     3661 tggccggttc gtcgatctgg tccggtcggc gctcgccccg ggcgacttcc tccgccaata
     3721 aacgcgcggc ccgcgccagc tcggagcggg ccccgtagga gatgcacagg ttgagcgcca
     3781 ggttgcggcc tccagccgtc gaccccatca gccggtccac tgctcgccga gccccggggc
     3841 tcaatcggtc cagctccccc aggatggaga ccgcgacgcc ctgaccggcc agctgggccg
     3901 actcgcgcgc gatgtattcc tccagcagcc gcatcagcgc attgatctcg gcctggggcc
     3961 gttgccagtt ctcctggctg aaggcgaaca gggtgaggac ccgcacaccg gcctgcaggc
     4021 ccccctcgac gatttcgcgt accgccgcca tcccggcctg gtgaccggcc ggtcggggca
     4081 aggcccgggc ctgggcccac cgaccgttgc catccatgat gacggcaatg tggctgggga
     4141 tccgtccgtc ctgccggatc ggggtgagca aatcgtcgaa gggctcgctc acacttccat
     4201 gatctcggct tctttggtct tgaggatctg atcgatctgg tggatatgat cgtcggtgat
     4261 tttctgcacg tccttttcgg catgacgggt gtcatcctcg ctgacgtgct ccatcttctt
     4321 gagccggtgc atcgcctcgg ttcgctgatg tcgcaccgcc actcgcccct cctcgcccag
     4381 cttgtgcacc agccgaacca gctccttgcg gcgctcttcg gtcagcggcg gcagcggcac
     4441 ccggatcaat ccgccctgcg aagcgggatt gagtcccagg tcggcgtccc ggatggcttt
     4501 ttcgatgaca cccgcgagcg acttgtcgaa cggctgcacc gtgaggagcc gcggctccgg
     4561 cgccgcgacc atggctacct ggttgagcgg caggggcgac ccgtaggcct ccacccgcac
     4621 cagatccagc agcgaggtgg aagccttgcc gctccggatg ccggtcagtt ccttcttcag
     4681 gctctccacc gccttctgca tggcttcgcg ggtatgcttg gtgacgctcg ggatggtgtc
     4741 cttctggctc tggctcatcg gacgatggtc cctacccgct cgccttccag cacgcgcagg
     4801 acggcgccgg gtcgctggat gttgaacacc acgatgggaa ggccattggc cttgcagagg
     4861 ccg
//
LOCUS       DASWKS010000471         7184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2113403, whole genome shotgun sequence.
ACCESSION   DASWKS010000471 DASWKS010000000
VERSION     DASWKS010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7184
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2113403"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..2130)
                     /locus_tag="VGA78_13305"
     CDS             complement(76..2130)
                     /locus_tag="VGA78_13305"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX9894900.1"
                     /translation="MKVYDTRAIRNVAFVGHSGSGKTTLVDALAFVAGSSRRHGSIAD
                     GTTLTDYTPDEIERKHSIGLGLAHAEWMDAKLNLIDAPGYLDFLGETTTALHAADAAV
                     VVVSAVGGVEVGTEKAWEIGDHLHLPRILFVSQMDKERANFDRVFDDIKSHLSTKVVP
                     VEVPIGNGPDFHGIINLLTGTTQVYRKGTKTGEYDEVPLPEEYKEQYAKYDQALVEAI
                     AATDDALLERYLGGEEIGRADIVAVLKKGLVAGEIVPMLCGSPTLTYGMRALLTDLVE
                     LLPSPAEIAPVGADGGLVARVFKTVSEPHVGDVTFFRLYRGGVRNGQDVWNAEHHTIE
                     KLNHLTVQQGKERMEVAELREGDIGTVAKLKNTHTNDTFSMASQPVQLPPIPFPEAVA
                     TSAVMVKQRGEEDKLAAGLHKIHEEDPTFHFEYSSELGQTLIHGLGEKHFEIILGRLQ
                     RKYGVHAELVRPKVAYRETLKGKAEGQGKHKKQTGGRGQFGDCWVRISPLPRGSGYKF
                     IDSIVGGVIPNKYIPAVDKGIQEAAVRGVIAGYPCVDFQAECYDGSYHDVDSNEMSFK
                     MAGIQAWRNVSPKCRPVLLEPLMEVTVWTPDDTLGTVMGDLSGRRGQILGSEADGRLT
                     QVRAIVPEAELYKYSTTLHSMTHGRGTYRAKFHTYAEAPPDVTAKVAEEHLKEKKEDA
                     EH"
     gene            complement(2331..3332)
                     /locus_tag="VGA78_13310"
     CDS             complement(2331..3332)
                     /locus_tag="VGA78_13310"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX9894901.1"
                     /translation="MTADLSRWREIVARYQKPSINKSVLQLINTLGPLAVLFVVMYFT
                     MRINYLLTLGLAVVAAGFLIRTFIIMHDCGHGSFFKSRRANDIVGFITGVLTLTPYMQ
                     WRRDHAIHHATSGHLDERGHGDVTTLTVKEYLQLPWWGRVRYRFYRNALVMLIIGPIF
                     LIIKHRLHTPDTAGRREIIGVHATNAAILLLFLATSLLIGPLKVAAIYLPAMLMAGAA
                     GVWLFYVQHQFEDTYWAPAGQWDYATAAVEGSSYYRLPRLLEWMTGSIGFHHVHHLSP
                     RIPNYLLRTCHEENPQFQTVRTLTMWESVKTFSLKLWDEENNRLITWKQFRRLVSSA"
     gene            complement(3456..3908)
                     /locus_tag="VGA78_13315"
     CDS             complement(3456..3908)
                     /locus_tag="VGA78_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEX9894902.1"
                     /translation="MTSVLLGTAAAAALGTAVLAQGPAQAKAEEVTVYKSPTCGCCGK
                     WIDHMKAAGFAIKVVDMDDITEIKQASGVPMKLRTCHTAVVGNYVIEGHVPADLVKKM
                     LAEKPAAAGIAVAGMPVGSPGMEVGTQKDPYEVVLFEKSGKTTVYAKR"
     gene            complement(4012..4167)
                     /locus_tag="VGA78_13320"
     CDS             complement(4012..4167)
                     /locus_tag="VGA78_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894903.1"
                     /translation="MYQLGTLKANSEVFYRATHGILKLTLFAGGYSWQCTPTSGSFSD
                     KGTGTCH"
     gene            complement(4470..4952)
                     /locus_tag="VGA78_13325"
     CDS             complement(4470..4952)
                     /locus_tag="VGA78_13325"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX9894904.1"
                     /translation="MWMVQTRRPADEVMQLQGRLQRMMSDAFSPWPFDYDTSTVGSAW
                     APAVDVFEDKEAIKLMGELPGVKPEDVKISLENSTLTLRGEKKQAAEEKTERVHRYER
                     SYGRFERVFTLPSTVDADRIEATFEDGVLTVMLPKTERARPREIPVNHKARQIKPETR
                     "
     gene            5146..6993
                     /gene="nagB"
                     /locus_tag="VGA78_13330"
     CDS             5146..6993
                     /gene="nagB"
                     /locus_tag="VGA78_13330"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004342 - glucosamine-6-phosphate
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0006046 - N-acetylglucosamine catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEX9894905.1"
                     /translation="MTERIPTEVFDDHADLARRVAGRIAAVIREKAARKQTAVIGLAT
                     GSTPVGVYRELIRLHREGGLSFANVVTFNLDEYWPIDPDNIHSYHRFMWDNLFSQVDI
                     DRSNVHIPDGSVSREHLAAHCEEYESRIRAAGGIDFQLLGVGKTGHIGFNEPGSGARS
                     RTRLVMLDAVTRRDAAADFFGESSVPREAITMGIATILEAREIAILATGEHKADIVRR
                     AVEGEIDTEVAATFLQRHPKTTFYLDQAAAADLTRFATPWLVDEVVWTDELTVRAVAW
                     LSLQVGRAILKLTLRDYAEHHMSALVAKFGSPGEVNGFVFNAMGGRIRGRSKLPRGRR
                     IICFSPHPDDDVISMGGILRKLLLNDNEIVVAYMTSGNIAVFDHDVRRYLDWLERLSR
                     ERGLAAPEVEVLRQRVSGFFARKRPGDVDLPEIQDIKRIIREAEAVSGIETLGLPAGA
                     ARFLNLPFYQTGKVRKDPIGPGDVAIVKELLEQVRPDLVFVAGDLSDPHGTHRMCKEA
                     IECALQAVPQPRPEVWLYRGAWQEWPVTQATWLVPLSQEELQLKIQAIFKHQSQKDSA
                     PFPGLDDREFWQRVETRNKETAGTLDRLGLAEYFAMEAYVVEPPVNATG"
     gene            complement(6977..>7184)
                     /locus_tag="VGA78_13335"
     CDS             complement(6977..>7184)
                     /locus_tag="VGA78_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894906.1"
                     /translation="DETSETRHTLLQGTWAPAMPGQLAIRMRDGNAAAWLANGRSILM
                     RGLLAPPDESEDLVELTLRFTRWR"
BASE COUNT         1230 a         2365 c         2241 g         1348 t
ORIGIN      
        1 acgattgacg attgacaatt gacgattgct ccccgaggca cgagctcaca atcgtcgatt
       61 gtcaatcgtc aatcgtcaat gctccgcgtc ttccttcttt tctttcaggt gctcctccgc
      121 caccttcgcc gtgacgtcgg gcggggcttc ggcgtaggtg tggaacttgg cccggtaggt
      181 cccgcgcccg tgggtcatgg agtgcagggt ggtgctgtac ttgtagagct ccgcttccgg
      241 cacgatggcg cggacctggg tgaggcggcc gtcggcctcg gagccgagga tctgtccccg
      301 acgcccggag agatcgccca tcacggtgcc cagcgtgtcg tccggggtcc agaccgtcac
      361 ctccatcaac ggctcgagca gtaccggccg gcacttgggc gacacgttcc gccacgcctg
      421 aatgccggcc atcttgaacg acatttcgtt ggagtcgacg tcgtggtagg acccgtcgta
      481 gcactcggcc tggaagtcca cgcagggata gcccgcgatg acacctcgca ccgccgcttc
      541 ctggatgccc ttgtcgaccg ccggaatgta tttattcggg atcacgccgc ccacgatcga
      601 atcgatgaac ttgtagccgc tgccccgcgg cagcggcgag atgcgcaccc agcagtcgcc
      661 gaactggccc cggccgccgg tctgcttctt gtgcttcccc tgtccttccg ctttgccctt
      721 gagggtctcc cggtacgcca ccttgggtcg caccagctcc gcatgcaccc cgtacttgcg
      781 ctggagccgg cccagaatga tctcgaagtg cttttccccg agcccgtgga tcagggtctg
      841 tcccagctcc gagctgtact cgaaatggaa ggtgggatcc tcttcatgga tcttgtggag
      901 cccggcggcc agcttgtcct cctcgccccg ctgcttcacc atcacggccg acgtcgccac
      961 cgcttcgggg aacggaatcg gcggcagctg gaccggctgg ctggccatgg aaaaggtgtc
     1021 gttggtatgg gtgttcttga gcttagccac cgtcccgatg tcaccttccc tgagctcggc
     1081 cacctccatt cgctccttcc cctgctgcac ggtgaggtgg ttgagtttct cgatggtgtg
     1141 gtgctccgcg ttccagacgt cctggccgtt gcgtaccccg ccgcggtaga ggcggaagaa
     1201 ggtcacatca cccacgtgcg gctcggagac cgtcttgaac acccgggcca ccagtccccc
     1261 atcggccccc accggggcga tttcggcggg tgacgggagc agctccacca ggtcggtgag
     1321 cagggcccgc atgccgtagg tcagcgtcgg actgccacag agcatcggga cgatctcccc
     1381 cgcgaccagc cccttcttga gcaccgcgac aatgtcggcc cgcccgatct cctcgccgcc
     1441 caggtagcgc tccagcagcg cgtcgtcggt cgcggcgatg gcttcgacca gggcctggtc
     1501 gtacttggcg tactgctcct tgtattcctc gggcaggggc acctcgtcgt actcgccggt
     1561 cttggtgccc ttgcggtaga cctgggtagt gccggtcaac aggttgatga tcccgtggaa
     1621 gtcgggcccg ttgccgatcg ggacctcgac cggcacgacc ttggtcgaca ggtgagactt
     1681 gatgtcgtcg aacacccgat cgaagttggc ccgctccttg tccatctggg aaacgaacag
     1741 aatccggggc agatgcagat gatcgccgat ctcccacgcc ttctcggtgc cgacctccac
     1801 cccgcccacc gcgctcacca ccaccaccgc ggcgtccgcc gcgtgcaggg cagtggtggt
     1861 ctcccccaga aagtcgagat agcccggggc atcgatcagg ttgagcttgg catccatcca
     1921 ctcggcgtgg gccagcccca ggccgatgga gtgcttgcgt tcgatttcgt cgggggtgta
     1981 gtcggtgaga gtggtgccgt ccgcgatgga gccgtgccgg cggctcgaac ctgcaacgaa
     2041 ggcgagggcg tcaacgagcg tggtcttgcc ggaaccgctg tggcccacga aggccacgtt
     2101 ccggatcgcc cgtgtgtcat agaccttcat aggtccaagc ctcctcgaac aggggaacct
     2161 cattctggag gccacctctt cggttgtcaa atcctacagg tcggaaaagt cggaagggtc
     2221 gtaagggtcg gaaaaaagca aggtcggaat cgaccgcttc cgacctttac gactattccg
     2281 acttttccga cttttccgac ttttccgacg ctcggcctag ccgagccggc tcaggccgag
     2341 ctgaccagcc ggcgaaactg cttccaggtg atcagccggt tgttctcctc gtcccacagc
     2401 ttgagcgaaa aggtcttgac gctctcccac atggtcaggg tgcggaccgt ctggaactgc
     2461 ggattctctt cgtggcaggt ccgcagcagg tagttcggaa tcctggggct cagatgatgc
     2521 acgtggtgga agccgatgct gcccgtcatc cactcgagca ggcgcggcag ccggtaatag
     2581 gagctgcctt cgaccgcggc ggtcgcatag tcccactggc cggccggagc ccagtaggtg
     2641 tcctcgaact gatgctgcac atagaagagc catactccgg cggccccggc catgagcatc
     2701 gccggcaggt agatcgccgc gaccttgagc ggcccgatca gcagcgacgt ggccaggaac
     2761 agcagcagga tggccgcgtt ggtggcgtgc acaccgatga tctcacgccg gcccgccgtg
     2821 tccggggtat gcagccggtg cttgatgatc aggaaaatcg gcccgatgat gagcatcacc
     2881 agcgcgttgc ggtagaaccg gtatctgacc cgcccccacc atggcaattg caggtattcc
     2941 ttgacggtga gcgtggtgac gtcgccatga ccccgttcat ccaggtggcc cgatgtagcg
     3001 tggtgaatcg cgtgatcgcg ccgccactgc atatacggcg tgagcgtcag aaccccggtg
     3061 atgaagccca cgatgtcatt ggcacggcgg gacttgaaga acgagccgtg tccgcaatcg
     3121 tgcatgatga tgaaggtccg gatcagaaaa cccgccgcca ccaccgccag tccgagggtg
     3181 agcaggtaat tgatccgcat ggtgaagtac atcaccacga acagcaccgc cagcgggccg
     3241 agcgtgttga tcagctggag aacgcttttg ttgatgctgg gcttctggta tcgggcaacg
     3301 atttcgcgcc aacgagagag gtctgctgtc atgtgagtaa tctaccatcc ggcaagggcc
     3361 ttagtgtaac gttcgatgta acaacagctt gagtcaggca atcgcgaccg ccaaccagcc
     3421 ggtgcagggt ggtgagccgc aggaaacgcg cccagtcagc gtttggcgta gaccgtggtc
     3481 tttccactct tttcgaatag aacgacctcg tacgggtcct tctgagtccc cacctccatc
     3541 cccggcgagc cgaccggcat ccccgcaact gcgatcccgg ccgcggcggg tttctcggcc
     3601 agcatcttct tcaccagatc ggccgggaca tgtccctcga tcacgtagtt cccgaccacc
     3661 gcggtgtggc aggtgcggag cttcatcggg acgccactgg cctgtttgat ctcggtgatg
     3721 tcgtccatat cgaccacctt gatcgcgaag cccgcggcct tcatatggtc gatccacttc
     3781 ccacagcagc cgcaggtggg cgacttgtag accgtcactt cctcggcctt cgcctgggcc
     3841 ggcccctgag ccagaacggc cgtaccgaga gccgccgccg ccgccgtccc cagaagtact
     3901 gacgtcaaac gagacatcct tggactcctc ccaggcgttc gactccgcct gccgatgttg
     3961 ttcccctgat cctgcctgcc tgaaagatac gaccggctcc aagttctgac ctcaatggca
     4021 ggtaccggtc cccttgtcgc tgaagctgcc gctggtgggg gtgcactgcc agctgtatcc
     4081 gccggcgaag agggtgagtt tgagtatgcc gtgggtggcg cggtagaaca cttcgctgtt
     4141 ggccttgagg gtaccgagct ggtacaagcc ccgaccgccc gtgccgcgaa ttgccgaatc
     4201 ccccgggcgg gatccgcgct cccgttagga gacggacacg gctcctggtc tcccgacgga
     4261 cagtcgatcg tttttacctc ggcgcgcaac cgcaaccacg acgtctatcc gatggacccc
     4321 gaccgcagcg ggcgttcgcc cgttgacccg acgggcagcg gatcctgttc tccgccaccg
     4381 cgtcggggaa aaacgaagtc tacgtcgtta acgcctacgg ttccagcctg cgccgccaga
     4441 cgaccggaac cgaaggcacc cgctagccgt taccgggtct ccggcttgat ctgccgggcc
     4501 ttgtggttga ctgggatttc ccgcggccgc gcccgttcgg tcttgggcag catcaccgtc
     4561 aggaccccgt cctcgaacgt cgcctcgatc cgatcggcat ccaccgtgct gggcagggtg
     4621 aacacccgtt cgaaacggcc gtagctccgc tcatagcggt gaacccgctc ggtcttctcc
     4681 tcggccgcct gcttcttctc gcctcggagc gtgagcgtgc tgttctcgag cgagatcttc
     4741 acatcctccg gtttcacgcc cggcaactca cccatcagct tgatcgcctc cttgtcctcg
     4801 aagacatcca ccgccggggc ccaggccgac ccgacggtac tggtgtcgta gtcgaaaggc
     4861 caggggctga aggcatcgct catcatgcgc tgaagccggc cctgcagctg catcacttcg
     4921 tcagcggggc ggcgagtctg aaccatccac atatgaccga cctcccttga ggggttagga
     4981 ttgaatgctg gcacaggggc cagctggcac ggcttagcga aatgcattca ccgtgccctt
     5041 ttcactggcc agactggcag ctgaagtgtc tgggtgacaa acaccctctg tcacttcgac
     5101 aagccccctt cgaccccttc gacccccttc gacctccttc gacctatgac cgagcgcatc
     5161 cccaccgagg tgtttgacga ccatgccgac ctggcacgcc gggtggcggg tcgcattgcg
     5221 gcggtcatcc gggaaaaggc ggcgcgaaag caaacagcgg tcatcggcct ggcgaccgga
     5281 tcaaccccgg tcggggtcta tcgcgagctg atccggctgc accgggaggg agggctgtcc
     5341 ttcgcgaacg tggtgacgtt caatctcgat gagtactggc ccattgaccc ggacaacatt
     5401 cactcctatc accggttcat gtgggacaat ctgttctccc aggttgacat cgaccggtcc
     5461 aatgtgcaca tccctgacgg ctcggtctcc cgggagcacc tcgcggccca ttgcgaggaa
     5521 tacgagtccc ggatccgggc ggccggcggg atcgactttc agctgctggg tgtcggcaag
     5581 accggccaca tcggcttcaa cgaacccggt tccggcgcca ggagccgtac ccggctggtc
     5641 atgctggatg ccgtgacccg gcgcgacgcc gcggccgatt tcttcggtga gtccagcgtg
     5701 ccgcgcgagg caatcaccat gggcatcgcc accatcctgg aggctcgcga aatcgccatc
     5761 ctggccaccg gcgagcacaa ggccgatatc gtcaggcggg cggtcgaggg agagatcgat
     5821 accgaagtcg ccgccacctt tctgcagcgg caccccaaga ccacgttcta tctggaccag
     5881 gccgccgccg ccgacctcac ccgcttcgcg acgccgtggc tggtggatga agtggtgtgg
     5941 accgatgagc tgacggtgcg ggccgtggcc tggctgtcgt tacaggtcgg ccgggccatc
     6001 ctcaagctca cattgcggga ctacgccgag caccacatgt cggcgctggt ggcgaagttc
     6061 ggctcaccgg gggaggtcaa cggtttcgtc ttcaacgcga tgggcggccg gatccggggc
     6121 cgctccaagc tgccccgggg gcgccggatc atctgcttct cgccccaccc cgacgacgac
     6181 gtgatctcga tgggcggcat tctccgcaag ctgctgctca acgacaacga gatcgtggtc
     6241 gcgtacatga ccagcggcaa catcgcggtc ttcgatcatg acgtgcgccg ctatctcgac
     6301 tggctggaac ggttgtcgcg ggagcgcggg ctggccgccc ctgaagtcga agtgttgcgc
     6361 cagcgggtga gcggcttctt cgcccggaaa cggccgggag acgtggacct gcctgagatc
     6421 caggacatca agcggataat ccgtgaggcg gaggccgtga gcggcatcga aacgctggga
     6481 ttgccggccg gggcggcgcg gtttctcaac ctgccgttct atcagaccgg caaggtgcgc
     6541 aaggacccca tcgggccggg cgacgtcgcg atcgtgaagg agctgctgga gcaggtgcgg
     6601 cccgatctgg tcttcgtggc cggcgatctc tccgatcccc acgggaccca ccggatgtgc
     6661 aaggaagcga tcgagtgcgc cctgcaggcc gtgccccaac ctagaccgga ggtgtggctc
     6721 taccggggcg cgtggcagga gtggccggtg acccaggcga cctggctggt ccccctgtcg
     6781 caggaagagc tgcagctcaa gatccaggcg atcttcaagc accagtccca gaaggactcg
     6841 gctccctttc ccgggctcga cgaccgcgaa ttctggcagc gcgtcgaaac ccggaacaag
     6901 gagaccgcag gaacgctcga ccggttgggc ctggccgagt acttcgcgat ggaggcctac
     6961 gtagtggagc caccggtcaa cgccaccggg taaaccgcag cgtcagctcc accaggtctt
     7021 cgctctcatc cggcggggcc agcaggcccc gcatgaggat cgagcggcca ttggccaacc
     7081 atgcggcggc gtttccgtcg cgcatgcgga tcgccagctg acccggcatc gccggagccc
     7141 aggtgccctg cagcagggta tggcgggttt cgctggtctc atcc
//
LOCUS       DASWKS010000472        17453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2844612, whole genome shotgun sequence.
ACCESSION   DASWKS010000472 DASWKS010000000
VERSION     DASWKS010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844612"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VGA78_13340"
     CDS             <1..198
                     /locus_tag="VGA78_13340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894907.1"
                     /translation="KHPTIELKGRGSGYRDARSPAQTAGLLQQIEPASAGWIRTPFGG
                     RPRGSPEECQRQSAGGCVNAG"
     gene            complement(252..1091)
                     /gene="istB"
                     /locus_tag="VGA78_13345"
     CDS             complement(252..1091)
                     /gene="istB"
                     /locus_tag="VGA78_13345"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX9894908.1"
                     /translation="MSPSPLSPRERLRAQLADLKMPGALEALDDILRQVDGGHLPTPA
                     AIEALLGAQISLRNTRRLVAAMRSSRLPAIKTLADFDFSFQPSLKREQIDNLHTLGFL
                     ERHENVVLLGPPGVGKTHLAISLAIAAAQSGRRVYYGTLADLITSLEEAQQAGRLTQR
                     LKTLIFPSLLVVDEIGYLPISRTGAMLFFQLMSRRYETGATILTSNKSFDEWGEVFGD
                     EVMAGALIDRLVHHCHIVNIRGNSYRMRHHAELYGIRHRRGQAPEPPPRKRRARAREA
                     ATT"
     gene            complement(1088..2104)
                     /gene="istA"
                     /locus_tag="VGA78_13350"
     CDS             complement(1088..2104)
                     /gene="istA"
                     /locus_tag="VGA78_13350"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX9894909.1"
                     /translation="MLLKHLLDQGLSKAAIARQLDVSRGVIYHWIHTGQLERDLSGSV
                     PRVRVGRPTKLTPYLPILTTRLTTYPELSAVRLFEEVRAAGYAGGITQLRDVVARLRP
                     RPEPEPVIRFETLPGQQAQVDFAEFRFPWGKRFALLVVLGYSRLLWLRFYPRQTMAIV
                     IEGLEAAFQAFGGVPQELLFDQMRAVITADGRPRGEKLLENAEFLRFAAHCAFRIRAC
                     RPYRAQTKGKVERPVGYVRTNLIYGRDFLGDADLAQQTEHWLDHTANVRVHGTTGAVP
                     RERFEQEERPVLQPLATRPYRSVMPLPPTRPIRTGLTVPDRGLVTVERRPLGSYAALA
                     EATG"
     gene            complement(1989..3119)
                     /locus_tag="VGA78_13355"
     CDS             complement(1989..3119)
                     /locus_tag="VGA78_13355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894910.1"
                     /translation="MRALVALLLLVPGASGAGAQSSPPSRDTTPAGTGGPIATLAAWA
                     DEVWLTLLDRDGSYFGRLAEQGTFQRFNRLMDHEYELDLATGLFTGSETARWAPVRSG
                     FRAAGASISHPLLLNVAEWRHDIPVAGPVAFVPRFLRQHSLSTRRDYLEVAVEWRDLG
                     PLRALRGGFGVHAFKASGDLELGVQLGSSAGSPGLSAGFRLALVDAFTNPVFSLAGRD
                     PAQADTHYHYQAKPAAARLDLTWIYQNFRLELFGGASTRSRVQVTFPNTGDPSFTQSE
                     DFRFGGALVEVAPCHHRFEIVQNHRVKLHTPSLVLAGSCPARSPLHVASPLGGGVSVR
                     MGATGALETLAGSGPLEGRHRPAAGREPRRHLPLDSHRPAGA"
     gene            complement(3206..3604)
                     /locus_tag="VGA78_13360"
     CDS             complement(3206..3604)
                     /locus_tag="VGA78_13360"
                     /inference="COORDINATES: protein motif:HMM:NF042735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9894911.1"
                     /translation="MATTTATTPSVASIAEELVNLCRAGRNLEAVEKFYAPTVVSVEP
                     VAMQNMPAEMSGIQAIREKHTWWEQNNEVHSVEVNGPFLGRDQFAVQYVWDTTFKPSG
                     QRKKGTEMALYTVKDGKIVREQFFYHMPGA"
     gene            complement(3735..7379)
                     /locus_tag="VGA78_13365"
     CDS             complement(3735..7379)
                     /locus_tag="VGA78_13365"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894912.1"
                     /translation="MRITRNTALIALLALPATLVAQAPAGGAAGGPPKKPLPLEASRK
                     AEFTATKGTWISLDVSPDGQTIVFDLLGDLYTLPIAGGKATRLTDGLAYDAQPRFSPD
                     GKKVVFISDRSGGDNVWIMSLDGEDTTQVTQGNGNLYVSPEYVPDGKYVVASRTGGLG
                     GAHKIWMYPVEGGSGLQLTRDPANLKTLGAAFTPNGRYMWFTARQGDWHYNAAMPQTF
                     LGWYDRETGRISQMSNRYGAGFRPVISPDGRWMTFGGRHETRTGLRIRDLKNGEERWL
                     LFPIQRDDIESRAPLDFLPGYSFTPDSRQLVISYGGEIWRVAVEGGTPQKIAFEAPVK
                     LDVGPEVKFSYRIDTAAAHTAKQIRNATPSPDGKRLAFTSFDRLYVVDLPDGTPRRVS
                     SANTGEYHPAWSPDGTSLAWVSWDDRTGGHIWKTAVQGRMRPVQVTRAAALYYNIAWS
                     PNGSRIVASRAPARQLQEATGAFFGPVGAEFVWVASAGGDATLISPAGNRDVMQFVAD
                     DTTRIYAYGPAEGLVSFRWDGTDVKQHLRVNGPPPPAAGNPHEDEANLVYLPRRLGPI
                     PANLLQTGPHPDDPTEPAPPVNPAGLILIGPKGDQALAQVGRDLYTLPIPVVGGQVPT
                     ASVAQTTGGPVPVRKLTEVGAEFPAWSSDGRLVHWSIGNAFFTYNLDRAKVVEDSLKA
                     IEKAKADSTKRATAAADSLKKLKTRVDSLTKANAPVPDSLKIPFDSLTARAKADSIVK
                     AKADSTAKAKADSLKAKGDTAKKAEEKPGYKPDHRRFKVESSRDLPRGVVVLRGARAI
                     TMKGKEIIENADVVVRDNRIVAVGPQGQVQVPGGARVIDVTGKTVLPGYVDTHYHPQW
                     LHIEFHQAQAWQYLATLAYGVTTTRDPQTATSDVVSYQDRVETGGAIGPRIYSTGPGV
                     FAGENIRDLDHAKNVLRRYSDYWDTKTLKMYMSGNRQQRQWIIMAAKELGLMPTTEGG
                     LDFKLNLTHAMDGYPGIEHALPIAPIYDDVVQLFKASQTTNSPTLLVSYGGPFGENYF
                     YTTENVLGDKKLARFMPQDQIDARARRRGAFFGYPQMGWFHKDEYVYPKHAEFVKALV
                     EGGARAGVGSHGQIQGIGYQWELWAMASGGIAPHDLLRVATIYGAEAIGMGQDVGSLE
                     AGKFADLQVLDANPLENIRNTNTIRYVMKNGRLYEGDTLNEIWPRKLPLSVQHWARQG
                     PQSVNAGIPE"
     gene            complement(7493..10741)
                     /locus_tag="VGA78_13370"
     CDS             complement(7493..10741)
                     /locus_tag="VGA78_13370"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894913.1"
                     /translation="MSVDVSPDGQTLVFDLLGDLYTLPITGGAATRLTSGMAYDAQPR
                     FSPDGKKIAFMSDRSGGDNVWVMSLDGRDTVQISNGHEDFTVSPEWTPDGKFVVVSRG
                     PGGFGLPKLWLYDIQGGAGTQLTRGPGAGGYFGAAFGPDGRYVYYGRRNGLWQYNAAM
                     PQFQVWVYDRETATETPFTQRYGSGFRPAISPDGKLLVYGSREGAETGLRIRELATGV
                     ERWLAHPIQRDNMEAIPDLDVIPGYSFTPDSRAIVISYGGELWRVPVDGSAATKIPFT
                     ANADLPVGPEVRFDYRIEDTPTFNVRQIRDPVPSPDGRRVAFTALDRLYVADLPNGTP
                     RRLTTDDVGEYYPTWSPDGTAIAYVTWTDNGGHLMRVSATGGAPTRLSAEAAYLQRPV
                     WSPDGRRIVVTRAPAREGKEAVDPFVGSGLGAEFVWFAAEGGEPTLISPTLGRGSLHF
                     TAKPDRIYLYGTAPAQPGQTGFPGLSLMSMRWDGTDVQQHVRATGPLPLGFGWPDPSM
                     TVDDFLKQGDIRMPPPVWDREPTVQGPPAGVIRMAPRGELALGTSGRDIWVFRVPQVG
                     GAPASINLAKPDSAATRVLRLTDIGGEFPSWSADGSKIHWSIGSALVTYDVERGLAVD
                     DSLRRARVDSATRFSHQYRPVEQRFLVAAPRDVSQGTVVLRGGRALTMNGREIIENAD
                     IVVRNNRIVSVGPRGTAPADARVIDIAGKTVIPGFVDTHSHMWNLWGMHWSQPWIYLA
                     NIAYGVTTTRDPQTATTDVLAYQDRVDAGDAIGPRVYSTGPGVFWSERINDLDRARSV
                     LKRYSTYWDTKTIKMYEAGNRRTRQLIIEAARELQLMPTTEGALEFKKNMTHAMDGYA
                     GVEHTIPITPMFEDVVQLFKASGTTNTPTLLVSYGGPWAENYYYTTTDVVGDAKLRRF
                     TPREELDGKTRRRGAGNGPGPSGWVHDEEYAFRKHAGFSKAMVEGGARIGIGSHGQLQ
                     GLGYHWELWSEASGGMHPHDALRVATIYGAEAIGLGKDLGTLQAGKLADLIVLDRDPL
                     ADIKNTNSIRYVMKNGRLYEGDTLNEIWPRQRPLPEQPWRNGDPVANTSIKW"
     gene            11011..11775
                     /locus_tag="VGA78_13375"
     CDS             11011..11775
                     /locus_tag="VGA78_13375"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX9894914.1"
                     /translation="MLTQTVLATGAIVWLTATAAGAQAVLRGRVLEDSTRVPLSDVEI
                     LVQNVPVMRSAATGEFLLHGLPSGVQVILFRRIGFRPVRLRALLTEGDTLDRTKSMER
                     STVELAPLEVTASSVPPGMERFAERRARGMGTYWDTKLMRASEHRRLAEMLTAVSGIR
                     PLFRGNATFATTRRGGAGISTKGGEPPCYMAVWLDGIQIFAPTSLGGTAPPDLNKFKT
                     YDLEAVEVYPGPATLPQELGGTGGNCGAIVLWSRRR"
     gene            complement(11778..15107)
                     /locus_tag="VGA78_13380"
     CDS             complement(11778..15107)
                     /locus_tag="VGA78_13380"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894915.1"
                     /translation="MRPSQGLVLLAVLTLTAPPCLVAQNSARPAAARRDLPLEPARAA
                     KFSSTRGTWISVDVSPDGQTLVFDLLGDLYTLPIGGGKAARLTDGLAYDGQPRWSPDG
                     KRIAFVSDRGGGDGIWLISLDGRDTSQVTRGKDDGYISPEWTPDGQYLVATRTSGTPP
                     GKLWMYHVDGGSGIQLLREQPGQIALGAALSPDGRYIWHAVRQGGWQYNAILPQVQLA
                     TFDRETGTSTRVTDRYGSAFRPALSPGGKWLAYGTRHDAQTGLVLRDLATGEERWLAY
                     PVQRDNQEAFPDLDLLPGYSFTPDSRAIVMSYGGELWRVPVDGSAPARIPFTADVDLP
                     LGPELRFEYSISDSASVVARQIRDPVPSPDGTRVAFTALNHLWLMNLSDSTPRRLTRL
                     DDGEFYPSWSPDGQWLAFVTWTETGGHIWKARADGRSQPVRLTRDAATYYKTAWAPNG
                     RRIVALRADARELMETLQRFGGGQAARFIWVPAEGGAATVIAPSGGRVSPHFTGDTTR
                     IWAYRGADGLVSFRWDGSDEQAHLKVTGALPPGGTGNPPPAVLVLMAPRGEQALAQVG
                     MDFYVVPVPKVGGPAPSFSVTSPENAAVPVRKLTDIGGEFPAWSADGRKVYWAIGNAL
                     VTYDLDRAKAFDDSLRTLGRTGGRADSTRTPADTTRRTTPSYKPVEIRIRVTGRRDLP
                     HGTAVLRGARAITMRGAEVIENADIVIRNNRIVAVGPSGQVSVPADARVIDVTGKTVL
                     PGLVDTHGHLRHSPSVHTTQPWALLANLAYGVTTSRDPQTGTTDVLSYSDRVDLGEVL
                     GPRVFSTGPGVFSGERIRDLDHARNVLKRYSQYYDTHTLKMYGAGNRQQRQWIIMAAR
                     ELKLMRTTEGSLSHRLDMTHIMDGYSGVEHNLPLTPMYEDMVQVFKASQTTTTPTLLV
                     SYGGPWAENWYYTHEEVHDDPKLRRFTPASEIDSKTRRRGQGAGGSPGPGGWFREDEY
                     VFKKHAAFIKDVLAAGGRAGIGSHGQLQGLGYHWELWTVQSGGMTTHDALRMATILGA
                     EAIGLGREVGSIEAGKLADLVVLDRDPLQNIRNSNSVRYVMKNGRLYEGDTLNEVWPR
                     QRPLPRMPWIHTDPTPAAGIR"
     gene            15225..16178
                     /locus_tag="VGA78_13385"
     CDS             15225..16178
                     /locus_tag="VGA78_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894916.1"
                     /translation="MTGSLRLTVGLALAGVACSRPPTQRSLVVPVSAEALSLLGDTLW
                     SLPVLPARGPKLVEQLSRARSRLASSPFDANAALVVARRTADLGRLREAVNLYTRAGE
                     LHPTDARMPRYRGEVLLQLRELDLAQRDFQTAAQRLMGKKAETEFVELDDGLLGSTLQ
                     FNIYHLLGLTYYIKGEFPKARTTLIEAAKAASTGDDLAAAGLWLFFVTRRLGAVDEAR
                     LLLTSLSDSVQVTARQPEITLLLAFRDGLPYDSLHLDLRQRFTTEREALLGYALGFAL
                     LLLERREEAELVFEQVRTYHDWSSLPVLAAESELVRLRKRQ"
     gene            16248..17210
                     /locus_tag="VGA78_13390"
     CDS             16248..17210
                     /locus_tag="VGA78_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9894917.1"
                     /translation="MNIRPGFGRVLVLFTVYGSLFTVFSSPFTAAGNAQGPVEAISLL
                     GDSLRRPVLPPEAEARLAAQLREAESDLSHRPGNADGIIWVGRRTAYLGRYTEAIAIY
                     STGLARHPGDARLYRHRGHRYLTTRQIDRAIADLLYGARLVRGRPDEVEPDGQPNARN
                     IPTSTLQSNIWYHLGLGYYVRGDFRRALASYRECLAVSRNADMQVATRYWLYMTLRRM
                     GLSGPAREVLQPVTRSMDIIENGAYHRLLLLFKGELAADSLTGSGEDRALQDATTGYG
                     LGNWHYLNGRRDEARRIWRRVIETGPWASFGYLAAEAELSRSKD"
     gene            complement(17241..>17453)
                     /locus_tag="VGA78_13395"
     CDS             complement(17241..>17453)
                     /locus_tag="VGA78_13395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894918.1"
                     /translation="RVSPEGDAWVERHLPAGSPRQFDIFGGDGKIKRRVILPAGRELI
                     GFGKGAVYLKETTEDDLVFLERYTVR"
BASE COUNT         2766 a         5740 c         5976 g         2971 t
ORIGIN      
        1 aagcacccga ctatcgagct caagggccgc ggttcgggct accgagacgc gcgctcgccc
       61 gcccagaccg ctggtctcct ccagcagatc gagcccgctt ccgccgggtg gatccggacg
      121 ccgttcggtg gtcgaccgcg cggtagtccc gaagagtgcc agcgccagtc ggccggaggg
      181 tgtgtcaacg ccggttgaaa ttgcacactt tcaccggctg aaattgtaca ctccgtcggt
      241 ggggacgagc cctaggtcgt cgccgcctcc cgcgctcggg cgcgccgctt gcggggtggt
      301 ggctcgggcg cctgtccgcg tcggtgtcgg atgccgtaga gttcggcgtg gtggcgcatg
      361 cggtagctgt tcccccggat gttcacgatg tggcagtggt ggaccagccg gtcgatcagc
      421 gcgccggcca tgacctcgtc gccgaagacc tcgccccatt cgtcgaagct cttgttcgag
      481 gtgaggatcg tggccccggt ctcgtagcgc cggctcatga gctggaagaa cagcatggcg
      541 ccggtgcggc tgatggggag gtagccgatc tcatcgacca cgaggaggct cgggaaaatg
      601 agcgtcttga ggcgctgggt gagccggccg gcctgctggg cttcctcgag ggaggtgatc
      661 aggtcggcca gcgtgccgta gtagacgcgg cggccgctct gggcggcggc gatggccagg
      721 ctgatggcga ggtgggtctt cccgacgccc gggggcccga gcagcaccac gttctcgtgg
      781 cgctccagga aaccgagggt gtggaggtta tcgatctgct cgcgcttgag cgagggctgg
      841 aagctgaagt cgaagtcggc cagggtcttg atcgccggca gccgggagga gcgcatggcg
      901 gccacgagcc gccgggtatt gcggaggctg atctgggcgc ctaacagggc ttcgatcgca
      961 gcgggcgtgg gcaggtgccc gccatcgacc tggcgcagaa tgtcgtcgag cgcttccagc
     1021 gcccccggca tcttgagatc ggcgagttga gcccggaggc gctcgcgcgg ggagagggga
     1081 ctcgggctca tccggtggcc tccgccaggg cggcatagct ccccaggggc cggcgctcga
     1141 cggtcaccag gccgcgatcg gggaccgtga gcccggtgcg gatcgggcgg gtcgggggca
     1201 gcggcatcac gctgcgatag ggacgggtcg ccagcggctg cagcactggc cgctcctcct
     1261 gctcgaagcg ctcccgcggc accgctccgg tggtgccatg cacccggaca ttggcggtgt
     1321 ggtcgagcca gtgctccgtc tgctgggcca gatcggcatc gccgaggaag tcgcggccgt
     1381 agatcagatt ggtccgcaca tagccgaccg ggcgctcgac tttgcccttg gtctgggcgc
     1441 gatagggccg gcaggcccgg atccggaagg cgcaatgggc ggcgaagcgg agaaattcgg
     1501 cattctcgag cagcttctcc ccccggggcc gcccgtcggc cgtgatcacg gcccgcatct
     1561 ggtcgaagag gagttcctgg gggaccccgc cgaaggcctg gaaggcggcc tccagcccct
     1621 cgatcacgat cgccatcgtt tgccggggat agaaccgcag ccacagcaag cgggaatagc
     1681 ccagcaccac gagcaaggcg aagcgcttcc cccagggaaa ccggaactcc gcgaaatcga
     1741 cctgcgcctg ctgccccggc agggtctcga accggatgac cggctcgggc tccggccggg
     1801 ggcggagccg ggccacgacg tcccgcagct gggtgatgcc gccggcgtac ccggccgccc
     1861 ggacttcctc gaagagccgc accgcactca gctcggggta ggtcgtcagc cgggtcgtga
     1921 ggatcgggag gtagggagtc agcttggtcg gacggccgac gcggacccgc ggcacgctgc
     1981 cgctcagatc acgctccagc tggccggtgt gaatccagtg gtagatgacg ccgcggctca
     2041 cgtccagctg ccgggcgatg gcggccttcg agaggccctg atccagcaag tgtttcaaga
     2101 gcaccagtcg ctcccatccg tacactcacg cctccaccca agggagacgc aacatgaagg
     2161 ggggaccggg caggacacga cccggccagg acgagcgacg gagtgtgcaa cttcacccgg
     2221 tgattctgta caatttcaaa ccggtgatga cagggtgcca cctcgaccag agcgccgcca
     2281 aagcggaagt cttcggactg ggtgaacgac ggatcgcccg tgttcgggaa ggtgacctgc
     2341 acccggctcc gggtactggc tcctccgaac agctcgagcc ggaagttttg gtagatccag
     2401 gtgagatcga ggcgtgcggc ggccggcttc gcctgatagt ggtagtgagt gtccgcctgg
     2461 gccggatcgc gaccggccag tgagaaaacc ggattggtga aggcatcgac cagcgccaag
     2521 cgaaacccag ccgagaggcc gggagaccca gccgaactac ccagctgaac ccccaactcg
     2581 agatcacccg aggccttgaa agcatgcact ccgaaaccgc cccgcagcgc ccgtaacggc
     2641 ccaaggtctc gccactcgac cgccacttcg agatagtcgc gccgggtgct cagtgagtgc
     2701 tggcgcagga accgggggac gaatgccacc ggtccagcga ccggaatgtc gtggcgccac
     2761 tcggcgacat tgaggagcag tggatggctg atactcgctc cggcggcccg gaacccgctg
     2821 cgcaccgggg cccatcgggc ggtctcggag ccggtgaaga gcccggtggc cagatcgagc
     2881 tcgtactcgt gatccatcag ccgattgaag cgctggaagg tgccctgctc ggcgagtcgc
     2941 ccgaagtagg agccatcccg gtcgagcaga gtgagccaga cctcgtcagc ccaggccgcg
     3001 agggtggcga tcggcccgcc cgttccggcg ggtgtggtgt ctcgcgaggg aggactgctc
     3061 tgggccccgg cacccgacgc gcctggaacc agcagcagaa gggcaaccag cgcacgcatt
     3121 ggggtcacgg tcgaagagag ccgaaagggg tcgaagagga ttgccccctt cgaccccctt
     3181 cgaccccctt cgaccgtctt cggaatcagg ctccgggcat gtggtagaag aactgctcgc
     3241 ggacgatctt gccgtccttg accgtgtaca gcgccatttc ggtccccttc tttcgctggc
     3301 cgctcggttt gaacgtggta tcccaaacgt actgcaccgc gaactggtcc cgacccagga
     3361 aggggccatt cacttcaacg ctgtgcactt cgttgttctg ctcccaccag gtgtgcttct
     3421 cgcggatggc ttggatgccg gacatttcgg ccggcatgtt ctgcatcgca accggctcga
     3481 cactgacaac cgtgggcgca tagaattttt cgaccgcctc caggtttcgc ccggcacgac
     3541 agagattcac cagctcctcg gcaatcgagg cgactgaggg ggtggtagcg gtagtcgtgg
     3601 ccatgatact cttctccttc cgtgattcag ttcccatgcg gatgttgact gcaccggcgt
     3661 ctcggaagat atcacgccat ccggggcgaa gggtacgaat gctaccccct tcgaccgcct
     3721 tcgaccgcct tcgactattc gggtatgccc gcgttcaccg actgcggccc ctgccgggcc
     3781 cagtgctgca cgctgagggg cagcttccgg ggccagatct cgttgagggt gtcgccttcg
     3841 tagagccggc cgttcttcat cacataccgg atcgtgttgg tgttccggat gttctccagg
     3901 ggattggcgt ccagcacctg caggtcggcg aatttgccgg cctcgagcga tcccacatcc
     3961 tggcccatgc cgatcgcctc ggcaccgtag atcgtcgcga cccgcagcag atcgtggggc
     4021 gcgatcccgc ctgaggccat ggcccagagc tcccactggt agccgatgcc ctggatctgg
     4081 ccgtgacttc ccactccggc ccgggctcca ccctcaacca acgccttgac gaactcggcg
     4141 tgcttggggt agacgtactc gtccttgtgg aaccagccca tctggggata gccgaagaag
     4201 gcgccccgac gccgggcccg ggcatcgatc tgatcctggg gcatgaaccg ggcgagcttc
     4261 ttgtcgccta acacgttctc ggtggtatag aagtaattct caccgaaggg accgccgtat
     4321 gacaccagca gcgtggggct gttggtggtc tggctggcct tgaacagctg caccacgtcg
     4381 tcgtagatcg gcgcgatcgg cagcgcatgc tcgatgccgg ggtagccgtc catcgcgtgg
     4441 gtcaggttga gcttgaagtc caacccgccc tcggtggtgg gcatcaaccc cagctccttg
     4501 gcggccatga tgatccactg ccgctgctgg cggttgcccg acatgtacat cttgagcgtc
     4561 ttggtatccc agtaatcact gtagcgccgc agcacgttct tggcgtgatc cagatcgcgg
     4621 atgttctcac ccgcgaacac gcccgggccg gtggagtaga tccggggacc gatggcgccg
     4681 ccggtctcga cccggtcctg gtagctcacc acgtccgacg tggcggtctg gggatcccgg
     4741 gtggtggtca ccccgtaggc cagtgtcgcc aggtactgcc aggcctgcgc ctggtgaaac
     4801 tcgatgtgga gccactgggg gtggtagtgg gtatcgacgt agccgggcag gacggtcttg
     4861 ccggtgacgt cgatgacccg cgcgccgccg gggacctgca cctgcccctg gggcccgacc
     4921 gcgacgatcc gattgtcccg taccaccacg tcggcgtttt cgatgatctc cttccccttc
     4981 atcgtgatgg cgcgagcgcc tcggagcacc acgacacccc ggggaaggtc gcgcgacgac
     5041 tcgaccttga agcgccggtg gtccggtttg tagcccggct tctcctcggc cttcttggcg
     5101 gtgtcgccct tggccttgag gctgtcggcc ttggccttgg cggtcgagtc ggccttcgcc
     5161 ttcacgatcg agtcggcctt ggcccgcgcg gtcagcgaat cgaacgggat cttgagcgaa
     5221 tcgggcaccg gagcgttggc cttggtcagg ctgtccaccc gggtcttgag cttcttgaga
     5281 ctatcggccg ccgcggtcgc ccgcttggtg ctgtcggcct tggccttctc gatggccttg
     5341 aggctgtcct cgactacctt ggcgcgatcg aggttgtagg tgaagaacgc gttgccgatg
     5401 gaccagtgca ccaagcgtcc gtccgaagac caggccggga actcggcccc gacctcggtc
     5461 agcttccgga ccggcaccgg tccaccggtc gtctgggcca cgctggcggt cggcacctgg
     5521 ccgcccacaa ccgggatcgg cagggtgtag aggtcgcgac ccacctgcgc cagcgcctgg
     5581 tcgcccttgg gcccgatcag aatcaagccg gccgggttca ccggcggggc cggctcggtc
     5641 ggatcatccg ggtggggccc ggtctgcagc agattggccg ggatgggccc cagccggcgc
     5701 ggcaggtaga ccagattggc ttcgtcctcg tgcgggttac ccgctgccgg aggcggcgga
     5761 ccgttcaccc gcaggtgctg cttcacgtcg gtcccgtccc agcggaacga caccagacct
     5821 tcggccgggc cgtaggcgta aatgcgcgtg gtgtcatccg ccacgaactg catcacgtcg
     5881 cggttgccgg ccgggctgat gagggtcgcg tcaccccccg ccgatgccac ccacacaaac
     5941 tcggcgccga ccgggccgaa gaaggcgccg gtggcctcct gcaactggcg cgcgggggct
     6001 cgggacgcga cgatgcggct gccgttaggc gaccacgcga tgttgtagta gagcgccgcg
     6061 gcgcgggtca cctgcaccgg ccgcatccgt ccctgcaccg cggtcttcca gatgtggccg
     6121 ccggtccggt cgtcccagct cacccaggcc agcgaggtgc cgtcgggcga ccaggcgggg
     6181 tgatactccc ccgtgttggc cgagctgacc cggcgcggcg tcccatcggg gagatcgacc
     6241 acatacaacc ggtcgaacga cgtgaaggcc aggcgcttgc cgtcggggga aggtgttgcg
     6301 ttgcggatct gcttggcggt gtgcgccgcg gcggtatcga tccggtagct gaacttgacc
     6361 tcggggccca cgtcgagctt gaccggggcc tcgaacgcga tcttctgggg cgtcccgcct
     6421 tccaccgcca cccgccagat ctcgccgccg taagagatca ccagctggcg cgaatcgggc
     6481 gtgaagctgt acccgggaag gaaatcgagc ggggcccgcg attcgatgtc gtcccgctgg
     6541 atcgggaaca gcagccagcg ttcctcaccg ttcttgaggt cgcgaatgcg gaggccggtc
     6601 ctggtctcat ggcggccgcc aaaggtcatc caacggccat cgggcgaaat caccggccgg
     6661 aacccggcac catagcggtt ggacatctga ctgatccgcc cggtctcccg gtcgtaccac
     6721 cccaggaacg tctggggcat cgccgcgttg tagtgccagt cgccctgacg agccgtgaac
     6781 cacatgtagc gcccattagg ggtgaacgca gcgcccaacg tcttgaggtt ggccggatcg
     6841 cgggtcagct ggagcccgct cccgccttcg accggataca tccagatctt gtgcgccccg
     6901 cccaggccac cggtccggct ggcgaccaca tacttgccgt cgggcacgta ttcgggcgag
     6961 acgtagaggt tgccgttccc ctgggtcacc tgggtggtgt cctcgccgtc gagcgacatg
     7021 atccagacgt tgtcgccgcc gctccggtcg gagatgaaca ccaccttctt gccgtccggg
     7081 ctgaagcggg gctgggcatc gtacgccagg ccgtcggtga gccgggtcgc cttcccaccg
     7141 gcgatcggga gggtgtagag atcacccagc agatcgaaga cgatggtctg accgtccggg
     7201 ctcacgtcga gcgaaatcca ggtgcccttg gtggcggtga attcggcctt gcgggatgcc
     7261 tcgagcggca gcggtttctt gggcgggccg ccggccgcgc cgccggcggg cgcttgggcg
     7321 acgagagttg ccggcagcgc cagcaaggcg atcaacgccg tattccgggt aattcgcatg
     7381 agatccttcg ctgcgctcag gatgacagca ttgacgattg acaattgatg attgacgatt
     7441 gcggccgggc cgctgttccg aaccgtcccg tgactgtttg tcatggcgcg actcaccact
     7501 tgatcgaggt gttggccacg ggatcgccgt tgcgccaggg ctgctcgggc agcggacgct
     7561 ggcggggcca gatctcgttg agggtgtcgc cctcgtagag ccggccgttc ttcatcacgt
     7621 agcgaatcga gttggtgttc ttgatgtcgg ccagcggatc gcgatccagc acgatcagat
     7681 cggccagctt gccggcctgg agcgtaccca gatccttgcc caggccgatg gcctcggcac
     7741 catagatggt cgccactctg agagcgtcgt ggggatgcat tccgcccgac gcctccgacc
     7801 agagctccca gtgatagccc aggccctgga gctggccgtg gctcccgatg ccgatccggg
     7861 ctccgccttc caccatcgcc ttgctgaacc cggcgtgctt gcggaaagcg tattcctcgt
     7921 cgtgcaccca gccgctgggc ccggggccgt tgccggcgcc ccggcggcgg gtcttgccgt
     7981 cgagctcttc ccgcggcgtg aagcggcgca gcttggcgtc ccccaccacg tcggtggtgg
     8041 tgtagtagta gttctccgcc cacggtccgc cgtaggacac cagcaaggtc ggcgtgttgg
     8101 tggttcccga ggccttgaag agctgcacca cgtcctcgaa catcggcgtg atgggaatgg
     8161 tgtgctccac gccggcataa ccatccatgg cgtgggtcat gttcttcttg aactcgagcg
     8221 cgccctcggt ggtgggcatg agctggagct cgcgcgccgc ctcgatgatg agctggcggg
     8281 tccggcgatt gccagcctca tacatcttga tggtcttggt gtcccagtag gtgctgtagc
     8341 gcttgagcac gctccgggcc cggtccaggt cgttgatccg ttcgctccag aagacgcccg
     8401 ggccggtcga gtagacccgg gggccgatgg cgtcgccggc atccacccgg tcctgatagg
     8461 ccagcacgtc ggtggtggcg gtctgaggat cgcgggtggt ggtcaccccg taggcgatat
     8521 tggccaggta gatccagggc tggctccagt gcatccccca cagattccac atatgggagt
     8581 gggtatcgac gaagccgggg attaccgtct tgccggcaat gtcgatgacc cgggcatcgg
     8641 ccggggcggt accgcgcgga cccacgctca cgatgcggtt gttccggacc acgatatcgg
     8701 cgttctcgat gatctcgcgg ccgttcatgg tgagggcccg gccgccgcgc aacaccacgg
     8761 tcccctggga tacgtcccgc ggcgccgcga ccaggaagcg ctgttcgacc ggccggtact
     8821 gatggctgaa ccgggtggcc gagtcgaccc gggcccgccg caggctgtcg tccaccgcca
     8881 ggccccgctc cacatcatag gtcaccagcg cgctgccgat cgaccagtgg atcttggagc
     8941 cgtcggcgct ccaggagggg aactcgccgc cgatgtcggt aagccggagc acccgggtcg
     9001 cggcgctgtc aggcttggcc aggttgatgc tggccggagc gccaccgacc tgcggcaccc
     9061 ggaagaccca gatgtctctg ccgctcgtgc ccagtgccag ttcccctcgg ggcgccatcc
     9121 ggatgactcc cgccggcgga ccttgcaccg tcggctcccg gtcccagacg gggggcggca
     9181 tcctgatatc gccttgcttc agaaagtcat cgacagtcat ggagggatca ggccatccga
     9241 aaccgagagg cagcggcccg gtggcccgga cgtgctgctg gacatcggtg ccgtcccagc
     9301 gcatcgacat cagcgacagc ccagggaacc cggtctgtcc cggctgtgcc ggcgccgtgc
     9361 catacaggta gatgcgatcg ggcttggcgg tgaaatgcag cgacccgcgc cccaacgtcg
     9421 gactgataag ggtgggctcc ccaccttccg cggcgaacca aacgaactca gcccccaagc
     9481 cgctcccgac gaagggatcg accgcctcct tcccctcccg ggccggggcc ctggtgacca
     9541 cgatgcgcct accgtcgggg gaccagaccg gccgctgcag gtaggccgct tcagcggaga
     9601 gccgggtcgg cgcgcccccg gtggcgctca cccgcatgag gtggccgccg ttgtcggtcc
     9661 aggtgacata ggcgatcgcg gttccatccg gcgaccaggt ggggtagtac tccccgacgt
     9721 catcggtggt caggcgccga ggcgtcccgt taggcagatc cgccacgtag agtcgatcga
     9781 gcgcggtgaa cgcgacccgc cggccgtccg gcgagggcac cggatcccgg atctggcgga
     9841 cgttgaaggt gggggtgtcc tcgatccggt aatcgaaccg gacttccggc ccgaccggca
     9901 ggtcggcatt ggcggtgaag gggatcttgg tggcggcgct gccgtcgacc ggcacccgcc
     9961 acagctcgcc gccgtaggag ataacgatgg cgcgggagtc gggggtgaag gagtaacccg
    10021 ggatcacatc gaggtcgggg atcgcctcca tgttgtcccg ctgaatcgga tgggccagcc
    10081 accgttccac cccggtggca agctcccgga tccggagacc ggtttcggcc ccttcccggc
    10141 tgccgtagac cagcagcttg ccgtcggggg aaatggccgg ccggaagccg gagccgtatc
    10201 gctgcgtaaa gggagtctcg gtggcggtct cgcggtcgta gacccagacc tggaactgcg
    10261 gcatcgcggc gttgtactgc cagaggccgt tccgccggcc atagtagacg tagcgcccgt
    10321 cggggccgaa ggcggcaccg aagtagccgc ccgcaccagg cccccgggtc agctgggtgc
    10381 cggctccgcc ctggatgtcg tagagccata gcttgggcag cccgaatccg cccggcccgc
    10441 gggacaccac cacgaacttc ccgtccggcg tccattcggg cgagacggtg aagtcttcgt
    10501 gaccgttgga gatctggacc gtgtcccggc cgtcgagcga catgacccag acgttgtcgc
    10561 cgccgcttcg gtcggacatg aaggcgatct tcttgccatc cgggctgaac cgcggctggg
    10621 catcgtaggc catcccgctg gtcagccgag tggcggctcc accggtgatg ggcagcgtgt
    10681 agagatcacc gagcaggtcg aagaccaggg tctggccgtc cgggctcaca tcgacggaca
    10741 tccaggtacc gcggctggtg gtaaagcgcg ccgaccgggt ggggacaagg gtcaacccgc
    10801 gcttgaccgt atcctctgtc gtcggtcgaa gacggtcgaa gggggtcgaa gggggtcgaa
    10861 gagggttggc tccgagaaca ttcgggccga gcagggcgag tgcggcgaac gcgacggcga
    10921 gtcgcggcaa cgtctgaaag gcggtcatgc tggcagtgct ccggcaggag acaatgggta
    10981 ggacaaatga tactctatag gtaaaggggc atgctcaccc aaacggttct tgcgaccggc
    11041 gccatcgtct ggctgaccgc cactgcggcg ggagcccagg ccgtgctccg gggccgggta
    11101 ctcgaggatt cgacccgggt ccccctctcc gacgtggaaa tcctggtgca gaacgtcccg
    11161 gtcatgcgca gtgccgccac cggtgagttc ctgcttcacg ggctgccgtc gggcgtgcag
    11221 gtcatcctct ttcgccgcat tggattcagg ccggtgcggc tccgcgcgct gctcaccgaa
    11281 ggcgacacgc tggatcgcac caaatccatg gagcggtcga cggtggagct ggctccgctc
    11341 gaggtcacgg ccagctccgt tccacccgga atggaacgtt ttgcggagcg gcgggcgcgc
    11401 gggatgggaa cctactggga caccaagctg atgcgggcgt ccgagcatcg ccgtctggcc
    11461 gaaatgctga ccgcggtcag cgggattcgg ccgctgtttc gaggaaacgc caccttcgcg
    11521 accaccagac gggggggcgc cgggatttcg acgaagggcg gggagccgcc ctgctacatg
    11581 gcggtctggc ttgatggaat ccagatcttc gcaccgacgt cgctcggtgg gaccgccccc
    11641 ccagacctga acaagttcaa gacctacgat ctcgaggcgg tcgaggtcta tcccggccca
    11701 gccacactcc cccaggagct gggcggcacc ggcggcaact gcggtgcgat cgtgctgtgg
    11761 agccgccgcc gctgagctca ccggatcccc gccgcggggg ttgggtcagt gtggatccag
    11821 ggcatccggg gtagcggccg ctgccgaggc cagacctcgt tcagggtatc gccctcgtag
    11881 agccttccat tcttcatgac gtagcggacc gagttgctgt tccggatgtt ctggagtgga
    11941 tcccggtcca gcaccaccag gtcggccagc ttgccggctt cgatcgaccc cacctcccgg
    12001 cccagaccga tggcttcggc ccccaggatc gtggccatgc gcagcgcgtc atgggtcgtc
    12061 atcccgcccg actggaccgt ccagagctcc cagtggtacc ccaacccctg gagctggcca
    12121 tggctgccaa tgccggcccg ccctccggcg gccaacacat ccttgatgaa ggccgcgtgt
    12181 ttcttgaaga cgtattcgtc ttcacggaac cacccgcccg gcccgggcga gccacccgcc
    12241 ccctgtcctc tgcggcgggt cttgctgtcg atctccgagg cgggagtgaa gcgccgcagc
    12301 ttaggatcgt cgtgcacttc ttcgtgggtg taataccagt tctcggccca gggtccgccg
    12361 taggagacca gcagggtcgg cgtggtggtg gtctggctcg ccttgaacac ctggaccatg
    12421 tcctcgtaca tgggcgtgag cggcaggttg tgctccacgc cgctgtagcc gtccatgatg
    12481 tgggtcatgt ccagccggtg cgagagtgag ccctcggtcg tgcgcatcag cttgagctcg
    12541 cgggccgcca tgatgatcca ctgccgctgc tgccggttcc ccgccccgta catcttgagc
    12601 gtgtgggtgt cgtagtactg gctgtagcgt ttgagcacgt tgcgggcgtg atccaggtcg
    12661 cgaatgcgtt cgcccgagaa cacgcccggc ccggtcgaga agacccgcgg acccaggacc
    12721 tccccgagat ccacccggtc ggagtagctc agcacatcgg tcgtgccggt ctgggggtcg
    12781 cggctggtgg tgacaccata cgccagattc gcgagcaggg cccagggttg cgtggtatgc
    12841 acgctggggg aatgccggag atggccgtgg gtatccacca accccggcag cacggtcttc
    12901 ccggtcacat cgatcacgcg ggcatcggcc gggaccgaaa cctgaccgct cggccccacg
    12961 gctacgatcc ggttgttccg gatcacgatg tcggcgttct cgatgacctc ggcgccccgc
    13021 atggtgatag cgcgagcccc tcgcagcacc gccgtgccgt ggggcaggtc acgccggccc
    13081 gtcacccgaa ttcggatctc gaccggtttg taagaaggag tggtgcggcg agtcgtatcc
    13141 gcgggagtcc tggtgctgtc cgcccggccg cccgtccgtc cgagcgtccg cagcgagtca
    13201 tcaaaggcct tcgcccgatc gagatcgtag gtgaccaatg cgttaccaat ggcccaatac
    13261 accttccggc cgtccgcgct ccaggccgga aactcgcccc cgatgtcggt gagctttcgc
    13321 accggcaccg cggcgttttc gggcgacgtc accgagaatg agggagccgg accgccgacc
    13381 ttgggcaccg gcaccacata gaagtccatt cccacctgcg ccagggcctg ttcgccccgg
    13441 ggcgccatca gcaccagcac ggccggaggt ggattcccag tcccaccggg cgggagcgcc
    13501 ccggtcacct tgaggtgggc ctgctcgtcg ctgccatccc agcggaacga gaccaggccg
    13561 tccgcacccc ggtaggccca gatccgggtg gtatcgccgg tgaagtgagg tgagacccgg
    13621 cccccgctcg gtgcgatcac ggtcgcggca ccaccttccg cgggcaccca gatgaagcgg
    13681 gccgcctgtc cgccgccgaa acgctgcagc gtctccatca gctcgcgggc atcggccctc
    13741 agtgcgacga tgcggcgtcc attcggcgcc caggcggtct tgtagtaggt ggccgcgtcc
    13801 cgggtcagac ggaccggctg ggatcgcccg tcggcccggg ccttccagat gtgcccgccg
    13861 gtctctgtcc aggtaacaaa cgccagccat tggccatcgg gcgaccagct ggggtagaac
    13921 tcgccgtcgt cgaggcgggt gaggcgccgc ggagtggaat ccgacaggtt catcagccac
    13981 aggtgattca gggcggtgaa cgcaacgcgg gtcccgtcgg gtgagggaac cgggtcgcga
    14041 atctgccggg ccacgaccga ggccgaatcc gagatggagt actcgaaccg cagctccggc
    14101 ccgagcggca gatccacgtc cgcggtgaac gggatcctgg cgggtgcact gccatcgacc
    14161 ggcacccgcc acaactcgcc gccgtagctc atcacgatgg cgcggctgtc gggcgtgaag
    14221 ctgtatcccg gaagcaggtc gagatcgggg aaggcctcct gattgtcgcg ctgaaccgga
    14281 taggccagcc agcgttcctc cccggtcgcc agatcgcgca ggaccaggcc ggtctgggcg
    14341 tcgtggcgag tgccgtaagc gagccatttg ccgccgggcg acagggccgg ccggaaggcg
    14401 gaaccgtagc ggtcggtcac ccgggtggac gtgccggttt cgcgatcgaa cgtagcgagc
    14461 tgtacttgag gcaggatggc gttgtactgc cagccaccct gacgaaccgc atgccagatg
    14521 tagcggccgt cgggagacag cgccgccccc agcgcgattt gccccggctg ctcccgcagc
    14581 agctggatcc cgctgccgcc gtcgacgtgg tacatccaca gcttgccggg aggggtgccg
    14641 ctggtgcgag tcgccaccag gtactggccg tcgggagtcc actcgggcga gatgtagccg
    14701 tcgtccttcc cgcgggtgac ctgactggta tcccggccgt ccaaagagat gagccagatc
    14761 ccgtcgcccc cgccccgatc ggacacgaac gcgattcgct tgccgtcagg actccagcgg
    14821 ggctggccat cgtacgccag tccgtcggtg aggcgggcgg ctttgccccc gccgatcggc
    14881 agggtataga gatcgcccaa caggtcaaag accagggtct gtccgtcggg gctcacatcg
    14941 accgagatcc aggtcccgcg ggtggagctg aatttggccg ctcgggccgg ctcgagcggg
    15001 agatcccggc gcgctgcggc aggtcgggca ctgttctgcg cgaccagaca ggggggagcc
    15061 gtgagtgtga gaactgccag gaggacaagg ccctggcttg gtcgcattgg gactccggga
    15121 aatcagcggg ggttcaagcg tatcagcccc ggtttcgggg cgccaccgcc cgtacggggc
    15181 tccgccggtg gcggtttccg cctgggaatg ccactgttgt tttcgtgacc ggttcgctgc
    15241 gcctcacggt cgggctggcg ctggcaggag tggcctgcag tcgtcctccc actcaacgct
    15301 cgttggtggt accggtgagc gcggaagccc tctcgctgct gggcgacacc ctgtggtcct
    15361 tgccggtgct cccggcgcgg ggacctaagt tggtggagca gctgagccgg gcccgcagcc
    15421 gtctggcctc gtctccgttt gacgccaacg ccgcgctggt ggttgcacgg cgaactgctg
    15481 acctgggccg gctgcgggag gcagtgaacc tgtacacccg ggcgggcgag ctgcacccca
    15541 ccgacgctcg gatgccccgc taccggggtg aggtcctgct gcagctccgg gagctggacc
    15601 tggcccagcg agatttccag acggcggccc agcggctgat ggggaagaag gccgagaccg
    15661 aattcgtgga attggacgac gggctgctgg gatcgaccct gcaattcaac atctatcacc
    15721 tgctcggcct cacgtactac atcaagggcg agttccccaa ggcccgcacc acgctgatcg
    15781 aggcggccaa ggccgcgtcc accggcgatg atctggccgc cgccgggttg tggctcttct
    15841 tcgtcacccg tcggctgggc gccgtggatg aagcccgcct gctgctcacg tcgctgtccg
    15901 attcggtcca ggtgaccgcc cgccagccgg agatcacgct gctgctcgcg ttccgggatg
    15961 gactgcccta cgattccctc cacctcgatc tgcgccagcg attcaccacc gagcgcgagg
    16021 ccttgctggg ctacgccctg ggctttgcgt tgctgctgct ggaacggagg gaagaagcgg
    16081 agctggtgtt cgagcaggtg aggacctatc acgactggtc gtcgctcccg gtcctggcgg
    16141 cggaatcgga actcgtccgc ctgcggaaac ggcagtaacg gtcaccggtg aacagtgaac
    16201 ggtgaacagt gaacagtgaa cggtgaacgg tgaacggtga acggaacatg aatatccgcc
    16261 ctggattcgg ccgtgtcctg gtgctgttta ccgtttacgg ttcactgttt accgttttca
    16321 gttcaccgtt taccgcagct ggcaacgccc aggggccggt cgaggcgatc tcgctgttag
    16381 gcgattcgct gcggcggccg gttttgccgc cggaggccga ggcccggctg gcggcccagc
    16441 tgcgcgaggc ggagtcggat ctgtcgcacc ggccggggaa cgccgacggc atcatctggg
    16501 tgggacgccg aaccgcttac ctgggccggt acaccgaagc catcgcgatc tactccaccg
    16561 gcctggcccg ccatcccggc gatgcgcggc tctaccgcca ccggggccac cgctacctga
    16621 cgacccgtca gatcgaccgg gccatcgccg acctgctcta cggggcccgg ctggtgcggg
    16681 gccgaccgga tgaggtggag cccgatggcc agccgaacgc gcgcaacatt ccgaccagca
    16741 cactccagtc gaacatctgg tatcacctgg gcctgggcta ctacgtgcgg ggcgatttcc
    16801 ggcgggcgct ggcctcgtat cgagaatgtc tggcggtttc ccgcaacgcc gacatgcagg
    16861 tcgcgacccg gtactggttg tacatgaccc tgcggcggat ggggctctcc ggaccagccc
    16921 gggaggtgtt gcagccggtg acccggtcga tggacatcat cgagaacggc gcctatcacc
    16981 gattgctgtt gctgttcaaa ggcgagctgg ccgcggattc gctgaccggc tccggggaag
    17041 accgggcgct ccaggatgcc acgacggggt acggcctggg caactggcac tacctgaacg
    17101 ggcgacggga tgaagcccgg cgtatctggc ggcgagtgat cgagaccggc ccctgggcca
    17161 gctttgggta tttggcagcg gaagctgaac tgagtagaag caaggactga gtactgagta
    17221 cagtactcag tcctggatgt ttaccggacc gtataccgct ccagaaacac cagatcgtcc
    17281 tcggtggtct ccttcaggta cacggcgccc ttgccgaagc cgatcagctc ccgtccggcg
    17341 gggaggatca cccgccgctt gatcttgccg tctccaccga agatgtcgaa ttgacggggc
    17401 gaccccgccg gcagatgccg ttccacccac gcgtcgccct ccgggctcac ccg
//
LOCUS       DASWKS010000473        14744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_992417, whole genome shotgun sequence.
ACCESSION   DASWKS010000473 DASWKS010000000
VERSION     DASWKS010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_992417"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VGA78_13400"
     CDS             <1..766
                     /locus_tag="VGA78_13400"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6597 domain-containing transcriptional
                     factor"
                     /protein_id="HEX9894919.1"
                     /translation="AIWSLSDRELQPASEPQRVLPDGCSELILNFDDPVSQVLEDGSL
                     FRQPRLLFVGQIPGPFYFTPSGRLELIGIRFRPAGAAGLIREPQSRLVGLSHSLQELT
                     PSLARELAGAAFDAPDPESRVRLIQAALVAHARPRFSPIPMVADRLIRRGGNGSVDEL
                     VSQTGLGARQFERRFLAEVGLRPKLFARICRFQQVFRVLEQQPAHWARVAADCGYYDS
                     SHLIRDFRELSGETPVRLVQESHQLTRLFTRARRMS"
     gene            866..2122
                     /locus_tag="VGA78_13405"
     CDS             866..2122
                     /locus_tag="VGA78_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9894920.1"
                     /translation="MPKRLGVGFIGSGFNARFHMLSWTGIRDGDVLGVWSPTRQHAES
                     TAAYARSLDIGEARAYHSIAEMVADPAIDAIWLCGTNQARIANVEEVADTVRRGKGEL
                     AGIACEKPLARNVSEAMKVLELTSQAGIPHGYLENQLFSPQVERGRELLWARGASLTG
                     RPYLARAAEEHAGPHMPWFWRGELQGGGVLNDMMCHSALVVRHLLTRPGESLSSVKPV
                     RITGHIASLKWTRPEYVNRLKGMMGPEVDYDRKPSEDFASLFIEFETADGYRVLGEAT
                     TSWSFVGAGLRLSAELLGPEYSMRWNSLDSGLLLFFSREVRGREGEDLVEKQNAETGV
                     MPVVADEGVAYGYQAEDRHFVRAFLGKEPLRLTFEDGVEVVKVLMTAYQSAEQGVTLP
                     YPPEGIDRFVPDVARGGERLSRARRT"
     gene            2177..3454
                     /locus_tag="VGA78_13410"
     CDS             2177..3454
                     /locus_tag="VGA78_13410"
                     /inference="COORDINATES: protein motif:HMM:NF015764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9894921.1"
                     /translation="MRSATSRLSLMMFLQYAVWGAWLPLAGRYLSASTAEGGLGFTGG
                     EIGLILGLAGSIGAVASPFIAGQLADRRFSTERFLAFLLAVGGFIKWVTALQTEYQPW
                     LLLSIAYSVVYMPTLALSNSMAFANLPNPAAQFPRVRVWGTIGWIVVSWVFPMIYLQT
                     DLRLQAMPPFLVGPELSGVTSRLADSLRFSAIISWGYAIFCLFLPHTPPRREGVEPLA
                     VAKAFRLLRQPAFAVLVAASLPISIIHQIYFIQTPPFLSYLGLLDSQIGPAMTIGQFS
                     EIAIMAVLGLMLTRLGFRTVITIGALAYFIRYAIWSTTGLPVELMVGSQALHGICYAC
                     FFAAAYIYTDKVASPDVRHSAQTVFGILILGGGPVLGGILSGVLQDRYMTAAGVDFAS
                     LWRVVSLIGLGTAIFFFAFFRERKSADGSPAGG"
     gene            3544..4584
                     /locus_tag="VGA78_13415"
     CDS             3544..4584
                     /locus_tag="VGA78_13415"
                     /inference="COORDINATES: protein motif:HMM:NF016817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HEX9894922.1"
                     /translation="MRGLQWLVGGLILVSSAQGQQAPLTVGTITARPGTRASGFLEVP
                     AGVDAATRIPITVVRGIQAGPVLALIGGTHGSEVAPIVALQRVRAQLNPAELRGTLLI
                     VHVANLPSFLGRTIYYSPVDGKNLNRMYPGKPNGTISERIAHVITTEIIERADFLVDM
                     HAGDGNESLRPYLYWNRLGLDARVDSLAREMALAWGNDHIIVDTTRTRDRANSIYTQN
                     TAHIRGKPALTTENGYLGLPLPEMIERNVQGAFRLMRHLGLLPGAVEKTEAPVWLGRY
                     EVLTSPETGVWHPTVERGQTVSAGAIIGRLTDFFGEAIAVIRAPFDGEVMYVVGTPAM
                     SKGEPIGMVATR"
     gene            complement(4616..6085)
                     /locus_tag="VGA78_13420"
     CDS             complement(4616..6085)
                     /locus_tag="VGA78_13420"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX9894923.1"
                     /translation="MTAVEFGNVTGAGIAAAAPETVAALLEDRIARAGQAAGRLDEPD
                     DPEGLHDFRVAIRRLRSLLRTYRDLTYEAVPRRLRRQLRRIARATNSSRDLQVKLGWL
                     NQQTESLRPRERTGQRWLEERLAEDRDTADREALDLVRTELEGLAQALRHRLEELPET
                     GKQAGLSFARLTALLILELTHELEQHLARVETIENQEEAHDARIAGKRVRYLLEPLVG
                     VLPVAEELVMRLKTLQDLLGEMHDADVAALLIASAMEDAAAEGGHRVAARLRSAATLD
                     SAALRKERRRDPMPGLIALAGRVQARRQAAWDELERDWLPHAGPRLLEPLRAVAEALE
                     RHDPGVEIERKYLLTGLPDRAREETPAEIDQGYLPGERIQERLRRITTRGGTRWFRTV
                     KLGTGLTRQEFEEPTAENIFEALWPLTEGRRVRKRRYRVPDGTMVWEIDEFTDRDLVL
                     AEVELPSEGVVPVPPDWLQPYIVSEVTEDPAYLNITLAH"
     gene            complement(6082..6921)
                     /locus_tag="VGA78_13425"
     CDS             complement(6082..6921)
                     /locus_tag="VGA78_13425"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9894924.1"
                     /translation="MPRDLLPLVRQALGDRYQVEREIGRGGAAVVYLARSQEGIQVAL
                     KVLRPELAVTVAAQRFLQEIRFISRLSHPNIGSLIDSGERDWLIFYVMPYWEGPSLKQ
                     YLTKYHRLQVADVVRLAHDLLEALAHAHAENIVHRDVKPDNVILSPGGAILLDFGIAR
                     AIALSGQTNLTRSGIAIGTSAYMSPEQITALRELDHRSDIYSLGCLLFEAITGRGPFA
                     HPNEAVVLYRHLNEPAPSLRSMAPEAPAALDAAVARALSKRPEDRWPSARAMLIALKG
                     GSA"
     gene            complement(6990..9740)
                     /locus_tag="VGA78_13430"
     CDS             complement(6990..9740)
                     /locus_tag="VGA78_13430"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9894925.1"
                     /translation="MSRIRLLRTAAIGCAMLALAQGGSAQAAARVRQAEPDRGVHRSH
                     DRPSPSLTAVARTTPIQLDGRLDEESWRNAPPGTGFTQQRPEDGKPATQQTEIRILFD
                     DEAIYVGARMFDTKGSKGIRTFLVRRDQSADADMLELMFDTFHDHVGRTIFGVNPSGV
                     KSDAGVAASYADIAWDAVWDVATAIDSLGWVAEFRIPLSQLRFSSDAEQTWGLQVWRT
                     ASRLNEISMWSYWGVTESGGPQRFGHVEGLQLAGRQRRAEVLPYVVGQLNRLRPGPAS
                     DPFYDASSSTARFGADVKYLLTNNLTLDATINPDFGQVEVDPAVVNLSAFETFFEERR
                     PFFVSGGGSFSFGSFSCFFCSNVSSLGLFYSRRIGRFPQGDLPEATDYAEVPDATSIA
                     GAAKVTGRTKSGWTIGVLDALTARELARFDADGSQDGQQVEPRTNYFVGRVQKDLRDG
                     QATIGMIATSVKRDLDDSLLAGKLSSHAEALGLDWNWTWKDRTYSFMGSAALSNVAGD
                     SAALLRIQQSSARYFQRPDREHGSNGLFTNRYDPSLTRMGGYGMYARLGKNSGKWLWE
                     TAVNLRSPGFEVNDMAFLTRSDYVWMSANLLRQFSKPTSWYRSAAVIAGSQQQFNYDG
                     DRTELQFHFWGRLEFLNYWNLNAFHLRRPTVFDDRALRGGPTVQRPSNEFSSIYFSTD
                     SRKAITFDAQVGTGSNTEGSRGYEIYTGVLLRPMPNIQFSVRPAFARASSTQQYVTAI
                     DDPTATAFHGRRYVLASLEQDDLSFNTRVNVTFTPTLTLEVFAQPLFSSVDYSQFKEF
                     DAPRTVEKSVYGVDRGSIAEMRNAENVVTGYTIDPDGAGGAAQFQIDNPDFSFRSLRG
                     NAVLRWEYRPGSTVFLVWTQSRSHDDPFESNPRFSTSMDALRHAKPDNIFLIKFNYWL
                     SF"
     gene            complement(10149..11186)
                     /locus_tag="VGA78_13435"
     CDS             complement(10149..11186)
                     /locus_tag="VGA78_13435"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894926.1"
                     /translation="MKPLRVLALMHPQLVPPDSLAGHDEKEINVWKTEFDVVSTLRKS
                     GHEVQPLGVQDELRPIREAVESWKPDVVFNLLEEFHGETAYDQNVASYLELLRVPYTG
                     CNPRGLIIARGKELAKKLVAFHRIRTPAFAVVARGRAVRRPARLGFPLIVKSANEHAS
                     VGIAQASVVDSDEKLQERVKFVHERVMSDALVEQYVEGRELYVSVLGNDRLTVLPVWE
                     LGFGTMPESATPIATAKVKHDPEYQEKWGITEGPAKDLPVTVTGSIERVAKRIYRTLE
                     LDGYARLDFRLSAAGELFFLEANPNPEIARVEEFAKSAKHAGIDYPDLLQRILRLGIQ
                     RSGGNTGSIGE"
     gene            complement(11183..12208)
                     /locus_tag="VGA78_13440"
     CDS             complement(11183..12208)
                     /locus_tag="VGA78_13440"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEX9894927.1"
                     /translation="MPRRYPWARWPATRLLQLRLSRLGLTLEGTWLDRCVERLYAELD
                     AKGIRLRPHVWLSDEWFAPSTAPGFAIPFYLSHPRLMRLERSQIFDVEGGSLAECMRI
                     MRHETGHAIQHAYLLNRRRRWQTLFGKSSTKYPRWYRPNPASKRYVQHLRLWYAQAHP
                     DEDFAETFAVWLRPRSDWKKRYAGWPALQKLEYVDELMRDVGDAKPIVSSRQQVDPLR
                     SIRKTLAQHYEARRKLYTIEYPETYDRDLHRIFSSEPEQKSALAASTFLRKNRRKIRR
                     MVARWTGEYQLTLDHVLEQMIGRCRALRLRAVGNERQLRSDFAVLLTVHSMHSLYSQA
                     RRSWIPL"
     gene            12457..14331
                     /locus_tag="VGA78_13445"
     CDS             12457..14331
                     /locus_tag="VGA78_13445"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9894928.1"
                     /translation="MRPARATIVAGTTLQLAATARDAGGREVAGKPATWFAVPFDVAS
                     IDSNGLFRGHRQGRAQVFAVIEGKTSIAIIEVEPKAVATIDLAPAQAEIVTDGTTLLS
                     AVARTEDKEPLAGAVFSFRSSDERIATVDQSGVVTGRREGSVILVATTGSARAETRLT
                     VVPNRVAHLSLTGPAQGRTGDVLKFHVTAEDRRNLPVPNPPVRWSVSGAGSSIDPDGG
                     FVAEQPGTYLVTASAGAVAGTHAVRVTRRTHARRLEQVSHLGFGDLQAGEAWAIGDVA
                     YVSTLADRVYSFDIRDPANPVKVDSIVVDARVVNDISTTADGKIGVMTREGASSRKNG
                     LVFLDLSDPLHPKVLSEFTETLTGGVHSAFIDGHYVYATSDATGSLRIISFENPRQPR
                     EVATWAVSEGNLGRSERLGDPRTAGRTLHDVQVKEGLAYLAYWRHGLVILDVGNGMKG
                     GSPERPQFVSQLVYNVADYYPPEMIAGTHAVFRYRNYVFLGDEVFPPVFDLQSKTRIK
                     SLGRVHVVDVSDIERPRKVADYNVQDMGSHNMWVEDDVMYIGYYEGGLRAVDVSGELR
                     GDLMAQGREIGAVWTGSATGFRPNLPMAWGAQPHKGFVFTSDINSGLWVARLTQVPTP
                     "
     gene            14497..>14744
                     /locus_tag="VGA78_13450"
     CDS             14497..>14744
                     /locus_tag="VGA78_13450"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9894929.1"
                     /translation="MVIETISPGLHVISGYANGNILVIEGSTELLLVDAQSDRRVGLA
                     DSALRTVTRKPVRQVIFTHYHDDHTLGMSHWRKGGASAV"
BASE COUNT         2435 a         4875 c         4816 g         2618 t
ORIGIN      
        1 agcgatctgg tcgctgtcgg atcgagagct tcagccggct tccgagccgc agcgggtgct
       61 tccggatgga tgcagcgagc tgatcctcaa ctttgacgac ccggtctctc aggtgctcga
      121 ggatggcagc ctgttccggc agccccgcct gctgttcgtg gggcagatcc ccggcccgtt
      181 ctacttcaca ccctctggcc gcctggaatt gatcggcatc cgcttccgtc ccgccggtgc
      241 cgccggcctc atccgggagc cgcaatcccg gctggtggga ctgagtcatt cattgcagga
      301 gctgactccg tcgctggcac gcgagttggc gggggctgcg ttcgatgctc ccgatccgga
      361 gagccgggtt cgcctgattc aggccgcctt ggtagcccac gcccggcccc ggttctcgcc
      421 catcccgatg gtagccgatc gcctcattcg gcgaggcggg aacggctcgg tggacgagct
      481 ggtgagccag accggtctcg gggcccggca gttcgaacgc cggttcctgg cggaagtagg
      541 tcttcggcct aaactgttcg cgcggatctg ccggtttcag caggtcttcc gcgtcctgga
      601 gcaacagcct gcccattggg ctcgggtggc ggcggattgc ggctactacg actcgtccca
      661 cctgatccgc gattttcgcg agctctcggg tgaaaccccg gtgcggttgg tgcaggagtc
      721 gcatcagctc acccggctgt tcacccgggc ccggcggatg tcctagccga ggtccacacc
      781 tcgctggcgc tcgggctcac ccggccggta tcgttcacgg gttcgttggg ccaacccgtc
      841 actcccacga aagccactgc gtcccatgcc caagcgtctc ggcgtcggct tcatcggcag
      901 cggcttcaac gcccgcttcc atatgctctc ctggaccggc atccgcgacg gcgatgtcct
      961 gggcgtctgg agtcccaccc ggcagcacgc cgagtcgacc gcggcgtacg cccggtcgct
     1021 cgacatcggg gaggcccgag cctatcactc gatcgccgag atggtggccg atccggcgat
     1081 cgacgccatc tggctctgtg ggaccaacca ggcccggatc gccaacgtcg aggaagtggc
     1141 cgatacggtc cggcggggca agggcgagct cgccgggatc gcgtgcgaaa agccgctggc
     1201 gcgcaacgta tccgaggcca tgaaggtcct ggagctgacc tcccaggcgg gaatcccgca
     1261 cggctatctc gagaatcagc tcttctcgcc ccaggtggag cggggccgcg agctgctctg
     1321 ggcccgcggg gcatccctca ccggccggcc ctacctcgcc cgcgccgcgg aggagcatgc
     1381 cggaccccac atgccctggt tctggcgggg cgagctgcag ggcggaggag tcctcaacga
     1441 catgatgtgc cactccgccc tggtggtccg gcatctactg acccgcccgg gcgagtccct
     1501 gtcgagcgtg aagccggtcc gcatcaccgg acacatcgcc agcctcaagt ggactcgccc
     1561 cgagtatgtg aaccgcctca agggcatgat ggggccggag gtcgattacg accgcaagcc
     1621 gtccgaggat tttgccagcc tgttcatcga attcgaaacc gcggatgggt accgcgtgct
     1681 gggcgaagcc actacgtcat ggagcttcgt gggtgcgggg ctccgtcttt cggccgaact
     1741 cctgggaccc gaatactcga tgaggtggaa ttcgctcgac agcggactgc tcctgttctt
     1801 cagccgggaa gtgcgcggca gggaagggga ggacctggtc gagaagcaga acgccgagac
     1861 cggtgtcatg ccggtggtgg cggatgaagg cgttgcctac gggtatcagg ccgaggaccg
     1921 tcatttcgtc cgggccttcc tgggaaaaga gccgctccgc ctgacgttcg aggacggggt
     1981 cgaggtggtg aaggtgttga tgaccgccta ccagagcgcg gagcagggtg tcacgctgcc
     2041 gtatccgccg gaggggatcg accggttcgt gcctgacgtg gcgcggggag gggagcgcct
     2101 gtcgcgagcc cggcgaacct gagcgaaccg tctcgcgact cggaacccgc gactggtgtc
     2161 actataagga gagctgatgc gctccgcgac ctcccgtctg tccctgatga tgttcctgca
     2221 gtacgcggta tggggagcct ggctgcccct ggcgggacgc tacctctccg ccagcaccgc
     2281 cgagggcggg ctgggattca ccgggggcga aatcggcctg atcctcggtc tggcgggttc
     2341 gatcggggcg gtggcctcac ccttcatcgc gggtcagctg gccgaccgcc gtttcagcac
     2401 cgagcggttt ctggcctttc tgctggcggt tggtggattc atcaagtggg tgacggcgct
     2461 gcaaaccgag taccagccgt ggctcctgct ctccatcgct tacagcgtgg tctacatgcc
     2521 gacgctggcc ctctccaact cgatggcgtt cgccaatctg cccaatcccg ccgcccagtt
     2581 cccccgggtc cgggtctggg gcaccatcgg gtggatcgtg gtcagctggg tcttccctat
     2641 gatctacctc cagaccgacc tgcgcctgca ggccatgccg ccgttcctgg tcggtccgga
     2701 gctttccggc gtcacctcca gattggcgga ctcgctgcgt ttctcggcca tcatcagctg
     2761 gggttacgcc atcttctgcc tgttcctgcc gcacaccccg ccgcggcgcg aaggggtcga
     2821 gcccctggcg gtggccaaag ccttccgact gctgcgccag ccggcgttcg cggtattggt
     2881 ggccgccagc ctccccatct cgatcatcca tcagatctat ttcatccaga caccaccctt
     2941 cttgtcgtac ctgggtctgc tcgacagtca gatcggcccg gccatgacca tcggtcagtt
     3001 cagcgagatc gctatcatgg cggtgctggg gttgatgctc acccggctcg gcttccggac
     3061 cgtgatcacc atcggcgccc tggcctactt catccgttat gccatctgga gcaccaccgg
     3121 cctgccggtg gaattgatgg tagggagcca ggcgctgcac gggatctgct atgcgtgctt
     3181 cttcgccgca gcgtacatct acaccgacaa agtggcctcg cccgacgtgc gccactcggc
     3241 gcaaaccgtg ttcggcattc tgattctagg tggtgggccg gtgctgggcg gcatcctgtc
     3301 cggcgtgctg caggaccggt acatgaccgc cgccggggtg gacttcgcct ccctctggcg
     3361 ggtggtctcg ttgatcgggc tcgggaccgc gatcttcttc ttcgccttct tcagggagcg
     3421 gaagagcgca gatgggtcgc cggcgggtgg ctgacatgac ggtgggcact caggatgacg
     3481 gtaggtactc aggatgacga cgggcacgtc aggttcggct gatggcgtca aaggaggttg
     3541 acaatgcgcg gtctacaatg gctggtcggc ggcctgatcc tggtcagctc ggcccagggg
     3601 caacaggcgc cgctcaccgt cggcacgatc accgctcgtc ccgggacccg ggcttccggt
     3661 ttcctggaag taccggccgg ggttgatgcg gccacccgca ttccgatcac cgtggtccgt
     3721 ggtattcagg cggggccggt gctggccttg atcggcggca cccacggcag cgaagtggct
     3781 cccattgtgg ccctgcaacg ggtccgggcc cagctcaatc cggcggagct gcgcggcacg
     3841 cttctcatcg tgcatgtggc caacctgccc agttttctgg gacgaaccat ctactacagt
     3901 ccggtggacg ggaagaacct gaaccggatg taccccggca agccgaatgg gacgataagc
     3961 gaacggatcg cccacgtcat caccaccgag atcatcgagc gggccgattt cctggtcgat
     4021 atgcacgccg gcgacggcaa cgaatcgttg cggccctatc tctactggaa ccgcctcggg
     4081 ctcgatgccc gggtcgactc gctggcccgg gagatggcac tggcgtgggg caatgatcac
     4141 atcatcgtgg acaccacccg cacccgggat cgggccaact ccatctatac ccagaacacc
     4201 gcccacatcc gcggcaagcc ggcgctcacc accgagaacg gttacctggg attacccctg
     4261 ccggagatga tcgagcgcaa cgtgcagggc gccttccgcc tgatgcgcca tctcgggctg
     4321 ttgcccggcg cagtcgagaa aaccgaagcc ccggtctggt tgggccgcta cgaggtgctg
     4381 accagtcccg agaccggagt ctggcacccg accgtggagc gaggacagac cgtgtcggcc
     4441 ggagccatca tcggccgcct caccgatttc ttcggtgaag cgatcgccgt gatccgagcc
     4501 cccttcgatg gcgaggtgat gtacgtggtc gggactccgg cgatgagtaa gggagagccc
     4561 attgggatgg tagccacgcg gtaactgacc gtcggtccgt cggtctttcc gtccgtcagt
     4621 gtgccagcgt gatgttgagg taggcggggt cttcggtcac ctcagacacg atgtagggct
     4681 gcagccagtc gggcggaacc gggaccacgc cttccgaggg gagctcgacc tccgccagca
     4741 ccaggtcgcg gtcggtgaac tcgtcgatct cccagaccat ggttccgtcc ggcacccgat
     4801 accgccgctt gcgaacccgc cggccctcag tcagcggcca gagcgcctcg aagatgttct
     4861 ccgcggtggg ctcttcgaat tcctggcggg tgagcccggt ccccagcttc acggtgcgga
     4921 accagcgggt gccaccccgg gtggtgatcc ggcgcaagcg ctcctgaatc cgctcacccg
     4981 ggagataccc ctgatcgatc tccgccgggg tttcctcccg ggctcgatcc ggaaggccgg
     5041 tgagcaggta cttccgttcg atctctactc ccggatcatg ccgctccagc gcctcggcca
     5101 ctgccctgag cggctccagc agccgcgggc ccgcgtgggg cagccagtca cgctccagct
     5161 cgtcccatgc cgcttgacgc ctggcctgca ctcgacccgc gagcgcaatc agccccggca
     5221 tgggatcgcg gcgccgttcc tttctgagcg cggctgaatc cagggtagcg gcgctgcgca
     5281 gccgcgcagc aacccggtgc ccaccctcgg cggcggcgtc ttccatggcc gaggcgatga
     5341 gcagcgcggc aacatccgca tcgtgcattt ctcccagcag gtcctgcagc gtcttgagcc
     5401 gcatgaccag ttcctccgcc acgggcaaca cccccaccag cggctcgagc aggtaacgca
     5461 ctcgcttgcc cgcgatccgg gcatcgtggg cttcttcctg attctcgatg gtctccaccc
     5521 gggccaggtg ctgctccagc tcgtgggtga gctcgaggat cagcaaggca gtgaggcggg
     5581 cgaacgaaag gccggcctgc tttccggttt ccggcagctc ctccaggcga tggcgcaggg
     5641 cttgagccag cccttccaac tcggttcgaa ccaggtccag cgcttcccgg tcggcggtat
     5701 cgcggtcctc ggccaaccgc tcctccagcc agcgctgtcc ggtccgttcc cgcgggcgga
     5761 gggactccgt ctgctggttc aaccagccga gcttgacctg cagatcgcgg ctggaattgg
     5821 tggcgcgggc gatccgccgc agctgccggc ggagccgccg gggaacagcc tcataggtga
     5881 gatcccggta ggtccggagc agggaacgga gccggcgaat cgctacccgg aagtcgtgca
     5941 gtccttcggg atcgtccggc tcgtccagcc ggccggcggc ctgccctgcc cgcgcgatcc
     6001 ggtcctccag cagcgcggcg acggtctccg gggccgccgc cgcgattccc gcgccggtga
     6061 cgttgccaaa ttcgacggcg gtcacgcgga cccccctttc agggcgatga gcatggcgcg
     6121 ggcactgggc cagcgatcct cgggccgctt ggacagcgcg cgtgcgaccg cggcgtcgag
     6181 ggccgccggg gcctccgggg ccatggagcg gagtgaaggc gccggctcgt tgagatggcg
     6241 atagagcacc acagcctcgt tggggtgggc gaaaggaccg cggccggtga tcgcttcgaa
     6301 caggaggcag cccagcgagt agatgtcgct gcgatggtcc agctcgcgca acgcggtgat
     6361 ctgctccgga ctcatgtagg ccgaagtccc gattgcgata ccgctgcggg taagattggt
     6421 ctgccccgac agcgcgatcg cccgggcaat gccgaagtcc agcaggatcg ccccgccggg
     6481 cgacagaatg acgttgtcgg gtttgacgtc tcgatggacg atgttctcgg cgtgggcgtg
     6541 agccagggcc tcgagcagat cgtgcgccag acggaccaca tcggccacct gcaagcggtg
     6601 gtatttcgtc aggtactgtt tcagcgaggg tccttcccag tagggcatca cgtagaagat
     6661 cagccagtct cgctcgccgc tgtcgatcaa cgacccgatg ttggggtgcg acagccggga
     6721 gatgaagcgg atctcctgca ggaagcgctg ggccgcgacg gtcacggcga gttccggccg
     6781 gagcaccttg agggcgacct ggatgccctc ctggctccgg gccaggtaca ccaccgcggc
     6841 tccgccccgc ccgatctcac gctcgacctg gtaccggtcg ccgagagcct ggcggaccag
     6901 agggagcagg tcgcgaggca tggcacaaaa tactacaggt cgaaggcagt cgaagggggt
     6961 cgaccgcctt cgaccctctt cgaccgcttc tagaaggaca gccagtaatt gaacttgatg
     7021 aggaagatat tgtccggctt ggcgtggcgc agcgcgtcca tgctggtgct gaatcgggga
     7081 ttgctctcga agggatcgtc gtgggagcgc gattgggtcc acaccaggaa cacggtcgag
     7141 ccgggccggt attcccatcg cagcaccgca ttgccccgga gcgaccggaa actgaagtcg
     7201 gggttgtcga tctggaactg ggccgcgcca ccggccccgt ccgggtcgat ggtgtagccg
     7261 gtcactacgt tctcggcgtt ccgcatttcc gcgatcgagc cccggtccac gccgtacacg
     7321 cttttctcca ccgtccgggg tgcatcgaac tccttgaatt ggctgtaatc caccgacgag
     7381 aaaagcggct gcgcgaagac ttcgagcgtg agggtgggag tgaaggtgac gttcacccgg
     7441 gtgttgaacg acaggtcgtc ttgctccagg ctggccagga cgtagcgccg gccgtggaac
     7501 gccgtggccg tcgggtcgtc aatcgcggtc acgtattgct gggtcgagga cgcccgggcg
     7561 aacgcgggcc ggacgctgaa ctggatattg ggcatgggcc gcagcagcac gccggtgtaa
     7621 atctcatacc cccgcgaccc ctcggtgttg gatccggtgc cgacctgggc gtcgaaggtg
     7681 atcgccttgc ggctgtcggt cgaaaaatag attgaggaga actcgttcga gggccgctgg
     7741 acggtcggcc cgccccgcag agcccggtcg tcgaacaccg tgggccgccg caggtggaag
     7801 gcgttcaggt tccagtaatt caggaactcc aaccggcccc agaagtgaaa ctggagttcg
     7861 gtgcggtcgc cgtcgtagtt gaactgctgc tgactgcccg cgatgacggc ggcggagcga
     7921 taccacgaag tcggcttgga gaactgccgc aggagattag cgctcatcca cacgtagtcc
     7981 gaccgggtga ggaacgccat atcgttcacc tcgaagccgg ggctccgcag gttaaccgcc
     8041 gtctcccaaa gccatttccc cgagttcttg cccagccggg cgtacatccc gtacccgccc
     8101 atccgggtaa gcgaggggtc gtaccggttg gtgaagagcc cgttggatcc gtgctcgcga
     8161 tcgggccgct ggaaataccg ggcgctggat tgctggatcc ggagcagcgc cgctgaatcg
     8221 ccggccacgt tggacaatgc cgcgctgccc atgaacgagt aggtgcggtc cttccaggtc
     8281 cagttccagt cgagacccag cgcctcggca tgagaggaga gcttgccggc gagcaacgaa
     8341 tcgtccaaat cgcgcttcac ggatgtcgcg atcatgccga tcgtcgcctg gccgtctcgg
     8401 agatccttct gaacccgccc cacgaagtag ttggtgcggg gttcgacctg ctgcccgtcc
     8461 tggctgccgt cggcatcgaa gcgggccagt tcccttgccg tcagcgcgtc gagcaccccg
     8521 atggtccatc cgctcttggt gcgaccggtc accttggcgg cgccggcgat cgacgtggcg
     8581 tccgggacct cggcatagtc ggtcgcttcc ggcaggtcgc cctgcggaaa ccggccgatc
     8641 cggcgggaat agaacagacc caggctggag acgttgctgc agaaaaagca gctgaacgag
     8701 ccgaacgaaa aacttccccc gcccgacacg aagaagggcc gccgttcttc gaaaaaggtc
     8761 tcgaacgccg agaggttcac caccgccgga tcgacctcaa cctgaccgaa atcggggttg
     8821 atggtcgcgt ccaaggtcag attgttggtc agcagatact tgacgtcggc tccgaaccgg
     8881 gcggtactgc tgctggcgtc gtaaaacgga tcgctggcag ggccgggccg cagccggtta
     8941 agctggccca ccacgtacgg caggacttca gcccggcgct ggcggccggc cagctgcaat
     9001 ccctccacat gcccgaaccg ctgcggccct cccgactcgg tgactcccca gtacgaccac
     9061 atcgagatct cgttcagccg gctggcggtc ctccacactt gcagccccca ggtctgttcg
     9121 gcgtcgctcg agaaccgcag ctgggaaagg gggatccgga actccgccac ccagcccagc
     9181 gagtcgatgg cggttgccac atcccacacc gcatcccagg caatgtcggc ataggaagcg
     9241 gcgacccccg catcggattt cacgccggag ggattgaccc cgaaaatggt gcgtcccacg
     9301 tggtcgtgaa acgtatcgaa catcagctcc agcatgtcgg catccgcgct ctggtcccgc
     9361 cgcaccagaa aggtgcgaat ccccttcgag cccttggtgt cgaacatgcg cgcgcccacg
     9421 tagatcgctt cgtcgtcgaa gagaatccgg atctcggtct gctgggtggc gggtttgccg
     9481 tcctcgggtc gctgctgggt gaatccggtc cccggcgggg cattgcgcca cgactcctcg
     9541 tccaaccggc cgtccagctg aatcggcgtg gtgcgggcga ccgcggtcaa cgacgggctg
     9601 gggcgatcat gggaacgatg gacccctcgg tctggctcgg cttgccggac ccgcgccgcg
     9661 gcctgggccg agccgccctg cgccagggcg agcatggcgc agccgatggc agcggtccga
     9721 agcaagcgga tgcgagacat gcgaagtcct ctggagccgc ggggttggga actcgttaga
     9781 tgcctttcgg ggagaaagcg ttggctgatt cgcgttccag tactggaacg ggggcaggga
     9841 gcggggagcg gggagcaggg agcagggagc agggagcggg gagcagggag caggcagtac
     9901 tcgtcccttt cggtccaact caacatcacc gagggatatg gcctcaagac gcctcggctg
     9961 gaggtcaaac cctacggtat cccctatggg tcgtgcctgg agtcggccga cgttctcgaa
    10021 ttcttggttg aactgggacg agagcgctgc tacaccgacc aatgcgacct gtcgtgagtg
    10081 ctgccgtgtg ctccctgctc cctgctccct tctcccttct cccctccctg ctccctgctg
    10141 cctgctgcct attccccaat gctccccgta tttccgccag accgttggat ccccagtctc
    10201 aggattcgct gtaacagatc cggatagtct attccggcgt gtttggccga cttcgcgaat
    10261 tcctcgaccc gggcgatctc cggattggga ttggcttcca gaaagaacag ctcgcccgcg
    10321 gccgacaggc ggaagtcgag ccgggcatag ccgtccagct ccagggtacg gtaaatccgc
    10381 ttcgccaccc gctcgatgct gccggtcacg gtcaccggca ggtctttggc cggcccttcc
    10441 gtgatgcccc acttttcctg gtattcggga tcgtgcttca ccttggcggt cgcgatcggc
    10501 gtggccgact cgggcatggt cccgaacccc aattcccaga ccggcagtac cgtcaaccgg
    10561 tcgttgccga ggacgctcac atacagctcc cggccctcga catattgctc gaccagggca
    10621 tcgctcatca cccgttcgtg cacgaacttc acccgctcct gcagcttctc gtccgaatcc
    10681 accaccgacg cctgcgcgat gccgaccgag gcgtgctcgt tggcgctttt cacgatgagg
    10741 gggaaaccga ggcgggccgg tcgccgcacc gcccggcccc gagccaccac cgcgaaagcc
    10801 ggcgtgcgga tacggtggaa ggccaccagc ttcttggcca gctccttccc tcgcgcgatg
    10861 atgagtcccc gcgggttgca gccggtgtag ggcacccgga gcagctccag gtagctggcc
    10921 acgttctggt cgtacgccgt ctccccgtgg aattcctcca gcagattgaa gaccacgtcc
    10981 ggtttccagc tttccaccgc ctcgcggatg ggccggagct cgtcctgcac ccccagcggc
    11041 tgcacctcgt ggccggactt gcgcagggtc gagaccacgt cgaactcggt cttccagacg
    11101 ttgatctcct tctcgtcgtg gccggccaac gaatccggcg gcaccagctg cgggtgcatc
    11161 agcgccagca cgcggagcgg cttcatagcg ggatccagct tcggcgggcc tgactgtaga
    11221 gcgaatgcat gctgtgcacc gtgagcagca cggcgaaatc actgcgcagc tgccgctcgt
    11281 ttcccaccgc ccggagccgg agtgcgcggc agcggccgat catctgctcc aggacgtgat
    11341 ccagtgtcag ctggtactca ccggtccagc gggccaccat gcggcggatc ttgcgccggt
    11401 tcttgcgcag aaaggtggag gcagccagcg cgctcttctg ctcgggctcg ctgctgaaga
    11461 tccggtgcag gtcccggtcg taggtctcgg ggtactcgat cgtgtagagc ttgcgacggg
    11521 cttcgtagtg ctgggccagg gtcttccgaa tcgaccggag tggatccacc tgctgccggc
    11581 tgctcacgat cggcttggcg tcgcccacgt cccgcatcag ttcatccacg tattccagct
    11641 tctgcagcgc cggccacccc gcatagcgct tcttccagtc ggagcggggc cgcagccaca
    11701 cggcgaaggt ctcggcgaag tcctcgtcgg gatgggcctg cgcgtaccat aaccgcagat
    11761 gctggacgta gcgcttgctg gccggattgg gccggtacca gcgggggtac ttggtcgatg
    11821 atttgccgaa gagagtctgc catcggcggc ggcggttgag caggtaggca tgctggatgg
    11881 catgcccggt ttcgtgccgc atgatccgca tgcactcggc caggctgcct ccttccacgt
    11941 cgaagatctg gcttcgctcc agccgcatca ggcgcgggtg ggacagatag aatggaatcg
    12001 cgaaccccgg cgcggtcgag ggggcaaacc actcgtccga gagccagacg tggggccgga
    12061 gccggatgcc cttggcgtcg agctccgcat acagccgctc cacgcaacgg tccagccagg
    12121 tcccctcgag agtgagaccc aggcgtgaca gccgaagttg gagcagacgc gtcgctggcc
    12181 aacgagccca gggataccgc cgtggcatga acgaatatcg gacagcggcg gcgtggcagg
    12241 caagtggaag gtcgagttaa ttgcggttcc aatgctccaa cgagagcggt cacaatgaat
    12301 gcggaatgcc caatgcccaa tgcccatggc agaagtgccc gatccctaca ccttcatccc
    12361 aaccctcttc attgggcact gggcattggg cactctgcat tcattctctc actgaccctt
    12421 cccacctcgg ccctcgccca gacaacgagt gtcgaggtgc gccccgcccg ggcgaccatc
    12481 gttgccggca ccacccttca gctggccgcg acagcccggg acgccggcgg ccgggaggtc
    12541 gcgggcaagc cggccacctg gttcgcggtg cccttcgatg tcgcgagcat cgactccaac
    12601 ggcctgttcc ggggtcaccg gcagggacgg gcccaggtct tcgccgtgat cgagggcaag
    12661 accagcatcg cgatcatcga ggtcgagccc aaggctgtcg ccaccatcga cctggcgccg
    12721 gcccaggccg agatcgtcac cgacgggacc acgctgctca gcgccgtggc tcgcaccgaa
    12781 gacaaagagc cgctggccgg tgccgtcttc tctttccgtt ccagcgatga acgcatcgcc
    12841 accgtcgatc agagcggtgt ggtcaccggc cggcgcgagg gctccgtcat tctggtggcg
    12901 actaccggat cggcccgggc cgaaacccgc ttgaccgtgg taccgaaccg ggtggcgcac
    12961 ctgtcgctga ccggtcccgc gcagggccgc accggcgacg tgctgaagtt ccacgtcacc
    13021 gcggaggacc ggcgcaatct cccggtaccc aatccaccgg tgcggtggag cgtctccggt
    13081 gccgggtcgt cgattgatcc cgacggcggt ttcgtggcgg agcagcctgg cacctatctg
    13141 gtgaccgcgt cggccggcgc ggtggccgga acccacgccg tacgggtaac ccgccgcacc
    13201 cacgcacgaa ggctggaaca ggtgagccac ctgggcttcg gcgatttgca ggccggggaa
    13261 gcctgggcca tcggcgacgt cgcctacgtg tccaccctgg ccgatcgggt ctactccttc
    13321 gacatccgcg acccggccaa cccggtgaag gtggactcga tcgtggtcga tgccagggtg
    13381 gtcaacgaca tctccaccac ggcggacggc aagatcggcg tcatgacccg cgagggcgcc
    13441 tcgtcccgaa agaacggcct ggtgtttctc gacctgagcg acccgctcca tcccaaggtg
    13501 ctatcggaat tcaccgagac cctcaccggg ggagtacact ccgctttcat cgacgggcac
    13561 tacgtctacg ctaccagtga cgccaccggc tcgcttcgga tcatcagctt cgagaacccg
    13621 cgccaaccgc gggaggtggc cacctgggcc gtttcggaag ggaacctggg ccgctccgag
    13681 cggctgggcg atccccggac tgccggccgc accctgcacg acgtccaggt gaaggaagga
    13741 ttggcttacc tggcctactg gcgtcacggt ctcgtcattc tcgacgtcgg gaacggcatg
    13801 aagggcggca gccccgagcg gccccagttc gtgagccagc tggtgtacaa cgtggcggac
    13861 tattacccgc ccgagatgat cgcgggcacg cacgcggtgt tccgctatcg aaactatgtg
    13921 ttcctgggcg acgaagtgtt tccaccggtc ttcgatcttc agagcaagac ccgcatcaag
    13981 agcctggggc gggtgcacgt ggtcgatgtg agcgacatcg agcggccccg gaaggtggcc
    14041 gactacaacg tgcaggacat gggcagccac aacatgtggg tcgaagacga tgtgatgtac
    14101 atcgggtact acgagggcgg gctccgcgcc gtggacgtga gcggtgagct gcgaggcgat
    14161 ctgatggccc agggacgcga gatcggcgcg gtgtggaccg gatcagccac cggcttccga
    14221 cccaatctgc cgatggcttg gggcgcacaa ccgcacaaag gattcgtctt taccagtgac
    14281 atcaatagcg gactgtgggt tgcacgattg actcaggttc caactccatg aggtgggagt
    14341 aaatgcccag tgcccaatgc ccagcccaat gcccatagca gaatgaaccg cgctgtcagc
    14401 ggctttccac cccttctgca ttgggcattg ggcattgggc acgctgcatt cattctgacc
    14461 atactccttc cttcctccgc cctcgcgcag ttgaagatgg tgatcgagac catctctccc
    14521 ggtcttcacg tcatctccgg ttacgccaac ggcaacatcc tggtgatcga aggctccacc
    14581 gagctgctgc tggtcgatgc ccagtccgac cgccgggtag gcctggccga ctcggcgctt
    14641 cgcaccgtca cccggaaacc ggtgcgccag gtcatcttca cccactatca cgacgaccat
    14701 acgctgggaa tgtcacattg gcgcaagggg ggagcctcgg cggt
//
LOCUS       DASWKS010000474         4499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1745350, whole genome shotgun sequence.
ACCESSION   DASWKS010000474 DASWKS010000000
VERSION     DASWKS010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4499
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1745350"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1883
                     /locus_tag="VGA78_13455"
     CDS             <1..1883
                     /locus_tag="VGA78_13455"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9894930.1"
                     /translation="TETVLEATRLVGRPIFFSMAIIILAFVPVFALTGQEGKLFHPLA
                     FTKTFSMVGATLLSVTLVPVLCSLLIGGKIREEEHNPVMRPLMWVYRPVLGWVLRHRA
                     LTLGGAVLIFVGAVALIPRIGKEFMPPLNEGDLMFMPVTDPAISLPQAIEITRKQNAA
                     IQQAPEVALVVAKISRAETSTDPAPVNMTETIVSLKPESEWRPGMTREKLIGELDAAT
                     TLPGVSNIWTQPIINRINMLTTGIRSEVGVKIFGNDLKMIEERARVVADVLRKIPGAV
                     DVYPEQVTGAPYLDIRVNREAAARYGITVGAIQDVIETAVGETNLTMTIEGRQRFPVR
                     VRYAPQYRASAGVLASVLVAAPNGTQVPLGQVADIRHVSGPAMISSENGLLVVTVLLN
                     VRGRDVGSFVDEARQVVAQTVTLPQGSYIEWSGQYENQVRAKRRLQIVMPVVLLVIYL
                     LLYLTYRSLLEAAHVLLAVPFALSGGIFLLYALGYNFSVAVWVGFIALFGTAVQTTVV
                     MVIYLEEAVERKRAKAEGYLTRAALLEAVTEGALLRLRPKVMTVSTVVASLLPIMWST
                     STGAEVMQPLATPVLGGMLSSLAHVLLVTPVIFYWLRERELRQAEVQEAVKSRLGKSD
                     RS"
     gene            1934..2350
                     /locus_tag="VGA78_13460"
     CDS             1934..2350
                     /locus_tag="VGA78_13460"
                     /inference="COORDINATES: protein motif:HMM:NF024515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEX9894931.1"
                     /translation="MTRLMISVMLGGLLLLDGLTGMAWSAELQAIQTRKAKDVVMTLL
                     SESGQWTQGKNAFVLEFTSDPTKQPVDVGKVTLNTAMSMPGMAPMVADATLSPDKVPG
                     RYLSTITFPDSGTRQVTITWDGPAGKGSTRFSVPVR"
     gene            2362..3654
                     /locus_tag="VGA78_13465"
     CDS             2362..3654
                     /locus_tag="VGA78_13465"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9894932.1"
                     /translation="MRWLGVLLLTLLLGIAAAAHTAADVHGTAGEFTVDQLVTRALAD
                     NPELHAVRAEVDAARGRLLQAGLRPNPMLDLSGQPSVTGPDNNITVGVTLPLDLNRRK
                     AGRVGVAERELEMKGAQVAEQERQLRAEVRMRAGELLAARRNLRFTEELLEVNRHALG
                     LVQQRVRRGAVPALEENLMLVEVNRLDATRRILESRVEVLRLQLKTLAGLEPDAPLSI
                     RGDLSLPPMRLDREEWLRRARVARPDLLVAQAEVEMARAKIRKEQAEGRWDASVNVGY
                     MRQDFGYGLNGLTMNGELRPITDIFHYVGGGVTVMLPLRNRNQGNIAAAFAETQAAER
                     RTDFVTLTIHQEVAAAFTQHEAAQRSLEIYTRGVREVARQNLEIIRKAYDLGRTSLLD
                     VITEQRRYIEIEMGYTESLKQVYDAVVDIERAGGAPER"
     gene            3757..>4499
                     /locus_tag="VGA78_13470"
     CDS             3757..>4499
                     /locus_tag="VGA78_13470"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9894933.1"
                     /translation="MAIGLIAIGAAGAVLVLRFGNNTPPGLVTAAPTPTSIEAPALAG
                     QNAVEPADEVEVVLSPEAVAQAGIKTAKVDVVESNTSIQVPGTVMANAYREVKVFPIV
                     GGIITKVHVELGASVRRGVPLATLFSAELAEAQTKYLTMKAMLVADHQKLERTKQLVE
                     IGAASRQELEEAVAANASRATEVEAARQRLLQLGLSRKQVASLSSPSQAVSDVVVPAP
                     INGIITGRSANLGQVVGMGEELFVVTDLS"
BASE COUNT          826 a         1357 c         1529 g          787 t
ORIGIN      
        1 tgacggagac ggtgctcgag gcgacacggc tggtggggcg gccgattttc ttctcgatgg
       61 cgatcatcat cctggcgttc gtcccggtgt tcgcgttgac cggccaggag gggaaactct
      121 tccatcccct agctttcacc aagaccttct ccatggtggg agcgacgctg ctctcggtga
      181 cgttggtacc ggtgctctgc agtctcctga tcgggggcaa aatccgggag gaggagcata
      241 acccggtgat gcgtccgctc atgtgggtct accggccggt gctcgggtgg gtcctgcggc
      301 accgcgccct caccctaggg ggagcggtcc tcatcttcgt gggtgccgtc gccctcatcc
      361 cccgtattgg caaagagttc atgccgccgc tgaacgaggg agacctgatg ttcatgccgg
      421 tcaccgaccc ggcgatctcg ctgccccagg ccatcgagat caccaggaag cagaacgcgg
      481 cgatccaaca agcccctgag gtcgccttag tggtcgccaa gatctcgcgt gccgagacct
      541 cgaccgaccc ggcgccggtc aacatgacgg aaaccatcgt gagcctcaag ccagaatccg
      601 aatggcggcc cgggatgaca cgcgaaaagc tcatcggcga gctggatgcg gccaccacac
      661 tgcccggcgt ctccaacatt tggactcagc cgatcatcaa ccgcatcaac atgctgacga
      721 ccggcatccg ctccgaggtc ggggtgaaga tctttggcaa cgatctcaag atgatcgagg
      781 agcgggcgcg cgtcgtcgcc gacgtgctgc ggaagatccc aggggccgtc gatgtctacc
      841 ccgagcaggt cacgggtgcc ccctacctcg acatccgcgt caatcgtgag gccgctgcac
      901 gctatggcat tacggttggt gccattcagg atgtcatcga gaccgcggtg ggagagacca
      961 atctcactat gaccatcgaa gggcgccaac gtttcccggt gcgggtacgg tatgccccgc
     1021 aataccgcgc cagcgccgga gtcctagcga gcgtgctcgt cgcagctccg aacggcaccc
     1081 aggtgccgct cgggcaagtg gcggacatca ggcatgtgtc cggtccggcg atgatttcga
     1141 gcgagaacgg cctgctcgtc gtcaccgtgc tgctgaacgt ccgggggcgc gatgtcggga
     1201 gcttcgtgga tgaggcccgc caggtggtcg cccagacggt cacgctgcct cagggctcgt
     1261 acatcgagtg gagcggccag tatgagaacc aggtgcgcgc caagcgccgg ctgcagatcg
     1321 tcatgcccgt ggtcctgctg gtcatctact tactcttgta tctgacctac cgctcgctcc
     1381 tggaggcggc gcatgtgctc ctggcagtgc cctttgccct gtccggcggg atcttcctgc
     1441 tgtatgccct cggctataac ttttcggtgg cggtctgggt gggcttcatc gcgctcttcg
     1501 gcaccgccgt gcagaccacg gtcgtgatgg tgatctacct ggaggaagcg gtggaacgga
     1561 agcgtgcgaa ggcggaaggg tatctcacgc gggcggcgct cctggaggcg gtgaccgagg
     1621 gggctctcct caggctcagg ccgaaggtca tgacggtctc gacggtggtg gccagcctgc
     1681 tgccgatcat gtggagcacc tccactggag ccgaggtgat gcaaccgctg gcgactccgg
     1741 tcctgggcgg catgctcagc tcactcgccc acgtgctgct ggtgacccct gtcatcttct
     1801 attggctcag ggagcgggag cttcgtcagg cggaagtgca agaagccgtc aagagccgtc
     1861 tagggaagtc cgaccggtca taggtcggcc ggtcaatcca atcaatcgca gcgcgaacag
     1921 aggaggaatg ttgatgaccc gactgatgat cagtgtgatg ctcggcgggc tgctgctcct
     1981 ggatggactg acaggtatgg cgtggagtgc ggagctgcaa gcgatccaga cccgcaaagc
     2041 gaaggacgtg gtgatgaccc tgctcagcga gtccgggcag tggacccagg gcaagaacgc
     2101 gttcgtgctg gaatttacct cagaccccac taaacagccg gttgatgtcg ggaaggtgac
     2161 gctgaacacc gctatgtcga tgccgggtat ggccccgatg gttgccgatg ccaccctctc
     2221 cccggacaag gttcccggtc ggtatctcag cacgatcacc ttcccggaca gtggcacacg
     2281 gcaggtgacc attacctggg acgggccggc aggaaaggga tctactcgct tttctgtccc
     2341 cgtgcgttag gagccgagac catgcgatgg cttggggtgc ttttgcttac cctgctgctg
     2401 ggcatcgccg cggcggctca caccgcggcc gatgtccatg gcacggcggg ggaattcacg
     2461 gttgaccaac tggtcacgcg ggcgcttgcg gacaacccgg agctgcatgc tgtgcgtgca
     2521 gaggtggacg ccgctcgagg gcgcctcctg caggcgggtc tccgcccaaa tcccatgctc
     2581 gacctgagcg gtcagccgag cgtcaccggc ccggataaca acatcacggt gggcgtcacc
     2641 ctgccgctgg atctgaaccg ccggaaagcg gggcgtgtcg gggtcgccga gcgcgagctg
     2701 gagatgaagg gagcccaggt ggctgagcag gagcgtcagc tcagagcgga ggtgcgcatg
     2761 agggccgggg aattgttggc cgcccgacgc aacctccgct tcaccgagga gcttttggag
     2821 gtgaaccgcc atgcgcttgg tctcgtccag cagcgggtcc gccgaggggc cgtgccagcg
     2881 ctcgaagaga acttgatgct cgtcgaagtg aaccgtctcg acgccacccg ccggatcctg
     2941 gagagccggg tggaggttct caggctccag ctgaaaacgt tggccggtct agaaccggat
     3001 gccccgctct cgatcagggg ggacctcagt ctccccccca tgaggctcga ccgcgaggaa
     3061 tggctgcggc gggcgcgcgt ggcacggccg gacctcctgg tcgcccaggc cgaggtcgag
     3121 atggcgcggg cgaagatccg gaaggagcag gcggaaggcc ggtgggacgc gagtgtcaac
     3181 gtgggctata tgcgccaaga cttcggttac ggcctcaatg ggctcacgat gaacggcgag
     3241 ctccgaccca tcaccgacat ctttcactat gtcggtggcg gggtgacggt catgctgcca
     3301 ctccgaaacc gcaaccaggg gaatatcgca gcggccttcg ctgaaactca ggctgccgaa
     3361 cgccggacag acttcgtcac gctgacgatt caccaggagg tcgcggcggc gttcacccag
     3421 cacgaagcag cacagcgctc gctggagatt tacacgcgtg gtgtacgaga ggtcgcgcgc
     3481 cagaacctag agatcatccg gaaggcctat gacttggggc ggacctcact gctcgacgtg
     3541 attaccgagc agcggcgcta tatcgagatc gaaatgggat atacggagtc cttgaagcag
     3601 gtgtatgacg cggtggttga catcgagcgg gcgggcggtg ccccggaacg ctgaggcgag
     3661 gggaggccaa tggatgtaag agacgaaagg atgatccaat ctccagaggt gcaggggggg
     3721 cgcagcgggc tcgggcggag tctcgtaagg gggttgatgg cgattggctt gatcgcgatc
     3781 ggggctgcag gagcggtcct ggtgctgcga ttcggaaata atacccctcc ggggctggtc
     3841 actgcagcgc cgactccgac ctcgatcgaa gcacctgcgt tggcgggaca gaatgccgta
     3901 gagccggctg acgaggtcga ggttgtgctc tcgcccgagg cagtggccca ggcggggatc
     3961 aaaaccgcca aggtcgacgt cgtcgaatct aacacctcca tccaggtccc gggcacggtg
     4021 atggccaatg cctaccggga ggtgaaagtt ttcccgatcg tcggggggat catcaccaag
     4081 gtccatgtgg agctgggggc gtcggtcaga cgcggggtgc cgctcgccac actcttcagc
     4141 gccgagctgg ccgaggccca gacgaaatat ctcacgatga aggcgatgct tgtggccgat
     4201 caccaaaagc tcgagcgcac gaagcagctc gtcgagatcg gcgcggccag ccgtcaggag
     4261 cttgaagagg ccgtggcggc caatgccagc cgggccacgg aggtcgaggc cgcccggcag
     4321 cgcctcctcc aactggggct gagccgcaaa caagtggcgt cgctgagcag cccaagccag
     4381 gccgtttcgg acgtcgtggt gcccgcccct atcaacggca tcatcaccgg tcgttcggcc
     4441 aacctcggcc aggtggtcgg catgggagag gagctgttcg tggtcactga cctgtcaga
//
LOCUS       DASWKS010000475         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1351226, whole genome shotgun sequence.
ACCESSION   DASWKS010000475 DASWKS010000000
VERSION     DASWKS010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351226"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1193
                     /locus_tag="VGA78_13475"
     CDS             <1..1193
                     /locus_tag="VGA78_13475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894934.1"
                     /translation="PAAVGYSQQWQNAGTLQNTTFELGLTVPIVNNDKFFWQARATWD
                     RTRTYITELFTPEFLYGGGTAQGTGSFFFMSADSRKTCLPGEVGHFPGEAGFEPGQAR
                     PNCTGPQLNRFGNIYGRRFLKNCNELHASIRTRCGPGQDFQLNDQGWLVYVGAGNSYR
                     DGITKNLWQTTLPAAQSPWGVVLYWGHPIVDRPLAGQPGQGVGINQIIGNTLPDFRFS
                     FSNDFQWKRLTVYALLDATIGHYINNQGEGWGLLDLSSAQFDQGGATVETAKPVGYSW
                     RSGPSESTGTGGFYDVLTPNNYVVEKGSYAKLREVSVTYKLGAVGGFGDFTVGVIGRN
                     LGTITGYSGYDPEVGCGGRGGAGACGNGGSGTRGTGSGLINQTDAFDFPTLRTFTFLV
                     STRF"
     gene            1206..>2813
                     /locus_tag="VGA78_13480"
     CDS             1206..>2813
                     /locus_tag="VGA78_13480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894935.1"
                     /translation="MNRSFIRCGAVIGMIGLAACDVEVANVNEPSRTQIKLQVADLEN
                     FLGTQYRRWHSALYGATGNIWGMANVMSFENFSTLSNNCQGQRVGIPRPINDNQVGSP
                     CSGEQSLIYNRASEVARGASDVLLRMDEPDFTFGTAGKDARNRAFAHFLRGISLGYLA
                     MVYDSAAIVSPSDPVAAGTAQPQELSHYTAVVAAALEALDNALAAAPGMEALAANWMF
                     WAGTGTGTGASAMPEAEFVRIVRSYRARIRANVARTPAERAAVDWSAVIADAQNGITA
                     DHRIVTTATSGVLSGPNNTWVNQWYAYVTWHQMTPFIAGMADTSGAYAAWLAEPLTVR
                     GASAKFFMITPDQRFPQGETRAAQQADFTLAGSGTAANAGCSGANQTCKRFFRNRDVS
                     DPPASPAWGGSQYDHTRHYSWRTAGAGGVGQTGPFPFFTKAELDLLAAEGHFRKGEYA
                     QAAALVNVTRTACGPGGVPAGCTPRPAGNGRPGDPGGGLLAVTDDANAAVPGGAAGCV
                     PKLPVNASNAGGGTVTCGTLWDALKWEK"
BASE COUNT          482 a          965 c          939 g          427 t
ORIGIN      
        1 tcccggcggc ggtcgggtat tcccagcagt ggcagaacgc cggcaccctg cagaacacga
       61 ccttcgagct cgggctgacg gtgccgatcg tgaacaacga taagttcttc tggcaggcca
      121 gggccacgtg ggaccggacc cggacctaca tcaccgaact gttcacgccg gagttcctct
      181 atggcggcgg gaccgcccag gggaccggca gcttcttctt catgtcggcg gacagccgga
      241 agacctgcct cccgggcgag gtagggcact tccccggcga ggcggggttc gagccgggcc
      301 aggcccgtcc caactgcacc ggtccgcagc tcaaccggtt cggcaacatc tacgggcggc
      361 ggttcctgaa gaactgcaat gagctgcacg cctcgatccg gacccgctgt ggccccggcc
      421 aggacttcca gctcaacgac cagggctggc tggtgtacgt gggagcgggc aacagctacc
      481 gggacgggat caccaagaac ctgtggcaga ccacgttgcc ggcggcccag tctccctggg
      541 gtgtcgtgct gtactggggc cacccgatcg tggatcgccc cctggcaggc cagcccggac
      601 agggtgtcgg aatcaaccag atcatcggca acaccttgcc cgacttccgg ttcagcttca
      661 gcaacgactt ccagtggaag cggcttacgg tctacgccct gctcgatgcc accatcgggc
      721 actacatcaa caaccagggc gagggctggg gattgctgga cctgagctcg gcccagttcg
      781 accagggggg cgcgacagtc gagaccgcca agccggtagg atactcctgg cggtccggtc
      841 cgtccgaaag caccggcacc ggcggattct acgatgtgct cacccccaat aattacgtcg
      901 tcgaaaaagg ctcgtacgcc aagctgcgag aggtcagtgt gacctacaag ctcggtgccg
      961 ttggcggctt cggcgacttc acggtggggg tcatcggccg gaacctgggg accatcaccg
     1021 ggtacagcgg ctacgatccc gaagtcggct gcggcggccg gggtggcgcc ggcgcctgcg
     1081 gcaacggggg cagcggcacg cggggcaccg gctccggcct gatcaaccag accgacgcgt
     1141 tcgacttccc gacgctccgg acctttacct tcctggtctc cacccggttc taggagccgc
     1201 ctctcatgaa tcgatccttc atacggtgtg gggcggtgat cgggatgatc ggcctggccg
     1261 cctgcgacgt cgaagtggca aacgtaaacg agccctcccg gacgcagatc aagctgcagg
     1321 tggcggatct cgagaacttc ctgggtaccc agtaccggcg ctggcacagc gcgctgtacg
     1381 gggcgacggg aaatatctgg ggcatggcca acgtcatgtc cttcgagaac ttctcgaccc
     1441 tctccaacaa ctgccagggc cagcgggtcg gaatcccccg gccgataaat gacaaccagg
     1501 tcggaagccc ctgctccggt gagcaatccc tgatctacaa ccgggccagt gaggtcgccc
     1561 ggggggcctc cgacgtcctc ctgcgcatgg acgaacccga cttcacgttt ggaacggcgg
     1621 gcaaagacgc ccggaaccgt gccttcgccc atttcctccg cgggatctcg cttggatatc
     1681 tggcgatggt gtacgactcc gcggccatcg tctcgcccag tgacccggtg gccgccggca
     1741 cggcgcagcc gcaggaacta tcccactaca cggcggtcgt tgcggcggct cttgaagcac
     1801 tggacaatgc cctcgccgct gcacccggca tggaagccct cgctgcgaac tggatgttct
     1861 gggccgggac ggggaccggc accggcgcca gcgcgatgcc ggaggcggag ttcgtccgaa
     1921 tcgtgcggag ctaccgggcg cggattcgtg ccaacgtggc acgcacgccg gccgaacggg
     1981 ccgccgtcga ttggagcgcc gtcatcgcgg acgcccagaa cgggatcacc gccgaccacc
     2041 ggatcgtcac cacggctacg tccggcgtcc tgagtgggcc caacaacacc tgggtgaacc
     2101 agtggtacgc ctacgtcacc tggcaccaga tgacaccctt catcgcgggc atggcggata
     2161 cgtcgggcgc gtacgccgcc tggctcgccg agccgctgac ggtccggggg gcgtcggcca
     2221 agtttttcat gatcaccccc gaccagcggt tcccgcaggg cgaaacccgg gcggcgcaac
     2281 aggcggactt cacgctcgcc ggcagcggca ccgcggccaa cgccggctgc agcggcgcga
     2341 accagacctg caagcgtttc ttccggaacc gggacgtctc cgatccgccg gccagcccgg
     2401 cctggggcgg ctcccagtac gaccacaccc gccactactc ctggcggacc gcgggcgccg
     2461 gtggagtcgg ccagaccgga cccttcccgt ttttcacgaa ggccgaactg gacctgctcg
     2521 cggcggaggg ccatttccgg aagggcgagt atgctcaggc ggccgcgctc gtgaacgtta
     2581 cccgcacagc gtgtggcccc ggcggggtcc cggccggatg cacgccgcgg ccggccggca
     2641 acgggcgtcc cggcgatccc ggcggtgggc tgctcgcggt cacggacgat gccaacgcag
     2701 ccgtaccggg tggtgccgcg ggttgcgtac ccaagctccc cgtgaacgcg tccaacgccg
     2761 gcggcgggac ggtgacttgc ggcaccctgt gggacgcgct caagtgggag aag
//
LOCUS       DASWKS010000476         6037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2116078, whole genome shotgun sequence.
ACCESSION   DASWKS010000476 DASWKS010000000
VERSION     DASWKS010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2116078"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VGA78_13485"
     CDS             <1..739
                     /locus_tag="VGA78_13485"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HEX9894936.1"
                     /translation="LAVTPIATAAPTVDAQGISYYSGAPADGAFGFGYQVGAVYRPND
                     LVSLGAAYTSKQNFDPFKYNSTYANPTLPSYGTAREIEFELDVPAVLAGGLALAPLPN
                     LNLAADLRYIFYEQTTGFDEQGFNPDGSVKGFGWKDVTVLAVGGEFWPTERFAIRAGY
                     NHSSNPIPSEQSFFNVPAPAIVRDHYTVGLGIRPSRRFEISAAYYIAPEQSITGPIPN
                     PSLPATSTVSSTLKESALLIQFSFWTR"
     gene            complement(765..1811)
                     /locus_tag="VGA78_13490"
     CDS             complement(765..1811)
                     /locus_tag="VGA78_13490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894937.1"
                     /translation="MLNPLRPRRRVASARLALLWLAVAVPAAAQAPRWSVRSSPAADL
                     WFHGLAVIGFTGFGELPLYAPDYAASVAKDKAARGVVTELDRRAPYFRTEFARDSAFE
                     VLHFLPLYFPASEPGALLEALGQVAKDDAGQKTQPGSAERFGAAAVAAALPTAAERRV
                     LGELTAALDGEWRHWYRGVDTLAGKDARQERVGEFERAWLPLEAALGPYLNRYRLTGG
                     IILLTPAVGPDGRLFEGNPGAASDNVLAIAVQPPAADAVFFAVRELCYPAVRRAISAA
                     RLPDTDRVTGERLSGRAAVRCGRMLLARYAPDAVTGYETAWLRASGQRSQFTDGFVIP
                     DRLVRALEAELAPR"
     gene            1963..2283
                     /locus_tag="VGA78_13495"
     CDS             1963..2283
                     /locus_tag="VGA78_13495"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9894938.1"
                     /translation="MTRVRQRIDPEILNSAASVIRCLGHPLRLRLLEALESGERSVSE
                     LQVLSEAPQATVSEQLGVLRGQNIVGARREGPFVYYRILEPKVSRILACIRGCETPPG
                     RRNP"
     gene            2280..3557
                     /locus_tag="VGA78_13500"
     CDS             2280..3557
                     /locus_tag="VGA78_13500"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HEX9894939.1"
                     /translation="MNRIVILGGGTAGTIMANRLARLYRRAIDAGRTLITVIDQDDRH
                     VYQPGLLLLPFGVYRPEELVKPRQRQFAAGVEYLQAVIDRVDPNRDVVVLEDGRQVSY
                     DVLIVASGTRIAPEETEGMMGEGWGTRVHEFYTLEGATRLRDALAQWPGGRLVINPVD
                     MPIKCPVAPLELAFLADWFFTERGIRDRVTITYVTPLDAAFTKPVAARSLAHLLEQKH
                     IELVTEFATGRVDGGAGQLVSWDDRTVDFDLLVSVPLHSGQEFVGRSEGLGDDLKFVL
                     TNPHTLQAECRRNIFAIGDATNLPASKAGSVAHFEAEVLTENIRRYMDGEPLLPDFDG
                     HANCFVETGFNKALLIDFNYDVEPLPGHYPLPLVGPMSLLKESRLNHTGKMLFRWIYW
                     NVLLPGHDLPGIAPQMTMRGKRLPAPAAEPATV"
     gene            3571..3888
                     /locus_tag="VGA78_13505"
     CDS             3571..3888
                     /locus_tag="VGA78_13505"
                     /inference="COORDINATES: protein motif:HMM:TIGR03342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HEX9894940.1"
                     /translation="MPTLTMLDTVLDVDGEGFLQKPEQWTPALGEEIAGESGVPVLTD
                     RHWLVINYMRDRYLKTGSAPSIRTLGKESGVDIKELYKLFPKGPAKLAAKIGGIPKPK
                     GCI"
     gene            3927..4448
                     /locus_tag="VGA78_13510"
     CDS             3927..4448
                     /locus_tag="VGA78_13510"
                     /inference="COORDINATES: protein motif:HMM:NF025066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HEX9894941.1"
                     /translation="MSTTAMLPQLAEHVESEEPVRPITKVAIIVSKGSLEEIYPGLIM
                     ANGARMEGIEASVFFTFFGMDAIRKTKQDHIKVATVGNPALGVPTLLGGLPGMAALVT
                     HQMKKKMEQLDIPPIAELVQMIADSGAKLYACKASVEMFGLSRVDFIDDLEGIITVGE
                     FYELAAGGQIIFT"
     gene            4603..5760
                     /locus_tag="VGA78_13515"
     CDS             4603..5760
                     /locus_tag="VGA78_13515"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894942.1"
                     /translation="MRGWLLALFVVASGWNVPVTAQQPPARARPRPGEGREPEFPAPT
                     ILQYKPRSTLVVPAHPVPRAKYPVVDIHGHPPALTSPETIEAVGQAMDGLNLRVMVNA
                     SGTSGERLTRQIEAVKASRYKDRFVMFTTLDLREVGPGSGQKIAAQLEADVKAGAVGV
                     GEIGKGFGLGNRKTDGTRLHLDDPELDPVWETAARLKIPVFIHVADPAEFFQPIDFQN
                     ERWLELALFSNRRYNDRSRFPSFEELMGERDRLLARHPRTIWVLAHLGWHANDLARLG
                     KLFDRLPNLYSEVGAVLYDLGRQPFTGHDFFVKYQDRLLFGKDSFQPDEYPYYWRVFE
                     TRDEYFDYYRDYHAFWKLYGLGLPDTVLKKIYYGNALKIIPGIPRAGFPPS"
BASE COUNT         1107 a         1949 c         1989 g          992 t
ORIGIN      
        1 gctcgcggtc acaccgatcg cgacggcggc ccccacggtc gatgcccagg gaatttccta
       61 ctactccggc gcgccggccg acggtgcgtt cggtttcgga taccaggtgg gtgcggtgta
      121 ccggcccaat gatctggtct cattgggggc ggcgtacacc agcaaacaga atttcgaccc
      181 gttcaagtac aacagcacct acgcgaatcc caccctgccc agctacggca ccgcccggga
      241 gatcgagttc gagctcgatg tgcccgcggt tctggcgggt gggctggcgc tggcaccgct
      301 gcccaacctc aacctggccg cggacctgcg ctacatcttc tacgagcaga ccaccgggtt
      361 cgacgaacag ggcttcaacc ccgacggctc ggtcaagggc ttcgggtgga aggatgtcac
      421 ggtactcgcg gtgggcgggg aattctggcc caccgagcgg ttcgcgattc gggccggcta
      481 caaccactcg tcgaatccga tcccgagcga gcaatcgttc ttcaacgtgc cggcgcccgc
      541 gatcgtgcgg gatcactata cggtgggtct cgggatccgg cccagccgcc ggttcgagat
      601 cagcgcggcc tattacatcg cgccggagca gtccatcacc ggtccgattc ccaacccgtc
      661 gctgccggcc acgtcgaccg tgagcagcac cctcaaggag agcgcgctgt tgatccagtt
      721 cagcttctgg acccggtgaa tcggtggccc cgcgaggaag tttctcagcg cggggccagc
      781 tccgcctcca gcgcccgaac caaccggtcc gggatgacga acccatcggt gaactggctc
      841 cgctgcccgc tggcgcggag ccaggccgtt tcatacccgg tgaccgcatc gggagcatac
      901 cgcgccagca gcatgcggcc gcagcgcacc gcggcccgcc cgctcagtcg ctctccggtc
      961 acccggtcag tatcgggcag ccgagcggcg ctgatcgcgc gccgcaccgc cggataacac
     1021 agctcccgga ccgcaaagaa cacggcatca gcggccggtg gctggaccgc aatggcgagc
     1081 acattgtccg aggccgcacc gggattgcct tcgaacagcc ggccatcggg tccgaccgcc
     1141 ggcgtcagca ggatgatccc gccggtcaga cgataccggt tgaggtaggg accgagcgcg
     1201 gcctccagcg gaagccaggc ccgctcgaat tccccgaccc gctcctgtct ggcatccttg
     1261 cccgccaggg tatcgacgcc gcgataccaa tggcgccatt caccatccag ggcggccgtc
     1321 agctcgccca gcactctgcg ttccgcggcg gtcggcagcg cggcggctac cgcggcggca
     1381 ccgaagcgct cggccgagcc aggctgggtc ttctgcccgg catcgtcctt cgcgacctga
     1441 cccagtgcct ccagcagggc ccccggttcc gaggcgggga aatagagcgg cagaaagtgc
     1501 agcacttcga acgcgctgtc ccgcgcgaac tcggtgcgga agtatggggc ccgccggtcc
     1561 agctcggtca cgacaccgcg ggcggctttg tccttcgcca cgctcgcggc gtagtcggga
     1621 gcgtagagcg ggagttcgcc gaatccggtg aacccgatga ccgccaggcc atggaaccag
     1681 aggtcggccg cgggggacga acggaccgac cagcgaggtg cctgtgcggc ggccggcacg
     1741 gcgacggcaa gccagagcag agcgaggcgg gcggaagcaa cccgccgccg gggacgcaga
     1801 ggattgagca tgaggtcgaa ataacggggc cagaggctca aacggaacct tgggacggaa
     1861 tgaagccggt ctcacgctgg cttcaccgcc gcttggaacc ccagccgcga gattgggcac
     1921 agggatatgg agatatcccc attaccccat gtggaggcca cgatgacccg agttcgacag
     1981 cggattgatc ccgagatcct gaacagcgcg gcgagcgtga tccgctgcct gggccatccg
     2041 ctccggttgc ggctgctcga agcactggag tcgggggagc gttccgtgag tgagctgcag
     2101 gtgttgagcg aggcaccaca ggccacggtc tcggagcagc tcggcgtgct gcggggacag
     2161 aacatcgtgg gcgcccggcg cgagggtccc ttcgtctact accggatcct cgagcccaaa
     2221 gtcagtcgca tcctggcctg cattcggggc tgcgagacgc cgccgggacg gaggaaccca
     2281 tgaaccgcat tgtgatcctg ggcggaggaa ccgccggcac catcatggcc aaccggctgg
     2341 cgcggctcta ccggcgcgcc atcgacgcgg gccggacgct catcacggtc atcgatcagg
     2401 acgaccggca cgtctaccaa cccggcctgc tgcttctgcc gttcggcgtc tatcggcccg
     2461 aagaactcgt caagccgaga caacggcagt ttgccgctgg agtggaatac ttgcaggcag
     2521 tgatcgaccg ggtggacccc aaccgcgatg tggtggtgct ggaggacggg cggcaggtct
     2581 cctacgacgt gctcattgtc gccagcggta cccggatcgc ccccgaggaa accgagggca
     2641 tgatgggcga aggctgggga accagggtgc acgaattcta cacgctggaa ggagccaccc
     2701 ggctgcgtga tgccctggcg caatggccgg gcggacgatt ggtgatcaat ccggtcgaca
     2761 tgccgatcaa gtgtccggtc gcgcctctcg agctggcctt cctggccgac tggttcttca
     2821 ccgagcgcgg gatccgtgac cgggtgacca tcacgtacgt cactccgctc gatgccgcgt
     2881 tcaccaagcc ggtggcagcc aggtcgctgg cgcatttgct ggagcagaag catatcgagc
     2941 tggtcaccga gttcgccacc ggccgggtgg acggcggcgc gggtcagctg gtctcgtggg
     3001 acgatcggac ggtggacttc gatctgctgg tgagcgtgcc gctccacagc ggccaggagt
     3061 tcgtgggccg ctcggagggg ctgggcgacg atctcaagtt cgtcctcacc aacccgcaca
     3121 cccttcaggc ggaatgccgg cggaacatct tcgcgattgg cgacgccacc aacctgccgg
     3181 cctccaaggc ggggtcggtg gcgcacttcg aagccgaagt gctgaccgag aatatccggc
     3241 gctacatgga cggggagccg ctgctcccgg acttcgacgg acacgccaac tgcttcgtcg
     3301 agaccggctt caacaaggcg ctattgatcg acttcaacta cgacgtggaa ccgctccccg
     3361 ggcattaccc gctgccgctg gtgggtccga tgtcactgct caaggaatcg cggctcaacc
     3421 acaccgggaa gatgctgttc cgctggattt actggaacgt gctgctgccg ggtcacgacc
     3481 tgcccgggat tgcgccccag atgaccatgc gcggcaagcg ccttccggcg cccgccgcgg
     3541 aacccgcgac cgtataggag tacaacgcca atgccgacac tgacgatgct ggacaccgtg
     3601 ctggatgtgg atggggaggg cttcctgcag aagccggagc aatggacccc ggcgctgggt
     3661 gaggagatcg ccggcgagag cggggtcccg gtcctgaccg accggcactg gctggtgatc
     3721 aactacatgc gtgaccggta tctcaagacc ggctcggccc cctccatccg gacgttaggc
     3781 aaggagtcgg gggtcgacat caaggagttg tacaagctgt tccccaaggg cccggcgaag
     3841 ctggccgcca agatcggcgg cattcccaag cccaagggct gcatctaacg catccacggg
     3901 cgcaccaggc gccgggagaa agaaccatgt cgacgaccgc gatgttgccg cagctggccg
     3961 agcacgtgga aagcgaggag ccggtccggc cgatcaccaa ggtagccatc atcgtctcga
     4021 agggatcgct ggaggagatc tatccggggc tcatcatggc caacggggcc cggatggaag
     4081 ggatcgaagc cagcgtgttc ttcactttct tcgggatgga tgcgatccgg aagaccaaac
     4141 aggaccacat caaggtggcc acggtgggga acccggcgct gggggtgccg accctgctcg
     4201 gcgggctccc cggcatggcg gccctggtga cccatcagat gaagaagaag atggagcagc
     4261 tcgatattcc gcccatcgcc gagctggtgc agatgatcgc cgattcggga gccaagctct
     4321 acgcctgcaa ggcgtcggtg gagatgttcg ggttgtcacg ggtcgacttc atcgacgatc
     4381 tggaagggat cattacggtg ggtgagttct acgagctggc ggcggggggg cagatcatct
     4441 ttacctgagg cgtaaggtct gaggactggg actaaggact gagcgattct ttcgcagtcc
     4501 ttagtcctta gccctcagta aacggtgaac cgttgatccc ggaccctggt acctggcatc
     4561 attcctccgc tgtactgcga ccactgcaac caggagtacc gaatgcgggg atggctgctg
     4621 gccctcttcg ttgttgcatc aggctggaac gttccagtca cggctcaaca gccgcccgcc
     4681 cgggcccgcc cccgcccggg cgagggacgc gagcccgagt tcccggcgcc caccatcctg
     4741 cagtacaagc cgcgatccac cctggtcgta ccggctcatc cggtaccccg ggccaaatac
     4801 ccggtggtcg acatccacgg gcatcccccc gccctgacct cgccggagac catcgaggcc
     4861 gtgggacagg cgatggacgg cctgaacctg cgggtgatgg tgaacgccag tggaacctcg
     4921 ggcgaacggc tgactcggca gatcgaagcc gtgaaggcca gccgctacaa ggaccggttc
     4981 gtgatgttca cgaccctcga cctgcgcgag gtcggtccgg ggtcgggcca gaagatcgcc
     5041 gcccagctcg aggccgacgt gaaggcagga gccgtcggcg tgggagagat cggcaagggt
     5101 ttcggcctcg gaaaccgcaa gaccgacggg acccgcctcc atctggacga tcccgagctg
     5161 gacccggtgt gggagaccgc ggcccgtctc aagatcccgg tcttcattca tgtcgccgat
     5221 ccagccgagt tcttccagcc gatcgatttc cagaacgaac gctggctgga gctggcgctc
     5281 ttttccaacc ggcgctacaa cgaccgctcc cggttcccgt cgttcgagga gctgatgggg
     5341 gaacgggatc gtctcctcgc gaggcatccg cgcacgatct gggtgctggc gcatctgggc
     5401 tggcacgcca acgacctggc ccggctgggc aagctgttcg acagactgcc gaacctctat
     5461 tccgaggtcg gtgccgtgct gtacgacctg ggccgccagc ccttcaccgg acacgacttc
     5521 ttcgtgaagt accaggaccg gctgctgttc gggaaggact ccttccagcc ggacgagtat
     5581 ccctattact ggcgtgtgtt cgagacccgg gacgagtact tcgactacta ccgggattac
     5641 cacgctttct ggaagctcta tgggctcggg ctgcccgata cggtgctgaa gaagatctac
     5701 tacggcaacg cgctcaagat cattcccggc attccgcgag ccggattccc gccctcatga
     5761 aggccgccgg ccggcatcaa ggtacagagg gtcgacacgg atgcttcgga tgggacggat
     5821 caggcggatc actccttatt agttgtttta ggggggaggg ggtaataaca aaaggatccg
     5881 tccgatccgt tgcatccgaa gcatccgctc cgaccgttgg tccggaatgc acgattgaca
     5941 tatctatgtc atattaatat gctttggtgc atgcggacca cggttcggct cgacgaacag
     6001 ctgctgcggc aggccaagga gtacgccgcg cgtaccg
//
LOCUS       DASWKS010000477         6325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2485367, whole genome shotgun sequence.
ACCESSION   DASWKS010000477 DASWKS010000000
VERSION     DASWKS010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2485367"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1227
                     /locus_tag="VGA78_13520"
     CDS             <1..1227
                     /locus_tag="VGA78_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894943.1"
                     /translation="GEGVGIALDAVRSNKVRAALTILGVAIGVMVVIAIASMITGINR
                     AVMKEVENLGPKTFFVQRHFQGGLDISDGSDELSPWRRNPWITVEEAEMVRRLPLVQE
                     VTWREEANGPVGYQDQKLSSVNIIGMNPPWIGVAGGSIASGRNFNQAEYAAGSHVAVI
                     NDYLAEQFFPGRDPIGKRIKIYGQPFEVVGVYLEASQSLFGSAKSPVLIMPHSAFAKV
                     ADYWKGWLMFLVDPVEDVTVAEAQDQVIAALRASRGLKPAQDNNFAVVSQEKLLETWD
                     NITHGFFLVMLALSSVGLMVGGVGVVAIMMISVTERTREIGVRKALGATRREVMFQFL
                     VEAATLTLLGGAVGMLLGGGIAWLVNTFTPIPAAVPLWSVVVAIAASIVTGVFFGLYP
                     ASKASRLDPVEALRYE"
     gene            1284..2528
                     /locus_tag="VGA78_13525"
     CDS             1284..2528
                     /locus_tag="VGA78_13525"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894944.1"
                     /translation="MPLLEAIRLAISSILTAKLRAFFTLLGIIVSVGFLVAVTAIIQG
                     MNAYVRDNLRGAMIGTNSFQVRRTPIALGLLDDSTVRVINRRPVISREDADVVRRALP
                     WARAVSLQSGWPTPLADLRYRNRTVGSVTVFGVTPDYQIVQDYRFAAGEPLTDVDVNE
                     RRLAVVIGHEVADKLFENAELAIGRRIRIGGREVSVKGVTAPKGRVLGQSFDGFVLVP
                     LTVFEQMYGRRLTTTVSVKLDDAAELPGAMDRAEEAMRLAHRLGPGDANDFTIDKADA
                     LVAFWTSLTGLLFAVIPAVVTIGIIVGGIVIMNIMLMSVNERTREIGIRKSLGARRRD
                     IRRQFLVEAVILSLVGGVLGVLAGAALAQLVSTVSPLPARVTTWSVAVALALGAGTGI
                     VFGVYPATRAARLDPITALRSE"
     gene            2532..3770
                     /locus_tag="VGA78_13530"
     CDS             2532..3770
                     /locus_tag="VGA78_13530"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9894945.1"
                     /translation="MILRNVDEGVAVALDALRSNKLRSFLTILGVVIGVSTVMTMASI
                     VDGIRTQIFNALNAASPNAFYVMRFFSQTPLNPDNLPYEVRIRPVLTEADAEAIAGAS
                     GIRHAALWNQAFSRIEYRGIRSQSLVVYGADDRYMELQGGTLVLGRFFTRSELKGEDV
                     IVLEEELSRRLFGGMNPLGQTVKAGAKAFRVIGIWRTPDNVFQPPGVSVGAIVPHLTA
                     KQSFNFSDTNDLFIVVLGGDDISVDQAQDQATMALRRQRSLRPGTPNTFDFITQDQIL
                     DTISSLTSAFFLVMVAISSVALLVGGIGVMAIMMVSVTDRTREIGLRMACGATRREIL
                     WQFLVEAATLTFIGGLIGILFGLGAGQLLKAVIGLRSSPPLWSAVLAAGVSIGIGLTF
                     GLLPANRAARMDPVEALRHE"
     gene            3967..4683
                     /gene="bshB1"
                     /locus_tag="VGA78_13535"
     CDS             3967..4683
                     /gene="bshB1"
                     /locus_tag="VGA78_13535"
                     /inference="COORDINATES: protein motif:HMM:TIGR04001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HEX9894946.1"
                     /translation="MPVDLLAIAAHRDDVELTCAGTLAKAIDQGYRTGILDLTAGETG
                     TRGSATLRAEEALAAARILGVSERRNAGLPDAHLANTDPGRRAVVEQLRYFRPRVVIL
                     PFPVGRHPDHRVASELGRDACYLAGLARYDAPGEPHRPHKILYALAYREDPVKPTFVV
                     DISDQFSRKLDSIRCYASQFDGARNAGEIFPTGQDLYGLIETQNAHYGSLIRTRYGEP
                     FFTHETLRIDDVVRLEVQSM"
     gene            complement(4705..5997)
                     /locus_tag="VGA78_13540"
     CDS             complement(4705..5997)
                     /locus_tag="VGA78_13540"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9894947.1"
                     /translation="MIASGAVLRLLVALPVPIQARTQPAMAIEGVTIVSLDSGPLLFD
                     HTVLVLNGRIARVGPRQTVAVPAGATLIDGQGKYLMPGLADMHAHITARDFPLFLANG
                     VTTVREMNGSPQHLAWRDSVRQGRLPGPSLVVASPLLAGVPQRYRHQLLTTPAEAVAL
                     VRSAQGLGYDAIKVYDGLSVETYQALAAEARRAGLPLTGHVPDAVGLVGVVQQGQRSI
                     EHTQEILKRLDGHPPDSAAIVTAVGRLVGHGVWVTPTLAVFERLSLAGSAEVQSRFDR
                     PEMALVDSATFAWWLSFRRPGAGAASPRAQQLADAHRLVVRELARRGVPILVGTDTPN
                     PFMVPGFSLHDELEALTGAGWSRVSVLRAATRGAAEFLGRSGEFGSIAPGLRADLVLL
                     DGDPLQDLSLLRRPAGVVVGGRWLARDTLDRMLEAARR"
     gene            complement(5994..>6325)
                     /locus_tag="VGA78_13545"
     CDS             complement(5994..>6325)
                     /locus_tag="VGA78_13545"
                     /inference="COORDINATES: protein motif:HMM:NF019829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PaaX family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HEX9894948.1"
                     /translation="SRFVPRHWNLEALEPEYRRFVERFTAVWLRERWSDRQAFVLRFA
                     VVFAYLEPAWRDPELPSALLPRSWPGRTARTLAARLYRRLLPGAVRFAHSMLPTPHRR
                     AGSAETA"
BASE COUNT         1036 a         2162 c         2112 g         1015 t
ORIGIN      
        1 ggggaagggg tggggatcgc gctcgacgcg gtccgctcca acaaggtgag ggccgcgctc
       61 acgatcctgg gtgtggcgat cggcgtcatg gtggtgatcg cgatcgcctc catgatcacc
      121 ggcatcaacc gggcggtcat gaaggaggtc gaaaacctgg ggcccaagac cttcttcgta
      181 cagcgccatt tccagggcgg actggacatc tccgatgggt cggacgagct gagcccctgg
      241 cgccgcaacc cctggatcac cgtggaggaa gcggagatgg tccggcggct gcccctggtc
      301 caggaggtca cctggcggga ggaagccaac ggcccggtcg gctatcagga ccagaagctg
      361 tccagcgtca acatcatcgg gatgaatccc ccctggatcg gggtcgcggg cggcagcatt
      421 gcgagcggcc gcaatttcaa ccaggcggaa tacgccgccg ggtcccacgt ggccgtgatc
      481 aacgattacc tggccgagca gttcttcccg gggcgggacc cgatcggcaa acgcatcaag
      541 atctacgggc agcccttcga ggtcgtcgga gtctatctgg aggcgagcca atcactcttc
      601 gggagcgcca aaagtccggt tctgatcatg ccgcactcgg cgttcgccaa ggtggcggat
      661 tactggaagg gctggctcat gttcctggtc gacccggtgg aggatgtcac ggtggccgag
      721 gcccaggacc aggtcattgc ggccctgcgc gccagccgcg gactgaagcc ggcccaggac
      781 aacaatttcg cggtagttag ccaggaaaag ctgctggaga cctgggataa catcacccac
      841 ggcttcttcc tggtgatgct ggcgctctcc agcgtgggac tgatggtggg cggcgtcggc
      901 gtggtggcca tcatgatgat ctcggtgacc gagcgcaccc gggagatcgg ggtgcgcaag
      961 gcactgggcg ccacccgccg cgaagtcatg tttcagttcc tggtggaagc cgctaccctc
     1021 acgctcctgg gaggcgccgt cggcatgctg ctgggcggcg gaatcgcctg gctggtcaat
     1081 accttcaccc cgattccggc ggccgtcccg ctctggtccg tggtggtcgc catcgccgcg
     1141 tcgatcgtca ccggcgtgtt cttcgggctg tatcccgcca gcaaggcgag tcggttggat
     1201 ccggtcgagg cgctccgcta cgagtagccg ctggccgagc tatcgcgagt cgtcgctcgg
     1261 cgcgaccctg actatttttg gccatgcccc tgctggaagc gatccgcctg gccatctctt
     1321 ccatcctgac cgcgaagctt cgcgcgttct tcacccttct cggcatcatc gtatcggtcg
     1381 gctttctggt ggcggtcacc gcgatcatcc aggggatgaa cgcctacgtc cgggacaatc
     1441 tgcgcggcgc gatgatcggg accaactcgt ttcaggtccg gcgcacgccc atcgccctcg
     1501 gcctgctgga cgattccacg gtgcgggtca tcaaccggcg gccggtcatc tcgcgggaag
     1561 acgccgacgt cgtgcgccgg gccctgccct gggcccgcgc cgtctcgctc caatccggct
     1621 ggcccacgcc gctggccgac ctcaggtacc gcaaccgcac cgtcggcagc gtgaccgtgt
     1681 tcggcgtcac ccccgactac cagatcgtgc aggactaccg ctttgccgcg ggggaaccgt
     1741 tgaccgacgt agacgtcaac gaacgccgcc tggccgtcgt gatcgggcac gaggtggccg
     1801 acaagctgtt cgagaatgcc gaactcgcca tcgggcggag gatccggatc ggtggccggg
     1861 aggtgtcggt caagggcgtg accgcgccca agggccgggt gctgggacaa tcgttcgacg
     1921 gcttcgtgct ggtgccgctc accgtgttcg agcagatgta cggccggcgg ctgacgacca
     1981 cggtgtcggt gaagctggat gacgccgcgg aactgccagg cgcgatggac cgggccgaag
     2041 aagccatgcg gctggctcac cggcttgggc cgggcgatgc caacgacttc accatcgaca
     2101 aggccgatgc gctggtcgcg ttctggacca gcctcaccgg actgctgttc gcggtcatcc
     2161 ccgcggtcgt gacgatcggc atcatcgtgg gcgggatcgt gatcatgaac atcatgctga
     2221 tgtcggtcaa cgagcggacc cgcgagatcg gcatccggaa atcgctcggc gcgcgacggc
     2281 gcgatattcg ccggcagttt ctggtggagg ccgtgatcct gtcgctggtc ggcggcgtgc
     2341 tgggtgtcct ggcgggtgcg gcgctggccc agctggtctc caccgtgagc ccgctcccgg
     2401 cccgggtcac cacctggtcg gtggcggtgg ccctggcgct gggcgcgggg accggcatcg
     2461 tcttcggggt gtaccccgcg acccgggccg cccggctcga ccccatcacg gcgctccggt
     2521 cggaatagcc cgtgattctc cgaaacgtcg acgagggcgt cgcggttgcg ctggacgccc
     2581 tgcgcagcaa caagctccga tccttcctca ccattctggg cgtggtgatc ggcgtctcga
     2641 ccgtgatgac catggcctcg atcgtggacg ggatccgcac ccagatcttc aacgcgctca
     2701 acgcggcctc gcccaacgcg ttctacgtga tgcggttctt ctcccagacc ccgctcaacc
     2761 cggacaacct gccgtacgag gtccggatcc ggccggtgct caccgaagcc gacgccgagg
     2821 ccatcgccgg cgcgtccggc atccgccacg ccgcgctgtg gaaccaggcc ttcagccgga
     2881 tcgagtaccg cggaatccgg tcgcagagcc tcgtggtgta cggggccgat gaccggtaca
     2941 tggagctgca ggggggaacc ctggtgctgg ggcgcttctt cacccgctcc gagctcaagg
     3001 gcgaagacgt gatcgtgctg gaggaggaac tgtcgcgccg cttgttcggc ggcatgaacc
     3061 cgctcggcca gacggtcaaa gccggagcca aggcgttccg ggtcatcggg atctggcgca
     3121 ccccggacaa tgtcttccag ccgccgggtg tgtcggtcgg cgcgatcgtg ccgcacctga
     3181 ccgcgaaaca atccttcaac ttcagcgaca ccaacgatct gttcatcgtg gtgctgggcg
     3241 gcgacgacat ttcggtggac caggcccagg accaggccac catggccctg cggcgccaac
     3301 gaagcctgcg gcccggcacg cccaacacct tcgacttcat cacccaggac cagattctcg
     3361 ataccatcag ctcgctgacc tcggcctttt tcctggtgat ggtcgcgatc tcgagcgtgg
     3421 ccctgctggt cggggggatc ggcgtgatgg cgatcatgat ggtgtcggtc accgaccgga
     3481 cccgcgagat cggactccgg atggcctgcg gcgccacccg gcgcgagatc ctgtggcagt
     3541 tcctggtcga agccgcgacc ctcaccttca tcggcgggct gatcggcatc ctgttcggcc
     3601 tgggggcggg ccagctgctc aaggcggtga tcggcctgcg gtcctcaccg ccgctctgga
     3661 gcgcggtcct ggccgcgggc gtgtcgatcg gcattggctt gaccttcgga ctgctgcccg
     3721 ccaaccgggc cgcgcggatg gatccggtgg aggcgttacg acatgaatag gtcggtcagt
     3781 cgggcagtcg gtccgtcggt ctgttcggtc ggtccggcgg tcagtcgatc agtcggtcgt
     3841 tggtcgcgct ttcgtcaatc cattctccga cagaccgaca gaccgacaga cctaccgacc
     3901 gaccgaccga ccgactgacc gaccgactga ccaactgacc aactgaccaa ctgaatggag
     3961 ttccacatgc ccgtcgacct gctggccatc gccgcccacc gcgacgacgt ggagctcacc
     4021 tgcgccggga ccctggccaa ggcgatcgat caagggtacc gcactggcat cctcgatctg
     4081 actgcgggcg aaaccgggac ccggggctcg gcgacgctta gggccgagga ggctctggcg
     4141 gctgcgcgaa tcctgggcgt gagcgagcgt cgcaatgccg ggttgcccga tgcgcacctc
     4201 gccaacaccg atccgggccg gcgagccgtg gtcgagcagc tgcgctactt cagaccccga
     4261 gtcgtcatcc tcccgtttcc agtgggccgt catcctgacc accgggtggc gtccgagctg
     4321 ggacgcgacg cctgctatct cgcggggtta gcgcgatacg acgcgccggg cgagccgcac
     4381 cggccccaca agatcctgta cgcgctcgcg tatcgtgagg acccggtcaa gcccaccttc
     4441 gtggtcgaca tcagcgatca gttcagccgc aagttggact cgatccgctg ctacgccagc
     4501 cagttcgacg gggcccgcaa cgccggcgag atcttcccca ccggacagga tctctacggt
     4561 ctgatcgaga cccagaacgc ccactatggc tcattgatcc ggacccgcta cggcgagccg
     4621 ttcttcaccc acgagacgct acggatcgac gatgtggtca ggctggaggt ccaaagtatg
     4681 tgagagccgt cggccgccac gccatcatcg gcgggcggcc tccagcatcc ggtccagggt
     4741 gtcgcgggcc agccatcgtc cgcccacgac cacgccagcc ggccgccgca gcaggctcag
     4801 gtcctgcagc ggatccccgt ccaacaatac gagatccgcc cgcagtcccg gtgcaatgct
     4861 cccgaactcc ccgctccgac cgagaaactc ggcggcacca cgggtcgcgg cccgcaagac
     4921 gctcacgcgg ctccagcccg ccccggtaag cgcctcgagc tcatcgtgca gcgagaatcc
     4981 gggaaccatg aacgggttcg gggtatcggt cccgaccagg atggggactc ctcgtcgagc
     5041 cagctcccgc acgaccagcc gatgggcgtc ggcgagttgc tgagcgcggg gcgaggccgc
     5101 gccggccccg ggccggcgaa aactcaacca ccaggcgaac gtggccgaat cgaccagcgc
     5161 catttccggt cgatcgaacc ggctctgcac ctcggccgag cccgccaggg aaagccgctc
     5221 gaagaccgcc agggtcgggg tcacccacac cccatggccc accagccggc cgacggcagt
     5281 cacgatcgcc gcactgtcgg gcgggtggcc atccaggcgc ttgaggattt cctgggtgtg
     5341 ctcgatggaa cgctgaccct gttgcaccac accaaccagc ccgacggcgt ccggaacgtg
     5401 accggtcagc ggcaggcccg cccgcctcgc ctcggccgcc agcgcttgat aggtctcgac
     5461 gctcaggccg tcgtagacct tgatggcatc atagcccagc ccttgagcgc tccggaccag
     5521 ggccacggcc tctgccggcg tcgtgagcag ctggtgccga tagcgctgcg gcacgccggc
     5581 cagcagcggg ctggccacga ccagtgacgg accgggcaac cgaccctgtc gtaccgagtc
     5641 gcgccaggcc aggtgctggg gcgacccgtt catctcgcgc accgtggtta caccgttcgc
     5701 caggaacagc ggaaaatccc gggcggtgat gtgggcgtgc atgtccgcca ggcccggcat
     5761 caggtacttg ccctgtccgt cgatcagggt cgcgccagcc ggtacggcaa cggtctgccg
     5821 ggggccgact cgggcgatcc gcccgttcag caccagcacg gtgtgatcga acaggagcgg
     5881 ccccgaatca agcgagacga tcgtcactcc ctcgatcgcc atcgccggct gggtccgggc
     5941 ttggatcggc accggcagag ccaccagcag ccggagtacc gcacccgacg cgatcacgcg
     6001 gtctccgccg accccgcccg ccgatggggg gtcgggagca tggagtgagc gaaccggacg
     6061 gcgcccggaa gcaatcggcg atacaagcgg gcggcgagcg tcctggcggt tcggcccggc
     6121 caggagcgtg gcagcagggc cgagggcagt tcgggatcgc gccacgccgg ttcgagatag
     6181 gcgaacacca cggcgaatcg gagcacgaag gcctgccgat ccgaccagcg ctcccgcagc
     6241 cacaccgccg tgaaccgctc gacgaaccgg cgatactccg gctcgagcgc ctccagattc
     6301 caatggcgcg gcacgaaccg ggaga
//
LOCUS       DASWKS010000478        13733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_621593, whole genome shotgun sequence.
ACCESSION   DASWKS010000478 DASWKS010000000
VERSION     DASWKS010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621593"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1364
                     /gene="lon"
                     /locus_tag="VGA78_13550"
     CDS             <1..1364
                     /gene="lon"
                     /locus_tag="VGA78_13550"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEX9894949.1"
                     /translation="AKGPILLFVGPPGVGKTSVAKSIARAMGRKYVRISLGGARDEAD
                     IRGHRRTYVGAMPGRIIQGLKQAGSKNPVFLLDEVDKLGVSFQGDPASALLEVLDPAQ
                     NDSFTDHYLGVPFDLSEVLFIATANYMQNIPGPLLDRMEVVEFTGYTEREKLEIAKKY
                     LVPRQFTENGLSIEQLGLTDEAITEIIEGYTRESGVRQLERELGKLCRKVARKLAAKE
                     VERVAVDKAMVDDLLGRPKIHPEQKLLEDEVGVATAMYYTPVGGDIMFIEASTMKGKG
                     ELVLTGQLGEVMKESARAALTYAKAHAAALRIPEDMFDREVHIHVPAGAVPKEGPSAG
                     VTMATALISALSGRPVRHDIALTGEITLRGRVLPIGGLKEKILGAVRAGITRIVIPKE
                     NEPDLEDLPEEVKKRIDVFPVQELGEALALTLRGASFREGRLLFGNEEPSVVVPLTPT
                     FPH"
     gene            complement(1470..1805)
                     /locus_tag="VGA78_13555"
     CDS             complement(1470..1805)
                     /locus_tag="VGA78_13555"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX9894950.1"
                     /translation="MEHESLDQLMTRLRSEYLAEVPARLEELNAAANLWLSGREPSVP
                     LVTLFHRLSGSAGAYGFELVSSVCRLTEQWLATKPHRGAEARGRLKRALDQLRWAFEQ
                     GPTGPGISA"
     gene            complement(1809..2489)
                     /locus_tag="VGA78_13560"
     CDS             complement(1809..2489)
                     /locus_tag="VGA78_13560"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9894951.1"
                     /translation="MLDLTPFDFTPTESLIYEVLVTRGPGTGYAVARAAGLARANAYA
                     ALEALVSKGAARAEEGRPRRYRPEPPSLLLGRIVDRQSRAIEELSRSLEEVVAPASST
                     LVEVSSLRGVGQLLTLEIARARREVAAVLPSKAWPMLIPAVRRAAAGGVKLALFSDEP
                     AASDSVPIEVRRIQGLWPGRPVLAVVDEHAGLVAMAEGERVTGHWSAAAPMVAAARLA
                     INAIAGGG"
     gene            complement(2594..3700)
                     /locus_tag="VGA78_13565"
     CDS             complement(2594..3700)
                     /locus_tag="VGA78_13565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894952.1"
                     /translation="MTGVDLSLPYRVPLSWLLKHGSESVQLRSVRELAPPGQPGAEAL
                     EAAVVESKPVHEITKRQADNGSWGGNLLGIAASVRDGIKEPGTIAQYRRLLQLAYPKT
                     GRAFKLADRLLFRLLSRDDDPVLLFEFHKLARESPATEEWVRERNREAATAALAEGGH
                     PEDPRVRGAAHKIASAVSAFLRSPLADKPWARTGGSTILHPEAHPPTWYSLAMLAAMP
                     SLQRERAGFTERLGQYLSIHAPKKTYSIQVGKKLIKPSDILLGDPTEADARGHVDDIP
                     LALHFYEQLARLGMLAGSPLGAKVLTRLEGERDELGVWHPKKLTAGPKSSHRAAYHTY
                     PLCGNTKLPDCRVADVTFRLALIAKLAGRPLEYS"
     gene            complement(3751..4650)
                     /locus_tag="VGA78_13570"
     CDS             complement(3751..4650)
                     /locus_tag="VGA78_13570"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9894953.1"
                     /translation="MRRRLAVILVLPLVLLRGSETERPTPPHYAEWLEADGIRLRAIR
                     AGTGDTTLVFLHGYGEHLLTWRSVIDPLARNYRILAIDLPGFGGSDKPDRSYTLDAMV
                     TTVRAVLARWTDPPVIMVGHSMGGAIAAATTSLEPGRVVAVVLIAPAGIDIALGGVID
                     SMSQRRSTLIGLWEAARASVIPMHDPDWLGEPRKQARYDPALDPAFRTAAARILRDFQ
                     FEGMAARYYGLKVPTLLLWGAIDPVVPVAVADTLAKFLPCYQLAVLSRTLHRPQVERP
                     DTVVTILKHFLSQPGCSPLSTFQ"
     gene            complement(4660..6432)
                     /locus_tag="VGA78_13575"
     CDS             complement(4660..6432)
                     /locus_tag="VGA78_13575"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEX9894954.1"
                     /translation="MRLLTLLVPIFAGSLAAQRPAGPPQALAIASGDWPMAARDYAAT
                     RFSPLTELKPENVAGLKVIWTFATGSLRGHEGNPLVVGGRLYLHTPHPVTLYAFDLDR
                     PGSPPLWKYAPRSRDPAPFVCCDGTSRGIAWHPSGKLYVPLVPGDLAAVDAASGREIW
                     RVRNGDPAQGLTMPAAPLVIGDVVVVGVAGGEFGARGYLSGYDAATGKLLWRAYSTGS
                     DREVLLDGPVNTASPAQAGADLGLSTWPADAWRRGGGATWGWLSYDPELDLLFHGTGG
                     AAPLNPVQRIGDNKWTSTLFARDPRTGHARWALQLTPRSGFSFDASNESVVADLTLQG
                     RSLKSLVHFDHNGFVYTIERATGRIQRAEKYGPVNWARGVEAATAVPNLEPSWSVVPG
                     QPLQGVCPSIMGLKGLQPAAYSSPLSLFFVPVNNVCMDYLVTPATFTAGRPFLGATIR
                     LTAGPGGHSGRFIAWDAARSTLAWEVREPFPVLSGALVTATGLAFYGTVDGWLKAIDA
                     RNGSEVWRFRTPSGNIGNPITFSGPDGKQYLAIVSGVGGWAGAAFARAATPRANDPLG
                     AAALFRDLPRVTNPGGVLLVFGLP"
     gene            6471..6707
                     /locus_tag="VGA78_13580"
     CDS             6471..6707
                     /locus_tag="VGA78_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:6501..6503,aa:Sec)
                     /transl_table=11
                     /product="SelT/SelW/SelH family (seleno)protein"
                     /protein_id="HEX9894955.1"
                     /translation="MKASITYCVVUDYEPRAVRVAAELREAFPEIEVTLLPSSGGVFD
                     VAVDGTLVFSKKQVRRHAEPGEIAEAARRRGLAG"
     gene            6740..7876
                     /locus_tag="VGA78_13585"
     CDS             6740..7876
                     /locus_tag="VGA78_13585"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEX9894956.1"
                     /translation="MKIAITTGGGDAPGLNAVIRAVVLSAHAKGWSCFGILRGFGSLL
                     ERGDREGDVWVGPERRKVAFAHGLMPLGPADVRGITHLGGTILGASNRGNPFRWPSQD
                     AAGNPVETDRSDELIEAFRRAGIDALVVIGGDGSLSIAHDLAAKGMHVVGVPKTIDND
                     VWGTETTFGFDTAVSTATEAIDKLVSTAQSHDRVMVVELMGRYAGWIALHSGISGSAD
                     VILIPEIPFDIEKVCQTIRDREAQGQRYGIVVVAEGARPLGGSLVIQEPGRAGRAERL
                     GGVGAQVSEAIAERTGKETRLLVLGHLQRGGSPTTFDRLLALRFGAAVVRAIMDGAFG
                     SVVVYTPPNVGRVSLAEVVGRSRLVPLDSGVIMTARALGISFGD"
     gene            7879..8475
                     /locus_tag="VGA78_13590"
     CDS             7879..8475
                     /locus_tag="VGA78_13590"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX9894957.1"
                     /translation="MAEKAALRRDLLARRDLIPGRESRSEAIAARLRTLVEYRIATVL
                     SAYVGVGGEVATAGIIESIFQRGLPVAVPWVDGDHLRLTAVTSLDQLEAAPFGLLEPP
                     PALKESTASRVDPAGVHLYLVPGLAFDRQGGRLGYGRGYYDRLLGEAGPGPLRIALGF
                     EAQLVNRVPMTVRDQPMDLVVTEAAVYRVSARTASAVR"
     gene            complement(8444..8791)
                     /locus_tag="VGA78_13595"
     CDS             complement(8444..8791)
                     /locus_tag="VGA78_13595"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX9894958.1"
                     /translation="MTRVERTYSEAEILAQLRELPGWSFHDGAIRRGFATDGWPSTML
                     VVNAIAFACEAAGHHPDLSVSWSKVEVALWTHSAKGITEKDFETAALIERTILWGPDP
                     ESSLSGPPKPFVR"
     gene            complement(8788..9312)
                     /locus_tag="VGA78_13600"
     CDS             complement(8788..9312)
                     /locus_tag="VGA78_13600"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-pyruvoyl tetrahydropterin synthase family
                     protein"
                     /protein_id="HEX9894959.1"
                     /translation="MSPFQVTVAKESLGFSAAHFLTLPGHMCERLHGHNYRVAVTVYG
                     AVDPATGFVVDFAVLKRVVRGLIEPLDHRVLVPGRNPRLRLHQEPGRLVVDYGERAGW
                     LVLPREHACVVPVSNTTAELLAQWLGEQVGVALAREGAPGITQLVVELEESTGQTASV
                     TVPGEDHRPRVEAQ"
     gene            9477..9974
                     /locus_tag="VGA78_13605"
     CDS             9477..9974
                     /locus_tag="VGA78_13605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894960.1"
                     /translation="MRIPALMTAGALALLPARSDAQVSGTIVIGGGPVGGVVTFGQPV
                     IVRPRGGRVVVVERYAPHPRVIVVERWRKPKHHQRHFARRVVYYDRGAHVFYDRYRPG
                     LIEVAVFFNDGRFYRDYDDVRGYRDRGRYDDRYRHRDGDRDRDRERERDRDRYRDRDW
                     DRDRR"
     gene            10140..10769
                     /locus_tag="VGA78_13610"
     CDS             10140..10769
                     /locus_tag="VGA78_13610"
                     /inference="COORDINATES: protein motif:HMM:NF025946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX9894961.1"
                     /translation="MITTLLVAACAAVESPPAPADSLVALYERGRTFAEFLAAATRRR
                     ETWLKNAAWGQLDGELLARVRALASSWRILVVAADWCGDSANTIPYLATFADSSGGKL
                     HIRIVAPDDGQWVMERHRTSDGRAATPTVVVLDAEGTEVGCWVERPSALASMMREQRA
                     KLSQDDLLKQKYAWLDGDRGKSTVREILDQIEHAAPGQSCGGNARHGEQ"
     gene            complement(10881..13433)
                     /locus_tag="VGA78_13615"
     CDS             complement(10881..13433)
                     /locus_tag="VGA78_13615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX9894962.1"
                     /translation="MRFAAAALLLLAARPAAAQDPRIEPVLVELRVGRLASRTVPAHR
                     VGEHALLPVLQLFELAEMRAEWRADGDVVTMLQPGNRRVTISPSRRRLEVRGRSRDLA
                     PTEFLIQEEQLYLSTAVLEQTLGIRFELSWNDLEVTVLESDNLPIGRRYRRAALAAAR
                     LLSRDSTTADGRLEERRWPLDGIIADYSMLVPTNPGPKAGAYNLTLGFALLDGAFLAG
                     VQNQGPLDEGTARFDVSWTGVWRENPWLAQLRLGDGFSSGPRTRAVRGISFGNVPFRR
                     PAILGQLPFTQTLGPGWEVEAYRGGRLLSFDSVNALGQFSLDVPIQYGDNPVDFIAYG
                     PFGEVRQFNRTYRVSADVIPAGRFEYAISAGACRRLAPCGATANLDLRLGVAQRITAF
                     AGYDRFWRDTLPDLSHPYAGIVAGLSNSVVAEAEVVGSALTRGSLRFEPSHNLQLIAE
                     ATHFAQDLIQPILTAPGRRNQLTLYGQARPFRGPLSKWMVVDAAIDRITTLDATVTSA
                     RLGGSFQTGQMRLIPAVRWERTAPDSAASFSRTSWGLNTIVLPVRRLGSFAGSITARA
                     GIEFETPARARGANGFLSKSLSRFIRLELGGSWLSGQRASLLAFFAADLPQARAYTTL
                     ERTPAGGTSASQFVQGSVLYDAAWQRVVLNAGPSAQQSGVSGRVYLDRNQNGRYDESE
                     YVLPDVEVTVGLFSQRTDQRGEYRIWPIPAYDPVVAAVDTATLASPLWLPAFGGIELR
                     PVPNRFTKLNIAVLSGGVIEGRLVRASPDGDIPIAGADLILRHRATGRERRITTFRDG
                     SFYALSIRPGEWDVAVDPELLTRMRRQADPLQFTIPQLVEGATISGLLLRIR"
     gene            complement(13430..>13733)
                     /locus_tag="VGA78_13620"
     CDS             complement(13430..>13733)
                     /locus_tag="VGA78_13620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894963.1"
                     /translation="ARIETDSVVVRGRLARTGRAAYLGTVRGTLTSADGKVAGRFDEA
                     VSVYYEIDPRFTLPRSGLRPGRYRLTVEVASERSDIAPDQVLKAPTTRQTIDFVIP"
BASE COUNT         2330 a         4538 c         4670 g         2195 t
ORIGIN      
        1 aagccaaagg gccgattctc ctgttcgtcg gcccccccgg cgtcggcaag acctcggtcg
       61 ccaagtccat tgctcgcgcg atgggccgta agtacgtccg catttccctt ggcggcgccc
      121 gggacgaagc cgatatccgg ggccaccggc gtacctacgt cggggccatg ccgggtcgca
      181 tcatccaggg gctcaagcag gccggatcca agaacccggt cttcctgctc gatgaagtgg
      241 acaagctggg agtgtctttc cagggcgacc cggcgtcggc cctgctcgag gtgctggacc
      301 cggcccagaa cgactcgttt accgatcact acctcggggt cccgttcgac ctgagcgagg
      361 tgctgttcat cgcgacggcc aactacatgc agaacattcc cggaccgctg ctcgaccgga
      421 tggaagtggt cgagttcacc ggctataccg aacgggagaa gctggagatc gccaagaagt
      481 acctggtgcc gcgccagttc accgagaacg ggttgtcaat cgagcagcta gggctgaccg
      541 atgaggcgat caccgagatc atcgaggggt acacccgcga gtcgggcgtc cggcagctgg
      601 agcgggagct gggcaagctc tgccgcaagg tggcccggaa gctcgccgcc aaggaggtcg
      661 agcgggtcgc ggtcgacaag gcgatggtgg acgacctgct gggccggccc aagatccacc
      721 cggaacagaa gctgttggaa gacgaggtcg gcgtcgcgac cgcgatgtac tacaccccgg
      781 tgggcggcga catcatgttc atcgaagcca gcaccatgaa gggcaagggc gagctggttc
      841 tcaccggcca gctgggcgag gtgatgaagg agtcggcccg ggccgccctg acctacgcca
      901 aggcccacgc cgcggcgctc cgaattccgg aggacatgtt cgaccgggag gtccatatcc
      961 acgtgcccgc cggcgcggtt cccaaggaag gtccctcggc cggcgttacc atggccaccg
     1021 cgctgatttc agcgctgtcg ggccgaccgg tcagacacga catcgccctg accggcgaaa
     1081 tcaccctgcg cggccgggtg ctcccgatcg gcggtctcaa ggaaaaaatc ctcggcgccg
     1141 tgcgggccgg cattacccgg atcgtgatcc ccaaggagaa cgagccggac ctggaggacc
     1201 tgcccgaaga agtgaagaag cggatcgatg tcttcccggt gcaggagctg ggcgaggccc
     1261 tggcgctcac gctgcgtgga gcgtcgttcc gcgaaggcag gctgctgttc ggaaacgaag
     1321 agccgagcgt cgtggtaccg ctgacgccga cgtttccaca ctaacgaagt cgaagaagtc
     1381 gaaggagtcg aaggagtcga aggggatcgc aagaggttac gcttcgacac cttcgactgc
     1441 ttcgaccgtc ttcgacggca tttccgccgc taggcggaaa tgcccggtcc cgtcggtccc
     1501 tgctcgaagg cccaccgcag ctggtccagg gcccgcttga gacgccctct ggcctcggcg
     1561 cctcggtggg gcttggtggc gagccactgc tcggtcaacc gacagaccga gctcaccagc
     1621 tcaaacccgt acgcgccggc cgacccgctc aagcggtgaa acaaggtgac cagcggcacg
     1681 ctgggctccc tgccgctcag ccacaggttc gccgccgcat tcagctcctc gagccgagcc
     1741 ggtacttcgg ccaggtactc gcttcggagc cgagtcatga gctggtcgag ggattcgtgc
     1801 tccaccgttc agccgcctcc ggcgatggcg ttgatggcga gccgggccgc ggcgaccatc
     1861 ggcgccgccg cgctccagtg accggtgacc cgttccccct ccgccatggc cacgaggccc
     1921 gcgtgctcgt ctaccaccgc cagcaccggt cgtcccggcc agagaccctg aatccggcga
     1981 acctcgatcg gcacggaatc ggaagccgcc ggctcgtccg agaacagggc cagcttcact
     2041 ccccctgcag cggcccgccg caccgcgggg atgagcatgg gccaggcctt cgacggaagc
     2101 accgccgcaa cctcccgccg ggctcgcgcg atctcgaggg tcagcagttg gcccacgccg
     2161 cggagcgagc tgacttccac cagagtggac gaggccggtg cgacgacctc ttccagtgag
     2221 cgggacagct cttcaatggc gcgtgattgc cggtccacga tccgtcccag cagcagcgaa
     2281 ggcggctccg gccggtagcg tctgggcctg ccctcctcag ccctcgccgc ccccttgctc
     2341 accagagcct ccaacgcggc gtaggcattc gcccgggcca gccccgccgc ccgcgctact
     2401 gcgtagccgg tgcccggacc ccgggtcacc agcacttcgt aaatcaggga ttccgtgggc
     2461 gtgaaatcga agggagtgag atcaagcatc atctagtagt atcattcgct acaacgcccg
     2521 tcaagcagcg gacgccccct gctcccctct ccctgcttcc tgctccctgt tacctgctcc
     2581 ctgctccctg gttttacgag tactcgagcg gacgacccgc caacttcgcg atcaacgcca
     2641 gccggaaggt gacgtctgcc acccgacagt caggcaactt ggtatttcca cagagcggat
     2701 acgtatggta ggccgcgcgg tgagaggact tgggtcctgc ggtgagcttc ttggggtgcc
     2761 agacaccgag ttcatcgcgc tcgccctcca gccgcgtcaa taccttggcg cccagcgggg
     2821 agcctgctag catccccagc cgagccagtt gctcgtagaa atgaagtgcc agggggatgt
     2881 catccacgtg ccccctggca tccgcctcgg tcggatcccc gagcaggatg tccgagggct
     2941 tgatcagctt ctttcccacc tggatgctgt aggtcttctt gggcgcgtgg atagacaggt
     3001 attggccaag ccgctcggtg aagccggccc gctcccgctg caggctgggc atggccgcga
     3061 gcattgcgag cgaataccag gtcggtgggt gtgcttccgg atggagaatg gtgctcccgc
     3121 cggtccgggc ccagggcttg tcagcgagcg gactgcgcag aaacgcggac acggcggagg
     3181 caatcttgtg ggcggcgccg cggacccgtg ggtcttccgg gtgccctccc tccgccagag
     3241 cagccgtggc ggcctcccgg ttacgttccc ggacccattc ctcagtcgcg ggagattcgc
     3301 gagccagctt gtggaattcg aacaggagaa ccgggtcgtc gtcccgggaa aggagccgga
     3361 agaggagccg gtcagccagt ttgaacgccc gaccggtctt ggggtaggcc aactgaagca
     3421 gccggcggta ctgcgcaatt gtgccaggtt ccttgatgcc atcccgcacc gaggcagcga
     3481 tgccgaggag attgccaccc caggagccgt tgtccgcctg tcgcttggta atctcgtgga
     3541 cgggtttgga ctcgaccacc gcggcttcca gggcttcggc cccgggctgg ccgggaggcg
     3601 ccagctcccg gaccgaccgg agctggacgc tctcgctgcc gtgtttgagc agccaggaga
     3661 ggggcacccg gtacggcaac gagaggtcca cgccagtcac cctctctgca tagggataaa
     3721 aagcgtggcc aagataccaa gacagtgtcg ttactggaaa gtggacagcg gcgagcagcc
     3781 tggttggctc agaaaatgtt tcaaaatggt cacaactgtg tctggacgtt ccacttgggg
     3841 acggtgcaga gtccgactta gcaccgctaa ctggtagcag gggaggaact tggcgagcgt
     3901 gtccgccacc gctacaggca ccaccgggtc tatggcgccc caaaggagca gggtgggtac
     3961 cttcagcccg tagtagcgag ccgccattcc ctcgaattga aagtcgcgga gaattctcgc
     4021 cgcagcggtc cggaaggccg ggtccagggc cgggtcgtac cgggcttgct tccgtggctc
     4081 gcccagccag tccgggtcgt gcatcggtat gactgaagca cgggcagcct cccacagccc
     4141 aatcaatgtc gagcgacgct ggctcatcga atcgatcacg ccgcccaggg cgatatcgat
     4201 tcccgccggt gcgatcagaa ccacggccac cacccgcccc ggctccaggc tcgtggtcgc
     4261 agcggcgatg gcacctccca tcgagtgccc caccatgatc accgggggat cggtccagcg
     4321 cgcgagcacc gcgcggactg tcgtcaccat cgcgtcgagg gtataggagc gatcgggctt
     4381 gtcgctcccg ccgaagccgg gcagatcgat cgccaggatc cgataattgc gtgccagcgg
     4441 gtcgattacc gagcgccagg tcagcaggtg ctccccgtag ccgtggagaa acaccaaggt
     4501 cgtatctccg gtcccggccc ggatggcccg cagccgaata ccgtccgcct cgagccactc
     4561 ggcgtagtga gggggggtgg gccgctcggt ctcgctgccc cgaagcagca ccagcggcag
     4621 gaccagtatg accgccagcc tacggcgcat cgggcgcgct cacggcagcc cgaacaccag
     4681 cagcacgccg cccgggttcg tgaccctagg gaggtcgcgg aagagggcag ctgctcccaa
     4741 gggatcgttg gctcgcggag tggcggccct ggcaaatgcc gctccggccc atccgccgac
     4801 accggaaacg atggccagat attgctttcc atcggggccg gagaaggtga tggggttgcc
     4861 gatattccct gacggggtgc ggaagcgcca cacctcactg ccgttgcggg catcgattgc
     4921 cttgagccag ccatccacgg tgccgtagaa cgccaacccg gtagcggtca caagtgcgcc
     4981 gctcaacacc ggaaacggct cgcggacctc ccaggccaat gtgctcctgg ccgcatccca
     5041 ggcaatgaac cggccgctgt ggccgcccgg tcccgcagtc aagcggattg ttgctccgag
     5101 aaagggacgg ccggccgtga acgtagccgg ggtcaccagg taatccatgc agacgttgtt
     5161 gaccggcacg aaaaacagcg agagcgggga tgagtacgcc gcgggttgaa ggcccttcaa
     5221 tcccatgatc gagggacaca cgccctggag cggctgcccc ggaaccacgg accagctcgg
     5281 ttccaggttc ggtaccgcgg tcgccgcctc cacgccccgg gcccagttga ccgggccgta
     5341 tttctcggcg cgctggatcc gtccggtagc gcgctcgatg gtatagacga atccgttgtg
     5401 gtcgaaatgg accagcgatt tgagcgatcg tccttgcagc gtgaggtcag ccaccacgct
     5461 ctcgttggag gcgtcgaagc tgaagccgct cctgggcgtc agttgcaggg cccagcgggc
     5521 atgtccggtc cggggatcgc gcgcgaacag agtcgaggtc cacttattgt cgcctatcct
     5581 ttgcaccggg ttcagcggtg ccgcgccacc ggtcccgtga aacagcagat cgagctcggg
     5641 atcgtagctc aaccagcccc aggtggcgcc tccgccccgc cgccaggcgt cggccggcca
     5701 ggtcgacagc cccagatcgg ctccggcctg cgccggtgag gcggtgttca ccggcccgtc
     5761 cagcaggact tcccggtcgc ttccggtgga atacgctcgc cacagcagct tgccggtggc
     5821 ggcatcgtac ccgctgagat atcctcgggc cccgaactct cctccggcga ctccaacgac
     5881 cactacgtcg ccgatcacca gtggcgcggc cggcatcgtg agcccctgcg ccgggtcgcc
     5941 gtttctcacc cgccagatct cccggccgct ggccgcatcc acggcagcga ggtcccccgg
     6001 aaccagcggc acgtacagct tgccgctggg atgccaggcg atgcctcggc tggttccatc
     6061 gcagcagacg aagggagccg ggtcgcggga gcggggcgcg tacttccaca ggggcggact
     6121 gcccggccgg tcgaggtcga aggcgtacag cgtcaccggg tgaggggtgt gcaggtagag
     6181 cctgccaccg acgaccagcg gattgccttc atggccccgc agcgacccgg tcgcaaaggt
     6241 ccagatcacc ttgagtccgg ccacgttctc gggtttgagc tcggtgagcg gactgaagcg
     6301 ggtcgcggcg tagtcgcggg ccgccatggg ccagtcgccg gaggcgatgg cgagcgcctg
     6361 gggtggtcct gccggtcgtt gcgcggccag cgagccagcg aagatcggga ccaggagggt
     6421 cagtaaccgc atggactgga agctagtgac tactgactat tattcgcccc atgaaagcca
     6481 gcatcaccta ctgcgtcgtc tgagattacg agccgcgggc cgtccgggtg gcggccgagc
     6541 ttcgggaggc gttccctgag atcgaggtca cactgctgcc gtcaagcggc ggggtgttcg
     6601 atgtcgcggt cgacggcact ctggtcttct cgaagaagca ggtgcgccgg cacgcggagc
     6661 cgggtgagat cgccgaggcc gcgcggcgtc gcgggctcgc cgggtaggga gccgctcgcg
     6721 actggtgact cgtgactcca tgaaaatcgc cattaccact ggcggtggtg atgcacccgg
     6781 gctgaacgcg gtcattcgcg cggtggtatt gtccgcccac gccaagggct ggagctgctt
     6841 cggcatcctg cggggcttcg gcagcctgct cgagcggggt gatcgtgaag gggacgtgtg
     6901 ggtggggccg gagcgccgga aggtggcctt cgcccacggc ttgatgccgc tcgggcccgc
     6961 tgacgtgcgc ggcatcaccc atctgggcgg caccatcctt ggcgcctcca atcgaggtaa
     7021 tcccttccgc tggccgtccc aggatgccgc cggcaacccg gtcgagaccg accgctccga
     7081 cgagctgatc gaagcgtttc ggcgggccgg catcgacgcg ctggtcgtca tcggcggcga
     7141 cgggagcttg agcatagcgc acgacctcgc cgccaaggga atgcacgttg taggcgtgcc
     7201 caagacgatc gacaacgacg tctggggcac cgaaaccacg ttcggcttcg acactgccgt
     7261 cagtaccgcc accgaagcca tcgacaagct ggtctccacc gcccagagtc acgaccgggt
     7321 catggtggtg gagctcatgg gtcgctatgc gggatggatc gcgctgcaca gcggtatttc
     7381 cggaagcgcc gacgtcatcc tgatccccga gatcccattc gacatcgaga aggtgtgtca
     7441 gaccatccgg gaccgggaag cccaaggcca gcgctacggc atcgtggtgg tggccgaggg
     7501 agcccgtccg ctgggcggtt cgctggtgat tcaggagccg ggccgcgccg gacgggccga
     7561 gcgattgggc ggagtggggg ctcaggtgtc ggaagccatc gcggaacgca ccggaaagga
     7621 aacccgcctg ctggtgctgg gccatctgca acggggcggc tcgccgacca cgttcgatcg
     7681 cctgctcgcg ctgcgcttcg gcgcggcggt ggtgcgggcc atcatggacg gggcattcgg
     7741 atcggtggtg gtgtacaccc cgcccaatgt cggccgggtt tccctggccg aggtggtggg
     7801 acgcagccgc ctggtgccgc tcgatagcgg cgtcatcatg accgcccgag cgctcggaat
     7861 cagcttcggc gattgagcgt ggcggagaag gccgcgctgc ggcgggatct gctggcccgc
     7921 cgggacctga tccccgggcg ggaaagccgg agcgaagcga tcgctgcgcg tttacgcacg
     7981 ttggtggagt accgcatcgc tacggtgctc tcggcctacg tgggagtcgg gggcgaggtc
     8041 gccactgcgg ggatcatcga atcgatcttc cagcgcgggt tgccggtggc ggttccctgg
     8101 gtcgacggtg atcacttgcg gctcaccgcc gtgacatccc tggatcagct cgaggccgcg
     8161 ccttttggcc tgttggaacc gcccccggcg ctcaaggagt ccaccgcatc ccgggtcgat
     8221 ccggcagggg tgcacctgta tctggttccg ggcctggcgt tcgaccgcca gggcgggcga
     8281 ctgggctatg gccgaggcta ctacgaccgg ctgctgggtg aggccggccc gggcccgttg
     8341 cgaatcgcgc tcgggttcga agcgcaactg gtgaatcggg taccgatgac ggtgcgggac
     8401 cagccgatgg acctggtagt gaccgaggcc gcggtctacc gggtcagcgc acgaacggct
     8461 tcggcggtcc gctgagggaa ctctcggggt ccggacccca gagaatggtg cgctcgatca
     8521 gggccgcggt ttcgaaatct ttctcggtga ttcccttggc gctgtgagtc caaagcgcca
     8581 cttccacttt gctccagctg acggacagat ccggatgatg gcccgcggct tcgcaggcaa
     8641 aggcgatcgc attcaccacc agcatggtgg aaggccagcc gtcggtggcg aagccacggc
     8701 gaatcgcccc gtcgtgaaaa ctccagcccg gcagctcccg caactgggcc agaatctcgg
     8761 cttcggaata ggtccgctcc acccgggtca ttgggcctcc acccttggtc ggtgatcctc
     8821 acccggcacc gtgacgctcg ccgtctggcc ggtgctctcc tccagctcga ccaccagctg
     8881 tgtgatgccc ggcgcgcctt cccgcgccag tgccacgccg acctgctcgc ccagccactg
     8941 ggccaggagt tccgccgtcg tgttgctgac gggcaccacg caggcgtgct cccggggcag
     9001 aaccagccat ccggcccgtt ccccgtagtc gaccaccagc cggccgggct cctggtgcag
     9061 ccgtaagcgg ggattgcggc cgggcaccag aacccggtgg tccagcggct cgatcagccc
     9121 ccgtaccacc cgcttgagga ccgcgaaatc caccacgaaa ccagtcgcgg gatcgacggc
     9181 cccatacacg gtcaccgcga cccggtagtt gtgcccgtga aggcgctcgc acatgtgacc
     9241 cggcagggtc aggaagtgcg ctgccgaaaa cccgagcgac tctttggcga cggtaacctg
     9301 gaagggggac acgtccggaa tatacgcggc cggtgtcctc ggacgttgag gcgaacgtcc
     9361 ggagcggatg acaaccggat cccgggagat gcgcggaaac ccatgggatt acgccagttt
     9421 gccgctggca cagcccctgc tcataggagc ggcggacact cgattcggag gatggtatgc
     9481 gaatacccgc tctcatgacg gccggcgctc tcgccctgct tcccgcccgg tccgacgccc
     9541 aggtcagtgg taccatcgtc atcgggggcg gaccggtggg cggcgtggtc accttcggtc
     9601 aaccggtgat tgtacggccg cggggtggac gggtggtggt ggtcgaacgg tatgcaccgc
     9661 acccacgcgt aatcgtggtg gagcggtgga ggaagcccaa gcatcatcag cgacatttcg
     9721 cccgccgggt ggtgtattac gatcggggcg cgcacgtgtt ctacgaccgc tatcgcccgg
     9781 gcctgatcga agtggcggtg ttcttcaacg acggacggtt ctaccgcgac tatgacgacg
     9841 tgcgcgggta ccgtgaccgc gggagatacg acgaccgcta ccgccaccgg gacggggatc
     9901 gggatcggga tcgggagcgg gagcgggatc gggatcggta tcgcgaccgg gactgggatc
     9961 gcgaccggcg gtaaagcagt gaacggtgaa cggtaacagt gaacggtcaa cagtaaacgg
    10021 gggctcccag cccccgtttg cgtttccgga attacgtttc agtcagggat cgccgatcac
    10081 cgttcaccgt tcaccgttta ctgttcactg ctcactgttc accgttcacc ggccagtcca
    10141 tgatcaccac ccttctggtt gccgcctgcg ccgcggttga gtccccaccg gccccggccg
    10201 actcgctggt cgcactctac gagcggggaa ggacctttgc cgagtttctc gccgcggcga
    10261 cgcggcgccg ggagacctgg ctcaagaacg cggcctgggg acaactggat ggggaactgc
    10321 tagctcgggt ccgggccctt gccagctcgt ggcggatcct ggtggtggcc gcggactggt
    10381 gcggcgattc cgccaacacc atcccttatc tggcgacctt cgccgactcg agcggcggca
    10441 agctccacat ccggatcgtc gctccggacg acggccaatg ggtgatggag cggcaccgga
    10501 ccagcgatgg acgggctgcc actccgaccg tcgtggtgct ggacgccgag ggcaccgagg
    10561 tgggctgctg ggtggagcga ccgtcggcgc tggccagcat gatgcgggag cagcgggcca
    10621 agctcagcca ggacgatctg ctgaagcaga aatacgcctg gctggacggg gatcggggga
    10681 agagcacggt gcgcgagatc ctggaccaga tcgagcacgc ggcgccgggt cagagctgtg
    10741 gcggcaacgc ccggcacggt gaacagtgaa cggtgaacag tgaacggtga gcggtaaacg
    10801 ttgagagtcc gctgcggtta ctgttgaccg ttcaccgttg accgttcccc gttccccgtt
    10861 ccccgttcgc cgttccccgt tcaccgtatc cgcaggagca gtccgctgat ggtggcgcct
    10921 tcgaccagct ggggaatagt gaactgcagc ggatcggcct ggcgccgcat ccgggtcagc
    10981 agctcaggat cgaccgccac gtcccattca ccggggcgga tgctcagcgc gtagaatgag
    11041 ccgtcccgga aggtcgtgat gcgtcgctcc cggccggtcg cccggtgccg cagaatcagg
    11101 tcggcgcccg caatcgggat gtcgccatcg ggagaggccc gcaccagtct gccttcgatc
    11161 actcccccgg acagaacggc gatgttgagt ttggtgaacc ggttgggtac cggcctgagc
    11221 tcgatcccgc cgaacgcggg cagccacagc ggcgatgcca gggtggcggt gtccaccgcc
    11281 gcgacgaccg ggtcgtacgc cggaataggc cagatgcggt actcgccccg ctggtcagtc
    11341 cgctgtgaga agagccccac tgtcacttcg acgtccggca gcacgtactc gctctcgtcg
    11401 tagcggccgt tctggttccg gtccaggtac acccggcccg agactccact ctgctgggcg
    11461 gagggcccgg cgttgagtac cactcgctgc caggcggcat catagaggac cgacccctgc
    11521 acgaactggc tggcggacgt cccgcccgct ggggtgcgct ccagcgtggt ataggctcgc
    11581 gcctggggaa gatccgcggc gaagaaagcc agcagactgg cgcgctggcc gctcagccag
    11641 gatccgccca gctccagccg aatgaaacgc gagagcgact tgctcaggaa cccgttggct
    11701 ccccgggccc gggcgggagt ctcgaattcg atcccggccc gggccgtaat gctcccggcg
    11761 aaggaaccca atcgccgcac cggcaggacg atggtgttga gtccccagga cgtccgcgag
    11821 aatgacgccg ctgaatcggg cgcggtgcgt tcccaccgaa ccgccggaat caggcgcatc
    11881 tgtcccgtct gaaacgagcc gcccagtcgg gcggacgtga ccgtcgcgtc caaggttgtg
    11941 atccggtcga tggccgcgtc caccaccatc cacttactca gcgggccccg aaagggtcgc
    12001 gcttgtccgt agagcgtaag ctgattgcgc cgccccggcg cggtcaggat cggctggatc
    12061 agatcctggg cgaagtgggt tgcctcggcg atcagctgga gattgtggga cggttcgaat
    12121 cggagtgagc cgcgggtcaa tgccgaaccg accacctcgg cttcggccac gacactgttg
    12181 ctgaggccgg ccacgatccc ggcgtagggg tgggacaggt ccggcagggt gtcccgccag
    12241 aagcggtcgt aacccgcgaa cgcggtgatc cgctgggcga ccccaagccg gagatccagg
    12301 ttggccgtgg cgccgcaggg ggcgagccgg cggcaggcgc cggcgctgat ggcgtactcg
    12361 aaccggccgg cgggaatcac gtccgcgctg acccgatagg tacgattgaa ttggcggact
    12421 tcgccgaacg gaccgtaggc gatgaagtcg accgggttgt ctccgtactg gatggggacg
    12481 tcgagggaga actgacccaa tgcgttgacc gaatcgaacg agagcagacg tccgccccgg
    12541 taggcttcca cctcccatcc gggcccgagg gtctgggtga agggcagctg ccccaggatc
    12601 gcggggcgcc ggaacggcac gttcccgaag gaaatgcccc gcacggcgcg ggtgcgaggc
    12661 ccggaggaga agccatcgcc cagccgcaac tgggccagcc acgggttctc gcgccagact
    12721 ccggtccagc tcacatcgaa ccgcgcggta ccttcatcca gcggtccctg gttctgcact
    12781 ccggcgagga atgcgccgtc cagcagcgcg aaccccagag tcaggttgta ggcgccggct
    12841 ttgggaccgg gattggtcgg gaccagcatg ctgtaatcgg cgatgatgcc gtcgagcggc
    12901 cagcgccgct cctccagccg tccgtccgcc gttgtggaat cgcgcgacag gagacgggcc
    12961 gccgccagtg ccgcccggcg ataacgccgc ccgataggca gattgtcgga ctcgagcacg
    13021 gtcacctcga ggtcattcca ggacagctcg aaccggatcc cgagggtctg ctccagaacc
    13081 gccgtgctca ggtagagctg ctcttcctgg atcagaaact cggtgggggc cagatcacgg
    13141 ctccggccac gcacttcgag ccgccggcgg gacggagaaa tggtgactcg gcgattcccc
    13201 ggctggagca tggtcaccac atcgccatcg gcccgccact cggcgcgcat ctccgccagc
    13261 tcgaacagct gcagtaccgg gagcagggcg tgctcgccca cccgatgggc cggcacggtg
    13321 cgggacgcca gccgccccac ccgcagctcg accagcaccg gctcgatgcg agggtcctgc
    13381 gccgcggcgg gcctcgccgc cagcaggaga agggcggcgg ccgcgaatct cacgggatga
    13441 cgaagtcgat ggtctggcgg gtggtgggcg ccttcagcac ctggtcggga gcgatgtcgc
    13501 tccgttcgct cgccacctcc accgtcagcc ggtagcgccc ggggcgaagc ccgctgcgcg
    13561 gcagggtaaa ccgggggtcg atctcgtaat acacgctgac cgcctcgtcg aatcggcccg
    13621 ccaccttgcc gtcggccgaa gtcagcgttc cccgtaccgt tcccagatag gcggcgcggc
    13681 cggtccgagc cagccgcccc cggaccacga ccgagtcggt ctcgatcctg gcg
//
LOCUS       DASWKS010000479         7204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2485806, whole genome shotgun sequence.
ACCESSION   DASWKS010000479 DASWKS010000000
VERSION     DASWKS010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2485806"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1539)
                     /locus_tag="VGA78_13625"
     CDS             complement(<1..1539)
                     /locus_tag="VGA78_13625"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF002868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0071897 - DNA biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX9894964.1"
                     /translation="MARFGGSAAGEHAVRLHELVDISRRVAATRARREKVQLLASLLG
                     RVTPDEIEVAVGFLVGWPRQGRLGVGWAALEQAKSEPPSLDATLELLEVDRSFARIKS
                     TSGKGSSAGRVVILRALFARALPEEHEFLIGLIMGELRQGALEGVMVEAVAQAAGIPA
                     ARVRRAAMLAGDLGKVALAALTRGEAGLAQYSVRLFQPLQPMLADSAENVAEALATLG
                     RAGFEFKLDGARVQVHRSGPDVAVYTRNLNDVTAAVPEVVEAALGLALSQVILDGEVL
                     ALDSAGRPLPFQLTMRRFGRKLDVERLRAELPVRPFFFDILLLDGEELLDQTYTERME
                     RLSSAVPPEQRVPQLVSDSVAEAEGFFSRALSQGHEGVMAKALEAPYEAGRRGKAWLK
                     VKRARTLDLVVLAAEWGHGRRRGTLSNLHLGARGDANGEFVMLGKTFKGMTDEMLAWQ
                     TGELLARETERDQYTVYVRPELVVEVAFNEIQESPVYTGGLTLRFARVVRYRPDKEPG
                     EADSF"
     gene            1760..4579
                     /locus_tag="VGA78_13630"
     CDS             1760..4579
                     /locus_tag="VGA78_13630"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9894965.1"
                     /translation="MAKVRLALADRYRVERVLGEGGMATVYLAEDLKHHRKVAVKVMR
                     PELAATLGSDRFLREVEIAAQLSHPHILPMYDSGDADGLLYYVMPYVEGESLHGRLRR
                     EGQLPLDEAMRLAREVAEALAYAHDRGIIHRDIKPANIMLSAGHALVADFGIARALGS
                     GGEALTRTGLAVGTPQYMSPEQATGASDVDARTDVYAVGSVLYEMIAGEAPFTGPTAQ
                     AIIARSLTEPPRPLAATRPGLSPQVEAVVKRALAKSPADRYATAKALADAMVTAMDTS
                     RAVPAASAIEADTGPSPALVWGLFGVTSAVALALVVILVKRLGLPAWAIGLAVGLLAF
                     GALVLVSTQRAERRRRQGQPTPGLARLLTWRNATIGGVLALGLWAVTATTFAARGSAA
                     GSGADAGVRLAILPFENRGAPDDGYLADGIADEVRGKLTGLPGFRVTARTSTDQYRQT
                     TKSLQQIGRELGVEYLLTATVRWARSGETGGRLQVVPELIAARTGEATWQQRFDADVT
                     DIFQVQNAIASRVAGALGVALGGDEQDQLAQRPTDNLAAWDLYLKGRALTANDPATLK
                     QRAGYFEQAAALDSTFGEAWAQLGMALSNLYFNGTPDPAIAARAKEAADQALAADPDG
                     AQSHAAMAGFHSAVQKDAARAEEEMLLALRAAPNDPEILTRAASVEQALGRWDDALAK
                     LERARRLDPRSVNTTAALRRVLTYLRRYPEALEVGNDALALAPADPNNIQAQAIVHLA
                     RGDLAAARTVIKSAPGSLGQPALVAYLATYMDLFWVLDDAEQRLLLRLPPSAFFDDPA
                     AWGSVFMQTWWLRGDQAKARAYADTARMAFEVQLRDAPNDPQLHVLYGLALAYMGRKE
                     QAISEGERAMAYQPLSRDAVNGAYGQHQLVRIYLMLGEPEKALDRLEPLLRIPYLLSP
                     GWLRIDPTFEPLKGHPRFERLLAAN"
     gene            complement(4618..5952)
                     /locus_tag="VGA78_13635"
     CDS             complement(4618..5952)
                     /locus_tag="VGA78_13635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894966.1"
                     /translation="MRPDDERIDALLRQLDHAPPAVTSEMVVARARAGGGWGRRAALI
                     MAALGLAGAAYAFPGSPLPEWARTAARRIKPGPIVSLPAPAPTQVPLAPLAGIAVAPG
                     RSLVILFTHYQAQGQVRVSLTDSARVLVQAPGGAATFTSEADRLVIDNPGTSAGFEIR
                     IPRAAARVEIRVRGARILLKQGPRVTVTNLRPVGSSGEQCQPTEDPMSSARISSALGV
                     AVALSLAGCDSTSPLEGSEDAAFKQELDLALCAPSQSGFSSSSTNPYFPIQVGKVWSY
                     EGEEDGELEELTITVLDDTEIVAGVTTRVVEEREKIDGKLVEVSRNYFAQAADGTVCY
                     FGEAVDIYQNNQVISHEGAWRADQPGNGPGIIMPASPTPGLKFQMEDAPGIALDEGLV
                     VGTGSVTVPAGTFTQTIRVREFNPLDGDKGYKWYAAGVGLIIDGPVKLIEYH"
     gene            complement(5942..6538)
                     /locus_tag="VGA78_13640"
     CDS             complement(5942..6538)
                     /locus_tag="VGA78_13640"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894967.1"
                     /translation="MDSPGVVQRDDVETSQIPRREDAAARADAARRFHDRFVELFDAN
                     FQRLYRYLDRLSGEAELAADLAQEAFLRLYRRGSLPDAPEAWLVSVAMNLLRNTKSTE
                     RRRRGLLTLNRGERSHSDPAPSPDESLASEHTRQRVRATIDRMPERERRLLLLSAEGF
                     SYRHMAQALDLNPASVGTLLARARRSFREIYGDEPDAP"
     gene            complement(6649..>7204)
                     /locus_tag="VGA78_13645"
     CDS             complement(6649..>7204)
                     /locus_tag="VGA78_13645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894968.1"
                     /translation="TGSGSSRGLTLDASLSAARYGVVASYGLQRVRFSTAESVFIPEH
                     GATQLLEGGVIVFPTATSSIRLGAVGLWGRRATALTGGLEFEACNLLDRGCEFGGSPR
                     ADRNGLGGTTLPAYFRVDLGLRQHWHIGLGGRDASIALFGTVTNLLGRKNLLSLGQDP
                     LVDGLFEVEMRPRAPLVVGLDWRF"
BASE COUNT         1165 a         2516 c         2391 g         1132 t
ORIGIN      
        1 aaagctgtcc gcttcgcccg gctccttgtc gggccgatac cgaaccaccc gcgcgaaccg
       61 gagggtgagc ccgccggtgt agaccgggct ttcctggatc tcgttgaagg ccacctccac
      121 caccagctcg ggccggacgt agacggtata ctggtctcgc tcggtctcac gggccagcaa
      181 ctcgccggtc tgccaggcca gcatctcgtc ggtcatcccc ttgaacgtct tccccagcat
      241 cacgaactcc ccgttggcgt caccccgggc acccaggtgg agattactga gcgtgccgcg
      301 gcggcggccg tggccccatt cggcggccag caccaccaga tcgagagtcc gggcccgttt
      361 gaccttgagc cacgctttgc cacggcggcc ggcttcgtaa ggggcctcca acgctttggc
      421 catgacccct tcgtggccct ggctcaacgc ccgtgaaaag aacccttccg cctcggcgac
      481 ggagtcgctc accagctgcg gcacccgctg ttccggcggg acggccgagc tcagtcgctc
      541 catccgctcg gtataggtct gatccagcag ctcttcaccg tcgaggagca ggatatcgaa
      601 gaagaacggg cgcaccggca gctcggcccg cagccgttcc acgtcgagtt tccgtccaaa
      661 gcggcgcatg gtcagctgga acggcagggg ccggccggcc gagtccagcg ccagcacttc
      721 gccgtcgaga atcacctggg aaagcgccag gccgagcgcg gcctcgacca cttcgggaac
      781 agccgcggtc acgtcattga ggttgcgggt ataaacggcc acatccggac cggaccggtg
      841 cacctggacc cttgccccat cgagcttgaa ttcgaaaccg gcccgcccca gcgttgcgag
      901 cgcctcggct acgttctccg ccgagtcggc gagcatcggt tgcagcggct ggaacagccg
      961 aacggagtat tgcgccagac ccgcctcgcc ccgggtcagg gcggccagcg ccaccttccc
     1021 cagatcgccg gcgagcattg cggcccggcg aactcgagcg gccggaatgc cggcggcctg
     1081 agccacggcc tcgaccatca cgccttcgag cgccccctgg cgcagctcgc ccatgatgag
     1141 gccgatgagg aattcatgct cctccggcaa ggcccgggcg aacagcgcgc gcaggatgac
     1201 gacccggccg gcggaggatc ccttcccgct ggtgctcttg atccgggcga aggatcggtc
     1261 gacttccagc agctcgagag tggcgtccag cgagggcggt tccgacttag cctgttccag
     1321 ggccgcccag ccgactccga ggcggccttg gcggggccac ccgaccagga acccgacggc
     1381 gacttcgatt tcgtcgggag tcacgcggcc cagcaacgac gcgagcagct gcaccttttc
     1441 ccggcgggcc cgggtggccg ccacgcgccg ggaaatgtcg accaactcat gcagccgcac
     1501 cgcatgctcc cccgctgccg atccgccaaa cctagccacc ttgcgccccc tcttcccgcc
     1561 ctgttcatta cagaggaggc ggtgcagtgc cgcctccctt ctctcccccg gggccaagaa
     1621 cctgaacgta tcttcgcgcg cctgtcccgc gtgccatact ccgttgccgg aggaggctct
     1681 gttttgcctc cactgcggca ccgccacacc cactgagccg ggcgttccgg cccgcaccgc
     1741 tcccaccgga gcctttgaag tggcgaaggt gcgactggcc ctcgcggatc gataccgggt
     1801 ggagcgggtc ctgggtgaag gcgggatggc cacggtgtac ctggccgagg acctcaagca
     1861 ccatcgcaag gtggcggtca aggtgatgcg gccggagctc gcggccaccc tcggctccga
     1921 ccgcttcctg cgcgaagtcg agatcgccgc ccagctgagt cacccgcaca tccttcccat
     1981 gtacgactcg ggcgacgcgg acggactgct gtattacgtc atgccgtatg tggaggggga
     2041 gtcgctccac ggccggctgc ggcgcgaagg gcagctgccg ctcgatgaag cgatgcggct
     2101 ggcacgggaa gtggccgaag cgctggccta tgcccacgac cgcggtatca tccatcgcga
     2161 tatcaagccc gccaacatca tgctgagcgc cgggcacgcg ctggtggccg acttcggcat
     2221 cgcgcgagcg ctcggatccg gcggtgaagc gctgacccgg accggcctgg ccgtcggaac
     2281 cccgcagtac atgagccccg agcaggccac cggcgcctcg gatgtagacg cccgcaccga
     2341 cgtgtatgcc gtggggagcg tgctgtacga gatgatcgcg ggcgaagccc cattcaccgg
     2401 cccgaccgcc caggcgatca tcgcccggag cctgacggag ccaccccggc cgctcgcggc
     2461 aacccgtccg ggcctctcgc cccaggtcga agccgtggtg aagcgggccc tcgccaagag
     2521 cccggccgat cgttacgcca cggccaaagc cctggcggac gcgatggtga cggcgatgga
     2581 cacctcccgg gccgtgccgg ccgcatccgc catcgaggca gacacgggac cgtcccccgc
     2641 gctggtgtgg ggtctcttcg gcgtgacctc ggcggtcgct ctggctctgg tcgtgattct
     2701 ggtgaaacgg ctgggtctgc cggcctgggc catcggtctg gcggtgggat tgctcgcctt
     2761 cggtgcgctg gtgttagtga gcactcaaag agcggaacgg cgtcgccgcc agggtcaacc
     2821 cactcccggt ctcgcccggc tgctcacttg gcgtaacgcc accatcggag gagtgctggc
     2881 gctgggactg tgggcggtga ccgccaccac cttcgccgct cgtggctcag ccgccggcag
     2941 cggagccgat gcgggtgtgc gcctggccat tctccccttc gagaaccggg gggctcccga
     3001 tgacggctac ctggccgacg gtattgccga cgaggtcagg ggcaaactga ccggtctccc
     3061 cggcttccgg gtgacggcgc gcaccagcac ggaccagtac cgccagacta cgaagtcgct
     3121 gcagcagatc ggacgcgagc tgggggtgga atacctgctg accgcgacgg tacgctgggc
     3181 tcggagcgga gagaccggtg gccggttgca ggtggtaccc gagttgatcg cggcccgcac
     3241 cggtgaggcg acctggcagc agcggttcga tgccgacgtg accgacattt tccaggtgca
     3301 gaacgctatc gcttcccgcg tggctggcgc gttgggcgtg gcactgggcg gcgacgaaca
     3361 ggaccagctg gcccagcgcc ccaccgacaa cctcgcggcc tgggacctgt acctcaaagg
     3421 ccgggccctc accgccaacg atcccgcgac cctcaagcag cgggccggct atttcgagca
     3481 ggcggccgcg ctcgactcga cctttgggga ggcgtgggcc cagttgggca tggcattgag
     3541 caatctctat ttcaacggca cgccggaccc ggcgatcgcc gcccgagcga aggaggcggc
     3601 ggatcaggca ctggccgccg accccgacgg agcccagagc catgccgcga tggccgggtt
     3661 ccactcagcg gtccagaagg atgctgcccg ggcggaagag gagatgctgc tggcgctccg
     3721 ggcggccccg aacgatcccg aaattctgac ccgggctgcc tcggtggaac aggccttggg
     3781 ccggtgggat gacgcgctgg ctaaattgga gcgggcccgc cgtctcgatc cccgctccgt
     3841 caacactacc gctgcgctcc gccgggtcct gacctacctc cggcgttacc ctgaagccct
     3901 cgaggtgggg aacgacgccc tggccctggc cccggccgat cccaacaaca tccaggccca
     3961 ggcgatagtc catctggccc ggggtgatct ggccgccgcc cggacggtga tcaagagcgc
     4021 tccgggatcg ctgggacagc cggcgctggt cgcctacctc gccacctaca tggacctgtt
     4081 ctgggtcctg gacgacgccg agcagcggtt gctgctgcgg ctgccgccct cggccttctt
     4141 cgacgatcct gccgcctggg gctcggtgtt catgcagacc tggtggttgc gaggcgatca
     4201 ggccaaggcc cgggcctatg ccgacaccgc gcgcatggcg ttcgaggtgc agctccgcga
     4261 cgctcccaat gatccccagc tccatgtgct ctacggactg gcgctggcgt atatggggag
     4321 gaaggaacag gccatctcgg agggcgaacg tgcaatggcg taccagccgt tgagccggga
     4381 tgccgtgaac ggcgcctacg gccagcatca actggtgcgg atctacctta tgttaggcga
     4441 gccggaaaag gcgctggatc ggctggaacc gctgcttcgc atcccctacc tgctgtcgcc
     4501 gggctggctc cggatcgacc ccacgttcga gccgctcaaa ggtcaccctc gcttcgagcg
     4561 actcttggcc gcgaactgat ccgtcgccgt cctacccggc gaggcccctg acctgaatca
     4621 gtgatattcg atgagcttga ccggcccgtc gatgatcagc cctacccctg ccgcgtacca
     4681 cttgtagcct ttgtccccat ccagtggatt gaactcccgg actcggatgg tctgggtgaa
     4741 cgtcccggcc ggcaccgtaa cgcttcccgt ccctaccacc aggccttcat ccagcgcgat
     4801 cccgggcgcg tcctccatct gaaacttgag cccgggagtg ggcgacgccg gcatgatgat
     4861 gccgggaccg ttgccgggct ggtcggcccg ccaggcgcct tcgtgtgaga tgacctgatt
     4921 gttctggtag atgtcgactg cttccccgaa gtaacacacg gtgccgtcgg ccgcctgcgc
     4981 gaagtaattg cgggagactt cgaccagctt tccatcgatc ttctcgcgct cctccactac
     5041 ccgggtcgtg accccggcca cgatctcggt gtcgtccagc acggtgatgg tgagctcctc
     5101 cagctcgccg tcttcttccc cttcgtagct ccacaccttg cccacttgga tcgggaagta
     5161 ggggttggtg gagctggagc tgaacccgct ctgcgacggg gcgcagagcg ccagatccag
     5221 ttcctgcttg aaggcggcgt cttcgcttcc ctccagcggt gaggtggaat cacagccggc
     5281 cagggacaac gcgacggcca ctcccaacgc gctgctgata cgggcactgc tcatcggatc
     5341 ctccgttggc tgacactgtt cgccggagga gccaaccgga cggaggtttg tgacagtgac
     5401 ccggggtccc tgcttgagga gaatgcgagc accccgcacc cggatttcga cccgggccgc
     5461 ggcgcgaggg atccggatct cgaagcccgc cgaagtaccc ggattgtcga tcaccagtcg
     5521 gtcggcctcg gaggtgaagg tcgcggcgcc gcccggtgcc tgcaccagca cccgggcact
     5581 gtcggtcagg gagacccgta cctgtccctg agcctggtag tgggtgaaga gaatcaccag
     5641 cgaccggccg ggtgcgaccg caatccccgc cagaggagcc agaggaacct gggtcggagc
     5701 cggcgccggg agtgatacga tcggaccggg cttgatccgg cgcgccgcgg tgcgagccca
     5761 ctccggcagg ggcgatcccg ggaaggcgta ggccgcgccg gcgagaccca gggcggccat
     5821 gatcaacgcc gcccgccgtc cccatccccc accggctcga gcccgggcca cgaccatctc
     5881 ggaggtcacc gccggcggcg catggtcgag ctgccgcaat agcgcgtcga tccgttcgtc
     5941 gtcagggcgc atcgggttcg tccccgtaga tctcacggaa gctgcgccgg gcgcgggcca
     6001 ggagagtccc gacgctcgcc gggttcagat cgagggcctg agccatgtgc cgataactga
     6061 acccttcggc gctgagcagc agcaggcggc gctcccgttc cggcatccgg tcgatggtgg
     6121 cccgcacccg ctggcgagtg tgctcgctgg ccagggattc gtcgggcgac ggcgccggat
     6181 cggaatggct cctctcaccg cgattcaggg tgagcagccc gcgccggcgc cgctcggtgg
     6241 acttggtatt gcgaagcaga ttcatggcga cgctgaccag ccaggcctcc ggcgcatcgg
     6301 gcagcgagcc ccgccggtac agccggagga acgcctcctg ggccagatca gccgccagtt
     6361 ccgcctcgcc cgacagccgg tcgaggtagc gatagagccg ttgaaagttg gcgtcgaaca
     6421 gttccacaaa ccggtcatgg aaccggcggg cggcatcagc ccgtgccgct gcatcctcgc
     6481 gccggggaat ctgcgaggtc tccacgtcgt cgcgctgcac cacgcccggg ctatccacgg
     6541 ccgacctcca tgaatggaac cgggaggacg cgggtttgtg acaggagatc cttcgctgcg
     6601 ctcaggatga cggccgctgc gctcaggatg accgccatca tcacagccct agaatcgcca
     6661 gtcgagcccg actaccaggg gcgcccgggg ccgcatctcg acctcgaaaa gcccgtcgac
     6721 cagcggatcc tggcccagcg acaggaggtt cttccggccc aggaggttgg tcacggtgcc
     6781 gaagagcgcg atcgaggcgt cgcgtcctcc gagcccgata tgccagtgtt ggcgcagccc
     6841 gaggtccacc cggaaatagg ccggcagggt cgtcccgccc agcccattcc gatcggcgcg
     6901 ggggctgccg ccgaattcgc atccccgatc gagcaggtta caggcctcga actcgagccc
     6961 tccagtgagg gcggtggcgc gacgtcccca gagcccgacc gcaccgagcc ggatcgagga
     7021 ggtggcggtc gggaagacga tcacaccgcc ttccaggagt tgggtcgctc catgttcggg
     7081 gataaaaacg gattccgcag tggagaagcg gacccgctgt agcccgtagc tggcgacgac
     7141 gccgtagcga gccgcactca gcgaggcatc gagcgtgagg ccgcgtgagc ttccggaacc
     7201 ggtg
//
LOCUS       DASWKS010000480         3706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2850544, whole genome shotgun sequence.
ACCESSION   DASWKS010000480 DASWKS010000000
VERSION     DASWKS010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3706
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2850544"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..3466
                     /locus_tag="VGA78_13650"
     CDS             239..3466
                     /locus_tag="VGA78_13650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894969.1"
                     /translation="MVAPILAAALLCVAALPVSAQRRNQPQESKPVFDPAWYSQLKLR
                     HIGPEGNRVSAVAGVPGDPLVYYAGAASGGIFKSSDGGVRWEPIFDSQPVSSVGAIAV
                     APSDHSVVWVGTGEPFIRSNISLGWGVFRSTDAGKTWSRAGLELTGRIGRIAVDPRNP
                     DVVLVAALGHGYGPQPERGVYRTADGGKTWDRTLFVNDSTGAIDVMMNPVNPRIAYAA
                     TWQLNIHTAGRTSGGAGSGLWKSTDGGITWSRLTGSGLPAKPFGKVGLGISRSNPNRV
                     YALIETSDGVPFPGFEPERGELWRSDDAGATWQVVSYDRQLAGRTQYYTRMAVAPDNE
                     NEAYFAAADWSRTYDGGKTTIDATGIETPGYDHHDIWIDPANGNRMAVGHDGGISISW
                     NRGRSWHQVQLPIAQMYHVTVDNQIPYYVYGNRQDGNSARGPSNSKFSVFGSESGIPR
                     GEWRSVGGGESGWATPDPEDPNLVWSSASGFGSLGGIVARHDLRTGMTHNVEVWPMMT
                     RGWPAADLKYRFYWTFPLTISPHDRNRVYVGSQHVHLTIDGGRSWRELSPDLTRNEKT
                     RQVSSGGLTPDNIGVEYAGVVMAIAESRLKAGVIWAGTNDGLVHLSQDGGSSWTNLTA
                     NITGLLPWGTISNIEPSRFEAGAAYLTVDGHQVNNRDPWAYRTSDFGKTWKLIVNGIP
                     KTPLSYAHFVKEDPVRRGLLYLGTENALYLSFDDGDNWQPLQNNLPHAPVHGIALQEH
                     FSDLVLATYGRGFWILDDVTPLRQLHPTLTSQDAALFAPRPAYRLRQVEPAWSPLYDP
                     AAGANPPYGASLQYWLKAEEKDTVRLEIVDRSGTVVRKLTGTGQAGINRVWWDLRFDP
                     PKAAKLRTPPLHAPEITVTAEGRASFDQFPLTLLAPPGNYSIRLKTGGKEYSQALELR
                     KDPNSGGSDAEITQQMELLRQISGDLQAAVEMINALENIRHQLAALRITLSDDTARAA
                     VRNDADSLNQKAIAVEQELVELRLTGRGQDLIRYPVRIAGRLAYLGGDLGGSDYAPTA
                     QHRAVHSELRSQLEAVRRRFDEFLARDVAAFNAVLAQRGMNGIFR"
BASE COUNT          670 a         1252 c         1216 g          568 t
ORIGIN      
        1 ccagggcctg ccgctcgacc acgcgctgca gcaggtcggc gcccgactcg acgccggggc
       61 caccgacgaa cagctcctcg cgctcaaaaa cgagcttcgt ctgggaatgg ggcgcgctag
      121 aaactgaagg caggatgcag aatgcagagt gcaggatgca gaggtgaacc ccttcggcat
      181 tctgcattct gcactctgca tttagattcc cccatccacc ccccggagtt tcgccctcat
      241 ggtcgcccct attctggccg ccgcgctcct ttgcgtggct gcgctcccgg tctccgccca
      301 gcggcgcaac cagccgcagg aatcgaaacc ggtctttgac cccgcctggt acagccagct
      361 caagctcagg cacatcgggc cggaagggaa ccgggtctcg gcggtggcgg gcgtgccggg
      421 cgatccgctg gtgtactacg ccggcgcggc ctcgggcggg atcttcaaaa gcagcgatgg
      481 cggcgtccgg tgggagccga tcttcgacag ccagccggtg tcgtcggtcg gcgcgatcgc
      541 ggtggcgcca tcggatcaca gcgtggtgtg ggtaggaacc ggcgagccct tcatccggag
      601 caacatctcg ctcggttggg gcgtgttccg ttccaccgac gcggggaaga cctggagccg
      661 agccggactg gagctgaccg gacggatcgg acgcatcgcg gtcgatcccc gcaatcctga
      721 tgtcgtcctg gtggcggccc tgggtcatgg gtacggtccc cagccggaac ggggtgtcta
      781 ccggacggcc gacggcggca agacctggga tcgcaccctg ttcgtcaacg acagcaccgg
      841 tgccatcgac gtcatgatga acccggtcaa cccgcgcatc gcgtatgccg ccacctggca
      901 gctcaacatt cacaccgcgg gacgcaccag cggaggagcc ggcagcgggc tctggaagtc
      961 gaccgacggt gggatcacct ggagccggct caccggcagc ggacttccag cgaagccatt
     1021 cggcaaggtc gggctgggaa tttcgcgcag caatcccaat cgggtgtacg ccctgatcga
     1081 gaccagcgac ggcgtcccgt tccccgggtt cgagcccgag cgaggcgaac tgtggcggtc
     1141 ggatgatgcc ggggcgactt ggcaggtggt gagctacgac cggcagctgg ccggccggac
     1201 ccagtactac actcggatgg cggtggcgcc cgacaacgag aacgaggcct atttcgcggc
     1261 ggccgattgg agcaggacct acgacggcgg gaagaccacc atcgacgcca ccgggatcga
     1321 aacgccggga tacgatcacc acgacatctg gatcgatccc gccaacggca accgcatggc
     1381 agtgggccac gacggcggca tctccatctc ctggaaccgg ggcagaagct ggcaccaggt
     1441 ccagcttccg atcgcccaga tgtatcacgt gacggtcgac aaccagatcc cgtactacgt
     1501 ctacggcaac cgccaggatg gcaattccgc ccgcggcccc agcaacagca agttctccgt
     1561 cttcggatcg gaaagtggaa tcccccgggg cgaatggcgc tcggtggggg gcggcgaaag
     1621 cggttgggcc accccggacc ccgaagatcc caacctggtg tggtccagtg cttcggggtt
     1681 cggcagcctg ggcggcatcg tggcccggca cgatctccgg accggcatga cgcacaacgt
     1741 cgaagtctgg cccatgatga cccgggggtg gccggcggcc gaccttaagt accggttcta
     1801 ctggaccttc ccgctcacca tctcccccca cgaccggaac cgggtctacg tcggcagcca
     1861 gcacgtccac ctcacgatcg atgggggacg aagctggcgc gagctgagtc ccgacctcac
     1921 tcgcaacgaa aagaccaggc aggtcagctc cggcgggctc acccccgaca acatcggcgt
     1981 ggagtacgcc ggcgtggtga tggccatcgc ggaatcgcgg ctcaaggccg gcgtgatctg
     2041 ggccggaacc aacgatggac tggtccacct gagccaggac ggcggcagca gctggaccaa
     2101 cctcaccgcg aatatcaccg gcctgcttcc ctggggcacc atcagcaaca tcgagccctc
     2161 ccgcttcgag gccggggccg cgtacctgac ggtcgatgga caccaggtga acaaccgtga
     2221 tccatgggcc tatcgcacct cggatttcgg taagacctgg aaactcatcg tgaatgggat
     2281 ccccaagacc ccgctcagct acgcccactt cgtgaaggag gatccggtcc ggcgcggcct
     2341 gctctacctc ggcaccgaga atgcgctcta cctgtcgttt gacgacggcg acaactggca
     2401 gccgctccag aacaacctgc cgcacgcgcc ggtgcacggc atcgcgttgc aggagcactt
     2461 ctccgatctg gtgctcgcga cctacggtcg aggcttctgg atcctggatg acgtcacgcc
     2521 gctgcgacag ctgcatccga ccctgacgtc tcaggacgcg gcgctgttcg ccccccggcc
     2581 ggcctatcgc ctccgccagg tggagccggc ctggagccct ctctacgatc cggcggcggg
     2641 agccaaccca ccctatggcg catcgctgca gtactggctc aaggccgaag agaaggacac
     2701 cgtgcgactc gagatcgtcg accggagcgg gaccgtggtt cgcaagctca ccggcaccgg
     2761 acaagcgggc atcaaccggg tctggtggga cctgcgtttc gacccgccca aggcggcgaa
     2821 gctgcgcacc ccgccgctcc atgcgccgga gatcaccgtg accgcggagg gacgggcgtc
     2881 gttcgatcag ttcccgctga ccctgctggc gccgccgggg aactactcga tccggctcaa
     2941 gacggggggg aaggagtaca gccaggcgct ggagctccgt aaagacccga actccggggg
     3001 aagcgacgcg gagattaccc agcagatgga actcctgcgc cagatcagcg gggatctcca
     3061 ggccgcggtg gagatgatca atgcgctgga gaacatccgc caccagctgg cggccctgcg
     3121 catcactcta agcgacgaca ccgcccgcgc cgcggtgcgc aacgacgccg attcgctcaa
     3181 ccagaaagcc attgcggtcg agcaggagct ggtcgagctc cgcctgaccg ggcggggcca
     3241 ggatctgatc cgctacccgg tgcgcatcgc gggacggctg gcctatctgg gtggtgacct
     3301 cggcggctcg gactacgcgc ccaccgccca gcaccgggca gtgcacagcg agctgcgaag
     3361 ccagctcgag gcggtccggc gccgattcga tgaattcctg gcccgggacg ttgcggcgtt
     3421 caacgcggtg ctggctcagc gcgggatgaa cggtatcttt cgatagtcga aggagtcgaa
     3481 ggagtcgaag gagctcaatc tcgaccgcct tcgacgtctt cgacttcttc gaccccttcg
     3541 actccttcga ctccttcgac tccttcgacc atgtatagca accgcagaga tgcaggtcgc
     3601 cagctgggca gccgtctcgc ggcgttgcgc gctgcggacc ccgtggtcat cggactgccg
     3661 cgcgggggca tcctggtggc cgacgaggtc gcccgcgcgc tgggtg
//
LOCUS       DASWKS010000481         7260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2854065, whole genome shotgun sequence.
ACCESSION   DASWKS010000481 DASWKS010000000
VERSION     DASWKS010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2854065"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1493)
                     /locus_tag="VGA78_13655"
     CDS             complement(84..1493)
                     /locus_tag="VGA78_13655"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX9894970.1"
                     /translation="MTDPTAPPVGGIQALVDRAMDRVAGARAIPGNRVTLLFDGPEVY
                     PAMLERIGAARDWIHLDNYIIRDDATGRRFGEALCDRARDGLRVRVLADWFGSFATRR
                     RFWRRLRSAGIEVRLFGPPNLLRPFRNLTRDHRKLLVVDGRTSVTGGFCIGNEWSGDP
                     SQGRPPWRDTGVAIDGPAASALDQAFEAVWNQIGSPLPAGELAPDVPSQGEAAVRVVA
                     GEPAGIRASRMTELLLAGSAERVWLTDAYLVAPRGIYRALLDAAREGVDVRLLVPGTS
                     DLPHIRNLTRTGYRELLTAGVRIFEWRGPMLHAKSIVADGRWVRIGSTNMNVSSLVAN
                     YELDVMIDDQEFANQMEAQFRRDLDQSVEVWLKPARRFGDTLDFRLEASPGPRVRGLR
                     ERRRRTVIALRAVVGGSQRALLLQQTLGLMLLAGLLLFFPVPMAIVFGVLTLYFAFTG
                     MLETLERRRTARRTDGLTD"
     gene            complement(1512..2096)
                     /locus_tag="VGA78_13660"
     CDS             complement(1512..2096)
                     /locus_tag="VGA78_13660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX9894971.1"
                     /translation="MHRDSALALVHEYTSNEALRRHMYAVEIAMRAMAERAGEDPDRW
                     GLVGLVHDFDYERFPNPAHSATDEHPAHGVRLLAERGLPQDMQEAILGHARYTGVART
                     TPMARALFAVDELCGFLVACALVRPSKSLADLEVSSVKKKLKDKAFARGVSREDVFQG
                     AEELGLPLEELIQFVLVALRPLEKEFGLGPTDAA"
     gene            complement(2265..2678)
                     /locus_tag="VGA78_13665"
     CDS             complement(2265..2678)
                     /locus_tag="VGA78_13665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894972.1"
                     /translation="MIVDFAVLADYALVDQHGKLSVLGIFQHVWVQSFPAVHPRTHLV
                     LRVRGRRNEIGSHPVRIRFVDQQGTELVGGEGTIQFGEPPAGVTEIEAGAVLVFDVPL
                     PQSGHYAFEIQLDGQAAIRVPLSASALPASGSTLH"
     gene            complement(2692..3141)
                     /locus_tag="VGA78_13670"
     CDS             complement(2692..3141)
                     /locus_tag="VGA78_13670"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX9894973.1"
                     /translation="MMKTATLVTEKGTIVADLFDEEAPTTVANFEKLANQGFYDGTRF
                     HRVIPDFVIQGGDPLSRDPNNPRAGTGGPGYKIKCETSRNVHKHVAGTFSMAHAGKDT
                     GGSQFFIAHSPQPHLDGVHTVFGQVKEGMDVVMAIRKNDKVESIRVT"
     gene            complement(3231..5336)
                     /locus_tag="VGA78_13675"
     CDS             complement(3231..5336)
                     /locus_tag="VGA78_13675"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX9894974.1"
                     /translation="MNQLAQANSAYLRSAAHQPVDWRQWSEAAFAEARQSERPVLLDI
                     GAVWCHWCHVMDGESYEDAGLAAFMNQNFLCVKVDRDERPDVDARYQRAVQAITGQGG
                     WPLTAFLTPDGEVFYGGTYFPPDDRWGRPGFRTVLEQVLHFWRDQRSRALDQASALRR
                     MLADQTDRVTPGRVTASMLLSAERQILAAFDPAFGGFGSAPKFPHPGVVRFLLSRWAD
                     GGSSQTAHVARETLLAMARGGMRDHLGGGFHRYSVDREWIIPHFEKMSYDNSELLAAY
                     LDAGVLLDSPEFGETARSSVAWVREVLANPGGGYGTSQDADVGPDDDGSYFTWTLDEM
                     AAVLKRDELEVASRRFGLGTGGAMPHHPERNVLYAAQTVDDVAQRSGRTATAVAELLA
                     SAVEKLQAARSRRPAPVVDHNQYTSWNAMMASAMLHAAAVLDDPWARDHALRTLARLG
                     GWDGELPVRPSVRPPVPLPHAPGVEGLLEDQVYAADAALHAFEATADGAWLDWAAALM
                     EEVWNGWRDHSGGGLFDLVPGRGGPGLLTQGLKSIEDAPVPAPNGVAGIVFARLAAHL
                     DDPRWSSRHRAQVEAFAAVAPGMGLHAAAWLQAADWQLHPPHHLVITGPVGHPTADAM
                     HQLALRTVLPRRVVRRLHPDDDAPGGLPAELRVMVEAGPRVRGYLCRGTQCEAPADHL
                     EAWQERLRSAGRRMEASLA"
     gene            complement(5413..6177)
                     /gene="nth"
                     /locus_tag="VGA78_13680"
     CDS             complement(5413..6177)
                     /gene="nth"
                     /locus_tag="VGA78_13680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX9894975.1"
                     /translation="MRRTDGRAGRRTGGTKAAVRSEARTARLPARPPAQAQAVVKLLR
                     REYPDAHCELNFRTPYELLVATILSAQCTDVRVNLVTPGLFERFPTAQVLAGANPDEL
                     EDMIRSTGFFRNKTKSLLGMAHALVETHGGEVPSSMEELRRLPGVGRKTANVVLGNAF
                     GINQGITVDTHVARLSDLLQLSREADPLKIEQDLMAQVPRKDWTMFSHLLIWHGRRVC
                     IARRPKCPECVLNRICPSARLDPAPARPAKRRIASS"
     gene            complement(6174..>7260)
                     /locus_tag="VGA78_13685"
     CDS             complement(6174..>7260)
                     /locus_tag="VGA78_13685"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEX9894976.1"
                     /translation="TQIAQIPGVDEYAGQDERRATLRFAGGSLVQVVVTTPVNLGAVL
                     VQATGSEAHLARLVERASGRGYTLQGAALWHRSEFVPTPTEQALYAALGLAEIPPELR
                     EGLNELELAAGGLPRLVDAGDIRGFIHCHTNFSDGSSTVEELALAGRDAGFEYLGITD
                     HSSSAAYAGGMGREDLERQWAEVDAVNRRVGGIRVLKGIEVDILENGELDYGEEVLSR
                     FDFVIASVHTRFAMDQRAMTERLLRAMESPWITIMGHPTGRLLLARESFPVNLGAVYA
                     KAAEQGIAMEINADPHRLDLDWRLLGDARTAGVTISIGADAHNVAGLENMTWGLGLAR
                     KGGLGPEDILNTRPVDEFLAFAARRHA"
BASE COUNT         1198 a         2510 c         2417 g         1135 t
ORIGIN      
        1 ggcggacggg cggacgggcg gacggggcac tcgctaaagg gatgggtatc gccatgcggc
       61 gcaagacctt tcagtaccgt ccgtcagtcc gtcagtccgt cggtacgtcg ggccgtcctg
      121 cgccgctcca gggtctcgag catgccggta aacgcgaagt acagcgtgag gacgccgaag
      181 acgatggcca tgggcaccgg gaaaaagagc agcagccccg ccagcagcat gagacccagg
      241 gtctgctgca gcaagagcgc gcgttgggat ccgcccacga cggcccggag ggcaataacg
      301 gtgcggcgac ggcgctcccg caggccgcgc acccggggac cgggggaggc ctcgaggcgg
      361 aagtccagcg tatccccgaa tcgccgagcc ggcttgagcc atacctcgac gctctggtcc
      421 aggtcgcggc ggaactgcgc ttccatctgg ttcgcgaact cctgatcgtc gatcatcacg
      481 tcgagctcgt agttggccac cagactggac acgttcatgt tggtcgaccc aatacggacc
      541 cagcggccgt cggccacgat gctcttggca tgcaacatgg ggccccgcca ctcgaagatg
      601 cgaacgccgg cggtcagcag ttcgcgatac ccggtacgag tgagattccg gatgtggggc
      661 agatcgctgg tcccggggac cagcagccgg acatcgaccc cctccctggc ggcatcgagc
      721 agcgcccgat agatgccccg gggcgccacc agatacgcat cggtcagcca gacccgttcg
      781 gccgatcccg ccagcaacag ctcggtcatc cgggaggcgc ggattccggc cggttcgccg
      841 gcgaccaccc ggacagcggc ttcaccctgg ctgggcacgt cgggcgcgag ctcaccggcg
      901 gggagcgggc tgccgatctg gttccagacc gcttcaaagg cctgatccag cgccgaggcg
      961 gccggtccat cgatggcgac gccggtgtcg cgccagggcg ggcgcccctg cgacggatca
     1021 ccgctccatt cgttgccgat gcagaacccg ccggtcacgg aggttctgcc gtccaccacc
     1081 aacagcttgc gatggtcccg cgtcaggttc cggaagggcc gcagcaggtt gggcggcccg
     1141 aagagccgca cctcgatccc ggccgaccgg agtcgccgcc agaaacggcg gcgggtggcg
     1201 aaggaaccga accagtccgc cagcacccgc acccggaggc cgtctcgggc gcgatcgcac
     1261 agcgcttcgc cgaagcggcg gccggtggcg tcatcgcgga tgatgtagtt gtccaggtga
     1321 atccagtccc gcgccgcgcc gatccgctcc agcatggcgg ggtacacctc gggaccatcg
     1381 aacagcagag tgacccgatt gcccgggatg gcccgtgctc cggccacccg gtccatggcg
     1441 cggtcgacca aagcctgaat gcctccgacc ggcggagcgg tgggatcggt catccggccc
     1501 gggggcgggg ttcaggcggc atcagttggc cccagcccga actctttctc aagcggccgc
     1561 aacgcgacca gcacgaactg aatcaactcc tcgagcggca ggcccagttc ctccgcaccc
     1621 tgaaacacat cctcccggct cactccgcgg gcgaaagcct tgtccttgag cttctttttg
     1681 acgctcgaaa cctccaggtc ggccagactt ttcgagggcc gcaccaaggc gcacgccacc
     1741 agaaacccgc acagctcgtc caccgcgaag agcgcccggg ccatcggcgt ggtccgcgca
     1801 accccggtgt agcgggcatg acccaggatg gcctcctgca tgtcctgcgg caggccccgt
     1861 tcggccagga gccggacccc gtgggccggg tgttcgtcgg ttgccgaatg ggccgggttg
     1921 ggaaaacgct cgtagtcgaa atcgtgtacc agccccacca gtccccagcg atcgggatcc
     1981 tccccggccc tctccgccat ggcgcgcatg gcgatctcga cggcgtacat gtggcggcgg
     2041 agcgcctcgt tgctggtgta ctcgtggacc agcgccagag cggaatcacg gtgcatggta
     2101 ggagcataac aggaggtggg aaggggaagt gaactggaga atgcccagtg ccgaatgccc
     2161 aatgcagagg gggtcgccgg cagcccacct ctgccatggg cactgggcat tgggcattct
     2221 ccagttcact ccgccctccc ggttcatccc tctcacctgg cgctttagtg aagagtcgat
     2281 ccggaagcgg gtaaggcaga ggcagagagc ggaactcgaa tggcggcttg gccgtcgagc
     2341 tggatctcga aggcgtagtg tcccgactgg ggcagcggca catcgaatac cagcaccgcg
     2401 ccggcctcga tctcggtgac gcccgccggc ggctcgccga actggatggt gccttccccg
     2461 ccgaccagct cggtgccctg ctggtccacg aaccggatcc gcaccgggtg cgatccgatc
     2521 tcgttgcgcc ggcctcgcac ccggaggacc aggtgggtgc ggggatggac cgcgggaaag
     2581 ctctgcaccc agacgtgctg gaagatcccc agcacggaca acttgccgtg ctggtcgacc
     2641 agggcatagt cggcgaggac cgcgaaatca acgatcatcg cctttgacct gtcatgtcac
     2701 tctgatcgat tcaactttgt cgttcttccg gatcgccatg accacatcca tgccttcctt
     2761 cacctggccg aacacggtat gcaccccgtc gagatggggc tggggcgaat gagcgatgaa
     2821 gaactggctc ccgccggtgt ccttgccggc gtgggccatt gagaaggtcc cggcgacatg
     2881 cttgtggacg ttccggctgg tttcgcactt gatcttgtac cccggcccgc cggtgcccgc
     2941 cctcggattg ttcgggtcac gcgagagcgg atctcctccc tgaatgacga aatcggggat
     3001 cacccggtgg aatcgggtac cgtcgtagaa tccctggttg gcgagcttct cgaaattggc
     3061 gacggtagtg ggggcttcct cgtcgaacag atcggcgacg atggtcccct tttcggtgac
     3121 gagtgtggcg gtcttcatca tggtcgaagg ggtcgaaggg ggtcgaaggt ggtcgaagca
     3181 gtcgaagccg gttgacttgc cccaaagtta aacgcctggg gcaccaatcc ctacgccaga
     3241 ctggcctcca tccgccgtcc cgccgaacgc agccgctcct gccacgcttc gaggtggtcc
     3301 gccggtgctt cgcactgggt gccgcggcag agataccctc gcacccgtgg ccccgcctcc
     3361 accatgaccc ggagctcggc cggcagcccg cctggcgcat cgtcgtcggg gtggaggcgg
     3421 cgcaccacgc gacgaggcag cacggtgcgg agcgccagct ggtgcatcgc gtcggccgtg
     3481 ggatgaccca ccggcccggt gatgacgagg tgatgcggcg gatgcagctg ccagtcggcg
     3541 gcctgcagcc acgccgccgc gtgtaatccc atgcccggcg cgaccgcggc gaaggcctcg
     3601 acctgggccc ggtgccggct ggaccaccgg ggatcatcga ggtgggctgc cagtcgggcg
     3661 aacacgatcc cggcgacgcc gttcggcgcc ggcaccgggg cgtcttcgat ggacttgaga
     3721 ccctgggtca ggagccccgg accgcctcgc cccggcacca ggtcgaagag cccgccgccg
     3781 gagtggtccc gccaaccgtt ccacacctcc tccatcaggg ccgcggccca gtcgagccag
     3841 gccccgtcag cggtggcctc gaaggcgtgc aacgcggcat cggcggcgta cacctggtct
     3901 tccagcaggc cttccacccc gggggcatgc ggcagcggga ccggcggacg gaccgacggg
     3961 cggacgggca gttccccgtc ccatcccccc agacgcgcga gggtccgaag cgcgtgatcg
     4021 cgggcccagg ggtcatccag caccgccgcc gcgtgcagca tcgcgctcgc catcatcgcg
     4081 ttccaggagg tgtactgatt gtgatcgacc accggcgcgg gccggcggct ccgggcggcc
     4141 tggagtttct cgaccgcact cgcgagcagc tcggccacgg cggtcgcggt gcgcccgctc
     4201 cgctgggcga cgtcgtccac cgtctgcgcg gcgtacagca cgttgcgctc ggggtggtgg
     4261 ggcatggcgc caccggtgcc cagtccgaat cgacgggatg cgacctcgag ctcgtcccgc
     4321 ttgaggaccg ccgccatttc gtcgagggtc caggtgaaat agctgccgtc gtcatcgggc
     4381 ccaacgtcgg catcctggct ggtcccatag ccgccgcccg gattggccag gacctcacgc
     4441 acccatgcca cgctgctccg ggcagtctcc ccgaactccg gcgagtcgag cagtacgccc
     4501 gcgtcgagat aggccgccag gagctccgag ttgtcgtaac tcatcttctc gaagtggggg
     4561 atgatccact cccgatccac gctgtagcgg tgaaagccgc cgcccaggtg gtcgcgcata
     4621 ccgccccggg ccatcgccag cagggtttcc cgcgcgacgt gggccgtctg actggaaccg
     4681 ccgtcggccc agcgcgacag gaggaaacgc accaccccgg gatgggggaa cttgggcgcg
     4741 gaaccgaagc cgccgaaagc cgggtcgaag gcagccagga tctgccgctc ggccgacagc
     4801 agcatgctgg ccgtcacccg gcccggagtc acccggtcgg tctggtcggc cagcatcctc
     4861 ctgagcgcgc tggcctggtc cagcgcccga ctccgctggt cccgccagaa gtggagcacc
     4921 tgctccagca ccgtgcggaa cccgggccga ccccagcgat cgtccggcgg gaagtaggtc
     4981 ccgccgtaga acacttcgcc atcgggtgtg aggaacgcgg tcagaggcca gccaccctgc
     5041 ccggtaatgg cctggaccgc gcgctgatag cgcgcgtcca cgtcgggccg ttcatcgcgg
     5101 tcgaccttga cgcacaggaa attctggttc atgaaggcgg cgagcccggc atcctcgtat
     5161 gactcaccat ccatcacgtg gcaccaatgg caccacaccg cgccgatgtc gagcagcacc
     5221 ggccgctcgg attgtctggc ctcggcgaac gcggcctcgg accactgtcg ccaatccacc
     5281 ggctggtggg cggcggagcg gagatatgct gaattggcct gcgccagctg attcatcacc
     5341 catctcccta acgcctgcaa gataggacga atgaggcagc ctggttttac cgccggctag
     5401 cataccggta catcaggagc tggcgatgcg tcgcttggca ggccgggccg gcgcgggatc
     5461 taggcgggcc gaaggacaga ttcggttgag cacacactcg gggcatttgg gtcggcgcgc
     5521 gatgcacacc cgccggccgt gccagatcag cagatgggag aacatcgtcc agtccttgcg
     5581 agggacttgc gccatcagat cctgctcgat cttgagcgga tcggcctctc ggctgagctg
     5641 cagcagatcc gagagccggg cgacgtgggt atcgacggtg atcccctggt tgatcccgaa
     5701 ggcgttcccc agcaccacgt tggcggtctt cctccccacc cccggcaacc ggcgcagctc
     5761 ctccatgctc gagggcacct cgcccccgtg cgtttccacc agggcgtggg ccatgcccag
     5821 caggctcttc gtcttgttgc ggaagaaacc ggtcgaccgg atcatgtcct ccagctcatc
     5881 cggattggca cctgccagga cttgcgccgt gggaaagcgc tcgaagagtc ccggcgtcac
     5941 caggttgacc cggacgtcgg tacactgggc cgagaggatt gtggccacca gcagctcgta
     6001 gggcgtacgg aagttgagct cacaatgggc gtcgggatat tcgcgacgca ggagctttac
     6061 cacggcttgc gcctgggcgg gcgggcgggc aggcaggcgg gcggtccgcg cctccgaccg
     6121 aaccgcggcc ttcgtacctc ccgtccgcct gcccgcccgc ccgtccgtcc gtctcatgcg
     6181 tgtctccgcg cggcaaacgc gagaaactca tcgaccggcc gggtattgag aatgtcctcc
     6241 ggcccgagac cacccttgcg cgccagcccc aggccccagg tcatgttctc gagcccggcg
     6301 acgttgtgtg catcggcgcc gatcgagatg gtgacgcccg ccgttctggc gtcgcccagc
     6361 aggcgccagt cgaggtcgag ccggtgcggg tccgcgttga tctccatggc aatgccctgc
     6421 tcggctgcct tggcatagac cgcgccgaga ttgaccggga aggattcccg ggccagcagc
     6481 aaccgcccag tcggatgacc catgatcgtt atccaggggc tctccatggc ccgcagcagc
     6541 cgttcggtca tggcgcgctg gtccatggca aagcgggtgt ggaccgatgc gatcacgaag
     6601 tcgaagcggc tcagtacctc ttcgccatag tcgagctcgc cgttctcgag gatgtccacc
     6661 tcgataccct tgagcacccg gatgccgccg actcgccggt tcaccgcgtc gacttcggcc
     6721 cattgccgct ccagatcctc ccgccccatc ccgccggcgt aggcggccga gctggagtga
     6781 tcggtgatcc cgagatactc gaagcccgcg tcccgaccgg ccagggccag ctcctcgacc
     6841 gtgctcgatc cgtcggagaa gttggtgtga caatggatga aaccgcggat gtcgcccgcg
     6901 tccaccagac ggggaagtcc gccggcggcc agctcgagct cgttcaaccc ctcgcgcaac
     6961 tcgggcggaa tctcggccag ccccagcgcg gcatagaggg cctgctcggt gggagtgggc
     7021 acaaactcgc tccggtgcca gagcgcggcg ccttgcaggg tgtagccccg gcccgaggcc
     7081 cgctccacca gtcgcgccag gtgcgcctcg ctgccggtgg cctgcaccag gaccgcaccc
     7141 agattgacgg gcgtagtcac gaccacctgt accagggatc cgcccgcgaa ccgcagggtg
     7201 gctcgacgct catcctggcc ggcgtattca tctacgcccg ggatctgggc gatctgggtc
//
LOCUS       DASWKS010000482        10339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1755601, whole genome shotgun sequence.
ACCESSION   DASWKS010000482 DASWKS010000000
VERSION     DASWKS010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1755601"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2295)
                     /locus_tag="VGA78_13690"
     CDS             complement(<1..2295)
                     /locus_tag="VGA78_13690"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9894977.1"
                     /translation="MLAWSLRFRSLAAVLFLLPFPLTLRAQGVTTAALHGVVSDDRGA
                     PISDANLLVVHLPSGTQYRGLTRSGGAYGIPNMRVGGPYRVSVRAIGFEPRDQEDVFL
                     NLGQNLRLDYQLTRQAVQLAELAVTSERDQVLNAGRTGAATFLTRDQVTLLPSIKRST
                     RDLTRLDPRSDGNLSFAGRNWLYNNISLDGSYFNNPFGLDDPSPGGQTNAEPVPYDAV
                     DQVQVSVAPFDVRQGGFTGANVNTVTKSGTNDFRASLYSFYRSDEMLGNTIRGSPVVA
                     NPDLNFIQSGVSVSGAFKRDKLFFYVNAELERTDDPGTNFVAARSGVSGFGVSRVQAA
                     VMDAIRQRLIDEYDYDPGPYEGYVHETNNNKLLAKLDWNINPNNNLTFRYNFLDAKRD
                     LPPHPFVLSINNSGRGPNESTLPFYNSGYAINNNLNSFALELNSRGSGFANRFFASFN
                     RFRDFRQPFSRDFPTLEIGEDGVTYTTAGHEPFSIHNILDQDVLQLTNNFTLPRGRHN
                     LTFGGNFESFSFFNSFNIFRHGLFQLPYQLDFLRATTFPSVAEFMAATDPNNPDQLDL
                     NGYVGGGPFKGEKIAVGQLSFYGQDEFLVSNRFTLTYGLRADFPLYFTDPVDNPFSRA
                     QIALDENDQAETVDQSELPGAKLMLSPRVGFNWNAVGERSTQLRGGTGIFTGRVPFVW
                     VGNVISNPGANPNLFPAAGAPEIPTSDDAILQQSFDLNAMDPDFKWPQIWTTDLAVDQ
                     QLPWDLLGTFEVIYSKDLNAVFMRN"
     gene            complement(2486..3013)
                     /locus_tag="VGA78_13695"
     CDS             complement(2486..3013)
                     /locus_tag="VGA78_13695"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9894978.1"
                     /translation="MKRVMSVLALAVVMQATVETASAQAGAVSGLGAVYGAGKGFLLR
                     AAEQMPEADYSFKATPAVRSFGEIVGHVADANYMFCSTATGAANPKQGSSAEKLATKA
                     ELVQALKDAFAYCDQAYQIPDAKGVEPVDLFGMKTNRLGALAFNAGHNYEHYGNIVTY
                     MRLKGMTPPSSQRGM"
     gene            complement(3010..7488)
                     /locus_tag="VGA78_13700"
     CDS             complement(3010..7488)
                     /locus_tag="VGA78_13700"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9894979.1"
                     /translation="MPLSAFHPLVGQWFTERLGQPTPAQRRGWEAIRSGAHTLIAAPT
                     GSGKTLAAFLIALDSLLQQSLAGTLTDEVQVIYVSPLKALSADIHKNLAEPRREIRRM
                     AEALGHGTPHLTAAVRTGDTTSAERTAMLRTPPHILVTTPESLYLLLTAERSRNMLRT
                     ARTVIVDEIHAVVETRRGAHLALTLERLDHVVGRPLQRIGLSATQKPVEDVAAWLTGG
                     RTDGPTDGKGPGSQSVSPSGRLPVIVDEGHRRDLDLALELPGSPLQAVMSAEVWEEIY
                     NRLAQLVAEHRTTLVFVNTRRLAERAARHLSERLGEEAVTSHHGSLSKEARLDAEDRL
                     KTGRLKALVATSSLELGIDIGHVDLVCQLGSPRRISTFLQRVGRSGHTVHATPKGRLF
                     PLTRDELIECAALLRSVRSGELDRIVVNEESLDVLAQQIVAETAAEQWGTDQLYQMVR
                     RARPYRDLPRADFDAVVAMLADGYVTRRGRRAALIHHDIVNRRIRGRRGARLMALMSG
                     GAIPDNADYRVILEPEGTFIGTVNEDFAIESMAGDIFQLGNTSWRMLRIERGTVRVED
                     ARGQPPGIPFWLGEAPARSPELSLSVSSLRRDLGEQLGDRDGATRWLEQNTGISPVAA
                     SQMVEYLSQARNALGVLPTQETLVAERFFDEAGGMQLVIHSPFGSRVNRAWGLALRKR
                     FCRQFNFELQAAATEEAVLLSLGPQHSFPLETVFRFLNPESAEDILVQALLDAPVFAT
                     RWRWNANISLAVPRFQGGRKVPPQIQRMEADDLLAAAFPDAAACLENIPGDREIPDHP
                     LVQQVLSDCLHEAMDLDRFLGLLRRIQQGEVACLARDLPEPSPLAHEILNAKPYAFLD
                     DAPLEERRTQAVQTRRAFEPTSGENLGALDQEAIGRVRDEAWPDPENPDELYDTLQVS
                     GFLTETEGKAGRDAGSWEPLMQQLEADGRAYRIGRLWVAHERIGQALAVYPDFVGRVG
                     RVGKVGPTAPTPTREEAIRELLRGRMEILGPTTAPALAESLGIADAEAEAALLALEGE
                     GVVLRGSFTARDSVLSTQSSALGEWCERRLLARIHRYTLNRLRAEIQPVSTSDFARFL
                     IKWQRLEPSERAAGLEGLASVVEQLEGFEAPARSWEADLLGARCAEYDPQLLDLLCMT
                     GRVAWSRLSLPVRADNGGSASRPIRSTPMALVMREHADLWLSLSPERALEGQSTYAQG
                     VLEVLRSRGASFFAELVAGSGLLPTQVEQALGELAAAGLITSDSFAGLRALLTPSARR
                     KPIAGGVRRHRTVGFGIESAGRWALVARETQATGREAAPSQSLEAFARVLLRRYGVVF
                     NRILSRESISVPWRELLLIYRRLEARGEIRGGRFVAGVTGEQFALPEAVVTLRAVRRS
                     ARTGQLVSISAADPLNLLGSVLPGERIPALAGNRIVFEDGSPMAVLEAGKVRLLAAYG
                     PERALAIERMLTRRPVSVALRAILAISGSPPPAPADRPRRRAARRFPIPTREESSP"
     gene            complement(7495..8367)
                     /locus_tag="VGA78_13705"
     CDS             complement(7495..8367)
                     /locus_tag="VGA78_13705"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEX9894980.1"
                     /translation="MFKAAAVFAVGLTLSSLPIASAQIRASERGSVSQTVDGTVITVD
                     YARPQLRGRDSVFGKVVRATHTWTPGANWATTIEVNRPVQLNGREVPAGKYSVWIMAA
                     PGEWTINLHQNPRLFHTQHPKAEEMFLALKVAPQWSEEPVEVLTFDFPRVARDGATLR
                     MRWSTAVLPLEIAVQSSRAAVASRGLELAPYLGSYTVTTEVEGKTIEMKAELIDSNGS
                     LRAVMDGAWGSFTMEFIPTDKPHQFVPAFMEGGKVVDVEETPVIFELEAGRATGFIVM
                     GIGQDVWMRGKRKS"
     gene            complement(8449..8877)
                     /locus_tag="VGA78_13710"
     CDS             complement(8449..8877)
                     /locus_tag="VGA78_13710"
                     /inference="COORDINATES: protein motif:HMM:NF025170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PCYCGC motif-containing (lipo)protein"
                     /protein_id="HEX9894981.1"
                     /translation="MAGSLWGRRQFLVMIPGALLALGGVHSPAGGVVAPRLAPHPDPR
                     PGIDASRVLRAAQLEHARAAPVFDLVRQIPQVVDGIRCYCGCAETPGNYSLLSCYEAG
                     GMAQQCNICQGQARLAHRLNREGWSLNGIRAAIDAEFGAS"
     gene            9008..10204
                     /locus_tag="VGA78_13715"
     CDS             9008..10204
                     /locus_tag="VGA78_13715"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9894982.1"
                     /translation="MPRFTIGTLLGLALPLGTGFAQRAERVAGAVPVSGVVFLDRNQN
                     GIRDGSEPGLPGVAVSDQVGITTTDDSGRFRLDAAGYGLLFVTQPDGYLVRGSSWRRA
                     EAGRELAFSMVPAAAGSSFAFLHASDTHIREANLARMQRLRTITDSVGPAFVLISGDL
                     VRDALRVSETEAKGYYDLFVAELGRFRVPVHTVPGNHEIFGIERHHSLVSQSHPLYGK
                     RMYRSYLGPNYHSFTYGGVHFVGLDTVDYDDLWYNGHVDSLQLGWLAADLAALKPGTP
                     VVTFNHIPLVTAGEVIDGFRDDGPAATTIRIGGRWFFRHSVRNAAAILDVIGPRLELA
                     LGGHMHRREMLRFETAFGSRRFHQTAAVTDPDRGEGPMGIRSGVTLYRVTNGRVDDGT
                     FIPLNP"
BASE COUNT         1738 a         3462 c         3352 g         1787 t
ORIGIN      
        1 gttccgcatg aacaccgcgt tgaggtcctt ggagtagatc acctcgaagg tgccgaggag
       61 gtcccagggg agctgctggt caacggccag gtcggtggtc cagatctgag gccacttgaa
      121 gtccggatcc atggcgttca aatcgaacga ctgctgcagg atcgcgtcgt ccgaggtcgg
      181 gatttcagga gcgcctgcgg ccgggaagag gttcgggttg gcgcccgggt tcgagatgac
      241 gttcccgacc cacacgaacg gcacccgccc ggtgaagatg ccggtcccgc ctcggagctg
      301 ggtgctgcgt tcgcctaccg cgttccagtt gaagccgacc cggggcgaga gcatcagctt
      361 ggcaccgggc agctcgctct gatcgaccgt ctcggcctgg tcgttctcgt ccagcgcgat
      421 ctgggcccgg ctgaacggat tgtccaccgg gtcggtgaag tacagtggga agtcggctcg
      481 caaaccgtag gtcagggtga accggttgga gaccaggaac tcatcctgcc cgtagaacga
      541 gagctgcccc accgcgatct tctcgccctt gaagggcccg cctcccacgt agccgttcag
      601 gtcgagctgg tccggattat tggggtccgt ggcggccatg aactcggcca ccgaggggaa
      661 ggtggtcgcc cgcaggaagt ccagctggta cggcagctgg aacaagccat ggcggaaaat
      721 gttgaacgag ttgaagaagg agaatgactc gaagttgccg ccgaaagtca ggttatgacg
      781 tccccggggg agcgtgaagt tgttggtgag ctggagcacg tcctgatcca ggatgttgtg
      841 gatcgagaat ggctcgtgcc ccgccgtcgt gtaggtgacg ccgtcctcac cgatctccag
      901 cgtcggaaag tcacgactga aaggctggcg gaagtccctg aaccggttga agctggcgaa
      961 gaaccggttg gcaaacccgc tcccccggct gttcagctcc agcgcgaacg agttcaggtt
     1021 gttgttgatg gcatagcccg aattgtagaa cggcagcgtg ctttcgttgg gcccccggcc
     1081 ggaattgttg atgctcagca cgaacggatg gggcggcagg tcgcgcttgg catccaggaa
     1141 attgtagcgg aacgtcaggt tgttgttcgg gttgatgttc cagtccagct tcgccagcag
     1201 cttattgttg ttggtctcgt ggacatagcc ctcgtacggc cccggatcgt agtcgtattc
     1261 gtcgatcagg cgttgccgga tcgcatccat caccgcggcc tgcacccgtg acaccccgaa
     1321 ccccgagacg ccgctccggg ccgccacgaa gttggtcccg ggatcgtcgg tccgctccag
     1381 ctcggcattc acgtagaaga agagcttgtc ccgcttgaac gccccgctga cgctgacacc
     1441 cgactggatg aagttgaggt cggggttggc caccaccggc gatcccctga tggtattgcc
     1501 cagcatttcg tcgctgcggt agaaggaata gagcgatgcc cggaagtcgt tggtcccgct
     1561 cttggtgacc gtgttgacgt tggcgccggt gaaaccgccc tgccggacgt cgaacggcgc
     1621 caccgagacc tgcacctggt ccaccgcgtc atacggaacc ggctcggcgt tggtctgtcc
     1681 ccccggcgac ggatcgtcca gcccgaacgg gttgttgaag tacgagccat ccagcgagat
     1741 gttgttgtag agccagttgc ggccggcgaa gctgagattg ccgtcgctgc gtggatccag
     1801 acgggtcaga tcgcgggtac tgcgcttgat cgacgggagc agcgtcacct gatcccgggt
     1861 taaaaaggtc gcggcgccgg tccgccccgc gttgagcacc tggtcgcgct cgctcgtgac
     1921 cgccagctcc gcgagctgca ccgcctggcg ggtgagctgg tagtcgagcc ggaggttctg
     1981 gcccaggttc aggaacacgt cctcctgatc ccggggttcg aacccgatgg ctcggacgct
     2041 gacccgatag ggtccgccca cccgcatgtt ggggatgccg taggccccgc ccgagcgggt
     2101 cagaccgcga tactgagtcc cgctgggcag gtggaccacc agcaggttgg catcggaaat
     2161 gggcgcaccc cgatcgtcac tcaccacccc gtgcaacgct gcggtcgtaa cgccttgggc
     2221 ccggagcgtc aacggaaacg ggagtaggaa cagcacggcg gccagactgc ggaagcgcag
     2281 actccaggct agcatgcgat ctcccttctg tggtgatccg ggcggagcat cttgaaacga
     2341 ttgtgggaga agcgtacccc ctcgaatccc ggcgtcaagt aggcagaagg cggtggaagc
     2401 cggggacccg cccccgcctt cgaccgcctt cgactgtctt cgaccccttc gacgtcttcg
     2461 accccttcga cgtcttcgac cggaattaca tcccgcgctg actggacggc ggggtcatcc
     2521 ccttgagccg catgtaagtc acgatgttgc catagtgctc gtagttgtgg cccgcgttga
     2581 aggccagggc acccagccga ttggtcttca tcccgaaaag gtcgaccggc tcgaccccct
     2641 tggcatcggg aatctggtag gcctggtcgc agtaggcgaa ggcgtccttc agggcctgca
     2701 ccagctcggc cttggtggcg agtttctcgg cgctgctgcc ttgtttggga ttggccgcgc
     2761 cagtggccgt ggagcagaac atgtagttgg cgtcggccac gtgcccgacg atctcgccaa
     2821 agcttctcac cgccggagtc gccttgaagc tgtagtccgc ttcaggcatc tgctcggccg
     2881 cgcgcagcag gaagcccttc cccgctccgt agactgctcc caatccggag accgctcccg
     2941 cctgggcgga tgctgtctcc actgttgcct gcatgacgac tgccaaggcc agaaccgaca
     3001 tgacgcgctt catggtgacg actcctcacg agtgggtata gggaacctgc gtgctgctcg
     3061 ccgtcgcggc cggtcggccg gagcaggcgg ggggcttcca gaaatggcca agatcgctcg
     3121 aagggccaca ctgaccggcc gccgggtcag cattcgttcg atggccaggg ctcgttccgg
     3181 cccataggcc gccaggagtc ggacctttcc cgcctccagc accgccatcg gacttccgtc
     3241 ctcgaacaca atacgattgc cggccagcgc cgggattcgc tcgccgggca gcacgctgcc
     3301 gagcaggttc aacggatcgg cggcactgat ggaaaccagc tggccggtcc gggccgaccg
     3361 gcgcacggcc cgcagggtga cgaccgcttc cggcagggcg aactgttctc cggtaacccc
     3421 ggcgacaaac cggccgcccc ggatctcacc ccgggcttcc agccggcgat aaatgaggag
     3481 cagttcccgc cacggaaccg aaatgctctc ccgcgaaagg atccggttga aaactacccc
     3541 gtagcgccgc agcaggaccc gagcaaaggc ctcgagcgac tgggacggag cagcctcgcg
     3601 accggtggct tgggtctcgc gggccaccag cgcccaccgg cccgcgctct cgattccgaa
     3661 tcccacggtc cggtgccgtc gcaccccccc ggcaatcggc ttgcgacggg ccgatggggt
     3721 gagcagagcc cgcagcccgg caaagctgtc cgacgtgatc agcccggccg cggccagttc
     3781 ccccagcgcc tgctccacct gtgtgggcag caaacccgag ccggcaacca actccgcgaa
     3841 gaatgaagcg ccccggctcc gcagcacttc cagcacaccc tgggcatagg tcgactgccc
     3901 ttccagcgcg cgttcggggg acaacgagag ccacaggtcg gcgtgctccc tcatcaccag
     3961 ggccatgggc gtgctgcgga tgggccggga agcggaaccg ccattgtcag ccctcaccgg
     4021 cagcgacaat cggctccaag ccacccgccc cgtcatgcac agcaggtcga gcagttgagg
     4081 atcatattcc gcgcagcggg cgcccaggag gtccgcctcc cagcttcggg ccggcgcctc
     4141 gaatccctcc agctgttcga cgaccgaggc gagcccttcc agccccgccg cccgttccga
     4201 cggctccagc cgctgccact tgatgaggaa ccgggcgaaa tcgctggtcg agaccggctg
     4261 gatctcagcc cgcagccggt tgagggtgta gcggtggatc cgggccagca accgtctctc
     4321 acaccactca ccaagggctg aggactgagt actgagtact gagtcgcgtg cagtgaagct
     4381 tcctctcaag acgacgccct cgccctcgag cgccagcaac gctgcttctg cttcggcatc
     4441 cgctatgccg agggactcgg cgagcgcggg cgctgtggtg ggacccagga tctccatgcg
     4501 cccgcgcaac agctcccgga tcgcttcctc tcgggtcgga gttggagcgg taggtccgac
     4561 ctttccgact ctgccgaccc ttccgacaaa gtcgggatag accgcgagcg cctgcccgat
     4621 cctctcgtgc gccacccaga gacggccgat ccggtaggcc cggccgtcgg cctcgagctg
     4681 ctgcatcagc ggctcccacg agccggcatc gcgtccggcc ttgccttccg tttcggtcag
     4741 gaagcctgaa acctgcagcg tgtcgtacag ctcgtcgggg ttctcgggat cgggccatgc
     4801 ttcatcgcgc acccgcccga ttgcctcctg gtccagcgct cccagattct cacccgaggt
     4861 cggctcgaac gcccggcggg tctggaccgc ttgggtgcga cgctcctcca gcggagcatc
     4921 gtcgaggaag gcgtagggct tggcgttcag gatctcatgc gccaggggcg acggctcggg
     4981 caggtcgcgc gccaggcagg cgacctcgcc ctgctggatc cgccgcagca gtccgaggaa
     5041 ccggtccagg tccatggcct cgtgcaggca gtcactcagg acctgctgca ccagcggatg
     5101 gtcggggatc tcccggtcgc cgggaatgtt ctcgagacag gccgcggcat cgggaaacgc
     5161 ggccgcgagc agatcgtccg cctccattcg ctgaatctgg ggcggcacct tgcggccccc
     5221 ttgaaagcgc ggcaccgcca gcgaaatgtt ggcgttccat cgccagcgcg tggcgaagac
     5281 cggtgcatcg agcagcgcct gcaccaggat atcctcggcc gattcgggat tgaggaatcg
     5341 gaagaccgtt tccaggggaa atgaatgctg cggtcccagg gaaagcagca ccgcctcttc
     5401 ggtggcggcg gcctgcagct cgaagttgaa ctggcggcag aaccgtttgc ggagcgccag
     5461 tccccaggcc cggttgaccc ggctcccgaa gggactgtgg atcaccagct gcatcccgcc
     5521 cgcttcgtcg aagaagcgct cggccaccag ggtttcctgg gtcggcagaa cgccgagcgc
     5581 gtttcgcgcc tgggacaagt actccaccat ctgagacgcg gcgaccggtg agatgccggt
     5641 gttctgctcc agccaccggg tagcgccatc ccgatcgccc agctgttcgc ccagatcgcg
     5701 ccggaggctg gagaccgata gcgacaattc cggactgcgc gcgggggctt cccccagcca
     5761 gaacgggata ccgggaggct ggccccgggc atcctccacc cgcacggtac cgcgctcgat
     5821 ccgcagcatg cgccacgacg tgttgccgag ctggaagatg tcccccgcca tgctctcgat
     5881 ggcgaagtct tcgttgacgg tgccgataaa ggtgccttcg ggctcgagga tcacgcggta
     5941 gtcggcgtta tcggggatgg caccgccgga catgagcgcc atcagacgcg ccccgcggcg
     6001 tcctcgaatc cgccggttca cgatgtcgtg gtggatcagg gctgcgcgac gcccccggcg
     6061 ggtgacgtag ccatcggcga gcatcgcaac caccgcatcg aaatcggctc gcggcagatc
     6121 acgatagggt cgagcccgcc gcaccatctg atacaactgg tcggtacccc actgttcggc
     6181 ggcggtctcg gcgacgatct gctgggccag cacgtcgagc gattcctcat tcacgacgat
     6241 ccgatccagc tccccgcttc gcaccgatcg cagcaatgcg gcgcactcga tcagctcgtc
     6301 ccgggtgagc ggaaagagcc tgcccttggg ggtcgcgtgc accgtatgcc ccgaccgtcc
     6361 cacccgctgg aggaaggtcg agattcgccg aggcgagccc agctggcaca ccaggtccac
     6421 gtggccgatg tcgatgccca gttccagcga cgaggtggcg accagcgcct tcagccgtcc
     6481 ggtcttgagc cggtcctcgg cgtcgagccg cgcctccttg gacaggctgc cgtggtggga
     6541 ggtgactgcc tcctctccca atcgttccga gagatgccgc gccgcccgct cggccaggcg
     6601 ccgggtattc acgaatacca gcgtggtccg atgctcggcg accagctggg ccagccggtt
     6661 gtagatctct tcccagactt cggccgacat gaccgcctgc agtggggagc ccggcagctc
     6721 gagcgccagg tcgagatcgc ggcggtggcc ctcatctacg atgacgggca gacggcctga
     6781 cggactgacg gactgactcc ccggaccctt cccgtccgtc ggtccgtcgg tccgtccgcc
     6841 cgtcagccat gccgccacat cctcgaccgg cttctgagtc gccgacaatc cgatccgctg
     6901 caacggccgg cccaccacgt gatccagccg ttccagtgtc agcgccaggt gcgcgccccg
     6961 gcgggtctcc accaccgcat ggatctcgtc cacaatcacc gtccgcgcgg tccgcagcat
     7021 gttccggctc cgctcggcgg tgagcaggag gtacagggat tccggtgtgg tgacgagaat
     7081 gtggggcggg gtgcggagca tcgcggtccg ctcggcgctg gtggtgtcgc cggtgcggac
     7141 cgccgccgtg agatggggtg tgccgtggcc gagggcctcc gccatgcggc ggatctcccg
     7201 gcggggttcg gccaggtttt tgtgaatgtc cgcgctcagg gccttgagcg gcgagacgta
     7261 gatcacctgg acttcgtccg tcagcgtccc agccagcgat tgctgcagaa gcgagtccag
     7321 ggcaatcagg aaggcggcga gggtcttccc cgatccagtg ggcgccgcga tcagggtgtg
     7381 cgcaccggag cgaatggcct cccagccgcg gcgctgcgcc ggggtgggct gccccaaccg
     7441 ttcagtgaac cattgtccaa cgagtggatg aaacgctgac agcggcatgg cctcttagct
     7501 cttgcgcttc cctcgcatcc agacgtcctg accgatcccc atgacgatga aaccggtggc
     7561 ccggcccgcc tccagctcga agatcaccgg ggtttcctcg acatccacca ccttgccgcc
     7621 ttccatgaac gccggcacga actggtgggg cttatcggtc gggatgaact ccatggtgaa
     7681 cgagccccac gcgccatcca ttaccgcccg gagcgagccg ttggagtcaa tcagttcggc
     7741 tttcatctcg atggtcttgc cctcgacctc cgtcgtcacc gtgtagctac cgaggtacgg
     7801 tgccagctcg aggccccggg aagccacggc ggcgcggctg gactgcaccg cgatctcgag
     7861 cgggagaacc gctgtcgacc agcgcatccg gagggtcgcc ccgtcccggg ccacccgtgg
     7921 gaagtcaaat gtaagtacct cgaccggctc ctcgctccac tggggcgcga ccttgagggc
     7981 caggaacatc tcttccgctt tgggatgctg ggtatggaac agccgcgggt tctggtggag
     8041 gttgatggtc cattcaccgg gcgcggccat gatccagacg gagtacttcc ccgccggcac
     8101 ctcgcgaccg ttgagctgca ccggacggtt gacctcgatg gtggtggccc agttggctcc
     8161 cggagtccac gtgtgggtgg cccggaccac tttcccgaac acgctgtcgc gtccccgtaa
     8221 ttgcggccgg gcgtagtcga ccgtaatgac ggtgccgtcg accgtttgcg acaccgaacc
     8281 ccgttcgctg gcgcgaatct gagcggaagc gatcggcagc gaactgagtg tcagaccaac
     8341 ggcgaaaacg gcggccgctt tgaacaccac tacctccaga aaacagatgg tggcgatctt
     8401 ggacggtagg gcaccgtccg tccgaccgtc agtccgtccg cccgtcagct aagatgcgcc
     8461 gaactcggca tcgatcgccg cccggatccc gttcaaggac cagccctccc gattcaaccg
     8521 gtgggcgagc cgagcctgac cctgacagat gttgcattgc tgggccatgc cacctgcttc
     8581 gtaacaactc aacagcgaat agtttcccgg cgtctcggca cacccacaat agcagcggat
     8641 gccatcgacc acctggggga tctggcgcac caggtcgaag accggggcgg ccctggcatg
     8701 ctctagttgg gccgcgcgca ggacccggga ggcgtcgatg ccgggcctgg gatcgggatg
     8761 gggagccagc cgtggcgcga ccacgccccc ggccggggag tgtacccctc ccagggcgag
     8821 cagggcgccg ggaatcatca cgaggaattg tctgcgaccc cagagagaac cagccatccc
     8881 atggtcctgc aggttgccag ccgctgatag taagtgcggc cggcggtcag gaacaggtgc
     8941 cggcctcgct ggcggtttcc tcatggtacc ttctacgcca tccctgaccc accggattcg
     9001 cgactccatg cctcgtttca ccattgggac tctcctggga cttgccctgc ccctggggac
     9061 cggcttcgcg cagcgggccg aacgggtagc cggagcggtg cccgtttcgg gagtggtttt
     9121 cctcgatcgc aaccagaacg gcatccgcga cggcagcgag ccgggtttgc cgggcgttgc
     9181 cgtgtccgac caggtcggta tcactaccac cgatgactcc ggccggttcc ggttggacgc
     9241 cgcggggtac ggtctgcttt tcgtgacaca accggatggg tacctggtac gcggctcttc
     9301 ctggaggaga gccgaagccg ggcgagagct ggcgttttca atggtaccag ccgcggccgg
     9361 gtcgtccttt gccttcctgc acgcctccga cacccacatc cgggaggcga atctggctcg
     9421 gatgcagcgg ctgcggacca tcaccgattc cgtcggtccc gcctttgtgt tgatctcggg
     9481 tgatctggtc cgcgacgccc tgcgagtgag cgagaccgag gccaaggggt actacgatct
     9541 gttcgtggcc gagctgggcc gtttccgagt cccggtccac accgttccgg gaaaccacga
     9601 gattttcggg atcgagcgac accactcgct ggtaagccag agtcacccgc tgtacggcaa
     9661 gcggatgtat cgctcttatc tgggtcccaa ctaccactcg ttcacctacg ggggagtcca
     9721 cttcgtcgga ctcgatacgg tcgattacga cgatctctgg tacaacgggc acgtcgacag
     9781 cctgcagttg gggtggcttg cggccgacct cgcggcgctc aaaccaggca ccccggtcgt
     9841 caccttcaac cacatcccgc tggtcacggc cggtgaggtc atcgacggct tccgggatga
     9901 cggcccagcc gccaccacca tccggatcgg cggccggtgg ttcttccggc attccgtacg
     9961 gaacgccgcg gccatcctcg acgtcatcgg cccgcggctg gagctggccc tgggcggcca
    10021 tatgcaccgg cgggaaatgc tgcgcttcga gaccgcgttc gggtctcgcc ggttccacca
    10081 gaccgcggcg gtcaccgacc ccgatcgggg cgaaggcccc atggggatca gatcgggcgt
    10141 aaccctctat cgcgtaacca acggccgggt ggacgacggc accttcatcc ctctgaaccc
    10201 ttaacctcct tcgactcctt cgaccgtctt cgaccgtctt cgaccgtctt cgaccggact
    10261 agcatcgcca ccggaaatcg gccggccgaa agcgcgacaa agggtgtgcc ccggggccgg
    10321 gaagccgccg tctcccctg
//
LOCUS       DASWKS010000483         3665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1361938, whole genome shotgun sequence.
ACCESSION   DASWKS010000483 DASWKS010000000
VERSION     DASWKS010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3665
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361938"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VGA78_13720"
     CDS             complement(<1..373)
                     /locus_tag="VGA78_13720"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX9894983.1"
                     /translation="MIAHRGASGHAVENSLEAFRKAAELGADGVELDVHATSEGRFVV
                     FHDHSLPSGRLIRDLPTAEVRAHRLSNGEPIPFLEEVFGAIPGLAIWIEVKGLEPAWD
                     LALLSLIDAAPAPDRCAVHSFD"
     gene            605..1153
                     /locus_tag="VGA78_13725"
     CDS             605..1153
                     /locus_tag="VGA78_13725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9894984.1"
                     /translation="MTLPSPAPDASDAMLVSSYRAGDEQAATELVRRHAGPLGRFLYS
                     AGAPRGEIEDLVQETFIRAFRALGGWRGEATFRSWLFRIGGNLRKDLYRRERGKVVIS
                     IVDGDLADPADPGAETEAGDAEDRIRRGIGSLPRLQREVFLMRAQQGLEYDEIATALK
                     TTPGAARVHYHHAVKRLKEMIR"
     gene            1150..1653
                     /locus_tag="VGA78_13730"
     CDS             1150..1653
                     /locus_tag="VGA78_13730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894985.1"
                     /translation="MTPCSHLSDRMPAVGRGTAHWSPADEDHLAGCRDCSAEWNLVQA
                     TAGIGLEVERSLDRDTIASRVKAVLESSPAGPSPARRAGWLVPLAAVAAALLLLVWKG
                     SPEPGADGPTVVAASLLPELETLTSAELESMLQLLPRDGMAVPGLDSFEDLTEAEVSS
                     VLEDLEG"
     gene            1656..2147
                     /locus_tag="VGA78_13735"
     CDS             1656..2147
                     /locus_tag="VGA78_13735"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX9894986.1"
                     /translation="MTSRFIGVLLAGSVLVLPALSLSAQQGPRAAALRRELEVRFAQQ
                     LKQQLQLSDEQSVKVRDIMSGYAEQRRVLEQEERNLRQGLNGQLRPGVAANPDSVTKL
                     VDAISAGRVSYARLIQDEMRDLAAVLDPVQRGQLFVMRDRLLLRVQEMREQARQRGGP
                     PRG"
     gene            2187..3506
                     /locus_tag="VGA78_13740"
     CDS             2187..3506
                     /locus_tag="VGA78_13740"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX9894987.1"
                     /translation="MGRLTLLLVAAVSAVTVAEGQQQVYRIPVTGTIENGLAPFIARA
                     LREAADAKAAAAILDLDTPGGRVDAAERIVDAVRASTIPVYAFVNPRAFSAGAMIALS
                     TKGIYMTPGGVMGAATPVDGAGTKAPEKYVSAMRAEFRALAEANGLDPKIAEGMVDES
                     LEIPGVKPAGQLLTLSTSEALKVGFAKGEVKDFDGLLDAVMLDGAQVVQVTPNWAELV
                     VRFLTHPMVSPLLLSLGMLGLIFEIKAGAFGLGGLISLASLGLFFGSHLLLGLAGWEE
                     VLLLGIGLIALGVEVFLLPGFGVAGIIGIVLIVGSMLLSLVGGGPSVGDFVQAGAILG
                     VSFVVTGAVLFGWLRHLPNSTRWSGLFLRDGSHSGEGFVSALPRNDLVGRVGIASTDL
                     RPSGTATVDGERLDVVTEGDFVLAGAPVKVIRSEGYRHIVRPASNGA"
BASE COUNT          573 a         1145 c         1268 g          679 t
ORIGIN      
        1 ggtcgaagga atgcaccgcg caccggtcgg gagctggagc ggcatcgatc aacgacagga
       61 gggccaggtc ccaggccggt tcgagtccct tcacctcgat ccagatggcc aaccccggga
      121 tcgccccgaa aacctcttcc aggaacggaa tcggctcccc attggacagc cggtgagccc
      181 gaacctcggc cgtcggcagg tcacggatca acctgccgct ggggagcgaa tggtcgtgga
      241 acaccacgaa acgcccctcg ctggtcgcgt ggacgtccag ctccacccca tcggccccca
      301 gctcggcggc ctttcggaac gcctcaagtg aattctccac cgcgtgcccc gaggctcccc
      361 ggtgggcgat cacgagcggg cgatgacgga ttgcagccaa tgtggaaagc tcagtcggtt
      421 atgttgataa atcaggtaat ctgtcaaatg taaagttctt ggtatataat cagttacccg
      481 acatttcaac aaggcctaat tcgataatct acgcttgcta tctactcagt actcagtcct
      541 cagtcctcag tactcggttg gtaggtttaa ccgatgatcg ggcaatccgt ctgatgtttt
      601 gccaatgacc ctgcccagcc ccgcacccga tgcatcggat gccatgctgg tttcctcgta
      661 ccgtgcgggg gacgagcagg cggcgaccga gctggtgcgg cggcatgccg gtcccctggg
      721 ccggttcctc tattcggcgg gggcgcctcg gggcgagatc gaggacctgg tccaggagac
      781 cttcatccgg gccttccggg ccctcggcgg ctggcgcggc gaggccacat tccggagctg
      841 gctcttccgg atcgggggga acctcaggaa ggacctgtat cggcgggagc ggggcaaggt
      901 ggtgatctct attgtcgatg gggatctcgc ggatccggcc gacccaggtg ccgagaccga
      961 ggcgggcgat gccgaagacc ggattcggcg gggaatcggg agtctgcccc ggcttcagcg
     1021 ggaggtgttt ctgatgcggg ctcagcaggg cctggagtac gacgagatcg cgacggcgct
     1081 caagaccacg ccgggtgccg cgcgggttca ctaccatcac gcggtgaagc ggttgaagga
     1141 gatgatccga tgactccctg ttctcatttg tccgatcgga tgccggccgt agggcggggg
     1201 acggcgcact ggtcgccggc cgacgaggat catctggcgg gttgccggga ctgctccgcc
     1261 gaatggaacc tggtgcaggc caccgccgga atcgggctcg aggtcgagcg ttcgctggac
     1321 cgggacacga ttgcctcgag agtgaaggcg gtcctggagt cttcgccggc cggtccgtct
     1381 ccggcccggc gggctggctg gctggtgccg ctcgcggcgg tggcggcagc cctactgctg
     1441 ctggtgtgga agggctcgcc tgagccgggg gcagacggcc ccacggtggt cgcggcctcg
     1501 ctgctccccg agctcgagac gttgaccagc gcggagctgg aatcgatgct gcagctgttg
     1561 ccgcgcgacg ggatggcggt accggggctc gacagctttg aagatctcac cgaggcggaa
     1621 gtatcatcgg tcctcgagga cctggagggt taggcgtgac ttcacgattc ataggtgttc
     1681 tactagcagg ctcggtcctg gtccttccgg cgctttcgct ctcggcccag caaggtccgc
     1741 gggcggcggc gctccggcgc gagctcgagg ttcgtttcgc gcagcagctc aagcaacagc
     1801 tccagttgag cgatgagcag tcggtcaagg tgcgggacat catgagcgga tacgccgagc
     1861 agcgtcgggt cctggagcag gaggagcgga atctgcgcca gggcttgaat ggccaactgc
     1921 ggcccggagt cgcggccaac cccgacagcg tcaccaagct ggtggacgcc atctcggccg
     1981 gccgggtcag ctacgcccgc ctgatccagg atgaaatgcg cgacctggcc gcggtgctgg
     2041 atccagtgca acggggccaa ttgttcgtga tgcgcgaccg cctgctgctg cgggtccagg
     2101 agatgcggga gcaggcccga cagcgcggag ggccgccgcg gggctaacac ggtatatttc
     2161 tcacgtcctt gacgtggagc taggccgtgg gtcgtctgac actcctgctg gttgccgccg
     2221 tctccgccgt gaccgttgcg gaggggcagc agcaggtcta tcggattccg gtcaccggta
     2281 cgatcgagaa cggcttggcg ccgttcatcg cccgggcgct gcgtgaagct gccgacgcca
     2341 aggcggccgc ggccatcctg gacctggata ccccgggcgg tcgggtagac gccgccgagc
     2401 ggatcgtcga cgcggtccgc gcgtccacca tcccggtcta tgccttcgtc aatccccgcg
     2461 ccttcagcgc cggggccatg atcgctctct cgaccaaagg catttacatg acgccgggcg
     2521 gcgtcatggg agccgctaca ccggtggatg gcgccggcac caaagcgccc gagaaatacg
     2581 tgtcggccat gcgggccgag ttccgcgccc tggccgaagc caacgggctc gatcccaaga
     2641 tcgccgaagg catggtcgac gagagcctgg aaatcccggg cgtcaagccg gcggggcagc
     2701 tgctcacgct ctcgaccagc gaggcgctga aggtcgggtt cgccaagggc gaagtgaagg
     2761 acttcgatgg cctgctcgat gccgtgatgc tggacggcgc ccaggtggtc caggtcacgc
     2821 cgaactgggc cgagttggtg gtgcggttcc tcacccatcc catggtctcg ccgctgttgc
     2881 tgtcgctcgg catgctgggt ctcattttcg agatcaaggc cggcgccttc ggcctgggcg
     2941 ggttgataag cctggcctcg ttagggctct tcttcggctc ccacctgctg ctcgggctgg
     3001 ccggatggga agaggtgctg ctcctgggga tcggcctgat cgcgctgggg gtggaggtct
     3061 ttctcctgcc gggcttcggg gtggccggca tcatcggtat cgtgctgatc gtcgggtcca
     3121 tgctgctgtc tctggtcggg ggcgggccca gcgtggggga ctttgttcag gccggagcca
     3181 ttctgggggt ctccttcgtc gtgaccggcg cggtgctgtt cgggtggctc cgccatctgc
     3241 ctaacagcac ccgctggagc gggctcttcc tgcgcgacgg ttcccattcg ggagaaggct
     3301 tcgtctcggc cctgccgcgc aacgacctgg tgggccgggt gggcatcgcc tctaccgacc
     3361 tgcgcccctc gggcaccgcc accgtcgacg gcgagcggct cgacgtggtc accgaaggcg
     3421 atttcgtgct ggccggggcc ccggtgaagg tgatccggtc cgagggatat cggcacatcg
     3481 taagaccggc ctcaaatggt gcatgatggc tgacgcatga tgccagcgtt ccaacttcct
     3541 tactgaggca actcaatgga tatcaacgcc ctcggcccgg gcattctgct ggtcctggtg
     3601 ttcctggcca tcctggccct ggtcatcttc ttccggttca tcccgatcgg gctctggatc
     3661 acggc
//
LOCUS       DASWKS010000484         3833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_255792, whole genome shotgun sequence.
ACCESSION   DASWKS010000484 DASWKS010000000
VERSION     DASWKS010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3833
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255792"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            204..734
                     /locus_tag="VGA78_13745"
     CDS             204..734
                     /locus_tag="VGA78_13745"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX9894988.1"
                     /translation="MPLATLHDLMVDQLKDLYHAERQELSALPRMAKTATTPALRSAL
                     DDHRQQTESHVARLEEAFALLGVPARGKPCKGMEGLLAEGKEILEEDGDDAVKDAGII
                     ASAQRVEHYEIAGYGCAIRFAGLLGHNDVAQLLGATLEEEKATDEKLTALAASDVNTR
                     AAHTLPTGSTRGEALH"
     gene            797..1039
                     /locus_tag="VGA78_13750"
     CDS             797..1039
                     /locus_tag="VGA78_13750"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEX9894989.1"
                     /translation="MVGTLTGSVSDRESKPQAEDIAENGQGVKDVTNQIRVTMIGGST
                     SGYGTTGTGMTGTGTSGTSETESSRSRSGSRAGTAT"
     gene            complement(1093..1242)
                     /locus_tag="VGA78_13755"
     CDS             complement(1093..1242)
                     /locus_tag="VGA78_13755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEX9894990.1"
                     /translation="MLTTIVVVLMLLWVLGLVGSYTFGGLIHLLLVLALVLVVIRFAQ
                     GRRVL"
     gene            complement(1280..1594)
                     /locus_tag="VGA78_13760"
     CDS             complement(1280..1594)
                     /locus_tag="VGA78_13760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894991.1"
                     /translation="MTGGDVPPVEGALSAERAAAARLRSSRRELDMRWAMGLAGTLLL
                     VFGLVVWLQGVEYTRDRTVIEVGPLEAKVEEERHIPRSVGVLAAIGGVALIAAGLAGR
                     RV"
     gene            complement(1723..2490)
                     /locus_tag="VGA78_13765"
     CDS             complement(1723..2490)
                     /locus_tag="VGA78_13765"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9894992.1"
                     /translation="MTNATTDSTTTASRGRILLADDEPTFVEATAELLRLENYECDTV
                     SDGRTALERIAQATYHLLISDLMMPGNDDLSLIRQLAERAGGLPVIILTAYPSTRTAI
                     ASIELPVTAYMVKPVSFGDLLGKVDVAVSRFRAFSAMREAEQRLRECGQALHSISETS
                     VATGPSGETVDAFLALTLRNVMGSLNDLEHLGRALTRQTRVEGPHPCQLINCPRGLQL
                     RDAIQETVRVLEETKGSFRSKTLGTLRRQLELLLEYN"
     gene            complement(2505..>3833)
                     /locus_tag="VGA78_13770"
     CDS             complement(2505..>3833)
                     /locus_tag="VGA78_13770"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9894993.1"
                     /translation="NEPPPTLEAWTGLIHPEDLPQVQAAIRDHLNGGTDALVMEYRIR
                     AADGSWHWLVDRARVVERTALGKPALVLGIYADITERRAAADALRASEQRFRTMFDST
                     FQFQALLDLDCTLLEANRTALDFAGVRLEEVRGRPLWETHWWAGSSERESRLEGACAD
                     ARQGRTVQYQEDVSGAAGRIATVEFSVKPVLDADGKVIQLLAEGRDITEHKRVEDALR
                     AVDALSTLGRLAARVAHEINNPLAGIKSSFLLVKDAVPPTHRYHRYVGAIEREIDRIA
                     MVTRELYGMYRAELAEKNESAVAVVISDAVALLNQLNRATSVRIHTDTSRAPAILPHP
                     DALVRQVVFNLIQNAVEASPPNGSVGVTAWTENGTFCLSVQDDGPGVPPVMRERIFDD
                     FVSTKTGLTTGGMGLGLSIVRRSLRALRGEIEIHDAPGGGADFRVRLPLA"
BASE COUNT          664 a         1305 c         1287 g          577 t
ORIGIN      
        1 cgtgcagccg ctccatgatg gggcacccgc gtgcggttga cacgcgtgag ggcgggactt
       61 agcgtagaac aaaaccggca ccgatcggcc gatccggtgt cgaccttgtc ggatgaggct
      121 ggtgcctcac caggtgaagg cgcacgacgg cgggagggag ccgccggtgc gcctttggtc
      181 gtttcatagc cccggaggaa cccatgccgc tggcgaccct gcacgatctc atggtggatc
      241 agctcaaaga cctgtatcac gcggaacggc aggagctctc ggccctgccc cgaatggcca
      301 agaccgccac gacgccggcg ctgcgcagcg cgctggacga tcaccggcag cagaccgaaa
      361 gccacgtggc ccggttggaa gaggccttcg ctcttctggg ggtgccggcc cgcggcaagc
      421 cctgcaaggg gatggaaggg ttgctggccg aggggaagga aatactggaa gaagatggcg
      481 atgacgcggt caaagatgcc gggattatcg cgtcggctca gcgggtggaa cactacgaga
      541 tcgcgggcta cggctgcgcc atcaggttcg ccggcctgct gggccataac gatgtggcgc
      601 agctgctcgg tgccacgctc gaggaggaga aggcaaccga cgagaagctg accgcgctgg
      661 cggcatcgga cgtcaacacc cgggcggccc acacccttcc gaccggctcc actcgcgggg
      721 aggcgctgca ctagctggcc cggccagcgg tgaaccgttc ccgccgcccc ccgggcgccg
      781 accgggtgga tacgcggtgg tcggtaccct caccggttcc gtgagcgacc gcgagtccaa
      841 gccgcaggcg gaggatatcg ccgagaacgg gcagggtgtg aaggacgtga ccaaccagat
      901 ccgagtgacc atgattggcg gtagcaccag cggctacggc accacgggca cggggatgac
      961 tggaaccggc acttcgggca ctagtgaaac cgaaagctca cggtctcgct cgggcagccg
     1021 ggccggcacc gcgacctgag ccagggaggg tggggcggtc gcgccggaac gcgaccgccc
     1081 catgaccggg cctcacagca cgcgccgtcc ctgcgcaaac cggatcacga cgagcaccag
     1141 cgccaacacc agcagcagat ggatcagacc gccgaacgta tagctcccca ccagacccag
     1201 cacccagagc agcatcagca ccacgacgat agtggtaagc atcatgtcct ccttggggac
     1261 cgccgcgtga accggtcaat caaactcgcc ggccggcgag gccggcggcg atgagcgcga
     1321 ctcctccgat ggccgccagc accccgacgc tccgcgggat gtgacgctct tcttcgacct
     1381 tcgcctcgag cgggcccacc tcgatcacgg tgcggtcccg ggtgtactcc acgccctgga
     1441 gccagaccac cagcccgaat accagcaaca gggttcctgc caggcccatg gcccaccgca
     1501 tatcgagctc cctccgggac gaacgaaggc gcgccgcggc ggctcgctcc gccgacaacg
     1561 cgccttcgac tggtgggacg tctccacccg tcaagacgac ctccgctcgc agtcggaggc
     1621 tggtataacg gttcaccgtg gcaaaccgtc cgtattacca gacgactacc gggccctttc
     1681 cttcacgtcg ccggcggtgc ccgaaagccg cccaatggaa catcagttgt actccagcaa
     1741 gagctccagc tggcgccgga gcgtccccag ggttttcgac cggaacgatc ccttggtctc
     1801 ctccagcacc cgcacggtct cctgaatggc gtcccgcagc tggaggccgc ggggacagtt
     1861 gatcagctgg caggggtggg gaccctcgac ccgggtttgc cgggtgaggg cccggcccag
     1921 atgctcgaga tcgttcagcg accccatcac gttgcgcagc gtgagggcca ggaaggcgtc
     1981 gaccgtctct cccgatggcc cggtggcgac cgaagtttcg gagatcgagt gcagggcctg
     2041 gccgcactca cgcagacgct gttccgcctc ccgcatcgcg ctgaaggcgc ggaaccggga
     2101 cacagccacg tccaccttgc ccagcaggtc gccgaaggac accggcttga ccatgtaggc
     2161 ggtgacggga agctcgatcg acgcgatcgc ggtccgggtg gacggatagg ccgtcagaat
     2221 gatgaccggg agccccccgg cccgttccgc cagctgccgg atcaggctca agtcgtcatt
     2281 gcccggcatc atcaggtcgc tgatcaggag gtgataggtg gcctgggcga tccgttccaa
     2341 cgcggtcctg ccgtcggaca cggtatcgca ctcgtagttc tcgagccgga gcagctcggc
     2401 ggtggcctcg acgaaagtcg gctcgtcgtc ggccagcaga atgcgtcccc ggctcgcggt
     2461 cgtggtggag tccgtcgtgg cgttcgtcat gggtggctct ctcctcaggc caggggcagc
     2521 cgaacccgaa agtcggcacc gcctccgggc gcatcatgga tctcgatctc tccgcgcagc
     2581 gcccggaggg aacgccgcac gatcgaaagc cccagcccca tacccccggt ggtgaggccc
     2641 gtcttggtgc tgacgaagtc atcgaaaatc cgctcccgca tgaccggcgg gacaccgggt
     2701 ccgtcatcct gcaccgagag gcaaaaggtg ccgttctcgg tccaggcggt gacgccgacc
     2761 gagccgttgg gcggcgaggc ttccaccgcg ttctgaatca ggttgaatac cacctgccgc
     2821 accagcgcat cgggatgcgg caggatggcc ggggcgcggc tggtatcggt gtgaatccgg
     2881 accgaggttg cccgattgag ctggttgagg agcgcaaccg cgtccgagat caccaccgcg
     2941 accgcgctct cgttcttctc ggccagctcg gcccggtaca tgccgtacaa ttcgcgggtc
     3001 accatcgcga tacgatcgat ttcccgctcg atggcgccca cgtagcgatg gtaccggtgg
     3061 gtgggcggca cggcatcctt gaccagcaga aacgagctct tgatcccggc cagcggattg
     3121 ttgatctcgt gggcgacccg ggccgcgagg cggcccaggg tgctcagggc atcgaccgcc
     3181 cggagggcgt cctcgacccg tttgtgctcg gtgatgtcgc ggccttcggc cagcagctgg
     3241 atgaccttcc cgtcggcatc gagcaccggc ttcaccgaga actccaccgt cgcaatccgc
     3301 ccggccgcgc cgctgacgtc ctcctgatac tggacggtac ggccctgccg ggcatcggcg
     3361 caagcgccct cgagccggga ctcccgctcg ctggagccgg cccaccaatg ggtctcccag
     3421 agcgggcggc cccggacctc ctccagccgg acgccggcga agtcgagcgc ggtgcggttg
     3481 gcttccagca gggtgcagtc gaggtcgagc aaggcctgga actggaaggt gctgtcgaac
     3541 atggtgcgga agcgctgttc gctggcgcga agcgcgtcgg cggcggcccg gcgctcggtg
     3601 atgtcggcgt agatgcctaa caccagggct ggcttgccca gcgcggtgcg ctccaccacc
     3661 cgagcccgat ccaccagcca atgccagctg ccatccgccg cccggatccg gtactccatc
     3721 accagggcgt cggtgccgcc gttcaggtga tcgcgtatgg cggcctgcac ctgcggcagg
     3781 tcctcgggat ggatcaatcc ggtccacgcc tccagtgtcg gaggcggctc gtt
//
LOCUS       DASWKS010000485         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2127405, whole genome shotgun sequence.
ACCESSION   DASWKS010000485 DASWKS010000000
VERSION     DASWKS010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2127405"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VGA78_13775"
     CDS             <1..304
                     /locus_tag="VGA78_13775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9894994.1"
                     /translation="KYYDPEHRSMFGLHTWRRYLHLVAAVTRAPIAGREKVRLYRFLA
                     RRTVRDRERLWREVRVFIGLPAPSPTAGASPLPPVPGLPQPTPLAHRADEAVRRAS"
     gene            complement(255..707)
                     /locus_tag="VGA78_13780"
     CDS             complement(255..707)
                     /locus_tag="VGA78_13780"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX9894995.1"
                     /translation="MRLREFLEPDAIDLDLRGSERDEVFVHLVGLLRLGEKQADTVVR
                     QLIRREVLGSTGFGQGIAIPHCRTLAVTRLRLAFGRHPTGIAMQAMDGQPVRAFFLIV
                     APPMEVSNQYLPVLGRIAQFVREPEIPGRLASLSSPDELLRLLDERGA"
     gene            789..1772
                     /gene="dusB"
                     /locus_tag="VGA78_13785"
     CDS             789..1772
                     /gene="dusB"
                     /locus_tag="VGA78_13785"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEX9894996.1"
                     /translation="MRLPYAPSIQTPLVLAPMAGVSEAPFRQICRRLGADVLMTEFLA
                     AEAIKRGIRKTLEGCEFEPVERPIGIQIYGADPDAMARAAAIVTEAYQPEFIDINFGC
                     PVKKVVQRNGGSGCLRDLGLVQRIIRDVCAATHVPVTVKSRSGWSEESRDPVGIALRM
                     QDAGAQAFTLHPRTRTQMFSGHADWDEVARVVEALGIPVIGNGDIQTADDAARMRRHT
                     GCAGLMIGRASFGNPWIFRDARALLNGQARPAAPSAAQRFVLALEHAQLALRLQGDSR
                     KTVIEFRKHLGWYTRGLPGASALRERLFQVDSMAQAAGVFDAYLEPVATAA"
     gene            1769..>2366
                     /gene="larB"
                     /locus_tag="VGA78_13790"
     CDS             1769..>2366
                     /gene="larB"
                     /locus_tag="VGA78_13790"
                     /inference="COORDINATES: protein motif:HMM:NF033503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HEX9894997.1"
                     /translation="MNRSLLEVLLADVAAGRVSPRDAFERLRHFPSEDLGFATLDHQR
                     AIRQGHPEVVFCEGKTVEQVVTLCERLLGVAGGFLATRASPAQAEAVLQRLPGTRWDV
                     SGRTLWRPPDERAAPRGSPVLVITAGTSDLPVAAEAAVTAEAWGARVEQLNDVGVAGL
                     HRLLSHNELLAVAGAIVVVAGMEGALPSVVGGLVDVPVI"
BASE COUNT          360 a          778 c          846 g          382 t
ORIGIN      
        1 caagtattac gatcctgagc accgctccat gttcggcctc cacacctggc ggcgctacct
       61 ccatctggtc gcggcggtaa cgcgggcccc gatcgccggg cgggagaagg taaggctgta
      121 tcgctttctg gctcggcgga cggtacggga tcgggaacgg ttgtggcgcg aggtccgggt
      181 gttcatcggg ctgccggcgc cttcgcccac cgccggcgcg agtccgctcc ctccggttcc
      241 cggactaccc cagcctacgc ccctcgctca tcgagcagac gaagcagttc gtcgggcgag
      301 ctgaggctcg ccagccggcc cggtatttcg ggctcgcgaa cgaactgcgc gatccgtccc
      361 agcaccggca ggtactggtt ggatacctcc atggggggcg caacgatcag aaaaaaggcc
      421 cgcaccggct ggccatccat cgcctgcatc gcaatgccgg tcgggtgacg cccaaaggcc
      481 aggcgcaggc gggtgaccgc cagagtacgg cagtgcggga tcgcgatccc ctgcccgaac
      541 ccggtcgacc cgagcacctc acgccggatg agctggcgga ccaccgtgtc ggcctgtttc
      601 tctcccagcc gtaacaaccc gaccaagtga acgaacacct cgtcccgctc gctgccgcgg
      661 aggtcgaggt cgatcgcatc gggttcgagg aattcccgga gccgcatggc ggaaacgtaa
      721 cccgcgaggg aggagccggt caaaactcgg gcgttgccgt gggtccggtc gctaactagc
      781 tttgcgatat gaggttaccg tacgcaccct cgatccagac accgctggtc ctggccccca
      841 tggcaggagt gtcggaagcg ccgttccggc agatctgccg ccggctgggg gccgacgtcc
      901 tcatgaccga gttcctggcg gccgaagcga tcaagcgcgg aatccggaag acgctggaag
      961 gctgcgagtt cgagccggtc gagcgtccca tcggcatcca gatctatggc gcggaccctg
     1021 acgccatggc gcgggcggca gccatcgtga ccgaggccta tcagccggag ttcatcgaca
     1081 tcaacttcgg ctgtccggtc aagaaggtgg tgcaacggaa cggcgggtcc ggatgtctcc
     1141 gcgatctggg gctggtgcaa cgcatcatcc gggacgtgtg cgccgcgacc catgttccgg
     1201 tgacggtgaa gtcccgcagc ggctggagcg aggagagccg ggatccggtg gggatcgcgc
     1261 tgcggatgca agatgcgggt gcccaggcgt tcaccctgca cccgcgcacc cgcacccaga
     1321 tgttttcggg tcacgccgac tgggacgagg ttgcgcgggt ggtggaggcg ctgggcattc
     1381 cggtgatcgg caacggcgat atccagaccg ccgacgatgc ggcgcggatg cgccgccaca
     1441 ccggctgcgc cggtctcatg atcggccgcg cctcgttcgg gaacccctgg atcttccgcg
     1501 atgcccgggc attgctcaac ggccaggcca ggccggccgc gccgtccgcc gcccagcggt
     1561 tcgtgctggc cctggagcac gctcagctgg cgttgcggct ccagggggat tcccgaaaaa
     1621 ccgtgatcga gttccgcaag cacctgggct ggtacaccag gggtctgccg ggcgcctcgg
     1681 cgctacgcga gcgcctcttc caggtggaca gcatggcgca ggccgccggc gtgtttgacg
     1741 cctatctgga gccggtcgcc accgccgcgt gaaccggagc ctgctcgaag tcctgctggc
     1801 cgatgtggcg gcggggcggg tgagcccccg cgacgcgttc gagcggctgc gccacttccc
     1861 atccgaagat ctcggatttg ccaccctgga tcaccagcgg gccatccggc agggtcatcc
     1921 cgaagtcgtg ttctgtgaag gcaagacggt ggaacaggtg gtgacgctgt gcgaacgcct
     1981 gttaggcgtc gcgggcgggt tcctcgccac ccgggcctcg ccggcccagg cggaggccgt
     2041 gttgcagcgg ctgcccggca cccgctggga tgtctcgggc cgaactttgt ggcggccgcc
     2101 ggatgagcgg gccgcacccc gggggagccc ggtgctggtg attaccgccg gcaccagcga
     2161 cctcccggtc gcggccgagg ccgccgtcac cgcagaggcg tggggcgcgc gggtcgagca
     2221 gctcaacgat gttggtgtgg cagggctgca tcggctgctg tcgcataacg agctgctggc
     2281 ggtcgcgggg gcgatcgtgg tggtcgcggg gatggagggt gctctgccga gcgtggtggg
     2341 tggcctggtt gatgtgcctg tcatcg
//
LOCUS       DASWKS010000486         3611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3561571, whole genome shotgun sequence.
ACCESSION   DASWKS010000486 DASWKS010000000
VERSION     DASWKS010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3561571"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1297
                     /locus_tag="VGA78_13795"
     CDS             <1..1297
                     /locus_tag="VGA78_13795"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9894998.1"
                     /translation="YTSTTPVDAYRGAGRPEATYLLERLVDLYSRKIGQDPVEVRRRN
                     LIAKDRFPYTTATGLTYDSGDYAGALDKALGIIDYPAFRAEQDRARRNGRYLGIGVTT
                     YCEICGLGPSQVAGAVGFGGGLYDSAVVRVYPTGVVRVYIGGKPHGQGEETTFAQIVA
                     DELGLPIESVEIVSGDTETTPQGWGTYGSRTTAVCGTAVFNATRKVKDKAKRIAAHLL
                     EAGEEDLEWRDGKFQVKGTPSRSKTFGDAALMANVAWNLPPDTEPGLEASAFFDPTNF
                     VYPFGTHVATVEVDRETGAVTVLRYLAVDDCGPQINPTIVQGQVHGGVVQGIGEALQE
                     LAVYDEDGQLLTGTMMDYAVPRASQMPHIETDHTVTPSPVNPLGVKGVGETGTIASAV
                     TIVNAVCDALAPLGITHIDKPLTPARVWAAMQQANGGAR"
     gene            1294..2148
                     /locus_tag="VGA78_13800"
     CDS             1294..2148
                     /locus_tag="VGA78_13800"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX9894999.1"
                     /translation="MIPASFEYARARTLAQALKAVASDDTKLVAGGQTMIPLLRFRLA
                     APKRLVDISGIAQLQGIKRTPAGLRIGAGSTYRELLDSPLVGSDAPLIAEVAQHVGDR
                     QVRNLGTLGGGLVHADPASDMPAVMLALDVTFNLLSQTGKRSVAAREFFTSAFTTAMQ
                     PDELLVDLVVPKLPKGAGSAYATFEQPASGYALTAAAAVVAKSKGTITHAALAFTGLA
                     DHAFRVEAAASLIGTPGDAGAVAAVADHAADGVEPNDDIHASAAYRRHLAGVAARRAL
                     TQAIERAR"
     gene            2152..2604
                     /locus_tag="VGA78_13805"
     CDS             2152..2604
                     /locus_tag="VGA78_13805"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEX9895000.1"
                     /translation="MRLEFDGSLAVNAPVRQVWDRLMDPGFVASCAPGVEGVETIDPT
                     HYRVKTLLGVGSIRVRFAMDLELADLMPPESARMIVRGTATGSAVQAESTVRLAAAEQ
                     DTRLDWTVSSEVRGTIASTGARLLKGTARKLTEQFWNTFAHRVAPPAS"
     gene            2607..3509
                     /locus_tag="VGA78_13810"
     CDS             2607..3509
                     /locus_tag="VGA78_13810"
                     /inference="COORDINATES: protein motif:HMM:NF019348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX9895001.1"
                     /translation="MAIPGSIDQVQAAFEAERYVADRDLATAIYLSLALRRPLLIEGE
                     AGVGKTEVARTLAAVLDTELIRLQCYEGLDLNTAVYEWDYPRQMLAIRLLEARGEAAA
                     AGTRAIFTEEFLLKRPLLRALEPPEGEPPVLLIDEIDRADEEFEAYLLEILSDFAVTI
                     PEIGTIRAARPPRVIVTSNRTREVHDALKRRCLYHWIDYPSAERERSILSVRMPDLPE
                     TLAREVVAFVQRLRSADLTKVPGIAETLDWAAALVALGAKRLEPEQIDRTLGALVKYQ
                     EDLSTLRGPTAALLLHEARASLAV"
BASE COUNT          576 a         1276 c         1239 g          520 t
ORIGIN      
        1 ctacaccagc accacaccgg tcgatgccta ccgcggcgcc ggccggcccg aggcgactta
       61 cctgctggag cggctggtgg atctctactc ccgcaagatc gggcaggatc cggtcgaggt
      121 gcgccgccgg aacctgatcg ccaaggaccg cttcccctac accaccgcca ctggcctcac
      181 ctatgactcc ggcgactatg ccggcgcgct ggacaaggcg ttaggcatca tcgactaccc
      241 ggcctttcgc gccgagcagg accgggcccg ccggaacggt cgctacctcg gcatcggggt
      301 caccacctac tgcgagatct gcgggctggg accctcgcag gtggccggcg cggtcgggtt
      361 cggcgggggc ctgtacgaca gcgcggtggt gcgggtctat cccaccggcg tggtccgggt
      421 gtacatcggc ggcaagccgc acgggcaggg ggaggaaacc accttcgccc agatcgtcgc
      481 ggacgagctg ggtcttccga tcgagagcgt cgagatcgtc tcgggagata cggaaaccac
      541 tccgcaggga tggggcacct acggcagccg gaccaccgcc gtctgcggca ccgcggtgtt
      601 caacgccacc cgcaaggtga aggacaaggc gaagcgtatc gccgcccacc tgctcgaggc
      661 gggcgaggaa gatctcgagt ggcgcgacgg caaattccag gtgaagggga cgcccagccg
      721 ctccaagacc ttcggcgacg cggccctcat ggccaacgtg gcctggaacc tcccccccga
      781 taccgagccc gggctcgagg cgtcggcctt cttcgatccc accaatttcg tctatccctt
      841 cggcacccac gtcgccacgg tcgaagtgga ccgggagacc ggcgcggtga cggtgctgcg
      901 ctacctggcg gtggacgact gcgggcccca gatcaacccc accatcgtgc agggccaggt
      961 gcacggcggc gtggtccagg gcatcggcga ggcgctccag gagctcgcgg tctacgacga
     1021 ggacgggcag ctcctcaccg gcaccatgat ggactacgcg gtgccgcgcg cgtcgcagat
     1081 gccgcacatc gagaccgatc acaccgtcac gccgtcgccg gtcaacccgt taggcgtgaa
     1141 gggcgtgggc gagaccggga ccatcgcgtc cgcggtcacc atcgtgaacg cggtctgtga
     1201 cgccctagcc ccgctcggca tcacccatat cgacaaaccg ctcaccccgg cccgggtgtg
     1261 ggccgccatg cagcaggcga acggaggtgc ccgatgattc ccgcctcgtt cgagtatgcc
     1321 cgggcccgga ccctggccca ggcgctcaaa gcggtcgcgt ccgacgacac caagctggtc
     1381 gcgggcggcc aaaccatgat tccgctgctg cggtttcggt tggcggcgcc gaagcgcctg
     1441 gtggacatca gcgggatcgc ccagctccag gggatcaagc gaaccccagc aggcctccgg
     1501 atcggcgcag gatcgaccta ccgcgagctg ctggattccc cgctggtcgg gagcgacgcg
     1561 cccctcatcg ccgaggtggc ccagcacgtc ggcgaccggc aggtccggaa cctcggcacc
     1621 ctggggggcg gcctggtcca cgccgatccc gcgtcggata tgccggcggt gatgctggcc
     1681 ctggacgtga ccttcaacct gttgtctcag accggcaaac ggagtgtcgc ggcgcgcgag
     1741 ttcttcacca gcgcgttcac caccgccatg cagccggacg agctgctggt cgacctcgtg
     1801 gtacccaagc tccccaaggg tgccgggtcg gcttacgcga cgttcgagca gccggcctcg
     1861 ggctacgccc tcacggcggc cgccgcggtg gtggcaaagt ccaaaggaac gatcacccac
     1921 gccgcgctgg ctttcaccgg tctcgcggat cacgccttcc gggtggaggc ggcggcgagc
     1981 ctgatcggaa cgccgggcga tgccggcgcc gtcgccgcgg tggccgatca cgcggcggat
     2041 ggggtcgagc ccaacgacga cattcacgcc tccgcggcct accggcgcca tctcgcaggc
     2101 gtcgccgccc ggcgggcgct aacccaggcg atcgagcggg cccgttaggc ggtgcggctc
     2161 gagttcgatg gctcgctcgc ggtcaacgcc ccggtccgcc aggtgtggga ccggctgatg
     2221 gacccgggct tcgttgcctc ctgtgccccc ggagtggagg gggtcgagac catcgacccc
     2281 acccactacc gggtgaagac cctgctcggc gtggggagca tccgggtccg gttcgcgatg
     2341 gacctggagc tggccgacct gatgccgccg gagagcgccc gcatgatcgt gcgcggcacc
     2401 gccaccggat cggcggtcca ggcggaatcg accgtccggc tggcagccgc ggagcaggac
     2461 accaggctcg actggaccgt cagctcagaa gtgcggggta ccatcgcgag caccggggcc
     2521 cggctcctca agggcaccgc ccgcaaactc accgagcagt tctggaacac cttcgcccac
     2581 cgggtggcgc cgccggcatc ctgaccgtgg caatccccgg ctccatcgac caggtccagg
     2641 ccgcgttcga agccgagcgg tacgtcgccg accgggacct cgcgaccgcc atctatctct
     2701 cgctcgcgct gcggcgaccc ctcctgatcg agggtgaagc cggcgtcggc aagaccgagg
     2761 tcgcccggac cctggccgcc gtgctcgata ccgaactgat ccggttgcag tgctatgagg
     2821 gactggacct gaacaccgcc gtgtacgagt gggactatcc ccgccagatg ctcgcgatcc
     2881 ggctgctcga ggcccggggc gaagccgccg ccgcggggac cagggcgatc ttcaccgagg
     2941 agttcctgct caagcggccg ctgttgcggg cgctcgaacc cccggagggc gagccgccgg
     3001 tgctgctgat cgacgagatt gaccgggccg acgaggagtt cgaggcctac ctgctggaga
     3061 tcctgagcga cttcgcggtc accattcccg agatcggcac cattcgggcc gcccggccgc
     3121 cccgggtgat cgtcaccagc aaccggaccc gggaagtcca cgatgcgctc aagcggcgtt
     3181 gtctctatca ctggatcgac tatcccagcg cggagcggga acgatcgatt ctgtcggtcc
     3241 ggatgccgga ccttcccgaa accctggctc gggaggtggt ggcgttcgtg cagcggctcc
     3301 ggtccgccga tctcaccaag gtgcccggca tcgcggagac gctggactgg gccgcggcac
     3361 tggtggcgct gggggctaag cggctggagc cggagcagat cgaccgcacc ctcggtgccc
     3421 tggtcaagta tcaggaggac ctgagcaccc tgcgcggccc caccgcggca ctgctgttgc
     3481 acgaagcccg cgccagcctc gcggtatgag tcagacgctg gtcgccaatc tggtggagtt
     3541 cggccgcgca ctccggaccg ccgggatggg cgtggtgccg gaacagaccc gccagttcgc
     3601 caagagtctg g
//
LOCUS       DASWKS010000487         6278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1363026, whole genome shotgun sequence.
ACCESSION   DASWKS010000487 DASWKS010000000
VERSION     DASWKS010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1363026"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1352)
                     /locus_tag="VGA78_13815"
     CDS             complement(<1..1352)
                     /locus_tag="VGA78_13815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX9895002.1"
                     /translation="MIVSPETAPPAPGTTGSTASTRARIGLADQRRLLSWLFAFRIGL
                     TTLVLVRAAVVWADTADASFYAALGVLLIFVITGYGAYRVLIQRVSPGVGFFFSQAVA
                     DLAVVSTLVRLGGDASSALAAMYIVVIAVYALLLPTWAGVAVALGAAGGYVLATLWEA
                     GAGLPAGLWGQLVVFGFVFLLVAVLGHRLQHTVAAQTRLETELRRVRFEASEILRSIK
                     TGVITVDGNGRLAFVNPAGERLLGISPGQLGLPVMSLLEQRSPELHAAIIAGLERGHR
                     VARGEGMVTGEKGPPFPIGLSTTTFEQTFDGLPAVTALFTDLSELKQLQELHLRAERL
                     EAVAALSASLAHEIRNPLASIRSSVEQLALSAQADDDERTLGRLIVKESDRLNRLLGE
                     FLDFTRVRAANFSVVNLHAVALETARLIRKRPECGDQLSLEVEGEATLIEADEDLVHR
                     V"
     gene            1460..1828
                     /locus_tag="VGA78_13820"
     CDS             1460..1828
                     /locus_tag="VGA78_13820"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEX9895003.1"
                     /translation="MRIDKWLWAARFYKTRALAALALDGGKVELNGERAKRARAVRPG
                     DRIRLRHGSYEYLLTVRAVSERRGPASVAVTLYQEDPESKDRRERLAEQHRLAATAFD
                     HGEGKPSKKQRREIRRLKGQ"
     gene            complement(1947..2594)
                     /locus_tag="VGA78_13825"
     CDS             complement(1947..2594)
                     /locus_tag="VGA78_13825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895004.1"
                     /translation="MIGRDSTHRRGFLGRAAALVAGAMATPKLLDAAVPAEDEWLNRI
                     TGTHRQLFDMPAEGGGVPMLHVLNYLNTYNSAYNVKDSDISAIGTFYGGITLFGLNDA
                     MWAKYRLGEFLNIKNASGQPATANPWRTEVHAFGMTLAPASIEALQKRGVIFLLCNNA
                     LGLFIGEVAKARSVERAAVDTDFRANILPGVTLVPAMVIAIEKAQSVKNVAYHRQ"
     gene            complement(2591..3463)
                     /locus_tag="VGA78_13830"
     CDS             complement(2591..3463)
                     /locus_tag="VGA78_13830"
                     /inference="COORDINATES: protein motif:HMM:NF044772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9895005.1"
                     /translation="MRALFFFLLMTLSAGCRVERLEPDAALPPLSIPGAVALLEPDDS
                     EMPEGPEGASIRRGRALLRFTPDSLPGYAGSGLSCTNCHLDDGTRPYAAPWVGVYGRF
                     PQYRSRNAKVNVIGDRINDCMQRSLNGRPLPFDGPDMRDMVAYMAFLSRRIPIGATMQ
                     GQGFAQLSALTTDSARGRQVFKSKCVKCHAKDGQGTEDGPPLWGPRSYTIGAGMARVR
                     TAAAFIHRNMPDDRPRTLTEQQAVDVAAYVNSQPRPDFTGKEHDWPNGDHPPDVPYLT
                     RAARAKADSSRRGT"
     gene            complement(3582..3869)
                     /locus_tag="VGA78_13835"
     CDS             complement(3582..3869)
                     /locus_tag="VGA78_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9895006.1"
                     /translation="MNSTSLARSARLFHALSDETRLRVLELLRDGERCVCDLSQAVGA
                     QQSRLSFHLRTLKEAGLVRDRRQGRWIYYAVRLEALDELELMLRPFRTSLA"
     gene            complement(3922..4593)
                     /locus_tag="VGA78_13840"
     CDS             complement(3922..4593)
                     /locus_tag="VGA78_13840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895007.1"
                     /translation="MRNLWTRIGLGAVFVFAAGMFFVTLGRQVKSSVVSTIEDGGRFR
                     VPLALIPFTIDHNRVGHIREVDVQKGRRGPNRINVTVRLKHQYDAEEYASCLFVIDSP
                     HTKGLFSCIPEDAAEAADYVAIGELRLSPGGLVRPLVVSRDNAHEWFDENDAEQVNLS
                     ATEQGAVIKVTDAEGTRRVDLTANSNGASLKVRDENGKEVVNLSATTNGPQVDVKKKA
                     DGSQQ"
     gene            complement(4768..>6278)
                     /locus_tag="VGA78_13845"
     CDS             complement(4768..>6278)
                     /locus_tag="VGA78_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEX9895008.1"
                     /translation="QSVAVAVVRRGDIVVLRPGERVPVDGDVIQGRSAVDESMLTGES
                     LPVEKKPGDRVIGATMNGTGALQYQATTLGSDSVLARIVRLMHEAQGSRAPIQRLADR
                     ISGVFVPIVILIAIATFGIWLIAADSAPVIRGFAAAVAVLIIACPCAMGLAVPTAVMV
                     ATGRGAQLGILIKGGEALQRAGAVSTIVLDKTGTVTEGRPSVTDVVLAGSSAAGSRDD
                     LLRLAASLESVSEHPLAAAIVREARREGVTLSVPENFDSLTGRGTVGMVDGAMIATGN
                     LALMADYAIEVGPVAEITEHLTALGRTPVYVAVNGELAGVIGVADPIRATSRQAVGEF
                     RRLGLEVVLLTGDHARTARAIGAEAGIDRIVAEVLPEAKVAEIRRLQVEGRVVAMVGD
                     GINDAPALAQADIGMAMGTGTDIAAEAGDVVLMRGDLQSAVQAIALSRRTMRTMKQNL
                     FWAFVYNVIGIPVAAGVLYPAFGILLSPILASAAMAFSSVSVVSNSLRLRTA"
BASE COUNT         1123 a         2104 c         2053 g          998 t
ORIGIN      
        1 acccggtgca ccagatcctc gtccgcctcg atcaaggtgg cttcgccttc gacctccagc
       61 gagagctgat cgccacattc gggccgctta cgaatcagcc gcgcggtctc cagcgcgacg
      121 gcatgcaggt tgacgacgga gaagttggcg gcgcgcaccc gggtgaaatc gaggaactcg
      181 cccagcagcc ggttcaaccg atcgctttcc ttgacgatca ggcggcccag cgtccgctcg
      241 tcgtcgtcgg cctgggccga cagcgcgagt tgctccaccg agctccggat cgaggcgagc
      301 ggattgcgga tctcatgcgc cagcgaggca ctcagcgccg cgaccgcttc cagccgctcg
      361 gcgcgcaggt gcagctcctg gagctgtttc agctccgaga ggtcggtgaa cagcgccgtc
      421 accgccggca gcccgtcgaa ggtctgctcg aacgtggtgg tggaaaggcc gatcgggaac
      481 ggaggcccct tctcaccggt gaccatgcct tcgccccgcg ccacccggtg cccccgctcg
      541 aggccggcga tgatcgccgc atggagctcg ggtgaccgct gctccaacag gctcatcacc
      601 ggcaggccca gctgtcccgg actgatgccg agcagtcgct ccccagcagg attgacgaac
      661 gccagccggc cgttcccgtc caccgtgatt acgccggtct tgatgctgcg gaggatctcg
      721 gaggcctcga accggactcg ccgcaactcg gtctccaggc gggtctgggc cgcgaccgtg
      781 tgctgcagcc ggtgccccag aaccgccacc agcagaaaaa cgaatccgaa gacgaccagc
      841 tggccccaga gcccggccgg gagaccggcc cccgcctccc acagggtcgc caggacatag
      901 ccgccggccg cccccagcgc cacagccaca ccggcccagg tggggagcaa caaggcatag
      961 accgcgatga ccacgatata catcgcggcc agcgcgctgc tggcgtcccc gcccagtcgg
     1021 accagggtgc tcaccaccgc gaggtcggcc acggcctggg aaaagaagaa cccgactccg
     1081 ggcgagaccc gctggatcag aacccggtac gccccatagc ccgtgatgac gaagatcagc
     1141 aggacaccta acgcggcgta gaatgacgcg tcggccgtat cggcccagac caccgcggcg
     1201 cgcaccagga ccagcgtggt cagcccgatc cggaacgcga acagccaact gagcagccga
     1261 cgctggtcgg ccagtccgat tcgcgcccgg gtggacgctg tcgaaccggt cgtgcccgga
     1321 gctggcgggg ccgtctcagg tgaaacaatc atcgcagtgc tggcctggga tcaggatggc
     1381 aagctaatat cacacactca aaggtaagtc gaaggcagtc gaggggggtc gaggggggtc
     1441 gaggagggtt atggatgagg tgcgaattga caaatggctc tgggccgcac ggttctacaa
     1501 gactcgggcg ctcgcggctc tggcgctcga tggcggcaag gtggagctca acggcgaacg
     1561 ggccaagcga gccagggcgg tgcgcccggg tgatcgtatc cgcctgcgac acggctccta
     1621 cgagtacctg ctcacggtgc gggcggtctc ggaacggcga ggccccgcct ccgttgccgt
     1681 cacgttgtac caggaggatc ccgagtccaa ggaccgccgg gagcggctgg ccgagcagca
     1741 ccggctggcg gcaacggcat tcgaccatgg tgaaggcaag cccagcaaga agcagcgacg
     1801 cgaaatccgg cgcctgaaag ggcagtaact gctgtcggaa ggtcgtacca agtcggaagg
     1861 gtcggaaaag gcggaagagt cggaatgtct cttgggaccc ttccgaccct tacgaccttt
     1921 ccgacaattc cgacccttag tccaggctac tgcctatggt aggcgacgtt cttgaccgat
     1981 tgcgccttct cgatcgcgat gaccatggcc ggcaccaggg tcacgccggg gaggatgttg
     2041 gcgcggaagt cggtgtcgac cgcggcccgc tccaccgacc gcgccttggc cacctcgccg
     2101 atgaagagac cgagcgcgtt gttgcacagc aggaaaatca cgccccgctt ctgcagcgcc
     2161 tcgatgctgg ccggtgccag cgtcatgccg aaggcatgca cttcggtccg ccagggattg
     2221 gccgtggccg gctggccgct cgcgttcttg atattgagga actctcccag ccggtacttg
     2281 gcccacatgg cgtcgttcag gccgaacaag gtgattccgc catagaaggt gccgatcgcg
     2341 ctgatgtcgc tgtccttgac gttgtaagcg ctgttgtagg tgttgagata gttgagcacg
     2401 tgaagcatcg gcacaccgcc gccctcggcc ggcatgtcga acagctggcg gtgcgttccc
     2461 gtgatccggt tgagccactc gtcctcggcc ggcacggcgg catcgagcaa cttcggtgtg
     2521 gccatggcgc ccgctaccag ggcggcagcc cggcccagga atccgcggcg gtgggtgctg
     2581 tctcgtccaa tcatgtcccc ctcctagatg agtcggcctt cgcccgggcc gcgcgggtca
     2641 gatacggcac gtccggcggg tgatcgccgt tcggccagtc gtgttccttg ccggtgaaat
     2701 ccggtctggg ttggctgttg acataggccg ccacgtcgac cgcttgctgc tcggtcaggg
     2761 tgcggggccg gtcgtcgggc atgttgcgat ggatgaaggc cgccgcggtt cggacccgcg
     2821 ccatgccggc gccaatggtg tagctcctcg gcccccagag cggcgggccg tcctcggtcc
     2881 cctgtccgtc cttcgcatga cacttgacgc acttggactt gaagacctgt ctcccgcgag
     2941 ccgagtcggt agtcagggcc gagagctggg cgaacccctg cccctgcatg gtggcgccga
     3001 tgggaatccg ccgggagaga aacgccatgt atgccaccat atcgcgcatg tcggggccgt
     3061 cgaacgggag cgggcggccg ttcagactgc gctgcatgca gtcgttgatg cggtcgccga
     3121 tgacgttcac cttggcgttg cgcgaccgat actgggggaa tcgcccgtag acccccaccc
     3181 acggagcagc gtaggggcgg gtgccatcgt cgaggtggca attggtgcag ctcaatccac
     3241 tgccggcgta cccgggcaag ctgtcggggg taaaccgcag cagggcccgg ccccgccgga
     3301 tcgaagctcc ctccggtccc tccggcatct ccgagtcatc cggctccagc agcgccaccg
     3361 ctccggggat ggacagcggc ggcaacgcgg catccggctc caggcgttcg acccggcacc
     3421 cggcggagag cgtcatcagc aggaagaaga atagggcgcg cattgcactg gattctgcgg
     3481 aagaatatgg gctaacccga cagggaggaa catcccgggg ggaatgctaa caacaccggt
     3541 cgaagtagtc gaaggggggc gaagccagtc gaacgatcag atcaagccaa tgaggtccgg
     3601 aacggacgca gcatcagctc gagctcatcc agggcctcga ggcgaaccgc gtagtagatc
     3661 cagcgtcctt gccgccggtc gcggaccagg ccggcttcct tgagggtacg caggtgaaag
     3721 gagagacgag attgctgggc cccgaccgcc tggctcaagt cgcaaacgca acgctcaccg
     3781 tcgcgcagca actccagcac tcgcagccgg gtctcgtccg agagggcgtg aaacaggcgc
     3841 gcgctccggg ccagagaagt ggaattcatg gcccggataa tacatcaacg tgtcttgatg
     3901 cagcaactgc cgcgacaaaa cctactgctg agagccgtcg gctttcttct tgacgtcgac
     3961 ctgcggcccg ttggtagtgg cgctcaggtt gacgacttcc ttgccgttct cgtcccgcac
     4021 cttgagcgac gcgccgttgg agttggccgt gagatccacc cggcgggtgc cctccgcatc
     4081 ggtcaccttg atgacggcgc cctgctccgt ggcggagagg ttgacctgct cggcgtcgtt
     4141 ctcatcgaac cactcgtggg cattgtcccg ggagaccacc agcgggcgaa ccagaccgcc
     4201 gggcgagagc cgcagctctc cgatcgcgac atagtcagcc gcctcggccg cgtcttccgg
     4261 gatgcagctg aagagtcctt tggtgtgggg cgagtcgatc acgaagagac agctggcgta
     4321 ctcctcggca tcgtactggt gcttgaggcg gaccgtgaca ttgatccggt tgggaccgcg
     4381 ccgccccttc tgaacatcaa cttcccggat gtggccaacc cggttgtgat cgatcgtgaa
     4441 cggaatcagg gcgaggggta cccggaagcg accgccatcc tctatggtgc tgaccacgga
     4501 actcttgacc tggcgcccca gggtcacgaa gaacatgccg gcggcaaaca cgaacaccgc
     4561 gcctaatcca atacgagtcc ataggttacg catggcagtt ccccatcgag aggagcaggc
     4621 gaccgccggt tggctgtcgt tacacagtgg gacgtttcaa tctgggaaaa ggtttcaggg
     4681 ccagcgccag cgcagagcgc tggggcgggt cgaaggggtc gaaggggtcg aaggcggtcg
     4741 aacgcggttc tacttcgacg ccttcgacta cgcagtacgg agccgcagcg aattggagac
     4801 cacgctcacc gagctgaatg ccatcgccgc gctggccaga atgggactca ggaggatccc
     4861 gaaggcggga tagaggaccc cggctgcgac cgggatcccg atgacgttgt agacgaaggc
     4921 ccagaacaga ttctgcttca tggtccgcat ggtgcggcgg gaaagcgcaa tcgcttgcac
     4981 cgcgctctgc agatcgcccc gcatcagcac tacgtctccc gcctccgcgg cgatatcggt
     5041 accggtgccc atggccatgc cgatgtcggc ctgcgccagg gccggagcat cgttgattcc
     5101 gtcacccacc atcgcgacta cccggccctc gacctgtaac cggcggatct cggctacttt
     5161 cgcctcgggc agcacctcgg ccacgatccg gtcgatgccc gcctccgcgc cgatcgcgcg
     5221 ggcggtccgc gcgtggtcgc cagtcagcaa caccacctcc agtcccagcc gccggaactc
     5281 gccgaccgcc tggcgcgagg ttgctctgat gggatccgcg acgccgatca ccccggccag
     5341 ctccccattg acggccacat agaccggcgt gcgacccagc gcggtcagat gctcagtgat
     5401 ctcagccacc ggcccgacct cgatggcgta gtccgccatc aacgcaaggt tgccggtcgc
     5461 gatcatcgcg ccgtctacca tcccgaccgt cccccgcccc gtgagtgagt cgaagttctc
     5521 cggtactgaa agggtcactc cttctcgacg ggcctcccgc acgatggcgg cggccagcgg
     5581 gtgttcgctg accgactcga gcgaagccgc gagacgcagc agatcatccc gtgaccctgc
     5641 cgccgaactt cccgccagga cgacgtcggt gacgctcggc cggccttcgg tcaccgtgcc
     5701 ggtcttgtcc agcacgatgg tcgagaccgc accggcccgc tgcagggctt cgccgccttt
     5761 gatcaggatg ccgagctggg ccccccttcc ggtcgccacc atgacggcag tgggtaccgc
     5821 caaccccatg gcgcagggac aggcgatgat gaggaccgcc accgcggcgg caaagccccg
     5881 aatcactgga gccgagtcgg ccgcgatcaa ccagatcccg aaggtggcga tggcgatcag
     5941 aatgacgatg gggacgaaga cgccgctgat ccgatcggcc agccgctgaa tcggagcgcg
     6001 ggacccctgg gcttcgtgca tcagccggac gatccgggcc agcacgctgt cactgccgag
     6061 cgtggtcgcc tggtactgga gggctccggt cccgttcatg gtggcaccga tgactcgatc
     6121 gcccggcttc ttctccaccg gcagtgactc gcccgtgagc atcgactcgt cgaccgcgct
     6181 gcggccctgg atcacgtccc cgtccaccgg gacccgctcc cctggccgca gcacgacgat
     6241 gtcgccccgg cggaccacgg ccaccgccac actctgct
//
LOCUS       DASWKS010000488         2772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2127671, whole genome shotgun sequence.
ACCESSION   DASWKS010000488 DASWKS010000000
VERSION     DASWKS010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2127671"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..758)
                     /locus_tag="VGA78_13850"
     CDS             complement(<1..758)
                     /locus_tag="VGA78_13850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895009.1"
                     /translation="MAWHSFAPRSLAWTGAALFALIALPAVSAGPLEAQILRRIKETV
                     KRAAEDETINHIDRLVRGKLRCVFDDLECIRKAEASGEGVVLTDDQGEILVDKNGQPV
                     SDSEQGAEIAQDRQVRPGEGVWANYDFVPGDDILYFDDYSGDRVGSFPRRMNFVRGNW
                     EVVEWQGRRLLRNSGPRYAAIEIPLPSALPDRFTIEFEVYMPHGNHRLAVATYSPAAD
                     GGNWTKLRGNFFQAGGSGPGSGVVTRERGGPEALT"
     gene            998..>2772
                     /locus_tag="VGA78_13855"
     CDS             998..>2772
                     /locus_tag="VGA78_13855"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895010.1"
                     /translation="MRRSNNVMWERWDEIDRILDQALELPEPERAAFVRGATSEDAEL
                     GDLVRRLVGRVHTGGQGRVARPDAAVVAAAFGVTPEQDERRFDLVPGTEIGRYIVLGR
                     RARGGMATVYEGERGDGVYQQKVAIKVLRRGLDTEDLIRRFRTERQILSSLTHPNIAR
                     LLDGGATAEGHPFLVMELVEGEAITRWADAHRLNLRARLDLFLGVAEAVHAAHQQLVV
                     HRDIKPSNIMVDPSGRVKLLDFGIAKLLDRGGEQTDGSLRALTPDYASPEQLRGEAIT
                     TATDVYQLGLLLRELLTGVRPLAADTQPGQAQLLPSRVAAQDLPRAEAPDARAAARST
                     TPVRLVKALRGDLDVIVGKALRQVPAERYASADELGADVRRYLKGLPILAHPESAVYR
                     ATKFAWRNRWSVAAAALAAVSLAAYAVTATVQGRRIAAASALAREEARTAEQVTDFLV
                     RLFQSGNPTVALSDTVTVLGILEEGARRIDTALAGEPEVRARMLLAIGTAFTGLGRYE
                     RADSMLTVALSLQRRLHGDDHARAADVLTAIGANHSLSRDFRAADQAHHEEFRVRTAA
                     GTVSDTSRARMFENMSLTRRELDDP"
BASE COUNT          433 a          962 c          981 g          396 t
ORIGIN      
        1 gtcaacgcct ccgggccacc ccgctcgcgg gtaacgacgc cggagcccgg tccgctccca
       61 ccagcctgga agaagttgcc ccggagtttc gtccagttgc cgccgtcggc cgcgggcgag
      121 taggtggcga ctgccagccg gtggttgcca tggggcatgt agacctcgaa ctcgatggtg
      181 aaccggtccg gaagggccga aggaagcgga atctcgatgg ccgcgtagcg ggggcccgag
      241 ttccggagca gccggcggcc ctgccattcg acgacctccc agttgccccg aacgaagttc
      301 atgcgccggg gaaagctgcc cacacggtca ccgctatagt cgtcgaagta gaggatgtca
      361 tcgccgggca cgaagtcgta gttggcccag accccttcgc ccggcctgac ctgtctgtcc
      421 tgggcgatct cggccccttg ctcgctgtcg gagaccggct ggccgttctt gtcaaccagg
      481 atctcgccct ggtcgtcggt caggaccacg ccctcaccgg acgcctcggc cttccggatg
      541 cactcgaggt cgtcgaagac gcagcggagc ttgccccgaa ccaggcggtc gatgtggttt
      601 atcgtttcgt cctcagccgc ccgcttgacg gtctccttga tccgtctgag gatctgggcc
      661 tcgagcgggc ccgcagagac ggccggaagc gcgatcaggg cgaacagggc ggcccccgtc
      721 caggccaggg accgaggggc gaaggaatgc caagccatgc ctacctcctt gcgggtgcca
      781 gcgccaagcc ctccgagccc tgaacgcact ccggccggtg gccccgccac caccgagcgg
      841 acaccggctg gaccacgacc cgggccggcc cggcgacggg ccggtatctc cggtggcgga
      901 gtccggcatc cgcttccgtt catcgatccg cagggaggca ccccgcgtcg cccacggccg
      961 ttccgtggag ccctggccac gttgacccgg actcgccatg cgccgatcga acaatgtgat
     1021 gtgggagcgc tgggacgaga tcgatcggat cctggaccag gccctggagc tgccagaacc
     1081 agagcgggcc gcgttcgttc ggggggccac ctcggaggac gccgagctcg gcgacctggt
     1141 ccgccggctg gttggccggg tccataccgg cggccagggc cgggtggcca gaccggatgc
     1201 ggcggtggtg gcagccgcat tcggggtcac tcccgagcag gacgagcgcc gattcgacct
     1261 ggtgcccggg accgaaatcg gccgctatat cgtcctgggc cggcgggccc ggggcgggat
     1321 ggccacggta tacgaaggcg agcgcggtga cggggtctac cagcaaaagg tggccatcaa
     1381 ggtcctgcgg cgcgggctcg ataccgaaga cctgatccgc cggttccgca ccgaacgaca
     1441 gatcctttct tcgctcaccc atccgaacat cgcccgcctg ctggatggag gggcgaccgc
     1501 ggagggccac cccttcctgg tgatggagct ggtggaaggg gaagccatca cccggtgggc
     1561 cgacgcccac cgcctgaacc tccgggcccg gctggacctg ttcctcggcg tggcggaggc
     1621 ggtgcacgcc gcccaccagc agctcgtggt gcaccgggac atcaaaccct cgaacatcat
     1681 ggtggatccg agcgggcggg tgaagctgct ggatttcggg atcgccaagc tgctcgaccg
     1741 cggaggggaa cagaccgatg gcagcctccg ggccctgact ccggactatg ccagccccga
     1801 gcagctccgg ggcgaggcga tcacgaccgc cacggacgtg taccagctcg ggctcctgct
     1861 ccgggagctg ctgaccggcg tccggccgct ggcagcagac acccagcccg gccaggcaca
     1921 gctcctcccc agccgggtgg cggcgcagga cctccctcgg gccgaggcgc cggacgcgcg
     1981 tgccgccgcg cgctcgacca cccccgtgcg cctggtgaaa gcgctccgcg gcgatctgga
     2041 cgtgatcgtg gggaaggccc tgcggcaggt tccggccgag cgctatgcct cggccgacga
     2101 gctcggcgcc gatgtccggc ggtatctcaa agggttgccg atcctcgccc accccgaatc
     2161 agcggtctac cgggcgacga aattcgcctg gcgcaaccgc tggagcgtcg cggccgccgc
     2221 gctggcggcg gtgtcgctcg ccgcctacgc ggtgaccgcg acggtgcagg gccggcggat
     2281 cgcggcggcg agcgccctgg cccgggagga ggcccggacg gcggagcagg tgaccgactt
     2341 cctggtccgg ttgttccaga gcggaaatcc gacggtggcc ctgagcgaca ccgtgaccgt
     2401 gctcggaatt ctggaagaag gtgcccgccg gatcgacacc gcgctcgcgg gcgagcccga
     2461 ggtccgggcc cgcatgctgc tggcgatcgg cacggccttc accggacttg gtcgttacga
     2521 gcgggcggac agcatgttga cggtggcact cagcctgcaa cggcgcctgc acggagacga
     2581 ccatgcgcgg gcggcggacg tcctgaccgc catcggggcg aaccactcgt tatcacgtga
     2641 tttccgggcg gcggatcagg cccaccatga agagttccgc gtccgaacag cggcggggac
     2701 ggtgtccgat acgtcccggg cgcgcatgtt cgagaacatg agcctgaccc gacgcgagct
     2761 cgacgacccg ga
//
LOCUS       DASWKS010000489         4024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1007429, whole genome shotgun sequence.
ACCESSION   DASWKS010000489 DASWKS010000000
VERSION     DASWKS010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1007429"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2479
                     /locus_tag="VGA78_13860"
     CDS             <1..2479
                     /locus_tag="VGA78_13860"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEX9895011.1"
                     /translation="LVALIALTRVLFLYFVQAKGWLDGRGAFLREELDRALRGNGSIQ
                     RDLLQPLFFGTLNQPLEHRGRTARRFGRVPFLNGGLFDVDPLERRWRPELGNDLWRDA
                     FDGLFERFAFTLGEDDGRHIAPDMLGRVFEGLMAPAQRSASGTFYTPARLVRALVRAT
                     LTAYLARHLRLDETEAEARLDHPDQSTRSLLDHVTILDPAVGSGAFLLGALELLAAAR
                     LEPPPSARRQVLARNLFGVDLNPAAVRLTELRLWLAVIEQDHTSEPGMVAPLPNLDSV
                     VRQGDSLLEPVIPGWQGGVPAAAAREQAALRSRLIVTSGREKAGLLRALRRTEAAIAE
                     GMLRGAEDVTQSRIGDLLEQSRSPTLFGGRRGLERAERKTLDALRGRRRFLLSLRRRL
                     ARDGSLPWFHYHSQFADVFARGGFDLVVGNPPWVRAEELPAPVRHHLRIRYRWWGGKR
                     AGRGYGHQPDLAVAFLERATELAALGGTIGFLVPAKLATASYGRVTRGVVAERMTIHA
                     IADLADDPRASFAATTYPLALIASKTAAPGEHRVRLRLEPGAAPELPQSRLKDGPWLL
                     AGDRLARALEQLRANHPHVGLRFQCHLGVKTGLNRVFVDPSEPVEPELLVWAVRGRDI
                     RPFTVCPEVRLLWTHAASGRPLTSLPPLAAAYLAKHRTALRSRRDYESGPEWTMFRTT
                     PAVSRHRVVWADLAARLEAAPLSGPQADRFVPLNSCYLMPVDDGASALRLSAWLNCTW
                     VGAAAAAVADPAANGFKRFNARVVAGLPLPERVLKDVTLLAAAEAARGGRPDQAALDD
                     HCARLLALDGDNCRVLADFAQAGRHRR"
     gene            2421..>4024
                     /locus_tag="VGA78_13865"
     CDS             2421..>4024
                     /locus_tag="VGA78_13865"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX9895012.1"
                     /translation="MATTAGSWRTSLKPAVIVAESLRRVPGPPLAAPPPVHGSPGEVA
                     SAIAHGLTPPLATDVPPEWLLPGQSVSFARALAAIRRHGAALIADPVGSGKTWIALAL
                     AKTLAGGAVAIVPAALRKQWERAARRTGVAVRVQTHEEWSRARRPIPEGLVVVDEAHW
                     YRHADTKRYAHLAPALVGRDGVLLTATPVVNRMEDVVNELLLLARDDALAGAGVASIR
                     EMLSHDRPPPQLAELIIAAAEMTGRPTERARQLGAAVEEEEQARAVFAQLDRLVLSTN
                     RAVRTLLAGVFAAAWGSSPAALRATLSRYRTLLLQERDAAGEGLCLGRQDLRRLLGGD
                     LAQTVLWPVIGDSHGSGDLVAGDLPALEELLAWLKELDPGTDPKIRRLNSVLGDGSKS
                     IVFTTARATVGHLRRVLAPTSRIAWCTGAEAGIGATRLSRADVLQWFGPEAPEHELAP
                     QTLVATDVAAEGLDLQRAGRIVHYDLPWTTVRLDQRAGRVVRLGSRHTTADVVTLLPP
                     AAVEARLNLLQRLARKRPLPSRLGLGR"
BASE COUNT          564 a         1379 c         1443 g          638 t
ORIGIN      
        1 cctggtcgcg ctgatcgcgc tcacccgggt gctgtttctc tatttcgtgc aggccaaggg
       61 ctggctggac ggacgcgggg ccttcctgcg ggaggagctc gaccgggcgt tacgaggcaa
      121 tggctccatt cagcgcgacc tgctgcagcc gctcttcttc ggcacgctga accagccgct
      181 cgagcatcgg ggcagaaccg cgcggcgctt cgggcgagtg ccgtttctca acggtggtct
      241 gttcgatgtc gatccgctgg aacggcgctg gcgcccggag ctgggcaacg acctgtggcg
      301 ggatgcgttt gatggactgt tcgagcggtt cgccttcacc ctgggggaag acgacggacg
      361 ccacatcgcc cccgacatgc tggggcgggt gttcgaaggc ctcatggctc ccgcgcaacg
      421 cagcgcatcg gggacgttct acacacccgc tcgcctggtg cgagccctgg tccgcgccac
      481 gctcaccgcc tacctggctc gtcacctccg cctcgatgaa accgaggccg aggcccggct
      541 ggaccatccc gaccaatcca cccgcagcct gctcgatcac gtgacgatcc tcgatccggc
      601 ggtcgggtcc ggcgccttcc tgctgggcgc gctcgagctg ctcgccgcgg cgcgactcga
      661 accgccgccg agcgcgcgac ggcaggtgct ggcgcgcaac ctgttcggcg tggatctgaa
      721 cccggccgcg gtgcggctca ctgagctccg gctctggctg gccgtgatcg agcaggatca
      781 taccagcgag ccaggcatgg tggcgccgct tcccaatctc gacagtgtgg ttcgccaggg
      841 tgacagcctg ctcgagccgg tcattcccgg atggcagggc ggggtacccg ctgcggccgc
      901 ccgagagcag gcggccctcc ggagtcggtt gatcgtcacc agcggccggg aaaaggccgg
      961 tctgctccgg gccctgcggc gcaccgaggc ggcgatcgcg gagggcatgc tccggggggc
     1021 agaagacgtc acccagtccc ggatcggcga cctgttggaa cagagccgct cgcccacgtt
     1081 gtttggcggg cggcggggac tggaacgggc ggagcgcaag acactggatg ccctgcgcgg
     1141 ccggcggcgt tttctgcttt ccctcaggcg ccgactggcg cgggacggat cgctgccctg
     1201 gtttcactat cacagccagt tcgccgacgt ctttgcccgc ggcggcttcg acctggtagt
     1261 cggcaatccg ccctgggtcc gggccgagga actgccggcg ccggtccgcc atcacctccg
     1321 gatccggtat cgctggtggg gcggcaagag agccggtcga gggtacgggc atcagcccga
     1381 tctcgcggtg gcgtttctgg aacgggccac cgagctggcg gcgttaggcg gcaccatcgg
     1441 gtttctggtt ccggccaagc tggcaaccgc atcgtacggg cgcgtgaccc ggggagtggt
     1501 cgcggagcgg atgacgatcc atgccatcgc ggatctggcc gacgatcccc gggcgtcttt
     1561 cgcggctacc acctaccccc tggccctcat cgccagcaag accgccgcac cgggagagca
     1621 ccgggtgcgg ttgcggctgg agccgggggc ggcgcccgag ctgccccagt cgcggctcaa
     1681 ggacgggccg tggcttctgg cgggcgaccg gttagcccgc gcgttggagc agctgcgagc
     1741 caatcaccct catgtgggtc tcaggtttca gtgtcacctg ggagtcaaga ccggactcaa
     1801 ccgggtgttc gtggatccgt ccgagccggt ggaaccagag ctcctggtgt gggcggtgcg
     1861 aggccgtgac atccggccgt tcacggtctg tcccgaggtc cggctgctgt ggacccacgc
     1921 cgcgagcggc cgtcccctga cctcgttgcc acccctcgcc gccgcctacc tcgccaagca
     1981 ccggaccgct ctgcggtcac gtcgcgacta cgagagcggt cccgagtgga ccatgttccg
     2041 gaccacgccg gcggtgtcac ggcatcgggt ggtgtgggcc gatctcgccg ctcgactcga
     2101 agcggctccg ctctccgggc cgcaggcaga ccgattcgtt ccactcaaca gctgctatct
     2161 catgccggtg gacgacggtg cctcggcact caggctctcg gcctggctca actgtacctg
     2221 ggtcggagct gccgcagccg cggtggccga tccggccgcc aacggattca agcggttcaa
     2281 tgcccgggtg gtggcaggcc tgccgttgcc ggagcgagtc ctcaaggatg tcaccctgct
     2341 ggcggccgcc gaagcggcgc gaggcggccg ccccgatcag gccgccctgg atgaccactg
     2401 cgcccgcctc cttgccctcg atggcgacaa ctgccgggtc ctggcggact tcgctcaagc
     2461 cggccgtcat cgtcgctgaa tcgctgcggc gggtgccagg cccgcccctg gcggcgccgc
     2521 ctccggttca cggatcgccc ggagaagtgg cctcggccat cgcccacggg ttgacgcccc
     2581 cgctggccac cgatgtgccg ccggagtggc tcctgccggg ccagtcggtc agcttcgccc
     2641 gggcgctggc ggcgattcgc cgtcatggag ccgccctgat cgccgacccg gtggggagcg
     2701 ggaagacctg gatcgccctg gcgctggcca agacactggc gggcggcgcg gttgcgatcg
     2761 ttccggccgc cctgaggaag caatgggaac gcgcggcgcg ccggaccggc gtggcggtga
     2821 gggttcaaac ccacgaagag tggagtcgcg cccgccgacc gatccccgag ggtctggtcg
     2881 tcgtcgatga agcgcactgg tatcgtcacg cggataccaa gcggtacgcc cacctggcac
     2941 cggccctggt tggccgtgac ggagtgctgc tgaccgccac accggtagtc aatcggatgg
     3001 aggatgtcgt caacgaactc ctgctgctgg cccgggacga cgcgctggcc ggggcggggg
     3061 ttgcatcgat tcgcgaaatg ctgagtcacg atcgcccgcc accccagcta gccgagctca
     3121 tcatcgccgc tgccgagatg accgggcgtc ccaccgagcg ggcccggcag ctcggcgccg
     3181 ctgtggagga ggaagagcag gcccgcgccg tcttcgcgca gctggaccgg ctggtattga
     3241 gcaccaaccg ggcggtgcgc acgctgctcg cgggcgtgtt cgccgccgca tggggatcga
     3301 gccccgccgc gttgcgggcg acgttgagcc gttatcggac cttgctcctc caggagcgcg
     3361 acgcggcggg cgagggcctg tgcctgggac gacaggatct gcgtcgattg ctgggcggcg
     3421 acctggcgca gacggtgctg tggccggtga tcggggacag ccacggcagt ggtgatctgg
     3481 tggcgggaga cctccccgcg ctggaagaat tgctggcctg gctcaaagag ctcgatccgg
     3541 gaaccgaccc caagatccgg cggctcaatt cggtgctggg cgacgggtcc aagtcgatag
     3601 tgttcaccac ggcgcgggcc acggtgggtc atctccgccg agtgctggcc ccgacgtcac
     3661 gaatcgcctg gtgcaccggc gccgaggcgg ggatcggtgc cactcggctt tcgcgcgccg
     3721 acgtgctgca atggttcggc ccggaagcgc cggagcacga gctcgcaccg caaaccctgg
     3781 tagccaccga cgtcgcggcg gaaggactgg atctgcagcg ggccggacgc atcgtgcact
     3841 atgacctgcc ctggaccacg gttcgtctgg accagcgggc cggaagggtg gtgcggctgg
     3901 gatcccgcca caccaccgcc gacgtggtga cgctgttgcc gccggcggcg gtggaagcgc
     3961 ggctgaacct gctgcagcga ctggcccgca agcgtccgtt accgtcacga ctggggctgg
     4021 gccg
//
LOCUS       DASWKS010000490         5169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_630717, whole genome shotgun sequence.
ACCESSION   DASWKS010000490 DASWKS010000000
VERSION     DASWKS010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_630717"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..911
                     /locus_tag="VGA78_13870"
     CDS             <1..911
                     /locus_tag="VGA78_13870"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HEX9895013.1"
                     /translation="APFLIAVGLGLLWWAVDRVGGLGSILRDSGALHGSRPGGTPSGF
                     LLGLFLPWVTAMVGFWATLALNIPDFTRYARSQRDQMIGQTVGLLATMPLFAFIGIVV
                     TGATVVLYGHAIWNPVELVGRLSAESGSSLLGLAALIVILVATLTTNIAANVVAPANS
                     IANLSPRRISSRVGGLIAALIGVLIFPWKLLDSYQTWLLSYSGLLGGVAGILVCDYLV
                     IRRRQLVVRDLYRVGGRYSYRQGVNRRAVGALAAGVLVALAGTLHPSLAFLFRGAWFS
                     ATAVSFVVYYLLMRAEPAPVTVSEEA"
     gene            911..1711
                     /locus_tag="VGA78_13875"
     CDS             911..1711
                     /locus_tag="VGA78_13875"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX9895014.1"
                     /translation="MRIYDLSQPLNQEVSFWPYYPPFEVKYIKRKAEHGVNAQYIQTS
                     NHMGTHLDAPRHFVTAGRTIDEIPVEWLCGPGAVVDLRDEMHDLGVYTPEMIERRVTV
                     KTGDLLILHTGWHRYAQFGAEPDEERYIHMHPGAHPDLVPWLLDKKIHIWGVDCVSTD
                     HPMNLPIGRFLGKGMHGQCDRVRARAEQLFGGKQGVEEMFPDSAYQLTHNALFPHDCM
                     HIENMGGSIDDAELQNRRCIVGCFPWKFKGGEAAFCRAVAWLGEWPIP"
     gene            1696..3129
                     /locus_tag="VGA78_13880"
     CDS             1696..3129
                     /locus_tag="VGA78_13880"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX9895015.1"
                     /translation="MADTIDGRTGGRADGQLFPSAFDVARSIRERSLSPVDALDAVLE
                     RVDRFNPSLNAIVTLNPRARDEAGALEQLIARGEDPGALAGVPVGIKDVTPVAGLRTT
                     YGSPLYRDHVPTEDALVVRRLRAAGAIVIGKTNTPEFAAGGNTWNEVFGRTRNPWNPE
                     RSAGGSTGGGAAALATGMIAIAEGTDLGGSLRIPASFCGVVGLRPSVGLVPTYPTDWA
                     WDTLQVTGPMARTAEDVALALQVMAGPTPLAPLGQPVEGRDFLAAVRAGPRAGLRVAY
                     CPAVAGIGLDPGVESVCRSAVQLMARSGIAVDEIELDLSAGREAFLSLRGLWFVTWMY
                     SRLDRIDGFGVNVRNNTRAGLEGRVLDLAAAEQVRGRIWHQLRQLLERYDHLLTPTMA
                     VAPFPVEENFPRTVAGRDMQTYVDWIAPTFVLSLTGLPVASVPCGLDREGMPVGMQIV
                     GPPRGEEAVLALAGLFQQIVPVGLPPL"
     gene            complement(3242..4726)
                     /locus_tag="VGA78_13885"
     CDS             complement(3242..4726)
                     /locus_tag="VGA78_13885"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX9895016.1"
                     /translation="MSAAITDRARLHGDRTAIISPGGRFSYLDLDQASARAAAWLLAG
                     GADLKEARVAFLVAPGFDHVVTQWAIWRAGGIAVPLALSHPPAELDYVIRDAEADIVI
                     ASLDRAELVAPLAISRGARFGTPEDFGGEGLAPLPVIPADRRAMMVYTSGTTGRPKGV
                     VTTHANLSAQLTSLISAWQWTADDRILLVLPLHHVHGIVNVLGCALWSGAACEMPPRF
                     DAEQTWARLASGELTLFMAVPTIYRRLIASWDQASPAVRRTRSAGYRSLRLMVSGSAA
                     LPVATLERWREISGHVLLERYGMTEIGMALSNPLVGERRPGFVGTPLPGVEVRLVDEQ
                     GATVPPGTAGEIEVRGPTVFLEYWRRPEATRDAFRDGWFRTGDMAVIEAGAYRILGRT
                     SIDIIKTGGYKVSALEIEELLRTHPSVAECAVVGVEDPEWGERVCVAVEIAPGQALSL
                     EALQRWAKQRLAPYKIPRSLSCVDSLPRNAMGKVMKPEVARWFS"
     gene            4853..>5169
                     /locus_tag="VGA78_13890"
     CDS             4853..>5169
                     /locus_tag="VGA78_13890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895017.1"
                     /translation="MTFRPRVAMVSLGLVCGLAGMTQAQTNRVHLGPRISYNFDLEDF
                     AIGAQLSIPIANRFEFYPSFDYYFVDPGSAWGMNADLKYRFAPESLRWLYVGAGLNFT
                     GVSV"
BASE COUNT          817 a         1704 c         1714 g          934 t
ORIGIN      
        1 cggcgccctt cctcatcgcg gtcggcctcg gcctgctctg gtgggccgtg gatcgggtcg
       61 gggggctggg gtcgattctg cgggattcgg gtgcgttgca tggctctcga cctggaggca
      121 ctccgagcgg attcctgctg ggtctgttcc tgccgtgggt gacggcgatg gtgggattct
      181 gggccacgct cgcgctcaac attccggact tcacccggta cgccaggagc cagcgggatc
      241 agatgatcgg ccagaccgtc ggtctcctcg ccaccatgcc actattcgcg ttcatcggga
      301 tcgtggtgac tggtgccacc gtggtcctgt atgggcacgc catctggaac ccggtggagc
      361 tggtcggccg cctgtcggct gagagcggct ccagcctcct cggcttggcg gcgctgattg
      421 taattctggt ggcgaccctc accaccaata tcgccgccaa cgtggtcgct cccgcgaaca
      481 gcatcgccaa cctgagcccg cgccggatca gctcccgggt gggcggtctg attgccgccc
      541 tgatcggcgt gctgattttc ccctggaagc tgctggactc ctatcaaacc tggctgctca
      601 gctattccgg cctgctgggt ggcgtggccg gcattctggt gtgcgactat ctcgtcattc
      661 gccggcggca gctggtcgtg cgggatctct accgggtcgg cggccggtat tcctatcgcc
      721 agggggtgaa ccgccgcgcc gtgggtgccc tggccgccgg ggtactggtg gcgctggccg
      781 ggacgctgca cccttcgctg gcgttcctgt tccgcggcgc ctggttttcg gcgacggccg
      841 tgtccttcgt tgtctactat ctgctcatgc gcgccgagcc ggcgccggtg acggtatctg
      901 aggaggcata atgcggatct acgacctctc gcagccactc aaccaggagg tgtcgttctg
      961 gccctattac ccacccttcg aggtgaagta catcaagcgc aaggcggagc acggcgtgaa
     1021 cgcgcagtac atccagacct cgaaccacat ggggacccat ctcgacgcgc cccggcactt
     1081 cgtcactgcg ggccgcacca tcgacgagat tccggtcgag tggttgtgcg ggcccggcgc
     1141 ggtggtggat ttgcgcgatg agatgcacga cctcggggtc tacaccccgg aaatgatcga
     1201 gcgtcgggtc acggtgaaga ccggcgatct gctgatactc cacaccgggt ggcatcgcta
     1261 tgcccagttc ggcgccgagc cggacgagga gcgctacatc catatgcacc cgggcgccca
     1321 ccctgacctg gtcccctggc tgctcgacaa aaagatccac atctggggcg tcgattgcgt
     1381 ctcgaccgat cacccgatga accttcccat cgggcgcttc ctcggaaagg gaatgcacgg
     1441 ccagtgcgat cgggtgcggg cgagggccga acagcttttc ggcggcaagc agggcgtgga
     1501 ggagatgttc cccgattccg cctaccagct cacccacaac gctctctttc cccacgactg
     1561 catgcacatc gagaacatgg gagggtccat cgacgacgcc gagctgcaga accggcgctg
     1621 catcgtgggt tgtttcccgt ggaagttcaa aggcggggaa gcggcgttct gccgggccgt
     1681 ggcttggctg ggtgaatggc cgataccata gacggacgga cgggcgggcg ggcggacgga
     1741 cagctgttcc cttcggcctt cgatgttgcc cgctcgattc gggagcgctc cctgtctccg
     1801 gtcgacgcgc tcgacgcggt tctggagcga gtcgaccggt tcaatcccag cctcaacgcc
     1861 attgtcacgc tgaatccacg ggcgcgcgat gaagccggcg cgctggagca gctgatcgcc
     1921 cggggcgaag accccggcgc gctggccggc gttccggtgg gcatcaagga cgtgactccg
     1981 gtcgcagggt tgcgcacgac ctatggctca cccctctacc gtgatcacgt tcccaccgag
     2041 gatgccctcg tggtacggcg gcttcgcgcc gccggggcca tcgtgatcgg caagaccaac
     2101 acccccgagt ttgccgcggg gggcaacacc tggaacgagg tattcggacg cacccgtaat
     2161 ccctggaacc cggagcggag tgctggcgga tcaacgggcg gtggtgccgc cgcgctggcg
     2221 accgggatga ttgcgatcgc cgagggcacc gatctgggag ggtcgctccg gattcccgcg
     2281 tccttctgcg gcgtggtcgg cttgcgacct tcggttgggc tggtaccgac ctacccgacc
     2341 gattgggcct gggacaccct gcaagtcacc ggtccaatgg cgcgaacggc cgaggacgtg
     2401 gctttggcgt tgcaggtgat ggcggggccg acgccgctgg cgccgctggg tcagccggtc
     2461 gagggacgcg attttctcgc cgcggtccgc gccggaccgc gggcgggcct tcgagtcgcc
     2521 tattgcccgg ccgttgccgg catcggcctc gatcccgggg tggagtcggt ctgccggtcc
     2581 gcggtccagc tgatggcgcg gtccgggatc gcggtggatg aaatcgaact cgacctctcg
     2641 gccggacggg aggcttttct ctcgctgaga gggctctggt tcgtcacttg gatgtactcg
     2701 cggctggacc ggatcgacgg cttcggcgtg aacgtacgga acaacaccag agccgggctc
     2761 gaaggccggg tgctggacct cgcggccgcc gagcaggtcc ggggtaggat ctggcaccag
     2821 cttcggcagc tactcgagcg gtacgaccac ctgctgaccc cgaccatggc agtggcgcca
     2881 ttcccggtgg aggagaattt cccacggacg gtggcggggc gggatatgca gacctacgtc
     2941 gattggatcg ctcccacctt tgtgttgagt ctcaccgggc tgccggtcgc gtcggtgcca
     3001 tgcggactgg accgtgaagg gatgccggtc ggaatgcaga tcgtcggccc gcctcgggga
     3061 gaggaggccg tcctggcgct ggccggattg ttccagcaga tagtcccggt cggactcccg
     3121 ccactctagg gccatttctc ccggacatca aggatcgaaa acttcctgga tcctcgctct
     3181 gcagccaaac aggtgcagcg cgcgggcgca cccgctcttg gggaaaccag ttggaactgc
     3241 attagctgaa ccatctcgcg acctcaggct tcatcacttt ccccatggcg tttcgcggca
     3301 gcgagtccac gcacgaaagg ctcctgggga ttttgtaggg agccagccgc tgcttcgccc
     3361 accgctggag tgcctcgagc gatagcgcct gcccgggtgc gatttcgacc gccacgcaga
     3421 ctcgctcgcc ccattcggga tcctctacgc cgaccacggc gcattctgcc acggacggat
     3481 gggtgcgcag tagctcctca atctcgagcg ccgagacttt gtagcctccg gtcttgatga
     3541 tgtcgatgct ggtacgtccc aggatccggt aggctcccgc ttcgatgacg gccatgtccc
     3601 cggtgcggaa ccacccatcc cggaacgcgt cgcgagtggc ttcgggccga cgccagtatt
     3661 ccagaaacac ggtcggtccc cgcacttcga tctctcccgc cgtgcccgga ggtactgtcg
     3721 cgccctgctc gtcgaccagt cggacctcca cccccggcaa cggcgtcccg acgaagccgg
     3781 gacggcgttc acccaccagc ggattggaga gggccatacc gatctcggtc atgccgtaac
     3841 gctccagcag cacgtggccg ctgatttccc gccaccgttc cagcgtggct acggggagcg
     3901 cggcggagcc ggacaccatg agccgcaaag aacggtaccc ggcgctcctc gtccggcgaa
     3961 cggccgggct cgcctggtcc caggacgcga tgagccggcg gtagatggtg gggaccgcca
     4021 tgaagagcgt cagctcgccc gaggccagcc gggcccaggt ctgctcggca tcgaaccgcg
     4081 gcggcatctc acacgcggca ccgctccaga gggcgcagcc caacacgttc acgatcccgt
     4141 ggacgtgatg cagcggcagg accagcagaa tccgatcgtc cgccgtccac tgccacgcgg
     4201 agatgagtga ggtcagctgg gccgacaggt tggcgtgggt cgtgaccacg cctttgggcc
     4261 ggccggtcgt tccgctggtg tagaccatca tggcccggcg atcagccgga atcaccggaa
     4321 gcggcgccag cccctcccca ccgaaatcct cgggcgtccc aaaccgagcc cccctggaga
     4381 tcgccagcgg cgccaccagc tcggcccgat ccagcgaggc gatcacgatg tcggcttcgg
     4441 catcccggat cacgtagtcc agttccgccg gcggatgcga cagggccagg ggaacagcga
     4501 tcccccctgc gcgccagata gcccactggg tcacgacgtg gtcgaacccg ggtgcaacca
     4561 ggaaggcgac cctggcctcc ttcagatccg cgccgcccgc cagcagccag gcagcggccc
     4621 gggccgaggc ctggtccagg tcgagatagg agaatcgacc cccgggcgat atgatcgcgg
     4681 ttctgtcccc gtgaagccgg gcccgatcgg tgatagctgc tgacaattgg tgcagtaggg
     4741 aaggggttga gagcgaatct aatccgccga tgtgtgggcg gcgacatgtt cccgcgtccc
     4801 ttcctcaact cccgccccaa ccgcggggga tttcctcaac ggaggaccat gcatgacgtt
     4861 ccgaccgcgg gttgcgatgg tgtcgctcgg gctggtctgc gggctggcag gaatgaccca
     4921 ggcccagacc aatcgggtgc atctggggcc acgtatctcg tacaacttcg atctggaaga
     4981 ttttgcgatc ggcgcgcaac tctcgatccc gatcgccaat cgattcgaat tctatccttc
     5041 cttcgactat tactttgtcg atcccggctc cgcctggggt atgaacgcgg atctcaaata
     5101 ccggttcgct cccgagagcc tccggtggct ctatgtcggt gccggtctga acttcaccgg
     5161 ggtcagcgt
//
LOCUS       DASWKS010000491         2932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2130817, whole genome shotgun sequence.
ACCESSION   DASWKS010000491 DASWKS010000000
VERSION     DASWKS010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2130817"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..947)
                     /locus_tag="VGA78_13895"
     CDS             complement(<1..947)
                     /locus_tag="VGA78_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895018.1"
                     /translation="MHKTHPESRRTNPENVMRRSPGCRLLLCVLLVPGSLAGQATDYD
                     LVIRNGRVLDGGGNPWIRADVAIQGGRIVRVGRVTGRGTREIDAAGKYVSPGWIDMMD
                     QSAPLLARQGLAENKVRMGVTTALSGEGGTPVPASQAAEWFAGLERTGISVNFGTYYS
                     ATATRRAVLGSQDRAPTPPELDRMRAMVDTAMRAGVLGITTALIYPPSSYHRTDELVE
                     LAKVSAKYGGFYASHIRGEGRELLEAIGEAITIGEQSGAPVEVYHLKAAYQPGWGTLM
                     KQAGALVDSARARGVDVAADMYPYTAGGTGLEATIPSWA"
     gene            complement(1014..1175)
                     /locus_tag="VGA78_13900"
     CDS             complement(1014..1175)
                     /locus_tag="VGA78_13900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895019.1"
                     /translation="MSTRVEVTRAGIGFGSALAITISWTANKSLFWAIVHGLLSWIYV
                     VYYALRYHF"
     gene            complement(1172..1444)
                     /locus_tag="VGA78_13905"
     CDS             complement(1172..1444)
                     /locus_tag="VGA78_13905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895020.1"
                     /translation="MDKQVVALLIPILALSIPVVAVIFNGLLKIQKMKLEEARLRHTA
                     EPALLAEVDELRQDLQQVRGELTEVQERLDFTERLLTSRTPEGPAR"
     gene            complement(1488..2228)
                     /locus_tag="VGA78_13910"
     CDS             complement(1488..2228)
                     /locus_tag="VGA78_13910"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEX9895021.1"
                     /translation="MAETPTSRTPLYVALIGAIGLVLAGAAIGRGFSDARLAERYVSV
                     KGVSEREAKANLALWPIPLVAANDDLALAQTQVARSTERIKAFLVQHGLDTSQAQLQA
                     LRVTDRQANPYQAGEAGRRFIIRQTLILRSTEPDKVLAASQRVGELVQAGVVLSSGEE
                     YGPGGPTFLFTNLNEIKPAMIAEATSRAREAAEQFARDAGSRLGGIRQANQGVFVILP
                     RDQAPGVTEESQLFKMVRVVSTVDYYLR"
     gene            complement(2253..>2932)
                     /locus_tag="VGA78_13915"
     CDS             complement(2253..>2932)
                     /locus_tag="VGA78_13915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895022.1"
                     /translation="RIQGYARSTLRDGVRQLTEFFVRPGSQSAGLGRELLQRAFPADS
                     SRARILLATPDTRALVRYLKTGLSARFPVFHFHRSRRTLSHPAELRVHRLTDSPNDVE
                     QLAAIDREILGFSRDPDHRWLLSQREGYLYHLGDRLAGYGYVGRYSGPFATLDPALIG
                     PILTHAESASPEEEFGMEVPLINRAALDYLLGAGYRMDDFVNYFASDVAIGDLERYLV
                     TTPSFFL"
BASE COUNT          502 a          988 c          963 g          479 t
ORIGIN      
        1 aatgcccacg aggggatggt ggcctcgagc ccggtgccgc ccgcggtgta gggatacatg
       61 tcggccgcca cgtccacccc gcgggcccgg gctgaatcga ccagggcgcc ggcctgcttc
      121 atcagggtac cccagcccgg ctggtacgcg gccttgaggt gatagacctc aaccggtgcg
      181 ccgctctgct cgccgatggt gatggcctcg ccgatggctt cgagcagctc cctcccctca
      241 ccccggatat gactggcgta gaagccgccg tacttggccg ataccttcgc cagctcgacc
      301 agctcatcgg tgcgatgata gctgctgggc gggtagatca aggcggtggt gatgcccagg
      361 acgccggccc gcatcgcggt gtcgaccatg gcccgcatcc gatccagctc cggcggggtc
      421 ggcgcccggt cctgactccc gaggacggcg cgacgggtgg ccgtcgcact gtagtaggta
      481 ccgaagttga cgctgatccc ggtccgctcc agcccggcaa accactcggc ggcctgcgag
      541 gcggggaccg gcgtgccccc ttcgcccgac aacgcggtcg tgactcccat gcggaccttg
      601 ttctcggcca gtccctggcg ggccaggagg ggtgccgact ggtccatcat gtcgatccac
      661 ccgggtgaca cgtacttgcc ggccgcatcg atctcgcggg tgcctcggcc ggtgacccgt
      721 ccgacccgga cgatccggcc gccctggatg gcgacatcgg cccgaatcca cggattcccg
      781 ccgccgtcga ggactcggcc gttccggatg accaggtcgt agtcggtggc ctgacccgcg
      841 agggagccgg ggaccagaag aacacacagc agcaggcggc agccaggaga tcgacgcatg
      901 acgttctcgg gattggtgcg gcgcgactcg ggatgggtct tgtgcatccg caattgtatc
      961 caaaaatcaa cgcccgggaa agcgcgcgag gggcgcgccg aaccccggtg ggatcagaag
     1021 tggtaccgca gggcgtagta gaccacgtag atccaactga gcaatccgtg cacgatcgcc
     1081 cagaacaggg acttgttggc ggtccacgag atggtgatcg cgagcgcgga accgaagccg
     1141 ataccggctc gggtgacttc aaccctggtg ctcatcgagc cggaccctcc ggggtgcggg
     1201 aagtcagcag gcgttcggtg aagtcgagcc gttcttgtac ttcggtcagc tcaccccgta
     1261 cctgctgcag gtcctgccgc agctcgtcca cttcggccag caaggccggc tccgcggtgt
     1321 gcctgagccg cgcctcctcc agcttcatct tctggatctt gagcagcccg ttgaagatca
     1381 ccgccacgac cgggatggag agcgccagga tcggtatgag cagtgccacc acttgcttat
     1441 ccatcgcccc tccttgtccg tcggtccgtc ggtccgtcgg tccgtcgcta ccgcaggtag
     1501 taatccaccg tcgagaccac gcgcaccatc ttgaacagct ggctctcttc cgtgacgccg
     1561 ggggcctggt cccgcgggag aatcacgaac acgccctgat tggcctgccg gatgccgccc
     1621 agccggctgc ccgcatcccg ggcgaactgc tccgccgctt cgcgggcgcg cgaggtggct
     1681 tcggcgatca tggcgggctt gatctcattg aggttggtga agagaaaggt cggcccgccg
     1741 ggtccatact cttctccgga ggacagcacc acgccggctt gcaccagctc ccccacccgc
     1801 tggctcgcgg ccagcacctt gtcgggctcg gtggatcgga ggatcagcgt ctggcgaatg
     1861 atgaagcgtc ggccggcctc tccggcctga tagggattgg cctggcgatc ggtcacccgg
     1921 agtgcctgga gctgggcctg ggacgtgtcc agcccgtgct ggaccaggaa ggccttgatc
     1981 cgttccgtgc tgcgcgccac ctgggtctgg gccagcgcca gatcatcgtt ggcggcgacc
     2041 agagggatag gccagagcgc caggttggcc ttcgcttccc gctccgaaac ccctttgacg
     2101 ctcacgtatc gctccgccag ccgcgcgtcg gagaaacctc gcccgatggc agccccggcc
     2161 aataccaggc cgatggcgcc gatcagcgcc acgtacaacg gggtgcgact ggttggagtt
     2221 tcagccacga ccggctccgg atgctcgccc gctcacagga aaaacgaagg cgtcgtcacg
     2281 aggtaccgtt ccagatcgcc gatggcaaca tcgctcgcga agtaattcac gaagtcgtcc
     2341 atgcgatacc ccgcgcccag aagatagtcc agcgccgccc ggttgatcag cggaacttcc
     2401 atcccgaatt cctcctccgg ggaggcactc tccgcgtggg tgaggatcgg accgatcaat
     2461 gccgggtcga gggtcgcaaa cggccccgaa taccggccta cgtatccgta gcccgccagc
     2521 cggtcgccca ggtggtacag gtagccctcg cgctgactca acagccagcg atgatccggg
     2581 tcgcggctga accccaggat ctcccgatcg atggcggcca gctgttcgac gtcattcggg
     2641 gaatcggtca gccggtgcac ccgcaattcc gccggatgag acagggtccg gcgcgaccgg
     2701 tgaaaatgaa agaccggaaa gcgggccgaa aggcccgtct tgagatagcg aaccagcgcg
     2761 cgagtgtcag gggtagccag gaggatacgg gcccgcgagg agtcagccgg aaaggcacgc
     2821 tgcagcagct cccgtcccag ccctgccgat tgggaaccgg gccggacgaa aaactcggtg
     2881 agctgtctta ccccgtcccg cagggtcgag cgggcatagc cctggattcg cc
//
LOCUS       DASWKS010000492         1620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2131329, whole genome shotgun sequence.
ACCESSION   DASWKS010000492 DASWKS010000000
VERSION     DASWKS010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2131329"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1620)
                     /locus_tag="VGA78_13920"
     CDS             complement(<1..>1620)
                     /locus_tag="VGA78_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX9895023.1"
                     /translation="VDYSGRSVIVVGPELRLHQCGLPKAMAVELFKPFIIHKLVEKGI
                     AETVKRAKKIVERESPEVYEILEEIIQDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIR
                     IHPLVCAAFNADFDGDQMAVHVPLSFEAQLEARLLMISSNNVLKPSDGRPVAEPSQDM
                     VLGSYFLTKLPPGFEEELRRAGAGKSEDARARLWKTSKFFGSLAEIEMALLNGSVGYH
                     SAIHFWYIPPAETADEEARRPRWLRTTVGRVLFNSILPRRVVAELGFRDDLMKKKNLS
                     ELVLQSYRRAGLADTVTFLDRLKDFGFRFATMGGVSIGVEDLEIPAEKAELLSEADAR
                     VKRFQRAYNTGQITFGERYNKVIDAWTHANNDVAEAMINSMRVSRGGFNPVFMMFDSG
                     SRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIKSNFREGLTVLEYFISTHGAR
                     KGLADTALKTADAGYLTRRLVDVAQDGVITAYDCGTVDGIEMTALVEAGEIIETLGDR
                     VLGRVALEDIIDPFRNTVLLQAGGEIDEDKDA"
BASE COUNT          242 a          586 c          509 g          283 t
ORIGIN      
        1 cgcgtccttg tcctcgtcga tctcgccgcc ggcctgcagc agcaccgtgt tgcggaacgg
       61 atcgatgatg tcttccagcg ccacgcggcc cagcacgcgg tcaccgagcg tctcgatgat
      121 ctcgcccgct tccaccagcg cggtcatctc gatgccgtcc accgtgccgc agtcgtaggc
      181 ggtgatgacg ccgtcctgcg ccacgtccac caagcggcgg gtgaggtacc ccgcatcggc
      241 ggtcttgagc gccgtgtccg ccagaccctt ccgggcgccg tgggtcgaga tgaagtactc
      301 gagcacggtg agcccctcac ggaagtttga cttgatcggg ctctcgatga tctcgccgat
      361 gccgccggtc agcttcttct gcggtttggc catcaggccg cgcatgccgg cgagctgccg
      421 gatctggtcc cggctgccgc gtgacccgga gtcgaacatc atgaacaccg gattgaaccc
      481 gccgcgggag acccgcatcg agttgatcat cgcctcggcc acgtcgttgt tggcgtgggt
      541 ccaggcgtcg atcaccttgt tgtaccgctc gccgaaggtg atctggccgg tgttgtaggc
      601 ccgctggaac cgcttgaccc gggcgtccgc ctcggagagc agctcggcct tctcggccgg
      661 gatctccagg tcctcgacgc cgatggacac gccacccatc gtggcgaagc ggaacccgaa
      721 gtccttgagc cggtcgagga aggtgaccgt atcggccagc cccgcacgcc ggtagctctg
      781 gagcaccagc tccgagaggt tcttcttctt catcaggtcg tcgcggaagc cgagctccgc
      841 caccacccgc cgcggcagga tgctgttgaa cagcacccgg cccaccgtgg tgcgcagcca
      901 gcggggccgg cgcgcctcct cgtcggcggt ctccgccggc gggatgtacc agaagtggat
      961 cgcggagtgg tagcccacgc tcccgttgag cagcgccatc tcgatctcgg ccaggctccc
     1021 gaagaacttc gacgtcttcc acagccgcgc cctggcgtcc tcgctcttcc ccgccccggc
     1081 ccgccggagc tcctcctcga agcccggcgg cagcttggtc aggaagtagc tgcccagcac
     1141 catgtcctgc gacggctcgg ccaccggacg gccgtccgac ggcttgagca cgttgttcga
     1201 cgagatcatc agcagccgcg cctccagctg cgcctcgaac gacagcggca cgtgcaccgc
     1261 catctggtcg ccgtcgaagt cggcgttgaa cgccgcgcag accagcgggt ggatccggat
     1321 ggccttgccc tcgaccagca ccggctcgaa cgcctggatg cccagccggt ggagcgtcgg
     1381 cgcccggttc agcagcaccg ggtgatcctg gatgatctct tccaggatct cgtacacctc
     1441 cgggctctcg cgctccacga tcttcttggc gcgcttgacc gtctcggcga tgcccttctc
     1501 caccagcttg tggatgatga acggcttgaa cagctccacc gccatcgcct tgggcaggcc
     1561 gcactggtgc agccggagct ccgggcccac cacgatgacc gaccggccgg aatagtccac
//
LOCUS       DASWKS010000493         4580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_631185, whole genome shotgun sequence.
ACCESSION   DASWKS010000493 DASWKS010000000
VERSION     DASWKS010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4580
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631185"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..485
                     /locus_tag="VGA78_13925"
     CDS             93..485
                     /locus_tag="VGA78_13925"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9895024.1"
                     /translation="MRNRRGFTLIELLIVVVIIGILSAIAIPKFELTKEKAVLAQMKG
                     DLRNLVTSQEAFSADNQAYYNGPLPSAALTYNQSVGVTIVLSNVTLTGWGAVASAAPK
                     TTWTCGVFIGTGGPAGPATVEGLITCAP"
     gene            686..1141
                     /locus_tag="VGA78_13930"
     CDS             686..1141
                     /locus_tag="VGA78_13930"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HEX9895025.1"
                     /translation="MPNLPKRLRPNSGFSLVEMLIAIVVAGLLMAIALPKVRETVIRS
                     EVRSARSAVASMYARARIHALQTRKSTVVNFNATKAWVTTTDGGGGLDTVGAVLNLTN
                     AYGVAVAYTAPLIKFQPTGLTNVGAPVTVRVTRAGKADSVVISGYGRLQ"
     gene            1138..1521
                     /locus_tag="VGA78_13935"
     CDS             1138..1521
                     /locus_tag="VGA78_13935"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9895026.1"
                     /translation="MSAHRSGFTVVEMLIAITMLGIGLMALAAGSGSVTRTLNGSRIA
                     TQASQLAAWRMDMLRAYGRSTVPACIHAQFTNSAGAQTMYKVSQTWTIVPNGELRTVN
                     VFSTYAVSAGRARTDTLSTTVDCSI"
     gene            1524..2456
                     /locus_tag="VGA78_13940"
     CDS             1524..2456
                     /locus_tag="VGA78_13940"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9895027.1"
                     /translation="MRGRRGFTLVEIMVVMVMMLLVGAALTRILVNSMRVSRAQMITA
                     DMQSNVRVGGLAVPLELREIGYDSNISELAGPGAVRSDIEAIGTNFIQFRASRGFSTL
                     CGAWSLPNGGEGTLRIRKPVLGIREPLPSDSFQVFVENTPTISSDDQWLDAKITAIDL
                     NGICGAGGDPAIILTVSAEGISTKFDGTDDVVDANLSYGSPVRWFERMRFGSFVDADG
                     LTYLGARSISAGEGAYRAVAGPMDPITGFMLTYYNKNGVPVAPGVGNPVDVRTIEVQL
                     LGRTGSQVALAGTRMANRTMITTTRVALRNTLRH"
     gene            2480..3682
                     /locus_tag="VGA78_13945"
     CDS             2480..3682
                     /locus_tag="VGA78_13945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895028.1"
                     /translation="MPVSRLRDERGMALVMAVLALVVMGALVAGSFFVSRVEQVSGYN
                     TVWATEASESAEAGIAWAMSNLEADDYGALPVYEPGAPGEIEFTGTVQNMAGRVWTDS
                     IRRLNNELFLVRSTGQRLAGGNRVMATHTVAQLVRLVRPTFSVNAAITVQDPIQFNGN
                     ALDVSGYNAKPEGWAEADCPVGYPAPGNSDDLVGIRSSGETGASGADLKHVAGFPTKQ
                     VTYDPTVTSATFQNFLDFTFNNLTSQPNVKTLDLVTPYNGVQPVLDGAGACDKTQPLN
                     FGEPWRGVGSVAACQTFYPTVHGTGAETQFAAGNRGQGILLVEGDLVLVGGFEWAGLI
                     LVRGQMKITGTGNKITGAVLTEGVNIDEAGTIGGNAEINYSRCAIENAMNGAAVPAPV
                     SRGWSQIY"
     gene            3815..4177
                     /locus_tag="VGA78_13950"
     CDS             3815..4177
                     /locus_tag="VGA78_13950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895029.1"
                     /translation="MRGRSGHSLVEVLVAGLVLLAGVVPVAAGLGYSIRLGTRGRARA
                     EAALAALARLDQLRAAAAGSSPRCASLASGSESFPDRLESWTIGTDGDTRIVSVIVTV
                     PLPGGPVSDTAMVRLRCT"
     gene            4168..>4580
                     /locus_tag="VGA78_13955"
     CDS             4168..>4580
                     /locus_tag="VGA78_13955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895030.1"
                     /translation="MHLTRRGFALAEALVAVILTTLLLVAALGSLTALQRALGRQVAR
                     TTRAQTLRAAVQLGVAELQDLAPPAGDLVALSANGLIYRAVRATGLACGRGAEGLQVR
                     SSSFRALRTPSPGRDSVAVLVRPDAWVVVGLEADPR"
BASE COUNT          780 a         1464 c         1512 g          824 t
ORIGIN      
        1 ctcgtaatgt gaggcggggt ggaggccggg acggcaggcg ccgtcccggt ttccgcatca
       61 cccactaacc acggacccag acgaaaccgg atatgcgaaa ccgccgaggc tttaccctga
      121 tcgagctcct gatcgtggtt gtgatcatcg ggatcctctc ggccatcgct atcccgaagt
      181 tcgagctcac gaaggagaag gccgtgctgg cgcagatgaa gggcgacctg cggaacctgg
      241 tcacctccca ggaggccttc agcgcggaca accaggcgta ctacaacggt ccgctgccct
      301 cggcggcgct tacctacaac cagtcggtcg gggtaaccat cgtcctctcc aatgtcacgc
      361 tgaccggctg gggtgcggtc gcctcggccg ctccgaagac cacctggacc tgcggagtgt
      421 tcattggcac cggtgggccg gccggaccgg ccacagtcga aggcctgatc acctgcgcgc
      481 cgtaggcggc tgtcgaagaa cgagccaggg tcgttgtggt tacgcagcag tagtatgttg
      541 cggagaaaag aattatgatg ggaaagtaga cgcttcttca ctgtctactt ttctggcaat
      601 ctcactacgc agctttgtgc gatcccgact tagggggcca aacctctggg gggcgtagaa
      661 cttgcttcca ttcccggttg ataccatgcc caatctaccg aagcggctcc ggcccaactc
      721 aggcttctcc ctggtggaga tgttgatcgc gatcgtcgtg gcggggctgc tcatggccat
      781 cgcgctgccg aaagtccgtg aaaccgtgat ccggagcgag gtgcggtcgg cccgctcggc
      841 tgtcgccagc atgtatgccc gagcgcggat ccacgcgctg cagacccgca agtcgaccgt
      901 cgtgaacttc aacgcgacca aggcctgggt caccacgacg gacgggggcg gcggactcga
      961 taccgtgggg gcggtgctga acctcacgaa tgcctacggc gtcgcggtcg cgtacaccgc
     1021 acccctgatc aaattccagc ccaccgggct caccaatgtg ggcgcaccgg tcacggtccg
     1081 agttacgcgg gcgggcaagg ccgacagcgt ggtgatctcc ggctacggga ggcttcaatg
     1141 agtgctcatc gatccggctt taccgtggtc gagatgctga tagcgatcac gatgctcggc
     1201 atcggcctga tggcgctggc tgccggttcc ggctccgtca cccggaccct gaatggcagc
     1261 cggatcgcca cccaggcatc ccagctcgcc gcctggcgga tggacatgct gcgggcctac
     1321 ggccgctcta cggttccggc ctgtatccac gcccagttca ccaactcggc cggagcccag
     1381 accatgtaca aagtgagcca gacctggacc atcgtcccca acggggagct caggaccgtg
     1441 aatgtcttca gtacctacgc cgtcagtgct gggcgagccc gcaccgacac tctcagcacc
     1501 accgtcgact gcagcatctg actatgcgcg gacgccgagg atttaccctg gtcgagatca
     1561 tggtggtgat ggtgatgatg ctcctggtcg gagccgccct cacccgcatc ctggtcaatt
     1621 cgatgcgggt ctcgcgagcc cagatgatca ccgcggacat gcagtccaac gtacgtgttg
     1681 gcggcctggc ggtcccattg gagctgcgtg aaatcggcta cgactcgaat atcagcgaac
     1741 tggcagggcc gggagcggtg cgatcagaca tcgaggcgat cgggaccaat ttcattcagt
     1801 tccgcgccag ccgcgggttc tccaccctct gtggcgcgtg gagccttccc aacgggggcg
     1861 aagggaccct tcgtatccgc aagccggtgc tagggattag ggagcccttg ccgagcgata
     1921 gtttccaggt ctttgtcgag aacactccca cgatatccag cgacgatcag tggctcgacg
     1981 ccaagatcac cgccatcgat ctcaacggga tctgtggggc cggcggcgac ccggccatca
     2041 tactgaccgt ttcggccgag gggatctcta ccaagtttga cggcaccgat gacgtggtcg
     2101 acgcgaactt gtcctacggc tccccggtcc gctggtttga gcggatgagg tttggcagct
     2161 tcgtcgacgc cgacggactt acctatctgg gtgccaggtc catctcagct ggtgaagggg
     2221 cctatcgggc ggtggcgggt ccgatggatc caataaccgg gttcatgctc acctattaca
     2281 acaagaacgg cgtgccagtc gccccggggg tgggtaaccc ggtcgatgtg cgcaccatcg
     2341 aggttcagct gttagggcgg accggctccc aggtcgcctt ggccgggacc cgaatggcca
     2401 accgcactat gatcaccaca actcgtgttg ctctgcgcaa cacgctgaga cattgatgaa
     2461 ttctgcatcg gaggcatgga tgccagtttc gcggttgcgt gatgagcgcg gcatggccct
     2521 ggtcatggcg gtgttagccc tggtcgtcat gggcgcgctg gtcgccggct cgttcttcgt
     2581 gagccgggtg gagcaggtaa gcggctataa caccgtctgg gccaccgagg catccgaaag
     2641 cgccgaggcc gggattgcgt gggcgatgtc caatttggag gccgacgatt acggggctct
     2701 cccggtgtat gagccgggtg caccgggtga aatcgagttt accggaactg tgcagaacat
     2761 ggccggccgg gtgtggaccg attcgatccg acggctcaac aacgagctct tcctggtgcg
     2821 ttccaccggc caaaggctgg cgggcggtaa tagggtcatg gccacgcata cggtcgccca
     2881 gttggtccgt ctggtgcggc cgaccttcag cgtcaacgcg gccataacgg tgcaggaccc
     2941 gatccagttc aacgggaacg cgctcgatgt ctctggatac aacgccaagc cagagggctg
     3001 ggctgaggcc gattgcccgg ttgggtaccc ggccccggga aactcagatg acctggttgg
     3061 gatccggagc tccggcgaaa ccggggcaag cggcgcggat ctcaagcacg tggccggctt
     3121 cccgaccaag caggtcacct acgatccgac agtcacctcg gcgaccttcc agaacttcct
     3181 ggacttcacg ttcaacaacc tgacttcgca gccgaatgtg aaaaccctgg atctggtgac
     3241 accctacaac ggcgtgcagc ctgtgctcga cggggccggt gcctgcgaca agacccaacc
     3301 gttgaatttc ggtgaaccct ggcggggcgt tggctccgtc gcggcttgcc agacgttcta
     3361 cccgacagtg catggcaccg gggccgaaac ccagttcgcc gccggcaacc ggggtcaggg
     3421 cattctgctg gtcgagggcg acctggtgct ggtgggtggc ttcgagtggg ccggattgat
     3481 cctggtgcgc ggccaaatga aaatcacggg caccggtaac aagattaccg gggcggtcct
     3541 caccgaaggc gtgaatatcg atgaagccgg caccatcggt ggtaacgcgg agatcaacta
     3601 ctctcgctgt gccatcgaaa acgcgatgaa tggcgcggct gtgccggccc cggtcagccg
     3661 gggctggagc cagatatact gagtcaccgg gtcgcacgat cgtagactcg agaagggcgg
     3721 gccggtggcc cgcccttctt gcttgcgctg gttgagcccc ggattgcgtg gttccgatga
     3781 cgccggaccg cgattgggcc ggcagattgt ccccatgcgc ggccggtccg gtcattctct
     3841 ggtcgaggtc ctggtagcgg gcctggtgct cctggccggt gtggtcccgg tcgcggcggg
     3901 gctcggctac agcatccgcc tgggaacccg cggccgggcc cgcgccgagg ccgcgctcgc
     3961 cgccctggcc cggctggacc agctccgggc cgcagccgcg ggcagctcac cccgttgtgc
     4021 ctcgctggcg agcgggtcgg agagcttccc cgaccggctc gagtcctgga ccatcgggac
     4081 cgatggcgac acccggatcg tctcggtcat cgtcaccgtc cccttgccgg gcgggcccgt
     4141 ctcggacacc gccatggtgc gactgcgatg cacctgaccc ggcgggggtt cgcgctggcg
     4201 gaggcgctcg tggccgtgat cctcaccacc ctgctcctgg tagcggcttt aggcagcctc
     4261 accgcgttgc agcgcgcgct cggccgccag gtggcccgga ccacccgagc ccagaccctc
     4321 cgagcggcgg tccagctcgg cgtcgcagag ctgcaggatc tggcaccgcc ggccggcgac
     4381 ctggtggccc tgtccgccaa tggactgatc taccgcgccg tgcgggccac cggcctggca
     4441 tgtggccggg gcgccgaagg cctccaggtc cggagcagct cgttccgagc cctgcgcact
     4501 ccgtccccgg ggagggattc cgtggccgtg ttggtccggc ccgacgcctg ggtggtggtc
     4561 gggctcgaag ccgatccgcg
//
LOCUS       DASWKS010000494        10472 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_632207, whole genome shotgun sequence.
ACCESSION   DASWKS010000494 DASWKS010000000
VERSION     DASWKS010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632207"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..789)
                     /locus_tag="VGA78_13960"
     CDS             complement(136..789)
                     /locus_tag="VGA78_13960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895031.1"
                     /translation="MRWINALAALSVVALPLSAQEKDPDKKVAGGGTLPVGWSARLDK
                     ADASLANVKFAAMGSGWHVTTGPAVVLWKEADNTTGGFHAVASFTQTKAPAHPEAYGM
                     FIAGKNMKNDSTVTYTYFIIRGDGKYLVKKMTGKTAANLTQGWTESAAVVKQDSAGKQ
                     TNKIEVSAGQDGKVSWKVNGQEVYSATMTPAELNGVVGLRVNHNLDVHVDGFGVHKL"
     gene            894..1073
                     /locus_tag="VGA78_13965"
     CDS             894..1073
                     /locus_tag="VGA78_13965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895032.1"
                     /translation="MIDLLGVVLAGLGAFLIIGALTFVTLLIGALVTFMVILLAGPLV
                     DKVIKEPAPAGSAKP"
     gene            complement(1075..1446)
                     /locus_tag="VGA78_13970"
     CDS             complement(1075..1446)
                     /locus_tag="VGA78_13970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895033.1"
                     /translation="MSRSRLSGAQQAQLMYLEGLRPKFERIHRLIEEIANFQGGESTI
                     KTLIRLLDEQRHGASTLLLNSLADNLGMMSTVARRGGGHQMRVRALREGFSGLKTNFE
                     GAFRQASTPREAPKDEDEERS"
     gene            1589..4678
                     /locus_tag="VGA78_13975"
     CDS             1589..4678
                     /locus_tag="VGA78_13975"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9895034.1"
                     /translation="MKLSDTAIRRPVLASMLSVALVLFGVLGYRELSVREYPDVDPPI
                     VSVRTNLRGANPQVMETAVTDVLEEELSSLEGLRTMTSSSSEQNSNINLEFHLDRDIE
                     AAAQDVRDKVSRVRGRLPEEVEEPVVSKQDADARPIMFLSLTSERHDLMQLSDLANRI
                     VKRRLQTIPGVARADLRGERRYSMRVWLSASALASRGLTVQDVVAAIRARNVEVPAGR
                     IESQRREFTVRSLGELKTPGEFNDLVVSSAHNQVIRLRDVGNVELGPEDDRSRFRTNG
                     VPSVGVTIARQSKANVLEIADGVRAALPEIIALLPAGVKLEEGYDQSVYIKRSIKEAE
                     ETLIIAAGLVVLIIFLFLRNVRATIIPGLAIPASIVATFAIMAALGFSINNLTLLALT
                     LAIGIVVDDAIIVLENAYRHQEELGKPPEQAALDASNEIGFAVIATTIALVAVFTPLA
                     FLKGSTGRLFNEFGIAVAGAVLISGFVALTLTPMLCAKILRVPKSHGRLYQALEAGFD
                     GIATGYSKLLGAALRHRAVVLTGFAGITVLAGYTFTRLKREFVPSEDRGSFQISITAP
                     EGSTVAYTAQYQLQAERLMLDTPEIRTFNSMIAWGGRVNTGFLYTRLTDWSERDRSAQ
                     EIIQDLQPKLSKISGVMAFANNPPAFGGYGQPVQFVVKHPDFDQLAEAMDTLVRRARQ
                     VNGLINVDSDMRINKPELTVSFDRNRAEDLGVPVRDVATALQALLGGQRVSTFTRNNE
                     LYDVLVQMAPEARATPSDMAGIQLRGRDGQLIQLDAIARVAEGAGPRQLNHYDRVRSS
                     TLSASLAPGFTLGEAIDSLRAVGAEVLPSGHSIALSGESRELDESGSALYFAFLLALA
                     VVFMVLASQFESLVHPFTVLLAVPLAVSGALFTLWIAGSTINLYSQIGMILLIGLVAK
                     NSILLVEYTNQLKARGRSTLEAVLESGRIRLRPILMTSVATVMGAMPIMLGLGAGSQS
                     RRPLGYAIVGGVLFSTVLTLFLVPVAYLLFDRLTSRARRRRTAEAQEVASTLPVLGR"
     gene            4675..5955
                     /locus_tag="VGA78_13980"
     CDS             4675..5955
                     /locus_tag="VGA78_13980"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9895035.1"
                     /translation="MILALLAVLQASPADSLPRVTLAEALAQGVRLDPDYVRALGTIG
                     PAEWSRRAALITLVVPSVTASSDFSFFSIDQFNIGTGQQARRNASARIDARLEIFTGG
                     RKLAELSRARAELEGAQANEVLTRYLSALFIEENYYDVLGGRELLDVAQGRLRRAEEG
                     LAVARARVVSGAAVQSDSLQLVLERNNAQVARLRAEVALRSARLDLGRRIGRRGAVDA
                     VALDTLPVPDLPLSLPDLVTLALQVGPEYRVARANEGQADAILRARRGSYLPTLALSG
                     SVSSFDENWFPNALTRRTGVISLSLPLWDNGQRELNLARARASRDVARAVREDLERGV
                     EADVTLAYDSFVTARATLELDRSGLTVARENFRVQETRYRAGATTILDLLAAQDQLTS
                     AEANVVRSRYATRLAVAGLEAVLGRRLLNDRTEP"
     gene            5952..7028
                     /locus_tag="VGA78_13985"
     CDS             5952..7028
                     /locus_tag="VGA78_13985"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9895036.1"
                     /translation="MRFIFLGAVLLTAAACSKQAQGGQPVGRGGADRVVSVEVTEAVT
                     DTVVDAILATGQIESIQAIELRPEVDGRLVEILVREGALVNQGTPLFKVDDAELKSQV
                     ARAEAERDLARQALDRTRQLLADKAAAPADLERAEAQMRSTQANLELLQVRLDRTVVR
                     APFAGVTGARMVSLGDYVTNQTRLITLQTVNPQRASFQIPERYSDRLRERQRVLFQVA
                     ALPGRDFSGTVDFVDPRVQLPGRTITVKALVPNPQRVLQAGMFIEARLATEVRPNAVV
                     IPEDAITQIQGGAFIWIVVDGKAARRRVELGVRTPGYVEVQSGLEAGELVVVGGLDRL
                     VDGATVQVTLVDRRQERPDSVERH"
     gene            7128..8696
                     /locus_tag="VGA78_13990"
     CDS             7128..8696
                     /locus_tag="VGA78_13990"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HEX9895037.1"
                     /translation="MTDVTNLTDLTDRLSAQQTRAERTNYAETSSHDDVLTFLDSLAR
                     AGAGIRRGQLATSPQGREVPYIVAARPMVDGPGEAHRSGKPVIYLQGNIHAGEIEGKE
                     AALMLLRDLTLGSLRPLLDSVVLLLVPIYNSDGNDAFGPGERNRPGQNGPAIVGLRPN
                     GQGLDLNRDYLKQEAPETRGAARLISIWDPDLFIDLHTTNGSYHGYALTYSPGLNPNS
                     PPANEYVRDRFLPEVRRRMRERHRQEVYWYGNFRNQHPDSLTQGWETYDPRPRFGTNW
                     FGMRGRLAILSEAYSNADLRTRVSASYNFVLEILRLAAEERATIRRLVGAGVPRLDSV
                     TVRSRFAEPRQEDVIAEITEAAGDGAGGFSRRRRTGVFRTIRMPVFDRFAPLRKEALP
                     AAYLLPPQHSHIAEALQRHGIRVGRLMASWEGDAEAFRVDSLVLSSNLFEGHREVRVE
                     GLWQARPAGAAAGWFVVPTDQRLGLLAAYLLEPASEDGFATWNFLDRDLRRGRDAPVL
                     RLRRMPALLLTELP"
     gene            8727..9194
                     /gene="bcp"
                     /locus_tag="VGA78_13995"
     CDS             8727..9194
                     /gene="bcp"
                     /locus_tag="VGA78_13995"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HEX9895038.1"
                     /translation="MVTATAGTKAPSFSLPAEDGRTISLDDLKGKRVVLYFYPKDDTS
                     GCTTEACEFRDSWKAVEQAGAVVLGVSPDTVASHLKFKKKYSLPFPLLADTDHRVAEA
                     YGAWGEKSMYGRKYHGILRTTFIIDERGRIAKVFERVKPRGHAAEVLAALGEM"
     gene            9332..10276
                     /locus_tag="VGA78_14000"
     CDS             9332..10276
                     /locus_tag="VGA78_14000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895039.1"
                     /translation="MQNIRQLTFGGNNAEAYFSKSGRQLIFQRQDKVGEGCDQQYVIN
                     IDGSGLRRVSNGQGRTTCGYFYDNDRRVLYSSSFKHNPACPEPPDHSRGYVWPLGHLE
                     IYTARADGSDLQQLTDNGAYNAESTVSPDGTRIIFTSTRDWDIELYVMDVDGRNVRRI
                     THRVGYDGGAFYSPDGTRIVWRAAYPATPRDTADYLGLLEARLVRPARTEVWVADADG
                     SNPRQITKLGGANFAPFFHPDGRRIIFSSNWESPRSGAFDLYLINEDGTGLEKVTTHK
                     DFDSFPMFSPDGKKLVWASNRNPKSPGETNIFIAEWVN"
BASE COUNT         1713 a         3474 c         3467 g         1818 t
ORIGIN      
        1 tcaaggcggg ctaacggcaa cgccgttagc ccgcttgggt cgaagacggt cgaagagtcg
       61 aaggggtcga agacagtcga aggcggtcga gcttgttacc ccttcgaccg ccttcgacgc
      121 cttcgactgc ttcgactaga gtttgtggac cccgaaccca tccacatgca cgtcgaggtt
      181 gtgattcacc cgcagtccga cgaccccgtt gagctcggcc ggggtcatgg tggcggagta
      241 cacctcctgg ccgttcacct tccagctcac cttgccgtcc tggccggcag aaacctcgat
      301 cttgttggtc tgcttcccgg ctgaatcctg ctttaccacc gccgcacttt cagtccagcc
      361 ctgggtgaga ttggcggcgg tcttgccggt catcttcttt acgaggtatt tcccgtcgcc
      421 ccggatgatg aaataggtgt aggtgacggt gctgtcgttt ttcatgttct tgccggcgat
      481 gaacatcccg taggcctcgg gatgggccgg cgccttggtc tgcgtgaagg acgccacggc
      541 gtggaacccg ccggtcgtgt tatcggcttc cttccagagg acgaccgcgg gcccggtggt
      601 gacgtgccag ccgctgccca tcgcagcgaa cttgacgttg gccaacgacg cgtccgcctt
      661 gtccagccgg gcactccacc cgacggggag ggtgccaccc ccggcgacct tcttgtccgg
      721 gtccttttcc tgggcggaca gcggcagtgc cacgacgctg agggcggcaa gagcgttaat
      781 ccagcgcata acttcctcca actgggtcag ggggtgtgcg gtcggtgcgg aagcgtctaa
      841 cttaccgccc tcgcgtcgct tcaggtaacg cccggtgcgg gcaggggttg cacatgatcg
      901 atctgctcgg cgtggtcctc gccggtctcg gcgccttcct gataatcggg gctctcacct
      961 ttgtcaccct gctcatcggt gcgctggtga cgttcatggt gatcctgctg gccggtcccc
     1021 tggtcgacaa ggttatcaag gaaccggccc cggcgggttc cgccaagccg taactcacga
     1081 cctctcctcg tcttcgtcct tcggcgcctc ccgaggggtc gacgcctgcc ggaaggcgcc
     1141 ctcgaaattc gtcttgaggc ctgaaaaccc ttcccgcagg gcgcggaccc gcatctgatg
     1201 ccctcccccc cgccgtgcca cggtggacat catgccgagg ttgtcggcca gggagttgag
     1261 caagagggtc gaggccccgt gccgctgttc gtccagcaac cggatcaggg tcttgatcgt
     1321 ggattccccg ccctggaagt tcgcgatctc ctcgatcaag cggtggatcc gctcgaactt
     1381 ggggcggagc ccttccaggt acatcagttg tgcctgctgg gccccggaga gccggctgcg
     1441 agacatgggg gcctaaagta acatcggggg ggacctctgc gtatctatta gtcgcgcgtc
     1501 gcgattcatc ggtcatgagg aggttcccgg gggggtcccg gggccggtct cggggccgct
     1561 cgcgactcgc gatttgccca gcgcccatat gaaactctca gataccgcca tccgccgtcc
     1621 cgtgctcgcc agcatgctga gcgtggccct cgtgctgttc ggggtgctcg ggtaccgcga
     1681 gctttcggtc cgggaatacc ccgacgtgga tccgccgatc gtgtcggtgc gcactaacct
     1741 ccggggtgcc aatccccagg tcatggagac cgccgtcacc gacgtgctgg aggaggagct
     1801 ttcctccttg gaggggctcc ggaccatgac ctcctccagc tcggagcaga actcgaacat
     1861 caacctcgag ttccatctcg accgggatat cgaggccgcg gcccaggacg tccgcgataa
     1921 ggtgtcgcgg gtgcgcggac ggctcccgga ggaagtggaa gagccggtgg tgtccaaaca
     1981 ggacgccgat gcgcggccca tcatgttcct gtcgcttacc agcgagagac acgatctgat
     2041 gcagctgtcg gacctggcca accggatcgt caagcggcgg ctgcagacca ttccgggcgt
     2101 ggcgcgggcc gacctgcggg gtgagcggcg ttactccatg cgggtctggc tgtcggccag
     2161 cgccctggcc tcccgtgggc tgacggtgca ggacgtggtc gccgccatcc gggctcgaaa
     2221 cgtcgaggtc ccggcgggcc ggatcgagtc gcaacggcgt gaattcacgg tccggtccct
     2281 gggcgagctc aagaccccgg gcgagttcaa tgacctggtg gtgagctcgg cccacaacca
     2341 ggtcatccgt ctgcgcgatg tcggcaacgt cgagctgggc ccggaggacg accggagccg
     2401 gttccgcacc aacggggtgc cgtcggtcgg tgtgaccatc gcccggcagt cgaaggccaa
     2461 tgtcctcgag atcgccgacg gggtgcgggc ggccctcccc gagatcattg cgttgcttcc
     2521 cgccggcgtg aaactggagg aaggctacga tcaatcggtc tatatcaagc gttccatcaa
     2581 ggaggccgag gagacgctga tcatcgctgc cggactggtg gtgctgatca tcttcctgtt
     2641 cctgcggaac gtccgggcca ccatcattcc gggtctggcc attccggcct cgatcgtcgc
     2701 gaccttcgcg atcatggcgg cgctcgggtt ctcgatcaac aacctgacgc tgcttgcgct
     2761 cacgctggcg atcggcatcg tggtggatga cgccatcatc gtgctggaaa acgcttaccg
     2821 gcaccaggaa gagctgggca aaccgccgga gcaggccgcg ctcgatgcca gcaacgaaat
     2881 cggattcgcg gtcatcgcca ccacgatcgc cctggtggcg gtctttaccc cgctggcctt
     2941 cctgaagggg tccaccggcc gtctgttcaa cgagttcggg atcgcggtcg cgggcgcggt
     3001 gctcatttcg ggcttcgtgg cgctgacgct caccccgatg ctgtgcgcca agattctccg
     3061 cgttcccaag agccacggcc ggctctacca ggccctcgaa gccggattcg acggcattgc
     3121 caccgggtac agcaagttgc tcggagccgc gctgcggcat cgggccgtgg tcctgaccgg
     3181 gttcgccggc atcaccgtgc tggcaggcta caccttcacc cgcctcaagc gtgaattcgt
     3241 cccttcggag gaccggggca gtttccagat ctccatcaca gcgccggaag gctccaccgt
     3301 ggcgtacacc gcccagtacc aactgcaggc ggaacggctg atgctggata cgccggagat
     3361 ccggaccttc aacagcatga tcgcctgggg cggccgggtg aacaccgggt ttctctacac
     3421 ccggctgacc gactggtcgg aacgggaccg ctccgctcag gagatcatcc aggacctgca
     3481 gcccaaactg tccaagatct ccggagtcat ggccttcgcc aacaacccgc cggcgttcgg
     3541 cggctacggc cagccggtgc agttcgtggt gaagcacccc gacttcgacc agctggccga
     3601 ggcaatggat accctggtga gacgggcccg gcaggtgaac ggcctgatca acgtcgacag
     3661 cgacatgcgg atcaataaac cggagctcac cgtctccttc gaccgtaacc gggccgaaga
     3721 cctgggggtg ccggtccgcg acgtcgcgac cgcgctgcag gcgctgctgg gcggtcagcg
     3781 ggtcagtacc ttcacccgca acaacgagct gtacgatgtg ctggtccaga tggctcccga
     3841 ggcccgggcc acgccctcgg acatggcggg cattcagttg cggggccgcg acgggcagct
     3901 gatccagctc gacgccatcg cgcgcgtggc cgaaggcgcc ggtccgcgcc agctcaatca
     3961 ctacgatcgg gtgcggtcca gtaccctctc cgccagcctg gccccgggat tcacgctggg
     4021 tgaagccatc gattcgctgc gcgcggtggg cgccgaggtg ctcccgtccg gccacagcat
     4081 cgcattgagc ggcgaatcgc gcgagctgga cgagagcggc agcgccctgt acttcgcctt
     4141 cctgctggca ctggccgtgg tgttcatggt gctcgcatcc cagttcgagt cgctggtgca
     4201 ccccttcacg gtgctcctgg cggtcccgct ggccgtgagc ggcgccctct tcacgctgtg
     4261 gatcgccgga tccaccatca atctgtacag ccagatcggg atgatcctgc tgattggact
     4321 ggtcgccaag aactccatcc ttctggtcga atacaccaac cagcttaagg cgcggggccg
     4381 ttctaccctg gaggcggtgc tcgaatcggg ccggatccgg ctgcgtccga ttctcatgac
     4441 ctcggtggcc acggtgatgg gggccatgcc catcatgctc ggactgggcg ccggatccca
     4501 gtcgcgccgg ccgctcgggt acgccatcgt gggcggggtg ctcttctcca cggtgctgac
     4561 gctctttctc gttccggtgg cgtacctgct gttcgaccgg ctcaccagcc gtgcccgccg
     4621 ccgtcggacg gctgaggctc aggaggttgc ttccaccctg ccggtgttag gcagatgatc
     4681 ctggccctgc tggccgtgct ccaggcgagc ccggccgatt cgctgccccg ggttaccctg
     4741 gccgaggcac tggctcaggg tgtgcgcctg gacccggact atgtccgggc cctcggcacc
     4801 atcggtccgg ccgagtggag ccggcgggcg gcgctcatca ccctggtcgt cccgtcggtg
     4861 acggcctcga gcgatttctc gttcttctcg atcgaccaat tcaacatcgg gaccggacaa
     4921 caggcccgtc gcaacgcctc ggcccggatc gatgcccggc tggagatctt caccggagga
     4981 cgcaagctgg ccgagctctc ccgggctcgg gccgagctgg aaggcgccca ggccaacgag
     5041 gtcctgaccc ggtacctgtc ggccctcttc atcgaggaga actactacga cgtcctgggc
     5101 ggccgcgagc tgctggacgt ggctcagggt cggctgcggc gggccgaaga gggcctggcg
     5161 gtggcccggg cccgggtggt cagcggtgcc gcggtccaat ccgattccct gcagctggtg
     5221 ctggagcgca acaacgccca ggtggcgcga ctccgggccg aggtggccct gcggtcggcc
     5281 cgcctcgacc tgggacgccg gatcggacgc cggggagcgg tggacgccgt cgccctggat
     5341 accctgccgg tgcccgacct gccgttgtcg ctgcccgacc tggtgaccct cgcgctccag
     5401 gtgggaccgg agtatcgggt ggcgcgggcc aacgagggac aggccgacgc catcctccgg
     5461 gcccgccggg gcagctacct gccaaccctg gcgctctccg gaagcgtctc gtcgttcgat
     5521 gagaactggt tccctaacgc gctcacccgg cgcaccgggg tgatcagcct gagtctgccg
     5581 ctttgggaca atggacagcg cgagctcaac ctggcgaggg cccgggcctc ccgcgacgtg
     5641 gcccgagcgg tccgggagga tctggagcgg ggagtcgaag ccgacgtgac gctggcgtac
     5701 gacagcttcg tgaccgcccg cgctactctg gagctcgacc gcagcgggct gaccgtggcc
     5761 cgcgagaatt ttcgggtgca ggagacccgc tatcgcgcgg gcgccaccac cattctcgat
     5821 ctgctggccg cacaggacca gctcaccagc gcggaagcca acgtggtccg gtcccgctac
     5881 gccacccggc tcgccgtcgc cgggctcgaa gcggtgctgg gccgccgatt gctgaacgac
     5941 aggacggaac cgtgagattc atcttcctcg gcgcggtgtt gctcaccgcg gccgcgtgca
     6001 gcaaacaagc ccagggcggc cagccggtgg gccggggcgg cgcggaccgc gtggtctcgg
     6061 tcgaggtcac cgaggcggtg accgacaccg tggtcgatgc cattctcgcc accgggcaga
     6121 tcgaatcgat ccaggccatc gagctgcgtc cggaagtcga tggccgcctg gtggagatcc
     6181 tggtgcggga aggcgccctg gtgaaccagg ggaccccgtt gttcaaggtg gatgacgccg
     6241 agctcaagtc ccaggtcgcc cgggccgagg ccgagcgcga tctggcccgg caggccctgg
     6301 accgcacccg ccagctgctg gccgacaagg ccgccgctcc ggccgacctg gagcgggccg
     6361 aggcccagat gcgaagcacc caggccaacc tggagctgct ccaggtccgg ctcgaccgga
     6421 ccgtagtgcg ggcgcccttc gccggagtca ccggcgcgcg gatggtgagc ctgggcgact
     6481 acgtcaccaa tcagacccgg ctgatcacgc tgcagaccgt gaacccgcaa cgggcgtcct
     6541 ttcagatccc ggagcggtac tccgaccggc tccgggagcg gcagcgggtg ttgttccagg
     6601 tggcggcctt gcccggccgc gattttagcg gcacggtgga tttcgtcgac ccgcgggtcc
     6661 agctgcccgg acgcaccatc acggtcaaag cgctggtgcc caacccgcag cgggttctgc
     6721 aggcagggat gttcatcgag gcccggctgg ccaccgaagt ccggcccaac gcggtggtga
     6781 tccccgagga cgccatcacc cagattcagg gcggcgcctt catctggatc gtggtcgacg
     6841 ggaaggcggc ccgccgccgg gtcgagctcg gagtcaggac ccccggctac gtggaggtcc
     6901 agagcggact cgaggccggc gagctggtgg tggtcggcgg cctcgaccgt ctggtcgatg
     6961 gcgcgaccgt ccaggtcacc ctggtcgatc gccgccagga gcggccggac tcggtggagc
     7021 ggcactgaat gcggtcggtc gggtcggtcc caaaaaggtc ggtcgggtcg gtcagtcggt
     7081 cttttcggat cttggtaaag tggttcgcga tcttgggcgc gccggttgtg accgacgtga
     7141 ccaacttgac cgacctgacc gacagattat ccgcccagca gacccgagcc gaacggacga
     7201 actacgccga gacgtccagc catgacgacg ttctgacctt cctcgattca ctggcccgag
     7261 ccggcgccgg catccgtcgc ggacaactcg ccaccagccc ccagggacgg gaagtcccct
     7321 acatcgttgc ggcgcgtccc atggtggacg gaccaggcga ggcccatcgc agcgggaagc
     7381 cggtgatcta cctgcagggg aacatccatg cgggtgaaat cgaagggaaa gaggcggcgc
     7441 tgatgctgct gcgcgacctg accctggggt cgctccgccc gctgctcgat tcggtggtcc
     7501 tgttgctggt gccgatctac aacagcgacg ggaacgacgc gtttgggccc ggggaacgca
     7561 atcgcccggg ccagaacggg cccgccatcg tggggctccg gccgaacggg cagggtctcg
     7621 atctcaatcg cgactacctc aagcaggaag caccggaaac ccggggcgcg gctcggctga
     7681 tctcgatctg ggatcccgac ctcttcatcg acctgcacac caccaacggc agctatcacg
     7741 gctacgcgct cacctactcg cccggactga atcccaactc gccgcccgcc aacgaatacg
     7801 tgcgggatcg ttttcttccc gaggtccggc ggcggatgcg agagcggcat cgtcaggagg
     7861 tctactggta tggcaacttc cgcaaccagc accccgactc gctgacccag gggtgggaga
     7921 cgtacgatcc gcggccccgt ttcggcacca attggttcgg gatgcgggga cggcttgcca
     7981 ttctgagcga ggcctacagc aacgccgatc tgcgcacccg ggtctccgcc agctacaact
     8041 ttgtgctcga gatactccgg ttggccgcgg aggaacgtgc caccatccgg cgactggtcg
     8101 gggccggtgt tccccgactg gactccgtca cggtccgttc ccgtttcgcc gagccgcggc
     8161 aggaagacgt catcgcggag atcaccgaag cggccgggga cggcgcaggt gggttctccc
     8221 gccggcgcag aaccggggtg ttccggacca ttcgcatgcc ggtcttcgac cgcttcgctc
     8281 ctttgcggaa ggaagccctg cccgccgcct acctgctgcc gccgcagcac agccacattg
     8341 cggaagccct ccagcgtcac gggattcggg tgggtcgcct catggccagc tgggaagggg
     8401 acgccgaagc cttccgggtg gatagcctgg tgctgagctc gaacctgttt gaagggcacc
     8461 gcgaggtaag ggtggagggt ctctggcagg cacgaccggc cggtgcggcg gcgggctggt
     8521 ttgtcgtccc caccgaccag aggctgggcc tgctggcggc ctacctgctc gaaccggcat
     8581 ccgaggacgg cttcgccacc tggaatttcc tggatcgcga ccttcgccga ggccgagacg
     8641 ccccggtgct acggctcagg cgaatgcccg ccttgctgtt gacggagcta ccttaaaggc
     8701 tccgtttcgt cgtcaggatc cgtgtaatgg tgacagccac agccggtacc aaagccccct
     8761 cgttctccct gcccgccgag gacggccgga ccatttcgct cgacgatctc aagggcaagc
     8821 gggtggtgct ctacttctat cccaaggacg acaccagcgg ctgcacgacc gaggcctgcg
     8881 agttccgcga cagttggaag gcggtcgagc aggcaggcgc tgtggtcctg ggggtctcgc
     8941 ccgataccgt ggcatcccac ctcaaattca agaagaagta cagcttgccg tttccgttgc
     9001 tggcggacac cgaccaccgg gtggccgaag cctatggcgc ctggggcgaa aagagcatgt
     9061 atgggcggaa gtaccacgga attctgcgca ctaccttcat catcgatgag cggggaagga
     9121 tcgcgaaggt cttcgaacga gtgaagccca gagggcatgc agccgaggta ttggcggcgc
     9181 tgggggaaat gtgacggccc gacggacgga cggaccgacg gccggtctgc tcctcgtact
     9241 gttggcagcg ggctgcggcg gaacttccgc accacagtcc gtcggcccgt ccgtccgtcc
     9301 gtccgtccag cccgagccgg gcgagcacca tttgcagaac atccgccagc tcaccttcgg
     9361 cggcaacaac gccgaggcgt atttttcgaa gtcgggccgg cagctgattt tccagcggca
     9421 ggacaaagtg ggcgaaggct gcgaccagca gtatgtcatc aacatcgacg gctctggcct
     9481 gcggcgggtg tcgaatggtc agggacgcac cacctgcgga tacttctacg acaacgaccg
     9541 ccgcgtcctt tacagctcgt ccttcaagca caatccggcc tgccccgagc cgcccgatca
     9601 ttcccgcgga tatgtgtggc cgctgggcca tctcgagatc tacaccgccc gagccgatgg
     9661 gtcggatctg caacagctga ccgacaacgg tgcctataac gccgaatcga cggtttcccc
     9721 cgatgggacc aggatcatct tcaccagcac ccgcgactgg gacatcgagt tgtacgtcat
     9781 ggatgtcgat ggcaggaacg tgcggcggat cacccaccgg gtggggtatg acgggggcgc
     9841 tttctactct ccggatggca ccaggatcgt ctggcgagcc gcgtacccgg ccacccctcg
     9901 ggacacggcc gattatctcg gcctgctcga agcccgcctg gtgcggccgg cccgcaccga
     9961 ggtgtgggtg gccgacgccg atggctccaa tccgcgccag atcaccaaac tgggcggcgc
    10021 gaactttgcc ccgttcttcc accccgacgg acgccgtatc atcttctcgt ccaactggga
    10081 aagcccccgc agcggggcgt tcgatctgta tctgatcaac gaagacggca ccgggctgga
    10141 gaaggtgacg acccacaagg acttcgacag cttccccatg ttcagtcccg acggaaagaa
    10201 actcgtctgg gcctcaaacc gtaatccaaa gagcccggga gagacgaata tctttatagc
    10261 ggaatgggtt aactgacgtg aacgttccag gttccaggtt cagggttcca ggtgcggtgc
    10321 aacgtgcggt gccgggtgcc tcgtgccgag tgggtacaga ggctatcccg gggacgatgc
    10381 accagggact cagcaccgca ccttgcaccg cacttgtggc actgcgaacc tggaacgtgg
    10441 aactcaaacg ggagcagtga tggccgaagt tc
//
LOCUS       DASWKS010000495         2563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_633335, whole genome shotgun sequence.
ACCESSION   DASWKS010000495 DASWKS010000000
VERSION     DASWKS010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633335"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VGA78_14005"
     CDS             <1..619
                     /locus_tag="VGA78_14005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895040.1"
                     /translation="DGSNGLIVAPRLTWRPDPRHEWSIGPRLRRSQLGAQYIESGQVH
                     GVDEYVVSRLDNVTTSLTLRGTLTFTPTLTLQGYAEPFVSTVRHTSFRRVASAGARSP
                     ADRFEALDDRLVRSGDEIGVDFDRDGSVDLDLGSPDFTAVSLRSNLVLRWEYLPSSTL
                     FLVWQHGREAESGRGDYSLGGGLTDLTRAAAENVLLVKLSYWLGR"
     gene            complement(637..1128)
                     /locus_tag="VGA78_14010"
     CDS             complement(637..1128)
                     /locus_tag="VGA78_14010"
                     /inference="COORDINATES: protein motif:HMM:NF025701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease complex subunit PrcB family protein"
                     /protein_id="HEX9895041.1"
                     /translation="MRRFLPLLAALWLSCSDLVHNGIPADTDLVPFDSLDGLFGGSRI
                     ASQWNGGQARLVLRDQAAWAEVYTQATGNPDAQTISFTDRAVFFAATGAKQSTGHDIT
                     IDEVRKDREGRLYIVVREIRPGTGCGLQATPTSPVTAIRTINVYTVVVYIERPEVDPC
                     TVS"
     gene            1345..1932
                     /locus_tag="VGA78_14015"
     CDS             1345..1932
                     /locus_tag="VGA78_14015"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX9895042.1"
                     /translation="MPFARVTATLPAALLKAADRLARRRQQSRSAVLAEALQAYLDRS
                     AAEAPPADGTVVPVPRKPGGPLLTGFTNAALVAELERRLGTGRTVLVGVGDAGASRLR
                     YDRERLVGLCRRYGVLRLSLFGSVLRDDYGPESDVDVLVEFEPGRSPGLGIVDLQEEL
                     SALFGGRPVDLVTAQSLHRLIRSRVLENAVVQYAA"
     gene            1922..2269
                     /locus_tag="VGA78_14020"
     CDS             1922..2269
                     /locus_tag="VGA78_14020"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HEX9895043.1"
                     /translation="MPRDDTVYLVHMLETARKAVSKVAGLNQERFRADENLNLALVHL
                     IQMMGEAARRVSDETQRRHPGIPWRQVIGMRHRVVHDYLAVDLDIVWAVVQEDLPRLV
                     RVLEDVVSPDLLE"
     gene            complement(2298..>2563)
                     /locus_tag="VGA78_14025"
     CDS             complement(2298..>2563)
                     /locus_tag="VGA78_14025"
                     /inference="COORDINATES: protein motif:HMM:NF020071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent helicase C-terminal
                     domain-containing protein"
                     /protein_id="HEX9895044.1"
                     /translation="EAPVLAVRLQEVFGLQETPRIGGGRVPLTLHLLSPAYRPVQVTR
                     DLASFWKSAYFDVRKDLRGRYPKHHWPEDPLQAEPVRGAKRRL"
BASE COUNT          398 a          813 c          900 g          452 t
ORIGIN      
        1 tgacggcagc aacgggctga tcgtcgctcc ccgtcttacc tggagaccgg acccacgcca
       61 cgagtggagt atcggcccgc gcctccggag gagtcagtta ggcgcgcagt acatcgaatc
      121 gggccaggtg cacggggtgg atgagtacgt cgtatcccgg ctcgacaacg tgaccaccag
      181 tctcaccctg cgcggcaccc tcaccttcac ccccacgctc accctgcagg gctacgccga
      241 gccctttgtg tcgaccgtcc ggcacacgtc tttccggcgg gtggcctccg ccggggcgag
      301 gtcccccgcc gaccggttcg aggcgctgga cgaccggctg gtccgctcgg gtgacgagat
      361 cggcgtcgat ttcgaccgcg acggcagcgt cgatctggac ctgggatcgc ccgatttcac
      421 cgccgtctcg ctccgatcga acctggtgct ccggtgggaa tacctgccca gctcgacttt
      481 gttcctggtg tggcagcacg gccgcgaggc tgaaagcggc cggggcgact actcgttagg
      541 cggaggcctg accgacctga cgcgggccgc ggccgagaac gtgttgctcg tgaagctgtc
      601 gtactggcta gggcggtgat ccgcggagcg ggccaatcag ctgacggtgc agggatccac
      661 ttcgggccgt tcgatgtaga ccacgacggt gtagacgttg atggtgcgga tggcggtcac
      721 cgggctggtc ggggtggcct ggagcccgca gccggtcccg ggacggatct cccgcaccac
      781 gatgtagagc cggccttccc gatccttgcg gacctcgtcg atggtgatgt catggccggt
      841 ggattgcttg gcgcctgtgg cggcgaagaa gaccgcccga tcggtgaagc tgatggtctg
      901 ggcgtcggga ttcccggtcg cctgggtgta gacctccgcc caggccgcct gatcgcggag
      961 gaccaggcgg gcttgccctc cattccactg gctggcgatg cgggatccgc cgaacagccc
     1021 gtcgagggaa tcgaacggca ccagatcggt gtcggccgga attccattgt ggaccaggtc
     1081 actgcagctc aaccacagcg cggccagcag agggagaaac cggcgcatcg atcaaaggag
     1141 cctggtgcag gttggttgtc aatcattccg ggaattcctg gttgcccacc aggtatgtct
     1201 cccgcacgat cgatccgggc ccctcatcca gctgggatcg gtcatagcca ccagtggtgg
     1261 atccaatgat ccggtccggg ggctggggtt gcgccatcga tatgatcaag gtatgatgat
     1321 gataagacca cagtatgagc aggtatgccc ttcgctcgtg tcaccgccac tctccccgcc
     1381 gcgctgctca aagcggctga tcgcctggct cgccggcgcc agcagtcgcg cagcgcggtc
     1441 ctggcggagg cgcttcaggc ctatctagac cggtcggcgg cagaggcgcc gccggcggat
     1501 ggcaccgtgg tgccggtgcc ccgcaagccg ggtgggccgc ttctcaccgg gttcaccaac
     1561 gcggccctgg tagccgagct ggagcgccgg ctcgggaccg gcaggaccgt cctggtgggc
     1621 gtcggcgatg ccggggcgtc caggctgcgc tacgatcgag agcggctggt cgggctgtgc
     1681 cggcggtatg gggtcctgcg gctttccttg ttcggctcgg tcctccggga tgactacgga
     1741 ccggagagcg acgtggacgt gctggtcgag tttgagccgg gcaggtcacc ggggctcggg
     1801 atcgtggacc tccaggagga gctttcggcg ctgttcggcg gccggccggt agacctggtc
     1861 accgcgcagt cgttgcaccg cctcatccgg agccgggtct tggaaaacgc cgtggtacag
     1921 tatgccgcgt gacgacacgg tatacctggt gcacatgctg gagacggcgc ggaaggctgt
     1981 ctccaaggtg gccggcttga accaggagcg gttccgggcc gatgaaaacc tgaatctggc
     2041 gttggtgcac ctgatccaga tgatgggcga ggcggcccgt cgggtgtcgg acgagaccca
     2101 acgccgccac ccggggatcc cttggaggca ggtgatcggc atgcggcacc gggtggtgca
     2161 tgactacctg gcggtcgatc tcgacatcgt gtgggcggtg gtgcaggagg atcttccccg
     2221 gctggtccgc gtcctcgagg atgtcgtttc cccggacctg ctggagtagg cgaggcggtg
     2281 ggcgtcctat aatggattca taaccttcgt ttcgcgcccc gaaccggctc cgcctggagc
     2341 gggtcctccg gccagtgatg tttgggataa cggccccgca ggtccttacg cacgtcgaag
     2401 taggcggact tccagaagct ggccaggtcc cgggtcacct gcaccggccg ataggccggt
     2461 gagagcagat ggagcgtcag cggcactcgc ccacccccga ttcggggcgt ctcctgcagt
     2521 ccgaacacct cctgcagccg caccgccaga accggagcct ccg
//
LOCUS       DASWKS010000496         3477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_633368, whole genome shotgun sequence.
ACCESSION   DASWKS010000496 DASWKS010000000
VERSION     DASWKS010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3477
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633368"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1196)
                     /locus_tag="VGA78_14030"
     CDS             complement(<1..1196)
                     /locus_tag="VGA78_14030"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9895045.1"
                     /translation="MSIQLTFHGAAGRVTGSLHLLEAAGARLALDAGLFQGPRAESSE
                     LNRTLPFDPRRLDAIVVSHAHIDHIGRLPLLVRHGFHGPIYTTPATRDLSAVMLPDAA
                     MIQEKDAQFLAKRGKAGPESEPLYTLRDAVAVQELMVGVPYRRVQFIRKHLSFEYTDA
                     GHILGSASVDIRITEGMTTPHRLVFSGDIGRSDLPIIRDPDPPSGRIDTLIIESTYAD
                     TDHEPVVDAERHLGEIIRRVVGRGGKVLIPAFALGRIQELVYSLHALFRRGEIPGITI
                     YVDSPLGVDATAVFRIHPEIFDPREQLIAQTTDIFDFPLVRYVRDVQESKRLNGLTGP
                     AVIIAASGMAESGRILHHLASHIGDHRNLVLFVGYQAEQTLGRRIQEGADPVKIFGEM
                     HPRRAEV"
     gene            complement(1372..2013)
                     /gene="upp"
                     /locus_tag="VGA78_14035"
     CDS             complement(1372..2013)
                     /gene="upp"
                     /locus_tag="VGA78_14035"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEX9895046.1"
                     /translation="MPHPDLPNLTVLDHPLIQHKLALLRDFHTPTRDFRLLVSEIAML
                     MTYEVTRDLPTEVIEVQTPLEMTHGRMVAGKKLTLVPILRAGLGMVDGISLLIPSARV
                     AHIGLYRDHATLKPVSYYFKVPLDPGRDFFVLDPMLATGGSAAAAVQQLKDAGASRVR
                     FLCLVAAPEGVRTMLDAHPDIPVYAAALDRELNEFGYILPGLGDAGDRIFGTR"
     gene            2088..2309
                     /locus_tag="VGA78_14040"
     CDS             2088..2309
                     /locus_tag="VGA78_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895047.1"
                     /translation="MPIAEGNYSSGLLLQSALVIGHTPVHSPLPLAHLTGDMQGTATV
                     SFDGERYVRASKAIMKMMGETSSTEDPIS"
     gene            2505..>3477
                     /locus_tag="VGA78_14045"
     CDS             2505..>3477
                     /locus_tag="VGA78_14045"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9895048.1"
                     /translation="MPSSAAPQTGVPVTVIVPAFNEAATIGETIASLRAQTRTAAAIV
                     VVDDCSTDGTGDIARSLGVSVIRPERNTGSKAGAQSFALSQVATEFCLVLDADTVLAP
                     DAIEQLLPGFEEPGVVAACCTVLPRRLDSIWERGRYVEYLFAFTFYKQVQDQWGAPMI
                     SSGCCSMYRTRAVRAAGGWSARTLAEDMDLTWTLCQMGWRVRFMPKAICYPLEPHTWS
                     FLSRQLRRWSHGFVQNVRLHWRGLLDVPFLRSAVAVATWDAAIASLVYLLVLPLLAIG
                     LRNPWFLLGYVIDIPAIVVPVVVGGFRRREVLRALSCIPAFFALRTVN"
BASE COUNT          574 a         1094 c         1197 g          612 t
ORIGIN      
        1 acttccgccc ggcgcggatg catctcgcca aagatcttga cgggatcggc cccctcctgg
       61 attcgacggc ccagggtttg ttccgcctgg tagcctacga acagtaccag gttgcgatga
      121 tccccgatgt ggctggcgag atggtgcagg atccgtccgc tctccgccat gccggaggcg
      181 gcgatgatca cggccggacc ggtgagcccg ttgagtcgct tcgattcctg cacgtcccgt
      241 acgtagcgca ccagcggaaa atcgaagatg tcggtggtct gcgcgatgag ctgctcgcgg
      301 ggatcgaaga tctcggggtg gatccggaag acggcggtgg catcgactcc gagggggctg
      361 tcgacataga tggtgattcc ggggatctcg ccccgacgaa acagcgcgtg cagcgaatac
      421 accagctcct ggattcgacc cagcgcaaag gcggggatga gcaccttccc cccgcgaccc
      481 accactcggc ggatgatttc gcccagatgg cgttccgcat cgaccaccgg ctcgtggtcg
      541 gtatcggcgt aggtggattc gatgatgagg gtatcgatcc ggccggaggg cgggtcgggg
      601 tcgcggatga tgggcaggtc gctccggccg atgtcacccg agaagaccag ccggtgcggc
      661 gtggtcatcc cttcggtgat ccggatgtcg accgaggccg agcccaggat gtgtcccgca
      721 tcggtgtact cgaaagagag gtgcttgcgg atgaattgca cccggcgata cgggactccc
      781 accatcagct cctgcaccgc caccgcgtcc cgcagggtgt agagcggctc ggattcgggt
      841 ccggccttgc cccgtttggc gagaaactgg gcgtcctttt cctggatcat ggccgcatcg
      901 ggcagcatca ccgcggaaag atcgcgggtg gccggcgtgg tgtagatcgg gccgtggaag
      961 ccatgccgca ccagcagcgg cagccggccg atgtggtcga tgtgggcgtg actcaccacg
     1021 atggcatcga gccggcgggg atcgaaggga agggtgcgat tgagctcgct cgattcggcg
     1081 cgagggccct ggaacagccc ggcatcgagc gcgaggcggg cgccggcggc ttccagcaga
     1141 tggagcgagc cggtgacccg gccggcggca ccgtggaacg tcaattgaat cgacacgcac
     1201 gctcccgagg aggtggagag gggagagggg cgagggggga atcaaccgga gaatgcccaa
     1261 tggccagtgc ccattgcaga aggaggccgc ctgagtaggt cccctctgct atgggcattg
     1321 ggcattcggc acgctccagt tcactccgcc ctctcacctc atccctctga gctatctcgt
     1381 tccaaagatt cgatcccccg cgtctcccag gcccggcagg atgtatccga attcgttgag
     1441 ctcccggtcc agcgcagcgg catagaccgg gatatccgga tgggcatcga gcatggtccg
     1501 gaccccttcg ggcgcggcca ccaggcagag gaagcgcact cgactggcgc ccgcgtcctt
     1561 gagctgctga acggcggcgg cggccgatcc tccggtcgca agcatcgggt cgaggacgaa
     1621 gaagtcccgc cccgggtcga gcggtacctt gaagtagtag ctcaccggct tgagggtggc
     1681 gtggtcgcgg tagagcccga tgtgcgccac ccgggccgac gggatcagca gggagatgcc
     1741 gtcgaccatg cccagcccgg ctcgcaggat gggtaccagc gtcagcttct ttccggctac
     1801 catgcggcca tgggtcatct cgaggggagt ctggacctcg atgacctccg tcggcagatc
     1861 gcgcgtgacc tcgtaggtca tcagcatcgc gatttcgctc accaggagcc gaaagtcacg
     1921 ggtgggcgtg tgaaagtccc gcagcaacgc aagcttgtgc tggatcagcg ggtgatccag
     1981 gacggtcagg ttgggcaagt cgggatgggg catcacacga atatgtcgac aaacggcggg
     2041 gacgtggcag gggagggggg aatgaactgg agagtgccga atgcccaatg cccattgcag
     2101 aggggaacta ctccagcggc ctccttctgc aatcggcact ggtcattggg cacactccgg
     2161 ttcattcccc ccttcccctc gctcacctga ccggcgacat gcagggcacc gccaccgtct
     2221 ccttcgacgg cgaacgctac gtacgggctt cgaaagcgat catgaagatg atgggggaaa
     2281 ccagctccac ggaggacccg atctcgtgac ggactgacgg atgacggaca ggtgggcggg
     2341 ggggaccagg gttccgctct ccgccttgct tttgcggatt ccgtcccgtc cggtcccacc
     2401 acctggctga atccattcta caactcgctg ttgcataatg ggttgagggt cattccctga
     2461 gccgctcctg cggcacaggg cctgcactct tgcgggggtt gaccatgccg tcatccgccg
     2521 cgccccagac cggggtccca gtcaccgtca tcgtcccggc cttcaacgaa gccgccacga
     2581 tcggcgagac cattgccagt ctccgggctc agactcggac ggccgcggcc atcgtggtgg
     2641 tggatgactg ctcgaccgat ggcaccggcg acatcgcccg ctcgctgggt gtcagcgtga
     2701 tccgtcccga gcggaacacc ggctccaagg cgggggcgca gagcttcgcg ctgagccagg
     2761 tggccacgga gttctgcctg gtactggacg ccgacaccgt tctggcgccc gacgcgatcg
     2821 aacagctgct gccgggcttc gaggagcccg gcgtcgtcgc cgcctgctgc acggtgctgc
     2881 cgcgacggct ggactcgatc tgggagcggg gccgttacgt cgagtatctg ttcgccttca
     2941 cgttctacaa gcaggtgcag gaccagtggg gcgcgccgat gatcagcagc ggctgctgtt
     3001 ccatgtaccg gacccgggcg gtgcgcgcgg ccggcggttg gtcggcgcga accctggccg
     3061 aagacatgga tctcacctgg accctgtgcc agatggggtg gcgggtgcgc ttcatgccga
     3121 aagcgatctg ctacccgctc gagccccaca cctggtcgtt cctgagccgc cagctgcgcc
     3181 gctggtcgca cgggttcgtg cagaacgtgc gactgcactg gcgaggcctg ctggacgtgc
     3241 ccttcctgcg ctccgcggtg gcggtcgcca cctgggacgc cgcgatcgcc tcgctggtct
     3301 atctgctggt gttgccgttg ctggcgatcg ggttgcgcaa cccgtggttc ctgctgggct
     3361 acgtgatcga catcccggcc atcgtggtgc cggtggtggt ggggggcttc cggcgccggg
     3421 aggtgctccg ggccctgagc tgtattcccg ccttcttcgc actccgaacc gtgaacg
//
LOCUS       DASWKS010000497        10216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_264174, whole genome shotgun sequence.
ACCESSION   DASWKS010000497 DASWKS010000000
VERSION     DASWKS010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10216
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264174"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..1540)
                     /locus_tag="VGA78_14050"
     CDS             complement(20..1540)
                     /locus_tag="VGA78_14050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEX9895049.1"
                     /translation="MTDQTSDTGFFGHPRGLSTLFFTEMWERFSYYGMRALLILFMTA
                     PLAIGGLAMPVEVAGAIYGTYTAMVYLMTLGGGWVADKLLGLRRSVFWGGFLIMLGHI
                     SLALPAVPTFYFGLVLVVLGTGLLKGNISALVGQLYGPEDIRRDAGYSLYYMGINLGG
                     FLGPLVCGYLAQDERFRTMLEGWGMSPQASWHWGFGAAAVGMFFGLIQYVLGKHRLPA
                     SGEAPAGVKTPEEAAAARGTAGRALAIAALLIAVLAGLQMTGTIGITPAGIAVTLDWL
                     LLVATVGFFAWLFSVGQWTKDERRRLVVILVLFLGASVFWAGFEQAGSSLNLFAERNT
                     ANTIFGFAYPASWLQSVNSFFIIVFAPVFAWLWIKLGARNPSSPAKFSLGLLLLAAGF
                     GVMIFAGIAATGGEKVSPMWLISFYLLATFGELCLSPVGLSAMSKLAPERVAGLMMGV
                     WFLASSVGNKIAGRMGGLYESLSLPMIFALTTAFPLVFALILAALVRPIRRMLART"
     gene            complement(1547..2089)
                     /locus_tag="VGA78_14055"
     CDS             complement(1547..2089)
                     /locus_tag="VGA78_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895050.1"
                     /translation="MSLEGIRARIDQLLADLNRVGDARSAAAGLYDAMVETKTAIGAV
                     RDALIATDRELVVERQRLDDAERRGRLAQEIHDNETVELARIWTAKHRERVDLLERKR
                     LVQQDELAYAERQLAEMAEQYRKAKAGIPPGTAPRAVPPDPDPDFARLEHDADRQQRA
                     ATVEQQLAELKRKLGRQPPP"
     gene            2450..2833
                     /locus_tag="VGA78_14060"
     CDS             2450..2833
                     /locus_tag="VGA78_14060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895051.1"
                     /translation="MLLDEFAKPSQTLSAPPGQAPEVVAVRVAAGPAYRGLVRTVADS
                     AWIVNVEGQIPSGMVPKFGVVIVGPDGAPRGVMLYDTPPVAGAPSIGSVTVGPLTLPL
                     LGLQTNVSGLEDKICPFFPDSLRRP"
     gene            2847..3920
                     /locus_tag="VGA78_14065"
     CDS             2847..3920
                     /locus_tag="VGA78_14065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895052.1"
                     /translation="MRILHVASGREWRGGQRQTWLLARGLARIPGISQTIVTARDGEL
                     ARRLEEAALPVRGAKWRWGLDPRAAFTVWLAARGADLLHAHDAHAVTLAAVAARLTHQ
                     PFIATRRMTRPLRRPGPWRRATRVIAISGPVRDTLVRSGIASERIEVIPPAIEVDRTS
                     QVKPIEWFHAYGIPLQSPVVVTVAALTREKGIDTLLEAAAAIHPRLPQLHWVVAGDGV
                     ERPALETRAGALHTRPYVHFVGHLSDPLPVISGAAVLVLPSREEGFGSVILDAMALGI
                     PVAASAVGGVPEALAGGGGELVPAGDGAALAAVVERMVGDVAHRMRLGESGRRAVRRF
                     DLDAMVERVVAVYRSVKESIEAQ"
     gene            3917..4654
                     /locus_tag="VGA78_14070"
     CDS             3917..4654
                     /locus_tag="VGA78_14070"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX9895053.1"
                     /translation="MIYVCIPSYDEGPTIGLVLWKTRQVFGDSGREYQLLVVDDGSTD
                     RTAETLEPYAKVLPLSVVRHDHREGYAASVETLLQLALERSDRPRRDCAVLMQADFSH
                     LPQFVPDLVRGIDSGADLVVGEAKLEGAPSRGYRWLRRWAPALLGTKAKVPGLRDMVS
                     GFLAVRLSCLRLALKDSGDQLLLTDGWAANAELISRLAANARRVEAVPVVERLNLRQR
                     PSRVTPWDEAKALWGARRALRLVGATR"
     gene            4651..5373
                     /locus_tag="VGA78_14075"
     CDS             4651..5373
                     /locus_tag="VGA78_14075"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEX9895054.1"
                     /translation="MIPTLIVMAALQNGTVSAEEPKRPFRVGEELQYSAKLGFLRLGT
                     GLISVESIDTVRGVPSYYFRFALEGGNSLYRVNSVLESWTGVNDLKSRRFRQDITERG
                     KQTRLRTYEIFPDSGYYRLEGESEQPPTPTHPLDDASFMFYMRTQPLEVGREYRLDLY
                     FRTEKNPVILRVEKREEMELPDGSRVNCLVVAPIVGDRGIFAPRQEARVWLTDDERRI
                     PVQIRTRYPFGVVILRLEKLTL"
     gene            5438..5863
                     /locus_tag="VGA78_14080"
     CDS             5438..5863
                     /locus_tag="VGA78_14080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895055.1"
                     /translation="MITRRLCFPLLLALACGGGSGTAVPTPMASDDRLSEIIAAALDS
                     DARAESADTLYASDAVIVADGENRFAPPRYASIGSGGAVAITTSRLEVRGMVAWAQVE
                     YRWMSTRESSVREGHVTFVLAPDERGAWRIRHAHSSSPH"
     gene            complement(5903..6106)
                     /locus_tag="VGA78_14085"
     CDS             complement(5903..6106)
                     /locus_tag="VGA78_14085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895056.1"
                     /translation="MVRNVVGYAVFAAVVLMALKLLGFVWGVLGTLLWLAFLGFVFYL
                     LLRVFAPGTADKVRDSIKGEPKP"
     gene            6199..7308
                     /locus_tag="VGA78_14090"
     CDS             6199..7308
                     /locus_tag="VGA78_14090"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9895057.1"
                     /translation="MSVNPDVLIIGGGVVGAACARELALAGRRIVCIEPGGQTGQGWR
                     AAAGLLSPQVEGDEDDPLLEVGLAGREWHLTTRETLEGTTGIHLGLTLCGIASLAASA
                     NDAERLKTLVAWQRQQGLYCDWLLPDEIRHRWPWLPDSHGALFAPQDGSIDPVALVQA
                     LIQDGARLGVRRIEDRITALDVENGRLVGARGRERYQAGSVILAAGAWSGRIGNLPRP
                     VSVEPVRGQMIALPRPSQLEEDVIVFGGHGHYLLTRGDELLAGTTMEHAGFDSVTTGE
                     GIARVHQGAERLCGLVRGSEPLRAWAGLRPGTPDGLPIIGPEPRLEGLWYATGHGRNG
                     VLLAGITAIVLLQMMQREATLESVAAFRPERFWNW"
     gene            7490..8215
                     /locus_tag="VGA78_14095"
     CDS             7490..8215
                     /locus_tag="VGA78_14095"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HEX9895058.1"
                     /translation="MTPFSLHRALPFASLGLTLGAAAIGVAAASDHQDTPEVELNALS
                     DMTDVYAFPSPTAGRIVLVMNSRAFLTPAQSPSAGFDRNLLYQFKIDNTGDAVEDRVI
                     QVTFSGSGADQQVQVRGPMAPGVIGAMNNEVASTPPALSGRIGTALGSTGGLQVFAGP
                     RDDPFFIDLEQFFRIVPDRKPVTGQLSQLPDQPSASAFRAAGQAVNYVAGFNVLSIII
                     ELPVSDLTTGGNPRIGIWGTISR"
     gene            8242..8772
                     /locus_tag="VGA78_14100"
     CDS             8242..8772
                     /locus_tag="VGA78_14100"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HEX9895059.1"
                     /translation="MKTLVLPALLLLPLLAGCSDDDNDVTGPDGARMYHQVQRLGNPL
                     VSEVFLAKRSHPTHGATGPAQDVAQIGAELRNFVLTVAGRNQTVANTLQAVLLPDMLI
                     VQTNKAPGSAGWLSWALADGWGGRTLADDVVDAGLMAVFGPLLDPDNVSPGLATDNVA
                     SDSQFQATFPYLGNPN"
     gene            8772..9962
                     /locus_tag="VGA78_14105"
     CDS             8772..9962
                     /locus_tag="VGA78_14105"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895060.1"
                     /translation="MPSRVTQALGFLGAVATLGVLVIPIEGGEPTPLVSPLPPPGDVR
                     EADIRFYQARVTTDPIGALDRMRLGALLLDRARASGEARDLIRAEELARESIALRQAH
                     NAAAWHLLAAALLGQHRFLEALEVAERLVAMNPEATGARALRGEILLELGRYPAADSV
                     FAGLGLQRYQPNVAPRYARWLELRGRSGGARRLLERARVDAVRNGLPDDQIAWYHLRL
                     GELALRHGRHRQARGWLESGLAIRPADWRLLAVRARLALAEGDGQLAIALGDSSLSLH
                     FDPATLALMGDAWAREGEPSRAEAFFRGLETAAGSAPRGGYHRAWYLALLDHQRQVPL
                     VLAQVTRDLETRQDIYGWDLLAWALHQSGRRAEARAAMSLALQWGTDDPDLRRHTRAI
                     EASP"
     gene            9959..>10216
                     /locus_tag="VGA78_14110"
     CDS             9959..>10216
                     /locus_tag="VGA78_14110"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEX9895061.1"
                     /translation="MTGLVGYVGLGFRHIADFAAMDHLLFLVALVAPYRVRDWRHLLL
                     VASAFTVGHSLTLALAVTDVVRLPTALIEFLIPVTIILAAAG"
BASE COUNT         1668 a         3329 c         3500 g         1719 t
ORIGIN      
        1 agagtgtcag tgagtgtttt taggttctcg ccaacatccg tcgaatcggt ctgaccaggg
       61 cagccaggat cagcgcgaat accagcggga aagccgtggt gagcgcgaag atcatcggca
      121 gcgagagcga ttcgtagagt ccgcccatcc ggcccgcgat cttgttgccg accgatgagg
      181 cgaggaacca aacccccatc atcaatccgg cgacccgttc aggtgccagc ttggacatgg
      241 cgctcaggcc gaccggactg aggcagagct cgccgaaggt cgccagcaga tagaagctga
      301 tcagccacat cgggctcacc ttctcgcctc cggtggcggc gatgccggcg aagatcatca
      361 cgccgaaccc ggcggccagc agcagaaggc cgagcgagaa cttcgccgga ctggagggat
      421 tgcgcgcgcc cagcttgatc cacagccagg cgaaaaccgg ggcaaagacg ataatgaaga
      481 aggaattcac cgactgcagc cagctggccg gataggcgaa gccgaagatg gtgttggcgg
      541 tgttgcgttc ggcgaacagg ttgaggctcg acccggcctg ctcgaagccg gcccagaaga
      601 ccgaggcccc caggaagagg accagtatca ccaccaatct ccggcgttca tccttggtcc
      661 actgtcccac cgaaaagagc caggcgaaaa accccaccgt ggccaccagt agcagccaat
      721 ccagcgtgac ggcgattccg gccggcgtga tcccgatggt accggtcatc tggagaccgg
      781 ccaggaccgc gatcagcagc gcggcaatcg cgagagcccg gcccgcagtc ccccgcgccg
      841 ccgcggcttc ttcgggggtt ttcacgccgg ccggtgcctc acccgatgcg ggcaggcggt
      901 gcttgccgag cacatactgg atcaacccga agaacatgcc cacggcggcg gcgccgaagc
      961 cccagtgcca cgaggcctgg ggtgacatgc cccacccttc gagcatggtg cggaagcgct
     1021 catcctgggc caggtacccg cagaccagcg gtcccagaaa cccacccagg ttgattccca
     1081 tgtaatagag cgagtagccc gcgtcgcgcc ggatgtcctc cgggccatac agctgaccca
     1141 ccagggcgga aatgttgcct ttgagcagac cggtccccag aactaccagg accagaccga
     1201 agtagaaggt ggggaccgcc ggcaaggcga gcgaaatgtg gcctaacatg atcaaaaagc
     1261 cgccccagaa caccgagcgt ctgagtccca gcagtttgtc cgcgacccag cccccgccca
     1321 gggtcatcag atacaccatg gcggtgtagg tcccgtagat ggctccggct acttccaccg
     1381 gcatggccag cccgccgatc gcgagcggag cggtcatgaa caggatcagg agcgctcgca
     1441 tcccgtagta gctgaagcgc tcccacatct cggtgaaaaa cagggtcgac aggccgcggg
     1501 gatggccgaa aaacccggtg tcggaggtct ggtcggtcac ggagtctcag ggtgggggtt
     1561 ggcgcccaag cttgcgtttg agctcggcaa gctgctgctc caccgtcgcg gctcgctgct
     1621 ggcgatcggc atcgtgctcc aggcgggcga agtccggatc ggggtcgggc ggcacggccc
     1681 tcggggcggt tcccggcgga atgccggcct tggccttgcg gtactgctcc gccatctccg
     1741 ccagctggcg ttcggcgtag gccagctcgt cctgctgaac caggcgtttg cgttcgagca
     1801 ggtcgacccg ctcccgatgc ttggcggtcc agatgcgagc cagctctacg gtttcgttgt
     1861 cgtggatttc ctgagccagc ctgcctcgcc gctcggcatc atccaaacgc tggcgttcga
     1921 ccaccagctc gcggtcggtg gcgatcagtg cgtcccggac cgcgccgatc gccgtcttgg
     1981 tctctaccat ggcgtcgtac aggccggctg ctgctgaacg ggcatcgccc acccgattga
     2041 gatcggcgag cagctggtcg attcgcgcgc ggatcccctc gagcgacatg ccggatatgt
     2101 tagcgagtcg tctgaaggtg cgctacgcgc accggcacgt tccatgttcc gggttccggg
     2161 tgccgcactg ggtgcggtgc tacgtgcggt gctgggtgcc gggtaccgag tgcggaatcc
     2221 tgcaggagac ccggcacgcg gcgcacccaa ggcaccacac aaggcaccgc acaaggcacc
     2281 gcaccaggca ccgcacccgg aacgaggaac ccggaacccg gaacccggaa cggtggttta
     2341 gctttccccc atgcgtctct cagcaatttc acttgttgca ttgagcgctt gcggtagctc
     2401 gagcggcggc aaccccgctt gcggtatcac cgccctggcc ggggcgacca tgctactgga
     2461 tgaattcgcg aaaccatccc agacgctcag cgcgccaccc ggccaggctc ccgaggtcgt
     2521 ggcggtgcgg gtcgcggccg ggccggcgta tcgcggtctg gttcgcaccg tggcggactc
     2581 cgcgtggatc gtgaacgtgg aaggtcagat ccccagcggg atggtgccga aattcggggt
     2641 cgtgatcgta ggccccgacg gagcaccgcg aggggtcatg ctctacgaca ccccaccggt
     2701 cgcgggcgct ccgagcatcg gtagcgtcac ggtcgggcca ctcacccttc ccctcctcgg
     2761 cctgcagacc aacgtttcgg ggctcgagga caagatctgc ccctttttcc ctgattcgct
     2821 gcggcgacct tgagtatcgc gagtcagtga gaatcctcca cgtcgcctca ggccgggagt
     2881 ggcgcggggg tcaacgccag acctggctgc tggctcgcgg actggcccgc atacccggga
     2941 tctcgcagac gatagtgacc gcccgcgacg gggaattggc ccggcggctg gaagaggctg
     3001 ccctgccggt gcggggcgcg aaatggcggt ggggcctcga tccccgcgcc gcgttcaccg
     3061 tgtggctcgc cgcgcgaggc gccgacctgc ttcacgcaca cgatgcccat gccgtcaccc
     3121 tggccgcggt agcggcccgc ctcacccacc agcccttcat cgccactcgg cgcatgaccc
     3181 ggccgctccg gaggccgggc ccgtggcgac gggcgacccg cgtcatcgcc atctccggtc
     3241 cggtccgaga cacgctggtg cggagtggca ttgcgtccga acggatcgag gtgattcctc
     3301 cggccatcga ggtcgatcgc accagccagg tgaagccgat cgagtggttc cacgcatacg
     3361 ggattcccct gcagtccccc gtagtggtga cggtcgcggc cctcacccgg gaaaagggga
     3421 tcgacacctt gctggaggcg gccgccgcga ttcacccgcg gttgccccag ctccactggg
     3481 tggtcgccgg cgacggggtg gaacgtccgg cgctggagac cagagctggt gcgctccaca
     3541 cccggccata cgtccacttt gtgggccacc tctcggatcc gctcccggtc atttcaggcg
     3601 cggccgtgct ggtgctgccc tcccgtgaag agggattcgg atcagtcatt ctggacgcaa
     3661 tggcgctggg aatcccggtg gccgcgagtg ccgtaggtgg tgtaccagaa gcacttgcgg
     3721 gtggtggtgg cgagctcgtg ccggccggtg acggagcggc gctggcggcg gtcgtggagc
     3781 ggatggtggg tgatgtggcc catcggatgc gtttggggga gtccggtcgg cgggcggtgc
     3841 gccgattcga cctggatgcc atggtggagc gggtggtggc tgtatatcgt tcggtcaagg
     3901 agtcgattga ggcacaatga tttacgtctg cattccaagt tacgatgaag gccctacgat
     3961 tgggctcgtc ctgtggaaga cccgccaggt tttcggggac tccgggcgcg agtaccagtt
     4021 gctggtggtg gatgatgggt cgaccgatcg gaccgcggag acgctcgagc cctacgccaa
     4081 ggtgttgcct ctgagtgtgg ttcgtcatga tcatcgcgaa ggatacgccg cctcggtgga
     4141 gaccctgctg cagctggcgc tggagcggtc cgatcggccc cgccgcgact gtgccgtgct
     4201 catgcaagcc gacttttcgc acctgcccca attcgtcccc gacctggtcc gagggatcga
     4261 cagcggcgcc gacctcgtgg tgggggaagc aaagctggaa ggagcgcctt cgcgggggta
     4321 tcgctggctc cggcgctggg caccagcgct gctcggcacc aaggcgaagg taccggggct
     4381 gcgtgatatg gtgtccggct tcttggcggt ccggctctcc tgcctgcgac tggcattgaa
     4441 ggactccggc gaccagctgt tgctgaccga cggctgggcc gccaacgccg aactgatcag
     4501 ccgcctggcg gcgaacgccc gcagggtgga agcggtcccc gtcgtggaac gactcaacct
     4561 gcgtcagcgg cccagccggg tgactccctg ggacgaggcg aaggcgttgt ggggggcgcg
     4621 gcgcgccctg cggctggtgg gagcgacgcg ttgattccta ccctgatcgt catggcggcg
     4681 ctccagaacg gtaccgtgtc agccgaggag ccgaaacgcc ccttccgagt cggagaagag
     4741 ctgcaatact cggccaagct gggatttctt cgactgggga ccggcctgat ttccgtcgag
     4801 agcatcgata ccgtccgggg agtgccctcg tactatttcc ggttcgcgct cgagggcggc
     4861 aactcactct accgggtgaa cagcgtcctg gaatcgtgga ccggggtgaa cgatctcaaa
     4921 tcgcgccgct tccggcagga cattaccgaa cgcggcaagc agaccaggtt gcggacctac
     4981 gagatcttcc ccgattcggg ctactatcgt ctggagggcg aatcggagca gccacccacc
     5041 ccaacgcacc cgctggacga cgcatcgttc atgttctaca tgcgcaccca gccgcttgag
     5101 gtgggccggg agtaccggct cgacttgtac ttccgcaccg agaaaaaccc ggtgatcctg
     5161 agggtggaga agcgggaaga aatggagctc cccgacgggt ccagggtgaa ctgcctggtg
     5221 gtcgctccga tcgtgggcga tcgcggcatc ttcgcgcccc gccaggaggc ccgggtgtgg
     5281 ctgaccgatg acgagcggcg gatcccggtg cagatccgga cccgctatcc cttcggcgtg
     5341 gtaattctca gactggaaaa gctcacgctc taaaggccaa gtactgagta ctgagttttg
     5401 agtacggagt gctggggact gaggactgag cggccccgtg atcacccggc gattgtgctt
     5461 ccccctgttg ctggccctgg cgtgcggtgg cggctcgggc acggctgttc caacgcccat
     5521 ggcgtcagac gaccgtctga gcgaaatcat cgccgccgcg ctcgactccg acgcgcgggc
     5581 cgaatccgcc gacacgctct atgcctccga tgccgtcatc gtggccgatg gcgagaatcg
     5641 attcgctcct ccgcgctacg ccagcatcgg gagtgggggc gcggtcgcga tcaccaccag
     5701 ccggctcgag gtgcgcggca tggtggcctg ggcccaggtg gagtaccgct ggatgtcgac
     5761 tcgggaaagc tcggtgcggg aaggtcacgt gacgttcgtg ctggcgcccg acgaaagagg
     5821 ggcgtggcgc atccgccacg cccactcttc gtcgcctcac tgacaggact caggactaag
     5881 gacttcggac ttagtcctga ggttatggct tcggttcgcc cttgatgctg tcgcggacct
     5941 tgtcggccgt gccgggagcg aagacccgga gcaggaggta gaacacgaag ccgaggaacg
     6001 cgagccagag tagcgtgccc aggacgcccc agacgaaccc gaggagcttg agcgccatga
     6061 gtacgaccgc cgcgaagacg gcgtaaccca ccacattgcg gaccatgttc agcactcctt
     6121 cgtcgaggcc gtccggcccc catggccggg acgtgagcca ctacgccgga cgtttcaaaa
     6181 agtttcgccg gatcccaagt gtctgtcaat cctgacgttc tcatcatcgg tggcggggtg
     6241 gtcggagcgg cctgcgcccg ggaacttgcc ctagccggtc gccggattgt gtgcatcgag
     6301 ccgggagggc aaaccggcca gggatggcga gccgcggccg gtctgctctc ccctcaggtg
     6361 gagggggacg aagacgatcc gcttctggag gtgggtctgg cgggccggga gtggcacctg
     6421 accacacgcg agacgctcga ggggactacc gggatccacc tgggattgac cctctgcggg
     6481 attgcctcgc tggccgcctc ggcgaacgac gcggaacgac tcaagaccct ggtggcttgg
     6541 cagcggcagc aggggctgta ctgcgactgg ctgctgccgg acgaaatccg gcatcggtgg
     6601 ccctggctgc ccgattcgca tggggcgctg ttcgcgcccc aggatggctc gatcgacccg
     6661 gtggcgctgg tgcaggccct gattcaagac ggggctcggc tgggagtccg ccggatcgag
     6721 gaccgaatta ccgcactcga cgttgaaaac ggccgcctgg tgggtgcccg ggggcgggag
     6781 cgctaccagg cgggcagcgt gatcctggcg gcgggcgcct ggtccggccg gattggcaat
     6841 ctgccccggc cggtctcggt ggaaccggtg cggggccaga tgatcgcgct accgcgacca
     6901 tcccagctcg aggaagacgt gatcgtgttc ggcggtcacg gccactacct cctcacccgg
     6961 ggcgatgagc tgctggccgg caccaccatg gaacatgcgg gcttcgattc ggtcaccacc
     7021 ggggaaggaa tcgcgcgggt ccaccagggc gccgaacggc tgtgcgggct ggtccgtgga
     7081 tcggagccgc tccgagcctg ggccgggctc cggcccggta ccccggatgg tctgccgatc
     7141 atcggccccg aaccgaggct ggaagggttg tggtacgcca ccggtcacgg ccgcaatggt
     7201 gtcctgctcg ccggtatcac cgccatcgtg ttgttgcaga tgatgcagcg cgaggccacg
     7261 ctggagagcg tggcggcatt ccggcccgag cgattctgga actggtgatc tacaaatagt
     7321 cgaaggcagt cgaagcggtg tgggaggggg gacctctttc gactgtcttc gaccggcttc
     7381 gaccgccttc gactgccttc gaccgccttc gacccccgga tagatccgct ctcccggctg
     7441 cgtcgtagaa cctcacgacg cgaccaccca ccaggagagg gatccaccca tgaccccgtt
     7501 ctcgttgcat cgtgccttgc cgttcgcgag cctcggtctg acccttggag ccgccgccat
     7561 tggagtcgcg gcggcgtcgg atcaccagga tacgcccgag gtcgagctga acgcactgtc
     7621 ggacatgacc gacgtgtacg cctttcccag cccgacggcc gggcggatcg tgctggtgat
     7681 gaacagccgt gccttcctca ctccggccca gagcccgagc gccgggttcg accgcaacct
     7741 gctttaccag ttcaagatcg ataacaccgg tgacgcggtc gaggaccggg tcatccaggt
     7801 gacgttcagc ggcagcggcg ccgaccagca ggtgcaggtt cgggggccga tggcgccagg
     7861 cgtgatcggc gcgatgaaca acgaagtcgc ctcgactccg cccgcgctgt cgggccggat
     7921 cggcaccgcg ctgggcagca ccggcggcct gcaggtgttc gccggtccgc gggacgatcc
     7981 gttcttcatc gatctggaac agttcttccg cattgtgccc gaccgcaagc cggtcaccgg
     8041 ccagctgtct cagctgccgg atcagcccag cgcgagcgcg ttccgggcgg cgggccaggc
     8101 cgtgaactat gtcgccggat tcaacgtgct gtccatcatc atcgagctgc cggtctccga
     8161 tctcacgacg ggcggcaacc ccaggatcgg tatctggggc accatcagcc gctgaaccac
     8221 ccattcgagg agaccatcgc catgaagact ctcgtactcc ctgcactgct actgctcccg
     8281 ctgctggcgg gctgcagtga tgacgacaac gacgtgacgg ggcccgacgg ggccaggatg
     8341 taccaccagg tccaacgcct ggggaacccg ctggtgagcg aggtatttct cgccaagcgg
     8401 agtcatccga cccacggcgc caccggtcca gcacaggacg tggcccagat cggggccgaa
     8461 ctccggaact tcgtgctgac cgtcgccggc cggaaccaga cggtcgccaa taccctccag
     8521 gccgtgctgc tgcccgacat gctgatcgtg cagaccaaca aagcccccgg cagcgcgggc
     8581 tggctcagct gggccctggc cgacggctgg ggcggtcgca cgctggccga tgacgtcgtg
     8641 gacgcggggc tcatggcagt gttcggcccg ctgctcgatc ccgacaacgt gtcgccaggc
     8701 ctggccacgg acaacgtggc gagcgactct caattccagg cgacgttccc gtatctcggg
     8761 aacccgaact gatgccgtca cgggtcacac aggctctggg cttcctcggc gcggtcgcga
     8821 ccctcggcgt gctggtcatc ccgatcgagg ggggagagcc cacgcctctc gtctcccctc
     8881 tcccgcctcc cggggatgtg cgcgaggccg acatccggtt ctaccaagcc agggtgacca
     8941 ccgacccgat cggcgccctg gatcggatgc ggctgggtgc actgctgctg gatcgggctc
     9001 gcgcttccgg ggaagcgcgg gacctgattc gggcggagga gctggcgcgg gaatcgatcg
     9061 ccttgcgaca ggcccacaat gccgctgcct ggcatctgct ggccgcggcg ctgctgggtc
     9121 agcaccgatt cctggaagcc ctcgaggtgg cggaacgcct ggtagcgatg aatcccgagg
     9181 ccacgggggc tcgagccctg cgcggcgaaa tcctgctgga gctgggacgc tatccggccg
     9241 cggattcggt gttcgcgggt ctcggtctgc agcgctacca gcctaacgtg gcgccccgct
     9301 atgcccggtg gctcgagctg cggggacgct cgggcggcgc ccggcggttg ctggaacggg
     9361 cccgcgtgga cgcggtccgg aacggattgc ccgatgatca gatcgcctgg taccatctgc
     9421 gcctggggga gctggccctg cggcacggac gtcaccgcca ggcccgaggg tggctcgagt
     9481 ccggtttggc gatccgtccc gccgactgga gattgctcgc ggtccgggcc cggctggcgc
     9541 tggcggaagg cgatggccag ctggcgattg cactgggtga ctcttcgctc tcgctgcact
     9601 tcgatccggc cacgttggcg ctgatgggtg atgcctgggc ccgggaggga gagccctcga
     9661 gggccgaggc gttcttccgt gggttggaga cggccgccgg cagcgcgccg cggggcggtt
     9721 accaccgggc ctggtacctc gccctgctgg atcatcagcg tcaggtacct ttggtattgg
     9781 cccaggtcac tcgcgatctg gagacccgcc aggatatcta cggttgggat ctgctggcgt
     9841 gggccctcca tcagagcggt cgccgggccg aggcccgggc cgccatgtcg ctggcgcttc
     9901 agtggggaac cgatgacccc gatctccggc gccacacgcg cgcgatcgag gcatccccat
     9961 gacgggcctg gtggggtacg tggggctggg gttccggcac atcgccgact tcgcggcgat
    10021 ggatcacctg ctctttctgg tcgcgctggt cgcgccttac cgggtgcggg attggcgtca
    10081 cctgttgctg gtagccagcg cctttacggt ggggcattcg ctgacgttgg ccctggcggt
    10141 gaccgacgtg gtgcggcttc ccaccgcgct gatcgagttt ctgatcccgg tcactatcat
    10201 cctggccgcg gccggg
//
LOCUS       DASWKS010000498         2877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_265065, whole genome shotgun sequence.
ACCESSION   DASWKS010000498 DASWKS010000000
VERSION     DASWKS010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265065"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..559)
                     /locus_tag="VGA78_14115"
     CDS             complement(11..559)
                     /locus_tag="VGA78_14115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895062.1"
                     /translation="MYAGHFAAGLVLKARVPQAPTWGLLIGVGLLDLLFGPLVLARVE
                     RVTITPGVSPGFSLDYIDWSHSLLMSVVWSLLYAALFLRRGRVVALAMGVAVFSHFLL
                     DLVMHPADLALWPSAPIHLGFGLWQSLPTGWWLVELAVVLLGLGYYWRRSRFDHSFGR
                     HATTAVLVVLGLHLFNSPWLMR"
     gene            complement(661..>2877)
                     /locus_tag="VGA78_14120"
     CDS             complement(661..>2877)
                     /locus_tag="VGA78_14120"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9895063.1"
                     /translation="LVLQAFEGTLRQGMDYALEYRIVWPAGTVRWIEGRGRLFRDTGG
                     APARMIAVCIDITDRKQAETAFLESEQRFGGFMQHLPGLAWIKDVAGRYVYANDAAVR
                     AFDVSRQDLYGKTDEEIFPPERAAEFRHNDRLALQSPAGYQAVETLLQYDGILHYSVV
                     NKFHVPAPDGRSGVIGGIAIDITEHKRAEAELQKQNVRLMLLGEAASVLLASDTAGEM
                     LGRLFRVISAHLGLDTYANYLLNDAADGLQLASCGGFSEAEADQFRTLKLGESISGTV
                     ALERRPIEASHVQESDLPRDQKAKRSGIRAYVCHPLLTEGRLIGTLAFGSRSRDRFPA
                     DDLAFLRTISRYVTVASERLGLIEQLRDADRRKDEFLATLAHELRNPLAPIRNALHIQ
                     RLAEGNRPAVEQARAVMERQLEHLVRLIDDLLDVSRITRGKLELRIERVELTVAVQSA
                     VEANRSLIQTNQHQLIISLPSEPLHLEADLTRLSQIFQNLLHNAVKYTPPGGKIWLTA
                     TRETGEVIVRIRDTGVGIPAGMLGHVFEMFAQLDGSLERSQEGGLGIGLTLVKRLVEM
                     HGGSVEARSEGVGLGSEFVVRLPVARRHTVEMAPQNGTSLRAPVPRRILVADDNRESA
                     ESLGLMLELMGNEVHIAHDGLETIALAEQVRPDVAVIDIGMPKLNGYDAARRMRSHSW
                     GGDILLIALTGWGQQSDKLRSAEAGFDHHLVKPVDPAELERLLALEPRGGHPAERV"
BASE COUNT          497 a          983 c          957 g          440 t
ORIGIN      
        1 tccggccgcg ctaccgcatc agccagggcg agttgaaaag gtgcaggccc aggactacca
       61 ggacggccgt cgtggcatgt cggccgaagg agtgatcgaa gcgggagcgg cgccagtagt
      121 atcccaaccc cagcaatacc acagcgagct ccaccaacca ccacccggtc ggcaggctct
      181 gccagagccc gaaccccaga tggatcggcg cgctgggcca gagcgccaga tcggcggggt
      241 gcatcaccag atccagcagg aagtgggaga acaccgcgac tcccatggcc agagccacca
      301 cccggccccg gcgcagaaac agcgcggcgt acaacaggga ccagacgacc gacatcagca
      361 aggagtgcga ccagtcgatg tagtcaaggg agaaaccggg cgaaacgccg ggcgtgatcg
      421 tcaccctttc caccctggcc aggaccaggg ggccgaacag gaggtcgagc aggccaaccc
      481 cgatcagcaa tccccaggtg ggggcctggg gcacccgggc cttgagcacc agaccggcgg
      541 cgaaatgccc ggcgtacacc ggctacttcc ccggcccgcg tccgccgcgg tccagccagt
      601 tgagaatcgg gaccggaacc agaaaggcca gaaagacgaa cagcgccagg ccggtgaccg
      661 tcacacccgc tcggccgggt ggccgccccg cggttccaac gccagcagcc gttccagctc
      721 ggccgggtcg accggcttga cgaggtggtg gtcgaagccg gcttcggcgg atcgcagctt
      781 gtcgctttgc tgtccccaac cggtgagcgc gatcagcagg atgtcgccgc cccaggaatg
      841 gctgcgcatc cggcgggcag catcgtatcc gttgagcttg ggcatgccga tgtcgatgac
      901 cgccacgtcg ggccggacct gttccgccag cgcgatggtc tccaggccgt cgtgcgcgat
      961 gtgcacctcg ttgcccatga gctcgagcat gaggcccagg ctttcggccg actcccggtt
     1021 atcgtcggcc acgaggatgc ggcgtgggac cggcgcccgc agactggtgc cgttctgggg
     1081 cgccatctcc accgtgtgcc ggcgtgccac cggcagccgg accacgaact cactgccgag
     1141 tccgaccccc tcgctgcggg cttcgacgct gcctccgtgc atttccacca gccgtttgac
     1201 cagggtcagg ccgatgccca ggccaccttc ctgggagcgc tccaggctgc catcgagctg
     1261 ggcgaacatc tcgaagacgt gtcccagcat gcccgccgga atgcccaccc cggtatcccg
     1321 gattcgcacg atgacctcac ccgtttcccg ggtggccgtc agccagatct tgccgcccgg
     1381 cggcgtgtac ttgacggcat tgtggagcag gttctggaag atctgggaca gccgggtcag
     1441 gtccgcttcg agatgcagcg gctcggacgg cagggaaatg atgagctgat gctgattggt
     1501 ctggatcagg gaccggttgg cctccaccgc gctctggacc gcgacggtga gctccacccg
     1561 ctcgatccga agctccagct tgccgcgggt gatccgggac acgtccagca ggtcatcgat
     1621 caagcggacc aggtgctcca gctgccgctc catcaccgcc cgcgcctgct cgaccgcagg
     1681 gcgattgccc tccgccagcc gctggatgtg caaggcgttc cggatcgggg cgagggggtt
     1741 gcggagctcg tgggccagcg tggcgaggaa ctcgtccttg cgccggtcgg catcacgcag
     1801 ctgctcgatc aggcccaagc gctcggaggc caccgtgaca taccgggaga tggtgcgaag
     1861 gaacgccaga tcatcagccg gaaaccgatc ccggctgcgg ctgccgaagg ccagcgtccc
     1921 gatcaaccgg ccctcggtca gcaagggatg gcagacatag gcccggatgc cggagcgctt
     1981 ggccttctga tcacggggca ggtccgactc ctgcacgtgg gaggcctcga tggggcggcg
     2041 ttccagcgcg acggttcccg agattgactc gcccagtttc agggtgcgga attggtccgc
     2101 ctccgcctcg gaaaaaccgc cgcacgacgc cagctgcagg ccgtccgccg cgtcattcag
     2161 gaggtagttg gcgtaggtgt ccagtcccag gtgggcgctg atgacccgga acagccggcc
     2221 cagcatctcg ccggcggtgt ccgaggccag cagcacgctg gcggcctcac ccaggagcat
     2281 gagcctcaca ttctgcttct gcagctcggc ctcggcccgc ttgtgctccg tgatatcgat
     2341 cgcgatgccg ccgatgaccc cggacctgcc atccggggcg ggaacgtgga acttgttcac
     2401 caccgagtag tgcaggatcc cgtcgtattg cagcaaggtc tcgaccgcct ggtagccggc
     2461 gggactctgc agggccagtc ggtcgttgtg gcggaactcg gccgcccgct ccggcggaaa
     2521 gatctcctca tcggttttgc cgtagaggtc ctggcgggaa acgtcgaatg ccctcacggc
     2581 cgcgtcgttg gcgtagacgt agcgtcccgc cacgtccttg atccaggcca gccccgggag
     2641 gtgctgcatg aagccgccga agcgctgctc gctctccagg aaggctgttt cggcctgctt
     2701 gcgatcggtg atgtcgatgc agaccgcgat catccgggcg ggcgcccccc cggtatcgcg
     2761 gaacaaccgg ccccgccctt cgatccagcg gacggtgccg gccggccaga cgatgcggta
     2821 ttcgagcgcg tagtccatgc cctggcgcaa ggtcccttcg aaggcctgca acaccag
//
LOCUS       DASWKS010000499         7688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1372221, whole genome shotgun sequence.
ACCESSION   DASWKS010000499 DASWKS010000000
VERSION     DASWKS010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7688
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372221"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VGA78_14125"
     CDS             complement(<1..953)
                     /locus_tag="VGA78_14125"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX9895064.1"
                     /translation="MPVTTLLTAGMVFLAVALGTIAIALLLEWGRERLRARGVVKQLR
                     EFSEQSFNAETQDLVRKTAASSWLGEAAAQLPQMRDFGRVLREAGSKWTVESFLLVCL
                     GIAAAAGLGFGLATGSVLGAVLGVAVGGFAPYGIVRFRATHRQRKLEEQLPDAIDLMG
                     RAMRAGHPLSAGFKMVADEAAEPMASEFRQVFEEQRFGLPLDDSLLSLSERVKLSDMR
                     ILVTAILIHRQVGGNLAEVLDNIAALVRERFKLRRQLRVITAQGRISGYVLGGMPVVL
                     GIALYTLNPGYMMPIFTEEIGRYMLAGALVFQVLGYLWIRR"
     gene            complement(960..2360)
                     /locus_tag="VGA78_14130"
     CDS             complement(960..2360)
                     /locus_tag="VGA78_14130"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX9895065.1"
                     /translation="MAEPRRTPLPWETSTEAPVRAPGGPAPAPDRSADSAAHQFALLK
                     GRIHRRLLERLNLANLEKTDRETVVEAIRRVVHELLTQEKVPLNFDEREGLVSQILDE
                     IFGLGPIQPLMNDPEVSDILVNTWQQVFIERHGKLETTDIQFQDDRHLLQVIDRIVSA
                     VGRRIDDSSPMVDARLPDGSRVNAIIRPLALDGAHLSIRKFKRDALTGEDLLRLESLN
                     EPMLELLRGVVRARLNVLVSGGTGSGKTTLLNILSGFIPVDERIVTIEDSAELQLRQP
                     HVVRLETRPPNIEGEGAVPQRMLLINALRMRPDRIIMGEVRGAESVDMLQAMNTGHDG
                     SLTTLHANTPRDALSRLETMISMASLNLADKAMRQQIASAIHVVVQTARLSDGTRKIV
                     QIAEITGMEGDVVTMQDIFAFDRAGMGEGGKVLGHFRATGIRPKFVDKFRAFGISLPA
                     GLFDSLAEALPLRARR"
     gene            complement(2353..3606)
                     /locus_tag="VGA78_14135"
     CDS             complement(2353..3606)
                     /locus_tag="VGA78_14135"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9895066.1"
                     /translation="MPRHRSLRAVLISQDPRVRETITGVTRNHGGALSLVLELDVALP
                     AFTGAQFKAVEQTSPAVVFVDFAASPDLGISLIGDLARAADQKLVPVGIGEALSSDLL
                     LRAMRAGLAEYLIKPLTPAAVSEAVDRLGSRLQLEEEEDRVMARTLAFFSAKGGSGSS
                     TVVANLAIELSKLTSKRVLVVDLDAELGEISLIFGIQPQFNLIDLVQNFHRMDSELLG
                     SYIEKHGSGVHVLSAPFHPERASGMTPEAVRQVLSYLRGLYDYVLLDTSKSFSPETLA
                     AFEQCDEVFLVATVDLPSLRNIQRGLPMLRRVMPRGLDQVHLIINRYDPRIEISLKDV
                     ERTLDLKVYATVANDYESVMRSINAGKPLVITSAKSPAARDLHAIASRIAAVGRTEPA
                     DPGPGLLTRMFRVTKPEPAKGGKRG"
     gene            complement(3619..4878)
                     /locus_tag="VGA78_14140"
     CDS             complement(3619..4878)
                     /locus_tag="VGA78_14140"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HEX9895067.1"
                     /translation="MRRSVLNKRGSVIVLVAVSLVALMGMAALAIDLGMLRKVKAEAQ
                     RAADAASLAGAAAFLYDMSMADKVNSAHSWAQQAADTNYMHGEKIDTTTEITVTVIPD
                     SAKVRVKVRRAAIGVWFAKIFGINSLPVGAVAAAEASDLGSGAAACVKPFALPDMWQD
                     TQDGNGGIANRLPDGTEEWLWNTGVDTYAAAHTPTEGLGTGLGSDWRNTTNPFERDWG
                     RQIVMRPSVSEGNPSQPCPGDLQGNKCYVPGWWGLWGGNNPDMRDKILGCDGTETELD
                     TTVEVETGWRQTLNTAVETVYNRDPEARWDPNATSPFPNKVGSVVGSNLGPPTSTAWM
                     ESDRVWIMAMVDPDDIPPDPSDHDTEFNNFMVFFFEGCIDESGIGTPGMPCGAQSMLV
                     GRFLGKVAGSGTGPTTGTLLTHIRLVE"
     gene            complement(4919..6250)
                     /locus_tag="VGA78_14145"
     CDS             complement(4919..6250)
                     /locus_tag="VGA78_14145"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX9895068.1"
                     /translation="MSLRHRVILAALLVGVMLPPALAAQTVLQRPAQALSLPRGTSLL
                     LTNPSGVGRVTTGDPAIAEILVVSPTELLINGRGLGSTTMIIWEPGNVNPRVYALEVT
                     IDTPALERYLRQALPGETITVNASGNSVTLSGNVQDPFAVDRALEIARATGVASVVNN
                     LISPPAVQIMLKVRFAEINRSNLKDWASALQALNPQELDSDGDWFGQTISDGLIRILL
                     TNPNANAQALINASFTKGILRSLAEPNLLTLPGKEASFLAGGEFPYPTVQGATAGGVG
                     QQAITITFREFGVRLKFTPNLTQSGAIRLKVAPEVSTLDFANGLTISGFEIPSILIRK
                     AETEVELRPGQYLALAGLIDNGTIENVSKIPLLGDIPILGHLFKSTQYRARQTELLVL
                     VTPVLVQASEVAQPLPTGEPITWKWPGWMRRELQSQPQRWGTPPGPATQRP"
     gene            complement(6247..7152)
                     /gene="cpaB"
                     /locus_tag="VGA78_14150"
     CDS             complement(6247..7152)
                     /gene="cpaB"
                     /locus_tag="VGA78_14150"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX9895069.1"
                     /translation="MAVRTRSLVLLFLALASGGAAAWLSLGYLRRQTQPLLSAGSVSG
                     KAVVAAKDLPVGTVVTENDVRLVDWPGNALPPGLISSPQDAIGRGVLSGVRLNEPFLE
                     TKLAPRGTGGGMPVLITDKMRAMSIRVDDVIGVAGFVLPGTRVDVLLTVPGAPVASEP
                     TTKALLQNIQALAAAQSFQVDAQGKAQPVPVVTLLVTPEQAETLAMAAHQGRIQLTMR
                     NILDTTLIRTTGARASSLFGPGRPVQGPLVQGYRRVPSVSAPRQSANEETIIEQFRGG
                     ERSLIRFSRPRQPDRDTAPETRENR"
     gene            complement(7176..>7688)
                     /locus_tag="VGA78_14155"
     CDS             complement(7176..>7688)
                     /locus_tag="VGA78_14155"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX9895070.1"
                     /translation="LWSWSWAGSHCVVALGRMQDHMKPKVGGLRGTQGQALVELALLL
                     PFLMLLLLGVLEISRAWQHKQTLTDVAREGARLSVIDNALVTKDSTTALIKSMIANAA
                     FDSSTVTIVWPLGCRWTGVCTPLIGRGEITAVELTQQHQFVAIHRLVQLATNGSGQMT
                     LRTTSRMRVE"
BASE COUNT         1314 a         2544 c         2476 g         1354 t
ORIGIN      
        1 attctacgga tccagaggta acccaatacc tgaaacacca gagcacctgc cagcatgtac
       61 cgcccgatct cctccgtgaa gatcggcatc atgtacccgg ggttgagggt atagagcgcg
      121 atcccgagca cgaccggcat cccgcccagg acgtagccgg agatccggcc ctgggcggtg
      181 atgaccctga gctggcgccg gagcttgaac cgctcccgga ccagcgcggc gatgttgtcc
      241 agcacctcgg ccaggttgcc acccacctgg cggtggatca ggatcgcggt caccaggatc
      301 cgcatgtcgc tcagcttgac ccgctcgctc agactcagca gcgagtcgtc cagcggcaac
      361 ccgaagcgct gttcctcgaa gacctgccgg aactcggacg ccatcggctc ggcggcttcg
      421 tcggccacca tcttgaaccc cgcgctcagc ggatgccctg cccgcatggc ccggcccatg
      481 agatcgatgg catcgggaag ttgctcttcc agcttccttt gccggtgggt cgcccgaaac
      541 cgaacgatcc cgtagggagc gaacccgccc accgcgacgc ccaggacagc gcccagtacc
      601 gacccggtgg ccagtccgaa accaaggccc gccgcggccg cgatgccgag gcagaccagc
      661 aggaagcttt cgaccgtcca cttactgccg gcctcgcgca ggacccggcc gaagtcgcgc
      721 atctgcggca gttgggccgc agcctccccc agccatgagc tcgcagccgt cttccgcacc
      781 aggtcctggg tctcggcatt gaacgactgc tcgctgaact cccgcaactg cttgaccaca
      841 ccccgggccc ggagccgctc ccggccccac tccaggagga gggcaatggc gatggttccc
      901 agcgcgacgg ccaggaacac catcccggcg gtgagcagcg tagtgaccgg catgggagcc
      961 taccgtctgg cgcggagggg cagcgcttcc gccaggctgt cgaacagccc ggccgggagg
     1021 ctgatgccga aggccctgaa cttgtccacg aacttgggac ggatgccggt ggcgcggaaa
     1081 tgccccagca ccttcccgcc ttcacccatt ccggcccggt cgaaggcaaa gatgtcctgc
     1141 atggtgacca catcgccttc catgccggtg atctcggcga tctggacgat ctttcgagtg
     1201 ccgtcggaga gcctcgcggt ctgcaccacc acgtggatgg cgctggcgat ctgttgccgc
     1261 atggccttgt cggccaggtt gaggctggcc atggagatca tggtctcgag ccgggagagc
     1321 gcatcgcgcg gcgtattggc atgcagggtg gtgagcgagc cgtcgtgacc ggtgttcatg
     1381 gcttgcagca tgtcgaccga ctcggcgcct cgaacctcgc ccatgatgat ccggtcgggc
     1441 cgcatccgga gcgcgttgat cagcagcatc cgctggggca ccgcgccttc gccctcgatg
     1501 ttgggcgggc gggtctccag ccggaccacg tggggctggc gcagctgcaa ttcggccgag
     1561 tcctcgatgg tgacgatccg ctcgtcgacc gggatgaagc ccgaaaggat gttaagcagg
     1621 gtggtcttgc ccgagccggt gccgcccgag accagcacgt tgagccgggc ccggaccact
     1681 ccccgcagca gctccagcat cggctcattg agactttcca gccggagcag gtcttcaccg
     1741 gtcagcgcgt cccgcttgaa tttgcggatc gacaggtggg cgccgtccag ggccaggggc
     1801 cggatgatgg cgttgacccg cgagccgtcg ggcaggcggg cgtccaccat gggcgaggag
     1861 tcgtcgatcc ggcggcccac cgccgagacg atccggtcga tcacctggag caggtggcgg
     1921 tcgtcctgga actggatatc ggtcgtctcc agcttgccgt gccgctcgat gaacacctgc
     1981 tgccaggtat tgaccaggat gtccgacact tcgggatcgt tcatcagggg ctgaatcggt
     2041 cccagcccga agatctcgtc caggatctgg gagaccaggc cctcgcgctc gtcgaagttg
     2101 agcgggacct tctcctgggt cagcagctcg tgcaccaccc ggcggatggc ctcgactacg
     2161 gtctcccggt cggtcttttc caggttggcg aggttgagcc gttccagcag ccggcggtgg
     2221 attcgcccct tgagcagggc gaactggtgg gcggccgaat cggcggagcg gtcgggcgcc
     2281 ggggccggcc cgcccggggc ccgcaccggg gcttcggtgc tggtttccca gggcaacggg
     2341 gttcgtctgg gctcagccac gtttgcctcc cttggcaggc tcgggcttgg tcacccggaa
     2401 catccgggtc aacaggcccg ggccggggtc ggccggttcg gtccggccga cggcggcgat
     2461 ccggctggcg atagcatgca ggtcccgggc cgccggagat ttggccgacg ttatgacgag
     2521 cggttttccg gcattgatgg agcgcatcac cgactcgtag tcgttggcca cggtagcgta
     2581 gaccttgagg tccagggtac gctccacgtc cttgagcgag atctcgatcc tgggatcgta
     2641 ccggttgatg atcaggtgca cctgatccag accccggggc atcacccgcc ggagcatggg
     2701 aagtccgcgc tggatgttgc ggaggctcgg caagtcgacc gtggccacca ggaacacctc
     2761 gtcgcactgc tcgaaggcag ccagggtctc gggcgagaac gacttggagg tatccagcag
     2821 cacgtagtcg tacagccccc gcaggtacga gagcacctgc cgcaccgcct ccggggtcat
     2881 cccgctggcc cgctcggggt ggaacggggc tgacaacacg tgcacgccgg agccgtgctt
     2941 ttcgatgtat gaccccagca gctccgagtc catccggtgg aagttctgaa ccaggtcgat
     3001 caggttgaac tgaggctgga tcccgaagat cagggagatc tcccccagct cggcgtccag
     3061 atccaccacc agcacccgct tggacgtcag tttgctcagc tcgatggcca ggttggccac
     3121 cacggtcgag gagcccgagc cccccttggc gctgaagaac gccagggtcc gggccatgac
     3181 ccgatcttcc tcctcctcca gctgtagcct ggagccaagc cggtcgactg cctccgagac
     3241 cgccgccgga gtgagcggct tgatcaagta ctccgccagt cccgcccgca tcgcccgaag
     3301 cagcaggtcc gatgagagcg cctcaccgat tcccaccggg accagcttct gatcggcggc
     3361 ccgggccagg tcgccgatca gggagatgcc cagatcaggc gaggcggcga aatcgacaaa
     3421 gaccaccgcc ggggacgtct gctccaccgc cttgaattga gcgccggtga aggcgggtag
     3481 ggccacgtcc agctccagga ccagcgagag cgccccgccg tgattgcggg taacacccgt
     3541 gatggtttca cggactcggg gatcctggct gatcaggacc gcgcgaaggg agcgatgacg
     3601 tggcatcggg ctgggtgcct actccaccag ccggatgtgg gtgagcaatg tcccggtcgt
     3661 tggccccgtt cccgagcccg cgacttttcc gaggaatcgg ccaaccagca tgctctgggc
     3721 cccgcagggc atcccgggcg tccctattcc gctctcgtct atgcacccct cgaagaagaa
     3781 caccataaag ttgttgaact cggtgtcatg gtccgaggga tccggcggaa tgtcatccgg
     3841 gtccaccatc gccatgatcc agacccggtc gctctccatc caggcggtac tggtcggcgg
     3901 acccagattg gatccgacca cgctccccac cttgttggga aatgggctgg tggcgttcgg
     3961 gtcccagcgg gcttccggat cgcggttgta aaccgtctca accgcggtat tgagggtctg
     4021 gcgccacccg gtctcgactt cgacagtggt atccagctcg gtctccgtgc cgtcgcagcc
     4081 gaggatcttg tctctcatgt ctggattgtt gccgccccag aggccccacc agccgggcac
     4141 gtaacacttg ttgccctgga ggtcacccgg acagggctga gagggattac cttcgctgac
     4201 gctgggacgc atcacgatct gcctgcccca gtcccgctcg aacgggttag tcgtgtttct
     4261 ccaatcgctc cctaatccgg ttccgagtcc ctccgtcgga gtgtgcgcag cggcataggt
     4321 atcgaccccg gtgttccaga gccactcctc ggtgccgtca ggcaggcgat tggcgatgcc
     4381 accgttgccg tcctgggtat cctgccacat gtccggaagc gcgaacggct tgacgcaggc
     4441 cgcggcgccg ctccccaggt cggatgcttc ggccgccgcc accgccccga ccggcagact
     4501 gttgatcccg aagatcttgg cgaaccagac cccgatggcc gcccggcgga ccttgacccg
     4561 cactttggcg ctgtccggaa tgaccgtgac agttatctcg gtcgtggtgt cgatcttctc
     4621 accatgcatg tagttcgtat cggcggcctg ctgcgcccag gagtgggcgc tgttgacctt
     4681 gtcggccatc gacatatcgt agagaaatgc ggctgcccca gccagcgagg cggcatcggc
     4741 agctcgctgc gcttctgcct tgaccttcct aagcattcca agatcaatcg ccagggccgc
     4801 cattcccatc agggccacca gggacactgc gaccaacacg atcaccgaac cgcgtttgtt
     4861 gagcaccgac cggcgcataa ccacctccag gactgcctcc aactgcttcc ggactacctc
     4921 agggacgttg ggtcgcaggg ccgggcggag tgccccagcg ctgcggttga ctctgcaact
     4981 cgcgccgcat ccacccgggc catttccagg taatcggctc gccggtcgga agcggttgag
     5041 caacctcgct ggcctgcacc aggaccgggg tcaccagcac cagcagctcg gtctgccgag
     5101 cccggtactg agtggacttg aacagatgac caagaatcgg gatatctccc agcaacggga
     5161 tctttgacac gttctcgatg gtcccgttgt cgatcaggcc ggccagggcc aggtactgac
     5221 cgggacgcag ctcgacctcg gtctcggctt tccggatcag gatactagga atctcgaaac
     5281 ccgatatcgt gagaccgttg gcgaagtcga gggtcgagac ttcaggcgcg accttgaggc
     5341 gaatcgctcc gctttgggtg aggttggggg tgaacttcag ccggacaccg aattcgcgaa
     5401 acgtgatagt gatggcctgc tgcccgaccc ctcctgcggt agcaccctgc acggtcggat
     5461 acggaaactc gcctccggcg aggaagctgg cttccttgcc cgggagcgtg agcaggttgg
     5521 gttcggccag gctccttagg atacccttgg tgaacgaagc gttgatgagc gcctgggcgt
     5581 tggcgttggg gttggtcagc agaattctga tcaagccgtc ggaaatagtc tgcccgaacc
     5641 agtccccgtc ggaatcgagc tcctgcggat tcagggcctg gagcgccgag gcccagtctt
     5701 tcaggttgct ccggttgatc tcggcgaacc ggaccttgag catgatctga acggctggag
     5761 gagaaatgag attgttcacc actgacgcaa ccccggtagc ccgggcgatc tccagggcgc
     5821 ggtcgaccgc aaagggatcc tggacattgc ccgagagcgt caccgaattg ccgctggcat
     5881 tcaccgtgat cgtttcaccc ggcagggcct ggcgcaggta acgctccagg gcgggggtgt
     5941 cgatggtcac ctccagcgcg taaaccctgg ggttcacgtt ccccggctcc cagatgatca
     6001 tagtggtgga gcccaagccc cgcccgttga tcaagagctc ggtggggctc accaccagga
     6061 tctcggcgat cgccggatct ccggtcgtga ctctccctac accggacggg ttggtcagga
     6121 gcagggaggt acccctgggg agcgaaagcg cttgcgccgg ccgctgcagg accgtctgcg
     6181 ccgcgagagc gggtgggagc atcactccta ccagaagggc ggcgaggatc acgcggtggc
     6241 gaaggctcat cggttctccc gtgtctcggg ggcggtgtcg cggtcgggct gccggggccg
     6301 cgagaagcga atcaagctgc gctcgccccc gcggaactgt tcgatgatgg tctcttcgtt
     6361 ggcggattgc cggggcgcac tcaccgaggg cacccgccgg tagccctgca ccagaggtcc
     6421 ctgcaccggc cgcccgggcc cgaacagact gctcgcccgg gctcctgtgg tccgtatcag
     6481 ggtggtatcc agaatgttcc gcatagtgag ctggatccgg ccctggtgag ctgccatggc
     6541 caaagtttcg gcctgttccg gagtcaccag gagtgtcacc accggcaccg gctgggcctt
     6601 cccctgggca tccacctgga atgactgggc cgcggcaaga gcctggatgt tctgcaagag
     6661 ggccttggtg gtcggctccg acgccaccgg ggccccggga acggtaagca gcacgtccac
     6721 ccgggttccg ggcaatacga atccggcgac accgatcacg tcgtccaccc ggatgctcat
     6781 ggcccgcatc ttatcggtga tcaggaccgg catgccgccg ccggtaccgc gcggggccag
     6841 cttggtttcg agaaacggtt cgttgagccg gacgccactc agcacgcccc gcccgatggc
     6901 gtcctgaggg gatgaaatga gtcccggcgg cagggcgttg ccgggccagt ccaccaggcg
     6961 gacgtcgttc tcggtcacaa ctgtccctac cggcaggtct ttggccgcca ccacggcttt
     7021 cccgctgacg gagccggcgc tgaggagcgg ctgggtctgt cgacgcagat agccgaggga
     7081 gagccaggcc gcggctccgc ccgaagccag agcgaggaac agcagcacga gtgatcgggt
     7141 tcgaaccgcc atcagctaaa gacctcctgc ccgcgtcatt cgacccgcat ccgcgaggtt
     7201 gtgcggagcg tcatctgccc gctcccgttg gtcgccagtt gtaccagccg gtggatcgcc
     7261 acgaactgat gctgttgcgt cagttcgact gcggtgatct cgcctctccc aatcaacggc
     7321 gtacatacac cggtccagcg gcatccgaga ggccagacga tggtgaccgt gctggaatcg
     7381 aaggctgcat tggcgatcat cgacttgatc aacgcggtgg tgctgtcctt cgtcaccagt
     7441 gcgttgtcga tgaccgagag cctggctcct tccctcgcca catcggtcag cgtctgcttg
     7501 tgctgccagg cccggctgat ctccagcact cccagcaaca gcagcatcag gaacggcagc
     7561 aacagggcga gttcgaccag tgcctggcct tgcgtccctc tgagaccgcc aaccttgggt
     7621 ttcatatgat cctgcatcct tcccagagcc accacacaat ggctcccagc ccaagaccaa
     7681 ctccatag
//
LOCUS       DASWKS010000500         2884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1372365, whole genome shotgun sequence.
ACCESSION   DASWKS010000500 DASWKS010000000
VERSION     DASWKS010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372365"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2619)
                     /gene="clpB"
                     /locus_tag="VGA78_14160"
     CDS             complement(<1..2619)
                     /gene="clpB"
                     /locus_tag="VGA78_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEX9895071.1"
                     /translation="MIRPERLTIKAQEAFRDAGELARGRGNPVVNDAHLFAALLSQDE
                     GVVQPLLQKAGINVTALRESVERELAKFPVQSGGVEPTLSRELHRIFDLAEKEAKRLE
                     DAYVSTEHLLVGLAEEKGTTARGLLSALEVTADDLRAAMKDVRGAHRVTDTSPEDAYQ
                     ALERFTRNLTDQARAGKLDPVIGRDEEVRRVMQVLSRRTKNNPVLIGEPGVGKTAIVE
                     GLAQRIVNGDVPGSLRNRDIVALDIGQLLAGAKYRGEFEERLKAVIKELVEAEGRYIV
                     FIDEMHTLVGAGAAEGAVDASNMLKPALARGELHVVGATTLDEYRKHVEKDPALERRF
                     QPVFVGAPSVADTIAILRGLKEKYEVHHGVRITDNALVAAATLSDRYIGDRFLPDKAI
                     DLVDEAASRLRIEIDSLPQEIDEVERRIVQLEIQRQALLKEKDKAALERREAVEHEIS
                     ELRERSAGMKAQWQSEKEAIQHIQTRKAELESLRGEVDRATRKGDLQRAAELRYGRIP
                     DLERQIAVDEVRLADVQKNAKYLREEVDAEDIAEIVAKWTGIPVSKMMESDRERLTRL
                     EEELHHRVVGQEEAVAAVANAVRRSRAGLQDPNRPTGSFIFLGPTGVGKTETARALAQ
                     FLFDDERAMVRLDMSEYMEKHSVARMIGAPPGYVGFEEGGQLTEAVRRRPYSVVLFDE
                     IEKAHPDVFNVLLQILDEGRLTDSQGRTVDCRNTVIIMTSNVGSAHILEWAGQADRRA
                     GGLGLAGWEQVAERVKGELRLHFRPEFLNRVDDIVVFRPLSRDDLGRIVELQLEHLRR
                     LLGGRKIALEVTPEAKRLVADLGYDPVYGARPLKRVIQNRIQNPVALELLEGRFSEGD
                     TIRVEALDGSLSFAKTS"
BASE COUNT          431 a         1020 c          881 g          552 t
ORIGIN      
        1 cgaggtcttg gcgaaggaaa gactcccatc cagcgcctcc acccggatgg tatccccttc
       61 gctgaaccgc ccttcgagca gctccagcgc cacgggattc tggattcggt tctggatgac
      121 ccgcttgagc ggccgtgcac cgtagacggg gtcgtatccc agatcagcga ccagccgctt
      181 cgcctccggc gtcacctcca gcgcgatctt ccggcctccg agcagccggc gcaggtgctc
      241 cagctgcagc tcgacgatgc ggcccaggtc gtcccgcgac agaggacgga agaccacgat
      301 gtcatccacc cggttgagaa actcgggccg gaagtggagc ctcagttccc ctttgactcg
      361 ctccgccacc tgttcccagc ccgccagccc tagccccccc gcccgccggt ccgcctgccc
      421 ggcccattcc agaatgtgcg ccgaccccac gttggacgtc atgatgatca cggtgttgcg
      481 gcaatccacc gtgcggccct gactgtcggt cagacggcct tcgtccagaa tctgcagcaa
      541 cacattgaac acgtcggggt gcgccttctc gatctcgtcg aacagcacca cgctgtaggg
      601 ccggcgccgg acggcttcgg tgagctggcc gccctcctcg aaacccacat agccgggcgg
      661 ggccccgatc atgcgcgcga ccgagtgctt ctccatgtat tccgacatgt cgagccgcac
      721 catggcgcgc tcgtcgtcga agaggaactg ggccagcgcc cgggcggtct cggtcttgcc
      781 cacgccggtg gggcccagga aaatgaagga accggtgggg cgattggggt cctgcagacc
      841 ggcccggctg cgtcgaaccg cattggccac cgccgccacc gcctcctcct gccccaccac
      901 ccggtgatgc aactcttcct ccagccgggt gagccgctcc cggtcggact ccatcatctt
      961 gctgaccgga atcccggtcc acttggccac gatctcggcg atgtcctcgg cgtcgacctc
     1021 ctcgcgcagg tacttggcgt tcttctgcac atcggccagc cggacctcgt ccaccgcgat
     1081 ctgccgttcc agatcgggga tccgtccgta gcgcagctcc gccgcccgct gcagatcgcc
     1141 cttccgggtc gcccgatcca cctcgccgcg gagcgattcg agctcggcct tgcgggtctg
     1201 gatgtgctga atggcctcct tctccgattg ccattgggcc ttcatcccgg ccgagcgttc
     1261 ccggagctcc gagatctcgt gttcgaccgc ctcgcgccgc tccaacgccg ccttgtcctt
     1321 ctccttgagc aacgcctgcc gctggatctc gagctggacg atgcgccgtt ccacttcgtc
     1381 gatttcctgg ggcagcgagt cgatctcgat ccgaagccgg ctggccgcct cgtccaccag
     1441 gtcgatggcc ttgtcgggca ggaaccggtc accgatgtag cggtcggaga gggtggcggc
     1501 ggccaccagc gcgttgtcgg tgatccgcac cccgtgatgt acctcgtatt tctccttgag
     1561 ccctcggaga atggcgatgg tgtccgcgac gctgggcgcg cccacgaaga ccggctgaaa
     1621 acggcgctcg agcgccgggt ccttctcgac gtgcttgcgg tattcatcga gcgtggtggc
     1681 gcccaccacg tgcagctcgc cccgggccag ggccggcttg agcatgttgc tggcatcgac
     1741 cgcgccttcg gccgcccccg cgcccaccag ggtgtgcatc tcgtcgatga atacgatgta
     1801 gcggccttcg gcctcgacca gctccttgat caccgccttg aggcgctcct cgaactcgcc
     1861 ccggtacttg gcgccggcca gaagctggcc gatgtccagg gccacgatgt cccggttccg
     1921 gagcgagccc ggcacgtcgc cgttcacgat tcgctgagcc agtccctcca cgatggcggt
     1981 tttcccgacg ccgggctcgc cgatcaggac cggattgttc ttggtacgcc gggacaggac
     2041 ctgcatcacc cggcggacct cctcatcccg tccgatcacc gggtcgagct taccggctcg
     2101 ggcctggtcg gtcaggttgc gggtgaagcg ctccagcgcc tggtaggcgt cttccgggct
     2161 ggtgtcggta acccggtgag cgccccggac atccttcatt gccgcccgga ggtcgtcggc
     2221 cgtgacctcg agggcggaga gcagcccccg ggcggtcgtc cccttctcct ccgccaagcc
     2281 caccaggagg tgctcggtcg agacataggc gtcctcgaga cgtttcgcct ccttctccgc
     2341 cagatcgaag atccggtgca gctcccggct cagcgtgggc tcgacccctc cgctctgaac
     2401 cgggaacttg gcgagctccc gctcgaccga ttcccgcagc gcggtgacgt tgatgccggc
     2461 cttctggagc aggggctgga cgaccccttc gtcctgagac agcagggccg cgaagagatg
     2521 ggcgtcgttg accaccggat tgccccggcc gcgggcgagc tcgccggcgt cgcggaaggc
     2581 ttcctgggct ttgatcgtca gtcgttcggg gcgaatcatc gtcaactgcc tttagcgatt
     2641 cagcgatttc gcggtttagc ggtggcgtaa tacctagctt caatcaaaac gtgcaactcg
     2701 ttgctcttgt ggttattacg acttggcaac tcatgtaccg caaaaaggcg tcattctggc
     2761 agatgttagc gtgggggtat ccagaatcgg cccgaaagat ccgaaagccg gtcaattttt
     2821 cagtcttcgc accccgtttt ggtcgcgcca ggtgatcccc tttctgtcgg cccattcgag
     2881 caga
//
LOCUS       DASWKS010000501         7059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_636580, whole genome shotgun sequence.
ACCESSION   DASWKS010000501 DASWKS010000000
VERSION     DASWKS010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636580"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1528
                     /locus_tag="VGA78_14165"
     CDS             <1..1528
                     /locus_tag="VGA78_14165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895072.1"
                     /translation="VSPPPPVVGRIELTRRNIFADSEATFFVPRLVNRFHVTTRPYVI
                     ERELLFERGQALRSDALEETARNLRRLGVFRQVVVDTVRRGATLVALVETQDGWSTKP
                     ELSFRSTGGQTAWRASLFEENLFGTASRLMMGYQKDPDRSAASFGFRQPRLFANSIGI
                     GGLVEDRSDGTILNGFVLRPFLSFHDRYGWHAGFDVRDERVLRYFEGEPFPRDTLFRN
                     YDAAGVSFGRAMKVEGRVYHRAAINGRVWRDDYTTPDSATTGPRVAQGSIEVGWEFRR
                     SRYVVVRGFTASREEDVDLSTSVRASLGLTPKAFGHDQDGFLAGLGFRYAGVLQSERA
                     FAYVDLIAGGRFTSVGLDSGSVNTGATVWFTPYDKASLVAHLGAGWLHNPRPGGEFDL
                     GLGQGPRGYRLHAFSGDRAVNATLEYRYLAFRDLIKVIDLGLALFTDWGGAWYAGSRH
                     RTGWDGGIGLRLGPSRSTDVLLSRIDLVYRGRTDRDAPGWLVVIGRGLTFSTASLLTN
                     "
     gene            1559..1993
                     /locus_tag="VGA78_14170"
     CDS             1559..1993
                     /locus_tag="VGA78_14170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEX9895073.1"
                     /translation="MRYPALFLPHPCYVSFAGSCHLALMARYQELKVWQLAHQLAREV
                     RAIVRRFPAEERFELASQLRRAVLSVPTNIVEGSGLRGPRGFLRHIRIAIGSLREVTY
                     LLLYAKDDGYITESKYRDLEDQTRHVRILLHRLAKALERATQ"
     gene            complement(2065..2511)
                     /locus_tag="VGA78_14175"
     CDS             complement(2065..2511)
                     /locus_tag="VGA78_14175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895074.1"
                     /translation="MTVPPSDDAAPESPGPDEPPLEAAPVRKKRKWKRYVAIALLSPL
                     LALLFYTVVVYNWAYSEGDRSGILRKFSRKGWLCKTWEGELAMTTVPGVMPEAWNFTV
                     RDDSVAHAVNAALGQQVVLHYSEHRGLWSRCFGETPYFVNAVRLVP"
     gene            complement(2600..3508)
                     /gene="rocF"
                     /locus_tag="VGA78_14180"
     CDS             complement(2600..3508)
                     /gene="rocF"
                     /locus_tag="VGA78_14180"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004053 - arginase activity [Evidence
                     IEA];
                     GO_process: GO:0019547 - arginine catabolic process to
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HEX9895075.1"
                     /translation="MGKIRIIGVPLDLGQSRRGVDMGPSALRIANLAPRLSELGHEVQ
                     NLGNLDAPERDTLPETSQAIDFLPAIATVCQRLAVYTAQAIREGYMPLVLGGDHSVAA
                     GSAAGVATALAERNQRLGLVWLDAHGDMNTPESTRSGNVHGMPVAHLLGHGDALLAGI
                     AQPGPAVRAENLVVVGARDLDPAERDHARAWGVRIFTMRDIDERGMRAVMSDAIALAS
                     NGTAGLHVSVDADFVDPAEAPGVGTPVRGGVTYREAHLAMELLHDSHQMLSLDIVEIN
                     PVLDSHNMTAELCVGLARSAFGLRIL"
     gene            3611..5368
                     /locus_tag="VGA78_14185"
     CDS             3611..5368
                     /locus_tag="VGA78_14185"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX9895076.1"
                     /translation="MNVGATPTRLMRLLELARTFSTLEATSSRLKLVELVAELLARAR
                     PEELEPVVYLLLGTLRPPWEGVETGIGEKLLQSTLARVYGKTTDQVRRRMAKAGDMGL
                     VAESLASAARSRVTVRQAYQVLLEVAAAAGSGALGRKTTLLADLLGKLTGLEARYLVR
                     AAQGSLRLGVGDQTVLEAAALGALGDRGKKPLLEHAYNVRADLGDVVRVAFTQGASGL
                     ARIGPALGVPVRPALAQRLASAAEIVQRLGPVQGEPKFDGFRLQLHRRGQRVWAFSRR
                     LENVTAMFPELVDGIRRQLKAERVILEGEALVHNPETGEFLPFQVTMTRKRKSRVAES
                     AERYPLRLFAFDLLYLGQQGWLDRPQRERTRRLRQLVSVRGDGPIAVPDTIETADPEE
                     LQAYFDDMINRGLEGIMAKRPDAAYQAGARGYHWVKLKRAYHSHLRDTVDLVLVGYLR
                     GRGKRAALGIGSLLAAVYDPKRDRFRTVAKIGAGLSERGWRELRASLDRAATRTRPRR
                     VDALITPDVWVEPRHVVEVLADEITRSPSHTCGRSGDAPGYALRFPRMLGLRPDKAPD
                     DTTTEREILDLYRKQRQTK"
     gene            5516..6808
                     /locus_tag="VGA78_14190"
     CDS             5516..6808
                     /locus_tag="VGA78_14190"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX9895077.1"
                     /translation="MRAVAGITLGIAAGMLILRQQPAWSQPVLSVADALVRAWTNAFR
                     VLVVPLVLAQLYMAVGVGRTSKAVVGRLGLATPLVFAGLMAVTALFSTGLIIWLMSLP
                     SLAGLSLPQPGNNSVAGAAQIAEQATGSWVDGFIPPDLFGANHLLPLMIFTVGFGLAA
                     RRLPAAMQETLLAGFGAVRAAMFILVEWLLVATPVVLFGLGLTSAALSGARIGGALLA
                     FTGVESLVLVAALLLLYPLTTLLGGVSWRWLVRALMPAQFTAAATRSSLATIPALLAS
                     AETGPGQARVFASYVLPLGGAMLKLSRSVTSPVKLLFLSHLLNIPLSAEQVVIFAATV
                     ILISPATVGVPRVTPATRSLPAYVAAGIPAEYVLLLGAATAVTDVFQTLLNTTGYMSA
                     NVLIGRFAAPREVIAAAVTAPAPVGPQWAEGQPAGDSQ"
     gene            6878..6949
                     /locus_tag="VGA78_14195"
     tRNA            6878..6949
                     /locus_tag="VGA78_14195"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6910..6912,aa:Cys,seq:gca)
BASE COUNT         1069 a         2386 c         2369 g         1235 t
ORIGIN      
        1 cgtctcgccc ccgcctcccg tcgtcgggcg gatcgagctc acccggcgca acatcttcgc
       61 cgacagcgag gcgaccttct tcgttccccg gctggtgaac cgtttccacg tcaccacgcg
      121 gccgtacgtg atcgagcggg agctcttgtt cgagcggggc caggcgctgc gctcggacgc
      181 gctggaggag accgcccgca atctccggcg actgggagta ttccgccagg tggtggtgga
      241 tacggtgcgg cggggggcga cgctggtcgc cctggtggaa acccaggacg gatggagcac
      301 caagccggag ctcagttttc gcagcaccgg aggccagact gcctggcggg ccagcctgtt
      361 cgaagagaac ctcttcggca ccgcctctcg cctgatgatg ggataccaga aagaccccga
      421 ccggtcggcc gcctcgttcg gctttcggca gccgcggctc ttcgccaatt ccattggcat
      481 cggcgggctg gtcgaggatc gatcggatgg gaccatcctc aacggctttg tgctgcggcc
      541 cttcctgtcg ttccacgacc ggtatggctg gcacgcaggc ttcgacgttc gggacgagcg
      601 ggtgctgcgc tacttcgagg gcgagccgtt cccccgcgat accttgttcc gcaactacga
      661 cgcggccggg gtgagcttcg gccgcgccat gaaggtggag ggtcgggtct accaccgagc
      721 cgccatcaac ggccgggtgt ggcgggacga ttacaccacg cccgactccg ccactaccgg
      781 accccgggtg gcccagggat cgatcgaggt ggggtgggaa ttccgccgct cccgttacgt
      841 ggtggttcgc ggctttaccg ccagccggga agaggacgtc gacctgagca ccagcgtccg
      901 ggccagcctg ggtctgactc cgaaggcgtt cggtcacgac caggatggct ttcttgccgg
      961 actgggattc cgctacgccg gggtgctgca gtcggaacgc gccttcgcct atgtcgatct
     1021 catagcgggc gggcggttca cctcggtggg tctcgattcc ggatccgtca ataccggcgc
     1081 gaccgtgtgg ttcacgccct acgacaaggc cagcctggtg gcccacctgg gggcgggctg
     1141 gctccacaac ccccggcccg gcggcgaatt cgacctgggc ctggggcagg gccctcgggg
     1201 ctatcggctg cacgcgttca gcggtgatcg ggcggtgaat gccacgctcg agtatcgcta
     1261 tctggcgttc cgggatctca tcaaggtgat cgacttgggg ctcgccctgt tcaccgactg
     1321 gggtggggcc tggtacgccg gctcccgcca ccggaccggc tgggacggcg gcatcgggtt
     1381 acggctgggc cccagccggt ccaccgatgt gctgctgtcc cggatcgatc tggtctaccg
     1441 aggccgcacc gatcgcgacg cgccggggtg gctggtggtg attgggcggg ggcttacgtt
     1501 ctcgacggcc agtctgctca ctaactagtc gaggagggtc gaggagggtc gaggagggtt
     1561 gcgttatccg gcactctttc tgccgcatcc ttgttatgtc tcgttcgccg gtagttgcca
     1621 ccttgccttg atggccagat accaagaact caaagtgtgg cagctcgccc accagcttgc
     1681 tcgagaagtt cgtgcgatcg ttcgcaggtt tccagcggag gaacgattcg aactcgccag
     1741 tcagttgcgg cgagccgtgc tttcagtccc cacgaacatc gttgaaggca gtgggttacg
     1801 cggaccccgc ggcttcctgc gccacattcg tatcgcgatt ggctcgctcc gcgaagtgac
     1861 gtacctgctg ctttacgcga aggatgacgg ctacatcact gaatcgaaat accgcgactt
     1921 ggaggatcag acccgccatg tgcgcatcct gcttcaccgg ctagcgaaag ccctcgagcg
     1981 agccacgcag taaccctcct cgaccgccct cgactctcct cgacccccct cgacccccct
     2041 cgaccacttc gatgtacgtg agtgtcatgg aacaagcctc accgcattga cgaagtaggg
     2101 agtttcccca aaacacctgc tccacagccc ccggtgttcg ctgtagtgca gcaccacctg
     2161 ctggcccagc gcggcattca ccgcgtgcgc gaccgagtcg tcccgcaccg tgaagttcca
     2221 agcttccggc atcacccccg gcaccgtcgt catcgccagc tcgccctccc aggtcttaca
     2281 gagccagccc ttgcggctga acttgcgcag gatcccgctc cgatcgccct ccgaataggc
     2341 ccagttatac accactaccg tatagaacag cagggccagc agcgggctga gcagggcaat
     2401 ggccacataa cgcttccact tgcgcttctt ccggaccggc gcagcctcca gaggtggttc
     2461 gtccgggcca ggggattccg gggctgcgtc gtcgctgggc ggtaccgtca tcggatttcc
     2521 agtgttgagg ttgagaccac cgccttcgac tccttcgact ccttcgactg ccttcgaccc
     2581 ccttcgaccg ccttcgactt caaaggatgc gcagcccgaa cgccgaccgg gccaacccca
     2641 cgcacaattc cgccgtcatg ttgtggctgt cgagcaccgg gttgatctcc acgatatcca
     2701 gggacagcat ctggtgggaa tcgtggagca gctccatggc gaggtgggct tcgcggtagg
     2761 tcacaccgcc ccgcaccggc gtgccgacgc cgggggcctc cgccggatcg acgaaatcgg
     2821 catcgaccga cacgtgcagg ccggcggtgc cgttgctcgc gagagcgatc gcgtccgaca
     2881 tcaccgcccg catgccccgc tcgtcgatgt cccgcatggt gaagatccgc actccccagg
     2941 cccgggcgtg gtcccgctcg gcggggtcca ggtcgcgggc gcccactacg accaggttct
     3001 cggcccggac ggctggtccc ggctgggcga tccccgcgag aagggcgtcg ccgtggccta
     3061 acaagtgggc gaccggcatg ccgtggacgt tgcccgaccg ggtgctctcg ggggtattca
     3121 tgtcgccgtg ggcatcgagc cacaccaacc ccaaccgctg attccgctcc gccagcgccg
     3181 tcgcgacgcc cgcggccgag ccggccgcga ccgaatgatc gccccccagc accaggggca
     3241 tgtagccctc ccggatggcc tgtgcggtgt agaccgccag acgctggcag accgtcgcga
     3301 tggcgggaag aaaatcaatg gcctggctgg tctcgggcaa cgtatcccgc tccggggcgt
     3361 ccaggttccc caggttctgc acctcgtgtc ccagctcgct caaacggggc gccaggttgg
     3421 cgatgcgaag cgccgagggg cccatatcga ccccacgccg gctctgcccc aggtcgaggg
     3481 gaacgccgat gatacggatc ttgcccatgg ccgaaagcta agcgcgcccc aaggtctgcg
     3541 agggggcggc acaggatcaa gcagacttga gggagcacgc ccccccacgc gcccgaggcc
     3601 agtacttttc gtgaacgttg gagccacccc gacccgactc atgcgactgc tcgagctggc
     3661 ccgaaccttc tccaccctgg aagcgacctc ctctcggctg aagctggtcg agctggtggc
     3721 cgagctgctg gcgcgggctc gccccgaaga gctggagccg gtcgtctacc tgttgctggg
     3781 gacgctgcgc ccgccctggg aaggagtcga aaccgggatc ggcgaaaagc tcctccagag
     3841 caccctggcg cgcgtctatg gcaagaccac cgaccaggtg cggcgccgga tggcgaaggc
     3901 gggagacatg ggcctggtgg cggagtcgct ggcgtccgcc gcgcggtccc gggtcaccgt
     3961 acggcaagcc taccaggtgc tgctggaggt agcggcagcg gccggatcgg gggcgttagg
     4021 caggaagacc accctgctgg cggacctcct gggcaaactc accggcctcg aagcccggta
     4081 tctggtgcgc gcggcccagg ggagcctgcg cctgggggtc ggcgatcaga cggttctcga
     4141 ggccgcggcg ttaggcgctc tgggcgaccg gggcaagaag ccgttgctgg agcatgccta
     4201 caacgtccgc gccgatctgg gcgatgtcgt gcgggtggcc ttcacccagg gcgcatccgg
     4261 cctggcccgg atcgggcccg ccctgggcgt cccggtgcgt ccggcgctgg ctcaacgcct
     4321 ggcgtcggcc gcggagattg tccagcggct aggcccggtc cagggcgagc ccaagttcga
     4381 cgggttccga ctgcagctgc atcgccgcgg ccagcgggtg tgggccttca gccggcgact
     4441 ggaaaacgtc accgccatgt tccccgagct ggtcgatggc atccgccggc agctcaaagc
     4501 cgagcgggtc atcctcgagg gtgaagccct ggtccacaat cccgagaccg gcgagttcct
     4561 tccctttcag gtcaccatga cccggaaacg caagtcccgc gtcgccgaat cggccgagcg
     4621 gtatcccctc cggctgttcg cgttcgatct gctgtatctg ggacagcagg gctggctcga
     4681 ccgcccgcag cgagagcgga cccggcggtt gcggcagctg gtctcggtgc ggggcgacgg
     4741 tccgatcgcg gtgccggaca cgatcgagac ggcagacccc gaggagttgc aagcctattt
     4801 cgacgacatg atcaaccgcg gcctggaagg catcatggcc aaacggccgg atgccgccta
     4861 ccaggccggc gcccgcggct accactgggt gaagctcaaa cgagcctacc actcgcatct
     4921 gcgcgatacg gtggatctgg tgctggtggg ctatctgcgg ggccggggga aacgcgcggc
     4981 gctgggcatc ggctcgttgc tcgcggccgt gtacgacccc aagcgcgacc gcttccggac
     5041 cgtggccaag atcggggccg gcttgtccga acgcggctgg cgggaactgc gtgccagcct
     5101 cgatcgggcg gcaacccgca ctcggccgcg ccgggtcgat gcgttgatca cacctgatgt
     5161 gtgggtggag ccacgtcacg tcgtcgaggt gctggccgac gagatcaccc gttcgccctc
     5221 acatacctgc ggccgatcag gcgacgcgcc ggggtacgcg ctccggtttc cccggatgct
     5281 gggactgcgc cccgacaagg cgcccgacga cacgactacg gagcgcgaga tcctggactt
     5341 gtaccgaaag cagcgccaga ctaagtgaac ccgagggcgg tcgcggagcc ccctcggatg
     5401 gcaggtttct tgccttccct ccatcacaat tccaccaggt caacttgtga ccgatctcgc
     5461 tccggcaggt ccgggcccaa cgaaatcggg aggttccggg ctcacgggac tgactgtgcg
     5521 cgccgtagcc gggatcacgc tcggcattgc cgccggcatg ctgatcctgc ggcagcagcc
     5581 ggcctggtcc cagccggtgc tgtccgtcgc ggatgccctg gtgcgggcct ggaccaacgc
     5641 cttccgggtg ctggtggtcc ctctggttct ggcccagttg tacatggctg tcggtgttgg
     5701 ccggacctcc aaggccgtgg tgggccggct gggcctggcg acccccctgg tcttcgccgg
     5761 attgatggcg gtgacggcac tgttcagcac cggactcatc atctggctga tgtcgctgcc
     5821 ttcgctggcg gggctctcgc tgcctcagcc gggaaacaat tccgttgcgg gcgcagcaca
     5881 aatcgcggag caggcgacgg gcagctgggt cgacggattc attccacccg acttgttcgg
     5941 ggccaatcac ctgctcccgc tgatgatctt caccgttggg ttcgggctgg ccgcccggcg
     6001 gcttccggcg gcgatgcagg agaccctgct ggccgggttc ggtgcggtgc gggccgcgat
     6061 gttcatcctg gtcgagtggc tgctggtggc gacgccggtc gtcttgttcg ggctgggcct
     6121 cacctccgcg gcgttgtccg gggcccggat cggaggggcg ctcctcgcct tcaccggcgt
     6181 cgaatccctg gtactggtgg ccgcattgct gctgctctat ccgctgacca cgctgctggg
     6241 cggcgtctcc tggcgatggc tggtccgcgc cctgatgccg gcgcagttca cggccgcggc
     6301 cacccgttca tcgctggcca ctattcccgc gttactggcg agcgccgaaa cggggccggg
     6361 ccaggcccgg gtgttcgcga gctacgtgct gccgctggga ggggccatgc tcaagctctc
     6421 gcggtcggtg acgagtccgg tcaagctgct gttcctgtct cacctgttga acatcccgtt
     6481 gagcgcggag caggtagtga ttttcgcggc cacagtcatt ctgatcagcc ccgcgaccgt
     6541 cggcgtgccc cgggtgacgc cagcgacccg gagccttccg gcttatgtcg ctgcgggcat
     6601 tccggccgag tatgtcctcc tgctcggcgc ggctaccgcg gtcaccgacg tgttccagac
     6661 gctgctcaac accaccgggt acatgtcggc caatgtgctg atcggccggt tcgcggcgcc
     6721 ccgtgaagtg atcgccgccg cggtgacggc cccggccccg gtcgggcccc agtgggcgga
     6781 aggacagccc gccggcgatt cgcagtaggt aactcgaggt tgatcggtgg cggtgagctt
     6841 gaaaaagctg cgttgtcgtg cgagtttcag cggtcccggc gccgtagcca agtggtaagg
     6901 cagaggtctg caaaacctcc atgcggcggt tcaaatccgc ccggcgcctc tgccaacggg
     6961 cccgcatttg cgggcccgtt ggcatttggc gccgtggcct ctccaagccc cacgcgtaac
     7021 ccaaggcgta cagttgtcgg aaggcgccgc cctggtgga
//
LOCUS       DASWKS010000502         2821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2497290, whole genome shotgun sequence.
ACCESSION   DASWKS010000502 DASWKS010000000
VERSION     DASWKS010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2497290"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..1028
                     /locus_tag="VGA78_14200"
     CDS             72..1028
                     /locus_tag="VGA78_14200"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEX9895078.1"
                     /translation="MSRVIAAIIQAEVQSTAGATLALSAAKAREARAQGARLLVFPET
                     WLPGYPAWLDTCRDAALWNWGPANQAYARLASESVVVGRGGLFEGLQAIARDNEAVVV
                     CGVTERVDAGPGRGTLYNALLTLGPDGILLNHHRKLVPTFSERLVWGPGDTAGLRAVD
                     TPVGRIGGLVCWEHWMPLARYALHQSGEDIHVAVWPTVAEMHVVASRAHGFEGRCFVL
                     AAGSLMKASILPAGLEPHPAKVQSPDALVLRGGSCIIAPNGQFVVEPVFDREAVLVAE
                     LDLDQCRVEGFTRDVTGHYQRPDAFEFSVKPSGRGTPLTIDN"
     gene            1179..>2821
                     /locus_tag="VGA78_14205"
     CDS             1179..>2821
                     /locus_tag="VGA78_14205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895079.1"
                     /translation="MRASLLLAFGMVPGVLAAQAPRPMTFLDVQQFRNAGGVTISPDR
                     SQALYTISVPDWKEARRQTDVYLVSVEGGVETARQMTFTKDKSENAPRWIPDGKSFVF
                     SSSRDGTGTNPPAQLYLMRIDGGEAMRLTDAKDGVDDFEVSRDGKWVVYSAGKPEERQ
                     LWALPVAGIDSAKPKQLTKHKTPVRNWQLSWDSRRIAFLAPDTLDQDNRTRREKRFTV
                     NVRNEEQPIEHLWLVDLGTLEEKRLTSGVEYSVGGVTLSRDGRWAGFRGTPNDRYKRN
                     VTETGIYGDAYLLELESGKIERLTTNEVGEGPVTFSPDGSMIALSAPNDWAYFRDSKI
                     WVRPVTPAGAPWKKLGGAYDGDLNLGWWSEDGKTLYTTDGVKGTSQALALSVETGEVR
                     QLTTLQGSMFATRDDRTGVILVSYSDPASPGDTYLVASPDDLADRARWRRLTRSNPQA
                     GQFTLGEASEISWKSKDGKTVGGILVKPVGYQPGRRYPLVVQIHGGPAGADVLRWNPG
                     VNAMVYAGNGYAVLLPNYRGSTNYGERHRLDIVGNYFQKG"
BASE COUNT          482 a          904 c          978 g          457 t
ORIGIN      
        1 acgattgtga gctcgtgcct cggggagcaa tcgtcagttg tcaatcgtca atcgtcaatg
       61 gggaaacgcg catgtcccgt gtcatcgccg cgatcatcca ggccgaggtc cagtccacgg
      121 ccggggcaac cctcgcgctg agcgccgcga aggcgcgaga ggcccgggcc cagggcgctc
      181 ggctgctggt gtttccggag acctggcttc ccggttaccc cgcctggctg gatacctgcc
      241 gcgatgcggc gctttggaac tggggtccgg ccaatcaggc ctacgcccgg ctggcgtcgg
      301 agagtgtcgt ggtcggccgc ggcggactgt tcgaggggct gcaggccatt gcgcgggaca
      361 atgaggcggt ggtggtctgc ggtgtcaccg aacgggttga cgccggtccg ggccgcggca
      421 ccctctacaa cgccttgctg acgttgggcc ccgacgggat cctgctcaac catcaccgca
      481 agctggtccc caccttttcc gagcgactgg tgtggggccc gggtgatacg gccggactgc
      541 gggcggtcga tacgccggtg ggacggattg gcgggctggt ctgctgggag cactggatgc
      601 cgctggcacg ctatgccctg caccagtccg gtgaggacat ccacgtggcg gtgtggccca
      661 cggtagcgga gatgcacgtg gtggcgagcc gcgcccacgg gttcgaagga cgctgcttcg
      721 tgctcgcggc gggttcgctg atgaaagcct cgatcctgcc ggcgggcctc gagccccatc
      781 cggccaaggt ccagtcgccc gacgccctgg tgttgcgggg cgggagctgc atcatcgctc
      841 ccaacggaca gttcgtggtc gagccggtct tcgaccggga ggccgtgctg gtggcggagc
      901 ttgatctgga tcagtgccgg gtggagggct tcacccggga tgtgaccgga cactatcagc
      961 gcccggacgc gtttgagttt tccgtcaagc caagcggcag gggtactcca ttgacgattg
     1021 acaattgacg agtgacaatt gctggtgacg acgctcaaga ccaaggcggc agcgggtaat
     1081 cgtcaattgt caatcgtcaa tgggttttca acgcctctcc ccccgaccgc gtagagatta
     1141 ggttccccat tcggtccaag tatcccagga gcatgtacat gcgcgccagt ctcctccttg
     1201 ccttcggcat ggtccccggt gtcctcgccg ctcaggctcc gcggccgatg acgttcctcg
     1261 atgtgcagca attccggaat gcgggcggag tcaccatcag tccggaccgg agtcaggcgc
     1321 tgtacaccat ctcggtgccg gactggaagg aggctcgccg ccagaccgac gtctacctgg
     1381 tctcggtcga gggtggcgtc gagaccgccc gccagatgac gttcaccaag gacaagagcg
     1441 agaacgcgcc ccgttggata ccggatggga aatcgttcgt gttcagctcc agccgcgacg
     1501 ggaccgggac caacccgccg gcccagctct acctcatgcg gatcgacggc ggcgaagcca
     1561 tgcggctgac cgacgccaag gacggggtcg acgacttcga ggtcagccgc gacggcaagt
     1621 gggtggtcta ctcggccggc aagccggagg agcgacagct ctgggccctg ccggtcgccg
     1681 gcatcgactc tgccaagccc aaacaactca ccaagcacaa gacgccggtg cggaactggc
     1741 agctgtcgtg ggacagccgc cggatcgcgt tcctcgcgcc cgataccctg gaccaggaca
     1801 accggacccg gcgggagaag cggttcacgg tcaacgtgcg caatgaggag cagccgatcg
     1861 agcacctctg gctggtggac ctgggaaccc tggaggagaa gcggctgacc agcggggtcg
     1921 agtactcggt gggcggcgtc acgctgtcgc gcgacggccg gtgggccgga ttccggggca
     1981 cacccaacga ccgctataag cggaacgtca ccgagaccgg tatctacggg gatgcctatc
     2041 tgctggagct ggagtcgggg aagatcgagc ggctcacgac caacgaggtc ggggaagggc
     2101 cagtcacctt ctcgcccgac ggctcgatga tcgccctttc ggcgcctaac gactgggcct
     2161 atttccgtga cagcaagatc tgggtccggc ccgtcacccc ggccggcgcc ccgtggaaga
     2221 agctgggcgg cgcctacgac ggcgatctga acctgggctg gtggtcggag gacggaaaga
     2281 ccctctacac caccgacggg gtcaagggca ccagccaggc attggcgctg tcggtcgaga
     2341 ccggcgaggt gcggcagctc accacgctgc agggttcgat gttcgcgacc cgggacgacc
     2401 ggaccggcgt catcctggtg agctacagcg atccggccag ccccggcgat acctatctgg
     2461 tggcgtcgcc cgatgacctg gcagaccgcg cccgctggcg gcggctgacg cggtccaacc
     2521 cgcaggccgg gcaattcacc ctgggcgaag cctcggagat ttcctggaaa tccaaggacg
     2581 gcaagacggt gggtggcatc ctggtgaagc cggtgggata ccagcccggc cgccgctatc
     2641 ccctggtggt ccagatccac gggggacccg ccggggcgga cgtgctccgc tggaaccccg
     2701 gcgtcaatgc catggtctac gccggcaacg gctacgcggt cctgctgccc aactatcgcg
     2761 gctccaccaa ctacggggag cggcaccggc tcgacatcgt ggggaactac ttccagaagg
     2821 g
//
LOCUS       DASWKS010000503         5862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1765395, whole genome shotgun sequence.
ACCESSION   DASWKS010000503 DASWKS010000000
VERSION     DASWKS010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5862
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765395"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(306..2498)
                     /locus_tag="VGA78_14210"
     CDS             complement(306..2498)
                     /locus_tag="VGA78_14210"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9895080.1"
                     /translation="MPLLLLMCLMPGETGRMGALSGTVTDSGGTQLHYVHIEVVEMHR
                     HAETDAQGRYTLSGLPSGSYSVSFALVGYRPVVRRVTIGAADLTLDVVMARSIIEIPT
                     LQVSASAVATTALTSPQPLSVLDGEALAAAQRPTLGETVELQPGLRNFSTGSGIGKPV
                     IRGLSSNRVLVASDGLRLESQQWGDEHGPQVETADAERIEVIRGPASVLYGSDAIGGV
                     INVVRRPLPDAMDRSPFVSGLLTGGYGTNREAPEGLLALEGASGAFGFRGSLAGRRSD
                     DIKTPIRTLNNSGYSSWGGSAAAGVRGSWGSFALDYAGRKERVEIHEDPAEEPDFTGF
                     QRIADDRVRGELDVPVGSNRLEITTSWARNNRREFEEGGSDEVALGLRSKDLNGEVRL
                     HHTIGDWAGIVGVAGKRNTFEKYGEESLIPNSDATNLGVLLFEQREAGQWLLSFGLRY
                     DHRRLEVEDDADLAVAAQTRSYNSVAGNLGLLYRVSEPVALVLNVGRGYRAPSSFELF
                     ANGVHEGTVRFERGDPTLTNETSINGDLALRVQHGSIRFEVGGFVNRISDYIFPDPTG
                     LTDPESGFDIFQYTQGDATLAGFEAAGDYHPAEQWHLRAGADWVRGQNTSLGQPLPFI
                     PPFRVTYGVRWEGGESDGRVHSPYVDVGGETNVEQKRLDPEDFAPPGYTLVNAGAGVA
                     FGLSNQILHVDLAVRNLFDQEYANFLSRYKTYAPDPGRNVTLRLTWQF"
     gene            complement(2586..2933)
                     /locus_tag="VGA78_14215"
     CDS             complement(2586..2933)
                     /locus_tag="VGA78_14215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 family protein"
                     /protein_id="HEX9895081.1"
                     /translation="MRMFRRVRFRQLLTVVAALSFGATGPGLSGVELAAHISGLVDLS
                     HQRRAHLEPAGQSGHTDHCQLGLVAYDGRLPAAAVPMLRHRAELAERPTPTCQAAPRL
                     RRWAFGFPRAPPV"
     gene            complement(2989..4575)
                     /locus_tag="VGA78_14220"
     CDS             complement(2989..4575)
                     /locus_tag="VGA78_14220"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9895082.1"
                     /translation="MNRGWSRLYHPAPLTWAAVLLGWVGVYAAYRGSTLGAVFAAFAM
                     LAGTTAFFRGRELGRLRRQSLRTAVEAAAARNRALTALRELGGRLLQVDTLEQLFDEV
                     TRAALDLFLAEGAALHLVVEEGRFLKVMAARGTYSSRLGALIPSDRSLNGWVLVHDRG
                     LIVDDLGADPRSHPPEGVPVESRRGLYAPLRSSGLVLGTVMVSDRNQGIAYTEADLEL
                     LQTLADQVAVGIDRTRALVDRRWTAEALALKNQELVRATRLKSEFLANMSHELRTPLN
                     AIIGFSDLLLTGGLGPVEGVHKEFLESISRNGNHLLGLINNVLDLSKIEAGQISYTLS
                     PTDLRQAITASVTDTASLRTAKRQSVAIDLEEGPLTILADGQRVRQILFNLLSNASKF
                     TPESGHIALSALRTRAPLPVPADRADDRRAMITRDAVWIAVSDDGIGVRAQDTGKLFV
                     EFSQVDSSASRRAQGTGLGLALCRKFVELHGGTIGCESIFGKGSTFWFILPVEGPVRR
                     QEGGLRTSDADRLERGASLA"
     gene            complement(4572..4793)
                     /locus_tag="VGA78_14225"
     CDS             complement(4572..4793)
                     /locus_tag="VGA78_14225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895083.1"
                     /translation="MPSTGAGIRIDRCICMRMTFEWLLPLARAGGWTLDDLMRETGCG
                     AQCGLCRPYLRRMLATGEVVFHDIIEDHG"
     gene            complement(4873..5367)
                     /locus_tag="VGA78_14230"
     CDS             complement(4873..5367)
                     /locus_tag="VGA78_14230"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9895084.1"
                     /translation="MTTTAGAVTLRPLAGRDHAAVEIMTRAVGVFRRDEIPVALEVFQ
                     AAASRTDTYEGLAAERDGRLVGWICWGATPCTLGTFDLYWIVVDPSCQGQGIGTLLLQ
                     AMEQALAGRARLIVVETAGRADYAPTRAFYLKHRYQAVACIPDFYAPGDDQVTFAKAL
                     TIDD"
     gene            complement(5364..>5862)
                     /locus_tag="VGA78_14235"
     CDS             complement(5364..>5862)
                     /locus_tag="VGA78_14235"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895085.1"
                     /translation="SEQWDEVMVQEFVDGREFYVGFLGPGVLPLSEISFETLREGYWR
                     IVSYAAKWVEGSPEYQGTVAVCPAQVEPALAERIVEVARMAWDALAGEGYGRVDLRVS
                     SEGKPWVLEVNPNPDLSTDAGFAGMARAHGWDYDQLVGQVVDEALVRASRRSADEGLV
                     RQIAG"
BASE COUNT         1000 a         2018 c         1935 g          909 t
ORIGIN      
        1 tttccgaaga ccagcgcaac gccggccccg gcgtgagcca ggggtgtatc cggggggtcc
       61 gccgcagcgc ctgggcggtc gtcctgacct gatcaccact taccacaatc ggtaggcgat
      121 tgaaactcac cagggcgtca cagcatgtcg gtccgacacg ctgtgtggcc gtaatttcac
      181 cccggccaag tctccccgca gcccgcctaa acctcggacc ggtcgcgacg taagggccac
      241 cgcttccaat ctgatacgag cctggtgaac gaagttctgt cagcgtccgc tggtgcgagg
      301 ggcgttcaga actgccaggt caagcggagc gtcacattcc gtcccgggtc cggagcatag
      361 gtcttgtacc ggctcaggaa gttggcgtac tcctggtcga aaagattccg aaccgccagg
      421 tccacgtgga ggatctggtt actgaggccg aacgccaccc cggcaccggc gtttaccagg
      481 gtataaccgg gcggcgcaaa gtcctccgga tcgaggcgct tctgctccac gttggtctcg
      541 cccccgacgt ccacataggg tgaatgcacc cggccatcgc tctcccctcc ctcccaccgg
      601 acaccgtaag tgacccggaa gggcgggatg aatggcaacg gctggccgag gctggtgttc
      661 tggccccgga cccaatccgc cccggcccgg agatgccatt gctcggcggg gtggtaatct
      721 cccgcggcct cgaagccggc gagggtcgcg tcgccctggg tgtactggaa gatgtcgaac
      781 ccggactctg ggtcggtcaa cccggtcgga tcgggaaaga tgtagtcgct gatccgattg
      841 acgaagccac ctacttcaaa gcggatcgag ccgtgctgca cccgaagcgc gaggtcgccg
      901 ttgatcgacg tctcgttggt cagtgtggga tcgccccgtt cgaagcgaac ggtcccctcg
      961 tgcacgccgt tggcgaacag ctcgaacgac gacggcgcgc gatagccccg ccccacgttc
     1021 agcaccagcg caaccggctc ggacacccgg tacaacagac cgagatttcc ggcgaccgag
     1081 ttgtagctgc gagtctgggc tgcaaccgcc agatcggcgt cgtcttccac ctccagccgc
     1141 cggtggtcgt atcgcagtcc gaacgacagt agccactggc ccgcttcgcg ttgctcgaac
     1201 agcaacacgc cgaggttggt ggcgtcggag ttcggaatca gggactcctc gccgtacttc
     1261 tcgaaggtgt tgcgtttgcc ggcaaccccc acaattccgg cccagtcacc gatggtgtgg
     1321 tgcagccgca cctcaccgtt cagatccttg gagcgcaggc ccaacgcgac ctcatcgctc
     1381 cccccttcct cgaactcgcg ccggttgttg cgggcccacg aggtggtgat ttccagccgg
     1441 ttcgacccca cgggcacgtc gagctcgccg cgaacccggt cgtccgcgat ccgctggaag
     1501 ccggtgaagt ccggctcctc cgccgggtcc tcgtgaatct cgactcgttc cttccggccg
     1561 gcataatcga gggcgaagct gccccacgac ccgcggacgc cggcagccgc ggagccaccc
     1621 cacgaggagt agcccgagtt gttgagggtc cggattggcg tcttgatgtc gtccgaccgg
     1681 cggccggcga gcgatccccg gaagccgaac gccccgctgg ccccctcgag cgccagcaag
     1741 ccctccggcg cttcacggtt ggttccgtag ccgccggtca atagtcccga gacgaacggc
     1801 gaacgatcca tcgcatccgg caggggccgg cggacgacgt tgatcacgcc cccgatggca
     1861 tccgagccgt agagcacgct ggcggggccg cggatcacct cgatccgctc ggcgtcggcg
     1921 gtttcaacct gggggccatg ttcgtcaccc cactgctgac tttcaagtcg cagtccgtcc
     1981 gaggccacca gcacccgatt ggaagagaga ccccgaatca ccggcttgcc gatgcccgaa
     2041 ccggtactga agttccggag tcccggctgc agttcaaccg tctcgcccag agtgggacgc
     2101 tgcgccgcgg ctagcgcttc gccgtccagc accgagaggg gctgcggtga ggtcagcgcc
     2161 gtggtggcaa ccgccgaggc cgaaacctgc aaggtcggga tctcgatgat ggagcgggcc
     2221 atcaccacat ccagcgtcag gtccgccgcg ccgatggtca cccgccgaac caccggacga
     2281 tatcccacca gcgcgaacga aacgctgtac gagccggaag gaagcccact cagcgtgtat
     2341 cggccctggg cgtcggtctc ggcgtggcgg tgcatctcca cgacttcaat atggacatag
     2401 tggagctgag ttccccccga atcggtcacc gtacccgaca gggcgcccat ccgtcccgtc
     2461 tcaccaggca tgagacacat cagcaagagc aacggcatgg catcttctcc tcgcgaaagg
     2521 ccagtgaccg gccgagtcag ctcggactcg accggtcggt tgataccgcg attgtagggc
     2581 gaggatcaga cgggtggtgc gcgtggaaag ccgaatgccc agcggcgcaa ccggggcgcc
     2641 gcctggcagg taggagtggg gcgctcggcc agctccgcgc ggtggcgaag catggggacg
     2701 gctgcggccg gcagtcggcc atcgtaggcg accagtccca gctggcaatg gtcggtgtgg
     2761 cccgactgcc cggcgggctc caggtgcgcc cgccgctggt gcgacagatc caccagtccg
     2821 gagatgtgcg cggcaagctc gaccccggaa agccccggtc ccgtggcgcc aaacgaaagc
     2881 gccgcgacga ccgtgaggag ctgccggaac cggacccgcc gaaacatccg cataccggcc
     2941 aatctagtgc cggtccaagt cggggcgcca acggcctcgg ctggctgcct aggcgagaga
     3001 cgctccgcgc tccagccggt cggcgtcgga ggtccggagg ccgccttcct ggcgccggac
     3061 gggtccctcc accgggagga tgaaccagaa ggtgctgccc ttcccgaaaa tcgattcgca
     3121 cccgatggtg ccgccgtgca gctccacgaa tttccggcac agcgccagcc ccaggccggt
     3181 gccctgcgcc cgccggctgg cggagctgtc gacctggctg aattcgacga acaacttccc
     3241 ggtgtcctgg gcccggactc cgatgccgtc gtcgctgacc gcgatccaca ccgcgtcccg
     3301 ggtgatcatg gcccgccggt cgtcggcccg gtcggccggc accggcaggg gggcccgggt
     3361 tcggagggcc gagagcgcga tatgcccgct ctcgggcgtg aacttggagg cgttggagag
     3421 caggttgaag aggatctgcc gcacccgctg gccatcggcc aagatggtga gcggcccttc
     3481 ctccagatcg atcgccacgc tctgtcgttt ggcggtgcgc aggctggcgg tgtccgtcac
     3541 cgaggcggtg atcgcctgcc gcagatcggt gggggagagg gtgtaactga tctggccggc
     3601 ctcgatcttg gagaggtcga gcacgttgtt gatcaggccg agcaggtggt tgccgttccg
     3661 ggaaattgac tccaggaatt ccttgtgcac gccttcgacc ggccccaagc cgccggtcag
     3721 cagcagatcg gagaagccga tgatggcgtt gagcggggtc cggagctcgt gcgacatgtt
     3781 ggcgaggaac tcgctcttga gccgggtggc ccgaaccagc tcctggttct tgagcgccag
     3841 cgcttcggcg gtccagcgcc ggtcgaccag ggcgcgggtc cggtcgattc ccaccgccac
     3901 ctggtccgcc agggtctgca gcagctcgag gtcggcctcg gtgtaggcga tcccctggtt
     3961 gcgatcgctc accatgacgg tgcccagcac cagaccggat gaacggagcg gagcatagag
     4021 gccacggcgc gattcgaccg gcaccccttc gggcggatgg gatcgcgggt cggcgccgag
     4081 gtcgtccaca atgagtcccc ggtcgtggac caggacccag ccgttgagcg agcgatccga
     4141 cgggatcagc gcgcccagcc gggaggaata ggtcccccgc gcggccatca ccttgagaaa
     4201 ccgcccctcc tccaccacca ggtgcagcgc cgccccttcc gccagaaaga ggtcgagcgc
     4261 cgcccgggtg acttcatcga acagctgctc cagggtgtcg acctgcagca gccggcctcc
     4321 cagctcgcgc agggcggtca gggcccgatt gcgggcggcg gccgcttcga ccgcggtccg
     4381 gagcgactgg cgtcgcagcc gacccagctc ccgcccccga aagaacgcgg tggtcccggc
     4441 caacatcgcg aacgcggcga agaccgcacc cagggtggag ccgcggtagg cggcgtagac
     4501 gccgacccag cccagcagca ccgccgccca ggtgagcggg gcaggatggt agagtcggga
     4561 ccagccgcgg ttcacccgtg atcctcgatg atatcgtgaa ataccacttc gccggtggcg
     4621 agcatccgtc gaagataggg ccggcacaag ccgcactggg cgccgcagcc ggtttcccgc
     4681 atcaggtcat ccagggtcca gccaccggcg cgtgccaacg gcagcagcca ctcgaacgtc
     4741 atccgcatgc agatgcagcg atcgatccgg attccggcac cggtcgaggg catcagtggc
     4801 gcattgatga ttgacgattg acgatcgacg attgccggcc accgattccc ggcctgacgc
     4861 aatcgtcaat catcaatcgt caatcgtcaa tgccttggcg aaggtcacct ggtcatctcc
     4921 cggcgcatag aagtcgggaa tgcaggcgac cgcctggtag cggtgcttga ggtagaaggc
     4981 ccgggtcggt gcgtagtccg cccgtcccgc ggtttccacg acgatcagac gggcccgtcc
     5041 cgcgagggcc tgttccatcg cctggagcag gagcgtgccg atcccctgtc cctgacacga
     5101 gggatcgacc acgatccagt agagatcgaa ggtgccgagg gtgcaggggg tggcgcccca
     5161 gcagatccag ccgaccagtc ggccgtcccg ctccgccgcc aggccctcgt aggtgtcggt
     5221 gcgggatgcg gcggcctgga agacttcgag ggctaccggg atttcgtcgc ggcggaagac
     5281 gccgaccgca cgagtcatga tctcgaccgc ggcgtggtcg cgcccggcga ggggacgaag
     5341 cgtgaccgcg ccggccgtgg tagtcatccg gcgatctggc gcaccagccc ctcgtcggcc
     5401 gagcggcggc tggcccgtac cagcgcctcg tccaccacct ggcccaccaa ctggtcgtaa
     5461 tcccatccgt gggcccgggc catgcccgcg aagccggcgt cggtggagag atcgggattg
     5521 ggattgacct cgaggaccca gggcttgcct tcggagctca cccgcaggtc gacccgtccg
     5581 tagccctccc ccgccagggc gtcccaggcc atccgggcca cttccacgat acgttcggcc
     5641 agggcgggtt ccacctgggc gggacagacc gcgacggtgc cctggtactc ggggctccct
     5701 tcgacccatt tggcggcgta ggacacaatg cgccagtagc cctcccgcaa cgtctcgaac
     5761 gagatctccg agagcggaag cacccccgga ccgaggaacc cgacgtagaa ctcccgcccg
     5821 tccacgaact cctgcaccat cacctcgtcc cactgctcgc tg
//
LOCUS       DASWKS010000504         3453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3569313, whole genome shotgun sequence.
ACCESSION   DASWKS010000504 DASWKS010000000
VERSION     DASWKS010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3569313"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..843)
                     /locus_tag="VGA78_14240"
     CDS             complement(115..843)
                     /locus_tag="VGA78_14240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895086.1"
                     /translation="MRYCHSRYAGYVDRLIPGLYLSLVAACSTGTPALVLPANGTPAA
                     AEEAKSWVRQMHPGVLVLHRFRWQYQDRDGAGGGRGSARITPGDSLRLDMIGPLGTGR
                     GAAFVIGDRQQWAEPEEEVRKVAPSFPLLWAMLGLPRLPEGFEGVTRFEAAQLVAWRF
                     VRGPDTVEIARLAGPPVRLIADVRESGVRLGRVETMFTEAGGLKSSRLDIPGVEARLQ
                     LNYYETSRPTAFPPDTWRPPERQP"
     gene            complement(889..1317)
                     /locus_tag="VGA78_14245"
     CDS             complement(889..1317)
                     /locus_tag="VGA78_14245"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX9895087.1"
                     /translation="MSPEATADVIHRVTYSETDQMGVAYYGWYTVWLEKARTEYLRQT
                     GMTYRELEAGGLRLAVSEVRIRYRAPARYDDLVRVRCWVREIASRRVTFGYAVELAET
                     GTLLATAETALLALDQNFNPVRLPNGLRERLPPSPDPVRI"
     gene            1408..2145
                     /locus_tag="VGA78_14250"
     CDS             1408..2145
                     /locus_tag="VGA78_14250"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9895088.1"
                     /translation="MTDSVGQQLVIVGDAHLGAVPDEVETAMLAFLEQVPELGDALLV
                     NGDLFDFWFAWRRAIPRSGFRIASALAHLARRVPVLMTGGNHDRWGDSFWDRDAKVRF
                     GSEGLRFQLGGSAVLALHGDGIAEQHWSARLMHRLTRHPITIAGFRSLPPDFGFWLVD
                     RLSGRLADSTREGEVLDRAARAQRAWAELRLRNDPSIALLVMGHTHRVALSEPFPGRR
                     YLNPGAWLDGLRYAVATEAGVELRQFH"
     gene            complement(2214..3023)
                     /gene="murI"
                     /locus_tag="VGA78_14255"
     CDS             complement(2214..3023)
                     /gene="murI"
                     /locus_tag="VGA78_14255"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEX9895089.1"
                     /translation="MNRAPIGIFDSGLGGLTVARAVFNRLPHDSTIYFGDTARVPYGP
                     KSPDTVRRYSREILDWLLSQRVKAVIVACNTSTAHALETLRRQSPVPVIGVVEPGARA
                     AVRAGGGGPIGVIGTAGTVASDAYQRAIHAIAPGIRVLQQACPLLVPFVEEGWFDHPA
                     AELVAREYLAPLMREGIQSLVLGCTHYPLLKPLFRRVLGPAVTLIDSAEETATAAAQA
                     LLEVSLEAPADQQPVHRFAVSDDPARFVTVGSRFLGERLGEAELVSLTIDD"
     gene            complement(3020..>3453)
                     /locus_tag="VGA78_14260"
     CDS             complement(3020..>3453)
                     /locus_tag="VGA78_14260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895090.1"
                     /translation="TTKMVPPPRPVRAVQDTAIYRRPPVTPMGAFFRSLVLPGWAQAK
                     LGRRLTGGIFLAWEGVTLGMSLKADRELQYLKQRGDSAEALEDKRQEREDWLILLAFN
                     HLFAGLEGYVASHLWDFPQDLRIRTAPHGFGAMVSLPIRIR"
BASE COUNT          597 a         1136 c         1163 g          557 t
ORIGIN      
        1 gtgagggtgg gatcggaggt caggttctcg aagggaagca cggccaccgt gcggattccc
       61 tcgggcaatc cgccgcccgc gaatccgtac atgcacccgc cgagcagcag cgcgctaagg
      121 ctgacgctca ggcggacgcc aagtatccgg cggaaaggcc gtggggcgtg aggtctcata
      181 gtagttgagt tgcagtcggg cctccacgcc gggaatatcg agtcgcgacg acttgagccc
      241 gcctgcttca gtaaacatgg tttcgacccg gcccagccgg acaccgctct cccggacatc
      301 ggcgatcagg cggacaggcg gcccggccaa tcgggcgatt tccacggtat ccggtccccg
      361 aacgaatcgc cacgccacca gctgcgccgc ctcgaatcgg gtgacaccct cgaacccctc
      421 gggcagccgg ggcaggccca gcatggccca cagcaatgga aagctggggg cgactttgcg
      481 gacctcctcc tccggctcgg cccactgctg tcggtcgccg atgacgaaag cggcaccgcg
      541 accggtcccc agggggccga tcatgtcgag gcgcagggag tcccccggtg tgatccgggc
      601 gcttcctcgc cctccgccgg ccccatcccg gtcctggtat tgccaccgga accggtgcaa
      661 caccaatacc cccgggtgca tctgtcggac ccaggacttg gcttcctccg ccgcggcggg
      721 ggtgccgttg gccggcagga ccagggcggg cgtcccggtg gaacaggccg cgaccaggga
      781 aagatagagg ccggggatca ggcggtcaac gtaaccagcg tatcggctgt ggcagtatct
      841 cattatttga tgacatgata cgctgtagat ctaaactact ttctcaagtc aaattcggac
      901 cggatcaggg ctgggtggca gccgctcgcg cagcccgttg ggcaaccgca cggggttgaa
      961 gttctggtcg agggccagca aggcggtctc cgccgtggcc aggagcgtcc cggtttcggc
     1021 cagctcaacg gcgtacccga aagtaacccg acgtgacgca atctcccgca cccagcagcg
     1081 gacccgaacc agatcgtcgt agcgggcggg ggcgcggtac cggatccgaa cctcgctgac
     1141 ggccagccgc aggccaccag cctccagctc ccggtaggtc atcccggtct ggcgcaggta
     1201 ctcggtgcgg gccttctcga gccagaccgt gtaccagccg taataggcca cccccatctg
     1261 atcggtctcg gagtaggtga cccggtggat gacgtcggcg gtggcttcag gagacattga
     1321 cgattgtcga ttgacggttg acgattgggg cgcggcgttc caactccgcg cgggacgtaa
     1381 tcgtcaatca tcaatcgaca atcgtcaatg accgattccg ttggccagca gctggtgatc
     1441 gtgggcgatg cccatctcgg cgcggtcccc gacgaggtcg aaacggcgat gctggcattt
     1501 ctggagcagg tccccgagct gggggacgcg ctcctggtca acggcgatct ctttgatttc
     1561 tggttcgcct ggcgccgagc cattccccgc agcgggttcc ggatcgccag cgcgctggcc
     1621 cacctggccc ggcgagttcc agtgctgatg accggcggca accacgaccg ttggggcgac
     1681 tccttctggg atcgcgacgc caaggtccgg ttcggcagcg aggggttgcg cttccagctg
     1741 gggggcagcg cggtgctggc gctgcatggc gacggaatcg cggagcagca ctggtccgcc
     1801 cgtctgatgc atcgattgac tcgccacccg atcaccatcg ccggctttcg cagcctgccc
     1861 cccgacttcg gattctggct ggtggatcgt ctgagcgggc ggctggccga cagtacccgg
     1921 gaaggcgaag tgctggaccg cgcggcccgg gcccagcgcg cttgggccga gctccggctc
     1981 aggaacgatc cgtcgatcgc tctgctggtg atgggacaca cccaccgggt ggcactgtcg
     2041 gagccctttc ccggccggcg gtatctcaac cccggagcgt ggctggacgg actgcggtat
     2101 gcggtggcga cggaggcggg ggtggagctg aggcaattcc attgacgatt gacgattgac
     2161 gattgacgat tgcgtcgtgc cggctccgtg gaacgagcgc cagaaagcaa tcgtcaatcg
     2221 tcaatcgtca atgacaccag ctccgcctct cccagtctct cccccaaaaa ccgagacccc
     2281 accgtcacga agcgcgccgg atcgtcgctc accgcgaaac ggtggaccgg ctgctgatca
     2341 gcgggagcct ccagggaaac ctcgagcagc gcctgggcgg ctgcggtggc ggtttcttcg
     2401 gcgctgtcga tcaacgtcac cgcggggccg agtacccggc ggaagagcgg cttgagcaag
     2461 gggtagtggg tgcaccccag caccagcgat tgaatcccct cgcgcatgag cggggccagg
     2521 tattcgcgcg ccaccagttc ggccgcggga tgatcgaacc atccttcctc gacgaacggg
     2581 acgagcaggg gacaggcttg ctgcaagact cgaataccag gggcgatcgc gtgaatggct
     2641 cgttgatagg catcgctggc gacggtgccc gcggtgccga tcacgccgat cggccctccc
     2701 ccaccggccc gcaccgcggc ccgggctccg ggctcgacca caccgatgac cgggaccggc
     2761 gactgccggc gcagggtctc gagggcgtgc gcggtgctgg tattgcaggc cacgatcacc
     2821 gccttgacgc gttgcgagag cagccaatcg aggatctcgc ggctgtaacg gcgcacggta
     2881 tcgggtgact tgggcccgta gggcacccgg gcggtatccc cgaagtagat ggtcgagtcg
     2941 tgcggcaggc gattgaacac ggctcgcgcc accgtgagcc cgcccaggcc cgaatcgaaa
     3001 atgccgatgg gggcgcggtt catcgaatcc ggatcggcag gctgaccatc gccccgaagc
     3061 cgtggggcgc ggtccggatg cgcaggtcct gcggaaaatc ccagaggtgg ctggcgacgt
     3121 acccctccag cccggcgaag agatgattga acgccagcag gatcagccag tcctcccgtt
     3181 cctgccgctt gtcttccagg gcctcggcgg agtcaccccg ctgcttgagg tactgcagct
     3241 cgcggtcggc cttgagggac attcccagag tcacgccttc ccacgcgagg aagatcccgc
     3301 cggtcaggcg ccggcccagc ttggcctgag cccaccccgg cagcaccagc gaacgaaaga
     3361 acgcccccat cggagtcacc ggggggcggc gataaatcgc cgtgtcctgt accgccctca
     3421 ccggtcgggg aggaggaacc attttagtcg tgt
//
LOCUS       DASWKS010000505         5366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3569713, whole genome shotgun sequence.
ACCESSION   DASWKS010000505 DASWKS010000000
VERSION     DASWKS010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3569713"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(741..1709)
                     /locus_tag="VGA78_14265"
     CDS             complement(741..1709)
                     /locus_tag="VGA78_14265"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX9895091.1"
                     /translation="MEGSTPPAGEAGSPTQIHHVAERNTEQIRALDREKTVVLLPGGI
                     LEEHGPYLPSFADGYVSEHVTDALARAIAARPGWTALLFPLIPLGVAPANEIGSKYTF
                     DGSYTVRSTTLRAVYMDLATELGEGGFRNIFVVHFHLGPNQSRALDQAADYFNDTYGG
                     QMVHLVGLMPVIGSYAGAAQNATEAERAENGFGVHADLVETSINLFLRPHLVAPGYAE
                     APSFTGNSISELIPAAEQAGWPGYLGSPRHARPDIGAAALTSVTNTITDLALKILDGF
                     DYRQIPRYGDVTRNDSGNAVIDRRATADEQENERRQVAWLRRTGLP"
     gene            complement(1815..2177)
                     /locus_tag="VGA78_14270"
     CDS             complement(1815..2177)
                     /locus_tag="VGA78_14270"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9895092.1"
                     /translation="MDPVLSRISAALADRYRVERELGSGGTALVFLAEDLKHHRRVAI
                     KVLRPELAATLGPERFLREIEIAAQLEHPHILTLIDSGTAAGLLFFSALAAHCEPLGS
                     STRTPPDQCRRDIGAPHS"
     gene            complement(2229..3881)
                     /locus_tag="VGA78_14275"
     CDS             complement(2229..3881)
                     /locus_tag="VGA78_14275"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HEX9895093.1"
                     /translation="MTASVRARVSDLAARELDLLVIGGGITGAGVLRDAAMRGLKVAL
                     VERADFGAGTSSRSSRLIHGGLRYLEHRQWRLVFEALHERAILLRLAPHLVRSLAFVF
                     PVYRGDRVPRWKLALGLALYRVLAAGGNVPRPRIFGKAGMLSLEPNLRVRGLTGGGLY
                     HDAQCDDARLVIATIRSATRHGALALNYASVRGLVTEAGRLVGADVEDLAGEAGEGGR
                     ETAVIKASVIVNATGPWTDQVRRLEDPTASPLLRLTSGGHIVVRRSRLGHTRGITFTS
                     PVDGRVMFVLPMGDFSYVGTTDRDFEGDPAEVRLTDADRQYLLRSVNGLFPHAHLSEE
                     DVVSTWAGVRPLLAADPTAHPDAVSREHRIVRGPLGMVTVTGGKLTTFRRMAGEVVDQ
                     VFRHLGIEPRVAATETEPLVGGESAAWGSFLQGGVDLGIPAATIDHLVHHFGTEAAAI
                     INLVRTDRQLMHRIHPDHPAMAAEVVHVVRREMAVRVADVLSRRLHLTTETADGGRAA
                     ARPVAELMGREAGWSADRVEQEALRFETGDAAAKNSLESPPP"
     gene            3945..4430
                     /locus_tag="VGA78_14280"
     CDS             3945..4430
                     /locus_tag="VGA78_14280"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9895094.1"
                     /translation="MARGARVLDLACGAGRHSLAAAELGADVTAVDRDPARLELGRQA
                     AKSRHLTVTWLEWDLTQSFPPLGTFDVLLLFNYLDRARMPELLQYLRPGGYLLMETFL
                     VDQRAFDWGPTSDVHLLKRGELADLVAPLEILHGRESLEPVEGVHWSAVASILARRNV
                     E"
     gene            4433..>5366
                     /locus_tag="VGA78_14285"
     CDS             4433..>5366
                     /locus_tag="VGA78_14285"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX9895095.1"
                     /translation="MRSIPPNRRAVVVAGLRTPFARSGTIFKDASGVALARHAARELL
                     YRTELDGREVDEVIVGQVVASPLAPNVAREVSLLPQFPRTIPAYSLNRACSSGAQAVT
                     NAADQIGFGHADVVLAGGVENLSDIPILHSRRFSQVLVAASKAKSVGDRLRLFASVRP
                     RDLVPVSPAIAEPSTGESMGQSAERMAKENGISREEQDRYALMSHQRAAAGTADGRLT
                     AEIAPWFGGPDLSQVTRADNGIRSDTSLEALAELKPVFDRRYGTITAGNASPLTDGAS
                     MVLLMAAEKASALGYRPLVALRSYAVAAVDPAWQL"
BASE COUNT          863 a         1810 c         1825 g          868 t
ORIGIN      
        1 cgcgaactgg tcggcttctt gtgggccgtg atgcgcgacc tcgagccgcc atcggtgccg
       61 gtccactagc gggaagggac ggcgtgggtc tcggggaccg atcagggaga gcactcgaag
      121 gccgttatgc ggtcacgtcg cagtccaacg gaatccgtgc gcctagaacg agctcgctcc
      181 cgacgcatcc acttcgtgcc gctccggtgc cggacgcact gaccggcgaa tatcagcagg
      241 atgatcgtcg aagctgtctc gagcccccgt ggtctcctcc gtctgatgcc ttttgggaaa
      301 aaggagagcc catgccagcg tagccgacgt cgtcgctctt gacaacagcc cagtcatatc
      361 aacggcctgc atttcagcgc gcggccgaca gccgcaaatg ccggggttag gttgccccga
      421 gcgtgggtgg ctctgcgcgt gaggcgattc cccgtcgctt ggcagcggct accgccgccg
      481 tggccaaccc ggcgctcacc ccagcactga cacacccaga gctgccaagg gtgcccagac
      541 agcccggggg gccccgaaaa cccacccgag cccggcgaat aggatcgccg gagcccctcc
      601 gcccaagaga ccccacagcg caacgcgccc cggggctagg tcatctactt gccggccccg
      661 ttcgccgatc ggcgcccgag caagtcggtg cccaggtata tgcgctgccc atgcggtggg
      721 gtcgatagcg gcgtgtttac ctatggaagc cccgtcctcc tgagccaggc gacttgcctg
      781 cgttcgttct cctgctcgtc agcggtggcg cgtcggtcga tgacggcgtt cccggagtcg
      841 ttccttgtga catcgccgta acgaggtatc tgccgatagt cgaagccgtc gaggatcttt
      901 agtgcgaggt cggtaatcgt gttggtgacc gaagtcagag cagccgcccc gatgtcgggg
      961 cgtgcgtggc gtggcgatcc aagatagccc ggccagcccg cttgctccgc tgcgggaatg
     1021 agctcgctga tgctatttcc ggtgaacgag ggcgcctccg cgtagcctgg tgcgaccaag
     1081 tggggccgta ggaagaggtt gatgctggtc tcgacgagat ccgcgtgaac accgaagccg
     1141 ttctcagcac gctcggcttc ggtggcattc tgtgcagcgc ccgcataact gccgatcact
     1201 ggcatcaggc caaccaggtg gaccatctgt ccaccgtatg tgtcattgaa atagtcagcc
     1261 gcctggtcca gtgcccggct ctggttcggc cccaagtgaa aatggacgac aaagatgttg
     1321 cgaaaacctc cctcgccgag ttcagtggcc agatccatgt agaccgcgcg cagggtagtg
     1381 gatcgcaccg tgtagctgcc atcgaacgtg tacttgctac cgatttcatt cgcgggggcc
     1441 acgccgagtg gaatgagcgg gaacagaagt gccgtccatc ccggtctagc cgcgatcgcc
     1501 ctcgcgagcg cgtcggtgac gtgctcgctc acgtagccat cggcgaacga cggcaagtag
     1561 ggtccatgct cttccagtat cccgccgggc aatagcacga ccgtcttctc ccggtcgagg
     1621 gcacgaattt gctcagtgtt cctctccgcc acgtggtgga tctgggtggg gctgccggcc
     1681 tcgcctgccg ggggagtgct cccttccatg cagccagcga gtgaccaacc gagagcaagg
     1741 gcgggcgcaa gtctgtggcg catcgacggc tccagagtgc ggtattttag aagtagggcc
     1801 gatggaaagt ccggtcaact gtggggcgcg ccgatatcgc gacgacattg gtcgggcgga
     1861 gtcctggtgc tgctgcctag cggctcgcaa tgagcggcga gggcgctgaa gaagagcagt
     1921 ccggcggcgg tcccggagtc gatgagggtg aggatgtggg ggtgctcgag ctgggccgcg
     1981 atctcgatct cgcgcaggaa tcgctccgga cccagcgtcg cggccagctc cggcctgaga
     2041 accttgatcg cgacccgccg gtgatgcttg aggtcttcgg cgagaaacac gagcgccgtg
     2101 ccgcccgacc cgagctcgcg ctcgacgcga tagcggtccg cgagggcggc ggagatccgc
     2161 gagagaactg ggtccacccg gggccttgtc agggaacgac ccaagctacg ggatgcccgg
     2221 gaagtgtgct agggcggcgg cgattctaac gagttcttcg cggcggcgtc accggtctcg
     2281 aaccgcagcg cttcctgctc cactcggtcc gcgctccacc cagcctcgcg gcccatcagc
     2341 tcggccaccg ggcgcgcggc ggctcggcca ccgtcagcgg tttccgtagt caggtgcagc
     2401 ctccggctca gcacgtcggc cacccggacc gccatctcgc gccgtacgac atgcaccact
     2461 tcggcggcca tggccgggtg atcggggtgg atccggtgca tgagctgccg gtcggtccga
     2521 accaggttga tgatcgcggc ggcttcggtg ccgaaatgat gaaccagatg gtcgatggta
     2581 gcggccggaa tccccaggtc gactccgccc tgaagaaagc ttccccaggc cgccgattcg
     2641 cctccgacca ggggctcggt ctcggtcgcc gctacccgcg gttcgattcc caggtgccgg
     2701 aagacctggt cgaccacctc gcccgccatg cggcgaaagg tggtgagctt cccgcccgtc
     2761 accgtgacca tgccgagtgg gccccggacg atccggtgct ctcgggaaac ggcatccggg
     2821 tgagcagtcg gatcggcggc cagcaggggg cgcaccccgg cccaggtcga caccacgtcc
     2881 tcttcggaca aatgggcatg aggaaaaaga ccgttcaccg agcggagcag atactgccgg
     2941 tcggcgtccg tcaggcgtac ctcagccgga tcgccctcga aatcccggtc cgtggttccc
     3001 acataggaga agtctcccat ggggaggacg aacatcaccc ggccatcgac cgggctggta
     3061 aaggtgatgc cgcgggtgtg tcccagccgg gatcggcgca ccacgatgtg gccgccgctg
     3121 gtcaggcgaa gcagcggcga cgccgtgggg tcttccagcc gccggacctg atcggtccag
     3181 ggaccggtgg cgttcacgat gacggaagcc ttgatcactg ccgtctccct tcccccttct
     3241 cccgcctccc ccgcgaggtc ctccacgtcg gccccaacca gccgtccggc ctcggtaacc
     3301 aggcccctga ccgacgcgta gttcagggcc agggccccgt gccgcgtggc cgagcggatc
     3361 gtggcgatga ccagccgcgc atcgtcgcat tgggcgtcgt ggtagagtcc gccgccggtg
     3421 agcccgcgaa cccgaagatt gggttcgagc gacagcatgc ccgccttgcc gaagatgcgg
     3481 ggtcgcggca cattcccgcc ggcggccagc acgcggtata aggcgagacc cagggccagt
     3541 ttccagcggg gaacccgatc gccgcggtag acgggaaaga cgaaggccag ggaccggacc
     3601 aggtgaggcg ccaggcggag caggatggct cgttcgtgga gcgcctcgaa caccagacgc
     3661 cactgccgat gctccaggta tcgcaggccg ccgtggatca atcggctgga tcgggagctg
     3721 gtgccggctc cgaagtcggc ccgctcgacc agggccacct tgagaccgcg catcgcggca
     3781 tcccgcagga ccccggctcc ggtgatgccg ccgccgatga ccaggagatc gagctcccgt
     3841 gccgcgaggt cactgacccg ggcgcgaacc gaggccgtca tatttccgat tcccccgacg
     3901 ccgacagccg tcccagcacc tggttcgact ggcaccgcga tgtcatcgcg cggggtgccc
     3961 gggtgctcga tctggcctgt ggcgccggcc gacacagcct cgccgcggcg gagctcggcg
     4021 ccgatgtgac cgcggtggac cgcgatccgg ctcggctgga gctggggcgc caggccgcca
     4081 agagccgcca cctcacggtc acctggctgg agtgggacct gacgcagtcg tttccgccgc
     4141 tgggcacttt cgacgtgctc cttctgttca actatctgga tcgcgcccgc atgccggagc
     4201 tgctgcagta tctccggccg ggggggtatc tgctgatgga gacttttctg gtggatcaac
     4261 gcgcgttcga ctggggcccg accagcgacg tccacctgct caagcgcggc gagctcgccg
     4321 atctggtcgc tccgctcgag attctgcacg gccgtgaatc gctcgagccg gtcgaggggg
     4381 tgcactggag tgccgtggcc agcatcctcg cccgccggaa cgtagagtaa gcgtgcgcag
     4441 catcccgccc aaccgccggg ccgtggtcgt ggccggcctg cggacgccct ttgcccgaag
     4501 cgggacgatc ttcaaggacg cctccggcgt ggcgctggcc cgccacgcgg cccgggaact
     4561 gctctaccgc accgagctcg acggccggga ggtcgacgag gtgatcgtgg gacaggtggt
     4621 ggcgtcaccg ctcgcgccta acgtggcccg ggaggtgagc ctgctgccgc agttcccccg
     4681 gaccatcccg gcctactcgc tcaaccgggc ctgctcgtcc ggcgcccagg cggtgaccaa
     4741 cgcggccgac cagatcggct tcggccacgc cgacgtggtg ctggctggcg gggtggagaa
     4801 tctgtcggac atcccgatcc tgcattcccg gcggttcagc caggtgctgg tcgccgccag
     4861 caaggccaag tcggtcggcg accggctccg gttgttcgcc agcgtgcggc cccgggatct
     4921 ggtgccggtg tcgccggcga tcgccgagcc ctccaccggc gagtcgatgg gacagtccgc
     4981 ggaacggatg gccaaggaga acggcatcag ccgggaggaa caggaccgct acgcattgat
     5041 gagtcatcag cgcgccgcgg ccggaaccgc cgacggccgt ctcaccgcgg agattgcgcc
     5101 ctggttcggc ggccccgacc tgagccaggt gacccgggcc gacaacggca tccggtccga
     5161 cacctcgctc gaggcgctgg ccgagctgaa gccggtcttc gaccgccgct acggcaccat
     5221 cacggcggga aacgcctccc cgctgaccga cggcgcctcg atggtgttgc tgatggcggc
     5281 cgaaaaggcc tccgccctgg gctatcgtcc gctggtcgcg ctgcgcagct acgccgtggc
     5341 cgcggtcgac ccggcttggc agctgt
//
LOCUS       DASWKS010000506        12889 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_638003, whole genome shotgun sequence.
ACCESSION   DASWKS010000506 DASWKS010000000
VERSION     DASWKS010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12889
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_638003"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..1704)
                     /gene="sufB"
                     /locus_tag="VGA78_14290"
     CDS             complement(268..1704)
                     /gene="sufB"
                     /locus_tag="VGA78_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEX9895096.1"
                     /translation="MSDSVETLVNKEYKYGFVTDIEADVVPVGLTEDTIRLISFKKGE
                     PGWLLDWRLRAFRAWQKMDEPHHWANIKYPPVDYQSIVYYSAPKTAVPLGSLDELDPK
                     LRETYDKLGIPLSEQKLLAGVAVDAIFDSVSVGTTYKRQLGELGIIFCSFSEAVREHP
                     ELVRKYLGSVVPLTDNFFASLNSAVFTDGSFVYVPKSVRCPMDLSTYFRINQAGTGQF
                     ERTLIVADEGAWVSYLEGCTAPRRDENQLHAAVVELVALEGATIKYSTVQNWYAGDTE
                     GRGGVFNFVTKRGKAAKQAKISWTQVETGSAITWKYPSVILQGDDSVGEFYSVAVVNN
                     RQQADTGTKMIHLGKNTRSTIVSKGISAGRGNNSYRGQVKVMPNASGARNYTQCDSML
                     IGNRCGAHTFPYIDVQNRTAKIEHEASTSKIGEEQIFYLKQRGINTENAISMIVNGFC
                     KEVFKELPMEFAVEAQKLLGVSLEGSVG"
     gene            complement(1736..2470)
                     /locus_tag="VGA78_14295"
     CDS             complement(1736..2470)
                     /locus_tag="VGA78_14295"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9895097.1"
                     /translation="MTSSTPASETQTGGAPSGLKGPRADVVLALKRSGGLTARELADR
                     LHLSLNAVRHHLKELEVAGLVRYDRQHQSVGAPSFRYRLSATGETLFPRRYEDAVARL
                     LDHVVAHEGRAAAVEVLEARYRELAVTLRSALADASPEERLQAVARTLADEGYMPEVR
                     PGGAPGLPMLVEHNCPMQQVALKFPELCEAEARFLAEVLEAEVTREAHIASGCGACEY
                     VVTPKIAENSKPGTVNSAQELLPVHR"
     gene            2699..3271
                     /locus_tag="VGA78_14300"
     CDS             2699..3271
                     /locus_tag="VGA78_14300"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX9895098.1"
                     /translation="MTIHRIRLLGDPALYTRCETIARPRSAAVRVVVDDLRETLRDAQ
                     SRFGMGRAISAPQIGAPVRIVYAEMGRPLTLINPEIVEVGSEDFPVWDDCYSFPNLFV
                     RVLRAYRIRIRYQDGKGETHEVDLERDMAELLQHEIDHLDGVLAVDRQHGPHPLALRE
                     EWNRMYTEAHRYGAPEPRVAQVGPMSGALL"
     gene            3435..4109
                     /locus_tag="VGA78_14305"
     CDS             3435..4109
                     /locus_tag="VGA78_14305"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9895099.1"
                     /translation="MIVSFPTDGSTASGYLAIPEAGTGPGLLVLQEWWGLVDHIRDVC
                     DRFAAEGFVALAPDLYHGKQATSPDQAGKLFMALNIAQAGRELRGAADYLLGHPAVEP
                     KRVGVVGFCMGGQLALYAAQEQGDRLACAVNFYGIQPRVEIDPARVRIPVQGHFGRQD
                     KSVPIERATALARAVQSAGGSFELHEYEAGHAFFNDTRTQVYDPVAAEQAWQRTVGFL
                     KNHLAV"
     gene            4223..4543
                     /locus_tag="VGA78_14310"
     CDS             4223..4543
                     /locus_tag="VGA78_14310"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9895100.1"
                     /translation="MTYGATLVALADPTRRTIFERLRHQSHTVGELARLTKVSQPGVS
                     QHLRVLRRARLVTHAQLGTRRYYRANREGLVALRRYVEALWEDVLTAYAAADPSPPRR
                     GTPQ"
     gene            4540..5109
                     /locus_tag="VGA78_14315"
     CDS             4540..5109
                     /locus_tag="VGA78_14315"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9895101.1"
                     /translation="MTRQLDIPIPPVRRAISVSWDPAAAFHRFTAEFGDWWPRATHSI
                     GGKRVERIVFECWVGGGIIEELNDGRRFQWGKVTEFEPPHRVSFTWHPSREESQAQDV
                     EIRFTPEGSGTRVELSSTGWERLGVKGGRARKGYHIGWGSVLDVFAGRRSAAIVIFGL
                     ISGAMTLALRLTGKLEQAIDQAGGRLPAR"
     gene            5861..6463
                     /locus_tag="VGA78_14320"
     CDS             5861..6463
                     /locus_tag="VGA78_14320"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9895102.1"
                     /translation="MQSRAAVIFALLGAGLTPAAASAQERQIRVAVTVAATPEQVWPL
                     WTTDQGVRSFFAPGSHIELRVDGAYEIFFDPAAPAGLRGADGMRLLAVEPNRRLAFTW
                     NAPATLPYARAQRTVVTVDFATVGKDSTRVTLRHIGWGTGPEWDEAIRYFEPAWNGFV
                     MASFKRRMEHGPIDWKALPNLEPVQKTAIEYLAAQNQGDR"
     gene            6470..6904
                     /locus_tag="VGA78_14325"
     CDS             6470..6904
                     /locus_tag="VGA78_14325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895103.1"
                     /translation="MVDLLRHHGLAALIAGLGLGLGARIVMRVIAWSAGLPGSFSSGG
                     SLEVVVFGALIGWPVGLTFYALRHRIRSRLPWPGLLLGGGLFLAFALVPPGSARSALA
                     GTPDPPLLTGLLFLILFLLFGASLEWRWARWRRRRGPLTIDN"
     gene            complement(7010..9691)
                     /locus_tag="VGA78_14330"
     CDS             complement(7010..9691)
                     /locus_tag="VGA78_14330"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895104.1"
                     /translation="MGLIEGFGARLRSLFGRRMVERRMDAEFQFHLDMEAEQNIRRGL
                     SPAEARRRAVIAFGGTQQYREAMREGRGLSLGREMLGDARLSLRMFRREPTFSGSVVL
                     TLALAIGATTAVFTLVRRAVIDPLPYPRAGELVSLTTRYAGWGVSYGAVSEPEVSDLA
                     AMDETFESVAAYRLGPVDLAGDDGEQAERVVGLQASASLFQVLRVAPVLGRAFLASED
                     LPNAPPAVLLTHGLWRQLGADSSLVGRELRLNAVPHTVLGVLHPSFELAGAAVVRPLR
                     LNPAEPESRGAHYLRVIGRLAPGVSGERARLALEVVSARLRQDHPQNYRADMQWSLVG
                     QSLRDSVLGDARDVLRMLTGAVVLVLLIACANVANLLLARMQRRERELALRTALGAGR
                     GRLVRQLLTEGLVLALAGTAAGVVIATLGAGALLSLSPGAIPRVNRLEIDPGMLSTAV
                     ALAGGSALLFGLAPALKGTRHATGAWRGWGSRGTSAEGWGGGGRRFMASLVSLEVALA
                     MLVVISAGLLLRSYARLSRVDLGFTPANVLAFDVTLPELAYGTPAAVTGFYQRLLDRL
                     EHLPSAERAGGILSLPLRSGTGSIDIELEGRPPEPGQSAPSPNLQVVTPGYFEAMRIP
                     LLQGRFPAPSDDAEAPVAAWVNQAAADRLWPGEGALGKRFRLAGDTGSTWFTVAGVVG
                     NVRTIAATREPGWEYYLAHAQLRRVLDVSDFHRGLSIVVRSSTDPGSLAGPARRILAE
                     MDQRVAPAQVETMTAVSSRAIARPRLVASLLGAFALLAGVLALVGIYGVLSYAVSRRT
                     REIGIRMALGARSAQVVRLMAGQGLGAAGIGIVLGAAAAFATGRLFATLLFGIGPRDP
                     VVFAGSAAGLAVVALAAALIPARRAARVHPANTLRED"
     gene            complement(9713..10048)
                     /locus_tag="VGA78_14335"
     CDS             complement(9713..10048)
                     /locus_tag="VGA78_14335"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9895105.1"
                     /translation="MPVSHQTDALRGSLDLLILKALSLTPAHGWGIGQRIQQISRDAL
                     SANQGSLYPALQRLEHRGLITSDWADSENNRRARYYKLTAAGRAALRAEVESWRRFAA
                     AVELALSAG"
     gene            complement(10286..11746)
                     /locus_tag="VGA78_14340"
     CDS             complement(10286..11746)
                     /locus_tag="VGA78_14340"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEX9895106.1"
                     /translation="MSAATRARVIAQAAGPALFVLVLLVAPAQLQPGGARVLGLAAWM
                     GVWWVTEAVPLAATSLLPIVLLPLLGVRTAREATEPYGNELIFLFLAGFVLAAALERW
                     HSHARFAYGLVGTIGTSSRRVVLGVMVATGFVSMWISNTATAAMMFPITVAIGALFGD
                     DRAGQRTRMALLLGMAYAASIGGMATLIGTPPNLVVAGAIREATGQAVDFGRFMLLGL
                     PLTLVLLPLTWALLVFVVFRGGATLDPGAREVIAERRRTLGPLRGGERVVITVFVLTA
                     LAWFFREPKDFGGFTIPGLTMLAPRLTDTGIGILAAVLLFTLPGRSPDGTMRPLLRWE
                     EARGLPWDVLLLFGGGLSLAAAMDSSGLTAWIAQRLVGLRGLPLPLLFLGIAVVVVAL
                     SELASNTAVATMMMPLTISLAAAVDQPPVVLMLVAGFSASLGFALPVATPPNAIIFGS
                     GQIPMREMVKAGLVIDLCGILVVALLLSLLTPIVLS"
     gene            11825..>12889
                     /locus_tag="VGA78_14345"
     CDS             11825..>12889
                     /locus_tag="VGA78_14345"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895107.1"
                     /translation="MRWTILFLACISPPILAGQQPSVPADQRVRIDSVFATWDRTNSP
                     GCALGIDRGGTTIYERGYGMSNLETGQAITPTSIFHVASISKQFAAASVALLASRGQL
                     SLDDDIRKHVLEIPAYATPITVRHLIHHTSGLRDQWVLLRMAGWRQEDLITEDDVLWV
                     VSRQKGVNFKPGDEYVYSNTGYTLLGTIVKRVSGKSLREFADAEIFRPLGMSDTHFHD
                     DHAMVVPGRTSAYVRAGDAWRVSIPDFDTYGATSLFTTVRDLLKWEHNFATGRVLGAE
                     LLTQMQQPIRLNDGTESPYGFGLVQGQHRGLRTVGHGGADHGYRADVIRFVDHDLSVA
                     ALCNLGNINPSGLTRRVGEIL"
BASE COUNT         2237 a         4295 c         4289 g         2068 t
ORIGIN      
        1 aagcatcgcc atgtggtagt cgtccgtcag ttatcggttc gccctggcca ggggaacggg
       61 gcgccatgtg agggtcgcaa tccggggacc cgcgatcccg ttccaagcgg cctcgagagg
      121 agcccggctg aggccggtgc gcggctgcgg cggccgacgc ggggctcagt acgcgggagc
      181 aaaagtcaat ctcccacgag agcgaattcc ccgcgcacga tggccccgcg gaggccgccg
      241 cagccgcgcg ccggcctcag cgagagacta gccaaccgac ccctccagcg atacgccgag
      301 cagcttctgg gcttcgacgg cgaattccat cggcagctcc ttgaacactt ccttgcagaa
      361 cccgttcacg atcatcgaga tggcgttctc ggtgttgatc ccgcgctgct tcagatagaa
      421 gatctgctcc tcgccgatct tcgaggtcga cgcctcgtgc tcgatcttgg cggtgcgatt
      481 ctgcacgtcg atatagggga acgtgtgggc cccgcagcgg ttcccgatca gcatcgagtc
      541 gcactgggtg tagttccgcg ccccggatgc gttgggcatc accttcacct gcccccggta
      601 gctgttgttg ccgcggccgg cggaaatacc cttcgacacg atggtgctcc gggtgttctt
      661 ccccagatgg atcatcttgg tgccggtgtc ggcctgctgc cggttgttca ccaccgccac
      721 cgagtagaac tcgcccaccg agtcgtcgcc ctggaggatg acgctggggt atttccaggt
      781 gatggccgag ccggtttcca cctgggtcca gctgatcttg gcttgcttcg cggccttgcc
      841 ccgcttggtg acgaagttga agaccccgcc ccggccctcg gtatcgccgg cgtaccagtt
      901 ctgcaccgtc gagtacttga tggtggcgcc ttccagcgcc accagctcca ccaccgcggc
      961 atgcagctgg ttctcgtccc ggcggggcgc ggtgcagccc tccagataac tgacccaggc
     1021 gccttcgtcg gccacgatca gggtgcgctc gaactggccg gtgccggcct ggttgatccg
     1081 gaagtaggtg gacaggtcca tggggcaacg gacgctcttg ggcacgtaca cgaaggaccc
     1141 gtcggtgaag accgccgagt tgagcgaggc gaagaagttg tcggtgagcg gcaccacgga
     1201 accgagatac tttcgcacca gctccggatg ctcccgcacc gcctcggaga agctgcagaa
     1261 gatgatgccc agctccccca gttgccgctt gtaggtggtg ccgaccgaca ccgagtcgaa
     1321 gatggcgtcg accgccacac cggccagcag cttctgctcc gacagcggga tccccagctt
     1381 gtcgtaggtc tcacgcagct tggggtcgag ctcgtcgagc gagcccagcg ggaccgccgt
     1441 cttgggcgcg gagtaataca cgatcgactg gtagtcgacc ggcggatact tgatgttggc
     1501 ccagtgatgg ggctcgtcca tcttctgcca ggcccggaag gcgcggagcc gccagtcgag
     1561 cagccacccc ggctcgccct tcttgaagga gatcagccgg atggtgtctt cggtgagccc
     1621 caccggcacc acgtcggctt cgatgtcggt gacgaagccg tacttgtatt ccttgttaac
     1681 taacgtttca accgaatcgc tcataccagt ctcagctcaa ttctttggtg aacagtcaac
     1741 ggtgaaccgg caacagttcc tgtgcactgt tcacggttcc cggtttactg ttttccgcga
     1801 tcttgggagt gaccacgtat tcgcaggccc cgcacccact cgcgatgtgc gcctcgcggg
     1861 tgacctcggc ctccaacacc tcggccagaa accgggcctc cgcctcacac agctccggga
     1921 acttcagggc gacctgctgc atcgggcagt tgtgctccac cagcatcggc aggccgggtg
     1981 cgccgccggg gcggacttcg ggcatgtacc cctcgtccgc cagggtccgg gccaccgcct
     2041 ggagccgctc ctcgggagag gcatcagcca gcgcgcttcg aagcgtgact gccaactccc
     2101 ggtatcgggc ctccaggacc tccaccgccg ccgcccgtcc ctcgtgggcc accacgtgat
     2161 ccagcaggcg agcgaccgcg tcctcgtaac ggcgtgggaa cagtgtctcg ccagtggcgc
     2221 tcaggcggta gcggaacgaa ggggcgccca cgctctggtg ctgccgatcg taccggacca
     2281 gtccggccac ctccagctct ttcaggtggt gccggaccgc gttgagcgac agatgcagtc
     2341 ggtcagccaa ctcgcgggcg gtcagcccgc cggagcgctt gagcgccaag accacgtcgg
     2401 cccgcgggcc tttgaggccc gaaggggctc cgcctgtctg ggtttcggac gcaggggttg
     2461 agctcgtcat cgcttcaaat cctactctag aatgacggaa agtcaacgtt tgtttggtgt
     2521 ttttggtctg aatatataag tatctgtcta acatcgattt agatcgccag tcaccgagca
     2581 gttttcgacc tcggccggag ccatcctgca gtcgtggacg gttggattcg ccagccagcg
     2641 acagccgacc aggcactgca cagttgacag agtgaggctg aggcccggaa ttggacgcat
     2701 gaccatacac cgaatccgcc ttctgggtga cccggctctt tacacccggt gcgagacgat
     2761 agccaggccg cgttccgccg ccgtaagggt tgtggtggac gacctgcggg agacgctgcg
     2821 ggatgcccaa tcacggttcg ggatgggccg ggcgatctcg gccccccaga tcggggctcc
     2881 ggttcgcatc gtgtacgccg agatgggccg gcccctgacc ctgatcaacc cggagatcgt
     2941 ggaggtcggc agcgaggatt ttccggtctg ggacgactgc tactcctttc ccaatctgtt
     3001 cgtccgggtg ctgcgggcct atcggatccg gatccgctac caggacggga agggcgagac
     3061 gcacgaggta gatctggagc gcgacatggc cgagctgctc cagcacgaaa tcgaccacct
     3121 ggatggggtc ctggcggtcg accgccagca cggcccccat cccctggcgc tgcgcgagga
     3181 atggaaccgg atgtacaccg aggcccaccg ctatggggct ccggagccgc gggtggcaca
     3241 ggtgggaccg atgagtggcg cacttctttg aggtgagagg gaggaggggg gaggggggag
     3301 gggggagtga atgcagagtg accaatgccc aattcccatt gaagagggtt ctgccctctg
     3361 ccctacttct gccatgggca ttgggcattg ggcactctcc agttcactcc cccctcctac
     3421 ctcaccattc aagcatgatt gtttcctttc ctactgacgg ttcaaccgcc tccggctacc
     3481 tcgcgattcc cgaagctgga acgggacctg gtctgttggt ccttcaggaa tggtggggcc
     3541 tcgtcgatca catccgcgac gtgtgcgatc gcttcgcggc tgaggggttc gtggcgctgg
     3601 cgccggatct gtaccacggc aaacaggcga ccagtcccga tcaggccggg aagttgttca
     3661 tggcgctcaa catcgcgcag gccggccggg agctccgcgg cgccgccgat tacctgctcg
     3721 gtcatccggc ggtcgagccc aagcgggtcg gcgtggtggg cttctgtatg ggcgggcagc
     3781 tggcgctcta tgccgctcag gagcagggcg accggctcgc ctgcgccgtg aatttctacg
     3841 ggatccaacc gcgggtggag atcgatccgg cccgggttcg cataccggta cagggtcact
     3901 tcggccggca ggacaagtcg gtcccgatcg agcgggccac cgccctggcc cgggcggtgc
     3961 aatcggccgg cggctccttc gagcttcacg agtacgaggc gggacacgcg ttcttcaacg
     4021 acacccggac ccaggtctac gatccggtgg cagcggagca ggcctggcag cgcaccgtgg
     4081 ggtttctcaa aaaccatctg gcggtttagc gattcatcgc tttagcgatt ttgcgggggc
     4141 tcaaccgctg aatctctaaa gcgtcaaatc gtcaagggcc gttcccgctt gacgccagaa
     4201 taagtgttca gtaatataat ttatgactta tggagccacc ctggtcgcgc tggccgaccc
     4261 gacccggcgc accatcttcg agcggctgcg gcaccagtcg cacacggtgg gcgagctggc
     4321 ccgtctcacc aaggtgagcc agcccggcgt gtcgcagcat ctccgggtgc tgcggcgggc
     4381 ccggctcgtc acccatgccc agctgggcac ccggcgctac taccgcgcca accgcgaggg
     4441 cctggtggcg ctccgccggt acgtggaggc gctctgggaa gacgtcctga cggcctacgc
     4501 ggcggccgac ccgtcgcctc cccggcgagg caccccccaa tgacccgaca gctcgacatc
     4561 cccattccac cggtccggcg cgcgatctcg gtgtcgtggg atcccgccgc ggcctttcac
     4621 cgcttcacgg ccgaattcgg cgattggtgg ccccgagcga cccattccat cggagggaag
     4681 cgggtcgagc gcatcgtgtt cgagtgctgg gtgggcgggg gcattatcga ggagctgaac
     4741 gacggccgcc gctttcaatg gggcaaggtc accgagttcg agccgcccca ccgggtgagt
     4801 ttcacctggc atccctccag ggaggagtcc caggcccagg acgtcgagat ccggttcacg
     4861 ccggagggga gcggcacccg ggtcgagctg tcgtccaccg gctgggagcg actcggcgtc
     4921 aaagggggtc gcgcgcggaa gggctaccac atcggctggg gctcggtgct cgacgtcttc
     4981 gccggccggc ggagcgccgc catcgtgatt ttcggactca tctccggggc tatgaccctc
     5041 gccctccggc tgaccggaaa actcgagcag gccatcgacc aggccggcgg ccgcctgccg
     5101 gcccgctaaa cggattgtga aagccactga cgattgacaa ttgatgattc acgattgctc
     5161 atcgaagccc gagttgagca attgtcaatc gtcaatgagg tttcagaacc atcatgcagg
     5221 cgtgagccgt ttctcaaaca gcaggtattg gttgcagtct atcggcgcca tcggagtcat
     5281 cggtggatga tcatcgacca gaaatccgaa tgacaccgcc gcgttccatg tgacgccgag
     5341 gcccggagct tgagccgggg ttaatctgca gatgacgggg atgccgccga tgactcctct
     5401 cgggtcagaa tgccttgaac cgccagagag tcgttctttc aaaaaggttc ttctcggaat
     5461 ttcgggtccg ggcggttgct gaatttcttg aagcggggca ataaagctcc cacggatgac
     5521 acgggttcac ctggatgaca cgaactcgag ccaagatcac acggtaggaa gcctctctga
     5581 ggtggcgcaa tccgtgtcat ccccgtaatc cgtgtcatct gcggatgctt tttgcagttt
     5641 gtttttgagg atccgcgcgg cgttcccccg gaattcctcg gcgagccttc aaaaagcagg
     5701 tattggttgc ggtttatcgg cgccatcggc gtcatcggcg gatgatcacc aaccagaaag
     5761 ccgatgcgcc ggcgggatgg gtatatatat gcgtatttcc taatataatg tgtcacttat
     5821 gacaaaaatc aactcacgca atcctcaatt ggaggtggag atgcaatcga gggcagcagt
     5881 aatcttcgcg ctgctcggcg cggggctgac gccggcagcc gcgtcggccc aggagcggca
     5941 gatcagagtg gcggtgaccg tggcggcgac tccggaacag gtctggcccc tctggaccac
     6001 ggaccagggg gtccggtcct tcttcgcgcc gggcagccac atcgagctca gggtcgatgg
     6061 ggcctacgag atcttcttcg acccggccgc gccggccgga ttgaggggcg ccgacgggat
     6121 gcggttgctg gcggtggaac cgaaccggcg gctggcgttc acctggaatg cgccggccac
     6181 cctgccctac gcgcgagccc agcggaccgt ggtcaccgtg gatttcgcga cggtggggaa
     6241 ggacagcacc cgcgtcaccc tgcggcacat cggctggggc accgggccgg agtgggacga
     6301 ggcgatccgg tactttgagc cggcctggaa cgggttcgtc atggcgtcct tcaagcggcg
     6361 gatggagcac ggacccatcg attggaaagc actacccaac ctcgagccgg tgcagaagac
     6421 ggcgatcgag tatctcgcgg cgcagaacca gggagaccga tagccttccg tggtggacct
     6481 cctgcgccac cacggtctcg cggcgctgat cgccggactc gggctcggcc tcggcgcccg
     6541 gatcgtcatg cgggtaatcg cctggagcgc gggtttgccg gggtcgttct cctccggcgg
     6601 ctcgctcgag gtggtggtat tcggagcact gatcgggtgg ccggtcgggc tcacgttcta
     6661 tgcattgcgg caccggattc gaagccgact cccctggcca ggcctcttat tgggcggggg
     6721 acttttcctg gcgttcgccc tggtgccgcc gggctccgcc cgcagcgcgc tggccggcac
     6781 ccccgatccg ccactgctaa ccggactcct tttcctgatc ctgttccttc tttttggcgc
     6841 gagtctggag tggcgctggg cccggtggag gcggcgccgc gggccattga cgattgataa
     6901 ttgatgattc acgattgctc attgaagccc gagcggagca attgtcaatc gtgaattgtc
     6961 aatcgtcaat gagctttcag aaccatccca caggcagaac tccccgctcc tagtcctccc
     7021 gcaacgtgtt cgccggatgc acccgcgccg cgcggcgggc ggggatcagg gcggcggcca
     7081 gagccacgac ggccagcccg gcggcgctgc cggcaaacac caccgggtcc cggggcccga
     7141 taccgaacaa cagggtggcg aacaaccggc cggtggcgaa cgccgccgcg gcacccagca
     7201 cgattccgat accggcggca ccgagtccct gtcccgccat caaccgcacc acctgggcgc
     7261 tccgcgcgcc cagcgccatg cgaattccga tctcgcgggt tcggcggctc accgcgtagc
     7321 tcagtacgcc gtagatcccc accagcgcga ggaccccggc cagcagagcg aacgcgccca
     7381 gcagcgaggc caccagccgg ggccgcgcga tggcgcgcga gctcaccgcc gtcatggttt
     7441 ccacctgggc cggggccacc cgctggtcca tttccgccag gatccgccgg gccggccccg
     7501 ccagcgagcc gggatcggtc gatgaccgaa ccacgatgga caacccgcga tggaaatcgc
     7561 tcacgtccag cactcggcgt agctgggcat gcgccaggta gtactcccac ccgggctccc
     7621 tggtcgccgc gatggtgcgc acgttgccca ccacgcccgc gaccgtgaac caggtgctgc
     7681 cggtgtcacc ggccaggcga aagcgcttgc ccagcgctcc ctcgcccggc cacaggcggt
     7741 cggcggcggc ctgattcacc caggccgcga ccggcgcttc cgcatcatcg ctcggggctg
     7801 ggaagcgtcc ttgcagcagc gggatccgca tcgcctcgaa gtagcccggc gttactactt
     7861 gcaggttagg cgaaggcgcc gattgccccg gctcgggcgg acggccctcc agctcgatgt
     7921 cgatgctgcc ggtgccactc cggaggggca ggctgagaat ccccccggcg cgctcggcgc
     7981 tcgggaggtg ttccagccgg tcgaggaggc gctgatagaa ccccgtgacg gcggcggggg
     8041 ttccgtacgc caactccggc agagtcacgt cgaaggcgag cacgttggcc ggcgtgaacc
     8101 ccagatccac ccgggacagc cgggcgtagc tccggagcag cagtccggcg gatatcacca
     8161 ccagcatcgc cagcgccact tcgagcgaca ccagggatgc catgaaccgg cgccccccgc
     8221 cgccccagcc ttcggcgctg gtcccacggg agccccaccc acgccacgcc ccggtcgcgt
     8281 gccgggtgcc cttgagcgcc ggtgcgagcc cgaagagcag cgcgctgccg cctgccagcg
     8341 cgacggcggt gctcagcatg cccgggtcga tttccagccg attcacccgg ggaatggctc
     8401 cgggcgagag cgagaggagc gcgcccgcgc ctaacgtggc gatgacgacc ccggccgcgg
     8461 tacccgccag cgccagcacc aacccctcgg tcaggagctg ccggaccagc cggccgcgtc
     8521 ccgcgcccag cgcggtccgg agggccagtt cccgctcccg gcgctgcatc cgcgccagca
     8581 ggaggttggc gacgttggcg caggcgatca gcagcaccag caccaccgcg ccggtcagca
     8641 tccgaagcac gtcgcgcgca tcgcccagca cggaatcgcg gagcgactgc ccgaccagcg
     8701 accactgcat gtccgcccgg tagttctggg ggtggtcctg ccgcagccgg gccgacacca
     8761 cctcgagggc caggcgggcc cgctcgcccg acacgccggg ggcgagccgg ccgatgaccc
     8821 ggaggtagtg ggcgccgcgg gattcgggct ccgccggatt gagccggagg ggacggacca
     8881 cggcggcccc ggccaactcg aacgacggat gcagcacccc gagcacggtg tgcggcaccg
     8941 cgttcagacg cagctcccgc ccgaccagag aggaatcggc gcctaactgt cgccacagtc
     9001 cgtgggtcag cagaaccgcc ggcggggcgt tcgggagatc ttccgaggcg agaaaggccc
     9061 ggcccagcac gggggccacc cggagcacct gaaagagaga ggcggaagcc tggagcccga
     9121 ccacccgctc ggcctgctct ccgtcatcac ccgccagatc caccgggccc aaccggtagg
     9181 ccgccacgct ctcgaaggtt tcgtccatcg ccgcgagatc gctcacttcg ggttcggaca
     9241 ccgcgccgta ggagactccc catccggcgt agcgggtcgt aagcgacacc agctctccgg
     9301 cccgggggta cggcagcggg tcgatcaccg cccggcgtac cagggtaaac accgccgtgg
     9361 tggcaccaat ggcgagggcc agcgtgagga ccacagaccc gctgaaggtc ggctcgcgcc
     9421 ggaacatgcg aagcgacagc cgtgcatcac cgagcatctc ccgccccagg ctcaggcccc
     9481 gcccctcccg catcgcctcc cggtattgct gggtgccgcc gaacgcgatc accgcccggc
     9541 ggcgggcctc cgcgggcgac aggccgcggc gaatgttctg ctccgcctcc atgtcgaggt
     9601 ggaactggaa ctcggcgtcc atccgccgtt ccaccatgcg gcgcccgaac agcgagcgga
     9661 gccgcgcccc gaagccctcg atcagaccca cggcgtttcc tcgtcgtctc cgtcagccgg
     9721 cggaaagcgc cagctcgacg gccgccgcaa accgccgcca actctccacc tcggcccgga
     9781 gcgcggcccg tcccgcagcg gtcagcttgt agtagcgggc ccggcggttg ttctcgctgt
     9841 cggcccagtc gctggtgatg agaccgcggt gctccagccg ctgcagcgcg gggtagagcg
     9901 agccctgatt ggcggagagc gcgtcgcggg agatctgctg gatccgctga ccaatgcccc
     9961 agccgtgggc cggggtgaga ctcagcgcct tgaggatgag cagatcgagg gagccgcgga
    10021 gggcgtcggt ctgatgagac accggcatgg gaaccgcctg ggcgacaggt ctcttctcgg
    10081 tttctagaga agaatgcccc ggcttcctgt cgatgtcaag aagagggagc agggagcagg
    10141 gagcagggag caggaagcag gaagcaggaa gcagggagca gggagcagga agcaggaagc
    10201 agggagcagg gagcagggag caggaggcag gaaacaggcc ctcatcgctc gaccttgctg
    10261 cttcccgcct ccctgctccc tgcttttatg aaaggacgat cggcgtgaga agggaaagca
    10321 gaagggcaac caccagaatc ccacagaggt cgatgaccag ccccgccttc accatctccc
    10381 gcatggggat ctggccggag ccgaagatga tcgcgttggg cggagttgcg accgggagtg
    10441 cgaagcctaa cgaggccgag aagccggcga ccagcatcag caccacggga ggctgatcca
    10501 ccgcggccgc cagggagatg gtcaggggca tcatcatggt ggccacggcg gtgttgctgg
    10561 ccagctcgct cagggccacg accaccaccg cgatgccgag aaacaagagc ggcagcggca
    10621 ggccgcggag tcctaccagc cgctgggcga tccaggcggt gaggccggag gagtccatcg
    10681 ccgcggcgag cgacagtccg ccgccgaaga ggagcagcac gtcccagggg agaccccgcg
    10741 cctcctccca gcggagcagc ggccgcatag tgccatccgg cgagcggccc ggcagcgtga
    10801 agagcaggac cgccgccagt atcccgatgc cggtatcggt gagccggggc gcgagcatcg
    10861 tcagacccgg aatggtgaag cccccgaaat ccttgggctc gcggaagaac caggccaggg
    10921 cggtgagcac gaataccgtg atcaccaccc gttcgccgcc ccgcaacggc cccaatgtcc
    10981 tgcggcgctc cgcgatgacc tcacgcgccc cgggatcgag ggtggcgccg ccccggaaaa
    11041 ccacgaatac cagcagggcc caggtcagcg gcaggaggac cagcgtcagg ggcaggccca
    11101 gcagcatgaa gcgaccgaaa tccaccgcct ggccggtggc ctcgcgaatg gccccggcca
    11161 ccaccagatt gggcggagtg ccgatcaacg tcgccatccc accgatggag gcggcgtagg
    11221 ccatgccgag cagcaaggcc atgcgggtgc gttgccccgc ccggtcgtct ccgaacaacg
    11281 ctccgatcgc gacggtgatc ggaaacatca tcgcggcggt ggcagtgttg gagatccaca
    11341 tggagacgaa accggtcgcg accatcaccc caagaaccac ccggcggctg ctggtcccga
    11401 tggtgcccac caggccgtag gcgaaccggg cgtgactgtg ccaccgttcc agcgccgcag
    11461 ccagaacgaa gccggccagg aacaggaaga tcagctcgtt gccgtagggt tcggtggcct
    11521 cgcgggcggt tcggaccccg agcagcggca acagcacgat gggcaggagc gaagtggccg
    11581 cgagcgggac ggcttccgtc acccaccaga ctcccatcca ggcggccagg cccaacaccc
    11641 gggccccccc cggttggagc tgggcggggg cgacgagcag gaccaggacg aagagggcgg
    11701 ggccggcggc ctgggcgatc acccgggcgc gggtggcggc ggacattggg gaacaaacat
    11761 aaggcggtcg aaggcggtcg aaggcggtcg aaggcagtcg aaggcggtcg aaaggggttc
    11821 tcccatgcgt tggacaattc tgtttctggc gtgcatctcg ccgccgatcc tggccggaca
    11881 acagccctct gtccccgcag accagcgggt ccgaatcgac tcggtcttcg cgacctggga
    11941 tcggaccaac tcgcccggat gtgcgttagg gatcgatcgg ggtgggacca cgatctacga
    12001 gcgcgggtat gggatgtcca acctggagac cggacaggcc atcaccccta cctccatctt
    12061 ccacgtggcc tcgatctcca agcagttcgc agccgcgtcg gtggcgctgc tggcgagccg
    12121 gggccagctc tcgctcgacg atgacatccg gaaacacgtg ctggaaatcc cggcctacgc
    12181 cacgcccatc acggtccgcc atctgattca tcataccagc gggctccggg accagtgggt
    12241 gctgctccgg atggccggct ggcgccagga agacctgatc accgaggacg atgtgctgtg
    12301 ggtggtctcg cgccagaagg gggtcaactt caagccgggc gacgaatacg tctacagcaa
    12361 taccggctat accctcctcg gcaccatcgt caagcgggtg agcggcaagt cgctccgcga
    12421 gttcgccgac gccgagatct tccggccgct ggggatgtcc gacacccact tccacgacga
    12481 tcacgccatg gtggtgccgg gacgcacctc ggcgtacgtg cgggcgggcg atgcctggcg
    12541 ggtgagtatt ccggacttcg atacctacgg cgccaccagc ctcttcacca cagtgcgcga
    12601 tctgctcaag tgggaacaca acttcgccac cggccgggtg ctgggggccg agttgctgac
    12661 ccagatgcag cagccgatcc gcctcaacga cggcaccgaa tcgccctatg gcttcggcct
    12721 ggtccaggga cagcatcgcg gtctgcggac ggtcggacac ggcggcgcgg accacggcta
    12781 tcgggccgat gtcattcgct tcgtggatca cgacctgtcg gtcgcggccc tttgcaacct
    12841 cgggaacatc aatccgtcgg gattgacccg tcgggtgggc gagattctg
//
LOCUS       DASWKS010000507         3840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1016628, whole genome shotgun sequence.
ACCESSION   DASWKS010000507 DASWKS010000000
VERSION     DASWKS010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3840
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016628"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VGA78_14350"
     CDS             <1..345
                     /locus_tag="VGA78_14350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012607273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEX9895108.1"
                     /translation="PDAPDPAAPKTTWVHWVVYNIPAAVDALLENASRRRMPAGAKEG
                     LNDWKRPGYQGPCPPIGRHRYFHKVYALDTTLPDLGPVTKSQLEAAMRGHVLERAELI
                     GTYQRSASPNRS"
     gene            371..1099
                     /locus_tag="VGA78_14355"
     CDS             371..1099
                     /locus_tag="VGA78_14355"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9895109.1"
                     /translation="MKLVFLGTRGYVDVRTRRHHNHSALEVRYRGRRVLIDCGEDWLG
                     RLERLRPHAVVLTHSHPDHAFGLRNGAPGPVYATRDTWRSLERFPIADRHRIDLRRPR
                     PIESLIFEAFGVEHSVRAPAVGYRITAGSVVIFYAPDLVYIREPAMALRNAKLYIGDG
                     ATLTRPLIRRRGKHLIGHTPVRTQLSWCQRAGVPRMIITHCGTQIVERDGSQLRSEIR
                     RMGQERGVQAEIAFDGLEVQLRSR"
     gene            complement(1116..2111)
                     /locus_tag="VGA78_14360"
     CDS             complement(1116..2111)
                     /locus_tag="VGA78_14360"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEX9895110.1"
                     /translation="MPILGFLGDVMLGRGVDIELRRRPPESLWGTVGPVLRSADTVFA
                     NLECAITSHIQEWRQTPKVFHFRASPAAIDVLRAGNIGCVSLANNHTLDFEVEGLLDT
                     LRLLDQAGIAHAGAGRNLAEAQQPALVDVAGLRVALVSATDNEPPFTATPNRPGTWYM
                     EISYDPDVPRSLAAAAEAARNSGARLVVLSVHWGPNMISQPTATFRRFAGQAMEFADL
                     LHGHSAHVFQGVETRPGRLILYDTGDFLDDYAVDPELRNDWSFVFLVDVSLLGRPERL
                     RLFPVRLDYAQVNLAVGEERDEICDCMVARSAPLGVKYQRRKWGLELVLNGAATS"
     gene            2165..3148
                     /locus_tag="VGA78_14365"
     CDS             2165..3148
                     /locus_tag="VGA78_14365"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0002189 - ribose phosphate
                     diphosphokinase complex [Evidence IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX9895111.1"
                     /translation="MSTAPLLFALEGSRELGTRIATELGTELAPHEERDFEDGEHKIR
                     PLTSVRGRDVYALHPLAGSQTQSPNDRLIRLLVFLGALRDAGASRVTAIAPYLAYARK
                     DARTKPRDPVTLRYVAALFEAVRVDCVVVLDVHNLAAFQNAFRCRTEHLEARPLVVDW
                     VRSRLGADAVTVVSPDVGGVKRAERLRQSLERGLGRSVGMAFLEKYRSAGVVSGETLV
                     GNVAGGAALIVDDLISSGTTIARAARACSSAGANRVIAVASHGLFVGDANRVLGEAPL
                     ESVVVTDSVSPFRVQPGPLRDRLVVLETGPLLAEVIRRLHHEESLTALFET"
     gene            complement(3126..>3840)
                     /locus_tag="VGA78_14370"
     CDS             complement(3126..>3840)
                     /locus_tag="VGA78_14370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895112.1"
                     /translation="LVRMRRLPLDLMLDHLIAEGSVPEAALDRLVRRLAEFYRTARRV
                     RRPVESYRRRLMEEIEFDRHALTSGNHGLPPARVGRLAETVLALIDDSKDLLAERVRE
                     GHIVEGHGDLRPEHICLGIDPVIIDCLEFNRELREVDPADELAYLALECARLGAPAVG
                     RRILSGYQRESGDRFPSRLVRLYTGFRALLRARLAIEHTGDHRVRLGDQWRTRSLAYL
                     RLAEQSVLGPRPVRSRKGR"
BASE COUNT          635 a         1304 c         1296 g          605 t
ORIGIN      
        1 cccgacgccc cggatccggc tgcccccaag accacctggg tgcattgggt ggtctataac
       61 atcccggccg ccgtcgatgc gctgctggag aacgcgtcgc gacgcagaat gccggccggg
      121 gcgaaggaag ggctcaacga ctggaaacgc ccgggatacc agggcccctg cccgccgatt
      181 ggccggcacc gctatttcca taaggtctac gccctggaca ccacgctccc cgatctgggg
      241 ccggtcacca agagccagct cgaggccgcc atgcggggac acgtgctcga gcgggcggag
      301 ttgatcggga cctaccagcg atcggcctcg cccaacaggt cgtgacgccg tccgagagac
      361 ggccgcgagc atgaagctgg tttttctcgg gactcgtggt tacgtcgacg tgcgaacccg
      421 ccgccatcac aaccacagcg cgctcgaggt ccggtaccgc ggtcgacggg tcctcatcga
      481 ttgcggcgag gattggctgg gacgactcga gcggctccgc ccacacgcgg tagtattgac
      541 ccactcacat ccggatcacg ccttcgggct gcggaacggg gcgcccggtc cggtctacgc
      601 cacccgcgat acctggcgat cgctggaacg ctttccgatt gcggatcggc atcgaatcga
      661 cctgcgccgg ccccgcccga tcgagtccct gattttcgag gccttcgggg tcgaacactc
      721 ggtgcgggct ccggccgtgg gataccgcat caccgccggt tccgtcgtga tcttctacgc
      781 gcccgatctg gtatatatcc gcgagccggc gatggcgtta cgcaacgcga agctatacat
      841 cggcgacgga gccacgctga cccgccccct catccgacgc cggggcaagc acctgatcgg
      901 gcacacgccg gtacggaccc agttgagctg gtgccaacgg gccggtgtgc caaggatgat
      961 catcacccat tgcggaaccc agatcgtgga gcgcgacggt agccaactgc ggtccgagat
     1021 acgccgaatg ggccaggagc gcggggtgca ggcagagatc gcctttgacg gactggaggt
     1081 ccaactccgg agccggtgaa cccggccacg gtccttcacg aagtcgctgc cccattgagc
     1141 accagctcca acccccactt ccggcgctga tacttgactc caagcggggc ggatcgagcc
     1201 accatgcaat cgcagatttc gtcccgctcc tcgccaacgg ccaggttcac ctgggcatag
     1261 tcgagccgca ccgggaacag ccgtaaccgc tccggccggc ctaacaacga cacgtccacc
     1321 aggaagacga acgaccagtc gtttcggagc tccggatcca ctgcatagtc atcgaggaaa
     1381 tcgcccgtgt catagaggat caggcggccg gggcgggttt ccaccccctg gaagacgtgg
     1441 gcggaatggc catgcagcag gtcggcgaac tccatcgcct gaccggcgaa ccggcgaaag
     1501 gttgccgtcg gttggctgat catattgggc ccccaatgca ccgacaggac caccaaccgg
     1561 gccccgctgt ttctggccgc ctcggccgca gcggccagag atcgtggcac gtcggggtcg
     1621 taactgatct ccatatacca cgtgccgggg cggttcgggg tggcggtgaa gggcggttca
     1681 ttgtcggtgg ccgacaccag ggcgacccgg agcccggcaa cgtccaccag cgccggttgc
     1741 tgtgcttccg ccaggttccg gccggctccc gcatgggcga tgcccgcctg gtcgagcaac
     1801 cggagcgtat cgagcaatcc ctcgacctcg aagtcgagcg tgtggttgtt ggccaggctc
     1861 acgcagccga tgttccctgc tcgaagcacg tcgatggcgg ccggcgaggc ccggaagtgg
     1921 aacaccttcg gcgtttgcct ccattcctgg atatgcgagg tgatggcaca ttcgaggttg
     1981 gcaaacacgg tgtcggcgga gcggagcacc ggtcccaccg tgccccacag gctctcagga
     2041 ggccggcgcc ggagctcgat gtcgacccca cggcccagca tgacgtcgcc gaggaaaccc
     2101 aggatgggca tgttttcaac cgcgcatcat gatgacttca cgccccggga gtgaggttgg
     2161 ccgggtgtcc accgcgccgc tcctgtttgc gctcgagggt agtcgcgagc tcggaaccag
     2221 aatcgccacc gaattgggaa ccgagctggc gccccatgag gagcgggatt tcgaggacgg
     2281 cgagcataag atccgcccgc tgaccagcgt ccgcggccgg gatgtgtacg cgctgcaccc
     2341 gctcgccggc tcccagaccc aatcccccaa cgatcggctg atacgattgc tggtgttcct
     2401 gggcgccttg cgcgacgcgg gggcttcccg tgtcactgcc atcgcgccct acctggccta
     2461 cgcccggaag gacgcccgca ccaagccgcg cgacccggtg accctgcgct acgtggcagc
     2521 cctgttcgag gcggtccggg tggactgcgt ggtcgtgctg gacgtgcaca acctggccgc
     2581 cttccagaac gcgtttcggt gccggaccga gcatctggag gcccgtcccc tcgtcgtgga
     2641 ctgggttcgc agccggcttg gcgccgacgc ggtcacggtg gtgtctcccg atgtgggcgg
     2701 ggtgaagcgg gccgagcggc tgcgccagtc gctggaacgc gggctgggcc ggagcgtcgg
     2761 gatggcgttc ctggaaaaat accggagcgc cggcgtggtc tccggcgaga ctctggtggg
     2821 gaacgtcgcc ggtggcgcgg cgctgatcgt ggacgatctg atcagcagcg gcacgactat
     2881 cgcccgcgcg gcccgggcct gctcgagtgc cggagcgaac cgggtgatcg ccgtggccag
     2941 ccacgggctc ttcgtggggg acgccaaccg ggtgctgggt gaggccccgc tcgagtcggt
     3001 cgtcgtgacc gacagtgtgt ctccgttccg ggtccagcct ggtccattgc gggaccggct
     3061 ggtggtgctg gagaccggtc cgctgctggc cgaggtcatt cggcggctcc atcacgagga
     3121 atccctcacc gcccttttcg agacctgacc ggccgcgggc ccaacactga ctgttccgcc
     3181 aggcgaagat acgccaatga gcgagtccgc cactggtccc ccaggcggac ccgatgatcg
     3241 ccggtgtgct cgatggccag gcgagcccga agcagggcgc gaaacccggt gtagagccgc
     3301 accagccggg aagggaaccg gtccccgctc tcgcgctggt atcccgagag aatcctccgc
     3361 ccgaccgccg gggcgccgag gcgggcgcac tccagggcca ggtaggccag ctcatcggcc
     3421 ggatcgacct cgcgcaactc gcgattgaac tcgaggcagt cgatgatcac tggatcgatg
     3481 cccaggcaga tgtgctcggg gcgcagatca ccgtgcccct cgacgatgtg gccctcccgc
     3541 acccgctctg ccagcagatc ctttgaatcg tcgatgagcg cgaggacggt ttccgcgagg
     3601 cgccccaccc gggcgggcgg gaggccgtgg ttcccgctcg tcagggcgtg gcggtcgaac
     3661 tcgatttcct ccatcagtcg gcggcgatag ctctccaccg gccgccgcac ccgtcgcgcg
     3721 gtgcggtaga actccgcgag gcgccggacc aggcggtcca gggcggcctc gggcacgctg
     3781 ccctccgcga tgaggtgatc gagcatgaga tccagcggga gccgccgcat gcggaccagc
//
LOCUS       DASWKS010000508         7042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1767773, whole genome shotgun sequence.
ACCESSION   DASWKS010000508 DASWKS010000000
VERSION     DASWKS010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767773"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VGA78_14375"
     CDS             complement(<1..562)
                     /locus_tag="VGA78_14375"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9895113.1"
                     /translation="MLPDFRLERYFSRWEFSARYNLAGSDAETLTVAELLALGDESDR
                     RALLDLRLGYSETYGSPALRQAIAATYDRWEPEQVLCFVGAEEGIFCAMHALLQPGDH
                     AIVAVPNYQSTEEIPLSICEVTGVPLREATQWSMDPDEVKAALRPNTRLIAINFPNNP
                     TGKVIAPEILQALVELAAERDLYLLSD"
     gene            652..1092
                     /locus_tag="VGA78_14380"
     CDS             652..1092
                     /locus_tag="VGA78_14380"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9895114.1"
                     /translation="MRWIPRFVPALLVLSLPLSAAAQGNSEEAAVRRALEHYLQGHAT
                     GDGSHHRLAFYPQANLYFVQNGALSTLTSEEYAARSRGKPATDEAQRKRRIASIDITG
                     TAAMAKIELDYPTVRFVDYMSLLKVNGEWRIIAKIFHRESKAGG"
     gene            1532..1750
                     /locus_tag="VGA78_14385"
     CDS             1532..1750
                     /locus_tag="VGA78_14385"
                     /inference="COORDINATES: protein motif:HMM:NF021474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEX9895115.1"
                     /translation="MRTTLDLPEDLVNEAREMLGYKSKTDTIVFALRELIRRRKREQL
                     VGLFGKVKIDIDLDKSRRRPGYRTRTAG"
     gene            1747..2136
                     /locus_tag="VGA78_14390"
     CDS             1747..2136
                     /locus_tag="VGA78_14390"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEX9895116.1"
                     /translation="MICVDSSVWIAALRDETGSTAVHLAELVDADVVIVPAPVRIEVL
                     AGSPRQQLAALADGFSGVAGAIPGSSTWEKVEGWVGEAVAAGQRFAVVDLLIAATARE
                     HDASLWSLEVDFKRMQELGFVALYTAP"
     gene            2324..2554
                     /locus_tag="VGA78_14395"
     CDS             2324..2554
                     /locus_tag="VGA78_14395"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEX9895117.1"
                     /translation="MCRNIKKLRRPEAAPTETELADAALQFVRKISGFHAPSQANRKA
                     FDRAVRDITRASRTLFDSLHSPARNSAAGTAA"
     gene            2557..3021
                     /locus_tag="VGA78_14400"
     CDS             2557..3021
                     /locus_tag="VGA78_14400"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX9895118.1"
                     /translation="MTASSHHRVEASRRIPAPPARVYGVIADFEEGHPAILPPRHFRH
                     FTVESGGRGAGTVMRFEMHLGGVSRRVRSVVAEPEPGRVLTETDSEHDTITTFVVDPI
                     EQGEASMVTISTDLPSRRGLGGVIERRLITMLLRGVYAKELTRLTRYAGERL"
     gene            3047..3868
                     /locus_tag="VGA78_14405"
     CDS             3047..3868
                     /locus_tag="VGA78_14405"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9895119.1"
                     /translation="MKPISKTAFYCAGVRMVDAEQPRPICGDTYAKVFMTEEGLKLFE
                     PFRDQTYPNASNVARHRIIDDLLRSRLERDPGQRVVLIGAGFDSRAFRLTGGRWVELD
                     EPQVIAFKQERLPAAGAPNPLQRIGLDFATESLADALTPFRGERATVVVEGVLVYLTA
                     EQTMTLAETLRTTFPSHTLIVDLMTRTFFNRYAKAMQEKLRGLGATLLAGGDQPELPF
                     LTAGYRLVQRSSLPGRAAELGAIKLPRILQWTVLRSLVKGYQLHVFESTDNSGQT"
     gene            3868..4449
                     /locus_tag="VGA78_14410"
     CDS             3868..4449
                     /locus_tag="VGA78_14410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895120.1"
                     /translation="MLAYVFWHWKQESVPIDEYEAAQRAFHAALAAAPPPGFLGSRSF
                     ALAGYPWAAMGAAAYEDWYHVTDSAGLDPLNQAAVTASREAPHHAAARLAEGGTAGLY
                     RLKLPPEPPSTAFDRPRPPSTHASWFAKPAGLSYPALWSLLGRVVEDQKATLWIRHMT
                     LGPSPEFCLQSPGPLHLPPPIAPLGVTLRSVWP"
     gene            complement(4464..5156)
                     /locus_tag="VGA78_14415"
     CDS             complement(4464..5156)
                     /locus_tag="VGA78_14415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895121.1"
                     /translation="MAAMQRLLAGLGLRAALIVALLGVGVIGVLAVRSAGRRGAQELA
                     NQPDAPVLGADGKPIAPPLPAPGTLDSLQGLVVMPPESLPRFETREHGYEEESVVVYR
                     RQGDWYLVGLRDGGRAWVSEHGLGAFYPLNQLVVNRLNWLTESWDTRLRQVPDLTAPA
                     VEVDVPRARRQETPATVLEARPAGGTLWFRVEVLDTSPCEGGTPRVVATGWIPAWGSD
                     GKPTAWFYSRGC"
     gene            5244..6965
                     /gene="polX"
                     /locus_tag="VGA78_14420"
     CDS             5244..6965
                     /gene="polX"
                     /locus_tag="VGA78_14420"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HEX9895122.1"
                     /translation="MENSEIAGLLDEIADLLELTDENQFRIRAYRTAARTIWEKSEPV
                     AEIAKADPKQLLALPGIGKDMAAKIAELARTGRLEQLAELRRQTPKGVRELMHIPGLG
                     PKRAMQLYQVLNIRTLAGLKKAAKAGQLRKVPGFGQKTEERILREIETLQATPRRTLL
                     AEAAQLAEPYVAYLRQTPGVERCEVAGSYRRRAETVGDLDILVTCAPGTPIVERFISY
                     PAVREVLARGPTRASVRLRAGLQVDLRVLAPVSYGAGLYYFTGSKSHNIAVRRIAQDR
                     GLKINEYGVFRGRRRVAGTTEEEVFAAVGLPWIAPELRENRGEIEAAAAGQLPDLVTL
                     EQIRGDLQSHSTDSDGRDSLEVMAEAAAELGYEYYAVTDHSPALAMVQGLDKAGFRRQ
                     RKRIDKFNAGSPKLTVLAGAEVDILADGSLDMDDETLRMLDLVVVSLHSRLALSQEAQ
                     TDRICRGLSHPNVDIFGHPSARLIGRRQPVAVDWERIYRTAADHGVMLEINAQPDRLD
                     LTDLHARAAISQGIKLTLGSDAHRTKELEFMRWGVNQARRAWATPADIANTRPLAEFM
                     RLLHGSR"
BASE COUNT         1220 a         2331 c         2328 g         1163 t
ORIGIN      
        1 catccgacaa tagatagagg tcgcgctcgg cggcgagctc caccagtgcc tgcaagatct
       61 ccggcgcgat gactttcccg gtgggattgt tggggaaatt gatcgcgatg agacgggtgt
      121 tcggccggag cgcggctttc acttcatcgg gatccatcga ccactgggtg gcttcccgca
      181 gcggaacgcc cgtgacctcg cagatggaga gcgggatctc ctcggtcgac tggtaattgg
      241 gcacggccac gatggcatgg tcccccggct ggagcagcgc gtgcatggcg cagaagatcc
      301 cctcctcggc gccgacgaag cacaacacct gctcgggctc ccagcgatcg taggtcgccg
      361 caatggcctg gcggagcgcc ggacttccgt aggtttcgct gtagcccaac cgcaaatcga
      421 gcagcgccct ccggtcgctc tcgtcgccca aggccagcag ctcggcgacc gtcagcgttt
      481 ccgcgtcgga cccagccagg ttgtagcggg cgctgaattc ccagcgggag aagtatcgtt
      541 cgagtcgaaa gtcaggtaac atggcaggta ctcttcgggc tggagtgaac cggaactcaa
      601 tgtactctgc tagcgtaagg atgcggtccc tctacttgcc aggataacat catgcgatgg
      661 attccccgct tcgtccctgc cctgctcgtt ctgtccctcc ccctctcggc cgccgcccag
      721 gggaacagtg aagaggccgc cgtgcggcgg gcgctggaac actacctcca gggccacgct
      781 accggcgacg gcagtcatca ccggctggcg ttctaccccc aggccaacct gtacttcgtc
      841 cagaacggcg ccttgagcac cctgaccagc gaagagtacg ccgcgcggtc ccgcggcaag
      901 ccggcgacgg atgaggccca gcgcaagcgc cgcatcgcca gcatcgacat caccggcacc
      961 gcggccatgg ccaagatcga gctggactat cccaccgtgc gattcgtcga ttacatgtcg
     1021 ctgctgaaag tgaatggaga atggcggatc atcgccaaga ttttccatcg agagtccaaa
     1081 gccggaggct gagctcgggg actacggaat tcggcgacaa actcgccacc gtttgcggtt
     1141 tcaggatgac ggccctggag agtccgggcg ttagtctggg tctcgatggc cgacagcttc
     1201 ttgactcccc tcctcccaag accggatccc cgtgacgagg atacctgcgg acgcgaacgg
     1261 gtttgccgcg cgctcgccgc ggatcctgcc ctggccggcc gagtccagtg tgaggagcag
     1321 ggcactgtgg tgctttcggg tgcggcgggc gggccggctc ccgcgagctc gaaggagcga
     1381 gagcgttggg agctccatgt gcggctgcga ttggttgcgg agctggggga ggcagctgca
     1441 tcaaccgtct gccttcgatg ggctggctga ccgaatgcat atgacttcgg tggaattgac
     1501 atccccaggc atacgaagta ttgttagttg tatgcggacg acactggacc tccccgaaga
     1561 cctggtgaac gaagccaggg agatgctggg ctacaagtcg aagaccgaca ccattgtctt
     1621 tgcgttacgg gagttgatcc ggcggcgcaa gcgtgagcag ctggtcgggc tgttcggcaa
     1681 ggtaaagatc gacatcgacc tggataagtc ccgccgccgc cccggctatc gcactcggac
     1741 agccgggtga tctgcgtcga cagctcggtg tggatcgccg cgctgcgaga tgagaccggc
     1801 tcgaccgcgg tgcacctggc cgagctggtg gatgccgatg tcgtcatcgt gccggcaccg
     1861 gtgcggatcg aagtactcgc cgggtcaccc aggcagcaac ttgccgccct ggcggacggc
     1921 ttcagcggcg ttgccggggc aattccgggt tcatcgacgt gggagaaagt ggagggctgg
     1981 gtgggagagg cggtcgcggc cggccaacgg ttcgccgtgg tggacttgct gatcgcagct
     2041 actgctcgcg agcatgacgc gagcctctgg tccctggagg tggatttcaa acggatgcag
     2101 gagctgggct ttgtggcgct ttacaccgct ccctgatagc gcccatcggg gttctgttgt
     2161 acttcaccca tcaccatcag aatgtccaga tgccggcgga cgatgtccgc cttggcgctg
     2221 gcgaagcgtg ccgccactcg ctcgcggatc ctcgatcgac agggaacgac gtgcgatcag
     2281 ggcccgctcg acttacgttt ccggaccccc aacctcccag accatgtgcc gtaacatcaa
     2341 gaagctccgc cgccccgaag cggcccccac cgagaccgaa cttgccgacg cggcgttgca
     2401 gttcgtgcgg aagatcagcg gttttcacgc cccatcgcag gccaatcgga aggcgttcga
     2461 ccgagcggtg cgggacatca cccgtgcttc ccgcaccctg ttcgattcgc tgcactcgcc
     2521 ggcgcggaac tcagcggccg gcaccgcggc ttgagcgtga cggcttcgag ccaccaccgg
     2581 gtggaggcga gcaggcggat ccccgccccg cccgcgcggg tctacggagt catcgccgac
     2641 ttcgaggaag gccacccagc catcctgcca cctcgtcatt tccgccattt cacggtggag
     2701 tcgggtggca ggggcgccgg cacggtgatg cgattcgaga tgcacctcgg tggcgtcagc
     2761 cgcagggtac gatcggtggt cgccgagccg gagcccggcc gggtgctgac tgagaccgat
     2821 tcggagcacg acacgattac gactttcgtg gtggatccca tcgaacaggg cgaggcgagc
     2881 atggtgacga tttccaccga tctgcccagc cgccgaggcc tgggcggggt catcgagcgg
     2941 cggttgatca caatgctgct gcgcggggtc tacgccaagg agctgacccg gctgacgcgt
     3001 tacgccggtg aacgactctg agaggccggc gacggcgctt taggctatga agccgatttc
     3061 caagaccgcc ttctattgtg ccggggtccg gatggtggac gccgagcagc cccgccccat
     3121 ctgcggtgac acctacgcca aagtcttcat gaccgaggaa gggctcaagc tgttcgagcc
     3181 cttccgggat cagacctacc ccaacgcatc gaacgtagct cggcaccgaa tcatcgacga
     3241 tctgctgcgg tcacggctgg agcgcgatcc cggccaacga gtcgtcctga tcggtgccgg
     3301 gttcgacagc cgcgccttcc ggctcaccgg tggccgctgg gtggagctgg acgaaccgca
     3361 ggtaatcgcc ttcaagcagg agcggctgcc ggcggccggc gccccgaacc ccttgcaacg
     3421 gatcggcctc gatttcgcga ccgagtcgct ggccgacgca ctgactccct tccgcggtga
     3481 gcgggccacg gtggtggtgg aaggcgtgct ggtgtacttg accgccgagc agaccatgac
     3541 cctcgccgag acgctccgta ccaccttccc atcgcatacc ctgatcgtgg atctcatgac
     3601 ccggaccttc ttcaaccgtt atgccaaggc catgcaggag aagttgcggg ggttgggcgc
     3661 caccctgctg gcgggtggag accagccgga actgccgttt ctgacggcag ggtatcgtct
     3721 ggtgcaacgc agctcccttc ccggccgcgc ggccgagctg ggagcgatca agcttcccag
     3781 gatcctgcag tggaccgtgc tccggtcgct ggtgaaggga tatcaactgc acgtcttcga
     3841 gagcaccgac aatagtggtc aaacctgatg ctcgcctacg tcttctggca ttggaagcag
     3901 gagtcggtcc cgatcgatga atacgaagcg gctcagcggg cctttcacgc ggcgctcgcg
     3961 gccgctccgc ccccgggttt tctcgggtcc cgaagttttg cgctggcagg ttatccctgg
     4021 gccgcaatgg gagctgcggc gtatgaagac tggtatcacg tgaccgactc ggccgggctc
     4081 gatccgctga accaggccgc ggtcaccgcg agccgtgagg cgccccacca cgccgcggcg
     4141 cgattagccg agggcggcac tgccgggttg taccggctca agctgccccc cgaaccgcct
     4201 tcgaccgcct tcgaccgccc tcgaccacct tcgacccacg cgagctggtt cgccaaacct
     4261 gccggcctgt cgtatccagc gttgtggtcc ctgctgggca gggtggtgga agaccagaaa
     4321 gccaccctgt ggatccgcca tatgacgctg ggaccttctc ccgagttctg cctgcagtcc
     4381 cccggcccgc tgcatctccc tcccccgatc gctcccctgg gcgtcacgct ccgaagcgtc
     4441 tggccctgag aggctgcggc ggctcagcag ccccgcgagt agaaccaggc ggttggcttg
     4501 ccgtcactac cccacgccgg aatccagccg gtcgcgacaa cgcgaggagt cccgccctca
     4561 caggggctgg tgtccaggac ttccacccgg aaccagaggg taccgccggc cggacgcgcc
     4621 tcgagcaccg tggcgggagt ctcctgccgc cttgcacggg gcacatcgac ctcgacggcg
     4681 ggagcggtga gatcgggcac ctggcgcagg cgggtatccc acgattccgt gagccagttg
     4741 agacggttca ccaccagctg attgagggga taaaacgcgc cgagcccatg ctcgctgacc
     4801 caggcgcggc ccccgtcgcg caagcccacc agataccaat cgccctgccg gcgatagacc
     4861 acgaccgact cctcttcgta gccgtgctcc cgggtctcga accggggcag cgattcgggc
     4921 ggcatgacca ccagaccttg cagcgagtcg agggtccccg gagccgggag gggtggcgca
     4981 atcggttttc catcggcgcc cagcaccgga gcgtcgggtt ggttcgccag ctcctgagcc
     5041 ccgcgccgtc cggcggatcg caccgccagg acgcctatga ccccgacgcc aagcagggcg
     5101 acgatgagag ctgcccgcaa tcccagcccc gccaggagtc gttgcatggc ggccatgtta
     5161 tcctccgctg acatggggcg ccaccgcgcc agggatacca gttccgaatg gtccggccct
     5221 tgttggccgg cagcgagccg cgcatggaaa actccgagat cgccggactg ctggacgaga
     5281 tcgccgacct gctcgagctg accgacgaga accagttccg cattcgcgcc taccgtaccg
     5341 cggcccggac tatctgggaa aagagcgagc cggtcgccga gatcgccaag gcggatccca
     5401 agcagttgct ggcgctgcct ggcatcggca aggacatggc ggccaagatc gcggagctgg
     5461 cccgcaccgg gcggctggag cagctggccg agctgcggcg ccagaccccg aagggggtgc
     5521 gcgagctcat gcatatcccc gggctggggc cgaagcgggc catgcagctc tatcaggtgc
     5581 tcaacatcag aaccctcgcc gggctgaaga aggccgccaa agccggccag cttcggaagg
     5641 tgccgggctt cggtcagaag accgaggaac ggattctccg ggagatcgag acccttcagg
     5701 ccacgccgcg ccggactctg ctcgccgaag cggcccaact ggcggaaccc tacgtggcct
     5761 acctgcggca gacccccggc gtggaacgtt gcgaggtggc gggcagctat cggcgacggg
     5821 cggaaacggt gggagacctg gatatcctgg tgacctgcgc cccgggtacc ccgatcgtgg
     5881 aacggttcat ttcgtacccg gcggtgcggg aagtgctggc ccgtggcccg acccgggcca
     5941 gcgttcggct gcgcgccggc ctgcaggtgg atctgcgggt cctggctccg gtgagctacg
     6001 gcgccggcct ctactacttc accggctcca aatcgcataa catcgcggtg cgccgtatcg
     6061 cccaggaccg cggtctcaag atcaacgaat acggcgtctt ccggggccgg cgtcgggtcg
     6121 caggcaccac cgaggaagaa gtcttcgccg cggtcggttt gccctggatc gcaccggagc
     6181 tgcgggagaa ccggggcgag atcgaggccg cggccgccgg gcaactgccg gacttggtga
     6241 ctctggaaca gatccggggg gatcttcaga gccattccac cgacagcgac gggcgtgact
     6301 cgctcgaggt aatggccgaa gccgcggccg agctggggta cgagtactac gcggtcactg
     6361 accacagccc ggcgctggcc atggtgcagg gactggacaa ggccgggttc cgccgccagc
     6421 gcaaacggat cgacaagttc aacgccggct caccgaagct gaccgtcctg gcgggcgccg
     6481 aggtcgacat cctggccgat gggtcgctcg atatggacga tgagacgctc cggatgctcg
     6541 atctggtggt agtctcgctc cactcgcggc tggcgttatc ccaggaggcc cagaccgacc
     6601 ggatctgccg gggcctctcc caccccaacg tggacatctt cgggcacccc agtgcccggc
     6661 tgatcggccg gcgccagcca gtcgcggtcg actgggagcg gatctatcgg accgcggcgg
     6721 accacggcgt gatgctggag atcaacgccc agccggaccg gctggacctg accgacctcc
     6781 atgcccgcgc tgccatcagc cagggaatca agctgacgct gggcagcgat gcccaccgca
     6841 ccaaggaact ggagttcatg cggtggggag tgaaccaggc ccggcgcgcc tgggccaccc
     6901 cggccgacat cgcgaacacc cggccgctcg cggagttcat gcggttactc cacggaagcc
     6961 gctaggaaac attctctccg ccgatggtgc agaatgccgc cgatcacgct ggtcttgctt
     7021 ggcgtggttt gcaacgccag cc
//
LOCUS       DASWKS010000509         3566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2500271, whole genome shotgun sequence.
ACCESSION   DASWKS010000509 DASWKS010000000
VERSION     DASWKS010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3566
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2500271"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..2268)
                     /locus_tag="VGA78_14425"
     CDS             complement(124..2268)
                     /locus_tag="VGA78_14425"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9895123.1"
                     /translation="MTRMIAAVALALTVLPSPVPAQRTQTGFTVEQIKSYPFPNELTA
                     SLTGSKLAWAFNERGQRNIYVAEGPDFTARRLTSYTQDDGQELTSVTISADGRWVVYV
                     RGGDHGSNWDDAVPVNPTFQPTPPKVQIWSVPFGGGEPKAIGEGDGPVISPRSDVVAF
                     TKGGQIWTAPLDGSAPGKALFTARGSNGEVVWSPDGTRLAFVSNRSDHALVGVFTNGD
                     TPITWIAPSFTRDRSPRWSPDGGRVVFVRTPGGGGAPDSLLTRRHSAWSIWAADAASG
                     KATQLWKAPATLRGSIPNTHGGFNLHWAAGRIVFLSYMDGWPHLYSLAETGGDPLLLT
                     PGNFMAEYIRLSPDRKWLVFAGNTGRDPLDLDRRHVVRVPVDRAAPEVMTPGAGLEWT
                     PVVTGDGSNLAFIGATTQRPPLPAVMPFRGGAARTLAADRIPADFPTTQLVTPRQVTF
                     KAPDGTVVHGQLFEAPGGSSKKPAVVYVHGGPPRQMLLGWHYSDYYTNAYASNQYLAS
                     KGFVVLSVNYRLGIGYGYEFHQPVAGGTAGASEYQDVKAAGEWLAQQPQVNAARIGVY
                     GGSYGGYLVAMALGRDSKLFAAGVDIHGVHDRTGGRGRSLLTPDRYELAPDAERAMEV
                     AWESSPVSSVATWTSPVLIIHGDDDRNVRFSQSTDLVRRLEAKGVPVETLVIVDDTHH
                     FMRHANLVAVNAATADFFQRKLAAGTDVSTKP"
     gene            complement(2306..>3566)
                     /locus_tag="VGA78_14430"
     CDS             complement(2306..>3566)
                     /locus_tag="VGA78_14430"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895124.1"
                     /translation="IGRDHGADYALSGSVRWERRPDGSSRIRVTPRLIRVQGEQELLG
                     QTIDAALVDVFDVQRSIAERVTAALGLALAPPARARLAAVPTQRIDAWDHFVRGNFYL
                     AQRTPDAVTRAIQDYQEAARLDSGFTRALARQAYGYTLFLDWGWRFEGRSDQELRTLA
                     RGLTDQALGGDSTSAEAWLSLAYLRVVEDPFRMKGATPAFERSLALDSTNAEAWYQFG
                     QALMALGRDSAAAAAYHRALALEPERPMTLVPLSAIARNQGRLAEARKFADSAVGLVG
                     MASPYARVVRGNLVLAAGDPAGAIRDAEVALATDSSYPVPARSLLVRAYAARGDTARA
                     VSELERALGSINTAAPSSTDARFLAVALIALGRRNEAVQLIERVRPRGGYLWFYLTAH
                     DFDPLRTDPRFHTVFSQADPRRPDDPR"
BASE COUNT          584 a         1182 c         1247 g          553 t
ORIGIN      
        1 gagcaggatg caggaagcag gaagcaggga gcaggagtga tgggtaaggg agaagcctgg
       61 accggtctct gcctcccgcg ccgtgctccc tgctccctgc tccctgctcc ctgctttctg
      121 aggttacggt ttcgtactga cgtcggtgcc ggccgccagc ttccgttgaa agaaatcggc
      181 ggtggcggcg ttgacggcga ccaggttggc gtggcgcatg aagtggtggg tgtcatccac
      241 gatcaccagc gtctcgaccg ggacgccctt cgcttccagg cgccggacca ggtcggtgct
      301 ctggctgaat cgcacgttgc ggtcgtcatc gccgtggatg atcagcaccg gtgaggtcca
      361 ggtcgccacc gacgagaccg gagacgattc ccaggccacc tccatcgccc gttcggcatc
      421 cggcgcgagc tcgtaccggt cgggagtgag cagactccgg ccccgcccgc cggtccggtc
      481 gtgcacgccg tggatgtcga ccccggcggc aaacagcttc gaatcccgtc ccagggccat
      541 cgccaccaga tagccgccgt aggatccgcc atacactccg atgcgagcgg cattcacctg
      601 gggctgctgc gccagccact cgccggcggc cttgacgtcc tggtactccg acgcgcccgc
      661 ggttccgccc gcgacgggct gatggaactc gtagccatac ccgatcccca gccggtaatt
      721 caccgagagc accacgaagc ccttgctggc gaggtattgg ttgctggcgt aggcgttggt
      781 gtagtagtcg gagtaatgcc agcccaggag catctgccgg gggggtccgc cgtgcacata
      841 gacgacggcc ggttttttcg aagaaccacc gggggcttca aagagttggc cgtgcaccac
      901 ggtgccatcc ggcgccttga aggtgacctg ccgtggggtc accagctgag tcgtggggaa
      961 gtcggctgga atgcgatcgg cggccagcgt ccgggccgcg cccccgcgga agggcatcac
     1021 cgccggcaac gggggacgct gcgtggtggc gccgatgaag gcgagattcg atccgtcccc
     1081 cgtgaccacg ggagtccatt ccaacccggc gcccggcgtc atgacctcgg gtgcggcccg
     1141 gtcgaccggc acccggacca cgtgacgccg gtcgagatcg agcggatccc gcccggtgtt
     1201 tcccgcgaag accagccatt tccggtcggg actcaagcgg atgtactccg ccatgaaatt
     1261 gccgggcgtc agcaacagcg ggtcgccacc ggtttccgcc aaggagtaga gatggggcca
     1321 cccatccata tacgacagga acacgatgcg accggcggcc caatggagat tgaagccgcc
     1381 atgggtgttc gggatggagc cgcgtagcgt ggcgggagcc ttccagagct gagtcgcctt
     1441 gccgctggcg gcatcggcgg cccagatcga ccaagccgaa tgccgccgag tcagcaggga
     1501 gtccggagcg ccaccgccgc ccggggtgcg cacgaacacc actcggccgc catcgggtga
     1561 ccagcggggc gagcggtcac gggtgaacga cggcgcgatc caggtgatgg gcgtgtcgcc
     1621 gttggtgaag accccgacca acgcgtgatc gcttcgattg gaaacgaagg ccagccgggt
     1681 accatcaggc gaccagacca cctcgccgtt ggaaccccgg gcggtaaaga gcgctttgcc
     1741 gggagcggag ccgtcgagcg gcgcggtcca gatctggccc cctttggtga aggcgacgac
     1801 atcgcttcgg ggcgagatga ccggcccatc cccctccccg atggccttgg gctcgccccc
     1861 gccgaacggg acactccaga tctgcacctt gggcggcgtg ggctggaagg tggggttcac
     1921 cggcacggcg tcgtcccagt tggagccgtg atcgcctccc cgtacataga ccacccagcg
     1981 gccgtcggcc gagatggtca cggacgtgag ttcctgaccg tcgtcctggg tgtagctggt
     2041 gagtcgccgg gcggtgaagt cgggcccttc ggccacatag atgttgcgct ggccccgctc
     2101 attgaaggcc caggcgagct tcgacccggt gagcgaagcg gtcagctcat tggggaaggg
     2161 gtaggacttg atctgttcga ccgtgaatcc ggtctgggtc cgctgggccg gcaccgggct
     2221 cggaagcacc gtcagggcga gggcgacggc cgcgatcatt cgtgtcatat gagacctcac
     2281 gtcgggggag agcaactgca acatactatc tcggatcgtc cgggcgtcga gggtccgcct
     2341 ggctgaacac cgtatgaaat cgagggtcgg tccgcagtgg atcgaagtcg tgggcggtca
     2401 gatagaacca caggtagccg ccccgaggac ggacccgttc gatgagctgc acggcttcat
     2461 tcctccggcc cagcgcgatc agcgcgactg ccaggaacct ggcgtcggtg gatgagggcg
     2521 ccgcggtatt gatggacccg agagcgcgct ccagctcgct caccgcgcga gccgtgtcgc
     2581 cccgagcggc gtaggccctg accagcagcg aacgggccgg caccgggtag ctgctgtcgg
     2641 tcgccagcgc cacctccgcg tcccggatcg ctcccgcggg atcgccggct gccaagacca
     2701 ggttgccccg aaccacgcgg gcgtagggac tcgccatgcc gaccaggccc acggcgctgt
     2761 cggcgaactt gcgggcctcg gccagccggc cctggttacg ggcgatggcc gagagcggca
     2821 ccagtgtcat ggggcgctcc ggctcgagcg cgagggcgcg gtggtatgcg gccgcggcgg
     2881 cgctgtcccg tcccagtgcc atcaacgcct ggccgaactg gtaccaggct tcggcgttgg
     2941 tcgagtcgag cgccagcgaa cgctcgaagg caggtgtggc ccccttcatt cgaaacgggt
     3001 cctccaccac gcgcaggtag gccagggaca gccaggcctc tgccgaggtc gaatcgcccc
     3061 cgagggcctg gtcggtcagg cccctcgcca gggtccgcaa ctcctgatcg gatcgaccct
     3121 cgaaccgcca gccccagtcc agaaacagag tgtatccgta ggcctggcgg gccaacgcgc
     3181 gggtgaatcc ggaatcgagc cgggccgctt cctgatagtc ctgaatggct cgcgtcaccg
     3241 cgtcgggcgt gcgctgggcg agatagaagt tgccgcggac gaaatgatcc caggcgtcga
     3301 tccgctgggt cgggacggcg gccaggcggg ctcgggccgg tggcgcgagg gcgagcccga
     3361 gcgctgccgt cactcgttcg gcgatgctgc gctggacgtc gaacacgtcc accagggccg
     3421 cgtcgatggt ctggcccagc agctcctgtt caccctggac ccggatcagc cggggcgtga
     3481 cccggatgcg actgctgcca tcgggacgac gctcccagcg cacgctgccg ctgagcgcgt
     3541 agtccgcgcc atggtcccga ccgatc
//
LOCUS       DASWKS010000510        15069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1377551, whole genome shotgun sequence.
ACCESSION   DASWKS010000510 DASWKS010000000
VERSION     DASWKS010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 15069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377551"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="VGA78_14435"
     CDS             <1..1164
                     /locus_tag="VGA78_14435"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9895125.1"
                     /translation="DGVLLDVRLPGMTGLETLRAIRSNGYTGPVVLVSGQVNSETAAD
                     AIESGAEDFITKPMAPSALRALAARMVANEIGADAVSPSSLAAAGREMRLVGKSPEML
                     EVAKAIAQVARADSPVLILGEPGTGKELVAYLIHQRSRRPGPLVTLNCSWIPRANLER
                     ELFNAFELASMGTLFIDDIGSMALPLQEKLLEAIVTNRLERTDGADRIHHSARVLVAN
                     SGNLAQAATSGEFRTDLYYRLAVVTIHLSPLRERAGDIRILTDYFAHRLAARLGRRLT
                     GLSEGVYQRLSEYSWPGNVRELRNVIERSLLQCTGHVLATADLQNVPMPASERIEPLA
                     LADYAKAGKMLEDVAWDYINQVLAETCGNQSEAARRLGIHRNTLRRMMQSHGQ"
     gene            complement(1280..1909)
                     /locus_tag="VGA78_14440"
     CDS             complement(1280..1909)
                     /locus_tag="VGA78_14440"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX9895126.1"
                     /translation="MLPHAGQPILTAGPPPEASRAAMIMLHGRNAGPRNILELAGPLH
                     HPDFCYLAPAAASNTWYPYSFLAEIQENEPGISSGLYVVDQLVQRLMQAGIAKHRVWL
                     LGFSQGACLASTYAVRHADRFGGVIVLSGGLIGPPSTSWDYPGDFAETPVFLGCSETD
                     PHIPKARVEESAAVFTRMGASVTQRLYPRMGHLVNDDEVESVRGLMAGT"
     gene            complement(2050..2994)
                     /locus_tag="VGA78_14445"
     CDS             complement(2050..2994)
                     /locus_tag="VGA78_14445"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEX9895127.1"
                     /translation="MEKLIRSLHHVTATVSDAQEDLDFYGDLLGLRLVKRTVNFDNHH
                     VFHFYYGDAVGNPGTIMTTFPYKGMGVPVGSRGAGQIGLTAFSVPVDSLDFWRTRLRT
                     HAIAIAGEGSRFGEEFLAFHDPSGLAIELVANPLDQRDPWTGETIGAAVAIRGVHRVS
                     MVLRSPAQSLQFMTEVLGYEVVGEADSRTRVAVNGNLPGHIIELLHVPDAPAARNGLG
                     TVHHVAMAIADAGEQLRVRQELVRLGINVTEVRDRQYFRSIYFREPGGVLFEIATVPP
                     GFLVDEDPAHLGSGLKLPPWEEPHRPSIEAALPSIKVR"
     gene            complement(3403..4797)
                     /locus_tag="VGA78_14450"
     CDS             complement(3403..4797)
                     /locus_tag="VGA78_14450"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895128.1"
                     /translation="MRLISVLVSVFLAAVEMVIGQQPVVLSGVTVIDGTGAPPLPDAV
                     VVISQGRITAVGRRGQISVPGNAAVQELPGRYLLPGFIDMHAHVAFGPVTVGKNPGEP
                     PLSFKYDEAASLQMLRALLAYGVTTIRNPAGPTAEAVALRDRVGRGEVPGPRTFAAGE
                     VIDFMTTPGLGVGAATDSAVRVAVRAQAKAGVDYIKLYAGLAPALLAAGVDEAHRHGL
                     KAIAHPLFTSWTEAARSGIDGIVHIVPGNPRLLPPGRRPAYLKSITGTQFMYTWFEYV
                     DFAAPEIDTMITALTTRNIPIDPTLVTFEAMFRGNDTLITRSPDLITTPGSLLRNWQQ
                     DFTLSMGWTQDEFRAAQSAWPTVLAFTKLLYDRGVFLLVGTDTPNPWAAPGTSFHREM
                     ELLVNAGIPPLEVLRLATRNGAEALGISNEVGTIAVGKRADLVLLETDPVADIRSTRR
                     IVWVMQGGRILPRP"
     gene            5016..5546
                     /locus_tag="VGA78_14455"
     CDS             5016..5546
                     /locus_tag="VGA78_14455"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9895129.1"
                     /translation="MSGPAARTERPEDWFARLLAEHGPAVARLAAVYEWDRDEREDLV
                     QEIALAIWRALPAFRGDSSERTFVFRIAHNRGLSHRWQRRESAVELAEAEQVPDHRAN
                     VEEEVARRERYERLAAAIRRLPESYRVAVVLTLEGLSLREVGEVLGAGENAVAARLTR
                     ARRQLRILLEEEHPSG"
     gene            5543..6121
                     /locus_tag="VGA78_14460"
     CDS             5543..6121
                     /locus_tag="VGA78_14460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895130.1"
                     /translation="MNPVADPEWAGLAARWQAEVLPPRLSVERLLRREGRRRLLMGLL
                     VAVEALLSLTAVAATVSARRRLPEPNGTLLLIAALVYVVLVWGFALWNRRGTWRPLAR
                     TTEAFVAVSKLRCRRGLRSVRFVVTVVTTQLLLTAGWLVLRAGGETPVWTARETLALA
                     PSLSVGVLFLLWAVWYRRVMLRRLAWLEQMPS"
     gene            6168..6746
                     /locus_tag="VGA78_14465"
     CDS             6168..6746
                     /locus_tag="VGA78_14465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895131.1"
                     /translation="MWLLSLLPAGWVVAVPALPAQAPDTQIAAAVLPLPERLRPAATV
                     LGYRDSKTLVELRKGTNGVICLADDPDVPAFHVACYHQSMEPFMARGRALRASGITGE
                     QVDSVRFREIKQGTLKIPAGPAALWSLSGPPGSWDSTANEVKGGRPLYVIYIPFATEE
                     STGLPATPAPGQPWLMFPGTPKAHIMFVPRMN"
     gene            complement(6837..7553)
                     /locus_tag="VGA78_14470"
     CDS             complement(6837..7553)
                     /locus_tag="VGA78_14470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895132.1"
                     /translation="MHRTSRLGRLAALALAALTACSDPVDVTDPIVVEFDLTLDQLSA
                     WAIGSSDYLASQEAAVEFQAEKRALPDNLGGGPAFYHAGTNISDDLWMYFARQVQAFQ
                     PGATYRLGFQVHFATNQHSGCTVGTGPSVWIKAGASTEQPARLLSGDGSWRMNVDKGE
                     QSQVGSAAVLLGDIRNGLPGCPSPPQYQANVAGDPTETIAVTANDSGAIWLFFGTESG
                     FESRHEIYFTRFTVQATLQD"
     gene            7630..8928
                     /locus_tag="VGA78_14475"
     CDS             7630..8928
                     /locus_tag="VGA78_14475"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9895133.1"
                     /translation="MRTLPLLLATLWLPRLAVAQELSAAERRITAAVDAGVAQSGRLL
                     ERAVNLNSGTFNLAGVRAVGRLFQTEFGRLGFRTRWLDGRAWGRAGHLVAEWRGSGTG
                     PKLLFIGHLDTVFEPDSPFRKYQRLRDSTAQGPGVIDMKGGNVIMLLALGALKQAGLL
                     AGFQVSVVLTGDEEETGTPLSKGRAALLEAARWADIAIGFEDGDGDPRHAVIGRRGWT
                     GWTLTTKGRPGHSSLIFSQEVGSGAIFEAARILAAFRDSLAGEANLTFNPGLIAGGSD
                     VTLEKTGERGRVFGKSNVIADQAVVTGDLRSLTIEQRDRAKQRMRAIVGRHYPLSDAA
                     IEFEDTYPPMTPTEGNRRLLQLLDQVSRDLGAGPVSPVNPANAGAADVSFTAGLVDMA
                     IDGVGLKGSGGHSVHETADLRTLPIQAKRVAILIYRLTKL"
     gene            9137..10105
                     /locus_tag="VGA78_14480"
     CDS             9137..10105
                     /locus_tag="VGA78_14480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895134.1"
                     /translation="MPAAAVDGALERLIRNAVDEVLDTAGHGANALGAAVRQWAIRLA
                     DGEEPAALFIADWRYPMLQLPWWIEPSVRGARDLEFQRALARSTVAGYYFIRLVDNAV
                     DAHGSNRALLAAGGILFSTFQQPYQTYFPPAHDFWIHFRSAWQAGAEAVYREARLGDQ
                     PLDDEAFQTIAAPKVAAATIPVGAVLLRAGRGDRLPAWLRVCELLACHEQMLDDLFDW
                     LRDLKARRPTRLLTEALARGRTRDGAVAWFLSEGVSWALQRMQQWRAAMRDAVLRLEC
                     PEFLGFLDRRAELIEQWEASWRPGLATLSKLDEAFPAGGPAPEVAR"
     gene            10102..10317
                     /locus_tag="VGA78_14485"
     CDS             10102..10317
                     /locus_tag="VGA78_14485"
                     /inference="COORDINATES: protein motif:HMM:NF038399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Os1348 family NHLP clan protein"
                     /protein_id="HEX9895135.1"
                     /translation="MTFEQLVSRMVSDRKFREGVARDPEGTLKSAGVTPTPEMVSALR
                     RVDYGALKQVGKSFGQADSCEGGLLTS"
     gene            10329..11165
                     /locus_tag="VGA78_14490"
     CDS             10329..11165
                     /locus_tag="VGA78_14490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895136.1"
                     /translation="MLVAGLSETPRGSAAGVLGLLAGRLPEAGEVAGLLGDVLWVVTY
                     VLIIRAGFRSREYGIPLTAIALNFTWELIYGVLYPPGAVAARVLHGAWLALDLVIVIQ
                     LVRYGKAVQTHSLIRRFFYPIVAVTLVLAFIGHLLFRRQFVTAQIMPDSDGLISAYAI
                     NLVMSVLFVFFLPGRHTRDALSVGAAWTKCLGTGLVSLGNYLAHLGNPPPLYNVQYHP
                     VGEVAWTSLPPRHLLPVNPDFLWYLAATVFLFDLLYIRLLYRLPAAPSRPATDPTPVR
                     SG"
     gene            complement(11092..12486)
                     /locus_tag="VGA78_14495"
     CDS             complement(11092..12486)
                     /locus_tag="VGA78_14495"
                     /inference="COORDINATES: protein motif:HMM:NF024964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4135 domain-containing protein"
                     /protein_id="HEX9895137.1"
                     /translation="MARPIAQAPFRSWSTARVRAAVEQIRRAAPEPDRITASAWLLLR
                     DDLRSSVAARIREYLPPTADPSTEPAWAIEHLVSQWTDSVSQFLNHLAEDTMLLQDAF
                     GPRFEGGPVTGIRTGLSDPHAGGHTVIAWKTAQGEFYFKPRDAGVEVRFMALLKQLGG
                     LDPELGWRMPRLVSSGGHAWMTGVIPQSGPRRLTSRLGRRLGMLLGLLDGLQAADCHA
                     ENLLVRGERPFLVDLETLCHPTLPWEPPRSRDPGDPASLLRVGLLPAPRRSDDGRWRD
                     QGGVTSAGIALERLAPSIEQGFVTMYRRFARNGEWRDVIDQFHEAVSGHRTRVLLRAT
                     ERYRAALRTSGALTLAPRPEREWALQQALGRRADGGASPVPESIRSAETRALAALEIP
                     RFTADPTGTAVHGPAGERFAGLCRASGIERSRVRLGCHSESDLERRRAVIRTALGLGQ
                     LLAAMEQPAADREA"
     gene            12530..14917
                     /locus_tag="VGA78_14500"
     CDS             12530..14917
                     /locus_tag="VGA78_14500"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9895138.1"
                     /translation="MTNQLLERLQAALGEGFLVERELGRGGMSTVYLVLDRRHQRRIA
                     VKVVNPDLGLDLAADRFQREIEVAASLNHPHIVPLLDSGTALGLRYYTMPYIEGESLR
                     QRLDREHQLPLGESLRLARDVAAALAAAHARGLVHRDIKPENIMLSGGEAVVTDFGIA
                     RVMQSAAGVDSLTKTGLVIGTPMYMSPEQAAGNPVIDGRSDVYSLACVLYEMLVGHPP
                     FHGTTPQEILGRHALDPVPPVRSGRPGVPEAVDLVLQEALSKSPADRLGSASDFAAIL
                     DDLRTTGTTARVRISAAGTRNWRRRPLVRRLAAVVGVLLLLILAVLAGRQFGGGPAAS
                     PGSPARLAVLPLVSVGLEDSALFAEGLTDEMTIRLARLSDLAVIARNNTLGYRNSGKT
                     VQQIGRELGVEYVLEGQVRWSETGGTRRVRVTPSLVRVLDGAQVWSDALEGVVSDVFA
                     LQARMAQRVAEALPIRLGSSDRRTLGTAATGSVDAYREYVLARFYWQQRTGKGLERAV
                     DHFNRALKLDPLFARAYAGLADSYILFSQYGVTSLPRDIAWTRAREAANRALALDSTQ
                     VEALASLGEIIFYSEWDWEEAESYFRRAIAADPNYATARQWYSELLTVTGRFDDAIVE
                     ADRGALLDPVSGIVSHARAIALLGARRYDEAIAQYRRVLEIDPGLGYANFGLVWAHIA
                     ERDYASAVRQMARLGDTTALARAWIRGAVDPAFRPEARRTLARARDVVEQWPAEIQAS
                     VHASVGNVDQAVAVLERTFQEKAPNPPGVKPLPLYDPIRQDPRFRELLRKMNLPI"
BASE COUNT         2467 a         4871 c         5197 g         2534 t
ORIGIN      
        1 gacggggtcc tgctggatgt ccgccttccc gggatgacag ggctggaaac ccttcgcgcc
       61 attcgatcca atgggtatac cgggccagtg gttctcgtga gcggtcaggt caactcggag
      121 acggcggccg acgccatcga atccggagcc gaagacttca tcaccaagcc gatggctccg
      181 tccgccctga gggcgctggc agcgcggatg gtcgccaacg agatcggagc cgacgcggtg
      241 tcgcccagtt ctctcgcggc cgccgggcgg gaaatgcgcc tggtcggcaa gagccccgag
      301 atgctggaag tggccaaggc catcgcccag gtagccaggg ccgattcgcc ggtgttgatc
      361 ctgggtgagc cggggaccgg caaggagctg gtggcctacc tgatccatca gcgaagccgc
      421 cgtccgggcc cgctggtcac gctgaactgc tcctggattc cgcgagccaa cctggagcgg
      481 gagctgttca atgccttcga gctggcttcg atgggcaccc tcttcatcga cgacatcggg
      541 tcgatggcct taccgctgca ggagaagttg ctggaggcga tcgttaccaa ccggctggag
      601 cggaccgacg gtgccgaccg catacaccat agcgcccggg tcctcgtggc caacagcggg
      661 aacctggcgc aggcggcaac ctcgggcgaa ttccgaaccg atctctacta ccgtctggca
      721 gtggtgacca ttcatctctc gccgctccgg gagcgggccg gagatatccg gatcctgacc
      781 gactacttcg cgcaccggct ggccgctcgg ctgggccggc ggctcacggg tctgtctgaa
      841 ggtgtgtatc agcggttgag cgagtactcc tggcccggca acgtgcgcga gctccggaac
      901 gtgatcgagc gctctctgct ccagtgcacc ggccacgttc tggccaccgc cgacctgcag
      961 aacgttccga tgccggcgag cgagcggatc gagcccctgg ctctggcaga ctatgccaag
     1021 gccggcaaga tgctggaaga tgtcgcgtgg gattacatca accaggtcct ggccgagacc
     1081 tgcggcaacc agagcgaggc ggctcggcgc ctgggcattc atcgcaacac cctgcggcgg
     1141 atgatgcaga gtcacgggca atagacggac tgacggactg acggacgggc ggactggcgg
     1201 gcaggcgggc gaggcaaaag tgcagggtga ggaggggcgg cccctccgaa ctctgcactc
     1261 tgcgttctgc accctgcatt catgttcccg ccatcaaacc tcgcaccgat tccacttcat
     1321 cgtcattgac caggtgaccc atccgcggat agaggcgttg ggtcacgctg gctcccatcc
     1381 gggtgaatac cgcagcgctt tcctccaccc gtgccttggg aatgtgggga tcggtctcgc
     1441 tgcatcccag gaataccggg gtctcggcga aatccccggg gtaatcccag ctggtgctgg
     1501 gcggaccgat cagtccaccg ctgagcacga tgacgccacc gaagcggtcg gcgtgtcgca
     1561 ctgcgtaggt cgatgccagg caggctccct gcgagaatcc caggagccac acccggtgct
     1621 tggctatgcc agcctgcatc agccgctgca ccagctgatc caccacgtac aagcccgagg
     1681 aaatcccggg ctcgttctcc tggatctccg ccaggaagct gtagggatac caggtgttgg
     1741 atgccgccgc gggagcgagg tagcagaagt caggatgatg gagggggccg gccagctcga
     1801 ggatgttccg cggaccggca ttgcggccgt ggagcatgat cattgcggcg cggctggcct
     1861 ccggtggagg acccgcggtg agaatgggct ggccggcgtg agggagcatt atgccaacgg
     1921 ggcagggggg agtgaatgca gaatgcccag tgcccaatgc ccatagcaga gggatggtag
     1981 tgggcaagac cttctgattt gggcattcgc cattgggcac tctccattta ctcccacttg
     2041 agccctctcc tatctcacct tgatggatgg tagcgctgcc tcgatggacg gacggtgcgg
     2101 ttcctcccac gggggcaatt tgagcccgct tccgagatgg gccggatcct catccaccag
     2161 aaaaccgggc ggtaccgtgg cgatctcgaa cagcacgccg cccggctctc gaaagtagat
     2221 cgagcgaaaa tactgccggt cccgcacttc ggtgacgttg atgcccaacc ggaccagctc
     2281 ctgccggacc cgaagctgct cgccggcatc ggcgatggcc atcgccacgt ggtgcaccgt
     2341 gcccagaccg ttcctcgccg ccggggcatc agggacgtgg agcagctcga tgatatggcc
     2401 ggggaggttg ccgttgaccg ccacccgggt gcgggaatcc gcttcgccca ccacctcgta
     2461 gcccagcacc tcggtcatga actggagcga ctgggccggc gagcggagta ccatgctgac
     2521 cctgtgcacc ccgcggatcg cgaccgctgc cccgatggtt tcgccggtcc aggggtctcg
     2581 ctggtccaag ggattggcca ccagctcgat cgccaggccg gacggatcgt ggaaggcgag
     2641 gaactcttcg ccgaagcggg atccctcgcc cgcgatcgcg atggcgtggg tcctgagccg
     2701 ggtccgccag aaatccaggg agtcaaccgg gaccgagaag gccgtgagcc cgatctgtcc
     2761 cgcgccccgg cttccaaccg gcacccccat ccccttgtag gggaaggtgg tcatgatggt
     2821 gccgggattg ccgaccgcat ccccatagta gaagtggaag acgtggtggt tgtcgaaatt
     2881 caccgtccgc ttcaccagcc gaagacccag gaggtcgccg tagaagtcga ggtcctcctg
     2941 ggcgtcgctc accgtggcgg tgacgtggtg cagactccgg atcagttttt ccacgttcct
     3001 tgtctcctcc ccgcgaggcc aacccaaaga caagctaacc aaggcaatcc gcagatgacg
     3061 cggattacac ggattacagt aatcttcatt caagtcccgg ccactcacgc caaacggcgg
     3121 ttcggttttg gtttttccaa ttaaaatcgg tgaatccgtg taattcgtgg attgctgttg
     3181 acgcggttgg ctaaggcctc agcgctggag caggaagcag gaggcaggga gcaggaagca
     3241 ggaagcagga agcaggaggc agggagcagg aagaagggag caggaagaag ggagcaggaa
     3301 gcaggagttt cctgctcccc gctccctgct ccccgctccc tgctccccgc tccctgctcc
     3361 ctgctccctg ctccctgctc cctgctccct gctccttgtg agttatggtc gaggcaggat
     3421 ccgtcccccc tgcatcaccc aaacgatcct gcgcgtgctg cggatgtcag cgaccggatc
     3481 tgtctccagc aggaccaggt cggcccgctt cccgaccgcg atcgtgccca cctcgttgct
     3541 gatgccgagg gcctcggccc cgttccgggt cgcgagacgg aggacttcca gcggtggaat
     3601 gccggcgttg accagcagtt ccatctcccg atggaagctg gttcccggcg cggcccaggg
     3661 attgggggtg tcggtcccga ccagcaagaa cacgccccga tcgtagagca gcttggtgaa
     3721 tgccaggacg gtgggccagg ccgactgggc cgcccggaac tcgtcctggg tccagcccat
     3781 gctgagcgtg aagtcttgct gccagttcct gagcagcgag ccgggcgtgg tgatcaggtc
     3841 ggggcttcgg gtgatgagcg tgtcattgcc gcgaaacatc gcttcgaagg tcaccagcgt
     3901 cggatcgatc gggatgtttc gggtggtcag ggccgtgatc atggtgtcga tctcgggcgc
     3961 ggcgaagtcc acatactcga accaggtgta catgaactgg gtgccggtaa tgctcttgag
     4021 atacgcgggc cggcgccccg gtgggaggag cctgggattc cccggaacga tatgtacgat
     4081 gccgtcgatc cccgatcggg cggcctcggt ccagctggtg aacaaggggt gagcgatcgc
     4141 cttgaggccg tgccggtgtg cctcgtcgac cccggcggca agcagcgccg gcgccaaccc
     4201 ggcgtagagc ttgatgtaat ccacgcccgc cttcgcctgg gcccgaaccg cgaccctgac
     4261 ggcggagtcg gtggcggccc ccacgcccag gcccggtgtg gtcatgaaat cgatgacctc
     4321 gccggcggca aaggtccggg gcccggggac ttcgccccga cccacccgat cccgtaatgc
     4381 caccgcctcg gccgtgggcc cggccgggtt gcggatggtg gtgactccgt acgccagaag
     4441 agcgcgcagc atctggagcg aggctgcctc atcgtacttg aagctgagcg gcggctcgcc
     4501 cgggttcttc ccgacggtca cgggcccgaa cgcgacgtgg gcatgcatgt cgatgaaccc
     4561 gggcagcagg tatcggcccg ggagctcctg gacagccgca ttccccggaa cggatatctg
     4621 tccacggcgt cccaccgccg tgattcggcc ctggctgatc acgaccaccg cgtcagggag
     4681 cgggggagcg ccggtcccat cgatcaccgt caccccgctc agtacgaccg gctgctggcc
     4741 gatgaccatc tccaccgcgg ccagaaatac cgacaccagc accgagatca gtcgcatgcg
     4801 cttctccggg aaaacaggtc ggtacagtcg gtcagtcggt cagttggacc gtcggacgga
     4861 atggtggacc gactgaccga ctgactgacc gaccgaccga ccgaccgaca gtgacagtcc
     4921 cggccccggc gatttcatga caggatcgcg acggggggct tttggtgtca ggtttcggcc
     4981 cgattcggga ctacctcaca aatggccggg agccgatgag cgggccagca gcaagaacag
     5041 agcggccgga agactggttc gcccggctcc tggccgagca cgggcccgcg gtcgcgcggc
     5101 tggccgcggt gtacgagtgg gaccgggacg aacgggagga cctggtgcag gagatcgcgc
     5161 tcgcgatctg gcgggccctg ccggcttttc gaggcgacag ctccgagcga acctttgtgt
     5221 tccggatcgc ccacaatcgg ggactgagcc atcggtggca gcgccgggaa agcgcggtcg
     5281 agctcgccga agccgagcag gtgccggacc atcgcgccaa cgtcgaagag gaggtggccc
     5341 gccgggagcg gtacgagcgc ctggccgcgg cgatccgccg gttgcccgag tcctatcgcg
     5401 tggcggtggt cttgaccctc gaagggttgt ccttgcgaga ggtgggcgag gtgctgggcg
     5461 cgggggagaa tgcggtcgcc gcccgactga cccgggcccg tcgccagctt cggatcctgt
     5521 tggaagagga gcacccatcc ggatgaatcc cgtcgccgat ccggaatggg ccggcctcgc
     5581 ggcccgatgg caggccgaag tgttgccgcc ccgactctcg gtggagcggt tgctccggcg
     5641 agaggggcgg cgccgtctgc tgatggggtt gctggtggcg gtcgaagcac tgctgtccct
     5701 caccgcggtg gcggctaccg tctcggcccg ccggcgcctg cccgagccga acggcaccct
     5761 cctgctgatc gcggcgctgg tgtatgtcgt cctggtctgg gggttcgcgc tctggaaccg
     5821 cagaggcacc tggcgcccgc tggcccggac gaccgaagcc ttcgtggcgg tctcgaagct
     5881 tcggtgccgg cgcgggctcc gctcggtccg cttcgtcgtg acggtggtga cgacccagct
     5941 gttgctgacc gccgggtggt tggtgctccg tgccgggggc gagactccag tgtggacggc
     6001 gcgggagacc ctggcgctgg cgccctcatt gtccgtcggg gtcctgtttc tgctctgggc
     6061 ggtgtggtat cggcgggtga tgctccgccg gctggcctgg ctggagcaga tgccgtctta
     6121 gccgtacctt ccaccatccg ttacctgggg ttgccgtggt tcgcgccatg tggcttctct
     6181 ctctgttacc cgccggatgg gtggtggccg ttccggctct tccggctcag gctcccgaca
     6241 cccagatcgc cgctgcggtg ctgccccttc ccgaacgcct gcgccccgcc gcgaccgtgc
     6301 tggggtatcg cgattccaag acactggtgg agctgcgcaa aggcactaac ggcgtgatct
     6361 gcctggccga tgatcccgac gtgccggcgt tccacgtcgc ctgctaccat cagtcgatgg
     6421 agccattcat ggcccggggg cgggcgctgc gagccagcgg gatcacgggc gagcaggtcg
     6481 acagcgtgcg gttccgggag atcaaacagg ggacgctcaa aatcccggcc ggaccggctg
     6541 cgctctggtc tctgagcgga ccgccgggaa gctgggactc gaccgctaac gaagtgaagg
     6601 gcggccggcc gctctacgtg atctacatcc cgttcgccac cgaggagtcg accggcctgc
     6661 cggcgacgcc ggctccggga cagccgtggc tcatgttccc tggcacgccc aaggcgcaca
     6721 tcatgttcgt tcctcgaatg aactaaaccc aggactaagg acgtcccacc acaggactaa
     6781 ggacttagtg cttaggacta agaactactt agacctgagt ccttagtcct tagtccttaa
     6841 tcctgaagcg tggcttgaac cgtgaaccgg gtgaagtaga tctcgtggcg ggattcgaac
     6901 ccggattcgg tgccgaagaa aagccagatc gcgcctgagt cattggcggt gaccgcgatg
     6961 gtctcggtcg gatcaccggc cacgttggcc tggtattgag gcggcgatgg gcagccgggc
     7021 aggccgtttc ggatgtctcc cagcaggacc gccgcgctcc ccacctggga ctgctcgcct
     7081 ttgtcgacgt tcattcgcca gctgccgtcg ccgctgagca ggcgggccgg ctgctcggtc
     7141 gaggcgcccg ccttgatcca gactgacggt ccggtcccga cggtgcatcc cgaatgctgg
     7201 ttggtggcga agtgcacctg gaatcccagc cggtaggttg cccccggctg gaaggcctgc
     7261 acctgccgcg cgaagtacat ccagagatca tcgctgatat tggtgcccgc atgatagaag
     7321 gcgggtccgc cgcccaggtt gtcgggcagc gcccgtttct cggcttggaa ttcgacagcg
     7381 gcctcctggc tcgcgagata gtccgaggac ccgatggccc aggcgctcaa ctggtcgagg
     7441 gtcaggtcga attcgaccac gatcgggtcg gtgacatcga ccgggtcgga gcaggccgtg
     7501 agggccgcca gagccagggc ggccaggcga ccaagcctgg atgtccgatg cataacgcca
     7561 gggacgccga acggccgagg tttgtgacag tgcttgcggc ctgccaccgc cgggagcaat
     7621 actcgtcgca tgcgcactct gcccctgctg ctggccacgc tgtggctccc tcgcctggca
     7681 gtggctcagg aattgtcggc cgccgagcga cgtatcaccg ccgcggtcga cgccggcgta
     7741 gcccagtcgg gccggctgct ggaacgagcg gtcaatctca acagtggaac cttcaatctc
     7801 gccggcgtca gggccgtcgg ccggctgttc cagaccgaat tcggccggct gggattccga
     7861 acccgctggc tggacgggcg ggcgtggggt cgggcggggc acctcgtggc ggagtggcgc
     7921 ggcagcggga ccggtcccaa gctgctcttc atcggccatc tggacacggt cttcgagccc
     7981 gactcgccgt tccggaagta tcagcggctc cgagattcga ccgcccaggg acccggtgtc
     8041 atcgacatga agggcggcaa cgtgatcatg ttgctggccc tcggtgccct caagcaggcc
     8101 gggctgctcg ccgggttcca ggtctccgtc gtcctcacgg gggatgagga ggaaaccggc
     8161 actccgctct ccaagggccg ggccgcgctg cttgaggcgg cgcgctgggc cgatatcgcc
     8221 atcgggttcg aggacggcga tggcgatcct cgccacgcgg tcatcgggcg gcggggatgg
     8281 accggatgga ccctcaccac caaggggagg ccgggacact cttccctgat cttcagccag
     8341 gaggtcggta gcggcgccat cttcgaggcg gcgcggatcc tggccgcctt ccgtgactcg
     8401 ctcgcgggtg aagcgaacct caccttcaat cccggcctca tcgcgggcgg atccgacgtc
     8461 acgctcgaga agaccgggga gcgggggcgc gtgttcggca agagcaacgt catcgcggat
     8521 caggccgtgg tgaccggcga tcttcgaagc ctcaccatcg aacagcggga tcgggcgaag
     8581 cagcggatgc gcgccatcgt ggggcgccac tacccgttat ccgacgccgc catcgagttc
     8641 gaggatacct atccccccat gacaccgacc gagggtaatc gccggctgct gcagctgctg
     8701 gaccaggtga gtcgtgacct cggcgccggc ccggtgagcc cggtgaaccc ggccaatgcc
     8761 ggcgcagccg atgtgtcctt caccgccggc ctggtcgaca tggcgatcga cggggtcggt
     8821 ctcaagggaa gcggaggcca ttcggtccat gagaccgccg acctccggac cctgccgatc
     8881 caggcgaaac gagtcgctat cctcatttac cgactgacga aactctaggg cagggagcag
     8941 ggagcaggga gcagggagca gggagcaggg agcaggaagc agggagcagg aagcagggag
     9001 caggaagcag gatgaccccg ctccctgctc cccgctccct gctcccttct ccctgctccg
     9061 tttttcgtgc tcttgcggtc gggtagggga ggaagcatgt tagcccccct cactcttacc
     9121 cggtggatct caagtggtgc cagctgccgc ggtcgatggc gcccttgagc gcctgatccg
     9181 caacgcggtc gacgaggtgc tggacaccgc cggccacggg gccaatgctc tgggagcagc
     9241 ggttcggcaa tgggccatcc gcctggccga cggggaggag ccggccgcgc tgtttatcgc
     9301 ggactggcgc tatccgatgc tccaattgcc ctggtggatc gagccatcgg tgcgaggagc
     9361 ccgggatctc gagtttcaac gggcgttagc ccgctcgacc gtcgccgggt actacttcat
     9421 ccgcctggtc gataacgcgg tggatgcgca cgggagcaat cgggcgctgc tggccgccgg
     9481 tggcatcttg ttttccacct ttcagcagcc ctaccagacc tacttccctc cggcccacga
     9541 cttctggatt catttccgca gcgcgtggca ggccggggcg gaagcggtgt atcgcgaagc
     9601 caggctgggt gatcagccgc tggatgatga ggcgttccag accatcgccg cgcccaaggt
     9661 ggccgcggcg accattccgg tcggcgcggt cctgctccgg gccggccggg gggatcggct
     9721 ccccgcctgg ctcagggtgt gcgagctgct cgcctgtcac gagcaaatgc tggacgatct
     9781 cttcgactgg ctccgcgacc tcaaggcgcg ccgtcccacc cgattgctca ccgaggcact
     9841 ggcgcggggc cggacccggg acggggcggt ggcctggttt ctttccgagg gcgtttcgtg
     9901 ggccctccag cggatgcagc aatggcgggc cgcgatgcga gatgccgtgc tccggctcga
     9961 gtgccccgag ttcctcgggt ttctcgaccg gcgcgccgag ctgatcgagc agtgggaagc
    10021 gtcgtggcga cccgggctgg cgacgctgtc gaagctggat gaggcatttc ctgcaggtgg
    10081 acccgcaccg gaggtagcgc gatgacgttc gagcagctgg tatcgcggat ggtttcggat
    10141 cgaaagttcc gggaaggcgt tgcccgggat cccgaaggga ccctgaaaag cgcgggcgtc
    10201 acgcccacgc ccgagatggt cagcgcgctt cgccgggtcg attatggcgc cctcaagcag
    10261 gtcggcaagt cattcggcca ggccgattcc tgtgagggag gactgttgac gtcctgaccg
    10321 cccggctcat gctggtcgct ggtctctcgg aaacgccccg tggctcggcc gcgggcgtgc
    10381 tcgggctctt ggcgggccgc ctgccggagg ccggcgaagt ggcgggtttg ttaggcgacg
    10441 tcctctgggt cgtcacctac gtgctcatca tccgggcggg tttccggagt cgggagtatg
    10501 gcatcccgct caccgccatc gcgctcaatt tcacctggga gctgatctac ggagtcctct
    10561 acccgccggg cgccgtcgcg gcccgggtgc tgcacggggc ctggctggcg ctggacttgg
    10621 tgatcgtcat tcagctggtc cgctatggca aggcggtgca gactcattcc ctgatccggc
    10681 gtttcttcta tcccatcgtg gccgtcacgc tggtgctcgc cttcataggt cacctgctct
    10741 tccggcggca gttcgttacc gcccagatca tgccggactc cgacggtctg atcagcgcct
    10801 atgccatcaa cctggtgatg agtgtgctgt tcgtgttctt cctgccgggc cggcacaccc
    10861 gggatgcgct ctcggtgggg gccgcgtgga ccaaatgcct cgggaccggg ctggtgtcgc
    10921 tggggaatta cctggcccat ctggggaatc cgcccccgct ctacaacgtg cagtaccacc
    10981 cggtgggcga ggtggcctgg accagtcttc cgccccgtca cctgctgccg gtgaacccgg
    11041 acttcctctg gtatctggcg gcgaccgtgt tcctcttcga tctgctgtat atcaggcttc
    11101 tctatcggct gccggctgct ccatcgcggc cagcaactga cccaacccca gtgcggtccg
    11161 gatgaccgct cggcggcgct cgagatcgga ttcgctgtgg caccccaatc gcacgcgaga
    11221 ccgctcgatc cccgaggccc ggcagagtcc ggcgaaccgt tccccggccg gaccgtgaac
    11281 cgccgtcccg gtgggatcgg ccgtaaatcg gggaatctcc agggcggcca gggcccgagt
    11341 ctctgctgat cggatcgact ccggcaccgg tgaggcgccg ccatcggcgc ggcggcccag
    11401 cgcctgctgg agtgcccact cccgttccgg gcgaggggcc agggtgagag ccccgctggt
    11461 ccggagcgca gcgcggtaac gctccgttgc gcgaagcagg acccgagtcc ggtgtcccga
    11521 cacagcttca tgaaactggt cgatcacgtc acgccattca ccgttgcggg cgaagcggcg
    11581 gtacattgtc acgaaaccct gctcgatcga tggggccagc cgttccagcg caatcccagc
    11641 ggaagtcaca ccgccctgat ctctccagcg gccgtcatcg cttctccggg gagcaggcag
    11701 caagccgacc cgaagcagcg aggccggatc accgggatcg cgggaccggg gcggttccca
    11761 gggaagggtc gggtggcaca aggtctcgag gtcgaccagg aaaggccgct ccccccggac
    11821 cagcagattc tcggcgtggc agtcggccgc ctgcagcccg tcaagcaatc ccagcagcat
    11881 tccgagacga cggcccaggc gggacgtcaa ccggcgcggg cccgactggg gaatcacccc
    11941 ggtcatccag gcatggcccc cggagctgac caggcggggc atccgccagc caagctcggg
    12001 atccagcccg ccgagctgtt tcagcagagc catgaaccgg acctccactc cagcgtcgcg
    12061 gggtttgaag tagaactcgc cctgggccgt tttccaggca atgacggtgt gacctccggc
    12121 atgaggatcg gagaggccgg tccgaatacc tgtcaccggt ccgccctcaa accggggacc
    12181 gaaggcatcc tggagcagca tcgtatcctc tgccaggtga ttcaggaatt gggaaacgga
    12241 gtcggtccat tgggatacga ggtgctcgat ggcccacgcc ggttcggtcg aggggtcagc
    12301 ggtcggcggc aggtattccc ggatccgggc ggcgaccgag gaccgcagat catcgcggag
    12361 caggagccag gcggaggccg tgatccgatc gggctccggt gcagcgcggc gaatctgctc
    12421 gaccgctgcc cggactcgag cggtcgacca cgaccggaag ggagcttggg cgattgggcg
    12481 ggccatgcga gagagtatac tttgggcatt cccccatggt gatgcttcgg tgaccaatca
    12541 gctgctcgag cgcctccagg ctgctctggg cgaggggttc ctcgtcgagc gggagctggg
    12601 ccggggcggc atgtccactg tctacctggt gctcgatcgg cggcatcagc gccggatcgc
    12661 ggtcaaagtg gtgaaccccg acctgggact cgatctggct gccgaccggt tccagcgtga
    12721 aatcgaagtg gcggcctccc tcaatcatcc ccacatcgtg ccgttgctgg attcgggtac
    12781 cgccctgggt ctgcgctact acaccatgcc gtacatcgaa ggtgagtcgc tgcggcagcg
    12841 gctcgaccgg gagcaccagc tgccgctcgg ggaatccctc cggctggcgc gggacgtggc
    12901 cgccgcgctg gccgccgccc acgcccgcgg gctggtgcac cgcgacatca agccggagaa
    12961 catcatgctc tccggcggcg aagcggtggt gaccgacttc ggcatcgccc gggtgatgca
    13021 gtcggccgcc ggggtcgatt ccctcaccaa gaccgggctg gtgatcggca ccccgatgta
    13081 catgagcccg gagcaggcgg ccgggaatcc ggtgatcgac ggccgcagcg acgtgtacag
    13141 cctggcctgc gtgctatacg aaatgctggt cgggcatcct ccgtttcacg gaaccacacc
    13201 tcaggagatc ctgggccggc acgcactcga tccggtgcca ccggtgcgaa gcggccgccc
    13261 tggtgttccc gaggccgtcg acctggtcct gcaggaagcg ctgtcgaagt ccccggccga
    13321 ccggctggga agcgccagtg attttgccgc catactggat gacctccgca ccaccggaac
    13381 cacggcgcgg gtcaggatct ccgccgccgg cacccgaaac tggcgccgcc ggccgctggt
    13441 gcgccgcctg gccgcggtgg tcggggtgct actgctgctg atcctggcgg tcctggccgg
    13501 gcgccaattc ggtggcggac cggccgcctc ccccggatcg cccgcccggc tggcggtcct
    13561 gccgctggtg agcgttggcc tggaagacag cgccctgttc gccgaggggc tcaccgacga
    13621 gatgacgatc cgcttggccc ggctcagcga tctggcggtg atcgcccgca acaacacgct
    13681 ggggtatcgc aacagcggca agacggtcca gcagatcggc cgcgagctgg gcgtggaata
    13741 cgtgctcgag ggacaggtgc gttggagcga gaccggggga acccggcggg tccgcgtgac
    13801 ccccagcctg gtccgggtgc tcgatggggc gcaggtatgg agcgacgcac tcgagggggt
    13861 ggtgtccgac gtgttcgcgt tgcaggcgcg gatggcccaa cgggtggctg aagcgcttcc
    13921 gatccggctc gggtcgtccg atcggcggac cctcggcacg gcggcgaccg gcagcgtaga
    13981 cgcctaccgc gaatacgtgc tggctcgctt ctactggcag cagcggaccg ggaagggcct
    14041 ggaacgagcg gtcgaccatt tcaaccgcgc gctcaagctg gacccgttgt ttgcccgggc
    14101 gtatgcgggg ctggccgaca gttacatcct gttcagccaa tacggcgtca cctcgctgcc
    14161 gcgcgacatc gcctggaccc gggcccgcga agccgccaat cgcgccctgg cgctggacag
    14221 cacccaggtg gaggcgttgg cctccctggg cgagatcatc ttctactcgg agtgggactg
    14281 ggaagaggcg gagagctatt tccggcgggc catcgcggcc gaccccaact acgcgaccgc
    14341 ccggcagtgg tattccgagc tgttgacggt aacggggcgc ttcgatgatg ccatcgtcga
    14401 ggcggatcgg ggcgcgctgc tcgatccggt atcggggatc gtgagccatg cccgggccat
    14461 cgccctgtta ggtgcgcggc gatacgacga ggccatcgcg caataccggc gggtgctgga
    14521 gatcgatccc ggcctgggct atgccaactt cggtctggtg tgggcccaca tcgcggagcg
    14581 ggattatgcc tccgccgttc gtcaaatggc tcgactgggc gacaccaccg cgctggcccg
    14641 agcttggatt cggggagccg tcgatccggc cttccggccc gaagccaggc ggacgctggc
    14701 ccgcgcccgt gacgtggtcg agcagtggcc ggccgagatc caggcgtcgg tgcacgcctc
    14761 cgtgggcaac gtggaccagg cggtggcggt actggaacgg accttccagg agaaggcgcc
    14821 caatcccccg ggcgtcaaac cgctcccgct gtatgatccg atccggcagg atccgagatt
    14881 ccgggaactg ctccggaaaa tgaacctccc tatctgaaca ggaagcagga agcagggagc
    14941 agggagcagg aagcaggaag cagggagcag ggagcaggaa gcagggagca gggagcagga
    15001 agcaggaagc aggaagcagg gagcagggag caggaagcag gcagcaggaa gcagggagca
    15061 gggagcagg
//
LOCUS       DASWKS010000511         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1770762, whole genome shotgun sequence.
ACCESSION   DASWKS010000511 DASWKS010000000
VERSION     DASWKS010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770762"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1219)
                     /locus_tag="VGA78_14505"
     CDS             complement(56..1219)
                     /locus_tag="VGA78_14505"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895139.1"
                     /translation="MKIPILYNVRSVMQRPLSTVLTAVGVGLVVAVFIGMLALANGFR
                     TALIRTGSPQNAMVLRRGADSELSSGLDRQSVSIINASPHIAAGPDGRPMVSAEVYSL
                     IPLPRPGDTNSVANVVIRGVSERAWQVRSNLTILSGRLPATGRSEICVGQKTVGRFAN
                     TQVGDVLRFVNRDWSVVCHFSAGGSSFESEIWGVNEQIMPVLRGEVFQTVTFRLADPA
                     TFEEAKRALEADRRITVDVYREADFYAQQSQLLGRILEILALLITSIMAIGAVFGAVN
                     TMYAAIGARRSEIAVLLTLGFKPRSVLASFLVESAIIAAVGGVIGCLLALPINGVVAS
                     TTNWASFSDIAFSFRVTPGLLLSGLVFAVVMGVVGGFFPARRASRMPVVQALR"
     gene            complement(1216..>2170)
                     /locus_tag="VGA78_14510"
     CDS             complement(1216..>2170)
                     /locus_tag="VGA78_14510"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9895140.1"
                     /translation="FPMPLSYANRLRTVPGVEGVTWAQWFGGKYGDGKRFFAQFAVDA
                     ESYLELYPEISLPEDQKQAFLRERGSAIIGKRLVDVFGWRLGQDITIQGTIWPGDWVF
                     TIRGIYTPTDRVLNDDMMLFRHDYLEERIGRPGIAGWYVLRIDDPNNAAQIAKTIDDQ
                     FRNSPAPTKTGTEQAFNASFATMWGNVQLLMGTIGLAVVFAILMVSANAMMMSARERT
                     GEVAVLKTIGFSDRTLFALVMAEAGILAIAGAVLGLGGAKLLYRATNFNAAGFLPGFD
                     VSTGTLVKGAAVAITLMLASGLAPALRAARLPVVQALRRVE"
BASE COUNT          392 a          742 c          706 g          330 t
ORIGIN      
        1 tgcaaaccag gtgctctccc agctgagcta ccgccccgag gaatgagaaa gatagctagc
       61 ggagcgcctg caccaccggc attcgggagg cgcgccgggc cgggaagaac ccgccgacca
      121 cccccatgac gaccgcgaag accagccccg acaacagcag gccgggcgtc acccggaagc
      181 tgaaggcgat gtcgctgaaa ctggcccagt tggtggtact ggcgaccacg ccgttgatgg
      241 gcagcgccag gaggcagccg atgaccccgc cgaccgcggc gatgatggcc gactccacca
      301 gaaaactggc cagcacgctg cggggcttga acccgagcgt gagcagcacg gcaatctcag
      361 agcggcgggc gccgatcgcc gcatacatcg tattgacggc gccgaacacc gcgccgatgg
      421 ccatgatact ggtgatgaga agcgccagga tctcgaggat ccgtcccagc agttgcgact
      481 gctgggcata gaagtcggct tcccggtaca catcgaccgt gatgcgccgg tcggcctcta
      541 gcgcccgctt ggcctcctcg aaggtggccg gatccgccag ccggaaggtc acggtctgga
      601 agacctcccc ccggagcacc ggcatgatct gctcgttcac tccccagatt tcggattcga
      661 aggaggaacc gccggcgctg aagtggcaga ccacgctcca atcgcgattg acgaaccgca
      721 gcacgtcacc aacctgagtg ttcgcgaagc ggccgacggt cttctgcccc acgcagatct
      781 cggagcgccc ggtggcaggg aggcggccag acaggatcgt caggttgctt cgcacctgcc
      841 aggcccgctc gctcacgcct cggatcacca cgttggccac cgagttggtg tcgcccgggc
      901 ggggcagggg gatcagggaa tacacctcgg cactcaccat cggccggccg tccggcccgg
      961 ccgcgatgtg gggtgacgcg ttgatgatgc tgacgctctg gcggtcgagc ccgctggaga
     1021 gctcggaatc ggccccgcgc ctgagcacca tggcgttctg gggcgagccg gtccggatca
     1081 gcgccgtccg gaatccattg gccagcgcca gcatcccgat gaagacggcc accaccaggc
     1141 cgacgccgac cgccgtcaac accgtcgaca gcgggcgctg catcacgctc cgcacgttat
     1201 agagaatcgg gatcttcatt caacccgcct gagggcctgg accaccggca gccgcgccgc
     1261 ccggagcgcg ggcgccagcc cgctggcgag catgagtgtg atggccaccg cggcgccctt
     1321 gaccagggtc ccggtgctta cgtcgaatcc ggggaggaat ccggcggcgt tgaagttggt
     1381 ggcccggtag agaagcttgg ccccgcccag gcccagcacc gcccccgcga tggccaggat
     1441 ccccgcctcg gccatcacca gcgcaaaaag cgtccggtcc gaaaagccga tggttttgag
     1501 caccgccact tcaccggtcc gttcccgcgc gctcatcatc atggcattgg cgctcaccat
     1561 caggatggcg aataccacgg cgagcccgat ggtccccatg aggagctgca cgttgcccca
     1621 catggtggcg aagctggcgt tgaaggcctg ttcggttccg gtcttggtcg gcgccggcga
     1681 gttacggaac tggtcgtcga tggtcttggc gatctgggcc gcgttgttcg ggtcatcgat
     1741 gcggagcacg taccagccgg cgatccccgg gcgcccgatc cgctcctcca ggtagtcgtg
     1801 ccggaagagc atcatgtcat cgttgaggac gcgatcggtc ggggtgtaga tgccccggat
     1861 ggtgaagacc cagtcgcccg gccagatggt gccctggatc gtgatatcct ggcccagccg
     1921 ccagccgaag acgtccacca gccgcttccc gatgatggcc gagccccgct cccgcagaaa
     1981 ggcctgcttc tgatcctccg gcagcgagat ctcgggatag agctcgaggt acgactcggc
     2041 atcgaccgcg aactgggcga agaaccgctt cccgtctccg tactttcccc cgaaccactg
     2101 ggcccaggtc acgccttcga cccccggtac cgtccggagc cggttggcgt agctcaaggg
     2161 catcgggaac
//
LOCUS       DASWKS010000512         8062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1771425, whole genome shotgun sequence.
ACCESSION   DASWKS010000512 DASWKS010000000
VERSION     DASWKS010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1771425"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="VGA78_14515"
     CDS             <1..1099
                     /locus_tag="VGA78_14515"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9895141.1"
                     /translation="TLRRGETVGQLFARQGLGSLDLSDLARIGFDPRRLQPGLIFNFK
                     RSTHAIQPSEVQVRTSPEERFRMWHAAGNWNVERQEIPWTVDRVVVGGIIGSTLYDGL
                     DAGVADDVLDGGDRMKLAWDLADVYAWSVDFSRDLQPGDRFAAVVERRVSPDGDVRYR
                     RILAATLELSGNAQTALRFAQGGPDSFYDPSGRSLRRAFLAAPVEFRRISSTFSRARF
                     HPVLRRYRAHAGVDYAANSGTPVMAAGDGTILSAGRSGGYGIMVEIRHRNGVSTRYAH
                     LRGAARGISPGKRVTQGQVIGYVGSTGLSTAPHLHYEFRVNGAPRDPRRVQMPAGPPV
                     AKAARGEFDRLREEYARLLVLPSPQPIRVAD"
     gene            1285..3078
                     /locus_tag="VGA78_14520"
     CDS             1285..3078
                     /locus_tag="VGA78_14520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895142.1"
                     /translation="MSIALISFIAVALAAASYLLLERLGSRAALPAGFRVIAWLSLGL
                     LLVNPGCPVPPDQTRPLVLLDGSLSMTAAGGRWSDALAAARAAGEVRLFGDPDRALDS
                     IPAAGRSHLGPALAATRASGRAVIVMTDGEVDDSQATIPLLRGVNVRVFPRAADRAVA
                     LESVRGQARLTQRDTLRLRIELRAAGLPASIKTSVTVRAGERNVAALPVEIENGRRSI
                     EVPVPARTLGEGDHALRIGLKDSLDPERRDDRRIHLVNVAPTPGVVLAASPGDWDSRF
                     LYRTLLDVTDLPVEGYVELIRGQWRRMSDLGSVDAGQVRQAIGLADLAIVRGPGELAT
                     AARGRAVLAWPSPAETDEALPGDWYLTAGEGPPAAGLAGMPVDSFAPSTLLLPLTPDI
                     GDWIGASVQAGRRGALRPAIIGSSRRGSRRVTIGAQGLWRWAFRGGSSEQAYRALMAS
                     LVDWLVAVEDTARGRARPVHDVVPNGLPVVFFWSGSGPPEPVPIRLRRIDTAQELADT
                     LRFDGAGRAAVRLPPAVYSYRLDGGGRGMVAVEDYSEEWFPRAPVLADAEAAAEPAER
                     RQGIRERWWLFLVAVVALCGEWVMRRRMGLR"
     gene            3264..4181
                     /gene="ftsY"
                     /locus_tag="VGA78_14525"
     CDS             3264..4181
                     /gene="ftsY"
                     /locus_tag="VGA78_14525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX9895143.1"
                     /translation="MDRVTAAKKLGFWGKLKRLALTDVGALVRGLNADDVEALERVML
                     ESDFGLPATAELTDWVDGEIRGGKLKTEADLKRAMSARLTLLLQGPQDPGALARSGTP
                     PTVILVVGVNGVGKTTTIAKLARRLLKQGEQVLLAAGDTYRAGAIQQLNIWAGRLGIP
                     CVAGAPGGDPAAVAFDAVEAAQARGIDWVIVDTAGRLHTQEGLMEELRKVARVIARRA
                     PGGPHETLLVLDGSVGQNAVQQGKLFTQAVPLTGLVVTKLDGTARGGAVVALRRELDL
                     PIRFLGRGEKAADLEVFDPRKFAEELLAE"
     gene            4199..5725
                     /locus_tag="VGA78_14530"
     CDS             4199..5725
                     /locus_tag="VGA78_14530"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX9895144.1"
                     /translation="MFLDLAVGRLVEPLTGKEWSRSDILRRLVARRGYYRANGLNSGD
                     RVFIHFGNSAEFLIEVLALWSAGGCVVPVDPRFTPFEIETLAQWARPRFSLWEHPPDN
                     ELATSLSTLAIELVDLSAIDLDAAPAPGTDNGRSTDLRLDQDALVLFTSGTTGQPKGV
                     VHTHRSLRARWMSLRHSLGLESFQRTLCLLPTHFGHGLICNCLFPWLSGQDLFLLPPF
                     KPDILSRLGAIVDEHRITFLSSVPSVWRLALRIAPPPRDRTLQRVFIGSAPLSAALWE
                     GVRDWTGTRQVLNAYGITETGSWLAGTTMPDFSPEDGLVGVPWGGIVRILRNGSPEIL
                     FDPDGECAPGDPGQVWVHTPALMRGYLDRDDLTAQVVSMGWFATGDIGLRDDRGWLYL
                     RGREREEINKGGMKVHPADIDAVVERFPATAEVCCFGYPDTLLGEDVGIAVVLLTQDE
                     ETLRALFAWATRHLARHQMPQRWFLVEEIPRTSRGKVNRVSVAQRCSTLAPIDLSALR
                     "
     gene            5735..6019
                     /locus_tag="VGA78_14535"
     CDS             5735..6019
                     /locus_tag="VGA78_14535"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX9895145.1"
                     /translation="MASLRDELMAQLPKWGADRNGDLRDDTSLIQSGRVDSLGLFELL
                     LWIEAKTGGRLDPTSLDLPREWDTVADIVQYVTRRRQEQRKASQAGDGAQ"
     gene            6016..7131
                     /locus_tag="VGA78_14540"
     CDS             6016..7131
                     /locus_tag="VGA78_14540"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9895146.1"
                     /translation="MTSYEIVGYGPHLKDEVAQLQRHLWSPDSGLNRRYLEWKYERNP
                     YFPEAHIYLARSGGRIVGMRGAVGTAWQVGTASEVVLVPSPDDFVVAPEHRNSGVAAL
                     IMQAVFADLTAGGFEHVFSLSSGRVAALSSLATGWKSAGAMEPVARLSRRRRIRADLE
                     HQKLFWRLAPLLGDGVTSRRSFVRLDRAGHRLEARPGGTISVERTPRPEAMAALIQRL
                     DYDGRIRHVRDAAYFAWRFQNPLHEYRFLVFESAERLEGYLVLRRYVSESAQASRTHI
                     VDWEASSASVRNELLQVAIAHAGFAELGAWTGTLDEDSRRTLIQSGFEPAEPTLRARG
                     FPCVLVRPLGQADWTLHGRRLLDPGQWDVRLLFSMRG"
     gene            7142..>8062
                     /locus_tag="VGA78_14545"
     CDS             7142..>8062
                     /locus_tag="VGA78_14545"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895147.1"
                     /translation="MPTLRLDTPVKFLKGVGERRAEAFGRLGIHTAQDLLWHLPFRYI
                     DASSVTPLAKAEVGADVACVGRVVNKGVLPTRRGLRIFHAVLRDASGLLECVWPGQAF
                     LDRSIELGQVVLVAGPVRYYHGRQMQPREHLVLSEAGPESDGDLVAKGKVLPVYPATE
                     GLSHKQIRGLIDRHLDQLVALTPEAMAPGVLKELGLAPVGEALRSVHRPVALEDAERG
                     RRRLAFDELMDLQLMLGRARLLARTGRQGIRFEVKRDLTTRLRESLPWELTDDQKQAL
                     REITGDMTSPERMHRLLMGDVGTGKTVVALF"
BASE COUNT         1194 a         2648 c         2847 g         1373 t
ORIGIN      
        1 tacgctgagg cggggcgaaa ccgtgggcca actgttcgcc cgccagggac tgggttcgct
       61 cgatctgtcg gacctggccc gcatcggctt cgaccctcgc cggctccagc ccggcctgat
      121 cttcaatttc aagcggtcca ctcacgccat ccagccgtcc gaggtccagg tccgcaccag
      181 tcccgaggaa cggttccgga tgtggcacgc ggcggggaac tggaacgtcg agcgacaaga
      241 aatcccctgg accgtggacc gggtcgtggt gggcgggatc atcggttcga ccctctacga
      301 tgggctggat gccggggtcg ccgacgacgt gctcgacggc ggcgatcgca tgaagctggc
      361 gtgggacttg gccgacgtgt atgcctggag cgtcgatttc agccgtgatc tgcaaccggg
      421 cgaccggttc gccgcggtgg tggagcggcg ggtgtctccc gacggtgacg tgcgttaccg
      481 gcggatcctg gcggcgactc tggagctctc cggcaacgcc cagaccgcgc tgcggttcgc
      541 tcagggagga ccggactcgt tctatgaccc cagcggccgc tcgctccggc gtgctttcct
      601 ggccgctccg gtagagttcc ggcggatcag ctcgaccttc agccgggccc gctttcatcc
      661 ggtgttgcgc cggtatcggg cgcatgccgg cgtggattac gcggccaact ccggaacgcc
      721 ggtgatggcg gcgggcgacg gtaccatcct gagcgctgga cggtcgggcg gatacggcat
      781 catggttgag atccggcatc gcaacggggt cagtacccgc tacgcccatc tgcggggtgc
      841 ggcccgggga atctcacccg gcaagcgggt gacccagggc caggtcatcg gctacgtcgg
      901 ctctaccggc ctctctaccg ccccgcatct gcactatgag ttccgggtga acggcgctcc
      961 gcgggatcct cggcgggttc agatgccggc cggaccgccg gtggccaagg ccgcccgggg
     1021 tgagttcgac cgactccggg aggagtacgc ccggctgctg gtgctgcctt cgccccaacc
     1081 gattcgagta gccgactaac caaccaaacc aaaccaaacg ttcctggttc cgggttccag
     1141 gttcccggta cggtgcagcg tgcggtgccg agtgccgcgc ctgtgctgag gtgcacttcg
     1201 caccccggca cgttgcaccg cacccagcac cgcaccggga accgggaacc acggaaccag
     1261 gaacttgacg gttagattag cgcgatgtcc atcgcgttga tcagcttcat tgcagttgcg
     1321 ctcgctgccg ccagctacct cctgctggaa cggctcggtt cccgcgcggc cttgccggcg
     1381 gggttcagag tcatcgcgtg gctttcgctg ggcctgttac tcgtcaatcc cgggtgtccc
     1441 gtgccgcccg accagacgcg gcccctggtc ctgctggacg gctcgctcag catgaccgcc
     1501 gccggcgggc gatggagcga cgcgctcgcg gcggcccggg ccgcgggtga agtgcggctg
     1561 ttcggcgatc ccgaccgggc cctcgattcc attcccgccg cgggccgctc gcacctgggt
     1621 ccggccctgg cggccacccg ggccagcggc cgagccgtga tcgtgatgac cgatggcgag
     1681 gtggacgatt cgcaggcgac gatccccctg ctgcgggggg tgaacgtgcg ggtgttcccg
     1741 cgcgccgccg atcgcgcggt ggctctcgaa tcggtccgag gccaggcccg tctcactcag
     1801 cgtgacaccc tccggctccg gatcgagctc cgggcggcgg gcttgcctgc cagcatcaag
     1861 accagcgtga ccgtccgcgc cggcgaacgc aacgtcgccg cgctgccggt ggagatcgaa
     1921 aacggccgcc gcagcatcga ggtgccggtg ccggcccgaa cgctgggcga gggcgatcac
     1981 gcgctgcgga tcgggctcaa ggattcgctc gacccggaac ggcgcgatga ccgtcggatc
     2041 cacctggtga acgtggcgcc cacccccggc gtggtcctgg cggcttcccc gggtgactgg
     2101 gacagccggt ttctgtatcg caccctgctc gacgtgaccg acctcccggt cgaaggatac
     2161 gtggagttga tccggggaca atggcgccgg atgtcggacc ttgggtcggt ggacgccggc
     2221 caggtgcgac aggccatcgg cctggccgat ctggcgatcg tgcgcggccc gggtgaactg
     2281 gcgaccgcgg cgcgggggcg cgcggtcctc gcgtggccct caccggctga aacggacgag
     2341 gcgctgccag gcgactggta tctcacagcc ggtgagggac cgcccgccgc ggggctggcc
     2401 gggatgccgg tggattcctt cgccccgtcc accttgctgt tgcccctcac ccccgacatc
     2461 ggtgactgga tcggcgcctc ggtccaggcg ggccgccggg gagcgcttcg tcccgccatc
     2521 atcgggtcat cccggcgggg gagccgccgg gtcacgatcg gggctcaagg cctgtggcgc
     2581 tgggccttcc ggggcggctc cagcgagcag gcctatcggg cgctgatggc gtccctggtc
     2641 gattggctgg tggcggtgga ggataccgcc cgaggccgag ctcggccggt gcatgacgtg
     2701 gtgccgaacg ggctcccggt ggtgtttttc tggagcggca gcggaccccc ggaaccggtg
     2761 ccgattcggc tgcggcggat cgacacggcg caggagttgg cggacaccct tcgctttgac
     2821 ggtgccggcc gagccgcggt ccggctcccg ccggcggtct atagctatcg cctcgatgga
     2881 ggggggcgcg gtatggtggc ggtggaggac tattccgaag agtggtttcc gcgcgccccg
     2941 gtactggccg acgcggaggc cgccgccgag ccggccgagc gccggcaggg gatccgagaa
     3001 cggtggtggt tgtttctggt ggcagtcgtg gcgctctgcg gggaatgggt gatgcggcgg
     3061 cggatggggt tgagatgaat gcagaatgca gaatgcagag tgcaggctgc agatgggtca
     3121 ctcaagcgat caacccgagc gaaaccgaga gatccaactc ggctggcttg agggcctggt
     3181 tgtgatcgac atgacgagac gcgtgcgtcc cctctgaatt ctgcattctg cactctgcat
     3241 tctgcattca ttagtttccg cccatggacc gcgtcaccgc agccaagaag ctgggattct
     3301 ggggcaagct caagcgcctg gcgctcaccg acgtgggcgc gctggtgcgg gggctcaatg
     3361 ccgacgacgt cgaggcgctg gaacgggtga tgctcgagtc cgacttcggg ctcccggcga
     3421 cggccgagct caccgactgg gtcgacggcg agatccgggg tggcaagctc aagaccgagg
     3481 ccgatctgaa gcgggccatg agcgctcgac tgaccctgtt gctgcaaggg ccccaagatc
     3541 cgggcgcgct ggcccgttcc gggacgccgc ccaccgtgat cctggtggtg ggcgtcaatg
     3601 gggttggaaa gaccacgacc attgccaagc tggcccgccg gctgctgaag cagggtgagc
     3661 aggtgttgct cgcggcgggc gatacctatc gggccggggc catccagcag ctcaacatct
     3721 gggccggccg gttaggcatc ccctgcgtcg caggcgcgcc cggtggcgat ccggcggccg
     3781 tcgccttcga cgctgtcgag gcggcccagg cccgcggtat cgactgggtg atcgtcgaca
     3841 ccgcggggcg gctccatacc caggaagggc tgatggagga gctgcgaaag gtggcgcggg
     3901 tcatcgcccg gcgcgcgccc ggcgggcccc atgagaccct gctggtcctg gacggttccg
     3961 tgggccagaa cgcggtgcag cagggcaagc tcttcaccca ggcggtcccg ctgaccggcc
     4021 tggtggtcac caagctggac ggaaccgccc ggggcggggc cgtggtggcg ctccgccgtg
     4081 agctcgacct cccaatccgc tttctgggac ggggcgagaa agccgcagat cttgaggtct
     4141 tcgatcccag gaaattcgcc gaggaactgc tggccgagta acggcaacca ggagtcgcat
     4201 gtttctcgat ctcgcggtgg gccggctggt cgagcccctc accgggaaag agtggagccg
     4261 gtccgacatc ctgcgccggc tggtggcccg ccgtggatac taccgcgcca acggcttgaa
     4321 ctccggcgac cgggtcttca ttcatttcgg aaacagcgcc gagtttttga tcgaagtcct
     4381 ggccctgtgg agtgcgggcg gctgtgtcgt accggtcgac ccgcgcttca cacccttcga
     4441 gattgagacc ctggcccagt gggcccgtcc ccgtttctcg ctctgggagc acccgccgga
     4501 caatgagctg gcgacgtctc tctcgaccct cgccatcgag ctggtggacc tctccgccat
     4561 tgatctcgac gccgctccag cgccagggac ggataacggt cgatcaaccg atctccggct
     4621 cgatcaggac gccctggtcc tctttacctc cggaaccacc gggcagccga agggcgtggt
     4681 gcacacccat cggtcgctcc gcgcccggtg gatgagcctg cgccactctc tcggcctcga
     4741 gagcttccag cggacgctct gccttctgcc cacccacttc ggccacgggc tcatttgcaa
     4801 ctgcctgttt ccctggcttt cgggtcagga tctttttctc ctcccgccgt tcaagccgga
     4861 catcctgtct cgcctcgggg caatcgttga cgagcaccgc atcaccttcc tgtcttcggt
     4921 tccctcggtc tggcgattgg ccctccgcat cgccccgcct ccccgggacc ggactctgca
     4981 gcgagtcttc atcggctcgg ctccgctttc cgcggcgctg tgggaagggg tgcgagactg
     5041 gaccggtacc cggcaggtcc tcaacgccta cgggatcacc gagacgggga gctggctcgc
     5101 cgggaccacg atgccggact tcagccccga ggacggcctg gtcggcgtgc cctggggcgg
     5161 gatcgtgagg atcctccgga acggaagccc cgagattctg ttcgatcccg atggcgagtg
     5221 cgccccgggc gatccgggac aggtatgggt ccatacgccc gcgctgatgc gggggtatct
     5281 ggaccgggac gatctcaccg cccaggtggt gagtatgggt tggtttgcca ccggcgatat
     5341 cgggctgaga gacgatcgcg gttggctcta cctgcggggg cgggagcgcg aggagatcaa
     5401 caaaggcggc atgaaggtcc accccgctga catcgacgca gtggtcgagc ggtttccggc
     5461 cacggccgag gtctgctgtt tcggctatcc cgataccctg ctgggcgaag acgtaggcat
     5521 cgcggtggtg ctccttaccc aggacgagga aacgctccgc gcgctgttcg cctgggcgac
     5581 gcgtcatctg gcccggcatc agatgccgca acgctggttt ctggtcgagg agatcccgcg
     5641 cacgtcgcgg ggtaaggtga accgcgtcag tgtcgcgcaa cgctgctcga cgctcgcccc
     5701 gatcgacctt tccgcactgc gatgaagggg ccgcgtggct tccctgcgtg acgagctgat
     5761 ggcccaactt ccgaaatggg gggccgaccg gaacggcgac ctgcgcgatg atacctcgct
     5821 catccagtcg ggtcgggtcg attccctggg actcttcgaa ctgctgctgt ggatcgaagc
     5881 caagaccggg ggccgcctgg atccaaccag cctcgacctg ccgcgggaat gggacacggt
     5941 ggccgacatc gtacagtatg tcacccgtcg ccggcaggag cagcggaagg cgagccaggc
     6001 cggcgacgga gcccaatgac cagctatgag atcgtcgggt atggtcctca cctcaaggac
     6061 gaggtggcgc agctccagcg ccacttgtgg agccccgact ccgggttgaa ccggcgctat
     6121 ctggagtgga agtatgagcg caacccctac ttccccgaag cgcacatcta cctggcccgg
     6181 tccggcggac ggatcgtcgg aatgcgcggg gcggtcggca ccgcctggca ggttggcacc
     6241 gcatcggagg tggtgctggt gccctcgccc gacgacttcg tggtcgcccc cgagcatcgc
     6301 aactccgggg tcgctgccct gatcatgcag gccgtgttcg ccgacctcac ggctggcgga
     6361 ttcgagcatg tcttcagcct gagcagcgga cgggtcgcgg ccctcagttc gctggcgaca
     6421 ggttggaaga gcgcaggggc catggaaccg gtcgctcggc tgagtcggcg gcggcgaatc
     6481 cgggcggacc tcgagcatca gaagctgttc tggcgtctgg cgccgctcct gggagacggg
     6541 gtcaccagcc gacggtcctt cgtgcgactg gaccgggcgg gtcaccgatt ggaagcccgg
     6601 cccgggggca cgatctcggt ggagcggacg ccccgtcccg aggcgatggc cgcgctcatt
     6661 cagcggctcg attacgacgg tcggatccgg cacgtacggg acgcggccta cttcgcctgg
     6721 cgcttccaga acccgctcca cgaataccgg tttctggtct tcgagtcggc cgagcgccta
     6781 gagggatacc tggtgctgcg ccgctacgtg tcggagagcg cgcaggcttc ccggacccac
     6841 atcgttgatt gggaggcgtc ctcggcctcg gtgcggaatg agttgcttca ggttgccatc
     6901 gcccacgcgg ggtttgccga gctgggggcc tggaccggaa ccctggatga ggacagtcgg
     6961 cggaccctca tccagtccgg gttcgagccg gccgagccca cattgagagc acggggcttt
     7021 ccctgtgtcc tggtgcggcc tttgggccag gccgattgga ccctccacgg ccgccggctc
     7081 ctcgacccgg gccagtggga tgtgcggctg ctgttctcca tgcgaggata aacggggccc
     7141 gatgccgacg ctcagattgg atacgccggt caagttcctg aagggggtcg gcgaacggcg
     7201 ggccgaggca ttcggccggc tgggcatcca taccgcgcag gacctgctgt ggcatctccc
     7261 cttccgctac atcgatgcat cctcggttac cccgttggcg aaggccgaag tcggggccga
     7321 tgtcgcctgc gtaggccgag tggtcaataa gggcgtgctc cccacccggc gggggctcag
     7381 gatcttccat gcggttttgc gagacgcgag cgggctgctc gagtgtgtct ggccggggca
     7441 ggcgttcctc gaccgctcca tcgagctggg gcaggtcgtc ctggtcgccg gtccggtgcg
     7501 gtactaccac gggcgccaaa tgcagccccg ggagcacctc gtgctgtccg aagccggtcc
     7561 cgaaagcgat ggcgacctgg tggcgaaggg aaaggtgttg ccggtctacc ccgccaccga
     7621 aggcctgtcc cacaagcaga tccgggggtt gatcgaccgg catctcgacc agctggtggc
     7681 gctgaccccg gaggctatgg cgccgggggt cctgaaagaa ctcgggctcg ctccggtggg
     7741 tgaagcgctc cggtcggtgc atcgcccggt cgccctggaa gacgcggagc ggggccggcg
     7801 tcgtctggcg ttcgacgagc tgatggacct gcagctgatg ctaggccggg cccggctgct
     7861 ggcgcggacc gggcgccaag gaatccgttt cgaagtcaag cgcgacctca ccacccgcct
     7921 gcgcgagtcc ttgccctggg aattgaccga cgaccagaaa caagcgctgc gggagatcac
     7981 cggcgacatg acgtcgccgg agcggatgca tcgcctgctc atgggagatg tcgggaccgg
     8041 caagacggtc gtcgcgctct tt
//
LOCUS       DASWKS010000513         4689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3237188, whole genome shotgun sequence.
ACCESSION   DASWKS010000513 DASWKS010000000
VERSION     DASWKS010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3237188"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VGA78_14550"
     CDS             <1..834
                     /locus_tag="VGA78_14550"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9895148.1"
                     /translation="YNVEYGGRVHHAIHPDPYRSPFSGTPEEIASKSVADLRDVIRYS
                     TPGRVAAFIAEPIGGVGGVTYGAPNYLREAYAVAREHGGLCIADEVQTGFGRTGEHFW
                     GFQHWGVVPDIVTMAKSIGNGLPLAAVTTRREIAQALTQRLHLNTFGGNPVSCAAGLA
                     VLEVIDEEQLQENARRQGARLKRGLEELMSRHRLVGDVRGMGLMVGVELVEDRATRVP
                     ARAATTAVLETAKELGLLLGRGGLDGNVLRIKPPLCITADDVDYALEVLDRSLAGAQR
                     G"
     gene            932..2413
                     /locus_tag="VGA78_14555"
     CDS             932..2413
                     /locus_tag="VGA78_14555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895149.1"
                     /translation="MRSRSLSLLLFVATSLAGTPVRAQEQINRVKSAPQDYRDRQIRL
                     EGEVVELRGFSPRSGQGIYRLVDASDRVGVLIRTDQLPSSGGPFKVRARLSPELLSDG
                     VLLLDESDRSAARLPLLPVAGTLGGIGLLVAVVAFAMLLRTRHKERHLRLSPPMWLIP
                     TGGEGHPEAAAGPEVRFNYHLQYIEEERSELFDRKKRTLLGLLAIASGVGVAGTGWFA
                     LLSREDAARPSFVLMTPDLEATGSLPREVQSGRDTTVARRPDDTLRLGLEQPPETDPR
                     TPPRPPPGTPRRQVAQEPPPSRVTPTPPRNRPDTTRRVVVAAQPPPPVVRETTRAPAA
                     PPVVLPLPLPPPPPPPAPPPVPVVPPSDTAAVRPATNPETLRTGASVELRAGIDRLVE
                     AIRTRQAGVVERMYVPDQAEGARRKARFVGFLKETWPGASLAGMETVAVTETSGGTSF
                     TLQFRWRGDFGVDRRKAVRFWASARHEGSRWAFSGVRLLENFP"
     gene            2430..2984
                     /locus_tag="VGA78_14560"
     CDS             2430..2984
                     /locus_tag="VGA78_14560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895150.1"
                     /translation="MFRSLLVAGLALVGWAESSAAQSLQRWSIQGSGAVVFPTAAETD
                     FQNEARLGWEAQVRYTFSRFSLGAGYQRSTVYRFETGDFSAAVSVGFLEPRYVLLAST
                     LAALYVAGRAGVGQLVCSPAADCVEQEIDVALGGGGGILLRLSRRVAMDIGSQYFSTR
                     YDVAGGAKRRAGYVLARLGLSIGL"
     gene            2994..>4689
                     /locus_tag="VGA78_14565"
     CDS             2994..>4689
                     /locus_tag="VGA78_14565"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9895151.1"
                     /translation="MISARLRLLGVIALGACASDGTGAGEVLVVAQIDIQPPGAGLVV
                     GGTQQLTAIPKTNSGISVPGRQVTWYTSDERIATVSGTGLVTAVALGQANITARVDQI
                     TASVPVNVSPKPVATIELQPPTAELLVGHSVQLVVTMRGADGDVLTDRPATFLSDNPA
                     IASVSTTGAVVAVAVGQTVVRARSEGKEGTSTITVAARPAARLGFTTQPSNATAGQAF
                     GPVRVAVQDEIGGTVTGATNQVTLELSDNPGNATLTGPLTVTAVAGIATFANLVLNKA
                     GTGYTLRATSGSLSPAISSPFSITAGPATALGITTQPPGSAQSGVPLTQPPVVQVQDD
                     HGNPVGQAGVQITAVMVGAGATLSGTTTATTNPSGTATFTGLVISGAAGTYQLRFTAT
                     GFTPAVSSDILLSSSALSIVTQPPTNATNGALLSQQPVVRIVDGAGTPVPQGGVIVSV
                     ALSGTGGVLSGALSVNTDGAGVASFSGLTITGTAGAFRLVFSAPGVASVTSAPIVLGA
                     GAAAQVRVAVQPPASAQSGTPLAPQPEIQVADQSGNPVSTAGISVAASLASGTGTLG"
BASE COUNT          700 a         1606 c         1647 g          736 t
ORIGIN      
        1 tacaacgtgg aatacggcgg ccgggtgcat catgcgattc accccgatcc gtaccgcagt
       61 cccttcagcg gcacgccgga ggagatcgcc agcaagagcg tggcggacct gcgcgacgtg
      121 atccgctatt ccacgcccgg ccgggtcgcg gccttcatcg cggagccgat cggcggtgtg
      181 ggcggcgtca cgtatggcgc ccccaattac ctgcgggaag cctacgccgt ggcccgggag
      241 cacgggggcc tctgcatcgc ggacgaagtg cagaccgggt tcggtcgcac cggcgagcac
      301 ttctggggct tccagcattg gggcgtggtg cccgacatcg tcaccatggc caagagcatc
      361 ggcaacggcc tgccgttggc cgcggttacc acccgccggg agatcgctca ggccctgacg
      421 cagcggctcc acctcaatac cttcggcggc aatccagtct cctgcgcggc gggactggcc
      481 gtcctggagg tgatcgatga ggagcagttg caggagaatg cccgccggca aggggcccgg
      541 ctcaagcgcg ggctcgagga gctgatgagc cggcatcgcc tggtgggcga tgtccgcggg
      601 atggggttga tggtgggcgt ggagctggtc gaagaccgcg ccacccgggt tccggcgagg
      661 gccgccacca cagccgtgct ggagaccgcc aaggagctgg gcttgctgct cggccggggc
      721 gggctcgacg gcaacgtgct ccggatcaag ccgccgctct gcatcacggc tgacgacgtc
      781 gattacgcgc tcgaggtgct cgaccggtcg ttggccggcg cccagcgggg ctagggccgg
      841 ctcatccacg atagtggcaa tctccgaggc ctaccaccca aataacgtgc tgttgggcta
      901 gctttgggtt tacctcgaaa ccccgtctcc gatgcgatcc cgctctctaa gcctgctgct
      961 gttcgtcgcg acctcactcg cgggaacacc ggtgcgggcc caggagcaga tcaaccgggt
     1021 taaatcagca ccgcaggact atcgcgatcg ccagatacgg ctcgaaggcg aggtggtgga
     1081 gctgcgcggc ttttcacccc gctcgggcca ggggatctac cggctggtgg atgccagcga
     1141 ccgggtgggc gtgctcatcc ggaccgacca gctacccagc agcggtggcc ccttcaaggt
     1201 gcgggcgcgg ctctcgccgg aattgctgag cgacggcgtg ctgctgctgg acgagtcgga
     1261 tcgttcggcc gcccgcctgc cgttgttgcc ggtggccggc accctgggcg ggatcggcct
     1321 gctggtagcc gtggtcgcct ttgcgatgct gctccgaacc cgccacaagg agcggcatct
     1381 gcgcctgagc cctcccatgt ggctcattcc cacgggaggc gaagggcacc cggaggccgc
     1441 ggcgggaccc gaagtccggt tcaactatca cctgcagtac atcgaggagg aacggtcgga
     1501 gctgttcgac cggaagaagc gcaccctgct gggtctgctg gcgatcgcaa gtggtgtggg
     1561 ggtggccggc accggctggt tcgccctgct gagccgggaa gatgccgccc ggccctcctt
     1621 tgttttgatg acgccggact tggaagccac cggttctctc ccccgagaag tgcagagcgg
     1681 acgcgacacg actgtggcgc gccgtcccga cgataccctg cggctggggc tggaacagcc
     1741 cccggagacg gatcctcgga cacctccgcg ccccccgccc gggacccctc gccggcaggt
     1801 ggcccaagag cctcccccat cgcgcgtgac gcccacccca ccccggaacc gacccgatac
     1861 cacccggcgg gtggtggttg cggcccagcc tcctcctccg gtggtccgcg agacgacgcg
     1921 cgccccagcg gcgccaccgg tcgtgctacc gctgccgtta ccaccgccgc cgccgccacc
     1981 agcacctcca ccagtaccgg ttgtgccacc ctcggataca gcggctgtcc ggccggccac
     2041 caaccccgag acgctgcgga ccggggcgtc ggtcgaactc cgagcgggaa tcgaccgcct
     2101 ggtcgaggca atccggaccc gccaggcggg agtggtcgag agaatgtacg tgccggacca
     2161 ggcggaaggc gcccgccgga aggcacgatt cgtgggtttt ctgaaggaaa cctggcccgg
     2221 cgccagcctg gcggggatgg aaacggtggc agtgaccgag acttccggcg gcaccagctt
     2281 tacgttgcag ttccgctggc gaggcgattt tggggtcgac cgccgcaagg ccgtgcgctt
     2341 ctgggcctcc gcccggcacg aagggtcgcg ctgggcattc tccggcgtgc gactgctcga
     2401 aaacttcccc tgacagtaga gagggtcccg tgttccgatc cctgcttgtg gcgggtttgg
     2461 cactggttgg gtgggccgag tcgtcggcgg cccagtccct gcaacggtgg tcgattcagg
     2521 gatccggcgc cgtggtgttc ccaaccgccg cagagactga cttccagaat gaagcccgcc
     2581 tcgggtggga agcgcaggtc cggtacacct tctcccggtt ctccctggga gcaggctatc
     2641 agcgatcgac ggtgtaccgg ttcgagactg gcgacttttc ggcggcggtg tcggttggct
     2701 ttctcgagcc gcgctacgtg ctgctggcga gcacgctcgc ggccctttat gtggccggcc
     2761 gggccggggt cggacagctg gtgtgcagtc ccgcggcgga ctgcgtggag caggaaatcg
     2821 acgtcgcatt gggcggcggc ggtggaattc tcctccggct cagccggcgg gtggccatgg
     2881 acatcggatc acagtatttc agcacccgat acgacgttgc aggtggggcc aagcggcgcg
     2941 ccgggtatgt tctggcgcgg ctgggcctga gcattggtct ttaaccctac cgcatgattt
     3001 cagcccggct tcggctgctc ggcgtcatcg cgctcggcgc ctgtgccagc gacggcaccg
     3061 gggccggtga agtgctggtc gtcgcccaga tcgatatcca gccccccggt gccggcctgg
     3121 tggtcggtgg tacccagcaa ctcaccgcga tccccaagac caacagcggc atttcggttc
     3181 cgggccgcca ggtcacctgg tacacctcgg atgagcggat cgcgaccgtg tccgggaccg
     3241 gactggtgac ggcggtggcg ctgggccagg ccaacatcac cgcgcgggtg gaccagatca
     3301 ccgcgagcgt gccggtgaat gtctcgccca agccggtggc cacgatcgag ctgcaacccc
     3361 cgacggcgga acttctggtg ggccactcgg tgcagctggt ggtcaccatg cggggcgcgg
     3421 acggcgacgt gctgaccgat cgccccgcca ccttcctgag cgacaacccg gccattgcca
     3481 gcgtctccac caccggcgcg gtggtggccg tggcggtggg ccagacggtg gtccgggccc
     3541 gatccgaagg caaggaaggg acctcgacca ttacggtggc ggcccgtccc gcggctcggc
     3601 tgggattcac gacccagccg tcgaacgcga cggccggcca ggccttcgga ccggtccggg
     3661 tggcggtgca ggatgagatc ggcggcacgg tgaccggagc caccaaccag gtgacgctgg
     3721 agctgtcgga caacccgggc aacgccaccc tgaccggacc gctgacggtc accgcggtcg
     3781 ccgggatcgc gaccttcgcc aacctggtgc tcaacaaagc ggggacgggg tacaccctgc
     3841 gcgccacctc gggatcgctc agtcccgcga tcagcagtcc cttctccatc accgccggcc
     3901 ccgcgacggc gttgggcatc accacccagc cgccgggctc ggcccagagc ggggtcccgc
     3961 tgactcagcc gccggtggtg caggtccagg acgaccacgg caatccggtg ggccaggcgg
     4021 gcgtgcagat caccgcggtc atggtgggag ccggggccac gctgagcggc accacgaccg
     4081 cgaccaccaa tccgagcggt acagcgacct tcaccggcct ggtcatctcc ggcgcggccg
     4141 gcacttacca gcttcggttt acggctacgg ggttcacgcc ggcagtctcg agcgacatcc
     4201 tgctctcctc gtcggcgctg tcgatcgtga cacagccacc gaccaacgcc accaacggtg
     4261 ccctgttgtc gcagcagccg gtggttcgga tcgtggacgg cgccggcacg ccggtcccac
     4321 agggcggcgt gatcgtttcg gtcgcgctca gcggaaccgg gggcgttctg agcggcgcgc
     4381 tgtcggtcaa caccgatggc gcgggggtag cctcgttctc cggtctgacc attaccggca
     4441 ccgcgggagc gttccggctg gtcttctcgg cgccgggagt ggcctcggtg acctcggcgc
     4501 cgatcgtgct cggggccggc gccgcggccc aggtccgggt agcggtccaa ccgccggcct
     4561 cggcccagag tgggacaccg ctcgcgcccc agcccgagat tcaggtggcg gaccagagcg
     4621 gcaacccggt gtcgaccgcc gggatctcgg tggccgcgtc gctcgcgtcc ggcaccggca
     4681 cgttaggcg
//
LOCUS       DASWKS010000514        16135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_272656, whole genome shotgun sequence.
ACCESSION   DASWKS010000514 DASWKS010000000
VERSION     DASWKS010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16135
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272656"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VGA78_14570"
     CDS             complement(<1..1043)
                     /locus_tag="VGA78_14570"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895152.1"
                     /translation="MGVDRLVALVGLLLPVTRSVAQSQDLTVRLEAYFAQRPEGPFSG
                     VVLVARGGRVVFERGYGFADADLGVRNTPQLRFGIGSLTKPITATTVMRLAERGALRL
                     TDSICSYLPRCPDAWHLVTISHLLSHTSGIPDLFGELPAAAVDSTRYVIDAAIGRHIG
                     DSLRSRPGERYAYSNFNYFLLGYALEIIGRAPWETLLRREVFQPAGMQATAYDDVWRI
                     MPRRARGYVRVGGELRHIEYHDHSAYAAGGLLSTARDLLGFDVALSAGRLVHDSTYRL
                     MTTPVLGDYGLGWQIVTVFGRRLVNHTGGANGFASHLAHFEDGTTIVLLSNVEGAAAA
                     KATSCDVAAVVFGL"
     gene            complement(1131..4202)
                     /locus_tag="VGA78_14575"
     CDS             complement(1131..4202)
                     /locus_tag="VGA78_14575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9895153.1"
                     /translation="MLNHLIAWSLRNRTLVLAAAALLLVAGGWTAARMPVDVFPDLTA
                     PTVTVLTEAHGMAPEEAEALVSFPIEAGVNGATGVRRVRSSTAQGISVVWVEFDWGVD
                     IFRARQIVSEKLQTVAAGFPDGIAAPVLAPISSVMGEIMMIGLTGPSSPQDLRTVADW
                     TIRRRLLAVHGVAQVVPIGGEVKQYQVLADPARMLATGVSLEQVLAAAAGANRNASGG
                     VYMDRGQEFVIRGIGRVRSAEDIGLTVVALKAGVPVVLSQVSDIVVGPAPKYGDGSVN
                     AEPGVVLAVQKQPGANTLDLTRRIEQELADIQRTLPEGMTIRAELFRQASFIAVAIEN
                     VLEALRDGALLVVVILFLFLGNLRATAISVLAIPLSLVVAIFGMKLLGITINTMTLGG
                     MAIAIGALVDDAIIDVENVFRRLKENHHLPGVERRPALAVIYEASREIRASIVNATLI
                     IIVVFLPLFFLGGVEGRLLRPLGFAYVVAILASLLVAVTVTPVLCSYLLPEAKAVREE
                     RESALVRWLKRRYARTLEVVLAHPGRVVSAAVLVLVAAVVSLPLLGSSFLPEFNEGAL
                     TVSVVTVPGTSLEEANAIGRRVEQILLANPAVVNTDRRQGRAELDEHAQGVNAAEIDV
                     TLRAAVDKETVFEDLRREFSAIPGTNVTIGQPIGHRIDHMLSGTRANIAVKIFGPDLY
                     QLRQVGARVREAMQDVPGVADLQLEQQADVPQLQIRANRRALAQYGMTVGGLADAIGV
                     AFNGEVVSQVLEEGKSYDLVVRLLPALRSNAGRIETVMFDTPTGQKVPLAELAAVTVE
                     RGPNTISRENVQRKIVVQANVAGRDLGSTVADIQRAVADRVTLPIGYHLVYGGQFESQ
                     AEATRVLGALSLLSIVAIFLILFAEFRSGRTATLVMANLPLALIGGVAAVLLTGRVVS
                     IASLVGFVTLFGIATRNGILLVAHYRQLQSEGVGFRETVVRGSLERLSPILMTALTAG
                     LALIPLALGGGEPGNELQTPMAVVILGGLLSATALNMVVLPALYWQVERPR"
     gene            complement(4213..5721)
                     /locus_tag="VGA78_14580"
     CDS             complement(4213..5721)
                     /locus_tag="VGA78_14580"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9895154.1"
                     /translation="MQPAYPGIPLTFAIGLAGLILACGQNDTVPESAASEPAGGAITL
                     WTDSTELFMEHPALIVDRPDKFAVHLTDLTDFAPLRSGRITLRFDPRGGGEPLVVSQN
                     APRAPGIYGPSPEFTRPGVYDLTIVVESPQARDTLRIPALRVYATVDEAPRETGEAPG
                     GIGFLKEQQWKTAGFATAFATTDSVTETIQTTAAIVPAAGRMARVAAPVAGLIEASGV
                     EDAPVPGQRVAQGQSLAVLSPALGEAGSTLSRAWAELREAEDEHARAKRLVEAEAAPA
                     RRLHEAQIRLTAARDALTGVQGSGSARPDGRLLLRAPIAGTIATRTLTPGSRVEAGTE
                     LFTIVDASVVWLQVNMPAAEALEVSRRSGASFRVAGGERVYSTSRMVSAGSIVDSISR
                     TVPMLYQIENRDGSLKIGMYAQVAVGTGRRKVGVVIPGSAVLSEDGRSVAYVQVEGER
                     FEKRELVLGAVGGHATLVLSGIRAGERVVTGAAYQVRLASLSTAVPAQGHEH"
     gene            complement(5729..6991)
                     /locus_tag="VGA78_14585"
     CDS             complement(5729..6991)
                     /locus_tag="VGA78_14585"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9895155.1"
                     /translation="MRISLYAAGALWLAAGPVAAQSSARPAVPLTLAQARAMARQSSP
                     DVTAARAAVAAAVGREEQAGGFSNPALVYGREQTSGENETTSQDVVSLNQPLDIFGQR
                     SARRQAAARQRNAAEARLAGALARVDYDVTRSYAAASATRRRAELAQAVADAFIGAER
                     VARTRLAEGDISGYEHRRLRLEAARYASLRLEAAVARDSALGILASLIGWTDSLAAGD
                     RLTLSDTLPPAALAYPIDSLVARALAGRAELRAAELEIGVGEAEARLAGAERIPIPVI
                     SGGYKSERLTTGARLGGFIAGLSLALPLWDRRGGAVAAARAETARRTAEAESLRQRSI
                     REVRTAYQSHQALASELALLQSHLGDEAATARRAAETAYAEGEISLLEWLDSVRAYQE
                     AESLYVTLWSEYVTRRAALERLTGLTLF"
     gene            complement(7124..7510)
                     /locus_tag="VGA78_14590"
     CDS             complement(7124..7510)
                     /locus_tag="VGA78_14590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895156.1"
                     /translation="MSRLRRSRFAGLLLALIMGLAVIAPEASHTQAHRHGAEAEPHGV
                     GPAPAGQAQLEPALDVDGDHPHVDLVATPPGKPLVFLAAARSVVICLTTQPETRRCCA
                     IIVSDDAARPGWEHGPPPPSRAPPSC"
     gene            complement(7565..8794)
                     /locus_tag="VGA78_14595"
     CDS             complement(7565..8794)
                     /locus_tag="VGA78_14595"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895157.1"
                     /translation="MRVVRNLRLSLRAFSTHRVRTGLAVAGTAVGVAGVLVSTAIGEG
                     ARGAVVRRIESLGRNMLVVSAEKVDSRGGRKVQGEGWTRTLRTGDVSALLRGSPAIIR
                     AAPAQDRGMTAKFGPIQAPATVVGTTPDWQLIRQFPLTQGRFFTADENDRRARVAVLG
                     SAIRTSLFGDTSGAVGRTIRIGRVPFQVVGVLASKGLSVDGTATEDDKIFVPLETALR
                     RLFNTEYLKFIYLEAVDPALMADAQSDAASILRVQHGLPDGGEDDFAIQNQRLLLAAE
                     LETKASFRRLIMGLGFLSLLVGGVGILSMMLLSVKERRSEIGLRVSVGARRQDIAVQF
                     VAEALLLAVAGGLLGLWLGLGVAGIVSAVTTWESQISQRTLAVAIGSVLGIGLGFGAY
                     PAWRAAALNPIEALQAE"
     gene            complement(8802..10016)
                     /locus_tag="VGA78_14600"
     CDS             complement(8802..10016)
                     /locus_tag="VGA78_14600"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895158.1"
                     /translation="MRISRVLGNSVRGMSRNRLRTFFMMLGTFVGVCALTVILAIGRE
                     TQAQILRRFDKVFSGSTMFLRAGGGRVRMGAHGPPTTTLTLEDMEVIDGEIDEVALID
                     PMQMAGERDVVSDGVTSRIRIEGHSEAAEAVWNRSVTRGSYFTAGDVAGAARVALVGP
                     TAARELFPDRDAVGKQIRIGAVPFQVIGVLAPMGLDPHGLDKDNEIIIPITTMLRRVR
                     NVDYLTGARLALAEGTDLDAAQGRIRELLRRRHGLVQDQEDDFHIFTPTQVRQMVKSS
                     NRVFTLFLPLVAGLSILVGGLVVANLMLMTVHDRRAEIGLRKAIGARPRDIQLQFLAE
                     SAAVTGLGGLFAVVTGYGILQLLGHAQGTPAGIPWSAVALGLTCAVGMGLVAGVVPAR
                     RAARLEPVQTLR"
     gene            complement(10018..10713)
                     /locus_tag="VGA78_14605"
     CDS             complement(10018..10713)
                     /locus_tag="VGA78_14605"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895159.1"
                     /translation="MIELVDLYRTYRKGTEEIRALDGVSLIIERGEFVAIVGPSGSGK
                     STLMNVIGLLDRPDSGGYRLEGRDVGSLTPDELAQLRNERIGFVFQAFHLLPRTTAVE
                     NVELPLVYSDRQDTRGLGLRALERVGLADRATHLPGELSGGQQQRVAIARALVQEPDL
                     ILADEPTGNLDSKSGTEILEIFRQLNAAGTTVVVITHDAQVSRHAGRTITLGDGRIIS
                     DSRAVVTASAGGR"
     gene            complement(10713..11819)
                     /locus_tag="VGA78_14610"
     CDS             complement(10713..11819)
                     /locus_tag="VGA78_14610"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9895160.1"
                     /translation="MRSGRWIGRVLLLGLGVGAGWLGARRAEAVGSTPATADPWESAL
                     VERRDVGATVLATGVVRPRVGAQVAVGSRASGVVKRLHVTVGDRVVAGQLLAELDRVE
                     FETQVERAEAQRLNAVSEREWAEQDFNRARQLAAGGYATAADLAQAQRSIETSRAKER
                     EAMAALAAARVQLGYTSIRAPISGVVGSVSTQEGETVAASFAAPTFLTIVDLARLEVQ
                     AYVDETDIGRIVAGQRATFTVDTWPDQSFEGRVTAVRPTAELRDNVVNYVTLIEFKNQ
                     PDRLLRPEMTATINVMVEGRTDVLSVPNGALRRDAGGTYVLVKTASAAERRAVVAGFR
                     GSDFTEVTSGLEAGDRILVGKGVECPAATPSEGE"
     gene            complement(11841..12224)
                     /locus_tag="VGA78_14615"
     CDS             complement(11841..12224)
                     /locus_tag="VGA78_14615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895161.1"
                     /translation="MRTRLALLTALLLPLAGTVAPVAGQSHAKTTALDPVGTYDLDFE
                     MHGQVTSSVLIISREKDGRLTGTLEIHEQALSFSEVKLEGKELQLWNSDQLGITLTFK
                     NDDTLAGKWTRPDANGGVQGVRRKR"
     gene            complement(12333..12710)
                     /locus_tag="VGA78_14620"
     CDS             complement(12333..12710)
                     /locus_tag="VGA78_14620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895162.1"
                     /translation="MTRAVLAAVALLILGGAIGVTADRLHHRPHGTAALWAEVQKDPV
                     GVMQRELDLRPEQRARVAAIMEQRQGAIDAVWRDTHVRLRATIDSVVSEIAAVLDPDQ
                     AERFRRLADEIHSGPAGMHRRSH"
     gene            complement(12707..13057)
                     /locus_tag="VGA78_14625"
     CDS             complement(12707..13057)
                     /locus_tag="VGA78_14625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895163.1"
                     /translation="MTEFRDLSRLPVDQSYWDGLEAKITAELGPLVRQVGSRKPGWLS
                     PLAARAWALGGLAVAAAIAALLLVPSRSLDSTGNPAGLLRLPENDPTLVAFVSAPVPP
                     ALAVLVLSPAGGDR"
     gene            complement(13054..13689)
                     /locus_tag="VGA78_14630"
     CDS             complement(13054..13689)
                     /locus_tag="VGA78_14630"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9895164.1"
                     /translation="MYCGEQPRAALLERLVTADENQIGSGLENPSDETLVAATLGGDE
                     QAFAHLVRRYLRKAMAVALEYVGTREDAEDVVQDTFRRVLESLDRFNPGRSFEPWFFT
                     ILRNTARNAAKSRRIRDHDALSAEQESIAPGPFEQTHRGELHHRIGAAIERLPPMQRT
                     CFRLCLVEGFSSAEAASAIGLAESTVRVHVFKARQTLQQLLAGWRDELEEA"
     gene            13768..14040
                     /locus_tag="VGA78_14635"
     CDS             13768..14040
                     /locus_tag="VGA78_14635"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HEX9895165.1"
                     /translation="MPAKRRPPRVRETVSLYEAKTHLSSLVERAAEGEEIVIAKSGKP
                     KAKLVPLEDVRALRRSGQGRGQWRVGPDFDRPLPDDVLDEFGGPPE"
     gene            14037..14408
                     /locus_tag="VGA78_14640"
     CDS             14037..14408
                     /locus_tag="VGA78_14640"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9895166.1"
                     /translation="MRLLLDTHVLIWWDEGQPLDAKADRAIREAEQVYVSAASGWEVA
                     IKTSLGRLHPRRTVSQAVIDSGFEELPVLLSHTERVSTLPWRHRDPFDRLLVSQALTE
                     QLTIITRDRILRKYEVRVILA"
     gene            14473..15540
                     /locus_tag="VGA78_14645"
     CDS             14473..15540
                     /locus_tag="VGA78_14645"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF014752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ERCC4 domain-containing protein"
                     /protein_id="HEX9895167.1"
                     /translation="MTAIWTVERTAHRRFPFRIAVEQDGRRIIALRAQSSWPGPGQQI
                     FCVRERSFDPDEPLQPVERVPIAHLTRVGRKLAIVLDRATRKRCEFLAINKPAADGST
                     REQIFFRTESGIRAHRSRTRMELLPADHPLVIAIDSGERYPWRFPGATVRRRKLAFGD
                     YALLEGERPVAVVERKTFDNLLADIGALQALHHQLADLASWDSSALVIEAQYGDFLDQ
                     SRLQGRWPAVHLARVLAELAALHPKLPMVFAGNRKLANAWCQQFFVACRGRDLSPQLD
                     LVRETIAGYYPTPRELPFTDRVREVALHRLGASFSMTDLAGRFDGVPENRVKRVVDQL
                     RREGLLVSSGRGPGCRYTPAD"
     gene            complement(15547..15936)
                     /locus_tag="VGA78_14650"
     CDS             complement(15547..15936)
                     /locus_tag="VGA78_14650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895168.1"
                     /translation="MPVTARLSRKFYETFGDEVTNELVEWLNMVDATYRADLRELNEL
                     NFARFDARLEQRVAELDAKLEQRMTRLEAGLEQRFAGLEAGFERLRVEFRAELRAELA
                     AQRAEMIKWSFLFWIGMVVTVFVSRLI"
BASE COUNT         2706 a         5699 c         5194 g         2536 t
ORIGIN      
        1 agcccgaaaa caaccgccgc gacatcgcac gacgtcgcct tcgccgcggc ggcaccctcc
       61 acgttgctca agaggacgat ggtagtgccg tcctcgaagt gcgccagatg actggcaaag
      121 ccattggcgc cgccggtgtg attgaccagg cgacgtccaa acaccgtgac aatctgccac
      181 cccagcccat agtcgcccaa aacaggtgtc gtcatcaggc gataggtgga gtcgtgcacc
      241 aggcgtccag ccgagagggc aacgtcgaag ccaagcagat cgcgcgcagt cgaaaggagt
      301 ccgcccgcgg cataggctga gtggtcgtga tactcgatgt gccgcagctc tccgcccaca
      361 cggacatacc cgcgcgcccg cctgggcatg attcgccaca cgtcgtcata ggctgtcgcc
      421 tgcattcctg ccggctggaa cacctcccgt cgaagcaggg tctcccaggg ggcccggcca
      481 atgatctcga gcgcgtagcc gaggaggaag tagttgaagt tactgtaggc gtaccgttcg
      541 ccgggccgcg aacgaagcga atccccgata tgacggccga tcgccgcatc gatgacgtag
      601 cgggtggaat cgaccgccgc cgccggcagc tcaccaaaca ggtccgggat cccactcgtg
      661 tgagacaaca gatggctgat cgtcaccagg tgccacgcgt cagggcagcg cggcagatag
      721 gaacagatcg aatccgtcag gcgaagggcg ccacgctccg ccaatcgcat gacggtggtt
      781 gccgtgatcg gcttggtgag ggagccgata ccgaatcgaa gctggggagt atttcgaacc
      841 ccgagatcgg catcagcaaa gccatatccc cgctcgaaca cgacgcgacc cccgcgagca
      901 accagcacga cgccggagaa cggcccttcg gggcgttggg cgaaataggc ctccagccgt
      961 acggtaaggt cctgcgactg cgctacggag cgggtcacag gcagcagcaa tcccacgagg
     1021 gcaacaagac gatcgacgcc catcggcctc tccggagaaa cggtcagtaa tacatgggac
     1081 gctaatgagg caagattggt tggttgcacc ggtggtcgcc gacggccgac ctatcgcggc
     1141 cgctcgacct gccagtagag cgccggcagc accaccatgt tgagcgcggt cgccgagagc
     1201 aacccgccca ggattaccac ggccatcggc gtctgcagct cgttccccgg ttcgcctcca
     1261 cccagggcca ggggaatgag ggccaggccg gccgtgagcg cggtcatgag gatcggtgag
     1321 agtcgttcga gcgagccgcg caccaccgtc tcacggaagc cgaccccttc gctctggagc
     1381 tgccggtagt gcgccaccag caggatcccg ttccgggtgg caatcccgaa cagcgtcacg
     1441 aatcccacca gcgacgcgat actcaccacc cgcccggtga gcagcacggc cgccaccccg
     1501 cctatcaggg cgagcggcag attcgccatg accagcgtcg cggttcgccc agaacggaac
     1561 tccgcgaaca ggatcaggaa gatcgctacg atcgacaaca acgacagcgc gcccagcacc
     1621 cgggtagcct ccgcctggct ctcaaactgc cccccataca ccagatgata gccgatgggc
     1681 agggtcaccc ggtcagccac cgcccgctgg atgtccgcca cggtgctccc caggtcccgt
     1741 ccggccacgt tggcctggac gacgatcttc cgttgcacgt tctcgcgaga gatcgtattc
     1801 ggtcctcgct ccacggtgac cgccgccagc tccgccagcg ggaccttctg acctgtcggc
     1861 gtgtcgaaca tcacggtttc gatccgtccg gcgttggacc ggagtgccgg caggaggcgc
     1921 accaccaggt cgtagctctt tccctcctcc agcacctggg acaccacctc accattgaac
     1981 gccaccccga tggcgtcggc cagtccgcct accgtcatgc cgtattgcgc caacgccctc
     2041 cgattggccc ggatctgaag ctggggtacg tctgcctgct gctccaattg caggtccgcc
     2101 accccgggaa catcctgcat cgcctcccgc acccgggccc cgacctggcg cagttggtac
     2161 aggtcggggc cgaagatctt gaccgcgata ttggcacggg tccccgacag catgtggtcg
     2221 atgcgatggc cgatgggctg gccgatggtc acgttggtgc ccgggatggc ggagaactct
     2281 cgccggaggt cttcgaagac cgtttccttg tcgaccgccg cgcgcagcgt gacatcgatc
     2341 tccgccgcgt tcaccccctg ggcgtgttcg tccagctcgg cccggccctg ccgccgatcg
     2401 gtattcacta ccgccggatt cgcgagcagg atctgctcca cccggcgtcc gatggcgttg
     2461 gcctcctcca gcgaggtacc cggcaccgtg acgaccgaga cggtcagggc cccttcgttg
     2521 aactcgggca gaaacgatga ccccagcagc ggcaggctga cgaccgcagc gaccaggacc
     2581 aggaccgcgg cggacaccac ccggccggga tgggccagga ccacctcgag ggtgcgggca
     2641 tagcgccgct tgagccagcg gaccagcgcg ctctcccgtt cctcccgcac cgctttcgcc
     2701 tccggcagga gataggagca gagcaccggc gtcaccgtca ccgccaccag gagggacgcc
     2761 aggatcgcca ccacgtaggc gaagccgagc gggcggagca gccggccctc cacgcccccc
     2821 aggaagaaga gcgggagaaa caccacgatg atgatcaagg tggcgttgac gatcgaagcc
     2881 cggatctccc gcgatgcctc gtagatcacc gccagcgccg gacgacgctc cacacccggg
     2941 agatgatggt tctccttgag ccggcggaac acattctcca cgtcgatgat cgcgtcgtcc
     3001 accagcgccc cgatggcgat ggccattccg cccagggtca tggtattgat ggtgataccg
     3061 agcagcttca taccgaagat cgccaccacg agggagagcg gaatcgcgag caccgaaatc
     3121 gccgtggctc ggaggtttcc cagaaacaga aacaggatca ccaccaccag cagcgcgcca
     3181 tcccgaagcg cctccagcac gttctcgatg gctaccgcga tgaagctggc ctggcggaac
     3241 agctccgcgc ggatcgtcat cccctcaggc agcgtccgct ggatgtcggc cagctcctgc
     3301 tcgatccgcc gggtgaggtc gagggtgttg gcccccggct gtttctgcac cgccaggacc
     3361 accccgggct ccgcgttgac cgatccatcg ccgtacttgg gcgccggccc caccacgata
     3421 tcgctgacct ggctcaacac caccgggaca ccggccttca gggccacgac ggtgagtcca
     3481 atgtcctccg cgctgcgcac ccggccaatg ccgcgtatca cgaattcctg tccccggtcc
     3541 atgtacacgc cgccagaggc attccggttg gccccggcgg cggcagcgag cacctgttcg
     3601 aggctgaccc ccgtggcgag catccgcgcc gggtccgcca ggacctggta ctgcttcact
     3661 tcgccaccaa tcgggaccac ctgcgccact ccgtggacgg cgagcaggcg gcgccggatg
     3721 gtccagtcgg ccacggtacg caggtcctgg ggagaggaag gaccggtcag cccgatcatc
     3781 atgatctcgc ccatcaccga ggatatcggc gccaataccg gcgccgcgat tccgtccggg
     3841 aaccccgccg ccaccgtctg cagcttctcg ctcacgatct gtcgggcacg gaagatgtcc
     3901 acgccccagt cgaactcgac ccacaccacg gagatgccct gggcggtgga cgacctgacc
     3961 cgccgcactc cggtcgcccc gttgacgccg gcctcgatgg ggaagctcac cagagcttcg
     4021 gcctcttccg gcgccatgcc gtgcgcctca gtgagcaccg tgacggtcgg tgccgtgaga
     4081 tcgggaaaca catccaccgg catgcgggcc gcggtccagc cgcctgcgac caggagcagc
     4141 gccgccgccg ccagcaccag agtccggttt ctgagcgacc aggcgatcag atgattgagc
     4201 atcgcttctc ccttagtgtt cgtgcccctg cgccggtacg gcagtggaga gggaggcgag
     4261 ccggacctgg tacgcggccc cggtgaccac tcgctcgccg gcccggatcc ccgacagcac
     4321 cagcgtcgcg tggccaccca ccgcacccaa caccagctcc cgtttctcga accgctcgcc
     4381 ctcgacctgg acgtatgcga ccgagcggcc gtcttccgac agcacggccg acccggggat
     4441 gaccaccccc accttccgtc ggccggttcc gaccgctacc tgggcgtaca tcccgatctt
     4501 gaggctgccg tcgcgattct cgatctggta gagcatcggt accgtgcgag aaatcgagtc
     4561 cactatcgag ccggccgaca ccattcggct ggtgctgtag acccgttcgc cgcccgctac
     4621 ccggaacgag gctccggacc gccggctgac ctcgagtgct tcggcggcgg gcatattcac
     4681 ctgcagccag acgaccgagg catcgacgat ggtgaacagc tccgtcccgg cctcgacccg
     4741 gctgcccggc gtcagcgtgc gggtcgcgat cgtccccgca atcggcgccc ggagcagcaa
     4801 ccggccatcc ggtcgcgccg acccgctccc ctgtactccg gtgagcgcgt cgcgcgcagc
     4861 cgtgaggcga atttgtgctt catgcagccg gcgcgccggc gccgcttcgg cctccaccag
     4921 ccgtttggca cgcgcgtgct cgtcctcggc ctcacgaagc tcggcccacg cccgtgacag
     4981 cgtgctgccg gcctcgccta acgccgggct cagcacggca agcgactgcc cttgtgccac
     5041 tcgctgcccc ggcaccggtg catcctctac cccgcttgcc tcgatcagcc ccgccaccgg
     5101 agcggccacc cgcgccatcc gccccgccgc ggggacgatc gctgcggtgg tctggatcgt
     5161 ctcggtgacg ctgtcggtcg tcgcgaaggc ggtcgcgaag ccggccgtct tccactgctg
     5221 ttccttgaga aacccgatcc cgcccggggc ttccccggtt tcccggggtg cctcgtccac
     5281 ggtggcgtat acccgcaacg ccgggatgcg aagggtatcg cgcgcctggg ggctctccac
     5341 cacgatggtg agatcgtaga cgccgggccg ggtgaactca ggcgacgggc cgtagatccc
     5401 gggcgctctc ggcgcgttct ggctgacgac caggggctcg ccaccccctc tcggatcgaa
     5461 ccgcagcgtg atccggccgg aacgcagggg cgcgaagtcg gtgagatcgg tgagatgcac
     5521 ggcgaacttg tccggccggt ccacgatcag ggccgggtgc tccatgaaca gttcggtcga
     5581 gtcggtccac aaagtgatgg ctccaccggc cggttcggat gctgcggact ccggtaccgt
     5641 gtcgttttgg ccgcaggcga ggatcagccc cgcaaggccg atcgcgaaag tcagcggaat
     5701 gcctggatac gcgggttgca tggaatcctc agaagagcgt gaggccggtg agacgctcga
     5761 gcgcggcgcg acgggtgacg tactccgacc ataacgtgac ataaagggac tcggcttcct
     5821 ggtaggcgcg caccgagtcc agccattcga gcagcgagat ttctccctcc gcgtaggcgg
     5881 tctcggccgc ccggcgcgcg gtcgcggcct cgtcgccgag gtgcgactgg agcagtgcca
     5941 gttcgctcgc cagcgcctgg tgcgactggt acgcggtccg gacctcccgg attgaccgtt
     6001 ggcgaaggct ctctgcctcc gctgttcggc gggcggtctc ggcccgggcg gccgcgaccg
     6061 cgccgccccg ccggtcccag agcggcagcg ccaggctcag accagcgatg aaaccgccga
     6121 gcctggcccc ggttgttagg cgctcgctct tgtagccccc gctgatcacc ggaatcggga
     6181 tccgctcggc cccagccaac cgcgcctcgg cttctcccac gccgatctcg agctccgcgg
     6241 cccgcagctc cgcccggccg gccagagcgc gggctaccag cgagtcgatc gggtaggcca
     6301 gggctgccgg cggcagagtg tcggacaggg tcaaccggtc gcccgcggcc aatgagtcgg
     6361 tccacccgat gagggaggcc agaatcccca gcgcgctgtc ccgcgccacc gcggcctcga
     6421 gcctgaggga cgcgtaacga gctgcctcga gccgcagccg gcggtgctca taccccgaaa
     6481 tgtccccttc ggccagccgg gtccgggcca cccgctcagc cccgatgaag gcatccgcaa
     6541 ccgcctgtgc cagctctgcc cgccggcgtg tcgcagacgc ggcggcgtag ctccgggtca
     6601 cgtcgtagtc cactctggca agggcaccgg cgagacgcgc ttcggcggca ttgcgttgcc
     6661 gggcggctgc ctggcgtcgg gcgcttcgct gtccgaagat gtccagcggt tgattcaggc
     6721 tcaccacgtc ctgcgaggta gtctcgtttt caccggaggt ctgttcccgc ccgtagacca
     6781 gcgccggatt ggagaacccg cccgcctgct cctcgcgtcc cacagccgcc gcgacggctg
     6841 cccgggctgc ggtcacgtcc gggctgctct ggcgggccat cgcccgggct tgggccagcg
     6901 taagtggaac cgccggccgg gcggaggatt gggcggcgac cggacccgcg gccagccaga
     6961 gtgcgcccgc ggcgtacagg gagatgcgca tgcgtagccc cattgcgtcg aggtgtccgc
     7021 gccggtgtgg tgcccggcgt taaccacggg cccggtcgcg acgggcgcgg ccgggccgga
     7081 caacacctac cgtcagcccc tggtcagcaa gccggcggcg ttgtcagcag ctgggcggtg
     7141 cgcgggatgg aggtgggggg ccgtgctccc agccgggtcg cgccgcatcg tcggagacga
     7201 tgatggcaca gcagcgcctg gtttcgggct gggttgtgag gcagatgact accgaccggg
     7261 cggcggcaag aaacaccagc ggcttgcctg gcggagtagc gaccagatcg acatggggat
     7321 gatccccatc gacatccaga gccggctcca gctgggcctg cccggccggg gcaggtccga
     7381 cgccatgagg ctcggcttct gccccgtgcc gatgcgcctg ggtgtggctc gcctcgggcg
     7441 caatgaccgc caggcccatg atcaaggcga ggaggagacc ggcgaatcgt gaacgacgca
     7501 ggcgactcat cgctctcaag ataacgaagg tggctgcgag accgcagaag agccctcgga
     7561 tccattactc cgcctgaagc gcctcgatcg gattgagcgc cgcggcacgc caagctgggt
     7621 atgccccgaa gccgagtcca ataccgagca ccgacccgat ggccacggcc agcgttcgct
     7681 gggagatctg agactcccag gtggtcactg cagagacgat ccccgcgact cccaggccga
     7741 gccagagtcc caacagcccg ccggccaccg ccagcagcag ggcctcggcc acgaactgca
     7801 ccgcgatgtc ctgccggcgg gccccgaccg aaaccctgag cccgatctcg gaccggcgct
     7861 ctttgaccga cagcaacatc atggagagaa tccccacccc accaaccagg agggacagga
     7921 agcccagacc catgatcagt cgccggaagg acgccttggt ttcgagctcc gcggccagaa
     7981 gcaggcgctg gttctggatg gcgaaatcat cctcgccacc gtcaggcaag ccgtgctgca
     8041 cccggagaat ggaggccgcg tccgactggg cgtcggccat cagcgccggg tccaccgctt
     8101 cgaggtagat gaatttcagg tattcggtgt tgaacaggcg tcgaagcgcg gtctcgagcg
     8161 gtacgaagat cttatcgtct tcggtggcgg tgccgtcgac gctcaggccc ttgctggcca
     8221 gcacgcccac aacctggaag ggcactcgtc caatccggat ggtgcgaccc actgcgcccg
     8281 atgtgtcgcc gaagagactg gtccggatgg ccgaccccag caccgcgacc ctggcgcgcc
     8341 ggtcgttctc gtcggccgtg aaaaagcggc cttgggtgag cgggaactgc cggatgagct
     8401 gccaatcggg ggtggtgccc acgaccgttg ccggggcctg gatcgggccg aatttggcgg
     8461 tcatgccccg gtcctgggcg ggcgccgccc gaatgatggc aggggatcct cgcaggaggg
     8521 cggagacatc tccggtccgg agcgtgcggg tccagccttc accctggact tttcgtccgc
     8581 cccgtgagtc gaccttctcc gccgagacca ccagcatgtt gcgaccgagg ctttcgatcc
     8641 ggcgcaccac ggcgccccgc gcgccttcac cgatcgcggt cgacaccagc acgccggcga
     8701 cgccgacggc cgttccggct accgccaggc cggtacgaac ccggtgggtg gaaaaggcgc
     8761 ggagcgagag gcggagattt cggacgaccc gcatcgcgcg atcatcggag cgtctgaacc
     8821 ggctcgagcc gggcagctcg tcttgccgga acgacacccg ctaccagacc cattccgacc
     8881 gcacaggtca gccccagtgc taccgcgctc caggggatcc ccgccggagt gccctgcgcg
     8941 tgaccaagca gctgcaggat gccgtatccg gtgacgacgg cgaagaggcc gccgagtccg
     9001 gtgaccgccg ccgactcggc caggaactgc aactggatgt cgcggggccg ggcgccgatc
     9061 gccttccgca ggccgatctc ggctcgccgg tcgtgcaccg tcatgagcat caggttggcc
     9121 accaccagtc cgcccacgag aatcgagagc ccggcgacca gcggcaggaa cagggtgaag
     9181 acccgattgg aggacttgac catctggcgc acttgggtcg gggtgaatat gtggaagtcg
     9241 tcttcctggt cctgcaccag gccatgccgg cggcggagca gctcgcggat cctcccttgt
     9301 gcagcgtcca ggtcagtccc ctccgccagc gccagcctcg ctccggtgag atagtccacg
     9361 ttgcgaaccc ggcgcagcat ggtcgtaatg gggatgatga tctcgttgtc cttgtcgagc
     9421 ccgtgcggat ccagccccat cggcgccagc acgccgatca cctggaaggg aaccgccccg
     9481 atccggatct gtttccccac cgcgtcccgg tccggaaaca gctcccgcgc cgccgtcggt
     9541 cccaccaggg caacccgggc cgcaccggcg acgtcacccg ccgtgaaata cgaaccccgg
     9601 gtgaccgagc ggttccacac cgcctcggcg gcctctgagt gcccttcgat ccggatccgg
     9661 ctggtgaccc cgtcagagac gacatcccgc tctcctgcca tctgcatcgg atcgatcagg
     9721 gccacctcgt cgatctcgcc gtcgatgacc tccatgtcct ccagcgtcag ggtggtggtt
     9781 ggcggcccgt gcgcacccat ccggacccgg ccgccaccgg cccgcaggaa catggtggag
     9841 ccgctgaaca ccttgtcgaa gcgccggaga atctgggcct gggtttcccg gccgatcgcc
     9901 aggatcaccg tgagggcgca gaccccgacg aatgtgccca gcatcatgaa gaaggtgcga
     9961 aggcgattcc ggctcatgcc tcggacgctg ttgcctaaca ctcgcgatat gcgcatgcta
    10021 tcgccctcca gccgacgcgg tcaccaccgc gcgggagtcc gagatgattc gcccatcgcc
    10081 gagggtgatg gtgcgcccgg catgacgcga gacctgggca tcgtgggtga tgacgacgac
    10141 cgtcgtgccg gcggcgttga gctgccggaa gatctccagg atctcggtcc ccgacttgga
    10201 gtcaaggttg ccggtgggct cgtcggccag gatcagatcc ggctcctgga ccagcgcccg
    10261 ggcaatggcc acccgctgct gctggccccc cgacagctcg cccggcagat gggtggcccg
    10321 gtcggccagt cccacccgct ccagtgccct gagacccagc ccgcgagtgt cctgccggtc
    10381 ggaatagacc agcgggagct ccacattctc cactgccgtg gttcggggga gcagatgaaa
    10441 cgcctggaat acgaacccga tgcgttcgtt gcgaagctgg gccagctcat ccggagtcag
    10501 actcccgacg tcgcgtcctt ccagccggta gccgccggag tcgggccgat ccagcaggcc
    10561 gatcacgttc atcagggtcg atttccccga gccggacggc cccacgatgg cgacgaactc
    10621 cccccgctcg atgatcaggg ataccccatc aagggcccgg atctcctcgg taccctttcg
    10681 gtaggtacgg tacaggtcca ccagctcgat catcattccc cctcagaagg tgtcgctgcc
    10741 gggcactcga ctcccttgcc caccaggata cgatcgccgg cctcgagccc cgacgtcact
    10801 tcggtgaaat ccgaaccgcg aaaaccggcg acgacggccc gccgctcggc ggcgctggcc
    10861 gtcttgacca gaacgtaggt cccaccggcg tcgcgccgaa gggcgccgtt cggcaccgac
    10921 agcacgtcgg tccggccctc caccatcacg ttgatggtgg cggtcatctc ggggcggagc
    10981 agccggtcgg gctggttctt gaactcgatc agcgtgacgt agttcaccac gttgtcgcgc
    11041 agctcggcgg tggggcgtac cgcggtgacc cgtccctcga aggactggtc gggccaggtg
    11101 tccacggtaa aggtggcccg ctgccccgcc acgatccggc cgatgtcggt ctcgtccaca
    11161 tacgcctgca cctcgagccg ggccagatcg acgatggtga ggaaggtcgg cgccgcgaag
    11221 ctggccgcga ccgtctctcc ttcctgggtc gagaccgagc ctaccactcc actgatcggg
    11281 gcgcggatgc tggtgtatcc cagctgcacc cgggccgccg ccagcgccgc catggcttcc
    11341 cgttccttcg cccgcgaggt ctcgatcgac cgctgcgcct gcgccagatc cgccgcggtg
    11401 gcgtatccgc cggccgccaa ttgacgggct cggttgaaat cctgttccgc ccactcccgt
    11461 tcggagaccg cgttcagccg ttgcgcctcg gcccgctcga cctgggtttc gaactccacc
    11521 cgatccagct cggccaggag ctgcccggcg acgactcggt cacccaccgt gacgtggagc
    11581 cgcttgacca cgcccgaggc gcgcgaaccc accgccacct gggccccgac gcggggccgc
    11641 accacgccgg tggccagcac ggtggcgccg acgtcgcgcc gttccaccag ggcgctttcc
    11701 catgggtccg cggtcgcggg ggtggatccc acggcttccg cccgccgcgc gcccagccac
    11761 ccggcgccga cgcccaagcc gagcaaaagg acccgcccga tccatcgtcc ggaccgcatg
    11821 agatgctcca gtaatccggc ttagcgcttc cgccgcacgc cctggacgcc gccattggcg
    11881 tcgggcctgg tccacttccc cgcgagagtg tcgtcgttct tgaaggtcag cgtgatgccc
    11941 agctggtcac tgttccacag ctggagctcc tttccctcca gtttcacctc gctgaagctg
    12001 agggcctgtt catggatctc gagcgtgccg gttagtcggc catccttctc ccggctgatg
    12061 atcaggacac tgctggtgac ctgtccgtgc atctcgaaat cgaggtcata ggtgccgacc
    12121 gggtcgaggg cggtcgtttt cgcatgagac tggcctgcga ccggcgcaac ggttccggca
    12181 aggggaagca gcagagcggt caggagagcg agtcgggttc tcatggggcc acctttcgag
    12241 gagtcagagc ctggatgctc tctgctgtac cacgaagggg cccggagtgt ttagcgcagc
    12301 gaaggatctc ttctaagtgc cccgctgggc cgctagtgag accggcgatg catccccgcc
    12361 ggcccgctgt gaatctcgtc ggcgagcctc ctgaaccgct cggcctggtc gggatcgagc
    12421 accgcggcga tctcggagac cacgctatcg atcgtggccc ggagccggac gtgggtatcg
    12481 cgccagaccg cgtcgatagc cccctgacgc tgctccatga tcgcggcgac ccgcgcgcgt
    12541 tgctccggtc gcaggtccag ctcgcgttgc atcacgccca ccgggtcctt ctggacctcc
    12601 gcccacaggg cggcggttcc atgcgggcgg tgatgcagcc gatcggcggt caccccgatc
    12661 gcgccgccca ggatcagcag agccacggcg gccagaacgg cccgggtcat cgatctcctc
    12721 cggctgggga gagcaccagt accgccagag ccggaggaac cggcgctgag acgaaggcga
    12781 ccagagtggg atcgttctcg ggcagacgaa ggagcccggc agggttgccc gtgctatcca
    12841 gcgacctcga cggaaccagg agcagagccg cgatcgcggc cgcgaccgcc agaccgccga
    12901 gggcccaggc ccgggccgcg agcgggctca gccagcccgg ttttctggag ccgacctgtc
    12961 ggaccagcgg gcccagctcg gcggtgatct ttgcctcgag accgtcccag taactctgat
    13021 ccaccggcaa cctcgacaga tcacgaaact cggtcatgct tcctccagct cgtcccgcca
    13081 tcctgccagg agctgctgca gcgtctggcg cgccttgaac acatgcaccc ggaccgtgct
    13141 ttcggccagt ccgatggcgc tggcggcttc ggcgctggag aacccctcga ccagacagag
    13201 ccggaagcag gtgcgctgca tcggaggcag ccgctcgatc gccgcaccga tccggtggtg
    13261 cagctcgccc cggtgggtct gctcgaacgg ccccggcgca atggactcct gctccgccga
    13321 cagcgcgtcg tggtcccgga tccgccggct cttggcggcg ttccgggcgg tatttcggag
    13381 tatggtgaag aaccagggct cgaagctccg gccgggattg aaccggtcga gactctcgag
    13441 cacgcggcgg aaggtgtcct gcaccacgtc ctccgcgtct tcccgggttc ccacgtattc
    13501 gagcgctacc gccatcgcct tcctcagata ccgccggacc agatgggcga atgcctgctc
    13561 gtctccgccc agggtggcgg cgacgagggt ttcgtccgat gggttctcca gtccacttcc
    13621 gatctggttc tcgtccgcgg tcaccaatcg ctcgagcagg gccgcccggg gctgctctcc
    13681 acagtacacc cggccccccc aggccgctta cctgacccac gatgccatcg ctttgaccaa
    13741 tttggtcaaa tcaggtatgt tgccgacatg cctgccaagc gtcgtccgcc acgagtgcgg
    13801 gaaacggtca gcctgtatga ggccaagact catctatcgt cgctggtgga gcgggcggcg
    13861 gaaggggaag agatcgtcat cgccaagtcg gggaagccga aggccaagct ggtcccgctc
    13921 gaggatgtcc gggcgctgcg gcgatcgggt cagggccgag gccagtggcg ggtgggaccg
    13981 gacttcgatc ggccgctccc ggacgacgtg ctggatgagt tcgggggacc cccggagtga
    14041 ggctcctgct cgacacccac gtgctgatct ggtgggacga aggtcagccg ctggacgcca
    14101 aagccgaccg ggccattcgt gaagccgagc aggtatacgt aagcgcggct tcggggtggg
    14161 aggtggccat caagacctcg ctagggcggc ttcatcccag gcgaacggtg agccaggcgg
    14221 tgatcgactc cggtttcgag gagctgccgg tattgctcag ccacaccgag cgggtgagca
    14281 ccttgccctg gcgtcaccgc gatccgttcg accgactcct ggtgtcgcaa gcgctcacgg
    14341 aacagctcac gatcatcact cgggatcgaa tactccggaa gtatgaagtt cgagtcatcc
    14401 tcgcgtaggg gtctcgcggc gagcctgccc acccgttggc attggggtcg aatcgccgag
    14461 taccttcatc ccatgactgc catctggacc gtcgaacgca cggcgcaccg gcggttcccc
    14521 ttccgcatcg ccgtcgaaca ggacgggcgc cggatcatcg cgctccgggc ccagtcatcc
    14581 tggccggggc cgggacagca gatcttctgc gtccgggagc ggtccttcga ccccgacgag
    14641 ccgctccagc cggtggaacg ggttcccatc gcccatctca cccgagtcgg ccggaagctc
    14701 gcgatcgtcc tcgaccgcgc cacccgcaag cgctgcgagt tcctcgcgat caacaagccg
    14761 gcggcggacg gttcgactcg ggaacagatc ttcttccgca ccgagtcggg catcagggcc
    14821 caccgctccc gcacccggat ggagctgctg ccggccgacc atcccctggt tatcgccatc
    14881 gacagcggcg agcgctatcc ctggcgcttc ccgggcgcca cggtccgccg ccgcaagctg
    14941 gcgttcggcg attacgcctt gctcgaggga gagcggccgg tcgcagtagt ggagcggaag
    15001 accttcgaca acctgctggc cgacatcggg gcgcttcagg ccctgcacca tcaactggcc
    15061 gacctcgcca gctgggactc ctcagcactg gtcatcgagg cccaatacgg cgacttcctc
    15121 gaccaatccc ggctgcaggg ccgctggccc gccgtccacc tggcccgagt gctcgccgaa
    15181 ctggcggcgc tccatcccaa gttgccgatg gtcttcgcgg gcaaccggaa attggccaac
    15241 gcctggtgtc agcagttctt cgtcgcctgt cgcggccggg acctcagtcc ccagctggac
    15301 ctggtccgcg agaccatcgc ggggtactac cccacacctc gcgagctccc cttcacggat
    15361 cgggtacggg aggtggcgct gcaccggctg ggagcctctt tctcgatgac agacctggcg
    15421 gggcggttcg acggtgtgcc cgagaaccgg gtgaagcggg tggtggacca gctgcggcgg
    15481 gaaggtctgc tcgtcagcag cggccgaggc ccagggtgcc ggtacacgcc cgccgattga
    15541 tgtgggtcag atcaggcggg agacgaaaac cgtaaccacc atgccgatcc agaacagaaa
    15601 tgaccacttg atcatttccg cgcgctgggc ggcgagttca gcgcggagtt cagcgcggaa
    15661 ctccacccgc agacgctcga agccggcttc aagacccgca aaacgctgct cgagcccggc
    15721 ctcgagccga gtcattcgtt gttccaactt cgcgtcgagt tcggcgactc gctgctccag
    15781 cctggcgtcg aagcgggcga aattcagctc attcagttcg cgcaggtcag cccggtacgt
    15841 cgcgtcaacc atgttaagcc attccaccag ctcattggtg acttcatcgc cgaatgtctc
    15901 atagaacttc cgcgacagcc ttgcggtgac cggcatccta gcaatccagg tagcgaccgg
    15961 tcccactata acgtacgctc ggcaaagagt gacagtcaaa tcagcgttgc tgctgatgct
    16021 ttcaagggta agttagtgcc tggaagtctg cttccgatct ctccccactc ctcccccgcg
    16081 aaattacccg gccagcggga gccaagactg gtcgacccgt gctcctgatc cggcc
//
LOCUS       DASWKS010000515         7539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2873618, whole genome shotgun sequence.
ACCESSION   DASWKS010000515 DASWKS010000000
VERSION     DASWKS010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7539
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2873618"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VGA78_14655"
     CDS             <1..259
                     /locus_tag="VGA78_14655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895169.1"
                     /translation="YVGRYHSDELDVDYQLETRAGRLTLRRAWEPASVLLPSYRDGFA
                     TSGRTVRFMRDSAGRVTGLRVFAGRALDVRFTRVPDSENGK"
     gene            256..783
                     /locus_tag="VGA78_14660"
     CDS             256..783
                     /locus_tag="VGA78_14660"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9895170.1"
                     /translation="MTTTTLTRPSETEYAPVYARYVARIPEGDIVSILDEQMHASAEL
                     LDGLSESQGDYRYAPGKWSIKEVVSHVADAERVFAYRALWFSRGDENELPGFDEQGWV
                     PNSGAASRALRDVADELRAVRLATIAFARSVSEEQSLRSGVASGYRVTVRGLLYIIAG
                     HEAHHVAILRERYLK"
     gene            complement(851..1903)
                     /locus_tag="VGA78_14665"
     CDS             complement(851..1903)
                     /locus_tag="VGA78_14665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895171.1"
                     /translation="MFPSTGQVLLLLATFVSTAGAQEGDSKEPKGPKPATPLFASHTP
                     LAVRVTADFKTIFKDRDTTEQKWFPGSLAWSAGADSGRMPVELTTRGHFRLKTGTCSF
                     APLRIRFPKEARAGTLFDKQGSIKLAVHCRSGNKRYEQIVHQEYLVYRAFNALTDSSF
                     RVRLAQASYVDSVAGTTLEAPSFFIEDADDLGGRMGMKDFDQVGATFADVDSAQAALM
                     SVFFYLVGNTDWSLPYLHNVRVFSQMGNYFPIPYDFDWSGVVDAPYARPDYRLGTKSV
                     RERVWRGPCYPVETLERALKRITSAKDTVYSIYRNHPGLDPKLLKDALEYYDEFFKLA
                     ADPKAWNRELRTNCNR"
     gene            2027..3325
                     /locus_tag="VGA78_14670"
     CDS             2027..3325
                     /locus_tag="VGA78_14670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895172.1"
                     /translation="MPDPLTPIAESYVRLVLAVGVHDPDYVDAYYGPPLWKAEADSVK
                     LGLGEIRARAARLLDSLNAVALPDTAELVRLRQRYLTLQLQALAARLDMLEGQRLGFD
                     QESRALYAAVAPTHDESHFQAVLARLDGLLPGRGPVPARYEAFRRSYVIPPERVDTVF
                     KTAIASCRERTLRHISLPAGEQFTLEYVKDKPWSGYNWYQGSYRSLIQVNTDLPIYID
                     RALDLACHEGYPGHHVYNVMLEQALVRDRGWPEYQVYPLFSPQSLIAEGTANFGIDIA
                     FPGTERLTFERDVLYPLAGLDPASAATYAEVQAVVEDLSYAGNEAARRYLEGRIDAAA
                     AADWLVRFALMSPDRAAQRVRFFDRYRSYVINYNVGRDLVARYVERESGAGATPEARW
                     RVFAALLASPRLPPDLEARRTVNGEQGTGNGEQGTVNRER"
     gene            3352..6564
                     /locus_tag="VGA78_14675"
     CDS             3352..6564
                     /locus_tag="VGA78_14675"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895173.1"
                     /translation="MSTSNQFSTGRFAMAYGWFRLLTVPCLLFTVHCSLFAVGSAQAP
                     AWKVDSARAPEKLLEFTATQGTWISVDVSPDGRSIAFDLLGHIYEMPYSGGEARALTR
                     GRSWNHLPRYSPDGGRMLFTSDRSGKEAVWLLHRGPDSLEQVTKLDDRTYQASWTADG
                     RGFYAVTMDLGAKFSASKFDFHGSRLQLTSPVLFSPPAQLAEDSAGQRVFFAQPAGPV
                     YTTGFQLKAYDLKTGEVRVFRSRRGGAASPALSRDGKWLAYVHRDDRQSELVLHELAT
                     GRERVLLQNLDRDRQESGAGTTYGAYPTLAWHPAGRELVVFYGGTLHAVDVGSGATRD
                     ISFRAPVRRELAQTIRFPVPVPAAGKTTSRSHRFGLRTERGVVYEALGDLWLRDGGST
                     TNLTRSPAMETSPAYDPATRTLYYAAWSDDSLGAVWSRPIDGGAAPTRLTRVPAQYGS
                     LTLSPDGKTLALVRGTDDLLRGGTLEGQGRFELVVIGPDRAERKVTEIQWGEGQYANF
                     ATKHPPGVTFSPSGSELYFSEFANDTLQLKRIRLDGLDEQLLYRFPHGVRAVVSPDLR
                     WVAFREYTRTFVTPFDFAGKPVGISAFDRQGVSFRVDSLDGDYFGWTRGGQGLHWTRG
                     TGFFEKPVDDIVAKRGAARSTNLAVEFDVAVPAGTIALTNARVLTMDAGRRVLERATI
                     VVRGNRIEAVGADIAPPAGARVFDLNGKTVMPGMIDAHAHYNPDISTLHVVEQQHQGL
                     LSNLAHGVTTMYEVYGNDHKDYLVSDLQRAGVAWGPRLLSVGHPIYGQRFFRPKLYRP
                     IVTQADADEIVRANKAHGATALKDYAQFNRMTRQALYTAARREGLNVVAETAVDPQMN
                     WTMLIDGVSGLEHTVGLTPLYDDVLRLWGATGAGNTPTLIVVYNGPAGEQLFHQAERV
                     WENPRLLHFFRKDDLLGFRRPTHYFDDDVYATEMAADLKKLHRAGVSLQVSGHGQMHG
                     LDKHWELELMTRGGFTPAEVLGFATIQSARYLGLDGQLGSIEAGKLADLVVFGADPLA
                     DIRNTRSVEWVVQNGVVYSGADAARIWPNPAPAPKLYNLR"
     gene            6613..>7539
                     /locus_tag="VGA78_14680"
     CDS             6613..>7539
                     /locus_tag="VGA78_14680"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895174.1"
                     /translation="MRRLPFRFVSLTLGCVLLAGPALSAQTSTRGVTHGRRPTGRLVI
                     RNALVIEGNGTPTIGPYDIVVEGNRIVEMVPLDPVALREGRQRRPEAGAEIDGSGKYV
                     LPGLINLHGHIQDERGGAPQPTAYQNKLWLASGITTVREVSSGADPKAYVAFRDQSAA
                     GALEAPRFFICAGYTSHPAPRTPEQVRARVQELKRIGVDCIKIVGLDRDLLAAMLDEA
                     HKLGLPVAHHAGVEETNAWDDIRFGTASIEHWYGVPDAAILDRVQNFPAGYNYSNEVD
                     RFRYAGRLWREADPARLSMVLDSMVARGVAWDP"
BASE COUNT         1265 a         2401 c         2558 g         1315 t
ORIGIN      
        1 ttatgtcggt cgctatcaca gcgatgagct ggacgtggac taccagctgg aaaccagagc
       61 cgggcggctc acgctccggc gggcgtggga gcccgcgtcg gtgctgctgc cgagctaccg
      121 ggacggcttc gcgaccagcg ggcggaccgt ccgcttcatg cgcgatagcg ccggccgggt
      181 caccggcctg cgggtcttcg cgggccgagc gctggacgtc cggttcaccc gtgtccccga
      241 ctcggagaat ggaaaatgac gaccacgacc ctgactcgtc ccagcgagac cgaatacgct
      301 ccggtgtatg cccgctacgt cgctcgcatt cccgaaggcg acatcgtgtc cattctcgac
      361 gaacagatgc acgccagcgc ggagctgctg gacgggctga gcgaatccca gggggattac
      421 cgctacgcac caggcaagtg gtccatcaag gaagtggtat cccacgtggc cgatgccgaa
      481 cgggtcttcg cctatcgggc gctgtggttc agccggggcg atgagaacga gctgccgggc
      541 ttcgatgagc aaggctgggt tccgaactcg ggtgccgcat cgcgcgccct gcgggacgtg
      601 gccgatgagc tccgcgcggt acgtctggcc accatcgcct tcgcgcggtc cgtgagcgag
      661 gagcagtcgc tccggtcagg tgtggcgagc ggttatcggg tgacggtgcg gggcctgctc
      721 tacatcatcg cgggccacga ggcgcaccat gtggccattc tcagggagcg gtatctgaaa
      781 tgacagtgct aagggcttag gactaaggac taagggactc cgcttagtcc ttagtcctta
      841 gtccttagtc ctatctgtta cagttggtgc ggagttcccg gttccaggct ttgggatcgg
      901 ctgcgagttt gaaaaactcg tcataatact cgagggcatc tttgaggagc ttggggtcga
      961 gcccagggtg gttccggtag atcgagtaga cggtatcctt ggcggaggtg atccgtttca
     1021 gggcccgttc caaggtctcg accgggtagc acggtccccg ccagacccgt tcccgaaccg
     1081 acttggtgcc gagccggtag tccgggcggg cgtagggggc atcgaccacg ccggaccagt
     1141 cgaagtcgta cggaatcggg aaatagttgc ccatctgaga gaacactctg acgttgtgca
     1201 gatagggcag agaccagtcg gtgttgccga ccaggtagaa gaacacgctc atgagcgcgg
     1261 cctgggcgct atcgacgtcg gcgaaggtcg cgcccacctg atcgaagtcc ttcatgccca
     1321 tccggccgcc caggtcgtcc gcgtcttcga tgaagaagga cggcgcttcc agggtagtac
     1381 cggcgacgct gtccacgtaa ctggcttggg ccaggcggac ccggaagctg gagtcggtga
     1441 gggcgttgaa ggctcggtac accaggtatt cctgatgcac gatctgctcg taccgcttgt
     1501 tcccgctgcg gcaatgcacg gccagcttga tgctgccctg cttgtcgaac agggtcccgg
     1561 cccgggcctc cttggggaaa cggatcctga gcggtgcgaa gctgcaggtc ccggtcttga
     1621 gccggaaatg ccctcgagtg gtcagctcga ccggcatccg gccgctgtcg gccccggccg
     1681 accaggccag ggaccccgga aaccacttct gctccgtggt atcccggtcc ttgaagatgg
     1741 tcttgaaatc ggccgtcact cggacggcta gaggggtgtg cgacgcgaac agcggcgtcg
     1801 ccggcttggg gcccttgggc tctttggagt caccttcctg cgccccggcc gtcgagacga
     1861 atgtggcgag caggaggaga acctgacctg tgctggggaa cattcttatg ctcaggagat
     1921 atgcttggag aaacgttact gcaatcgccc cgactgggca aacccccggg ttgtgacggc
     1981 cgggctcgtc gtcctcggac tcctcggttg ccggccggcc acccacatgc ccgacccgct
     2041 tactcccatc gccgaatcgt acgtccgcct ggtgctcgca gtgggggtgc acgatcccga
     2101 ctacgtcgac gcctattacg gcccgcccct ttggaaggcc gaagccgact cggtaaagct
     2161 gggtctgggg gagatccggg ccagggccgc ccggctgctg gacagcctga acgcggttgc
     2221 gctacccgat acggcggagc tggttcggct gcgccagcgg tatctgaccc tgcagctgca
     2281 ggccctggcc gcgcggctcg atatgctgga gggacagcga cttggcttcg accaggagtc
     2341 acgcgccctt tatgctgcgg tggcgccgac ccacgatgaa tcccatttcc aggcggttct
     2401 ggcgcggctc gacgggcttc tcccagggcg gggtccagtg ccggcccgat acgaggcctt
     2461 tcgacggagc tacgtgatcc cgcccgagcg ggtcgatacc gtcttcaaga ccgccatcgc
     2521 atcctgccgg gaacggaccc tgcggcatat ctccctgccg gcgggggagc agttcaccct
     2581 cgaatacgtg aaggacaagc cctggagcgg ctacaactgg taccagggct cctatcgcag
     2641 tctgattcag gtcaacaccg acctgcccat ctacattgac cgggcgctcg atctcgcctg
     2701 ccatgagggc tatcccggcc atcatgtgta caacgtgatg ctggagcagg ccctggtgcg
     2761 ggaccggggc tggcccgagt atcaggtgta tcctcttttc agtccccagt cgctcatcgc
     2821 ggaaggcacg gcgaatttcg ggatcgacat cgcctttccg ggtaccgaac ggctgacctt
     2881 cgagcgcgac gtgttgtacc ctctggcggg tctggatccg gcgtcggcgg cgacgtacgc
     2941 cgaggtacag gccgtggtcg aggatctgag ctacgccggc aacgaggcgg cccggcggta
     3001 tctcgagggc cggatcgacg ccgcggcggc ggccgactgg ctggtgcggt ttgcgctgat
     3061 gtcgccggac cgggctgccc agcgggtgcg attcttcgac cggtatcgca gctatgtcat
     3121 caactacaat gtcggacggg acctggtggc gcggtatgtc gaacgggaaa gcggggccgg
     3181 tgcgactccg gaagcacggt ggcgggtatt cgccgcgctg ctggcgtcgc cccgcctgcc
     3241 gccggatctg gaagcacgcc gaacggtgaa cggtgaacag ggaacaggga acggtgaaca
     3301 gggaacggtg aacagggaac ggtaaacagg gaacggtaaa gaggtggtct cgtgagcaca
     3361 tcaaaccagt tcagtacggg ccgtttcgcg atggcgtatg gctggttccg gctgttaacc
     3421 gttccctgtt tactgtttac ggttcactgt tccctgtttg cagtcgggtc cgcccaggcg
     3481 ccggcgtgga aggtcgacag cgcccgcgcc cccgaaaagc tgctcgaatt caccgccacc
     3541 cagggtacct ggatctcggt cgatgtgtcg cccgacgggc gttcgattgc gttcgatctg
     3601 ctgggccaca tctacgaaat gccctacagc ggtggcgagg cgcgagccct gactcggggg
     3661 cggtcctgga atcacctgcc gcgctacagt cccgacggcg gcaggatgct gttcacttcg
     3721 gatcgcagtg gaaaagaggc cgtctggctg ctccatcgcg ggcccgactc actggagcag
     3781 gtgaccaagc tggacgaccg cacctatcag gcgtcctgga ctgccgacgg tcgggggttt
     3841 tacgcggtta ccatggacct gggagccaag ttcagcgcct ccaagttcga cttccacggc
     3901 tcgagactgc agctcacctc tccagtgttg ttctctcctc cggcgcagct ggcggaagac
     3961 tccgccggcc agcgggtgtt ctttgcccag ccggctggcc cggtgtacac caccgggttt
     4021 cagctcaagg cctacgatct caagaccggc gaggtccggg tgttccgctc ccgccggggt
     4081 ggggcggctt caccggcact gtcgcgcgat ggcaagtggc tcgcctatgt ccatcgcgat
     4141 gaccggcaaa gcgagctggt gctccatgag ctcgccactg ggcgggagcg ggtgctgctg
     4201 cagaacctgg atcgcgaccg ccaggaatcg ggcgcgggca cgacctacgg cgcctatccc
     4261 acgctggcct ggcatcccgc gggtcgagag ctggtggtgt tctacggcgg aacgcttcac
     4321 gcagtcgacg tcggaagcgg ggccacccgt gacatttcgt tccgggcccc ggtccggcgc
     4381 gagctggccc agacgatccg gttcccggtt ccggtgccgg ccgccggaaa gaccaccagc
     4441 cggtcgcacc ggttcggact ccgcaccgag cggggcgtgg tgtacgaagc gctgggcgat
     4501 ctatggctgc gggatggcgg cagcacgact aacctgaccc gctcgcccgc gatggagacc
     4561 agccccgcct acgatccggc cacccgcacg ttgtactacg cggcctggag tgatgacagc
     4621 ctgggcgcgg tctggtcgcg gcccatcgac gggggtgcag ctcccacccg gctgacccgg
     4681 gtgccggccc aatacgggtc gctgaccctc tcgcccgacg gcaagacgct ggcgctggtg
     4741 cgaggcaccg acgacctgct caggggcggt accctggaag gacagggacg tttcgagctg
     4801 gtggtgatcg gccccgatcg ggccgagcgc aaagtcaccg agatccagtg gggcgagggc
     4861 cagtacgcca acttcgccac caagcatccc cccggtgtga cgttttcgcc gagcggttca
     4921 gagttgtact tcagcgagtt tgccaacgat accctgcagc tcaagcggat ccggctggat
     4981 ggcctggacg aacagctgct gtaccggttt ccccacggtg tacgcgcggt tgtctcgccc
     5041 gacctccgct gggtggcgtt ccgggagtac acccgcacct tcgtgacgcc gttcgatttc
     5101 gcgggcaagc cggtggggat cagcgccttc gaccgccagg gcgtgagctt ccgggtggat
     5161 tcgctcgatg gcgactattt cggctggacc cgtggcgggc aggggctcca ctggacccgg
     5221 ggcaccggct tcttcgaaaa gccggtggac gacatcgtcg ccaaacgggg cgccgcccgg
     5281 agcaccaatc tcgccgtcga attcgatgtc gcggtgcccg cgggcaccat cgcgttgacc
     5341 aacgcgcggg tgctcaccat ggatgccggt cgccgggtgc tggaacgggc gaccatcgtg
     5401 gtgcggggca accggatcga ggcagtaggg gcggacattg ccccgccggc cggtgcccgg
     5461 gtattcgact tgaacgggaa gacggtgatg ccggggatga tcgacgccca cgcccactac
     5521 aatcccgaca tctcgaccct gcatgtggtg gagcagcagc accagggatt gctgtctaac
     5581 ctggcgcacg gcgtgaccac catgtacgag gtctacggca acgaccacaa ggactatctg
     5641 gtttccgacc tgcagcgggc cggggtggcc tggggtcctc ggctgctgtc ggtgggacac
     5701 ccgatctacg gccagcgctt cttccggccc aagctctacc ggcccattgt gacccaggcc
     5761 gatgccgatg aaatcgttcg cgccaacaag gcgcatggcg ccaccgcgct caaggactac
     5821 gcccagttca accggatgac ccgccaggcg ctctataccg cggcgcgccg ggaaggactc
     5881 aacgtggtcg ccgaaacagc ggtcgatccc cagatgaact ggaccatgtt gatcgacggg
     5941 gtctccgggc tggagcatac ggtgggactc accccgctct acgatgacgt cttgcggctg
     6001 tggggcgcga ccggtgccgg caacacgccg actctgatcg tggtctacaa cggacccgcg
     6061 ggggagcagc tcttccacca ggccgagcgg gtgtgggaga acccccgact gctgcatttc
     6121 ttccgcaagg atgatctgct gggcttccgg cgtcccaccc actacttcga cgacgatgtc
     6181 tacgccaccg agatggccgc cgatctcaag aaactgcatc gggccggagt ctcgctccag
     6241 gtgagcgggc acggccagat gcacgggttg gacaagcact gggagctgga gctcatgacc
     6301 cgaggcgggt tcacgcccgc ggaggtcctg gggttcgcca cgattcagag cgcccgctat
     6361 ctcggtctcg acggccagct cggctcgatc gaagcgggca agctggccga tctggtggtc
     6421 ttcggggccg atcccctggc cgatattcgg aatacccgct cggtggaatg ggtggtgcag
     6481 aacggcgtgg tgtattccgg cgccgatgcg gcccggatct ggcccaatcc ggcgccggcg
     6541 cccaagctct ataatctcag gtgaacggtt aacagtgaac ggtcaacagt gaacagcaaa
     6601 ccgggatatc gaatgcgacg gctcccattc cgtttcgtca gcctgacact cgggtgcgta
     6661 ctgctggccg ggccggctct ctccgcgcag acctcgacgc ggggcgtgac ccatggccga
     6721 cggccgaccg gtcgcctggt gatccgcaac gccctcgtga tcgaggggaa cggcacgccc
     6781 accatcgggc cctacgatat cgtggtcgaa ggcaaccgaa tcgtggagat ggtccccctc
     6841 gatccggtgg ccctgcggga agggcgccag cgccggcccg aagcgggcgc ggagatcgac
     6901 gggtcgggca agtatgtctt gccgggtctg atcaacctgc acggccacat ccaggacgag
     6961 cggggtggcg cgccccagcc gactgcctat cagaacaagc tctggttggc gtcgggcatc
     7021 accacggtgc gcgaggtcag ctcgggagcc gatcccaagg cctacgtggc gttccgggac
     7081 cagagcgccg cgggcgcgtt ggaagcaccc cggttcttta tctgcgccgg ctacacctcc
     7141 cacccggctc cgcgcacccc ggagcaggtc cgggcccggg tgcaggagct caagcggatc
     7201 ggggtggatt gcatcaagat cgtcgggctc gaccgggacc tgctggcggc catgctcgac
     7261 gaagcccaca agctcgggct gccggtggcg caccacgccg gggtcgagga gaccaacgcg
     7321 tgggatgaca ttcgcttcgg cacggcctcg atcgagcact ggtacggggt ccccgatgcc
     7381 gccatcctgg accgggtcca gaacttcccc gccgggtaca actacagcaa cgaagtggat
     7441 cggttccgct acgcgggccg gctctggcgt gaagccgatc cggcgcggct gtcgatggtg
     7501 ctcgattcca tggtggcacg gggagtggcg tgggacccg
//
LOCUS       DASWKS010000516        17780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2873908, whole genome shotgun sequence.
ACCESSION   DASWKS010000516 DASWKS010000000
VERSION     DASWKS010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17780
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2873908"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2027)
                     /locus_tag="VGA78_14685"
     CDS             complement(<1..2027)
                     /locus_tag="VGA78_14685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895175.1"
                     /translation="MHRLPLAVARFLFIVAIGAVATALGTVLALGGTGAGRTLLARVF
                     TAQSARLVRGSISIARIEGNFFNRLNLDSVVVRDTTGFPLASLGRVETRFRLTDLLAG
                     RIVFDRLSLIRPRLYLVKHREGRFNLEEVLRLGEGTGAGGPGPLVELRNLAIQDGIVT
                     VRTPWSPPGHLLTDGQRDSALRDQRTKAGKRIEDGGAGEGLQQVRTIEGLNAAIELLR
                     LASPDQQPILANIDSLAMVLNDPLLEVRALAGEIRQARDTLWFELHRVALPNTLGNAR
                     GLVSWPQDTVLFDFSFNATRMALADLRFVSADFPDLSGRGRLKALSRGGLLTEYQLSE
                     LEARDSVQRITGSLTALSHKFRGLGFRDLDLALQNVDLELVRPYLDTLPFRGRLSGRL
                     EADGYFDDMRVAVDWTFFDDRVEGHPPNRVVLRGPISIGSDQGFVFHEVQVDTMDLDL
                     PTVRLAVPAVILEGRAAGDGTLVGPWTNVTFTGRLSHHDVERPVSRAEGRVRIDTRGE
                     IVALDADLTFMPLEFEGVRRTFPTLTALGSVSGPLRMVGRLDSMSLWADLQGSLGQLR
                     AEGLVTLLPPHWAADSLLLNFANLDLAQVRGTGPPTRLSGRMLLAGSVDSAVAPEGSL
                     VLDLTHGWVRELELDSLTARVAVRDSVLTVDTATAFLPRVQVQAAGSLGWTR"
     gene            complement(2027..4159)
                     /locus_tag="VGA78_14690"
     CDS             complement(2027..4159)
                     /locus_tag="VGA78_14690"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9895176.1"
                     /translation="MSSTARTLQAPAGLAVFVFCALLGATAPATAQDVLVVRQLKFSG
                     NHSIDDATLAAAISTTKSSWFATAPVVRLFGLGEKRRLNQRDLERDVERLRILYRAFG
                     YMQATVDTTIRRTDEDVFITFRISEGEPIILTRFDIFGLDSLPRPDRLVRDLPLRVGE
                     PPNRFLLQATGDTITARLRDGGYPDSRVFLEHRAVDTAARTAEIELRVQSGRPKIIGN
                     VTVEGFRSGDSAFVIDLMAARPGNLFRSSELVRSQRNIVNTESYRFAAVDIDTAAYRT
                     TEGDSVPLLVRVVPGARYRVGASIGYGTDDCFRATGEWTIRHLFHRGRLLRVTGRISK
                     VGTGDPLGWGLDDTFLCGRLADDPIGSSLLNYTASVGFTQPAFLSPDNSLGLQFFAER
                     RSEFAVFLREETGVGATVTREGSRRIPISFGYRLAWGSTEASDANFCAYFNACNPADI
                     EVLTARQRQGVVTVGLSRLRVNNVLDPTRGSSFGLQGSHSASYTGSETLQRYTRFTGD
                     ISAYRPLTSGITAAVRLRGGVLFAPKALSDGVEFIYIPPEQRFYAGGANDVRGYDRND
                     LGPVVYVVLDSTRVPEEGEVDPDDVTVSPIGGSRLIIANAELRVPSPLFPSRWRMVAF
                     VDGGAVWQDTPDLNSPLRFRVTPGLGLRIGTPLGPARLDVAYRGYGYPPGTLYVTRSD
                     GSLVALATDYVKPRGNGFTFHLAIGQAF"
     gene            4221..5765
                     /locus_tag="VGA78_14695"
     CDS             4221..5765
                     /locus_tag="VGA78_14695"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9895177.1"
                     /translation="MLQPRFTFFAIWAASLLSACAKTGTGEILNYALSQDPRSLDPAL
                     STDVPTGEMVTLVFDNLVQVKPDGALAPGLAHRWTVDPAGAVYTFQLRSGVTFHDGSR
                     LSAPIVRGSLLRALAPGTSGGRGWPLYPIQGARAYAAGERPDVPGITVPDDSTLVLTL
                     EEPLNIFLTLLAMPVAAVVPENAGAELGEQPVGTGPWRFVSWAHDDQMVFARHDGYWD
                     TPPLADTLKVRIIPEELTQAAEYELGRLSVVEVPFGETTRWETAHVGELQRRAALRTL
                     YVAINTTRGPLRDPRVRRALNLALDREAILSNVAGGRGMLAAGSIPPGLAGHDSTRRP
                     YPYDPEGARRLLAEARPAALSLRLWRSNRPIYARIAQSIQQDLGNVGVTVEIVERDAA
                     SARSAARNGEADLFLTDWYGDYPDPENFTYPLFHSRNLGPGGNLAFLRDAGLDSLILR
                     ARATPDTAEKTRLMAEIDRRVFEMAPWIFLWFPVDLWAMRPEIEGWRIPAVFNGQRWR
                     EVRLRP"
     gene            5762..6682
                     /locus_tag="VGA78_14700"
     CDS             5762..6682
                     /locus_tag="VGA78_14700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895178.1"
                     /translation="MIRHLAGRLLLLVPTLAGVLAVTFLLLYVAPGDPVQAMVGERAD
                     PETIARLRAELRLDDPVPLQFAHYAGGVLRGDLGRSYITRRPIRDDLLTRFPATLRLA
                     AAAMSFAIALGLWVGIWGAWRPGSWSDRVATLGAYLGVSFPVYWVGLLLILLFAVTLR
                     WLPPSGSGGLAFLLLPALTLGMRSIALLARVTRTAMQEALGSDFVRTARAKGLSEGRV
                     VLTHGLRNALLPIITVIGLDFGSYLTGSILTETIFAWPGVGRYVLSAIEKRDLPAIQG
                     SILFLSFVFVIVNLLTDLVYAKADPRIAYD"
     gene            6819..8288
                     /gene="dacB"
                     /locus_tag="VGA78_14705"
     CDS             6819..8288
                     /gene="dacB"
                     /locus_tag="VGA78_14705"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEX9895179.1"
                     /translation="MALLLIVAAPLPAQSLSKQLDALLDAPPFNRHLWGIAVTDSAGK
                     TLYARNADKLFIPASNTKLVVSAAATALLPPEMTVRTSLYGTGPVVGGTLQGHLVLYG
                     RGDPSMSRRCFDVDTTRSGVCIADPFAPLRDLARGLKTGGVTTVLGDLVGDGSWFEPT
                     LLHPSWEHYDLAWWYAAPVSGLGFTDNSLEVLPVPTTIGAPAALTVWPNLGDVVLENR
                     TRTVAEGGRRTLEITREPATGRLIVVGDVPLGGRPRPEYAAVTDPNLYAAMALRRVLA
                     EEGIAVLGATRSTTDSMLFLSLRLRPPLAEVESRPVRDWIFPVLNTSQNWFAEMLLKQ
                     LGRQFGGSGSWDTGREVLHRFLIDSVGVDSTQAWLSDGSGLSSVNLISPQSFVRILSW
                     IRGHPRYPTFSAGLPRSGQAGSLRTRFVGTPLEGQVVAKTGSISTVNTLSGYLERSDG
                     RLLVFSIQANHHVLGGRAMIAAIDSIVVALAKTRLTGHR"
     gene            8373..8918
                     /locus_tag="VGA78_14710"
     CDS             8373..8918
                     /locus_tag="VGA78_14710"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX9895180.1"
                     /translation="MKIYTKTGDSGETGLFGGGRVAKNDPRVTAYGEVDELNSAIGLV
                     RATPPLDFSDPLLERIQRDLFAIGGQLASPDPDKVRAALAKAELDQTRVLEMEAAIDA
                     ADQELPPLTAFVLPGGTAKAATLHLARTVCRRAERAVVALSRSAEVPQLFLIHLNRLS
                     DLLFTLARLANHREGRHDSTW"
     gene            8983..10020
                     /gene="aroB"
                     /locus_tag="VGA78_14715"
     CDS             8983..10020
                     /gene="aroB"
                     /locus_tag="VGA78_14715"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEX9895181.1"
                     /translation="MGLLAHLPDIAARHVSGRRLVIIADDQVARALTIPLDVPVLTFP
                     AGEASKTRETWAHLTDQLLQRGFGRDTALVALGGGVTGDLAGFVAATFLRGVPFLQVP
                     TTLLAMLDASVGGKTGVDTPAGKNLVGAFHQPAAVVMDPAVLATVPEADLRAGLAEAV
                     KHAAILDAVHFGWLGGAAGPLLARDLGAIEMLIRRSVAIKVEIVQRDETEKGRRAVLN
                     AGHSVAHALEVATGYRISHGEAVAIGLVVEASLGEELGVTEPGTAAVLAALLQQFHLP
                     TGIPADTSPDALLDAMRADKKNRSGAIRLALLARIGTPAGDETKGWTTAVGEEEIRLA
                     IQKHQVLGTAY"
     gene            10298..11194
                     /locus_tag="VGA78_14720"
     CDS             10298..11194
                     /locus_tag="VGA78_14720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEX9895182.1"
                     /translation="MPRASHHTPRARPRGPSGSAFDQYLLDIRKLPLITDPREERKLA
                     LKAQKGDQEAAGRLVTANLRFVISYVKRFQGHGLDLSELVAIGNEGLLKAVKKFDPSH
                     KVKFISYAVWWIRQCVLKALAEQTRTVRIPVNQNAALVRMSRIETLLAQELGRSPTDA
                     ETAKVMNDSEENIRAARRMTSTEFSLDAPVERHDSTAVTFGERVAGAVASEIEESTDS
                     QLQREFIRRLFQNYLTPRERRILTLYYGLDEEGGEPMTLERIGGLLGVTRERVRQIRE
                     RAFEKLRRCPEIKGMQGFWQAA"
     gene            11339..11998
                     /locus_tag="VGA78_14725"
     CDS             11339..11998
                     /locus_tag="VGA78_14725"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX9895183.1"
                     /translation="MKLPLFPLDVVLFPGALLPLHIFEPRYQQMLGDCLAGDRRFGLL
                     PSGGEERPATGLIGTVAEIRATQPLPDGRANIVVSGERRFMLRRYLEDPAPYYVGLVD
                     PFDDEQEEVEAADEHTKDLRRLADRCAEALRQLTDTPAPANWAADAATLSFQVAAMLE
                     VDREFKRRFLGMRSAVHRVVLLLELLPTIVSDLEARGAVRTRASGNGTGGAHPDIAVQ
                     P"
     gene            11995..13434
                     /locus_tag="VGA78_14730"
     CDS             11995..13434
                     /locus_tag="VGA78_14730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX9895184.1"
                     /translation="MTVASHRSRVASLEVELAAIVGARWVRSRASELATYRGDGLPTH
                     ESTPRLVVLPGNRDEVIAVIRLLDRHRVPFVARGAGTGLSGGALADTDGVLLVLTRLN
                     RILKLDPRNRRAVVEPGVVNARLSEAAHRFGLYYAPDPSSQTACTLGGNVAENAGGPH
                     CLKYGVTTNHVVALDVVLPNGEVLRLGSPQGEPWGPDLVGLFVGSEGMFGVAIEITVR
                     LEPLPQDVRTLLAAFSSIRAASEAVSAIIASGVVPAALEMLDGPCVRAVEASIYAAGY
                     PTDAAAVLLVEVDGRPQAVAAEEGVVTRLLQAAGATTIRHAAGDEERARLWQGRKKAF
                     GAMGRLTRDLIVQDAVVPRSTLPDVLDRIAAIARQHQVMVVNVFHAGDGNLHPNICYD
                     RADPALAARVLTASREIMAACIAVGGSITGEHGVGSDKLEYMPLLFDETTLATMCDVR
                     RSFDPGGRANPGKVIPVHSCREWRAGGVR"
     gene            13431..14642
                     /locus_tag="VGA78_14735"
     CDS             13431..14642
                     /locus_tag="VGA78_14735"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX9895185.1"
                     /translation="MTDRVSARVREALGDEAVGQDPAGRPRVAPESSEDMARVMGLAH
                     SEGWKVRIEGRGTWCPSDTPADLVVTTAALDCVVSVAAPDLVATVEAGAAFGAVQRRL
                     AEDRVWLACDAPGRAQRSVGSIVATGTAGPLRHRFGPVRDQVLGGAVVTGDGRVVRPG
                     GTVVKNVAGYDLIKLITGGFGAFGVITELNLRLRAIPEVDRTLIARGNRDTLSSAGRD
                     LAEAAIDAVALELLSPAMAADPEWVLAVRLMGEESGVLGEADRTAATTALAWSTLAPE
                     QANGLWHGAAHAAHAGGVTLRLGVLLDGIDDTLDLLADHLDIGLVSAGAGSGSIRWTG
                     EAPVERMSTLRRAAAGREIPVTLERGPWAVRQAFGHFGLYREGVGALVGRLRETFDPG
                     HVLQVPLDPNV"
     gene            14635..15897
                     /locus_tag="VGA78_14740"
     CDS             14635..15897
                     /locus_tag="VGA78_14740"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HEX9895186.1"
                     /translation="MSDPSGTLDFSALDPCVHCGLCLTACPTYLATGDESDSPRGRIV
                     LMRALERGEIPASDSSLREHLDRCLGCRGCEPACPSGVGYGRGLEAARVMLVRENGLS
                     WKSRSVLRVFGHRALWKGMFGAARVLRSTGVARRLAGAGRVGRLMGMVASTDGRTDRR
                     TDRQNRPTVRPAVSPSVRPVVALFRGCVMDVLFDHVHDATRRTLAANGYQVVEVAGQV
                     CCGAPHDHAGDRVGAMTLAARNIARLQDAADLIVVDSAGCGAALREYGHLLGSEAAQR
                     FAAKVRDVTELLAEAGPRAGAPLPIDVAYDAPCHLQHAQRVHAAPLGVLRSIPELRLH
                     LLPGHDRCCGGAGAYSLLQPELSGQVLADKIATLQSALPSLAAVATGNPGCIMQIGSG
                     LRAAGLPLPVLHPVELVDRSYAAAGFYR"
     gene            15894..16907
                     /locus_tag="VGA78_14745"
     CDS             15894..16907
                     /locus_tag="VGA78_14745"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895187.1"
                     /translation="MTLPGIISTGEAHVVELRDGMRWVTTEAAMFRVEGTGAVDCLQG
                     LLTCDIVGPGSDSVTYGAMLTAKGMITVDFLVFRDGAGFTLIADPAARLPALDLFKRQ
                     LPPRFARASDRSDSHRVLWLLGAKTETVVRGADLPWPEHAGRLIVLPSDRGPALLGRP
                     PAPAPWNGILAGTPDGLAAIADRLTRAGGVEGTFDDLELARVLGGWPTLGREIDQRTL
                     PQEVRYDAIGGVSYTKGCYVGQETVARVHFRGHVNRRLRGLLWQGPAPAETDVLQGDK
                     PVGRLTSGVQLENRGVGLGLIRREVEPGATVRIGATAGVVVDLPFESGDREAPGMEPG
                     ASP"
     gene            complement(16924..17106)
                     /locus_tag="VGA78_14750"
     CDS             complement(16924..17106)
                     /locus_tag="VGA78_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895188.1"
                     /translation="MSKLVMVVALLGMAACAPRDEQPPAADTAAPAPITPVPADSAAA
                     IDSMARDTARDSTGTR"
     gene            17244..>17780
                     /locus_tag="VGA78_14755"
     CDS             17244..>17780
                     /locus_tag="VGA78_14755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HEX9895189.1"
                     /translation="MTTLPTTLADLRSTSWAELPLRRRTVRDEIRSNLMTMLERGEPL
                     FPGIVGYDETILPRLVNALLARHDFILLGLRGQAKSRILRALVRFLDERIPVVAGSEV
                     NDDPFDPVSKYARDLLDQHGPRTPIAWLERDQRYVEKLATPDVTIADIIGDIDPIKAA
                     RGGHLLSDELTMHFGLLPR"
BASE COUNT         2774 a         6008 c         6132 g         2866 t
ORIGIN      
        1 cgggtccatc ccagcgagcc cgcggcctgg acctggaccc gggggaggaa cgcggtcgcg
       61 gtgtcgaccg tcagcacgct gtcgcgcacc gccacccgcg cggtcaacga gtccagctcc
      121 agctcccgca cccacccgtg agtcaagtcg agcacgaggc tgccttcggg agccaccgcg
      181 gaatccaccg accccgcgag cagcatccgt cccgagagcc gcgtcggcgg accggtgccg
      241 cgaacctggg ccagatccag gttggcgaaa ttcagcagca gcgagtccgc ggcccagtgg
      301 ggcggcagca gggtcacgag tccctcggcc cgcagctggc ccagcgatcc ctgcagatcc
      361 gcccacaggc tcatgctgtc gagccgcccg accatccgga gcggtcccga gacgctgcct
      421 aacgccgtca gcgtggggaa ggtgcgacgc acgccttcga attcgagagg catgaaggtg
      481 agatcggcat cgagggccac aatctcgccc cgggtgtcga tccggacccg cccttcagcc
      541 cggctgaccg gccgctcgac gtcatggtgc gacagccggc cggtgaaggt cacattggtc
      601 cagggaccga ccagcgtgcc atcccccgcg gcccgcccct cgagaatcac ggccgggacc
      661 gccagccgga cggtgggcag gtcgagatcc atggtatcga cctggacctc gtgaaacacg
      721 aatccctggt cactcccgat gctgatgggg ccccgcagca cgacccgatt gggcggatgg
      781 ccctcgaccc gatcgtcgaa gaaggtccaa tcgaccgcca cccgcatgtc gtcgaagtag
      841 ccgtcggctt cgagccggcc cgacagccgt ccccggaacg gcagggtatc gaggtaggga
      901 cggaccagct ccaggtccac gttctgcagc gccaggtcca ggtcccggaa tcccaggcct
      961 cggaacttgt ggctgagggc ggtcaggctg ccggtgatcc gctggaccga atcgcgcgcc
     1021 tccagctcgc tgagctgata ctcggtcaac aacccgcccc gcgatagcgc cttgaggcgg
     1081 ccgcggccgc tcaggtccgg gaaatcggcc gacacgaacc gcaggtccgc cagcgccatc
     1141 cgggtggcgt tgaagctgaa atcgaagagg accgtatcct ggggccacga caccagcccc
     1201 cgggcgttgc ccagcgtatt cggcagggcg acccgatgca gctcgaacca gagagtatcc
     1261 cgcgcctgcc ggatctcgcc cgccagcgcg cgcacctcca gcagcgggtc gttcaacacc
     1321 atggccagcg aatcgatgtt cgccagaatg ggctgctgat ccgggctggc cagtcgcagc
     1381 agctcgatgg ccgcattgag accctcgatg gtgcggacct gctgcagtcc ctccccggcg
     1441 ccgccatcct cgatccgttt gccggccttg gtgcgctgat cgcgcagcgc ggaatcgcgc
     1501 tggccatcgg tcagcaggtg acccgggggc gaccagggag tccggacggt cacgatccca
     1561 tcctggatcg ccaggttgcg aagctccacc agcggcccgg gaccgccggc cccggtccct
     1621 tcacccagac gaagcacctc ctcgaggttg aaccttccct cccggtgttt gaccagatac
     1681 agccggggac ggatcagcga caaccggtcg aagacgatcc gcccggccag caggtcggtg
     1741 aggcggaatc gggtttcgac ccggcccagc gacgccagcg ggaagccggt ggtatcccgc
     1801 accacgacgc tgtcgagatt gagccggttg aagaaattgc cttcgatccg ggcaatcgag
     1861 atgctgcccc gcaccagccg cgccgactgg gcggtgaaca ccctcgccag cagtgtccgc
     1921 cccgcaccgg tgccgcccag agccaggacc gtgcctaacg cagtggccac ggcgccgatg
     1981 gcgacgatga aaaggaagcg ggccacggcc agcgggaggc ggtgcatcag aacgcctggc
     2041 cgatcgccag gtgaaaggtg aagccgttgc cgcggggctt gacgtagtcg gtggccagcg
     2101 ccaccaggga accgtccgat cgggtcacgt acagggtgcc gggcggatag ccgtagccgc
     2161 gataggccac atccagacgg gccgggccca gcggcgtccc gatccggagc cccagtccgg
     2221 gggtcacccg gaaccgcagc gggctgttca agtcgggcgt gtcctgccac accgcgccgc
     2281 cgtccacgaa cgccaccatg cgccagcggc tggggaagag cggcgacggc acccgcagct
     2341 cggcgttcgc gatgatcaac cggctgccgc cgatgggcga gacggtgacg tcgtccggat
     2401 cgacctcccc ttcctccggc accctggtcg agtcgagcac cacgtacacc accggcccca
     2461 ggtcgttgcg gtcatagccg cggacgtcgt tggcgccccc ggcatagaac cgctgctccg
     2521 gcgggatgta gatgaactcc actccgtcgc tcagggcctt gggggcgaac agcactcccc
     2581 cccgcaagcg cacggcggcg gtgatgcccg aggtcaaggg acggtaagcc gagatgtcgc
     2641 cggtgaaccg ggtgtagcgc tgcagcgtct cggagccggt gtaggacgcg gaatgggatc
     2701 cttgcagccc aaacgagctc ccccgggtcg ggtccagcac gttgttgacc cgcaggcgcg
     2761 acaatcccac cgtgaccacg ccctgccgct gccgcgccgt gagcacttcg atgtcggcgg
     2821 gattgcaggc gttgaagtag gcgcagaagt tggcgtcgct ggcttcggtg gagccccacg
     2881 ccagccgata tccgaagctg atcggtatcc ggcgggagcc ttcccgggtc acggtcgcac
     2941 cgacgccggt ctcctcccgg aggaagacgg cgaactcgga gcggcgctcg gcgaaaaact
     3001 ggagccccag gctgttgtcg ggggagagga aggccggctg ggtgaatccc accgacgccg
     3061 tatagttgag caggctcgag ccgatgggat catcggccag ccggccgcag aggaaggtgt
     3121 cgtcgagacc ccaacccagc gggtcgccgg tgccgacttt ggagatccgg ccggtcaccc
     3181 gcagcagacg gccgcggtgg aacagatggc ggatggtcca ctcgccggtc gcccggaaac
     3241 agtcgtcggt gccgtagccg atcgaggctc cgacccggta gcgcgcgccc ggcacgaccc
     3301 ggaccagcag cggcacgctg tcgccttcgg tggtgcggta cgccgcggtg tcgatgtcga
     3361 ccgcggcaaa gcgatagctc tcggtgttga cgatgttgcg ctggctgcgg accagctcgg
     3421 agctgcggaa caggttgccc ggccgggccg ccatcagatc gatgacgaac gcgctgtccc
     3481 cggaacggaa gccttcgacc gtcacgttcc cgatgatctt cggtcggccg ctctggaccc
     3541 ggagctcgat ctcagcggtt cgggcggcgg tatcgaccgc ccggtgctcc agaaacaccc
     3601 gactgtcggg atacccgccg tcgcgcagcc gcgccgtgat ggtgtcgccg gtggcctgga
     3661 gcagaaaccg gttggggggc tcgcccaccc gcagcgggag gtcgcgcacc aggcggtcgg
     3721 gccggggcaa ggagtcgagc ccgaagatgt cgaaccgggt caggatgatg ggctcaccct
     3781 cggagatccg gaacgtgatg aacacatcct cgtcggtgcg ccggatggtg gtgtcgacgg
     3841 tcgcctgcat atagccgaac gcgcggtaca gaatccggag ccgctcgaca tcgcgctcca
     3901 gatcgcgctg attcaagcgc cgcttctcgc ccagcccgaa aagccggacg accggcgcgg
     3961 tggcgaacca gctcgacttt gtggtcgaaa tggccgcggc gagcgtcgca tcatcgatgg
     4021 aatgattgcc ggagaacttg agttggcgca ccaccaggac gtcctgtgcc gtcgcgggag
     4081 cagttgcgcc gagcagggcg cagaaaacga acacggcgag ccctgccggt gcctggagcg
     4141 ttcgcgcggt tgacgacacg gtctaaatct agtagtatcg cggctttacg ccacactcgc
     4201 ccgctccggg aactggactc gtgctgcaac cccgcttcac gtttttcgcc atctgggcag
     4261 cttcgcttct ctccgcctgc gcgaaaaccg gcaccggcga gatcctcaac tacgccctct
     4321 cgcaggatcc ccgttccctc gatcccgcgc tgtcgaccga tgtccccacc ggcgagatgg
     4381 tgacgctggt cttcgacaac ctggtacagg taaaacccga tggcgccctc gctccgggac
     4441 tggctcaccg ctggacggtg gatccggccg gggcggtcta cacgtttcag ctgcgctccg
     4501 gcgtcacctt ccacgacggc agccggctct ccgccccgat cgtgcgtggg tcgttgcttc
     4561 gggcgctcgc gccgggaacc agcggcgggc ggggctggcc gctctatccc atccagggcg
     4621 cgagagccta cgccgcgggc gagcggcccg atgttccggg catcaccgtg ccggacgact
     4681 ccacgctggt gctcaccctg gaagagcccc tcaacatttt tctcaccctg ctcgccatgc
     4741 cggtggctgc cgtggtcccg gagaatgccg gggccgagtt gggcgaacaa ccggtgggga
     4801 ccggaccctg gcgcttcgtg tcctgggccc atgacgacca gatggtgttc gcccgtcatg
     4861 acggctactg ggacacgcca ccattggccg acacgctcaa ggtgcggatc atcccggagg
     4921 agctgaccca ggccgccgag tacgagctgg gtcgcttgag cgtggtggag gtgccgttcg
     4981 gcgagacgac ccgctgggaa accgcccatg tgggcgagct gcagcgacgg gccgcactgc
     5041 ggactttgta tgtggcgatc aacaccaccc gcggaccgct ccgcgatccg cgggtgcggc
     5101 gcgcgctcaa tctggcgctg gatcgagaag ccattctgag caacgtcgcg ggcggacgcg
     5161 gcatgctcgc ggccggatcc atcccacccg gactggccgg gcacgattcg acccgacgcc
     5221 cctatcccta cgacccggaa ggggcgcgcc gcctgctggc cgaggcccga cccgcggcgc
     5281 tgtcgctccg cctctggcgc agcaatcggc cgatctacgc ccggatcgcc caatcgatcc
     5341 agcaggatct cgggaacgtc ggtgtgacgg tggagattgt ggaacgcgac gcggcctcgg
     5401 cccgctccgc cgcgcggaac ggggaggccg atctcttcct gaccgactgg tacggcgact
     5461 atcccgatcc ggaaaacttc acctacccgc tgttccattc ccgcaatctg ggtccgggcg
     5521 ggaacctcgc cttcctgcgc gacgccggtc tcgactcgct gatcctgcgg gcccgcgcca
     5581 cgcccgacac ggccgagaag acccggctca tggccgagat cgatcgccgg gtcttcgaga
     5641 tggcgccctg gatttttctc tggttcccgg tggatctctg ggccatgcgg cccgagatcg
     5701 aggggtggcg catcccggcg gtcttcaacg gccagcgctg gcgcgaggtg cgcctccggc
     5761 cgtgatccga catctggccg ggcgcctgct cttgctggtt ccgaccctgg ccggagtgct
     5821 cgcggtgact ttcctgctgc tctacgtcgc gcccggcgac ccggtgcagg cgatggtggg
     5881 tgagcgggcc gaccccgaga ccatcgcgcg gctccgggcc gagctgcggc tggacgatcc
     5941 ggttccgctg caattcgcgc attacgccgg tggggtgttg cggggtgatc tggggcggag
     6001 ttacatcacc cggcggccca ttcgcgacga cctgctgacc cgcttcccgg ccaccttgcg
     6061 actggccgcg gccgcgatga gcttcgccat cgctctcggt ctctgggtcg gcatctgggg
     6121 cgcttggcgt cccggcagtt ggtccgaccg ggtggcgacg ctgggcgcct acctgggtgt
     6181 gtcgttcccg gtgtactggg tcgggctgct cttgattctg ctgtttgcgg tgacgctccg
     6241 ctggttgccg ccttcgggct ccggcggtct ggcctttctg ctgctgccgg cgctgacgct
     6301 gggaatgcgt tcgatcgcgc tgctggcccg ggtgacccgc accgcgatgc aggaggcgct
     6361 gggcagcgat ttcgtccgca ccgcccgcgc caagggactg tccgaaggcc gagtggtcct
     6421 gacccatggc ctgcgcaacg cgttgctgcc gatcatcacg gtgatcggcc tggacttcgg
     6481 gagctatctg accggctcca ttctcaccga aacgatcttc gcctggcccg gcgtgggtcg
     6541 gtacgtgctc tcggcgattg aaaagcggga tctgccggcc atccagggca gcattctgtt
     6601 cctgagtttt gtcttcgtga tcgtcaacct gttgacggac ctggtctatg cgaaggctga
     6661 tccgagaatc gcgtatgatt aatcggtcga aactggtcga agacggtcga aggcagtcga
     6721 agacggtcga agcagggtca aaactacagt ttccatcgcc ttcgaccacc ttcgacccgc
     6781 ttcgaccgcc ttcgaccagt ttcgaccgtc ttcgaccgtt ggcgctgttg ctgattgtgg
     6841 cagcaccgct cccggctcag tcgcttagca agcagctgga tgccctgctc gatgcgccgc
     6901 cgttcaaccg ccatctgtgg ggcatcgcgg tgacggacag cgccggcaag acgctctacg
     6961 cccgcaacgc cgacaagctc ttcatcccgg ccagcaacac caagctggtg gtgagcgcgg
     7021 ccgcgacggc cctgctgccg cccgagatga cggtccgcac cagtctctac ggcaccggtc
     7081 cagtggtggg cggcacgctg cagggtcacc tggtgctgta tggccggggc gaccccagca
     7141 tgagccgtcg ctgcttcgac gtcgatacca cccgcagcgg agtctgcatc gccgatccct
     7201 tcgcgccgct ccgggatctg gcccggggac tcaagaccgg tggcgtcacc accgtgctgg
     7261 gagacctggt gggcgacggc agctggttcg agccgaccct gctgcatccc tcctgggagc
     7321 actacgacct ggcgtggtgg tacgccgccc cggtgtccgg tctgggattc accgacaata
     7381 gcctggaagt gctgccggtg cccaccacga tcggtgcgcc ggccgcgctc accgtctggc
     7441 ccaatctggg tgacgtggtc ctcgagaacc ggacccgcac ggtggcggag ggcggccggc
     7501 gcaccctcga aatcacgcgg gagccggcca ccggccgtct catcgtcgtg ggggacgttc
     7561 cgctgggagg caggccccgc ccggagtacg cggcggtgac cgatcccaac ctctatgccg
     7621 cgatggccct gcgccgggtc ctggccgagg aaggcatcgc ggtgctcggc gctactcgct
     7681 ccaccaccga ctcgatgctg ttcctgtcgc tccggctgcg gcccccgctg gccgaagtgg
     7741 agtcacgacc ggtccgcgac tggatcttcc cggtgctcaa caccagtcag aactggttcg
     7801 cggagatgct gctcaagcag ctggggcggc aattcggcgg ctcgggcagc tgggacaccg
     7861 gccgcgaggt gttgcaccgg tttctgatcg actcggtcgg ggtcgattcg acccaggcct
     7921 ggttgagcga cggctcggga ctctcgtcgg tcaatctcat cagcccccag tccttcgtgc
     7981 ggatcctctc ctggatccgg ggccatccgc gttacccgac cttctccgcc ggactgccgc
     8041 gcagtggcca ggcggggtcg ctgcggaccc gcttcgtggg caccccgctg gagggacagg
     8101 tagtggccaa aaccggcagc atcagcacgg tgaacaccct ctccggctac ctggagcgtt
     8161 ccgatgggcg gctgctggtg ttctcgatcc aggccaatca tcacgtgctg ggcggacgag
     8221 cgatgattgc ggcgatcgac tccatcgtcg tagctctggc aaagacgcga ctgaccggcc
     8281 accggtgaac ggtcaacggc gaacggtgaa catccgggcg cttcgttcac tgtgtactgt
     8341 tcaccgttga ccagcctccg ggtaaggacg gcatgaagat ctacaccaag accggcgaca
     8401 gcggagagac tggcctgttc gggggcggac gcgtcgccaa gaacgatccc cgggtcacgg
     8461 cctacggcga ggtggatgag ctcaactcgg cgatcgggct ggtccgcgcc acgccgccgc
     8521 tggacttctc cgacccgctg ctggagcgga ttcaacgcga tctgttcgcc atcggaggcc
     8581 agttggcttc gcccgatccg gacaaggttc gcgccgccct ggcgaaagcc gagctggacc
     8641 agactcgggt gctggagatg gaggcggcca tcgacgcggc cgatcaggag cttccgccgc
     8701 tcacggcctt cgtgttgccg ggtggcaccg ccaaggcggc cacgctccac ctggcccgga
     8761 cggtttgtcg ccgggccgag cgcgccgtgg tggcgctttc ccggagcgcc gaagtccccc
     8821 agctgtttct gatccacctc aatcggctct ccgatctgtt gttcacgctg gcgcggctgg
     8881 ccaatcaccg ggagggacgt cacgacagta cctggtgatc gaccgccccc gccggcggtc
     8941 acgctcgagc atgcggccgg gtcgtgcccg gtctatatcg ggctgggact gctggcgcat
     9001 ctgccggaca tcgcggcccg gcatgtctcc ggccgacggc tggtcatcat cgccgacgat
     9061 caggtggccc gcgccctcac cattccgctg gacgtgccgg ttctcacctt cccggcgggc
     9121 gaggcctcca agacccggga aacgtgggcc cacctgaccg atcagttgtt gcagcgcgga
     9181 ttcggacgcg acaccgctct ggtggcgctg ggcggaggtg tgaccggcga cctggcaggg
     9241 ttcgtggccg cgaccttctt gcggggcgtg ccgtttctcc aggtgccgac gacgctgctc
     9301 gccatgctcg acgcgtcggt gggcggcaag accggggtcg ataccccggc cggcaagaac
     9361 ctggtcggcg ccttccatca gcccgccgcg gtggtgatgg acccggccgt gctggcgacg
     9421 gtcccggagg cggatctccg ggccgggctg gcggaggcgg tgaagcacgc ggcgattttg
     9481 gacgcggtgc acttcggctg gttaggcggc gcggcggggc cgctcctggc ccgcgatctg
     9541 ggcgccatcg aaatgctgat ccgccgtagc gttgctatca aggtcgaaat cgtgcaacgc
     9601 gacgaaaccg agaagggccg gcgggcggtg ctcaatgcgg gccacagcgt ggctcacgcg
     9661 ctggaggtgg ccaccggata ccgcatcagt cacggtgagg cggtcgcgat cggcctggtt
     9721 gtcgaagcct cgctgggcga ggagctcggc gtcaccgagc ccggcacggc cgccgtgctc
     9781 gcggcactgc tccagcagtt tcacctgccc accgggattc ccgccgatac ctcgcccgac
     9841 gcgctgctcg atgccatgcg ggcggacaag aagaaccgca gtggcgccat ccggttggcg
     9901 ctgctggcgc ggatcggcac cccggccgga gatgagacca agggttggac gactgcggtg
     9961 ggcgaagagg aaatccggct ggccatccaa aaacaccaag tactgggtac tgcgtactga
    10021 gctgaatagt gttgaaggac agtcgaagta caaccccagc tgcctcagtt cgttacgctc
    10081 gttgtccaca gtttggtgga taaaggggga tgtgcataac ctgcagaaaa tccataactt
    10141 agcccggctt cacgagatcc gttgttgaca gtgaatcgtt attgaccgtc ccatttttga
    10201 cgcctacatt ggccaaccac gccgcatgct agtcccctcg cggcgaattc aggcaacgag
    10261 agcagcagcg acaattcccg cagtccgtcg aggtggtatg ccccgggcca gccatcacac
    10321 tccgcgcgcg cggccgcgcg gaccatccgg cagcgcattc gatcagtact tgctcgacat
    10381 ccgcaagctg ccgctgatca ccgatccgcg cgaggagcgc aagctggcgc tcaaggccca
    10441 aaagggcgat caggaagcgg cggggcggct ggtgaccgcc aacctgcgct tcgtgatttc
    10501 gtatgtcaaa cggttccagg gtcacgggct cgatctgtcg gagctggtgg cgatcgggaa
    10561 cgagggactg ctcaaggcgg tgaaaaagtt cgacccctcc cacaaggtca aattcatcag
    10621 ttacgcggtg tggtggatcc ggcaatgcgt gctcaaggcg ctggcggagc agacccgcac
    10681 ggtgcgcatt ccggtgaacc agaatgccgc cctggtgcgc atgagccgca tcgagacgct
    10741 gctggcccag gagctgggac gcagccccac cgacgcggag accgccaagg tgatgaacga
    10801 ctcggaggag aacattcggg ccgcgcgccg gatgacctcc accgagttct ccctcgacgc
    10861 gccggtggaa cggcacgact ccaccgcggt aaccttcggc gagcgggtcg ccggcgccgt
    10921 ggccagcgaa atcgaggagt cgaccgattc ccagttgcag cgcgagttca tccgtcgcct
    10981 gttccagaac tacctcaccc cccgcgaacg ccggatcctg acgctgtatt acggtctcga
    11041 tgaggaaggc ggcgaaccga tgaccctgga gcggatcggc ggcctcctgg gtgtcacccg
    11101 ggagcgggtc cggcagattc gcgagcgcgc cttcgagaag ctgcgccgct gtcccgagat
    11161 caagggaatg cagggctttt ggcaggccgc ctagcggcct ggcaaaagcg tcggaaggtc
    11221 ggaagagtcg taagggtcgg aaacacttcc gacccttttt cattttacga cctttacgac
    11281 ctgtacgact tttccggccc tttcgacctc ccgtaagagg gagggttaat ttgaaggaat
    11341 gaagttgccg ctgttcccgc tcgacgtggt gctgtttccc ggtgcgctgc tgccgctgca
    11401 catcttcgaa ccgcgttatc agcagatgct gggcgactgc ctggccgggg atcgccgttt
    11461 cggcctgctg ccatcaggcg gagaggaacg tccggccacg gggctgatcg gaaccgtggc
    11521 cgagatccgc gccacccagc cgctgccgga cgggcgcgcc aacatcgtgg tctcgggcga
    11581 gcgtcgcttc atgctgcgcc ggtatctcga ggatccggcg ccgtactatg tcggcctggt
    11641 ggaccccttc gatgacgaac aggaggaagt cgaggcggcg gacgagcaca ccaaggatct
    11701 tcgccgcctg gcggatcgct gcgccgaagc gctgcggcag ctcaccgaca cgccggcccc
    11761 cgccaactgg gccgcggacg ccgccacctt gagctttcag gtggccgcca tgctcgaggt
    11821 ggaccgcgag ttcaagcgcc gcttcctggg gatgcggtcg gcggtccacc gggtggtgct
    11881 cttgctggaa ttgctgccca ccatcgtgag cgacctcgag gcccggggcg ccgtgcgcac
    11941 ccgggcctcg ggcaacggaa ccggcggcgc ccatccggat atcgcggtgc aaccgtgacc
    12001 gtggcgagcc accggtcgcg ggtcgcgagc ctcgaagtcg agctggccgc catcgtgggg
    12061 gcgcggtggg tccgctcccg ggcctcggag ctggcgacct accggggcga cggtctgccg
    12121 acccatgagt ccaccccccg gctggtggtg ctgcccggca accgcgacga ggtgatcgcg
    12181 gtgatccgtc tgctcgaccg gcaccgggtc cctttcgtcg cgcggggcgc ggggaccggg
    12241 ctctccggcg gggcgctggc ggacaccgac ggcgtgctgc tggtgctgac ccgtctgaac
    12301 cggatcctca aactggatcc gcgcaaccgg cgcgccgtgg tcgagcccgg ggtggtgaac
    12361 gcgcgtttga gcgaagcggc ccaccggttc ggactctact acgctcccga tccgtcgagc
    12421 cagaccgcct gcaccctggg cggcaacgtg gcggagaacg ccggcgggcc ccactgcctc
    12481 aaatacggcg tcaccaccaa ccacgtggtc gcgctcgacg tggtgctgcc caacggcgag
    12541 gtgctccgcc tggggagtcc ccagggggag ccctggggtc ccgatctggt cggtctcttc
    12601 gtcggcagcg aaggcatgtt cggcgtcgcc atcgagatca cggtgcggct cgagccgctg
    12661 ccgcaggatg tccgcaccct gctcgccgcg ttctcgagca tccgggccgc cagcgaagcg
    12721 gtctcggcga tcatcgcttc aggcgtcgta ccggccgcgc tcgagatgct ggacggtccc
    12781 tgcgtgcggg cggtcgaagc ctcgatctat gccgcggggt atcccaccga tgcggcggcg
    12841 gtgctgctgg tcgaagtcga cggccgtccc caggcggtcg ccgcggagga aggcgtggtc
    12901 acccggctgc tgcaggccgc cggcgcgacg accatccgcc acgccgccgg cgacgaggag
    12961 cgggcccggc tgtggcaggg acgcaagaag gccttcggcg ccatggggcg cctgactcgt
    13021 gacctgatcg tgcaggacgc cgtggtgccc cgctcgaccc tccccgatgt gctggaccgt
    13081 atcgccgcga tcgcgcggca gcaccaggtg atggtggtca acgtctttca cgccggcgac
    13141 ggcaacctgc atcccaacat ctgctacgat cgggccgatc ccgccctggc ggcgcgggtc
    13201 ctcaccgcca gtcgcgagat catggccgcc tgcattgcgg tgggcggcag cattaccgga
    13261 gagcacgggg tcggttccga caaactggag tacatgcccc tcctgttcga cgagaccacc
    13321 ctggccacga tgtgtgacgt acgccgcagc ttcgatccgg gcgggcgggc caatcccggc
    13381 aaggtgatac cggtgcattc ctgccgggag tggcgcgcgg gaggggtgcg atgaccgatc
    13441 gagtgagcgc ccgggtgcgc gaagcgctgg gcgatgaggc ggtaggccag gatcccgccg
    13501 gccggcccag ggtggcgccg gaatcctccg aggacatggc gcgggtgatg ggactggccc
    13561 acagcgaagg atggaaggta cggatcgagg gacggggcac ctggtgcccc agcgatacgc
    13621 cggcggatct ggtggtgacg accgcggcgc tcgattgcgt ggtctccgtg gccgcacccg
    13681 atctggttgc cacggtggaa gccggcgccg ccttcggcgc ggtgcagcgc cggctggcgg
    13741 aggatcgggt gtggctggcc tgcgatgccc ccgggcgagc ccagcgctcg gtcggctcca
    13801 tcgtggccac cggcaccgcc gggccgctgc ggcaccggtt cgggccggtc cgcgatcagg
    13861 tgttaggcgg cgctgttgtc accggagacg gtcgggtggt gcggccgggc ggaaccgtgg
    13921 tgaagaacgt cgccggctac gacctcatca agctgatcac cggcggtttc ggcgccttcg
    13981 gcgtgatcac cgagctcaat ctcagactcc gggccatccc cgaggtggat cgcaccctga
    14041 tcgcccgggg caatcgcgac acgctcagct cggcggggcg cgatctggcc gaagccgcga
    14101 tcgatgcggt agcgctggag ctgctttccc cggccatggc ggccgacccg gaatgggttc
    14161 tggccgtccg gctcatgggg gaggaatccg gcgtgctggg ggaggcggat cggaccgcgg
    14221 cgacgaccgc attggcgtgg tccacgctcg cccccgagca agccaacgga ctgtggcatg
    14281 gcgcggccca cgccgcccac gccggcggcg tcaccctgcg gctcggcgtc ctgctcgacg
    14341 ggatcgatga cactctcgat ctgctggcgg atcacctgga tatcggtctg gtcagcgccg
    14401 gcgccgggag cggctcgatc cggtggaccg gggaagctcc ggtggaacgc atgagtaccc
    14461 tgcgccgggc cgccgccggc cgcgagatcc cggtgacgct cgaacgaggt ccctgggcgg
    14521 tgcgccaggc gttcgggcat ttcggactct accgcgaagg ggtcggcgcc ctggtgggac
    14581 ggctgcgcga aacgttcgat ccgggacacg tgttgcaggt tcccctcgac cccaatgtct
    14641 gacccatccg gcaccctcga tttcagcgcc ctggatccct gcgtccattg cgggctctgc
    14701 ctcaccgcct gtcccaccta tctcgccacc ggcgacgaga gcgacagccc gcgcggccgg
    14761 atcgtgctga tgcgggcgct cgagcggggc gagatcccag cctcggattc cagtctgcgg
    14821 gaacacctgg accgctgcct cggatgtcgc ggctgtgaac cggcctgtcc ctcgggcgtg
    14881 ggctacggcc gaggcctgga agcggcgcgg gtcatgctgg ttcgggaaaa cggtctgtcc
    14941 tggaagagcc ggagcgtgct ccgcgtgttc ggacaccgcg ccttgtggaa gggcatgttc
    15001 ggcgccgccc gggtgctccg gagcaccggc gttgcccgac ggttggcggg agcgggccgg
    15061 gtgggtaggc tgatgggcat ggtggcctcg accgacggac ggacggaccg acggaccgac
    15121 aggcagaacc gtccgacagt ccggccggcc gtcagtccgt ctgtccgtcc ggtcgtcgcc
    15181 ctgttccgcg ggtgcgtcat ggacgtcctg ttcgaccacg ttcacgacgc gacccgtcgt
    15241 acgctcgccg ccaacggcta tcaggtcgtc gaggtcgcgg gccaggtctg ctgcggtgcg
    15301 ccgcacgatc atgccggcga tcgcgtcggc gccatgaccc tcgcggcccg gaacatcgcc
    15361 cggttgcagg atgccgcgga cctgatcgtg gtcgacagcg ccggctgcgg ggccgcgttg
    15421 cgggagtacg gtcacctgct gggcagtgag gcggcccaac ggttcgctgc caaggttcga
    15481 gatgtcaccg aactgctggc cgaggccggg ccccgggccg gagctcccct gccgatcgac
    15541 gtggcctacg acgccccctg ccatctacaa cacgcccagc gggtccacgc ggctccactc
    15601 ggagtactgc gttccatccc cgagctgcgg ctgcacctgc tcccgggaca cgatcgctgt
    15661 tgcggggggg ccggcgcgta ttcactgctc cagcctgaac tctcgggcca ggtgctggct
    15721 gacaagatcg ccaccctgca gagcgcgctg ccgtcgctgg ctgccgtcgc caccggcaac
    15781 cccgggtgca tcatgcagat cggttccggc ctccgggccg cagggctgcc gctgccggtg
    15841 ctgcatccgg tcgagctggt ggaccgatcc tacgcggcgg cggggttcta ccgatgaccc
    15901 tgccgggcat catcagtacc ggcgaagccc acgtcgttga gctccgggac ggtatgcgat
    15961 gggtgacgac cgaggcggcg atgttccggg tcgaaggaac cggggccgtc gactgcctgc
    16021 agggattgct cacctgcgac atcgtcggtc cggggagcga ttcggtgacg tatggcgcga
    16081 tgctcacggc caaagggatg atcacggtcg acttcctggt gttccgcgac ggggcgggct
    16141 tcaccctgat cgccgacccg gcggcccgac tgccggcgct cgacctcttc aaacgacagc
    16201 tccccccgcg gttcgcccga gcgagcgatc ggagcgattc ccaccgggtc ctctggctgc
    16261 tgggggcgaa gaccgagacc gtggtgcgcg gcgcggacct gccctggccg gagcacgccg
    16321 gccgcctgat tgtcctccca tcggatcggg gcccggcact cctgggtcgg ccgccggcgc
    16381 ccgcaccctg gaatggaatt ctggctggga cacccgacgg gttggccgcc atcgccgacc
    16441 ggctgacgcg ggcaggcggg gtcgaaggta cgttcgacga tctggagctg gctcgagtgc
    16501 tgggcggctg gccgaccctc ggccgtgaga tcgatcagcg aaccctgccc caggaggttc
    16561 gctacgacgc gatcggcggc gtgtcgtaca ccaagggctg ttatgtgggt caggagacgg
    16621 ttgcgcgggt gcactttcgg ggtcacgtga accgccggct gaggggcttg ctctggcagg
    16681 gtcccgctcc ggccgagacc gatgtcctcc agggagacaa gccggtgggc cgcctcacct
    16741 cgggtgttca gctggagaac cgtggggtgg gtctgggact gatccggcgg gaggtggaac
    16801 cgggcgcaac ggtcagaatc ggtgcaaccg ccggtgtggt cgtggacctt cccttcgagt
    16861 ccggagacag agaagccccg ggtatggaac ccggggcttc gccgtgacag tgacttccgc
    16921 aggtcatctg gtgccggtcg agtcccgtgc cgtatcgcgg gccatgctgt caatcgcggc
    16981 ggcgctgtcg gccggaaccg gggtaatggg cgcgggggcg gcggtatcag cagccggagg
    17041 ttgctcatcc cggggcgcgc aggcggccat cccgagcagc gcaacgacca tcacaagctt
    17101 cgacatcgga tctccttgcg gggggttggg gggacagtga gtgtgtctgc ccgaaccgtc
    17161 actgtcgtcg gtcaaacagg agcgggcgca acattaggcc gcggcatacg tttgtcaatc
    17221 acccaaaaag acaccgaatt cgtatgacaa cgcttccaac cactcttgcc gacctgcgct
    17281 ccaccagctg ggcggagctt ccgctgcggc ggcggacggt ccgggacgag attcgatcga
    17341 acctcatgac catgctggag cgaggggaac cgctgtttcc cggcatcgtg ggatacgacg
    17401 agaccatcct gccccgactg gtgaacgccc tgctcgcccg gcatgacttt atcctgctcg
    17461 gcctgcgcgg ccaggccaag agccgaatcc tccgcgccct ggtgcgattc ctcgacgagc
    17521 gaatcccggt cgtggccggc agcgaggtca acgatgatcc cttcgacccc gtcagtaaat
    17581 acgcgcgaga cctgctcgac caacacggcc ctcgcacacc catcgcatgg ctggagcggg
    17641 atcagcgtta tgtggagaaa ctggcgaccc cggatgtgac catcgccgac atcatcgggg
    17701 acatcgatcc catcaaggcg gcgcggggcg gacatctgct gtcagatgag ctcaccatgc
    17761 acttcggcct gctgccccgg
//
LOCUS       DASWKS010000517        20871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_273516, whole genome shotgun sequence.
ACCESSION   DASWKS010000517 DASWKS010000000
VERSION     DASWKS010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 20871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20871
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273516"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VGA78_14760"
     CDS             complement(<1..372)
                     /locus_tag="VGA78_14760"
                     /inference="COORDINATES: protein motif:HMM:NF012663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895190.1"
                     /translation="MLSTVLAVALMTQAAPYDLIVTGGRIVDGTGAPGFHADLGVRDG
                     KIAAIGRLRGQPARRTLEATGLVVAPGFIDMMGQTGAPFLRDPAAGLNLLTQGITTLN
                     AGEGGSDAPLSPAQARERGWAT"
     gene            509..976
                     /locus_tag="VGA78_14765"
     CDS             509..976
                     /locus_tag="VGA78_14765"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9895191.1"
                     /translation="MPTKPIPEGYHTATPYLIVKNGKKAIEFYKKAFNAKELSRFEDP
                     ATGTLGHAEIKVGDSIIMLADETADQAWRSPEAFGGTPVSLMLYVDDVDKVFPRAITA
                     GARETKPLTDQFYGDRSGTLTDPFGHVWTVATHKEDLTPEEMNRRFREATQHA"
     gene            complement(1116..3818)
                     /locus_tag="VGA78_14770"
     CDS             complement(1116..3818)
                     /locus_tag="VGA78_14770"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX9895192.1"
                     /translation="MPRIPVLPFALSLVALSGSPAQTRPTIPSADYGRWESPGPALLS
                     PDGRWLAYTVNRVNEENELRIRSLTRDTTSAVLYATAPSFPTNSRWLAYLVGVSPAER
                     DKLLQDKKPIHTRLGLLDLASGSTTSVDKVASFRFSPDGRFLAMRGYAPENSKREAAD
                     LMVRDLSAGTTATFGNVTGFAWADRGAALAFTVETESGAGNGVQLLDGNGRLRTLHSS
                     TDRYRALAWRKDGDDLAVLRTQPAAGFRDTAHALHAWTGLNRSAPIARMLPPDAVPSG
                     LRIAEGSPPAWTRAGDLVLVGLRPRDPARTDSSAKSTAKEKTSDVQVWHSRDVRIIPM
                     QKSQEQNDLRRGLMAAWSLADEKLVLAGSDLMNPIEVLEDGRHAVERSTTRYPFGTMF
                     GRSRMEVSLIDLRSGARRTVIDSVRYFYGASTTGRYLLYFRSGGYRVHDITTGGDIAL
                     GTGSGAVFTNQEYDTPTDELPPWGIAGWSKDDRSVLVYDRYDLWRLASDGSTATRLTN
                     GAADSTIHRYVRLNREERGIDLAQPLMLSLFGDFSKRGGYASWQAGRVERLRFEDARL
                     SRIIRADSAAAFAFTRERFDDAPDWFVAGPALRDGRQVSALNPFLRDAAWGKAELVGF
                     RSATGRPLQGILLYPANHDPARRYPMIVYTYEILSRNLHAWQAPSERSYYNFTAWTQQ
                     GYFVLLPDIVYRAGDPGRSALDAVVPAVHSVIARGLVDSSRVGLVGHSWGGYQATYLP
                     TQTGIFAASVAGAPITNFLSFAGAIHWTPGVAEFDHWETGQARMGAPPWEAWDAHVRN
                     SPAAFITQLKTPMLMMFGDADGTVDWHQGVEFYNFARRAGRPDFVLLVYPGEDHGLRK
                     KENQIDYHRRIIEWFGYYLKGEPAPPWMKEGVTWLDRKKALEGN"
     gene            3900..5462
                     /locus_tag="VGA78_14775"
     CDS             3900..5462
                     /locus_tag="VGA78_14775"
                     /inference="COORDINATES: protein motif:HMM:NF014819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX9895193.1"
                     /translation="MTRVGVFGWGVVAPRSPDIDAFARNLACADSWLAPFDGFGPDNF
                     LVGWPDFDFESCRPWVEARFPPSRFHQLQGKMGTPTQYTIGCFIQALQQNPGLEDELH
                     RLDTRTHVYIGTGVGDIPTIHDASIALYHAQRRWDRFWSEPCRNRSFGEWEKAGRPPE
                     GVPRHPAGATLDERDDLEGQWWHYWASRSPQLREYLEELRQIEAANVEGDIEKGKLHM
                     LKHKQRQTARLQEKWGAPDPPWRAVTPNVIWNIHNTPASQISMLGRFHGFSIAPIGAC
                     ATFGVCLKLAVDAIRRGEAKAVVVGATEPRPHPVTVGSMFSARVLAADAAVSKPLHGL
                     RGTHVAGGAVLWIVGDWDHMTSLGFRPLGMELLSVGVSNDAHHIITPSKEGPLLSVRE
                     ALRNAAVEPRDITTWDLHATATPGDYLEVENLLDIVPGSVLATARKGTFGHGMGAGGG
                     WELTAQYLGAERGTIFPTPLSESQLHPSIRGLHQLFVFDKACAVRPGVAGKLSMGVGG
                     VNACIISRPIAR"
     gene            5432..6391
                     /locus_tag="VGA78_14780"
     CDS             5432..6391
                     /locus_tag="VGA78_14780"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HEX9895194.1"
                     /translation="MHHFPAHRPLIVGALAAVILTGSREARRPPAPPHPPPGSPASDT
                     IPGTVWTVDDWRGFESKVRWGVEHRLDTLSVGTAIARLGETFVGTTYRPATLEVPGPE
                     RLVVNLRQLDCVTFIENVLALTRFIRQDGGALLADRPAARARYEKYLRELRYRNGVID
                     GYASRLHYFSEWLAHQEQHGVLRLLARELGGRLDREPIDFMSTHAAAYRQLSDPDVRA
                     AIVDIEARLNRGEGRWYIVEGQIAALAGRIQDGDLIAATSTVAGLDVAHTGLALWRAG
                     RLHLLHAPLVGKSVEISELPLADRILSIASQDGIMVARVMAGN"
     gene            complement(6555..8600)
                     /locus_tag="VGA78_14785"
     CDS             complement(6555..8600)
                     /locus_tag="VGA78_14785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895195.1"
                     /translation="MATTAARVLDSAAVAPSVLAIQDTVLGRLPAGVHPADTIILKRF
                     APAPVVQFIFQQPPWVMWSGAVLAAITALVLLWKLWPRFPAIWAWFRGWSRPVTVGFF
                     AAVGLVLLVAGVLGFKSYDYVMNDSRFCTGCHIFMPPGQVVEIADTGHYTLVSQLSGK
                     HDTLNCHSCHEFDPLGEARKMVLWMSGVRHLEEATDKYGAPAHGYVPRDICESCHKQG
                     TAKQSWQAIEATAGHRLHLQSDSASGKLMSGSECLTCHAQTAHVFKPTDSTCSQQGCH
                     LTDETSIQLGTMTGTTGLHCIVCHAFTAEVPALATLDSAGRTMRPAWGQCLSCHDMQR
                     VLPDFQLARDPHGGQCGVCHNPHNQETPGAAIKSCASAQCHADWRDEPFHVGAAHRRR
                     AQQCETCHQPHASEVDASDCEGCHQTVRERTRLRPPIPFDTTRALKRTALAPGPTDDP
                     PRGKGDAPPEDDASGVLFSALAPTSADSFEHRPHRRLACIECHTTSSGRAGLSFQPPR
                     GCDICHHQAPATSRCASCHQPQELSAARIMALHITVPKQPDRSRPVGFSHPKHEQYPC
                     LECHKAPVTMGLTPQVASCRDCHQNHHEPARDCTSCHTGYDIRAKHQPGIEASHQRCD
                     ACHTGATVRLLVPTRSFCASCHAEQKADHHPSRECSVCHLLSEPAEWRRRLVSGSGP"
     gene            complement(8638..10197)
                     /locus_tag="VGA78_14790"
     CDS             complement(8638..10197)
                     /locus_tag="VGA78_14790"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX9895196.1"
                     /translation="MRATYSLRAIALLLGFAAVGFITGCTNDEIVFVERPPFNDPADA
                     ASGFVGYYTSATKQTTCGNCHADFQAGWKETGHAEAYATLKANAGAQAFCYSCHTVTE
                     RGNAETGVIGHDKVQDSTYYDVQCESCHGPGLEHIQGVTQGQIVRPLARIGVGPDTSS
                     GCAACHTGTHHPFVEEWSLSGHAVTFPAAEAGNASCTPCHEARGAIKAWGVESNYSER
                     EQTEFQPVATCATCHNPHGSPNSANLRWSISDPEPSRNLCMKCHDRRTQPTPGSSRGN
                     APHAPQGSVLMGDAGYRAAGFTYDTATVFASHSSTRNPRLCAGCHVNQYTINDPASGN
                     FVFQVHGHTFLAAPCVDTQGIPTGSTDCAYTTAAREFSACAGSGCHASTTVALNALLN
                     SRDRIEQLAATIWVDGDNDETVDVPPTDQGYLPTIKATIPGELNPSDSRVSPADGAEF
                     NLKLCAERYANGDKSKGVHNPFLCEALLRANIDELRASYGLPSPPLAVLQMLKEPLGG
                     VKAKAVRISQR"
     gene            10453..11607
                     /locus_tag="VGA78_14795"
     CDS             10453..11607
                     /locus_tag="VGA78_14795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEX9895197.1"
                     /translation="MLHPTSHPWTGGQSLADHLEETGVSRREFVGFCSSFAAILGLGS
                     TGAAQIAAALQTQKRPTVIWIQLQECTGCVESVIRTAEPTIGDLVLDLVSLDYSHTLM
                     AASGQAAEKALADSMKANAGAYLLVVTGSVPLAENGIYTTIGGRTAKEILEESSRGAA
                     AIIAVGACAHWGSVQAARPNPTGAVGVRDVIRDKPVINIAGCPPIADVVTATVVHFLT
                     FGRLPAMDAEGRPRFAYGARIHDQCPKRANFDAGQFVEAFDDEAARKGWCLYKVGCKG
                     PATFSPCPIFQWNTRTSWPIGAGHPCIGCTEPQFWDTMSPFYERMPDVGGFGIERNID
                     LLGAALAVGALGGVAAHAAMTGVHQMRQKKVARELPVLPDQPKGPAGGEG"
     gene            11611..13329
                     /locus_tag="VGA78_14800"
     CDS             11611..13329
                     /locus_tag="VGA78_14800"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HEX9895198.1"
                     /translation="MAATRVVVDPITRIEGHLRIEAQSENGKISNAWASSTQFRGIET
                     IMQGRDPRDAWAFVQRICGVCTVVHAVASCRAVEDALDIRIPPNANTIRNLVHGMQYI
                     QDHVIHFYHLHALDWVDVVSALQADPAGTSRLAASLSPWPNNSATWFREVQERVKKFV
                     GSGQLGIFTNGYWGHPAYKLPPEANLMAVAHYLEALDWQRDVIRLHTVFGGKNPHPNF
                     LVGGMACAINLEDTGTINAERLTDVSDMIRRAARFVEQVYYPDLLAIASFYKDWAAIG
                     GGTRNYLACGEFPEGGDIREVDRLYFPRGIILDNNLSRVHPYDPMKVKEYITSSWYEY
                     PEGDASGLHPWEGETRPKYTGPPTPWSYLQDEKKYTWMKAPRYDGMAMQVGPLSRALV
                     AYASGHEDMRAAVGEVLGKLGVGPAALFSTLGRTAARGIETVLLARRMTAWYDDLITR
                     IKSGDTRTFSGDAWKPESWKPTSQGYGFLDAPRGALGHWVQIQNGKISRYQCVVPSTW
                     NCSPRDGQGVPGPYEAALMDNHPLLNPEQPIEILRTIHSFDPCMSCGVHVLDAEGNLV
                     TQVKVQ"
     gene            13326..14045
                     /gene="cybH"
                     /locus_tag="VGA78_14805"
     CDS             13326..14045
                     /gene="cybH"
                     /locus_tag="VGA78_14805"
                     /inference="COORDINATES: protein motif:HMM:TIGR02125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HEX9895199.1"
                     /translation="MTGFTLKHQVPPPQGRYTWVYLWGWPIRAMHWIAVIAIVLLTVT
                     GLYIGKPYFVTAREQGDPFMMGWFRAIHFGAAAALVMTAIVRFYWLFAGNKFERLAAL
                     FPIRTKDWVNMFKQAKYYLMIQPEKAPHYLGHNPMQQLSYTGIYAVALLMVVTGFALY
                     GQSNPGGLWYSATNWVVPILGGLQVVRWIHHVFTWVFLIFIPVHVYLAIRADFMERGG
                     VVSSIVTGGRFVPPDHHFEDD"
     gene            14048..14554
                     /locus_tag="VGA78_14810"
     CDS             14048..14554
                     /locus_tag="VGA78_14810"
                     /inference="COORDINATES: protein motif:HMM:TIGR00072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HEX9895200.1"
                     /translation="MRAKPTVVIGLGNPLMGDDGVGLELLGYLREHWSFSTDVVFVDG
                     GTWGMNLLPTIEDAGRVLFLDAVNAGQPAGTPVRLERNRIPRWLGLKLSPHQIDLKEV
                     LALAELRGTLPRQVVVVGIQPERVEMQVGLTPAVESGLDRAAELALATLERWGHRAVR
                     ENGVAIYA"
     gene            14547..14807
                     /locus_tag="VGA78_14815"
     CDS             14547..14807
                     /locus_tag="VGA78_14815"
                     /inference="COORDINATES: protein motif:HMM:NF013334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0051604 - protein maturation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase/urease maturation nickel
                     metallochaperone HypA"
                     /protein_id="HEX9895201.1"
                     /translation="MHELSVAMEICRIAEERLEPHRRSSLRRVGVLVGTDAGIEPSNL
                     EFCLEALLSQPPFGQAVPIIQHTAGHDLALAFLQVDDACPDD"
     gene            14824..15459
                     /gene="hypB"
                     /locus_tag="VGA78_14820"
     CDS             14824..15459
                     /gene="hypB"
                     /locus_tag="VGA78_14820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HEX9895202.1"
                     /translation="MAKNDELAAEVRRRLAEAGTVAFNLVSSPGSGKTLLLEKTLARL
                     GPELPMAVVTGDVQTQNDADRLARHTDRLVQAVVTGGACHLDSRQVMQALDAIDLAET
                     RLLFIENVGNLVCPAAWDLGEAAKIVVLSVTEGEDKPLKYPRMFREARWAVLNKIDLL
                     PYVPFDVDWALACARQVNPSLEFFLTSAHTGEGLDQWFDFLRRQVAQPAAV"
     gene            15411..17804
                     /gene="hypF"
                     /locus_tag="VGA78_14825"
     CDS             15411..17804
                     /gene="hypF"
                     /locus_tag="VGA78_14825"
                     /EC_number="6.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003998 - acylphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HEX9895203.1"
                     /translation="MVRLSSTPGGAAGGSVTGRVLLAASRCFVTGVVQGVGFRPFVHR
                     LALKHELHGWVRNDAGEVVIVVEGAPDAITRFLAALEAEAPPLARIERVEAIDAAPEG
                     LARFEVLASAAVDQTRRQPLPADVALCPQCLADLMDPANRRYRYPFITCTDCGPRFTV
                     IDQLPYQRDRTSMGAFAQCDECLREFQSPEDRRFHSETNSCPACGPTLWLELGSKPVE
                     PGRRESKAVDGGRRGSKRVTGNYEVVLRTSAGLLQSGEILAIRGLGGFHLAVDATNRQ
                     AVERLRARKRREAKPLAVMVRSVTEAAAVALVGPREEALLLAPERPIVLLPARPGAVA
                     AAVHPGLDQIGVMLAYTPLHVLLLELTGRPLVMTSGNLSEEPIAAGLPEARDRLGSIA
                     DGFLMHDREIRTRCDDSVVRPVGEHIIMIRRARGYAPLPLRLPLESPVPLLAVGPHQK
                     NTATLVHGNVAYITPHVGDLENLETLDQFQHLTRSYQRLFHVEPEVVAHDLHPGYLST
                     RIAQDSGLPVIGVQHHHAHIAAVAAEHGITGSVVGLAFDGTGYGDDGMVWGAEILLAD
                     LCGYERVAHLRYAPLPGGDLASRAPWRAALGYLSLEPERARSFERAFAEVPSLELALA
                     RTQIQRKLNAPRASSMGRLFDAAAAVLGVRATTGYEGQAAMELEALAARHDAGKLLPF
                     PVRETESGFLLDPVPLLGALGEMRNRGAGISALAADFHASVAAAAVRVARWAAALGGV
                     DTVALGGGTFQNVRLLTLIRDGLRQARLRVLTPERLSPNDGAISYGQAAVAAARLNQ"
     gene            17924..18211
                     /locus_tag="VGA78_14830"
     CDS             17924..18211
                     /locus_tag="VGA78_14830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HEX9895204.1"
                     /translation="MCLGIPGRISDMRTDEGLAMGVVDFGGIRRDVCLEYVADQVKPG
                     DYVVVHVGFAISRVDEDEARKTFQALKAMSQLDELEWMDEVADRSLGGMTP"
     gene            18208..19314
                     /gene="hypD"
                     /locus_tag="VGA78_14835"
     CDS             18208..19314
                     /gene="hypD"
                     /locus_tag="VGA78_14835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEX9895205.1"
                     /translation="MKYLEEYRDPGIARGLVEQILSTATRRWTLMEVCGGQTHTIVRQ
                     GLDELLAPAVEMIHGPGCPVCVTPLEQIDKAMALAARPDVIFSSFGDMLRVPGSDCDL
                     LQIRARGGNVKVVYSPLDALELARKNPDKQVVFFAVGFETTAPANAMAVWRAQQLGIP
                     NFSVLVSHVIVPPAMTAILSSSSNRVQGFLAAGHVCTVMGWTEYEPIAKQYRVPIIVT
                     GFEPLDILEGIWMAVKQLQEGRHEVENQYVRSVKRDGTVPARELVDRVFRVVNRKWRG
                     LGEIPLSGLGLREEFADFDAELRFGLSDMAVEEPAECRAGEVLQGILKPHRCPAFGVR
                     CTPENPLGAPMVSSEGACAAYYNFGRLRKTTEVA"
     gene            19311..20375
                     /gene="hypE"
                     /locus_tag="VGA78_14840"
     CDS             19311..20375
                     /gene="hypE"
                     /locus_tag="VGA78_14840"
                     /inference="COORDINATES: protein motif:HMM:TIGR02124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEX9895206.1"
                     /translation="MTTIDIGERALVCPTPGRIADRVQLGHGSGGKLAAQLLKERFLP
                     HFRNDVLEQLGDAAVIALGGVELAMSTDTFVVSPVEFPGGNIGSLAVHGTLNDLAMMG
                     ARPAYLSAGFVLEEGLELALLDRVVKAMANAAAAAAVPLVTGDTKVVERGKADGLFIN
                     TTGIGTLDPGFRPAPQRAQVGDAIIVSGPIGCHGMAIMAAREGLGLATELESDSATLW
                     PLVERLKASVGGQVHVLRDPTRGGVATALNEIAQAADVGFRLGETRLPVPPTVRGACE
                     MLGLDPLYVANEGILLAIVAATVAPAALKALRSHPLGAEARVIGEAIGDHPGMVTMRT
                     FMGGTRVVDMLPGDQLPRIC"
     gene            20457..>20871
                     /locus_tag="VGA78_14845"
     CDS             20457..>20871
                     /locus_tag="VGA78_14845"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEX9895207.1"
                     /translation="MSRVTIDALAAHAGQRVTVNGWVQTTRSSGKVAFAVLRDGTGYL
                     QCVVVKNQVAPEVWEQFGRLTQEASVAVAGDVRPEPRAPGGFELGLSDLTLLGESTEF
                     PIGPKEHGTTFLFEHRHLWLRSKRQVAIAKLRHEVV"
BASE COUNT         3378 a         6787 c         7124 g         3582 t
ORIGIN      
        1 ggtagcccac cctcgctccc gggcctgggc gggagacaac ggtgcgtcgg agccaccttc
       61 accggcgttg agggtggtga tcccctgggt cagcaggttc agaccggcgg caggatcccg
      121 caagaacggc gctccagtct gccccatcat gtcgatgaat cccggcgcta ccaccaaacc
      181 ggtcgcctcc agagtgcgcc gcgccggttg gccccgcagc cggccgatgg cggcgatctt
      241 cccgtcgcga actcccagat cggcgtggaa cccgggagct ccggtcccgt cgacaatccg
      301 gccaccggtc acgatgagat cgtagggcgc agcctgggtc atcagcgcaa cagcaagcac
      361 ggtggaaagc atgagtcact cgtcgggttg aagtcggtgc ggaaacgtta caccacctgg
      421 tccaaccatg ctattgaccc tgcggccggt ttggggcatg gtgagggtcc taccggtttt
      481 caccaaattc tgtgggagga gtcgcatcat gccaaccaaa ccaatccccg agggctacca
      541 taccgcgacg ccctacttga tcgtgaagaa cggcaagaaa gcgatcgagt tctacaagaa
      601 ggcgttcaac gccaaggagc tgagccggtt cgaggatccc gccaccggca ctctcggtca
      661 cgccgagatc aaggtcggtg actcgatcat catgctggcg gacgagacgg cggaccaggc
      721 atggcgttcg cccgaggctt tcggcgggac gcctgtgagc ctgatgctct acgtggacga
      781 cgtcgacaag gtatttcccc gggcgatcac cgccggtgcc cgggaaacca agcccctcac
      841 cgatcagttc tacggcgacc ggtcaggcac cctgaccgat ccctttgggc acgtgtggac
      901 cgtggccact cacaaggaag acctcacccc ggaggaaatg aaccgccggt tccgcgaagc
      961 aacccagcat gcctgaggtc tgaggttgga gggaggaggg tggagtcaat cacagaatgc
     1021 ccaatgccca gtgccgattg cagaggtcaa tgtgatttcc tggtcacctc tacaatgggc
     1081 attgggcact gggcactctg cattcgttcc caccttcagt tcccttcaag cgccttcttc
     1141 cgatccagcc atgtgacccc ctccttcatc catgggggcg ccggttcgcc tttgagatag
     1201 tagccgaacc actcgatgat ccggcggtga tagtcgatct gattctcctt cttccgcaga
     1261 ccgtggtcct cgccggggta caccagcaac acaaagtccg gccggcccgc ccggcgcgcg
     1321 aagttgtaga actcgacccc ctgatgccag tcgaccgtac cgtcggcgtc gccgaacatc
     1381 atcagcatcg gggtcttgag ctgggtgatg aacgcggcgg gtgaattccg cacgtgggca
     1441 tcccaggctt cccagggcgg cgctcccatc ctcgcctgtc cggtctccca gtgatcgaac
     1501 tcggccaccc cgggggtcca gtgaatcgct ccggcgaagc tcaggaagtt ggtaatcggg
     1561 gcaccggcca ccgaggctgc gaagatgcca gtctgggtcg ggagataggt ggcctggtag
     1621 ccgccccagg agtgaccgac cagcccgacc cgggaggagt caaccagacc ccgggcgatc
     1681 accgagtgga ccgcaggcac cacagcgtcc agggcggagc gtcccggatc gccggctcgg
     1741 tagacgatgt ccggcagcag gacgaaatag ccctgctggg tccaggccgt gaagttgtag
     1801 tagctccgct ccgaaggcgc ctgccaggcg tggagattgc gcgaaaggat ctcgtaggtg
     1861 tagacgatca tcgggtatcg ccgagccgga tcgtgattgg ccggatagag cagaatgccc
     1921 tggagcggcc gtccggtcgc gcttcgaaac ccgaccagct cggcttttcc ccaggcggca
     1981 tcacgcagga acggattgag cgcgctgacc tggcgtccgt cccgcagcgc cggtccggcg
     2041 acgaaccagt cgggcgcatc gtcgaagcgt tccctggtaa aggcgaatgc cgctgcgcta
     2101 tcggcccgga tgatgcgtga gagtcgcgcg tcctcgaacc ggagccgctc cacccgtccc
     2161 gcctgccagc tggcatatcc cccacgcttc gagaagtcgc cgaacaggct cagcatcagc
     2221 ggctgcgcga gatcgatgcc ccgctcctcg cgattcaggc gcacgtaccg atggatcgtg
     2281 gaatcggccg cgccgttcgt taggcgcgtg gccgtgcttc cgtcgctggc cagacgccag
     2341 aggtcgtacc ggtcgtagac caggaccgac cggtcatcct tgctccagcc ggcgatgccc
     2401 cagggtggca gctcgtcggt cggggtgtcg tactcctgat tggtgaagac ggcacccgac
     2461 ccggtcccca gcgcgatgtc gccgccggtc gtgatgtcat ggacccgata gccgccgctc
     2521 cggaaataga ggagatagcg tcccgtggtg ctggcgccgt agaagtagcg gacgctgtcg
     2581 atcacggtcc ggcgggcacc ggagcgcaga tcgatcaggc tcacctccat ccgggagcga
     2641 ccgaacatgg tgccgaacgg gtagcgcgtg gtggaccgct ccacggcgtg gcggccgtct
     2701 tccagaactt cgatcgggtt catgagatcg gaaccggcca ggaccagctt ctcgtcggcc
     2761 agggaccacg ccgccatgag tcctcggcgc aggtcattct gctcttgcga tttctgcatc
     2821 gggatgatgc gtacgtcgcg cgagtgccag acctgcacgt cggaggtctt ctccttcgcg
     2881 gtgctcttgg cgctcgaatc ggttcgggca gggtcccggg gacgcaggcc caccaggacc
     2941 aggtctccgg cgcgggtcca ggccggcggg ctgccttccg cgatgcggag cccgctggga
     3001 accgcgtcgg gcggcagcat ccgtgcgatc ggcgccgagc ggttgagccc ggtccaggcg
     3061 tgcagagcgt gagccgtgtc ccggaagccg gcggcgggct gggtccggag caccgcgagg
     3121 tcgtccccgt ccttgcgcca ggccagggcg cggtagcggt cggtggacga gtggagggta
     3181 cgcagccggc cgttgccatc gagcagctgg actccgttcc ccgcgccgga ctcggtctca
     3241 acggtgaagg cgagcgccgc accgcggtcg gcccaggcaa agccggttac gttgccgaag
     3301 gtcgctgtgg tccccgcgct caggtcgcgc accatcaggt cggcggcctc gcgcttgctg
     3361 ttttccggcg cgtagccccg catggcgagg aaacgcccat cggggctgaa ccggaagctc
     3421 gcgaccttgt cgaccgacgt ggtgcttccg ctcgccagat cgagcaggcc gagccgggtg
     3481 tggataggct ttttgtcctg gagcagcttg tcgcgctcgg ccggtgacac tccgaccagg
     3541 taggccagcc aacgggaatt ggtggggaag gacggcgcgg tggcatagag aacggcgctg
     3601 gtggtgtcgc gggtgaggct ccggatccgg agctcgttct cctcgttcac ccgattgact
     3661 gtgtaggcca accatcgacc atcgggagag agcagggccg ggccgggcga ctcccaccgg
     3721 ccatagtcgg cggaaggaat cgtgggccgg gtctgggccg gggaacccga aagcgccaca
     3781 agagacagag cgaatgggag aaccggaatc cgtggcatgc gacctctcgt gaccgatgag
     3841 tttcagactg gcaggccctg ccccgagact ataccttgcg gcgttcccaa ggagaacccg
     3901 tgacccgagt gggtgtattt ggctgggggg tggtggctcc ccggtcgccc gacattgatg
     3961 cctttgcccg aaacctcgcc tgcgccgact cctggctggc tcccttcgac ggtttcggtc
     4021 ccgataactt cctggtgggc tggcccgact tcgacttcga aagctgccgc ccctgggtcg
     4081 aggcccggtt cccgcccagc cggttccacc agctgcaagg gaagatgggc acgcccaccc
     4141 aatacaccat cggctgcttc attcaggccc tgcaacagaa tcccggtctc gaggacgagc
     4201 tgcaccggct ggatacccgg acccacgtct atatcggtac cggtgtcggc gacatcccca
     4261 ccatccacga tgcctccatc gcgctctatc acgcccaacg ccgctgggac cgcttctggt
     4321 cggagccctg tcgcaaccgg tcgttcggcg agtgggagaa ggcgggccgg cctcccgagg
     4381 gcgttccccg ccatcccgcg ggcgctaccc tggacgagcg ggacgacctc gaaggacagt
     4441 ggtggcacta ctgggcttcc cgctcgcccc agctgcgcga gtacctggaa gagttgcgtc
     4501 agatcgaggc ggccaacgtg gagggtgaca tcgagaaggg caagctccac atgctcaagc
     4561 acaagcagcg gcagaccgcg cggctgcagg agaagtgggg agcgcccgac ccgccctggc
     4621 gggcggtgac acctaacgtc atctggaaca tccacaatac cccggcctcg cagatctcga
     4681 tgttgggacg gtttcatggc ttcagcatcg ccccgatcgg ggcctgcgcc accttcggcg
     4741 tgtgcctcaa gctggcggtg gatgcgattc gccggggcga agccaaggcc gtggtggtgg
     4801 gcgccaccga gccgaggccg cacccggtga ccgtcggttc gatgttcagt gcccgggtcc
     4861 tggcggcgga cgccgccgtc tccaagccgc tccacggtct ccggggcacc cacgtcgccg
     4921 gcggcgccgt gctctggatc gtcggcgact gggatcacat gacctcgctc gggttccggc
     4981 ccctcggcat ggagctcctg agcgtggggg tgagcaacga tgctcaccac atcatcacac
     5041 cgtcgaagga ggggcccctg ctgtcggttc gcgaggccct gcgcaacgcg gcggtcgagc
     5101 ccagggacat caccacctgg gacctgcacg cgaccgcgac ccccggtgat tatctcgaag
     5161 tcgagaacct gctggatatc gtacccggtt cggtgctggc gaccgcccgt aagggcacct
     5221 tcggacacgg gatgggtgcc ggaggtggct gggagctcac cgcccagtac ctgggcgccg
     5281 aacgcgggac catctttccc acgccattgt ccgaatcgca gctgcatcct tccatccggg
     5341 gactgcacca gctcttcgtg ttcgacaagg cgtgtgctgt gcggccgggt gtggcgggga
     5401 aactctcgat gggcgtaggc ggcgtcaacg catgcatcat ttcccggccc atcgcccgct
     5461 gatcgtcggt gctctcgccg ccgtgattct cacgggcagt cgagaggcga gacgcccccc
     5521 ggctcccccc cacccgcctc ccggctcccc agcttcagat accatccccg ggacggtctg
     5581 gaccgtcgat gactggcgcg ggttcgagag caaggtgcgc tggggcgtcg agcaccgact
     5641 ggatactctt tcggtcggta cagccatcgc tcggctgggc gaaaccttcg tggggaccac
     5701 gtaccggccc gcgaccctgg aggtaccggg tcccgagcgg ctggtggtca acctgcgcca
     5761 gctcgactgc gtcacgttca tcgaaaacgt tctggcgctg acccgcttca tccggcaaga
     5821 cggcggggct ctgctggccg atcgaccggc ggcccgagcc cgctacgaga aatacctccg
     5881 cgagctccgc tatcgaaacg gcgtgatcga cggctatgcc agccggctgc attatttctc
     5941 ggaatggctg gcgcaccagg agcagcatgg ggtgctgcgc ctgctggcgc gcgaactggg
     6001 cggcaggttg gaccgggagc cgatcgactt catgtcgacc catgccgcgg cctatcgcca
     6061 gttgagtgat cccgacgtgc gggcggccat cgtcgacatc gaggccagac tcaaccgggg
     6121 tgaagggcgc tggtacatcg tggagggcca gatcgccgcg ctggccgggc ggatccagga
     6181 cggtgacctg attgcggcga cctcgacggt cgccggtctc gatgtcgccc acaccggcct
     6241 cgccctctgg cgagccggcc ggctccacct gctgcacgcc cccctggtcg gaaagagcgt
     6301 ggagatctcc gagctgccgt tggccgatcg gatcctctcc attgcgagtc aggacggtat
     6361 catggtggcc cgggttatgg cgggcaacta gttcttcgac cgccttcgac cccttcgact
     6421 gccttcgacc cccgttgacc gatcaggcaa ctcggggaat gtcgcgtcca tgacacgcca
     6481 accccccggt cggtccctgt atcgcctcgc tgtgcaggat gctgtcggcc agcaggcgag
     6541 caacaggtat cgcgttatgg cccgctcccc gataccagac ggcgtctcca ctccgcgggc
     6601 tcgctcagca ggtggcacac cgagcactcg cgggatggat gatgatcggc cttctgctcg
     6661 gcgtgacatg acgcgcagaa cgagcgggtg ggcaccagca gacggaccgt ggcgccggtg
     6721 tggcaggcat cgcagcgctg atgactagcc tcgatgccgg gctggtgctt cgcccggata
     6781 tcgtatccgg tatggcagct ggtgcagtcg cgcgccggct catgatgatt ctgatggcaa
     6841 tcgcggcacg aggcgacctg cggtgtcagc cccattgtca cgggagcctt atggcactcg
     6901 aggcacgggt actgctcgtg cttcggatgg gaaaagccga ccgggcggct gcggtccggt
     6961 tgcttcggca ccgtgatatg cagtgccatg attcgagccg ccgagagctc ttgcggctgg
     7021 tggcagctcg cacagcgcga cgtggccggt gcctggtgat gacagatgtc gcagccgcgg
     7081 ggcggctgga aggagagccc ggcgcgacca gacgaggtgg tgtggcactc gatgcacgcc
     7141 aacctccgat ggggccggtg ctcgaagctg tccgccgacg tcggggcaag ggccgagaac
     7201 aaaacgccgg aggcgtcatc ctccggcggc gcgtcacctt tgcctcgtgg cgggtcgtcc
     7261 gtcggccccg gcgcgagggc cgtgcgtttg agggccctcg tggtatcgaa cgggatcgga
     7321 ggccggagcc gggtccgttc ccgcaccgtc tggtggcagc cctcacagtc gctggcgtcc
     7381 acctccgagg cgtgcggctg gtgacaggtc tcacactgtt gggctcttcg ccgatgggcg
     7441 gcgccgacat gaaacggctc gtcgcgccag tcggcgtggc actgggccga ggcgcagctc
     7501 ttgatggccg ctcccggggt ctcctggttg tgcgggttgt ggcacacccc gcattgcccc
     7561 ccatgcggat ccctcgccag ctggaaatcg ggcagcaccc gctgcatgtc gtgacagctg
     7621 aggcactgcc cccaggcggg acgcatggtc cgacccgccg aatccagggt cgcaagcgcc
     7681 ggtacctcgg ccgtgaaggc atggcagacg atgcagtgga gcccggtggt tccagtcatc
     7741 gtcccgagct ggatgctggt ttcgtcggtg aggtgacacc cttgctggga gcatgtggag
     7801 tcggtcggtt tgaaaacgtg cgccgtctgc gcgtggcagg tgaggcattc cgagcccgac
     7861 atgagcttgc ccgaagcgga atccgattgc aggtggagcc gatgccccgc ggtcgcctcg
     7921 atggcctgcc acgactgctt cgccgtgccc tgcttgtggc acgattcgca gatgtccctc
     7981 ggcacgtagc cgtgggcagg cgcgccgtac ttgtccgtcg cctcctccag gtggcgcacc
     8041 cccgacatcc agaggaccat cttgcgggcc tcgcccagcg gatcgaattc gtggcagcta
     8101 tgacagttga gcgtgtcgtg cttgccggag agctgcgaca cgagggtgta atgcccggtg
     8161 tcggcgattt ccaccacctg gccggggggc atgaagatgt ggcacccggt acagaaccgg
     8221 gagtcgttca tcacatagtc gtaactcttg aagccaagca ctccggcgac caacaacacc
     8281 agcccgaccg cggcaaagaa tcccacggtc accggacggc tccatcccct gaaccaggcc
     8341 cagatggcgg ggaacctggg ccacagcttc cacagcagca ccagggcggt gatcgctgcc
     8401 agcacggcgc cgctccacat gacccagggc ggttgctgaa agatgaactg caccaccgga
     8461 gcgggggcga accgcttgag gatgatggta tccgccgggt ggactcccgc cggcagccgt
     8521 cccaagaccg tgtcctggat cgccagcacg gacggcgcga ccgccgccga gtcgaggact
     8581 cgggcggcgg ttgtggccac taccgggtgt tgcgcgagca ccgtgagcga gtcggcctta
     8641 ccgctgggat atcctgacgg ctttggcttt caccccgcca aggggttcct tcagcatctg
     8701 tagcaccgcc agcgggggag agggtagccc ataggacgcg cggagctcgt cgatattggc
     8761 ccggagcagc gcttcgcaca agaatgggtt gtgcacaccc ttggatttat cgccgttggc
     8821 atagcgttcg gcgcacagct tcagattgaa ctcggcgccg tcggcgggac tgacgcgcga
     8881 gtcgctcggg ttgagctcgc ccggaatggt cgccttgatg gtcggcagat agccctggtc
     8941 ggtgggcggc acgtccacgg tctcgtcgtt gtccccgtcc acccagatcg tggccgccag
     9001 ctgctcgatc cgatcgcgcg agttgagcag ggcattgagt gccaccgtgg tgctggcatg
     9061 gcaacccgaa ccggcgcagg ctgagaactc ccgggcggcg gtggtgtagg cgcagtccgt
     9121 cgagccagtc ggaatgccct gggtgtcgac gcacggagcc gccaggaatg tatgcccgtg
     9181 tacctggaag acgaagttac cgctggccgg atcgttgatg gtgtactggt tcacgtggca
     9241 gccggcgcag aggcgagggt tgcgggtgga cgagtgcgaa gcaaagaccg tcgcggtgtc
     9301 gtacgtgaag ccggccgccc ggtagccggc gtcacccatg agcaccgagc cctggggcgc
     9361 atgcggagcg ttgccgcggg agctgcccgg cgtcggctgg gtccggcgat cgtggcactt
     9421 catacacagg ttgcggctgg gctccgggtc gctgatggac caccgcagat tggccgagtt
     9481 gggcgagccg tgcgggttgt gacacgtagc gcaggtcgca accggctgga actcggtttg
     9541 ttcccgctca gagtagttgg actccacccc ccacgccttg atggcgccgc gggcttcgtg
     9601 gcaaggcgtg cagcttgcgt tgccagcctc cgccgccggg aaggtcacgg cgtggcccga
     9661 gaggctccac tcctccacga acggatggtg ggttccggtg tggcaggcgg cacagccgga
     9721 cgacgtgtcg ggacccacac cgatccgagc cagcgggcgg acgatctgtc cctgagtgac
     9781 gccttggatg tgttccagtc cagggccgtg gcagctctca cactgtacgt cgtagtaagt
     9841 gctgtcctgc accttgtcgt gcccgatgac gcccgtttcg gcgttgcccc gctcggtcac
     9901 ggtgtggcac gaatagcaga aggcctgcgc tccggcgttg gctttgaggg tcgcgtaggc
     9961 ctcggcgtgc ccggtctcct tccagccggc ctgaaagtcg gcatggcagt tcccgcaggt
    10021 cgtctgtttg gtggctgagg tgtagtagcc gacgaatccg ctggcggcgt cggcgggatc
    10081 gttgaatggg ggccgctcga cgaacacgat ctcgtcgttg gtacacccgg tgatgaaccc
    10141 gaccgccgcg aatcccagca gcagtgcgat ggcccgtagc gaataggtgg cgcgcatcgt
    10201 tcgcctcgcc gtagggattg agggtgatcc taccgtagat ctacggctga agcaaatctt
    10261 catgctcgaa ccctatagca caacatattg tcaggtaaca acttagaaaa gtgaacttca
    10321 tccttcctta agcatctttt cacggtcggc tctccaacat tgtccgcgtg gtcgcttccg
    10381 gagcggccgc ccaccttcac gtgggggcca gcccggcagt accgcatcca tccaatggaa
    10441 cggagggctg tcatgctgca tccgacgtcc cacccctgga ccggcggaca atccctggcg
    10501 gaccatctcg aggagaccgg cgtctcccgt cgcgagttcg tggggttctg ctcctccttc
    10561 gcggccatcc tggggctggg cagcaccggg gcggcgcaga tcgccgcggc gctccagacc
    10621 cagaaacgtc cgaccgtcat ctggatccag ttgcaggaat gcaccggctg tgtcgagtcg
    10681 gtgatccgga cggccgagcc gaccatcggc gacctggtcc tcgatctggt ctcgctcgat
    10741 tactcccaca cgctgatggc ggcctcgggc caggcggcgg aaaaggctct ggccgattcg
    10801 atgaaggcca acgccggcgc ctatctgctg gtggtgaccg gctcggtgcc gctggccgag
    10861 aacgggatct acaccacgat cggcgggcgc accgccaagg agattctgga ggaaagctcc
    10921 cggggtgcgg ccgcgatcat cgcggtgggc gcctgcgccc actgggggag cgtgcaggcc
    10981 gcgcggccca atcccaccgg tgcggtgggg gttcgcgatg tcattcgcga caagccggtc
    11041 atcaacattg cgggctgccc gcccatcgcg gatgtggtca ccgcgacggt ggtccacttc
    11101 ctcaccttcg gccgtttgcc ggccatggat gccgaaggcc gtccccgctt cgcctatggc
    11161 gcccggatcc acgatcagtg tcccaagcgc gccaacttcg acgcgggcca gttcgtggaa
    11221 gccttcgacg acgaagccgc ccgcaagggc tggtgcctgt acaaggtcgg ctgcaagggg
    11281 cccgcgacct tctcaccctg tcccatcttc cagtggaaca cccgcaccag ctggcccatc
    11341 ggggcggggc acccctgtat cggctgcacc gagccgcaat tctgggacac catgagcccg
    11401 ttctacgaac ggatgccgga tgtcggcggc ttcgggatcg agcgaaacat cgatctgctg
    11461 ggcgccgccc tggcggtggg cgcgctgggt ggtgtggccg cccatgccgc gatgacggga
    11521 gtgcatcaga tgcgtcagaa gaaagtggcg agagagctgc cggtgctgcc ggatcagccc
    11581 aaaggacctg ccggcgggga gggttgagtc atggccgcta ccagagtcgt cgtcgacccc
    11641 atcacccgca tcgaaggcca tttgcggatc gaagctcagt cggagaacgg gaagatctcc
    11701 aacgcctggg cctcgtcgac ccagtttcgc gggatcgaga ccatcatgca ggggcgcgat
    11761 ccgcgcgatg cctgggcctt cgtccagcgg atctgcgggg tgtgcaccgt agtccatgcg
    11821 gttgccagct gccgggcggt ggaagacgcg ctcgacatcc ggattccgcc caacgccaac
    11881 accatccgga acctggtcca cgggatgcag tacatccagg accacgtcat ccacttctat
    11941 catctgcacg cgctcgactg ggtggacgtg gtcagtgcgc tccaggccga tccggccggg
    12001 accagccggc tggcggcgtc gctctcgccc tggcccaaca actcggccac ctggttccgg
    12061 gaggtgcagg agcgggtcaa gaagttcgtg ggcagcggcc agctcggcat cttcaccaac
    12121 gggtattggg gtcatccggc ctacaagctg ccgcccgaag ccaacctgat ggcggtggcg
    12181 cattacctcg aagccctcga ctggcaacgc gacgtcatcc ggctccacac cgtcttcggc
    12241 ggcaagaacc cgcaccccaa cttcctggtg ggcgggatgg cctgcgccat caacctggaa
    12301 gacaccggca cgatcaacgc cgagcgactc accgacgtct ccgatatgat ccgccgggcg
    12361 gcccggttcg tggagcaggt gtactacccc gacctgctgg ccattgcctc cttctataag
    12421 gactgggcag cgatcggggg tgggacccgg aattacctgg cctgcggaga gtttcccgag
    12481 ggtggtgaca tccgtgaggt cgaccggctc tacttcccac gggggatcat cctcgataac
    12541 aacctgagcc gggtgcaccc ctacgacccg atgaaggtca aggagtacat caccagctcg
    12601 tggtacgaat atcccgaggg cgatgcctcg gggctccacc cctgggaagg cgaaacccgg
    12661 cccaaataca ccgggccgcc gacgccgtgg agctatctcc aggacgagaa gaagtacacc
    12721 tggatgaagg cgccccggta cgacggcatg gcgatgcagg tgggcccctt gtcccgggcg
    12781 ctggtggcgt acgcctccgg acacgaggac atgcgggccg ccgtgggcga agtgttaggc
    12841 aagctcggcg tcggtcccgc ggcgctcttc tccaccctgg gacgcaccgc ggcccggggg
    12901 atcgagaccg tcctgctggc ccggcggatg acggcctggt acgacgacct cattacccgg
    12961 atcaaatcgg gcgacacccg taccttcagc ggcgacgcct ggaagcctga gtcgtggaag
    13021 ccgacctccc agggctacgg gttcctggac gctccccgcg gcgccctggg gcactgggtc
    13081 cagattcaga acgggaagat ctcccgctac cagtgcgtgg tgccgagcac ctggaactgc
    13141 tcgccccggg acggccaggg cgttccgggc ccgtatgaag cggcgttgat ggataaccat
    13201 ccgctgctca atccggaaca gccgatcgag atcctgcgca ccatccactc gttcgatccc
    13261 tgcatgtcct gcggcgtgca tgtgctcgat gcggagggga atctcgtgac gcaggtcaag
    13321 gttcaatgac cggcttcacc ctgaaacacc aggtgccgcc tccgcagggg cggtacacct
    13381 gggtgtatct ctggggctgg cccatccggg ccatgcactg gatcgcggtc atcgccattg
    13441 tgctgttgac ggtgaccggc ctgtacatcg gcaagcccta tttcgtgacc gcgcgcgaac
    13501 agggcgatcc cttcatgatg gggtggttcc gggcgattca ttttggcgcc gccgccgcgc
    13561 tggtgatgac tgccatcgtc cggttctact ggctcttcgc cggcaacaag ttcgagcggc
    13621 tcgccgcgtt gttcccgatc cggaccaagg attgggtcaa catgttcaag caggcgaagt
    13681 actacctgat gatccagccg gagaaggcgc cccactatct gggtcacaac ccgatgcagc
    13741 agctgtcgta caccggcata tacgcggtgg cactgctgat ggtggtcacc gggttcgcgc
    13801 tctatggtca gtccaacccg ggcgggctct ggtattcggc caccaactgg gtggtgccga
    13861 ttctgggtgg cctgcaggtg gtgcggtgga tccaccacgt gttcacctgg gtgttcctga
    13921 tcttcatccc ggtccacgtc tatctcgcga tccgggccga cttcatggaa cggggcggcg
    13981 tggtgtcatc cattgtgacc ggtggccggt tcgtgccgcc cgatcatcac ttcgaggacg
    14041 attgaaggtg cgcgccaagc caaccgtggt gatcggcctg ggcaatccgc tcatgggcga
    14101 tgacggcgtc gggctcgagc tcctggggta cctgcgggag cattggagtt tctccaccga
    14161 cgtggtcttc gtggacgggg gaacctgggg gatgaacctg cttcccacca tcgaggacgc
    14221 cggccgagtc ctgttcctcg atgccgtcaa tgccggtcag ccggcgggaa cccccgtgcg
    14281 gctggagcgc aaccggatcc ctcgctggct cgggctcaag ctgtcgcccc atcagatcga
    14341 cctcaaggaa gtgctggccc tagccgagct gcggggaacc ttgccccgcc aggtggtggt
    14401 ggtgggcatc cagcccgagc gggtggagat gcaggtagga ctgaccccgg cggtcgagtc
    14461 cgggctcgac cgggcggccg agctggccct cgccacgttg gagcgctggg gccatcgggc
    14521 cgtgcgggag aatggtgtcg ccatctatgc atgagctgag tgtcgcgatg gagatctgcc
    14581 ggatcgcgga ggagcgcctg gaacctcacc ggcgctcttc gcttcggcgg gtcggcgtcc
    14641 tggtgggcac tgacgccggc atcgaaccct cgaatctcga gttctgtctc gaagcgctgc
    14701 tcagccagcc gccgttcggt caggcggttc ccatcattca acacactgcg gggcacgacc
    14761 tcgcgctcgc ctttctccag gtggatgatg cctgtccgga cgattgaggt tcgtgagcgg
    14821 gtgatggcca agaacgacga gctggcggcc gaggtgcggc gccggctggc cgaggcgggg
    14881 accgtcgcct tcaacctggt gtcgagcccg gggtcgggaa agaccctcct gttggagaag
    14941 accctggccc ggttgggacc cgagttgccc atggcggtgg tgaccggtga cgtccagacc
    15001 cagaacgacg ccgatcggct ggctcggcat accgatcgcc tggtgcaggc ggtggttacc
    15061 ggcggcgcct gccatctcga ttcccgccag gtcatgcagg cgctggacgc catcgatctg
    15121 gccgagaccc gcctgctctt catcgagaac gtgggcaacc tggtgtgtcc cgcggcgtgg
    15181 gacctgggcg aagccgcgaa gatcgtggtg ctgtccgtca ctgaaggtga ggacaagccg
    15241 ctcaagtacc cccgcatgtt ccgcgaggcg cgctgggccg tgctcaacaa gatcgacctg
    15301 ttgccgtacg tgccattcga tgtggactgg gcgctcgcct gcgcccggca ggtcaacccc
    15361 agtctcgagt tcttcctcac gtcagcccac accggagaag ggctcgacca atggttcgac
    15421 tttcttcgac gccaggtggc gcagccggcg gcagtgtgac cggtcgggtg ctgctcgcgg
    15481 ccagccggtg cttcgtcacc ggtgtggtac agggggtcgg gttccggccc ttcgtccacc
    15541 ggctcgcgct caagcacgag ctgcatggct gggtgcggaa tgacgccggc gaagtcgtga
    15601 tcgtggtgga gggcgcgccc gacgcgatca cgcggtttct ggcggcgctc gaggccgagg
    15661 cgccgccgct ggcccggatc gagcgagtgg aggccatcga cgcggcgccg gagggtctgg
    15721 cacgcttcga ggttctcgcc agcgcggcgg tcgatcagac tcggcggcag ccgctgccgg
    15781 ccgacgtcgc cctgtgtccc cagtgtctgg ccgacctgat ggacccggcc aaccggcggt
    15841 atcgctaccc gttcatcact tgcaccgact gcgggccgcg cttcacggtg atcgaccagc
    15901 tgccctacca gcgcgaccgc acctcgatgg gcgcgttcgc gcagtgtgac gagtgcctgc
    15961 gcgagttcca gtcgcccgag gatcgtcgct tccactcgga gaccaatagt tgtcccgcgt
    16021 gcgggccgac gctctggctg gaactagggt cgaagccggt cgaaccgggt cgaagggagt
    16081 cgaaggcggt cgatgggggt cgaagagggt cgaagcgggt caccggcaat tacgaggtgg
    16141 tgctgcggac ctcggccggg ctgctgcaga gcggcgagat cctggcaatc cggggtctgg
    16201 gaggattcca tctcgcggtc gatgcgacga accggcaggc ggtcgagcgg ctccgggccc
    16261 gcaaacggcg ggaggccaag ccgctggccg tgatggtccg gtcggtgacc gaggccgccg
    16321 ccgtggcgct ggtcggtccc cgcgaggaag ctctcctgct cgctcccgag cgtcccatcg
    16381 tgttgttgcc ggcgaggccg ggcgccgtgg ccgcggcggt gcaccccggc ctcgatcaga
    16441 tcggggtgat gctcgcctat accccgctgc acgtcctgct gctggagctc accggccggc
    16501 ccctggtcat gaccagcggc aacctgtcgg aggagccgat cgcggccggg ttaccggagg
    16561 cccgcgaccg gctgggttcc atcgccgacg ggttcctgat gcacgatcgc gagatccgga
    16621 ctcgctgcga cgactcggtg gtgcgaccgg tcggtgaaca catcattatg atccggcggg
    16681 cccgcggcta cgcgccgctg ccgctgcggc tgccgctcga gagcccggtt ccgctgctcg
    16741 cggtcggtcc ccaccagaag aacaccgcga cgctggtgca cggcaacgtg gcctacatca
    16801 ctccccacgt cggcgatctg gaaaacctgg agacgctgga ccagttccag catttgaccc
    16861 ggtcgtatca gcggctgttc cacgttgagc ccgaggtggt cgcgcatgat ctccaccccg
    16921 gatacctctc cacccggatc gcgcaggact cggggctccc cgtcatcggg gtccagcatc
    16981 accacgccca tatcgccgcg gtggccgccg agcatgggat cacgggcagc gtcgtcggac
    17041 tcgcgttcga tggcacggga tacggagatg atggcatggt gtggggcgcg gaaatcctgc
    17101 tggccgacct gtgcgggtat gagcgcgtgg cccaccttcg gtacgctccc ctgccggggg
    17161 gagacctcgc ctcccgggcc ccctggcgtg ccgcgctcgg ctacctgagc ctcgaacccg
    17221 agcgtgccag gtccttcgag cgggctttcg ccgaggtccc ctccctggag ttggccctgg
    17281 cccgaaccca gatccagcgc aagctcaacg ccccgcgggc ttcctccatg ggccggttgt
    17341 tcgatgcggc ggccgcggtg ttaggcgtgc gcgccaccac cggctacgaa ggccaggccg
    17401 cgatggagct ggaggcgctc gccgcccggc atgatgccgg aaagctgctg ccgttcccgg
    17461 tgcgagagac cgagagtggg ttcctgctcg acccagtacc gctgcttggc gccctgggcg
    17521 aaatgcggaa ccgcggtgcc ggcatcagcg ccctggcggc cgacttccac gccagcgtgg
    17581 ccgcggcggc ggtgcgggtg gcccgctggg cggccgccct gggtggagtc gatacggtgg
    17641 cgttaggcgg gggaaccttt cagaacgtcc ggctcctgac cctgattcgc gacggcttgc
    17701 ggcaggcccg gttgcgggtg ctgacgcccg agaggctgag tcccaacgac ggggcgatca
    17761 gctacgggca ggcggcagtg gccgcagcca ggctgaacca ataggactta ggattaagga
    17821 ctacgcaaca gcttttgagc cacggtctcg ggaccaggaa gccacctagt cctcagtcct
    17881 aagtccttgg tcctgtagtg cgaactcaac cgaggtagga accatgtgtt tgggcatccc
    17941 cggccggatc agcgacatgc gcaccgatga agggctcgcc atgggtgtgg tcgactttgg
    18001 cgggatccgg cgcgacgtct gtctcgagta cgtggccgac caggtgaagc cgggggacta
    18061 tgtcgtggtg cacgtcggct tcgccatctc ccgggtggac gaagacgaag cccgcaagac
    18121 gttccaggcc ctcaaggcca tgagccagct tgatgagctg gaatggatgg atgaagtggc
    18181 cgatcggtcg ctgggaggga tgacgccatg aagtatctcg aggagtaccg cgaccccggc
    18241 attgcccgcg ggctggtcga gcagatcctg agtaccgcca cccggcgctg gaccctgatg
    18301 gaagtctgcg gtggccagac ccacaccatc gtgcggcagg gtctggatga gctgctcgcc
    18361 cccgcggtcg agatgatcca cgggcccggc tgcccggtct gcgtgacgcc gctggaacag
    18421 atcgacaagg ccatggccct ggcggcccgg cccgacgtga tcttcagctc cttcggcgac
    18481 atgctgcggg tccccggcag cgactgcgac ctgctccaga tccgggcccg cggcgggaac
    18541 gtcaaggtgg tctactcgcc gctcgatgcg ctcgagctgg cccggaagaa ccccgataag
    18601 caggtcgtgt tcttcgcggt gggcttcgag accaccgcgc cggccaacgc catggcggtc
    18661 tggcgggccc agcaactcgg catcccgaac ttcagcgtgc tggtctcgca tgtgatcgtg
    18721 cctccggcca tgaccgccat tctctcctcg tccagcaacc gggtccaggg attcctggcg
    18781 gcaggccacg tgtgcaccgt catgggctgg accgagtacg agcccatcgc gaaacagtac
    18841 cgggtcccga tcatcgtcac cggcttcgag ccgctcgaca tcctggaagg catctggatg
    18901 gccgtgaagc agctccagga aggtcgccac gaggtcgaga accagtatgt ccgctcggtc
    18961 aagcgcgacg gcacggtgcc ggcgcgggag ttggtggatc gggtcttccg ggtcgtcaat
    19021 cgcaaatggc gcgggctggg cgagatcccg ctctcaggac tgggcctgcg ggaggaattc
    19081 gccgacttcg acgccgagct gcggtttggg ctgagcgaca tggcggtgga ggagccggcc
    19141 gagtgtcggg ccggagaggt gttgcagggg attctcaagc cgcaccggtg cccggccttc
    19201 ggcgtcaggt gcacgcccga gaatccgctg ggtgctccca tggtgtcctc ggaaggagcc
    19261 tgcgccgcct attacaactt cggccggctc cggaagacca cggaggtcgc atgaccacca
    19321 tcgatatcgg cgaacgcgcc ctggtgtgcc cgaccccggg tcggatcgcc gaccgggtcc
    19381 agctgggtca cgggtcgggc ggaaagctcg ccgcgcagct gctcaaggag cggtttcttc
    19441 cccatttcag aaacgacgtg ctggagcagt tgggcgatgc ggcggtgatt gcgctgggcg
    19501 gcgtggagct tgccatgtcg accgacacct tcgtggtgag cccggtggag tttcccgggg
    19561 ggaacatcgg atcactcgcg gtccatggta ccctcaacga tctggcgatg atgggcgccc
    19621 gcccggccta cctctcggcc gggttcgtgc tggaagaagg gttggagctg gccctgctcg
    19681 atcgggtggt caaggccatg gcaaatgccg ctgccgccgc cgccgtgccg ctggtgacgg
    19741 gagacaccaa ggtggtcgag cgcggaaagg ccgacggatt gttcatcaat accaccggta
    19801 tcggcacgct cgatcccggc ttccgtcccg cgccccaacg cgcccaggtg ggagacgcga
    19861 tcattgtgtc gggccccatc ggctgtcacg gaatggccat catggctgcc cgcgaaggac
    19921 tgggacttgc caccgagctg gagagcgaca gcgcgacact ctggccgctg gtcgagcgcc
    19981 tgaaggccag cgtcggcggc caggtccacg ttctgcggga tcctacccgc ggcggggtag
    20041 ccacggcgct caacgagatc gcgcaggcgg ctgacgtcgg tttccggctg ggcgagactc
    20101 ggctgccggt cccgcccaca gtccggggcg cgtgcgaaat gctgggactg gacccgctgt
    20161 acgtcgccaa cgaggggatc ctgctggcga tcgtcgcggc tacggtcgcg cccgcggcgt
    20221 tgaaggcgtt gcgcagccat ccgctgggcg ccgaagcccg agtcatcggt gaggcgatcg
    20281 gggatcatcc tggcatggtc accatgcgca cgttcatggg aggcactcgg gtcgtggaca
    20341 tgctgccggg agatcagctc ccccgaatct gctgactctg gtcccccgct tcggccttcc
    20401 ggccgggtgg attttccgct tgccgctgtc gaggctggcc gctagactcc gcccccatgt
    20461 ccagggtcac tatcgacgca ttggcggcgc acgcggggca gcgcgtcacc gtcaacggct
    20521 gggtgcagac cacccgttcc agcgggaagg tcgcctttgc ggttttgcgc gatggcaccg
    20581 gttacctcca gtgcgtggtg gtgaagaacc aggtagcgcc ggaagtctgg gagcagtttg
    20641 gccggctcac ccaggaagcc agcgtggcgg tcgccggcga tgtccggccc gagccgcggg
    20701 cgccgggcgg gttcgagctg ggactctccg acctgactct tctgggcgaa agcacggagt
    20761 tcccgatcgg tcccaaggag catgggacca ccttcctgtt cgagcaccgt cacctgtggc
    20821 tgcggagcaa gcggcaggtc gcgatcgcga agctgcgaca cgaagtggtg c
//
LOCUS       DASWKS010000518         5361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1024172, whole genome shotgun sequence.
ACCESSION   DASWKS010000518 DASWKS010000000
VERSION     DASWKS010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5361
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024172"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..773)
                     /locus_tag="VGA78_14850"
     CDS             complement(9..773)
                     /locus_tag="VGA78_14850"
                     /inference="COORDINATES: protein motif:HMM:NF045274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895208.1"
                     /translation="MALVACCLLGPGLRAQDGPGRMAEGIAAMKALDPRGAADAFETI
                     LAGDSLQVEANWRAALALIDIGKQVREADRNPTRDSLYRLAERYARRGVTLAPDSAAT
                     HFALALALGRSALTKGKKERIRSALEIRNEARRALDLNPDHDGAWHVLGRWHAEIERL
                     SNLEEFFARKFLGGEVFGEASFAEAVRCMERAVELRGDFIYHRLDLAEVYVELKRWDD
                     ARAQLRVVPGLPAQDVMDHVYRARADVLLHKIRNKL"
     gene            829..2151
                     /locus_tag="VGA78_14855"
     CDS             829..2151
                     /locus_tag="VGA78_14855"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006206 - pyrimidine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HEX9895209.1"
                     /translation="MMIPRLIERKRDGHALEPGEWRELIGAYVASRVPDYQMAAMAMA
                     VVFQGLTPDELNELVDAMLTSGDRLEFTGYPMARVDKHSIGGVGDKTSLLLAPLIACC
                     GLAVPMISGRGLGHTGGTLDKLESIAGFRTGLSLAEARSQLDRLGVVMLGQTPELVPA
                     DRKLYALRDVTGTVESVPLIAASIMSKKLAEDLTGLVLDIKTGSGAFITDPVQSRRLA
                     ETMIAIGEAHGCRTIGLLTAMDRPLGFACGNALEAAEAIAGLKGDGPADLMEVTYALG
                     VEMLRVGRGEAGGGRRELENLIESGRALQKFREMVEAQGGDPRVVDDPARLPRAPVQR
                     PLRSPEDGTVVRIEPRAVGHAIIRLGGGRAKADDVVDPAVGFVIPVKPGQRVGRGQLL
                     ATVHARDDASAEAALQSLRKAIHLGERANPWPLVSHRISKAGVEELSS"
     gene            complement(2179..4101)
                     /gene="gyrB"
                     /locus_tag="VGA78_14860"
     CDS             complement(2179..4101)
                     /gene="gyrB"
                     /locus_tag="VGA78_14860"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002506219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEX9895210.1"
                     /translation="MAQPNVPKDNGNYDAQSITVLKGLDAVRKRPAMYIGSTGENGLH
                     HLVYEVVDNSIDEALAGYCDMVAVTIHEDNSVTVTDNGRGIPVDVHPTEKMPGVELAL
                     TVLHAGGKFDKSSYKVSGGLHGVGVSVVNALSQSLKVWVDRDGKRHHMAFARGKTTRK
                     LEVEGKARGTGTTVWFKPDAEIFTVLEFSWTTLADRLRQLAYLNKGVKITLKDEREKP
                     QEETFLAKGGLVEFVQWLVRNKKTLHPKPIAFCAVKDDVEVDVALQYEDGYNENTFTF
                     VNNINTHEGGTHLTGFKSALTRTVNAIANDLGTLKKENFSLSGEDIREGLTCVLHVKV
                     KEPQFEGQTKTKLGNSEVEGIVKQVINEYLSSYLQEHPGVARNIIEKAVSAAQAREAA
                     RKARDLVRKKSGLENAVLPGKLADCSLDDPVLCEIYLVEGDSAGGTAKQGRDRSFQAI
                     LPLRGKILNVERARIDKILGNEEIRAMITAIGAGVREDFKLENARYHKIILMTDADVD
                     GAHIRTLLLTFFFRQMPALIDQGYVYIAQPPLYRVSKGKEEFYAYTEQERDDYQKRLG
                     GNGVYIQRYKGLGEMNKDQLWKTTMDPSTRTVLRVTLEDAVEASKLFDELMGDEVEPR
                     RLFIEANAKYVSNLDV"
     gene            complement(4121..4462)
                     /locus_tag="VGA78_14865"
     CDS             complement(4121..4462)
                     /locus_tag="VGA78_14865"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEX9895211.1"
                     /translation="MSRRPLGRADGKPRSPVRLGDALKEYTANAGIARRLDLARAVED
                     WADRVGPQVASVTRAESVTPDGILRVRVPSAAWANELSLMAPRILAKLNDGRRGRIRE
                     LRFIAGPLDRP"
     gene            complement(4459..>5361)
                     /gene="recF"
                     /locus_tag="VGA78_14870"
     CDS             complement(4459..>5361)
                     /gene="recF"
                     /locus_tag="VGA78_14870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00611.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HEX9895212.1"
                     /translation="CRWEGPGFSVGLGVEGGEVLDLEAQFSRATRKRRLSLDGAETIR
                     LADAVGRWLAVAFLPTDLRLVQGPAAERRGYLDRVLSLADPAYFRALIRYRAALAQRN
                     AALRQGRSSLATSFDGLLAGPGALITRERMRWIEFSATHFARECAALGEGEPVHLSYR
                     GDESLASEAAWPAALAASGPRELLRGVTLVGPQRDDLVLEMRGHDLREFGSTGQQRTA
                     AIALKLCELATLAARRGTEPALLLDDVFAELDPARQAGLAERLRSATRQVFVTSPRKD
                     ELPDTLDLPLFEVRHGRVHAEVSV"
BASE COUNT          831 a         1852 c         1742 g          936 t
ORIGIN      
        1 ataaaccgct aaagcttgtt ccgaatcttg tggagcaaca cgtccgcccg ggcccgatac
       61 acgtgatcca tgacgtcctg agccggaagg cccgggacca ccctgagctg cgcccgggca
      121 tcgtcccagc gcttgagctc gacatagact tcggccagat cgagccgatg gtagatgaaa
      181 tcaccgcgca gctccaccgc ccgctccatg catcggaccg cctcggcaaa tgaggcttcg
      241 ccaaatacct caccgcccag gaattttctc gcgaaaaact cctccaggtt cgacagccgc
      301 tcgatctcgg catgccagcg gcccagcaca tgccaggctc catcgtggtc cggattgagg
      361 tccaacgccc ggcgcgcctc gttgcggatc tcgagcgcgg agcgaattcg ctccttcttt
      421 cctttggtga gggcggatcg gcccagcgcc agggccagcg cgaaatgagt ggcggccgaa
      481 tcgggagcca gggtgacgcc ccgtcgggcg tatcgctccg ccagccggta caaggagtcc
      541 cgagtggggt tccgatccgc ctcccggacc tgcttcccga tgtcgatcaa cgccaacgcg
      601 gcgcgccagt tggcctcgac ctgaagcgag tcgccggcca ggatggtctc gaaggcatcc
      661 gcggctccac gaggatcgag tgccttcatg gcggcgatcc cctcggccat ccgacccggt
      721 ccgtcctggg cccgaaggcc cgggccgagc aggcagcagg cgaccaaggc catccagcgt
      781 gaccgcccgc ccgcccgtcc gccggtccgt ctgccggtcc ttccgcccat gatgatcccc
      841 cgtctgatcg aacgtaaacg cgacggccac gccctcgaac ccggtgaatg gcgcgaactc
      901 atcggcgcct atgtcgccag ccgggttccg gactaccaga tggccgcgat ggccatggcc
      961 gtggtgttcc agggcctcac cccggacgag ctcaacgagc tggtcgatgc catgttgacg
     1021 tccggggacc ggctggaatt caccggctac cccatggcgc gggtcgacaa gcactccatc
     1081 ggcggtgtcg gcgacaagac gtcgctgctg ctggcgcccc tgatcgcctg ctgcggcctg
     1141 gcggtgccga tgatttcggg ccgcggcctg ggccataccg gcggcaccct cgacaagctc
     1201 gaatccatcg ccggcttccg gacaggattg tccctggccg aagcgcgaag ccaactcgac
     1261 cggctgggtg tggtcatgct gggacagacc ccggagctgg tgcccgccga ccgcaagctc
     1321 tacgccctgc gtgacgtcac cgggacggtc gagtccgtcc cgttgatcgc cgccagcatc
     1381 atgtccaaga agctggccga ggatctgacc ggtttggtgc tggacatcaa gaccggcagc
     1441 ggcgcattca tcaccgaccc ggtgcagtct cgccgattgg cggagaccat gatcgcgatt
     1501 ggcgaagccc atggctgccg caccatcggt ctgcttaccg cgatggaccg tccgctgggc
     1561 tttgcctgcg gcaatgcgct ggaggcggcc gaggccatcg ccggcctcaa gggggacggg
     1621 ccggccgacc tcatggaggt gacctacgcg ctcggggtgg agatgcttcg agtcgggaga
     1681 ggggaggcgg ggggcgggag acgggagcta gagaatctga tcgagtcggg acgtgcgctc
     1741 cagaagttcc gggagatggt cgaggcgcaa ggaggcgatc cccgcgtggt tgacgatccg
     1801 gcccggttac cgcgggcccc ggtccagcgt ccgctgcgga gtcccgaaga tggaaccgtg
     1861 gtccggatcg agccgcgcgc cgtcggtcac gcgatcatcc gtctgggggg cggcagggcc
     1921 aaggcggatg acgtggtcga tccggccgtg ggcttcgtga tcccggtcaa gccgggccag
     1981 cgggtgggtc gaggacagtt gctcgccacg gtgcacgccc gggatgacgc cagtgccgag
     2041 gccgcgctgc aatccctgcg gaaggccatc cacctgggcg agcgggccaa cccctggccg
     2101 ctggtgagcc accggatttc caaggcggga gtggaagagc tctctagttg accgcccgcc
     2161 cgcctgcccg cccgtccgtc agacatccaa attggagacg tacttcgcat tcgcctcgat
     2221 gaacaggcgg cgcggctcca cctcgtcgcc catcagctcg tcgaacagct tgctggcctc
     2281 caccgcgtct tccagggtca cccgcagcac ggtgcgggtg ctgggatcca tggtggtctt
     2341 ccacaactgg tccttgttca tctcacccag gcccttgtag cgctggatgt agacgccgtt
     2401 cccgcccagc cgcttctgat aatcgtcccg ttcctgctcg gtgtaggcgt agaactcttc
     2461 cttgcctttg gacacccggt agagcggcgg ctgggcgatg tacacgtagc cctggtcgat
     2521 cagcgccggc atctgccgga agaagaaggt cagcagcagg gtccggatgt gggccccgtc
     2581 gacgtcggcg tccgtcatca ggatgatctt gtggtagcgg gcgttctcca gcttgaagtc
     2641 ctcccgcacc ccggccccga tcgcggtgat catcgcccgg atctcctcgt tgcccaggat
     2701 cttgtcgatc cgggcccgct ccacattcag gatcttgccg cggagcggca ggatggcctg
     2761 gaaggaacgg tcgcggccct gcttggcggt gccgccagcc gagtcaccct ccaccaggta
     2821 gatctcgcac agcaccggat cgtccagcga acagtcggcc agcttgccgg gcagcaccgc
     2881 gttctccagg ccgctcttct tgcgcaccag gtcgcgggcc ttgcgggccg cctcgcgggc
     2941 ctgggctgcg ctcacggcct tctcgatgat gttgcgcgcg actccggggt gctcctgcag
     3001 gtagctcgac aggtactcgt tgatgacctg cttgacgatc ccttcgactt cggagttgcc
     3061 cagcttggtc ttggtctgtc cctcgaactg gggctccttc accttgacgt gcagcacgca
     3121 ggtgaggcct tcgcggatgt cttcgccgct gagcgagaag ttctccttct tgagggtgcc
     3181 caggtcgttg gcgatcgcat tcaccgtccg ggtgagcgcc gacttgaatc cggtgaggtg
     3241 ggtaccgccc tcatgggtat tgatgttgtt gacgaaggtg aacgtgttct cgttgtagcc
     3301 gtcctcgtac tgcagcgcca catccacctc tacgtcatcc ttcacggcgc agaaggcgat
     3361 cggcttggga tggagcgtct tcttgttccg gaccagccac tgcacgaact ccaccagccc
     3421 gcccttggcg aggaaggtct cttcctgcgg cttctcgcgc tcgtccttga gcgtgatctt
     3481 cacgcccttg ttgaggtagg ccagctgccg cagccggtcg gccagcgtgg tccagctgaa
     3541 ctccagcacg gtgaagatct cggcgtcggg cttgaaccag accgtcgtcc cggtcccgcg
     3601 ggccttcccc tccacctcga gcttgcgggt ggtcttgccc cgggcgaacg ccatgtgatg
     3661 gcgcttgccg tcgcggtcga cccacacttt gaggctctgt gacagagcgt tcaccaccga
     3721 cacgcccacg ccgtggagcc cccccgagac cttgtagctc gacttgtcga acttgccgcc
     3781 ggcatgcagc accgtcagtg ccaactcgac gccgggcatc ttttcggtcg ggtgaacgtc
     3841 caccgggatg ccccggccgt tgtcggtcac cgtgacggaa ttgtcctcgt gaatggtcac
     3901 ggccaccatg tcgcagtagc ccgccagcgc ctcgtcgatc gagttgtcga cgacttcgta
     3961 gacgaggtgg tggagcccgt tctcgccggt cgacccgatg tacatcgcgg gccgtttgcg
     4021 gaccgcgtcg agtcctttga ggacggtgat ggactgggcg tcgtagttgc cgttgtcctt
     4081 gggaacgttc ggctgcgcca tgctcacctt cttttggggg tcagggccgg tccagcggac
     4141 cggcgatgaa ccggagctcg cggatgcgtc cccggcgacc gtcgttgagc ttcgccagga
     4201 tccgcggcgc catcagactc aattcgttgg cccaggccgc gctgggcacc cgcactcgga
     4261 gaatgccgtc gggtgtcacc gactcggccc gtgtgaccga ggcgacttgg gggccgaccc
     4321 ggtcggccca atcctccacc gcgcgcgcca gatccagccg ccgcgcgatc cccgcgttgg
     4381 cggtgtactc cttgagcgca tcgcccagcc gcactggaga ccgcggcttg ccatcggccc
     4441 gcccgagagg acggcggctc ataccgagac ctccgcgtga acccggccat gacgaacctc
     4501 gaacagcggc agatccagcg tgtcgggcag ctcgtccttg cggggcgagg tcacgaacac
     4561 ctgccgggtg gcactccgca gccgttcagc cagcccggcc tgtcgggccg gatccagttc
     4621 ggcgaacaca tcatcgagca gcagggccgg ttcggtgccc cgccgcgctg ccagcgtcgc
     4681 cagctcgcac agcttgagcg cgatcgccgc ggtgcgttgc tgtccagtcg agccgaactc
     4741 ccgcaggtca tggcctcgca tttccagcac caggtcgtcc cgctgaggtc ccaccagggt
     4801 cacaccccgg agcagttccc gcggcccgct ggcggcgagg gctgccggcc aggccgcctc
     4861 gctggccagg gattcgtctc cccgatagct caggtggacc ggctcccctt cgcccagggc
     4921 cgcgcattcg cgggcgaagt gagtggcgct gaattcgatc caccgcatcc gctcacgtgt
     4981 gatcagggcg cccggtccgg ccaggagccc atcgaaactg gtggccaggc tggatcggcc
     5041 ctggcggagc gcggcgttgc gctgagcgag cgctgcccga taccggatca gcgcccggaa
     5101 gtaggccggg tcggccaacg acagcacccg atcgaggtac ccgcgccgtt cggcggccgg
     5161 gccctgcacc agccgcaggt cggtgggcag gaacgccacc gcgagccagc gccccaccgc
     5221 atcggccaac cgaatggtct cggccccgtc gagtgacagt ctccgttttc tggtggcccg
     5281 ggaaaactgc gcttccagat cgagcacctc accgccctca acgcccaaac cgaccgagaa
     5341 gcccggccct tcccagcgac a
//
LOCUS       DASWKS010000519         1561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2875474, whole genome shotgun sequence.
ACCESSION   DASWKS010000519 DASWKS010000000
VERSION     DASWKS010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2875474"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VGA78_14875"
     CDS             complement(<1..475)
                     /locus_tag="VGA78_14875"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF014182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX9895213.1"
                     /translation="MKPPATFQDVILQLQHFWAEHGCLLWQPYYSQLGAGTMNPATFL
                     RVLGPEPWRVAYVEPSVRPDDGRYGENPNRMQQHYQFQVILKPDPGNPQEIYLESLRR
                     IGIDPAVHDVRFVEDNWESPALGAWGLGWEVWLDGLEITQYTYFQQAGGQALDPVS"
     gene            complement(472..1311)
                     /gene="recO"
                     /locus_tag="VGA78_14880"
     CDS             complement(472..1311)
                     /gene="recO"
                     /locus_tag="VGA78_14880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEX9895214.1"
                     /translation="MPPRERVYRTEAIVLRRRDLGEADRILSVFSLDRGKLRLVAKGV
                     RRPGSRKAGHLEPFTRVQLLVARGRDLDLITQAEALEPHAALRSDLIRLGHAAYAVEL
                     LDRFTVEEGGHRLLYHLLRETLERLAGGASPAVALRFYELHLLEGAGFRPELERCVAG
                     RERILAEDQFFSVEEGGVLCPRCGPGRPGARPISMAALKVLRHLQRSDWQAVEGLALR
                     PPVLAEVERVMEAHLTYLLERRLNAPDFLRRVRLLLQGAAGEWSSLAEPVADAPGAEA
                     APA"
BASE COUNT          285 a          529 c          537 g          210 t
ORIGIN      
        1 ccgagaccgg atcgagcgcc tggccgcccg cctgctggaa gtacgtgtac tgggtgatct
       61 cgagcccgtc cagccagacc tcccagccca ggccccacgc gcccagggcg ggcgattccc
      121 agttgtcctc cacgaagcgg acgtcatgga cggcgggatc gattccgatc cggcgcaacg
      181 attccagata gatctcctgc ggatttcccg gatccggctt gaggatcacc tggaactgat
      241 agtgctgctg catccgattc gggttctccc cgtatcgtcc gtcgtcgggt cgcaccgaag
      301 gctcgacata cgcaacacgc cagggctcgg gcccgagcac gcgcaggaac gtggccgggt
      361 tcatcgtccc cgcccccagc tgcgagtaat acggttgcca gaggaggcaa ccgtgttccg
      421 cccagaagtg ctggagctgg aggatgacgt cctgaaacgt cgcagggggc ttcacgccgg
      481 cgccgcctca gcgcccgggg catccgcaac cggctccgcc agcgacgacc actccccggc
      541 cgcgccctgc agcagaagac ggacgcgacg caggaaatcg ggagcattca gacggcgctc
      601 gagcagatac gtgagatgag cctccatcac ccgctcgacc tccgccagca ccggcggccg
      661 cagcgccagc ccctccaccg cctgccaatc cgaacgctgg aggtgtcgca agaccttcag
      721 ggccgccatt gagatcgggc gggcgccggg ccggccgggg ccgcagcgcg gacagagcac
      781 gccgccctcc tccaccgaaa agaactgatc ctcggccagg atcctctccc gaccggcgac
      841 gcaccgctcg agctccggcc ggaaaccggc gccttccaga aggtgcagct catagaaacg
      901 cagggcgacc gccggggagg cgcctcccgc caaccgctcg agcgtctctc ggagcaggtg
      961 gtacaggaga cggtggccgc cctcttcgac ggtgaaccgg tccagcagct cgacggcgta
     1021 cgcggcatgg cccaaccgga tcagatcgga ccggagggcg gcgtgcggct cgagcgcttc
     1081 cgcctgcgtg atcagatcga gatcccgccc gcgcgccacg aggagctgga cgcgggtgaa
     1141 cggttcgaga tggcccgcct tgcgcgaacc ggggcgccgc acgcccttgg ccaccaggcg
     1201 cagcttcccg cgatcgaggc tgaagacgga gaggattcga tctgcctccc cgagatcgcg
     1261 ccgccgcagc acaatcgcct cggtccggta gacgcgttct ctcgggggca tggagggatt
     1321 atacctagga gagtggttgg tggtgagtgg acggtggtca gaggtggagg gtgaaggttc
     1381 gatcagtcga cctggagcgg caagctgagc gcgggcagcg gagcggatag ccgcaaaccg
     1441 gaaactgaaa ggtgggcaca ggacgccggg gtgagagggc agccccccgt cgagggtcat
     1501 tccgagcctc ggaacgatgc gaaggggcga ggagccctcg gctggacacg cgggaggcca
     1561 c
//
LOCUS       DASWKS010000520         3526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2875949, whole genome shotgun sequence.
ACCESSION   DASWKS010000520 DASWKS010000000
VERSION     DASWKS010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2875949"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VGA78_14885"
     CDS             <1..400
                     /locus_tag="VGA78_14885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895215.1"
                     /translation="GNEFAAFSPAIIFSPVGGNQLDQLFQVAGQPTPALVRGFGIVFS
                     DVDLADRTTIELFAQDGSSLGTLIAPIRSDSAGLSFVGATFADAIIARARITLGTGAL
                     GANVNDVSARGTADLVVLDNIIYGEPRKAF"
     gene            447..1574
                     /locus_tag="VGA78_14890"
     CDS             447..1574
                     /locus_tag="VGA78_14890"
                     /inference="COORDINATES: protein motif:HMM:NF024818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX9895216.1"
                     /translation="MSPTAGLENERLLELFFSQSLDGFFIMMLEEPVEWGDHVDKDEV
                     MDFVFEHERVTKVNPAIVTQFNASSPHELLGMTPGRMFAHDPAAAKTRWRGFFDRGRL
                     HNETDERRLDGTPMRIEGDYMVIYDDRGRIAGHFGIQRDVTERHRAQEEIRTSREQLR
                     ALAARLQRVREEERTGIAREIHDELGQALTGLRLDISWMKDRVAMDHAVRAQCASIIE
                     RIDGTLGAVRRIATALRPSILDQLGLAAALEWQGQEFGARTGIEVVMEVCADGCEIPD
                     DLGSSAFRILQESLTNVARHSKARRVTIRLIQTSELLTLEVSDDGVGIRPEQLEGTAS
                     LGLIGMRERAVACGGELRIAGQPKLGTTVSLKVPLGAGNTR"
     gene            1571..2203
                     /locus_tag="VGA78_14895"
     CDS             1571..2203
                     /locus_tag="VGA78_14895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9895217.1"
                     /translation="MIRIAIADDHPIVREGLRRIASEGAGISVTGEAASAAELLRLLS
                     VAAVDVVLLDVSMPGSTLVETLKELRDRHPSARVLVLSVHPEDQWAVRALRAGAAGYL
                     TKDHSPEQLVEAIRRVARGGKYVSAALAEKLADLVDPGTTRAPHERLSDREFEVLRAL
                     GSGMAIKEVAQQLNLSSKTISTYRSRLLEKMGLKSRADLVRYVVEHELLK"
     gene            complement(2307..2903)
                     /locus_tag="VGA78_14900"
     CDS             complement(2307..2903)
                     /locus_tag="VGA78_14900"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HEX9895218.1"
                     /translation="MSFYFLGERLVVDLLNTVIAPDGRVQDLLGTREELAAWARASGL
                     AQPGELRSSSPRLRREPGTLRIFREQLRRGLLAWAASGRPSRTLVTRLNRELGRGQER
                     MEIGVRQGRAVIRRRAQGSPLDRLYAAVARSGAELLASGAPRRLRKCANPSCRLMFYD
                     VSKAGRRRWCSMRMCGARSKVRAWYLRRRRDPRARTGR"
     gene            2997..>3526
                     /locus_tag="VGA78_14905"
     CDS             2997..>3526
                     /locus_tag="VGA78_14905"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9895219.1"
                     /translation="MPHFVQYTIANAPGRSRPLLQQVDQALGFIPNLYATFAESPALL
                     EGALGLDAGLDQGLLSPVERQLVKIAVSTENGCSYCVAAHSTIAGILRARPEVVAAVR
                     TGAPVPDHKIDSLISFTRAVVRHKGFVPEEVAGFLAVGYSKAHVLEVVGHVAAKTLAN
                     YIHALTAAPLDAAFQP"
BASE COUNT          604 a         1173 c         1170 g          579 t
ORIGIN      
        1 cgggaatgaa ttcgccgcgt tcagtcccgc tatcatcttc tcgcccgtcg gcggcaatca
       61 gctcgaccag ctcttccagg tcgccggcca gccgacaccg gcgctcgtcc gcggcttcgg
      121 gatcgtattc agcgatgtgg atctggcgga ccggaccacg atagagctgt tcgcccagga
      181 tggttccagc ctcggcaccc tgatcgcacc gatccggtcc gactcggcgg gcctgtcctt
      241 tgtcggggcc accttcgccg acgcgatcat cgcccgggcc cggattacgc tcggcaccgg
      301 cgcgctgggc gccaacgtca acgacgtctc cgcgcgcggc acggcggacc tggtggtgct
      361 ggacaacatc atctacggag agcccagaaa ggccttctag tccaccgcca cggtatcttt
      421 cattctcccc ctggatggct tcgatcatgt ctcctacggc cggcctagag aatgaacgat
      481 tgctggagct gttcttctcc cagtctctcg atgggttctt catcatgatg ctggaggaac
      541 cggtggagtg gggagatcat gtcgacaagg atgaggtgat ggacttcgtg ttcgagcatg
      601 agcgggtcac caaggtcaac cccgctatcg tcacccagtt caacgcctca tcgcctcacg
      661 aactgctcgg gatgacgccg gggcggatgt ttgcgcacga cccggccgcg gccaagaccc
      721 gctggcgcgg gttcttcgac cggggccggt tacataacga aaccgacgag cggcgcctgg
      781 acggaacccc catgcggatc gagggggatt acatggtgat ctacgatgac cgggggcgca
      841 tcgccggtca cttcggcatc cagcgggacg tgaccgagcg gcatcgagcc caggaagaga
      901 tccggacctc ccgggagcag ctccgggccc tggcggcccg tctccagcgg gtgcgcgagg
      961 aggaacgaac cggcattgcc cgggaaatcc atgacgagct ggggcaggcg ctgaccggcc
     1021 tgcggctgga catctcgtgg atgaaggacc gggtcgccat ggatcacgcg gttcgagccc
     1081 aatgcgcttc gatcatcgag cgaatcgacg ggacgcttgg tgccgtgcgc cggatcgcca
     1141 ccgcgctccg gccgagcatc ctggatcaac tgggactcgc ggccgcactc gagtggcaag
     1201 gacaggagtt cggggcccgg accgggatcg aggtcgtcat ggaggtgtgt gccgatggct
     1261 gtgagattcc ggatgacctg ggcagctccg cattccggat tcttcaggag tcgctcacca
     1321 acgtggcacg ccactcgaag gcccggcgcg tgacgattcg cctcattcag acgagtgagc
     1381 tgcttacact cgaggtgtcg gacgacggcg tcggcattcg gccggagcag ctggagggga
     1441 cggcgtcgct gggactcatc gggatgagag agcgcgccgt ggcctgcggg ggcgaattgc
     1501 gcatcgccgg gcaaccgaag ctcggcacca ccgtgtcgct gaaggtcccc ctcggtgccg
     1561 gcaacacgcg atgatccgga tcgccattgc cgacgaccac ccgatcgtcc gggagggcct
     1621 ccgccgaatc gcgagtgagg gagcggggat atcggtgaca ggagaggccg cgagcgcggc
     1681 ggagctgctc cgtctgctct ccgtagctgc cgtggacgtc gtgctgctcg atgtaagcat
     1741 gcccggctca accctggtag agacactcaa ggagctgagg gatcggcacc ccagcgccag
     1801 ggtgctggtc ctgagtgttc acccggagga tcaatgggcg gtgcgagcct tacgggccgg
     1861 cgccgcggga tacctgacca aggatcactc gcccgagcag ctggtcgaag ccattcgccg
     1921 ggtggcgcgg ggcggtaagt acgtgagcgc ggctctggcc gagaaactgg ccgatctggt
     1981 ggaccccggt accacccggg cgccccacga acgactgagc gatcgggaat tcgaagtact
     2041 tcgggcgctc ggcagcggga tggcgatcaa ggaagtggcc cagcagctca atctcagctc
     2101 caagacgatc agtacgtacc gctcccggtt gttggaaaag atgggcttga agtcgcgggc
     2161 cgatctggtg cggtatgtcg tcgagcacga gcttctcaaa tgatcggccc ccggaacagc
     2221 atggccgccg cggccgccag ccggcgctga gcctctagca gctcgaccgg ccgacgtcgg
     2281 tgtcgccctg acggcggggc tcccgcttac ctgccagttc ttgctcgagg atcacgccgg
     2341 cggcgcagat accaggcgcg gactttcgag cgcgcgccac acatccgcat ggaacaccag
     2401 cggcgccgac ccgccttgga cacatcgtaa aacatgagcc ggcacgaggg gttagcgcat
     2461 ttgcgcaggc ggcggggagc gccgctcgcc agcagctctg ctcccgatcg ggccacggcg
     2521 gcgtacagcc gatcgagcgg gctgccctgc gccctgcgcc gaattaccgc ccggccctgc
     2581 ctaacaccga tctccattct ctcctggccg cgacccagct cccggttgag ccgggtgacc
     2641 aacgtccggc taggcctgcc gctggccgcc caggccagca gtccccggcg tagctgttcg
     2701 cgaaaaatgc gaagggtccc cggctcccgt ctcagcctgg gactgctgct cctcagttct
     2761 cccggctgcg ccagccccga cgcccgggcc caggcggcga gctcctccct ggtgccgagc
     2821 agatcctgga cccggccgtc cggggcaatc accgtgttca ggagatcgac caccaaccgc
     2881 tcgccgagga aatagaagct catggggaac cataccggta aaatatgtgt ttactggtaa
     2941 tccagccagg gcctgccgcc cgggccgact gcaacacccc ttaccgtgga gaggtcatgc
     3001 cgcactttgt ccagtatacc atcgccaacg cccccggacg ctcccggccc ctgctccagc
     3061 aggtggacca ggccctcggc ttcatcccca acctgtatgc cacgttcgcg gaatccccgg
     3121 cgttgctcga gggcgcgctc gggctcgatg ccggcctcga ccagggcctc ctgtcgccgg
     3181 tggagcgaca gctcgtcaag atcgcggtga gcaccgagaa cggctgcagc tattgtgtgg
     3241 cggcgcattc gaccattgcc gggatcctcc gggcgcggcc cgaggttgtc gcagcggtcc
     3301 gcaccggcgc gccggtgccg gatcacaaaa tcgacagcct catcagcttt acccgggccg
     3361 tggtgcgcca caaggggttc gtgcccgagg aggtcgccgg gttcctcgcg gttgggtaca
     3421 gcaaggcgca cgtactcgaa gtggtgggac acgtggccgc aaagaccctg gcgaactaca
     3481 tccatgcgct gacggcggcg ccgctcgacg cggccttcca gccgca
//
LOCUS       DASWKS010000521         5326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3241854, whole genome shotgun sequence.
ACCESSION   DASWKS010000521 DASWKS010000000
VERSION     DASWKS010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3241854"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VGA78_14910"
     CDS             <1..207
                     /locus_tag="VGA78_14910"
                     /inference="COORDINATES: protein motif:HMM:NF022577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEX9895220.1"
                     /translation="SRAMRQNVGRWDRVIRGIAGVLLLGLYGALQPPLRYFTLIGLML
                     IATALMGRCPLYTLLGISTCRRTV"
     gene            402..842
                     /locus_tag="VGA78_14915"
     CDS             402..842
                     /locus_tag="VGA78_14915"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX9895221.1"
                     /translation="MKLMKAAPMPALRREFDTMFERLFRSPLFPELPVLTAEAGWEPA
                     LDLTEAEKEFLVRLEVPGFHRENLDVKYESGVLTIAGTREFRTELKGEEFLWQERAEG
                     RFVRSIRIPAPVIEGEVVATYENGVLTVKLPKHQPTAKAKIAIK"
     gene            938..1465
                     /locus_tag="VGA78_14920"
     CDS             938..1465
                     /locus_tag="VGA78_14920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895222.1"
                     /translation="MRHGLLVLTAGALLAARPVGAQETGALLLQGGLTAPLDPSEGPR
                     AGFNTSLTFVVGRFALGPEIGWYFTAGRELSPSSRPENTVTTGGVARYDLAGRGWRPY
                     LTGGMALQFWESARGGYPTENAFDVSGGVGLRQVPSRSPIGLAAEFRIHTSLQSADLD
                     GRTFLTATVGLGWRW"
     gene            1471..1950
                     /locus_tag="VGA78_14925"
     CDS             1471..1950
                     /locus_tag="VGA78_14925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895223.1"
                     /translation="MIRWFAGWGPLAALLLGAGVAPLAAQSLDQALAPDAARHSVVRL
                     RLQGARLTGRLMALGGGAARLETASGERSIALGQVDSAWARQRSTRTGAIVGAITGGV
                     GTAIFVGLLASGLCESDCENIGLEGGAVGFGIGAVGGALVGAAIGAAIPRWRLRFPL"
     gene            complement(1947..2165)
                     /locus_tag="VGA78_14930"
     CDS             complement(1947..2165)
                     /locus_tag="VGA78_14930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895224.1"
                     /translation="MVPAVLLLEVAGDAFALEHLARLVGRVFRGPREIAIPLGDQTPE
                     EILSLCVSLQVGVRRSRVVSGTKQLLVT"
     gene            2428..2529
                     /locus_tag="VGA78_14935"
     CDS             2428..2529
                     /locus_tag="VGA78_14935"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX9895225.1"
                     /translation="MKDIISGFFMLVENQFAVGDIVEAAGKTAPWSA"
     gene            2526..2768
                     /locus_tag="VGA78_14940"
     CDS             2526..2768
                     /locus_tag="VGA78_14940"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895226.1"
                     /translation="MTLRVVVLRDLHGVVHIIPNGQIGVVSNLTRGRARAVVEIGVAY
                     RTDIDRALGVFREEAANFATDQAWRLRLDGEPEVLG"
     gene            2918..4420
                     /gene="cysS"
                     /locus_tag="VGA78_14945"
     CDS             2918..4420
                     /gene="cysS"
                     /locus_tag="VGA78_14945"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX9895227.1"
                     /translation="MTLELYNTLTRRVEPFNPIAPPRVTLYTCGPTIWNFAHIGNFRT
                     FLFEDLLRRWLEAGGYQVFHIMNLTDVDDRIIKEAGARSVAIRDFTTPYAEAFFQDRD
                     YLRIRPAHAYPRATDFIPQMIRLVEGLLAKGVAYRGEDGSIYFSIERFPEYGRLSQLD
                     RRELKAGASARVSTDEYAKEDARDFALWKAARPEDEAVQAVWDAPFGRGRPGWHLECS
                     AMALDLIGQQYGTDVLDIHAGGVDLIFPHHEDEIAQSCAYTGRAEFARVWMHGEFLNV
                     RGTKMSKRFGNYTTPRDLKADGVDPGAIRLLLYQTHYRQKLDLTDEALSAASEGARRL
                     GQFGRRLREAERGFDGSAFLAAGERLRRDFTAGLDDDLNAPQAVAAVFTFVTEGNRLL
                     DAGEQPGPQVVAAWRLTDSVLDASTIPQVAEIAAIGRGESRTAVILTSDTPPADGAER
                     LEWARQMAGARADAKARRDFAEADRIRQLLADHGFEVRDRRDGTAEVVRK"
     gene            4496..4571
                     /locus_tag="VGA78_14950"
     tRNA            4496..4571
                     /locus_tag="VGA78_14950"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4529..4531,aa:Thr,seq:tgt)
     gene            4656..4739
                     /locus_tag="VGA78_14955"
     tRNA            4656..4739
                     /locus_tag="VGA78_14955"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4690..4692,aa:Tyr,seq:gta)
     gene            4857..4929
                     /locus_tag="VGA78_14960"
     tRNA            4857..4929
                     /locus_tag="VGA78_14960"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4890..4892,aa:Gly,seq:tcc)
     gene            4931..5003
                     /locus_tag="VGA78_14965"
     tRNA            4931..5003
                     /locus_tag="VGA78_14965"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4964..4966,aa:Thr,seq:ggt)
BASE COUNT          855 a         1699 c         1822 g          950 t
ORIGIN      
        1 agccgcgcca tgaggcagaa tgtcggccgt tgggatcgtg tcatccgtgg tattgccggc
       61 gtgctgctgt tgggtctcta cggtgcgctc cagccgccgc tccggtactt cacgctcatc
      121 ggtctgatgc tgatcgcgac cgccctgatg gggcgctgtc ctctgtacac tctgttgggg
      181 atctcgacct gccgccggac cgtctgagcc tcatctcgtc tgagcaaagt ctcagcgccg
      241 tttcaacatg gtttcagtgc cccggttgta gtgtggtggg cggtaaggcg gaatcccgcg
      301 gtcggcggca ggttcctgcc cgctcgaatc cgaacggaca gaatcaatgc cttaccggtc
      361 cgctctcctg ccgtcctgcc gcccgctgtc cggaggtgcg tatgaaactc atgaaagctg
      421 cgccgatgcc cgcacttcgt cgcgagttcg acaccatgtt cgagcgactg ttccggagcc
      481 ccctgtttcc cgagcttccg gtgctcactg ccgaggccgg gtgggagccc gcgctggacc
      541 tgaccgaggc cgaaaaggag ttcctggttc ggctcgaggt ccccggattc caccgcgaga
      601 atctcgatgt caagtatgag tccggtgtac tcacgatcgc gggcacgcgt gagttccgca
      661 ccgagctcaa gggggaggag ttcctgtggc aggaacgggc cgagggacgc ttcgtccgct
      721 ccatccggat cccggcgccg gtcatcgagg gcgaggtggt cgccacctat gagaacggcg
      781 tgctgacggt caagctgccc aagcatcagc cgacagccaa ggcgaaaatc gccatcaaat
      841 agctggtgcg tggtgggcat ttcgggcgag ccccggcctt caggccgggg ctcggtgcgc
      901 tggaacccga gccgctcctt ggtcgttagg ttccttcatg cgacacggcc tgctggtcct
      961 gaccgccggc gcgctgcttg ccgcccggcc ggtgggcgcg caggagaccg gtgcgctgct
     1021 gctgcagggc gggctcaccg ctcccctcga tccgtcggag ggtccgcggg ccgggttcaa
     1081 caccagcctg acttttgtgg tgggacggtt cgccctcggt cccgaaatcg gctggtactt
     1141 caccgccggc cgggagctca gcccaagcag ccgtcccgag aataccgtga ccaccggtgg
     1201 cgtcgcccgc tacgacctgg ccggtcgagg gtggcggccg tatctcaccg ggggcatggc
     1261 gctccagttc tgggaatccg cccgaggcgg atatccgacc gagaatgcat tcgacgtgag
     1321 cggcggagtc ggtctgcgtc aggtcccttc ccggtctccc attggtctcg ccgcggaatt
     1381 ccggatacac accagcctcc agagtgccga cctggacggc aggactttct tgacggccac
     1441 ggtaggcctg ggctggaggt ggtgatccac atgatccggt ggtttgcggg gtggggcccc
     1501 ctggcggccc tgctcttggg ggccggagtc gcgccgctgg ccgcgcagtc cctggaccag
     1561 gccctggcgc cggatgcggc ccgccactcg gtggtgcggc tccggctcca gggtgcccgg
     1621 ctgaccggac ggctcatggc cctgggcgga ggtgccgcca ggttggaaac ggcgagcggc
     1681 gagcggtcga tcgcgttggg ccaggtggat tccgcctggg cccgccagcg gtccaccagg
     1741 accggggcga tcgtgggggc gatcaccggc ggagtaggca ccgccatctt tgtcgggctg
     1801 ctcgcttccg ggctgtgtga gtccgactgc gagaacatcg ggctcgaggg tggagcagtg
     1861 gggttcggga tcggcgcggt ggggggcgcc ctggtggggg cggcgattgg agccgcgatc
     1921 ccccggtggc ggttgcggtt tccactctag gtcacgagga gttgcttcgt ccctgacacc
     1981 acccggctgc ggcgcacccc aacctgtaac gacacgcaca gcgagaggat ttcttcgggg
     2041 gtctggtcgc ccagagggat ggcgatttcc cgcggacccc gaaacacccg tcccaccagc
     2101 cgggccaggt gttccagggc gaacgcgtcg cctgccactt cgagcagaag gaccgcgggg
     2161 accatttctc agagtgggaa acacgagtaa aggttccggc atccggattg cgcggaccag
     2221 atcccaataa acccgaccgg cgcccgtgac tagctttccc cctatgcagg gcttctcgct
     2281 tcaaagcgcc ctggcgaacc tgctggttcg tctggtcgcc aggcgactca tggactgctc
     2341 agcctcaacc tgttcatcga tatcgcgccg ctcctggccg gcgcggggat cctggggctg
     2401 gccatctcct tcggggcgca gagcctggtg aaggacatca tctccggctt cttcatgctg
     2461 gtggagaatc aatttgcggt tggtgatatc gtcgaggctg ccggtaagac cgcaccgtgg
     2521 agcgcatgac cctgcgggtg gtcgtgttgc gcgatctgca cggcgtggtg cacatcattc
     2581 ccaacggcca gatcggcgtc gtcagcaact tgactcgcgg ccgggcccgc gccgtggttg
     2641 aaatcggggt ggcgtaccgg accgacatcg accgggcgct gggagtcttc cgggaggaag
     2701 cggcgaactt cgcgacggac caggcgtggc gcctgcgact ggatggggag cccgaagtgc
     2761 tggggtagag agcatgacca ataccagatg gtcatccgca ccctcatccg gactcagccc
     2821 ggcgaacaat gggcggcggc ccgggagttt cgccgccgca tgaagatccg gatcgatcgc
     2881 gaggggatga aggtcccgta gccgccgagg agaatccgtg acgctcgagc tctacaatac
     2941 gctcacccgc cgggtggagc ccttcaatcc catcgcgccg ccccgggtca ccctctacac
     3001 ctgcggtccg accatctgga atttcgccca catcgggaac ttccgaacct ttctgttcga
     3061 ggatctcctg cgccgctggc tggaagccgg cggataccag gtgtttcaca tcatgaacct
     3121 gaccgatgtg gatgaccgga tcatcaagga agcgggagcg cgcagcgtcg ccattcgcga
     3181 tttcacgacg ccgtatgccg aggcgttctt tcaggaccgg gattacctgc gcattcggcc
     3241 ggcgcacgcg tatcctcggg ccaccgattt cattccccag atgatccggc tggtggaagg
     3301 tctgctggcc aaaggcgtcg cctaccgggg cgaggatgga tcgatctatt tctccatcga
     3361 gcgcttcccg gagtatgggc gtctctccca gctcgaccgg cgcgagctca aagccggggc
     3421 cagcgcgcgg gtcagtaccg acgagtacgc caaagaggat gcccgcgact tcgcgctctg
     3481 gaaggccgcc cggccggaag acgaggcggt ccaggccgtc tgggatgctc ccttcggccg
     3541 gggccggccc ggctggcatc tcgagtgctc ggccatggcg ctggatctca tcgggcagca
     3601 gtacggcacc gacgtgctcg acattcacgc gggcggggtg gacctgatct tcccccacca
     3661 tgaagacgag atcgcccagt cctgcgccta taccggccgg gccgagttcg cccgggtctg
     3721 gatgcacggg gagttcctga atgtccgcgg gaccaagatg tccaagcggt ttgggaacta
     3781 caccaccccg cgcgatctca aggccgatgg agtcgatcca ggggcaattc gcctgctcct
     3841 gtaccagact cattatcgcc aaaagctgga tttgaccgac gaggccctca gcgccgcgag
     3901 cgagggtgcg cggcggctgg gccaatttgg ccgccggctc agggaggccg agcgcggatt
     3961 cgacgggtcg gccttcctcg ccgcgggaga gcggctccgg cgcgacttca cggcggggct
     4021 ggatgacgac ctcaatgcgc cccaggcggt ggccgcggtc ttcacgttcg tgaccgaagg
     4081 gaaccgcctg ctcgacgcgg gagagcagcc gggcccgcaa gtggtggcgg catggcgcct
     4141 gaccgattcc gtcctggacg cctcgacgat tccccaggta gccgagatcg ccgccatcgg
     4201 tcgtggcgag tcgaggaccg cggttatcct cacgtccgat acccctcccg cggacggggc
     4261 tgagcggctc gaatgggcca ggcaaatggc cggcgcgcgg gccgatgcca aggcccgtcg
     4321 tgattttgcc gaggcggacc gaatcaggca gctgctcgcc gatcacggtt tcgaggtccg
     4381 cgaccgccga gatggcacgg ccgaagtggt gcgaaaatag gtggctttcc tcgttgaccc
     4441 cgaggctaag tctagataga ataagcgtct gtcggatttc cgcgggccag cgccggctga
     4501 cgtagctcaa ttggcggagc agctgatttg taatcagcag gttaagggtt cgagtccctt
     4561 cgtcagctcc agtttggcag gatggtcgtc ggattggtga accccgcctg gtgttgcggg
     4621 gcttcgtgtc gatggccgac tggcagggca ggtcgggtgg ggtggccgag tggctaatgg
     4681 cagcagactg taaatctgcc gggcttcgcc ctacgtaggt tcgaatccta cccccaccat
     4741 gggacggacc gacgggcgga cggactgacg gacggtattg tgaacgcgct cggaacgtca
     4801 ctggcaaggg caacaaaccg tccgtcagtc cgtccgtccg cccgaccgtc ctagttgcgg
     4861 gtgtagctca gttggtagag catcagcctt ccaagctgag ggtcgcgggt tcgagccccg
     4921 tcgcccgctt gctcgcgtag ctcagtcggt agagcacatc cttggtaagg atgaggtcac
     4981 cggttcgatc ccggtcgcga gctctggtaa agtcgggcag acgggcggac ggactggcgg
     5041 gcggtcgccc cacctcaccc gcgcccgttg gtccctaacc ggtcggcgcc gccgcgcggg
     5101 gcaaccaggc gatacaccgc ccgtctgtcc gtccgcccgc ctgcccgccc tgaaccgagt
     5161 gccgcatttc atcggagcac cgattatggc caaggcaaag ttcgagcgta ccaagcccca
     5221 cgtgaacgtc ggcacgattg gccacgtgga ccacgggaag acgacgttga cggcggcgct
     5281 gaccaaggtg tcggcggcca aggggtgggg gacgaagtac atcccg
//
LOCUS       DASWKS010000522         7682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2510065, whole genome shotgun sequence.
ACCESSION   DASWKS010000522 DASWKS010000000
VERSION     DASWKS010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7682
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2510065"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VGA78_14970"
     CDS             <1..279
                     /locus_tag="VGA78_14970"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX9895228.1"
                     /translation="SPPPAAVAGRSVLLVDETCDSGHTLKLALNEVLGRRPREVRTAV
                     SIRTGQYEPDFYALETDKLIVLPWDREVVINGEIVVRPDLAAYLAGEE"
     gene            276..1634
                     /locus_tag="VGA78_14975"
     CDS             276..1634
                     /locus_tag="VGA78_14975"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HEX9895229.1"
                     /translation="MRAELSAAAVSSPAAFTDIRFERRRGVSILHHGRRLQAITERSF
                     TGGVVRCLAPGFAWGSCSFRSLDDLPSAIRRAHEQALALPPRPGPTLPSLPARQLAVQ
                     CLAPADPAAVSIARKLELTDLVAAALFGADRRVIDARVHYVDELVETMVVTSEGIALA
                     EARPEFALSVIATADEAGTTERVVDSLAARSWSDLESGVATAPAIAERAVALLHAAPI
                     RAGRYPIVLAPRAAGMMAHRVVGHLCEADGDSDVRAPLPLGTRVGPDSLTIGDDPTAD
                     GLRGTRAFDHEGLQPRKTTLVQHGVVVGHVHTRSSAARAGAAPTGSGYGVGLDIPRAR
                     LSNTFIASGKTDLADLLDGISLGILVEDLVGASLGGGRAELRAGFAQVIRHGEPSEPI
                     KGVTLGGDALVLLGQIDLVGGDFEWDPAAAWCDRAGAGRIAVSTGAPHVRLVDVSAGD
                     VA"
     gene            1631..2914
                     /locus_tag="VGA78_14980"
     CDS             1631..2914
                     /locus_tag="VGA78_14980"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEX9895230.1"
                     /translation="MIGVVMEAVRPRCGFADSLVQSDETVTVISGEAREEISRVATHQ
                     VHLRVENHGRLGLAVRDDTLVEPLIQSALQSAQYGAESTLLAPAPSPLPNVVTAFPAT
                     AAMGPPDLINLARQLRDRLTVTGREVETWAERSSGRVEVANTHGVMAGYDVTLAGLGL
                     RVRAAPSAGPVMLRLHTAGAAVPSEVLLADLVDEVDQRLAPPLLDQGPSDQPVRVWLE
                     PRAVGALLTPVGQALLARHVWSDAGPLAGRIDEPVLSPELTLVDDPLAEGRPGSRPVD
                     DEGVVCRRQVFIRRGVLRAALADLASATRYGVPASGHGRRSPGAPPWTGWSNLVLEPG
                     KTSTAAIPGELGDGVLIRELPWPGGNCHDGRIALTTPWAYRVERGEITGRYERVMLQG
                     NVFEWLNRVVLVGANARWIGSRCLPDVIVEGVELF"
     gene            complement(3071..3607)
                     /locus_tag="VGA78_14985"
     CDS             complement(3071..3607)
                     /locus_tag="VGA78_14985"
                     /inference="COORDINATES: protein motif:HMM:NF014845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V4R domain-containing protein"
                     /protein_id="HEX9895231.1"
                     /translation="MSDIQTVVLGRRSLHQLRTALERSLGVQAAPLLQEAGFASGEAM
                     TLALQSFISERYGVSRMQDLDAEYFGEALSGFFSTQGWGELSLSPMGDPVLLVDSSNW
                     AEAMPGGGPYPSCHVSAGLLADVFSRIAGGQFAAMEVECRSRGDGRCRFLLAAPETLT
                     LVYERMTHGMSYQASLGG"
     gene            complement(3680..5710)
                     /gene="ligA"
                     /locus_tag="VGA78_14990"
     CDS             complement(3680..5710)
                     /gene="ligA"
                     /locus_tag="VGA78_14990"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEX9895232.1"
                     /translation="MADALSRRAAELRRVIERANRSYYERDAPEISDTEYDRLLRELQ
                     QLEAEHPRLRMPDSPTQRVGGAPAQSLRKHTHQVAMLSLANAFSAEELTAWEERNTRL
                     NAEVKQGGYTTEIKIDGAAVCLTYEKGRLAIGATRGNGLIGEDVTANLRTVQDIPLLL
                     QGTGHPDLMEVRGEVYIPFAAFEKLNQARAAEGDPLLANPRNAAAGALRQLDPAMTRR
                     RRLRFFAYTAEEVKGTLDAPTQHRLMALLESWGFQVAPHHEEHRDLPAVQSRIPAYEH
                     YIEALPFAADGVVVKVNRRDLQEDLGVVGGREPRWAIARKFAPEVAVTRLLEIRINVG
                     RTGALNPWAVLEPVELAGVTVSSATLHNEDIIGAKDIRIGDWVEVVRAGEVIPQLLGP
                     VRDRRTGEEQPFTMPKVCPACGQPVERPVDEVMSYCVNPACPGRIFEGLVHFASREAM
                     DIRGLGGERIRQLLAAGLVRDVADLYSITPAQLVQLERFAEQSANQLVQAIAASKEKP
                     LSCLLFALGIRHVGKTVAVTLARRFGSVEALAAADFDTIEGILGVGETIASVVTDWFR
                     HSKNRDLIDRLARAGVRMSEPHTGQALDGPLRGQSFVLTGTLPTLKRGEAKSLIEAAG
                     GRVAEAVSRQITTVVAGDAAGSKLEKARQLGLEVIDEAELKRRIQVAVTNDG"
     gene            complement(5713..6513)
                     /locus_tag="VGA78_14995"
     CDS             complement(5713..6513)
                     /locus_tag="VGA78_14995"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX9895233.1"
                     /translation="MAESPIAAPPDLQRLQDRIDELEHERARLLGLIEILRDITGALH
                     YPDIVQSVARRLGHLFGLDRCSVFLAARAGGPDVHLVASYEDPSIRNHLVDLSRYPEI
                     RRSIETGQVVYIPDAMADPTLVAAVPQLASRRVKSITVVPMTWQGHVIGTLFLRTYRE
                     GTPFTEDDVEFCRVVAEATARALRVAHRMERLQARQGMQALLVADRERAAMLAFIRRL
                     VDAFGDRERAFGENLLAKVSVQELDRLVGLALTVIGQEARGSQEPQPR"
     gene            6628..6870
                     /locus_tag="VGA78_15000"
     CDS             6628..6870
                     /locus_tag="VGA78_15000"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEX9895234.1"
                     /translation="MQDEDYEVVDDRAGSAGSFVAGVLIGALAGVAVGMLYAPASGQS
                     TRRRLRRKFDRLRDEAGDRVDEFGRRARRKLAEMRE"
     gene            complement(6958..>7682)
                     /locus_tag="VGA78_15005"
     CDS             complement(6958..>7682)
                     /locus_tag="VGA78_15005"
                     /inference="COORDINATES: protein motif:HMM:NF045274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895235.1"
                     /translation="AQNGPDRMSEGIAAMKALDPRGAADIFEAILAGDSLQAEANWRA
                     ALALIDIGKQSRDGDRNPARDSLYRLAERYARRAVTLAPDSAAAHFALALALGRSALT
                     KGKKERIRSALEIRNEARRTLELNPEHDGAWHVLGRWHAEIERLSNLEEFFARRFLGG
                     DVFGEASLAEAVRCMERAVELRGDFIYHRLDLAEVYVELKRWDDARAQLNVIPDLPAQ
                     DVMDHVYRARAGVLLNKIRNKH"
BASE COUNT         1157 a         2621 c         2593 g         1311 t
ORIGIN      
        1 tctccccccc ccgccgcggt cgccggcagg agcgtcctgc tggtggacga gacctgcgac
       61 tcgggacaca ccctcaagct ggcgctgaac gaggtcctgg gccgacggcc tcgcgaagtc
      121 cggaccgccg tctccatccg gaccggccag tatgagcccg acttctacgc cctggagacc
      181 gacaagctca tcgtgctgcc ctgggatcgc gaggttgtga tcaacggcga gattgtggtt
      241 cggcccgacc tcgccgccta cctggcgggc gaggagtgag ggccgagctc tccgccgccg
      301 ctgtctcctc acccgccgcc ttcaccgaca tccgtttcga acgtcgccgg ggggtctcga
      361 tcctccatca cggccgtcgt cttcaggcga tcaccgagcg gtcgttcacc ggtggggtcg
      421 tgcggtgcct cgctcccggt ttcgcctggg gtagttgcag cttccggagt ctggatgacc
      481 ttccctccgc catccgacgg gcccacgagc aggcattggc ccttcccccc cgccccggcc
      541 cgaccctgcc ctccctgccg gcccgacagc tcgcggtgca gtgtctcgct cctgcggatc
      601 ccgcggcggt ctcgatcgcc cgcaagctcg agctgaccga cctggtggcg gcggcactct
      661 tcggggccga tcgccgggtg atcgacgccc gggtccatta tgtcgacgag ctggtggaaa
      721 ccatggtggt gacgtccgag ggcatcgcgc tggccgaggc ccgccccgaa ttcgcgctct
      781 cggttatcgc cacggccgat gaggcgggaa ccaccgaacg ggtggtggac agtctcgccg
      841 ctcgatcctg gtcggatctc gagtccggcg tcgccactgc acccgccatc gccgagcggg
      901 cggtcgcgct gctgcacgcc gcgccgatcc gggctggtcg ctaccccatc gtgctggcac
      961 cccgggcggc cgggatgatg gcccatcggg tggtggggca tctctgtgag gcggatggcg
     1021 acagcgacgt tcgcgcaccc ctgccgctgg ggaccagagt gggacctgac agccttacca
     1081 tcggcgacga tcctaccgct gatggtttgc ggggaacccg ggccttcgat cacgaggggc
     1141 ttcagccccg caagaccacc ctggtgcagc acggggtcgt ggtggggcac gtccataccc
     1201 ggagttcggc cgcccgggcc ggagcggctc ccaccgggag cgggtacggc gtcggactcg
     1261 acatcccccg ggctcgactc tccaatacct tcatcgccag cggcaagacg gacctggccg
     1321 atctgctcga cgggatttcc ctcgggattc tggtcgagga cctggtcggg gccagcctgg
     1381 gcgggggaag ggccgagctc cgggcgggct tcgcccaggt gatccgccat ggggagccca
     1441 gcgagcccat aaagggggtg actctcggag gtgacgccct ggtgctgctg ggccagatcg
     1501 atctggtggg cggagacttc gagtgggacc ccgccgctgc ctggtgcgat cgcgccgggg
     1561 ccggtcgcat cgccgtgagc accggcgcgc cccatgtccg cctggtcgat gtctcggcgg
     1621 gagacgtcgc gtgattggag tggtgatgga ggccgtccgg ccgcggtgcg gcttcgccga
     1681 ctcgctggtt cagagtgacg agaccgtcac ggtcatttcg ggtgaggccc gggaggaaat
     1741 atcgcgggtg gcaacccacc aggttcacct ccgggtggag aaccatggtc gcctgggcct
     1801 ggccgttcgc gatgacaccc tggtcgagcc gctgatacag agcgcgctgc agagtgccca
     1861 atacggggcg gagtccaccc ttctggcgcc cgccccgtcg ccccttccta acgtggtcac
     1921 cgcctttccc gcgaccgccg cgatggggcc acccgacctg atcaatctgg cccggcaact
     1981 acgcgaccgg ctcacggtca cgggacgcga ggtcgaaacc tgggccgagc gctccagcgg
     2041 acgggtggaa gtcgccaaca cccatggtgt catggctggc tacgatgtga cactggccgg
     2101 cctggggctg cgggtgcgag ccgcaccctc ggcaggaccg gtcatgctgc ggctccatac
     2161 ggctggtgcc gccgtcccga gcgaggtcct gttggctgac ttggttgacg aggtcgacca
     2221 gcgcctggct ccaccgttgc tggaccaggg cccgagcgac cagccggttc gagtgtggct
     2281 ggagccgcgg gcggtcggtg cgctcctgac cccggtgggt caggccttgc tcgcccgcca
     2341 tgtctggtcc gacgcgggac ctctggccgg tcgcattgac gagccggttc tgtcaccaga
     2401 gctgacgctg gtggacgatc ccctggctga gggtcggcct ggctctcgtc cggtggatga
     2461 cgaaggagtg gtatgccgcc ggcaggtctt tatccggcgg ggcgtgctgc gagccgccct
     2521 ggccgatctg gccagcgcca cgcgctacgg ggttcccgcc agcggccacg gacgccgctc
     2581 accgggggca ccgccttgga ccgggtggtc caacttggtg ctggagccgg gcaaaacctc
     2641 cacggccgca atcccgggcg agctgggcga tggggtcctg atacgcgagc tgccctggcc
     2701 ggggggcaac tgtcacgatg gacgaattgc cctgacgacc ccgtgggcct atcgggtgga
     2761 gcggggagag atcaccgggc gctacgagcg cgtgatgttg cagggcaatg tgtttgagtg
     2821 gctaaatcgc gtcgtgctgg ttggcgcgaa cgcgcgttgg attggatcgc gttgcctgcc
     2881 ggatgtaatt gtggaggggg tcgagctgtt ctaagcgggt tccgggttcc gggttccggg
     2941 ttcctggttc caggtaccac gtgcggtgct cggtgcggtg ccaggtgccg ggtgccaggt
     3001 gtagtccgcc ctggaacgat tcactcggca ccgcacgtgg taccaggaac caggaactcg
     3061 gaacccgctt ctaccccccc agacttgcct gatagctcat tccgtgggtc atgcgctcat
     3121 acaccagcgt cagcgtctcg ggcgcggcga gcagaaaccg gcaccggccg tccccccggc
     3181 tgcggcactc cacctccatc gccgcgaact ggccccccgc gatgcgcgag aacacgtctg
     3241 ccaggagtcc ggccgataca tggcaggagg gatagggacc accgccgggc atcgcctccg
     3301 cccagttgct cgaatccact agcagcaccg ggtcacccat ggggctcaag ctgagctcac
     3361 cccatccctg ggtgctgaag aacccgctca gagcctcccc gaagtactcg gcgtcgaggt
     3421 cctgcatccg gctcacgccg taccgctccg aaatgaagga ctggagcgcc agggtcatcg
     3481 cctcgccgct ggcgaacccc gcctcctgca gcaacggggc ggcctgaacg ccaagcgatc
     3541 gctccagcgc cgtccggagc tggtgcaggg aacgacggcc gagaacaacg gtctggatgt
     3601 ccgacatggt cttcctcgct gtgatgaccc gtgacgcatg ggatagggct gtgggactgc
     3661 gaacgacttc cgtcatcgct catccgtcat tcgtcacggc cacttggatc cgccgcttga
     3721 gttccgcttc atcgatgacc tcgaggccca attgcctcgc cttctccagt ttactgccgg
     3781 ccgcgtcgcc ggctacgacc gtagtgatct ggcgcgacac tgcctcggcg acccggccgc
     3841 ccgcggcttc gatcaggctt ttcgcttcgc cccgcttgag cgtcggtaac gtcccggtca
     3901 gcacgaacga ctgaccgcgc aacggtccgt ccagcgcctg ccccgtatgc ggctcgctca
     3961 tccgcactcc ggcccgggcg aggcggtcga tcagatcccg gttcttggaa tgccggaacc
     4021 agtcggtcac cacggaggcg atggtctcac cgacaccgag gatgccttcg atggtgtcga
     4081 agtccgccgc cgccaaggcc tccaccgacc cgaaacggcg ggccaacgtc acggcgaccg
     4141 tcttgccgac gtgtcggatt cccagcgcga agagcaggca cgacagcggc ttctccttcg
     4201 aggccgcgat cgcctgcacc agctggttgg cggactgctc cgcaaaccgt tccagttgca
     4261 cgagttgtgc cggggtgatg gagtacaggt cggccacgtc cctaaccagt cctgcggcca
     4321 gcagttgcct gatccgctcg ccccccagcc cccggatgtc catggcctcc cgggacgcga
     4381 aatgcaccag gccttcgaaa atccggcccg ggcatgccgg gttcacgcag taggacatca
     4441 cctcgtccac cggccgctcc accggttgcc cgcaggcggg acagaccttg ggcatggtga
     4501 agggctgttc ctccccggtc cgccggtcgc ggaccgggcc cagcagctgg gggatcacct
     4561 cacccgcccg aaccacctcg acccagtcgc cgatccggat gtccttggcg ccaatgatgt
     4621 cttcgttgtg cagcgtggcg ctggagacgg tcaccccggc cagctcaacc ggctccagga
     4681 ccgcccaggg attgagggcg ccggtgcggc cgacgttgat ccggatttcc agcagccggg
     4741 tgaccgccac ctcgggcgcg aatttgcggg cgatggccca gcgcggctcc ctcccgccta
     4801 caacgcccag gtcttcctgg agatcccgcc gattcacctt caccaccacc ccatcggcgg
     4861 cgaacggcaa cgcttcgatg taatgctcgt acgccggaat gcgggactgg accgccggca
     4921 ggtcccggtg ctcctcatgg tggggcgcga cctgaaagcc ccacgactcg agcagcgcca
     4981 tcaatcgatg ctgggtggga gcgtccagcg ttcccttcac ctcttcggcg gtgtaggcga
     5041 aaaaccggag gcggcgccgg cgcgtcatgg ccggatccag ctgccgcagc gcgcccgccg
     5101 cggcgttgcg gggattggcg agcagcgggt ctccttccgc cgcccgcgcc tggttgagct
     5161 tctcgaatgc ggcgaagggg atgtagacct cgccccgaac ctccatcaga tccggatgcc
     5221 cggttccctg gagcagcagg ggaatgtcct ggacggtgcg gagattcgcg gtgacgtcct
     5281 cgccaatcag gccgtttccc cgggtggcgc cgatagcgag ccggcccttc tcgtaggtga
     5341 gacagaccgc ggcaccatcg atcttgattt cggtggtgta gccgccctgt ttcacctcgg
     5401 cattgaggcg ggtgttccgt tcttcccagg cggtcagctc ctccgcggag aacgcgttcg
     5461 cgagggagag catcgcgacc tggtgggtgt gcttgcgaag cgactgggcg ggcgctccac
     5521 ccactcgctg ggtaggactg tcgggcatgc ggagccgcgg atgttcggct tccagttgct
     5581 gcagttcccg cagcagccgg tcgtactccg tgtcggagat ctcgggcgcg tcccgctcgt
     5641 agtaggagcg gttggcccgc tcgatgactc gtcggagttc cgccgcccgg cgggacagcg
     5701 cgtcggccat tgttaccgcg gctgcggctc ctgggatcct cgggcttcct gcccgatgac
     5761 cgtgagcgca agccccacca ggcgatccag ctcctggacc gagaccttgg cgagcaggtt
     5821 ttcgccgaaa gcccgttccc gatccccgaa ggcgtccacc aggcggcgga tgaatgcgag
     5881 catggcggcc cgctcccggt ccgccaccag cagcgcctgc atgccctgcc gggcctgcaa
     5941 ccgttccatt cggtgcgcca cccgcagcgc ccgggccgtg gcctccgcca cgactcggca
     6001 gaattccacg tcgtcctcgg tgaacggcgt cccttcgcgg taggtgcgga ggaacagggt
     6061 cccgatcacg tgtccttgcc aggtcatggg aacgaccgtg atggacttca cccgccgaga
     6121 ggccagctgc ggcaccgcgg cgaccagagt gggatcggcc atcgcgtccg ggatgtacac
     6181 cacctgcccg gtctcgatgg aacgccggat ctcgggatac cggctcaggt ccaccaggtg
     6241 gttcctgatg gatggatcct catagctcgc caccaggtgc acgtcgggtc cgccggcgcg
     6301 tgccgccagg aagaccgaac agcggtccag gccgaacagg tggcccaggc gccgggccac
     6361 ggactgcacg atgtcgggat agtgcagggc cccggtgatg tcccgcagga tctcgatcag
     6421 gcccagcaac cgcgcgcgct cgtgctccag ctcgtcgatc cggtcctgca gccgctgcag
     6481 gtcagggggt gctgcgatcg gggattcagc cattgggaag ggggaacatg gttgcggggc
     6541 ggtggacagg tcaagttgat gcccgcgccg ttccggggct acgttcaata ggcacggtga
     6601 attggactca tcctcggtga ggttcccatg caggacgagg actacgaagt ggtcgacgat
     6661 cgggccggga gcgccggcag ctttgtggct ggggtgctga tcggcgcctt ggccggggta
     6721 gcggtcggga tgctctatgc gccggcatcg ggccagtcca cccgccgccg gctgcgccgg
     6781 aagttcgacc gactgcggga cgaagcggga gatcgggtgg acgagttcgg ccgacgggcc
     6841 cgccggaagc tggcggagat gcgggaatga gacagccaat tgatgattga caattgtcga
     6901 ttgatgattg ctctcaggcg ctccggagct caatcgtcaa tcgtcaattg tcaatcgtca
     6961 atgcttgttc ctgatcttgt tgagcaaaac gcccgcccgg gcccggtaca cgtgatccat
     7021 gacgtcctgc gccgggaggt ccgggatgac gttgagctgc gcccgggcgt cgtcccagcg
     7081 tttgagctcg acgtagactt ccgccaggtc gagccgatgg taaatgaaat caccgcggag
     7141 ctccaccgcc cgctccatgc atcggaccgc ctcggccaat gaggcttcgc caaacacatc
     7201 gccgcccagg aatcttctcg cgaagaactc ctccaggttc gacaggcgct cgatttcggc
     7261 atgccagcgg cccagcacat gccaggcccc gtcgtgctcc ggattgagct ccagcgtccg
     7321 ccgggcctcg ttccggatct ccagcgcgga acgaatccgc tccttcttgc ctttggtgag
     7381 ggcggaccgg cccagcgcca gggccagcgc gaaatgagcg gcggccgaat cgggagccag
     7441 ggtgacggcc cgtcgggcat atcgctccgc cagccggtac agggaatcgc gagcgggatt
     7501 ccgatccccg tcccggctct gcttcccgat gtcgatcaac gccagggcgg cgcgccagtt
     7561 ggcctcggcc tgaagcgagt cgccggccag gatggcttcg aagatgtccg cggctccacg
     7621 gggatcgagt gccttcatcg ccgcgatccc ctcgctcatt cgatccggtc cgttctgagc
     7681 ct
//
LOCUS       DASWKS010000523         6416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_279757, whole genome shotgun sequence.
ACCESSION   DASWKS010000523 DASWKS010000000
VERSION     DASWKS010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279757"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VGA78_15010"
     CDS             <1..639
                     /locus_tag="VGA78_15010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895236.1"
                     /translation="PSDARWTCFSTSIADQEGRPADFLLLPPSVGPARLTGAHIEDVR
                     FVRDEQANLVWAIEQTTEGGDGLPWPGRERHVASTTREPREPIPATTAPLIYRLQSFV
                     PWHWFPMLPVSLDQFTGETALERGQMIRPDGITSPAPDGRLLQAPIQGVYRVREEAVP
                     RTGLKVVREVVRSRWLLGETHLWIARRKTAGRGEGSSGLRYDEARRSTPSVS"
     gene            complement(650..1222)
                     /locus_tag="VGA78_15015"
     CDS             complement(650..1222)
                     /locus_tag="VGA78_15015"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HEX9895237.1"
                     /translation="MTPEAIGLVRESWAQVEDTRVDLAHAFYRHLFEIAPHVQSLFSQ
                     VTVSVQEEKFADMLGEIILVLDRPYQLLPQISLLGRRHMQYGVTAADYAPVGDALLLA
                     LKDRLGKRFTPRDSESLPLRGLGLAGVERHEHGRVRQLLATQAVTIAPVARNSESRIM
                     VASVQHRLESGQGGLVRVEPAKLNGDSPLT"
     gene            1364..4504
                     /locus_tag="VGA78_15020"
     CDS             1364..4504
                     /locus_tag="VGA78_15020"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9895238.1"
                     /translation="MPVDPQQVLQAALQDRYRIGPLLGRGGMAQVYVADDLKHQRQVA
                     VKVLRPELTVTLGRDRFLREIQIAARLNHPHILTLHDSGDAEGLLYYVMPYVEGESLL
                     QRLDRDGPLPIDEAVRIVHDVASALAYAHGRGVLHRDIKPGNILLSDGHAVVADFGLA
                     LAVTEAKTDSDITSEGLTIGTPAYMSPEQGSGEEPLDARCDIYALGCVLFELLAGNPP
                     YVASDPRAILAKHASEPVPSIRTIRGEVPEWLDQAVQRALAKEPANRFPSAAAFAAAL
                     EHEGLGVAPGLRAMRRWRMATATAAVLGAVALGWAIWQEIFSESARVNRLQLDTTRYA
                     ILPLDYSADVTERFQDEQLVRDAFARWTGLTLVDAGQVKEAIGRERQSRLTATGALRI
                     ARAVGAGRFLRGEVSRVGDSLRLHMVLYDATKGSEPLSEAVSGFSPSLIGADSIMTRL
                     AGQVLVHRGPRISPPLQLPPTRSVPAAQLWLRGHQAIGEWDLIAADSGFAAAARADPG
                     FAEALVWQAMVRAWRGLTPDEWQFVAQQAAANPDRLGLRSQRIAQALLAFDNRDVAAA
                     IWRELAAADPRDFAAWYSLATVVRTDIAVVRDRASPSGWRYRSSYHEAVQAFRRALTL
                     QPAIHRALGAGSFERVRDLLFTSLGRTRGGRALGPEHLLFVAYPGWEGDSLVFIPWPT
                     AALQQGDPRVIPSSREQAVREQRRIFHELAQVWATADPSSSHAFEALAIALELIGHPA
                     AFDTLRRARALADSPAERVAVGASEVWLRLRQAIPEDTLGIRRVRALADSLLAETEQA
                     QIDPNTLSGIAALRGRVAQAVRLSGLATMRRSAPASVSVPLTRDGPALLIYAAFGGPA
                     DSIVRLERRVAAAIDGSLPQAERVDARREYLTRPATLAFPEIRFQSLPELEGTGDPLL
                     DAQLAAWTGRPDSARGYFEGTSEQRRSVLPEALSFDGLYPEARLLAFLGDTTAALAWG
                     EPSLQALGRVEPRRLAAPVNTASLMRLIALYAVLNDRMGDRGTARTWARVITILWDGA
                     DPDLRPVVHRMERLLQ"
     gene            4531..5787
                     /locus_tag="VGA78_15025"
     CDS             4531..5787
                     /locus_tag="VGA78_15025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895239.1"
                     /translation="MNALPRFSKALRAGTAVTLLLPLMYACADEPVPLVVEFRPDCPY
                     EGAIRFQDSAGQEIQAYTELAVPGSLTMTPEYHDCQRFILPGSPTYGPLVAIFAAERL
                     GELIDSLEFLDQTQTSLLAMPVAQILSFDGDYASLGILRGHNCVYLWKKAATYDAYVL
                     PVQNQQRCAERHPPNALPAGGTPLTVQVRTRPDPPFNREDYPDVARWDRDVPGQQQGM
                     ALGCGKGWCEIGPTGYAAVPSHDWPALPKEHRRTVVMKGWYDEQPLADSTPAGLLVSS
                     VIGTIFPHPDLRNRTLQNYDSTWTEAAYVTLSAPLPKYKTRLNLDAGNLPARQMNVIS
                     LCRGPRSSCGVPPQPSGATTCKKAADPWWARIISVQQDTAYRCVIRRVHPGLTIPGAV
                     RWRWSPDDEIGWIRCPEGCCEMTGDS"
     gene            5980..>6416
                     /locus_tag="VGA78_15030"
     CDS             5980..>6416
                     /locus_tag="VGA78_15030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895240.1"
                     /translation="MLRLRHRSVRCTGFLAILAAAPVFAQINTTDTRLLSQPAVGGDR
                     IAFAYAGDLWTARTDGNDVRRLTTAVGDEAAPVFSPDGQWIAFAGNSDGNVDVYVIPA
                     TGGEPRRLTWHPGGDIPQAFTPDGRKVLFTSARADFSGRYAHL"
BASE COUNT          998 a         2241 c         2103 g         1074 t
ORIGIN      
        1 ccctcggatg cccggtggac ctgcttctcc acctcgatcg ccgaccagga aggccgaccc
       61 gccgacttcc tgcttctgcc tcccagcgtc ggaccggcgc gcttgacggg agctcacatc
      121 gaagatgtgc gcttcgtgcg cgacgagcag gccaacctgg tatgggctat cgagcagacc
      181 accgagggcg gtgacggtct accctggcca gggcgcgaac gtcacgtagc gtcaacgacg
      241 cgggaaccaa gggagccgat tcccgccacc acggcgccgc tcatctaccg gctccagagt
      301 tttgtaccct ggcactggtt ccccatgttg cctgtctcgc tcgaccagtt caccggtgag
      361 accgccctgg aacgcggcca aatgatccga ccggacggga tcaccagtcc ggctccagat
      421 ggacggctgc tccaggctcc aatccaaggg gtttaccgcg tccgggaaga ggccgtaccc
      481 cgtacggggc tcaaggttgt gcgtgaggtc gttcgcagtc gatggctcct gggagagacc
      541 cacctgtgga tcgcgcgacg caaaaccgca ggccggggcg aggggtcgag cggcttgcga
      601 tacgatgagg cccgacgctc gacgccttcg gttagttagc ggttctcctt cacgtcaggg
      661 gagagtcgcc gttgagcttg gccggttcaa cacggaccag tccgccctgc ccggactcga
      721 ggcgatgctg aacggaggcg accatgatgc ggctttcact gttcctcgcg accggcgcga
      781 ttgtcacggc ctgtgtggcg aggagctggc ggaccctacc atgttcgtgt cgctcgacgc
      841 ccgccagtcc caggccgcgg agcgggaggg attccgagtc ccgaggcgtg aaccgcttgc
      901 ccagccggtc cttcaaggct agcagcagcg cgtcgcccac gggcgcgtaa tccgcagcgg
      961 tcacaccgta ttgcatgtgt cgccgtccca gcaggctgat ctgcggcagg agttgatagg
     1021 gccggtcgag caccaggatg atttccccca gcatatcggc aaacttctcc tcctgtaccg
     1081 atacggtcac ctgggagaac aggctctgaa cgtgaggggc gatctcgaac aggtggcggt
     1141 agaacgcgtg cgccaagtcc acccgggtgt cttccacctg ggcccaactc tcgcgcacga
     1201 gcccaatggc ttcgggcgtc atggaagctc ccccgtctgg gcaatgttcg gccgcggccc
     1261 ggtggttgtc aaccgcggac cgtgcgccct cccccctggt gtccggcttg cgaaccccca
     1321 gggcggggca gcatcatagg gtacctcgac cactggcctt tcggtgccgg tcgaccctca
     1381 gcaggtattg caggctgccc tccaggaccg ctatcgcatt gggcccttgc tcgggcgcgg
     1441 tggcatggcc caggtgtatg tcgccgacga tctgaagcac cagcggcagg tcgccgtaaa
     1501 ggtcctccgc ccggaactga cagtcaccct ggggcgtgac cgctttcttc gtgaaatcca
     1561 gattgccgcc cggctcaatc acccccacat cctgaccctg cacgactcgg gggacgccga
     1621 gggcctcctc tactacgtca tgccgtacgt ggagggcgag tcgctcctcc agcggctcga
     1681 ccgcgacggg ccgcttccga tcgatgaggc ggtgcgcatc gtccatgatg tggccagcgc
     1741 gctggcctat gcccacggac ggggggtcct ccaccgcgac atcaagccgg gcaacatcct
     1801 cctgtccgat ggccacgcgg tcgttgccga tttcggcctt gccctggccg tgaccgaggc
     1861 caagaccgat agcgacatca ccagcgaagg cctgaccatc ggcacgccgg cctacatgtc
     1921 gcccgagcaa gggagcggcg aggagcccct cgacgcacgg tgcgacatct acgcgttggg
     1981 ctgcgtgctg ttcgagctgc tggccggcaa tcctccctac gtcgcctcgg atccgcgcgc
     2041 catactggcc aagcacgcca gcgagccggt accgtcgatt cgcaccatcc gcggtgaagt
     2101 gccggaatgg ctggatcagg cggtgcagcg agctctggcc aaggagcccg ccaaccgctt
     2161 tccctccgct gccgccttcg ccgcagcgct ggagcatgaa ggactgggag tcgccccagg
     2221 actgcgggcc atgcgccgct ggcggatggc caccgcaact gcggcggtac tcggggcagt
     2281 ggcgctcggc tgggcgatct ggcaggaaat cttctcggaa tcggcccgtg tgaaccgcct
     2341 gcagctggac actacccgtt atgccattct gcccctcgac tacagcgccg atgtaacgga
     2401 acggttccag gacgagcaac tggtgcggga tgccttcgcc cgctggaccg ggttgaccct
     2461 tgtcgatgcc ggccaggtga aggaggccat cgggcgagaa cggcagtcgc ggctgaccgc
     2521 gaccggtgcc ctgcggatcg cccgggcggt cggggccggc cggttcctcc ggggagaggt
     2581 atcccgagtg ggagattcgc tccggttgca tatggtcctc tacgacgcca ccaagggatc
     2641 ggaaccgctt tcggaagcgg tgagtgggtt ttctccctcc ctgatcggcg ccgactcgat
     2701 catgacccgg ctggccggcc aggtgctggt ccaccggggc ccccggatca gccccccgct
     2761 gcagctccca cccacccgat ccgttcccgc cgcgcagctg tggctcaggg gtcaccaggc
     2821 catcggggag tgggacttga tcgccgcgga cagcgggttc gccgcggccg cgcgggccga
     2881 tcccgggttc gccgaggcgc tggtgtggca ggccatggta agagcctggc gcggcctcac
     2941 cccggacgaa tggcagttcg ttgcccagca ggcggcggcg aatcccgacc ggctggggct
     3001 cagaagccag cggattgccc aagccctgct cgccttcgac aatcgggatg tagctgccgc
     3061 gatctggcgg gagcttgccg ccgcggaccc tcgcgatttc gcggcctggt acagtctggc
     3121 cacggtggtg cggaccgaca tcgcggtagt tcgcgatcgc gccagtccct cgggctggcg
     3181 ctaccggagc agttatcacg aggcggtgca ggctttccgg cgcgcactca cgcttcagcc
     3241 cgccattcac cgcgccttgg gcgctggatc cttcgaacgg gtccgcgacc tgctctttac
     3301 cagcctcggc cgtacccggg gcggccgggc actcggaccg gaacatctcc tgttcgtggc
     3361 ctatcccggc tgggagggtg acagcctggt cttcatcccc tggccgacgg cggcgctcca
     3421 gcagggcgat ccccgggtga ttccgtccag ccgcgagcag gcagtccgcg agcagcgaag
     3481 gatcttccat gagctggccc aggtctgggc cacggcagac ccctccagct cgcatgcctt
     3541 cgaggcgctg gccatcgcgc tcgagttgat cgggcatccc gccgcgttcg acaccttgcg
     3601 gcgcgcccgg gcgctggcgg actcgccggc cgagcgggtg gcagtgggcg cgtccgaggt
     3661 atggctgagg cttcggcagg caataccgga ggacaccctc gggatccgcc gagtccgagc
     3721 tctagcggat tccctgctgg cggaaaccga gcaggcgcag atcgatccca acaccctgtc
     3781 cggcatcgca gcgcttcgag gacgggtggc tcaggcggtc cgtttgagcg ggctggccac
     3841 gatgcggcgg agcgcccccg cgtcagtgtc ggtcccccta acccgggacg ggccggctct
     3901 ccttatctat gccgcgttcg gaggtcccgc ggacagcatc gtccgtctgg agcgccgggt
     3961 cgccgcggcc atcgacgggt cgctccccca ggccgagcgg gtcgatgcgc ggcgggagta
     4021 tctgacccga ccggcgaccc tggcgttccc cgagatccga ttccaatctc tacccgagct
     4081 ggaaggaacc ggcgatccac tgctggacgc gcagctcgcg gcatggaccg gccgtccgga
     4141 cagcgcccgc ggctacttcg agggcaccag cgagcagcgg cgatcggtcc tgccggaggc
     4201 attgtcattc gatggactct atccggaggc ccggctgctg gcttttctgg gtgataccac
     4261 ggcagccctg gcctggggcg agccgagcct gcaggcgctc ggccgggtcg agccgcgccg
     4321 tctggccgct ccggtgaata cggcttcgct gatgcggttg atcgcgctct acgccgtgct
     4381 gaatgaccgg atgggggacc gtggcacggc ccgaacctgg gcccgggtta tcaccattct
     4441 gtgggacggt gccgatccgg accttcgacc agtggtgcac cgcatggaga gactgctcca
     4501 gtaggtacgc ttcgaccctg gggggaacgt atgaacgctc taccgcggtt ctcgaaagcg
     4561 ctgcgcgcag gaacggctgt cacactgttg ctgccgctga tgtacgcctg cgccgatgag
     4621 ccggttcctt tggtggtgga attccggccg gattgtccct acgaaggcgc catccggttt
     4681 caggactccg ccggacagga gatccaggcc tacaccgaac tcgccgtacc ggggagcctg
     4741 accatgactc ccgagtacca cgattgccag cggttcatcc ttccgggcag ccccacatat
     4801 ggaccgttgg tggcgatctt cgccgccgag cgactgggcg aactgatcga cagcctggaa
     4861 ttcctcgacc agacccagac ctccctgctg gccatgccgg tcgctcagat cctcagcttc
     4921 gacggcgatt acgcttccct gggcatcctc cggggacaca actgcgtcta cctctggaaa
     4981 aaggccgcca cctacgacgc ctacgtgctt ccggtccaga atcagcagcg gtgcgccgaa
     5041 cgccacccgc ccaacgccct tcccgccggc ggcacacccc tgacggtgca ggtccggacc
     5101 agacccgatc ctccgttcaa tcgcgaggac tatccggatg tggcgcgatg ggaccgcgac
     5161 gtgcccgggc agcagcaggg aatggcgctc gggtgtggca agggctggtg cgagatcgga
     5221 ccgaccggct acgcggccgt gccttcgcac gattggcctg ccctgcccaa ggaacaccgc
     5281 cgcactgtcg tgatgaaggg gtggtacgat gagcagccac tggccgactc gaccccggcg
     5341 gggctcctgg tcagcagcgt catcggaacc atcttcccgc atccggatct caggaatcgc
     5401 accttgcaga actacgattc cacctggaca gaggccgcct acgtgacgct cagcgctccg
     5461 ctgcccaagt acaagacgcg cctcaacctc gacgccggca atcttccggc ccgccagatg
     5521 aacgtgattt cgctctgccg cgggccgcgc tcctcctgtg gcgtgccgcc acagcccagt
     5581 ggcgccacca cctgcaaaaa agccgcggac ccgtggtggg cccggatcat ctcggtccag
     5641 caggacaccg cctatcgctg cgtgatccgc cgggtgcatc ccggactcac gattccgggc
     5701 gcggtgcgat ggcgctggtc gccggacgac gagatcggat ggatccgctg tcccgaggga
     5761 tgctgcgaga tgaccggcga ctcctagccg gagcccggac cgccagccgc gctactcgtc
     5821 ggcgggcacc ttgtcatatc gcgcgggttc ggcgtccgcc caatcaagcc tccgaccagg
     5881 ccccggcggc gtcggtcgcg gctcaagccc cgcgcgtgct tgccgcgggc cggaccccgc
     5941 ggtagactgc atcctcgcgt ttcaatctgg agtcctccga tgcttcgcct tcggcaccgc
     6001 tcggtcaggt gcaccggctt tctggccatc ctggccgccg cccccgtctt cgcgcagata
     6061 aatacgacgg atacccggct gctctcccag cccgccgtag gcggggaccg gatcgccttc
     6121 gcctatgcgg gcgacctctg gaccgcccgc accgacggca acgacgtccg ccggcttaca
     6181 acggccgttg gcgatgaggc cgcaccggtg ttttcgcccg acggccagtg gattgccttc
     6241 gccggcaact ccgacgggaa cgtcgacgtt tatgtgatcc cggcgactgg cggagagcct
     6301 cgccggctca cctggcaccc cgggggcgac attccccagg cgttcacgcc cgacggccgg
     6361 aaggtgctgt tcaccagcgc ccgcgccgat ttctccggcc gctacgcgca cctctg
//
LOCUS       DASWKS010000524        10236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3244663, whole genome shotgun sequence.
ACCESSION   DASWKS010000524 DASWKS010000000
VERSION     DASWKS010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10236
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3244663"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VGA78_15035"
     CDS             complement(<1..735)
                     /locus_tag="VGA78_15035"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895241.1"
                     /translation="MTRLAAIAVFACSGLSVWSTPSLTAQQRGATDPFAPVRAHARSA
                     VSDSGVPSLAVAVAKGGKIIWAEGFGWADREQRIPATEHTTYSLASISKPITATGLMI
                     LVERGKVQLDRPANEYLGSGKITGLAGDAAAATVRRVANHTAGLPLHYVFYYDGAVDR
                     VPTMDEAIARYAITTYPPGSAWQYSNLGFGIIDWIIERASGVSYPDFMRSEVFLPLGM
                     TRSSIHLWPGLEPFAATRYDNQGHRIP"
     gene            800..3082
                     /locus_tag="VGA78_15040"
     CDS             800..3082
                     /locus_tag="VGA78_15040"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX9895242.1"
                     /translation="MPLLALLLLQLPAAPLTVDHYRRAEQFLAANAERLVFHNRVTPR
                     WIAGSDRFWYRVRTGDASYRFRLADPARRSVTDAFDHVRLATALGAASGAAVRADSLP
                     FDTIAWSARGDSLTVPIGAKRWRCSLGRWSCVEAAPPRSPEPGAAWSPDSSMRVVRVG
                     GDLGLRRGADTTTARLTSDAEPEYDYGSMPGNSTYYVSSLRTGAVAPPAVLWSPDGRR
                     FVSYRLDQRGVGLLHLLQLVPDSVQRPRPFAFRYALPGDSVVTRASLIVFDPARGTAV
                     PVQLPPSIVLYVDPITWNEVRWSADGQRLYVMQSERGGHAFALYQVDPETGTARRLAE
                     EWNATLAEPSLSLGQRDFHPLADGKVIWLSERDGWAHLYLVDGRTGGVIRRLTSGPWV
                     VIRLLRVDEAAGQVYFLAAGREPGRDPYLRHLYRVSFDGTGLTLLTPEDSDHEIGFAP
                     SGRWFVDRYSRWDRPPVTALRSANGETRVELERADVAKLVAAGWRAPERLRLVAGDGR
                     TEIFGNLYRPRGFDFTRRYPVIEEIYPGPQANQAYPWFQAGGNAQALAQLGFVTLQVD
                     GRGTPYRSKAFHDYSYGRLETGGGLEDHVAALGQLARRYPWFDTSRVGIFGHSGGGFA
                     STRAILMYPDVYKVAVASAGNHDQRGYLAIWGESYQGMPAGANYDAQANQSLAGSLKG
                     KLLLMTGDLDDNVHPMLTMRVADALIRANKDFDLMVIPNANHGSAGSPWFIRRRWDYF
                     VRNLLGAEPPRDFRLAPPGR"
     gene            3079..4821
                     /locus_tag="VGA78_15045"
     CDS             3079..4821
                     /locus_tag="VGA78_15045"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HEX9895243.1"
                     /translation="MTLQPGLTLHLSLPTDMRRSVLLACFLLPLVIACGGPTYDVLIK
                     GGTVYDGSGQPGVRADVAIQGDTIAAIGDLPRARGRSTVDATGLAVAPGFINMLSWAT
                     ESLIEDGRSQSDIRQGVTLEVMGEGMSMGPLSDTMKATLKGMQGDIKYDIGWTTLGEY
                     LEFLEKKGSSTNVASFIGATTVRIHEVGFANRVPTSEELDRMRTLVRTAMEEGALGVG
                     SSLIYPPAFFATTEELIELNRAAAPFGGMYISHMRSEANRLLEAVQELIRIAREAGVP
                     AEIYHLKASGQSNWYKMDSVFAMVEAARAEGLKVTADMYTYPAGSTGLDATMPPWVQD
                     GGTAAMLERLRDPAMRRRIAREMNTPTNAWENMLQLTGGTGDGILLVGFTLDSLKPLT
                     GKTLADLARARGRSPAETAMELVYADASATGVSPSAVYFMMDTVNIVKQLARPWVSLG
                     SDGASLAPEGGFLKSSTHPRAYGNFARFLGKYVRDGKVMPLEEAIRRLTRLPAENLKL
                     RQRGALRGGFYADVVVFDPATIQDHATFAEPHQYSTGVQQVFVNGVQVLKDGEHTGAL
                     PGRVVRGPGWKGWD"
     gene            4895..5980
                     /locus_tag="VGA78_15050"
     CDS             4895..5980
                     /locus_tag="VGA78_15050"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9895244.1"
                     /translation="MTDTFELETPVPLVDLDRLERNLDRMARYAAGYGLGLRPHIKTH
                     KATRVAQEQARRGALGLTCATPREAEVMATVTPDILVAHPPVGQKADRLMRLPVNADL
                     MVALDSLEAVENLAEAARRHQRRVRVLVELDLGMHRVGVPVVEQAIALARAVEQRPPL
                     EYWGINFYPGHIRRRQEDQDALLDRLDADLQAGLEKLTQAGVAPRIVSGGSTPTAWHT
                     HRIRGLTEFRPGTYVYQDRSQVAMGVCDRDDCAFTVLATVVSTAVPGQAVVDAGSKAL
                     GREPRDLSSDAGYGELLDQPEVTVKGMSEEHGILDLSRSDWRPRVGDQVRVIPNHVCV
                     VTHMNDVIVGIRGGEVVERYPVEARGR"
     gene            complement(6076..7014)
                     /locus_tag="VGA78_15055"
     CDS             complement(6076..7014)
                     /locus_tag="VGA78_15055"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEX9895245.1"
                     /translation="MACAGPAPSPSTAADTPPEAPPPAWAGLIGDYASGGDTLSVREE
                     AGELQAVFWRDSTNPSDLDQAAVEAAPDGKGIRVTVSGRAFERIALGPAEGNVFRITP
                     RRPVEELRREAQAATPPQESGDFLATDLVELVTLDSTIKQDIRYASTDNFMSEVFYSS
                     PRAFLQRPAAEALVRAHRALAARGYGLLIHDGYRPWYVTRMFWDATPDSLRMFVADPT
                     QGSRHNRGAAVDLTLYDRSTGQPVEMPGVYDEFSPRSFPHYPGGTSRQRWHRELLRQA
                     MEAEGFAVYPAEWWHFDYGEWRRYRIGNLTFETIAR"
     gene            complement(7086..8420)
                     /locus_tag="VGA78_15060"
     CDS             complement(7086..8420)
                     /locus_tag="VGA78_15060"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895246.1"
                     /translation="MTDGRTDGLADSLLRRVAGLLALVATTAATLTAQAPERVTVIRN
                     ATIVPVVGDRIPNGAVVIRGGRIDGVGRDLPAPPGATVVDGTGLFVYPGLIDSGTELG
                     LTEIGSVPGGTDTRELGDLNPHDLALSAVNPHSELIPVTRVNGITSVVTAAGGGLVSG
                     YAALIDLAGWTPQEMGVLPRAAMVITYPRVAGGRFGGGGRGQQSQGADAAGQVNRQVE
                     QLTQFLRNAKAYAERMTRAEAAGSRLDRVDLVLEAMVPVIQGKVPVIFDVRTVEQIRG
                     ALALADSFALKPIIRGGAEAWQLADDLAARKVPVIVGPTTVAPTDNDPYDMVYANPGM
                     LAKAGVQIAFQTAGAADSRNLPYNVALSVAYGLDPEEALRAVTINPARIWGVADQLGS
                     IERGKVANLIVTTGDPLDVRTQIRHVFVRGVEQPMNDRHTRLYEQFKARPKP"
     gene            complement(8417..9817)
                     /locus_tag="VGA78_15065"
     CDS             complement(8417..9817)
                     /locus_tag="VGA78_15065"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895247.1"
                     /translation="MRCKSPGASFISVFLLLGLTRPALAQQPVVGWDSTAGALAVPVP
                     PAGRLVAITNATILTAARGTIEKGTILIRDGKIAAVGPDVTVPAGAEVIDGTGRFVTP
                     GIIDAHSHSMAEAINEGALSSTAMVRIEDVLRQDAPSIYRMLAGGVTTINVLHGSANT
                     IGGQNAVIKLRWGLPVDSMLFAGAPPGIKFALGENVRRTNSNPLPGRARRYPFSRMGV
                     EQYLRDRFTRAREYQVEWKRHEAALKDRKRNDPEPIPPRRDLELDALVEILEGKRLVH
                     AHSYRSDEIVMLLGVARDFGFKIASLQHVLEGYKVADEIVASGAGASTFADNWAYKLE
                     AWDAIPHNAALMAERGVTVTINSDSDERARRLYQEAAKAIKYGGASEDEAIRMITLNA
                     AKQLGVADRTGSIEIGKDADLAIFSAHPFSPAARVEMTLVDGRRFFDRNKAPTLEALM
                     ATIKARRNVPATGGMQ"
     gene            complement(9814..>10236)
                     /locus_tag="VGA78_15070"
     CDS             complement(9814..>10236)
                     /locus_tag="VGA78_15070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895248.1"
                     /translation="EVGKIANLVVSTGPLLADSSRISAVFVDGEQFQVAGGEPASAAG
                     TWSLTTNSPQGAMESTLTLLQDGTSLTGTLASDMMGSTPIRDGRITGRRISWSATVSL
                     GGNSFTLTYTGELSGTRMQGTVAAGEFGSFPFTGEKRP"
BASE COUNT         1613 a         3493 c         3434 g         1696 t
ORIGIN      
        1 cgggatgcgg tgtccctggt tgtcgtaccg ggtggcggcg aacggctcga gcccgggcca
       61 cagatggatc gacgagcggg tcatgcctaa cggcaggaag acttccgagc gcatgaaatc
      121 gggataggag accccgctgg cccgctcgat gatccagtcg atgatgccga agcccaggtt
      181 gctgtattgc caggcggagc cggggggata ggtggtgatg gcataccggg cgatcgcctc
      241 gtccatcgtg ggcacccggt ccaccgcgcc gtcgtaatag aacacgtagt gcagcggcag
      301 ccccgccgtg tggttcgcca cccgccgcac cgtggctgcg gccgcgtccc ccgccagacc
      361 cgtgatcttg ccggaaccca ggtactcgtt ggccggccgg tccagttgca ccttgccccg
      421 ctcgaccaga atcatcagtc ccgtggcggt gatgggcttg gagatcgagg ccagggaata
      481 ggtggtgtgc tcggtcgccg gaatccgctg ttcccggtcg gcccagccga agccctcggc
      541 ccagatgatc ttgccgcctt tcgccaccgc caccgcgagc gacgggacgc cgctgtcgct
      601 caccgcggac cgggcatgcg cacggacggg ggcgaaggga tcggtggccc cgcgctgctg
      661 ggctgtgagc gacggtgtcg accagacgga aaggccggaa caggcgaaga cggcgatggc
      721 ggcgagtcgt gtcatgctgc aatattgtat gcaggattgt gttcagcgca acaacgccgt
      781 tcacctctta ccctgctcca tgccactact cgcgctcctc ctgctgcagc tgccggcggc
      841 cccgctgacg gtggaccatt accgccgcgc cgaacagttc ctcgccgcca acgcggagcg
      901 gttggtcttt cacaaccggg tgacgccccg ctggattgcg gggagcgacc gcttctggta
      961 ccgggtgcgg accggagacg ccagctaccg cttccgcctg gcggatccgg cccgtcgctc
     1021 cgtgaccgat gcgttcgatc acgttcgtct ggccaccgca ttgggtgctg cgtccggcgc
     1081 cgcggtccgg gccgactcgc tgccgttcga cacgatcgct tggtcggccc ggggggacag
     1141 cctcaccgtt cccatcgggg ccaaacgctg gcgctgtagt ctcgggcgct ggagctgtgt
     1201 cgaggccgcc ccgccccgga gccccgagcc aggggctgcg tggtcgcccg acagttccat
     1261 gcgtgtggtg cgggtgggcg gcgacctggg cctcaggcgc ggcgccgata ccaccaccgc
     1321 ccgtctcacc agcgacgccg agcccgaata cgactacggc tccatgccgg gcaattcgac
     1381 atactatgtc tcctcgctcc ggaccggcgc ggtggccccg ccggctgtgc tctggtcgcc
     1441 cgacggccgc cggttcgtga gctaccgcct cgaccagcgc ggcgtgggcc tgctgcatct
     1501 cctgcagctg gtcccggaca gcgtccagcg gccccggcct tttgcgtttc gctacgcgct
     1561 cccgggagac tccgtcgtga cgcgggcctc gctcatcgtg ttcgatccgg cgcgggggac
     1621 cgccgttcca gtgcagctcc cgccgtccat cgtcctctat gtcgatccca tcacctggaa
     1681 cgaggtccgc tggagcgccg acgggcagcg gctgtacgtg atgcaaagcg agcggggggg
     1741 ccacgccttt gcgctctacc aggtggatcc ggagacgggc acggcccgcc gcctggccga
     1801 ggagtggaat gccacgctgg ccgagccgtc gctcagcctg ggacagcgcg atttccaccc
     1861 gctggccgac ggcaaggtca tctggctttc cgagcgcgac ggctgggccc acctgtatct
     1921 ggtggacggc cggaccggcg gcgtgatccg gcggctcacc tccggcccct gggtggtcat
     1981 ccgccttctt cgcgtcgatg aggccgcggg ccaggtgtac ttcctggcag cggggcgcga
     2041 accgggacgc gatccgtatc tacggcacct ctaccgggtg tcgttcgacg gaaccggact
     2101 tacgctcctc accccggagg attccgatca cgaaatcggg ttcgcgccct cgggccgctg
     2161 gttcgtggac cggtactcgc gctgggatcg gccgccggtc actgcgcttc gctcggcgaa
     2221 tggcgagacg cgggtggagc tggaacgggc cgatgtggcg aagctggtgg ccgcgggatg
     2281 gcgggctccc gagcggcttc gcctcgtggc cggggatggc cggaccgaga tcttcggcaa
     2341 tctctatcgg ccccgcggtt tcgacttcac ccggcggtac ccggtcatcg aggagatcta
     2401 tcccggtcca caggcgaacc aggcgtatcc ctggttccag gcgggcggca acgcccaggc
     2461 cctggcccag ctgggattcg tcaccctgca ggtggacggc cggggaacgc cctaccggtc
     2521 caaggccttt cacgactatt cctacggccg cctcgagacc ggcggcggcc tcgaggacca
     2581 cgtggcagcg ctggggcagc tcgcccgccg ctacccgtgg ttcgatactt cccgggtcgg
     2641 gatcttcggg cactccggcg gcggcttcgc gtccacccgg gccatcctca tgtatcccga
     2701 cgtgtacaag gtggccgtcg cgtcggccgg taaccacgat cagcgcggct atctggccat
     2761 ctggggcgag tcgtatcagg ggatgccggc cggagcgaac tatgacgcgc aagccaacca
     2821 gtcgctcgcg gggagcctca agggcaagct gctgcttatg acgggcgacc tggacgacaa
     2881 cgtccacccc atgctcacca tgcgggtggc cgacgcgctc atccgggcca acaaggactt
     2941 cgacctgatg gtgatcccga acgccaacca cggctcggcg ggatcgccct ggttcatccg
     3001 gcgccgctgg gattatttcg tgcggaacct gctcggagca gagccgccga gagactttcg
     3061 actcgcccca cccggacgat gacgctccag cccgggctca cccttcacct ttcactcccg
     3121 accgacatgc gccgctccgt tctgctcgcc tgcttcctgc tccccctggt gattgcctgc
     3181 gggggtccga cctacgacgt cctgatcaaa ggcggtaccg tctacgacgg gtcgggccag
     3241 cccggcgtgc gggccgacgt ggccatccag ggcgacacca tcgccgccat cggtgatctg
     3301 ccccgcgccc ggggccgcag cacggtggac gccaccgggc tcgcggtggc gccgggcttc
     3361 atcaacatgc tctcctgggc taccgagtcg ctcatcgagg acggccgctc ccagtcggac
     3421 atccgccagg gagtcaccct cgaggtgatg ggggagggga tgtccatggg gccgctcagc
     3481 gacacgatga aagcgaccct caaggggatg cagggcgaca tcaagtacga catcgggtgg
     3541 accacgctgg gcgagtacct cgagttcctc gagaagaagg ggagctccac caacgtcgcg
     3601 tcgttcatcg gcgcgaccac cgtgcgcatc cacgaggtgg gattcgccaa tcgcgtaccc
     3661 acatccgagg aactggaccg gatgcggacg ctggtccgga cggcgatgga ggagggcgcg
     3721 ctcggggtcg gctcctctct catctatccc cctgcctttt tcgcgaccac cgaggagctg
     3781 atcgagctca accgggccgc cgcgccattc ggtgggatgt acatctcgca catgcggagc
     3841 gaggccaacc ggctgctcga ggcggtgcag gagctcatcc gcatcgcccg ggaagccggc
     3901 gtgccggcgg agatctacca cctcaaggct tcgggccaga gcaactggta caagatggac
     3961 agcgtcttcg cgatggtgga agcggcccgc gcggaagggc tcaaagtcac ggcggacatg
     4021 tacacttacc ccgccggctc gaccggtctg gatgcgacga tgccgccctg ggttcaggat
     4081 ggcggcaccg ccgccatgct cgaacggctg cgggatcccg cgatgcggag gcgaatcgcc
     4141 cgggagatga acacgcccac caatgcgtgg gagaacatgc tgcagctcac cggcggtacc
     4201 ggggacggca ttctgctggt gggcttcacg ctcgattctc tcaagccgct cacgggcaag
     4261 accctggccg acctcgcccg ggcccgggga cggagcccgg ccgagaccgc gatggagctg
     4321 gtctacgccg acgcgagtgc caccggtgtc tcaccttcgg ccgtgtactt catgatggac
     4381 acggtcaaca tcgtgaagca gctcgcccgg ccctgggtga gcctgggctc tgacggcgcc
     4441 tcgctcgcgc cggaaggcgg ttttctcaag tcgagcaccc atccccgggc gtacggcaac
     4501 ttcgcgcggt tcctcggcaa gtacgtgcgc gatgggaaag tcatgccact ggaggaggcc
     4561 attcgccgtc tgacccggct gcccgcggag aacctcaagc tccgccagcg cggtgcgctg
     4621 cggggcgggt tttatgcgga cgtggtggtg ttcgaccccg ccacgatcca ggaccacgcg
     4681 accttcgccg agccgcacca gtactccacc ggtgtgcaac aggtgttcgt gaacggggtt
     4741 caagtgctca aggacggcga gcacaccggg gcgctgccgg ggcgagtggt gagagggccg
     4801 gggtggaaag ggtgggactg aatgcagaat gcccagtgcc caatgcccat tgaagaattc
     4861 aagcgtctgg ctcagaaccg atgattgatc gccaatgact gataccttcg aactcgaaac
     4921 gcccgttccc ctggtcgacc tcgatcggct ggagcggaat ctcgaccgca tggcccgcta
     4981 cgccgcagga tacggtctgg gtctccgtcc ccatatcaag acccataagg ccacccgggt
     5041 ggctcaggag caggcccggc ggggagcgct gggactcacc tgcgctacgc cccgggaagc
     5101 cgaggtgatg gccaccgtca cgcccgacat cctggtcgcg catccaccag ttggccagaa
     5161 agccgaccgg ctgatgcgac tgcccgtcaa cgcggatctg atggtcgccc tcgactcgct
     5221 cgaggcggtg gagaacctgg ccgaggcggc ccgccgccat cagcggcgcg tccgggtgct
     5281 ggtggagctc gacctcggca tgcatcgggt cggcgttccc gtggtggaac aggcgatcgc
     5341 gctcgcccgg gcggtggagc agcgcccccc gctggagtac tgggggatca acttctatcc
     5401 gggccatatc cggcggcgcc aggaggatca ggacgcgctg ctggatcggc tcgatgccga
     5461 tttgcaggcc gggctcgaga agctgaccca ggccggggtc gcgccccgca tcgtgagcgg
     5521 agggtcgacg cccactgcct ggcacaccca ccgcatccgg gggctgacag agttccgccc
     5581 cggcacctac gtctaccagg accgttccca ggtggcgatg ggcgtctgtg accgggacga
     5641 ttgcgcgttc acggtgcttg cgacggtggt gagcaccgcg gtgccgggac aggcggtcgt
     5701 cgatgccggt tcaaaggccc tcggtcgcga gccgcgcgat ctgagctccg acgccggcta
     5761 cggtgagctg ctggaccagc ccgaggtcac ggtgaagggc atgtcggagg agcacggcat
     5821 tctcgatttg agccggagcg actggcggcc ccgggtcgga gaccaggtcc gggtgatccc
     5881 caaccacgtg tgtgtggtga cccatatgaa cgacgtgatc gtgggcatcc ggggcgggga
     5941 ggtggtggag cgatatccgg tggaggcgag ggggcggtaa tccattgacg attgacgatt
     6001 gacaattgac cagtgcatgc ggtgatcgcg gcttggtgta atcatcaatc gtcaattgtc
     6061 aatcgacaat gaagttcagc gagcgatggt ctcaaaggtg agattcccga tccggtacct
     6121 ccgccactcg ccgtaatcga agtgccacca ctccgccggg tacaccgcaa acccctccgc
     6181 ctccatcgcc tgacgcaaca gctcccggtg ccagcgctgg cgtgaggtgc cgccggggta
     6241 gtggggaaac gaccgcggcg agaactcgtc gtagaccccc ggcatttcga ccggctgtcc
     6301 ggtcgaccga tcgtagaggg tgagatctac cgcggcgccc cgattgtggc gcgatccctg
     6361 ggtgggatcg gccacgaaca tccggagcga gtccggcgtc gcatcccaga acatccgagt
     6421 cacataccag ggacggtagc cgtcatggat caacaggccg tacccccgag ccgcgagcgc
     6481 gcggtgggcc cggaccaggg cttcggccgc gggtcgttgc aggaaggcgc gggggctgga
     6541 gtagaacacc tcgctcatga agttgtcggt cgaggcgtac cggatatcct gcttgatggt
     6601 cgaatcgagc gtcaccagct ccaccagatc cgtggcgagg aagtcgccgc tctcctgggg
     6661 cggtgtggcc gcctgcgcct cacgccgaag ctcctccacc ggccgccgcg gagtgatccg
     6721 gaagacgttt ccctccgccg gccccaacgc gatgcgctcg aaagcccggc ccgacaccgt
     6781 gacccggatc cccttaccgt cgggcgcggc ttctacggcg gcctggtcca gatcgctcgg
     6841 gttggtcgag tcgcgccaga agaccgcttg cagctctccg gcctcctccc gcaccgagag
     6901 cgtgtcgccg ccgctggcat agtccccgat gagcccggcc cacgccggcg gtggagcctc
     6961 cggcggcgtg tccgccgcgg tcgagggtga cggagccgga ccagcacacg ccacggacga
     7021 caaaagggcc aggcaccgcc tggcccgaag tgaacggcag aaagaccgca tgagacctct
     7081 ggcgactagg gttttggcct ggccttgaac tgctcgtaca gccgggtgtg ccggtcgttc
     7141 atcggttgct ccactccgcg gacgaacacg tgccggatct gggtccggac gtcgagcgga
     7201 tcgccggtcg tgacgatgag gttggccacc tttccacgct cgatgctgcc gagctgatcg
     7261 gccacgcccc agatccgggc cgggttgatg gtcaccgccc gcagcgcctc ctcggggtcg
     7321 agcccgtagg ctaccgacag cgcgacgttg tacggcagat tgcgtgagtc ggccgccccc
     7381 gccgtctgga aggcgatctg cactccggcc ttggccagca tgcccgggtt ggcgtacacc
     7441 atatcatagg gatcgttgtc ggtcggggcg acggtggtcg gccccacgat caccggcact
     7501 ttgcgggccg cgaggtcgtc cgccagctgc caggcctccg cccctccccg gatgatgggc
     7561 ttgagggcga acgaatcggc cagcgccagc gcgccgcgga tctgctccac agtgcgcacg
     7621 tcgaaaatca ccggcacctt gccctggatc accggaacca tcgcctccaa caccagatcg
     7681 acccggtcga gtcgcgagcc tgccgcttcg gcacgggtca ttcgctcagc gtacgctttc
     7741 gcgttccgga gaaactgggt gagctgctcc acctggcggt tgacctgccc cgccgcgtcg
     7801 gcgccttgac tctgctgccc ccgccccccg ccgccaaaac ggccaccggc cacccgagga
     7861 taggtaatca ccatggcggc acgcgggagt acgcccatct cctgtggcgt ccaaccggcc
     7921 aagtcgatca aggccgcgta gccgctcacc agtccgccgc cggccgccgt gacgacgctg
     7981 gtaatcccat tcacgcgcgt caccgggatc agctccgagt gcgggttcac cgcggagagg
     8041 gccaggtcgt ggggattgag atcgcccagc tcgcgggtgt cggtccctcc cggcaccgag
     8101 ccgatctcgg tgagtcccag ctcggtgccc gagtcgatca gaccgggata gacgaagagt
     8161 cccgtcccgt cgaccacggt ggcgcccgga ggagctggca ggtcgcgccc cactccgtcg
     8221 atccggccgc cccgaatgac gaccgcgcca ttggggatcc gatcgcccac cactggaacg
     8281 atcgtggcgt ttcggatgac ggtaacgcgc tccggtgcct gggccgtgag cgtagctgcg
     8341 gtagttgcaa ccaaggccag caagcccgcg acccggcgga gtagactgtc cgccagaccg
     8401 tccgtccgtc cgtccgtcat tgcatgcccc ctgtcgccgg cacgttccgt cgcgccttga
     8461 tggttgccat gagtgcctcg agcgtcggcg ccttgttccg gtcgaagaac cggcgtccat
     8521 cgaccagcgt catctccacc cgcgcggctg gagagaaggg atgggcgctg aagatcgcca
     8581 ggtccgcgtc tttcccgatc tcgatcgagc cggtccgatc ggcgacgccc agctgtttgg
     8641 cggcgttcag tgtgatcatc cggatcgctt catcctccga ggccccgccg tatttgatcg
     8701 ccttggccgc ctcctgatag agccgtcggg cccgctcgtc cgagtcggag ttgatggtga
     8761 cggtcacgcc ccgttcggcc atcagggcgg cgttatgggg aatggcgtcc caggcttcga
     8821 gtttgtaggc ccagttgtcg gcaaaggtcg aggcgcccgc gccggaggcc acgatctcat
     8881 ccgcgacctt gtatccctcc agcacgtgct gcaggctggc gatcttgaag ccgaagtccc
     8941 gggccacccc cagcagcatc acgatctcgt cgctgcgata ggaatgggcg tggaccagcc
     9001 gcttgccttc caggatttcg accagcgcat cgagctcgag atcgcgccgg ggcggaatcg
     9061 gctccgggtc gttccgcttc cggtccttga gggcagcttc atggcgcttc cactcgacct
     9121 ggtactcccg cgccctggta aaccggtcgc gtaggtactg ctccactccc atgcggctga
     9181 agggatagcg ccgcgcccgg cccgggagcg ggttgctgtt ggtgcgccgc acgttctcac
     9241 ccagcgcgaa cttgatcccc gggggtgcgc ccgcgaagag catgctgtcg accggcaagc
     9301 cccagcgcag tttgatcact gcattctggc cgccgatggt attggccgat ccatgcagca
     9361 cgttgatagt ggtgaccccg ccggccagca tccggtaaat ggacggcgcg tcctgccgca
     9421 gcacatcctc gatccgcacc atcgcggtgc tcgagagcgc accctcgttg atcgcttcgg
     9481 ccatgctgtg cgagtgtgca tcgatgatgc ccggggtgac gaaccggccg gtgccgtcga
     9541 tgacttcggc gccggccggc accgtcacgt cgggccccac ggcggcgatc ttgccgtcgc
     9601 ggatcagaat ggtgcccttc tcgatggtgc cccgtgccgc cgtgagaatg gtggcattgg
     9661 tgatggctac cagccggccg gccggcggca ccggcaccgc gagcgcgccg gccgtcgaat
     9721 cccagcccac caccggttgc tgtgccaggg ccggccgcgt cagacccagc agcaggaaaa
     9781 ccgagatgaa cgaagcccct ggtgacttac atctcatggc cgtttctctc cggtgaaagg
     9841 gaaggaaccg aactcacccg ccgctaccgt cccctgcatc cgcgtgccgc tgagttcgcc
     9901 ggtgtaggtg agggtgaagc tgttcccccc gagggagacc gtcgcgctcc agctgatccg
     9961 ccgtccggtg atccggccgt cgcgaattgg ggtggacccc atcatgtcgc tcgccagcgt
    10021 accggtgaga ctggtgccgt cctgcagaag tgtgagcgtg gattccatcg ccccctgagg
    10081 cgaattggtc gtgagcgacc aggtccccgc cgccgaggca ggctcaccgc ccgccacctg
    10141 aaactgctcc ccatcgacaa agaccgcgct gatccggctg ctgtccgcca gcaacggtcc
    10201 ggtcgagacc accaggttgg cgatcttgcc gacttc
//
LOCUS       DASWKS010000525         1555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1780409, whole genome shotgun sequence.
ACCESSION   DASWKS010000525 DASWKS010000000
VERSION     DASWKS010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780409"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VGA78_15075"
     CDS             complement(<1..180)
                     /locus_tag="VGA78_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895249.1"
                     /translation="MPGARAQQRSGGGLTTVHIWMIVFVVLWLISTVAFIVLFTKQED
                     LNALNIRLEADNQRLI"
     gene            562..>1555
                     /locus_tag="VGA78_15080"
     CDS             562..>1555
                     /locus_tag="VGA78_15080"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX9895250.1"
                     /translation="MVLAATVLASGSGCSFIQSLFSPKPLPRPRPVVQQIPIQAAPDP
                     VTASSPAGIDHFGVLPEHDDVPFVGRAAGAFQQHTFTHVGVDIDPDIDASGQWLVFAS
                     TRHAARPDLYMKSVTGRAVTQLTSDPAGDVQPAFSPDGTRVAFASDRAGSWDIWALEI
                     IAGRPVQITRDAGHEVHPSWSPDGRFLVYSAVPERGGEWELWIVDLSRPATKKSIGSG
                     LFPRWSPTGEAIAFQRARRRDSQLFSIWTVMLIDGEPLRPTEIVSAPDHALITPAWSP
                     DGRRLAYCAVTGPRERPESQDHRPSDIWLVEIDGSNPIRLTEGDGYHYTPTWSRD"
BASE COUNT          269 a          481 c          514 g          291 t
ORIGIN      
        1 gatcaaacgt tggttgtctg cttccaggcg gatgttcaac gcgttcaggt cttcctgctt
       61 ggtgaacagg acgatgaagg cgaccgtcga gatcagccac agcacgacga agacgatcat
      121 ccagatatgt acggtagtca ggccaccgcc tgaccgctgc tgagcgcggg caccgggcat
      181 cagaagattc ctccaggtag tttaaacgcc caggtagctt gaatgccggg gcaacaattc
      241 aggttggcca tcccacggac caagccgggt aacggggcgg ggtcacaagt cccttagcga
      301 tccaaatata gaccgaggtc gattatcccg cccaccggtg gtggtgtcaa ggatcgggga
      361 tcgatccctg gcgctgctcg gagctcagcc gcggtcgtga agatgaccaa taattcgttt
      421 tcgggtgccc gtgagccgat aagtagaacc cgggagggaa gcaggtagtc gcgaatgcgc
      481 gccgggtggg gtcgatacgc cgttcgcggg agatccagat cgatgcggtg gccggtggac
      541 tggatacaac gtcggtggtt gatggtcctg gcggcgaccg tcctggcgag tggttcgggc
      601 tgctccttta ttcagtccct cttctcgccc aagccgctgc cccgccccag accggtggtg
      661 cagcaaattc cgattcaggc cgctccggac ccggtgacgg cgtccagtcc ggccggcatc
      721 gaccacttcg gcgtgctccc ggagcacgat gacgtaccgt tcgtgggccg ggccgccggg
      781 gcgtttcagc aacatacctt tacccacgtc ggggtcgaca tcgacccgga tatcgatgca
      841 tcgggccaat ggctggtgtt tgcttcgaca cgtcacgccg cgcgcccgga cctctacatg
      901 aagtcggtca ccggccgagc cgtcacccag ttgacgagtg atcccgccgg tgacgtgcaa
      961 cccgcctttt ctcccgacgg gacgcgggtg gcgttcgcca gcgatcgcgc cggttcgtgg
     1021 gacatttggg ccctcgagat catcgccggt cggccggtgc agattacgcg cgacgccggg
     1081 cacgaagtgc acccgtcctg gtcgcccgac ggtcggtttc tggtttacag cgccgtgccg
     1141 gaacgggggg gcgagtggga gctgtggatc gtcgatctga gccggcccgc gacgaaaaag
     1201 tccatcgggt ccgggctgtt tccgcgctgg tcgccgaccg gcgaggcgat cgcctttcag
     1261 cgagcccgcc ggcgggacag ccaactgttc agtatttgga cggtcatgct gatcgatggc
     1321 gaaccgcttc ggccgaccga aatcgtctcc gcgccggatc atgccctgat tacaccggcc
     1381 tggtcgccgg acgggcggcg cctcgcctat tgcgccgtga ccggtccccg tgagcgaccg
     1441 gagtcgcagg atcatcgtcc cagtgacatc tggctcgtcg agatcgacgg gagcaatccg
     1501 attcggctga ccgagggtga cggctatcac tatacgccga cctggtcgcg tgacg
//
LOCUS       DASWKS010000526         3851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2154127, whole genome shotgun sequence.
ACCESSION   DASWKS010000526 DASWKS010000000
VERSION     DASWKS010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2154127"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VGA78_15085"
     CDS             complement(<1..671)
                     /locus_tag="VGA78_15085"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9895251.1"
                     /translation="MRRRRSKGILQWTLVGLLLIGPGYSNVKALIDARRFPPPGKLID
                     VGSHRLHLDCQGNGTPTVMLEAGAGAWSLAMRRLQDALRDSVKVCSYDRAGLGWSDPS
                     SAGFDVASSVAELRMLIDSAGITKPVVLVGHSLGANIAQVYAASHPGDLAGIVLLDPG
                     TPDDLLEDFTGTDSAALAITSCGWKCTLASATAWFGVVRFITRNAGRKTLLGEDGSAY
                     RAALAR"
     gene            802..1842
                     /locus_tag="VGA78_15090"
     CDS             802..1842
                     /locus_tag="VGA78_15090"
                     /inference="COORDINATES: protein motif:HMM:NF039924.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5937 family protein"
                     /protein_id="HEX9895252.1"
                     /translation="MVHFHLVPNGLAGIQLAYSPIWECLISIRRAQARTCHPLHRAWA
                     DQVRPAISRAGLELLPVLVRPGGYIPDFLAPPPAGPSRGFQEELEQLRLTPLALMRAD
                     LTRAARGSNGADVQDLLGRYVGREPALLRALVLELEHCWACLLDRHWPRLEAFLAGEV
                     LRRAHQLACKGPAEALAAMHPAIKWRANGLQVDHTGRKRIARVGTEGLLLVPSVFAWP
                     DVFTVTDRPWRLSIYYPAGGAGDWFDPPAPLRGDPLAALVGRSRARVLRHLSVPVTTL
                     ELAARLQVRPSAVSRHLTGLATAGLANRVRIGKRVVYSPGLALRSLLDLIDSANSSRL
                     VPPDLADPGHGA"
     gene            complement(2039..2308)
                     /locus_tag="VGA78_15095"
     CDS             complement(2039..2308)
                     /locus_tag="VGA78_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895253.1"
                     /translation="MRIPIASFRRCTSVTDKDGATGCAALTLTVMYQQVSIDVTPAGN
                     PNVVSLKNRRLLPVAILSTATFDARDMDPTTVTLGNWRSSSRCSA"
     gene            2480..3568
                     /locus_tag="VGA78_15100"
     CDS             2480..3568
                     /locus_tag="VGA78_15100"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEX9895254.1"
                     /translation="MILLALFLALTLAPDVRATARQAGGTALPQESADSGAFVVRLGT
                     DTLSLERYTRRANRLEAVAVGRSPRTVISHLVMTLGPDGSIATVAAGRGGQTLEERAP
                     AVAGTIPLVGGFWLPWELALRRAQAADRDSTVVNLLAGGNARPTTFRRTGPGRFTFLN
                     QFDQVLHARIDSRGRLLSLEIEGGGSTVERVAWLDVDAMARTFSARDSAGRGLGPLSP
                     RDTTMADVHGARIALAYGRPSLRGRSLDVLVPPGQVWRAGSNDASTITTDRRLQFQGY
                     TLAPGSYSMFVLAEAGKWTLILNRQTGMSGLERDPAQDLARIAMQTRTNAPATEKLTI
                     EAAAKADGGGLVFRWGPVEAVAGFRVAQ"
     gene            3565..>3851
                     /locus_tag="VGA78_15105"
     CDS             3565..>3851
                     /locus_tag="VGA78_15105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895255.1"
                     /translation="MIFRVRRRAMVTVLGLILVAGAAPELATAQSAPIPTPASVLGFA
                     VGADFKLATYDESLRYFQQLAKASDRVKLLDVGRTSTGHEWVLAVISSPANL"
BASE COUNT          609 a         1306 c         1236 g          700 t
ORIGIN      
        1 cgcgcgaggg cagcccggta cgcgctccca tcctccccga gaagggtctt tctgccggcg
       61 ttccgagtta tgaaccttac gacgccgaac caggcggtgg ccgacgccaa ggtgcatttc
      121 catccacacg acgtaatggc gagcgcagcg gaatcggtcc cggtgaagtc ctccaggaga
      181 tcgtccggag tcccggggtc gaggaggacg ataccggcca gatcgccagg gtgggaagcg
      241 gcatatacct gggcgatatt cgcccccaga gagtgcccca ccagcaccac gggctttgtg
      301 atcccggcgg agtcaatcaa catccgcagc tccgctaccg agctggccac gtcgaacccg
      361 gcgctggaag gatcactcca gccgaggcca gcccgatcgt acgagcatac cttcactgaa
      421 tcacgcaacg cgtcctgcaa ccgccgcatc gcaagggacc aggccccggc tccagcttcc
      481 aacatcacgg tgggggtacc gttgccctga caatccagat gcagccgatg gctgccgacg
      541 tcgatcagtt tcccgggggg aggaaaccgg cgggcatcga tcaaggcttt cacgttgctg
      601 taacccggcc cgatcagcag gagcccaacc agcgtccact gtagaatacc tttcgaacga
      661 cgtcgccgca ttcctggaac ctcttgctct gggtggtcgt cagggttgtc ccggacggcg
      721 ttaatgcgcc cccagggtga ccttctcggg ccgaatttcc ttgggcccgc ggtgactggc
      781 ccctgactcc cggatgggta aatggtccac ttccacctgg ttcccaacgg cctcgccggc
      841 attcaattgg cctatagccc gatctgggaa tgcctcatca gcattcgccg cgcgcaggca
      901 cgcacatgtc atccgcttca tcgtgcctgg gctgatcagg ttcgacccgc cataagccgg
      961 gcagggctcg agttgttgcc ggtgctggtg cgtccgggcg gctacatccc cgatttcctt
     1021 gcgccaccac cagccggtcc cagccggggt tttcaggagg agctcgagca gcttcgtctc
     1081 acgccactgg cgctgatgcg tgccgacctg acacgtgccg cgcgggggtc caacggagcc
     1141 gatgtccagg acttgcttgg caggtacgtc ggtcgcgaac ccgccctcct tcgggcgctc
     1201 gtgctcgagt tggagcactg ctgggcatgc ctgctcgatc gccactggcc ccgtcttgag
     1261 gcatttctcg ccggcgaagt gctccgtcga gctcaccaac tcgcctgtaa ggggccggcc
     1321 gaagctctgg ccgccatgca cccggcgatc aagtggcgag ccaacggact ccaggttgac
     1381 cacaccggtc gcaagcgtat tgcgcgggtg ggtacagagg ggctgttgct tgttccctcc
     1441 gtcttcgcgt ggcccgatgt gttcacggtc acggatcggc cttggcgcct cagtatctac
     1501 taccctgccg gcggtgccgg agactggttc gacccacccg ccccgttgcg gggcgacccg
     1561 ctggcggcgc tggttggacg aagccgggcc cgggtgttgc gtcacctgag cgtgccagtc
     1621 acgacactcg agctggctgc tcgtctccag gtacgcccga gcgcggtttc ccgtcatttg
     1681 actgggctgg ctaccgcagg cctggccaac cgggttcgta ttggaaagcg cgtcgtctat
     1741 tctccgggat tagcccttcg aagcctgctg gatcttatcg actccgcaaa ttcaagccgt
     1801 ctggttccgc cggatctcgc ggatcccggc cacggcgcct gaacaaatag aacggtcggt
     1861 ccggggtcga aaacgattct caattctgcg aatgaatcgg gtttagctca cgtcaaccgc
     1921 tttcggcccc gtcggctggc tgtgctgacg caggcgactg ctccggcggc aagtgttagg
     1981 accctgagtg cccgggagcc ttcccggtac tgttcggcgg tcgaagacag ccgctctttt
     2041 aagcactgca ccgggaagaa gagcgccagt tcccgagcgt cacggtcgtg gggtccatgt
     2101 cccgcgcgtc gaaggttgcc gtgctcagga tggccaccgg caggagcctc cggttcttga
     2161 ggctcaccac gttcggattg ccagccggcg tgacgtcgat cgacacctgc tggtacatca
     2221 cggtgagggt cagggcggca cagccggtgg cgccgtcctt gtcggtcacc gaggtgcagc
     2281 gccggaaact ggcgatggga attcgcatgg cgacggtctc cccctcggtt cgtgcgggtc
     2341 tgctcgggca tggatgtccg caattcccaa cctagccctg ggtggacggg acggtctaga
     2401 ggagcctgag tgagccccgg ccgatcccgc cgttcctgag ggatggtatt ttgacaacct
     2461 ctctccaagg cactgccata tgatcctgct cgcgctcttt ctcgccttga ctctcgctcc
     2521 cgacgtccgt gcgacggccc gtcaggccgg cgggacagcg ttgccccagg agagtgccga
     2581 cagcggcgcg ttcgtggtgc gcctgggcac cgatacgctc tcgctcgagc gctacacccg
     2641 ccgggccaat cgcctcgagg ccgtcgctgt cgggaggagc ccgcggaccg tcatttcgca
     2701 tctcgtgatg acgctcgggc cggacgggtc gattgccacc gtcgccgccg gccgaggtgg
     2761 ccagacgctg gaggaacggg cgcccgccgt cgcggggacg atcccgctgg tcggaggctt
     2821 ctggcttccc tgggaactgg cgctccgccg ggcccaggcc gccgatcggg acagcacggt
     2881 cgtcaatctc ctggcgggag gcaacgctcg gcccaccacc ttccgccgca ccggtcccgg
     2941 ccgcttcacc ttcctgaatc agtttgatca ggtcctgcat gcccggatcg attcgcgcgg
     3001 ccgcctgctc tcgctcgaga tcgagggtgg cgggagcacg gtggagcgag tggcgtggct
     3061 cgacgtcgac gcgatggccc gtactttctc cgcccgcgac agcgccggcc gaggactggg
     3121 accgctctcg ccgcgcgaca ccaccatggc cgacgtccac ggcgcccgca tcgctttggc
     3181 ctacggccgt ccgtcgcttc gaggccgctc gctggacgtg ctggtcccgc ctgggcaagt
     3241 gtggcgggcc ggctcgaacg atgccagcac catcaccacc gaccggcggc tgcagttcca
     3301 gggctacact ctcgcgccgg ggagctacag catgttcgtg ttggcggaag cagggaagtg
     3361 gaccctcatt ctcaaccggc agaccggaat gagcggcctt gaacgggatc cggctcagga
     3421 tctggcgcgg attgcgatgc agacgcgcac caacgcgccg gccaccgaga aactcaccat
     3481 cgaagcagcc gcgaaagccg atggcggcgg gctggtcttc cgctggggac cggtcgaagc
     3541 agtcgccgga ttccgagttg cacaatgatt ttcagggtcc gtcgccgcgc catggtgacc
     3601 gtcctcggcc tgatccttgt cgccggggcc gctccagaac tggcaaccgc ccaatccgcc
     3661 ccgatcccaa cccccgcctc ggtcctcggc tttgcggtcg gcgccgactt caagctggcg
     3721 acctacgacg agtcgctgcg gtatttccag cagctcgcca aggcgagtga ccgggtcaag
     3781 ctgctcgacg ttggccggac gtccacgggg cacgagtggg tcctggccgt gatttcctca
     3841 ccggccaacc t
//
LOCUS       DASWKS010000527         6139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2512590, whole genome shotgun sequence.
ACCESSION   DASWKS010000527 DASWKS010000000
VERSION     DASWKS010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2512590"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1209
                     /locus_tag="VGA78_15110"
     CDS             <1..1209
                     /locus_tag="VGA78_15110"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX9895256.1"
                     /translation="DRDHAALRRALRAALATAGRGRFTIGAAHEDVHSAVEDWLTREV
                     GEAGARVHTGRSRNDQVACDLRLYLKDTLLELHGAGTRLAAGLVDFAARHRTALWPGY
                     THQRRAMPSSAGLWAAGLAETLITALEAVGPLWARVDRSPLGTAAGYGVPLPLRREAA
                     MRALGFASLDQAVTTTQLSRGQLETAVLAWCVDLAHAASRCAADVVLLSSEEFGFLVL
                     PPELATGSSIMPQKQNPDLFELTRARAAALDGDLAAVLQLKGKLTSGYHRDFQLLKEP
                     LFRGLDRTGEMLVMMAHAVPRLAVDRERGMAALRGDALVTDEVMRRVEAGQPFRSAYR
                     AVAAEVKEGVIFLVPSAADLVRRRRSTGGLGNLGLPGFRGRVAALRRWERRERTRFDR
                     AMAHLAGRTR"
     gene            1206..1652
                     /locus_tag="VGA78_15115"
     CDS             1206..1652
                     /locus_tag="VGA78_15115"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895257.1"
                     /translation="MTANRKQRLLRILELIATRRIRTQEELADGLRRDGWEVTQSSVS
                     RDITALGLVKVEGAYARPPANELRGVDPNELRIRDGVLQYEPAGDALVVVRTPPGEAN
                     RVAVAIDRLAWPEVVGTLAGDDTIFIAARDGAGQKGAIQRISRLAR"
     gene            complement(2671..3666)
                     /locus_tag="VGA78_15120"
     CDS             complement(2671..3666)
                     /locus_tag="VGA78_15120"
                     /inference="COORDINATES: protein motif:HMM:NF024869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC/CoxI family protein"
                     /protein_id="HEX9895258.1"
                     /translation="MRDVLQDLERLAADGPVGRAVVTRVWGSAPRIEGSNLIATADGR
                     MAGSVSGGCVEGAVVTAIGEAIRSRESKLIEFTVTHERAWEVGLACGGSIAVFVEPEV
                     RPELLAAATGPGGVVVPSVIGGAAPLGRPDPAVAGAVADASKAALEALNSRTVTVPTP
                     AGEATVFLEVFPKQPTLFLIGAVHVAEELTRLAKPLGYRVVVADGRGGFLTPERFPDA
                     DLLVQEWPEDAFKQVGIDDATCVCVLSHDPKFDEPALDFALRSPARYVGAIGSRKTQE
                     ARRARLRAAAYSEEEIARLHGPIGLDLGGRHPGEIALAILAEVTAVRYGKTGERR"
     gene            complement(3807..4202)
                     /locus_tag="VGA78_15125"
     CDS             complement(3807..4202)
                     /locus_tag="VGA78_15125"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HEX9895259.1"
                     /translation="MNDPPIVYFDGVCGLCNRFVDFLLRHDRHHRLRFAPLQGRTAAE
                     RLGKTKGIDPTTIVLEAEGRMLDRSSAVLGVFHHLGGGWRATGLLRVVPRRLRDLIYD
                     WIARHRYGWFGKREVCRLPTAEERSGFLP"
     gene            complement(4199..4837)
                     /locus_tag="VGA78_15130"
     CDS             complement(4199..4837)
                     /locus_tag="VGA78_15130"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX9895260.1"
                     /translation="MPLPPVAAIILAAGLCRRFGSAKLLALWRGRPIVAHVMDRVAAA
                     RDDGILTGAVVVHRPDDLETPRLAREWGLEPQLNPRPANGMASSLRVGLTALIAERWQ
                     PLEGAMVVLGDQPLLRGEVVEALVKAFRPSMDLVRPQYAGDPSATPGHPTIVHRRVWD
                     RARSLTGDQGFRVLATWGNVRLGTITVPGVNPDVDTPQDLQMLEGQAEENSR"
     gene            complement(4838..5485)
                     /locus_tag="VGA78_15135"
     CDS             complement(4838..5485)
                     /locus_tag="VGA78_15135"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX9895261.1"
                     /translation="MARFRTVLFDLDGTLIDSIRLILDSYHHTLAAHGFPARPDDHWL
                     RGLGTPLRRQLGDWCDDPTQLEAMILTYREYNLEHHDGGVTPYPGVVETVRAVRARGA
                     RTGLVTSKNREGALRGLRVSGLDGTMDAVIGADDVTHAKPHPEPVQRALEMLGATAQS
                     AVFVGDSLHDMESGRAAGVATAAVLWGPFDRDHLRRSEPDYWLERPSDLLALVGD"
     gene            complement(5495..>6139)
                     /locus_tag="VGA78_15140"
     CDS             complement(5495..>6139)
                     /locus_tag="VGA78_15140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895262.1"
                     /translation="SRLGLGRSPEESWRWRTELARRWRGRALSRGSVVIECDFEAAVA
                     GVELAGEDRVLTSFAVARRGRLGWSSDHTLIDELLERALCSAGGRADSAVIAATVGSL
                     QRVIRAALLGATGSLWRIRPLAGWARPALTRLRLLAADAVRHRDTTRLAFADRAISFL
                     RRGHSAGERYLALRLARAPEGELLDLLGELPAPDPLPPPVRAHLTGLIVFRPVT"
BASE COUNT          986 a         2167 c         1964 g         1022 t
ORIGIN      
        1 gaccgggacc acgcggcgct gcgccgggcc cttcgtgccg cgctggcaac cgccggcagg
       61 ggtcgcttca cgatcggcgc ggcgcacgag gatgtgcact cggccgtcga ggactggctc
      121 acccgcgaag tgggagaagc cggggcccgg gtgcacaccg ggcgatcccg taacgaccag
      181 gtggcctgcg atctccggct gtatctcaag gatacgctgc tggagctgca tggggcggga
      241 actcggctcg ccgccgggtt ggtggatttc gccgctcgcc accgcaccgc attatggccc
      301 gggtatactc accagcgccg tgccatgccc tcgtccgccg ggctctgggc cgcggggctg
      361 gccgagacgc tcatcacggc gctcgaagcc gtcgggccgc tctgggcccg ggtggatcgt
      421 tcgcccctcg gtaccgcggc cggctacggc gtgcccctgc cccttcgccg cgaagccgcc
      481 atgcgggccc tcggcttcgc ttccctcgat caggccgtca ccaccacgca gctctcacgg
      541 ggccagctgg agacggcggt gctggcctgg tgcgtcgacc tggctcatgc cgccagccga
      601 tgcgccgcgg atgtcgtgct gctctcgtcg gaggaattcg gatttctggt gttgccgccc
      661 gagctcgcca ccggctccag cattatgccc cagaagcaga acccggacct gttcgagctc
      721 acccgggccc gcgctgccgc actggacgga gacctcgccg cggtgctgca gctcaagggc
      781 aagctcacca gcggctacca ccgcgacttt cagctcctga aggaaccgct gttccgcggg
      841 ctcgaccgca ccggcgagat gctcgtgatg atggcccacg ccgtgccccg gctggccgtg
      901 gatcgcgagc ggggaatggc ggcgctgcgg ggcgacgcgc tggtcaccga cgaagtcatg
      961 cggcgggtcg aagccggcca accgttccgg agcgcctatc gcgccgtggc cgccgaggtg
     1021 aaggaaggcg tgatcttcct ggtgccatcg gccgccgatc tggtccggcg ccgtcgctct
     1081 accggtggcc tggggaatct cggcttgccg ggtttccggg ggcgcgtggc cgcgctccgg
     1141 cggtgggaac gacgggagcg cacccggttc gaccgggcta tggctcatct ggcggggcga
     1201 acccgatgac cgccaaccgc aagcagcggc tgcttcggat tctcgaactc atcgccaccc
     1261 ggcggatccg gacccaggag gagctggcgg acgggttacg acgcgacggg tgggaggtca
     1321 ctcagtcgtc ggtgagccgc gacatcacgg cgctggggtt ggtgaaggtc gagggagcat
     1381 atgcccgccc cccggccaac gagctccggg gagtggatcc caacgagttg cgcatccgcg
     1441 atggggtatt gcagtacgag ccggccggcg atgcgctggt ggtggttcgc acgccgccgg
     1501 gcgaggccaa ccgggtcgcg gtggcgatcg atcgcctcgc ctggcccgaa gtggtaggta
     1561 ccctcgccgg cgacgatacc atcttcatcg ccgctcgaga cggcgccggc cagaaaggcg
     1621 ccatccaacg aatcagccgg ctggcgcgat aggacgaagg gagataggag agaggggaag
     1681 aggcagtaca gctatctcgc cgttgcggtg acgtgctgca gactccggat cagctcttcc
     1741 acgttccttc tccattaccg cttgcggtgc caggctcctc ctgaaagcac cgataccagt
     1801 caagaaaacc aatccgcaga tgccgcagat tacgccgatt caagagtctc gatcgtgttt
     1861 ccggcaacac cggccagcgg ccggttgttc ccagtttgct atctgcgaaa tccgtcgtct
     1921 gcggattact ttggtcgctg gttcaatacc gcagcctggg cccttcaggc ggattcaagg
     1981 ctcatcccag tcttaggcgg gctcctcaac ccgtgctcat gttccacccg gcgatcatcg
     2041 tgagaacgtt cccaatgccc gtgaagggcg gccccagact caagctcgat ggcatgctgc
     2101 cttccatccg agaggacgac gatcagcttc gtgagattgg ccttcgtgct tgcaatccga
     2161 agcgcggtcg aatcaagtgt cgcatcccga atatccgaga gtccgacggc agtccgcatg
     2221 ccctcctttg accagatcag gcttgcatga gtaaggaggg tccagctcgt ggctcgtttg
     2281 taagtgcggt tccgtctggt gcaactccgc taacgactcg taccaagtcg cctgagagtc
     2341 ggaatactct caatgcgcct agttatccat tcaagccctc cttgaccacg cgctcgcgcc
     2401 ggtcaaaagc ctcgatcatg ttgaggggac tgccggccaa cggcagtttg ttttttcttg
     2461 gtactatctg gcaaatccgc gtcatctgcg gattgctttg gttgctgttt tcaatgcctc
     2521 agccttgggc cgttcagaac cgaaggaggt gttccggccc ctcccggcgc accaggggcc
     2581 ggaaacgggg atcgaagaga aggagaagca ccgaagctcc aggcgcgaga cgctcttctc
     2641 tcctctctcc tctctcctct ctcctatctc ctatctcctc tctcctgttt tcccgtagcg
     2701 taccgcggtg acctccgcca gaatcgccag cgcaatctcc cccggatgcc tgccccccag
     2761 gtcgagtccg atgggcccgt gcagtcgcgc gatctcctcc tcggaatagg ccgcggctcg
     2821 cagccgcgcc cgccgagcct cctgggtctt gcgtgagccg atcgcgccca cgtagcgggc
     2881 cggcgatctg agcgcgaagt ccagcgccgg ctcatcgaac ttgggatcgt gcgacagcac
     2941 gcatacgcag gtcgcgtcgt cgatgccgac ctgtttgaac gcgtcttccg gccattcctg
     3001 caccagcagg tcggcgtcgg gaaaccgctc gggggtgagg aagccccccc ggccatccgc
     3061 taccaccacg cggtaaccca gcggcttggc cagccgggtc aattcctccg ccacgtgcac
     3121 ggccccgatc agaaacaagg tcggctgttt gggaaatact tccaggaata cggtggcttc
     3181 gcccgccggc gtcggtactg tcaccgtgcg ggagttcagc gcctcgaggg ctgccttcga
     3241 ggcatccgct acggcgcccg cgacggccgg gtccggacgg cctaacggcg cggcgccgcc
     3301 aatgacgctc ggcacgacca cgccgccggg cccggtcgcg gccgccagca gctcggggcg
     3361 cacctcaggt tcgacgaaaa cggcgatgct gccgccacag gcgaggccaa cttcccaggc
     3421 ccgctcgtgc gtcacggtaa actcgatcag tttcgattcg cggctccgaa tggcctcacc
     3481 gatcgccgtg accacggcac cttcgacgca accgcccgag accgagcccg ccatccggcc
     3541 atcggcggtc gcaatcaggt tgctgccttc gatccgggga gccgatcccc agacccgtgt
     3601 caccaccgct cggcccaccg gcccatcggc cgccagtcgc tccaggtcct gcagcacgtc
     3661 acgcattcct acaagatggt cggggcaatg tcgagaaggg agcctgctcc ctgctccctg
     3721 ctccctgctc cctgcttcct gcttcctgct ccctgcttcc tcctccctgc ttcctgctcc
     3781 ctgctccctg ctccctgctc ctttagtcag ggaaggaacc cggatcgctc ttcggccgtc
     3841 ggaagtcggc agacctcccg cttgccgaac cagccatacc gatgccgggc gatccagtcg
     3901 tatatcagat cccgcaatcg gcgcggcacg acccgcaaga gacctgtcgc gcgccacccg
     3961 ccgcccaggt ggtggaacac cccgagtact gcgctggatc ggtccagcat ccgcccctcg
     4021 gcttcgagca cgatcgtggt gggatcgatg cccttggtct tccccagccg ttccgccgcg
     4081 gtccggcctt gcaggggagc gaaccgcaac cggtggtgcc ggtcgtgccg gagcaggaaa
     4141 tccacgaatc gattgcagag cccgcagacg ccatcgaagt acacgatggg cggatcgttc
     4201 atctgctgtt ttcctccgcc tgcccctcca gcatctggag atcctgaggc gtatccacgt
     4261 cggggttgac tcccggcacg gtgatggtgc cgaggcggac gtttccccag gtggccagca
     4321 ctcggaatcc ctggtcaccg gtcaggctcc gagcccggtc ccacactctt cgatggacga
     4381 tcgtgggatg tccgggcgtg gcggaggggt cgcccgcgta ctggggccgt accagatcca
     4441 tcgaaggccg aaacgccttc accagcgctt ccacaacctc gccccgaagt aggggctggt
     4501 cacccagcac caccatcgcc ccttcgagcg gttgccaccg ttccgcgatc aacgccgtga
     4561 gtcccacccg gaggctcgat gccatcccat tggcgggccg gggattgagc tgcggctcca
     4621 gtccccattc tcgcgccagc cgcggcgtct cgagatcgtc cggccggtgg accacaaccg
     4681 cccctgtcag aatgccatcg tcccgcgcgg cggcaacccg gtccatcacg tgagcgacga
     4741 tagggcggcc ccgccagagc gcgagcagct tggcgctgcc gaaacggcga cacaacccgg
     4801 ctgccagaat gatggcggcg accggaggca gcggcactca gtctcccacc agggccagca
     4861 ggtcggacgg gcgctcgagc caatagtccg gctcggaacg gcgcaagtga tcacgatcga
     4921 acggtcccca cagcacggca gccgttgcca ccccggcggc ccgccccgat tccatgtcgt
     4981 gcaggctgtc accgacgaag actgccgact gcgcggtggc gccgagcatc tcaagcgcgc
     5041 gctggaccgg ctcggggtgc ggcttggcgt gggtgacgtc gtcggctccg atcacggcat
     5101 ccatggtgcc gtccagtccg gagacccgca aaccgcgcag ggcgccttcc cggttcttgc
     5161 tggtgaccag tccggtccgc gctcctctgg cgcgcaccgc tcggaccgtc tcgaccacgc
     5221 ccggataagg cgtcaccccg ccgtcgtgat gttccaggtt gtactcacgg taggtgagta
     5281 tcatcgcctc cagctgggtc ggatcgtcgc accagtcgcc gagctgtctc cggagtggag
     5341 tgcccaggcc gcggagccag tggtcgtcgg gacgagcggg gaagccgtgc gccgccagcg
     5401 tatggtggta gctgtcgagg atgaggcgga tcgaatcgat gagcgtgcca tccaggtcga
     5461 acaggacggt ccggaagcgg gccatgggtc aaagctaagt caccggccgg aacacgatca
     5521 gtccggtaag gtgggcccgg accggtggtg gcaacggatc gggggccggg agttccccga
     5581 gcagatcgag cagctctccc tccggcgccc gagccaggcg gagtgcaagg tagcgctctc
     5641 ccgcgctgtg accccgtcgc agaaacgaga tcgcccgatc ggcgaacgcc agcctggtcg
     5701 tgtcccggtg ccggacggcg tccgctgcga gcagccgcag ccgggtcagc gccggacggg
     5761 cccaccccgc cagcggacgg atccgccaca agctgccggt cgctcccaat aaggccgcgc
     5821 ggatcacgcg ctggagtgag ccgacagtcg cggcgatcac cgcggaatcg gccctgccgc
     5881 cggcggagca aagggcccgc tccagcagct cgtcgatcag agtgtgatcg ctgctccaac
     5941 ccagccgccc gcgacgggcc accgcaaaac tggtcagcac ccggtcttct cctgccagct
     6001 ccacccccgc caccgccgcc tcgaagtcgc actcgatcac caccgatccc cgactcaagg
     6061 ccctgccgcg ccagcgccgc gccagctcgg tccgccagcg ccaggattcc tcgggcgatc
     6121 ggcccagccc cagtcgtga
//
LOCUS       DASWKS010000528         5492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_653608, whole genome shotgun sequence.
ACCESSION   DASWKS010000528 DASWKS010000000
VERSION     DASWKS010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5492
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653608"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VGA78_15145"
     CDS             complement(<1..906)
                     /locus_tag="VGA78_15145"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX9895263.1"
                     /translation="MRCTEHLGGCLGESVLRGGRAGGRADRATAGEDLSFRAALFADA
                     GLVRSGDGGLLVAGVPVESIARSAGTPAFVYNAEAIRAKFGALELVLGALPHRVHYAV
                     KANGNLAVLRVLQQLGAGCDIVSAGELARALAAGFDPEMIVFSGVGKTRDELALACRT
                     GIGQINIESLEELAALESLAAPLERPVRTGIRINPSVTVDTHPFISTGTAAAKFGIPA
                     DLAVTTALRIAAHPGLRLTGLAMHLGSQLLDVAPYVEGARQLAGLVTEIRQAGVATLE
                     GLDLGGGLGIRYHHERPLEPLRLAEA"
     gene            complement(858..2309)
                     /gene="proS"
                     /locus_tag="VGA78_15150"
     CDS             complement(858..2309)
                     /gene="proS"
                     /locus_tag="VGA78_15150"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEX9895264.1"
                     /translation="MADKALTTRAQDFSAWYNELILRAELADYSPVRGCMVIRPNGYA
                     IWEEMQRALDGMFKDSGHSNAYFPLFIPQSFLAKEAEHVEGFAPETAVVTRGGGKELE
                     EPLVVRPTSETIIYAMLSKWIQSYRDLPVLLNQWCNVVRWEMRTRLFLRTTEFLWQEG
                     HTAHAAEAEAEAETLMILSTYRTFMEQYMAMPVLTGRKTDSERFAGAIRTYALEALMQ
                     DNRALQAGTSHNLGQNFAKAFDVTFQTAEGGLDHVWSTSWGVSTRLIGGLIMTHGDDA
                     GMVCPPRLAQWQVVIVPIYKTDEERAATFEAADRLAHQLKLAGLRARADLRDGLKPGA
                     KYYEWETRGAPLRLELGPRDLAADTVMLARRTGGKKESLPLGGIAQRLYAEVDAMQRD
                     LFERARTRREENSIRGATKADLLGKMAGSGGGGFVYGGYCGSPRCEAEIKEQTKATIR
                     VLPDPEFRSAETPERCLWCDAPSISEAVWARAY"
     gene            complement(2291..3583)
                     /gene="hisS"
                     /locus_tag="VGA78_15155"
     CDS             complement(2291..3583)
                     /gene="hisS"
                     /locus_tag="VGA78_15155"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR00442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEX9895265.1"
                     /translation="MQPQALPGFRDFYPEEFALRRHIFESWRRVAVRYGFEEYDGPPL
                     EPLELYTVKSGEEIVAQLYRFTDKGGREVALRPEMTPTLARMVAARANGLKKPIRWFS
                     IPQLFRHERQQRGRLREHFQLNCDLIGEPGPLADAEIIAVAIDAMRELGLTERDVRVR
                     VSDRRLLTVLLGEAGLEESQHPLAYQLLDKLGRGEFGGVRRALLESGTPESVIHRLEG
                     VKQIRQWADLEASFPLATSAGEPLRAVFQAMDRMGLVDWLDLDLTIVRGLAYYTGTVF
                     ELFDSGYSLRAICGGGRYDSLLKTLGEVDLPALGFGMGDVVLAELLKERKLVPSFEQR
                     LDVFLAAVTGEDLPYLLTLAHQLRDRGLRVEYPLAASALGKQLKLADARKARFAIVVG
                     PDDRARSEVMVKELETGRQEAVRQNRLAETLAEWQTKR"
     gene            complement(3649..4881)
                     /locus_tag="VGA78_15160"
     CDS             complement(3649..4881)
                     /locus_tag="VGA78_15160"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX9895266.1"
                     /translation="MALSYAEALAFLYPRTQNYKFGLERTERLLDELGRPDRLFPIVH
                     VGGTNGKGSVSTLIAETLRAAGWRTGLYTSPHLVSFRERYLVDRIPIGGSAVAMWVEQ
                     LRPLIERIDATFFEVGTALAFADFAARGAEIAVIEVGLGGRLDSTNVVRPIASVVTKI
                     ELDHQKYLGETLEEIATEKAGIAKPGAPFIVGETRPELIAVLRREGERAVRRLDPAAS
                     VDLRVVPPGARYEGELLLAGAHQRRNAAVAQAALEALPSRWRPTPAAIEAAFAAAFIP
                     GRLDRRGRWLFDVAHNLDGVRALVKSLGEMNLARPITALVSILGDKAWADMLVELDNG
                     IDRGILTIAPSADTRRWDIEWLRRWLKEPHRPPARAQWHLTPDFGEALAEAQRGSGTI
                     VVTGSFHTVGDVMRTLGL"
     gene            complement(5012..>5492)
                     /locus_tag="VGA78_15165"
     CDS             complement(5012..>5492)
                     /locus_tag="VGA78_15165"
                     /EC_number="2.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEX9895267.1"
                     /translation="SVVGEKIARLAQRSVDKRAPLLLVCTSGGARMQEGVFSLMQMAK
                     TSAFIAQLRPAAIPFLTLLTDPTTGGVSASFAMQGDVVMAEPGAVIGFAGQRVIKQTI
                     GQDLPEGFQTAEFLMEKGQVDLVVARASLRDTTTRLLRHMLGQKAGQPVEAAAAASG"
BASE COUNT          924 a         1939 c         1729 g          900 t
ORIGIN      
        1 cgcctccgcc agccggagcg gctccagcgg tcgctcgtga tgatagcgaa tgcccaggcc
       61 accaccgaga tccaaccctt ccagggtcgc caccccagcc tgacgaatct ccgtcaccaa
      121 tcccgcgagt tgccgcgccc cttccacgta cggagcgaca tccagcagct ggctgcccag
      181 atgcatcgcc aacccggtga ggcggagacc ggggtgggcg gcgatgcgca gcgcggttgt
      241 gacggccaga tcggccggga ttccaaactt ggcggccgcg gtcccggtgg agatgaaggg
      301 atgggtgtcg accgtcacgc tggggttgat ccggatgccg gtgcggaccg ggcgctctaa
      361 cggggcggcc agggactcca gcgccgccag ctcctccaga gactcgatgt tgatctgtcc
      421 aataccggtc cggcaggcca gcgccagctc gtcccgggtc ttgccgacgc cactgaagac
      481 gatcatctcg ggatcaaacc ccgcggccag ggcccgggcc agctcgccgg cggagacgat
      541 gtcgcagccg gccccgagct gctggaggac tcgcagcacc gccaggttgc cgttggcttt
      601 gaccgcataa tgaacccggt ggggcaacgc tcccagcacc agttcgaggg ccccgaactt
      661 ggcccggatg gcttcggcgt tgtacacgaa agccggtgtc ccggcggagc gggcaatact
      721 ctccaccgga accccggcca ccaacagccc gccatcgccg gaccggacca gcccggcgtc
      781 ggcgaacagc gcggcccgga aactcagatc ctcgccggcc gtggcacgat ccgcccgtcc
      841 gccggcccgc ccacccctca gtacgctctc gcccagacag cctccgagat gctcggtgca
      901 tcgcaccaga gacaccgttc cggcgtctcg gccgaccgga attccggatc gggcaacacc
      961 cggatggtgg ctttggtctg ttccttgatt tctgcttcac acctggggct gccgcagtag
     1021 ccgccgtaca cgaaaccgcc gcccccgctg ccggccatct ttcccagcag gtcggccttg
     1081 gtcgcccccc ggatgctgtt ttcctcccgc cgggtccggg cccgttcgaa cagatcgcgc
     1141 tgcatggcgt cgacctcggc gtagagccgc tgggcgatcc cgcccagcgg cagcgactcc
     1201 ttcttgcccc cggtccggcg cgccagcatg acggtgtcgg ccgccaggtc gcggggaccc
     1261 agctccagcc ggaggggagc gccgcgggtc tcccactcgt agtacttggc acccggcttg
     1321 aggccatcgc gcaggtcggc ccgggcccgc agccctgcca gcttgagctg gtgcgccagg
     1381 cggtcggccg cctcgaacgt cgcggcccgc tcttcgtcgg tcttgtagat cgggacgatc
     1441 accacttgcc actgagccag tcgcggcgga cagaccatgc cggcatcgtc gccgtgggtc
     1501 atgatgagcc cgccgatcag ccgagtggaa acaccccacg aggtgctcca gacatgatcc
     1561 agtccgccct ccgcggtctg gaacgtgacg tcgaatgcct tggcgaagtt ctgacccagg
     1621 ttgtggctgg tgcccgcctg cagcgcccgg ttgtcctgca tcagcgcttc cagcgcgtag
     1681 gtgcgaatcg cgccggcgaa ccgctcgcta tcggtcttac gcccggtgag aaccggcatg
     1741 gccatatact gctccatgaa ggtccgatag gtcgacagaa tcatcagggt ctcggcttcc
     1801 gcctccgcct cggcggcgtg ggcggtatgt ccctcctgcc acaggaactc ggtggtacgc
     1861 agaaacagcc gggtccgcat ctcccagcgc accacgttgc accactggtt cagcagcacc
     1921 ggcaagtcgc ggtagctctg gatccacttg gagagcatgg cgtagatgat ggtctccgac
     1981 gtcggcctca ccaccagcgg ctcctccagc tccttgcctc ccccccgggt caccaccgcc
     2041 gtttcgggag cgaagccctc gacgtgctcg gcctccttgg ccagaaagct ctgggggatg
     2101 aagagcggga aatacgcgtt ggaatgcccc gaatccttga acatgccgtc caacgcccgc
     2161 tgcatctctt cccagatggc gtagccgttg ggccggatga ccatgcagcc ccgcaccggg
     2221 ctgtagtcgg ccagctcggc gcgcaggatc agctcgttgt accaggcact gaagtcctgg
     2281 gcccgcgtgg tcagcgcttt gtctgccatt ccgccagagt ctccgccaat cggttctgcc
     2341 ggacggcctc ctgcctcccg gtctccaact cctttaccat tacctcgctt cgagcccggt
     2401 catccggccc gaccacgatc gcgaaacggg cttttctggc atcggccagt ttgagctgct
     2461 tgcccagggc cgacgcggcc agggggtatt cgacccggag cccgcggtcc cgcagttggt
     2521 gggccaaggt gagcagatag gggaggtcct caccggtgac ggccgcgagg aagacatcca
     2581 gccgctgctc gaacgacggc accagcttcc gctccttgag cagttccgcc agcaccacgt
     2641 cgcccatgcc gaatcccagc gcggggagat cgacctcgcc cagcgtcttg aggagggaat
     2701 cgtagcgccc gcccccgcag atggcccgca ggctgtaccc cgaatcgaac aactcgaaca
     2761 cggtgccggt gtagtacgcc aatccgcgta cgatggtgag atcgaggtcg agccaatcca
     2821 ccagacccat ccggtccatc gcctgaaaca ccgctcgcag cggttccccg gcgctggtgg
     2881 cgagcgggaa gctcgcctcg agatcggccc attgccggat ctgcttgacg ccctcgagcc
     2941 ggtggatgac ggactccggt gtgcccgatt cgagcagcgc ccggcgcact ccaccgaatt
     3001 caccccggcc cagcttgtcg agcagctgat acgccagcgg gtgctgcgat tcctccaggc
     3061 cggcctcacc cagcagcacg gtcagcaggc gccggtcgga gacccgcacc cgcacatccc
     3121 gctcggtgag acccagctcg cgcatcgcgt cgatcgccac agcgatgatc tcggcgtcag
     3181 ccagcggccc gggctccccg atcaagtcac agttgagctg gaaatgctcg cgcagcctgc
     3241 ctcgctgttg ccgctcatga cggaacagtt gcggaatgga gaaccagcgg atcggcttct
     3301 tgagaccgtt ggcgcgggcc gccaccatcc gggccagcgt gggcgtcatc tccggccgca
     3361 gggccacctc ccgaccgccc ttgtccgtga agcggtagag ctgggccacg atctcttccc
     3421 cgctcttgac ggtgtagagc tccagcggtt cgagcggggg accgtcgtac tcttcaaacc
     3481 cataccggac cgcgacgcgg cgccaagact cgaagatgtg gcggcgcagc gcaaattctt
     3541 caggataaaa gtcgcgaaac ccaggcaggg cttggggttg catcggggga atctaatatc
     3601 agtacggagt actgggtact gaggactccc cccactcagt actgactgtt agagtcccag
     3661 ggttcgcatc acgtccccca ccgtatgaaa actccccgtg accacgatgg tcccggatcc
     3721 acgctgtgcc tccgccagcg cctccccgaa gtccggcgtg agatgccact gggctcgggc
     3781 ggggggccgg tggggctcct tgagccaacg gcgcaaccat tcgatatccc accgcctggt
     3841 atcggccgag ggagcgatgg tgaggatccc gcgatcgatc ccgttgtcga gctccaccag
     3901 catgtcggcc caggccttgt cgcctagaat ggaaaccagc gccgtaatcg gccgtgccag
     3961 gttcatttct cccagcgatt tcaccagggc gcggactcca tcgagattgt gggccacgtc
     4021 gaacagccat cggccccgtc gatccagccg tcccggaatg aacgcagcgg cgaacgccgc
     4081 ctcgatggca gcgggcgtcg gtctccagcg tgagggtaag gcctccaggg cggcctgggc
     4141 caccgcggca ttccggcgtt gatgggcgcc ggccagcagc aactcgccct cgtacctggc
     4201 tcccggcggc accacccgta agtcgaccga ggccgccggg tcgagccggc gaacggcgcg
     4261 ctcgccttcc cgtctcaaca ccgcgatcag ctccggccgg gtttccccca cgatgaacgg
     4321 ggcacccggc ttggcgatgc cggctttctc ggtggcgatc tcctccaggg tctcgcccag
     4381 gtatttctgg tggtcgagct cgatcttggt cacgacgctc gcgatcggcc gaaccacatt
     4441 ggtgctgtcc agtcgcccgc cgaggcccac ctcgatcacc gcgatctcgg ctccccgcgc
     4501 ggcgaaatcg gcgaacgcca gggccgtgcc cacctcgaag aacgtcgcat cgatccgctc
     4561 gatcagcggc cgcagctgct ccacccacat cgcgacggcc gatccgccga tcggaatgcg
     4621 gtccaccagg tagcgctccc gaaacgaaac cagatgggga gaggtgtaga ggccggtgcg
     4681 ccagcccgcc gcccgcaagg tctcggcgat gagggtcgag acactcccct tcccgttggt
     4741 cccgccgaca tgcacgatgg gaaagagccg atcagggcgg cccagctcat cgagcaatcg
     4801 ctcggtacgc tccaggccga acttgtagtt ctgggttctc gggtagagga aggcgagggc
     4861 ttcggcgtag gacagagcca tttagcgatt cagcgatttg acggtttcgc gattgcgtac
     4921 ccggtgctcg tcacttgagg tagcaaccag gagcccgcaa tcgtaatcgt caaaccgcta
     4981 aatcgcttac gcgctgaatc gcaacggtcg gtcagccgct tgccgccgcc gcggcctcca
     5041 ccggctggcc cgccttctgg cccagcatgt ggcgcagcag acgggtggtg gtgtcgcgca
     5101 gcgatgcgcg cgcgacgacc agatcgactt gacccttttc catgaggaat tcggcggtct
     5161 gaaatccctc cggcaagtcc tggccgatcg tctgtttgat gacccgctgc ccggcgaagc
     5221 cgatcaccgc gcccggctcg gccatgacca catcgccctg catggcgaac gaggcggaca
     5281 cgccaccggt ggtggggtcg gtcagcaggg taaggaacgg aatcgccgcc ggccggagct
     5341 gggcgatgaa agccgaggtc ttggccatct gcatcaggga gaaaacgccc tcctgcatcc
     5401 gggccccgcc cgaggtgcaa accaggagca ggggggctcg cttgtccacg gatcgctgag
     5461 ccagccgggc gatcttctcg cccaccaccg ag
//
LOCUS       DASWKS010000529         2124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1390925, whole genome shotgun sequence.
ACCESSION   DASWKS010000529 DASWKS010000000
VERSION     DASWKS010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1390925"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1361)
                     /locus_tag="VGA78_15170"
     CDS             complement(<1..1361)
                     /locus_tag="VGA78_15170"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895268.1"
                     /translation="MSTDRRLLATLRPWSGLFALGLATAVLASVFDGLTIVVLIPFLK
                     QLFGTAGVLERAPTALEQWTEGLLQPVLLGKTAAAAAATLMVILIGALLVKNLMVYLT
                     AQTSIRIQEGVVRDLRRRLFDHLLVVDLGFFQQTRVGQLLAALIADADQVKVAVTAAL
                     ASLIQNAAVVLVTLVIMWGISSRLTVLSLATMPLLLIGVQLLVRRLRRHARNRAEERG
                     QMTSIAAERLGAMKLIRASSTEASESRDFSVLVDRYRKRVIRTQRYATLTSPVTEIFA
                     GLVLILVIWAATVPAIVGQPLGPEATIVFLLGALKTMSPLKALTQFPTHWATAAASAD
                     RVFRLLDLPAVESDPPDAAPARFTRDIAFDRVSFRYQSDADMVLDDVTFTVPRGQVVA
                     LVGPSGAGKTTLVELLPRFWEPTSGEIRLDGVPLTRLSRQSARALMAVVGQDTVLLND
                     TVEA"
     gene            1427..>2124
                     /locus_tag="VGA78_15175"
     CDS             1427..>2124
                     /locus_tag="VGA78_15175"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX9895269.1"
                     /translation="MPTPIEILALRFSSMGDLILTTPLFRAIKARHPGARVTLVTRHE
                     YVPLFAHSPRIARVIGWDQRTPLRELARELRETRWTHRLDLHGSLRSMILRRLVGGPW
                     TGYPKRRLERAVLIRTKRDIYRDRRPVAERYFDAAQELDVTSDGGPPEVFVSMESSAR
                     ADEFLRENRLGNERTLVALVPGAAHATKEWPEHHWITLVARLAEQRVDLVILGGTKEA
                     GLGARLAAIAGPHAA"
BASE COUNT          375 a          709 c          725 g          315 t
ORIGIN      
        1 gcctccaccg tgtcgttgag cagtaccgtg tcctgcccca ccaccgccat cagggcccga
       61 gccgactgac gggaaagtcg ggtgaggggc acgccgtcga gccggatttc cccggaggtc
      121 ggttcccaga accgcggcag caattccacc agggtggtct tgccggctcc ggagggtccc
      181 accagcgcga ccacctggcc ccgcggcacc gtgaaggtca cgtcatccag caccatatcg
      241 gcgtcagact ggtagcggaa cgacacccgg tcgaaggcga tgtcgcgggt gaagcgcgcc
      301 ggggcggcgt ccggcggatc cgattccacg gccggcaggt ccagcaggcg gaacacccgg
      361 tcggcgctgg cggcggcggt ggcccagtgg gtagggaact gggtcagggc cttgagcggg
      421 gacatggttt tgagggcgcc cagcagaaac acgatggtgg cctcgggtcc gagcggctga
      481 cccacgatgg cgggaaccgt cgcggcccag atcaccagaa tcaggaccag accggcgaag
      541 atctcggtca ccgggctggt gagggtggcg taccgctggg tccggatcac ccgtttgcga
      601 tagcggtcga ccaggaccga gaagtcccgg gattcgctgg cttcggtgct ggaggcccgg
      661 atcagcttca tggcgccgag acgctcggcg gcgatgctgg tcatctggcc ccgttcctcg
      721 gcgcgattgc gggcgtggcg ccgcagccgc cgcaccagca gctgcacgcc gatcagcagc
      781 agcggcatgg tggccaggct caataccgtc aggcggctcg agatccccca catgatcacc
      841 agggtcacca gcaccaccgc cgcgttctga atcagggaag ccagcgccgc cgtcaccgcc
      901 accttgacct gatcggcatc ggcgatcagc gcggcgagca gttgacccac ccgggtctgc
      961 tgaaagaaac ccagatcgac caccagcaga tgatcgaaca accggcgcct gagatcccgc
     1021 accacgcctt cctggatccg gatactggtc tgggcggtca ggtagaccat cagattcttc
     1081 accagcaggg ccccgatcag gatgaccatg agcgtggccg ctgccgccgc cgcggtcttg
     1141 cccagcagca cgggctgcag caatccctcg gtccattgtt ccagagcggt cggggcccgt
     1201 tcgagcaccc cggcggtgcc gaacaactgc ttcaggaagg gaatcaggac gacgatggtc
     1261 aggccgtcga agaccgaggc cagcaccgcg gtcgccagac ccagcgcaaa gaggccggac
     1321 cagggccgga gagtcgccag caggcgacga tcggtggaca cgaggacaaa gctaatgcag
     1381 agtgcagaat gcagactgca ttcatgttca ccccttagat ttcatcgtgc ccacccccat
     1441 tgaaattctc gcccttcgct tttcctccat gggcgatctc attctcacca ccccgctgtt
     1501 tcgcgccatc aaggcccgtc atcccggggc ccgggtgacc ctggtgacgc ggcacgagta
     1561 tgtgccgctg ttcgcgcaca gtccgcggat cgcgcgggtg atcggctggg accagcggac
     1621 acccctgcgc gaactggcgc gggagcttcg ggaaacccgc tggacccacc ggctggacct
     1681 gcacgggagc ctccgctcga tgatcctgcg ccgcctggtg ggcggaccct ggaccggcta
     1741 tcccaagcgt cggctggagc gagcggttct gattcgaacc aagcgggaca tttaccgcga
     1801 ccggcggccg gtggccgagc ggtacttcga tgcggcgcag gagctcgacg tcacgtccga
     1861 cggcggcccg ccggaggtct tcgtgtcgat ggagtccagc gcgcgggcgg acgagtttct
     1921 ccgggagaac cggctgggaa acgagcggac gctggtagcc ctggttccgg gcgcggctca
     1981 cgccaccaag gaatggccgg agcaccactg gatcaccctg gtcgcccggt tggcggagca
     2041 gcgggtcgac ctggtgatcc tgggtgggac caaagaggcc gggttgggtg cacggctcgc
     2101 cgccatcgcc gggccacacg cagc
//
LOCUS       DASWKS010000530         5602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_284530, whole genome shotgun sequence.
ACCESSION   DASWKS010000530 DASWKS010000000
VERSION     DASWKS010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5602
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284530"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..893
                     /locus_tag="VGA78_15180"
     CDS             <1..893
                     /locus_tag="VGA78_15180"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9895270.1"
                     /translation="LERGHRVARGEGMVTGAKGPPFPIGLSTTTFEQTFDGLPAVTAL
                     FTDLSELKQLQELHLRAERLEAVAALSASLAHEIRNPLASIRSSVEQLALSAQSDDDE
                     RTLGRLIVKESDRLNRLLGEFLDFTRVRAVNFSIVNLHAVALETARLIRKRPECGDQL
                     SLEVEGEATLIEADEDLVHRVVSNLVLNAVQACKGTGRVVVTVGRADTQGLPPGGGME
                     EPVRLVVADNGPGIEPDLLERLFQPFVSRRPGGSGLGLAIVQRAVDAHRGLVLVDSQP
                     GQGATFTVYLPSRPYREDAA"
     gene            890..2272
                     /locus_tag="VGA78_15185"
     CDS             890..2272
                     /locus_tag="VGA78_15185"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9895271.1"
                     /translation="MNQQPSVLVVDDESSILDTLRILLRKEGYEVTTAQGGKAGMEQI
                     RSGNHSIVLTDVRMPQVSGLDILRTAREQDPETPVILMTAQASLQTAVQAVNEGAFYY
                     IQKPFSNDELLAILRRACEFRSIRVENKQLKQDIRRRSDRPHVNRPIGKSRRFTDVLK
                     LAEVVAPASSTVLIQGESGTGKEVVARYIHNLSPRAEGPFLSINCGALPETLLESELF
                     GHVKGSFTGAVRDKQGLFAAARSGTFFLDEVGEMPPSLQIKLLRVLQEREVIPVGATE
                     AIPVDVRIIAATNRDLEEEVRRGNFRPDLFYRLNVIALELPPLRDRKDDLLLLLDAFL
                     QDLATERGLEIKALSSEAMDAVMVYDWPGNVRELQNALEHAVVLTRGSNIEPGALPER
                     ITRRKKEPLVADRVQANPALDVIERAYIMWVLQAEGGNKTRAAEVLGIDPSTLYRKLS
                     RYEETVVKEV"
     gene            2387..5431
                     /locus_tag="VGA78_15190"
     CDS             2387..5431
                     /locus_tag="VGA78_15190"
                     /inference="COORDINATES: protein motif:HMM:NF013713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895272.1"
                     /translation="MIPLLYLLFVLSGAAGLFYESVWSRYLSLFVGHGAYAQVIVLVI
                     FLGGMALGAGLVSRRSARLRDPLYGYAMIELAVGLVGLVFHDLIYLPATNWAYDALFP
                     ALGGGSAIAFAKWTMAGLLILPQSILLGATFPLMSAGVIRRAPDRPGAALSFLYFANS
                     LGAAAGVLIAGFYLVQLAGLPGTLIAASILNLLVGLTALFIAKLRPPSEPALAPSGHA
                     TGSDSTSDASLLPLPVLSRLLLLAACVTALASFIYEVVWIRLLSLVLGSATHSFELML
                     SAFILGLSLGAFWIRRRLETIRRPLATLAAIQVMMGALAVLSLVFYRESFAWMVGLMA
                     AVGRTDQGYVLFNLARYGLCVAIMLPATFCAGMTLPLITRTLYVSGAGEASIGAVYSW
                     NTLGSILGAAAATLLLIPWLGLKGGLVLGGVLDMMVGFAVLVVLLQRRAPLMQATALS
                     GGIAAVSLLAALVVRLDRAFITSGVFRTGKAATYQLMYYRDGRTATVTVSKPTQGRIG
                     ISTNGKPDGSLDPVWFNACRASDTLKTMGGDDPTQLLLPLVTLAHRPGARSIAVIGQG
                     TGMSSHSLLASPEIESLVTLEIEPAMVEGSRAFYPANRRVFDDPRSTRVYADAKAYFA
                     GAGRRFDLIMAEPSNPWVSGVSGLFTSEFYQRVKRYLAPGGVLGQWLHTYEISDDLVL
                     TVLGAIHQNFSDYRVFAVNGSDLLIVAVAQGLVPDPEWKIFELPEVRRDVCHFHPIER
                     SHLDALLLTSKVALAPLLDDTREVNSDFYPVLDLGAERARFLKRSAGAINGLFHGIYD
                     FAGPAGNRRLVPDTVSVSGLGTVPRIAALLGSNQLRLNRRRVDPADSSWTEESIHGDA
                     HEGIRRWLEGVRAGRLSSSWAVWTREFSAAFSAWHGGTRGWVDPSFIDPIRAWLDRQN
                     APSAVRAAVDFRERLARREFARAAEPAQLLLAEAADGRLWIEPDLLREGAVISFLAAG
                     RQDLAQGAIDSLSRLAQRGPKDVRTRLLAAYAGQPQVGARAP"
BASE COUNT          836 a         1884 c         1906 g          976 t
ORIGIN      
        1 gcctcgagcg ggggcaccgg gtggcccggg gcgaaggcat ggtcaccggc gcgaaggggc
       61 cgccgttccc gatcggcctt tccaccacca cgttcgagca aaccttcgac gggctgccgg
      121 cggtgacggc gctgttcacc gacctctcgg agctcaagca gctccaggag ctgcacctgc
      181 gcgccgagcg gctggaagcg gttgccgcgc tgagcgcgtc gctggcccac gagatccgca
      241 acccgctcgc ctccatccgg agctcggtgg aacaactcgc gctgtcggcc cagtccgacg
      301 acgacgagcg gacgctgggc cggctgatcg tcaaggaaag cgaccggttg aaccggctgc
      361 tgggtgaatt cctcgatttc acccgggtgc gtgcggtcaa cttctctatc gtcaacctgc
      421 acgccgtcgc gctggagacg gcgcggctga ttcgcaagcg gcctgaatgc ggcgaccagc
      481 tttcgctgga ggtcgaaggc gaagccacct tgatcgaggc ggacgaggat ctggtgcacc
      541 gggtggtgag caacctggtg ctcaacgcgg tccaggcctg caaggggacg gggcgggtcg
      601 tcgtcaccgt gggccgggcc gacacccagg gtctcccgcc cggtggcggg atggaggagc
      661 cggtccgtct ggtcgtcgcc gataatggtc ccgggatcga gcccgatctg ctggagcggc
      721 tgttccagcc gttcgtgtcg cgccggcccg gcggcagcgg tctggggctg gcgatcgtcc
      781 agcgggcggt cgatgcccac cgcggcctgg tgctggtcga ctcccagccg ggtcagggcg
      841 cgaccttcac cgtatatctt cccagtcgtc cgtatagaga ggacgccgca tgaatcagca
      901 gccgtcggtg ctcgtggtcg acgacgagtc gagcattctc gataccctcc gcatcctgct
      961 tcggaaggaa gggtacgagg tcaccaccgc gcagggcggc aaggccggga tggaacagat
     1021 ccgctccggc aatcacagca tcgtgctcac cgacgtccgc atgccgcagg tgagcggcct
     1081 cgatattctg cggaccgcgc gggagcagga tcccgagacg ccggtgattc tcatgacggc
     1141 gcaggcgtcg ctccagacgg cggtgcaggc ggtgaacgaa ggcgcgttct actacatcca
     1201 gaagccgttc tccaacgacg agctgctggc gatcctgcgg cgcgcctgcg agttccgctc
     1261 catccgggtc gagaacaagc agctcaagca ggacatccgg cgccggagcg atcggcccca
     1321 cgtcaaccgg ccgatcggga agtcgcgccg ctttaccgac gtgctgaagc tggccgaggt
     1381 ggtggcaccg gcctcctcca cggtgctgat ccagggcgag agcggcaccg ggaaggaagt
     1441 ggtggcccgc tacatccata acctttcgcc ccgggccgag ggtccgttcc tctcgatcaa
     1501 ctgcggtgcc ctgcccgaga cgctgctgga gagcgagctc ttcggtcatg tgaagggctc
     1561 cttcaccggc gcggtccggg acaagcaggg cctgttcgcg gcggcgcgga gcggcacctt
     1621 cttcctggac gaagtgggcg aaatgccccc gtcgctgcag atcaagctcc tccgggtgct
     1681 gcaggaacgg gaggtcattc cggtgggcgc caccgaggcg atcccggtcg acgtgcgcat
     1741 catcgccgcc accaaccggg atctggagga agaagtgcgg cggggcaact tccgccccga
     1801 cctgttctat cgcctcaatg tcatcgccct ggaattgccg cccctgcgcg accgcaagga
     1861 cgatctgctg ctgctgctcg atgcctttct ccaggacctg gctaccgagc gcgggttgga
     1921 aatcaaagcg ctctcctccg aggccatgga cgccgtgatg gtctacgact ggcccggcaa
     1981 cgtgcgcgag ctgcagaacg cgctggagca cgccgtggtg ctgacccggg gcagcaacat
     2041 cgagccgggc gcgctgccgg agcgaatcac ccgccgcaag aaggagccgc tggtggcgga
     2101 tcgggtccag gccaatcccg cgctcgacgt catcgaacgg gcctacatca tgtgggtctt
     2161 gcaggccgag ggcggcaaca agacccgcgc ggccgaagtg ctgggcatcg atccctccac
     2221 cctgtatcgc aagctgagcc ggtacgagga gacggtggtg aaagaggtct gaccgcccgg
     2281 cgcagaattt gccccccaga gactctcccc gggtccaagc gggcggcggg gagtgcgttt
     2341 ctcgcgaatc acaactgatg gctgacacct gacagccgag gaccgtgtga tccccctcct
     2401 ctacctgctc ttcgtgctct ccggcgcggc cggcctgttt tacgagtccg tgtggagccg
     2461 gtacctgagc ctctttgtgg gtcacggcgc gtatgcccag gtcatcgtgc tggtgatctt
     2521 cctgggggga atggcgctgg gcgcggggct ggtcagccgc cgcagcgcga gactgcgcga
     2581 tcccctctac ggctacgcca tgatcgagct ggccgtgggc ctggtagggc tggtctttca
     2641 cgacctgatc tatctcccgg ccaccaactg ggcctatgac gcgttgttcc cggccctggg
     2701 aggcggttcc gcgatcgcgt tcgccaagtg gaccatggcg gggctgctga ttctgccgca
     2761 atcgatactg ctgggcgcca ccttccccct catgagcgcg ggggtcatcc ggcgcgcgcc
     2821 cgatcgcccc ggcgccgcgc tttcgttcct ctatttcgcg aatagcctgg gggccgcggc
     2881 cggcgtgctg atcgcgggct tctacctggt acagctcgca gggctgcccg gcacgctgat
     2941 cgccgcgtca atcctgaacc tgctggtggg cctgacggct ctgttcatcg ccaagctccg
     3001 cccgccttcc gagccggctc tggccccgtc ggggcacgcc accggctcgg attccacctc
     3061 cgacgcgagc ctcctgccgc tccccgtcct gagccggctg ttgctgctgg cggcgtgtgt
     3121 gacggcgctg gcttccttca tctatgaagt ggtgtggatc cggctgcttt cgctggtgct
     3181 gggcagtgcc acccactcgt tcgagctgat gctctcggcg ttcattctgg gcctgtcgtt
     3241 gggagccttc tggatccggc ggcggctgga aaccatccgc cggccgctcg cgaccctggc
     3301 ggcgattcag gtgatgatgg gggccctggc ggtgctgagt ctcgtgtttt atcgcgagtc
     3361 cttcgcctgg atggtgggtc tgatggccgc ggtcggccgc accgatcagg ggtacgtgct
     3421 gttcaacctg gcgcgctacg gcctgtgtgt cgcgatcatg ctgccggcca cgttctgcgc
     3481 cgggatgacg ctgccgctca tcacccgcac cctctacgtc tccggggcgg gcgaggcctc
     3541 gatcggggcc gtctacagct ggaacactct gggctccatc ctgggcgcgg cggcggcgac
     3601 tctgctgctg attccctggc tcgggttgaa aggcgggctg gtgctgggcg gtgtgctcga
     3661 catgatggtc ggcttcgccg tgctcgtagt actgctccag cgccgcgccc ccctgatgca
     3721 ggcgaccgcg ctgagcggag gaatcgcggc cgtgagtctc ctggcggcgc tggtcgtccg
     3781 gctcgaccgc gccttcatca ccagcggtgt ctttcggacc ggaaaggccg ccacctacca
     3841 gctgatgtac taccgggacg gccgcaccgc gacggtaacc gtgtcgaagc cgacccaggg
     3901 acggatcggg atttccacca acggcaagcc cgacggctcg ctcgacccgg tctggttcaa
     3961 cgcctgccgc gcgtcggaca cgctcaagac catgggtggc gacgacccca cccagttact
     4021 gctccccctg gtaaccctgg cccaccggcc gggtgcgcgt tcgatcgcgg tcatcgggca
     4081 ggggaccggc atgtcatccc actcgctgct ggccagcccc gagatcgagt ccctggtgac
     4141 gctcgagatc gaaccggcga tggtcgaggg atcgcgcgcg ttctaccctg ccaaccggcg
     4201 cgtgttcgac gacccccgct ccacccgggt gtatgccgac gcgaaggcat acttcgccgg
     4261 ggccggccgt cgcttcgacc tcatcatggc ggagccgtcg aatccctggg tgagcggagt
     4321 gagcgggctg ttcaccagcg agttctacca gcgggtcaag cggtacctcg cgcccggcgg
     4381 cgtgctgggt caatggctgc atacctacga gatcagcgat gacctggtac tcacggtcct
     4441 gggcgcgatc caccagaact tctccgatta ccgggtgttc gcggtgaacg gctcggacct
     4501 gctgatcgtg gcggtggccc aaggtctggt ccccgacccg gagtggaaga tcttcgagct
     4561 gccggaagtg cggcgggacg tctgccactt ccaccccatt gagcgcagcc acctcgacgc
     4621 cctgctgctc accagcaaag tggccctggc gccgctgctg gatgacaccc gcgaggttaa
     4681 ctccgacttc taccccgtgc tcgatctggg cgcggaacgg gcccggttcc tgaagcgctc
     4741 cgccggcgcc atcaacgggc tgttccacgg catatacgac ttcgcgggcc cggccggcaa
     4801 ccggcggctg gttcccgaca ccgtctcggt ttccgggctc gggaccgtcc cccgcatcgc
     4861 ggccctgctc ggctccaacc agctgcgcct gaaccgtcgc cgggtggatc ccgccgacag
     4921 ctcctggacc gaggaatcca ttcatggcga tgcccatgag ggcatccggc gctggctcga
     4981 aggggtcaga gccggccggc tttcctcgag ctgggccgtc tggacccgag agttctccgc
     5041 cgcgttcagc gcctggcacg gggggacccg cggctgggtg gacccgtcct tcatcgatcc
     5101 gatcagggcc tggctcgacc ggcagaatgc tccctcggcg gtcagggcag cggtggattt
     5161 ccgggagcga ctggcgcggc gggaattcgc ccgggccgcc gagccggccc aactgctcct
     5221 cgccgaagcg gcggacgggc gactctggat cgagccggat ttgttgcggg aaggggcggt
     5281 gatttcattt ctggcagcgg ggaggcagga cctggcacag ggggccatcg acagcctcag
     5341 tcgcctggcc cagcggggac ccaaggacgt gaggactcgg ctgctcgcgg cctacgccgg
     5401 ccagccgcag gtgggggctc gggccccctg agcgggccga aaccttgcaa aacccagcac
     5461 tcgaccccgt attgaaaacc ggcagtgcta ggccgcgttt ttcagtaacc ggcttgaaga
     5521 caatgggtta ctggtaatct cagtggcgtg gtacgctggt tgcccagggg ttcctcgggc
     5581 gatcacgcgc tcagcaatca cg
//
LOCUS       DASWKS010000531        12576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1035671, whole genome shotgun sequence.
ACCESSION   DASWKS010000531 DASWKS010000000
VERSION     DASWKS010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12576
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035671"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..475
                     /locus_tag="VGA78_15195"
     CDS             59..475
                     /locus_tag="VGA78_15195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HEX9895273.1"
                     /translation="MSVTKSLRVPQELDREIRRELKRSGIKEWSAGVIQLITEALQMR
                     RAPGIVFVDSPSGRRAVIGGTGIDVWEIVAAWQSVAKDFERLRAVYDWLPESQLRAAL
                     GFYRLYPKEIEERIAHETEWSPERVARELPFAVRGP"
     gene            479..853
                     /locus_tag="VGA78_15200"
     CDS             479..853
                     /locus_tag="VGA78_15200"
                     /inference="COORDINATES: protein motif:HMM:NF037832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HEX9895274.1"
                     /translation="MGLPLRFYLDEDVGPRVAVIARGLGLDVVAAQEAGRTGLSDYDQ
                     LRQAGEDQRVLVTFNRNDFIHWTREFFRGGRPHYGVLILSRSLPRDQPERIAHALAEW
                     AAAATDRFNDPGDLAYLLDFVS"
     gene            1177..1749
                     /locus_tag="VGA78_15205"
     CDS             1177..1749
                     /locus_tag="VGA78_15205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895275.1"
                     /translation="MVSPRPFAILASIALALAACQESGSPLSHSPALLAIGQSCQAAE
                     AEGQTLGVNEFTFQSTPGSVLLLLDGSAAGPVTVTTYILAPPKATDDGVLIANTSHVV
                     ELSLAGDGACAAGEDCFATDDHAVLEPINPFGLFRLNSTMRIAAGFGRFATPREVPPL
                     QVHGTIQFPPPGVPVPPVATWELKGRVCGG"
     gene            1853..3952
                     /locus_tag="VGA78_15210"
     CDS             1853..3952
                     /locus_tag="VGA78_15210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895276.1"
                     /translation="MPAPLPSSDLLRCCLIAALAWAGQDVSAQTATGLVSGVTVESNL
                     PAAGFISRHQAIDLRLSGAIDPAARLAVLLGATDLTDLFRSTPGGLRYTPTVVPLSPG
                     EREMTVYLVRADGRWEELGRFPLRVRNAAGLDRWRAMPRLDLGLEGQLAQSQAPAEPA
                     PPRTTWQDFTGQLALETDAGRGPSRWTTQASVIGVSHQAGALRFAERADAAPQVDLSS
                     YLVRLGSGPAEVAIGHVSLGNQRHLISGFTSRGAAVRLTPGSRVELAAGLVNGSSIVG
                     WTNPVGLNDSDHRLLSGTLALEALTRPGGLRLELSGLSGSVRPQAGYNQGVVNDAESS
                     RGVGLRVTASDPTQRIRLETGFARSSFDNPDDSSLARGGTLVPVEEVTRNAHYVDAAV
                     DVLRAVRLGPERSASLALGFRRERVDPLYRSLGAFARADQETNQWEARATIAGLALQA
                     SHARSTDNLSHLASVLTSRTRRNLLAAELPLASLLGTTRTWLPLLSYGFDRTQQLGEG
                     VPENGGFSESHVPDQVSRNQTFTSTWNLRHLTFGYRLAHSLQDNRQPGREASDFANLI
                     HGATVGLTPLRSVSVDLSLDLERAENRETSAIDRTRRFGGRASVTPGSQSTLAFSLSH
                     TRAEDDAGLRRRLDTILDTQWSSTVPGLRRFGSRYYFRFSRTTGRVLDQAVGLDQSTE
                     RWSISSGFNLGLSPVTP"
     gene            3949..5232
                     /locus_tag="VGA78_15215"
     CDS             3949..5232
                     /locus_tag="VGA78_15215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895277.1"
                     /translation="MNPILRGLLLFPVGLLGLSSSGSGQIRRDPNGVNVNAQGASTVF
                     ITFGNLQGMVATEAEWCGELIPALPGVGLRCDPATVFGRLPARYDQSRSSGQDGFTDI
                     MSIPPSVARRAFQAAQAGATSSFFYVRRFIDPLGNRPDEYVFVTCRMTGGGARTPFAL
                     LDVRLAFETDDPVLSVRTGGQAPRLSARIVYHGTGRLRGRWEIVLPGEEPPTGEDLLT
                     EATLPAELRGTQRRFTELERFNLFLPPTGEFRLQGPDPAKLPTHLQGLHLVLLRIEAT
                     EDKEGDSNLGTAGAGSGVVPSGGVAGFAIPPLRYYVGSATGIGVGADGFGLLMPADRA
                     ELVPEAELVFGWTGAAGALLYRVEITNDAGHPVLEALLDADMRTYRAPSWLAERLGQP
                     EFRWRVAALGPGGRGLAATPWRRGRLTSAPPDQLH"
     gene            5242..6339
                     /locus_tag="VGA78_15220"
     CDS             5242..6339
                     /locus_tag="VGA78_15220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895278.1"
                     /translation="MHWCLRRVVGFAGLGLLLPLAAAPAQTIGKINTCHCNDPTGHGY
                     SASSNIPIFTGTNQLRFLGPGVELTMSVVVAGLPGTINARRPGELDVTMVIPAGFVSA
                     PATRAARLKYPIGQGDFQVRIIPRGTVSQITFPTSVTVSQPAWVEFRGSDIREAAFGI
                     ATPLSFGEVSGTRTFTATTYRTQLRFQNCGKYLVGAFHLHQASAPLKEIQNRNAQYLG
                     TTTRSVTVTGCTAARTVVDIEQNRFALSAPVTTATGSPLAQNGCQSLEHTFRWTAVTG
                     ATGYQIQLRLADGRTRNGTALTNSWTPSWRGPAIPAGTTSWTVRPYQSVLTATTEERY
                     FGPWATSRAFTVTAYQATPTSGTIGAFVCAY"
     gene            6383..7015
                     /locus_tag="VGA78_15225"
     CDS             6383..7015
                     /locus_tag="VGA78_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895279.1"
                     /translation="MKVIALVLVPGTLLGMSVLPLTLTSVSVTPGSLNVGQSATGSVR
                     FDAPVGIGTRVTLSSKPTTVATVPSSVRMLAGATSVNFTVSTLSAGCAKVFVTSGNVT
                     RFTDLWVHSVSGSVRLTTDKVAAQLPATFTGTVSITRPRGSTTSLGGDLVSLSSSNPA
                     VASVPRSVTVPAGATTASFAIRPTGYGCAVITASYSGGTSRRAMSVLADG"
     gene            complement(7033..7590)
                     /locus_tag="VGA78_15230"
     CDS             complement(7033..7590)
                     /locus_tag="VGA78_15230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HEX9895280.1"
                     /translation="MTDPPAEADDRLLRAAREGDKTALDALFALAYEELRRLARRVRR
                     RDGDTLTTTALVHEAYLKLAPAGRLPANDRAHFRFLIGRAMRQVLVDSARRRLSQKRG
                     GSDICVTLDDDAHTEPLSPARLIDVNGALEQLERLDPRRAAVVECRFFAGLDVEETAT
                     ALQLSTATVKRDWRVARAWLARAVE"
     gene            complement(7587..10112)
                     /locus_tag="VGA78_15235"
     CDS             complement(7587..10112)
                     /locus_tag="VGA78_15235"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895281.1"
                     /translation="MSPSPSSLDPEQWALAVSLFEQIAEAGPAAQEAVRSRLADAPEP
                     VRELVRQMLDSDRASHTLLDGGVDRLSHLTTAAGEPASRAGHRLGPYRIIRELGRGGM
                     GVVYVAEREAADFKQTVALKCLPLGAAGTAQVQRFVRERRILAGLVHPHIAQLYDGGI
                     TESGEPYFVMEYVEGIRVDRYADREQLDLEQRLRLFLTVCQAVQFAHQHLVVHRDLKP
                     ANVLVTTDGHVKLLDFGIAKLLEAEGSDTSATAPALTPEYASPEQLRGEPVTVATDVF
                     SLGLILFELLTGRRAFIPAPGPLGVVHAILECEPARASVAAGANHRLSRRLRGDLDTI
                     LEKALRKDPAHRYLAVQALHDDIRRHLDGRPVLARRAGRLSRLAGFTRRHRLAVTAGV
                     AVTLALIGGLGVALWQGSVAARERDAARIETAKSRATTQFLQQLLGDAYPSVARGQQF
                     SMTDLLHRAVDRIDSLGNQPDLQAQLLRTLGDVYREQGRFDEALALLERAVVLYQAAG
                     QSRSREAGSVLSALGQLHYEKKDFQAAFRTHREELALVQALLAPDDSLVLYAMNNLAA
                     AASALGQHDTALQMHQEVLSRRRRFFADTSQLVHVSHNNLGDLHSQMGNLAEAEREFS
                     EALTLRRAALPPDHPSIALTLNNLGTTLVDLGRFEEAERLHRESLAIWQRVYGPEHHR
                     VGLGAYNLAKVLERTGRLAGAESLYRVSLAIDKKSYGARHLDVGLDLRNVGLVQSRMG
                     NCPVAVRTLKEADAIFAHNGVAPGHRRRITTRGAAGSCLVLMGRYPEAERTLLEVYRA
                     AHLPDATVDSATAREARERVVDLYLAWGRPGQADRYRAEPGSQ"
     gene            10304..10855
                     /locus_tag="VGA78_15240"
     CDS             10304..10855
                     /locus_tag="VGA78_15240"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX9895282.1"
                     /translation="MSYPHALTAAELLRLNLSTKRTELVRGVLRVREPASYRHGELTV
                     ALTLAIGKHVEAHDLGRVLAAETGFKLTADPDTVRAPDLAFIRSDRLPDPAPQGYAEL
                     APDLVVEVLSPADRPGEVLARVGDWLTAGTRLVWVVDPIREVVRVYRADGSDTVASKD
                     ANLAGEDVLPGFTCALALLFRSG"
     gene            10957..11208
                     /locus_tag="VGA78_15245"
     CDS             10957..11208
                     /locus_tag="VGA78_15245"
                     /inference="COORDINATES: protein motif:HMM:NF019324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEX9895283.1"
                     /translation="MPLSIKDPETERLARILAKATGESLTEAIRQALRERLARTEARP
                     RRDLAGAVRRIQERLARLPVRDPRSPDEILGYDERGLLG"
     gene            11212..11604
                     /locus_tag="VGA78_15250"
     CDS             11212..11604
                     /locus_tag="VGA78_15250"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX9895284.1"
                     /translation="MVLDTSAVIAILTSDPSASRLLTAIEGAPIRRIATASVVESAMV
                     LLALWDETAEPQLDLFLRTIGAEVVPVGEEHMLLARDAAVRFGKGRHPAGLNFGDCFS
                     YALAVAAGEPLLFVGEDFGRTDVIVAAW"
     gene            12158..>12576
                     /locus_tag="VGA78_15255"
     CDS             12158..>12576
                     /locus_tag="VGA78_15255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895285.1"
                     /translation="MHAARLLFASLALSATPAGAQVIAIRAGGLVDPEAGTITRNQVI
                     VVENGRFTAIGANVAIPAGAEVIDLSQLVVLPGLVDAHNHLALTYKETPEHNLYYLTY
                     VLDGTPLRAIQAVSNGIQMLNAGFTIIRDMGNAGNYA"
BASE COUNT         1975 a         4301 c         4174 g         2126 t
ORIGIN      
        1 cttgcagtcg ccgcggcgtc cagcgacatt gtatgacagt gtaagacaga ggcatacagt
       61 gtcagtcacc aagagtcttc gagtacccca ggagctggat cgcgaaatcc ggcgagagct
      121 caagcgctcc ggcatcaagg aatggtcggc cggggtcatc cagctcatca ccgaagccct
      181 ccagatgcgg cgggcgccgg ggatcgtgtt cgtggacagt ccctccgggc gtcgggccgt
      241 cattggcggt accggcatcg atgtctggga gatcgtcgcg gcctggcaat cggtggcgaa
      301 ggacttcgag cgcctgcgcg ccgtctacga ctggctgcct gagtcccaac ttcgtgcggc
      361 gctcggcttc taccggctgt atcccaagga aatcgaggag cggatcgcgc atgagacgga
      421 gtggagccct gaacgggtcg cacgggagct cccctttgcg gttcgtggcc catgacgaat
      481 ggggctcccc ctccgtttct acctggacga ggacgtgggc ccgcgggtgg cggtgatcgc
      541 ccgcggtctt ggtctcgatg tggtggcggc gcaggaagcc ggccgcactg gcctctccga
      601 ttacgaccaa ctccggcagg ccggcgagga ccaacgagtg ctcgtgacct tcaaccggaa
      661 tgacttcatc cactggacca gagagttctt ccggggcggg cggccgcact acggcgtgct
      721 gattctttcc cgctcgttgc cacgggatca gcccgaacgc atcgcgcacg ccttggcgga
      781 gtgggccgcc gcggcgacgg accgattcaa cgatcccggg gatctcgcct acctgctcga
      841 tttcgtgtcc tgatcgttag atacccgcac gtcctcgtag cctgcctgcc cgcagtgacc
      901 cgctcgcact cacaaggcag ccctgcatgc ctcaacccgc gcagccggcc tcgccctggc
      961 cgactgtttc tgtctggctc tggcccatca gcgtggggcg gaggtgctca cggccgaccg
     1021 agcctggagc aaggtcaaag ccggcgtgcc gatcaccgtc atccgctagc aaccgcagtc
     1081 ccgagacaac caggggactt ctgagcccgg ccgacggcgt tttgcgcaga gagagaggta
     1141 aacactcttc cacgtcgacc ccacgccgga ggctccatgg tcagcccacg cccgttcgcg
     1201 attctcgcat ccatagccct ggccctggcg gcctgccagg aatcggggag cccgctgtcc
     1261 cactcgccgg cgctgctcgc aatcgggcag agctgccagg cggccgaagc ggaggggcag
     1321 accttgggag tcaacgagtt caccttccag agcacacccg ggagcgtgct gctcctgctc
     1381 gatgggtccg ctgccggtcc agtcaccgtg actacctata tcctcgctcc acccaaggcg
     1441 acggacgatg gcgtgctcat cgccaatacc tctcatgtgg tggagctctc cctcgcgggt
     1501 gacggcgcgt gcgctgcggg ggaagactgt ttcgccaccg atgaccacgc ggtgcttgaa
     1561 ccgatcaacc cgttcggtct cttccggctc aactccacca tgcggatcgc cgccggtttc
     1621 ggacgatttg cgaccccgcg tgaggtgccg ccgctccagg tccacggcac catccagttc
     1681 cctccgccgg gcgtgccggt gccaccggtc gcgacctggg agctcaaagg cagggtctgc
     1741 ggagggtagt cagggcccgc gagggtcggc ggagctgacg ctgatgatcc ctccatcgcc
     1801 ccaaatccgc atttctctct gacaccgttt cagatctccc gacgaggaat gcatgccggc
     1861 accgctgcca tcatcggatc tgctccgctg ctgcctgatc gcggctctgg cctgggccgg
     1921 ccaggacgtc tcggcgcaga cagccaccgg tctggtgtcc ggcgtgacgg tcgaatccaa
     1981 cctgccggcc gcgggcttca tctcgcgcca ccaggcgatc gaccttcgcc tgagcggtgc
     2041 catcgacccc gctgcccggc tggcggtgtt gctcggggcg accgatctca ccgacctctt
     2101 ccggtccact cccgggggac ttcggtatac cccgacggta gtcccgctca gcccgggcga
     2161 gcgggagatg acggtgtacc tggtccgggc cgatggacgg tgggaggagt tggggcggtt
     2221 tccccttcgg gttcgcaacg cagccggtct ggaccggtgg cgcgcgatgc cgcgtttgga
     2281 tctgggcctc gaaggtcagc tggctcagag ccaggctccc gccgagcccg ctccgcctcg
     2341 aaccacctgg caggacttca ccggacaact ggcgctcgaa accgacgcgg gccgcggccc
     2401 gagccggtgg accacccagg cgagtgtcat cggagtgagt catcaggcgg gtgcgctccg
     2461 gttcgcggag cgggcggacg cggcgcctca ggtggacctg tccagttacc tggtccgact
     2521 cggcagcggc ccggccgagg tggcgatcgg gcatgtctcg ctcgggaatc agcggcacct
     2581 gatcagcggt ttcaccagcc ggggcgcggc ggtcaggttg acacccggat cccgggtgga
     2641 gctcgccgcc ggactggtca acggatccag catcgtcggc tggaccaacc cggtgggact
     2701 gaacgactcc gatcatcggc tgctgagtgg aacactcgcg ctcgaggcct tgacacggcc
     2761 gggagggttg cgcctcgaac tctccggctt gagcggctcg gtgcggcctc aggccggata
     2821 taaccagggc gtggtcaacg acgccgagtc gagccgcggg gttgggttgc gagtgacggc
     2881 gtcggatccg acccagcgga tccggctcga aaccggtttc gcccgcagca gcttcgacaa
     2941 tcccgacgat tcgagcctgg cccggggcgg cacactggtt ccggtggagg aagtcacccg
     3001 gaacgcccac tacgtggacg ccgcggtgga cgtcctccgt gcagtccggc tcggtccgga
     3061 gcggagcgcc agcctggcgc tcgggttccg ccgcgagcgg gtcgatccgc tctatcgcag
     3121 cctgggtgcg ttcgcccggg cggatcagga aaccaatcaa tgggaggcgc gcgcgaccat
     3181 cgccggcctg gccctgcaag ccagtcacgc ccgttcgacc gacaacctgt cgcacctggc
     3241 gtcggtgctg accagccgga cccggcgcaa cctgctggcg gcagagctgc cgctggcgtc
     3301 gctgctggga accacgcgga cctggcttcc cctcctgtcg tatgggttcg accggaccca
     3361 gcagctgggc gagggggtgc ccgaaaacgg agggttctcg gagtcgcacg tgccggacca
     3421 ggtgagccgg aaccagacgt tcaccagcac ctggaatctg cggcacctca cgttcggcta
     3481 ccggctggcg cattcgctgc aggacaatcg ccagccgggt cgcgaggcat cggactttgc
     3541 caatctgatt catggcgcca ccgtgggact gacgccgctc cgctcggtgt ccgtcgacct
     3601 ctcgctcgac ctggagcggg ccgagaaccg cgaaaccagt gcgatcgacc ggacccgacg
     3661 cttcggtggg cgcgccagtg tcactcccgg gagccaatcg actctggcgt tctcgctctc
     3721 gcatacccgg gccgaggacg acgccggtct gcgtcgccgg ctcgatacga tcctcgatac
     3781 ccagtggtcg tccaccgttc cgggtctgcg gcgattcggc agccggtact acttccggtt
     3841 ctcacgaacc accggtcgag tgctggatca ggcggtcgga ctggatcagt cgaccgagcg
     3901 ctggtcgatc agctccggct tcaacctcgg cctctctccg gtcactccat gaatccgatc
     3961 ctgcgtggcc tgctcctgtt cccggtgggg ctgctcggtc tgtcgtcgtc gggtagcggg
     4021 cagatccggc gcgatccgaa cggcgtgaac gtcaacgccc agggcgccag caccgtcttc
     4081 atcacctttg gaaacctgca aggcatggtt gcgaccgagg cggagtggtg cggcgagctg
     4141 attccagcac tgccgggggt gggactgcgc tgtgaccccg ccaccgtctt cggccggctg
     4201 ccggctcgat acgaccaatc ccgttccagc ggacaggacg gcttcacgga catcatgtcc
     4261 attccaccgt cggtggcgcg gcgcgccttt caggccgccc aggccggcgc gacctcgagc
     4321 ttcttctacg tcaggcgctt cattgacccg ctggggaacc ggcccgacga atacgtgttc
     4381 gtcacctgcc gcatgaccgg tggcggtgcc cgcacgccgt tcgccctcct ggacgtgcgc
     4441 ctggcattcg agaccgacga tccggtgctc tccgtccgca ccggcggcca ggcgccccgt
     4501 ctttccgccc ggattgtcta ccacggcacc ggccggctgc gcggccggtg ggagatcgtg
     4561 cttccgggcg aggagccgcc caccggcgag gatctgctca ccgaagccac gctgccggcc
     4621 gagttgcggg gaacccagcg gcggttcacc gaactggagc gcttcaacct gtttctccca
     4681 ccgaccgggg agttccggct acaggggccc gatcccgcca agctcccgac ccatctccag
     4741 gggcttcatc tggtgctgct tcggatagag gccaccgagg acaaggaggg ggattcgaat
     4801 ctcggtaccg ccggcgccgg atcgggtgtc gtgccgagcg gcggtgtcgc cgggttcgcc
     4861 attccgccgc tccgctacta cgtggggagc gccaccggca tcggggtggg ggcggacggc
     4921 tttggcttgc tcatgccggc cgaccgggcc gagctggtgc ctgaggcgga gctggtgttc
     4981 ggctggaccg gcgccgcggg cgcattgctc taccgggtgg agatcaccaa tgacgcgggc
     5041 cacccggtgc tggaggcgtt gctcgacgcc gatatgagaa cctatcgcgc cccgtcgtgg
     5101 ctggcggagc ggctgggcca accggaattc cgctggcggg tcgccgccct ggggcccggg
     5161 ggccgcggcc tggcggctac cccctggcgc cgcgggcgcc taacgtcggc cccacccgat
     5221 cagctccact aggaggaacc catgcattgg tgcctgagac gtgtcgtcgg cttcgccggc
     5281 ctgggcctgt tgctgccgct ggctgccgca ccggcccaga cgattgggaa gatcaatacc
     5341 tgtcactgca atgacccgac cgggcatggc tactcggcga gctcgaacat tcccatcttc
     5401 accggcacca accaactccg cttcctcggc ccgggcgtcg agctgaccat gtcggtggtg
     5461 gtggccggac tccccgggac catcaacgcc cggcgaccgg gcgagctcga cgtcaccatg
     5521 gtgattccgg ccgggtttgt cagcgcgccc gccacccgag ccgcgcggct caagtatccc
     5581 atcggccagg gcgacttcca ggttcgcatc attcctcgcg gaacggtcag ccagatcacg
     5641 tttcccacct ccgtaacggt cagtcagccc gcatgggtcg aattccgagg ctccgatatt
     5701 cgtgaggcgg cgttcggcat cgcgaccccg ctttccttcg gagaggtgtc cggcacccgc
     5761 acgttcaccg caacgaccta tcgcacccag cttcgattcc agaactgtgg caagtacctg
     5821 gtgggtgcct ttcacctgca ccaggccagc gcaccgctca aggagatcca gaaccggaac
     5881 gcacagtatc tggggacgac gacccggagc gtcacggtca cgggatgcac tgccgcccgg
     5941 acggtggtcg atatcgagca gaaccggttc gctctgtcgg caccggtgac gacggcgacc
     6001 ggctcgccgc tggcccagaa cggctgccag agtctggagc acaccttccg ctggaccgct
     6061 gtgaccggtg cgaccggata tcagatccag ctcaggctcg cggacggccg cacccgcaac
     6121 gggactgcgc tgacgaattc ctggaccccg agctggcgag ggcccgcgat accagccgga
     6181 acgacgtcct ggacagtccg cccctaccag tcggtgctca cggcgaccac cgaggaacgc
     6241 tatttcggcc cttgggccac cagtcgcgcg ttcaccgtga ccgcctatca agcgacaccg
     6301 acctcgggga ccatcggggc gttcgtttgc gcctactgac cagcaaccgt ccgcaatcat
     6361 tcaccttatt caggagctca ctatgaaggt catcgcgctg gtgctggtgc ccggcacctt
     6421 gctcggaatg tcggttctgc cgctcacgct gacgtcagtc agcgtgacac ccggcagcct
     6481 caacgtggga cagagcgcca ctggctccgt gagattcgac gcaccggtag gcatcgggac
     6541 ccgggttacc ctcagcagca agccgacaac ggtggcaact gtccccagca gcgtcaggat
     6601 gctggcgggc gccaccagcg tcaacttcac cgtgagcacg ctgtcggccg gctgcgccaa
     6661 ggtgttcgtg accagtggca acgtcacccg cttcacggac ctctgggtcc attccgtgtc
     6721 gggctcggtc cggctcacca ccgacaaggt cgccgctcag ctgccggcaa ccttcaccgg
     6781 gacggtgtcg atcacgcggc cgcgcgggag taccacctca ctgggcggcg acctggtgtc
     6841 gctttcgagc agcaacccag ccgtggcgtc ggtcccgagg tcggtcacgg tgccggccgg
     6901 cgccaccacg gcgagcttcg ctatcaggcc cacgggatat ggctgcgccg tcatcacggc
     6961 aagctacagc ggcggaacca gccggcgggc gatgtcggtt ctggcggatg gataatcgga
     7021 gcggtgtcga gcttactcca cggcccgggc cagccaggcc cgagccaccc gccagtcgcg
     7081 tttgaccgtg gcggtggaga gctggagggc ggtcgcggtt tcctcgacat cgaggccggc
     7141 gaagaagcgg cactcgacta ccgccgcgcg gcgagggtcg agccgttcca gctgctccag
     7201 cgcgccgttg acgtcgatga gcctggccgg gctgaggggt tcggtgtggg cgtcgtcgtc
     7261 gagggtgacg cagatgtcgg agccgccccg cttctgactc aggcgccggc gggccgagtc
     7321 gaccagcacc tgccgcatgg cccggccgat caggaagcgg aagtgagccc ggtcgttggc
     7381 ggggagccgt ccggcgggcg cgagcttgag gtaggcctca tggaccagcg cggtggtagt
     7441 gagggtgtca ccgtcgcggc gccggacccg gcgcgccagc cggcgcagct cctcgtaggc
     7501 cagggcaaac agcgcgtcga gggcggtctt gtcaccttcg cgcgcggccc gcaacaaccg
     7561 gtcgtcggct tctgctggtg ggtctgtcac tgcgatcccg gttcggcccg ataccgatca
     7621 gcctggccgg gacgacccca tgccaggtac aggtccacca cccgttcccg ggcttcccgc
     7681 gccgtggccg agtcgaccgt cgcatcgggc aggtgagcgg cgcgatacac ctccagcaag
     7741 gtccgttcgg cttcagggta gcggcccatc agaaccaggc aggagcccgc ggctccccga
     7801 gtggtaatcc ggcgccggtg acccggcgcc acaccgttat gcgcgaagat ggcatcggcc
     7861 tccttcaagg tccgcaccgc gacggggcag ttgcccatgc ggctctggac caggcccacg
     7921 ttccgaagat ccagccccac gtcgaggtgc cgcgcgccgt aactcttctt atcgatggcg
     7981 agactcactc gatagagcga ctcggcccct gccaggcggc cggtccgctc cagcactttc
     8041 gccaggttgt aggcacccaa cccgacccgg tgatgctccg ggccgtacac ccgctgccag
     8101 atcgccagcg attcccggtg cagccgttcg gcttcctcga accggcccag gtccaccagg
     8161 gtggtcccga ggttgttgag ggtgagtgca atcgagggat gatccggggg aagggcggcg
     8221 cgacggagcg tcagcgcttc ggagaactcg cgctcggcct cggccaggtt ccccatctgg
     8281 gaatggaggt ctcccaggtt gttgtgcgag acgtggacca gctggctggt atcggcgaag
     8341 aagcgacgcc ggcgcgacag cacctcctgg tgcatctgga gcgcggtgtc gtgttgcccc
     8401 agcgcgctcg cagccgcggc caggttgttc atcgcgtaca gcaccagcga atcatccggc
     8461 gccagcaacg cctggacgag ggccagctcc tcccgatggg tccggaaggc ggcctggaaa
     8521 tcctttttct cgtaatgcag ctggcctaac gcactcagga cgctgccggc ctcgcggctt
     8581 cgggactggc cggcggcctg atagagcacc acggcgcgtt ccagcagagc cagcgcctcg
     8641 tcgaagcggc cctgttcccg atagacgtcg cccagggttc tgagcaactg ggcctggagg
     8701 tcgggctggt tccccagtga gtcgattcgg tcgaccgctc ggtggagcag atcggtcatc
     8761 gagaactgct ggcctcgtgc cacgctgggg taggcatcgc ccagcaactg ttgcaggaac
     8821 tgggtcgtgg cgcgcgactt ggcggtctcg atccgggccg cgtcccgctc ccgggccgcg
     8881 acgctccctt gccagagtgc gacacccagt ccgccgatca gggcgagggt cacggccacc
     8941 ccggcggtca cggccagccg gtgccgccgg gtgaagccgg ccaggcggga cagtcgaccg
     9001 gcgcggcgcg ccagcaccgg ccggccgtcc aggtgccggc ggatgtcgtc gtgcagcgcc
     9061 tgcacggcca ggtaccggtg agccgggtcc ttccggagcg ctttctccag aatcgtgtcc
     9121 aggtcgccgc ggagccgacg cgacagccgg tgattcgccc cggcggccac gctggcgcgg
     9181 gcgggctcgc attccagaat ggcgtgaacc acaccgagcg ggcccggggc ggggataaag
     9241 gcgcgccgac cggtcagcag ctcgaacagg atcaggccta acgagaagac gtcggttgcc
     9301 accgtgaccg gttcaccccg cagctgctcc ggactggcgt attcgggcgt caacgccggc
     9361 gcggtggcag acgtgtcgct tccctcggct tccagcagct tggcgatacc aaagtcgagc
     9421 agcttgacgt gtccatcggt ggtgaccagc acgttggccg gcttgagatc gcggtgcacc
     9481 accaggtgct ggtgagcgaa ttgcaccgcc tggcacacgg tcaggaaaag gcgcagccgc
     9541 tgctccagat cgagctgctc ccggtcggca taccgatcga cccggatccc ctcgacgtat
     9601 tccatcacga agtacggctc acccgactcg gtgatgccgc cgtcgtagag ttgggcgata
     9661 tggggatgga ccaggcccgc caggatgcgc cgctcgcgga cgaaccgctg gacctgcgcc
     9721 gtgcccgccg cccccagggg aaggcatttg agcgccaccg tctgcttgaa atccgcggcc
     9781 tcgcgctcgg ccacatatac gacacccatg ccgccgcggc ccagttcgcg gatgatccgg
     9841 tacggaccca ggcgatggcc ggcccgggac gccggctcac cggcagctgt ggtcaggtgg
     9901 ctcagccggt ccaccccgcc atcgagcagg gtgtgggagg cccggtcact gtccagcatc
     9961 tgccgaacca gctcccggac cggttcgggc gcgtcagcca gtcgggaccg aaccgcctcc
    10021 tgtgcagctg gaccggcctc ggcgatctgc tcgaacagag agacggccag ggcccactgt
    10081 tcggggtcca gggacgacgg ggaagggctc atggtaggtg cgttccgaat gtaccgtcgg
    10141 aagagcggcc cgccagtcgg cgatcctgct ttcaccgccg actgctgagt cacgccggcg
    10201 gatttccggc aactatcgca ggttctcaaa gacctgcgtc gcgttttctt ggtgatgtcc
    10261 cggcctgccg ttgcattatt gttggaaagt gctggaaccc gagatgagct atccccacgc
    10321 gctcacggct gctgagctgc ttcggctcaa cttgtcgacg aagcgcaccg agctggtgcg
    10381 aggtgtgttg agggttcgcg agcccgcgag ctatcggcac ggcgagctga ctgtggcgct
    10441 cacgcttgcg atcgggaagc acgtcgaggc ccatgatctg ggccgcgttc tggccgcgga
    10501 gacgggcttc aagctgaccg ctgatcccga caccgtccga gcccccgacc tcgcgttcat
    10561 tcgcagcgac cgcctcccgg atcccgctcc ccagggatac gccgagctgg cgccggatct
    10621 cgtggtcgag gtgctgtcgc ccgccgaccg gcccggcgag gtgctcgcta gagtgggcga
    10681 ctggttgacc gcggggaccc gtctggtgtg ggtggtggac ccgatccgcg aagtggttcg
    10741 agtttaccgg gccgacggta gcgacacggt ggcgtcgaag gacgcgaatc tcgccgggga
    10801 ggacgtgctc cccggcttca cctgcgcgct cgcgttgctt tttcgctccg ggtagcgcca
    10861 ccaaagtgac cccttcggag gctcgtgatg gtcggcctcc tttgctccaa ccctcccagc
    10921 gtgtatatat tagtagaaat cagtatagac aggtatatgc ccctcagcat caaagaccct
    10981 gaaacggaac ggctggctcg gattcttgcc aaggccaccg gggagtcgct caccgaggcc
    11041 atcaggcaag ccctgcggga gcggctggcg cggactgaag cccgacctcg cagggacctg
    11101 gccggagccg tccgccgtat tcaggagcga ctcgcccggc tgccggttcg cgacccccgt
    11161 tcgcccgacg agattctcgg ctacgatgag cgcggtctcc tcggctgatt cgtggttctc
    11221 gatacctccg cggtcatcgc gatcctcacc agcgaccctt cggccagccg ccttctcacc
    11281 gcgatcgaag gggccccgat ccggcggatc gccactgcct cggtggtaga gtccgctatg
    11341 gtgttgctcg ccctttggga cgaaaccgcc gagccccaac tcgatctgtt tcttcgtacc
    11401 atcggagcgg aggtggtgcc ggtgggcgaa gaacacatgt tgctggcgcg ggatgccgcg
    11461 gtgcgcttcg ggaaaggccg tcaccccgcc ggcctcaact tcggggactg cttcagctat
    11521 gctctggcgg ttgcagccgg ggagccactc ctgtttgtgg gcgaggactt cggtcggacc
    11581 gatgtgatcg tcgcggcgtg gtaaacctta gctccaggaa tcccgtcccc tttgggtgat
    11641 ggcggctgtc ttcgatgccc actgctcgcg tcagccagcc actcctgtga ggccaaaacc
    11701 tggcggacat ggctgcgact cgtcgcccga atcgtccgtg tagacaacgg ggaacttctt
    11761 gggccccgat ggggggtttt tccggcagac cagaccattc ccattgcggt cggcgccctc
    11821 cgcggttggg aattcctccg ccgagagagc gggaacgagt gccggggcca gaatccgatc
    11881 cggtcctgcg ctgcagccga cagcggcgaa cgcgagcagg aggccgtggg accacgtttg
    11941 cataaacacc tccgttgaga cggggtgacc ggtccagggg gtggaagtcg atccgcgccc
    12001 tatcatccaa aaacgaaatc gggtacccga agcggacagt cctcctcgcg atgccccacg
    12061 atcgaccatt attccccatc ttcacaactt gacaccgggc cttgcgggca tccttcatcc
    12121 acgctggtcc ccgacgtcta tccccaggag tgttcgaatg cacgccgctc gcctgctctt
    12181 tgcctcactt gccctctctg ccacgccagc cggggcgcag gttatcgcca tccgcgccgg
    12241 cggcctggtg gatcccgagg ccggtaccat tacccgcaac caggtgatcg tggttgagaa
    12301 cggccggttc accgcgatag gcgccaacgt cgctatcccg gccggggccg aggtgatcga
    12361 cctctcccag ctggtggtgc tcccggggct ggtggacgcg cataaccatc tggcgctcac
    12421 ctacaaggaa acgcccgagc acaacctcta ctacctgacc tacgtgctcg acggcacgcc
    12481 gttgcgcgcc atccaggcgg tctcgaacgg catccagatg ctgaatgccg ggttcaccat
    12541 cattcgcgac atgggtaacg ccggcaacta tgccga
//
LOCUS       DASWKS010000532         4360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3590100, whole genome shotgun sequence.
ACCESSION   DASWKS010000532 DASWKS010000000
VERSION     DASWKS010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4360
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3590100"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2259)
                     /locus_tag="VGA78_15260"
     CDS             complement(<1..2259)
                     /locus_tag="VGA78_15260"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895286.1"
                     /translation="MKRFRFGPRRADVPADVRREIELHLELRAREFEQQGMSPDQARR
                     AAAAAFGDRREIETELQGLREKTVRTLQWRSWLDALRQDLSLALRTLRRAPLFTLVAL
                     ATLTLGIGANVAVFSVVRSVLLRPLPYPNAHELVGVWTDHRSRGREQPEWFGAIDFAD
                     YRDGNRTFSGMAAYSGWGPNLTGGGDPEALVGGAVSWNLIDVLGARIALGRSFARQDD
                     HAGAERVVMLTDGLWRRRFNADPGVLGQAIQLNGEPWTVVGVLSPEFRAQFPWQILRP
                     LRRPVPDPSGREAFFLRVIGRLNPGVSVEQAHADLSIVADRLAREFPESNAGIKPWLI
                     PYQEQLTGPVRRPLLALLGAVGFVLLLACANLAGLLVVRAGGRVREFGVRAALGAGHR
                     RIVRQLLTENLVLAGLGGGLGFALGWAGSRLFAALIPPNVLLVTRIGPDWTVLLFALG
                     LTLVSALLFGLLPAAQAGSSSLMNVLRSSHSESGRRVGRVRSGLVVMELAIAVMLLVG
                     AGLLMRSFLALQQADLGYRTEGLLSVGMTLPRQKYPDLGAANLAVEDVLARTRAHPDV
                     RAIEATDQPPLAGGGDQDISVYPDARPVAAGQRAPGVWYRTVTPDYMKLMEMRLVEGR
                     LFTAEDRAGSLPVGILNQEAARRIFPDGRVLGRLLATGEDSTADRITIVGVVASARPD
                     GPNQPVKSELFILLSQFPVRGVVLVVEPARDQAAAVNAVRTGLKEVDGEVPLGAVGTI
                     GQAFADVTAIPRY"
     gene            complement(2267..2599)
                     /locus_tag="VGA78_15265"
     CDS             complement(2267..2599)
                     /locus_tag="VGA78_15265"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9895287.1"
                     /translation="MAGSDLFTGSLDLLIFKALSWGPLHGYAIGRWIRQWTEEVMPVQ
                     EGALYPALHRLERRGYLEEEWGITDSNREAKFYRLTREGRKQLKADTERWRSYSRIMQ
                     AALNAARP"
     gene            complement(2738..>4360)
                     /gene="recN"
                     /locus_tag="VGA78_15270"
     CDS             complement(2738..>4360)
                     /gene="recN"
                     /locus_tag="VGA78_15270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEX9895288.1"
                     /translation="TGETGAGKSMLVDALALLLGARADAGAVRPGAARTLVEGAFEPL
                     TPPLRRELDALGLEAGDDRLIIRREVMSEGRSRAWVNGSPATAGGLSQLGRWLVDLHG
                     QYETQTLLQAERQRDVLDAFGDAEPEARAVANAWEAVQQLAKEEATLSARRDEVRRRA
                     DYLRHVVQEIDAARLRPGEDESLDLEARRLSQAGTLTDLARRIADAVDGEDGSALSAL
                     AQADRALSALERTDPGAAAWRELLDAAFANVQELGKLASDYAEELAEDPARLAELERR
                     RDVIYRLKQKHGETISAILETRRQAGDELDLLDTADLDLKLIADRRKSGAAELERLAG
                     ILSEKRRAAAERLARAVNRLLPRLGLPGGRLGVDLAALEQAGSAGAETVQFLIRLNQG
                     MEPRLLARSASGGELSRLMLAIKTALGRHDAVPTLVFDEIDAGVGGEVGGRVGETLAE
                     VAERHQVLVITHLPQIAAAADRHLVVAKRTKGGLATSDVGVIHGEDRVTELARMLGDP
                     DAETARRHAVALLREQGTGSRKPGAGSRRQEG"
BASE COUNT          697 a         1597 c         1446 g          620 t
ORIGIN      
        1 gtaacgcggg atcgcggtca cgtcggcgaa ggcctgaccg atggtcccaa ccgcacccag
       61 ggggacttcg ccgtcgactt ccttgagccc ggtgcgaacc gcgtttaccg cggcggcttg
      121 atcccgggcc ggctccacca ccaggacgac accccggacc gggaactgag acagcaagat
      181 gaagagctcg ctcttgaccg gctggttcgg cccatcgggc cgagccgagg caaccacgcc
      241 gacgatggta atgcggtcgg cggttgagtc ctcccccgtg gcgagcagcc gccccagcac
      301 ccggccatcg gggaaaatcc tccgggccgc ttcctgattc aggataccca ccgggagaga
      361 accggcccga tcctccgcgg taaacaggcg gccttccacc agccgcattt ccatcagctt
      421 catgtaatcc ggggtgaccg tccggtacca gacgcccggc gcgcgctgtc ccgccgcgac
      481 cggccgggcg tcaggataga ccgaaatgtc ctgatcgccg ccaccagcca ggggtggctg
      541 gtcggtcgct tcgatggccc ggacatcggg gtgagcccga gtccgagcga gcacgtcctc
      601 gaccgccagg ttggccgccc cgagatcagg gtatttctgc cggggtaaag tcatgcccac
      661 tgacagcagc ccctcggttc gatagcccag gtcggcctgt tgcagcgcga ggaaactccg
      721 catcagcagc cctgccccca ccagcagcat caccgcgatg gcgagctcca tcaccaccag
      781 cccgctcctg acccgcccca cccggcgccc gctctcggaa tgagagcttc ggaggacatt
      841 catcaggctg ctggagccgg cctgggccgc cggcagcagc ccgaacagca gcgccgagac
      901 cagagtcaac ccgagggcaa acagcaggac tgtccagtcg gggccgatgc gagtcaccag
      961 caggacgtta ggcgggatca aggcggcgaa cagccgggac ccggcccacc ccagcgcgaa
     1021 gccgagcccc cctccgagcc cggcgagcac caggttctcg gtcagcagct gccgcacgat
     1081 ccgccggtgc ccggcgccca gggcggcccg gacgccgaac tcgcggaccc ggccgccggc
     1141 ccggaccacc agcagccccg ccaggttggc gcaggcgagc agaagcacga agcccaccgc
     1201 gccgagcagc gccaggagcg ggcggcggac cggtccggtc agttgctcct gatagggtat
     1261 cagccagggc ttgattccgg cgttgctctc cggaaactcg cgggccaggc ggtcggccac
     1321 gatcgaaaga tcggcatggg cttgttcgac cgagacgccg gggttgagac gcccgatcac
     1381 gcgaaggaag aatgcctcgc gaccggaggg gtccggcacc gggcgcctga gcggccgcag
     1441 aatctgccag gggaactggg cccgaaactc gggcgagagc actcccacca cggtccaggg
     1501 ctcgccgttc aactggatgg cctgccccag gacgccggga tcggcgttga agcggcgccg
     1561 ccataagcca tcggtgagca tcaccacccg ttccgcgccg gcatgatcgt cctgccgggc
     1621 aaagctccgg cccagcgcta tccgggcgcc cagcacatcg atcaggttcc agctgaccgc
     1681 gccgccgacc agcgcctcag gatcaccacc accggtgaga ttgggtcccc agccggaata
     1741 cgccgccatc ccgctgaacg tgcgattgcc atcgcggtag tcggcgaaat cgatggcccc
     1801 gaaccactcg ggttgctccc ggccgcggga acggtggtcg gtccagaccc ccaccagctc
     1861 gtgggcattg gggtacggca gcggccggag cagcaccgag cgcaccacgc tgaagacggc
     1921 cacgttggcg ccgatgccga gggtcagggt cgccagagcc accagcgtga agagcggagc
     1981 gcgccgcagg gtccgaagcg ccagggatag atcctgccgc aaagcatcca gccaactccg
     2041 ccattgcagt gtccgcaccg ttttctcccg taagccctga agctcggtct cgatttcgcg
     2101 ccggtccccg aaggcggctg cggccgcccg ccgggcctga tccggactca tcccctgctg
     2161 ctcgaattcc cgggcccgga gctccaggtg cagctcgatc tcccgccgca catcggcggg
     2221 gacgtcggcg cgacgcgggc caaaccggaa ccgcttcatc ggcgttctag ggcctggccg
     2281 cgttgagcgc ggcctgcatg atccggctgt aggagcgcca acgctcggtg tcggccttga
     2341 gctgcttgcg accctcccgg gtgagccggt agaacttggc ttcccgattg gagtcggtga
     2401 tgccccactc ctcttccagg tagcctcggc gttccagccg gtgtaacgcc ggatagagcg
     2461 ccccttcctg caccggcatg acttcctcgg tccactgccg gatccagcgg ccgatggcat
     2521 agccatgcag ggggccccag ctcagggcct tgaagatgag aaggtcgagg gaaccggtga
     2581 agagatcact gcccgccacg ggagctccga agcaacccac gctctcaatc tggggtcgta
     2641 tacctaagtc agcaaggggt gggccactat agaaagcagg gagcagggag cagggaggag
     2701 ggagcaggga gcagggagcg gggagcgggg agcgggctca gccttcttgc ctcctgctcc
     2761 ctgctcccgg cttcctgctc cctgttccct gctccctgag caacgcgacc gcgtgccgcc
     2821 gcgcggtttc ggcgtccggg tcgcccagca tccgggccag ttcggtcacc cggtcttcgc
     2881 cgtggatcac accgacgtcg ctggtggcga ggccgccctt ggttcgcttg gccaccacca
     2941 ggtgccggtc ggcggccgcg gcgatttggg gcaggtgggt gatcaccagc acctggtggc
     3001 gctcggccac ctcggccagg gtctcaccca cccggcctcc gacttcgccg ccgacgccgg
     3061 cgtcgatctc atcgaagacc agggtcggca ccgcgtcgtg ccgtcccagc gcggtcttga
     3121 tcgccagcat caggcgggag agctcgccgc ccgaggcgct gcgggccagc agccgcggct
     3181 ccatgccctg gttgagccgg atcaggaact gcaccgtctc cgctcccgcg ctgccggcct
     3241 gctccagggc cgcgagatcc acgcccaagc gcccaccggg caggcccagc cggggcaaca
     3301 ggcgattgac ggcgcgagcc aggcgctcgg ccgcggcacg gcgtttctcg gagaggattc
     3361 cggccagccg ctcgagctcc gccgcaccac tctttcgccg atccgcgatc agcttcagat
     3421 ccagatcggc ggtgtcgagc agatccagtt catcgcccgc ctgccgccgg gtctcgagaa
     3481 tggcgctgat ggtctcgccg tgcttctgct tcaaccgata gatcacgtcc cggcgccgct
     3541 ccagctccgc caaccgggcc ggatcctcgg ccagctcctc ggcgtaatcc gatgccagct
     3601 tgccaagctc ctgtacgttg gcgaaggccg cgtccagcag ctcccgccag gccgcggcgc
     3661 ccgggtcggt ccgctccagc gccgacaacg cgcggtcggc ctgggccagc gcgctcaggg
     3721 cggagccatc ctcgccatcc accgcgtcgg cgatccgccg ggccagatcg gtgagggtgc
     3781 cggcctggga cagccgccgg gcctccaggt cgagcgattc gtcttcaccc ggtctgagcc
     3841 gggcggcgtc gatctcctgg acgacgtgac ggaggtaatc ggcccggcgt cgcacctcgt
     3901 cccgccgggc cgagagagtg gcttcctcct tcgcaagctg ctgaaccgct tcccaggcgt
     3961 tcgccaccgc ccgggcttcc ggctccgcgt caccgaatgc atccagcacg tcgcgctgcc
     4021 gctcggcctg gagcagggtc tgggtttcgt actggccgtg gagatccacc agccagcggc
     4081 ccaactggct caacccgccg gcagtagccg ggctgccgtt cacccacgcg cgcgaccggc
     4141 cctcgctcat cacctcgcgg cggatgatga gccggtcatc gccggcttcg agcccgaggg
     4201 catcgagctc gcgccggagc ggcggtgtga gcggctcgaa cgcgccttcg accagggtgc
     4261 gggccgcacc gggacgcacc gctccggcgt cggcccgggc gccgagcagc agagccagcg
     4321 cgtcgaccag catcgatttc cccgccccgg tctcaccggt
//
LOCUS       DASWKS010000533         2761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2886263, whole genome shotgun sequence.
ACCESSION   DASWKS010000533 DASWKS010000000
VERSION     DASWKS010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2886263"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..2029
                     /locus_tag="VGA78_15275"
     CDS             284..2029
                     /locus_tag="VGA78_15275"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HEX9895289.1"
                     /translation="MACTVTITSVLGTIPPGGTVPTGIQVSGTASGCSSGTIKVTVDC
                     GGAQMSMTVPVTATGDWTATFTSAGQCQCGKPILVVATCTSDPSCTDRLDTTLRCVVV
                     QPQPCNSVGDLTVTVDGCAGASGAGATASFTFTITPPLAGCTYEWSFGDGSPLVTTTV
                     PTVTHVYVAAGSYSASVVATCPSPSGATCFVKDAVTVTIPPCGGCPTVTGLTATVSGC
                     AGPGVATVTFNGTLVPPLVGCSFLWAFGDGGMAVTTTPSASHVYTVPGPYAVAVTAIC
                     PGITPCATTTIAVDVPRCCPVVTNILANLEDNECANGMGTSATVNFSAITDPTPAAGN
                     YTWSFGDGSPPVTNPGPNASHDYASPSAYNVQVVYAPDPAVYPGCATSAFSISGVTVP
                     ACPADEDEDEDEDDGGGGGWGCFGLRVIMTIAAILAIVAVSLAACIPAAATPLFWLAA
                     ALGLVAAIAGILWGIFCPKPCAWALLLAWQVALGVGFILLCFTVCCPIFWAIGLGLVA
                     VGVTLMFIWKERCNKSNCAVLKELVIALSGVVLPLLGWLGVIPALAACINPIVTGALS
                     TLAAVIAVAATNCGS"
     gene            2163..2621
                     /locus_tag="VGA78_15280"
     CDS             2163..2621
                     /locus_tag="VGA78_15280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895290.1"
                     /translation="MAVSSGTPLILVATLSLVISCGTSSSGDNLLTSQPQWEWHSACC
                     GFAGDTKNPSTEGYIYVLQFHPNGRVRATRDDDLVIETGYRVTRSPGGPTADPAVTVV
                     YDSPLPLDPGIEPATAHLVVLLETGTLLLQNLSPCADCYREWRFLPRLAQ"
BASE COUNT          422 a          933 c          865 g          541 t
ORIGIN      
        1 ggggtacggg tgcgcgattt tcccatcacc ctcgacaagg tgctgcctgg tttgccgccc
       61 gtggaagtct gaaccgcaag gctgccactg gtggcaaggg aacgcccacc agtggttggt
      121 agctactcgc cgttcccctg atggtgcagt attgtccgag gaagcccgcc cgacacttga
      181 ggacggacaa ttcccggatt gtcctgcgag ggtaacttct atcgcagtcc actgatcctc
      241 ctacccagat tctgcgctcc cagcacgggg cgtggagggc cgtatggctt gcaccgtcac
      301 gatcacctcg gttctaggaa ccatcccccc aggcggcacg gttcctaccg gaatccaggt
      361 cagcggaacc gcgtcaggct gctcctccgg aacgatcaag gtcacggtcg attgtggcgg
      421 cgcgcagatg tccatgacgg tgcccgtcac cgctacggga gactggaccg ccactttcac
      481 cagcgccggc cagtgccagt gtgggaagcc gattctggtc gtcgccacct gcaccagcga
      541 ccccagttgt acggaccggt tggacaccac cctccgctgc gtggtggtcc aaccacaacc
      601 ctgcaactcg gtcggcgacc tcacggtcac cgtcgatggc tgtgccggcg cgtccggcgc
      661 cggtgcaacc gcgagcttca cgttcacgat tacgccgccc ctcgccggct gcacctacga
      721 gtggagcttc ggggacgggt cgccgcttgt tacgaccacg gttccgacgg tgacgcatgt
      781 ctatgtcgcc gcaggctcct acagcgccag tgtcgtcgcg acctgtccgt ccccgagcgg
      841 cgctacctgc ttcgtcaagg atgccgtaac cgtcacaatc ccgccctgtg gtgggtgccc
      901 gacggtgacg ggactcaccg cgacggtgag cggctgcgcc ggtcccggcg tggcgaccgt
      961 cacgttcaat ggcacgctgg tccctcctct cgttgggtgc tcgttcctat gggccttcgg
     1021 agacggcggc atggcggtca ccacgacgcc gtcggcatcg cacgtctaca cggtgcccgg
     1081 gccctatgcg gtcgccgtga cggcgatttg tcccggcatc accccgtgcg ccacgacaac
     1141 gatcgcggtg gacgttcccc gctgctgtcc ggtcgtcacc aacatcctgg cgaacctgga
     1201 ggacaacgag tgcgccaacg gaatgggaac ctcggccacg gtgaatttca gcgcgatcac
     1261 cgatcccaca ccggcggcgg ggaactacac ctggagcttc ggcgacggct caccgccggt
     1321 caccaacccg ggacccaacg cctcgcatga ctacgcctcc cccagcgcct acaacgtgca
     1381 ggtggtctac gcgccggatc cggcggtgta tccgggctgc gctacgtcgg ccttttccat
     1441 ctcgggagtg accgttccgg cctgtccggc agatgaagac gaagacgagg acgaagacga
     1501 cggtggaggg ggaggctggg gctgtttcgg gctgcgggtc atcatgacga tcgccgccat
     1561 tctcgcgatc gtggccgttt ccctcgctgc ctgtattccg gcggcggcga ctccgctgtt
     1621 ttggctggcg gcagccttgg ggctcgtcgc agccatcgcc gggatcctct ggggcatttt
     1681 ctgcccgaag ccgtgtgcct gggctttgtt gctggcctgg caggttgccc tcggcgtcgg
     1741 gttcatcctc ctgtgcttca cggtctgctg tccgatcttc tgggcgatcg ggctggggct
     1801 ggttgcagtg ggcgtcacgc tcatgttcat ctggaaagag cggtgcaaca agagcaactg
     1861 tgccgtgctg aaggagctgg tgatcgccct gtccggcgtg gtgctgccgt tgctcggctg
     1921 gctcggcgtg attccggcgc tggcggcctg catcaacccg atcgtgacgg gtgccttgtc
     1981 gacgctcgcg gccgtcatcg ctgtagccgc gacgaactgc ggatcgtagc gtcagtcggt
     2041 gttgtcgaac ccgatctttt gttgacccac tgttggcgaa tggtgacggg agggaggatc
     2101 acagggtaat acttcatagg atgcggttgg tgcctctgtc gaattacccc tggtgagctg
     2161 ccatggcggt ctcgtccggt acgcctctga tcctggtcgc cacgctgtcc ctcgtgattt
     2221 cgtgcggcac gtccagctcg ggcgacaacc tcctcaccag ccagccccaa tgggagtggc
     2281 actcggcttg ttgcggcttc gccggcgaca cgaagaaccc gagcaccgag ggctacatct
     2341 atgtgcttca gttccatccc aacggtcggg ttcgtgccac ccgggacgat gacctggtca
     2401 tcgaaaccgg ctaccgggtg acccgatcac ccggcggacc gaccgccgac ccggcggtga
     2461 cggtcgtcta cgactcaccc ctcccgctcg acccgggaat cgagccggcc acggctcacc
     2521 tcgtagtact gctcgagacc ggtaccctcc tgctccaaaa cctctccccc tgcgcggact
     2581 gctaccgcga atggaggttt ctccccagat tggcccagta gttcgggcgt aggagcccac
     2641 gctgagcgcg ctcttcgtgc tcgacggtga tttcagatga cacttgcctc tcgccggatc
     2701 acgctttcgc cttcacctcc tcggctccct cacggcgacc gagcagcggt accagcccgg
     2761 c
//
LOCUS       DASWKS010000534         3674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1394016, whole genome shotgun sequence.
ACCESSION   DASWKS010000534 DASWKS010000000
VERSION     DASWKS010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394016"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..1850)
                     /gene="thiC"
                     /locus_tag="VGA78_15285"
     CDS             complement(117..1850)
                     /gene="thiC"
                     /locus_tag="VGA78_15285"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF006763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX9895291.1"
                     /translation="MTDTIRPLVPSPVRAPDYGDAFPNSKKIHVQGRHGVQVPMREIA
                     LSGGAPPLRVYDTSGVRGLDPRQGLPPLRRAWVTERAVERVECPRDRTAQRPIYRGLG
                     PVTQLHYARRGEITPEMEFVALREGMEPDFIRSELARGRAIIPASINHPELEPMIIGR
                     AFHVKINANIGNSIVTSSIDEEVEKLRWATLWGADTVMDLSTGKDIHETREWILRNSP
                     VPIGTVPIYQALEKVGGVAEELTWEIYRDTIIEQCEQGVDYFTVHAGVLLEYIPLTAD
                     RVTGIVSRGGSIIAKWCLAHHQQSFLYTHFRELCEIMQAYDVSYSLGDGLRPGSIADA
                     NDAAQFAELKTQGELTRMAWEYDVQVMNEGPGHIPMHLIKENMEKQLAWCDEAPFYTL
                     GPLTTDIAPGYDHITSAIGAAMIGWFGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIA
                     AHAADLAKGHPRARAWDDAISTARFEFRWHDQFNLALDPVTARAFHDETLPAEGAKLA
                     HFCSMCGPKFCSMKITQDLREQARGMEQKSREFRERGGELYVQKQEAGSREQEAGGRE
                     QEAGSRKQGAG"
     regulatory      complement(1886..1983)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2149..3147
                     /locus_tag="VGA78_15290"
     CDS             2149..3147
                     /locus_tag="VGA78_15290"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX9895292.1"
                     /translation="MTRRAQNTFLLILAACRPAEPPSDAAAPPAWEDPASHAERFVTA
                     IGVRLHVLDWGGTGPALVLIHGYGDSPHIFDDFVPALGGRFRVVAYARRGHGKSSGAD
                     DFSNAALAADLIAVMDSLGIARASLAGWSMGGNEITAAAGMYPDRVERIVYLDAGYDW
                     SDPALAASMAELPISLDPPPEARASLEAYKAWWVPTWIPDADAGPLEAHLRDVANPGP
                     DGTLRPVPDSANSARAFAALLSERRDYRRVRAPALAIYSEIFLSQPGKDSAATAAIRA
                     WEAKHMVPFRTASQARLRKELKDLEIITVPGSHASFMLVSRDTVAKTIRRFLGAVE"
     gene            complement(3261..>3674)
                     /locus_tag="VGA78_15295"
     CDS             complement(3261..>3674)
                     /locus_tag="VGA78_15295"
                     /inference="COORDINATES: protein motif:HMM:NF014019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HEX9895293.1"
                     /translation="RRKPSWVFAARSRLAGMPDKQPTVSPTHIRHEMTTTAFTLDGYH
                     VVQALGVVKGITVRSRSVFGTIGGALQTLRGGNIELFTELCNKTRAEAFELMLQHAEQ
                     HGGNAVVGIRYDATEIMQGVTEVLCYGTAVVVEPT"
BASE COUNT          588 a         1219 c         1200 g          667 t
ORIGIN      
        1 ccgagctcct gctcgaccgc ggacagttcc tcccggaaca cccggatccg gtccacccgc
       61 cgctgcgggg aggtcccggc atcggacggc cgctcaaccc tcacgcgacg atgctttcat
      121 cctgctccct gcttcctgct ccctgcttcc tgctccctgc ctcctgcttc ctgctccctg
      181 ctccctgctt cctgtttttg gacgtacagc tccccgcccc gctcccggaa ctcgcgggac
      241 ttctgctcca tgccgcgagc ctgttcccgg aggtcctggg tgatcttcat ggagcagaac
      301 ttgggaccgc acatcgagca gaagtgggcc agcttggccc cttcggccgg gagggtctca
      361 tcgtgaaagg cgcgggccgt gaccggatcg agcgccaggt tgaactgatc gtgccagcgg
      421 aactcgaacc gggcggtgct gatggcgtcg tcccaggccc gggcccgggg atgacccttg
      481 gccaggtcgg cggcatgggc cgcgatcttg tacgcgatca cacccgcctt cacgtcgtcg
      541 cggttgggga gtcccaggtg ttccttgggg gtgacatagc acaacagggc ggtgccgaac
      601 cagccgatca tggcggcccc gatggcgctg gtgatgtggt cgtatccggg cgcgatgtcg
      661 gtggtgagcg gccccagcgt gtaaaacggc gcttcatcgc accacgccag ctgtttctcc
      721 atgttctcct tgatgagatg catggggatg tgtcccgggc cctcgttcat cacctgcacg
      781 tcgtactccc acgccatccg ggtcagctcg ccctgggtct tgagctcggc gaattgggcc
      841 gcatcgttgg cgtcggcgat ggaaccgggc cgcagcccgt cacccaggga gtacgagacg
      901 tcataggcct gcatgatctc gcacaattcg cggaaatggg tgtagaggaa gctctgctgg
      961 tgatgggcca gacaccactt ggcgatgatc gacccgcccc gtgacacgat gccggtgacc
     1021 cggtcggcgg tgagcgggat gtactccagc agcaccccgg cgtggaccgt gaaatagtcg
     1081 acgccctgtt cgcactgctc gatgatggtg tcgcgataga tctcccaggt cagctcttcc
     1141 gccacgccgc cgaccttctc cagggcctga tagatcggga ccgtgccgat cggaaccggc
     1201 gagttgcgga ggatccactc ccgggtttcg tgaatgtcct tgccggtcga gagatccatc
     1261 acggtgtccg cgccccagag ggtggcccag cggagcttct ccacttcttc gtcgatcgag
     1321 ctggtgacga tggagttgcc gatgttggcg ttgatcttca catggaaggc ccgtccgatg
     1381 atcatcggct ccagctcggg atggttgatg ctggccggga tgatcgcccg gccccgggcg
     1441 agttcgctcc ggatgaaatc cggttccatc ccttcgcgca acgcgacgaa ctccatttcg
     1501 ggtgtgatct cgccccggcg ggcgtagtgc agctgggtga ccgggccaag gccccgatag
     1561 atcggtcgtt gggccgtccg atcgcgggga cattccaccc gttccacggc gcgctccgtc
     1621 acccaggccc gtcgcaacgg cggcaggccc tgccggggat cgagacctcg cactccgctg
     1681 gtatcgtaga cccggagcgg tggggcgccg cccgacagcg cgatttcccg catcgggact
     1741 tgcacgccgt gacggccttg gacgtgaatt tttttcgaat tgggaaaggc gtccccgtag
     1801 tccggtgcac gcaccggaga aggcaccagc gggcgaatcg tatcggtcat gacaacaggc
     1861 ctcctccgga gggcgccggg gaggaggcct gagtgcgccg cgctcccttc gccggtatca
     1921 accggatcag gttccaaggg actctctcaa tcccgcggac gcgggatacc cctggcggac
     1981 gggtcaaggc tacctgatgt tgttccgacg gtcaacctga gatcgcgcct gccgacggcg
     2041 ccggtgatgg tccagtgggc cggacgagat cctggggcgg ttcgaaccag ataacgagtc
     2101 tgccccgatg agcaccctca caccacatat ccgatcgcga gtggagtcat gaccagacga
     2161 gctcaaaaca cgttcctgct gatcttggcg gcctgtcgcc ccgccgaacc gccgtccgac
     2221 gcggccgccc cgccggcgtg ggaggatccc gcatcccacg ccgaacggtt cgtaacggca
     2281 atcggcgttc gtctccatgt gctcgattgg ggtggaaccg gcccggcgct ggtgctgatc
     2341 cacggctacg gcgactcccc ccacatcttc gatgacttcg ttccggcgct tggcggccgg
     2401 ttccgggtcg tggcctacgc ccgccggggc cacgggaagt catccggtgc cgacgacttc
     2461 agcaacgctg ctctcgcggc ggatctgatc gccgtcatgg acagtctggg gatcgcccga
     2521 gccagcctgg ccggctggtc gatgggcgga aacgagatca ccgccgcggc cggtatgtac
     2581 cccgaccggg tggagcggat cgtgtacctg gacgcgggat acgactggag cgatccagcc
     2641 ctggccgcga gcatggccga actgccgatt tcgctcgatc cgccgccgga ggcgcgggcc
     2701 agtcttgagg catacaaggc gtggtgggtt ccgacctgga taccggatgc cgacgcgggt
     2761 cctctcgaag cgcacctgcg cgacgtcgcc aacccgggcc cggacggcac gctgcgtccg
     2821 gtccccgaca gcgccaactc cgctcgcgcg tttgcagcgc tcctctccga gcgtcgggac
     2881 taccgtcggg tccgggcccc ggctctggcg atctactcgg agatctttct ctcccagccc
     2941 ggcaaggaca gcgcggcgac agcggccatc cgggcctggg aagcgaagca catggttccg
     3001 tttcgcacgg cgtcacaggc gcggctgagg aaggagctca aggacctgga gatcatcacg
     3061 gtgccgggat cacatgccag cttcatgctg gtttcccggg acacagtggc gaagaccatc
     3121 aggaggttcc tgggagcggt agagtagtgc acaccggttt tcctggcagc tcccagccgg
     3181 cggcgcgcct agaaccggtg gctcagcgcg gtgccgagca cccagtcgac ttcaccaggc
     3241 gggagaggaa ttcggcctgc tcaggtgggc tccacgacga ccgccgtccc gtaacagagg
     3301 acttcggtga ccccctgcat gatctcggtg gcatcgtagc ggatcccgac gaccgcattg
     3361 ccgccatgct gttcggcgtg ctgcagcatg agctcaaacg cttccgcccg ggtcttgttg
     3421 cagagctcgg taaacagctc gatgttcccc ccgcgaaggg tttggagtgc gccaccgatg
     3481 gtcccgaaca ccgaccggga gcgcactgtg attcccttga ccacgcccaa ggcctggacc
     3541 acgtgatacc cgtcgagggt gaaggcagtg gtggtcatct cgtggcgaat gtgggtcggc
     3601 gaaacagtcg gctgtttgtc aggcatgccc gccaatctac tccgagcggc gaagacccac
     3661 gacggctttc gacg
//
LOCUS       DASWKS010000535         7572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2160023, whole genome shotgun sequence.
ACCESSION   DASWKS010000535 DASWKS010000000
VERSION     DASWKS010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7572
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2160023"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1690
                     /locus_tag="VGA78_15300"
     CDS             <1..1690
                     /locus_tag="VGA78_15300"
                     /inference="COORDINATES: protein motif:HMM:NF018880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895294.1"
                     /translation="LASAPTPALGKERRSYWGFAFDKLPRNGRVWYPDGNGPFPLVLV
                     VHGNHNMKDFSDPGYEYLGRHLASRGYIVVSVDQNFLNGNIRAENDARGWMLLQHLVL
                     WRGWNDSTAGPFSRKVAMDRIALIGHSRGGEAVAVAGAFNRLKHYPDDANVTFDFNFG
                     IRSLIAIAPIDGQYEPTSRPTPLVNLNYLVIHGSHDGDVSAFSGLRQYQRVKFTDGRP
                     WFKAAIWMYRANHGQWNTVWGNGDNGRQSARWLDLDQLIPPAAQRRMALVYFTSFLEA
                     TLRDRHEYLPLFRDHRLIGGWLPKTLYATRFQESGFRTLADFTEDVDLTTGSVPGVRL
                     EGDSLSTWRENVIPLRWRNANVGHQGVWLGWNNRIAADDTTRRGRPASYSISVPDSLR
                     TAWRVNGQTTLVLSLAATDQTPGPRSAAKDSTRSDSTKADSAKAKPKPRKPAPKPTAK
                     DSLPIELTVEVVDAGGHTARIPLDRYGPLRRPTQVTVYRRKGRDKRNFAALYELVLQT
                     YTIPLADLVATEPRFDPARLAAVRLVFDRTIAGTVVLSDLGLSTPDPAFFAARF"
     gene            1706..2590
                     /locus_tag="VGA78_15305"
     CDS             1706..2590
                     /locus_tag="VGA78_15305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895295.1"
                     /translation="MRMLIVLALAAAVPASLVAQETAPLVLRLPASARAAALGNGFAG
                     GRGSEMIFYHPAQIGLVTGLSLSLARYRASATFASLATSSTVGVLVVAAGVQWLDYGS
                     EPGVFPTSPRSLTTSGSEISQSLAASAAAAIRLIGFRWGIAAKYVEERLPDARPSGAA
                     FDVGVGRDFSRISVGLVAQNLGADIGREPARADLPTRLVLGAATPRYPIHTWFDIAAT
                     AAVNWERHSGVSPAAGAELTYVPLEGFALALRAGARRVTGGPSSQQPVTFGAGFSFDR
                     LSLDYAYDGAHWFGVRMQ"
     gene            complement(2748..5315)
                     /locus_tag="VGA78_15310"
     CDS             complement(2748..5315)
                     /locus_tag="VGA78_15310"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX9895296.1"
                     /translation="MHPARDHHLPPDPAAFRAARHPRGRVIVIAPTRAACETIELALG
                     THITTLLERQHGHVIRDWAGRGIGFGIVAGTGTGKTLGIRSIAESILREPLSYGVVNR
                     EREATPETPSWNVVVVTTGIARHWFQSDLITPADTLIVDEIHQTSAELELCLALGKRV
                     GCRFIWLSATVDPSVYARYLRSAEVLETSAYDPALRAKVEVLRHDVAGFLDERRVRHL
                     IRERRGVAVFVPTRAEVEKLSAELGARWPKLSSAFYHGGEPIRVIRPFLEGGVEKPFL
                     LAMTAAGQSALNLPGLDTVVIYDARYGNVVDRGRNVLHRLYLGANEILQMAGRVHGRV
                     KNGEVFILSDRELDFGSLKPGPPEFQLAGDAERVALTCAALGVDAADLDLPVPLDQVA
                     YRRAVKLLTERGLIENGRQTKYGREVDALPVERSWGELLVHADDELTPIVAVCAGIES
                     LHRMTREERDLHGVTASGSDHLTAYNLFAEAVNRYGTIGEVHGLARHLFDDGVDEWAE
                     RRGVLLKAIEDASLGLASVFRALELPLSVTLPYATKELRRRWGELLARIMPFDLVIDE
                     HTADGREARVGKTSVAGSWGAVAGSLRYFADRFGVARASIEGTTLSYELIREHAVWSR
                     PEVWMVGEGKRQALAVARRLRYFGFELDADVQTLTGPIPEDLRGPARDALAAALLEGE
                     ARHPAQGAVSRAVGQLREWWRRSGGTVPAASDDAIRADLRQQLEEVESWNDFGRTPLG
                     LDPAARIPPETRAELDRLPGMIRLLGDAVPLEYLVDRGTAMVRLRLREGQARRIRSQD
                     LPPMDRPLRFVVPRGDEADLEAGTIEELQEKLAAGHRTERRQGRRTTARPRRGGRRR"
     gene            5436..5780
                     /locus_tag="VGA78_15315"
     CDS             5436..5780
                     /locus_tag="VGA78_15315"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9895297.1"
                     /translation="MAPDRAELLQGTLELLLLQILSVAPEHGWGITQRLEQVSGGALL
                     VNQGSLYPALERLERKGWIRNEWQTTENNRRARYYLLTPRGRRCLAVERAIWERSSRA
                     VNSILAWAGETA"
     gene            5777..>7572
                     /locus_tag="VGA78_15320"
     CDS             5777..>7572
                     /locus_tag="VGA78_15320"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895298.1"
                     /translation="MSLLSDLRHRLRGLFFRSRVEGERAEEFRFHLEQAAEKYRRQGM
                     SATEARRRAALAFGNVPATMEAVRDQRGTRWLEDVAHDLRYAVRQLARTPGFTAVAVI
                     TLALGIGANTAIFSVVDGVLLRPVVLSDADRLVVVWETDRASSTTREPASWPDFVDFR
                     RETRTLTAAAAVSGADVSLLPDRGEPVRISGAAVTANYFSLVGIAPLLGRVPSEAEDQ
                     PNGPRVTLLGERIWRHRFNADPAVLGQTVRLNDRPYLIVGVLPQGTDFGLDQIHARAA
                     YHPPYSGEGEVDVWVTLQAGEQSYPRSTHPIFVLGRLAPEATVSAVGAELAEISGRLE
                     QSYPENANRGVNVESLRDVAFGSVQPVLILLLSAVFLVLLVACVNVANLLLARGTRRA
                     REIAMRAALGAGLGRLGRQFVTETLLLTVVGAGAGIGVALLGLRALLVLVPAEVPRVA
                     EVGIDLRVLLVTLGVSVGVGLAFGLVPTLQAFRLDVMSHVKGEGLSGTSGLKRHRLRN
                     ALVVTELALSVVLVLSAGLLIRSFGSVMQVDPGFQAAGILKAEYQLPTTRYPRDFSRF
                     PNWTEMQGFARTVLERAAAIPGVTSAAIASDHP"
BASE COUNT         1161 a         2659 c         2520 g         1232 t
ORIGIN      
        1 actcgcctca gccccgaccc cggcgctggg caaggagcgg cgtagctact gggggttcgc
       61 cttcgataag ctcccccgca acgggcgcgt ctggtatccc gacgggaacg gaccgttccc
      121 gctggtactg gtggtgcacg gcaatcacaa catgaaggat ttctccgacc cgggctatga
      181 gtatctcggg cgccacctgg ccagccgcgg ctatatcgtc gtgtcggtgg accagaactt
      241 cttgaacggg aacatccgcg ccgagaacga tgcccggggc tggatgctgc tgcagcacct
      301 ggtgctgtgg cgaggctgga acgactccac cgcaggaccg ttctcccgca aggtggcgat
      361 ggaccggatc gccctgattg gtcactcccg cggtggcgag gccgtcgcgg tcgccggtgc
      421 tttcaaccgg ctcaagcact accccgacga cgccaatgtg acattcgact tcaacttcgg
      481 gatccggtcg ctgatcgcga tcgcgccgat cgatgggcag tacgagccca ccagccggcc
      541 gaccccgctg gtgaacctga actacctggt cattcacggc tcacacgacg gcgacgtgtc
      601 ggcgttctcg ggactcaggc agtatcagcg cgtcaagttc accgacggtc gcccctggtt
      661 caaggcggcg atctggatgt accgggccaa ccacggccag tggaacacgg tctggggcaa
      721 cggcgacaat ggtcgccaga gcgcgcgctg gctcgacctc gaccagctca tcccgccggc
      781 ggcacagcgg cggatggcgc tggtgtactt caccagcttc ctggaagcga ctctgcgcga
      841 tcggcacgaa tacctccccc tgttccggga tcatcggctg atcggcgggt ggctgcccaa
      901 gacgctgtac gcgacccggt ttcaggagag cggcttccgg acgctggccg actttaccga
      961 ggatgtcgac ctcacgaccg gcagtgtacc cggggtgcgg ctggaaggcg acagcctttc
     1021 cacctggagg gagaacgtga tcccgctccg ctggcgcaac gccaacgtcg gccatcaggg
     1081 cgtgtggctg gggtggaaca accggatcgc ggcggacgac accaccaggc ggggccgccc
     1141 ggcctcgtac tcgatctcgg ttcccgattc gctccggacc gcctggcggg tgaacggtca
     1201 gaccacgctg gtcctgtctc tcgccgcgac cgatcagacc cccggccctc ggagcgcggc
     1261 caaggacagt actaggtcgg acagcaccaa ggcagatagc gcgaaggcga agcccaagcc
     1321 caggaagccg gcgccgaaac ccaccgccaa ggattcgctc ccgatcgagc tgacggtgga
     1381 agtggtggac gcgggcggac acaccgcccg gataccgctc gaccgctacg gaccgctccg
     1441 gcggccgacc caagtcacgg tctatcgtcg gaaaggccgc gacaagcgaa acttcgccgc
     1501 gctctatgag ctggtgctcc agacctacac cattccgctc gccgacctgg tggcgaccga
     1561 gccgcgattc gatccggccc ggctcgccgc cgtccgtctg gtcttcgatc ggaccatcgc
     1621 gggaacggtg gtcctgtccg acctggggct ctcgaccccc gatcccgcct tcttcgcggc
     1681 ccgcttctag agcccggagc ccgccatgcg gatgctgatc gttcttgcgc tggccgccgc
     1741 tgtgcccgcg tctctcgtag cccaggagac cgccccgctc gtcctccggc ttccggcgag
     1801 cgcccgggcg gccgcgctgg gaaacggttt tgccggtggc cgaggcagcg agatgatctt
     1861 ctaccatccg gcccagatcg gactcgtcac cgggctctcg ctctcgctgg cgaggtaccg
     1921 cgcatccgcc acgtttgcct cgctggcgac ctcgtccacg gtcggggtct tggtggtggc
     1981 cgcgggagtg cagtggctgg actatggcag cgagcccggc gtcttcccga cttccccaag
     2041 gtccctcacg acgtccggct cggagatctc ccagagtctg gcggccagcg ccgcggcggc
     2101 catccggctg atcgggttcc gatggggcat cgcggcgaag tacgttgagg agcggctccc
     2161 cgatgcgcgg ccgagcggcg cggcattcga tgtcggcgtg ggtcgcgact tttcccgcat
     2221 atcggtgggt ctggtagcgc agaatctcgg cgcagacatc ggacgggaac cggcgcgtgc
     2281 cgatctcccg acgcgactgg tcctgggggc ggccacgccc cgctacccga tccatacctg
     2341 gttcgacatc gccgctaccg cggcggtgaa ctgggagcgg cacagtgggg tgtccccggc
     2401 cgcgggagcg gagctgacct acgtcccgct ggagggcttc gcgctggcgc tccgcgcggg
     2461 agcgcggcgg gtgaccggcg gtcctagcag tcagcagccg gtcaccttcg gagccgggtt
     2521 ctccttcgac cggctctcgc tggactatgc ctacgacggg gcgcactggt ttggggtgag
     2581 gatgcagtag acaacgttcc gggttccacg ttccaggttc cgggtgcggt gctgggtgcg
     2641 gtgccaaggt gccgggtgcc tagtgcatca gcgcaccgag cacagggcac ttggcaccgc
     2701 actccgcacc gcacgcggaa cctagaaccc ggaacctgga acatgaatca ccgcctcctc
     2761 ccccctcgcc tcggccgggc cgtcgtcctc cgcccctgcc tgcgctcggt ccgatggccc
     2821 gcggccagct tttcctggag ctcttcgatc gttccagcct cgaggtcggc ctcgtccccc
     2881 cggggaacca cgaaccggag cggccgatcc atcggtggca agtcctgact tcggatccgg
     2941 cgagcctgcc cttcccgaag ccgaagccga accatcgccg taccccggtc taccaggtac
     3001 tccaaaggca ccgcatcacc taacagtcgg atcattcccg gcaggcgatc cagctcggcc
     3061 cgagtctccg gtggaatcct ggccgccgga tccagcccca gcggagtgcg cccgaaatca
     3121 ttccaggact cgacctcctc cagctgctgc cgcaggtcgg cccggatcgc atcgtcggat
     3181 gcagccggga ccgttccgcc cgagcgccgc caccattcgc gcagttgtcc caccgcccgc
     3241 gagacggcgc cctgggccgg atgtcgggcc tcgccttcca gcagggccgc cgcgagggcg
     3301 tcgcgggccg gcccgcgcaa gtcttcggga atgggtccgg tgagcgtctg cacgtcggca
     3361 tccagctcaa agccgaagta tcgaagccgg cgcgccaccg cgagcgcctg tcgtttcccc
     3421 tctcccacca tccacacttc cgggcgagac cagaccgcat gctcgcggat cagctcgtaa
     3481 ctcagggtag tgccttcgat cgaggcccgg gccacgccga accggtcggc gaagtagcgg
     3541 agtgatcccg ccaccgcgcc ccaacttccc gccaccgacg tcttgcctac ccgcgcctct
     3601 cgcccatccg ccgtgtgctc gtcgatgacc aggtcgaacg gcatgatccg cgcgagcagt
     3661 tccccccagc ggcggcgcag ctctttcgtg gcgtagggca gcgtcactga caagggcagc
     3721 tccagggccc ggaagaccga cgccaggccg agggatgcgt cttcgatggc cttgagcagc
     3781 acgccccgcc gctcggccca ctcatcgact ccgtcgtcga acaggtgccg cgccaggccg
     3841 tgcacctcgc cgatggtgcc gtaccggttc accgcctcgg cgaacaggtt gtacgccgtc
     3901 aaatggtcgc tgccgctggc cgtgactccg tgcagatcgc gctcctcccg ggtcatgcgg
     3961 tggagcgact cgatcccggc gcagacggcg acgatcgggg tcagctcgtc atcggcgtgg
     4021 accagcagct cgccccagga gcgctcgacc gggagcgcgt ccacctcgcg gccatatttg
     4081 gtctggcggc cgttctcgat caggccccgt tccgtcagca gcttgactgc gcgacggtac
     4141 gccacctggt cgagcggcac cggaagatcg aggtcggccg cgtccactcc cagcgccgcg
     4201 caggtgagcg ccacccgttc ggcgtcgccg gccagctgga attccggcgg ccccggcttg
     4261 agggacccga aatccagctc ccgatcgctc aggatgaaga cctcgccgtt tttgacccgg
     4321 ccgtgcaccc gtcccgccat ctgcaggatt tcattggcac ccaggtacag ccggtggagg
     4381 acgttccgcc cgcggtcgac cacgttgccg tagcgggcat cgtagatgac cacggtatcc
     4441 agcccgggga gattcagcgc gctctgcccc gcggcggtca tcgcgagcag aaagggcttc
     4501 tccaccccac cttcaagaaa cggccggatc acccggatgg gctcgccccc gtggtagaac
     4561 gccgacgaca gcttgggcca gcgcgccccc agctcggccg acagcttctc cacttccgcc
     4621 cgggtcggta cgaagaccgc cacaccgcga cgctcccgga tcaggtgacg gacccgtcgt
     4681 tcgtcgagaa accccgccac gtcatgccgc agcacttcca ccttggctcg aagggccggg
     4741 tcgtaggcgc tggtttccag cacttcggca ctccgcaggt atctcgcata gacggacggg
     4801 tcgaccgtcg cggagagcca gatgaagcgg cagcccaccc gcttcccgag cgcgaggcac
     4861 agctccaact ccgccgaagt ctggtggatc tcgtcgacga tgagcgtgtc cgccggggtg
     4921 atgagatcac tctggaacca gtgacgcgcg atcccggtcg tgaccaccac cacgttccac
     4981 gacggggtct ccggcgtcgc ctcacgctcg cggttcacca ccccgtagga gagcggctcc
     5041 cgcaggatcg actcggcgat ggaccggatg ccgagcgtct tgccggtgcc ggtgccggcc
     5101 acgatgccga acccgatccc gcgccccgcc cagtcgcgga tgacgtggcc gtgctggcgc
     5161 tcgagcaggg tggtgatgtg ggtgccgaga gccagctcga tggtctcgca ggcggcccgg
     5221 gtcggcgcga tcacgatcac ccgaccgcgg ggatgccgcg cggcccggaa ggccgcggga
     5281 tcgggaggaa ggtggtggtc gcgtgcggga tgcacgccta aagctagtgc tgaggacttg
     5341 ggactaagga cgcaggcagc agagtggccc ccgcgccttg acatccgagg ccctgaaacc
     5401 ccaccatact ctcgaccgtc gagaggaaga agcccatggc ccccgaccgc gccgaattgc
     5461 tgcaggggac gctggagttg ctgctgctcc agatcctttc cgtcgccccc gaacacggct
     5521 gggggatcac ccagcggctg gaacaggttt ccggcggcgc gctgctggtg aaccagggat
     5581 cgttgtaccc ggccttggaa cgtctggaac gcaagggctg gattcgcaat gagtggcaga
     5641 ccaccgagaa caaccgccga gcgcggtact acctcctgac gccccggggc cgccgctgtc
     5701 tggcggtgga gcgagcgatc tgggaacggt catcgcgggc ggtcaactcc atcctggcat
     5761 gggccggaga aacagcatga gtctcctatc cgatctgcgg catcgtctgc gggggctgtt
     5821 cttccgctcc cgggtggaag gggaacgggc cgaggagttc cgcttccatt tggagcaggc
     5881 ggcggagaaa taccggcgcc aggggatgtc agccacggag gcacggcggc gcgcggccct
     5941 ggcgttcggg aatgtccccg cgaccatgga agccgtccgc gaccagcgcg gcacccgctg
     6001 gctggaagac gtggcgcacg acctgcgcta cgccgttcga cagctggcgc gcactcccgg
     6061 gttcaccgcg gtggccgtga tcacgctggc gctcgggatc ggggccaata ccgccatctt
     6121 cagcgtggtc gatggcgtgc tgctccggcc cgtcgtcctg agcgatgccg accgcctggt
     6181 ggtggtgtgg gaaaccgacc gcgcatccag caccacccgc gagccggcct cctggcccga
     6241 tttcgtcgac ttccggcgcg agactcgcac cctcacggcc gcggccgcgg tgagtggcgc
     6301 ggatgtgagt ctgctgcccg accggggcga gccggtccgg atttcgggag cggcggtcac
     6361 tgccaactac ttcagtctgg tcggcatcgc cccgctgctg ggacgagtgc cgtccgaggc
     6421 cgaggaccaa cctaacggtc cgcgggtgac tctcctgggc gagcggatct ggcgtcaccg
     6481 cttcaacgcc gaccccgcgg tgctcgggca gacggtccgc ctcaatgatc gtccgtacct
     6541 catcgttggg gttctgccgc aaggcaccga cttcggcctg gatcagatcc acgcccgggc
     6601 cgcctaccat ccgccctact cgggcgaagg cgaggtggac gtctgggtca ccctgcaggc
     6661 cggcgagcag agttaccccc gcagcactca cccgatattc gttctcggcc ggctcgcacc
     6721 ggaagccacg gtctccgccg tgggggccga gctggccgag atctcgggcc gattggaaca
     6781 gagttatccc gagaacgcca accggggggt gaacgtcgag tccctgcgtg acgtcgcgtt
     6841 cggctcggtg caaccggtgc tcattctgtt gttgtccgcg gtgtttctgg tgctgttggt
     6901 agcgtgcgtc aacgtcgcca acctgctgct ggcccggggc acccgccggg cccgcgagat
     6961 cgccatgcgc gccgccctcg gggccggtct ggggcggctg ggccgccagt tcgtgaccga
     7021 gactctcctg ctcaccgtcg tgggcgccgg ggccggcatc ggggtcgccc tgctcgggct
     7081 ccgggcactg ctggttctgg ttccagccga agtgccccgc gtggccgagg tggggatcga
     7141 tctccgggtc ctgttagtca cgctcggggt cagtgtgggc gtcggcctcg ccttcggtct
     7201 ggtccctact ctgcaggcat tccgcctcga cgtgatgagt cacgtcaaag gtgaaggcct
     7261 gtccggcacc agtggactca aacggcaccg gctccgaaac gcgctggtgg tgacggagct
     7321 cgccctgtcg gtggtgctgg tgttgtcggc gggcctcctc atccggagct tcggcagtgt
     7381 gatgcaggtg gatcccgggt tccaggccgc gggcattctc aaggccgaat accagctgcc
     7441 caccacgcgt tacccgcggg acttctcgcg ctttcccaac tggaccgaga tgcagggatt
     7501 cgcccgaacc gtgctcgaac gggcggcagc gattccgggc gtgacctcgg cggcaatcgc
     7561 gtcggaccac cc
//
LOCUS       DASWKS010000536         7507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1037686, whole genome shotgun sequence.
ACCESSION   DASWKS010000536 DASWKS010000000
VERSION     DASWKS010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7507
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1037686"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1245
                     /locus_tag="VGA78_15325"
     CDS             <1..1245
                     /locus_tag="VGA78_15325"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9895299.1"
                     /translation="ALHLQKLIDPGRMELTLVNRDNFFLFTPMLHEVAASDVDVTHIV
                     SPVRKLVRGGTLVTGEVQAIDLARRLVRVAPAGGTHTHELAYDHLVLALGSVTNFFNL
                     PGVEHRAITIKSLSDATVLRSRLIGLLEEADFEASEGHRRPLTVLVAGGGFAGVETMG
                     AVNDFIRESLRFYPHLRAGDLRMVLVHPGDLILPELGPALGSYAGRALARRGVEILTR
                     TSVTAADDRGVHLSDGSTVPTRVFVWAAGTAPNPLLAGLPCAKERGRVVANGSLAVPE
                     YPGVWALGDGACIRDPNGGNPYPPTAQHALRQGKVLAENIAATIEGRPQRTFVFKTLG
                     QLAAIGRRTGVASILGFKFQGFVAWFLWRAIYLSKLPRFERKVRVALDWALDLVVTKD
                     LVQFHAPPAPALSVGEIEPAEA"
     gene            1247..2029
                     /locus_tag="VGA78_15330"
     CDS             1247..2029
                     /locus_tag="VGA78_15330"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HEX9895300.1"
                     /translation="MKPQRRVNWLEYTLEAWALGLFMFSACGFGVLLFHPASPLVTTI
                     PDPLTRRLLMGIAMGLTAMGNFYSPWGRRSGAQMNPAVTLTFFRLGRMAGHDALGYVT
                     AQFAGGVLGTFVAAALFHRWIADPAVAYAVTLPGRWGAGWAFAGELAISFGLMLTVLT
                     ISGWEGRAGFTGLAAGVLVATYITLEAPVSGMSMNPARTLGSAIPAMRWEALWIYFTA
                     PPVGMLLAVEVRSLLGLGHEKHCAKMHHDSRYRCIFCEHRAR"
     gene            complement(2026..3180)
                     /locus_tag="VGA78_15335"
     CDS             complement(2026..3180)
                     /locus_tag="VGA78_15335"
                     /inference="COORDINATES: protein motif:HMM:NF018479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HEX9895301.1"
                     /translation="MTTATLQTVSEADRRATWLELFFDLAFAAAIAEVGSVLSGDYSL
                     RGLLQFGFLFLLIWSAWVGHTLFSSRFDTDDLVQRVLTLAQMFAVAVMAVNAEGPLGG
                     RTSAGFAAAYAALRLVLMAQYLRARFQERARDLVTGHAMVVGAGAVLWLASAFIGAPV
                     RFVLWGLALALDLGAPVVLHARTGGRPHHPAHLPERFGLFTLILLGESLAAMMTGMKH
                     QEYWSTPAAAAAAAGIGVAFAIWWCYFHVLRAASPRPVQSPREAMQQRRWASAHLPLG
                     LGIALTAIGVEQVIAHGGSHPLSREGTWVLSIGGAVVLAALAGLAGNLPGTGPVNARP
                     GWALAGLVLAAGIVGTSLPPVLLLLLLLGSGLLLIALHGPAEGGAARISG"
     gene            3489..4067
                     /locus_tag="VGA78_15340"
     CDS             3489..4067
                     /locus_tag="VGA78_15340"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9895302.1"
                     /translation="MNDDFETLLTPVLKTAYQTARHLTRTQPDAEDLVQEAVLLALKG
                     FEGFERGTNFRAWFLRILINVFYSDYRKSRRRGVSVSLDDEAAPLFLYQQTAAAGMHR
                     TDADPARSFMSRLDAAEISRAIEGLPLDYRTVCTLYFVEDLSYQAIASVLDCPLGTVR
                     SRLHRGRRLLQQTLWSLAEEQGLVRNPQAVAV"
     gene            complement(4086..4520)
                     /locus_tag="VGA78_15345"
     CDS             complement(4086..4520)
                     /locus_tag="VGA78_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX9895303.1"
                     /translation="MRFMILVKADENSEAGVLPDEKLLTEMGQYNEELVKAGVLLAAE
                     GLQPSSKGARVRFSGTKRTVVDGPFAETKELIAGFWLIQVKSKEEAIEWVKRAPNPFP
                     GTESEIEIRQVFEAEDFGPALTPELKEAEKRMGAQMAANARR"
     gene            complement(4637..5509)
                     /locus_tag="VGA78_15350"
     CDS             complement(4637..5509)
                     /locus_tag="VGA78_15350"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9895304.1"
                     /translation="MARRAVVAGLLLAGSPAVLAAQDQLTLPLRENSVRFAVIGDAGT
                     GEREQYEVAHQIWRYYQAFPFTFAIMLGDNVYGPERPQDLLRKFERPYQPLLDAKVEF
                     YAALGNHDDPNQRFYKPFHLDGKRYRSFKKENATFLVLDSNYLDPEQVKWLEDELKAA
                     GGGWKIPYFHHPLYTTARRGPELELREILEPLFLKYGVEVVFSGHEHIYERMKPQKGI
                     HYFTAGGSAKLRRGDTRPNGVTEVGYAADRTFMLVEIVGDTLHFQTVTRTGKTVDQGI
                     IKRRVTGKPAPVAH"
     gene            complement(5516..6109)
                     /locus_tag="VGA78_15355"
     CDS             complement(5516..6109)
                     /locus_tag="VGA78_15355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895305.1"
                     /translation="MWFNAGRGTVIRLLAAAALLGAVAGCTKETSPIDPIADAVAEFT
                     KGVDEYVQLRNHLADSVGPLAETMSQVQIAERAKALAQAVTIARAQAQQGDVFTPRAG
                     AVFATLIKQEYSRRPPRVKETRGDAQEELPDFVPQVNQIYPTTYPLATFPPELLPLLP
                     QLPEVVEYRVVQHYLILRDIEANLILDFMPRAVPVVE"
     gene            complement(6272..7192)
                     /locus_tag="VGA78_15360"
     CDS             complement(6272..7192)
                     /locus_tag="VGA78_15360"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895306.1"
                     /translation="MTHAGAVQSQLQTALAGAYRIERELGRGSMARVFLAHDLRHNRD
                     VAVKLLPPETATPDAAERFLREIRITAALQHPNILSLLDSGAATGLCWYVMPYVEGES
                     IRDRLASGPLPLLEAAKVALQVARGLSYAHAQGVIHRDIKPENIMLSGGQAMITDFGL
                     GRAVRGDAARLTAMGLPLGTPAYMSPELIQGEDADTRSDIYGLGCVFYEMVTGRPPFI
                     GSLAEVLRQHVNATAAPPSRYRPGVPAAVDRASERALAKAPKDRYPKADTFAADLEQI
                     AALATLDDGNPPEREKKGALRRLLDKLIGA"
     gene            complement(7189..>7507)
                     /locus_tag="VGA78_15365"
     CDS             complement(7189..>7507)
                     /locus_tag="VGA78_15365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895307.1"
                     /translation="LQALVEKAKSRRKKIEEDLYGGKPRYDGVLVVRGVAGASEEALR
                     ETISTILDREAKEWMLDQVETDDDRPVLRYQVRTKKSVPGPLLVESVRRACQEIADEV
                     RFE"
BASE COUNT         1251 a         2530 c         2428 g         1298 t
ORIGIN      
        1 gccctccacc tgcagaaact gatcgatccc ggccggatgg agctcaccct ggtgaaccgg
       61 gacaacttct tcctgttcac acccatgctt cacgaggtgg ccgcgagcga cgtcgatgtc
      121 acccacatcg tgagcccggt gcgcaagctg gtccgcggcg gaacgctcgt gaccggcgaa
      181 gtacaggcga tcgacctcgc tcggcggctg gtccgggtgg cgccggccgg gggaacccac
      241 acccatgagc tggcctacga tcatctggtt ctcgcgctgg gaagcgtcac caacttcttc
      301 aatctccccg gggtcgagca tcgggccatc accatcaagt ccctctccga cgccaccgtc
      361 ttgcgcagcc ggctgatcgg gctgctggag gaagctgact tcgaagcgtc cgaaggacac
      421 cgccggccgc tcacggtgct ggtggcgggc ggcggattcg cgggcgtgga gacaatgggg
      481 gcggtgaatg acttcatccg cgaatcgctc cgcttctacc cccatctccg cgccggagac
      541 ctccggatgg tcctggttca ccctggcgat ctcatccttc ccgagcttgg gccagcgctg
      601 gggagctatg ctggccgggc cctggcgcgc cgcggggtgg agattctgac ccgcaccagc
      661 gtgaccgccg ccgacgatcg tggggtgcat ctgagcgacg gcagcaccgt tcccacccgg
      721 gtcttcgtct gggccgccgg caccgcgccg aacccgctgc tggccggttt gccctgcgcc
      781 aaagagcggg gccgggtggt ggcgaacggt tctcttgcgg tgccggagta tcccggggtc
      841 tgggcgctgg gggacggcgc ctgcattcgc gatcccaatg gcggcaaccc gtatccaccc
      901 acggcgcagc acgccttgcg gcagggcaaa gtactggccg agaacatcgc ggcgacaatc
      961 gagggacggc cccaacgcac cttcgtcttc aagacgttag gccagctcgc cgcaatcggg
     1021 cgccgcaccg gcgtcgccag tattctgggg ttcaagttcc agggattcgt ggcgtggttt
     1081 ctctggcggg cgatctatct gagcaagctg ccccgcttcg aacggaaggt ccgggtggca
     1141 ctcgactggg ccctcgatct ggtcgtcacc aaggacctgg tgcagtttca tgccccgccc
     1201 gcgccggcgc tctcggtcgg ggagatcgaa cccgccgagg cctgaggtga agccgcagcg
     1261 acgggtcaac tggctggagt acaccctcga agcctgggcg ttggggctgt tcatgttctc
     1321 ggcatgtggg ttcggggtcc tgctcttcca tccggcatca ccgttggtga ccaccatccc
     1381 cgatccgctc acccgccggc tgcttatggg aatcgcgatg ggactcaccg cgatggggaa
     1441 cttctattcc ccctggggca ggcgctccgg tgcccagatg aaccccgccg tcactctcac
     1501 gtttttccgg ctcggtcgga tggcaggaca tgacgcgctg ggttatgtca ccgcccagtt
     1561 cgcgggcggg gtcttgggga ctttcgtcgc cgccgcgctc tttcatcgct ggatcgccga
     1621 tccggccgtt gcgtacgccg tcaccctccc cggccgatgg ggggccgggt gggctttcgc
     1681 cggcgagctc gccatttcgt tcggcctgat gctcacggtg ctcacgatct cggggtggga
     1741 aggcagggcc ggattcaccg ggctggccgc gggcgtgctg gtcgcgacct atatcaccct
     1801 cgaggccccg gtctccggca tgagcatgaa cccggcccgc acgctcggtt ccgctatccc
     1861 tgccatgcgc tgggaggcgc tttggatcta cttcaccgcc ccgccagtcg gcatgctact
     1921 ggcggtcgaa gtccggagtc tgctcggcct gggccatgag aagcattgcg cgaagatgca
     1981 tcacgattcc cgctatcgct gcatcttctg cgaacaccgg gcacgctaac ccgagatcct
     2041 agcggctcca ccttccgccg ggccgtgcag cgcgatcaag agtagaccac tgcccagaag
     2101 cagaaggagg agaagcaccg ggggaaggct cgtgccgact atccccgcgg cgagcaccag
     2161 acccgccagg gcccagccgg ggcgggcatt gaccggcccg gttccgggga gattgcccgc
     2221 gagtccggcc agcgcggcca gcaccaccgc gccaccgatg gagagaaccc aggtcccctc
     2281 tctcgagagc ggatggctgc ccccatgagc gatgacctgt tccaccccga tggcggtaag
     2341 cgcaatcccc agaccgagcg gtagatgggc cgaagcccag cggcgctgct gcatcgcctc
     2401 ccggggggac tgcaccggcc ggggggacgc ggcgcgaagc acgtggaagt agcaccacca
     2461 gatcgcaaag gcgactccga tgccggccgc cgcggctgcc gcagccgggg tgctccagta
     2521 ctcctgatgc ttcatcccgg tcatcatcgc ggccagggat tcacccagga gaatcagggt
     2581 gaacagcccg aagcgctccg gcaagtgggc cgggtgatgc ggccggcctc cggtccgggc
     2641 gtggagcacg accggcgctc ccaggtcgag ggccagggcc agcccccaga ggacgaatcg
     2701 gaccggagcg ccaataaacg ccgaagccag ccagagaacc gcaccggccc cgaccaccat
     2761 cgcgtggccg gtcacgagat cccgggcccg ctcctggaac cgggcgcgga gatactgggc
     2821 catgagcacc aggcgcagcg cggcgtaagc cgcggcgaat ccggccgagg ttcgaccgcc
     2881 caacggtccc tccgcgttca cggccatgac cgccaccgcg aacatttgcg ccagagtcaa
     2941 gacgcgctgc accaggtcgt cggtatcgaa gcgggaggaa aacagcgtat gtccaaccca
     3001 ggccgaccag atcaggagga agaggaaacc gaactgaagc aggccccgga gcgagtagtc
     3061 cccgctcaga acactcccca cctccgcaat ggccgcggcg aacgcgagat cgaaaaacaa
     3121 ctccagccag gtggctcggc ggtcggcttc ggaaacggtc tgcagcgtag cggtcgtcat
     3181 gcgcgctgca acgcttccga aggccctcca ggttccttgg cgtcagccga cggttcttcg
     3241 catccccaat gacggagctg ggtacataat gtcccaaagc ggttcccaat atttcgtgac
     3301 ggtcacgata tttcgggaag cagccgtggg attgtccctc gtcacgcacc acggttaagc
     3361 agcataaacc cataagagca agccatttgt gcctgtcgcg cccggtcagg cccaggctgg
     3421 catccggcct gctttgtagc cgcccgaggg acaacagcgg gacgacctcc tacggacgcg
     3481 gcggatctat gaacgacgac ttcgaaacac tcctgactcc ggtgctgaaa accgcctatc
     3541 aaaccgcgag acatctgacg cgcacccagc ccgacgccga ggacctggtt caggaggcgg
     3601 tactgctcgc tctcaaaggc tttgagggat tcgagcgggg caccaacttc cgggcgtggt
     3661 tccttcgaat cctgatcaat gtcttctact ccgactaccg gaagtctcgc cggagagggg
     3721 taagcgtttc gctcgatgat gaggctgcgc ccctgttcct ctaccagcaa accgccgccg
     3781 ctgggatgca ccgcaccgac gccgacccgg cccggagctt catgagccgg ctcgatgctg
     3841 cggagatctc acgagccatc gagggcctgc cgctcgatta ccgcacggtc tgtacgctgt
     3901 atttcgtcga agacttgagc tatcaggcga tagcctcggt tcttgactgt ccgctcggga
     3961 cggtccgctc ccggctccat cgcggccgtc ggctgctgca acagacgctc tggtctctgg
     4021 cagaggagca gggcctggtt cgaaaccccc aggccgtcgc ggtctgaggc cgcgtggctc
     4081 ttggcctagc gcctcgcgtt cgccgccatc tgcgccccca tccgcttctc cgcctccttg
     4141 agctcggggg tcagcgcggg accgaagtcc tcggcctcga acacctggcg gatctcgatc
     4201 tccgactcgg tcccgggaaa gggattcggg gcccgcttga cccattcgat cgcctcttcc
     4261 ttcgacttga cctgaatcag ccagaagccg gcgatcagct ccttggtctc ggcgaagggt
     4321 ccgtccacca cggtccgctt ggttccggag aacctgaccc gggcgccctt cgagctcggc
     4381 tggagtccct cggccgcgag cagcactccg gccttgacca gctcttcgtt gtactgcccc
     4441 atctcggtca ggagcttctc atcgggcagg acgcccgcct cgctgttctc gtcggccttg
     4501 accaggatca tgaatcgcat ggtgcgtctc cttgggtttc ggatacggag ccagggtgcc
     4561 gaccggtctg accggctgaa accaggccct acctacctgt cgaacgaagg gctgccggat
     4621 cgacagtggt gagtggctaa tgcgccacgg gagccggttt gccggtcacc cgccgcttga
     4681 tgatcccttg gtccaccgtt ttcccggttc gggtgacggt ctggaaatgc agggtgtcgc
     4741 ccacgatctc caccagcatg aaggtgcgat ccgccgcgta gcccacctcg gtcactccgt
     4801 tgggacgggt gtcgccccgg cgcagtttgg ccgatccacc ggcggtgaaa tagtggatgc
     4861 ccttctgcgg cttcatccgt tcatagatgt gctcgtggcc cgagaacacc acttccaccc
     4921 cgtacttgag aaagagcggt tcgaggatct cccgaagttc cagctcgggg ccccgcctgg
     4981 ccgtggtata gagcggatgg tgaaagtaag gaatcttcca gccgcccccg gccgccttga
     5041 gctcgtcctc caaccacttg acctgctccg gatccaggta gttgctgtcc agcaccagga
     5101 acgtcgcgtt ctccttcttg aacgaccggt agcgcttacc gtccaggtgg aagggtttgt
     5161 aaaaccgctg gttggggtcg tcgtgattgc ccagcgcggc gtagaactcg accttggcat
     5221 cgagcagcgg ctggtagggc cgctcgaact tccggagcag gtcctggggc cgttcgggtc
     5281 cgtacacatt gtcgcccagc atgatggcga aggtgaaggg gaacgcctgg tagtaacgcc
     5341 agatctggtg ggccacctcg tactgttccc gctcgccggt accggcatcg ccaatcaccg
     5401 cgaagcgcac cgagttctcg cggagcggga gcgtcagctg gtcctgcgcg gcgaggaccg
     5461 ctggtgaacc cgcgagcagc agcccggcga caacggcgcg acgcgccatc ctgccctact
     5521 ccaccaccgg gacggcccgg ggcatgaagt cgaggatgag gttggcctcg atgtcccgca
     5581 ggatcaggta gtgctgcacc acgcggtact cgaccacctc gggcagctgc ggcagcaggg
     5641 gcaacagctc gggcgggaac gtcgcgagag gataggtcgt gggatagatc tggttcacct
     5701 gcggcacgaa atcgggcagc tcctcctgcg cgtcgccccg ggtttccttc acccgcggcg
     5761 gccggcggct gtactcctgc ttgatcaggg tcgcgaacac ggctccggcc cggggcgtga
     5821 agacgtcacc ctgctgggcc tgggcccgcg cgatcgtgac cgcctgagcc agcgccttgg
     5881 cgcgctcagc gatctggacc tggctcatgg tctcggcgag cggtcccacg gaatcagcca
     5941 ggtgattccg cagttgcacg tattcatcga cccccttggt gaactccgcg acggcgtccg
     6001 ctatgggatc gatcggtgac gtctccttgg tacaacccgc gaccgcccct aggagggcag
     6061 cggctgccag cagccgaatc acggtcccgc gcccggcgtt gaaccacacg atggtctccc
     6121 ggcgccgcct ggatggtctc cctgctgttg ccgcgcggct cgtaacggag agacgacgcc
     6181 ggcaaatgca aatcacacgc gggacgctag catggagccg gcaagtggtt acagccagtg
     6241 gggatggatc gaaccggaag gtcagcgggg tctaggcacc aatcagttta tccaacagcc
     6301 ggcgcaacgc gcccttcttc tccctttcag gggggtttcc atcatccagg gtcgccaggg
     6361 cggcaatctg ctccagatcg gccgcgaagg tatcggcctt gggatagcgg tccttcggcg
     6421 ccttggccag ggcccgctcc gaggcccggt ccactgcggc cggcaccccg gggcgatacc
     6481 ggctgggcgg agcggccgtc gcgttcacgt gctgcctgag cacctcggcc agcgacccga
     6541 tgaagggcgg ccggccggtc accatctcgt agaagacgca tcccagtccg tagatgtccg
     6601 agcgcgtgtc cgcgtcctca ccctggatca gctcgggact catgtaggcc ggcgtcccca
     6661 acggcagccc catcgcggtc agccgggcgg cgtcgccgcg gacggcacgt cccagaccga
     6721 aatcggtgat catggcctgg ccgcccgaga gcatgatgtt ctcgggtttg atgtcgcgat
     6781 ggatgacgcc ttgcgcgtgg gcatagctca acccccgggc cacttggagg gcaaccttgg
     6841 ccgcttcgag cagcggcagc ggcccactgg ccagacgatc ccggatcgac tcgccctcga
     6901 cgtatggcat gacgtaccag cagagcccgg tggcggcccc ggaatcgagc agcgagagga
     6961 tgttgggatg ttgcagcgcc gcggtgatcc ggatctcgcg gagaaagcgt tcggccgcgt
     7021 cgggagtcgc ggtttccgga gggaggagct tgacggccac gtcgcgattg tggcggagat
     7081 catgcgccag aaacactcgg gccatcgagc cacgccctaa ctcccgctcg atgcggtaag
     7141 ccccggcgag cgcggtctgg agctgtgatt gtaccgcgcc ggcgtgggtc attcgaagcg
     7201 aacctcgtcg gcgatttcct ggcaggcccg gcggaccgac tcgaccagga gcggtcccgg
     7261 cacactcttc ttggtacgga cctggtagcg gagcaccggg cgatcatcgt cggtctcgac
     7321 ctggtccagc atccactcct tggcttcgcg atccaatatg gtggagatgg tttcccggag
     7381 ggcctcctcg gaagcaccgg ccacaccccg gactaccagc accccgtcgt aacggggctt
     7441 tccaccgtag agatcttcct cgatcttctt gcgccggctc ttggcctttt cgaccagcgc
     7501 ctgcaac
//
LOCUS       DASWKS010000537         3683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_287686, whole genome shotgun sequence.
ACCESSION   DASWKS010000537 DASWKS010000000
VERSION     DASWKS010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3683
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287686"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2545
                     /locus_tag="VGA78_15370"
     CDS             <1..2545
                     /locus_tag="VGA78_15370"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9895308.1"
                     /translation="PVPILGKLYLDGANISTEAIPGVITLLRDRVNPAASVIHVYSVS
                     HLPFSQPAMAPAERGDRPYLNLLDVANRAKQLQRFRDAALERRLTELFTRAIPPGRAV
                     FPVGDKGYLRVWVAPVEPDAPLELNDRLARCCSPEDARQLISEAVADGCRASLEVMLR
                     GSLPADAGVASIPCRQAVEGHRARANPSVALPLLVDLDRKTPAGLGAAPGLPGVCSHC
                     ALSRNGPNGGSSHRAELAVREWKQVGPVWPHELEQSPPPLAAPVPTASGRWAISPDPD
                     PHFVRAKPAYEERTSEVLSALKRTYWNGFQNVRAGDRWPSVRNGGTPGNQRPLVNLLF
                     SGGVFRGVYQLGTLSALSEAGLEPDVIAGASVGSITGAMVAQALAFPPGPERDGRVAR
                     LAATYLAMDRLVLTDRFADFIRGLTLRAAATRFSLHQADGFLRRYDQADSDAFNREAR
                     MVMAGLERLFYLSPFELKELVKAFRLRQSNQVYEMLRAHTQEWLDRMGVGNQILGAEP
                     LALLITEHVLQPLQGERFTVAESVQFDRYLSEAGIYFLATATNLTEGRLEILGEQQLQ
                     GQDTATLLEGLLASSAFPGVFRPRWSWEVMPGSTRQDQYIDGGVMDNLPLDAVAHFLR
                     VASEPELGIVARRPRYQGHDVPHLLFSASLEIIPVEPTERELNRYLTEWPVVWRRARQ
                     LRYNKKLELYALAQRALRDIWNAGTDGGGGWKPVDLEVVMVRPRWLPGTFGFHPMLGF
                     RRQRQAESIAHGCATALLELARTARRHPEWAAGWGLDPDRLPGDPPATDRDPIVPGEA
                     QRGHCWFRPGAVCPFSEERLGATGLPKRTIEELSKIYAACGRPETHQPR"
     gene            3074..3280
                     /locus_tag="VGA78_15375"
     CDS             3074..3280
                     /locus_tag="VGA78_15375"
                     /inference="COORDINATES: protein motif:HMM:NF024929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEX9895309.1"
                     /translation="MGKADWDTQHPGWVLAADIGRSVRLEWGGAWKKLKDLPHFQYTG
                     GLELSACRELFDGGGLPAVWVRVH"
     gene            3331..>3683
                     /locus_tag="VGA78_15380"
     CDS             3331..>3683
                     /locus_tag="VGA78_15380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895310.1"
                     /translation="MSNLFEAALAFVGVMFLLGLAAQSVQEIVKTTFAIKGFTRRKAI
                     EGLVGEAVRVQGQFSIDARAIIDELIRRLAALGQNGVRKGKVRLDELEADQLKDLIES
                     VPASAVPGGLKTRAQG"
BASE COUNT          570 a         1237 c         1292 g          584 t
ORIGIN      
        1 accggttccc atcctcggca agctgtacct cgatggggcc aacatcagca ccgaggctat
       61 tcccggcgtc atcaccctcc tgcgggaccg ggtgaacccc gcagccagcg tcattcacgt
      121 ctacagcgtg tcgcacctgc cgttcagcca gcccgcgatg gcgccggcgg agcggggtga
      181 ccggccctac ctcaatctgc tggacgtggc caaccgcgcg aagcagttgc agcggttccg
      241 cgatgccgcg ctggaacgcc ggttgacgga gttgttcacc cgagccatcc cgcccggccg
      301 ggccgtgttc ccggtgggcg acaaagggta cctccgggtg tgggtggccc cggtggagcc
      361 cgatgccccg ctggagctca acgaccggct ggcccgctgc tgcagccccg aggacgcgcg
      421 gcagctcatc tcggaggccg tagcggacgg ttgccgagcc tcgctggaag tgatgctgcg
      481 gggctccctg cctgctgatg ccggcgtggc ctccattccc tgtcgccagg cggttgaagg
      541 ccaccgggcc cgcgccaacc cgtccgtggc tctcccgttg ctggtggact tggatcggaa
      601 aaccccagcc ggcctgggcg cggcgccggg gctgcccggg gtctgcagcc attgcgccct
      661 ctcccgcaac ggtcccaacg gggggtcgtc ccatcgagcc gagctggcag tgcgggaatg
      721 gaaacaggta ggcccagtgt ggcctcacga gctggagcag tcgccacccc cgctcgctgc
      781 accggtaccg accgcctcgg gccgctgggc gatctcgccc gatcccgatc cgcacttcgt
      841 tcgcgccaag ccggcatacg aggagcgcac cagcgaggtg ctctcggcgc tgaaaaggac
      901 gtactggaac ggcttccaga acgtgcgagc cggggatcgc tggcccagcg tccgcaacgg
      961 cgggacgccg ggcaatcagc gaccgctggt caacctgctc ttcagtggag gcgtcttccg
     1021 cggggtgtac cagctcggca cgctgtccgc gctctccgag gcgggcctcg agcccgacgt
     1081 catcgcgggc gcatcggtgg gctcgatcac cggcgcgatg gtggcgcagg cgctggcgtt
     1141 cccgcccggt cccgaacgcg acggccgggt cgcgcggttg gcggcaacct acctggcgat
     1201 ggatcggctg gtgctcaccg atcgctttgc ggacttcatc cggggtctga ccctgcgggc
     1261 ggcggccacc cggttctcgc tccaccaggc cgacgggttc ttgcggcggt atgaccaggc
     1321 cgacagcgac gcgttcaacc gggaggcgcg gatggtgatg gcgggcctgg agcggctctt
     1381 ttacctgagc ccgttcgagc tcaaggagct ggtgaaggca ttccggctgc gccagtcgaa
     1441 ccaggtctac gagatgctcc gggcccacac ccaggagtgg ctcgaccgga tgggcgtggg
     1501 caatcagatc ctcggcgccg agccgctggc gctgctcatc accgaacacg tgctccagcc
     1561 actccaaggc gaacggttca ccgtcgcgga gagcgtccag ttcgaccgct acctgagcga
     1621 ggccgggatc tacttcctgg ccacggcgac caatctcacc gaggggcggc tggagattct
     1681 gggggagcag cagcttcagg gccaggacac tgcgacgctc ctggaagggc tgctcgcgag
     1741 cagcgcattt cccggcgtgt tccgcccccg ctggtcctgg gaggtgatgc ccggctccac
     1801 ccggcaggac cagtacatcg acggcggcgt gatggacaac ctgccgctcg acgcggtggc
     1861 ccacttcctc cgggtagcct cggagcccga gctgggtatc gtggcgcgac gccctcgcta
     1921 ccagggccac gatgttcccc acctgctgtt ctccgcctcg ctggagatca tcccggtcga
     1981 gcccaccgag cgggagctga accggtacct gaccgagtgg cccgtggtgt ggcgccgggc
     2041 gcggcagctc cgctacaaca agaagctcga gctgtacgcg ctggcccagc gggcgttgcg
     2101 cgacatctgg aacgccggga ctgacggtgg cggcggctgg aagccggtcg atctcgaggt
     2161 cgtgatggtg cggccgcgct ggttgcccgg gaccttcgga ttccatccca tgctggggtt
     2221 ccgccgccag cgccaggcgg agagcatcgc tcacggctgt gccaccgcgt tgctggagct
     2281 ggcgcggacc gcgcgccgcc acccggagtg ggccgcgggc tggggcctgg atcccgaccg
     2341 tcttccgggt gacccgccgg caaccgaccg ggatccgatc gtgccgggag aggcccagcg
     2401 aggtcactgc tggttccgcc ccggcgcggt atgtcccttc agtgaggagc ggcttggcgc
     2461 caccggtctg ccgaaacgga ccatcgaaga attgagcaag atctacgcgg cctgcgggcg
     2521 gccggagacg caccagccgc gatagcggtt catcgactcg gatgaatacg tgcgagagca
     2581 cgctgcatcg acaggactcc catgctgacg acgtaccgag ttcgcaaagg cgatacgttg
     2641 gggaagatcg ccgcccggtt ttacggagat gcggggcgct ttccgctgat tgtatcggcc
     2701 aacgtgatca tgaatccgga ccagctgatt ccggggcaga ccctgaccat ccccgatgcg
     2761 gcagcgaggg agaacggcgc cccggccgct gtccctcccc cgttgcggcc ggcgcctcca
     2821 acccctttgc cgaccttaac gccagacggc ttgcgggact gcatccggtg gtagcgacgc
     2881 ggggtcgaac ccggctcgac ctatgtgccc acgccgagct ggccgtgctg gttactggat
     2941 tatggaccta cgccgagcag gacgcgctgt acgcgcaggg acgaagcaag ccggggcgga
     3001 tcgtcaccta cgctcgcggt ggtgccagct accacaactt cgggctggcg ttcgacatcg
     3061 tcgtacggac gcgatgggca aggccgattg ggacacccag catcccggat gggtgctcgc
     3121 ggccgacatc ggccgctcgg tgaggctgga gtggggcggg gcatggaaga aactcaagga
     3181 cttgccccac ttccagtaca ctggcggctt ggaattatcc gcatgccggg agctgttcga
     3241 cgggggcggt ctgccggcgg tctgggtccg agtgcactga gagagccgcc ccggcgtcgc
     3301 gcccatcgat ggtgacaagg ggagagcacc atgtcgaacc tgtttgaagc cgcgctcgcc
     3361 ttcgtgggcg tgatgttcct gctcgggctc gccgcccaga gcgtgcagga gatcgtcaag
     3421 accaccttcg ccatcaaggg tttcacccgg cgcaaagcga tcgagggtct ggtcggcgag
     3481 gcggtccggg tgcaggggca gttcagcatc gatgcccggg ccatcatcga cgagctgatc
     3541 cgccggctgg ccgcgctggg gcagaatggg gttcgcaaag ggaaggtgcg gctggatgag
     3601 ctggaggccg atcagctcaa ggacctgatc gagagcgtcc ccgcttcggc cgtgcccggc
     3661 ggcctcaaga cccgggcgca agg
//
LOCUS       DASWKS010000538         2531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2888162, whole genome shotgun sequence.
ACCESSION   DASWKS010000538 DASWKS010000000
VERSION     DASWKS010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2888162"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1196
                     /locus_tag="VGA78_15385"
     CDS             <1..1196
                     /locus_tag="VGA78_15385"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEX9895311.1"
                     /translation="GDVGTGKTVVALFAMLLALENGYQAALMAPTELLAEQHAGTLAR
                     FLAAIGLAPELLIGRLSPAEKTMVRSRMASGAARLMIGTHALFQERVAFHRLGLVVID
                     EQHRFGVEQRAALIGKGEAPDVLLLTATPIPRSLALTRYGDLDISVLRQKPPGRGLVR
                     TTIRGPKQRDRVFEFVHAAATRGGQAYVVLPLIEESERADLRAAKVMAEQLTQRWPDL
                     SVGLVHGQLKAEERDRVMRRFREGEVQVLVATTVIEVGIDVPDATIMVIDHPERFGLA
                     QLHQLRGRVGRGAGESHCILLSPGYTPLRLKAFAQTDDGFRIAELDLQERQQGDLLGQ
                     RQHGAAEIRIARFPDDTDLLQRARGLALAILARDPLLEGRDQLALRSRAVARYPRGEL
                     LFRIG"
     gene            complement(1292..>2531)
                     /locus_tag="VGA78_15390"
     CDS             complement(1292..>2531)
                     /locus_tag="VGA78_15390"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895312.1"
                     /translation="TMREFFRRLEDQGLPINLAQNIGHTQARQIVIGDTDRQATPAEL
                     DRMKALVEEAMQAGAIGLSTSLIYPPAIYASEAEITALAEVAGRYGGRYYTHMRNEGD
                     RILEAIDEALRIGQAARTPVHIYHLKTAGQANWGKMDLALSRIKAARAAGQDVGVDVY
                     PYVNNGLGIRALIHPRHAQAGQADLMRRLQDPAIRAQIRQEMEREIGWENWYAHAGRD
                     WDRVVLANIRHADFARYNGQSVQAIAAVTGKDPWDVFFAIAQADAFAMPQTMSEANKI
                     KAMREEFTSFDTDVGPAGGSGIASHPRAWGAFPRVFARYVRDLGALSLEAAVHRASAV
                     AANEIGAYDRGKLAPGLAADIVVFDPLAIRDRATFAEPSAPSEGVRFVIVNGVVVLEE
                     GKYTGAKPGRVLRGPGWDGK"
BASE COUNT          409 a          827 c          869 g          426 t
ORIGIN      
        1 tgggagatgt cgggaccggc aagacggtcg tcgcgctctt tgccatgctg ctggcgctgg
       61 agaacggcta tcaggcggcc ttgatggcgc ccaccgagct tctcgcggag caacacgccg
      121 gcacgctcgc gcgcttcctc gcggccatcg ggctcgcgcc cgagctgctg atcggccggc
      181 tctcgccggc ggaaaagacg atggtccgga gccggatggc gagcggcgca gcccgcctca
      241 tgatcggaac ccacgcgctg ttccaggagc gggtcgcgtt ccatcgcctg ggtctggtgg
      301 tcatcgacga gcagcatcgc ttcggagtgg agcaacgggc ggccctgatc ggcaagggcg
      361 aagctcccga cgtcctgctg ctcacggcga cccccatccc ccgctcgctg gcgctcaccc
      421 gctacggcga tctcgacatc tcggtgctgc ggcagaagcc gccggggcgg ggattggtgc
      481 ggaccaccat tcgtggcccc aagcagcgtg accgggtgtt cgagttcgtg cacgccgccg
      541 ccacccgggg tgggcaggcc tatgtggtgc tccccctgat cgaagaatcg gagcgggccg
      601 acctacgggc cgcgaaggtg atggccgaac agctgaccca gcgctggccc gacctgtccg
      661 tgggtctggt gcacggacag ctcaaagccg aggagcggga ccgggtgatg cggcggttcc
      721 gggaaggaga agtccaggtg ctggtcgcga ccaccgtgat cgaagtcggc atcgacgtgc
      781 ccgacgcgac catcatggtg atcgaccacc cggaacgatt cggtctggcg cagctgcacc
      841 agctgcgggg gagggtaggg cgcggcgccg gcgagagtca ctgcattctg ctctccccgg
      901 gttacacccc gcttcggctc aaggcctttg cccagaccga cgacggattc cggatcgccg
      961 agctggatct ccaggaacgc cagcaaggcg acttgctggg ccaacggcag catggcgcgg
     1021 cggagatccg gatcgcgcgg ttcccggacg acaccgacct gctgcaacgg gcccgcgggt
     1081 tggccctggc aatactggcg cgggatccgc tgctggaggg aagggatcag cttgccctgc
     1141 gaagccgggc ggtggcccgg tatccgaggg gggaattgtt attcaggatt gggtaagtga
     1201 atgcagagtg cccaatgccc agtgcccatt gcagaggtag ggttgaaccg cccacttctg
     1261 caatgggcac tcggcattgg gcactctgca ttcacttgcc atcccatccc ggacccctca
     1321 gaacccggcc cggcttggcg ccggtgtatt tcccctcttc caggaccacc acaccgttga
     1381 cgatcacgaa tctcacgcct tcggaagggg ccgacggctc ggcgaacgtg gcgcgatcgc
     1441 gaatggcgag gggatcgaag accacgatat cggccgcgag accgggcgcc aactttcccc
     1501 ggtcataggc cccgatctca ttggccgcga cggcgctggc acggtgtact gccgcctcca
     1561 gggacaaggc acccaggtcg cgcacgtagc gggcgaagac gcgggggaag gcgccccagg
     1621 cccgaggatg cgaggcaatg ccggacccgc cggccggacc gacgtcggta tcgaacgacg
     1681 tgaactcttc ccgcatggcc ttgatcttgt tggcctcgga catggtctgg ggcatggcga
     1741 aggcgtcggc ctgggcaatg gcgaagaaga cgtcccatgg atccttgccg gtgacggccg
     1801 caatggcttg aacgctctgg ccattgtacc gggcgaagtc ggcgtgccgg atgttcgcca
     1861 ggaccacgcg gtcccagtcc cggccggcgt gcgcatacca gttctcccag ccgatctctc
     1921 gctccatttc ctggcggatc tgagcccgga tggccggatc ctgcagccgg cgcatcagat
     1981 cggcctggcc ggcctgggca tgcctgggat gaatcagggc gcgaatgccc aggccgttgt
     2041 tcacgtaggg gtagacatcc acgccgacgt cctgccccgc ggcccgggcc gctttgatcc
     2101 gtgacaaggc cagatccatc ttgccccagt tcgcctggcc ggccgtcttc agatgataga
     2161 tatggaccgg cgtcctggcc gcctggccga tccggagggc ttcatcgatg gcctccagta
     2221 tccggtcgcc ctcgtttcgc atgtgagtgt agtagcggcc gccgtaacgg ccggcgacct
     2281 cggccagcgc ggtgatctcc gcctcgctgg cgtagatggc cggcggatag ataagcgagg
     2341 tcgacaggcc gatggcgccc gcctgcatcg cctcttccac caaggccttc attcgatcga
     2401 gctcggccgg cgtggcttga cggtcggtgt cgccgatcac gatctggcgt gcctgggtgt
     2461 gcccgatgtt ctgggccagg ttgatcggca ggccttgatc ctcgagccgg cgaaagaatt
     2521 cgcgcatggt a
//
LOCUS       DASWKS010000539         5691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1038817, whole genome shotgun sequence.
ACCESSION   DASWKS010000539 DASWKS010000000
VERSION     DASWKS010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1038817"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..640)
                     /locus_tag="VGA78_15395"
     CDS             complement(<1..640)
                     /locus_tag="VGA78_15395"
                     /inference="COORDINATES: protein motif:HMM:NF026066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEX9895313.1"
                     /translation="MDKTGVARALDQMAAILELKGENPFRIRAFRTAGRTIAGLSSDL
                     DHAIADGSLAATKGIGPALLQIVTELARTNRSEVYDSLHEEVSPGLVEMLSISGLGVA
                     KVRLIHERLGIETLAELEQAARDGRLAELPGFGPKSAANVLRGVAFLRRQATFRLVHH
                     ASHEAEAVRVALEKLPGVTHAITAGDVRRRMELVRDLVIVLVADVPPADVLTQ"
     gene            complement(640..1302)
                     /locus_tag="VGA78_15400"
     CDS             complement(640..1302)
                     /locus_tag="VGA78_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895314.1"
                     /translation="MSDDPLGLLLGGEVEQGLEKVRDALQAEQRDPYDRDAFLMSPTV
                     VELIREARPDTGYGETIDQVVALLHLAYLYWQEGRQVVELDDPGLETVLAAPAGSDGA
                     SSGPPVRPPAYYVRLPPRRVWASPVEGQNAEPLDGWLAARTGDLIRLVALFGVRPDRD
                     GATVVAAEGSPPGNLAREDGTALFAPVLPGGAAAGLYSIVGTEELLELAWRVERRRIN
                     EE"
     gene            complement(1299..2129)
                     /locus_tag="VGA78_15405"
     CDS             complement(1299..2129)
                     /locus_tag="VGA78_15405"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9895315.1"
                     /translation="MAELLRDLGGVRLFERRAGQGPEVTVLHGGPGAHHDYLLPGFDL
                     LARGRTLVYYDQRGGGRSPVAREVPVGWRQHVADLEALRRLWGLEQLVLAGYSWGGLL
                     ALLYALEHPGRVSRLALVSPAPCWRAARQEFDQRFLARSEAPAIRAMRVELAAGGLRE
                     KDPPAYRRRAFELSVAGYFHDPGRARELTPFRITGRTQREVWDSLGDFDLRDRLGSIG
                     VPALVLHGDDDPIPLAASRSLAEGLDARLEVLPQCGHVPYVEAPDRFVALLDPFLPRQ
                     "
     gene            complement(2122..3021)
                     /locus_tag="VGA78_15410"
     CDS             complement(2122..3021)
                     /locus_tag="VGA78_15410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HEX9895316.1"
                     /translation="MRVWSTARFTILLPPGHRFPLAKYDLVREGVVARGLVSEKDILE
                     PERAGWDDLALVHSWRWLGLMRDGGLARSDERRLGFPWSPGLLERSLRTAQATLEAAR
                     AALAQGAGASLAGGTHHAHRDFGEGYCCFNDVALAIRVLQREGMITRAAVLDLDVHQG
                     NGTAEIFAGDPDVFTFSMHGARNFPFRKSRSSLDLELEDRSGDAEYLDLLQRHLDDVL
                     DRARPDLVFYLAGADPYAGDRLGRLSLSIDGLARRDRGVLTACHARGLPVTMVMAGGY
                     AEDLSHLVTIHANSIAELHRVYG"
     gene            complement(3125..3580)
                     /locus_tag="VGA78_15415"
     CDS             complement(3125..3580)
                     /locus_tag="VGA78_15415"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX9895317.1"
                     /translation="MPLLDGDRIVAALRAAFTHDAGRQPLLQLATDRIHGVGSPYTSV
                     YLYMLDGGDLVLEAFAGRPTEHTRIPVGKGVCGTAVAEEQDQNVGDVQTITNYIACNL
                     LTRSELVVLIRRGSLILGQIDVDSDAPDPFTPREHAEVRKVADALAVLL"
     gene            complement(3582..4844)
                     /locus_tag="VGA78_15420"
     CDS             complement(3582..4844)
                     /locus_tag="VGA78_15420"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX9895318.1"
                     /translation="MRIALLGGSLFWFLAAGQAVQSQTDRIRADVSYLADDRLAGRRI
                     GSPGADSAAAYVARRFSALGLKPAPRLGGWLQAFTVSPDAPAAHGSDVGGKTGSNVIG
                     VLPGRDPALAEEYVVIGAHYDHLGLGGRGSLDPDSVGVPHNGADDNASGVAALLEVAR
                     RLALTPPARSVLFLAFSGEELGLLGSTYYVKNPVVPNERVVAMFNFDMVGRLRDGKLI
                     ADGVETATEFRALLDSLNITARFALTAKGGGYGPSDHTAFTVVNRPVLHFWTGTHEDY
                     HRTTDDSPRINFPGIERIAGFAAELTRAVGNRGAGLTFVESTPPAAPSGSSRTSGYGA
                     YLGTVPDMSDNPGGVQLSGVRAGSPAEKAGLKGGDIIVRIGPHEVPDLQAMTDALRAQ
                     APGDVVDITFRRNGELLTVKVTLGQRGA"
     gene            5020..>5691
                     /locus_tag="VGA78_15425"
     CDS             5020..>5691
                     /locus_tag="VGA78_15425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895319.1"
                     /translation="MPAKLSPTSVAANLSCLLYLARHQTAAEDELHEAARVFLASLDG
                     RLVAVESTTGWLAINGTKLPSTSPGVRDVNESLLGHGVSHLELSEPLELADIVRVART
                     LAAFPGAYFTWEEFLASLGPVVRQLKLTRAGTDLPVIRYHDIEPMISAAELREKELIA
                     KLHQKPVVDEGGLILPPIMMQQVEAAADKATVAANRKEEGRRLERLVAAGRTAVESGD
                     YVALLK"
BASE COUNT          956 a         2003 c         1892 g          840 t
ORIGIN      
        1 tctgggtcag cacgtcggcc ggcggtacgt cggccaccag cacgatcacc agatcgcgca
       61 ccagctccat ccggcggcgg acatcgcccg cggtgatggc gtgggtcacg ccgggcagtt
      121 tctccagcgc cacccggacc gcctcggcct cgtggctcgc gtgatgaacc aggcggaagg
      181 tggcctggcg ccgcagaaaa gccaccccgc gaagcacgtt ggcggcgctc ttgggaccga
      241 acccgggaag ctccgccagg cgcccgtccc gggccgcctg ttccagctcc gccagggttt
      301 cgatccccag ccgctcgtgg atcagccgga ccttcgcgac acccaatccg ctgatggaca
      361 gcatttccac cagtccgggc gacacttctt cgtggaggct gtcgtagacc tcggaccggt
      421 tggtgcgggc cagctcggtc acgatctgga gcagggccgg accgatcccc ttggtcgccg
      481 ccagcgaacc gtctgcgatg gcgtgatcga gatcggacga cagccccgcg atggtgcgac
      541 ccgcggtgcg gaacgcccgg atccggaagg ggttttcccc cttgagctcc agaatcgcgg
      601 ccatctgatc cagcgcacgt gcgacgccgg tcttgtccat tactcctcgt tgattctccg
      661 ccgctccacc cgccaggcga gctccaacag ttcttcggtc ccgacgatgg aatagagtcc
      721 cgcggcggct ccgccgggca gcaccggcgc aaacagggcc gtcccatcct cccgggccag
      781 gttgccagga ggcgaacctt ccgccgcgac gactgtggcg ccatcgcggt ccggacgcac
      841 cccgaacagg gccaccagcc ggatgagatc accggtgcga gccgccagcc agccgtcgag
      901 cggctcggcg ttctgccctt ccaccgggct ggcccagacc cgacgagggg gtagccggac
      961 ataataggcc ggcggccgaa cgggcggacc ggaggacgct ccgtcggacc cggccggggc
     1021 cgccagcacg gtttcgagac ccgggtcatc gagctcgacg acctgcctgc cttcctgcca
     1081 atagaggtag gccaggtgca gcaacgccac gacctgatcg atggtctcgc cgtagccggt
     1141 atcgggacgg gcctcgcgga tcaactccac cacggtgggc gacatcagga atgcatctcg
     1201 gtcgtaggga tcgcgctgtt cggcctgaag ggcgtcgcgc accttctcca ggccttgctc
     1261 cacctcacct cccagaagga ggcccagcgg atcgtcgctc attgccgggg caggaacggg
     1321 tccagcagcg ccacgaaccg atcgggagct tcgacatacg gcacatgccc gcactgaggc
     1381 agcacctcga gccgcgcgtc gaggccctcg gccaggctcc gcgaggctgc caggggaatg
     1441 ggatcgtcgt cgccgtgcag aaccagggcc ggaacgccga tgctgcctaa ccgatcacgc
     1501 aggtcgaaat cacccaggct gtcccacacc tccctctggg tccggccggt gatgcggaac
     1561 ggggtcagtt cccgggcccg gccgggatcg tgaaaatacc ccgcgacgga cagctcgaag
     1621 gcccggcggc gataggccgg gggatccttt tcccggagcc cgccggccgc caattccacc
     1681 cgcatcgccc ggatcgccgg cgcctcgctc cgcgcgagaa accgctggtc gaactcctgg
     1741 cgggctgccc gccagcaggg agccggcgac accagcgcga gccgtgagac ccgtccggga
     1801 tgctccagtg catagagcag cgccagcaac ccgccccagc tgtagcccgc gaggaccagt
     1861 tgctccagac cccagagccg gcgcagcgcc tcgaggtcag ccacgtgctg ccgccagccg
     1921 accggcacct cacgcgccac cggggaacgg cccccgccgc gctgatcgta gtaaaccagg
     1981 gtgcggcccc gggccagcag atcgaaaccg ggaaggaggt agtcgtggtg cgctcccggc
     2041 ccgccatgca gtaccgtgac ctccggcccc tggcccgccc gccgctcgaa gagccgcacc
     2101 ccgccaaggt cgcggagcag ctcagccata gactcgatgc agttccgcga tgctattggc
     2161 gtggatggtc accaggtgcg acaggtcttc agcgtaaccg cccgccatca ccatcgtcac
     2221 cggcaagccg cgggcgtggc aggccgtgag cacgccgcga tcgcgccgtg ccaggccatc
     2281 gatcgagagc gacagccgcc ccagccggtc gcccgcgtac gggtcggccc cggcgaggta
     2341 gaacaccaga tcgggcctgg cccggtcgag cacgtcatcc aggtgccgct ggagcaggtc
     2401 gaggtactcg gcatcgccgg agcggtcttc cagctccagg tcgagggagc tccgcgactt
     2461 gcggaaggga aagttgcggg ccccgtgcat cgagaaggtg aatacgtcgg ggtcgccggc
     2521 gaagatctcg gcggtcccgt tcccttgatg cacgtccaga tcgagcaccg cggcccgcgt
     2581 gatcatgccc tcccgctgca gcacccggat ggcgagggcc acatcgttga agcagcagta
     2641 accctcgccg aagtcccgat gagcgtgatg ggttccgccc gccagactgg ccccagcacc
     2701 ctgggccagg gccgcacgag cggcctcgag ggtggcctgg gcggttcgaa gcgaacgctc
     2761 caacagcccc gggctccagg gaaaccccag gcggcgctca tcggaccggg cgagtccccc
     2821 atcccgcatc agccccagcc agcgccaact gtgcaccagc gccaggtcat cccaaccggc
     2881 ccgctcgggc tccaagatgt ccttctcgct gaccagaccc cgggcgacga cgccttcacg
     2941 taccagatcg tacttggcga gcggaaagcg atggcccggc ggcagcagaa ttgtgaaccg
     3001 ggcggtggac cagacgcgca tttgattcag cgattcagcg atttgacgtt tcagcgattg
     3061 ggtttataag gccagggggt tccgtaatcg acaaatcgct gattcgctga atcgctaaat
     3121 gggtttagag aagtaccgcc aacgcatccg ccaccttccg cacctccgcg tgctcccggg
     3181 gcgtgaaggg atccggggcg tcgctgtcga cgtcgatctg gcccaggatc agcgacccgc
     3241 gccggatcag caccaccagc tcggagcggg tcagcaggtt gcaggcgata tagttggtga
     3301 tggtctgcac gtcgcccacg ttctggtctt gttcctcggc cacggcggtt ccgcagaccc
     3361 ccttgcccac cgggatccgg gtgtgctccg tgggacggcc ggcaaaggcc tcgagcacca
     3421 ggtcaccccc atccagcatg tagaggtaca ccgacgtgta gggtgatccg accccgtgga
     3481 tccggtccgt cgccagttgc agcaggggct gccgccccgc gtcgtgcgtg aaggcggccc
     3541 gaagcgccgc cacgatccgg tcgccgtcca agagcggcat ctcaagcccc ccgctggccc
     3601 agggtgacct tcaccgtcag cagttcgccg ttccggcgga aagtgatgtc gaccacgtcg
     3661 cccggggcct gggcccgcag cgcgtcggtc atggcctgca ggtcgggcac ctcgtgcggg
     3721 ccgatgcgca cgatgatgtc gccgcccttg aggccggcct tctcggccgg actcccggcc
     3781 cgcacgcccg acagctggac tccgcccgga ttgtcactca tatcggggac ggtcccgaga
     3841 tacgcgccgt agcccgaggt gcgggaggag ccgctgggcg cggccggagg ggtcgactcg
     3901 acaaaggtga gtcccgcgcc gcggttgccc accgcccgcg tcagctcggc cgcgaacccg
     3961 gcgatccgct cgatgcccgg gaagttgatt cggggagaat cgtcggtggt gcggtgatag
     4021 tcctcgtggg tgccggtcca gaaatgcagc acggggcgat tcaccaccgt aaacgcggtg
     4081 tgatcgctcg gcccgtaccc gccgcccttg gccgtgaggg cgaaccgggc ggtgatattg
     4141 agcgaatcga gcagggcgcg gaactcggtg gcggtctcaa ccccgtccgc gatcagcttc
     4201 ccatctcgca gccgccccac catgtcgaag ttgaacatgg ccacgacccg ctcgtttggt
     4261 acgaccggat tcttgacgta ataagtcgaa ccgagcagac ccagctcctc accgctgaag
     4321 gcgagaaaga gcacgctgcg cgcgggcggc gtcaacgcca gccggcgggc cacctcgagc
     4381 agggccgcaa ccccggaggc attgtcatcg gccccgttgt gcggcacgcc gacgctgtcc
     4441 ggatcgaggc tgccccgtcc acccaggccg aggtgatcgt agtgggcgcc gatcaccacg
     4501 tactcctccg ccagagccgg gtcccgcccg ggaagcaccc cgatcacgtt gctgccggtc
     4561 ttgccaccca catcgctgcc gtgcgccgcc ggggcgtcgg gtgacaccgt gaaggcttga
     4621 agccagccgc cgagccgggg cgccggtttg agccccaggg cgctgaaccg gcgagcgaca
     4681 taggctgccg cggagtcggc gccgggcgaa ccgatccgcc ggcccgccag ccggtcgtcg
     4741 gccaggtagg agacgtcggc ccggatccgg tcggtttggg actggaccgc ctggccggcg
     4801 gccagaaacc agaacagact tcccccaagc agcgcgattc gcatattgga tctctgcaac
     4861 acccgggaca cggctgcggc gcccctgcgc cgcccacctg ccggaggatt ctacaccctc
     4921 ccggcccgct ccggcagctg gccgcgaccg ggcatgcttc gtgcgagacc tctgtagttc
     4981 aacgatttac aacgttttcg ctgagggtga cgaaccggca tgccagctaa actcagcccc
     5041 acatcggttg ccgcgaacct gtcgtgtctg ctctacttgg ctcgtcacca gacggcggct
     5101 gaggacgaac ttcatgaggc ggccagggtg ttcctggcga gcctggacgg gcgcctggtg
     5161 gccgttgaat ccaccaccgg ctggctggcg atcaacggga ccaaactgcc gtccaccagt
     5221 ccaggagtcc gggacgtcaa cgagagtctc ctgggccatg gggtcagtca cctggaattg
     5281 tcggagccgc tggagctggc cgacatcgtt cgggtggcgc gaaccctggc cgcgtttccc
     5341 ggcgcctatt tcacctggga agagtttctg gcgtcactcg gtccggtggt ccggcagctc
     5401 aagctgaccc gggccggaac cgatctgccg gtcatccgct accacgatat cgagccgatg
     5461 atcagcgccg ccgagcttcg cgagaaggag ctcatcgcca agctgcatca gaagccggtg
     5521 gtggacgagg gcggcctgat cctgccgccg atcatgatgc agcaggtgga agcggccgcc
     5581 gacaaggcaa ccgtcgcggc caaccggaag gaagaagggc gccggctgga gcgcctggtg
     5641 gcggcgggac ggaccgccgt ggagtccggt gactatgtgg cgctgctcaa g
//
LOCUS       DASWKS010000540         6689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_288547, whole genome shotgun sequence.
ACCESSION   DASWKS010000540 DASWKS010000000
VERSION     DASWKS010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6689
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288547"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1497)
                     /locus_tag="VGA78_15430"
     CDS             complement(31..1497)
                     /locus_tag="VGA78_15430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895320.1"
                     /translation="MVPGFRASVPNAIAVNPLREAGSMKQTLLFAGLGLVLVAGCSDS
                     SRTGSDLPSAPGVIVLGPPQQPEGCVFKNAQDYAKNYFKLSSDRRATASALSDAQKLT
                     AGDPLRDDFLFDVLGAVARVGGTDDAGDAGIGALLVNEVVDCGGEDWIVTDKRAFIPV
                     LTSALTEGNLTLGIGGEFAIRGLGTPETEGAVVAGSGLFAFDINVGQGSWADVGRVAV
                     FLGDVSGENGSFGVGKVQNVVYRQGFISDGDPEPNFTTDDQFAAEFCLDGLNTTDLGN
                     RLGRNRGVGNNTVLQQDGADVVGFCGDLAAAGGSSHSRSKPTVFARLLNSMVGLFKPT
                     PLQALMFVPPWSGSSGGEEEGIFSSDYAVVNVEAVFDSILQPIVNQVKDSTFDVTVTV
                     CALNTCGNPIGVAGVPLENAEVIITVIGNFGSPIVLSGTGCGTPDNLSCTGHTDENGV
                     VTFTVSLNKTGSYTFSAVTKFDPFEVQTSSNQFIVNPN"
     gene            complement(1527..4184)
                     /locus_tag="VGA78_15435"
     CDS             complement(1527..4184)
                     /locus_tag="VGA78_15435"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895321.1"
                     /translation="MRGGDGHTSSFSVHLSGAFDPTGPSGGGPVNLRSPVPGDLPPLE
                     TGDQISRLRSALAEHYDVQRSVGEGGMAMVYLAQDLKHGRMVAIKVLRPELGASIGTD
                     RFLREIRTAAQLQHPNILALYDSGEANGLLFYVMPFVEGESLRDRLNRDKQLPIEEAV
                     MLVREAADALHFAHQHRVIHRDIKPENILLQGGHALVADFGIARALSEAGGEKLTQTG
                     MAIGTPHYMSPEQGMGGNVDARSDVYSLGCVLYELLVGQPPFDGPNAMAILARHSMEM
                     VPGMRVVRKTIPEELEAVVDEALEKTAADRFQSAADFSEALQSVDLSAVPRRHTTRVT
                     ISRVAARKRQRRKTMMLAGSAVGVLLLGGAGAFFATRGGGSGARPDREGYDPNSIAVL
                     YFEGRGGDSLKFVADGLTEALIKELSGVGGLKVISHNGVRPYRGTEVKPDSIGRALRV
                     GTLVSGVVAQSGDRLRVDVSLLNAKSGEQLDGTTLERPRSEIFVLQDSLAAQVSHFLR
                     QRLGQEVRLRASRLGTRNTRAWELAQQAALATKDAESLLTAGDTAAARRQFATADTLY
                     ARAAEPDRNWVAPVTERARVAYRGCRIAGGMDKVLNDQCTRIGLELAEAAVSLDSTDA
                     DARELRGTLLYRRWLYNLEPDADRADRLFKSAEHDLRESIRVNPLQSSAWNMLSHLLA
                     NKAELAEAQLAARKAYESDPYLANANLSVWRLFSYAIDVPDPDPFDATHWCEEGERRF
                     PKEPRFVECRLMIYALPNAKPDVPAAWGMLERYVELSGVPLREARRKRGEMILSMVLA
                     RAGLGDSAKRVAERARAPISLDPNRELVYLEAMTLGIIGDKDAAFQRLTEFAAASPQQ
                     AKNLVKEVSWMSRDLRSDPRWQQLSATAR"
     gene            complement(4300..5028)
                     /locus_tag="VGA78_15440"
     CDS             complement(4300..5028)
                     /locus_tag="VGA78_15440"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: protein motif:HMM:NF008877.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HEX9895322.1"
                     /translation="MDTRAQGSSAESLFTSQDWSRYSEENHAVWRILYARRMEQLARN
                     ASQVFLDGARTIGLEPDQVPDLAEVNARLAPLTRWTAVPVTGFLPAREFFACLAQRRF
                     PTTVTVRPRSGIDYVPEPDIFHDVFGHVPLHADPVFADVLERLGQLGCTARDATEVER
                     ITRLFWFTVEFGLVHERGEVRIYGSGLISSHDDATNALSPGCDRRPFELDRVVAQSFE
                     IDRLQPVLFVLDSFEQLFEEVGRL"
     gene            complement(5285..5382)
                     /gene="ffs"
                     /locus_tag="VGA78_15445"
     ncRNA           complement(5285..5382)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VGA78_15445"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(5514..>6689)
                     /locus_tag="VGA78_15450"
     CDS             complement(5514..>6689)
                     /locus_tag="VGA78_15450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895323.1"
                     /translation="LGLDAAWTEDLAAVAGELVSAGSPMAPGRVTGRAQSAYAFPAGR
                     EASTRLALHLLREGFRVGVATQPLSADRSRLGVGTYIVRTQRNPAALHDRIRQLAERF
                     SADVNAIQSAFPDSGMGVGSEQVAALKTPKILLGAGSGVSQTSFGDAWFYLERELEYP
                     VVPVELARLGAVNLWDYNVLVLPEGSGSTMRLQLGNIDRLKRWVQEGGSIIAFGGAVN
                     LLNHKDVGLTTVGIVGHPPEGQEAKPAGKDSVATDTTLSATARPGPPLVSATAPGAGR
                     PEGVPGVIARGTLDRTHWLTYGYGRDQLAVQVSNDFLTPSKKGDNPVSFVGRDLILAG
                     FTWPDNTERLLTGSVWAVVENVGAGKVIVFADNPLFRAFWRGTAGLFTNALLFGAGR"
BASE COUNT         1232 a         2245 c         2047 g         1165 t
ORIGIN      
        1 ggcccctccc tcagttcatt tgcctcgggc tcagttcggg ttcacgatga actgattgga
       61 ggacgtctgc acctcaaatg ggtcgaactt agtgaccgcc gagaacgtgt aactgccggt
      121 cttattgagg ctgaccgtga aggtaacgac tccattttcg tcggtgtgcc ccgtgcagga
      181 caggttatcc ggcgtaccgc atccggtccc cgagagcaca attggacttc caaagtttcc
      241 aatcacggtg attatgacct cggcgttctc caaaggcacg cccgccaccc caatcgggtt
      301 cccgcaggta ttcagggcgc acaccgtgac agtgacgtcg aaggttgagt ccttgacctg
      361 gtttacgatt ggctgcagga tggagtcgaa gaccgcctcc acattcacca cggcatagtc
      421 gctggagaag atgccctcct cctcaccgcc gctcgagccg gaccagggtg gcacgaacat
      481 caacgcctga agcggggtgg gcttgaagag gccgaccatg ctgttcagaa gccgggcgaa
      541 aaccgtaggc ttcgatcgag aatgcgatga cccgccagcc gcagcgaggt cgccgcagaa
      601 cccgacaacg tcggcaccat cctgttgaag caccgtattg ttgcccacac ccctgtttcg
      661 gcccagccgg ttacccaagt cagtagtatt cagaccatcc aggcagaact ccgcggcgaa
      721 ctggtcatca gtagtaaaat tgggctccgg gtcaccgtcg gatatgaagc cctggcggta
      781 gacgacgttc tgcaccttgc ccacgccgaa actgccgttc tccccggaga cgtcgcccag
      841 gaagactgcc actcgtccta catcggccca acttccctgg ccaacgttga tgtcaaacgc
      901 gaacaggccg ctcccggcga cgaccgctcc ttcggtctcg ggagtgccca agccccgaat
      961 cgcgaattcc ccccctatgc ccaaggtgag gttgccctcg gtgagggcac tcgtcaggac
     1021 cggaatgaag gcccgcttgt ccgtcacgat ccagtcttcc cccccgcaat cgacgacctc
     1081 gttgaccagg agagcaccta tccctgcgtc ccctgcgtcg tcggtcccgc caacccttgc
     1141 cacggctccg aggacatcga acaggaaatc gtcccgcagc gggtcaccgg cggtgagctt
     1201 ctgcgcatcg gagagagcgg aagcagtagc cctcctgtca ctggacagtt tgaagtaatt
     1261 cttcgcgtaa tcctgggcgt tcttgaagac gcatccctct ggctgctgcg gtgggccgag
     1321 tacaatgacc ccgggggcgc tgggcaggtc cgatcccgtc cgactggagt cggagcaccc
     1381 tgccaccaaa acgagcccca gccccgcaaa taataaagtt tgcttcatac tccctgcctc
     1441 cctcaacggg tttaccgcga tggcgtttgg aacactggcc ctgaacccgg gtaccatacc
     1501 cctcaaacgg cacctgtcaa gccgagctag cgggcggtgg cactcagctg ttgccagcgg
     1561 gggtcggaac ggaggtcgcg ggacatccag ctgacttcct tgacgaggtt cttggcttgc
     1621 tgcgggctgg cggcggcaaa ctccgtgagg cgctggaatg ccgcgtcctt gtcgccgata
     1681 attcccaggg tcatcgcttc gaggtacacc agctcccggt tcgggtccag tgagatgggg
     1741 gcccgggccc gctccgccac ccgcttggcg ctgtctccca gcccggcccg agccagcacc
     1801 atggagagga tcatctcgcc ccgtttgcgc cgcgcctctc ggagcgggac gccgctcaac
     1861 tccacgtagc gctccagcat accccacgcg gcgggaacat caggtttcgc gttcggcagc
     1921 gcgtagatca tgaggcggca ttcgacgaag cggggctctt tgggaaagcg acgttctccc
     1981 tcctcgcacc aatgagtggc atcgaacgga tcggggtccg gcacgtctat cgcatacgag
     2041 aacaagcgcc acaccgagag attggcattg gcaaggtagg gatctgactc gtaggccttg
     2101 cgcgccgcca gctgcgcctc cgccagctcg gctttgttgg cgagcaggtg gctcagcatg
     2161 ttccaggcag agctctggag cggattgacg cggatcgact ctcgcagatc gtgctcggct
     2221 gacttgaaaa gccggtccgc ccgatcggca tccggctcga ggttgtacag ccagcgacgg
     2281 tagagcaaag tgccgcgaag ctcgcgggca tcggcgtcgg tcgaatccaa tgacacggcc
     2341 gcctcagcca gctcgaggcc tatgcgggtg cattggtcgt tcagcacctt gtccatgcct
     2401 cccgcgatcc gacaaccccg gtatgccacc cgggcacgtt cggtcaccgg tgcaacccag
     2461 ttccggtccg gttcggccgc ccgggcgtac agcgtgtcgg cagtggcgaa ctgtcgccgg
     2521 gcggcggccg tatcccccgc cgtcaagagc gattcggcat ccttggtagc cagggccgct
     2581 tgctgggcca gctcccaggc acgggtgttt ctggtaccga gacgggacgc ccggaggcgc
     2641 acctcctggc ccagccgctg tcggaggaag tgcgacactt gagcggccaa gctgtcctgc
     2701 agtacgaaga tctcgctccg gggtcgctct aatgtcgttc cgtcgagctg ctcgccggat
     2761 ttggcgttca acagcgatac gtcgacccgc aggcgatccc ctgactgggc caccacgcca
     2821 ctcaccagcg tgccaactcg cagggctcga ccaatactgt cgggcttgac ctcggttccg
     2881 cggtacggcc tcacgccgtt atgtgaaatg accttgaggc caccgacccc actcagctcc
     2941 ttgatcaagg cttcggtcaa cccgtcggcc acgaacttga ggctgtctcc accccgccct
     3001 tcgaaataga gtactgcgat agagttcgga tcataacctt ccctgtcggg ccgtgcccca
     3061 ctgcccccac cccgggtggc gaagaaggca cccgccccgc cgagcaggag tactccaacc
     3121 gccgatccag ccagcatcat ggttttccgc cgctgccgct tgcgagccgc cacccgcgat
     3181 atcgtgaccc gggtggtatg acgccgggga accgccgaga gatcgaccga ttgcagggct
     3241 tcggagaagt cggccgccga ctggaaccgg tccgccgccg ttttctccag cgcttcatcg
     3301 accaccgctt cgagctcttc cggaatggtc ttccggacca cccgcatgcc cggcaccatc
     3361 tccatcgagt gacgcgccag aatggccatg gcgttggggc cgtcgaacgg aggctgcccc
     3421 accagcagct cgtacaggac gcagccaagg ctgtagacat cgctccgggc gtcgacgttc
     3481 ccacccatcc cctgttccgg actcatgtag tggggcgtgc cgatggccat gccggtctgg
     3541 gtcagctttt cgccgccggc ttcgctcaac gcacgagcaa taccgaagtc ggcaaccaac
     3601 gcatgcccgc cctgcagcag aatgttttcc ggcttgatat cgcgatggat tacgcggtgc
     3661 tggtgggcaa agtggagcgc atcggccgct tcgcggacca gcatgacggc ttcttcgatc
     3721 gggagttgct tgtcgcggtt cagccggtcg cgaagggact caccctccac gaaaggcatg
     3781 acgtagaaga ggaggccgtt ggcctcgccc gaatcgtaga gcgccagaat gttggggtgc
     3841 tgaagctgcg cggcggtgcg gatctcccgg aggaaacgat cggtcccaat ggaagcgccc
     3901 aactcgggcc ggaggacctt gatcgcgacc atccggccgt gcttcagatc ctgggcgagg
     3961 tagaccatcg ccatcccacc ttcgcctacc gagcgttgga cgtcatagtg ctcagcgagg
     4021 gcggaacgga gccggcttat ctgatcgccg gtttccaagg gcggcaggtc ccccgggacg
     4081 ggcgatcgca gattgaccgg accgcccccg gacggccccg ttggatcgaa ggctcccgac
     4141 aggtgtaccg agaaactgga cgtgtgaccg tcaccccccc gcataaccga tctacgggcc
     4201 ctagagccta aggtaggaag acaccagcct tcaaacaact cttaaagttg tcaggttcgg
     4261 cttccttttg ggagtgggtc tgccctggaa actgcaccgc tagagtcgcc cgacctcctc
     4321 gaacagctgc tcgaaagagt ccaaaacgaa tagaaccggc tggagccgat cgatctcgaa
     4381 cgactgcgcc accacccggt cgagctcgaa aggacggcgg tcgcacccgg ggctaagcgc
     4441 attggtcgca tcatcatgcg atgagatcag cccgctgccg taaatccgga cttcaccccg
     4501 ctcgtgcacc agcccgaatt cgacggtgaa ccagaacagc cgggtgatcc gctcaacctc
     4561 ggtcgcgtcc cgggcggtac agccgagctg gcccagccgc tccagcacgt cggcgaacac
     4621 cgggtcggca tgcaggggga catggccgaa gacgtcgtgg aagatgtccg gttccggcac
     4681 atagtcgatg ccggaacggg ggcggacggt gaccgtcgtc gggaaccggc gttgagccag
     4741 gcaggcgaag aactccctgg ccgggagaaa gccggtgacc ggcaccgcgg tccaccgagt
     4801 cagcggagcc agacgggcgt tcacctcggc cagatcgggg acctggtcgg gctcgagccc
     4861 gatggtcctg gccccgtcga gaaaaacctg gctggcgttt cgcgccaact gttccatgcg
     4921 acgggcatac aggatccgcc acacggcgtg attctcctcg ctgtaccgac tccagtcttg
     4981 agaggtaaag agactctcgg ccgagctccc ctgcgccctg gtgtccatcg tctcctccgg
     5041 aaaaaaagaa agcggcccgt gggtttccac gggccgccgc tgcttaggtg cgagttgcgc
     5101 tactaccgca tgttcaccca gccacgaccc gtggaaggag gacggtagta gtaaacacga
     5161 atgcagaatg cagactgcag cgtgcaggat gcagagggag tgtcacaacc cgacttgatg
     5221 ctcatgacca tgtcgcgtgg gcccctatga agtccgaact ctgcattctg cactctgcat
     5281 tggaatgccc caggcacccc gaagcaacac cggacatcgc ttagcgctgc taccggcgag
     5341 gtcctgacgc gattcgcgcg ccggcgccct tcggacctgg ggcacctcaa atatatcacc
     5401 ttccaacctc gctcctagtc caggtcggaa aagtcggaaa agtcggaaag atcggaacga
     5461 ctcggcattc ccggtcttcc gacttttacg acccttccga cccttccgac ccgttatcgc
     5521 cccgccccga agagcagggc attggtgaac aatcctgccg tcccgcgcca gaaagcccgg
     5581 aacaacggat tgtcggcgaa gacaatcacc ttccccgcgc cgacgttctc caccaccgcc
     5641 cagaccgagc cggtcaacag tcgttcggtg ttgtcaggcc aggtgaatcc cgcgaggatc
     5701 aggtcccggc ccacgaacga caccgggttg tcacccttct tcgaaggggt gaggaaatcg
     5761 ttcgagacct ggaccgccag ttggtcgcgt ccgtagccgt acgtcagcca gtgggtccgg
     5821 tcgagagtac ctcgtgcgat gacgccgggc acaccttcgg ggcggcccgc gcccggcgcc
     5881 gtggccgaga ccaggggcgg tccgggccgg gcggtggcgc tcagggtggt gtcggtcgcg
     5941 acgctgtcct tgccggccgg tttggcctcc tgaccctcgg gggggtgacc cacgatgccc
     6001 acggtcgtga gcccgacgtc cttatggttg agcaggttca ccgcgccccc gaaggcgatg
     6061 atgctgccgc cttcctgtac ccaacgcttc agccggtcga tgtttcccag ttgcagccgc
     6121 atggtgctgc cggaaccctc gggcagcacc agtacgttgt aatcccacag gttcaccgcg
     6181 cccagccgcg ccagctcgac cggcacgacc ggatactcga gctcccgctc caggtaaaac
     6241 caggcatcac cgaaggaggt ctgcgagacc ccgctgccgg cgcccagcaa gatcttgggc
     6301 gtcttgagcg ccgcgacctg ctcgctcccc acccccatcc cgctgtcggg aaaggccgac
     6361 tggatcgcat tgacgtcggc gctgaaccgt tccgccagct ggcggatgcg atcgtgcagg
     6421 gcggctgggt tgcgctgggt ccgaacgatg taggtgccga cacccagccg gctgcggtcg
     6481 gctgagagcg gctgggtcgc gacgccgacc cggaagcctt cccggagcag gtgcagcgcc
     6541 agccgggtgc tggcttcgcg ccccgcggga aaggcatacg cgctctgggc ccgcccggtg
     6601 acccggcccg gggccatcgg gctgccggcc gagaccagct cacccgccac cgcggccagg
     6661 tcctcggtcc aggccgcatc caggcccag
//
LOCUS       DASWKS010000541        11833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2163157, whole genome shotgun sequence.
ACCESSION   DASWKS010000541 DASWKS010000000
VERSION     DASWKS010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11833
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163157"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1038
                     /locus_tag="VGA78_15455"
     CDS             235..1038
                     /locus_tag="VGA78_15455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895324.1"
                     /translation="MTHATVPLIRRKAFETRRRDNWWVQPLVIFIILAAFVVYATWAA
                     FQNAHYTFGPYLSPFYSPEIFGDSSHAWFGPKPGWWPGWLPFSPALIILPFPALFRFT
                     CYYYRGAYYKAFWADPPGCSVGEPRQSYLGERYFPLVFQNIHRYFMAIAVVFLFILTW
                     DVWKALWFTDPATGTSRFGIGVGTVVLALNVVCLAGYTIGCHSMRHILGGFRDQFSRK
                     PGFRVPYNCATCLNLAHHRWAWTSLIVVAFSDLYIRLCSMGIWTDLRIL"
     gene            1035..2849
                     /locus_tag="VGA78_15460"
     CDS             1035..2849
                     /locus_tag="VGA78_15460"
                     /inference="COORDINATES: protein motif:HMM:NF005866.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HEX9895325.1"
                     /translation="MSPEVQTFDHDVLVIGAGGAGLRAAIEAAARGVSVGLVCKSLLG
                     KAHTVMAEGGVAAALGNVDERDGWEVHVTDTLRGGQYVNNWRMAELHAREAPARVKEL
                     EAWGALFDRTPDGRILQRNFGGHRYPRLAHVGDRTGLEMIRTLQDHGVHQGIDVHMEV
                     TVVTLFTREGRVSGALAYDRERGRFRLFRARAIVLATGGIGRAYSITSNSWEYTGDGH
                     ALAYHAGAALQDMEFLQFHPTGMVWPPSVRGILVTEGVRGEGGILVNNQGRRFMFDDI
                     PDNYKPQTAGTPEEGWRYVMGDREARRPPELLTRDHVARCIVHEVREGRGSPHGGVFL
                     DIAWIKERLPNAAEHIRRKLPSMYHQFKQLADIDITTTPMEVGPTTHYIMGGVRVDGD
                     SQMSTLPGLFAAGEVAAGLHGANRLGGNSLSDLIVFGKRAGEYAAAFAQEHAALTPDP
                     GEVTQAATEALEPFERAGGENPYAIQHDLQLMMQDLVGIVRREDEMLRAREELAALWH
                     RAGKAAVPGNREYNPGWHTALDLKNLLTVSDALVSSALERRESRGGHFRDDYPEKQAE
                     YGGFNLVVQKGPDGRMEVRREPVVGVTAALKALVEKYK"
     gene            3028..3783
                     /locus_tag="VGA78_15465"
     CDS             3028..3783
                     /locus_tag="VGA78_15465"
                     /inference="COORDINATES: protein motif:HMM:NF009052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEX9895326.1"
                     /translation="MGKAEFEIWRGERGQGVFVKYGVEVEEGMVVLDAVHQIQATQAP
                     DLAVRWNCKAGKCGSCSAEVNGHPCLMCMTRLSEVDLSEPVTIEPMRAFPHHRDLVTD
                     VSWNFRVKKQIRPFTPRRPDATDGTWRMEQQDVDRVQEFRKCIECFLCQDVCHVLRDH
                     HLHEEFVGPRYLVYAAALEMHPLDTLDRREELRKAHGIGYCNITKCCTKVCPENITIT
                     DNAIIPLKERVMDDAFDPIVKLVGLMTKKVAGP"
     gene            3916..4419
                     /locus_tag="VGA78_15470"
     CDS             3916..4419
                     /locus_tag="VGA78_15470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895327.1"
                     /translation="MFELKPISGSGIPGALEKAERYRLLNEPDAAESICLDVLDLDPA
                     NQEALVMLLLTRTDQFAGAHGASEAAAKEVLPRLESAYDRSYYAGLIAERRGKALLGA
                     NWPGSQPMAWHCFREAMDWYDKATGLRAAGNDEALLRWNTCARVLNAHPHLEPRGEVE
                     YQPTLDD"
     gene            4498..4980
                     /locus_tag="VGA78_15475"
     CDS             4498..4980
                     /locus_tag="VGA78_15475"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HEX9895328.1"
                     /translation="MQKPIVALLVLATGAAPLAAQKIENLRKLEFMAGCWQAQTGKDQ
                     TVQELWSQPNDSLILGFTQYFTKEKPTNFDFNHIRRTDSTVYLILSPHGQPADTFRIK
                     TLADEVASWERGGTKFPGLVMYRKASDGSLIARLEAPPTLDQPSVEVRFEKTKCPGQK
                     "
     gene            4988..7327
                     /locus_tag="VGA78_15480"
     CDS             4988..7327
                     /locus_tag="VGA78_15480"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9895329.1"
                     /translation="MTLIVPLAFLAVVDTAGVEFRGVEGRTRVPLPRLELEITVDGVL
                     DEGAWQQAPRLTGFSQYTPVDGRPAERNTEVLVWYSPHAIHFGIRAHAPPGTIKATLA
                     DRDKISGDDLIEIFLDTYNDGRQALVFGVNPLGVQSDGALSEGARRSGSDASGGREST
                     DLSPDFVYASKGRLTEFGYEVEIRIPFKTLKYQAAEPQDWRLNVIRRVTASGHEDSWV
                     PARRTSPTFLGQSGTLQGLSGLRRGLVMDINPVITAHANGAPDPGGWGYDRAVEPGGN
                     IRWGVTSNLTLNGTVNPDFSQVEADASQVVTDPRQATFFPEKRPFFLEGIEQFTTPNN
                     LIYTRRVVAPIAATKLTAKTGGTNLALLLAADDRELSAGGDDTPLFAVVRVQRDLGKS
                     ARAALIYTDRTEDAVANRVVGADARAVFGGITLAGQLAGSATTRDGSTTWAPLWQADL
                     ARNGRRFGLSYTFQGISDQFTASSGFISRRGIVQLGFNHALNFYGRPGGTFERTTLGV
                     NLRGRWQYADFVHGGPIQDRQLFLVGNVRLRGGWFLGVTGIAEQFGYDAPLYRDYAIQ
                     RYQSGVVVDTIAPYPVAPPIQNRDLSMTAESPRIGPLQFRVNYILGRDENFFEWSPAN
                     IRIVNATVQLRPTNQLRLDGSYIQQWYQRRSDHTVVGETHIPRLRLEYQVSRAVFLRA
                     VAEYASRSNDDLRDDGRTNDPILIRDPVDGIYKRSLALAKEVNDLRADFLFSYQPLPG
                     TVFFLGYGGTYAEDRRFRFDEVERRADGFFLKASYLFRL"
     gene            7693..8157
                     /locus_tag="VGA78_15485"
     CDS             7693..8157
                     /locus_tag="VGA78_15485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895330.1"
                     /translation="MKSLVQRLDPVRVEALPGFGGALADFERRRASGGGFYLTEAEID
                     RAAPIAVSDLLRRLPVLRVADSLGVPQAYSTRGLKLVPLGGTMVVAPCPMRVALDGQL
                     LPAGTSLDLLPPAAVGGIEVYAGSATIPVEIAAGARDVSCGLIVIWSRRGRR"
     gene            8231..9031
                     /locus_tag="VGA78_15490"
     CDS             8231..9031
                     /locus_tag="VGA78_15490"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HEX9895331.1"
                     /translation="MFHTRNTPALLAALALAAPLAAQESAQEWARDCDVGNSRSESYC
                     EVRESTLRATGSLRVDAQPNGGIRVYAWDRNEVKVVARVAAWARTEEEAKALAGEVKV
                     DAGEREIRSTGPETRGRRGWYVSYDIWAPSRTDLRLASTNGGLTVEGISGRLDLETTN
                     GGIHLASVGGDVNAETTNGGIDVTLQGRRWDGEGLRARTTNGGVRLTVPEGFNADLEA
                     STTNGGMDFEFPVTLQGRIHKRISTKLGDGGPLISVATTNGGVTIRRR"
     gene            9140..9808
                     /locus_tag="VGA78_15495"
     CDS             9140..9808
                     /locus_tag="VGA78_15495"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX9895332.1"
                     /translation="MAEPRFVPLTTWQEYSPDEMTLRAARFYQEIARRRTVRQFSERP
                     VPRQLIEQCLLAAGTAPSGANLQPWHFVVIQDPAVKREIRQAAEREERDFYHGRAPAD
                     WLEALAPLGTDEHKPYLETAPWLIAVFAERYGVAPSGARLSHYYVQESVGIATGLLIA
                     ALHHTGLVCLTHTPSPMGFLNVVLERPAHEKPFLLLVTGYPAADAQVPDITRKGLNEI
                     ATFR"
     gene            9924..11726
                     /locus_tag="VGA78_15500"
     CDS             9924..11726
                     /locus_tag="VGA78_15500"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9895333.1"
                     /translation="MTLAELQGRIESVMAKHKVPSVGIALVHRDSTLWVAGLGKADVA
                     GGKAANAESLYRIGSTSKAFVALLMVLLEQRGKLKLDDPISQYAPEIQFENRWESTDP
                     IRIVHLLEHTTGWDDLALRDYANNDSTPLTLRQGLDYTPRTRTSRWRPGTRVSYCNSG
                     PPVAAYIAEKIEGKTVEELVRDWLFTPIGMPTATYLRDPALRDRMVTLYHSDGETPHD
                     YWHVLQRPAGSINASPIDMAAYVRFLLNRGAVNGRQILPATAIEAMERPRSSGTAKAD
                     LPVGYGLHLATYVDSGFVWMGHDGGVEGGITMMAYRPQTGLGFAFMITSGNGAAVQEI
                     DLLVRRFLTRGESRPEGPPPAPMPSEARTRGGWYRPDNPRSQFTYFLERLVLLTRVTV
                     SDSSLVMNPILGDSKTYLPVSGLKFRGSDEPVATLALTSNPEDGREAGIERVGYLLPA
                     EYHRISTVTALLEIGLTVAWILGMVLTLVFALIWIPRRLLGRLKTVKRMGPRLWPLLA
                     TLSVVAFVLMFVAISEDLLGQLGVPTRWSWGLFIATLVFPAAALAGFVSARRAKPAEA
                     GRFARRLGLIVSVLNLVAAGYLAWWGIVGWRSWA"
BASE COUNT         2003 a         3896 c         3917 g         2017 t
ORIGIN      
        1 aatgcaaaag gcgcatgcga acccaatgct cgccgcgcct tcaactcacg aggtcgcctg
       61 cctcggtcgc caaggggccg cctactgcgg ctcttttttc atgcctgagc ctagggtagg
      121 ctgccccgcg ggacctgtca atatgaacgg aatccggctg caccgaacct gcaccgttcc
      181 agggcgggtt cgactatctt cgaccatctt cgaccggttc agggagcctc cggcatgacg
      241 cacgcgacgg tcccgctcat ccgccgcaag gccttcgaga ctcggcggcg cgacaactgg
      301 tgggtgcagc cgttggtcat cttcatcatc ctggcagcgt tcgtcgtcta cgccacctgg
      361 gcggcattcc agaacgcgca ctacaccttc ggtccctatc tctcgccctt ctacagcccc
      421 gagatcttcg gtgattcgtc ccatgcctgg ttcgggccca agccgggatg gtggccgggg
      481 tggctgccgt tctcgcccgc cttgatcatt ctgccgtttc cggcgctgtt ccggttcacc
      541 tgctactact accgaggcgc gtattacaag gcgttctggg ccgatccgcc gggctgcagc
      601 gtgggtgaac cgcgccagag ctacctgggc gagcgctact ttccgctggt gttccagaat
      661 atccaccgct acttcatggc catcgccgtc gtcttcctct tcattctgac gtgggatgtg
      721 tggaaggcgc tgtggttcac cgaccccgcc accggtacca gccggttcgg catcggagtc
      781 ggcacggtgg tgctggcgct gaatgtcgtc tgcctggcgg gctacaccat cgggtgtcat
      841 tccatgcgcc acatcctggg cgggttccgg gatcagttct cccggaagcc cggattccgg
      901 gtgccttaca attgcgcgac ctgtctcaac ctggcgcatc accgctgggc ctggaccagc
      961 ctgatcgtgg tggccttctc cgacctctac atccgactct gttccatggg gatctggacc
     1021 gacctgagga ttctgtgagt cccgaggtcc agacgttcga tcacgatgtc ctggtcatcg
     1081 gcgccggggg cgccgggctt cgcgcggcga tcgaggcggc ggcccgggga gtctccgtcg
     1141 gcctggtctg caagtcgctg cttggcaaag cccacaccgt catggcggaa gggggcgtgg
     1201 cggctgcgct gggcaatgtg gatgagcggg atgggtggga agtgcacgtc accgataccc
     1261 tccggggcgg ccagtacgtc aataactggc ggatggccga gctgcatgcc agggaagcgc
     1321 cggcgcgggt gaaggagctg gaggcctggg gcgccttgtt cgaccgcacg ccggacggcc
     1381 ggatcctgca gcgcaacttc ggaggccatc gctacccccg gctggcgcac gtgggcgacc
     1441 gcaccgggct cgagatgatc cgcactctgc aagaccacgg ggtccaccag ggcatcgacg
     1501 tgcacatgga ggtgacggtc gtcaccctct tcactcgcga gggccgggtc tcaggcgcgc
     1561 tggcgtacga tcgggaacgg ggccgtttcc ggctgttccg ggcccgggcc atcgtgctcg
     1621 cgaccggcgg tatcggccgg gcctactcca tcaccagcaa cagctgggaa tacaccggcg
     1681 acggccacgc cctcgcctac catgcgggcg ccgcgctgca ggacatggag tttctccagt
     1741 tccaccccac cggcatggtg tggcctccca gcgtgcgggg tattctggtc accgaggggg
     1801 tccgggggga gggcggcatt ctggtcaaca accagggacg ccgcttcatg ttcgacgaca
     1861 ttcccgacaa ctacaaaccc cagaccgccg gcacgccgga agaaggctgg cggtatgtga
     1921 tgggcgaccg ggaggcccgc cgcccgcccg agctgctcac ccgcgaccac gtcgcccgct
     1981 gcatcgtcca cgaggtgcgg gaagggcggg gcagccccca cggcggggtg ttcctcgaca
     2041 tcgcgtggat caaggagcgg ctgccgaacg cggcggagca catccgccgc aagctgccca
     2101 gcatgtatca ccagttcaag cagctggccg acatcgacat caccaccacc ccgatggaag
     2161 tgggccccac cacccactac atcatgggcg gggtccgggt cgacggggac agccagatgt
     2221 ccaccctgcc ggggttgttc gccgcggggg aggtggcggc cggtctgcac ggcgccaacc
     2281 ggctgggcgg caactcgctc tcggatctca tcgtgttcgg gaagcgggcc ggcgaatacg
     2341 ccgcggcgtt cgcccaggag catgcggcgc tgacgcctga tccgggtgag gtcacccagg
     2401 cggcaacgga ggcgttggag ccgttcgaac gggccggcgg agagaatccc tacgccattc
     2461 agcacgacct gcaactcatg atgcaggatc tggtgggcat cgtgcggcgc gaggatgaaa
     2521 tgctccgggc ccgggaagag ctcgcggccc tgtggcaccg ggccggaaag gcggcggtcc
     2581 cggggaaccg ggaatacaat cccggatggc acacggccct ggatctcaaa aacctgctca
     2641 ccgtctcgga tgcgctggtg agctcggcgc tcgaacgacg ggagagccgg ggtgggcatt
     2701 tccgagatga ctatcctgag aagcaggcgg aatacggcgg gttcaatctg gtggtgcaga
     2761 aggggcctga tggaaggatg gaggtacgcc gggagccggt ggtgggggtg acggcggcgc
     2821 tcaaggcgtt ggtggagaaa tacaaatgaa ccgttccgcg ttccgggttc caggtaccgg
     2881 gtgcggtgct gcgtgcggtg cctggtgccg cgtgcccggt gcgctccatc ccgagcaccc
     2941 tgcaccgaat ccggcactcg gcaccgaacg ctgcaccgca cgaggaaccc ggaacgcgga
     3001 acccggaacg ggagtgggag ggtggtgatg ggtaaagccg aattcgaaat ctggcgagga
     3061 gagagaggcc aaggagtatt tgtgaagtac ggggtggagg tggaggaggg aatggtcgtc
     3121 ctcgacgccg tccaccagat ccaggccacc caggcccccg acctcgccgt ccgctggaac
     3181 tgcaaggccg ggaaatgcgg ctcctgctcg gccgaggtca acggccatcc ctgcctgatg
     3241 tgtatgactc ggctcagtga ggtcgacctg agcgagccgg ttaccatcga gccgatgcgg
     3301 gcctttcccc atcatcgcga tctggtcacc gatgtgagct ggaatttccg ggtcaagaaa
     3361 cagatccgtc ccttcacgcc ccgaaggccg gacgcgacgg acggaacctg gcggatggaa
     3421 cagcaggacg tggaccgggt gcaggagttc cgcaagtgca tcgagtgttt cctgtgccag
     3481 gatgtatgcc atgtgctgcg ggaccatcac ctgcacgagg agttcgtcgg cccccgctac
     3541 ctggtgtatg ccgcggcgct ggagatgcac ccgctggaca ccctggaccg ccgggaagag
     3601 ctgcgcaagg cgcacggcat cggctactgc aacatcacca agtgctgcac caaggtgtgt
     3661 cccgagaaca tcaccattac cgacaacgcc atcatcccgc tcaaggagcg ggtgatggac
     3721 gacgcattcg atcccatcgt gaagctggtg gggctcatga ccaagaaggt ggcgggacca
     3781 tgaaaacagg gagcaggaag gaggcagcag ggagcaggtc gttctgccct cctcacctcc
     3841 ccgctccccg ctccccgctt cctgcttcct gcttcctgct tcctgcttcc tgctccctgt
     3901 cagttgggag gtaccatgtt cgaattgaaa ccgatcagcg gttccgggat tcccggagcg
     3961 ctcgagaagg ccgaacgcta ccggctgttg aacgagcccg acgcggccga gagcatttgt
     4021 ctcgacgtgc tggacctgga cccggccaat caggaggcgc tggtgatgct gttgctgacg
     4081 cggaccgacc agttcgccgg tgctcacggc gccagcgagg cggcggccaa agaggtgctg
     4141 ccccgcctgg agtcggccta cgaccgcagc tactacgcgg gcctgatcgc cgaacgacgg
     4201 ggcaaggcgc tgttgggggc caactggccc ggcagccaac ccatggcctg gcactgtttc
     4261 cgggaggcca tggactggta cgacaaggct accggtcttc gagctgccgg caacgatgag
     4321 gccttactcc gctggaacac ctgcgcccgg gttctgaacg cccatccaca cctggaaccg
     4381 cggggcgagg tcgagtatca gcccacgctg gatgattgaa tccggtactg aggacagagg
     4441 actgagtgac acgtcggaac tcgtgactcg cgagccctga tccgctatcg tcctaccatg
     4501 cagaaaccca tcgttgccct gctggttctc gcgacgggcg ctgcccccct cgcggcccag
     4561 aagatcgaga acctgcgtaa gctcgaattc atggccgggt gctggcaggc ccagaccggc
     4621 aaggaccaga cggtgcagga gctctggtcc cagcccaacg acagcctgat cctgggcttc
     4681 acccagtatt tcaccaagga gaagcccacc aatttcgatt tcaaccacat ccggcgcacc
     4741 gacagcacgg tgtatctgat cctgagcccc cacggccagc cggccgacac gttccggatc
     4801 aagacgttgg cggacgaggt ggcgtcctgg gaacggggtg gcaccaagtt tcccggactc
     4861 gtcatgtacc gtaaggcgtc cgacggctcg ctgatcgccc ggttggaagc ccccccgacg
     4921 ctggatcagc ccagcgtgga agtccgcttc gagaaaacaa agtgtcccgg ccagaagtga
     4981 ttcgcgggtg accctgatcg ttccgttggc gttcctggcc gtggtcgaca cggccggggt
     5041 cgaatttcgt ggtgtggagg ggcggacccg ggtgccgctg ccgcgcctcg agctggagat
     5101 cacggtcgac ggggtgctgg acgagggcgc ctggcagcag gcgccgcggc tcaccggctt
     5161 ctcccagtac acgccggttg atggccggcc cgccgagcgc aacacggaag tgctggtgtg
     5221 gtattcgcct cacgcgattc atttcggcat ccgggcccac gcccctccgg gcaccatcaa
     5281 ggccacgctg gctgaccggg acaagatctc gggcgacgac ctgatcgaga tcttcctcga
     5341 cacctacaac gacggccgcc aggcgctggt gttcggggtc aacccgctcg gagtccagtc
     5401 ggatggggcg ctgtccgagg gtgcccgccg cagcggtagc gacgcttcgg gcgggcgcga
     5461 gagcaccgac ctgagccccg atttcgtcta tgcctcgaag gggcgcctca ctgaattcgg
     5521 ctatgaggtc gagatccgga tccccttcaa gacgctcaaa taccaggcgg ccgaaccgca
     5581 ggattggcgg ctcaacgtca tccgccgggt caccgccagc gggcacgagg actcgtgggt
     5641 gccggcccgg cgtaccagcc cgacgtttct ggggcaatcc gggacattgc agggtctgtc
     5701 cgggctccgg cggggcctgg tgatggatat caacccggtg atcacggccc acgccaacgg
     5761 cgcgcctgat ccgggcggct ggggctacga ccgggcggtg gagccgggcg gcaatatccg
     5821 gtggggcgtc acctccaacc tcacgctcaa cggcacggtg aaccccgatt tctcgcaagt
     5881 ggaggccgac gccagccagg tggtgaccga tccccgccag gcgacgttct ttcccgagaa
     5941 gcggcccttc tttctggaag gcatcgagca gttcaccacg cctaacaacc tgatctacac
     6001 ccgacgcgtg gtggcgccga tcgcggccac caagctgacg gccaagaccg gaggcaccaa
     6061 cctggcgctg ctgttggcgg cggacgaccg ggagctgtcg gccggcggcg acgacacccc
     6121 gctcttcgcg gtcgtgcggg tccagcgcga tctaggcaag agcgcccgag ccgcgctgat
     6181 ctataccgac cggaccgaag acgccgtcgc caaccgggtc gtaggggcgg acgcgcgggc
     6241 cgtgttcggc ggcatcacgc tggccggcca gctggcgggc agtgccacca cccgggacgg
     6301 ctccaccacc tgggctccgt tgtggcaggc cgatctggcc cggaacgggc gccgcttcgg
     6361 gttgagctac accttccagg gcatcagcga ccagttcacc gccagctccg gcttcatctc
     6421 ccgccggggg atcgtccagc tgggcttcaa ccacgcgctc aacttctatg gccggccggg
     6481 cgggaccttc gagcggacca cgctcggggt caacctgcga ggtcgatggc agtatgccga
     6541 cttcgtgcat gggggcccga tccaggatcg tcagcttttt ctggtcggca atgtccgact
     6601 caggggagga tggttcctgg gcgtcaccgg gatcgcggag cagttcgggt acgatgctcc
     6661 gctgtatcgc gactatgcca tccaacgcta ccagagcggt gtggtggtcg acaccatcgc
     6721 gccctatcca gtcgccccgc cgattcagaa ccgggacctg agcatgacgg cggagtcgcc
     6781 tcgcattgga ccgctccagt tccgggtcaa ttacatcctg ggccgggacg agaacttctt
     6841 cgagtggtcg cccgccaaca tccggatcgt caacgcgacg gtgcagctcc gtcccaccaa
     6901 ccagctgcgg ctggatggga gctacatcca gcagtggtac cagcgccgca gcgaccacac
     6961 cgtggtgggt gagacccaca ttccccggtt gcggctggag tatcaggtga gccgggcggt
     7021 gttcttgcga gccgtggcgg aatacgcctc ccggtccaat gatgatttgc gggacgacgg
     7081 ccgcaccaac gatccgatcc tgatccggga cccggtggat gggatctaca agcgcagcct
     7141 ggcgctggcc aaggaagtga acgacctgcg ggccgacttt ctgttctcct atcagccgct
     7201 tcccggcacg gtgttcttcc tggggtacgg cggcacctac gccgaagacc gtcgcttccg
     7261 gttcgacgag gtggaacggc gggccgacgg gttcttcctc aaggcgagct acctgttccg
     7321 gctctagtca gactctggcg gtccgacttc cactgcacca tatctactga tccccgaacg
     7381 tcggggttgt caaccttgcg caccgttgtt tctactgtgc tcctcctggt ttctgctgcc
     7441 gccctcagag ctcagcctgc ttcggttggg cgacttcggg ggttggtgac ggacgaccgt
     7501 ggaatcccgg tggcctccgc ggaaatagtc gctgtaacca caaatgaaag gacaaggtct
     7561 ggggtcgatg gcgggttcga attcgacgtg gccgctggtt tccagcggtt catggttcga
     7621 gcgattgggt accgaccgta cttcgccaac gcgaacatcg tggaaggaaa gacttccggg
     7681 ctggtcgttg agttgaagtc gctggttcag cggttggacc cggtcagggt ggaggccctg
     7741 cccggcttcg ggggcgcact cgccgatttc gaacgtcggc gggctagtgg cggtggtttc
     7801 tacctgacgg aggcggaaat cgatcgtgcg gcgccgatcg ccgtcagcga cctgcttcgc
     7861 cggcttcccg tcctgcgcgt ggccgatagc ctcggagtac ctcaagccta ctccacccgg
     7921 ggtctgaagc tggtaccgct gggcgggacg atggttgtgg ctccgtgccc catgcgggtg
     7981 gcgctcgacg ggcagctcct cccagccggc accagcctcg acctgctacc tccggctgca
     8041 gtcggaggca ttgaggtcta cgccgggtcc gccacaatcc cggtggagat cgccgccggc
     8101 gctcgagacg tgtcgtgcgg tttgatcgtg atctggagcc gacggggcag gagatgatgc
     8161 agttgttccc cgctgcaacc ttctcgacgc tccccccgtc taattcgacg atccccaaga
     8221 ggaaggtccc gtgttccaca cccgaaacac ccccgcactc ctggccgcac tagccctcgc
     8281 cgcccccctg gccgcgcagg aatcggccca ggaatgggcc cgcgactgcg acgtgggcaa
     8341 cagccggagc gagagctact gcgaagtccg ggaatccacg ctccgcgcca ccggctcgct
     8401 ccgggtcgac gcccagccca acggcggcat ccgggtctac gcctgggacc gcaatgaggt
     8461 gaaggtcgtg gcccgggtcg ccgcctgggc ccggactgag gaagaggcca aagcgctggc
     8521 cggcgaggtg aaggtcgacg ccggcgaacg ggagatccgg tccaccggcc ccgagacccg
     8581 cggccgccgg ggctggtacg tgagttacga catctgggcg ccgagccgca ccgacctgcg
     8641 cctcgcctcc accaatggcg gactcacggt cgaaggcatc tccggccgac tcgatctgga
     8701 aaccaccaac ggtgggattc acctggcctc ggtgggcggg gacgtgaacg ccgagacgac
     8761 caacggcggg atcgacgtga cgctccaagg ccggcgttgg gatggcgaag gcctccgggc
     8821 ccggaccacc aacggcggcg tgcggttgac ggtacccgag gggttcaacg ccgatctcga
     8881 ggcctccacc accaacggcg gtatggactt cgagttcccg gtgacactcc agggccggat
     8941 tcacaagcgc atttccacca aactgggcga cggcggcccg ctcatcagcg tcgcaacgac
     9001 caatgggggg gtaactattc gccggcgcta gcgcgccggc cgggtcgaag agagtcgaag
     9061 acggtcgaag ggtgtctccg caactaccgt cttcgactgc cttcgaccat cttcgaccat
     9121 cttcgacgaa taaccgataa tggccgagcc caggttcgtc cccctcacaa cctggcagga
     9181 atactccccc gacgagatga ccctccgggc ggcccggttc tatcaggaga tcgctcggcg
     9241 tcgcacggta cggcaattct ccgagcggcc ggtcccccgt cagctcatcg agcagtgcct
     9301 gctggccgcg gggaccgcac cgagcggcgc caacctgcag ccctggcatt tcgtggtgat
     9361 ccaggatccc gccgtgaagc gcgagatccg gcaggcggct gagcgggagg agcgcgattt
     9421 ctaccacggg cgggccccgg ccgattggct cgaggccctg gcccctctgg gcaccgacga
     9481 gcacaagcca tatctggaaa cggctccctg gctcatcgcg gtcttcgccg agcgctacgg
     9541 cgtggctccc tcgggggctc ggctctccca ctactacgtc caggaatcgg tcggcatcgc
     9601 gaccggtctg ctgatcgcgg ccctgcatca taccggtctg gtctgcctga cccatactcc
     9661 gagcccaatg gggtttctca atgtggtgct ggagcgcccg gcccacgaga aaccgttctt
     9721 gctgctggtc acgggatacc ctgcggctga cgctcaggta ccggatatca ccaggaaggg
     9781 cctcaatgag attgcgacgt ttcgctgagg gaccgacggg ccgacggacc gacgaccggt
     9841 tactcctctc tttcctcttc tcccttctcc tggccagtcc tgctccagca caggatgctc
     9901 cgcgagactc ccttcccccg cccgtgaccc tcgccgagct tcagggccgg atcgaaagcg
     9961 tgatggcgaa gcataaggtg ccgtcggtgg ggatcgcgct ggtgcaccgc gacagcacgc
    10021 tctgggtggc gggattgggg aaggccgatg tcgccggcgg gaaggccgcc aacgcggaga
    10081 gtctctaccg gatcggatcg acctcgaagg catttgtcgc gctgctgatg gtcctgctgg
    10141 agcagcgggg aaaactcaag ctggacgatc cgatttcgca gtacgctccc gaaatccagt
    10201 tcgagaaccg gtgggaatcg accgacccta tccggatcgt ccacctcctc gagcacacca
    10261 ccggctggga cgatttggcc ctccgggact acgctaacaa cgactcgact ccgcttacgc
    10321 tcagacaggg attggactac accccccgca cccgcacgtc gcgctggcgt ccggggactc
    10381 gggtgtcgta ctgcaattcg gggccgccgg tcgcggccta catcgcggaa aagatcgaag
    10441 gtaagacggt cgaggagctg gtccgggact ggctctttac gccgatcgga atgccgaccg
    10501 ctacctacct gcgcgacccg gccctgcgcg accggatggt caccctctat cacagtgacg
    10561 gtgaaacacc tcacgactac tggcacgtgc tccagcgtcc cgccggttcg atcaacgcgt
    10621 ctccgatcga catggccgcg tacgtccggt tcctgctcaa ccggggggcg gtgaacggac
    10681 ggcagatcct gcccgccacc gccatcgaag ccatggaacg gccccgcagc tccggaacgg
    10741 ccaaggccga tctgccggtc ggctacggtc tccacctcgc cacctatgtc gacagcggtt
    10801 ttgtctggat gggccacgat ggcggcgtgg aaggcggaat caccatgatg gcatatcggc
    10861 cgcagaccgg cctgggcttc gccttcatga tcacctcggg gaacggcgcg gcggtgcagg
    10921 agatcgatct gctggtccgc cgcttcctca cccggggcga gagccggccg gaagggcccc
    10981 cgccggcgcc catgccctcc gaggcccgga cccggggcgg ctggtaccgt cctgacaatc
    11041 cccggtccca gttcacctac ttcctcgagc ggctggtgct cttgacccgg gtcaccgtga
    11101 gcgacagcag cctggtcatg aacccgatcc tgggcgacag caagacgtat ctcccggtgt
    11161 ccgggctcaa gttccgcggt agcgacgagc cggtggcgac gctcgccctt accagcaatc
    11221 ccgaagacgg ccgcgaggcc ggcatcgagc gagtgggtta cttgttgccg gccgagtacc
    11281 accggatctc cactgtgacc gccctgctcg agatcggcct gaccgtcgcc tggatcctcg
    11341 gcatggtgct gaccctggtc ttcgccctga tctggatccc ccgaagactg ctgggccggc
    11401 tcaagaccgt gaagcggatg ggaccgcggc tctggccgct gctggccacc ctctcggtgg
    11461 tcgccttcgt gctgatgttc gtggcgatca gcgaagacct gctgggccag ctcggcgtac
    11521 cgacccgctg gtcatggggc ctgttcatcg ccacactggt cttccccgca gcggcgctcg
    11581 cgggattcgt gtcggcccgt cgggcaaagc cagccgaggc cggtcgcttc gcccgacgac
    11641 tgggactgat cgtctcagtg ctgaacctgg tggccgcggg ctacctggcg tggtggggga
    11701 tcgtcgggtg gcgaagctgg gcctaaacta ctgggagcgg ggagcaggga gcggggagca
    11761 gggagcaggg agcagggagg gggagaccga cgtagactcg catcctcccg ccttgctcgg
    11821 cttcctgctc ccc
//
LOCUS       DASWKS010000542         8264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1041080, whole genome shotgun sequence.
ACCESSION   DASWKS010000542 DASWKS010000000
VERSION     DASWKS010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041080"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /gene="hrcA"
                     /locus_tag="VGA78_15505"
     CDS             <1..1033
                     /gene="hrcA"
                     /locus_tag="VGA78_15505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEX9895334.1"
                     /translation="SADALTERERRVLEAVIHTYIETAEPAGSQTIARRYPLGLSSAS
                     IRSIMSDLEAKGFLYHTHTSAGRIPTDQAYRRYVNDLTRFASPSDHERETIRRELGPD
                     RNAIEEILRRAAQVLGVLTHELGVAAAPRLDAVVLERLDLVHVASERLLLVFHLRSGA
                     VRTIFVQIPASVAAATVEHVTRILNERLAGLTLRDIRASLGERLRDVDGLAQGGELLN
                     IFLAEGDEIFDLSVPPEGVVLGSAELLAGQPEFASNEKMRGLLSLTGRRDVLREALDT
                     RQHAGLSITIGSEHDDARLADFTLVTSSYRLGDLTGVIGVIGPTRMPYDKIIGLVQHT
                     SRLVEGLIT"
     gene            1030..2157
                     /gene="dnaJ"
                     /locus_tag="VGA78_15510"
     CDS             1030..2157
                     /gene="dnaJ"
                     /locus_tag="VGA78_15510"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEX9895335.1"
                     /translation="MRDYYDILSVARTASDDELKRAYRKLAMQYHPDKNGASDAEERF
                     KEIAEAYEVLSDPNTRATYDRYGHAGLSGAGAAGFHHVDLAEALNLFMRDFGGLGGFE
                     SLFGGGRSPTEARRGQDIRVTLRLGLADVASGANRTIKLRTLVQCERCGGSGSAQGTR
                     PVPCGTCNGSGEVRRATRSMFGQFVSVSPCPTCAGEGSIIQSPCELCRGDGRVKGERA
                     VQVEIPPGVSSNNYITLRGQGTAGPRNGPPGDLIVMLEVKDDERFERQGEDLIFDLPV
                     SFSQAALGDGVTIPTPWGEERLQLPAGTQSGTMLKLKGKGLPRLGRSGNGDLHVRVHV
                     WTPEQLSEEQRRLLLELRKLEGEPPRRGAGFWSKLKEALGA"
     gene            2154..2984
                     /locus_tag="VGA78_15515"
     CDS             2154..2984
                     /locus_tag="VGA78_15515"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX9895336.1"
                     /translation="MSWWAVDVRAAPGDRERIAAWLVGESGNTVEERPDGLLVGFALT
                     EPEARALETRLHALFAAEVRVWLRPLESIDWTTRWREGLGPRQLGRLTLVPSWIAPPA
                     DSEVVLTLDPESAFGSGEHGSTRATLTLLERLLRPGQSVVDLGSGSGILAIAAAKLGA
                     GHAFGIEIDSEAIPVAVRNAERNDVTGRVEFLEGDAAKLAPLCAPADLILSNILRGPN
                     IALLPVIRAALAPDGIAIFSGMQRTETELFRPELERSGLKSFDEAIDDGWWAVAARRS
                     "
     gene            2957..3676
                     /locus_tag="VGA78_15520"
     CDS             2957..3676
                     /locus_tag="VGA78_15520"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HEX9895337.1"
                     /translation="MGRGRPAVVITLLAAPGSLAPGREVVLAPEESHHLRVRRSRPGE
                     LVRLVDGGGNLATGHVVGEPSAGRVLIHTVEQRPAPPSLGLAVGAGDRERFAWLVEKA
                     GELGVTDLIPLETEHTAGVGSRVRGDHIEKLQRRALEAIKQSGAAWVPLVHQPLSLAE
                     LAGRYRNGTRWLADAEGLPPAPPPPADPVWIVVGPEGGFSPAERQLLVDEGWMRVRLS
                     AHTLRYETAALAAAVLAGLAR"
     gene            3725..4069
                     /locus_tag="VGA78_15525"
     CDS             3725..4069
                     /locus_tag="VGA78_15525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX9895338.1"
                     /translation="MTDCIFCRIGSGEIPAKLAAKGDGVLAFYDLNPQAPVHLLVIPT
                     RHLSGANAVTALDRIVWSQVMSLAIQVAREQGIADSGYRLVVNQGRDGGQSVEHLHVH
                     VLGGRRMAWPPG"
     gene            4175..4372
                     /gene="rpsU"
                     /locus_tag="VGA78_15530"
     CDS             4175..4372
                     /gene="rpsU"
                     /locus_tag="VGA78_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX9895339.1"
                     /translation="MPEVVIHDDESFERALKRFKKKCEKAGILSDLRKHRHYEKPSEK
                     RKRKMNAAQRKNRRFHRVQHA"
     gene            4428..6905
                     /locus_tag="VGA78_15535"
     CDS             4428..6905
                     /locus_tag="VGA78_15535"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX9895340.1"
                     /translation="MSPTTGQPTDGVLAQNQSAGTPSPFEGVAAPATLATLEFTTALD
                     LVAGHAAGPLGAASVLARRPGADPDRIRADLGLIAEALGLLRHPEGFDIPAVPELGSS
                     LERLRITGSVLEGPDLVVLRRTMTTARLVARELGRVAPRAPAIGALAVEVPGKAIEQR
                     LEQALEDDGELRDNASSGLAHARRAVQAARDKLIRKLEAMLRSADAQAVPQGASVTVR
                     NGRYVIPVRRDSRARPTGIVHDESGTAGTLFIEPAEAIELGNALREALADEAREVLKV
                     LRELTDLVRPHLETIRAAHVMCVAADDLQARARYARASGAEVPALGEVGTLLVLRQAR
                     HPVLLAQAATTVPFDLDLQPGERTLLVSGPNAGGKTVLLKTVGLAAAMLQSGIVPPVG
                     TGSVFPVFTRMLADIGDHQSIAANLSTFSAHVAILRQVLDVADDGTLVLLDEVGSGTD
                     PAEGAALAWASLETLHQRRTLTLATTHLGALKTLASQQRGVVNGSMEFDAATLSPTYR
                     FQKGVPGRSYGLAIARRLGVDPEVVSRAQSQVPEGERALDALLHEVERRDQVLRSRES
                     ELSLELEQTAQRATELSARLTDVEAREKAVRRHERDADSRARSQAREYLLEARKRVEA
                     AIARGEEARSAEEAREARRALEAAVAEMAPRPDGRTAGRTGEQTGGRTDGQRISAGRR
                     VRLGTGTLCQVASVRDDGKLVVTAGNVRMVVPEDSVVEVLAEEKAGRPSSPSVRPSVG
                     PSVDAPFEIDLRGFSVDTAEAATVSAIDGAVLADHPFLRIIHGKGTGAVRAKVHELLK
                     QDRRVARFALAPTNQGGAGATIAEFRR"
     gene            6902..>8264
                     /gene="dnaG"
                     /locus_tag="VGA78_15540"
     CDS             6902..>8264
                     /gene="dnaG"
                     /locus_tag="VGA78_15540"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX9895341.1"
                     /translation="MSMIPDEIIEQVRDGADLVGIVGETVALKRTGTDYRGPCPFHGG
                     KGRNFAVIPKKGLYYCFVCHEGGDVFTWFRKHFGMDYPTAVREVARRVGVVIPENGPR
                     QGPDPREPLFGAVAVAQEFFARQLMESAEAEPARLYLGSRLVTLEQAGELGLGHAPRG
                     NAFLDEMRKLGIDQPVLLEAGLVHQRDDGSVAARFRGRLLFPIHDLRGRVVGFGGRLL
                     GPGEPKYLNSPETPVFHKGSQLYHLHLAKGAIRKEETVIVVEGYFDVIRLTLAGIEHV
                     VAPLGTALTEGQAQVLRRFAKTAILLFDSDRAGLRATFRTGDELLRHGIRVRVASMPP
                     GEDPDTLVQKGGAAALQPLLRDAMDVLERKLLLLEQHGWFEDVSKRRDALDRILPTLR
                     AASDAMVRDLYIGRVAERVGVSRETLERELRERPTVPPSGRGGEPASTPFDRLRPPST
                     AVAP"
BASE COUNT         1281 a         2744 c         2956 g         1283 t
ORIGIN      
        1 gtcggccgac gccctgaccg aacgcgagcg acgcgtgctc gaggcggtca ttcatacgta
       61 tatcgagacg gcggagcccg ccgggagtca gaccattgcc cggcgttacc cactgggcct
      121 ctcgtctgcc tcgatccgct ccatcatgag cgacctcgag gccaagggat tcctgtacca
      181 tacccatacg tccgccggcc ggattccgac cgatcaggcc taccgtcgtt acgtgaacga
      241 cctcacccgg ttcgcctcgc ccagcgacca cgagcgggaa accattcgcc gggagctggg
      301 ccccgaccgc aatgcgatcg aggagattct gcgccgcgcc gcccaggtcc tcggtgtgct
      361 gacccacgag ttgggtgtgg ctgcggcgcc ccggctcgac gccgtggtgc tggaacggct
      421 cgatctggtg cacgtggcgt cggagcggct gctcctggtc ttccatctga gaagcggcgc
      481 ggtccggacc atcttcgttc agattcccgc cagcgttgct gccgccaccg tcgagcacgt
      541 gacccggatt ctcaacgagc ggctggccgg gctcacgctg cgggacatcc gcgcctccct
      601 gggagagcgg ttgcgggacg tggacgggct ggctcagggg ggcgagctgc tgaacatctt
      661 tctggcggag ggcgatgaga tcttcgatct ctcggtgcca cccgaagggg tggtcctggg
      721 gagcgccgaa ctgctggcgg gccagcccga attcgcctcc aatgagaaga tgcgcggcct
      781 cttgagtctc accggccggc gcgacgtgtt gcgggaagcg ctggacaccc gccagcacgc
      841 gggcctttcc atcaccatcg gttcggagca cgacgatgcc cggctggcgg acttcacact
      901 ggtaacgtca tcctatcggt tgggtgactt gaccggggtc atcggcgtga tcggtcccac
      961 ccggatgccg tacgacaaga tcatcggcct ggtccagcat accagtcggc tggtggaggg
     1021 gctgatcacg tgagggatta ctacgacatc ctgagcgtcg cgcgcaccgc ctcggacgac
     1081 gaactcaagc gggcctaccg caagctcgcc atgcagtacc atcccgacaa gaacggggcg
     1141 agcgacgctg aggagcggtt caaggagatc gccgaggcct acgaggtcct gagcgatccc
     1201 aacacccgcg ccacctacga tcgctacggc catgccgggt tgagcggggc cggcgctgcc
     1261 ggatttcacc atgtggatct ggccgaagcg ctcaacctct tcatgcgcga tttcggcggt
     1321 ctaggcgggt tcgagagcct tttcggcggc ggccgctccc ccaccgaggc ccggcgcggt
     1381 caggacatcc gggtgacgct gcggctggga ctggcggacg tcgcgtcggg ggcaaatcgc
     1441 accatcaagc tgcgcactct ggtgcagtgc gagcgctgcg gcgggtcggg atcggcccag
     1501 ggtacccggc cggtgccctg tggcacctgc aacggcagcg gcgaggtgcg ccgggccacc
     1561 cgcagcatgt tcggccagtt cgtatcggtc tcaccctgtc ccacctgtgc cggcgagggg
     1621 tcgatcatcc agtcgccctg cgagctctgc cggggcgacg gccgggtcaa gggcgaacgc
     1681 gcggtccagg tcgagattcc gcccggggtg tcgagcaaca actacatcac gctccgggga
     1741 caggggacgg ccggcccgcg caacggaccg ccgggcgacc tgatcgtcat gctggaggtc
     1801 aaggacgacg agcggttcga gcggcaaggc gaagatctga tcttcgatct gccggtgtcc
     1861 ttctcgcagg cggcgttagg cgacggcgtc accatcccca caccctgggg tgaagagcgg
     1921 ctccagctcc cggccgggac ccagtcgggt acgatgctca agctcaaggg gaagggactg
     1981 ccgcgcctgg gccggagcgg caacggcgac ctgcacgtgc gggtccacgt gtggactccc
     2041 gagcagttga gcgaggaaca gcgtcgcctg ctgctggagt tgcgcaagct ggaaggtgag
     2101 ccgccccggc gcggcgccgg attctggagc aagctcaagg aagccctggg cgcatgagct
     2161 ggtgggccgt ggacgtccgc gcggccccgg gtgaccgtga gcgaatagcg gcctggctgg
     2221 tgggtgaaag cggcaacacc gtggaggagc gccccgacgg tctgctggtg gggtttgccc
     2281 tcaccgagcc cgaagcccgc gcgctcgaga ctcggctgca cgcattgttc gccgccgagg
     2341 tgcgggtctg gctccggccg ctggaatcga tcgattggac cacccggtgg cgggagggac
     2401 tgggccccag acaactgggc cgcctgaccc tggtccccag ctggattgct ccgccggcgg
     2461 actcggaagt cgttctcacc ctcgatccgg aatccgcctt cgggagcggg gagcacggat
     2521 ccacccgggc gacgctgacc ctgctggaac gcctgctccg gcccggccag agtgtcgtcg
     2581 acctgggctc aggcagcggc atcctggcca tcgcggccgc gaagctcggc gctgggcacg
     2641 ccttcggtat cgagatcgat tcggaagcca ttcccgtcgc ggtccgcaat gccgaacgca
     2701 acgacgtcac cggccgggtg gagttcctgg aaggcgacgc cgccaaactg gccccgttat
     2761 gcgcgccggc cgatctgatc ctgtccaaca tcctgcgggg gcccaacatc gctctgctgc
     2821 cggtgatccg ggccgcgctc gcccccgacg gcatcgccat cttctcgggc atgcagcgca
     2881 ccgagacgga gttgttccgt cccgagctgg agcggagcgg cctgaagagc tttgacgaag
     2941 cgatcgacga tggctggtgg gccgtggccg cccggcggtc gtgatcacgc tgttggcggc
     3001 cccgggatca ctcgcccccg gtcgggaggt ggtgctggca ccggaggaaa gccaccacct
     3061 ccgggtccgc cggagccgtc ccggcgagct ggtcaggctg gtggacggcg ggggaaatct
     3121 cgcgaccggc cacgtggtgg gcgagccgag cgccggccgg gtgctgattc acactgtcga
     3181 gcagcggccg gcccccccga gcctggggct ggcggttggc gcgggcgacc gggaacggtt
     3241 cgcctggctg gtcgaaaagg ccggcgaact gggggtcacc gatctgatcc cgctcgagac
     3301 cgagcatacc gcgggtgtcg gctcgcgggt gcgcggcgac catatcgaaa agctgcagcg
     3361 ccgcgccctg gaagccatca agcagtccgg ggccgcctgg gtccccctgg tccatcagcc
     3421 gctctccctg gcggagctgg caggccggta ccgaaatgga acccgttggt tggccgatgc
     3481 cgagggtttg ccgcccgctc cgccgccccc cgccgatccg gtctggatag tggtgggacc
     3541 cgagggaggg ttcagcccgg cggaacgcca actcctggtg gatgaaggct ggatgcgggt
     3601 gcggttgagt gcgcatacac ttcggtacga aaccgccgcg ctcgcggcgg cggtgctggc
     3661 cgggctcgct cgatagctgc agcagaacga ccgacgccgt cgcgtcccgc gactcgagac
     3721 cctcatgacc gactgcatct tctgccggat cggctccggc gaaattccgg cgaagctggc
     3781 cgcaaagggc gacggggttc tggcctttta cgatctcaac cctcaggcac cggtccattt
     3841 gctggttatt cccacccgcc atctgagtgg agccaatgcg gtcaccgccc tggaccggat
     3901 cgtctggagc caggtgatgt cgctcgcgat ccaggtggcg cgcgagcagg gcatcgcgga
     3961 ttcgggctac cgattggtgg tgaaccaggg gcgcgatggg ggtcaatcgg tcgagcactt
     4021 gcatgtgcac gtgctgggcg gtcggcggat ggcctggccg ccgggctgat ccggcgcgaa
     4081 gcctcagctt gaccccaccc tcgaagccgc taagttacta gtctgtcttg gtttcgcccg
     4141 accccgtcgg gccggagagg ggtgataagt cgcaatgccg gaagtcgtca ttcacgatga
     4201 cgagagcttt gagcgtgccc tcaagcgctt caagaagaag tgtgagaagg cgggaatcct
     4261 ctctgatctg cggaaacatc gtcactacga gaaacccagc gagaagcgca agcgcaagat
     4321 gaacgccgcc cagcggaaga atcggcgctt tcatcgggta cagcacgcgt gaccttgcat
     4381 gacctctggt ccctcctccc gatcgctccg cccatggggg tgaaggggtg agcccgacca
     4441 ccgggcaacc gaccgacggg gtgctggcgc agaaccagag cgccggcacc ccgtcccctt
     4501 ttgagggggt ggcagctccc gccaccctcg ccaccctcga attcaccacc gcgttggatc
     4561 tggtcgccgg ccatgccgcc ggaccattgg gcgcggcctc cgtcctggcc cgccggccgg
     4621 gggccgatcc cgatcggatc cgggccgacc tgggtctcat cgccgaggct ctgggcttgc
     4681 tgcgtcatcc cgaaggcttc gatatcccgg cggttcccga actgggctcg tcgctggagc
     4741 ggctccggat cacgggcagc gttctggaag ggcccgacct ggtggtcctg cgccggacca
     4801 tgacgacggc gcggctggtg gcgcgggagc tgggccgcgt ggccccgcga gcgcccgcga
     4861 tcggcgccct ggccgtcgag gtccccggca aggccatcga gcaacgtctg gagcaggccc
     4921 tggaagacga cggtgagttg cgggacaacg ccagctccgg gctggcccac gccaggcggg
     4981 cggtgcaagc tgcgcgggac aagctgatcc ggaagctcga ggccatgctg cggtctgccg
     5041 acgctcaggc tgtgccgcaa ggcgcttcgg tgacggtccg gaacgggcga tacgtgatcc
     5101 cggtccgccg cgactcgcgg gcccgcccga ccggaatcgt gcacgacgag tccggcacgg
     5161 cgggcaccct gttcatcgag ccggccgagg cgatcgagct gggcaacgcg ttgcgcgaag
     5221 cgctggccga cgaggcccgc gaagtgctca aggtgctgcg cgagctgacc gacctggtgc
     5281 gcccccacct cgagaccatc cgggcggcgc acgtgatgtg cgtcgccgcc gatgacctgc
     5341 aggccagggc ccgctatgcc cgggccagcg gggccgaagt gcccgcgctc ggcgaagtgg
     5401 gcacgctgct ggtgctgcgc caggcgcgtc acccggtgct gctggcccag gccgccacca
     5461 cagtcccatt cgatctggac ctccagcccg gcgaacgcac gctgctggtc agtggcccca
     5521 acgccggcgg caagacggtg ctgctcaaga ccgtggggct ggctgcggca atgctgcagt
     5581 cagggatcgt cccgccggtg gggaccggca gtgtgtttcc ggtattcacc cggatgctgg
     5641 cggacatcgg cgatcatcag tcgatcgcgg ccaacctctc caccttcagc gcccatgtgg
     5701 cgatcctgcg ccaggtcctc gacgtggccg acgacggcac cctggtgctg ctggatgagg
     5761 tgggcagtgg gaccgatccg gccgagggtg cggcgctcgc gtgggcctcc ttggagaccc
     5821 tgcaccaacg ccgcaccctg accctggcga cgactcatct gggcgcgctc aagaccctcg
     5881 cgtcccagca aaggggcgtg gtgaacggct ccatggagtt cgatgccgcg accctctcgc
     5941 ccacttatcg ttttcaaaag ggcgttccgg gccggtccta cgggctcgcg atcgcgcggc
     6001 gtctgggcgt ggatcccgag gtagtctcgc gggcccagtc ccaggtgccg gagggcgagc
     6061 gggcgctcga cgccctgctg cacgaggtgg aacggcgcga ccaggtactg cggagccgcg
     6121 agtccgagct gtcgctcgag ctggagcaga ctgcccagcg tgcgaccgaa ctcagcgcca
     6181 ggctgaccga cgtcgaggcc cgggagaagg cagtgcgccg ccacgagcgc gacgccgact
     6241 cgcgagcccg ctcgcaggcc cgggaatacc tgctggaggc gcggaagcgg gtcgaggccg
     6301 ccatcgcgcg gggcgaagag gcgcgcagcg cggaggaggc cagggaggcc cgacgggcgc
     6361 tggaagctgc ggtggcggaa atggcgccgc ggccggacgg ccggacggcc ggacggacag
     6421 gcgaacagac gggcggacgg accgacggac agcgaatctc ggccggcagg cgagtaaggc
     6481 tgggtaccgg gactttgtgt caggtggctt cggttcggga tgatggcaag ctggtggtca
     6541 ccgctggaaa cgtgcgaatg gtcgtgccgg aggacagtgt ggtggaagtc ctggccgagg
     6601 agaaggcggg ccgtccgtcc agtccgtccg tccgtccgtc cgtcggtccg tcggtcgacg
     6661 cccctttcga gatcgacctg cgtgggttca gcgtcgacac cgctgaggcc gccaccgtct
     6721 cggcgatcga tggcgcggtg ctggccgatc atccgttcct acgcatcatc catggcaagg
     6781 gcaccggcgc ggtgcgcgcc aaggttcacg agctgctcaa gcaggaccgg cgggtggccc
     6841 gtttcgccct cgcccccacc aatcagggcg gcgccggcgc caccatcgcg gagttccgcc
     6901 gatgagcatg atccccgacg agatcatcga gcaggtccgc gacggcgcgg atctggtcgg
     6961 gatcgtcgga gagaccgtcg ccctcaagcg caccggcacg gactaccgcg ggccctgtcc
     7021 cttccacggc ggcaagggtc gcaacttcgc cgtgattccc aagaagggac tctactactg
     7081 cttcgtgtgc catgaaggcg gcgacgtctt cacctggttc cggaagcatt tcgggatgga
     7141 ctacccgacc gcggtgcggg aagtggctcg gcgggtgggt gtggtgatcc ccgaaaacgg
     7201 accgcgccag ggccccgatc cgcgtgagcc actgttcggc gcggtggcgg tggcccagga
     7261 gttcttcgcc cggcaactga tggagagcgc cgaggcagag ccggcgcggc tgtacctcgg
     7321 atcccgcctg gtcacgctgg aacaggccgg tgagctgggt ctgggccacg cgccgcgcgg
     7381 caacgccttt ctggacgaga tgcggaagct cgggatcgac cagccggtgc tgctggaggc
     7441 ggggctggtc caccagcggg acgacggatc ggtggcggcg cgcttccgcg gccggctgct
     7501 ctttccgatc cacgatctgc ggggacgggt ggtgggtttc ggcggccgcc tgctgggacc
     7561 gggggagccc aaatacctga actcgcctga gacgccggtc ttccacaagg gatcgcagct
     7621 ctaccatctg catctggcca agggtgcgat ccgtaaggaa gagaccgtga tcgtggtcga
     7681 gggatacttc gacgtgattc gtttgactct ggccgggatc gaacacgtgg tggcgccgct
     7741 cggcacggcg ctgaccgagg gccaggccca ggtgctgcga cgcttcgcca agaccgccat
     7801 cctgctcttc gacagcgacc gggccggact gcgggccacc ttccggaccg gcgacgagct
     7861 gctgcggcat ggcatccgag tccgggtggc ttcgatgcct ccgggcgaag atcccgatac
     7921 gctggtgcag aagggtggcg ccgccgcctt gcagccgctg ctgcgcgacg cgatggacgt
     7981 gttggagcgc aagctgcttc tgctggagca gcatggctgg ttcgaggacg tgtccaagcg
     8041 gcgggacgcg ttggaccgga ttctccccac cctccgcgcc gccagcgacg caatggtgcg
     8101 cgatctctac attggccggg tagccgagcg agtcggtgtc tcgcgtgaga ccctggagcg
     8161 agagctgcgg gaacgcccca ctgtgccgcc gtcagggcgg ggcggggaac ccgcttcgac
     8221 ccccttcgac cgccttcgac cgccttcgac cgccgtagcg ccgg
//
LOCUS       DASWKS010000543         1513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_291059, whole genome shotgun sequence.
ACCESSION   DASWKS010000543 DASWKS010000000
VERSION     DASWKS010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291059"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VGA78_15545"
     CDS             complement(<1..716)
                     /locus_tag="VGA78_15545"
                     /inference="COORDINATES: protein motif:HMM:NF014750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX9895342.1"
                     /translation="MQPILTVDLSTEKTGHLNIPRQWEQDYLGGASLAARILYDRLVP
                     CLDPLAPEAPLLFFTGPLTGTAGPAVGRFVVCGRSPATGLWGESNCGGFWGPELRMAG
                     FDGLLVTGRAPEPVYLWIQEGQVELRPADLFWGLDTYQAQSAIQAELGVRTARVATIG
                     RAGEALIPFALILCDHGRVAGRTGMGAVMGSKNLKAVAVKGRGKVPVVDPQRYAPLRA
                     DSNRTLRAEPVSRVLHDLGSG"
     gene            complement(726..>1513)
                     /locus_tag="VGA78_15550"
     CDS             complement(726..>1513)
                     /locus_tag="VGA78_15550"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEX9895343.1"
                     /translation="PVGRGLHRRLDGGDWRPVGQLNRESGVVVLISADAEWRAVRSLY
                     PDATVCMSPMGEWFESGWDSPGNGFATRKPGSSRVRFFHGGWGKIAAAASTQYVIDRW
                     KPNLLINLGTCGGFEGEIERGTVILVERAIVYDIYEQMGDSAEHLAHYSTCIDLSWLG
                     EDIPGGVRRALLVSGDRDLFPADIPGLKARFGAIAGDWESGAIAYVAACNEVRCLILR
                     GVTDLVGEQGGEAYGDPEFFAGAAEEVMARLVAALPEWLARVI"
BASE COUNT          278 a          542 c          449 g          244 t
ORIGIN      
        1 ccggacccca ggtcgtgcag cacccgggaa accggttcgg ccctcaaggt acggttcgaa
       61 tcggcgcgca gcggcgcgta ccgttgcggg tctacaaccg gcaccttgcc ccggcctttt
      121 acggccaccg ctttcaggtt cttggagccc atgaccgcgc ccatccccgt ccgccccgcc
      181 acccggccgt ggtcgcacaa gatcaaagcg aaggggatca gcgcctcgcc ggcccgccca
      241 atagtcgcca cccgggcagt cctcacaccc agttcggcct ggatggcgga ttgggcctgg
      301 tacgtgtcca ggccccagaa aaggtctgcc gggcgcagct ccacctgtcc ttcctggatc
      361 cacaggtaaa cgggctccgg agccctgccg gtcaccagca ggccgtcgaa cccggccatg
      421 cgcagctccg ggccccagaa cccgccacag ttcgattcgc cccatagccc ggtcgcaggc
      481 gagcgcccgc agacgacgaa gcgaccgacg gccgggccgg cagtcccggt aagtggcccg
      541 gtgaagaaga gcagcggcgc ttcgggcgcc aacgggtcca ggcaaggcac caagcgatcg
      601 tataagattc gcgccgcaag ggaggcccca cccaggtagt cttgctccca ctgtctgggg
      661 atatttaggt gcccggtttt ctcggtgctg agatcgaccg tgaggatcgg ctgcatcgtt
      721 ttctcctaga tgacccgagc cagccactcg ggcagggctg ccaccagccg ggccatgact
      781 tcctcggcag cgccggcgaa aaactccggg tccccgtagg cctcgccacc ctgctccccg
      841 accaggtcgg tgactcccct caagatcagg cagcgaacct cgttgcacgc tgccacgtaa
      901 gcgatcgcac cggattccca atccccggcg atggctccaa agcgagcttt caggccaggg
      961 atatcggccg ggaacaagtc ccggtcgccg gagaccagca gcgcccgccg cactccgcct
     1021 gggatatctt cacccaacca ggacaggtcg atgcaggtac tgtaatgagc caggtgttcg
     1081 gcggagtcgc ccatctgctc gtagatgtcg tagacgattg cccgctcgac caggatgacg
     1141 gtcccccgtt cgatctcccc ttcgaagccg ccgcaggtgc cgagattgat caaaagattt
     1201 ggcttccagc ggtcgatcac gtactgggtg gaagccgccg cagcgatctt cccccagccg
     1261 ccgtggaaga accgtacccg gctggatccg ggttttctcg tagcgaaccc atttccgggc
     1321 gagtcccatc cggattcgaa ccactcaccc atgggtgaca tgcacaccgt cgcatcggga
     1381 tacaatgagc gtaccgcgcg ccactcggcg tccgccgaga tgagtaccac gacaccggat
     1441 tcccggttca gctggcccac aggcctccag tctccgccat ccaatcggcg atgcagtcca
     1501 cggcccacgg gat
//
LOCUS       DASWKS010000544         3126 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1792917, whole genome shotgun sequence.
ACCESSION   DASWKS010000544 DASWKS010000000
VERSION     DASWKS010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1792917"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1102
                     /locus_tag="VGA78_15555"
     CDS             <1..1102
                     /locus_tag="VGA78_15555"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9895344.1"
                     /translation="FPQPTCRPDSSFRSYALPETWQSLQNERRLANQAWQQRLTRTGQ
                     TARALPLRLEAAGARGVVTSLWSQGWGVNKIFNARTRSIPTIDLSCEDYGLVYRLTEN
                     NQGPVLRVTADAEFQGDNVPVFNTIAEVRGSANPDEFVMLSAHFDSWDGSSGATDNGT
                     GTITMLEAMRILRQVYPNPKRTILVGHWSGEEQGLIGSRAFTEDHPEVVRGLQALFNQ
                     DNGTGRVVNFSAAGLTNAGQYLAKWLSRLPMEITRNINLQLPGNPAGGGSDNASFICH
                     GAPGLGLGSLNWEYGTYTWHTNRDTYDKVVPDELKNNVVLTAMLVYLASEEPDKLPRE
                     RRIMGPGRQNPNAAPTWPSCQKPARSIGEWQR"
     gene            1357..2604
                     /locus_tag="VGA78_15560"
     CDS             1357..2604
                     /locus_tag="VGA78_15560"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX9895345.1"
                     /translation="MDIRREKPKSIKKPVIIGAGVLAVAVVTVLLGQLKPAAPSVDAG
                     TLYTDSVVRGPMVREVRGPGSLTPEQIRFITAVTAGRVEKRHLRPPAEVTSETVILEL
                     TNPDVEIQVLNADRQLADAEAALVSLRTNLRTGYLSQASSVEDIRQQFLDAKRRAEAG
                     EELLKKGLIIPLDQKQAADRARSLEQRLAHEEQRLELLRSTIDEQITAQQSQVKRLQS
                     ISDFQHQLRASMVVRAGTTGILQEVPLEIGQYAQPGALLARVIPTPIDLKAVLRIPET
                     QARDLAIGQVAEIDTRNGKVKGHVVRVDPSITNGTITVDVAIDGELPAGARPDLSVDG
                     VIELERLPDVLSVGRPAYAQERSTITLFKLTPDRGEAIRVQVRVGRLSVRDVEILGGL
                     EPGDIIILSDMSRYENVERVRLK"
     gene            2702..>3126
                     /locus_tag="VGA78_15565"
     CDS             2702..>3126
                     /locus_tag="VGA78_15565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9895346.1"
                     /translation="MSGDPGLITLEGITKVYYTEELETHALSDVHLQIAQGEFVAVSG
                     PSGCGKTTMLSLLGLLDTPTSGTYTLAGQPVAGLNAAERARVRNRQIGFIFQAFNLIG
                     DLTVYENVELPLTYRGMPSAERQKRVQAALERVEMAHRM"
BASE COUNT          582 a         1007 c         1039 g          498 t
ORIGIN      
        1 tttcccccag ccgacctgcc gtcccgactc gagctttcgc tcgtatgccc tgccggagac
       61 ctggcagagc ctgcagaacg agcgtcggtt ggccaatcag gcatggcagc agcggctgac
      121 ccgaaccggc cagaccgccc gggcgctacc gcttcggctc gaggccgcag gtgcgcgcgg
      181 cgtggtcacc agcttgtggt cccagggctg gggcgtcaac aaaatcttca acgcccggac
      241 ccgttccatt cccaccatcg atctgagctg cgaggactac ggactggtct accggctcac
      301 cgagaacaac cagggcccgg tgctgcgggt gacggccgac gccgagtttc agggcgacaa
      361 tgtgccggtc ttcaacacca tcgccgaggt ccggggcagc gccaacccgg acgagttcgt
      421 gatgctctcg gcccacttcg attcgtggga tgggtccagc ggtgccaccg acaatggcac
      481 cggcaccatc accatgctgg aggcgatgcg gattctccgg caggtgtatc ccaatcccaa
      541 gcggaccatt ctggtggggc attggagcgg cgaagagcag ggtctgatcg gctcccgcgc
      601 cttcaccgag gatcaccccg aggtggtgcg gggactgcag gccctcttca accaggacaa
      661 cggcaccggc cgagtggtga acttcagcgc cgccggtctc accaatgccg gccagtatct
      721 tgccaagtgg ctatcccgcc tcccgatgga gatcacccgg aacatcaacc tgcagctgcc
      781 gggcaaccca gccggcggcg ggtcggacaa cgcctcattt atctgccatg gtgccccggg
      841 tctggggctg ggatcgttga attgggagta cgggacctac acctggcata ccaatcggga
      901 cacctacgac aaggtggtgc ccgatgaact caagaacaac gtggtgctga cggcgatgct
      961 ggtgtacctc gcgtcggagg aaccggacaa gttgccgcgc gaacggcgga tcatgggccc
     1021 cggccggcag aacccgaatg cggcccccac ctggccttcg tgtcagaagc ccgcccggtc
     1081 gattggggag tggcagcgat aggagggacg gactgacgga ctgacggact gacgggcggt
     1141 tctgcgggac cgccctttcc tttccctatc tcgaacaccg gttttcccga atctgggaat
     1201 aacggcagaa caagctcctg agtcgtaaag tggaagtgct gtgatggctt caggttacaa
     1261 ggcaagacca ccggaggaaa ggcggcacgg aattcccata gaggtaaggc atgctgaaac
     1321 cgtccgcccg tccgcccgtc cgcccgtccg cctgatatgg atatcaggcg cgagaagccc
     1381 aagtcgatca agaagccggt gatcatcggc gccggcgtgc tggctgtggc cgtggtgacg
     1441 gtgctgctgg gccagctcaa gcctgccgct ccctcggtcg atgccggcac gctctatacc
     1501 gattcggtgg ttcgtggtcc catggtgcga gaagtgcgcg gtcccggcag cctgacgccg
     1561 gagcagatcc ggttcatcac cgccgtgacg gcgggccggg tagagaagcg gcacctgcgt
     1621 ccgccagccg aggtcacctc cgagaccgtg atcctggagc tgaccaatcc ggacgtggag
     1681 atccaggtcc tgaatgccga ccgccagctg gccgatgcag aggcggccct ggtctcactc
     1741 cggaccaacc tcagaaccgg gtatctcagc caggcgagct cggtggagga catccggcag
     1801 cagtttctcg atgccaagcg ccgggccgag gcgggtgagg agctgctgaa gaaggggctg
     1861 atcatccctc tggatcagaa gcaggcggcg gatcgggccc ggtcgctgga acaacggctg
     1921 gcccatgaag agcagcgcct ggagctgctc cggagcacca tcgacgagca gatcacggcc
     1981 cagcaatccc aggtcaagcg gctccagtcg atttcggact tccagcatca gctccgggcc
     2041 tcgatggtgg tgcgggcggg cacgaccggc attctccagg aggttccgtt ggagatcggg
     2101 cagtacgctc aaccgggcgc gctcctggcc cgggtgatcc ctaccccgat cgacctcaag
     2161 gccgtgctcc ggatccccga gacccaggcg cgcgacctcg ccatcggcca ggtggccgag
     2221 atcgatacgc gaaacggaaa ggtgaagggc cacgtcgtac gggtggatcc gtccattacc
     2281 aacggcacca tcaccgtcga cgtggcgatc gacggcgagc tgccggcggg ggcccggccg
     2341 gatctgagcg tcgacggggt gatcgagctc gagcggttgc cagacgtgct gagtgtgggc
     2401 cggccggcgt acgcgcagga gcggagcacc atcacgctct tcaagctgac gcccgaccgc
     2461 ggcgaggcga tccgggtcca ggtgcgggtc ggccggctgt cggtccgcga cgtggagatc
     2521 ctgggcggac tggaaccggg tgacatcatc atcctgagcg acatgtcccg atacgaaaac
     2581 gtggaacgcg tccggctgaa ataagtcgcg agtcacgagt cacgagtccc gccgactcgt
     2641 ggcgcgacga accctttcgc ggctcgcgac tcgcgattcg cgaccaatac aggagacccc
     2701 gatgagcggc gatcccggat tgatcacact ggaaggcatt accaaggttt actacaccga
     2761 ggagctggag acccacgcgc tctccgacgt ccacctgcag atcgcgcagg gtgagttcgt
     2821 cgcggtgtcc ggtccgtccg gctgcggcaa gaccacgatg ctctcgctgc tgggtctcct
     2881 ggatacaccg acctcgggga cctacaccct ggcgggacag ccggtggcgg gcctcaacgc
     2941 ggcggagcgg gcccgggttc gcaaccggca gatcggattc atcttccagg ccttcaatct
     3001 gatcggcgac cttacggtct acgagaacgt ggagctgccc ctcacctacc gcggcatgcc
     3061 ctccgcggaa cgccagaagc gggtgcaggc cgcgctggag cgggtggaga tggcccaccg
     3121 gatgaa
//
LOCUS       DASWKS010000545         5265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1044282, whole genome shotgun sequence.
ACCESSION   DASWKS010000545 DASWKS010000000
VERSION     DASWKS010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5265
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044282"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VGA78_15570"
     CDS             <1..373
                     /locus_tag="VGA78_15570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895347.1"
                     /translation="LGGGPWPVLGFVLLHNAVRLALAPWLLSLGWEHGAKVGHALAQS
                     PLPRASVLAEEAAAFAGALAIPLVARRYLDAVSLEATVGVIGLLLAVVLLRRKALPGV
                     SPLSLTLLVGAGALLWHWGLG"
     gene            370..636
                     /locus_tag="VGA78_15575"
     CDS             370..636
                     /locus_tag="VGA78_15575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX9895348.1"
                     /translation="MIERTVMVINSLGLHARPAAQLVRLASSFQSQIELAKDDLSVNA
                     KSIMGVMMLAAECGSSLTIRANGNDAEPAVQALSELVTGGFGES"
     gene            633..2426
                     /gene="ptsP"
                     /locus_tag="VGA78_15580"
     CDS             633..2426
                     /gene="ptsP"
                     /locus_tag="VGA78_15580"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEX9895349.1"
                     /translation="MSERVLHGIGVSPGVAYGPALVVDWRFPDVPDRGIGPEQVEAEI
                     ARLRAAVEQVVDHLEQLRERVRERAGAEESNIFEAQILMARDPEFLGACEHLIRKNLL
                     SAETAYEFKALEVRVSWAGTANVRLRERLADLSAVQIRMLRVLVGDRDDELEISQPDG
                     PVIIVAHELSPGLTVQLDRDRLAGLVSEEGTRTSHAAILAHSLGIPAVMGVRDALARV
                     RTGTVLLINGASGAVLLDPDPADLREASTQVSRRRKLELEIEAVADQPSVTPDGQKIR
                     LMANVDLPEEIDLAVRSGAEGVGLVRTEFLLTGRTALPGENDQADYFRRVATAFPNHP
                     VTIRTFDLGGDKFPVAFDSPMEANPFLGWRSIRVCLDQPEVFRPQLRALLRAAVHGNV
                     RVMLPLVTRVDEILVTRDMLAEEALSLQRAGVPAARSLPLGAMMETPAAAVIADRLAL
                     VCDFFSVGTNDLTQYTMAVDRGNARLASRFTPQDPAVVRLLKQVLDAAAARGIECGVC
                     GEMASEPLTAVLLMGLGYTTLSVAPPTLHLMKWLIQRIPYQACRNAASEALDADSPAD
                     VDAILKRHVAPHVDVHLLDPHGPLPARGARA"
     gene            2490..3698
                     /gene="metK"
                     /locus_tag="VGA78_15585"
     CDS             2490..3698
                     /gene="metK"
                     /locus_tag="VGA78_15585"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX9895350.1"
                     /translation="MRASNRHVFTSESVTEGHPDKVADQISDAVLDSILARDPAARVA
                     CETLVTTGMAVVAGEITTRTYVHIPDIVRETVRRIGYTDASYGFDAQTCAVLTSIDRQ
                     SPDIAMGVDRDGAGDQGMMFGYATDETPERMPLPLMLAHRLVQRLAAVRKGLDGLEQI
                     AWLRPDGKSQVSVEYDDGTPIRVATVVVSTQHAESVRGRRLSQRKLKEAVTEHVIQPV
                     LRHAELDGRRTRILINPTGRFVIGGPHGDAGLTGRKIIVDTYGGMARHGGGAFSGKDP
                     SKVDRSAAYAARWVARNIVDARLARRCEVQVAYAIGVAEPVSVLVHTFGTGKLPDPVL
                     ERAVREVFDLTPKGIIRALHLRSPIYQATAAYGHFGRKPHAATVQGKRVRLFPWERSD
                     RVSNLLRAVR"
     gene            3798..4283
                     /locus_tag="VGA78_15590"
     CDS             3798..4283
                     /locus_tag="VGA78_15590"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HEX9895351.1"
                     /translation="MIKMSVAHLGVDRSTNSPVVILREIGGERSLPIWIGTSEANAIA
                     MEMQGVKPQRPMTHDLLKHLLAGLGGELRRVHITDLRDDTYFAELQIVRGEQVVQVDA
                     RPSDSIALALRCNAPIFTSETLLDRASASSSSTEPTTDPEALKRYLEKLDPQDFGRFQ
                     P"
     gene            4411..>5265
                     /locus_tag="VGA78_15595"
     CDS             4411..>5265
                     /locus_tag="VGA78_15595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895352.1"
                     /translation="MLHRLTQTVAGPIDSTLASEAGRFRFRIPSDTGVVYLISARWAG
                     IEYFSEPLRGGPFDRAAALTLLVADTSSTTPVSVVARYVIIGAPDAARNRTAIDLFVL
                     RNSGYATRVGPDSMTPTWRHVLPPGTGAGSTGAPGSEISPEAIRFAGDTVMVFAPLSP
                     GDKQLLIQHTLPGSLSRLPLPLGEGADTLQVVAEEEGVVVRGLDPAPSQILDGRPLAR
                     WRADRRTDGRPDGLTDGEVIITFPGDSTAERWVVPLLAALAAFVMLGAGLLAGRHRPS
                     VRPSVRPSV"
BASE COUNT          786 a         1773 c         1823 g          883 t
ORIGIN      
        1 cctggggggc ggaccatggc cggtgctggg attcgtcctg ctgcacaacg cggtgcggct
       61 ggcgctggcc ccctggcttc tgtcgctcgg ctgggagcac ggggcgaagg tcggccacgc
      121 cctggcccag tcacccttgc cccgggccag cgtgctggcg gaggaagccg ccgcctttgc
      181 gggggccctg gccatcccgc tggtggctcg ccgctacctc gatgccgtct cgctcgaagc
      241 tacggtgggc gtgatagggc tgttgctggc ggtggtgttg ctgcggcgca aggcgctgcc
      301 cggcgtgtcg ccgctctcgc tcaccctgct ggtgggcgcg ggggcattgc tctggcactg
      361 ggggctcggg tgatcgaacg gaccgtgatg gtgatcaatt ccctcggtct tcacgcccgc
      421 ccggccgctc agctggtgcg gctggcgagt agctttcaat cccagatcga gctggcgaag
      481 gacgatctgt ccgtcaatgc caagagcatc atgggggtga tgatgctggc cgccgagtgc
      541 ggcagcagcc tcaccatccg ggccaacggc aatgatgccg agccggcggt acaggcgctg
      601 tcggagttgg tgaccggggg ctttggagaa tcatgagcga acgggttctg cacgggatcg
      661 gcgtgtcccc cggcgtggcc tacgggcctg cgctggtggt ggattggcgt ttccccgacg
      721 tgcctgatcg gggcatcggg ccggaacagg tcgaggcgga aatcgcccgg ctccgggcgg
      781 ccgtggagca ggtggtcgac cacctggaac aactgcgcga gcgggtccgc gagcgggccg
      841 gcgccgaaga gtccaacatc ttcgaagccc agatcctcat ggcgcgcgac ccggagtttc
      901 tcggggcctg cgagcacctg atccgcaaga atctgctctc cgccgagacc gcctacgagt
      961 tcaaggcgct ggaagtgcgg gtctcctggg ccgggaccgc caacgtgcgg ctgcgcgaac
     1021 gcctggccga tctctcggcg gtgcagatcc ggatgctgcg ggtgctggtt ggcgaccgcg
     1081 atgacgagct ggagatctcc cagcccgacg gcccggtgat catcgtggcc cacgagttgt
     1141 cacccggtct cacggtgcag ctcgaccggg accgtctggc cggcctggtc agcgaggagg
     1201 gaacccgcac ctcccacgcg gccatcctgg cgcactccct cgggattccc gccgtgatgg
     1261 gcgtgcgcga tgcgctcgct cgtgtccgga ccgggaccgt gctgctgatc aacggcgcca
     1321 gcggcgccgt gctgctcgat cccgatccgg ccgatctgcg cgaagccagc acccaggtga
     1381 gtcgccgtcg caagctggag ctggaaatcg aggcggtggc cgaccagccc agcgtgaccc
     1441 ccgatggcca gaaaatccgg ctcatggcca acgtcgacct ccccgaagag atcgacctgg
     1501 cggtgcggag cggtgccgag ggcgtgggac tggtccgcac cgagtttctc ctcaccgggc
     1561 gcaccgcgct gccgggcgaa aacgaccagg cggactattt ccggcgggtg gccacggcct
     1621 tccccaacca cccggtcacc atccggacct tcgatctcgg cggcgacaag ttcccggtgg
     1681 ctttcgactc ccccatggaa gccaatccct ttctgggctg gcgctcgatc cgggtgtgtc
     1741 tggaccagcc cgaggtgttc cgcccccagc tcagggccct gctccgcgcg gcagtccacg
     1801 gcaatgtgcg agtcatgctg ccgctggtga cccgggtgga cgagattctg gtcacccgtg
     1861 acatgctggc ggaggaagcc ctctcgctgc agcgcgccgg tgtgccggcc gcacgtagtc
     1921 tgcccctggg cgccatgatg gagacgcccg ccgcggccgt catcgccgac cgcctggcgc
     1981 tggtgtgtga ctttttcagc gtcgggacca acgacctcac ccagtacacg atggcggtgg
     2041 accggggcaa cgcccgactc gcctcccggt ttacccccca ggaccccgca gtggtccggt
     2101 tgctgaagca ggtgctggac gcggccgcgg cccgcgggat cgagtgcggc gtgtgcggcg
     2161 agatggcctc ggagccgctg accgcggtcc tgctgatggg actgggatac accacactga
     2221 gcgtggcgcc tcccaccctc cacttgatga agtggctgat ccagcgcatt ccctatcagg
     2281 cctgtcgcaa cgccgcgtcc gaggcgctcg acgccgattc gccggccgac gtggatgcga
     2341 ttctcaagcg ccacgttgct ccacacgtcg acgtgcacct gctggatccg catggcccgt
     2401 tgcctgcaag gggagcacgg gcttagcgta atgttcacgg gtcaccgttt agcgctgacc
     2461 gttcaccgtt cccgttcact ggtccctgaa tgcgcgcctc caatcggcac gtttttacat
     2521 ctgagtccgt cacggaaggc caccccgaca aggtggctga ccagatctcg gacgccgtgc
     2581 ttgactcgat actggcccgg gacccggcgg cgcgggtcgc ctgcgagact ctggtcacca
     2641 ccggcatggc cgtcgtggcc ggcgagatca ccacccgcac ctacgtccat attccagaca
     2701 tcgtccggga gacggtccgg cggatcggat acaccgacgc atcctacgga ttcgatgccc
     2761 agacctgcgc cgtcctcacc tcgatcgacc ggcagtcgcc tgacatcgcg atgggcgtgg
     2821 accgggatgg cgcgggcgat cagggcatga tgttcggcta cgccaccgac gagaccccag
     2881 agcgcatgcc cctcccgctg atgctggcgc accgcctggt gcaacgcctg gccgcggtca
     2941 ggaaggggct ggacggactg gagcagatcg cctggctccg gcccgatggg aaatcccagg
     3001 tctcggtgga atacgacgac gggacgccga tccgcgtcgc cacggtggtc gtatccaccc
     3061 agcacgcgga atcggtgcgg gggcggcggc tcagccagcg gaagctcaag gaggcggtga
     3121 ccgagcacgt tatccagccg gtcctccggc atgccgagct ggacgggcgc cggacccgga
     3181 tcctgatcaa ccccaccgga cggttcgtga tcggcggtcc gcacggcgac gcgggtctca
     3241 ccgggcggaa gatcatcgtc gatacttatg ggggcatggc ccggcacggc ggtggcgcct
     3301 tcagcggcaa ggatccctcc aaggtcgacc ggtcggcagc ttacgccgcc cggtgggtgg
     3361 cccgcaacat cgtggacgct cgattggctc gccgctgcga ggtgcaggtg gcctacgcca
     3421 tcggtgtggc ggaacccgtg tcggtgctcg tccatacttt cgggaccggg aagctgcctg
     3481 acccggtgtt ggaacgcgcg gtgcgtgagg tgtttgatct cactcccaag gggatcattc
     3541 gcgcgttgca cctgcgatcc ccgatttacc aggcaacggc cgcctacgga catttcggcc
     3601 gcaagccgca cgcggcgacg gtgcagggga agcgggtacg gctgtttccg tgggagcggt
     3661 cggatcgggt ctcgaacttg ttacgggccg tgcggtgaaa caggcggtga acggtcaacg
     3721 gtaaacagta agcgggcgac ggaacctcgg gtttaccgtt taccgttcac cgtggcagag
     3781 gcggggaggg gaaagaaatg atcaagatgt ccgtggccca tctcggcgtc gaccgctcca
     3841 ccaactcccc ggtggttatt ctccgggaga tcggcggaga gcgttcgctg cccatctgga
     3901 tcgggaccag cgaggccaac gccatcgcca tggagatgca gggggtcaag ccccaacggc
     3961 ccatgaccca cgatctgctc aagcatctgc tggccggctt gggcggcgag ctgcgtcggg
     4021 tccacatcac cgacctgcgg gacgatacct acttcgcgga actgcagatc gtgcggggag
     4081 aacaggtggt gcaggtggac gcgcgccctt ccgattccat cgcgctggcc ctgcgctgca
     4141 acgcccccat cttcaccagc gaaacgctgc tcgaccgtgc ctcggcatcc tcatccagca
     4201 ccgagccgac gactgatccc gaagccctca agcggtatct ggaaaagctc gatccccagg
     4261 atttcggccg ctttcaaccc tagcgccgtc gcgctggcgg gactcctcgc gtgtgcggct
     4321 caggccgcgg ggcaggagtc cgccggcgtc tcgggacagg tcctgcgccg cggggccagc
     4381 gacacgctgc cggcgtccgg ggcgcgggtg gtgctgcacc ggctgaccca gacggtcgcg
     4441 ggaccgatcg attccacact ggcatccgag gcgggtcgct tccgctttcg gattccttcc
     4501 gacaccgggg tcgtctacct gatcagtgcc cgctgggccg gtatcgagta cttctccgag
     4561 ccgttgaggg gtggaccgtt cgaccgggcc gccgcgctca cgctgctggt ggccgacacg
     4621 tcaagcacga cgccagtctc ggtggtggcg cgctatgtca tcatcggcgc cccggatgcc
     4681 gcgcgaaacc gcactgccat cgatctcttc gtgttgcgca actcggggta cgccacccgg
     4741 gtcggccccg attcgatgac gccgacctgg cgccatgtgc tcccgccggg caccggcgcg
     4801 ggcagcactg gtgcgcccgg cagcgagatc tcgcccgagg ccatccgctt tgccggcgac
     4861 acggtgatgg tgttcgcgcc gctgtcgccc ggtgacaagc agctgctgat ccaacatacc
     4921 ctgcccgggt ccctcagccg gctgccgctg ccgctggggg agggggccga taccctgcag
     4981 gtggtcgccg aagaggaggg cgtcgtggtc cggggcctgg acccggcgcc gtctcagatt
     5041 ctggatggaa ggccactggc gcggtggcgg gcggaccgac ggacggacgg acggccggac
     5101 ggactgacgg acggtgaggt gataatcaca tttcccggtg actcgaccgc tgagcgctgg
     5161 gtggtgccgc tgctcgccgc gctggccgct ttcgtgatgc tgggcgccgg cctcttggcc
     5221 ggccgtcacc gcccgtcagt ccgtccgtcc gtccgtccgt ccgtc
//
LOCUS       DASWKS010000546         2933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_293182, whole genome shotgun sequence.
ACCESSION   DASWKS010000546 DASWKS010000000
VERSION     DASWKS010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293182"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /locus_tag="VGA78_15600"
     CDS             <1..811
                     /locus_tag="VGA78_15600"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9895353.1"
                     /translation="VTPGYFATMGSRLVQGRLLDQTDGPDQPPVAVLNHTTVRRYFQD
                     QDPIGREIRFWGINRRIVGVVSDEKIHGLTEETPPAAYISMLQAPSQFGVVLVRTGGD
                     PAALASQVRQAIWSVDPQLAVYGIEPFELTVRSSVGQRRFAMLVLVVFAGLTLALALV
                     GIYGVLSYATEQRTREIGIRSALGAPRGRVAGLVIREGAMLAALGIGCGLGGALAGSR
                     LLESLLFGVTRLDPLTHLVVPVLVLGAALLAMWVPAWRAARISPIEALRRE"
     gene            complement(840..1136)
                     /locus_tag="VGA78_15605"
     CDS             complement(840..1136)
                     /locus_tag="VGA78_15605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895354.1"
                     /translation="MARANQVLQTANVGGLAVLLGVVVSTPTAAQGNGRIQARATVLS
                     AEPAADGLGLAQRFWAARREGRMERRFTTVQVTHERRTARRAPLVRVAIQYLRN"
     gene            1371..1871
                     /locus_tag="VGA78_15610"
     CDS             1371..1871
                     /locus_tag="VGA78_15610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895355.1"
                     /translation="MIRRAKVSTAVVAVLALSASTAAAQSANIQALANVFTAISVSGT
                     RDLDFGNVFPGIAKTVVPSAGTSGLFSATGQASTNVNMTFTLPTDLSSGANLLPIGTW
                     TGCFDTDNDPSAGCTGFTPSAVASAASFSGAGALFVFVGGTVTPGAGQASGAYTGTIV
                     IQLDYF"
     gene            1961..2416
                     /locus_tag="VGA78_15615"
     CDS             1961..2416
                     /locus_tag="VGA78_15615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895356.1"
                     /translation="MLRLAALALLACVLPAPTSAQVSVVGARDLQFGFVALGVPTVVL
                     PTDAVKSGQWTLTAPVGTRIQIRLTPPNQLLGPAGATMPVNFQNGDVFVQGTWSGALQ
                     EFFNPNATKNFRFTGGTQAILRLGGQVTPAGNQSTGPYANTVVCTINVN"
     gene            2395..>2933
                     /locus_tag="VGA78_15620"
     CDS             2395..>2933
                     /locus_tag="VGA78_15620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895357.1"
                     /translation="MYHQRELARAALICVGLGLGLTGPGTAQGVLVAPHAVFIDHRTR
                     SGWVQLYNPTTEPTEISVEAIFGFPITDSTGEFELRTVEQPDSTWPSAVGWLTAFPKR
                     TLLAPQARQTIRLLVTPPPGVADGEYWARLVITAKSGAPAVNGADSAAGITVGLNLEI
                     RTIIPLLYRKGEPATGVALS"
BASE COUNT          466 a          988 c          954 g          525 t
ORIGIN      
        1 agtcaccccc ggctatttcg ccaccatggg gtcacggttg gtgcaggggc gactcctcga
       61 ccagactgac ggccccgatc agccgccggt tgcggtgctg aaccacacca cggttcgacg
      121 ctatttccag gaccaggacc cgatcgggcg ggagatccgg ttctggggaa tcaaccgacg
      181 catcgtcggc gtggtctcgg atgaaaagat ccacggactg accgaggaaa ctcctcccgc
      241 ggcctacatc tcgatgctcc aggcacccag ccaattcggc gtggtgctgg tccggaccgg
      301 cggcgacccg gccgcgctgg ccagtcaggt gcggcaggcc atctggagcg ttgaccccca
      361 attggccgtg tatggcatcg agccgttcga gctcacggtg cggtcctcgg tgggccagcg
      421 ccgctttgcc atgctcgtgc tggtggtgtt cgcggggctg acgctcgcgc tggcgctggt
      481 cggtatctac ggggtgctga gctacgccac ggaacaacgg acccgggaaa tcggaatccg
      541 gtcggcgctc ggtgccccgc gggggcgggt cgccgggctg gtgatccgcg aaggcgccat
      601 gctggcggcg ctgggaatcg gatgtggcct gggcggcgca ctggcgggat cacgcctgct
      661 cgagagcctg ctgttcgggg tcacccggct ggacccgctg acccacctcg tggttccggt
      721 gctggtgtta ggcgcggcgc tgctggcgat gtgggttccg gcgtggcggg ccgcgcggat
      781 ctccccgatc gaggcgctgc gccgggagta acggactcgc ctcgccacct ggctggtcgt
      841 cagtttctca ggtactggat cgcgacgcgc accagcgggg cgcgtcgcgc ggttctccgc
      901 tcgtgcgtca cctgcacggt ggtgaaccgt cgttccatgc gcccctcccg gcgcgccgcc
      961 cagaagcgct gagccaaccc cagtccatcc gcggccggct ccgcgctgag cactgtggcc
     1021 cgggcttgga tccgcccgtt tccctgtgcc gcagtcggag ttgaaaccac cacgccaagc
     1081 agcactgcca gcccgcctac gttcgcggtt tgaagcacct ggttggcgcg agccatagcc
     1141 agctctgagg aatcatgcca agaaactgaa caattattgt acacgcataa ttggttattt
     1201 aacatgcagt taggtcagtt ttggcgagtg atggaagcaa aaaaatcgac aatgctactg
     1261 ctcaacggca cgtcgattgc tcataccccg ccctgagtga acctagcggc gctcgccgcg
     1321 aactcggact ccgtctgctg tccaaccgtt tcttggggag agaacgcacc atgattcgtc
     1381 gggcgaaggt atctacggcg gtcgtcgcgg tgctggcgct gtccgcgtcc accgcagcgg
     1441 cgcagagcgc caacatccag gcgctggcga acgtgtttac cgccatcagt gtgagcggca
     1501 ctcgtgacct cgatttcggc aacgtcttcc cgggcatagc caagaccgtg gtgccgagcg
     1561 ccgggacgtc cggtctgttc tcggcgaccg gtcaggcgtc gaccaacgtg aacatgacct
     1621 tcacgctgcc gaccgacctg agcagcgggg ccaacctgct gcccatcggg acctggaccg
     1681 ggtgcttcga caccgacaac gatcccagcg cgggctgcac gggcttcacc ccgtctgcgg
     1741 tggcctccgc cgcgtcgttc agcggtgccg gggcgctgtt cgtgttcgtc ggcggcaccg
     1801 tgacgccggg cgcgggacag gcttcgggcg cttacaccgg gacgatcgtg atccagctgg
     1861 actatttctg atgcaatagg tcgcgctttc tggctgagcc gcttcgggga aaaccgctgc
     1921 gttccccggg cggctccgca accttctgag catcccccta atgttgcgcc tcgccgccct
     1981 cgcgctgctg gcatgcgtgc tccccgcgcc gacctcggcg caggtatcgg tggtaggtgc
     2041 ccgcgatctc caatttggct tcgtcgcgct cggggtgccg accgtcgtgt tgcccaccga
     2101 tgcggtcaag agcggccaat ggaccttgac ggcgccggtc ggcacccgga tccagatccg
     2161 actcaccccg cctaaccagc tgctgggacc ggccggggcc accatgccgg tgaactttca
     2221 gaacggcgac gtctttgtcc aggggacctg gagcggcgcg ctccaggagt tcttcaatcc
     2281 gaacgcgacc aagaatttcc gattcaccgg cgggacccag gcgatcctcc ggctgggggg
     2341 acaggtgacg cccgccggaa accagtcgac cggaccctat gccaatacgg tggtatgtac
     2401 catcaacgtg aactagcgcg ggccgcgctc atctgtgtgg ggctgggtct gggattgacc
     2461 ggcccgggta cggcgcaagg cgtgctggtc gcgccccatg ccgtgttcat cgaccaccgc
     2521 acccgcagcg gctgggtcca actctacaac ccaaccaccg agcccaccga aatctcggtg
     2581 gaggcgatct tcggcttccc gatcaccgat tcgaccggag agtttgagct tcgcaccgtc
     2641 gagcagccgg acagtacctg gccctcggcc gttggttggt tgacggcttt ccccaagcgg
     2701 accctgttgg cccctcaggc gcgtcagacg atcaggctgc tggtcacacc accacccggc
     2761 gtcgccgacg gagagtactg ggcccgcctg gtgatcaccg ccaagagcgg ggcaccggcg
     2821 gtcaacggag cggattccgc agccgggatc accgtcgggc tcaatctgga aatccgcacc
     2881 atcatccctt tgctctaccg caaaggcgag cccgccaccg gcgttgccct ctc
//
LOCUS       DASWKS010000547         4300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3599608, whole genome shotgun sequence.
ACCESSION   DASWKS010000547 DASWKS010000000
VERSION     DASWKS010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3599608"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..975)
                     /locus_tag="VGA78_15625"
     CDS             complement(<1..975)
                     /locus_tag="VGA78_15625"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9895358.1"
                     /translation="MPSLSVALLVSAPAWRGSGASFGKIATGLARAGHRPLLVTAADD
                     VTRRFVQQGLPVRQLPLVRTGWRELREVGRLLREWPPDVVLADAPRDLRLAAAATGLH
                     RTPIIFRYNLSGRPLPGDPVSRIFFARIAAVVLQSGYARDRACRTSPWLMRRPHRVIG
                     NGYDGEALRPDPAAGVRFRQRHRIPPAQPVILSGAALYHDKGYAVALQAVARLAERRP
                     LTYVVCGDGAERAALEGIAAELRMPALFLGQLGASDLADAMNAADVVLHPAPGELFPN
                     LVAEAMARERAVIGVDSGATPELLGRDGMAGRLVATDDPELMASELEKL"
     gene            complement(978..1847)
                     /locus_tag="VGA78_15630"
     CDS             complement(978..1847)
                     /locus_tag="VGA78_15630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895359.1"
                     /translation="MAVLLSGFTIVRNAVLLDFPVVESIRSILPLCDEVVVNVGRSDD
                     QTLDLVRSIGDPRIRILETVWDFSRGEQLLAAETLRALRACRHRWGVCVQADEVLHES
                     GVPLLARSLDEVDANFRVEGLVVRYRHFFGDPFSEAVNRRWYRREVRVLRLNPELDIH
                     PFRDAQGFRVGPRHRKIRARLTEAEMYHYGWARSAAALRGRKTEDRKLYSAVHEPGAA
                     EPLLQWFPGIRPFTGQHPAVARHWVERHRHDPDRTVSPPRFSWRHLRFYLSDAVERLT
                     GARLFEFRNYRLV"
     gene            1927..2832
                     /locus_tag="VGA78_15635"
     CDS             1927..2832
                     /locus_tag="VGA78_15635"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895360.1"
                     /translation="MKIALMYHARLPVKGYGGTERVVVWLGRGLAELGHEVTLLAAPG
                     SKVPWARHVAINARRAARPDFDVRPHLPAGLDLVHAHQEIADPGIPWVWTLHGNSRTP
                     RTFSPNVIGLSADHARRQGLSRWVYNGLDPAEFEFRRTKGDYDLFLGRLHSVKGWQWA
                     VEGARQSQRRLLVAGGWRPVVSRWVRFVGSVDGRGKVEALAGARLLWSPVQWDEPFGL
                     TSIEALASGTPVLGTRRGALPEIVTPDVGALGDTLDQLLALIPTVLRCDPEVCRARVE
                     QVFHYRVMAEAYLDVYRSVGRSVGP"
     gene            complement(2818..3861)
                     /locus_tag="VGA78_15640"
     CDS             complement(2818..3861)
                     /locus_tag="VGA78_15640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895361.1"
                     /translation="MNRPSVVLVASIDEGKHAHGAQRGRALQRLGCDVTTVNVMERRG
                     PLGLFRSKDLRQRLEQALVQARPDLVLVTGVPELDPPTVEQLKGVAGGLWVNWFPDDA
                     RSIDQAAALAWPYDSVYAAGSDVADRLSAILHRAVPLLPLACDPSVYRPQKHRDQQYR
                     ANVVFAGSATPRREALLQHVVEFGLALWGPGWRVTGLRDYCRGETLRTEDFVRAYAGA
                     SVALNIHHTAEGGDGPEAFCNQRCFELAAIGALQVVDRRTDLARWFILEDEILVFDDP
                     LQLRRIVEDALQDQTALDRIAVAGRDRVLSQHTYMHRMQELLGRELELGVDQSVGRPV
                     GQEQNLPADSGTN"
     gene            complement(3858..>4300)
                     /locus_tag="VGA78_15645"
     CDS             complement(3858..>4300)
                     /locus_tag="VGA78_15645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9895362.1"
                     /translation="NATPDQVARAAEAANATEFIARLPQQYQTMLGERGARLSGGQRQ
                     RIAIARALLRDAPILILDEATSALDTESERLVQQAIDRLMRDRTVLVIAHRLATVRHA
                     DQILVLDGGRIVERGNHESLLAAGGLYRRLHDLQFVGLAELAAR"
BASE COUNT          699 a         1496 c         1494 g          611 t
ORIGIN      
        1 gagcttctcc agttccgaag ccattagctc cggatcatcg gtggccacca gccggccggc
       61 catgccatcg cggcccagga gctccggagt ggccccggag tccactccga tgacggcccg
      121 ctctcgggcc atggcctcgg ccaccaggtt gggaaacagc tcacccggtg ccgggtgcag
      181 caccacatcg gccgcgttca tcgcatcggc caggtcggag gctccgagct gacccaggaa
      241 cagcgccggc atccgcagtt cggccgcgat tccctccagg gcggcgcgtt ccgcgccatc
      301 gccgcacacc acgtaggtaa ggggccgccg ttcagccagt cgagccacgg cctgcaaggc
      361 cacggcatac cccttgtcgt gatacaaggc cgcaccgctc agaatcaccg gctgcgcggg
      421 gggaatgcgg tggcgctgcc ggaagcgtac acccgcggcc gggtcgggcc gcagcgcctc
      481 gccatcgtag ccgttgccga tcacacgatg gggccggcgc atgagccagg gtgacgtacg
      541 gcaggcccgg tcgcgggcat agccgctttg cagcaccacg gccgcgatac gggcgaaaaa
      601 gatccggctc accggatcac cgggcagggg ccggccgctc aaattgtagc gaaagatgat
      661 gggagtccgg tgcagtccgg tcgcggccgc ggccagccgc aggtcccgcg gcgcgtcggc
      721 caggaccacg tcgggaggcc attccctgag caggcggccg acctcgcgca gctcgcgcca
      781 cccagtgcgg accagcggga gctgtcgcac cggaaggccc tgctggacga aacggcgggt
      841 gacgtcgtca gcggcggtga ccagcagcgg ccggtggcca gcgcgcgcca gcccggtggc
      901 gatcttcccg aagctggcac ccgagccgcg ccacgccggg gccgacacca gcaacgcgac
      961 cgagagggac ggcaccccta caccagccga tagttgcgga actcgaacag ccgggcgccg
     1021 gtgaggcgct cgaccgcgtc ggagagatag aatcgcaggt gacgccagga aaaccggggc
     1081 ggagaaacgg tgcgatcggg atcgtgccgg tggcgctcca cccagtggcg cgccaccgcc
     1141 ggatgctgtc ccgtgaacgg ccggatcccg gggaaccact gcagcaacgg ctccgccgcg
     1201 ccgggttcgt ggaccgcgga gtagagcttg cggtcttccg tcttccgccc ccgcaacgcg
     1261 gccgccgagc gagcccatcc gtagtggtac atctcggcct cggtgagacg ggcccggatc
     1321 ttccgatgcc ggggtccgac ccgaaacccc tgcgcgtccc ggaacggatg gatgtcgagc
     1381 tctgggttca gccgcagcac ccgtacctct cggcgatacc agcggcggtt caccgcttcg
     1441 ctgaagggat cgccgaagaa atggcggtag cgcaccacca gcccttcgac ccggaaattc
     1501 gcatccacct catccaggct gcgcgccagc aacggaaccc cggactcgtg cagcacctcg
     1561 tcggcctgca cgcagacccc ccagcgatgg cgacaggcgc gcagggcccg gagggtttcc
     1621 gccgcgagca gctgttcccc ccgactgaaa tcccacacgg tctcgagaat ccggatcctg
     1681 gggtcgccga tcgagcggac caggtcgagg gtctggtcgt ccgaccggcc cacgttcacg
     1741 accacctcgt cgcagagggg cagaatggag cggatgctct cgaccaccgg aaagtcgagc
     1801 agcaccgcgt tacggactat ggtaaagccg gacaggagca cagccattga cgattgacag
     1861 tcgatgattg acgattgcgc gacgggattc gtggctcaat catcaaaggt ccatcaccaa
     1921 tcgtcaatga agatcgccct gatgtaccac gcccgcctgc cggtgaaggg ctacggcggg
     1981 accgaacggg tggtggtctg gctgggccgg ggcctggccg agctggggca cgaggtcacg
     2041 ctgctggccg ctcccggttc caaggtcccg tgggcccgtc atgtcgcgat caacgcccgg
     2101 cgggccgctc gcccggactt tgacgtgcgg ccccatctcc cggccggcct cgacctggta
     2161 cacgcccatc aggagatcgc cgatcccggc atcccgtggg tgtggacgct gcacggcaac
     2221 agtcgaacgc cgcggacctt ttcgcccaac gtcatcggcc tgagcgccga ccacgcccgt
     2281 cggcagggac tgagccggtg ggtctacaac ggcctggacc cggccgagtt cgagttccgg
     2341 cgcaccaagg gcgactacga cctctttctg ggccggctcc attcggtgaa gggatggcaa
     2401 tgggcggtgg aaggggcgcg gcagagccag cggagactgc tggtagcggg cggatggcga
     2461 ccggtggtca gccgatgggt ccgctttgtc gggagcgtcg atgggcgggg caaagtggag
     2521 gcgctcgccg gcgccagact gctctggtca ccggtgcagt gggatgagcc gttcggcctc
     2581 accagcatcg aagcgctcgc gagcggtacg ccggtgctcg gcacccgacg cggtgctctg
     2641 cccgagatcg tgacgcccga tgtcggcgcc ctgggcgaca cgctggacca gctgctggcg
     2701 ctgatcccca cggtcttgcg ctgcgacccg gaggtgtgcc gcgcccgggt ggagcaggtc
     2761 tttcactacc gggtgatggc ggaggcgtat ctcgacgtct atcggtcggt cggtcggtca
     2821 gttggtccct gagtcggccg ggaggttctg ctcctgaccg actggccgac cgaccgactg
     2881 atcaacgccc agctcgagct cccgccccag caactcctgc atccgatgca tgtaggtgtg
     2941 ctggctcaac acccggtccc ggccggcgac cgcgatccgg tccagggcgg tctgatcctg
     3001 cagggcatcc tcgacgatcc gccgcagctg gagcgggtcg tcgaacacca ggatctcatc
     3061 ctccaggata aaccagcgcg cgagatcggt gcggcgatcg accacctgca gggcgccgat
     3121 ggccgcaagc tcgaagcaac gctggttaca gaaggcctcg ggcccgtcgc ccccctcggc
     3181 cgtatggtga atgttgagtg cgacgctggc cccggcgtag gcccgcacga agtcctcggt
     3241 ccggagcgtc tcgccccggc agtagtcgcg cagcccggtg acgcgccacc ccggacccca
     3301 gagcgccagc ccgaattcca ccacgtgctg cagcaacgcc tcccgccgcg gcgtggccga
     3361 accggcgaag accacgttgg cccggtactg ctgatcgcgg tgtttctgag gccggtagac
     3421 cgacgggtcg caggcgagag gcagcagcgg caccgcgcgg tgaaggatgg cggagagccg
     3481 gtcggccacg tcactgccgg cggcgtagac cgagtcgtag ggccaggcga gcgcggccgc
     3541 ctggtcgatg ctgcgcgcat catcggggaa ccagttgacc cacaggccgc ctgccacgcc
     3601 tttcagctgc tccaccgtcg ggggatcgag ctccgggacc ccggtcacca gcaccagatc
     3661 ggggcgggcc tggacgaggg cctgctccag ccgctggcgc aggtccttgg agcgaaacag
     3721 acccagcggg ccgcgccgtt ccatcacgtt gacggtcgtg acgtcgcagc cgagccgttg
     3781 cagggcccgg ccgcgctggg ccccatgggc gtgcttgccc tcgtcgatcg aggcgaccag
     3841 gaccaccgaa ggccggttca tcgggcggcc agctccgcca gaccgacgaa ctgcaggtca
     3901 tgcagccggc gatacaagcc gccggcggcg agcagtgatt cgtggttgcc ccgctccaca
     3961 atccggccgc cgtcgagcac caggatctgg tccgcgtgcc ggaccgtggc gaggcggtgg
     4021 gcgatcacca gcaccgtccg gtcgcgcatc agccgatcga tggcctgctg caccagccgc
     4081 tccgattcgg tgtcgagcgc gctggttgcc tcatccagga tcagaatggg cgcgtcccgg
     4141 agcagcgccc gcgcgatggc gatgcgctgg cgctggccgc cggagagccg cgcaccgcgc
     4201 tcgcctaaca tggtctgata ctgctgcggc agccgggcga tgaactcggt cgcgttggcg
     4261 gcttccgccg cccgggccac ctgatcgggt gtggcgttcg
//
LOCUS       DASWKS010000548         2754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2524785, whole genome shotgun sequence.
ACCESSION   DASWKS010000548 DASWKS010000000
VERSION     DASWKS010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2524785"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            537..857
                     /locus_tag="VGA78_15650"
     CDS             537..857
                     /locus_tag="VGA78_15650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895363.1"
                     /translation="MYSRNRVLPLLLGLVWACGGSGKAQSSGGRQTAKTTAQAAKLDP
                     CTMVTQAEAEAVMGKPLGPPEMKVGGGCWFGDELGLSILPVSLPSRQAFERAAPPRSR
                     CTCS"
     gene            complement(914..1405)
                     /locus_tag="VGA78_15655"
     CDS             complement(914..1405)
                     /locus_tag="VGA78_15655"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9895364.1"
                     /translation="MRVVEHLGLVTALTLSLGPATAGGQTSGPPAARATGPLADSLRA
                     FGLKMAEMLRRLDAEGIIALYGDRPHFVHVDNGTVIPWSQLSAMMTSYFATARSNPVS
                     VLGEPGVAILDRDNAVVYLVHRFEANEGRPAHDGVWTGVMHRFPDGWKIVHSHSSDRR
                     TPP"
     gene            complement(1437..2315)
                     /locus_tag="VGA78_15660"
     CDS             complement(1437..2315)
                     /locus_tag="VGA78_15660"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX9895365.1"
                     /translation="MLRSLSGSPRVVNSKPVRMLDYSVEIQRSGPATLPAIYHNFHMV
                     AVTLTGERLVVREGVDAERGTRFNPGESSIHPAGPGERVTWPRGAHCLYLHLHPRLIR
                     RIGEQIWGVPGLALQHRPLLRDPVIRDIGFELHRLTDRDSAPAMSAAAHELVIALAHH
                     VVTRYAGPAGPPVRVGTLSAEEILDVFRDGCPSWDGVATLAARCGFTRSHFPRRIRAL
                     TGLAPYAMVLGSRIEAAKNLLERREISLSAVAYATGFADQSHLTRVFRRAIGWTPARY
                     RETNGTKVQDHPASPD"
     gene            complement(2563..>2754)
                     /locus_tag="VGA78_15665"
     CDS             complement(2563..>2754)
                     /locus_tag="VGA78_15665"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9895366.1"
                     /translation="MNNVLPGMIDTYPADELDRSAIPAGRRGTAEEVARVVGFLVSDE
                     SSYLTGQSLLVDGGLVRGL"
BASE COUNT          470 a          905 c          888 g          491 t
ORIGIN      
        1 gcgatgtgga agatgtcctt ttccatatac cctataccct catccgttcg cctttcattc
       61 cgcccactcg ctgggatgcc ttacgcgctg cctatcgcac gacaatttag ggtaagacga
      121 gaagggcaag ctctggggaa cgcgttacct ctcgatgggt gtcgtcaccc cccagcacct
      181 tggttggctg ggctgaaagt gagggctggg tgcgtcccca gaaacgccac gctcagcccc
      241 tgcacacgat cgggccagac ggcacactgg gttagcccgg gcgtttaccc gctccacttg
      301 ggcccgaaca gtgccgtggc cacgaagtca gcaatcaggc aataccgagc cgcgcaaaca
      361 gtcccgctcc atagggcttc cgcctccgct ccaacctact tcgtgcgcat tgatgtcgct
      421 aattgagctc gagtgtcgcc gtcccagcac tgggcccctc cgtgtccgct tcggacttat
      481 ctcgacgctt tatcagagag cgccatcaac cgatcactgg accagcaggg gtcatgatgt
      541 actcacggaa ccgagtgctt cctctgctgc tgggactcgt ctgggcctgc ggtggatcgg
      601 gcaaggccca gtcgagcggg ggccgtcaga ccgcgaagac caccgcccag gcggccaagc
      661 tggatccctg caccatggtg acccaggccg aggccgaggc cgtgatgggc aagccgctgg
      721 ggcctcccga aatgaaggtg ggcggcggat gctggttcgg tgatgagctg ggcctcagca
      781 tcctgccggt ctcgctacca tcccgccagg cattcgagcg cgcagcaccg ccaaggtctc
      841 gctgcacctg cagctgatca actcggcgcg cggaggtcgc ccgtcgcgcg gcgaaagcgc
      901 cggcttcgac acgctagggc ggcgttcgtc ggtccgagct gtgcgagtgg acgatcttcc
      961 agccgtcggg gaatcggtgc attactccgg tccacactcc atcgtgcgcc gggcggccct
     1021 cgttggcttc gaaccgatgc accagataga cgaccgcatt gtcccggtcg agaatcgcca
     1081 cgccgggctc gccgagcact gaaaccggat tgctcctggc cgtggcgaag taactggtca
     1141 tcatcgccga caactgagac caggggatca cggttccgtt gtcgacgtga acgaagtgcg
     1201 gccggtcacc gtagagggca atgattccct cggcgtcaag ccgccggagc atctcggcca
     1261 tcttgagccc gaatgcccgc aggctgtccg ccagcggacc ggtggcgcgg gcggccggtg
     1321 gtcccgacgt ctgaccgccg gcggttgccg gaccaagcga aagcgtcaag gccgtcacga
     1381 ggcccaggtg ctccacgacc ctcatgttgt ccccgagttg tcaggttcgg gacaagctag
     1441 tccgggctcg ctggatggtc ttgaactttt gtgccatttg tctctcgata ccgggccggg
     1501 gtccatccga tcgcccgccg gaagacccgg gtgagatggc tctggtcggc gaatccggtg
     1561 gcataggcca ctgcgctcag cgatatctca cgacgctcca gcaggttttt ggccgcctcg
     1621 attctgcttc cgaggaccat cgcgtaggga gccaggcccg tgagggcccg gatccgacgg
     1681 ggaaagtgcg atcgggtgaa gccgcatcgc gccgcgagcg tcgccacgcc atcccagctg
     1741 ggacagccat cgcgaaacac gtccaggatc tcttcggccg acagggtgcc gacccggacc
     1801 ggaggaccgg ctggcccggc gtagcgggtg accacatgat gggcgagggc gatgacgagc
     1861 tcatgcgccg ccgcgctcat tgcgggagcc gaatccctgt cggtgagccg atgcagctca
     1921 aatccgatgt cgcggatgac gggatcgcgc aggaggggcc gatgctgtag cgccaagccg
     1981 gggacacccc agatctgttc cccgattcga cgtatcagtc ggggatgcag gtgcaggtac
     2041 aggcagtggg cccccctggg ccaggtgact cgttcccccg ggccggcggg atggatgctg
     2101 ctctcccccg gattgaaacg ggtgccccgt tcggcgtcga cgccctcccg cacgaccagt
     2161 cgctcgcccg tcaaggttac ggccaccata tggaaattgt ggtagatggc cggcagcgtg
     2221 gcgggtccgc ttcgctgaat ctccacgctg tagtcgagca tgcggacggg cttcgagttg
     2281 accacacggg gcgatccgct cagcgatcga agcatgggat tgggccgctc tatctcccga
     2341 agacctgaat gaagtttccg gccttgtcct tgatcaggcc attggcgggt tggtccggcc
     2401 gtgccggaaa cgggccagca gcgatttcca cccctcgggc tctcagcagg cctggcctcg
     2461 aacggcgcct ggtactgtga gacggataat gagggagatg gctttcgagc tcatacctcc
     2521 cctacggtcg cgctgggagg gaagttctgg atcagctccc tgctacagcc cgcggaccag
     2581 cccgccgtcc accagcagac tctgcccggt gaggtagctc gactcgtccg acaccaggaa
     2641 cccgaccacc cgcgccacct cttcggcggt cccccgccgt ccggccggga tggcggatcg
     2701 gtccagctcg tccgccgggt aggtatcgat catcccgggg agcacgttgt tcat
//
LOCUS       DASWKS010000549         5282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_294266, whole genome shotgun sequence.
ACCESSION   DASWKS010000549 DASWKS010000000
VERSION     DASWKS010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5282
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294266"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VGA78_15670"
     CDS             complement(<1..199)
                     /locus_tag="VGA78_15670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895367.1"
                     /translation="MNLGGIGSLTGVGAIADDRGTVSRTGNAGAFRHRHQPDFVVSHL
                     RTAPGPLTAPAAGTVTRADSPL"
     gene            198..1388
                     /locus_tag="VGA78_15675"
     CDS             198..1388
                     /locus_tag="VGA78_15675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895368.1"
                     /translation="MLIPAALAILGAGGGEIVIVAGPKVGGFPAVMVRNVPVLARALG
                     GPATLGPGHVSRSGYGGTAVLDSFRFALRPGNDPATIGGRKTTHRVLTVESWWVDRRT
                     RTPVRETGRADLWFAGDLPFSRVPLTLPLGTVGGALPLSQNHPEVSAHVLGKVIGELE
                     PLGLLLRARVVDSVAPDENPNAEIGLGGGAVERSIEVDSIQSVAEEPGAPGWTGLPVL
                     TAPQGLALEIGMIVGGEPCSGERATGSFEYSSSGPVSFMAGGAGASLRDGEGLGYASV
                     VLGGRGRNVVECTLVIFSDSARVPGSYTVIAPSLAAFAGHQKEAIVVHFLADPAAQAL
                     TRFLALEAGEVRLERADGQMAKGTITGTGWVAELDLRYRRRVEDGLGFEASFEAPREA
                     GGRN"
     gene            1491..2084
                     /locus_tag="VGA78_15680"
     CDS             1491..2084
                     /locus_tag="VGA78_15680"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HEX9895369.1"
                     /translation="MSAAPGEITALLNRWSNGDPEAFPRMVALAYDDLRAIAHRRLLA
                     TGGGTLSTTALVHEVFLRLVGREGGGLWESRAHFYAFSSRAMRHILVDHARRAGAMRR
                     GGDQVRMPLEETAIAGADGSADVLGVDEALNRLAERNPRMAQVCELRFFGGLTVPEVA
                     EVLAISVRTVEREWTRAKVYLLESLEGEDGTEGKGGM"
     gene            2081..4666
                     /locus_tag="VGA78_15685"
     CDS             2081..4666
                     /locus_tag="VGA78_15685"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895370.1"
                     /translation="MSRDGLSPLLWERWDEVDRLLMAAFDLPVEQRAGFVHAEVPEAG
                     PFRDLVLRLVERLATGHDRVTAPQESVVRAAFGEADPSPGDLEPGQTVGRYVVVRRRA
                     RGGMATVYEAERSDGAYRQRVALKILRRGLDTDDLIRRFLTERQILSSLSHPNIARLL
                     DGGSTPDGRPFLVMELVNGQPVTRYADESRLDVSGRLRLFLGVADAVHAAHRQLVIHR
                     DIKPSNILVDHDGRVKLLDFGIAKLMASDTEHTQAGARALTPEYASPEQLRGDPVTTA
                     SDVYQLGLLLRELLTGLLPLGTDTHPGEPPLRMSRLAPRGVGTSPSAAARAAARSTTP
                     AGLARRLRGDLDLIVAKALRPEAESRYASADELAADVRRHLRGLPILAHQESVGYRSR
                     KFVARHAWAVGAGSAAIVLLAGYALTVTVQSRRIAAERDRAELEARKASQVTDFLVDL
                     FHSADPNQAGGDDITARDLLEQGARRLDEEEVQDPAVRAAMLGAIGRSYQQLGLYREA
                     RFHMERAVEAHRTAGPVTDALAGDLAILAHLVNMTDPPAAHALYEEAVATAERSGGPH
                     SPRLGVILSNYSAALAHTHPDDARPGEMQIRALQILRAAPGDLRKELAQALLISSYGK
                     PPEVGIPRMQEALAILRSLHGDRHSAVAGALSDLALATERVDPLAADSLMQEALGVKI
                     LIYGRRHALLLGTLNNLAALRRDRGDFAGAEPLYREVLALRTELYPEHQVPQAYTHYG
                     LGLVLTETGQPREGEAHLRNALAILEREMPHAHPLVSLTRAALGNALSRQGRFREAEV
                     LLIRALPRILDGPLNPSEKARALRWMVTLYDRWGQPGKVEIYRQHLDSLMANTDLVPA
                     ESGGR"
     gene            complement(4695..>5282)
                     /locus_tag="VGA78_15690"
     CDS             complement(4695..>5282)
                     /locus_tag="VGA78_15690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895371.1"
                     /translation="PGPRKLPVGAKLLFGCAATLALGLLGMAVMVGVGGFAVKRGIDA
                     VVGHAEDQREATALLDRLERDYRFQPPIDGVVSPALRNRFASVTERAWTEISDWATEV
                     RELKAPGAARPGRRFTLGDAVAVARSADGVARSRLVLARALSAERMSLAEYLWTGQTL
                     RRDSQGGQGSTPVEAADAMLVLNLAAAWGQAERLR"
BASE COUNT          778 a         1780 c         1912 g          812 t
ORIGIN      
        1 caagcggtga gtcagcccgg gtgacggtgc cggccgccgg ggcggtcaac ggtccgggcg
       61 ccgtcctgag gtgggagacc acgaagtcgg gttggtgccg gtggcggaac gcgccggcat
      121 ttcccgttcg cgagacggtg ccccgatcgt ccgcgatggc cccgactcct gtgaggctcc
      181 cgatgccccc gaggttcatg ctgatccccg ccgccctcgc catcctgggc gccgggggcg
      241 gcgagatcgt cattgtagcg ggtcccaagg tgggcggttt tcccgccgtc atggttcgaa
      301 acgttccggt gctggcccgg gcgctgggcg ggccggcgac gctcgggccg ggacacgtct
      361 cccgatccgg gtacggcggc accgccgtgc tcgactcgtt ccggttcgcg ctccgcccag
      421 ggaacgatcc ggccacgatc ggcgggcgga aaaccaccca ccgggtgttg acggtggaat
      481 cctggtgggt cgaccggcgg acccgcaccc cggtgcggga aaccggacgc gccgacctct
      541 ggtttgccgg tgacctgccg ttttcccggg tgccgctcac cctgccgctc gggaccgtgg
      601 ggggagcgct gcccctgtcc cagaaccatc ccgaggtctc cgctcacgtt ctggggaagg
      661 tgatcggcga gctggagcct ctcggcctgc tgctccgggc cagggtagtc gattcggtgg
      721 caccggacga gaacccgaat gccgagatcg ggctgggcgg aggagcggtc gagcgctcga
      781 tcgaggtgga ctcgatccag tctgtggccg aggaaccagg cgcacccggg tggaccggtc
      841 tgccggtgct caccgccccg cagggattgg cgctcgaaat cgggatgatc gtcggggggg
      901 agccatgcag tggcgagcgg gccaccggct ccttcgagta ctccagctcg ggcccggtct
      961 cgttcatggc cggaggagcg ggcgcgtcgc ttcgggacgg ggaggggttg ggttacgcct
     1021 cagtggtcct gggtggacga ggccggaacg tggtcgagtg cacccttgtc atcttcagcg
     1081 actcggcccg cgtgccgggg agctacaccg tgatcgcgcc ttcgctggct gcgttcgcgg
     1141 gacaccagaa ggaggcgatc gtggtccact tcctggcgga tccggccgct caggccctga
     1201 cccggttcct ggcgctcgag gcgggagaag tgcggctgga gcgcgcggat ggccagatgg
     1261 cgaagggtac catcacgggg actggctggg ttgcggagct cgacctccgc taccgaagga
     1321 gggtggagga cgggctgggg ttcgaggcct ctttcgaagc cccgagggag gccgggggcc
     1381 ggaactgacc gttttgcatt gtgaaccgga gcggatcgtg gcgggttggc aagccccggg
     1441 atcggaagta tcttcgccca gacctgtcct ccggcacgcc gggtacatcc atgtcagccg
     1501 ctcctggcga gatcaccgcc cttctcaacc gatggagcaa cggggatccc gaggccttcc
     1561 cgcgcatggt ggcgctggcc tacgacgacc tccgggccat cgcgcaccgc cggctgctgg
     1621 cgaccggcgg agggaccctg tccaccacag cgctggtgca cgaggtgttt ctccgcctgg
     1681 tgggccgcga gggcggaggc ctgtgggaga gccgagccca tttctacgcc ttctcgtccc
     1741 gggccatgag gcatatcctg gtggatcacg cccggcgggc gggagccatg cgccggggag
     1801 gagaccaggt ccggatgccg ctggaggaaa ctgccatcgc cggcgccgac ggatcggctg
     1861 acgtgctggg agtggacgag gccctgaacc gtctggctga gcggaatccg cggatggcac
     1921 aggtctgcga gctgcggttc ttcggcgggc tgacggttcc ggaggtcgcc gaggtgttgg
     1981 cgatctcggt ccgtacggtg gaacgggagt ggacccgggc gaaggtgtat ctgctggaaa
     2041 gtctcgaagg ggaggatgga acagagggga agggaggaat gtgagccggg acgggctctc
     2101 tccgctgctc tgggagcgct gggacgaggt ggacaggttg ctcatggccg cgttcgacct
     2161 cccggtcgag caacgcgccg ggttcgttca cgccgaagtc ccggaggctg ggccgttccg
     2221 cgatctggtt ctccgcctgg tcgagcggct ggcgaccggg catgaccggg tgactgcacc
     2281 gcaggagtcc gtggttcggg ccgcttttgg cgaggcggat cccagcccgg gcgacctgga
     2341 gccgggccaa accgtggggc ggtacgtcgt ggttcggcgc cgggcccggg gcggaatggc
     2401 gaccgtgtac gaggccgaac ggagcgacgg ggcctaccgc cagcgggtgg cgctcaagat
     2461 cctccgccgg ggactggaca ccgacgacct gatccgccgc ttcctcaccg aacggcagat
     2521 cctctcctcg ctgtcccatc ccaacatcgc ccggctgctc gacggcggct ccacccctga
     2581 cgggcggccg tttctggtga tggagctggt gaacgggcag ccggtcacac ggtatgccga
     2641 cgagagtcgg ctcgatgttt cgggccggtt gcggctgttc ctgggcgtgg ccgacgccgt
     2701 gcacgccgcg catcggcagc tggtgattca tcgggacatc aaaccgtcga acatcctggt
     2761 cgaccacgat gggcgggtga aactgctcga tttcgggatc gccaagttga tggccagcga
     2821 taccgagcac acccaggccg gcgcccgggc gctgacgccc gaatacgcca gcccggaaca
     2881 gctccgcggc gaccccgtga ccaccgcctc ggatgtgtac cagcttgggc tgctgctccg
     2941 cgagctgttg accggcctgc tgccgctggg caccgacact catccgggag aacccccgct
     3001 tcggatgagc cggctggctc cccggggtgt gggcacctcc cccagcgcag cagcccgggc
     3061 cgccgcccgc tcgaccacgc cggcagggct cgctcgccgc cttcggggcg atctcgatct
     3121 catcgtggcc aaggcactcc ggcccgaagc cgagtcccgc tacgcctccg cggacgaact
     3181 ggcggccgac gtgcggcggc acttgagggg gctgccgatt ctggcccacc aggagtcggt
     3241 cgggtaccgg agccgaaaat tcgtggcccg gcacgcctgg gcggttggag cggggtcggc
     3301 cgccatcgtt ctgttggctg gctacgccct gacagtgacc gtgcagagcc ggcgcatcgc
     3361 ggccgagcgg gaccgcgccg agctggaagc ccggaaggcg agtcaggtga ccgatttcct
     3421 ggtggatctc ttccactccg cagatcccaa ccaagcgggc ggggacgata tcacggcgag
     3481 ggacctgctg gagcaggggg cccgccggct cgatgaggag gaggtccagg accctgcggt
     3541 ccgggccgcg atgctcggag cgatcgggcg cagctaccag cagctcgggc tctaccgcga
     3601 agcccggttt cacatggagc gcgcggtcga ggcgcatcgg acggcgggtc cggtgaccga
     3661 tgcgctcgcc ggagacctcg ccatcctcgc gcacctggtc aacatgactg acccccccgc
     3721 ggcccatgcg ctgtatgagg aggctgtcgc cacggcggag cggagcggcg gcccccacag
     3781 cccccgtctc ggcgtcatcc tgagcaacta ctcggcggcg ctggcacaca ctcatcctga
     3841 cgacgcccgt cccggcgaga tgcagatccg ggccctccag attctgcgcg cggcgcccgg
     3901 tgatctcagg aaggagctgg cgcaagcgct gctgatctcc tcctacggca agcctcctga
     3961 ggttgggatc ccccggatgc aggaggccct ggccatcctc cggtcgctcc acggggatcg
     4021 ccactcggca gtggcggggg cgctcagcga cctggcgttg gcgaccgagc gggtggaccc
     4081 cctggccgcg gattctctca tgcaggaggc cctgggcgtc aagatcttga tctacggccg
     4141 ccggcacgcg ctcctgctcg gcaccctgaa caacctcgcg gccctgcgcc gggaccgggg
     4201 cgatttcgcc ggtgcggagc cgctgtatcg ggaagtgctc gcgctgcgga cggagctgta
     4261 ccccgagcat caggtgccgc aggcctacac tcactacggg ctgggactgg ttctgacgga
     4321 aaccgggcaa ccccgcgagg gcgaggctca cctccggaac gcgctcgcta tcctggagcg
     4381 agagatgccc cacgcccacc cattggtcag cctgacccgg gcggcgctcg gcaatgctct
     4441 cagccggcag ggacggttcc gggaagcgga agtgctcctg atccgggcct taccccggat
     4501 tctcgacggc ccgctcaacc ccagtgagaa ggcccgggcc ctgcgctgga tggtgacgct
     4561 ctacgaccga tggggccagc ccgggaaagt ggagatctat cggcagcacc tggacagcct
     4621 gatggccaac accgatctgg tccctgcgga atcgggtgga cgctgagtcg ctccggaagg
     4681 ccggtgtccc gcggtcatcg caggcgctcg gcctgccccc acgcggctgc cagattcagg
     4741 accagcatcg cgtcggcggc ttccaccggt gtcgagccct gtccgccctg gctgtcgcgc
     4801 cggagcgtct gtccggtcca gaggtactct gcaagcgaca tccgttcggc cgagagcgcc
     4861 cgcgccagga ccagccggga gcgcgcaacc ccgtcggcgg agcgggccac cgcgaccgca
     4921 tcccccaaag tgaaacggcg tccggggcgc gcggcgccgg gcgccttcaa ctctcgcacc
     4981 tccgtggccc agtccgagat ttcggtccag gcccgctcgg tcactgatgc gaacctgttc
     5041 cggagggcgg gcgatacgac gccatcaatg ggcggctgga atcgataatc ccgctccagc
     5101 cggtcaagga gcgccgttgc ttcccgctga tcttcggcgt gccccaccac ggcatcgatg
     5161 ccacgcttga ccgcgaaccc acccactccc accatgacgg ccatgcccag aaggccgagc
     5221 gccagggtgg cggcgcatcc gaacagcagc ttggcgccga ccggaagctt gcgggggccg
     5281 gg
//
LOCUS       DASWKS010000550         2329 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1403913, whole genome shotgun sequence.
ACCESSION   DASWKS010000550 DASWKS010000000
VERSION     DASWKS010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403913"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            503..1138
                     /locus_tag="VGA78_15695"
     CDS             503..1138
                     /locus_tag="VGA78_15695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895372.1"
                     /translation="MRHAPRWALGVLMALVMACQERAQEPVPPPPAVSPTSSLARSDQ
                     LILVTAKVALPPGDVQPGDLPEPASPEAGLLVKYCSQCHDFPTPTMHAAVDWPQIVRR
                     MWLRMDRLPDTLQIQIPELGERIALVNYLVANALRVSGAVLPPGPGRQEFSTICSRCH
                     ALPDPRAHTAPDWPQVFMRMERNMERMKVRAPGPEESRQIVTYLQANGARP"
     gene            1156..2313
                     /locus_tag="VGA78_15700"
     CDS             1156..2313
                     /locus_tag="VGA78_15700"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9895373.1"
                     /translation="MSALLLLTPLSMGWAQRPTGSTQNALAGSWVFGAKGCANCHAIN
                     GVGKTVGPDLGRGELRSYSDLAAAFWNHYPRMAARMREQGIQPPRIGSDDMGDLIAFL
                     TSVNYFDPPGNAERGKTSFARKQCVRCHQFGGAGGVVGPDLDQLKQVGSPIDIAAALW
                     NHGPAMSQAMTARGISRPSFTAAELVDLLAYLRAATPGLADRPLQLFPGRPDSGRRWF
                     WEKGCAGCHSIRGQGGGHAPDLALRERPLSLFQFAATLWNKAPAMLRVMRSQGIAVPQ
                     LDAGQMADLVAYLSDVQYFRPPGNAAAGRAVIETRGCLGCHSLDRRGASTGGDLAKAK
                     GLDSPAAVSAAMWNHGRLAPTTAAGLARWPRLTAPEVTDIATYFVSRGATR"
BASE COUNT          357 a          785 c          816 g          371 t
ORIGIN      
        1 gtgcagtaga ggaaatggtc ttgattctcg tggcgaacct tcccggggtg agtcaggccg
       61 aagaggtcca gttcgtcgtc gcggggcttc cgatccgcgg cggtcccact gggatcggcg
      121 ggggtagttg acgtggacat ctcgaacctc ccaatgctgc acaggtgatc gctcaaaggt
      181 atcgagccgg ggtgaacagc gggtgaatag gcggtgaaga gagaggcggc acgccactta
      241 caccggggat tcttttgccg catctgcacc gggtcaagat ccgggcccct gcccgcctcg
      301 tgcgtcgagg cggactgtca gcggcccgcg ctcgatctgt gtgtgaggtc atccgcgccc
      361 tcgcgcgcgc gccgccgggt aatagattcc cggagagcgc cgtggccttc acttggagtt
      421 cacggtggtt tcattggggt cgtgcctaac gtataaccag tccgccggac cgacctggca
      481 tcaccaggtg gaggagagtc gtatgcgaca cgcaccgcgt tgggctctcg gcgtcctgat
      541 ggccttggtg atggcttgcc aggagcgcgc tcaggagccc gttccaccgc cgccggcggt
      601 ctctccgacg tcgagcctcg cccggagcga tcaactgatc ctggtcacgg ccaaggtcgc
      661 cctcccgccc ggtgacgttc agcccggtga cctgccggag ccggcctcac ccgaagccgg
      721 gctgctggtc aagtactgct cccagtgcca cgactttccc accccgacga tgcacgccgc
      781 cgtggactgg ccccagatcg tccgccggat gtggctccgc atggaccggt tgcccgatac
      841 cctccaaatc cagatacccg agctggggga acgaatcgcg ttggtcaact acctggtcgc
      901 caacgcgctc cgggtcagcg gagccgtctt gcctccgggg ccggggcgcc aggagttctc
      961 gacgatatgc agtcggtgcc acgcgctccc ggatccgcga gctcacacag ccccagattg
     1021 gccgcaggtg ttcatgcgca tggagcggaa catggagcgc atgaaggtgc gcgccccggg
     1081 tcccgaggag agccgccaga tcgtcactta cctccaggcg aacggcgccc ggccttgacg
     1141 cgatcgagct ggagggtgag cgcgctcctg ctgctcaccc cactgtcgat gggatgggcc
     1201 cagcggccca ccgggtcgac ccagaacgcg ttggccggct cctgggtctt cggggccaag
     1261 ggctgcgcca actgccacgc gatcaacggc gtggggaaga ccgtcgggcc cgatctggga
     1321 cgcggcgagc tccgctccta ctccgacctc gcggcggctt tctggaatca ctacccccgc
     1381 atggcggccc ggatgcggga gcagggcatc caaccgccgc ggatcgggtc cgatgacatg
     1441 ggggatctga tcgccttcct gacctcggtc aactacttcg accctccggg aaacgcggag
     1501 cgggggaaga cgagcttcgc tcggaagcaa tgcgtccgtt gccaccagtt cgggggagcc
     1561 ggcggcgtgg tcgggcccga cctggaccaa ctgaagcagg tcggttctcc gatcgacatc
     1621 gcggcggcgc tgtggaacca cggccccgcg atgagccagg cgatgacggc gcgtgggatc
     1681 agccggccgt ccttcacggc ggcggagctg gtcgatctcc tcgcctacct gcgggccgct
     1741 acaccggggc tggcggaccg ccccctccag ctcttccccg gtcggcccga ttccgggcgg
     1801 cggtggttct gggagaaggg gtgcgccggg tgccacagca tccggggcca gggagggggc
     1861 cacgcgcccg atctcgccct gcgggaacgg cccttgagcc tcttccagtt cgccgcgacg
     1921 ctatggaaca aggcaccggc gatgctccgg gtgatgcgca gtcaggggat cgctgtcccc
     1981 caactcgatg ccggccagat ggccgacctc gtggcctacc tctcggatgt ccagtacttc
     2041 cgacctccgg ggaatgccgc ggccggccgg gcggtgatcg agaccagggg gtgcctgggc
     2101 tgccactcgc tggacaggcg aggggcgagc accggcggcg atctggcgaa ggccaagggg
     2161 ctcgactccc cggcggcggt aagcgccgct atgtggaacc acggccggct cgcgccgacg
     2221 accgcggcgg ggctcgcacg ctggcccagg ctgaccgccc cggaggtgac ggacatcgcc
     2281 acgtacttcg tgagtcgcgg ggccacacgg tgaggtccgg cggctcggg
//
LOCUS       DASWKS010000551         5910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1798146, whole genome shotgun sequence.
ACCESSION   DASWKS010000551 DASWKS010000000
VERSION     DASWKS010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5910
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798146"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..2854)
                     /locus_tag="VGA78_15705"
     CDS             complement(170..2854)
                     /locus_tag="VGA78_15705"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895374.1"
                     /translation="MGPLHRLFRLAIRRPETIAADVDDEIGLHLDLRTAELVAAGWSP
                     EQARAEAERLFGNPAAHRRQCTTIDQDHRNSMRRSDLIDTLRQDIAFSLRAFRRRPLF
                     TAAAIAILALGIGANTAVFSIVHGVLLRPLPFDTPDRLVMLRNRDPDGEFGVSELERI
                     RYGQETALFSSLGAWAFGTLTTSGSGDAERVRVMFADANALPTAGIQPALGRLFTAEE
                     DRPGADQVALISHNYWRTRLGETADVLGRTLTLNGEPRVVIGVLPPEARLPGDFTGPR
                     AELIVPLAPDPVPDPRNFHFLTAMARLRPGVTLEAANARFAAVARELVETVPPLPDDY
                     TVEVYPVAEEVTGQFRPAVLMLLWAVGLLLLLACANVAGLLLAHAESRRREFAVRAAL
                     GAAPGRLARQVVTESLMLGGLGGLVGTLLGYLAIRGLLAVSPPGLPRVNEVSLNPVVL
                     VFAVGASLLTALLFGLAPALTVRRREGQALLRGEGRGSTAGRERHLVRRGLVFAEITL
                     AVMLASGAGLVVRTWLNVVRTDPGFGVDQLLTFQLSLPGTPDPDREQRWRFYQNVVAE
                     LAQLPGVRAAGGVSALPLAQEAGDWGFRIEGRPPAPEGERHPFADRIIVTPGYFEAMR
                     VPLREGRLLSAGDDAASEPVVLLNQAVARRYWPEGNALGARIRLSSNVDTLWRRVVGI
                     VGDIRSRGLEADVRQEFYFPHAQYPTSPTEDAMGTLSLVLHTTGNPEAFAGSAREAVR
                     RLDAGIPLSQVRTMDNVLGTTLSVRRLQLLLLSFFAVSGLLLVAAGVYGVVASLVSER
                     SREFGVRLALGADRGSILRMVLGDGARMAALGAVAGVFGAIVLGHLLRSVLYGVKPRD
                     PVVLVLVPLLVLLVVLVATFGPARRAAATDPGPTLRAE"
     gene            complement(2858..3190)
                     /locus_tag="VGA78_15710"
     CDS             complement(2858..3190)
                     /locus_tag="VGA78_15710"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9895375.1"
                     /translation="MTQVDLLQGTLDLLLLKALSWGPMHGYEINRWIRDTTGEALSVE
                     EGALYPALHRLEARGWVASEWGLTEQNRRAKYYQLTKAGKEQCRRQASTWTRYVGVMA
                     RVLEARRG"
     gene            complement(3378..4862)
                     /locus_tag="VGA78_15715"
     CDS             complement(3378..4862)
                     /locus_tag="VGA78_15715"
                     /inference="COORDINATES: protein motif:HMM:NF037982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEX9895376.1"
                     /translation="MSRLPDTPSSPEARSGLPPWKVAELPVAPDPRGIRGWVGAVGPG
                     VILLGAAIGSGEFLLGPAVVVKHGLSLLWIAGCAVILQTLFNTELMRYTLATGEPVFT
                     GFMRTKPHSTFWGWVYSLLYLLQFGWPAWAGTAAGAAFFMGTKRLAQPSDAHLVYLCG
                     VGLYLVCVAVLLVGRRIERTLEILNWVLVTVVLSGLLILALLFAPGETWLAAAAGYAG
                     YDLAASRFEFVPTGADWFLLGAFAGFSGAGGVANITLANWARDKGYGMGQVAGFIPAA
                     IGGKKVNLAHTGYRFEPTAEAMVRWKGWWRLVRADQYGVFFVGAILGMLLPATLYVTF
                     LEPGRDIRGLGVAAELAHAIAGAKGPIFGGVVAVTAVWILFKTQLDLLEATVRSITDI
                     LWTGSARIRAFRGGDVRVIYYGVLFVAVAWGMIALRLAQPVFLLQLAANIGGLIFVLG
                     SLHLLYINTTLLPPALRPPLWRRVALVAMAVFYGVFATMWLASL"
     gene            complement(4859..>5910)
                     /locus_tag="VGA78_15720"
     CDS             complement(4859..>5910)
                     /locus_tag="VGA78_15720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895377.1"
                     /translation="LATDTLTGVTPLQRSRIPAAELAYIRGRAGMNRRTRAGVASAIA
                     EFEQAIRLDPSHVRALTDLSSAYALYMWYGYRGDLSSYSMAARSLALAERAIALAPDN
                     GDTYVARMYISNLSYAPLDSVRLDYQAAERLRPTSPNVLTWRASMLMREGRMADAMAL
                     AERALQTDPLSPPRRVSLAINALGARRYDLSLDQARRAETLEASLALARGLQGWSYLL
                     LGQPDRCVALDLVPYQGTRAACLVALGRRAEAQQLADSLQRALEQHALDPAYAEALAA
                     QELAIYYAWLKQPAQAGRWMKRAFELSPTGIDPRLIRSGLFDDVLRDADFASLVQSLP
                     AEAWTRVARDSRADQ"
BASE COUNT         1060 a         1992 c         2056 g          802 t
ORIGIN      
        1 atcgagcggt tgcgggagct gctcaagttc ccattctccc accatccggg cttcgaggaa
       61 tacagccgga gtgccccgga gtggggacgc gatttggtgg tgagctgttc cagttaacta
      121 cagtcgaaga ggtcgaaggc ggtcgaaggc ggtcgaagag ggttctccct tattctgcac
      181 gcagtgtcgg gccggggtca gtcgcggcgg cgcggcgggc ggggccgaag gtggcgacca
      241 gcacaaccag caggaccaga agcggcacca ggacgaggac cacggggtcc cgcggcttga
      301 caccgtagag aacgctccgg agcaggtggc cgagaacgat cgcgccgaat actccggcaa
      361 cagcgccaag tgcggccatc ctggcaccat ctcccagcac catccgcagg atggatcccc
      421 ggtcggcgcc caaggcgagg cgcacgccga attcgcggga ccgctcgctc accagggaag
      481 ccaccacgcc gtagacgccg gctgcgacca gcagcaggcc gctgaccgcg aagaagctca
      541 gcagcagtag ctgaagccgc cgtaccgaga gggtggtgcc caggacgttg tccatggtac
      601 gcacctgcga caacgggatg ccggcatcca gccgccggac tgcctcgcgg gccgatccgg
      661 cgaacgcctc ggggttcccg gtggtgtgga ggaccaggct caaggtgccc atcgcgtcct
      721 cggtgggaga tgtcgggtat tgcgcgtgcg ggaagtagaa ctcctggcgc acgtccgcct
      781 cgagcccgcg actccggata tcccccacga tcccgaccac ccggcgccac agtgtgtcga
      841 cattgctgga cagcctgatg cgggcgccca aggcattccc ctcgggccag tagcggcggg
      901 cgacggcctg gttgagcagc acgaccggct cactcgcggc gtcatccccc gcgctgagca
      961 aacgtccttc gcgcagcggc acccgcatcg cctcgaagta cccgggcgtt acgatgatcc
     1021 ggtcagcgaa gggatggcgc tcgccttccg gtgccggtgg acgtccttca atccggaatc
     1081 cccaatcgcc cgcctcctgt gccagcggga gggcactcac gccgccggcc gcccgtacgc
     1141 cgggcagctg ggccagctcc gccacgacgt tctggtagaa gcgccagcgc tgctcgcggt
     1201 cgggatcggg ggtacccggc agcgaaagct ggaacgtgag gagctggtcg accccgaagc
     1261 ccggatcggt ccgcaccacg ttgagccagg tccgcaccac caggccggcg cccgaggcga
     1321 gcatcaccgc caacgtgatc tcggcgaaga ccagcccccg ccgcaccaga tgacgctccc
     1381 ggccggcggt ggatccccgt ccctcgcccc ggagcagggc ctgcccttcg cggcgacgca
     1441 ccgtgagggc gggagccaat ccgaaaagca gcgcagtcaa gagcgatgcg ccgacggcga
     1501 agaccagcac caccggattg agtgagacct cgttgactcg gggcagtccg ggcgggctca
     1561 ccgccaacag cccccggatg gcgagatagc ccagcagggt gccgaccaga ccgcccagtc
     1621 cgcccagcat gagactctcc gtcacgacct ggcgggcgag acggcccggc gctgccccga
     1681 gcgctgcccg gaccgcgaac tcgcggcggc gtgattcggc atgcgccagg agcagtcccg
     1741 ccacgttggc gcaagcgagg agcaggagga gacccaccgc ccagagcagc atcaggaccg
     1801 cgggccggaa ctggccggtg acctcctcgg ccacgggata aacctccacc gtgtagtcat
     1861 ccggcagcgg cggcacggtt tcgaccagct cgcgcgccac tgcggcgaag cgcgcgttgg
     1921 cagcttccag ggtgacaccg gggcggagcc gcgccatggc cgtcaggaag tggaagttgc
     1981 gcggatccgg gacgggatcg ggagccaacg ggacgatcag ctcggcacga ggcccggtga
     2041 agtcacccgg cagccgtgcc tccggcggca gcaccccgat cacgacccgc ggctcaccgt
     2101 tgagcgtaag ggttcggccc aggacatccg cggtctcacc caatcgggtg cgccagtaat
     2161 tgtgggagat cagggcgacc tgatcggctc cgggccgatc ctcctcggca gtgaagagcc
     2221 ggcccagtgc cggctggatg ccggcagtgg gaagcgcgtt ggcgtccgcg aacatcactc
     2281 gaacccgctc ggcatcgccg ctgccgctgg tggtgagcgt gccgaaggcc caggctccga
     2341 gactgctgaa aagcgcggtc tcctggccat agcggatccg ctccagctcc gagaccccga
     2401 actcgccgtc cgggtcccgg tttcgcagca tgacgagacg atcgggagtg tcgaacggca
     2461 gcggccggag caggaccccg tgcacgatgc tgaacacggc ggtgttggcc ccgatgccga
     2521 gcgcgagaat cgcgatggcg gccgcggtga agagggggcg gcggcggaac gcgcgaagcg
     2581 aaaaggcgat gtcctgccgg agcgtatcga tcaaatcgga gcgtcgcatg gaattccggt
     2641 ggtcctggtc aatggtggtg cactgccgcc ggtgggccgc gggatttccg aagagccgtt
     2701 ccgcttcggc ccgcgcctgc tccggcgacc acccagccgc caccagctcg gcggtgcgga
     2761 gatcgagatg gagcccgatc tcatcgtcga catcggctgc gatggtttcg ggccgacgga
     2821 tcgctaggcg aaagagccgg tggagcggtc ccacccgtca gcctcgcctg gcctcgagga
     2881 cccgggccat gacccccacg taccgggtcc aggtcgacgc ctggcgccga cactgctcct
     2941 tcccggcctt ggtgagctgg tagtacttgg cccgccggtt ctgctccgtc aggccccact
     3001 cggaagcgac ccagccccgc gcctctaacc ggtgcagcgc gggatagagg gcgccctcct
     3061 caaccgaaag cgcttcaccg gtggtgtccc ggatccagcg gttgatctca tacccgtgca
     3121 tcggccccca ggagagggcc ttgagaagga ggagatcgag ggttccctgc agcagatcga
     3181 cctgggtcat gcccccttac cctaaacggc ttagggtaag tttgggcggc agcacggggg
     3241 aatgtcaagt aactgatggt cgaaggcggt cgaaggcggt cgaaggcggt cgaaggcggt
     3301 cgaatgaaac cgccagacaa gtatctcaac gccttcaact cccctcgacc gccttcgact
     3361 aattcgcccg ccttcgacta gagtgacgcc agccacatag tggcaaaaac gccatagaag
     3421 accgccatcg cgactagggc cacccgtcgc cagaggggag gccgcagggc cgggggcagc
     3481 agggtggtgt tgatgtagag tagatgcagt gagccgagga cgaagatcag gcccccgatg
     3541 ttggcggcga gctgcagcag gaagaccggt tgggccagcc gcagcgcgat catcccccac
     3601 gccaccgcga caaagagcac gccgtagtag atcacccgca catcaccgcc ccgaaaggcg
     3661 cggatccggg cactcccggt ccagagaatg tcggtgatcg accgcaccgt cgcctccagc
     3721 aggtcgagct gggtcttgaa caggatccac accgcggtga cggcgaccac accaccgaag
     3781 atcggtcctt tggccccggc gatcgcgtgc gccagctcgg ccgccacacc cagtccccgg
     3841 atgtcgcgtc ccggctccag aaacgtcacg tacagggttg cgggcagcag catgcccaga
     3901 atggcgccga cgaagaagac cccgtactga tcggcccgca ctaatcgcca ccagcccttc
     3961 cagcgcacca tcgcctcagc ggtgggctcg aagcggtagc cggtatgagc caggttcacc
     4021 ttcttgccac cgatcgccgc ggggatgaag ccggccacct gtcccatgcc gtagcccttg
     4081 tcacgggccc aattggcgag ggtgatgttg gccacacctc cggcgcccga aaagccggcg
     4141 aacgcgccca gcaggaacca gtctgcgccg gttgggacga actcgaaccg ggacgcagcc
     4201 agatcgtatc ccgcgtatcc cgccgccgcg gcgagccagg tttcgcccgg cgcgaacagc
     4261 aacgccagga tcaagagccc gctcagaacg acggtcacca gcacccagtt caggatctcg
     4321 agggtccgct cgatccgtcg tccgaccagc aggacggcca cacacaccag gtagagtccc
     4381 acaccgcaca ggtataccag gtgcgcgtcg gagggttggg ccaggcgctt ggtccccatg
     4441 aaaaacgcgg ctcccgcggc ggtcccggcc caggcgggcc agccgaactg cagcaggtac
     4501 aggagggagt acacccagcc ccagaacgtc gaatggggtt tggtccgcat gaagccggtg
     4561 aagaccggct ccccggtggc cagggtgtac cgcatcagct cggtgttgaa cagagtctgc
     4621 aggattacgg cgcagccggc gatccagagc agactgagtc cgtgtttcac caccaccgcc
     4681 gggcccagca ggaactcgcc gctgccgatg gcggcgccca gcagaattac gccggggccg
     4741 accgcgccga cccagccgcg aatcccgcgc gggtcgggag cgaccggcag ctcggcgacc
     4801 ttccagggtg gcagacccga gcgggcttcg ggactgctgg gcgtgtcggg gagtcggctc
     4861 actgatcggc gcggctgtcg cgtgctaccc gggtccaggc ttcggcggga agcgattgca
     4921 ccagagaggc gaagtcggcg tcgcgcagga catcgtcgaa gaggccggat cgaatcagcc
     4981 ggggatcgat cccggtgggt gacagctcga aggcccgctt catccagcgc ccggcttggg
     5041 cgggctgctt gagccaggcg tagtagatcg ccagctcctg ggccgcgagg gcctcggcgt
     5101 aggccggatc gagggcgtgc tgctccaggg cccgctgcag cgagtcggcc agctgctgcg
     5161 cttcggctcg ccggcccaac gcgaccaggc aggcggcccg ggttccctga taggggacca
     5221 ggtcgagggc cacgcagcgg tccggctggc ccagcaacag gtaggaccag ccttgcagtc
     5281 cccgggccag cgccagactc gcctccaggg tctcggcgcg ccgggcctga tcgagcgaga
     5341 gatcgtagcg gcgggccccc agggcgttga tggcgaggga tacccggcgg ggcggggaca
     5401 gcgggtcggt ctggagggcc cgctcggcca gcgccatggc gtcggccatc cggccttccc
     5461 gcatcagcat gctggcccgc caggtgagga cgttaggcga ggtgggccgc agccgttcgg
     5521 cggcctgata gtccagccgg acgctgtcaa ggggggcgta gctcaggttg gagatgtaca
     5581 tccgcgccac ataggtgtcg ccgttgtcgg gcgccagcgc gatggcacgc tcggccaggg
     5641 ccagtgagcg agcggccatg gagtaggagg agagatcgcc ccggtagccg taccacatgt
     5701 agagagcgta ggccgaggac aggtcggtca gggcccggac gtgggaggga tcgagtcgga
     5761 tggcctgctc gaactcggcg atcgccgagg cgacacccgc tcgggtacgc cggttcatcc
     5821 cggcccggcc gcggatatac gccagctcgg ccgcgggaat ccgggatcgt tgcaggggag
     5881 tgacccccgt cagggtatcg gtggccagca
//
LOCUS       DASWKS010000552        17425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1798471, whole genome shotgun sequence.
ACCESSION   DASWKS010000552 DASWKS010000000
VERSION     DASWKS010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17425
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798471"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1601
                     /locus_tag="VGA78_15725"
     CDS             <1..1601
                     /locus_tag="VGA78_15725"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX9895378.1"
                     /translation="NRPEWAYADFAILTARCTDVPIYSTLPAAQIEGLLRDSGAVAVM
                     VSNRTQLEKIKQIRGNLPALAHVIVFDDGVEDPDVLPLRRLMTTGRTMAAQYVRWRDQ
                     ALQTTPDDLATIIYTSGTTGEPKGVMLTHGNIASNVRACAGVLDVRDSDESLSFLPLS
                     HIFERTGGHYVMIHIGVMINYARNVDTVAADLVDRAPTVLTAVPRMYEKIYEKVMDQV
                     HAGGPRRMRIFRWARATGDAWADLKLAGRRVPLGLQLKYRLADRLVFQKLRQGTGGRL
                     RCSISGGAPLNPDIARFFYAAGMPILEGYGLTETSPVIAINTFAAQRIGSVGRPVPGV
                     EVRIAEDGEILTRGPHVMKGYYRKPDATAEVLSPDGWFHTGDIGRVDQDGFLFITDRK
                     KDLIVTAGGKNIAPQPIEGRLKTNPLFANAVMLGDKRKYPILLLVPNFERLRGWARAE
                     GLTFADDAALVALPAVQTKMELEAKKHLRDLAQFEVPKKFLVLPRDFSIERGELTPKL
                     SVRRKVVEQNYQAEIAALYNGSEG"
     gene            complement(1672..2253)
                     /locus_tag="VGA78_15730"
     CDS             complement(1672..2253)
                     /locus_tag="VGA78_15730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895379.1"
                     /translation="MFIELTDHLRCPADHDEAYLVLLPDRSVGRDVVAGHLGCPVCGW
                     NTSFTQGQVDFGGGTPASGDTALSPEAVHAFLGLGGPGGFVALVGAATGLIPDLVPVL
                     RGIHLVAINPAFQVGEGFPGSVLRSAILPLKRGSMRGVVLGADVASDAGWVRQAARAT
                     LPGLRICGEGPAPDLAEVEVLASSARAWVAKNK"
     gene            complement(2254..2946)
                     /locus_tag="VGA78_15735"
     CDS             complement(2254..2946)
                     /locus_tag="VGA78_15735"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9895380.1"
                     /translation="MPLAGKVAVVTGASRGIGAAIAARLSTEGATVIRLARTLRAARH
                     DRALDLPCDLTQEEDVGHAADRILGEFGAPDIVVSNAGSFLLARLEQTTAQDLDFQLA
                     VNLRAPFLVARAFLPPMREAGRGHHVAVGSVADHVPFPENAAYAASKFGLRGLHEVLR
                     EEYRGTGVRFTLVSPGPTDTSVWDPVKPDQRPGLVPRRDMLQVDDVADAVAFVTSRPS
                     RVTVDWIRLGPA"
     gene            complement(2946..3533)
                     /gene="folE"
                     /locus_tag="VGA78_15740"
     CDS             complement(2946..3533)
                     /gene="folE"
                     /locus_tag="VGA78_15740"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEX9895381.1"
                     /translation="MKANEPEGADGFQSEVRKMLVVLGEDPERQGLRRTPMRVEAALR
                     WLTRGYRHTVAEVVGKAIFEEAHENMILVRDIELYSLCEHHMLPFFGRAHVAYLPAGR
                     IVGLSKIPRIVEVFARRLQVQERLTDQIADALMDVLQPLGAGVVIEASHLCMMMRGVE
                     KQNSRTVTSALRGVFRDDPKTRAEFLRLVHWDPPS"
     gene            complement(3520..3933)
                     /locus_tag="VGA78_15745"
     CDS             complement(3520..3933)
                     /locus_tag="VGA78_15745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX9895382.1"
                     /translation="MPRATIVRRLHFNAAHRLHNPAQSDAWNAQTFGPCNNPNFHGHN
                     YELEVMVEGEIDPDTGYVLDVAELKRIVEEQVLGRLDHRNLNLDVPWFATHIPSAENI
                     AVYIWNSLHGQLPRGRLRRVRLWETPRNWVDYEGE"
     gene            complement(4204..4368)
                     /locus_tag="VGA78_15750"
     CDS             complement(4204..4368)
                     /locus_tag="VGA78_15750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895383.1"
                     /translation="MPLMLLGLLLLLIWGIFTFITPAGLGIVHLLLAAGILLLIRGWV
                     AWDARLATKD"
     gene            complement(4412..5383)
                     /locus_tag="VGA78_15755"
     CDS             complement(4412..5383)
                     /locus_tag="VGA78_15755"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9895384.1"
                     /translation="MPRPDVELQGPERATLEDIEAVNRLFADAFTDRYHRDGMTGVRV
                     PYLNRDIWRYAIEDAGEGAKLWRDAEGHLAAFNMVHQSGAEGWMGPLAVRPALQGSGV
                     GTLVVHAGINWLKRKGARIIGLETMPRTVENIGFYSRLGFVPGHLTVSVTKELNPRPA
                     AVGLPGRRLSRTGSERIGRLAACRALTAALAPGVDYQRELLLTEELKLGDTTMLDGQD
                     GGVLGFALWHSAPLAHGRAGEEFRVLKIAARDLPAFRALLETLERDAADLKAHRISLR
                     CQTAFSEAYAALLDAGYRVHWTDLRMTLPGATERITGPGIVMSNWEI"
     gene            complement(5370..7790)
                     /locus_tag="VGA78_15760"
     CDS             complement(5370..7790)
                     /locus_tag="VGA78_15760"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HEX9895385.1"
                     /translation="MQVHRLRLVNFRQHEDTDLRFDVGLTGVVGPNGSGKTTLLEGLA
                     WAIYGTKAARGAVDGIRRRNAPPRARVEASVEFTLGAHHYRVVRTLHGAELYQDGDAQ
                     PIANSASAVTERLGRILGMSHDEFFNTYFTGQKELAIMGSMKPIEREKFLSRVLGYER
                     LAAAQKRLALERSALRAQLQAIESILVSPAVLAEEESSAAERLDGALQSARRAADGLQ
                     AAEGELTRLRPAWDAMQQLHEQVLSLESDLRVAEQQVTDGRDAFTRLDRELAEALTSQ
                     QRLEELRPHLIPLPALVEERDRLDALAARVAKQRETQGQITELRRRLTAIDQSLVAMA
                     TPESVALLRQQLKGLQAALVEAEQLAERRRTSWVRDKQDAETKAAQLQDQGEDLNRQL
                     AALRKAGPVGACPVCNRPLKKSYDDVLRDLEAQIEELRVNWKFYQSRLKQLARQPKEV
                     GDAAKARDQLQRDAQRLSSELARAETTEQSRVVLSAERESHLVRLAELEGGLAAGTVD
                     YEEDRHAAVRSRLEHLEPIRMEVERLSGVSDRAARLATDAAVAEAELTLRENRVITLR
                     HTLQQSGWSPEAFAAARAALEVADQRRQQAQLAVVRSAGEVENARAEVARAAQRRAER
                     ERQAAEARQVEGKLLMNQELDRAFADLRTDLNSALRPDLSDLGSRFLRDLTMGRYSEF
                     ELDEDYTPTIVEDGEPQKVLSGGEEDVVSLALRLAISQMIAERAGQPLSLLVLDEIFG
                     SLDEDRRTAVMDLLRRLADQFPQVILITHIDTVRDGFDRVLRLTYDVERGVARVHEEH
                     DRGRDAAA"
     gene            complement(7790..8965)
                     /locus_tag="VGA78_15765"
     CDS             complement(7790..8965)
                     /locus_tag="VGA78_15765"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX9895386.1"
                     /translation="MKIAHLADVHLGFRQFHRLTPLGINQREADVANAFRLAVDGIIT
                     ARPDAVLLAGDLFHAVRPTNAAIIFAFRQFQRLREALPEAPIVVIAGNHDTPRSSETG
                     SILKLYEEVGVDVALDQPRRMAWPDLGLSVLAVPHHALRGAERPALHPEGAERHQLLL
                     LHGEIEGVYPPEISGAAWGGLVLPLASLHPGEWSWVGLGHYHVQHEVEPRVWYSGSLE
                     YVTSNPWGELRDERRHGHTGKGWLLLDLAAGTATRMPVRGARRVIDLPPLYGDGQTAE
                     DLDRLIRERLATIEGGPADQIVRQLVFNVPREIARSIDHAAVRSVKAEALHFQLDLRR
                     PDSSGGLGLDPGGRRKPLAELLRDYLSGRPLPAELDRAAFVRGGVELLEAVVREEDS"
     gene            complement(9000..10931)
                     /locus_tag="VGA78_15770"
     CDS             complement(9000..10931)
                     /locus_tag="VGA78_15770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895387.1"
                     /translation="MAHEPIGRVVATEQKPSTPHQFFFWTGRETPIGIGAIVRVEGEG
                     RVIYGVVTDGFAYSDLASPLHAVLGADGNPSAAPEPTDRTEIRLYAASVLRQTPEEPL
                     QPVPLGVVFAAEDADVAAALRMDGFLTGDDPTGIPVGLYRAGGLEAPVYLDAEFLLGP
                     EAAHLNITGVSGLATKTSAITFLLSSIFQTWPAHKGSVAAVCFNVKGPDLMFLDQPCD
                     LDQEDRRLYQRLGLVPQPFGNLRCYAPYKPDGVNLNTLRTNEALSGNTEPLVWGLREV
                     LDYAEVLLNRDDIDAKADAFIDFLAERVVGREFVDRSLRESPFLVRSFADLDQFFRAI
                     FDFMEALGKGGEVWRTHHIATIRKVRNRLSNISTRSKGLVTDDGEINDLPWGGFTDRS
                     VSVLDLAGVDPLAQDLVFARVVSKLREHLERRDLGVDHVIVVVDELNKYAPADGQDTY
                     VRRMLLDLSERGRYLGLVLFSAQQFRSQVHRRVVGNAGTAVYGRMDSDELAMPVYATL
                     SPATKAKLAGMPKGELMVRHPHFTHPIFVRFPRPASLGGRDGVVRFPPAAEVPFIQAV
                     ARRLRSLDPSLSTAKVLALVDGRQEEDVRRALHATERARPGEPLSYFRSCLGKAVATE
                     TRQMRPVLGVKTSDDPYAP"
     gene            complement(10934..11860)
                     /locus_tag="VGA78_15775"
     CDS             complement(10934..11860)
                     /locus_tag="VGA78_15775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895388.1"
                     /translation="MPFDDLRRTLTRAGFSTATARPPGSRGRTEEATIRPASLIEHPT
                     VRALDVGPPQPCPEPIAFLDGIQHHQVVGYHGTFPLVAGIASAAVRERQDRRLTTVVE
                     ASRRLVIGRRSALERVPDWLAPYQSVVLDEDDEQHPVREIDRAVAKIDDARSALKLQV
                     GRAYRQRSDGWIIVDGSLAASTDFAEDRRMLGVSRSHATLPFRGDDLGTYLALPEGHR
                     SSVFEPASLRFTPVYAWGLRLWPWQGRDLLFGLVRVEAARRPETLEQADRWSRWVLAE
                     RAPVSAPDGRWDRLLYGIHNVEDYLRSRLPAR"
     gene            complement(11872..12354)
                     /locus_tag="VGA78_15780"
     CDS             complement(11872..12354)
                     /locus_tag="VGA78_15780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895389.1"
                     /translation="MLATAIMPGLTVFPQLAWRWESETDILSGSYRTPRRGETAETVE
                     LSSPDGAVAVLDVVENEICGLDIVIWPDVETVSGLRPPAPQMAGKVGLPPPSGPRQIE
                     EPLAVTVDGLEQTFHLRIGPERPVTVVQVADHLLIEVDASDQLAGFWLTGVPPFPSEE
                     "
     gene            complement(12367..13572)
                     /locus_tag="VGA78_15785"
     CDS             complement(12367..13572)
                     /locus_tag="VGA78_15785"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX9895390.1"
                     /translation="MPDRLSSNLAQLKASETVAVSAEARRRKAAGEDVLDLGVGEPDF
                     DTPSAAAQAGIAAIQQGKTHYPPNSGIPELRRAVAQNLSALSSGRPVDPDRIIISTGS
                     KQSLFNACFALFGPKDKVLVPSPAWVSYPQIVHLARAEPVMVPGDVEWGLKVSVRDLE
                     RRTDKLVRGLILCSPCNPTGAVYTRTEIEAIATWARANQVWILADEIYRRINYGGAHA
                     PSFLDLPDELLERLVVITGASKAYAMTGWRIGAALAPPHLVQAMAALQSHTTTGANHP
                     AQWAAVTAYSDPRVEQDVVRMVAAFRRRRDRIVSRFRSEAPGIEFVEPHGAFYFFFRV
                     DGIAPGLGGQAFCTRLMQEEGVALVPGGAFGDDRWARLSYAVSEADLEAALERLLPFI
                     MRLGASQAA"
     gene            13649..15013
                     /locus_tag="VGA78_15790"
     CDS             13649..15013
                     /locus_tag="VGA78_15790"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HEX9895391.1"
                     /translation="MSLLSSLGWEAASPAVRDVVPSITRGNNLVVVVPPAPVYVTPTL
                     AGLIERRAESGHGILVIAPAPGLGEWGALLASLTAGLTPPPLLALGPRQAERFLRPGT
                     GASVLVASPATAVTLRQRSLIQTERIGSVLIAWPELWDDADALTLVLQDLPHEVQRVI
                     VTADLGAVAPLVERHAWRAMTVGMASPLPEPAGPVMVVEVPWGSRADALPALAERLNV
                     DSLAVWTADSSRHEELRRVLAGIGSSISLQVGKPAPAAQIIAFDPPTPDRLVELLQAG
                     GVTLLAPPGTERWIARIAAPRQSLVLSGALDASNVELARRRALIERAVRDESLDEGFL
                     ALAPVFDQQDPASVAAALYQMWTRLPRPALAKQLEASTAAAPRSRIWVGAGKRDEVGV
                     GDLVGLLINELRMERSAIGKIELRDTFALVEVPAPEADRIVQALSGRTLRKRRLVARV
                     DRKP"
     gene            complement(15101..15394)
                     /locus_tag="VGA78_15795"
     CDS             complement(15101..15394)
                     /locus_tag="VGA78_15795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003215863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX9895392.1"
                     /translation="MNKQDLVEVVAKKLDTSKAQAGEIVDLFFAADGIIAGELKKGGR
                     VQVTGFGNFVTRKRGARAGRNPQTGAAIKIKASTAPVFRAGKGLKDVVNRGKK"
     gene            15593..16198
                     /locus_tag="VGA78_15800"
     CDS             15593..16198
                     /locus_tag="VGA78_15800"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEX9895393.1"
                     /translation="MIHGPRTGSIEVIAGVMFSGKSEELLRRVRRAQIARRRVQVFKS
                     HLDERYAGLKLVSSHDGRSLEAVAVGTAAELSRLIRPETEIVAIDEAQFLDDAVVDVS
                     TSLANRGVRVIVAGTDTDFRGEPFGAMAQLMAVAETVDKLRAICMVCGDLACRNQRLI
                     DGRPAPYDSPIILVGGSDAYEARCRHCHRVPHRDEDQTALL"
     gene            16242..16853
                     /gene="coaE"
                     /locus_tag="VGA78_15805"
     CDS             16242..16853
                     /gene="coaE"
                     /locus_tag="VGA78_15805"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEX9895394.1"
                     /translation="MLSVALTGNIASGKTTVLNLFQSWGAFTTDADAMVRELQRPGTP
                     VFDAIVRRFGPPVVASDGSLDRGALRRIVLEDPAARADLEALVHPAVHERRAQALAQA
                     RASGVPVSVHDIPLLFEAADPSEFDRIVLVEASPARRREWLIQRRGLSPAEADRMIGA
                     QLPSPVKRARSHYVIENDADLATLGQRARVVWDQLISEATRSA"
     gene            16908..17297
                     /gene="gcvH"
                     /locus_tag="VGA78_15810"
     CDS             16908..17297
                     /gene="gcvH"
                     /locus_tag="VGA78_15810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX9895395.1"
                     /translation="MAQVPDDLRYTSDHEYARAAAEAGVYVIGITDYAQGELGDVVFV
                     NLPKVGEKLGAHQVFGTIEAVKAVADLYAPVAGTVVEINPGLDSDPAVVNRDPYGDGW
                     MIKLRADNRADVDGLLSPDAYQAHIGA"
BASE COUNT         2896 a         5998 c         5744 g         2787 t
ORIGIN      
        1 agaaccggcc cgaatgggcc tacgccgatt tcgccatact tacggcccga tgtaccgatg
       61 tccccatcta ctccaccctg ccggccgccc agatcgaggg actgctgcgc gattccggag
      121 cggtagcggt gatggtctcc aaccggaccc agctggagaa gatcaagcag atcagaggca
      181 accttcccgc gctggcccat gtcatcgtgt tcgacgacgg ggtagaagac ccggacgtcc
      241 tgccgctccg ccgcctgatg acgacggggc ggaccatggc ggcgcagtac gtccggtggc
      301 gggaccaggc tctgcagacc acgcccgacg atctggcgac gatcatctat acctcgggca
      361 ccacgggcga gcccaaaggc gtcatgctca cgcacggcaa catcgcttcc aatgtccggg
      421 cctgcgccgg cgtactcgac gtgcgcgaca gcgatgagag cctgtcgttc ctgccgctgt
      481 cgcacatctt cgaacggacc ggcggccact atgtcatgat tcatatcggg gtgatgatca
      541 actatgcccg gaacgtcgac acggtagcag ccgacctggt cgatcgcgcc cccacggtcc
      601 tgaccgccgt gccccgaatg tatgagaaga tctacgaaaa ggtgatggac caggtccacg
      661 ccggtggtcc ccgccggatg cggatcttcc gctgggcccg ggccaccggc gacgcgtggg
      721 cagacctcaa actggccggg cggcgggtcc cgctcggtct ccagctcaag tatcgcctgg
      781 ccgatcggct ggtcttccag aagctgcgcc aaggtaccgg cggacgactg cggtgttcca
      841 tctcgggagg ggctccgctc aatcccgaca tcgcccgttt cttctacgcg gccggcatgc
      901 cgatcctgga gggttacggc ctgaccgaga cctcgccggt catcgccatc aataccttcg
      961 ccgcccagcg gatcgggtcg gtcggccggc cggttcctgg cgtggaagtg cgcatcgccg
     1021 aagacggcga gatcctcacc cgcggtcccc acgtgatgaa gggctactac cggaagcccg
     1081 acgccaccgc cgaagtgctc tcgcccgacg ggtggtttca taccggcgac atcggccggg
     1141 tcgaccagga cggtttcctg ttcatcaccg accggaagaa ggacctcatc gtcaccgcgg
     1201 gcggaaagaa catcgcgccg cagcccatcg agggtcggct caagaccaac ccgctgttcg
     1261 ccaacgcggt gatgctgggg gacaagcgca agtatccgat cctcctgctg gtcccgaact
     1321 tcgagaggct cagaggctgg gcccgggccg aagggctcac ctttgcggac gatgccgcgc
     1381 tggtggcact ccccgcggtc cagaccaaga tggagttgga ggccaagaaa cacctgcgcg
     1441 acctggccca gttcgaggtg cccaagaagt tcctggtcct gccccgggac ttctcgatcg
     1501 agcggggcga gctgaccccc aagctgtcgg tgcggaggaa agtggtggag cagaactacc
     1561 aggcggagat cgcggcgctc tataacggca gtgaggggtg acgcgtgacg attgacgatt
     1621 gacgattgaa tgcgcagacc gccgcgagaa gcaatcatca atcatcaatt gtcatttgtt
     1681 cttggcaacc cacgcccttg cgctgctcgc cagcacctcg acctcggcca gatcgggcgc
     1741 cggtccttca ccgcagatcc ggagtccggg caaggtggcg cgcgcggcct gccgcaccca
     1801 gcctgcatcc gaggccacat ccgcccccag gaccacccca cgcatggaac cgcgcttgag
     1861 cggcaggatg gcgctccgga gcacgctgcc ggggaacccc tcgcccacct ggaaggccgg
     1921 gttgatggca accaggtgga tgccgcggag gacgggtacc agatcgggga tcagtccggt
     1981 ggctgctccc accagcgcca cgaacccccc cggaccaccc agacccagga acgcatgcac
     2041 cgcctccggc gagagggcgg tgtcgcccga ggcgggtgtg ccgccgccga aatccacctg
     2101 accctgagtg aatgacgtat tccacccgca taccggacag cccagatgcc cggcgaccac
     2161 atcgcgtccc acactccggt ccggcagcag gaccaggtag gcttcgtcat gatcggcggg
     2221 acagcggaga tgatcggtga gctcgatgaa cattcacgcc ggacccaggc gaatccagtc
     2281 gaccgtcacc cgggacgggc gggaggtcac gaatgccacg gcatcggcga catcgtccac
     2341 ctgcaacatg tcccggcggg gcaccagacc gggacgctgg tccggcttga cggggtccca
     2401 cacgctggtg tcggtcggtc cgggtgagac cagggtaaag cggaccccgg tcccgcggta
     2461 ttcctcccgt agcacttcgt gcaggccgcg caggccgaac ttcgaggcgg cgtaggcggc
     2521 gttctcggga aacggcacat gatcggcgac gctgcctacc gccacatggt ggccccgtcc
     2581 ggcttcccgc atgggcggca ggaaggcccg ggccaccaga aacggcgccc ggagattgac
     2641 cgccagctga aagtccaggt cctgcgccgt ggtctgctcc agccgggcga ggagaaagga
     2701 gccggcgttg ctcactacga tgtcgggcgc gccgaactca cccaggatcc gatccgcggc
     2761 gtggcccacg tcttcttcct gggtcaggtc gcagggcaga tcgagggcgc gatcgtgccg
     2821 ggccgcccgc agggtgcggg ccagccggat caccgtcgcc ccttcggtac tcaaccgcgc
     2881 ggcgatcgcg gccccgatgc cgcgcgacgc accggtcacc accgcgactt tgccggccag
     2941 cggcatcacg acggtgggtc ccagtggacc agccgcagga actcggcccg ggtcttggga
     3001 tcgtcccgga agacgccccg caacgcgctg gtgacggtgc gggaattctg cttctccact
     3061 cctcgcatca tcatgcacag gtgggacgcc tcgatcacca caccggcccc aagcggctgg
     3121 agtacgtcca tcagggcgtc ggcgatctgg tcggtcaggc gctcctgcac ctgaagccgg
     3181 cgggcgaaca cctcgacgat gcgggggatc ttcgagagac ccacgattcg tccggccggc
     3241 agatacgcga cgtgggcccg gccgaagaac gggagcatgt ggtgctcgca cagggagtag
     3301 agctcgatgt cccgcaccag gatcatgttc tcgtgggctt cctcgaagat cgccttgccc
     3361 accacttcgg cgacggtatg gcgatatccc cgggtgagcc accgcaaggc ggcttcgacc
     3421 cgcatgggag tccggcggag accctgccgt tccggatctt cccccagcac caccagcatc
     3481 ttgcggacct cgctctgaaa gccgtccgcc ccctcgggct cattcgcctt catagtcgac
     3541 ccagttgcgc ggggtttccc acagccggac ccggcggagc cgtccgcggg gcagttggcc
     3601 atggagactg ttccagatgt acaccgcgat gttctccgca gagggaatgt gagtcgcaaa
     3661 ccagggaacg tcgaggttca agttccggtg atcgagccgg cccaggacct gctcctccac
     3721 aatccgcttg agctcggcca cgtccagcac gtacccggtg tcagggtcga tttcaccctc
     3781 caccatgacc tcgagctcat aattatgccc atgaaaattg ggattgttgc agggcccgaa
     3841 ggtctgggcg ttccaggcgt ccgactgcgc cggattgtgc aggcggtggg cggcgttgaa
     3901 atgcagccgg cggacaatag tggcgcgtgg catcgatggg tccaggtggc cgggaaaacg
     3961 aaggcgccgg cactcgaaag tgctcggcgc ccaaggtcga acgacgacag cgaggattat
     4021 tgaagcccga cagtaagtct cggcgccctc tccggaactt ctaccttccc ctgatgggca
     4081 tggcatacgc cccggaatct gggcccgcta tcggacttgt tggctcaata atttggtctc
     4141 gctgccgacg cccgacgctg tagaatctac caaatgcccg ggatcctcgc cagtcacgcg
     4201 ccgctagtcc ttcgtcgcca gtcgcgcatc ccaagccacc catcctcgga tcagcagcag
     4261 gatgccagcg gcgagcagca agtgtacgat tcccaacccg gccggcgtaa tgaaggtgaa
     4321 gatcccccag atcagaagga gcagcagacc aagcaacatc agcggcacag cacctccgcg
     4381 gtaatcttgc gaggattgac cagcacccga cttagatctc ccaattcgac atgacgatcc
     4441 cggggcccgt aatccgctca gtcgcgcccg ggagggtcat ccgcagatcg gtccagtgga
     4501 cccgatatcc ggcgtccagc agcgccgcgt atgcctcgct gaacgccgtc tggcagcgga
     4561 ggctgatgcg gtgcgccttc aggtccgccg catcgcgctc cagcgtctcc aacagcgcgc
     4621 ggaaggcggg cagatcccgg gcggcgatct tgagaacccg gaactcctcg ccggcgcggc
     4681 catgcgccag cggggccgag tgccagagcg cgaatcccag cacccctccg tcctgaccgt
     4741 ccagcatggt cgtatcgccc agcttgagct cctcggtgag cagcagctca cgctggtagt
     4801 cgaccccggg cgccagggcg gcggtcagcg cgcgacaggc ggccaaccgg ccgatgcgct
     4861 cgctcccggt ccgcgacagc cgccggcccg gcagccctac ggcggccggc cgcgggttga
     4921 gctccttggt cacactgacg gtcaggtggc cgggcacgaa ccccagccgg ctgtagaacc
     4981 cgatgttctc caccgtgcga ggcatggttt cgagaccgat aatgcgagcc cctttgcgtt
     5041 tgagccagtt gatgccggcg tggaccacca gcgtgcccac gccgctcccc tgaagcgcgg
     5101 gccggacggc gagcggcccc atccatcctt cggcgcccga ctgatggacc atgttgaacg
     5161 cggccagatg gccttcggca tcacgccaca gcttggcgcc ttcaccggcg tcttcgatgg
     5221 catagcgcca gatgtcgcgg ttgagatacg gcacccggac cccggtcatg ccgtcccggt
     5281 gatagcggtc ggtgaaggcg tcggcgaaca gccggttcac cgcctcgata tcctcgagcg
     5341 tggcccgctc cggaccctgc agctcgacgt caggccgcgg catcgcgccc tcggtcgtgc
     5401 tcctcgtgca cccgcgccac gccccgctcc acgtcgtagg tgagccgcag cacccggtcg
     5461 aagccgtcgc ggacggtatc gatatgggta atgagaatca cctgggggaa ttggtcggcc
     5521 agccggcgga gcaggtccat cacggccgtc cggcggtcct catccagcga cccgaatatt
     5581 tcatccagca ccagcagcga gagcggctgg ccggcccgct cggcgatcat ctggctgatg
     5641 gccaaccgca gcgccaggct cacgacgtcc tcttctcccc cggaaagcac cttctgcggc
     5701 tcgccgtcct cgacgatggt cggggtgtag tcctcgtcca gctcgaattc gctgtagcga
     5761 cccatggtca gatcgcgcag gaagcgcgag cccaggtcgg agaggtcggg acgcagcgcg
     5821 ctgttgagat cggtacgaag atcggcaaag gcccggtcca gctcctgatt catgagcagc
     5881 tttccctcca cctgcctggc ttccgcggcc tgccgctccc gctcggcccg gcgctgggcc
     5941 gcccgcgcca cctcggccct ggcgttctcg acctcgcccg ccgacctgac caccgccagc
     6001 tgggcctgtt gccgccgctg atcagccacc tccagggccg cgcgagccgc ggcaaaggcc
     6061 tcgggcgacc agcccgattg ctgcagcgta tgacgcagcg tgatgacccg gttctcccga
     6121 agggtgagct ccgcttccgc cacggcggcg tcggtggcca gccgggccgc gcgatccgac
     6181 accccgctca agcgttcgac ctccatgcga atcggttcca ggtgctccag ccgggaccgg
     6241 accgcggcgt gacggtcctc ctcgtagtcg accgtaccgg cggccagccc cccttccagc
     6301 tcggccagcc ggaccaggtg actttcccgc tcggccgaca gcaccactcg gctttgttcc
     6361 gtggtttcgg cccgcgccag ctcactggag agccgctggg cgtcgcgctg gagctggtcg
     6421 cgcgccttgg ccgcgtcacc gacctccttg ggctggcggg cgagctgctt gagccgggac
     6481 tggtagaact tccagttcac ccgtagctcc tcgatctggg cttccagatc gcgcagcaca
     6541 tcgtcgtagc tcttcttgag gggccggttg cacaccggac aggcgccgac cggtccggcc
     6601 ttgcggagcg ccgccaactg gcggttgagg tcctccccct gatcctgcag ctgggcggcc
     6661 ttggtctcgg cgtcctgctt gtccctgacc cagctggtgc gccggcgctc ggccagctgt
     6721 tcggcttcca ccagcgcagc ctggagccct ttcagctgct gccgcaggag cgccaccgat
     6781 tcaggcgtcg ccatcgcgac caggctctgg tcgatcgcgg tcaggcggcg tcgcagctcg
     6841 gtgatttggc cctgggtttc ccgctgcttg gcgactcgag cggccagggc atcgagccgg
     6901 tcgcgctcct ctaccagagc aggtagcggg atcaggtggg gccgaagctc ctccaggcgc
     6961 tgctggctgg tgagtgcctc ggccaactcc cgatccagcc tggtgaaggc gtcgcgacca
     7021 tcggtcacct gctgctcggc cacccgcaag tcactctcga gggacaggac ctgctcgtgc
     7081 agctgctgca tcgcgtccca ggccgggcgc aggcgggtca gttcgccttc ggccgcctgc
     7141 aacccgtccg cggcccggcg ggctgactgt agagcaccgt ccagccgctc cgcggccgag
     7201 gattcctcct ccgccaggac ggcggggctg accagaatcg actcgatggc ctgcagctga
     7261 gcccggaggg cgcttcgctc cagcgccagc cgcttctgag ctgccgccaa tcgctcgtaa
     7321 cccagcaccc gggacaggaa tttctcccgc tcaatgggct tcatggagcc catgatcgcg
     7381 agctccttct gaccggtgaa ataggtattg aagaactcgt cgtgcgacat gcccaggatc
     7441 cgacccagcc gttcggtcac ggcgctggcg ctgttggcga tgggttgggc atccccatcc
     7501 tggtacaatt ccgcgccatg cagcgtgcgg accacccggt aatgatgggc tccgagagtg
     7561 aactcgaccg aggcttcgac ccgggctcgg gggggtgcgt tgcgacgccg gatgccgtcg
     7621 accgcgcccc gcgcggcctt ggttccgtag atggcccacg ccaatccctc gagcagcgtc
     7681 gtcttgcccg aaccgttagg gcccaccaca ccggtcaggc cgacatcgaa ccggaggtcg
     7741 gtgtcctcgt gctgccggaa attcaccagg cgcaaccggt gcacctgcat cagctgtcct
     7801 cttcccgcac gaccgcttcc agcagctcca cccctccgcg cacgaaggcc gcgcgatcca
     7861 gctccgccgg cagcggccgc ccgctgagat agtcccgcaa cagctccgcc aggggcttgc
     7921 gtcggccgcc tggatcgagc cccagtccgc cgctcgagtc ggggcgacga agatcgagct
     7981 ggaagtgcag tgcctcggcc ttcacgctcc gaaccgcggc gtgatcgatc gagcgcgcga
     8041 tctcccgggg aacattgaag acgagctggc gcacgatctg atccgccggg ccgccctcga
     8101 tcgtcgccag ccgctcccga atcaggcgat cgaggtcctc ggccgtctgt ccatcaccgt
     8161 agagcggcgg gagatcgatg acccgccgag caccccggac cggcatccgg gtggcggtgc
     8221 cggccgcgag gtccaacagc agccagccct ttccggtgtg gccatggcgc cgctcgtcgc
     8281 gcagctcgcc ccagggattg gaggtgacgt actcgagcga gcccgagtac cacactcgcg
     8341 gctccacttc atgctgcacg tggtaatgac ccagacccac ccagctccac tcgccggggt
     8401 ggagcgaagc gagcggcagc accagcccgc cccaggcggc gccggagatt tccggcgggt
     8461 acacgccctc gatttcccca tgcaggagca gcagctggtg tcgctcggcg ccttccggat
     8521 gcagcgcggg ccgctcggcc ccacgcaggg cgtggtgtgg cactgcgagc acgctgagtc
     8581 ccagatcggg ccaggccatc cgccgaggct gatccagggc gacgtccacc cccacctctt
     8641 catagagctt aaggatcgat ccggtttcgc tggagcgggg cgtatcatga ttgcccgcga
     8701 tgaccacgat gggggcttcg ggcaatgcct cccgcaaccg ctgaaactgg cgaaaggcga
     8761 aaatgatcgc cgcgttggtc ggacggaccg cgtggaacag atcacccgcc agcaggaccg
     8821 catcgggccg agccgtgatg atcccgtcga ccgccaggcg gaacgcattg gcgacatccg
     8881 cctcccgctg gttgatgccg agcggggtca gccgatggaa ctggcggaaa ccaaggtgga
     8941 cgtcggcgag gtgggcgatc ttcacgcttc taaattagcc cctcaccggg gcggacaccc
     9001 tatggcgcgt acggatcgtc gctcgttttc acccccaaca ccggccgcat ctggcgggtc
     9061 tcggtcgcca ccgccttccc cagacaggag cggaagtaac tcaggggctc gcccggacgg
     9121 gcccgctcgg tggcgtggag cgcccggcgg acatcctctt cctgccgacc gtccaccagc
     9181 gccagtactt tggcggtcga caacgacggg tcgaggctcc gcagccggcg cgccaccgcc
     9241 tggatgaacg ggacctccgc ggcgggcgga aaccgtacca caccgtcgcg gccccccagc
     9301 gacgcgggcc gcggaaaccg cacgaagatc gggtgagtga agtggggatg gcgaaccatc
     9361 agctcaccct tgggcatccc cgccagcttg gccttggtgg ccggtgacag ggtggcgtag
     9421 accggcatgg cgagctcgtc gctgtccatt cggccgtaga ccgcggtccc ggcgttgccg
     9481 accacccgcc ggtgcacctg ggagcggaac tgctgggccg agaacagcac caggcccagg
     9541 tagcgtcccc gctccgacag atcgagcagc atccgccgca cataggtatc ctggccgtcg
     9601 gccggggcgt atttgttgag ctcgtcgacc accacgatca cgtgatccac ccccaggtcc
     9661 cggcgctcca agtgctcccg gagcttggac accacccggg cgaagaccaa atcctgggcc
     9721 agcggatcga ccccagccag atcgagcacc gacacgctgc ggtcggtgaa gccgccccag
     9781 ggcaggtcgt tgatctcgcc gtcatcggtc accagtccct tggatcgggt gctgatgttg
     9841 ctgagccggt tccgcacttt ccggatggtg gcgatgtggt gggtgcgcca gacttccccg
     9901 cccttcccca gcgcctccat gaaatcgaag atggcgcgga agaactggtc caggtcggca
     9961 aagctccgga ccagaaacgg cgactcgcgc aggctccggt cgacgaactc acggcctacc
    10021 acacgctccg ccaggaaatc gatgaacgcg tcggccttgg cgtcgatgtc gtcccggttg
    10081 agcaggacct cggcgtagtc gaggacctcg cgcaagcccc acaccagcgg ctcggtgttg
    10141 ccggagagcg cctcgttggt ccgcaaggtg ttgaggttca cgccgtcggg cttgtacggc
    10201 gcataacacc ggaggttgcc gaatggctga ggcacgagcc ccaggcgctg gtagagccgc
    10261 cggtcttcct ggtccagatc acagggctgg tccaggaaca tcagatcggg gcctttcacg
    10321 ttgaagcaga ccgccgccac gctgcccttg tgggccggcc aggtctggaa gatgctcgag
    10381 aggaggaacg tgatggcgct ggtcttggtg gcgagtccgg aaacgccggt gatgttgaga
    10441 tgggccgcct cgggaccgag caggaattcg gcgtcgagat agaccggcgc ctcgagccct
    10501 ccggcccggt agagtcccac cggaataccg gtgggatcgt cgccggtgag gaacccgtcc
    10561 atccgcaggg cggcggccac gtcggcatcc tcggcggcga agacgacccc cagcgggacc
    10621 ggctgcaacg gttcttcggg ggtctgccgc agcaccgagg cggcatagag ccggatctcg
    10681 gtccggtcgg tcggctcggg agcggcggag ggattgccgt ccgcgcccag aacggcatga
    10741 aggggggacg ccaggtcgga ataggcgaag ccgtcggtca ccacgccgta gatgacccgg
    10801 ccctcgccct cgaccctgac gatggcgccg atgccgatcg gggtctcccg cccggtccag
    10861 aagaagaact gatggggagt cgacggcttc tgctcggtgg cgacgacgcg gccgatgggt
    10921 tcgtgcgcca tgatcatcgg gccgggagtc gggaacgcag gtagtcctcg acgttgtgga
    10981 tcccgtacag caggcgatcc caacggccat ccggggcgct caccggagcc cgctccgcca
    11041 gcacccagcg ggaccaccga tcggcctgct ccagcgtctc gggtcggcgg gctgcttcca
    11101 cccgcaccag gccgaacagc agatcccgtc cctgccaggg ccacagcctg aggccccagg
    11161 cgtagaccgg cgtgaaccgg agggaagccg gctcgaacac cgaggagcga tgcccttcgg
    11221 gcagggcaag gtaggtcccg aggtcatcac cccgaaatgg gagagtggcg tgactccggg
    11281 agactcccag catccgccgg tcctcggcga agtcggtgct cgcggccagc gagccatcca
    11341 cgatgatcca gccatcggat cgctgccggt aggcccgccc gacctgcaat ttcagcgcgc
    11401 tgcgggcgtc gtcgatcttc gcgaccgcgc gatcaatctc gcggaccgga tgctgttcgt
    11461 cgtcctcgtc gaggacgacc gactggtagg gagcgagcca gtcgggcact cgttccagtg
    11521 cgctccggcg gccgatgacg aggcgacggc tggcctcgac caccgtcgtc agtcggcggt
    11581 cctgacgctc ccgcaccgcg gccgacgcga tgcccgccac cagcgggaag gtcccgtggt
    11641 agcccacgac ctggtggtgc tggatgccat ccagaaaggc gatcggctcc gggcagggtt
    11701 gcgggggtcc gacatccagc gcccgcaccg tcggatgttc gatgaggctg gcggggcgga
    11761 tggtggcttc ttcggtgcgg ccccggcttc ccggtggacg ggccgtggcg gtggagaacc
    11821 cggcccgggt cagggtccgg cggagatcgt cgaatggcac cgcggctccg gctactcctc
    11881 gctggggaac gggggcacgc ccgtcaacca gaacccggcg agctggtcgg aggcatcgac
    11941 ctcgatcagg agatgatcgg ccacctggac caccgtcacc ggccgttcgg gaccgatccg
    12001 cagatgaaag gtctgctcca acccgtcgac cgtcaccgcc agcggctctt cgatctggcg
    12061 aggaccggag ggcggcggca gtcccacctt gccggccatc tggggcgcag gaggcctgag
    12121 cccgctcacc gtctccacat ccggccaaat gacgatatcc agcccgcaga tttcgttctc
    12181 caccacatca agcaccgcca ccgccccgtc cggcgacgac agctccacgg tctccgcggt
    12241 ttcgcctcgt cggggagtgc ggtaactgcc ggacaggatg tcggtttcgg attcccatcg
    12301 ccaggctagc tggggaaaca cggtcaggcc cggcatgatc gcggtcgcaa gcatgggtga
    12361 catccgtcag gccgcctggg aggcgccgag ccgcatgatg aagggcaaca gccgttccag
    12421 cgccgcttcc aggtcggcct cggacaccgc gtagctcagg cgagcccagc gatcgtcacc
    12481 gaacgcgcca ccgggcacga gcgcgacgcc ttcctcctgc atcagccggg tgcagaaggc
    12541 ctgcccgcct aatccaggag cgatgccatc gactcggaaa aagaagtaga acgcgccgtg
    12601 cggttccacg aactcgatac cgggggcttc ggagcggaaa cgggacacga tccgatcgcg
    12661 tcgacgacga aacgccgcca ccatccgcac cacgtcctgc tctacccggg gatcgctgta
    12721 ggccgtcacg gccgcccact gcgccgggtg attggcgccg gtggtggtgt gggattgcag
    12781 ggcggccatg gcctgaacca gatgaggcgg agccagagcg gccccgatcc gccaaccggt
    12841 catcgcgtag gccttgctgg cccccgtgat caccaccagc cgttccagca actcatcggg
    12901 aagatcgagg aacgacgggg cgtgggctcc accatagttg atccggcgat agatctcgtc
    12961 cgccaggatc cagacctggt tggcccgggc ccaggtcgca atggcttcga tctcggtacg
    13021 ggtgtacacc gccccggtgg ggttgcaggg cgagcagaga atcaggccgc gcaccagctt
    13081 gtcggtgcgc cgctccaggt cgcgaacgct gaccttgagg ccccactcca catcccccgg
    13141 caccatcacc ggctcggccc gcgccaggtg gacgatctgg ggataggaaa cccacgccgg
    13201 agacggaacc agaaccttgt ccttgggtcc aaagagcgcg aagcacgcat tgaacagcga
    13261 ctgcttggac ccggtgctga tgatgatccg atccggatcg accggccgcc cggaggacag
    13321 ggccgagaga ttctgggcaa ccgcccgacg cagctcagga atgcccgagt tgggagggta
    13381 gtgggttttc ccttgctgga tggcggcaat cccggcctgc gcggccgcgg agggagtgtc
    13441 aaagtcgggc tcgccaacac ctagatcgag cacatcttcg cccgcggctt tgcgacgccg
    13501 ggcttcagcc gagacggcta ccgtctcgga tgccttgagc tgggcgagat tggaggaaag
    13561 ccggtctggc atggtgatgg ctaaaaccta atgccgtgcc tctatctttg aggtgggtct
    13621 ctttgaaatc ccgaacctgg acgtatcagt gtctctcctc agttcgcttg ggtgggaagc
    13681 cgcgagcccg gcggtcaggg atgtggttcc ctcgatcacg cgggggaaca acctggtggt
    13741 cgtggtgccg cccgcaccgg tttatgtcac ccccacgctc gccggcctga tcgagcggcg
    13801 cgctgagtcc ggtcacggga tcctggtgat cgccccggcc cccgggttgg gagaatgggg
    13861 cgcgctgctt gcctccctca ccgccgggct gacccctcct cccctgctgg cgctggggcc
    13921 acgccaggcg gaacgattcc ttcgccccgg taccggcgcc agcgtgttgg ttgcatcgcc
    13981 cgccacggcc gtgaccctgc gccaacggtc gttgattcag accgagcgaa tcggttcggt
    14041 cctgattgcc tggcccgagc tctgggatga tgccgacgcg ctcactctgg tgctccagga
    14101 tctgccccac gaggtccagc gggtgatcgt caccgccgat ctcggggcgg tagccccgct
    14161 ggtggagcgc cacgcctggc gcgccatgac cgtcggcatg gcttcaccac tcccggagcc
    14221 ggccgggccg gtcatggttg tggaagtccc ctgggggagc cgcgccgacg cacttccggc
    14281 cctggccgaa cgtctgaacg tcgattcgct ggcggtatgg accgcggaca gcagccggca
    14341 cgaggagctc cgccgcgtgc tggcggggat cgggtcatcc atctccctgc aggtcgggaa
    14401 gcccgctcca gccgcccaga tcattgcatt cgacccccca acgcccgatc ggctcgtcga
    14461 actgctgcaa gccggtggcg tgacactgtt ggcgcctccg gggaccgagc gctggatcgc
    14521 gcgcatcgcg gcgccgcgcc agtccctggt actatccggc gcgctggacg cctccaacgt
    14581 cgagctggcc cggcgccggg cgctgatcga gcgggcggtg cgggacgagt cgctggacga
    14641 ggggtttctc gcgttggcac cagtgttcga tcagcaggac ccggcgtcgg tggcggctgc
    14701 gctgtatcag atgtggactc gactgcctcg tccggctctg gcgaagcagc tcgaagccag
    14761 tactgccgcc gcaccccggt cgcggatctg ggtcggcgcc gggaagcgcg atgaagtggg
    14821 ggtgggcgac ctggtggggc tgctcatcaa cgagcttcgg atggagcgct cggcgatcgg
    14881 caagatcgag ctgcgcgaca cattcgccct ggtggaggta ccggctccgg aagcggaccg
    14941 gatcgtccag gccctctcgg gccggaccct caggaaacgg cgtctggtgg cgcgggtcga
    15001 ccgaaaaccc taggcagtcg gtcggtgggt cagttggacc gtcggtcaag gggcaatgga
    15061 gcgaccgact gtccgactga ccaactgacc gactgagacc tcatttcttg ccgcgattga
    15121 cgacgtcctt caggcccttg ccggcccgga agaccggagc agtcgaggcc ttgatcttga
    15181 tggcggcgcc ggtctgcgga ttgcggccgg cccgcgcgcc acgcttgcgg gtcacgaagt
    15241 tgccgaaccc ggtcacctgc accctaccgc ctttcttgag ctcaccggcg atgatcccgt
    15301 cggcggcaaa gaacaggtcg acgatctcgc cagcctgcgc cttcgaggtg tccagtttct
    15361 tcgcgacgac ttctacgagg tcctgtttgt tcatgagaac tccttgcggc ttgcgaccgt
    15421 tggtgggtac atgcggggtg cgaccagcat cacgcgggat agcagcaata tcggaacgtc
    15481 ggccgggaat ccgcaagatc actgagtttc ctcgcgcttg ctcccgaccc tccatgacag
    15541 tatgctggtt cccgatcggt acggcccacc tcgatcgacg cgagcagtcc tgatgatcca
    15601 cggaccccga accgggtcaa tcgaagtcat tgccggcgtg atgttcagcg gcaaaagcga
    15661 agaactgctc cgccgagtcc gccgggccca gatcgcgcgc cgtcgggtgc aggttttcaa
    15721 gtcgcacctc gacgagcgat acgccgggct caaactcgtg tcgagtcacg acggacggtc
    15781 gctggaagcg gtcgcggtgg gaaccgcggc cgaactcagc cggctgatcc gccccgagac
    15841 cgagatcgtg gccatcgacg aagcccagtt cctggacgat gccgtggtcg acgtgtcgac
    15901 ttcgctggcc aaccgcggag tgcgggtgat cgtggccggg accgataccg atttccgggg
    15961 agaaccgttc ggtgccatgg cgcaactgat ggcggtggcg gagacggtgg acaagctccg
    16021 ggcaatctgc atggtctgcg gcgacctggc ctgccggaac cagcgcctga tcgatggccg
    16081 gcccgcgccc tatgactccc ccatcatcct ggtgggcggc agcgacgcgt acgaagcccg
    16141 ctgtcgccac tgtcaccggg tgccgcaccg ggatgaggac cagaccgctc tcctctaagc
    16201 gctggtcact ctcgtgaccg gtcgcgagta accggcggcg catgctgtcc gtcgccctca
    16261 ccggcaacat cgcctccggc aagaccacgg tcctgaacct cttccaatcc tggggcgcct
    16321 tcaccaccga cgccgacgcc atggtgcggg aactgcagcg gcccggcacc cccgtattcg
    16381 atgcgattgt ccgccggttc ggtccgcccg tggtggcctc ggacgggtcg ctcgaccggg
    16441 gggctttgcg gcgcatcgtg ctcgaggatc ccgcggctcg agccgatctc gaggcgctgg
    16501 tccatcccgc cgtccacgag cggcgggccc aggccctggc ccaggcccgg gccagcggtg
    16561 tgccggtctc cgtccatgac attccccttc tgttcgaggc ggccgacccg tcggagttcg
    16621 accggatcgt cctggtcgaa gcctcgccgg cccggcggcg ggaatggctc atccagcggc
    16681 ggggtctcag cccggccgag gccgaccgca tgataggggc ccagctgccc agcccggtca
    16741 agcgagcccg cagccattac gtcatcgaaa acgatgccga cctcgctacc ttggggcagc
    16801 gggcgagagt ggtctgggat cagctgatca gcgaggccac ccgttccgct tgacccgcgc
    16861 acagcccgcg tctatcctca tccgcgccca aggcggaagg tgttccggtg gcccaagtcc
    16921 ctgacgatct gcgctatacc tccgatcacg aatacgctcg cgcggccgcg gaagccggcg
    16981 tctacgtcat cgggatcacc gactacgccc agggtgaact gggcgatgtg gtgttcgtga
    17041 acctccccaa ggtgggtgag aagctggggg cgcatcaggt gttcgggacc atcgaggcgg
    17101 tcaaggcggt cgccgatctg tacgctccgg tcgccggcac ggtggttgaa atcaacccgg
    17161 gactcgatag cgaccccgcg gtcgtcaacc gggatcccta cggcgacggc tggatgatca
    17221 agcttcgcgc cgacaaccgg gccgacgtcg atgggctgct ctcacccgac gcctaccagg
    17281 cgcacatagg cgcgtgatgg gggctacggt cgaagacggt cgaagacggt cgaagctggt
    17341 cgaagctggt tgcattcgat gatgccgctc gccggcccac ccaccttcga ctgtcttcga
    17401 ccgccttcga ccgccttcga ccatc
//
LOCUS       DASWKS010000553         6590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_296241, whole genome shotgun sequence.
ACCESSION   DASWKS010000553 DASWKS010000000
VERSION     DASWKS010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6590
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296241"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VGA78_15815"
     CDS             <1..466
                     /locus_tag="VGA78_15815"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX9895396.1"
                     /translation="SFPDLEGTLVTNEDPRFRGKVVLVDVFGSWCPTCHDAAPVLAEL
                     YREYRDRGFEIVGLGYEVTGDSATDNRQIRRFRDKFGITWTLLRAGLNVTEATAATLP
                     QLQGFTAYPTMLFLGRDGRIRWIHAGFIGPSVPDQHRATVAEFRRTIESLLK"
     gene            1072..1488
                     /locus_tag="VGA78_15820"
     CDS             1072..1488
                     /locus_tag="VGA78_15820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895397.1"
                     /translation="MKVLIAALADHANIAHPGDKLNLMGVFDVIGAPQFPVVHPGAVL
                     AIRLELEYEDGERKHTLAVVIVNQDGKEFAKIETQMEVAKVKPGQRLTANHLLFFRHL
                     AFRAPESFSVLIRWDGELKQTLPLDVVAVPPPTATT"
     gene            2213..3082
                     /locus_tag="VGA78_15825"
     CDS             2213..3082
                     /locus_tag="VGA78_15825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_040609789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HEX9895398.1"
                     /translation="MNVLDRPTRAAVVRSLCEGNSIRATARMTGTAKATVLKLLMELG
                     EFCSIYQDHILRNLPCVRVEADEIWAFVGAKQKKARQEGHGDIWTYTALDSDSKLIIS
                     WLVGARNTENAIEFMQDVAARLTNRVQLTTDGHGMYLTAVREAFGFGRVDYAQLVKHY
                     GQLEQGVEASRRYSPPVCTGAEKVRCIGRPNMDLVSTSYVERANLSLRMQQRRFTRLT
                     NAFSKKAGNHAHAVSLYFFYYNFCRPHQTLTKDHPHHYPTTPAMAAGVTDHVWKVEEI
                     LSLMDPATPLQSK"
     gene            3228..4148
                     /gene="lipA"
                     /locus_tag="VGA78_15830"
     CDS             3228..4148
                     /gene="lipA"
                     /locus_tag="VGA78_15830"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX9895399.1"
                     /translation="MVIPLARKPAWLKVKAPGGENYIRIKRLMRGLGLHTVCEEARCP
                     NIGECWEHKAATFMILGDVCTRNCAYCAVAHGTPQPFDPVEPFRLAEAVAEMGLKHVV
                     ITSVDRDDLENGGAEAFAGCIREIRKRLPETSVEVLIPDFKGSERALGIVMEARPDIL
                     NHNLETAERLYPMARPGGRYQRALQLLANARRMGGPGALTKSGIILGMGEEWDEILVA
                     MRDLRRSDVNLLTLGQYLRPSNSHLPVVRYYAPEEFSELAEAGMRMGFAHVQASPLTR
                     SSYHAWDQARAAVAGGERGETPRTWTAGGA"
     gene            4148..5161
                     /gene="pdhA"
                     /locus_tag="VGA78_15835"
     CDS             4148..5161
                     /gene="pdhA"
                     /locus_tag="VGA78_15835"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX9895400.1"
                     /translation="MATSAATRPRAGGGQRAEELTRYLRQMLLIRRFEEKAGESYSLG
                     KIGGFCHLYIGQEAVAVGSIAALRADDYLISAYREHGQALARGISARSVMAELYGKVT
                     GCSRGKGGSMHLFDAKLGFMGGHGIVGGQIPLACGVAFAFKYRGTDQVIACYFGEAAV
                     NIGAFHEALNMASLWKLPVVFIIENNGYGMGTSLARASSILDLSHRAYSYEMANEVVD
                     GQDVLTVKAAMETAVARARTEKKPTLLEIRTYRYVGHSMSDAAHGTYRSKEEVEEFRK
                     RDPIVVLRDQMMADGLIDQAGFEQLDREAVAEVDDAITFADSSPDPDPSELWTDVYAP
                     RAG"
     gene            5161..6144
                     /locus_tag="VGA78_15840"
     CDS             5161..6144
                     /locus_tag="VGA78_15840"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX9895401.1"
                     /translation="MAVITYREALNQALREEMRRDPDVFLMGEEVAEYDGAYKVSRGL
                     LKEFGPLRVVDTPIAELSFAGVGVGAAMVGLRPVIEFMTWNFALLAIDQVINSAAKLR
                     YMSGGQIGCPLVFRGPGGAALQLGSQHSQAFESFYAHVPGLKVVTPATPADAKGLLKS
                     AIRDDDPVIVMEGEMLYNMKGDVPEQEEFLVPLGRAEVKRPGSDVTLICHSKTVAVAL
                     KAAEQLAAEDLQAEVVDLRTVRPLDTETVLKSVVKTNRAVVLEEGWPFAGVGAQVVDL
                     IQREAFDQLDAPVLRVTGADVPMPYNKQLEKAAKVDVTKAVAAARRVLYLE"
     gene            6148..>6590
                     /locus_tag="VGA78_15845"
     CDS             6148..>6590
                     /locus_tag="VGA78_15845"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX9895402.1"
                     /translation="MATKVLMEALSPTMEEGRLVEWKKNEGDQVASGDVLAEVETDKA
                     VMELVARSGGTLLKQAAASGATVPVGSVIGWIGEPGETIGDGAASAAPSPGADRRTAG
                     QAASEGKAEPPSVPPAPAPTPPAGPPPRSPVRPPEGRVKASPLAR"
BASE COUNT         1225 a         2059 c         2137 g         1169 t
ORIGIN      
        1 ctcgtttccc gatctcgagg gaaccctcgt gaccaacgag gatccgcgat tccggggcaa
       61 ggtggtgctg gtcgatgtct tcgggtcgtg gtgtccgacg tgtcacgatg cggctccggt
      121 gctggccgag ctctatcgtg agtatcgcga ccgcggattc gagatcgtgg ggctggggta
      181 cgaggtgacc ggcgacagcg ccaccgataa ccgccagatc cgccggttcc gcgacaagtt
      241 cggcatcacc tggaccttgc ttcgagcagg gctcaacgtc accgaggcga cagccgccac
      301 tctgcctcag ctgcagggct ttaccgccta tcccaccatg ctgttcctcg gccgcgatgg
      361 ccggatccga tggattcacg ccgggttcat cggcccttcg gtacccgacc agcaccgggc
      421 caccgtcgcc gaattccgca gaaccatcga gtcgttgctc aaataatccg gagagggaga
      481 cgggagaggg gagacgggag agaggcgcga ccgtcatcgg cattcgctgt ccccctcccg
      541 acttccgtct ccccctgccg ggtagtgggt cagactgaat tgtgacaatt ggccagtgta
      601 acggcctacc ccctatcttc agggcatcat cccgggggcg ctgaggatgc cacgttacac
      661 cttcgatccg accaaggttc gactcattcc cgagtatccg gctgatgaga tgcgggcaat
      721 ctggggtcag gtccagatag aacttctaac cgagtttccg gaccttcccg ccaagtaccg
      781 ccggaccgtt gcacttcggc ggtaccagga acgactgacg cggcccgacc cacgataacg
      841 ggccgcccat gccacgcaag aagaagcccc ccaaagagtc gccccacaag ctccgccccg
      901 atgtggcgga aaccgcgttc cgggtcatgc aggaagcgat tggggaggcc cccaaaacaa
      961 agcccccgag tgagcggtcg gagtcggaga ggaatcctga agctattaag cggggtcgag
     1021 taggtggtaa ggactcagat gcccattaca agaaatgacc tacgttaacg gatgaaggtc
     1081 ctaatcgcgg cccttgccga ccacgcaaat atcgcccatc caggtgacaa gctaaacctg
     1141 atgggcgtat ttgatgttat cggcgctcct cagttcccgg ttgtgcatcc cggtgcggtc
     1201 ctagccatcc ggctagagtt ggaatacgaa gatggtgagc gcaagcacac tctcgcggtc
     1261 gtcatcgtaa accaagatgg caaagagttc gcgaagattg agacgcagat ggaggtagcc
     1321 aaggtcaagc ccggacaaag actcaccgcc aaccatctcc tgttcttccg ccatctcgcc
     1381 tttagggctc ctgagtcgtt ctcagtactt atccgctggg acggcgaact caaacagaca
     1441 ctcccgctcg atgtggtcgc cgttccgccg ccgaccgcga ccacctgatc ctcgggtcga
     1501 ggcgtttcgt cggtttttgg ctattgccga gccgatgacc ggggacgccg aagagctgct
     1561 gagggcctgg caatttgtac ccggcgagga aattgcagta ttcttggtac ggacagcccg
     1621 catctggcga caccagttgc tacccgaacc ggactgggta gtctcgctag aaagcggtgt
     1681 cgttctgcac gattggaccg tcaaacagac aatccgggcc gtgcagaagt tggcagaacg
     1741 gcttggaata cccctttgag gggaatgaag aatggaacga atgttggttg agagttatcc
     1801 tgtcggttgg gctgtcgatt ccaggaaagc cgagcctgta gcggcatttc tgattgacat
     1861 tccgggtatt gccatgcagg gacgtaattt ggacgaggct atcacgaagc ttcgcgccct
     1921 ggctcccgtg gcgttggccg ccctgaggcg ggacaatgtc gtacttccga ctccgtctcg
     1981 ggagccaact ctgacgatcg gtgaactggc tgaactgcgc gtgcgaggcc cgattggggc
     2041 ttctaaacaa gtcccagaag ctgaactacg aattgacctg atgcccgcgt aatagtgcac
     2101 tttctgtagt cagcaggtcg gacgccgtct cgcgaatccc ctgaggcggt gtcttttttt
     2161 ggccccgtta cgacttgaca ctgacaagca atcgaccatt ttgattgtta caatgaacgt
     2221 gctcgaccgt cctacccgcg ctgctgtcgt ccggtccctc tgtgagggca attccatacg
     2281 ggctactgcc cgcatgaccg gcacggccaa ggccactgtg ctcaagctgc tgatggaact
     2341 gggcgagttc tgctctatct atcaggacca catcctgcgg aacctgccct gtgtccgggt
     2401 cgaagccgac gagatttggg cattcgtcgg agccaagcag aagaaggcgc ggcaggaggg
     2461 ccacggagac atttggacct acacggcgct ggattccgac tctaagctca tcatctcatg
     2521 gctggtcggg gccaggaata cggagaatgc cattgagttc atgcaggacg ttgcggctcg
     2581 gcttacgaac cgagtgcaac tgacgactga cggccatggc atgtacctga ccgccgtccg
     2641 ggaagccttc ggcttcggtc gggtggacta tgcccaactg gtgaagcact acggccaatt
     2701 ggagcagggc gtagaggcga gtcgccgcta cagccctccg gtctgcactg gcgctgagaa
     2761 ggtccggtgc atcggacggc ccaacatgga cctcgtttcg acttcctacg tcgaacgggc
     2821 caatctgtcg ctccggatgc agcagcggcg gtttacccgg ctcacgaacg ccttcagcaa
     2881 gaaagcgggg aaccacgctc acgcggtcag cctgtatttc ttttactaca acttctgccg
     2941 ccctcaccag accctcacca aggatcaccc ccaccactac ccgactaccc cggcgatggc
     3001 ggcaggcgtg accgatcacg tttggaaggt tgaggagatt ctttctctga tggacccggc
     3061 caccccgtta caatcaaagt gacccactac ccccctgccg cctccgtctc ccgtgtactc
     3121 gttgtcccgg ctatacttac gggttctgag gaggtcgtcc cttggccctg ccgctggtgc
     3181 aaatctcccg ctcatccacc cggcccgaat ccaaccggcc gacaccggtg gtcattccct
     3241 tggctcggaa acctgcctgg ctcaaggtga aggcccccgg cggggagaac tacatccgga
     3301 tcaagcgcct gatgcggggg ctcgggctgc acacggtgtg cgaggaagcc cgctgcccca
     3361 acatcggcga atgctgggag cacaaggcgg ccaccttcat gatcctgggt gacgtgtgca
     3421 cccggaactg cgcctactgc gcggtggccc atggaacccc ccagccgttc gacccggtgg
     3481 agccgtttcg tctggccgag gcggtggctg aaatgggcct caagcacgtc gtcatcacgt
     3541 cggtcgatcg cgacgacctg gaaaacggtg gggcggaagc gttcgcgggc tgcattcgcg
     3601 agatccggaa gcggcttccc gagacctcgg tcgaggtgct gatccccgac ttcaaaggct
     3661 cggagcgggc actagggatc gtcatggagg cccggcccga catcctgaat cacaatctcg
     3721 agaccgccga gcggttgtat cccatggccc gaccgggcgg ccgttaccag cgcgcgctcc
     3781 agctgctggc taatgcccgc cggatgggtg gccccggcgc gctcaccaag tccggcatca
     3841 tcctcggcat gggcgaagag tgggatgaga tcctggtcgc gatgcgcgac ctgcgccgga
     3901 gcgacgtcaa cctcctgacc ctgggccagt acctccgtcc ttcgaacagc catctccccg
     3961 tggtgcgcta ctatgccccc gaggaattca gcgagctggc cgaggcggga atgaggatgg
     4021 gcttcgccca tgtgcaggcg agcccgctca cccggtcgag ctatcacgcc tgggaccagg
     4081 cccgggccgc ggtcgcgggt ggcgagcggg gcgagacacc tcgcacgtgg accgcggggg
     4141 gggcctgatg gccacctccg ctgcgacccg cccccgagcc ggcggcggcc agcgggccga
     4201 ggagctgacc cgttacctgc gccagatgct gctgatccgc cgcttcgagg aaaaagccgg
     4261 cgaatcgtac agcctgggca agatcggcgg cttctgtcat ctctacatcg gccaggaagc
     4321 ggtggcggtg ggctccatcg cggccctgcg ggccgacgac tatttgatca gcgcctaccg
     4381 tgagcatggt caggccctgg cgcgcgggat atcggctcgg agcgtgatgg ccgagctgta
     4441 cggcaaggtg acgggctgct cccgcggcaa gggcggctcg atgcacctct tcgacgccaa
     4501 gctcggcttc atgggcgggc acgggatcgt gggtgggcag attccgctgg cctgcggcgt
     4561 tgccttcgcg ttcaagtacc gcggcaccga tcaggtcatc gcctgctatt tcggagaagc
     4621 ggcggtcaac atcggggcct tccacgaagc gctcaacatg gcctcactgt ggaaactgcc
     4681 ggtggtcttc atcatcgaga acaacggcta tggcatgggg acgtcgctgg cccgggccag
     4741 ctcgatcctc gacctgtcgc accgggccta ttcctacgaa atggctaatg aggtggtcga
     4801 cggccaggac gtgctgacgg tgaaagccgc gatggaaacg gccgtggccc gggctcgcac
     4861 cgagaagaaa ccgactctgc tcgagatccg gacctatcgc tacgtcgggc actcgatgtc
     4921 cgacgccgcc cacggcacct atcgctccaa ggaggaagtg gaggagttcc gcaagcgcga
     4981 ccccatcgtg gtgctgcggg accagatgat ggccgacggc ttgatcgacc aggccggatt
     5041 cgagcagctc gaccgcgagg cggtggccga ggtggatgac gcgatcacgt tcgccgactc
     5101 gtcgcccgat cccgatccgt ccgagctctg gaccgatgtc tacgctccgc gagccggttg
     5161 atggcggtca tcacctatcg agaagcgctg aaccaggcgc tgcgggagga gatgcggcgc
     5221 gatccggacg tgttcctcat gggcgaggag gtggcggaat acgacggggc ctacaaggtg
     5281 agccgcggcc tgctcaagga gttcgggccc ctgcgggtgg tcgatacccc gatcgcggaa
     5341 ctgagcttcg ccggagtggg cgtgggggcg gccatggtgg gcttgcggcc ggtcatcgaa
     5401 ttcatgacct ggaacttcgc gctgctcgcc atcgaccagg tcatcaactc ggccgccaag
     5461 ctgcgctaca tgtcgggcgg acagatcggc tgtcccttgg tattccgcgg gcccggcggc
     5521 gccgctttac aactgggctc gcagcattcg caggcgttcg agtcgttcta cgcccacgtc
     5581 cccgggctga aggtggtgac gccggccact cccgccgatg caaagggact gctcaagagc
     5641 gccatccggg acgatgaccc ggtgatcgtg atggaaggcg agatgctgta caacatgaag
     5701 ggggacgtgc cggagcagga ggagttcctg gttccgctgg gccgggcgga ggtgaagcgc
     5761 ccgggctccg atgtcaccct gatctgccac tcgaagacgg tggcggtggc gctcaaggcg
     5821 gcggaacagc tggcggcgga ggacctgcag gcggaagtgg tcgaccttcg caccgtccgg
     5881 ccgctcgaca cggagacggt gctcaagtcg gtggtgaaga ccaatcgcgc tgtggtcctg
     5941 gaggaaggct ggcccttcgc cggcgttggc gcccaggtcg tagacctgat ccagcgggag
     6001 gcgttcgacc agctcgacgc gccggtgctc cgggtgaccg gggccgacgt gccgatgccc
     6061 tacaacaagc agctcgagaa ggccgccaaa gtggacgtca ccaaggccgt ggccgccgcc
     6121 cggcgggttc tctacctcga gtaattcatg gcaaccaagg tgttgatgga ggccctctcg
     6181 cctaccatgg aagagggccg cctggtggaa tggaagaaga atgagggcga ccaggtcgcc
     6241 tcgggcgacg tcctggccga ggtggagacc gacaaggcgg tgatggagct ggtggcccgg
     6301 agcggaggca cgctgctcaa gcaggccgcg gcgtcgggcg cgacggtgcc ggtcgggtcg
     6361 gtgatcggct ggatcgggga acccggtgaa accatcgggg atggagccgc ttccgcggct
     6421 ccatccccgg gggcggaccg acggactgcc ggacaggcgg ccagtgaggg aaaagcggag
     6481 cccccgtccg ttccaccggc accggccccc acacctccag ccggcccgcc ccctcgctcg
     6541 cctgtccgcc cgcccgaagg gagagtgaag gcgtccccac tggcccgtaa
//
LOCUS       DASWKS010000554        11063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1406730, whole genome shotgun sequence.
ACCESSION   DASWKS010000554 DASWKS010000000
VERSION     DASWKS010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406730"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1781)
                     /locus_tag="VGA78_15850"
     CDS             complement(<1..1781)
                     /locus_tag="VGA78_15850"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9895403.1"
                     /translation="MPTLLDALVETPPRVEPEPGRSPRTIGTAHQPVRVIAFSSGGFD
                     AAMQLGVTHALLTINGKAPDAAVGVSAGAVNAAALAEVFQAAPDPADWPDLDPAARDQ
                     MLHDRQRARVARFRKMLEACLSAPGELARAMLPDTLQVEAQQPLRPLELPIHERKERD
                     GRQKELHARQGFINLFNDLLGLKVSFGTLTRLFRRMLGWQAAAEIRSTAGRLAARSFE
                     LARVWALIAVNFPRAAWVIQRLVAPLFTDRAKPRGEAATAAAIIFRPRWLRALRRVLV
                     RAVMTLLLFLLWITISLCVIGVPFLALRLLSGALWVLGGSLDLTGPARVAAWLDQNLP
                     VLLAILYAVLGGALAIGLWMTGAWGHIANFNRTRPRAVLGEAGLEAVGFGLLLAGSLV
                     PPFALFGLVGWMEGQRTLGGMLERGLVIGEHVFWWLLLVLAGGFAYAWSRNAKDSYLQ
                     RLLARYDIADGLLSTHPLRQFFIPLFDPEYYGERQMDDVVDRALRDNYDPSVTGPRPP
                     KVIASYERQSPPITVGLMVANVKTGNLEIVPDCTKVVDGLIAATSVSPLFPPVPILGK
                     LYLDGANISTEAIPGVITLLRDRVNPAA"
     gene            complement(1786..2046)
                     /locus_tag="VGA78_15855"
     CDS             complement(1786..2046)
                     /locus_tag="VGA78_15855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895404.1"
                     /translation="MSNGFDFSEEAALTNAELAGQLATVTTLSAAEIERLLPTKADKK
                     ALAELIDIVNDAASQNDKVAKLRGRFGDLGGVVLKLLKTVVG"
     gene            complement(2083..2868)
                     /locus_tag="VGA78_15860"
     CDS             complement(2083..2868)
                     /locus_tag="VGA78_15860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895405.1"
                     /translation="MQPVPVRLTLLIAVATAGPTGCIRAPQATLTLSEVVGEQISAVR
                     ASHEAFVRLYYARLRQDVDQFLTQVWVPSFLRRAVANQQFRSQLDVAYAVASLDANAI
                     NVSVTGEANLPPAVRAALRQAIDSALQQHRARLGVVMLDFATEVERQITLRRDSLLLP
                     IDEQERFVLAQLADVYADLQRSQSSISAYLGSAVRVQQEQDVILRKLGLLEAQKQALG
                     FAGDASDAAATALTGAAGAESAIAKFLETFKATKDSLAKLKPK"
     gene            3053..3379
                     /locus_tag="VGA78_15865"
     CDS             3053..3379
                     /locus_tag="VGA78_15865"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9895406.1"
                     /translation="MTEPTSLLTRGQFDRIAKALADPRRFALLQAIASDHDYPCSQLC
                     RDFPVTKATISHHLKELVRAGLVQADRQGQFMNYRVRREVLAAYSAELLTRLSPRSLA
                     VETSAE"
     gene            3541..4671
                     /locus_tag="VGA78_15870"
     CDS             3541..4671
                     /locus_tag="VGA78_15870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX9895407.1"
                     /translation="MSRSQKVRSPGGIGAIVLLVTLVGSGGALAAWKGSSLRDSAAAS
                     ANQPEPMEVVTAALASSREYRPTATAIGTVLALQSVTLRNELAGTVRHVALAPGRIVE
                     RGTVLVALDVSVERADLQAQEARLALTETTLNRLQRLLEPQAVSAEEVDRARAERDVA
                     QAEIARIKAIIERKTVRAPFRAQVGLADVHPGQYLTEGTVLTTLQGVADAAHVDFTVA
                     QDVAARLHVGDSVLVAPTNDATPVPARIVAIDSRVDPTTRNAMVRARLNGEVPVASPG
                     ASVRVRVPLGAPTQAVVVPVSALRKGPSGDHVFVITQDDQGKARAHLRPVQAGDVLGD
                     EVMILTGVKAGEQVAASGAFKLREGVLVTLAGEADTLGNGGH"
     gene            4671..7778
                     /locus_tag="VGA78_15875"
     CDS             4671..7778
                     /locus_tag="VGA78_15875"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX9895408.1"
                     /translation="MSDTPRRAITDLFIRHPVIALVVNLVIVLLGWRALSSLPIQQYP
                     QVESSSVVITTVYYGASAETVRGFLTTPIERAVSAMGGVDYIESTSRAGVSTITVRLK
                     LNYNSTAALAEVTARLQQVRSELPPDAEPPVVDIQRTDRPYASFYLSFASPERSVPEL
                     TDWLSRTLQPQFATLEGVQRVSNSEGGRPIAMRVWIDPDRLAAVNLAPGDVYAALQRN
                     NYLAAVGQTKGNLVQVNLLANTDLRTPEEFANLIVADRGGAVVRLRDVAQVELGSEEA
                     QLVAKYNNQEAVYLGVWPLPGANEIAVGDRLLGEIERVRSTLPKDIEMRLVWDGTVFM
                     RDALREISKTLGETMLIVAFVVFLFLGSVRTALVPLVAMPISLIGAGIFMAAFGFSLN
                     LLTILAIVLSVGLVVDDAIVVVENVERHVQEGRSRIDAALLGARELIGPIIAMTITLA
                     AVYTPLAFQGGLTGSLFLEFAITLASAVVLSGIVAVTLSPVMSSRMVHPAGKEGRLTA
                     LVNRGFDRVRQAYGRLLDGAMGMRWAIVTASLLVTVAAWPLYTMSRRELAPVEDQSHI
                     SLFFESAPDATLSATNRASLDVVQAINAFPENRFMWSLTANWGGFGGFVAKDWKERER
                     STEQMYGEVYGAVSQIPGLRVFPRLDPPLPTPGQYDVELVLESDVPPEQMLETVGAVV
                     GAGWQSGKFLYVDTDLKIDLPQATVVIDRDQVADLGLDLATVGRELGTLLGGGYVNRF
                     NWFDRSYKVIPQIGEKDRATVAPLLDLKIKTPSGELVPVSTFTRIETHPAPRTLNRFG
                     QRNAVRVFGGVKPGVTKDEGLQVLEQAATAAAAPGMVMDYAGESRQIRREGSALVVTL
                     GFAVVLIYLVLAAQFQSFRDPLIVLLGSVPLAISGALLFSFLDLTTINIYSQVGLITL
                     VGLIAKNGILIVEFANRLQERGLEKLAALREASLTRLRPVLMTTAATIFGHFPLVLVS
                     GPGSAARNSIGTILVAGMAVGTLFTLFVVPVFYSLIARDHRAVAKETESAGGLQPALE
                     GVGNA"
     gene            7771..9156
                     /locus_tag="VGA78_15880"
     CDS             7771..9156
                     /locus_tag="VGA78_15880"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9895409.1"
                     /translation="MRNVASLFTVALFTGSLSTVNSERVEAQDPGPGPASVTFWGQLG
                     DTTLARLTAEALRANRDVQVAQARVRQARAARMNAALDLAPTVTVAGGFTRQRLSQAQ
                     FGIAVPDRSLWDTEFRAAWEVDVFGRLRKNLRGQDALSESAREDVRDVGRLVTAELAT
                     AYFELRGAQDQLLVAQRNAENQRRTLQLTRNRLDAGRGTAFDTERAQAQLSTTLALVP
                     TFESRIAAARHRIGVLVGRDPKVVGTELAGPCSAEVDESCSVPELPREVVPVEVDSLI
                     RSRPDVRAAERRVAAEAAFVGAAKADYLPRLSVGGTAGFTSTAFDSLGRSGSGRYAVG
                     PVITWPLLNLGRVKAGVDAARGLEAEARARYEQTVLLAREELETARVAYARAQERLTQ
                     LEAAAAASNRAAELARLRFEGGVADFLQVLDAERSLLAAQDQLAQGRTDAVTALVAVY
                     RAVGGGDSGAR"
     gene            9249..9848
                     /locus_tag="VGA78_15885"
     CDS             9249..9848
                     /locus_tag="VGA78_15885"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX9895410.1"
                     /translation="MITRSSLSAALVLSLLAPAVLSAQAASDRPRLVFFANGGGNSPV
                     TDLNEAGTASLKTGWTAGAGVGVQVNPYLAIRGSFNFARSEGEGPAAGLLTGQKLNHY
                     FYGGDVQLRYPTSSGFAPYLLLGAGAVTIDNTDLNTFERFTKFAGKGGLGVEYVLPRS
                     NVGLFVQGTTYVYGYDRGGFDKTQVDLLWTGGLSYRLPL"
     gene            10374..>11063
                     /locus_tag="VGA78_15890"
     CDS             10374..>11063
                     /locus_tag="VGA78_15890"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895411.1"
                     /translation="MLTLQERLTHHLAGRYAFERELGHGGMAVVFLARDLRHDRRVAL
                     KVLRPEISAEIGAERFLREVKMAAGLTHPHVLTVYDSGEVDGLLFYVMPNMEGRSLRE
                     RLERERQLPLEEAIRITREVASALDYAHRQHVVHRDIKPENILFHEGNAMVADFGIGK
                     ALSGEGSITQTGMAIGTPAYMSPEQAGGESAVDGRSDLYSLGCVFYEMLSGEPPFTGP
                     TPQAVIAKRFIS"
BASE COUNT         1765 a         3568 c         3894 g         1836 t
ORIGIN      
        1 gctgcggggt tcacccggtc ccgcagcagg gtgatgaccc cgggaatggc ctcggtgctg
       61 atgttggccc cgtcgaggta cagcttgccg aggatgggca ccggtggaaa caacgggctc
      121 accgacgtgg ccgcgatcag accatcaacc accttggtgc aatccggcac gatctccagg
      181 ttgccggtct tcacgttggc caccatcagc cccacggtga tgggcgggga ttgccgctcg
      241 tagctcgcga tcaccttcgg gggccgcggt cctgtgacgg aaggatcgta gttgtcccgc
      301 agagcgcgat ccaccacgtc gtccatctgg cgctcgccgt agtactccgg atcgaacaac
      361 gggatgaaga actggcgcag cgggtgggtg ctgaggagtc catcggcgat gtcgtagcgg
      421 gccaggagcc gctgcaggta gctgtccttc gcattgcgcg accaggcgta ggcgaagccg
      481 ccggcgagca ccagcaacag ccaccaaaac acgtgttccc cgatcaccag gccacgctcg
      541 agcatgccgc ccaatgtcct ctgcccttcc atccatccca ccagcccaaa gagcgcgaag
      601 ggaggcacca acgagccggc gaggagcagg ccgaacccca cggcttccag gccggcctcg
      661 cccagcaccg cgcgcggcct ggtgcggtta aagttcgcga tgtggcccca ggcgccggtc
      721 atccacagac cgatggcgag ggcgccgcca agtaccgcgt agagaatggc aagcaagact
      781 ggaagattct gatccagcca cgccgcgaca cgggcggggc cagtcagatc gagggatccg
      841 cccagcaccc agagcgctcc gctcaggagt cgcagggcca agaacggcac gccgatgacg
      901 cagaggctga tcgtgatcca gagcaagaac aacagcaggg tcatgacggc ccggaccagc
      961 acccggcgca gcgcccggag ccagcggggc cggaagatga tggccgcggc ggtcgcggcc
     1021 tcgccccggg gcttggcgcg atcggtgaac agcggcgcaa ccaggcgttg aatgacccag
     1081 gcggcgcggg ggaagttgac cgcgatcagg gcccagaccc gcgccagctc gaagctccgt
     1141 gcggcgagcc gcccggccgt ggagcgaatc tcggcggcgg cctgccagcc gagcattctc
     1201 cggaacagtc gggtgagggt cccgaacgac actttgagcc cgagcagatc gttgaagaga
     1261 ttgatgaatc cctggcgggc gtgcagctcc ttctgccggc cgtcacgctc cttccgctcg
     1321 tgaatcggaa gttccagcgg acgaagcggc tgctgcgcct ccacctgcag cgtgtccggc
     1381 agcatcgccc gggccagttc gcccggcgcg gagagacagg cctccagcat cttgcggaac
     1441 cgggcgaccc gggcccgctg ccgatcgtgc aacatctggt cccgggccgc gggatccagg
     1501 tcgggccagt ccgctggatc gggcgcggcc tggaacactt cggccagcgc cgcggcgttc
     1561 accgcgccgg ccgacacgcc caccgcggca tcgggtgcct tgccgttgat ggtgaggagg
     1621 gcgtgggtca cgccgagctg catggcggcg tcgaacccgc cgctcgagaa cgcgatcacc
     1681 cgcaccggct ggtgcgccgt cccgatggtc ctcgggctcc ggcctggctc cggttccacg
     1741 cggggcgggg tttcgaccaa cgcgtccagc agggtgggca tggcgctacc cgacgaccgt
     1801 cttgagcagc ttcagcacga caccgcccag atcgccgaac cggccgcgga gcttcgccac
     1861 cttgtcgttc tgcgaggccg cgtcgttgac aatatcgatc agctcggcca gggccttctt
     1921 gtcggccttg gtggggagca gccgctcgat ctcggccgcg ctgagcgtgg tgacggtggc
     1981 cagctgcccg gccagctccg cgttggtcag ggcggcttct tcgctgaaat cgaacccgtt
     2041 ggacatttac cctcctgctt cctgctccct gctccctgct cgctatttcg gcttcagttt
     2101 ggcgagcgag tctttggtgg ccttgaaggt ctcgagaaac ttcgcgatcg cgctctcggc
     2161 accggcggcg ccggtcaagg ccgtcgccgc ggcgtcgctg gcatctccgg cgaaaccgag
     2221 tgcctgtttc tgggcctcga gcagacccag cttgcgcagg atcacgtcct gttcctgctg
     2281 cacccggacc gcggagccaa ggtacgcgct gatgctggac tgggaccgtt gcaggtcggc
     2341 gtagacgtcg gccagctggg ccaggacgaa gcgctcctgc tcgtcgatgg gaagcagcag
     2401 gctgtcccgg cgcagcgtga tctggcgctc gacctcggtg gcaaagtcga gcatgacgac
     2461 gccgaggcgg gcgcgatgct gctggagcgc ggaatcgatc gcctggcgca gcgcggcgcg
     2521 aaccgcaggc ggaaggttgg cctcgccggt cacgctcacg ttgatcgcgt tggcatcgag
     2581 cgaagccacg gcgtaggcaa cgtcgagctg gctccgaaac tgctggttgg cgacggcgcg
     2641 ccggaggaag ctcgggaccc agacctgggt cagaaactgg tcgacgtcct ggcggagccg
     2701 ggcatagtag agccggacga aggcttcgtg cgaggcgcgg accgcggaga tctgctcgcc
     2761 gacgacttcg gaaagggtga gggtagcttg cggggcgcgg atgcaaccgg ttgggcccgc
     2821 ggtggcaacg gcgatgagga gcgtgagtcg gacgggaacg ggttgcatgg gatcctacgc
     2881 gggaccacag ggtccagggc gatcctgacg gctttcgcgc tggtgatgga tcaatgatgt
     2941 gatgccagtg ggatcgcgca agctatcaag gttgataggg tatcccctat caaccttgat
     3001 agggccgccc cccccttgac gggtggttag atagtttgat attcattgta ctatgaccga
     3061 gccgaccagc ctgctgacca gggggcagtt cgaccggatc gccaaggccc tggcggaccc
     3121 gcggcggttc gccctgctgc aggcgatcgc cagcgatcac gactacccct gctcgcagct
     3181 gtgccgagat ttccccgtga ccaaggctac catctcgcat cacctcaaag agctggtacg
     3241 ggcgggcctg gtgcaggccg accggcaggg ccagttcatg aactaccggg tccgccgcga
     3301 agtgctggcc gcttacagcg ccgagctgct gacccgtctg tccccccgca gtctcgcggt
     3361 agaaacctca gccgagtaag gtcgcaaatg attgccgtta aagggtttgt tacgtgatgt
     3421 tagttagatg gtaataaaac tgtaatacct gagctgtaga ttggcttcac ctgcgtttgt
     3481 cgttcgaaga cggaaagcac acagaaacct gaagtggatt cctacggagg tagtaccgtc
     3541 atgagtcgca gccagaaagt tcggtcaccg ggcgggattg gagcgatcgt cctgctagtc
     3601 accctggtcg ggagcggcgg ggcgctcgcc gcgtggaagg gttcttcgct cagggactcg
     3661 gcggccgctt cggccaatca gcccgagccc atggaagtcg tcaccgccgc gctggcgagc
     3721 tcgcgcgagt atcggccaac tgccacggcc atcggtaccg tgctagccct ccagtcggtc
     3781 acgctccgga acgagctggc cggcacggtc cggcacgttg cgctggcccc gggtcgcatc
     3841 gtcgaacgcg gcacggtgct ggtggcgctc gacgtatcgg tggagcgggc cgatctgcag
     3901 gcccaggagg cccggctcgc cctcaccgag accaccctca accggctcca gcggctgctc
     3961 gagccccagg ccgtttcggc ggaagaggtg gaccgggcga gggccgagcg tgacgtggcc
     4021 caggccgaga tcgcgcggat caaggcgatc atcgagcgga agacggttcg cgcgccgttc
     4081 cgcgcccaag tgggacttgc cgacgtgcac ccggggcaat acctgaccga gggtaccgtg
     4141 ctcaccacgc tccagggcgt ggcggacgcg gctcacgtgg acttcaccgt ggcgcaggac
     4201 gtggccgcgc ggctgcacgt gggtgacagt gtgctggtgg ccccgaccaa cgatgccacg
     4261 ccggttccgg cccggatcgt cgcgatcgat tcccgggtgg atccgaccac ccggaacgcg
     4321 atggtgcgcg cccgtttgaa cggtgaggtc ccggtggcgt cacccggtgc atcggtgcgg
     4381 gtccgggtgc cgctcggcgc cccgacccag gccgtggtgg tgccggtgag tgcgctccgg
     4441 aagggcccct cgggcgacca cgtgttcgtg atcacgcagg acgaccaggg gaaggcccgg
     4501 gcccatctgc ggccggtgca ggcgggcgac gtgttaggcg acgaggtcat gattctcacc
     4561 ggcgtgaaag ccggggagca ggtggccgcg tcaggcgcgt tcaagctgcg ggaaggcgtg
     4621 ctggtgacgc tcgcgggtga agccgatacg ctggggaacg ggggtcacta atgtcggata
     4681 cacctcgccg cgccatcacc gatctattca tccggcatcc ggtgatcgcc ctggtcgtga
     4741 acctggtcat cgtgctgctg ggctggcggg ctctttcgtc cctgcccatc cagcagtacc
     4801 cgcaggtcga gagctcgtcc gtggtgatca ccacggtcta ttacggcgcc agcgccgaga
     4861 ccgtccgggg cttcctcacg acaccgatcg agcgcgcggt gtcggccatg ggcggcgtgg
     4921 actatatcga gtccaccagc cgggccggtg tgagcaccat cacagtgcgg ctcaagctca
     4981 actacaacag cacggcggcc ctggcagagg tcacggctcg gctgcagcag gtgcgctcgg
     5041 agctgccgcc cgacgccgag ccgccggtgg tggatatcca gcggaccgac cggccctacg
     5101 cgtcgttcta cctgagcttt gcctcccccg agcggagcgt gcctgagctg accgactggc
     5161 tctcgcgcac cctgcagccc cagttcgcca ccctggaggg ggtgcagcgg gtcagcaaca
     5221 gcgagggtgg ccggcccatc gccatgcggg tctggatcga tcccgaccgg ctagccgccg
     5281 tcaacctcgc gccgggcgac gtgtacgccg cgctccagcg caacaactac ctggcggcgg
     5341 tgggccagac caagggcaac ctggtccagg tgaacctgct ggcgaacacc gatctccgca
     5401 ccccggagga gttcgccaac ctgatcgtgg ccgatcgcgg cggtgctgtc gtgcggttga
     5461 gagatgtggc ccaggttgag ctgggttcgg aggaggcgca gctggtcgcc aagtacaaca
     5521 accaggaggc ggtgtacctc ggcgtgtggc cgctccccgg tgcgaatgag atcgcggtgg
     5581 gcgaccggct gctcggggag atagagcgcg tgcggtccac cctgcccaag gacatcgaga
     5641 tgcggctggt gtgggacggc accgtgttca tgcgtgacgc gctgcgcgaa atcagcaaga
     5701 cgctgggcga gaccatgctg atcgtggcgt tcgtggtgtt cctgttcctg ggctcggtcc
     5761 gcaccgccct ggtgccgctg gttgccatgc cgatctcgct gatcggcgcc ggaatcttca
     5821 tggccgcgtt cggtttcagc ctcaacctgc tcaccattct cgccatcgtg ctctcggtag
     5881 ggctggtggt ggacgatgcg atcgtcgtgg tggagaacgt ggagcgccac gtccaggagg
     5941 gccgctcccg gatcgacgcg gccctgctgg gcgcccggga gctgatcggc ccgatcatcg
     6001 cgatgaccat caccctggcc gcggtctaca ccccgctcgc gttccagggc gggctcaccg
     6061 gctcgctctt cctggagttc gccatcacgc tggcctccgc cgtggtgttg tcggggatcg
     6121 tcgcggtgac gctctccccg gtgatgagct cgcggatggt gcatccggcc gggaaggaag
     6181 gccggctcac cgcgctggtg aaccgcgggt tcgaccgggt ccggcaggcc tacgggcggc
     6241 tgctcgacgg tgcgatgggc atgcggtggg cgatcgtcac cgcctcgctg ctggtgaccg
     6301 tggcggcctg gccgctctac accatgtcgc ggcgggagtt agccccggtc gaggaccaga
     6361 gccacatcag cctcttcttc gagtcggccc cggatgccac cctctcggcc accaaccggg
     6421 cgtcgctgga cgtggtgcag gccatcaacg cgttcccgga gaaccgcttc atgtggtcgc
     6481 tgacggccaa ctggggcggg ttcggcggct tcgtggcgaa ggattggaag gaacgggagc
     6541 gctccaccga gcagatgtac ggcgaggtgt acggcgcggt atcgcagatc ccgggcctcc
     6601 gggttttccc ccggctcgac ccgccgcttc ccacgccggg ccagtacgac gtggagctgg
     6661 tgctggagag cgacgtgccg ccggagcaga tgctcgagac ggtgggcgcg gtggtcggcg
     6721 ccggctggca gagcggcaag ttcctgtatg tcgacaccga cctcaagatc gatctgcccc
     6781 aggcgaccgt ggtgatcgac cgcgaccagg tggccgacct ggggctcgac ctggccacgg
     6841 tgggacgcga actgggcacg ctgttaggcg gcggctacgt caaccggttc aactggttcg
     6901 accggagcta caaggtcatt ccccagattg gcgagaagga ccgcgccacg gtagcgcccc
     6961 tgctcgactt gaagatcaag acgccgagcg gtgagctggt gccggtgtcg accttcaccc
     7021 ggatcgagac ccatccggcg ccgcggaccc tcaaccggtt cgggcagcgc aacgcggtgc
     7081 gggtgttcgg cggggtcaag cccggtgtca ccaaggacga aggactccag gtgctggagc
     7141 aggcggctac ggccgcggcc gcgccgggca tggtgatgga ctacgccggc gagtcgcgcc
     7201 agatccgccg cgagggcagc gcgctggtcg tcacactcgg ctttgccgtg gtcctcatct
     7261 acctggtgct ggcggctcag ttccaaagct tccgcgatcc gctgatcgtg ctgctgggct
     7321 cggtgccgct ggcgatttcc ggagcgctgc tcttcagctt cctggatctg acgaccatca
     7381 acatctactc gcaggtcggc ctgatcacgt tggtagggct gatcgcgaag aacggcattc
     7441 tgatcgtcga gttcgccaac cggctgcagg agcgcggact ggagaagctc gccgcccttc
     7501 gggaggcgtc gctcacccgg cttcgtccgg tgctgatgac caccgcggcc accatcttcg
     7561 ggcactttcc gctggtgctg gtgagcggcc caggctccgc ggcccggaac agcatcggga
     7621 ccatcctggt ggccggcatg gcggtgggga cgttgttcac cctattcgtg gtgccggtgt
     7681 tctactcgct gatcgcgaga gatcaccggg ccgttgcaaa agagaccgag tcagcgggtg
     7741 gattgcagcc cgcgctcgag ggggtcggta atgcgtaacg tagcttcact gttcactgtc
     7801 gccctgttca ccggttcact gtcaacggtc aacagtgaac gggtggaggc tcaggatccc
     7861 ggacccgggc cggcgtcggt cacgttttgg ggtcagctgg gcgacaccac cctggcccgc
     7921 ctaacggccg aggcgctccg agcgaaccgg gacgtacagg tggcgcaggc gcgggtgcgg
     7981 caggcccggg ccgcccggat gaacgcggcg ctcgatctgg cacccacagt gacggtggcg
     8041 ggtgggttca cccgccagcg gctctcgcag gcccagttcg ggatcgcggt ccccgaccgg
     8101 agtctctggg acacggagtt ccgcgccgcg tgggaagtcg atgtcttcgg ccggctccgc
     8161 aagaacttga ggggccagga tgcgctgtcc gagtcggccc gggaggacgt gcgggatgtg
     8221 gggcggctgg tgacggccga gctggcgacg gcgtacttcg agctgcgggg ggctcaggac
     8281 cagctcctgg tggcgcagcg gaacgccgag aaccagcgcc gcaccttgca gctcacccgt
     8341 aaccggctcg atgccgggcg ggggaccgcg ttcgataccg agcgggccca ggcgcagttg
     8401 agcaccaccc tggcgctggt cccgactttc gagtcgcgga tcgccgcggc ccggcaccgg
     8461 atcggggtcc tggtgggacg cgatcccaag gtcgtgggga ccgagttagc cggaccgtgc
     8521 tcggcggagg tggacgagtc gtgctcggtg cccgagctgc cccgggaggt agtgccggtc
     8581 gaggtcgatt cgctgattcg atcgcggccg gacgtccggg cggccgagcg ccgtgtggcg
     8641 gcggaagcgg cgtttgtcgg cgcggccaag gccgattacc tgccccggct ctcggtgggc
     8701 gggactgccg ggttcacctc gaccgcgttc gactcgttag gccgatccgg cagcgggcgt
     8761 tatgcggtgg ggccggtgat cacctggccg ttgctcaacc tgggccgggt gaaggcgggg
     8821 gtggatgcag cccgggggct cgaggccgag gcccgggccc ggtacgagca gaccgtgctg
     8881 ctggcgcggg aggagctgga gaccgcgcgg gtggcctatg ccagagcgca ggagcggttg
     8941 actcagctcg aggcggcggc ggcggcgagc aaccgggcgg cggaattggc ccggctccgg
     9001 ttcgaaggtg gggtagcgga cttcctccag gtgctggacg cggagcggtc gctgctggcg
     9061 gcgcaggatc agctggcgca ggggcggacc gacgcggtca cggcgctggt ggcggtgtat
     9121 cgggcggttg gtggagggga ttccggggcg cgctgaacct gcgttctccg agagggatcc
     9181 ggccggcggt gccgcccctc gcgccggccg tgcaacagac ggggcagaac cttgatgggg
     9241 gatgtgaaat gattactcgt tcgagcttga gcgcggcgct ggtcctgtcg ctcttggcgc
     9301 cggctgtcct ctcagctcaa gcggcaagcg atcggccgag gctggtcttc ttcgccaacg
     9361 ggggaggcaa ctcgccggtc accgacctga atgaagccgg cacggcctcg ctcaagaccg
     9421 gctggaccgc cggggccgga gtgggagtgc aggtcaaccc ctacctggcc atccggggca
     9481 gctttaactt cgcgcgttcc gaaggagaag gcccggccgc gggactgctc accggtcaga
     9541 agttgaacca ctacttctac ggtggcgatg tacagctccg gtatccgacc agcagcggct
     9601 tcgcgccgta tttgctgctg ggcgcgggag cggtgaccat cgacaacacc gatctcaaca
     9661 cctttgagag attcaccaag ttcgccggca aaggcggcct gggtgtggag tacgtgcttc
     9721 cccgcagcaa cgtcggcctc ttcgtccagg gcacgacgta cgtctacggc tacgatcgcg
     9781 gggggttcga caagacccag gtggacctgc tgtggaccgg gggtctgagc taccgtctgc
     9841 cgctctaatc cttcgttctg gaccctaacg tcttcatggg caccgtcatg accagcttgc
     9901 ttccatcttg tggaagctcc acccttgcct cccctacccg aggtcttggt tgtgacggta
     9961 tcgccctcct cgatcagctc gacgccagcc attttcaaag atgcatcagg aacggaggtt
    10021 agtgaaacca atagagacgc cggtgccatc ataatgctgc agggctgatc cgcctgatcc
    10081 gttacatcgg aagcatccgg ccgacactcc atcctgggtg ccggctgcgc tgaacggcga
    10141 tcgaggaccg agggtcagca cggatgctgc cgatgcaacg gatttggcgg atcgttttct
    10201 tttgaaatga acagtgtcga agtttgggtt cggggcgcgc gagatcaatc cgcccgatcc
    10261 gtcccatccg agcatccggc cgaccctcca taaggaaggc ttcagcgagc cccgactcct
    10321 cgccgagttc tgaggggtgg ccgtggccgc ggcatgtggg cattataggg gacgtgctaa
    10381 cccttcaaga acggctcacc caccatctcg ccggacgcta cgccttcgaa cgggagctgg
    10441 gccacggggg catggccgtc gtgttcctgg cccgggacct ccgccacgac cgccgggtcg
    10501 ccctcaaggt gttgcggccg gagatctccg ccgagatcgg ggccgagcgg tttctccgcg
    10561 aggtcaagat ggcggcgggg ctcacccacc cgcacgtcct gaccgtctac gactccgggg
    10621 aggtcgacgg gctgctcttc tacgtaatgc ccaacatgga aggccggtcg ctccgggagc
    10681 ggctcgagcg cgagcggcag cttcccctcg aggaggccat ccgtatcacc cgcgaggtcg
    10741 cctccgccct ggactacgcc catcgccagc acgtggtgca ccgcgacatc aagcccgaga
    10801 acattctgtt ccacgagggg aatgcgatgg tcgccgactt cgggatcggc aaggcgctga
    10861 gcggcgaggg ttccatcacc cagaccggca tggccatagg cactccggcc tacatgagtc
    10921 ccgagcaggc cggcggggag agcgcggtcg acggccggag cgatctctac agcttgggct
    10981 gcgtcttcta cgagatgctc tccggcgagc cgcccttcac cgggcccacg ccgcaggccg
    11041 tcatcgccaa gcgtttcatc tcg
//
LOCUS       DASWKS010000555         8465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_297200, whole genome shotgun sequence.
ACCESSION   DASWKS010000555 DASWKS010000000
VERSION     DASWKS010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297200"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..2927
                     /gene="gcvP"
                     /locus_tag="VGA78_15895"
     CDS             63..2927
                     /gene="gcvP"
                     /locus_tag="VGA78_15895"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEX9895412.1"
                     /translation="MSSLPQIPPPGFASRHLGPRPDDIEAMLELLGFESLDGLIDAVV
                     PESIRLRRPMALPPARSEAEALAALKKMAGQNQRFRSYIGLGYHDTITPTVIQRNILE
                     NPGWYTAYTPYQPEIAQGRLEALLNFQTMVADLTALPIANASLLDEATAAAEAMALTL
                     GVVEHGEAPRYLVDQRCHPQTIAVVRTRAEARGVRVETGLPEQFQFGNQVVGCLLQYP
                     ATDGAIHDFRLVVERAHAAKALVTVATDLLALTLLAPPGEWGADIAVGNSQRFGVPMG
                     YGGPHAAFLATREEFKRHLPGRLIGVSKDRSGQPALRMALQTREQHIRREKATSNVCT
                     AQVLLAVIAGMYGVYHGPEGLRAIAARVHRRTAALAKALQSLGYRLGHTAFFDTLAVE
                     TDAATAARLHEAARALRINLRSLDSTRVGVSLDETVTEADLQDLVRIFALGRSAPAPA
                     LDSEALPGAFLRSSAFMTHPVFHRHRSETEMLRYMRRLEARDLSLTAAMIPLGSCTMK
                     LNASTEMIPVTWPEFGGLHPFAPVEQARGYAELFDDLERWLTEITGFAAISLQPNAGS
                     QGEFAGLLVIRAYHHDQGDTHRDICLIPQSAHGTNPASAVMAGLKVVVVRTDRDGNID
                     LADLRSQAQAHRARLAAIMVTYPSTHGVFEAGIRELCEIVHANGGQVYMDGANMNAQV
                     GLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVAAHLAPYLPDHPIVPFGRAKS
                     CGTISAAPWGSPSILPISWAYIAMMGPDGLTEATRVAILNANYIARKLADQFPVLYSG
                     PGGLVAHECILDTRAFKQSAGVDVEDIAKRLIDYGFHPPTVSFPVAGTLMVEPTESEP
                     LDELDRFVEAMRSIREEIRAVEQGGQPKGNNVLSNAPHTMQQVASDGWDRPYGREQAG
                     FPTAATRIHKSWPTVSRIDSAYGDRNLVCVCPPVEEYAGR"
     gene            2990..3787
                     /locus_tag="VGA78_15900"
     CDS             2990..3787
                     /locus_tag="VGA78_15900"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895413.1"
                     /translation="MINRQSTIDNRQSLWHFWLDSSPRPGWQNMAIDTALLDLAAESG
                     RATLRLYRWQPFCLSLGRHEPALRRYGRDRIAALGVDVVRRPTGGRAVWHARELTYAV
                     AAPASGTLREAYRGIHSLFVAAIRSLGAEASLAPEPRRVPGPADGACFAAPVGGEVLV
                     RGRKVLGSAQLRQSSAFLQHGSLLLEDDQHLVHQLAGEAGDVAPELPLSRAVGRRIEF
                     EEAAHAVERAAVDWTGPWRPLGDPTAVLERANRHAARFRSTEWTWER"
     gene            3876..5501
                     /locus_tag="VGA78_15905"
     CDS             3876..5501
                     /locus_tag="VGA78_15905"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX9895414.1"
                     /translation="MRRSAILALVLVCPAMASSQNAIPGTIVIVVGAEATAPVPTLSN
                     LKANTDVADLMFLRLARIGPDFVTAGDRGFTPELAQRWTRRDSLTLVFELDPRARWHD
                     GRPVNARDVVFSFDRIRRDTADAQKTVLLRSVSSVTAEGERTVVVGFSRVYAEQFYDA
                     VWHVQPLPAHLLDTIPKGRLAASPFVQHPIGNGPYRFSRREPGRQVELVANPDFFLGR
                     PGLGRVVFLLARDAEAQINLMLDGTGDALESIIPVSNVPRVKAKPDLRILAIPTTGVG
                     YLLFNQRAYGDRGQPHPILADVEVRRALSQALDRRGMTRATFGDWAAVPEGPVSQLHW
                     IREPGVQLTRHDPAGARMTLERRGWRDSDGDGILDRNGQPLSLRLNFPGTSAPRVMLA
                     QQVQEQWRRIGVQVELVRLDGPVWAERRAKGEFDIDFAAASLDPSPSGMVQSWSCAGR
                     GGSNVAQYCNPVVDSLLDAAIAGRGDTRLAWREVVRRLVDDAPAVFLYAPSTPLAIHT
                     RYERVAVSPESYWRAIWRWRVRPGRELPRDRVP"
     gene            5506..6480
                     /locus_tag="VGA78_15910"
     CDS             5506..6480
                     /locus_tag="VGA78_15910"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895415.1"
                     /translation="MAGWAVRRLLQAGLTFAASLLLLFVIMRITPGDPLVRLDADASL
                     TPVEADVLRRRFGLDQPLGRQLVSWLSGVARGDLGVSIGHYPDRVGSLLASRLPATLL
                     LGGTVLLVNFTAGIWLGVLQARHRGRRLDRWLTRISLTGYAMPAFWLGLVLVSFVSLR
                     WGLLPAAQMTDPLLSPDAPLLTRALDVLRHLLLPAGTLAVVTIAGTMRLQRSAMLEAM
                     REDFVHSARARGLTERRVVWGHAWRNAISPVLTLFGLSLPVLVTGTVFVEYVFNWPGL
                     GSLAAEAIATRDYPLLMGCALLVSGLVVAGGVITDAGYLALDPRVRSE"
     gene            6477..7319
                     /locus_tag="VGA78_15915"
     CDS             6477..7319
                     /locus_tag="VGA78_15915"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895416.1"
                     /translation="MRGSLWEAFYRAIRSPGGGMGVVVLAVLALLSVLAPPFLPDPAA
                     IPDAIRGALPPGTGHPLGTDSLNRDILARLVTGGRISLGIAGFATLISLTLGTTVGLV
                     AGYTGGAVDSILMRMVDGAMAIPRLFILLLLVLVWDRIPVPALILVIGATGWFATSRL
                     VRGEVLRLRHQPFVVAAESLGAGPGRIMGQHLLPNVAGPLIVTATLGVGDVILLEAGL
                     SFLGLGIQPPMPSWGGMILDARSVMTIAPWAGGFPGLAIVITVLAANLLGEALRAAID
                     PRTA"
     gene            7316..8317
                     /locus_tag="VGA78_15920"
     CDS             7316..8317
                     /locus_tag="VGA78_15920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895417.1"
                     /translation="MTLLDVRDLRLDFPVPGGVMHPVDGVSFSIAKGEVLALVGESGC
                     GKSLTSLALLRLVPPPGRIADGSGISLDGVDLLGLDPGAMRQVRGGRIGMVFQDPMTS
                     LNPVLTAGDQVVETVRAHLPVTRAEAKQRAIRLLTEVGIPDPADRFNAYPHQLSGGLR
                     QRVMIAIALAAEPALLIADEPTTALDVTVQAQILELLDGLRRTHGMAVLLITHDLGVV
                     AGRADRVAVMYAGQIVETADTGALFQRPSHPYTQALFASIPRLEGPVGRLKSIPGSVP
                     QPSDWPTGCRFHPRCPFAFEPCASAVPPMFQPGPGHDAKCWLLDPARLAAGPRIFSS"
BASE COUNT         1223 a         2977 c         2824 g         1441 t
ORIGIN      
        1 gccggcccac ccaccttcga ctgtcttcga ccgccttcga ccgccttcga ccatccagcg
       61 taatgtcctc actgcctcag atccccccgc ccggtttcgc cagccgacac ctgggccctc
      121 gacccgatga catcgaggcg atgctcgagc tccttgggtt cgagtcgctc gacgggctga
      181 tcgacgcggt cgttcccgag tccatccgat tgcgccggcc catggcgctg ccgcccgcac
      241 ggtcagaagc cgaggccctc gcggcgctca agaaaatggc cggccagaac cagcggtttc
      301 gttcctacat tggtctgggg taccacgata ctatcacccc cacggtgatc cagcggaaca
      361 tcctggaaaa ccccggttgg tacaccgcgt atacgcccta tcagccggag atcgcccagg
      421 gacggctcga ggcgttgctc aacttccaga ccatggtggc ggatctcacc gccctgccca
      481 tcgcgaacgc cagcctcctc gatgaggcga ccgccgccgc cgaggcgatg gcgctgacgc
      541 tgggcgtcgt ggagcacggc gaggcgcccc gctatctggt ggaccagcgt tgtcaccctc
      601 agaccatcgc ggtggtgcgg acccgggccg aggccagggg agtccgggtg gaaaccgggc
      661 tgccggagca attccagttc ggcaaccagg tggtgggctg cctgctgcaa taccccgcga
      721 ccgatggtgc gatccacgac ttccgtctcg tggtcgagcg ggcccatgcg gccaaggccc
      781 tggtgacggt ggccaccgac ctgctggcct tgacgctgct ggcgcctccg ggtgaatggg
      841 gcgccgacat cgccgtcggc aactcccagc gcttcggggt tcccatggga tacggcggcc
      901 cccacgctgc ctttctcgcg acccgcgaag aattcaaacg ccaccttccc ggccgcctca
      961 tcggcgtctc caaggaccgg agcggccagc cggccctccg gatggcgctc cagacccggg
     1021 agcaacacat ccggcgcgag aaggccacca gcaacgtctg caccgcccaa gtgctgctcg
     1081 cggtgatcgc cggcatgtac ggcgtatatc acggacccga aggactccgg gccatcgccg
     1141 cccgggtgca ccgccgcacc gccgcgctgg ccaaggcgct ccagagcctg ggctaccggc
     1201 tggggcacac cgccttcttc gataccctcg cggtcgagac cgacgcggcg acggcggctc
     1261 ggctccatga ggccgcgcgg gcgctccgga tcaaccttcg gtcgctggac tcgacccggg
     1321 tgggcgtgtc actggacgag acggtcactg aagcggacct ccaggatctg gtgcggatct
     1381 tcgcgctggg acgaagcgcg ccggcgccgg cgctcgactc cgaggcgctg cccggcgcgt
     1441 tcctgcgttc cagcgccttc atgactcatc cggtcttcca ccgccaccgc agcgaaaccg
     1501 agatgctccg gtacatgcgg cggctggaag cgcgggatct gtccctcacg gccgcgatga
     1561 tcccgctcgg ctcgtgcacc atgaagctca acgccagcac cgagatgatc ccggtcacct
     1621 ggcccgagtt cggtggcctg catcccttcg cgccggtgga gcaggcccgg ggctatgccg
     1681 aattgttcga cgacctggaa cggtggctga cggagatcac cggtttcgcg gccatctcgt
     1741 tgcagcctaa cgccggctcc cagggcgaat tcgccggcct gctggtgatc cgggcctacc
     1801 atcacgacca gggcgacacc catcgcgaca tctgcctgat cccccagtcg gcccacggca
     1861 ccaacccggc cagcgcggtc atggccgggc tcaaggtggt ggtggtaagg accgaccggg
     1921 acggcaacat cgatctggcg gatctgcggt cgcaggccca ggcccaccgc gcccggctgg
     1981 ccgcgatcat ggtgacctac ccctcgaccc atggggtgtt cgaagccggc attcgcgagc
     2041 tgtgtgaaat cgtgcacgcc aacggcggcc aggtgtacat ggacggtgcc aacatgaacg
     2101 ctcaggtggg gttgtgccgc ccgggtgaca tcggcgccga cgtctgccac ctcaacctgc
     2161 acaagacctt ctgtatccct cacggcgggg gcggccccgg catgggcccc atcggcgtgg
     2221 ccgcccacct ggcgccctac ctcccggatc acccgatcgt cccgttcggc cgggcgaaat
     2281 cgtgcgggac catctcggcg gcgccgtggg ggagcccctc gattctcccg atctcctggg
     2341 cctacatcgc gatgatggga ccggacggtc tgaccgaagc cacccgggtg gccatcctca
     2401 acgctaacta catcgcccgc aagctggccg atcagttccc ggtgctctac agcggccccg
     2461 gagggctggt agcccacgag tgcattctcg atacccgcgc gttcaagcag agcgcgggcg
     2521 tggacgtcga ggacatcgcc aaacggctca tcgactatgg ctttcatccg ccgacggttt
     2581 cgttcccggt ggcgggcacc ctgatggtgg agccgaccga gtccgagccg ctggacgagc
     2641 tggaccggtt cgtggaagcg atgcgctcga ttcgggaaga gatccgcgca gtggagcagg
     2701 gcggacagcc gaagggcaac aacgtactct ccaacgcccc ccacaccatg cagcaggtgg
     2761 cgtccgacgg gtgggaccgg ccttacggcc gggagcaggc cggcttcccc accgccgcca
     2821 cccggatcca caaatcgtgg cccacggtca gccggatcga ctccgcctac ggagaccgga
     2881 acctggtgtg cgtctgcccg ccggtggagg agtacgcggg gagatgagcc attgacgatt
     2941 gacgattgac gattgacgat tacgggcacc ggtatcttgc gaaaccgacg tgattaatcg
     3001 tcaatcgaca atcgacaatc gtcaatcgct ttggcatttc tggctcgact cctctccccg
     3061 ccccggctgg cagaacatgg cgatcgacac ggcgctgctc gatctcgccg cggaatccgg
     3121 ccgggccacc ctgagactgt accgctggca gccgttctgc ctctccttgg gccgccatga
     3181 acccgccttg cgccgctatg gccgggaccg gatcgcggcg ctgggcgtcg acgtggtgcg
     3241 gcgtccaacc ggcggtcggg cggtctggca tgcccgagag ctgacctacg cggtggcggc
     3301 ccctgcctcg ggaacgctgc gcgaggccta ccgcggcatc cactcccttt tcgtcgccgc
     3361 catccggagc ctcggggccg aggccagcct cgcgcctgag ccgcgccgtg tgcccggccc
     3421 cgccgatgga gcctgtttcg ccgcgccggt cggcggcgaa gtcctggtcc ggggacggaa
     3481 ggtcctggga agcgcccaac tgcggcaatc ctccgccttc ctgcagcacg gctctttgct
     3541 cctcgaggac gaccaacacc tggtccacca gttggccggt gaggcaggcg atgtggcccc
     3601 ggaattgcca ctcagccggg ccgtggggcg tcgaatcgag tttgaggaag ccgcgcacgc
     3661 tgtagaacgg gccgcggtcg actggaccgg gccgtggcgg cccctcggcg acccgaccgc
     3721 cgtcctggag cgagccaacc ggcacgcagc tcgcttccgc tcgaccgaat ggacgtggga
     3781 gcgataaccc cacccccgtc caggtctcgc gactcgcgac cggtgccgcg cgacttatct
     3841 tgtaacaggc cattatgccc agaaagagga tctgtatgcg ccggtccgcc atcctggcgc
     3901 tggttctggt gtgtccggcc atggcctcgt cccagaacgc gattcctggc accattgtca
     3961 tcgtggtggg tgccgaagcg accgcgccgg taccgacgct cagcaacctg aaggccaaca
     4021 ccgacgtcgc cgacctcatg ttcctgcgcc tggcgcggat cgggccggac ttcgtgacgg
     4081 cgggtgatcg cggttttacc cccgagctgg cccagcgctg gactcggcgt gattcgctga
     4141 ccctggtatt cgagctggat ccgcgggccc gctggcacga cggccgaccc gttaacgccc
     4201 gtgatgtcgt cttctcgttc gaccggatcc gccgcgacac ggccgacgcg cagaagacgg
     4261 tcctgctgcg ctcggtgagc tcggtaaccg ccgagggcga gcgtaccgtg gtggttggat
     4321 tctcccgggt gtacgccgaa cagttctacg atgcggtatg gcacgtccaa ccgctgccgg
     4381 cccatctgct cgacaccatt cccaagggcc ggctggcggc gtcgccgttc gtccagcatc
     4441 cgatcggcaa cggaccctat cgcttctccc gaagggagcc cggccgccag gtcgagctgg
     4501 tggccaaccc ggatttcttt ctgggccgtc ccgggctcgg tcgcgtggtg ttcctgctgg
     4561 cccgcgatgc cgaagctcag atcaacctga tgctcgacgg caccggggac gcgctggaga
     4621 gcatcatccc ggtgagtaac gtccctcggg tcaaggccaa acccgacctg cgcatcctgg
     4681 ccatcccaac gaccggggtg ggctacctgc tcttcaacca gcgggcctat ggcgatcgcg
     4741 gccagcccca tcccatcctg gcggacgtag aagttcggcg ggcgctgagc caggccctcg
     4801 accgcagagg aatgacccgg gccacattcg gtgactgggc ggcggtgccg gaaggccccg
     4861 tttcccagct gcattggatt cgtgaaccgg gggtgcaatt gacccggcac gatcccgctg
     4921 gcgcacggat gacgctggaa cgacggggtt ggcgtgacag cgacggcgac ggcattctcg
     4981 atcgcaacgg ccaacccttg tccctgcggc tcaacttccc gggcaccagt gccccccggg
     5041 tgatgctggc gcagcaagtc caggaacagt ggcgccggat cggcgtccag gtggagctgg
     5101 tccgactgga cgggccggta tgggccgagc ggcgcgccaa aggcgagttc gacatcgact
     5161 tcgccgcggc cagcctggat cccagtccgt ccggtatggt ccagagctgg agctgcgccg
     5221 gccgaggcgg ctccaacgtg gcccagtact gcaatcccgt ggtcgactcg ctgctcgatg
     5281 ccgcaatcgc gggtcggggc gatacccggc tggcctggcg cgaggtggtg cgacggctgg
     5341 tcgacgacgc gcccgctgtc ttcctgtacg cgccatcgac tccgctcgcg atccacaccc
     5401 gctacgagcg ggtggcggtc agcccggaat cgtattggcg cgcgatctgg cgctggcggg
     5461 tccggccggg tcgcgaactc ccccgagacc gggtaccctg agccggtggc cggctgggcg
     5521 gtccggcgac tgctgcaggc cggcctgacg ttcgcggcca gcctccttct cctgttcgtc
     5581 atcatgcgga tcacaccggg cgatccgctg gtccggctcg atgccgatgc gtcgctgacg
     5641 ccggtcgagg ccgacgtcct gcggcgccgc ttcgggctgg atcaaccgct gggtcgccag
     5701 ctggtgagct ggctgagcgg cgtggcacgg ggcgatctgg gcgtctcaat cggacactac
     5761 cccgaccggg tcggttccct gctcgcctcc cgcctccccg ctaccttgct gttaggcggc
     5821 accgttctgc tcgtcaattt tacggccggc atctggctcg gagtgctgca ggcccggcat
     5881 cgcgggcgcc ggctcgaccg gtggctgacc cggatctccc tcaccggata cgccatgccg
     5941 gcgttctggc tggggctggt gctggtgtcc ttcgtcagct tgcgctgggg gctgctcccc
     6001 gcggcccaga tgaccgaccc cctgctctca ccggatgcgc ccctgctgac ccgcgccctc
     6061 gacgtgctcc ggcacctcct gctcccggcc gggaccctcg ccgtggtcac catcgcgggc
     6121 accatgcggc tgcagcgctc cgcgatgctg gaggcgatgc gggaggattt cgtgcactcg
     6181 gcccgggccc gcggtctcac cgagcggcgg gtggtgtggg gccacgcctg gcggaacgcg
     6241 atttccccgg tcctcaccct cttcggattg tcgcttcccg tcctggtaac cggcaccgtc
     6301 ttcgtcgaat acgtcttcaa ctggcccggc ctcggcagcc tggcggcgga ggccatcgcc
     6361 acccgggact acccgctcct gatgggctgc gccctgttgg tgtcggggtt ggtggtggcc
     6421 ggcggggtca tcaccgacgc cggatacctg gcgctcgacc ccagggtacg gagcgagtga
     6481 gagggtcact gtgggaggca ttctatcgag ccatccggtc gccgggcggc gggatgggtg
     6541 tggtggtgct ggcggtactg gcgctgctgt cggtcctcgc cccgccgttt ctccccgatc
     6601 ccgccgctat tcccgacgcc atccgggggg ccctgcctcc gggaacggga catcccctgg
     6661 gcaccgattc gctcaatcgc gatatcctgg cccgcctggt gaccggcggc cggatttcgc
     6721 tgggcatcgc ggggttcgcg accctcatct cgctgaccct gggcaccacg gtcgggctgg
     6781 tggcaggcta caccggtgga gcagtggact cgatcctgat gcggatggtc gatggcgcca
     6841 tggccatccc tcggctgttt atccttctgc tcctggtgct ggtttgggat cggattccgg
     6901 tcccggctct gatcctggtg atcggagcga ccggctggtt cgctaccagc cgcctggtcc
     6961 ggggtgaggt gcttcggctg cgacatcaac cgttcgtggt cgccgccgag tccctgggag
     7021 ccgggccggg acggatcatg gggcagcacc tgctgccgaa tgtggccgga ccgctcatcg
     7081 tcaccgcgac actcggcgtg ggtgacgtca tcctgttgga agccggtctc tcgtttcttg
     7141 gcctgggcat tcaaccgccg atgccttcct ggggaggcat gattctcgac gcccgttccg
     7201 tcatgaccat cgcgccgtgg gcgggaggct tccccggcct ggcgatcgtg atcaccgtgc
     7261 tggccgccaa tctgctgggc gaggccctgc gggccgcgat cgatccgagg accgcgtgac
     7321 gctgctcgac gtccgggacc tgcgtctgga ttttccggtt cccgggggcg tgatgcaccc
     7381 ggtggacggc gtcagcttct ccatcgccaa gggcgaggtg ctcgcgctgg tcggggaatc
     7441 cggctgcggc aagagcctca ccagcctggc gctgctgcgt ctggtccctc cgcccgggcg
     7501 gatcgcggac ggcagcggca tcagtctcga cggagtcgat ctcctgggac tcgaccccgg
     7561 cgccatgcgc caggtccgcg ggggcaggat cggcatggta ttccaggatc ccatgaccag
     7621 cctgaacccg gtcctgacgg cgggcgacca ggtggtcgag acggtgcggg cccatttgcc
     7681 ggtcacccgg gcggaggcga agcagcgcgc cattcgcctg ctgaccgaag tcggcatccc
     7741 cgatccggcc gaccgcttca acgcgtatcc ccaccagctg agcggcgggc tgcgccagcg
     7801 agtcatgatc gcgatcgcgc tggccgcgga accggccctg ctgatcgcgg atgagccgac
     7861 caccgcgctc gacgtgaccg tccaggcgca gatcctcgag ttactcgacg ggctccgccg
     7921 cacgcacggg atggcggtgc tgctcatcac ccacgacctg ggtgtggtgg cgggacgagc
     7981 cgaccgggtc gcggtgatgt acgcgggcca gatcgtggaa acggcggaca ccggggccct
     8041 atttcagcgg ccgtcccacc catacactca ggcgttgttt gcctccatcc ctcggctgga
     8101 aggcccggtg ggacggctca agtcgattcc cggttcggtg ccccagcctt ccgactggcc
     8161 aaccggctgc cgctttcatc cccgttgccc gttcgccttc gagccctgcg ccagcgccgt
     8221 gccgcccatg ttccagccgg gaccgggtca cgacgccaaa tgctggttgc tcgatccggc
     8281 gcggctggcg gcaggcccgc gcatcttctc ctcatgactg ctctgctcga ggtacaggac
     8341 ctggtcaagc actaccggtc cggcggctgg cttaccggcg gggccaagac ggtgttcgcg
     8401 gtgaacgggg tgaacttccg tatcgctccg ggtgaaaccc tggctctggt gggtgaatcc
     8461 ggctg
//
LOCUS       DASWKS010000556        10253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2897991, whole genome shotgun sequence.
ACCESSION   DASWKS010000556 DASWKS010000000
VERSION     DASWKS010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2897991"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VGA78_15925"
     CDS             complement(<1..506)
                     /locus_tag="VGA78_15925"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895418.1"
                     /translation="MLRAVAGAGLALVFLSPSPLLAQLPDSVRRQVNAVFSDYDHTNS
                     PGCALAIYRDGEIAFARGYGMANLELGIAISPRSVFDIGSTSKQFAAFAIGLLAQDGR
                     LSLDDPIRKHLPEMGTYADPITIRNLVQHTSGLRDYLGLMSLAGFNFDDVTDDQDALR
                     LITRQKAA"
     gene            complement(576..980)
                     /locus_tag="VGA78_15930"
     CDS             complement(576..980)
                     /locus_tag="VGA78_15930"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9895419.1"
                     /translation="MLLVSDIMQADVRTIAADAPVADAIMALADSHISGLPVLDRTGQ
                     LVGVVSSTDILAAEAESVEGGGLNQVATHTRVSEIMSRQPKTVDPTTPVKVAAQEMLY
                     LDVHRLLVVKDGKLMGVISQSDIVRAVASGRL"
     gene            complement(1037..2011)
                     /locus_tag="VGA78_15935"
     CDS             complement(1037..2011)
                     /locus_tag="VGA78_15935"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9895420.1"
                     /translation="MRLLFLALAALGWSCTRSEAAAPQADLAGVIQARLDSLPAISSF
                     YAKDLTTGREVAIRADVPMNTASVIKLPIMIRAYRDAEAGRLNLDQRHVVRPEELRRG
                     SGLVQTFAPGLNPTQRDLITQMIITSDNTATDLMIGAVGLERVNQLMDSLGYRATRLR
                     MTTGDLFKWIWVLTDSANARMSQREVFERGFPSDSGMAARIFRVAQDSTYWLGTITAR
                     EAGRMLEELQLGKLAGKSGTDEMLGILRRQFYSSRLPQRLQFQVGIGHKTGDIPPVLG
                     NDVGVMYPPAGPIVIAVFVNQNRGDFFALESAIGAVARDVARAWGGVK"
     gene            complement(2216..3028)
                     /locus_tag="VGA78_15940"
     CDS             complement(2216..3028)
                     /locus_tag="VGA78_15940"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX9895421.1"
                     /translation="MIRRDVVLAFLAHEIKELRGNARVLPVMLIFPVLAVLFPVILTF
                     LGPSLVEEASVDPAMGAMLKQAVTLPEFQQLSLEEALIRFALRGVAAFYLLMPVAIGS
                     TAAAFSIVGEKQQRTLEPILATPISDREFLAGKFLVCLVPTMVVTWLSAIVGVALVDS
                     ISWSRYGTLFLPDRFWLAGIGLLAPLVGAAITLVTMRLSARSVDPQSTVQASALAILP
                     GFFVVFGVFGKVLMVSFNAVLVTIVLTLVLNLWLFRGVERTFRREEILTKWK"
     gene            complement(3025..3954)
                     /locus_tag="VGA78_15945"
     CDS             complement(3025..3954)
                     /locus_tag="VGA78_15945"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895422.1"
                     /translation="MISADRLSRSFEGRPAVESLSFELPAGSLLALLGPNGAGKTTTI
                     RMLLGLIRPTAGSARVAGISLSGDEQARRQLRAACGFLTEAPGFYERRSALENLRFFG
                     RLYAAGPELEGRIERYLRELDLWEHRTKPVGAFSKGMKQRLAIIRALFHEPQVLFLDE
                     PTAGLDPEAALEVRELIAQLKTQGRTILVCTHNLAEAERLADWVGIINRRLLVFERLS
                     TLQQSLGAAISVRIRLAQSALLWDETVRRLEGPSDLKIADHHIEFRTDQADVVVPRVV
                     TALAQAGAAVVEVVPQRATLEAVYLACMRQGLE"
     gene            complement(3951..5630)
                     /locus_tag="VGA78_15950"
     CDS             complement(3951..5630)
                     /locus_tag="VGA78_15950"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9895423.1"
                     /translation="MTIGLTLLGAACQTPPNRYADLVFTDGSVLTMDSAAPRAQAVAI
                     KGGRITFVGSDSAAERWIGSRTRRVALGGRTLLPGFQDAHIHPITSGLDLMGCDLTGL
                     QAPDAVLARIRSCADSLPAGRWLVGSNWELPLFPAANPRRELLDSLAPGRPAYFTASD
                     GHSGWASSEALRLANVTRATPDPVNGRIERDRNRSPSGTLREAAMGLVSGVIPPPSTG
                     DLSAAARRVLPIMNAAGITAAQEASGSRRLLETYHELDAAGDLTVRMVVAMRADPGQG
                     LEQVDSMVSWRGQLGSPRVRATAVKIFEDGVIEARTAAMLLPYLDRPGDAGEPNWPAE
                     RLDSLVRRLVEADFTVHVHAIGDRAVRLALDAIERAEQGRERGSRRHQIAHLEVIDSS
                     DIARFARLDVIANFQALWAYPDSYIRDLTWPALGPERSRWIYPIGSVARASGPLALGS
                     DWNVSSLVPLEAIQVAITRRDPADSTGPPLLSEQAIDLMTALRAYTLGSARALGLEGE
                     TGSIAVGKLADLVVLGDDIERVSWFRIARVPVLLTLVEGVPVHGRLEDAGR"
     gene            complement(5782..8532)
                     /locus_tag="VGA78_15955"
     CDS             complement(5782..8532)
                     /locus_tag="VGA78_15955"
                     /inference="COORDINATES: protein motif:HMM:NF017263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEX9895424.1"
                     /translation="MQKGCAVLSAEQLENRRAVVSDSALLQALANRVRGRVSRVLREM
                     PPVPRVKAMLSRDGGICPTDGSSLIFDPWSPSAHRCPTCGQVVTGERHDRHWARAQHL
                     WLAERAADLAALAVLLGDEAAALRAGELLAAQAAVYLELPNQDNVLGPTHLFFSTYLE
                     SMWITSWLAAAFLLREAGLLADERTEAIDQVAEEAAALIGEFNEGLSNRQTWNAAALV
                     AIAAWFGDEELVQTSVESRTGLLGLLADGFEGGEGMWWEGENYHLFALRGMMTGIQWA
                     RVNGVDLLEDPELRTHFERALLAPSLTALPDLTFPARKDSRFGVSLAQPAYLELWEIG
                     RSWLGEGTLLNGWLQALYRVPAPKPDHYDAWLHDSGLESPIRRSAADLSWWALLAVEP
                     RPHPDDAAMAAASCFIESQGLALLRPNGSYVSLECGTAGGGHGHPDRLNLTLHAGGVH
                     WLPDPGTGSYVDPSLFWYRSVWAHNAPAVDGASPLEARCEAFDSRGNWGWARGRAGEV
                     TRTVVAGPELVFDLVELEARTARTLELPWHLQGETRVASPGTWTAAELVDQSVESVES
                     VGSVESVEKFRPSGSGPVVIEAGAGDARIRLHLAGGAELLRAAGPGLPRERTSPTFYL
                     QRITSTSTHLVTLIELVPVDGTELTVKQDGVSVRRTGSLTSLGFTASGGAQVVTPEGR
                     LDLGGVRLAPATPTHLFRDHPSWDAVALALPAWSRPALDGSLEGFDLEEPITLEGEHQ
                     YRRSEHPYDPDRFAADAWVNWNMEGLYLGVHVRKPEVVVRQAGAPPLELDNEPDDIHL
                     DGIQLYLRWPDNQVAAFVIVPDPSGAVRARRIGPEGEAQVTGAWSETDDGYLMSVAVT
                     DPRLAGLRPGIRLGFDLLINEMTSDRVRRLGQLVWSGGDGWVYLLGDRQNPERFGVLE
                     LK"
     gene            complement(8554..8733)
                     /locus_tag="VGA78_15960"
     CDS             complement(8554..8733)
                     /locus_tag="VGA78_15960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895425.1"
                     /translation="MSRDPAGTGPAGVERLRQAGLSDRAIHDATQVIAYFNYINRIAD
                     GLGVEQEDWIRPWGE"
     gene            complement(8890..9135)
                     /locus_tag="VGA78_15965"
     CDS             complement(8890..9135)
                     /locus_tag="VGA78_15965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX9895426.1"
                     /translation="MPWIHTIDPADAEGPLKEEYDRAFQRAGRLWHILRLQSVNPAVL
                     KASTAVYLAIMYGASPLSRGQREMLAVVVSRGNGCHY"
     gene            complement(9232..9765)
                     /locus_tag="VGA78_15970"
     CDS             complement(9232..9765)
                     /locus_tag="VGA78_15970"
                     /inference="COORDINATES: protein motif:HMM:NF009807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HEX9895427.1"
                     /translation="MDDLRYPIGPFRRPQALDPAARAGAIAVIARTPADFRQALSNLD
                     DRQLDTPYRPGGWTVRQVAHHVPDSHMNAYMRFKLALTEAVPTIKPYEESRWAELPDS
                     SLPIDTSLRLLEALHQRWVVLLQALTEEQWDLEFIHPESGRQRLYQLLALYAWHGPHH
                     TAHVTRLRERMGWNPNS"
     gene            complement(9779..10156)
                     /locus_tag="VGA78_15975"
     CDS             complement(9779..10156)
                     /locus_tag="VGA78_15975"
                     /inference="COORDINATES: protein motif:HMM:NF022317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2784 domain-containing protein"
                     /protein_id="HEX9895428.1"
                     /translation="MGYRLVADLVVLVHGGFILCVVLGALLVYRWPRLAWIQAPCAIW
                     GAWIEFSGSICPLTPLENHFRRLAGETGYPGGFIDHYIIPLIYPPGLSPPLQIGIGVG
                     VVAINLVAYTLLWRRLRLRRRTT"
BASE COUNT         1810 a         3521 c         3326 g         1596 t
ORIGIN      
        1 ttggccgcct tctgccgggt gatgagtcgg agcgcgtcct gatcgtcggt cacgtcgtcg
       61 aagttgaatc ccgccagtga catcaggccg agataatcgc gcagaccgct ggtgtgctgc
      121 accaggttac ggatggtgat cgggtcggcg taggtcccca tttccggaag gtgcttccgg
      181 atcggatcgt ccagcgacaa ccgcccgtcc tgcgccagca gcccgatggc aaaggcggcg
      241 aattgcttgg aggtcgatcc gatgtcgaag acgctccggg gcgagatggc gatgccgagc
      301 tccaggttcg ccatgccgta gccgcgggca aacgcgatct cgccatcgcg atagatcgcc
      361 agggcgcagc cggggctgtt ggtatggtca taatcggaga agacggcatt cacctgtcgc
      421 cgtaccgaat cgggcagctg cgccaggagc ggagaagggg agaggaatac caacgccaga
      481 ccggcaccgg ccaccgctcg aagcacagat ccccctgaga aacaccgtcc gtcagtccgt
      541 cagtccgtca gtccgtccgg ccgtccggcc gtccgttaaa gccgcccgct ggccaccgcc
      601 cgcacgatat cggactgcga tatcactccc atcagcttgc catccttcac caccagcagc
      661 cggtggacgt ccaggtacag catttcctgc gcggccacct tcaccggggt ggtgggatcg
      721 accgtcttgg gctggcggct catgatctcc gacacccggg tatgggtggc gacctggttc
      781 agaccacctc cctcaacgct ctccgcctcg gccgccagga tgtcggtact ggaaacgaca
      841 cccaccagct ggccggtccg gtccaggacc ggaaggccgg agatatgact gtctgccagc
      901 gccatgatcg cgtccgctac cggcgcgtca gccgcgatgg tgcgcacatc ggcctgcata
      961 atgtcggaaa cgagcagcat gagattcctc ctatggatgc ccggaagatc ggcccgatcg
     1021 cgaccctggg gaagccctac ttcacaccac cccaggcccg ggccacatcc cgggccacgg
     1081 cgccgatggc cgactcgagg gcgaaaaagt cgccccggtt ctggttcacg aacaccgcga
     1141 tgacgatcgg cccggccgga gggtacatca cgccgacatc gttgccgagt accgggggga
     1201 tgtccccggt cttgtggccg atgccgacct ggaattggag ccgttgcggc agccgggagc
     1261 tgtagaactg ccgccggaga atcccgagca tctcgtcggt cccggacttc ccggccagct
     1321 tacccagttg cagctcctcc agcatccggc ctgcctcccg cgccgtgatg gtccccaacc
     1381 agtaggtgga gtcctgggcc acccggaaaa tccgggcggc catcccgctg tccgagggga
     1441 agccgcgttc aaagacctcg cgctggctca tgcgcgcgtt ggcgctgtcg gtgagcaccc
     1501 agatccactt gaagagatcg ccggtggtca tgcggagccg ggtggcccga taccccaggg
     1561 agtccatcag ctggttcacc cgctccaggc ccaccgcccc gatcatcagg tcggtggcgg
     1621 tgttgtcgct ggtgatgatc atctgggtga taagatcccg ctgggtggga ttgagaccag
     1681 gcgcgaatgt ctgcaccagt ccgctgcccc gccgcagctc ttccgggcgc accacgtggc
     1741 gttgatccag attcagccgg cccgcctccg cgtcccgata ggcacggatc atgatcggca
     1801 gcttgatcac gctcgcggtg ttcatgggca catcggcccg gatcgcgacc tcccgaccgg
     1861 tggtcaggtc cttggcgtag aacgaggaaa tcgccggcag cgagtccagc cgcgcctgga
     1921 tgacgccggc caggtcggcc tgcggcgccg ccgcctcgct ccgggtgcag gaccagccca
     1981 gggcggccaa tgcaaggaag agcagacgca tgaatcctcc acgatgtgat atcgaacgtc
     2041 gtccagagcg acagtaccga acgtcatcct gagggagggg agcagggagc agggagcagg
     2101 gagcagggag caggaaacgt gggcccgcga ttcttggacc agatgggaaa cggacccagg
     2161 tccggttacc gcccctggtt cctgctccct gctccccgct cccttactgg tcacgtcact
     2221 tccacttggt cagaatctcc tcccgccgaa aggtccgttc caccccgcgg aagagccaga
     2281 ggttcagcac cagggtcagg acgatggtca ccagtaccgc gttgaagctc accataagca
     2341 ccttcccgaa caccccgaac accacgaaga accccggcag aatcgccaga gctgaggctt
     2401 gtaccgtcga ctgcggatcg accgagcggg ccgagagccg catggtgacc agggtaatgg
     2461 cggcgcccac cagcggagcc agcagaccga tccctgccag ccagaaccgg tccggcagaa
     2521 agagggtgcc gtagcgggac cagctgatgc tgtcgaccaa cgccaccccc acgatggcgg
     2581 acagccaggt cacgaccatg gtcggtacca ggcagaccag gaacttgccg gccaggaact
     2641 cccggtcgct gatgggggtc gccaggatcg gctccagggt ccgttgctgc ttctccccca
     2701 caatcgagaa cgccgccgcg gtggagccga tcgccaccgg catcagcagg tagaacgccg
     2761 cgacaccgcg cagagcgaag cggatcagag cttcttccag gctcagctgc tggaactcgg
     2821 ggagtgtcac cgcctgcttg agcatggctc ccatggccgg gtccaccgag gcctcttcga
     2881 ccaggcttgg cccgagaaac gtcaggatca cgggaaaaag gaccgcgagc accggaaaga
     2941 tcagcatgac cggcagaact cgggcgttgc cacgcagctc cttgatctcg tgagccagga
     3001 aagccagcac cacgtcgcgc cggatcattc caacccctgc cgcatgcatg cgagatagac
     3061 cgcctccagc gtggcccgct gcggcaccac ctccaccacg gccgcgccgg cctgggccag
     3121 cgcggtcacc acccggggca ccaccacatc ggcctggtcg gtccgaaact cgatatgatg
     3181 atccgcgatc ttcaggtcgg agggcccttc cagccgccgt accgtctcat cccagagcag
     3241 cgccgattgg gccagccgaa tcctcaccga aatcgccgcc cccaggctct gctgcagggt
     3301 cgagaggcgc tcgaacacca acagtcgccg attgatgatg ccgacccaat cggccaaccg
     3361 ctccgcctcg gccaggttgt gggtgcagac caggatggtc cggccctggg tcttgagctg
     3421 cgcgatcagc tcgcgcacct ccagcgccgc ttccggatcg agcccggcgg tgggctcatc
     3481 cagaaacaac acctggggct cgtggaacag cgcccggata atggccagcc gctgcttcat
     3541 tcccttggag aaggcgccca ccggtttggt ccggtgttcc cagaggtcga gctcccgcag
     3601 gtagcgttcg atccggccct cgagctccgg cccggccgcg tagagccggc cgaagaaacg
     3661 caggttttcg agcgcgctgc ggcgctcgta gaatcccggc gcctcggtga gaaagccgca
     3721 ggcggcgcga agctgacggc gggcctgctc gtctccactc agcgagatgc ccgctacccg
     3781 ggccgatccg gcagtgggcc ggatcagtcc cagcagcatg cggatggtcg tggttttgcc
     3841 cgccccgttg ggccccagca gggccagcag cgaaccggcc ggaagctcga acgaaagcga
     3901 ttccaccgcg ggacgcccct cgaagctccg gctcagccgg tcggcggaaa tcaccggccg
     3961 gcatcctcca gcctgccgtg gaccggcaca ccctcgacca gggtcagcag gaccgggacc
     4021 cgggcgatcc ggaaccaaga gacccgttcg atgtcatcgc ctaacacgac caggtcggcc
     4081 agcttcccca cggcgatcga tccggtttcc ccctcgagac ccagggcccg cgccgatccg
     4141 agcgtgtaag cccggagcgc ggtcatgagg tcgatggcct gctccgacag gagcggtgga
     4201 ccggtggaat ccgccggatc acgccgggtg atcgcgacct ggattgcctc cagcggcacc
     4261 aatgacgaga cattccagtc gctgcccaac gccagcggcc cactcgcccg cgccaccgat
     4321 ccgatcgggt agatccagcg gctgcgctcc gggcccaggg ccggccaggt gagatcccgt
     4381 atatacgaat cggggtaggc ccacagtgcc tggaagttgg cgatcacgtc gagccgggcg
     4441 aagcgagcga tatcgctgga gtcgatcacc tcgaggtgcg cgatctggtg gcgccggctg
     4501 ccccgttccc gcccctgctc cgctcgctcg atcgcgtcca gcgccagccg caccgcccgg
     4561 tcgccgatcg catgcacgtg caccgtgaag tccgcctcca ccagccggcg caccaacgaa
     4621 tcgagccgct ccgccggcca gttgggctcg cccgcatcgc cgggccgatc caggtaaggc
     4681 aggagcatcg cggcggtgcg ggcttcgatt acgccgtctt cgaagatctt gactgcggtg
     4741 gctcgcactc gaggcgaccc cagctgaccc cgccagctca ccatcgagtc cacctgctcc
     4801 aacccttgtc ccgggtcggc tcgcatcgcc accaccatgc ggaccgtcag gtcacccgcc
     4861 gcatcaagct cgtgataggt ctccagcagc ctccggctgc ccgatgcttc ctgcgcggcc
     4921 gtgatccccg cggcgttcat gatcggaagc actcgacggg ctgcagcact caggtcgccg
     4981 gtgctgggcg ggggaatcac gccggaaacc aggcccatag ccgcctcgcg cagggtgccc
     5041 gagggagagc ggttccggtc gcgctcgatc cgcccattca ctggatcggg ggtggctctg
     5101 gtgacattgg cgaggcgcag ggcctcgctg ctggcccagc ccgaatgccc atccgaggcg
     5161 gtgaagtagg ctggcctccc gggggcgagc gaatcgagca gctcgcgccg cgggttcgcg
     5221 gccgggaaga gcggcagctc ccagtttgag ccaaccagcc agcgaccggc cgggagtgag
     5281 tccgcgcagc tccggatccg ggccagcacc gcgtccggag cctgtagccc ggtcagatcg
     5341 cagcccatca ggtccagacc gctggtgatg ggatggatgt gggcgtcctg gaatcccggc
     5401 agcagcgtcc ggccacccag cgccacccgc ctggtgcgcg acccgatcca ccgctccgcc
     5461 gccgagtcgc ttccgacgaa cgtgatccgc ccgcccttga tggctacggc ctgagcccgg
     5521 ggagcggccg agtccatcgt cagaaccgac ccatcggtga acacgaggtc ggcgtatcgg
     5581 ttgggcggcg tctggcaggc ggcgccgagc agggtcaacc cgatcgtcat cctgagcgaa
     5641 gcaaaggatc tgcttcgtgg gaggatgaga tccttcgctg cgctcaggat gagggatccg
     5701 tggccaagaa tcggtgtcat atcaatgtca tgtcagtgtg aagagagtgc ttgtagatca
     5761 gcaggtagtg ctcatgactt tttacttgag ctccagcacc ccaaaccgtt ctggattttg
     5821 gcgatcgccg agcaggtaca cccacccatc accaccggac caaaccagct ggccgaggcg
     5881 tctgacccgg tctgatgtca tttcgttgat cagcaggtcg aatcccagcc ggattcctgg
     5941 ccggagcccg gcgaggcgtg gatctgtcac tgccacgctc atcaggtacc catcatcggt
     6001 ctcgctccag gcaccggtga cctgggcctc gccctcggga ccaatgcggc gagcccttac
     6061 cgcccctgaa gggtccggca cgatcacgaa ggcagccacc tggttgtcgg gccaccgcag
     6121 gtagagctgg atcccgtcga ggtggatgtc gtccggctcg ttgtccagct ccaggggcgg
     6181 cgcgccagcc tggcggacca ccacctccgg cttccgaaca tgcactccca ggtacagccc
     6241 ttccatgttc cagttgaccc aggcgtcggc ggcaaaccga tccggatcgt agggatgctc
     6301 gctccggcgg tactggtgct cgccctccag ggtgatgggc tcctccaggt cgaacccctc
     6361 cagcgacccg tcgagggccg gccgggacca ggcgggtaga gccagggcga cggcgtccca
     6421 gctggggtga tcgcggaaca gatgtgtggg ggtggccggt gccagccgga cccctcccag
     6481 gtcgagcctt ccctccggcg tcacaacctg ggcgccaccg ctggccgtaa agccgagcga
     6541 agtgagcgat cccgttcgcc ggaccgagac tccgtcctgc ttcaccgtca gttccgttcc
     6601 atcgacaggg accagctcga tgagggtaac caggtgagtg gaggtcgagg tgatccgttg
     6661 caggtaaaag gtcgggctcg ttcgctcgcg agggagaccc ggcccagcgg cccgcagcag
     6721 ttcggccccg ccggccaggt gcagtcgaat gcgagcgtcg cccgcgccgg cctcgatcac
     6781 aaccggccct gagccgctgg gtctgaactt ctcgaccgac tcgaccgacc cgaccgactc
     6841 aaccgactcg accgactggt ctacgagctc cgccgccgtc caggtgcccg ggctggccac
     6901 tcgggtttcg ccctgcaggt gccagggcag ctcgagggtc cgcgccgtcc gggcctccag
     6961 ctcgaccaga tcgaaaacca gctcggggcc cgccaccacg gtgcgggtga cctccccggc
     7021 tcggccccgg gcccatcccc aattgccgcg gctgtcgaag gcctcacagc gggcctcgag
     7081 cggagacgct ccatcgaccg caggtgcgtt gtgggcccac acacttcgat accagaacag
     7141 cgaggggtcg acataggatc cggttcccgg atcggggagc cagtgcactc cccccgcgtg
     7201 caaggtcaag ttgagccggt cggggtgacc atgacccccg ccggccgtgc cgcactccag
     7261 gctgacatag gaaccgtttg gcctgaggag ggcgagtccc tgggattcga tgaagcaact
     7321 agcggcggcc atggctgcat cgtccgggtg gggtcgcggc tccacggcca gcagggccca
     7381 ccatgacaga tctgccgccg aacggcgtat cgggctttcc aggccgctgt cgtgcagcca
     7441 ggcgtcgtag tgatccggct tcggggcggg gacccggtag agtgcctgaa gccagccatt
     7501 gagcagggtg ccttcgccca gccacgaccg gccgatctcc cacagctcga ggtaggccgg
     7561 ctgcgccagc gagacgccga agcgggaatc cttgcgggcc gggaaggtca ggtccggcag
     7621 cgctgtcagc gaaggtgcca gaagggcccg ctcgaagtgg gtccggagct cgggatcctc
     7681 cagcaggtcg acgccgttga cgcgggccca ttggatgcca gtcatcattc cgcgcagcgc
     7741 aaagaggtgg taattctccc cttcccacca catcccttcg ccgccttcaa agccatcggc
     7801 cagcaatccc agcaacccgg tgcgcgactc gaccgaggtc tgcaccagct cctcgtcccc
     7861 gaaccaggcg gcaatcgcca ccagggcagc cgcgttccag gtctgacggt tcgagagccc
     7921 ttcattgaac tcgccgatca gggcggccgc ctcttccgcc acctgatcga tcgcttcggt
     7981 ccgctcgtcg gcgagcagac ccgcctcccg cagcaggaag gccgcggcca gccagctggt
     8041 gatccacatg ctctcgaggt aggtcgagaa gaagagatgg gtcggaccga gaacgttgtc
     8101 ctggttgggc agctcgagat acaccgcggc ctgggccgcc agcaattctc ccgcccggag
     8161 cgccgccgcc tcgtcgccta gcaggaccgc gagcgcggcc aggtcggcgg cgcgttcggc
     8221 cagccacagg tgctgggctc gggcccagtg ccggtcgtgt cgctctccgg tcaccacctg
     8281 cccgcaggtg ggacagcgat gggccgacgg gctccaggga tcgaagatga gggacgaacc
     8341 atcggtggga caaatgccgc cgtcccgcga aagcatcgct ttgacccgcg gcaccggggg
     8401 catttcccgt agcactcgac tgacccgtcc ccgcacccgg ttcgcgagtg cctgaagcag
     8461 ggcactatcc gagaccacgg cccggcggtt ttccagctgt tcggcactca gcaccgcgca
     8521 ccccttctgc attctgcatt ccggactctg cattcattcg ccccaaggcc gaatccagtc
     8581 ttcctgctcg acgcccaggc cgtcggcgat ccgattgatg tagttgaagt aggcgatcac
     8641 ctgggtcgcg tcgtggatcg cccgatcgct caatcccgcc tgacgcagcc gttccacccc
     8701 ggcggggccg gtgccagcag gatcgcggct caactgttcc gcatgatcgc acaacgccgt
     8761 gttgcccggc gagaggcccg ccccgcgcca gtcgcgcgcg atctggtcga cgaagcgatc
     8821 ggcctccccg tcgtcctcga ttccgaaatc ggcgacctcg gcacggaggt cgtgggcgtg
     8881 ggagcggatt cagtagtgac acccgttacc gcgcgacacc accaccgcca gcatctcgcg
     8941 ctgcccccgg ctgagcggcg acgcgccgta catgatggcc agatagaccg ccgtcgacgc
     9001 cttgagcacc gcggggttca cactctgcaa ccgcaggatg tgccagagcc gccccgcgcg
     9061 ctggaacgcg cggtcgtact cctccttcaa cggaccctcg gcgtcggcgg ggtcgatggt
     9121 gtgtatccag ggcatgaaca aaagtactgg gtagtgagtg ctgagtactg agtggtgtcg
     9181 ggttgcggtc gccctgctcc agttcagtac tcattactca gcactctcta tttagctgtt
     9241 tgggttccat cccatccgtt cccgcagccg cgtcacatgg gccgtgtggt gcgggccgtg
     9301 ccaggcgtag agggccagca gctgatacaa ccgctgccgg ccgctttcgg ggtggatgaa
     9361 ctcgaggtcc cactgctcct cggtcagcgc ctggagcagc accacccagc gctggtgcag
     9421 agcctcgagc aagcgcagcg aggtatcgat cggaagcgag gaatcgggca gctcggccca
     9481 gcggctttcc tcgtacggct tgatggtcgg caccgcttcg gtcagcgcca gcttgaagcg
     9541 catgtaggcg ttcatgtggc tgtcgggcac gtggtgcgcc acctgccgga cggtccagcc
     9601 gccgggccgg tagggcgtgt cgagctgccg gtcatccagg ttgctgaggg cctggcgaaa
     9661 gtcggccggg gtccgggcga taacggcgat ggccccggct cgcgctgcgg ggtccagtgc
     9721 ctggggacgc cgaaaagggc cgatggggta acgcaagtcg tccactgtga ctccgaggtc
     9781 aggtggtgcg gcgccggagc cggagccggc gccagagcag ggtataggcc accaagttaa
     9841 tcgccaccac gccgacgccg atgccgatct gcagcggcgg cgaaaggccc ggcggataga
     9901 tgagtggaat gatgtagtga tcgatgaaac cacccggata cccggtctcg cccgccagcc
     9961 gtcgaaagtg gttctccagc ggcgtgagcg gacagatcga cccgctgaac tcaatccacg
    10021 ctccccagat cgcacaggga gcctggatcc aggccagccg aggccagcgg tagaccagga
    10081 gcgctcccag aaccacgcag agaatgaacc ccccgtggac caggaccacc agatcggcca
    10141 ccaggcggta acccacagtc agcgaaggac gaagtcggag ggtaggaggg ggggaatgaa
    10201 ccggagagtg cccaatgccg aatgcccaat gcagaaggaa cgacgcctta ggc
//
LOCUS       DASWKS010000557        14523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2173664, whole genome shotgun sequence.
ACCESSION   DASWKS010000557 DASWKS010000000
VERSION     DASWKS010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2173664"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1628)
                     /locus_tag="VGA78_15980"
     CDS             complement(<1..1628)
                     /locus_tag="VGA78_15980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX9895429.1"
                     /translation="MSERTTLPILPLREVVLFPGVTAPIGAGRPATLRAIEAALATAD
                     KLVFAVSQRTNTDQVSAESLYTIGTIARIGQLQRGLGGVQLLLHGEHRGIAMHVSEHE
                     GYLQAIVRDAEELPPINAEDPAFVALYREVRTRAGELGQKSGLPEEVVQQVLSGVTDP
                     SRFADLVSGYIDITPSQRQALLETLSVEERLRRVLVHMQRQISVLDAQEEIKSQVQEE
                     LGERQREMFLREQLKQIRKELGEGDEEDEQEDLRSKIDALELPEVARREVDRELNRLG
                     RLGRESMEAQVVRNFLETVLELPWNTRTDDHLDIPKAGEILDEDHYALGDVKDRVLEF
                     LAVRQLRNQADRRAAELAVGRTDGPTAGRTDGQTAGEVTGEKGGSSDRAARPSARPSV
                     PGNEDDKAKGPILLFVGPPGVGKTSIAQSIARSLGRKYVRISLGGARDEADIRGHRRT
                     YVGAMPGRIIQGMRQAKTKNPVFLLDEVDKLGVSFQGDPSSALLEVLDPAQNSTFVDH
                     YLGIPFDLSEVLFIATANYLDRIPGPLLDRMERV"
     gene            1937..3886
                     /locus_tag="VGA78_15985"
     CDS             1937..3886
                     /locus_tag="VGA78_15985"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9895430.1"
                     /translation="MTDATDKPLALRLKEALGNDYTIEGEIGRGGMGVVFRARDERLQ
                     RRIAVKVLPPELAFQKEIKERFTREAQTAARLSHPHIVPIHDVGEGSGLVFFIMGLVE
                     GESLAARLKRRGKLPPEEARRIMKETADALSAAHALSIIHRDIKPDNILLEGTRGRVM
                     VTDFGIAKALSATSGHTLTGAGIAIGTPQFMSPEQAAGEKQIDGRSDIYSLGVVTYQM
                     LTGELPFSAPTVAGILMKQITEPAPIVHELDHLVPEELSLAVARCLEKDPESRWPTAD
                     SLRRALENRTVGAYRPTLKTAAPPRRGTSPTAGRPVSPRSTSARTAGSTRPRPLLTDP
                     ARPGRGGGALEPARPRAPGQRASRSPKFVKNERGEWVKASELEEAGVVRDTGEPVIVQ
                     KVRAQFARWAAVSLGCFALNLATGIESPWFLFPSAGMGIGLLTNYAKLWQAGYSWRDV
                     LNRPPAADAVQAPGARGKKAIPAPRQEEFGAHYAVVKQVFGDRKAILDLVQSLSPADR
                     EQLPDVVDTADALYEKACEMARTLHSMDANLNREGLGRVEERLGQLQREPESEERDRR
                     ITLLEQQKKAYQDLIGRRGMVADRLESSALAMQNMRYDLVRLKASGVGAVLNTLSQAT
                     QQARALSRDVDHAIAAASEVREALG"
     gene            3883..4686
                     /locus_tag="VGA78_15990"
     CDS             3883..4686
                     /locus_tag="VGA78_15990"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX9895431.1"
                     /translation="MNQPFQVRDYWESRLRQSYSLQGVGYQRLGRQYNKWMYRVRARV
                     FARVAQSLGLDWPRARVLDVGSGTGFYVEQWHRLGVPKVTGLDITDVAIQELTRRFPQ
                     DEFERADVGQEWPRDTRLGTRVFDAISAMDVLFHIVDDTEYAHAFRNLAALTRSGGWL
                     IWSDNFLRHGTERVTHQVSRSLEESERAVRQAGFDIIRRVPMFVLMNYPADSRSGLAR
                     LAWTALVAPASLAEPLGWVIGALLCPLDQWLTAVIQESPSTEIMICQRR"
     gene            4841..5314
                     /locus_tag="VGA78_15995"
     CDS             4841..5314
                     /locus_tag="VGA78_15995"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family protein"
                     /protein_id="HEX9895432.1"
                     /translation="MQRSRTATGDSRSQHGFTLTEMVMAVAVLGILAAVLLPKMTAVL
                     QRGGTGQAASVVASDLEQALSLAARQRKPIRVTCDCGAGRYAITDRATGTVLFQRLLA
                     GADGQMALSTLAFSTNPIDIFPNGMTSAALTVTVSSSAVSRQVTMSTGGFVRVVR"
     gene            5311..5706
                     /locus_tag="VGA78_16000"
     CDS             5311..5706
                     /locus_tag="VGA78_16000"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9895433.1"
                     /translation="MKPQSPECGFTLIEVMVAMVLLAVALLGLAPLTLQVGHLSNAAT
                     VSAQLAGALSGEASRLEATDFDDLTAGTTCTDYSAADFPRTHCVIVSDVDEMTKRVTV
                     IVTALNGGPADTTVIQRSNVGNNNPLYQP"
     gene            5703..6548
                     /locus_tag="VGA78_16005"
     CDS             5703..6548
                     /locus_tag="VGA78_16005"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX9895434.1"
                     /translation="MRPSRSRAGFTLVELLIGMVVAAVVGAALVRFLMSDMQFQEDRE
                     AWRTARQAARAGVTVLTSDLRMVETGGGIETADASGQDLTIRVPYAMGVLCATDGATS
                     TVALLPADSLMFTQPGHSGFAWRDENSGSYTYVSAGTVSGGSAGPCTIAGIAVVSGGQ
                     VVSLGGTVPSGLVKGTVFLLYRRIRYEIKASVTLSGQTALWRTQLATGASEELAAPFN
                     PGSRFRFFVDGGTTAQDAVPSPLADIIGLELVFEGRSDRTPRKAAGPKVVPFSTAIFF
                     QNQSS"
     gene            6559..7641
                     /locus_tag="VGA78_16010"
     CDS             6559..7641
                     /locus_tag="VGA78_16010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895435.1"
                     /translation="MPTPRNERGATLPMAIVTIVLLSIGAIAGLNRLQAERRTTGNQA
                     AEVDAFAMAEAALGRYITATTAPPPASLDTIITGLPGGSAAVSVRQLRAAASGVNALY
                     IIRSTATHTGGVRYDTRTPPAQRIVAQFAVWQPGSMRVGAAWTSVTGLDKNGGSGTLS
                     GTDQCGAAPAVAGVEVPTLAADGGPGYDQDGGAFVPSGLPAVSYPSANPAGFAPLIPI
                     DWDAIVNHGALEPDYILSGTLGWPTSWSDWPTIYVTGDVSLGSAQTGQGLLLIRGNAA
                     MNGSFSWNGVILVGGALTSDGNQTIQGAIISGLNVQLGETVAISDVGNGSKTVRYNSC
                     NVSAALDHLGALLPLPNAWVDNWPGW"
     gene            7818..10580
                     /locus_tag="VGA78_16015"
     CDS             7818..10580
                     /locus_tag="VGA78_16015"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9895436.1"
                     /translation="MSRRVLRWVLVLLWFALPTMLAGQAGVIQGRVTDSAGTALGAAL
                     ISVDGTGLRTSSDARGNYTIRGVPAGTRTVRARQIGYIPAVAQVAVTPGVTTTRDFQL
                     GRAAVLLAPVDVIVGTRAQHSAADELAVPVDVFGTEVIARVATTETNQVLQELAPSVN
                     FPRQSVSDASDIVRPFTMRGLSPDHTLVLVNGIRRHRTALVHIYNAGMGAGSSGIDLN
                     TIPTSALERLEVLRDGAAAQYGSDAIAGVVNVVLKDGEFAPFINTQLGRHMTADYSDD
                     GELFSGNGGVGLRLGRGTLGLFAEYRNRRETNRAGADNTDQIVPGDADEVDADGKVIT
                     KNNPVEQPNHHWGDGIARDLLTMANLRLPLGTGPTELYAFGGYSDRFGTGNGYRRVGL
                     DARNWPNIYPLGYLPQFEGKVTDWSAATGLRGLAGAWSWDAGLSYGYNNFDYDLTNTM
                     NVSLGPCLDAPCAPGLDGVPGTGDDPGIPNQTEIYAGSLRLNELTANVNLARSVSLGS
                     RPVNLALGGQFRRESYEIVAGEPASYIQGYHPDRFGDLAPAGSQVFPGFAPEFAGSND
                     RTNVGLYADLESELGRGFLVNLAGRFESYGDFGERLTGKLAFRWQPSQRWTFRAAGST
                     GFRAPALSQSFYASIVANFSRDEVTGDLVPYEVGIFPVEHQASQALGATPLKDETSVN
                     LSGGFAVSPSEAFTITADLFYIKLNDRILLTNELSGDDVEAILAAAGVDARAARYFTN
                     ALDTETRGMDVTATVRRQLASAQQLDVTGYLNFTRNRIVRIRVPPEILATDATFFDPF
                     LEGGTVAIERERPEWRAGLSGLLTSARFDASARASYFGSFQSALFGYAESTLQKFGGK
                     VLVDLEAGYRVVPSIRVALGARNLLDTYPDRLSVDNGFGLFLHPPGSPFGYNGRFVYA
                     RLEWMR"
     gene            11015..11521
                     /locus_tag="VGA78_16020"
     CDS             11015..11521
                     /locus_tag="VGA78_16020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895437.1"
                     /translation="MTKWLQRSRGAIGIGLTWAAGWAPIGAITGWVTGMVLGFPLGVV
                     TANYAVMFGVLGFIGGTIFSTVLSLAEGRRSFNQLSLPRFVAWGGLGGLLLGGLAVTA
                     GLLGAGLTMLGAVITGASTLLGAGSAAGTLVIARAAHSQVLLQEREDVAPARLTGDKA
                     RQLPGNVE"
     gene            11678..12445
                     /gene="map"
                     /locus_tag="VGA78_16025"
     CDS             11678..12445
                     /gene="map"
                     /locus_tag="VGA78_16025"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX9895438.1"
                     /translation="MTISNRSDLDGMQRVGRLVGEAHAYLATQVSPGISTAELDERGA
                     RFLRARGARSAPQLTYGFPGFNLISINDEIVHGVPGHRRLAPGDLVKIDITAELDGFV
                     ADAARTIALPAAPPVARRLARCARRAFTAALAVVCPGRPLRSLGCAVERTAYRAGFAV
                     LRELMGHGVGRTIHELPTVPNFDDPSAQGVLHEGLVLAVEPLLASRPAVVVEDPDGWT
                     LRTHNGALAAHHENTIVILQGRPVILTGWSIQRRPPN"
     gene            12948..13235
                     /locus_tag="VGA78_16030"
     CDS             12948..13235
                     /locus_tag="VGA78_16030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895439.1"
                     /translation="MAADSQAALVNGLIAAAPVAALSLSDRERALVAYADKLTQAPAS
                     IRAGDIEALRSHGLPDLAIHDACAIVAYFAFVNRIADGLGVELEDKPSAGV"
     gene            complement(13266..14483)
                     /locus_tag="VGA78_16035"
     CDS             complement(13266..14483)
                     /locus_tag="VGA78_16035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HEX9895440.1"
                     /translation="MDIKTLRRKYRAVAPGLTERSRRLWAASEAVALGPGGIGLVARA
                     TGISRPTISRGMREVESGAHQRLPPERTRRAGGGRKRAAEKDATLVGDLEALVEPTTS
                     GDPDSPLRWTSKSVRHLADELHALGHAVSHQLVAKLLRTAGYSLQANRKTREGPQHRD
                     RDAQFQYLTEQVRRFQRQHQPAISVDTKKKELVGDFKNAGREWAPKGQAEPVRVHDFL
                     IPAQGKAIPYGGYDLSRDEGWVSVGIDHDTASFAVQAIRRWWRVLGRAAYPRATRLLI
                     TADAGGSNGPRVRWWKWELQQFANRTGLTITVCHFPPGTSKWNKIEHRLFSHIAMNWR
                     GKPLVSLAAIVSLIGATRTTAGLRVRSELDHGRYPMGVAPTQDQMARLTLRPHAFHGD
                     WNYTIRPHGRQLT"
BASE COUNT         2362 a         4824 c         4876 g         2461 t
ORIGIN      
        1 tccacacgct ccatgcggtc gagcagcggg cccgggatgc ggtcgaggta gttcgcggtc
       61 gcgatgaaga ggacctcgga caggtcgaac ggaatcccga ggtagtggtc gacgaaggtc
      121 gagttctgcg ccggatccag cacctcgagc agcgccgagc tcgggtcgcc ctggaacgag
      181 acacccagct tgtcgacctc gtcgagcagg aagaccgggt tcttcgtctt ggcttgccgc
      241 atcccttgga tgatgcggcc gggcatcgcg cccacgtatg tgcgacggtg gccgcggatg
      301 tcggcctcgt cacgcgcgcc tccaagcgag atgcgcacgt acttgcgacc gagcgagcga
      361 gcgatcgact gagcgatcga cgtcttgccg acgccgggcg gaccgacgaa gaggaggatg
      421 ggacccttcg ccttgtcgtc ctcgtttccc gggacggatg gacgggcgga cggccgggcg
      481 gcccggtcgg acgaaccacc cttttcccct gtgacttcac cggccgtctg tccgtctgtc
      541 cgcccggccg ttggtccgtc agtccgcccg accgccaact cggccgcccg ccggtccgcc
      601 tggttacgca actggcgcac ggccaggaac tcgagcaccc ggtccttcac gtcgcccagg
      661 gcgtagtgat cctcatccag gatctcgccc gccttgggga tatcgaggtg gtcgtcggtc
      721 cgggtgttcc agggcagctc gaggacagtc tcgaggaagt tccggaccac ctgagcctcc
      781 atggattccc ggcccagccg acccagccgg ttgagctcgc ggtccacctc gcggcgagcg
      841 acctcgggca gctcgagcgc gtcgatcttg gaccgcagat cttcctgttc gtcctcttcg
      901 tccccttcgc cgagctcctt gcggatttgc ttgagctgct cccgcaggaa catctcccgc
      961 tgccgctcgc ccagctcttc ctggacctgc gacttgatct cctcctgggc atcgagcacc
     1021 gagatctggc gctgcatgtg caccaggacc cggcggagcc gttcttccac cgatagcgtc
     1081 tcgagcaggg cctggcgctg ggacggggtg atgtcgatgt aacccgacac cagatcggcg
     1141 aagcggctgg ggtcggtcac cccggacagc acctgctgca ccacctcttc cggcagcccc
     1201 gacttctgcc ccaactcccc ggcccgggtc cggacttcac ggtagagcgc cacgaacgcc
     1261 ggatcctcgg cgttgatcgg cggcagctcc tcggcatcgc ggacgatggc ctggaggtag
     1321 ccttcgtgct cgctcacgtg catggcgatg ccgcggtgct cgccgtgcag cagcaactgc
     1381 accccgccca ggccgcgctg cagctggccg atccgggcga tggttccaat ggtgtatagc
     1441 gactccgcgc tgacctggtc ggtgttggtc cgttgggaaa ccgcgaagac gagtttgtcc
     1501 gcggtggcca gcgccgcttc gatcgcgcgc aacgtggccg gacggccggc cccgatcggc
     1561 gcagtgaccc ccggaaacag caccacttcg cgcaggggaa gaatcggaag tgtggttcgt
     1621 tcgctcatcg tacctctctg gggtcccggc gcccatgccg atgcggcacg gcaccatccc
     1681 ggaccaaccg tggggacgat tcaagggcat cggccgtgcc ataccggcca ccgctgcatt
     1741 ccccttggaa gcatacgcac ttgcgtggct gaatggttcc cccggcgggg tcgaccagcc
     1801 tcgacggccg gttcctgctg ccaatttgac cgggcagcgc ctcgcgaacc agctgacgtt
     1861 gccccgaggg cttcaatgca gcagattttc gggcttgggt gcgggtttgc gcccagcttc
     1921 tcttaccgaa gacgcgatga ccgacgccac cgacaagccg ctcgccctac gcctcaaaga
     1981 ggctctgggc aacgactaca cgatcgaggg agaaatcggt cgggggggaa tgggcgtggt
     2041 ctttcgggct cgcgacgagc ggctgcagcg ccgcatcgcc gtgaaggtgc tgccacccga
     2101 attggccttc cagaaggaga tcaaggagcg tttcacccgg gaagcgcaga cggcagctcg
     2161 cctatcgcat ccgcacatcg tgcccatcca cgacgtgggt gagggatccg ggctggtgtt
     2221 cttcatcatg gggctggtcg agggtgaatc gctggccgcc agactcaagc ggcgcggcaa
     2281 gctgccgccc gaagaagccc ggcggatcat gaaggagacc gcggacgcgc tgagcgccgc
     2341 ccatgcgctc tcgatcatcc accgcgacat caagccggac aacatcctgc tggaagggac
     2401 ccggggccgg gtgatggtca ccgacttcgg gatcgccaag gcgctgtccg cgaccagcgg
     2461 tcacaccctc accggggccg gcatcgccat cgggacgccc cagttcatga gcccggaaca
     2521 ggccgcggga gagaaacaga tcgacggccg atccgacatc tacagtctgg gggtcgtgac
     2581 ctaccagatg ctgaccggcg agctgccgtt cagcgcgccg accgtcgcgg gaatcctgat
     2641 gaagcagatc acggagcccg cgcctatcgt gcacgagctg gatcacctgg tgcccgagga
     2701 gttgtcgctg gcagtggccc gctgtctcga aaaggatccc gaaagccggt ggcccacggc
     2761 agactcactc cgtcgcgccc tggagaaccg gaccgtcggc gcctatcggc ccaccctcaa
     2821 gactgcggcg ccgccccgcc gggggacttc ccccaccgcg ggccgaccgg tgtcgcctcg
     2881 ctccacctcc gcccgaaccg cgggatcgac ccggccccgt ccactgctca ccgatcccgc
     2941 ccgtcccggt cgggggggcg gcgcgcttga gccggcgcgc ccccgggctc cgggccagcg
     3001 ggccagtcga tcgcccaagt tcgtcaagaa cgagcgaggc gagtgggtca aggcatcgga
     3061 gctcgaggaa gccggtgtgg tgcgcgatac cggcgagccg gtgatcgtgc agaaggtgcg
     3121 agcccagttc gcccgttggg cagcggtctc gttgggttgc ttcgccctga acctggccac
     3181 cgggatcgaa agcccctggt ttctcttccc gtccgccggc atgggaatcg ggctgctcac
     3241 caactacgcc aagctctggc aggccgggta cagctggcgc gacgtgctca accggccgcc
     3301 ggcggcggat gcggtgcagg cgcccggggc caggggcaag aaggccattc cggcgccgag
     3361 acaggaggag tttggagccc actacgccgt ggtgaaacag gttttcggcg accgcaaggc
     3421 catcctggat ctggtgcaat cgctttcgcc ggccgaccgg gagcagttgc ccgatgtggt
     3481 cgacacggcc gacgcgctgt acgaaaaggc ttgcgagatg gcccgcaccc tccactccat
     3541 ggacgccaat ctcaatcgag aggggctggg gcgggtcgag gaacggctgg gccagctgca
     3601 gcgggagccg gaatcggagg aacgggaccg gcgcatcacg ctgttggaac agcagaagaa
     3661 ggcctatcag gacctcatcg ggcggcgcgg catggtcgcc gaccggctgg agtcgagtgc
     3721 cctcgccatg cagaacatgc ggtacgatct ggttcgtctc aaagcgtccg gggtcggggc
     3781 tgtcctcaac actctgtcgc aggccaccca gcaggcccgc gcgctctcgc gcgacgtcga
     3841 tcacgccatt gccgccgcca gcgaggtccg cgaggccttg ggttgaacca accgttccag
     3901 gtccgggact actgggagtc ccggctgcgg cagtcgtatt ccctccaggg cgtcggttat
     3961 cagcgactcg gccggcaata caacaaatgg atgtatcggg tgcgggcccg ggtgttcgcc
     4021 cgggtggcgc agtcgctggg tctcgactgg ccccgcgccc gggtgctcga cgtgggctcc
     4081 ggcaccgggt tctacgttga gcaatggcat cggctgggcg tgccgaaggt gaccggcctg
     4141 gacatcaccg acgtcgcgat ccaggagctg acgcgccgct tccctcagga cgaattcgag
     4201 cgcgccgatg tcggccagga gtggcctcgc gacacccggc tcgggactcg ggtcttcgac
     4261 gccatctcgg ccatggacgt cctcttccac atagtggacg acacggagta cgctcacgcc
     4321 ttccgaaacc tggcggcgct gacccgatcc ggcggctggc tgatctggtc ggacaacttc
     4381 ctccgccacg ggaccgaacg ggtgacccat caggtgagcc gttccctgga ggagagtgag
     4441 cgggcggtgc ggcaggccgg gttcgacatc atccgccggg tcccgatgtt tgtgctgatg
     4501 aactacccgg ccgacagtcg gtcagggttg gcacggttgg cgtggaccgc gctggtcgca
     4561 ccggccagct tagccgagcc gctcggttgg gtgataggtg ccctgctatg tccgctggac
     4621 caatggctca ccgcggtgat tcaggaaagc ccttccacgg aaatcatgat ctgtcaacgt
     4681 cgttgacaca cctcaccgaa cgcctgccgc gcctccgccg caccaaacgg tcaacacaat
     4741 acgaagtacg actcaccatc gtgttgttta tcaatgagtt agaatggggc acaccgattg
     4801 cattgacggt tgtcacaggc agtcaactcg gggaattcga atgcaaagaa gtcgtacagc
     4861 aaccggtgat agccgatctc agcacgggtt caccctgacc gagatggtca tggcggtcgc
     4921 ggtgctgggc atcctggccg cggtgctgct tcccaagatg accgccgtgc tgcagcgggg
     4981 cggcaccggc caggcggcca gcgtcgtcgc cagcgatttg gagcaggcgt tgtccctggc
     5041 ggcgcgtcag agaaagccga tccgggtgac ctgcgactgc ggcgccggca ggtacgccat
     5101 taccgaccgc gccaccggga cagtgctgtt ccagcggctc ctggccggcg ccgacgggca
     5161 aatggccctg agcaccctcg ccttctcaac caacccgatc gacatcttcc ccaacggcat
     5221 gaccagcgcc gccctgaccg tgaccgtgtc gtcctcggct gtatcccggc aggtcacgat
     5281 gtcgaccggc gggttcgtga gggtggtgcg atgaaacccc aatcgcctga atgcggcttt
     5341 actctgatcg aagtgatggt cgccatggtg ctgctggccg tcgccctcct cggactggcc
     5401 ccgctgaccc tgcaagtggg gcacctgtcg aacgcggcga cggtgtcggc ccaactggcc
     5461 ggcgcgttgt cgggtgaggc gtcgcgcctg gaagccaccg acttcgatga cctgaccgcc
     5521 gggaccacct gcaccgacta ctcggccgcg gatttcccgc gcacccactg tgtaatcgtg
     5581 agcgacgtcg acgagatgac caagcgagtc acggtaatcg tcacagcgct caacggcggt
     5641 ccggcggaca cgacggtgat acagcggagc aacgtcggca acaacaaccc gttgtaccag
     5701 ccatgaggcc gtctcgcagc cgggccggct ttacgctggt cgagcttctc atcggcatgg
     5761 tggtcgccgc ggtggtggga gcggcgctgg tgcgattcct gatgtccgac atgcagttcc
     5821 aggaggaccg ggaagcctgg cgcaccgcgc gccaggcggc ccgagcggga gtgacggtgc
     5881 tgacctcgga cctgcgcatg gtcgagaccg ggggcgggat cgagaccgcc gacgcgagcg
     5941 gacaggacct caccatccgg gtgccgtacg ccatgggtgt attgtgcgcc accgatggtg
     6001 cgaccagcac ggtggccctg ttgcccgccg actcgctcat gttcacgcag cccggccact
     6061 ccgggttcgc ctggcgggat gagaactcgg gtagctacac ctacgtctcc gcgggcacgg
     6121 tcagcggcgg atcggccggt ccctgcacca tcgccgggat agcggtagtg tcggggggtc
     6181 aggtcgtatc gctgggcggc acggtgccgt cgggcctggt caagggaacg gtgttcctgc
     6241 tctatcgccg gattcgttac gagatcaagg cgtcggtcac tctgtcgggc cagaccgcac
     6301 tctggcgcac tcagttggcc accggcgcct cggaagagct ggctgcgccg ttcaatcccg
     6361 ggtcgcggtt ccgcttcttc gtggacggcg gtaccaccgc ccaggatgcg gtcccgtctc
     6421 ccctggccga tatcatcgga ttggagctgg tgtttgaagg acggagcgac cgcaccccgc
     6481 ggaaggccgc cggaccgaag gtcgtgccgt tcagcaccgc gatcttcttc cagaatcagt
     6541 cgagttaggg aggacgtaat gccaactccg cgcaatgaac gcggcgcgac acttccaatg
     6601 gccatcgtca cgatcgtgct gctttcgatc ggagcgatcg cgggtctcaa ccggctgcag
     6661 gccgagcgcc ggaccacggg aaatcaggcc gcggaggtgg acgcgtttgc gatggccgag
     6721 gcggcgctgg gtcgctacat cacggccacc acggccccac cccccgcctc gctcgacacc
     6781 atcatcactg gcttgccggg aggctcggcg gccgtctcgg tccggcagtt gcgcgcggcc
     6841 gcgagcgggg tcaacgcgct ctacatcatc cgctcgaccg ccacccatac cggcggcgtg
     6901 cggtacgaca cccgcacccc accggcccag cggatcgtgg cgcagttcgc cgtctggcag
     6961 ccggggagca tgcgagtcgg tgcggcgtgg accagcgtca ccggactgga caagaatggt
     7021 gggtcaggca cgctgagcgg gaccgaccag tgcggcgcgg ctcccgcggt ggcgggtgtg
     7081 gaggtgccga ccctcgcggc ggacggcggc ccgggctacg accaggacgg cggcgcgttc
     7141 gtgccttcgg ggttgccggc agtctcctat cccagcgcca atccggcggg gttcgcgccc
     7201 ctcattccga tcgactggga cgccatcgtc aatcacggcg cgctggagcc ggactatatc
     7261 ctgagtggca cgttggggtg gcccacgagc tggagcgatt ggcccaccat ctacgtgact
     7321 ggcgacgtca gcctgggctc ggcccagacc ggccaggggc tgctgctgat tcgcggcaac
     7381 gccgcgatga acggcagctt ctcctggaat ggtgtcatcc tggtcggcgg tgccttgacc
     7441 agcgacggta accagaccat ccagggcgca atcatctccg ggctcaacgt gcagctgggc
     7501 gagacggtgg cgatcagcga cgtgggcaat ggtagcaaga cggtgcgtta caatagctgc
     7561 aacgtctccg ccgcgctgga ccacctgggc gccttgcttc cgctgcccaa cgcctgggtc
     7621 gacaactggc ctggctggta gtggtgcagc aggtcttggc ccaaccccgc tcgcggagat
     7681 atcgtcctcc ggcccgttga acctggccct gcgccggctg ggcaaggccg acgagcaccg
     7741 aacggcttga cacatcgctg gtcgtaccgt aactagggcc ccaaccccgc tcgagctcat
     7801 ctcacagggg agggtccatg tcgcgccgcg tgctacggtg ggttctcgtt ctcctctggt
     7861 ttgctctccc gacaatgctg gctggccagg caggcgtcat tcaaggtcga gtgacggaca
     7921 gcgcgggaac cgcgctgggc gcggcgctga tctcggtgga cgggaccggg ctccgaacca
     7981 gctccgatgc ccgcggcaac tacaccatcc ggggagtgcc ggccggcact cgcaccgtcc
     8041 gagcccgcca gatcggatat atcccggcgg tggcccaggt cgccgtcaca cccggtgtga
     8101 ccaccacccg ggacttccag ctgggccgcg cggcggttct gctcgcgccg gtcgatgtaa
     8161 tcgtcggcac ccgggctcag cacagcgccg ccgatgagct ggccgttcca gtggacgttt
     8221 tcggcaccga ggtcatcgcg cgggtggcca ctaccgaaac caaccaggtg ctgcaggagc
     8281 tggcgccatc ggtcaacttc ccccgacaga gcgtatccga cgcgagcgac atcgtccggc
     8341 cgttcaccat gcggggactc agtcccgacc atactctggt gctggtcaac ggcatccggc
     8401 gtcatcggac tgcgctggtc catatctaca acgccgggat gggcgccggg tcgagcggga
     8461 tcgacctgaa caccattccg accagcgcgc tggagcggct ggaggtgctg cgcgatgggg
     8521 ccgcggccca gtacgggtcc gacgcgattg ccggggtcgt gaacgtggtg ctcaaggacg
     8581 gcgagttcgc tcccttcatc aatactcagc tcggccgtca catgaccgcc gactacagcg
     8641 acgacgggga gctcttttcc ggcaacggcg gcgtcggcct gcggctgggg cggggaacgc
     8701 tcggcctctt cgccgagtac cgcaaccggc gcgagaccaa tcgggccggg gccgacaata
     8761 ccgaccagat cgtcccgggc gacgcggatg aagtggatgc tgacggcaag gtcatcacca
     8821 agaacaaccc ggtggagcag cccaatcacc attggggcga cgggatcgcc cgcgacctgc
     8881 tgaccatggc caacctccgg ctgccgttgg gaaccggccc gaccgagctc tacgccttcg
     8941 gcggctacag cgaccggttc ggcaccggga atggataccg gcgggtgggt ctggacgccc
     9001 gcaactggcc caacatctac cccctgggct acctgcccca attcgaaggc aaggtgaccg
     9061 actggtcggc cgccaccggc ctgcggggcc tggcgggcgc ctggtcctgg gatgcggggc
     9121 tctcctacgg ctacaacaac ttcgattacg acctcaccaa cacgatgaac gtgtcgctgg
     9181 ggccctgcct cgatgcgccg tgcgcaccgg ggttggatgg cgtgccgggc acgggagacg
     9241 atccggggat ccccaaccag accgagatct atgccggctc gcttcggctc aatgagctga
     9301 ccgcgaacgt gaacctcgcc cgatcggtga gcctcgggag ccggccggtg aacctcgcgc
     9361 tgggagggca gttccggcgt gagtcatacg agatcgtcgc cggggagccg gccagctaca
     9421 tccaggggta tcaccccgat cgtttcggcg acctggcacc ggccgggtcg caggtattcc
     9481 cgggcttcgc gcccgagttc gcggggagca acgaccgcac caatgtcggg ctctacgccg
     9541 acttggaaag cgagctgggc cgcgggtttc tggtcaacct ggcggggcgg ttcgagagct
     9601 atggtgattt cggggagcgg ctcaccggca agctggcgtt ccgttggcag cccagccagc
     9661 ggtggacctt ccgggccgcc ggcagcaccg gtttccgggc gccggcgctc tcgcagagct
     9721 tttatgccag catcgtggcg aacttctccc gcgacgaggt caccggcgac ctggtcccgt
     9781 acgaagtggg catttttccg gtggagcatc aggcgtcgca ggccctcggt gccacgccgc
     9841 tcaaggacga gacgtcggtg aatctgtcgg gcggcttcgc ggtgagtccc agcgaagcgt
     9901 tcaccattac ggccgatctc ttttacatca agctgaacga ccggatcctg ctgaccaacg
     9961 aactgtcggg tgacgacgtg gaggccattc tggccgcggc gggggtggac gcgcgggcgg
    10021 cgcgctactt caccaatgcg ctcgacaccg agacccgggg gatggacgtc accgccacgg
    10081 tgcggcgcca gctggcctcg gcccagcagt tggacgtgac ggggtatctc aacttcactc
    10141 gcaaccggat tgtccggatt cgggtgccgc ccgagattct ggcgaccgac gccacgttct
    10201 tcgatccgtt tctggagggc gggaccgtgg cgatcgagcg ggagcggccc gagtggcgcg
    10261 ccgggctgtc gggactgctc accagcgcgc ggttcgacgc cagcgcccgg gcctcgtact
    10321 tcggatcgtt ccagtcggcg ctgttcggct acgcggagag cacgctgcag aagttcggcg
    10381 gaaaggtgct ggtggatctg gaggccggct accgggtcgt gccatcgatc cgggtggcgc
    10441 tgggcgcgcg gaacctgctc gacacctatc ccgatcgcct gagcgtggac aacgggttcg
    10501 ggctgttcct gcacccgccc gggtcgccgt tcgggtacaa cggccggttt gtgtatgccc
    10561 ggctggagtg gatgcggtaa gaccggggag agtgaaccga ggttacgcgc aggggtggga
    10621 tcgcagtatg atccgcaacc agtgcattcg ccgtggtgca acgcggttcc ccgtcgagag
    10681 cggtctacat gactggcgcc gttgaatgga ttgcttgttc agagtaggaa gttaacacca
    10741 ggtcgcgacg tccgtgtggg aatacccatg atgccggacc ggagaaatgc agcgattcct
    10801 gattgacccg cggattgcgg gccagatccc gaatgagatc gttcaggtaa ggaaggttca
    10861 attcacgtta ggcatcgccc cgagtggctg cgactggatt cctgaagcga ggccccgggg
    10921 gggaccctct caattagaac agcggtagga caacgagact caaacggggg ccatcccctt
    10981 ccacagctcg ggacgaatcg tgaggagagg cccaatgacg aagtggctcc agcgaagtcg
    11041 tggcgctatc ggaataggcc tgacgtgggc ggcagggtgg gcgcctattg gtgctatcac
    11101 cggctgggtc acgggaatgg tccttgggtt cccgttgggc gtggtcaccg ccaactacgc
    11161 tgtgatgttc ggcgtgctcg gcttcatcgg tgggacgatc ttctccaccg tcctcagtct
    11221 tgccgagggc cgtcgcagct tcaaccagct gtcgctcccg cgattcgtcg cgtggggggg
    11281 attaggaggt ctccttctcg gagggcttgc cgtcactgca ggactcctcg gggctgggct
    11341 aacgatgctc ggtgcggtga tcacgggggc atcgacgctg ctaggcgccg gctccgccgc
    11401 cggcacgctg gtaattgcca gggcagcgca tagccaagtg ttgctgcagg aacgcgaaga
    11461 cgtcgcgccc gcgcgactga caggagacaa agcgcgccag ctacccggga acgtggagtg
    11521 agagtcgttc gctcctctgg aactcagccg gagcatgatg tcgtcgagag aggtgcctaa
    11581 cagcccgttg agactgacag tcggccttcg gcgcccgcag cttaacgaca gggcgttagg
    11641 tggtcccggc aggtggcatt gggcgggagg ttagcgaatg actatctcga accgcagtga
    11701 ccttgacggg atgcagcgag tgggcaggct cgtcggggag gctcacgcct acctggcaac
    11761 gcaggtgtcg cccggaatca gtaccgcgga actggatgag cggggcgcgc ggtttctgcg
    11821 ggctcgaggc gcccggtccg caccccagct cacctatggg tttcccgggt tcaacctcat
    11881 cagtatcaac gacgaaatcg ttcacggggt gccgggtcat cgtcgtctgg cccctggcga
    11941 cctggtgaag attgacatca ccgccgagct ggatgggttt gtggccgacg ccgcgcggac
    12001 gatcgcctta ccggccgcgc ccccagttgc ccgccgtctg gcccgatgcg cccgccgagc
    12061 gtttacggcg gccttggcgg tggtctgccc agggcgaccg cttcggagcc tcgggtgcgc
    12121 tgtggagcgg acggcgtacc gggctgggtt tgccgtgctt cgcgagctga tgggccatgg
    12181 ggtggggcgc acgatccacg aactgccgac ggtgccgaac ttcgacgatc caagtgcgca
    12241 gggagttctt cacgaggggc tcgtgctcgc ggtcgagccc ctgctggcca gtcggccggc
    12301 agtagtggtc gaggatccgg atggttggac gctgcgcacg cacaatgggg cgctcgcggc
    12361 acaccatgag aatacgatcg tcatccttca ggggaggccg gtcatcctga ccgggtggtc
    12421 gatccagcgt aggccaccta actaactagc caatggtgct gacggctcct tgccaggacg
    12481 tcaggcggcc ttacgtgacc taccggccgg ccacctcgct cttcttcagg aagggccgcc
    12541 aaatgcttgg ggttatcatc aatcgcagcg gtggcacgtt caccctggtg ggttcctgac
    12601 ccggtttgta ccggttgcgg tctagcaagg cgatagaccg cgaccgactt tgaccgctcg
    12661 attggaggga gggaacgaag gtgggattca tccgatacgt tccctccggc cagctcgcgc
    12721 ccggcgagcg cgttgcggat ccggatcaca tcatccagat ccactctgtc cacccggcgg
    12781 tcatgcgaca gcactacgag ctttatcgtg aactcatgca tcgacccggg ccactcaccc
    12841 ggcgagagcg agagattctc gcggtccgcg tttctggact caatcactgt ccatattgaa
    12901 tccaccacca cggagcgggc ctccgtcgca tcctctcggc cgagggaatg gccgccgact
    12961 cccaagccgc actcgtcaac ggcttgattg ccgccgcgcc cgtcgctgcg ctctcgcttt
    13021 ctgaccggga acgggctctg gtggcgtacg ccgacaaact cacccaggct ccggcttcta
    13081 tccgggcggg ggatatcgaa gccctgcgaa gccacggcct ccccgacctt gccatacacg
    13141 acgcctgtgc catcgtcgcc tacttcgcct tcgtcaatcg tatcgctgac gggctgggtg
    13201 tggagcttga ggacaagcca tcggcgggcg tctagctagc ttagggctcg taacaaaata
    13261 agtgattaag ttagctgccg cccgtgcgga cgaatcgtgt agttccagtc gccgtgaaat
    13321 gcgtgggggc ggagcgtgag gcgagccatt tggtcctggg tgggggccac ccccatcggg
    13381 tagcggccgt gatcgagctc ggaacggacg cggagccccg ccgtggtgcg ggtggcgcca
    13441 atcaggctga cgatcgccgc cagactcacc agcggcttgc cgcgccagtt catggcgatg
    13501 tgcgagaaca gccggtgctc gatcttgttc cacttgctgg tgccgggagg aaagtgacac
    13561 accgtgatgg tgagtccggt ccggttggcg aactgctgca gctcccattt ccaccagcgc
    13621 acccgggggc cattgctgcc gcccgcgtcg gccgtgatca agagccgggt cgcccgcggg
    13681 taggccgccc ggcccagcac ccgccaccag cggcggatcg cctgcaccgc gaagctggcc
    13741 gtatcgtgat cgatcccgac actcacccat ccctcgtcgc ggctcaagtc gtagcccccg
    13801 tagggaatcg ccttcccctg ggccgggatc aggaagtcgt gcacccgcac cggctccgcc
    13861 tgccccttcg gggcccactc ccgccccgcg ttcttgaagt cgccgaccag ctccttcttc
    13921 ttcgtgtcca cggagatggc cggttggtgc tgccgctgga agcgccgcac ctgctcggtg
    13981 aggtactgga actgcgcgtc ccgatcgcgg tgctggggcc cctcgcgcgt cttgcggttg
    14041 gcctgcaggc tgtagcccgc cgtgcgcagc agcttcgcca ccagctgatg gctcacggcg
    14101 tgccccaggg cgtgcagctc gtccgccaga tgccgcacac tcttcgaggt ccagcgcagc
    14161 ggcgagtcgg gatcccccga cgtcgtcggc tcgaccaacg cctccagatc ccccaccagc
    14221 gtcgcgtcct tctccgccgc ccgtttccgt cccccgcccg cgcgacgcgt ccgctccggc
    14281 ggcagccgct ggtgcgcgcc cgattccacc tcgcgcatcc cgcggctgat cgtggggcgg
    14341 gagatccccg tcgcgcgtgc caccaaccca atgcccccgg ggcccagcgc caccgcctcc
    14401 gacgcggccc acagccgcct cgagcgctcc gtcaaccccg gcgctacggc gcggtacttc
    14461 ctgcgcagcg tcttgatgtc cacggaccac taagatacag ccgcccagac tcgatatcaa
    14521 cca
//
LOCUS       DASWKS010000558         1794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1801822, whole genome shotgun sequence.
ACCESSION   DASWKS010000558 DASWKS010000000
VERSION     DASWKS010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801822"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1549)
                     /locus_tag="VGA78_16040"
     CDS             complement(<1..1549)
                     /locus_tag="VGA78_16040"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX9895441.1"
                     /translation="MRTSWSWSTRLSATAILLLLAAAGPLLAQQGTISGRVTDDATQQ
                     PLGGARVQLTGTSLFALSNAQGTYTIRGVAPGTHQVRIILLGFASIQRSVTVPAGGTA
                     TVDWAIHGVPFTLEEIVTTATGEQLSRELGNTVGRIEAPQLVQTAPVTNITQVLSGRV
                     AGVNVMQSNGVTGQSARIRVRGISSVSLSNEPVVYIDGVRVASESPIGAFIGGGTVSH
                     LNDLNPEEIESIEIVKGPSAATLYGTQAANGVIRVTTKRGRAGAPQWNVWLEGGLLKD
                     TYEYPSTWFSSRVGSTTLACLPYQQALGQCQIDQLHKLSLLEQPETTPFGTGNREQAG
                     ASVSGGTEAIRYFVSADWERELGLLKLADSEEEYLKAERDVDEIPVEQRRPNELRKFS
                     GRVNVSSTIGSKLDINVSSGYIDNDIRLPQTGDNFQTIIGSPILGSANPTIVAVTGGY
                     GFARPADGLGEVTWRRNDHFTNSANANWRALPWLTARGTLGLDYLAYVDEQNVFNGQG
                     CKTCGTER"
     gene            1601..>1794
                     /locus_tag="VGA78_16045"
     CDS             1601..>1794
                     /locus_tag="VGA78_16045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895442.1"
                     /translation="MHDQPGAAKGVVTKPNELTEVAGTRVRDRSGVEYSNIRCGFSYR
                     KIIKDCGLPSGVRLLTVRNGT"
BASE COUNT          295 a          563 c          612 g          324 t
ORIGIN      
        1 gccgttcggt gccgcaggtc ttgcagccct ggccgttgaa cacgttctgc tcatcgacat
       61 aggccaggta atcgagcccc agcgtgcccc gcgccgtaag ccacggcaac gcgcgccagt
      121 tggcgttggc actgttggtg aaatggtcgt tccggcgcca ggtaacctcg cccagaccat
      181 cggccggccg ggcaaacccg tatccgcccg tcaccgccac gatcgtggga ttggccgagc
      241 ccagaatggg tgagccgata atggtctgga aattgtcgcc ggtctggggc agccggatgt
      301 cgttgtcgat gtagcccgag gacacgttga tgtcgagctt gctgccgatg gtggacgaca
      361 cgttgaccct gccgctgaac ttgcgcagct cgttgggacg gcgctgctcg acgggaatct
      421 cgtcgacgtc ccgttcggcc ttgaggtact cctcctcgct gtcggccagc ttgagcagtc
      481 ccagctcgcg ttcccagtcg gccgagacga agtagcggat ggcttcggtg ccgccgctca
      541 cgctcgcgcc cgcctgctcc cgattgccgg tgccgaaggg cgtagtctcg ggttgctcca
      601 gtagcgagag cttgtggagc tggtcgatct ggcactgtcc cagggcctgc tggtagggga
      661 ggcaggcgag ggtggtggac ccgacccggc tggagaacca ggtgctgggg tattcgtagg
      721 tgtccttgag cagtccaccc tccagccaga cgttccactg cggggctccc gcccgccccc
      781 gcttggtggt cacccggatt acgccgttgg ccgcctgggt cccgtacaac gtcgccgccg
      841 acgggccttt gacgatctcg atgctctcga tctcctccgg attgagatca ttgaggtggg
      901 acaccgtccc gccgccgatg aacgcgccga tcggagactc cgaggccacc cgcaccccgt
      961 cgatgtacac cacgggctcg ttggagagtg acacgctgct gatcccgcgc actctgatac
     1021 gggcgctctg accggtcacg ccattggatt gcatgacgtt cacgccagcc acccggccgc
     1081 tcaacacctg tgtgatgttg gtgaccgggg ccgtctgaac cagttggggc gcctcgatgc
     1141 gtcccacggt gttgcccagc tcccggctga gttgttcacc agttgccgtg gtgacgatct
     1201 cctccagggt gaacgggacg ccgtgtatgg cccaatcgac ggtggccgtc ccgccggccg
     1261 gtacggtgac gctccgctga atggaggcga agccgagcag gatgatccgc acctggtggg
     1321 tcccgggggc cacgccccgg atggtgtagg taccctgcgc gttgctcagg gcgaacagcg
     1381 aagtcccggt caactggacc cgggccccgc ccagtggctg ctgggtcgcg tcatcggtga
     1441 cgcggcccga aatggtgcct tgctgggcga gcagcggacc cgcggcggcc aggaggagca
     1501 gaatggcggt agccgacagg cgggtggacc aactccagga cgtacgcatc ggacgaaacc
     1561 tccgaggaat ggagggtgat tgggacgcaa aactgtatac atgcacgacc agcccggggc
     1621 ggcgaagggg gtcgtgacca agccgaatga actgacggag gtggccggca ccagagtaag
     1681 ggaccggtcc ggggtcgagt attccaatat ccggtgcggg ttctcgtacc gcaagatcat
     1741 caaggactgt gggttgccgt ccggtgtccg cctattgaca gtgcggaatg gaac
//
LOCUS       DASWKS010000559         1660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_298001, whole genome shotgun sequence.
ACCESSION   DASWKS010000559 DASWKS010000000
VERSION     DASWKS010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298001"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="VGA78_16050"
     CDS             complement(<1..464)
                     /locus_tag="VGA78_16050"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX9895443.1"
                     /translation="MEKKKDALNYEFSVSAPAEAVFYAFSTGQGWRDWLCDQAIFQPR
                     AGGTYHLGWDTGWYVSGRVEELEKPSRVRLTWRGAEDPAASVVRIELHGHGDHTHGTV
                     EHFGFGEGEAWEGARKQAQRGWEVGLENLESIFSTGADLRITRRPMVGLMGN"
     gene            571..867
                     /gene="gatC"
                     /locus_tag="VGA78_16055"
     CDS             571..867
                     /gene="gatC"
                     /locus_tag="VGA78_16055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX9895444.1"
                     /translation="MALSAEEVRKIALLARLQLSEQELQRYAQQLSAVLDYAARLGAV
                     DTSEIPPTATVLPLTAPLRPDEVRPSLPPELMLSNAPFSEAGMFRVPRVLEEQP"
     gene            957..>1660
                     /locus_tag="VGA78_16060"
     CDS             957..>1660
                     /locus_tag="VGA78_16060"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9895445.1"
                     /translation="MAAPTDLTLLEAAGALRAGDVSSVELTQACLDRIRAVDSRIHAF
                     LTVTDELALAQARAADDWLRQNPGGPVPLVHGIPLAVKDVLCVEGAPATAGSRILEGF
                     RPPYTATSVSRLLHAGAVVVGKTNTDEFAMGSSTENSAYGVTHNPWDLDRVPGGSSGG
                     SAAAVAARFSYAALGTDTGGSIRQPAAFCGVTGLKTSYGRVSRYGLIAFGSSLDTVGP
                     IARSVADLEPVFHTMSG"
BASE COUNT          266 a          578 c          497 g          319 t
ORIGIN      
        1 tcgttgccca tgaggcccac catcggccgg cgggtgattc gcagatcggc cccggtggaa
       61 aagatcgact cgagattctc caggccgacc tcccagccgc gctgggcctg tttgcgggcg
      121 ccctcccaag cctccccttc accaaaaccg aagtgttcga ccgtgccatg agtgtgatcg
      181 ccatggccgt gcaactcgat ccggacgacg ctggcggccg ggtcctcggc tcctctccag
      241 gtcagccgca cccggctggg cttctccagt tcttctactc gaccggaaac ataccagccg
      301 gtatcccagc ccaagtgata agtccctcca gcccgcggct ggaagatggc ctggtcgcac
      361 agccagtcgc gccagccctg gccggtgctg aaggcataaa acacggcttc ggccggggcc
      421 gaaaccgaga actcgtagtt gagggcgtcc tttttctttt ccattctgtt ctccacccgc
      481 tggttgaggt cactcattct acccaacttg gatcgaggaa gttcagtcca gcggagcgag
      541 cccgagtcgc tacgctataa tatcgatgaa gtggctctct ctgctgagga agtccggaag
      601 attgcacttc tcgcccgcct ccagctgagt gagcaggagc tgcaacgcta cgcccagcag
      661 ctgtcggcgg tcctggacta cgccgcccgt ctgggagcag tcgacacgtc cgagatccct
      721 cccactgcga ccgtgcttcc gctaactgcc cccctccgcc ccgacgaagt ccgtccaagc
      781 cttcctcctg agctgatgct atccaatgca cctttttccg aggcgggcat gttccgggtt
      841 ccccgggtcc tggaagaaca gccctagtcg ccggcgaggc gtcgagtcgc cgccctcggc
      901 ggtggccatc cgggtcagga gacccggaat gatcttcccg cccggaccgc actgatatgg
      961 ctgccccgac cgatctgacc ctgctggaag ctgccggtgc cttgcgggcc ggcgacgtct
     1021 cgtctgtcga attgacccaa gcctgtttag accgcattcg ggctgtcgat tcacggatcc
     1081 acgccttcct gaccgtcacc gacgagctgg ctctggcgca agctcgggca gccgatgact
     1141 ggctgcgcca gaatccgggc ggcccggttc cgctcgtaca cggcatcccg ctcgcggtga
     1201 aagacgtgct gtgcgtcgag ggcgctcccg caaccgccgg atcgagaatc ttggaagggt
     1261 tccgcccgcc ctacaccgcc accagtgtct cgcgcctgtt gcacgccgga gcggtcgtgg
     1321 ttggcaagac caacaccgat gagtttgcga tgggttcctc gaccgagaat tcggcctacg
     1381 gggtcaccca caacccatgg gatttggatc gggtaccggg tgggtcttcc ggaggctcgg
     1441 ccgccgcggt ggccgcccgg ttcagttacg ccgccctcgg caccgacact ggcggctcca
     1501 ttcggcagcc cgccgcgttc tgcggcgtca ccggcttgaa gacctcctac ggccgggtct
     1561 ctcgctacgg tctgatcgcg ttcgggtcct cgttggacac agtggggcca atcgctcgca
     1621 gcgtggccga cctggagccg gttttccaca ccatgtccgg
//
LOCUS       DASWKS010000560         4270 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1802586, whole genome shotgun sequence.
ACCESSION   DASWKS010000560 DASWKS010000000
VERSION     DASWKS010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1802586"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VGA78_16065"
     CDS             complement(<1..764)
                     /locus_tag="VGA78_16065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895446.1"
                     /translation="MGLVGWSADLSWARGVSQTGYTDLNLAPVPSFALVAEANRPVYA
                     PAAGIEPATGATSLLASRRHPQFGQVLSVDSRLESESYQLTLAANGITRGGIVFSGAY
                     TLARSRDQASGGGFGSASMAGDPNQREWSTSDFERRHSFQTTATVPVGQSLEITSIGR
                     LGSGVPFGGGPGAGDFLERFETLIPNPARQILELRLGLRLSDDQVRRLTEVGDSTARR
                     TKELADSARAAIQRAGPSPDPFRLMGGIRPLLEQGQT"
     gene            complement(792..2009)
                     /locus_tag="VGA78_16070"
     CDS             complement(792..2009)
                     /locus_tag="VGA78_16070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895447.1"
                     /translation="MLTLLSAPEAVLLGQGVSPDSVTRFIDILSQRSLPVTLADQDNR
                     DTDNWSALTRLDWMASSNHTLTLRGDWRGTTAEPARVGAMTLPQTGGRQTSWGGGGFA
                     TLTSRFGSAIINELKGYLSARSQESNPFLALPQGRVQVASTVEEAQAVSSLTFGGNPS
                     FPTRSSATTLEVSNEVSWLTGGAALRFKLGLLYNRTSTSQDGSFNRFGTFSFNSLTDL
                     EADRPASFTRTLEPTIRDGSSSNSALYLADVWRPAAGWQVTWGGRLERSSAGGAATYD
                     PDVEQLFERRTDQLPSEIHLSPRIGFTWGPGADSDRGRPSAVTIRGGVGEFRSAFNAG
                     LFSAAQSTGTARSLESQLVCVGDAVPFPDWNAFLADPSAIPTACNGGGPSPAPTRSPT
                     LTVFDPEYGSPRS"
     gene            complement(2066..2932)
                     /locus_tag="VGA78_16075"
     CDS             complement(2066..2932)
                     /locus_tag="VGA78_16075"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9895448.1"
                     /translation="MPIRSPLVRTALLAIALMLPASPAASQVGSTTDILTGIVRDSAG
                     RPVSEAVVEAISLETQVSRATRTDARGRWVIVFPDGGGQYRLVVRFIGMVPVERLVAR
                     QADEDRLVADVTLARTTQRLQDIVVRGRPGPVVAPNAPTPGSIERVVTSEQAARLPLD
                     AGDLNALALLAPGVVAVDATDSTGAGFSVAGQRPGANNTTLDGMSFGASTVPQDGLRA
                     TRIITNTYDAARGQFSGGQIASITRSGTNQLAGSENYSLRDQFLELDGEDPEVYARGL
                     TLHQLSGGLGVP"
     gene            complement(3379..>4270)
                     /locus_tag="VGA78_16080"
     CDS             complement(3379..>4270)
                     /locus_tag="VGA78_16080"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEX9895449.1"
                     /translation="DFTREAANLRLVRTNFAGNRRVRIPAVFDDLSGPRVLVLEFMVG
                     TRIDALDPDRLHGGLRVAGVVERLVELYLQMMLEHGVFHADPHPGNLLVAPDGVLVLL
                     DFGVIIPVARDRRRHILDTAFAALRRDPAGVTDGMYALGIVEPGADRAQIERLARLLI
                     DLASGRTTTQERLDLLTHEIMDELYDWPVRLPSDLVYYGRTAALIEGIGMRYDARFNP
                     LQVAAPVLFRMRGALLASLSDSRVLDQLDLPTVIGFALGKATAVIADVGARLLQFARG
                     GLEGLERPAPKQLPRRAGAA"
BASE COUNT          711 a         1433 c         1489 g          637 t
ORIGIN      
        1 gtctgtccct gttccaacaa cggtctgatg ccgcccatca gccggaacgg atccgggctc
       61 ggtccggcgc gctggatagc cgcccgggcc gagtcggcca gctccttggt gcgccgagcg
      121 gtgctgtctc cgacctcggt gaggcgccta acctggtcgt cactcaatcg gagacccagc
      181 cgcaactcca ggatctgtct ggccggattg ggaatcaggg tctcgaagcg ttccaggaaa
      241 tcacccgcac ccggaccccc gccgaagggg accccggagc cgagccggcc gatggaggtg
      301 atctcgagac tctgacccac cgggacggtc gcggtggtct ggaaggaatg ccgccgttcg
      361 aagtcgctgg tcgaccactc ccgctggttg ggatcgcccg ccatactcgc gctgccgaac
      421 ccgccgccgc tcgcctgatc gcgcgagcga gccagggtgt aggccccgct gaagacgatg
      481 ccgccccggg tgatcccgtt ggcggccagc gtcagctggt acgactcgct ctccagccgt
      541 gagtccaccg agagcacctg cccgaactgg ggatgccggc gcgacgcgag cagactggtg
      601 gcaccggtcg caggctcgat gccggccgcc ggtgcgtaga ccggccgatt ggcctcggcc
      661 accagcgcaa agctcgggac cggcgccagg ttcaggtcgg tgtatccggt ctgcgaaact
      721 ccgcgggccc acgacagatc ggccgaccat ccgaccaggc ccatccggtg ctgcacgcct
      781 aacgaggcgc gctagctcct gggggagccg tactcgggat cgaagaccgt gagcgtggga
      841 ctccgggtcg gtgcgggcga cgggcctccg ccattgcatg ccgtcggtat cgccgacgga
      901 tcggccagga atgcgttcca atcggggaag ggaaccgcat cgcccacaca gaccagctgc
      961 gactcgagcg accgcgcggt tccggtcgat tgcgccgcgg aaaagaggcc ggcattgaag
     1021 gcgctccgga actcgcccac accgccgcga atggtgacgg ccgatgggcg gccccggtcc
     1081 gaatcggctc ccggccccca ggtgaagcca atccggggac tcaggtgaat ctccgagggc
     1141 aactggtcgg tccggcgttc gaagagctgc tcgacatccg ggtcgtacgt cgccgcgcca
     1201 ccggccgacg agcgctccag ccggccgccc cacgtgacct gccatcccgc cgccggccgc
     1261 cagacgtccg ccagatacag cgccgagttg ctgctgctgc cgtcacggat ggtcggctcg
     1321 agggtgcggg tgaagctcgc gggacggtcg gcctcgagat ccgtcaggga gttgaagctg
     1381 aaggtcccga agcggttgaa cgacccgtcc tgggacgtgc tggtccggtt gtacagcagt
     1441 ccgagcttga agcggagggc cgcgccaccg gtcagccagc tcacctcgtt gctcacttca
     1501 agggtggtgg cggagcttcg ggtggggaag gacggatttc ccccgaaggt gagcgacgag
     1561 accgcctggg cctcctccac cgtcgaggcg acctggaccc gaccctgggg aagggccaga
     1621 aacggattgc tttcctgtga gcgcgccgag aggtagccct tcagctcgtt gatgatggcg
     1681 ctgccgaacc ggctggtgag cgtggcgaac cccccgccgc cccagctggt ctggcgcccg
     1741 ccggtctggg gcagggtcat cgcccccacc cgggccggct ccgccgtcgt gccgcgccag
     1801 tctccccgca gggtcagggt gtggttcgaa ctcgccatcc agtcgagccg ggtgagcgcc
     1861 gaccagttgt cggtgtcgcg gttgtcctga tcggccagcg tgaccggcag tgaacgttgg
     1921 gacagaatgt caatgaaccg ggtcacagaa tcgggactga cgccctgacc gagcaggacc
     1981 gcttcgggcg cgctcaacag ggtcaacatg tcgtccgagc gcaggcggcc ctgcaacgag
     2041 ccgaatagga agaggcggtt ccggctcagg ggacccccag gccgccggac agctgatgca
     2101 gggtgaggcc ccgggcgtag acctcggggt cctcgccatc cagctcgagg aactggtccc
     2161 gcagcgagta gttctcgctg ccggcgagct ggttggtacc gcttcgcgtg atcgacgcga
     2221 tctggccgcc gctgaattgg ccccgggccg cgtcgtatgt attggtgatg atccgggtgg
     2281 cacgaaggcc gtcctggggg acggtcgatg ccccgaagct catcccgtcc agagtggtgt
     2341 tgttggcgcc gggacgttga ccggcgaccg agaatcccgc cccggtcgaa tcggtcgcat
     2401 cgaccgctac gacgccgggc gcgagcagcg ccagggcatt gagatcgccg gcgtcgagcg
     2461 gcaaccgcgc cgcctgttcc gaagtaacca cccgctcgat cgatcccggc gtgggcgcgt
     2521 tgggcgccac gaccggtcct ggccggcccc ggaccacgat gtcctgcagc cgctgggtgg
     2581 tccgggcgag ggtgacgtcc gccaccagcc ggtcctcgtc cgcctgacgc gccaccagcc
     2641 gctccaccgg caccatgccg atgaaccgca ccaccaggcg atactggccg ccgccatccg
     2701 ggaagacgat gacccatcgc ccgcgggcat cggtgcgagt ggcacggctc acctgggtct
     2761 cgagcgagat ggcctcgacc acggcctcgc tcaccggccg gccggcggag tcacgcacaa
     2821 tgcctgtgag aatgtcggtg gtagatccta cctgggacgc ggcgggagag gccggcagca
     2881 tcagcgcaat cgcaaggaga gcggtacgta ccagagggga gcggatgggc attagcccat
     2941 atactcccgg cggggtgggg atgttggggg aggagttccg ggttccgcgt tccgggtgcc
     3001 gggggtacgg tgcaacgtgc ggtgctgggt gccgggtgca gggtgcgctg ataggctggg
     3061 aatcaggccc gaactcggca cgcggcaccg caccgtgcac cgcacgtggc acttggaacc
     3121 cggaacgtga catgccaaga gtgccgcgag cacaaggagt gctcttggca ctcgggcgct
     3181 cccgacactc ctggttctcc atcgtcggct tacgtagcgc tgtgaccgtc aggtcggccc
     3241 gaagggtcgg gcacaatagt ggggcgctac tcatcgccag cacgacaaag ctgttgtgat
     3301 tacggtctta atgaatagca agcgatgtgc cagcggggtg gcaggtcctg agccagcgcg
     3361 taactccctg cgtcgcaatc aggcggcgcc ggcccgcctg gggagctgtt taggagctgg
     3421 tcgctccaac ccctccaatc cgccgcgggc aaactgcagc agtcgcgccc cgacatcagc
     3481 gatgaccgcc gtcgcctttc ccagcgcaaa cccgatgacg gtcggcaggt cgagctggtc
     3541 gagcactcgg ctgtcggaga gcgaggccag cagggccccc cgcatccgga agagaaccgg
     3601 ggcggccacc tggaggggat tgaagcgggc gtcgtagcgc atcccgatgc cttcgatcag
     3661 cgccgcagtg cgcccgtaat acaccaggtc gctgggcagc cgaacgggcc agtcgtacag
     3721 ctcgtccatg atctcgtggg taaggaggtc gagccgttcc tgggtggtgg tccggcccga
     3781 ggccaggtcg atcagcaatc gcgccaaccg ttcgatctgg gcccgatccg cgccgggctc
     3841 cacaatcccc agcgcataca tcccgtcggt gaccccggcc gggtcccggc gcaacgcggc
     3901 gaacgcggta tcgaggatgt gccgccgccg atcgcgagcg accgggatga tgacaccgaa
     3961 gtcgagcagc accaggacgc cgtcgggggc taccagcaga ttcccggggt ggggatcggc
     4021 gtgaaacacg ccgtgctcca gcatcatctg gaggtaaagc tcgaccagcc gctccaccac
     4081 gccggcgacg cggagtccgc catgcaaccg atcggggtcg agcgcgtcga tccgagtgcc
     4141 caccatgaac tcgagcacca gcacgcgtgg tcccgagagg tcgtcgaaga ccgccgggat
     4201 gcgaacccgg cggttcccgg cgaagttcgt ccgcaccagc cgcagattgg ccgcttcgcg
     4261 ggtgaaatcc
//
LOCUS       DASWKS010000561         2607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3265540, whole genome shotgun sequence.
ACCESSION   DASWKS010000561 DASWKS010000000
VERSION     DASWKS010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3265540"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VGA78_16085"
     CDS             <1..786
                     /locus_tag="VGA78_16085"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9895450.1"
                     /translation="EFGTFVSPRFAARASLGERWALRVAAGTGFFGPTPFVEEVEAIG
                     LARLDLSSGLRAEQAVGGSIDLGGTVGSFELNATLFGSLLEDAVDLVGSAPGRVALAN
                     SAGTTRTGGVELLARYRAGPLHLTTTYTGLAATELPPAEATRRRVPYNPSHAIGVVGI
                     WEREGRSRLGAELFFTGRQDTEDDPYRTTTPAYLIVGLLAEHRIGRFRLFLNLENLTD
                     RRQSRYDSIVRPERAPDGRWTVNLWAPAEGRVVNGGIRWIVGS"
     gene            919..1650
                     /locus_tag="VGA78_16090"
     CDS             919..1650
                     /locus_tag="VGA78_16090"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX9895451.1"
                     /translation="MARGRLTRFGIDLLCGLASLCIVVAGLALLVGSVPPPTRAAGLA
                     IAPPVQDGFQLSKLQDTLALLLRERPVAPDPLVSIMHALGPVSLLAGKFREQAESLSA
                     TLQRLASTPSVMPTQGWLSSNFSRHRFHPVLGYARPHLGIDVRAPRGTAIEAPAAGSV
                     ITASWEGGYGWTVEIDHGWDIITRYAHVSKMLVRPGQRVQRGEIIALVGQTGLADGPH
                     LHYEVRVKGLPVDPLRFVLPAVIAD"
     gene            complement(1657..2220)
                     /locus_tag="VGA78_16095"
     CDS             complement(1657..2220)
                     /locus_tag="VGA78_16095"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX9895452.1"
                     /translation="MQHARLLLAGLVVASLSGCGYNAMQRKDEAVNQAASQIKVQLQR
                     RSDLIPNLVETVKGVARQESTIYIGVAEARARLNGAIQSGDLGEMSAANQGLTGALGR
                     LFAVVEAYPELKSNQNFLALQDELTGTENRIGVARQDYNEKVNDFNAYIRTFPYNLTA
                     KMFGLSKPREYFELTSENAAEAPKVKF"
     gene            complement(2220..>2607)
                     /locus_tag="VGA78_16100"
     CDS             complement(2220..>2607)
                     /locus_tag="VGA78_16100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895453.1"
                     /translation="AALEVRLGDLQRALESELRGKLLRIRLDYGLYHAHEERLAAVVG
                     HSIGSVRVLLRSSLALAGLATPATDAELVPAIGGLIGLDSAPLERLLAHRRNPSWRCP
                     RPLFESYIGIVEQTTRFADHYHLGDH"
BASE COUNT          418 a          869 c          853 g          467 t
ORIGIN      
        1 gaatttggta ccttcgtcag cccgcggttc gccgcccgag cctcgctcgg tgagcgctgg
       61 gcgctccgag tggccgccgg caccgggttc ttcgggccga ccccgttcgt cgaggaggta
      121 gaagcgatcg gactcgcgcg gctggacctt tcgagcgggc tccgggccga gcaggcagta
      181 ggcgggtcga tcgacctggg tggaacggtc ggatccttcg aactcaacgc cacactgttc
      241 ggctcgttgc tcgaggacgc agtggacctg gttggcagcg caccgggacg ggtggcgctg
      301 gccaacagtg ccggcaccac ccgcaccggc ggcgtggaat tgttggcgcg ataccgggcc
      361 ggcccgctgc acctcaccac cacctacacc ggtctggccg ccaccgagct gccacccgcg
      421 gaggcaaccc ggcggcgcgt gccgtacaac ccgagccatg ctattggcgt ggtgggaatc
      481 tgggagcggg aaggccgcag tcgattggga gccgagctgt tcttcaccgg acgccaggac
      541 accgaggacg atccctaccg gaccacaacg ccggcctatc tgatcgtagg gctcctggcg
      601 gaacatcgca tcggccgctt ccggctgttc ctcaacctcg agaacctcac cgaccggcgg
      661 cagtcccgct atgactcgat cgtgcggccg gaacgcgccc cagacggtcg ctggaccgtc
      721 aatctttggg cccccgccga gggtcgagtt gtgaacggtg ggatccgctg gattgtggga
      781 tcgtaacctc atgtccgaca atcattactg gtgcctagca tcgggttgac acaccctcca
      841 ccgcggggga tattcccacg cccgcagtgg ggatcgggga agaattcttc gactcgactg
      901 ccaacgacga gtaatgtgat ggcgcgtggc cgactaacac ggttcggtat cgatctgctg
      961 tgcggcctcg ccagcctgtg tatcgtcgta gccggtctcg cccttctggt cggctcggtc
     1021 ccgcccccga cccgcgcagc aggtctcgcg atcgccccac cggtgcagga cgggttccag
     1081 ctctcgaagc tgcaggacac gctggcgctg ctgctgcggg agaggccggt cgcgcccgat
     1141 ccgttggtga gcatcatgca tgccctgggc ccggtgagcc tgctggcggg caagttccgc
     1201 gagcaggcgg agagtctgag cgccacgctc cagcgcctgg cctcgacccc ctcggtgatg
     1261 cctactcagg gatggctcag cagcaacttc tcacgccacc gcttccatcc ggtattgggg
     1321 tacgcccggc ctcacctggg gatcgacgtg cgggcgccgc gcggcaccgc catcgaggcg
     1381 ccggccgctg gcagcgtgat cacggcgtca tgggaaggcg gttacggctg gacggtagaa
     1441 atcgaccatg gctgggacat catcacccgg tatgcccacg tgtccaagat gctggtgagg
     1501 ccgggtcagc gggtccagcg gggtgagatt atcgcgctgg tgggacagac cgggctggcc
     1561 gatggcccgc acctgcatta cgaggtgcga gtcaagggcc ttccggtaga tccgctccga
     1621 ttcgtgctcc ccgcggtcat cgcggactga accggctcag aacttcacct tgggcgcttc
     1681 tgccgcgttc tcgctggtca gctcgaagta ctccctcggt ttgctcagcc cgaacatctt
     1741 ggccgtcagg ttgtagggga aggtccggat gtaggcgttg aagtcattga ccttttcgtt
     1801 gtaatcctgc cgcgccaccc cgatccggtt ctcggttccc gtcagttcgt cctgcagggc
     1861 gaggaaattc tggttggact tgagctcggg ataggcctcc accaccgcga acagccgtcc
     1921 cagcgcgccg gtcagcccct ggttggcggc cgacatttca cccagatcgc cgctctggat
     1981 cgcgccgttg agacgggccc gcgcctcggc cacgccgatg tagatggtcg actcctgcct
     2041 ggccactccc tttaccgtct ccaccagatt gggaatcagg tccgagcggc gttgcaactg
     2101 cactttgatc tggctggcag cctggttcac ggcctcgtct ttccgctgca tggcgttgta
     2161 gccgcagcct gacaacgagg cgacgaccag accggccagg agcaaccggg catgctgcat
     2221 cagtgatctc ccaggtgata atgatctgcg aatcgggtcg tctgttccac gatcccgatg
     2281 taggactcga acaatggccg gggacagcgc cacgaagggt tacgccggtg cgccaggagc
     2341 cgctccagcg gtgcgctgtc cagtccgatg agtccgccaa tggccggcac caattcggcg
     2401 tcagtggcgg gtgtggccag cccggccagc gccaacgagc tgcgcaacag cacccgaacc
     2461 gagccgatgc tgtggccgac taccgccgcc agccgctcct catgggcgtg atagagtccg
     2521 taatccaggc ggatccggag cagcttgccg cgcagctctg attccagcgc ccgctgcaga
     2581 tcgccgagcc gcacttccag ggcggcc
//
LOCUS       DASWKS010000562         4766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2530033, whole genome shotgun sequence.
ACCESSION   DASWKS010000562 DASWKS010000000
VERSION     DASWKS010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2530033"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VGA78_16105"
     CDS             <1..867
                     /locus_tag="VGA78_16105"
                     /inference="COORDINATES: protein motif:HMM:NF013442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895454.1"
                     /translation="ATVLIETLPAAFEMHEILWELRQHSAGLNCGRWDYIFSFIKTRR
                     HDPAAVLPDRSQVTMEQPCMRAYTQLVVQTCHRRGVHAMGGMAAQIPIRDDPAASANA
                     LAKVRADKLREVTDGHDGTWVAHPGLVALAREVFAATMTGPNQLERLREDVNVSAGDL
                     LLVPSGTRTATGLRHNIRVGIQYLESWLRGVGCVPLYHLMEDAATAEISRTQVWQWLH
                     HGATLEDGTAVTAELVRQFTDQELRVIEAEVGTERFRQGRFPEATTLFERLATATECR
                     EFLTLPAYDLLD"
     gene            895..2202
                     /gene="aceA"
                     /locus_tag="VGA78_16110"
     CDS             895..2202
                     /gene="aceA"
                     /locus_tag="VGA78_16110"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF011645.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HEX9895455.1"
                     /translation="MIDQNPFARNGRSTPADRWTGISRPYDAEAVERLRPSLRIAYSL
                     AEHGARRLWALLQSEDYINALGALSGGQAVQQVRAGLRAIYLSGWQVAADANLAGQTY
                     PDQSLYPANSVPAMVRRLNQALLRADEIERAEGQDATRDWLVPIVADAEAGFGGPLNA
                     FELMKGMIEAGAAAVHFEDQLSSEKKCGHLGGKVLVPTGQFIRTLVAARLAADVCDVP
                     TLLVARTDADSAKLLTSDIDSRDQAFLTGERTPEGFFRISGGLDMAIARALAYAPYAD
                     LLWCETSTPDLDEARQFAEAVHARFPGKLLAYNCSPSFNWKRKLDDITIARFQRELGA
                     MGYRFQFVTLAGFHALNYGMFELAEDYRDRGMAAYARLQEAEFAAESRGYTATRHQRE
                     VGTGYFDQVLQTITGGLACTTALDGSTEAAQFARQTATVQRSP"
     gene            complement(2447..2968)
                     /locus_tag="VGA78_16115"
     CDS             complement(2447..2968)
                     /locus_tag="VGA78_16115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEX9895456.1"
                     /translation="MITGHFTVALGTLGLLALVGSNPATWTAKLEGKDRSAISGTARV
                     EAPAAPAVTPDPAMPPRDTMPPPAPEPAKPMDNQLRATLSITNAPQNATLSWHVHQGK
                     CGSNGPIVGSSAAYQPVKVDAQGSGTASASVTASLQEKGEYYADVHSSQDQGAQVAAC
                     GTLEYQRTRADDL"
     gene            3285..>4766
                     /locus_tag="VGA78_16120"
     CDS             3285..>4766
                     /locus_tag="VGA78_16120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895457.1"
                     /translation="MTAPAAPGLPARFEERLPHLLARLTALLIAWLGLTVLVGWAAGW
                     DSLVRLGAGFPALSPNAALTLLGAAAALGAVDHGSRRIARFAATVVIVISSLTFLQYL
                     LNLDFGIDRLLLPTDAELPGVRYPGRMAAGSALCLMFSGTALLALSVNRHTDAIDITA
                     GVLGVTVASVGGIVLLGYLTGVLQELRHSVVAGMSLYGALGLLLLGSSIVAIAWRRDM
                     ALATLPRWSAAAIAMAGVTATALFWKALVQRDEERLDERLGYEAAVARQSVAAQIDAL
                     IKDLGRLGRRTGQLSLAAWTDDATAAVRDIDLYEAVAWIDRDDQLRAVVPWTAAAWVD
                     RLRQGERSGAVDTVRMHGYPTDPVSAELVESETLLAVRVAACGDSTCTGKLAGFINLE
                     RLFTRAIGTSDRDLCLTVSTGGRTLFARDETSCRRGTRRGYAYLAVGPLSWTLTVAPT
                     PLLLSATSSPLPIVLLCLGVVVSGLMATSLRLAQTSWQLAREAE"
BASE COUNT          715 a         1617 c         1624 g          810 t
ORIGIN      
        1 gccacggtcc tgatcgagac cctcccggcc gccttcgaga tgcacgagat cctgtgggag
       61 ctgcgccagc attccgccgg gctcaactgc gggcgttggg actacatctt cagcttcatc
      121 aagacccgcc ggcacgatcc cgcggcggtg ctgccggacc gctcccaggt gacgatggaa
      181 cagccttgca tgcgggccta tacccagctg gtggtgcaga cctgccatcg ccgcggggtc
      241 cacgccatgg ggggcatggc ggcccagatt ccgattcggg acgacccggc ggccagtgcg
      301 aacgccttgg ccaaggtgcg agccgacaag ctccgggaag tgaccgacgg ccacgacggc
      361 acctgggtgg ctcacccggg actggtagcg ctggcccgtg aggtgttcgc cgccaccatg
      421 accggtccca accagctcga gcggctgcgg gaggacgtga acgtgagcgc cggcgacctc
      481 ctcctggtac ccagcgggac tcgcaccgcc accggactca ggcacaacat ccgggtcggg
      541 atccagtacc tggagtcgtg gctgcggggc gtcgggtgtg tcccgctcta ccatctgatg
      601 gaggacgccg cgaccgcgga aatctcccgg acccaggtgt ggcaatggct ccatcatgga
      661 gccacgctgg aggatggaac ggcggtgacc gccgagctgg tgcggcagtt caccgaccag
      721 gagctgcgag tcattgaggc ggaggtggga accgagcgct ttcgccaggg acgctttccc
      781 gaggccacca cgctcttcga gcgtctggcc acggccaccg aatgccggga gttcctgacc
      841 ctcccggcgt acgatctgct cgactgaacc caggccccat catacgaggc tgcaatgatc
      901 gaccagaacc cattcgcccg taacggccgg tccactcccg ctgatcgctg gaccgggatc
      961 agccgcccct atgacgccga ggcggtcgaa cggctgcgtc cgtcgcttcg gatcgcctac
     1021 agcctcgccg agcacggggc gcgccggctc tgggcgttgt tgcagagcga ggactatatc
     1081 aacgcgctgg gcgctttgtc gggcggccag gcggtgcagc aggtccgggc cgggcttcgg
     1141 gcgatctacc tctccggctg gcaggtggcg gccgacgcca acctggcggg acagacctat
     1201 cccgaccaga gcctctaccc ggccaacagc gtgcccgcga tggtgcggcg gctgaaccag
     1261 gcgttgctac gcgccgacga gatcgagcgg gccgagggcc aggacgccac ccgcgactgg
     1321 ctggtgccga tcgtggccga tgcggaagcc ggtttcggtg gcccgctcaa cgcgttcgag
     1381 ctgatgaagg ggatgatcga agccggcgcc gcggcggtgc acttcgagga ccagctctcg
     1441 agtgaaaaga agtgcggcca tctgggcggc aaggtgctgg tccccaccgg gcagttcatc
     1501 cgcaccctgg tggcggcgcg gctggccgcg gacgtgtgcg acgtgccgac cctgctggtc
     1561 gcgcgcaccg acgccgacag cgccaagctg ctcaccagcg atatcgattc ccgggaccag
     1621 gccttcctca ccggcgagcg cacgccggag ggcttcttcc gcatcagcgg cgggctggac
     1681 atggcgatcg ctcgggccct ggcctacgcg ccctacgctg acctgctgtg gtgcgagacc
     1741 tcgaccccgg acctcgacga ggctcgccaa ttcgcggaag cggtccacgc ccgcttcccc
     1801 ggcaagctgc tggcctacaa ctgttccccc tcgttcaact ggaagcgcaa gctggacgat
     1861 atcaccatcg cgcggttcca gcgggagctg ggcgcgatgg gctatcgctt ccagttcgtc
     1921 acgctggccg ggttccacgc cctcaactac ggcatgttcg agctggcgga agactatcgc
     1981 gaccgcggca tggcggccta cgcgcggctg caggaagccg agttcgccgc cgaatcacgg
     2041 ggatacaccg cgactcggca ccagcgcgag gtcggcaccg gctacttcga ccaggtgctg
     2101 caaaccatca ccggcggcct ggcttgcacg accgcgctgg acggctcgac cgaagcggcc
     2161 cagttcgccc gccaaactgc gacggtacag cgttcccctt agtgcgcctg agaccgcgtt
     2221 cacatatcgc gcggattacg gagcaaaagt catccacgga ttacacggat tacacggatg
     2281 ggctcaccaa gcacatcccc caaagtgccg ttgttgcttt gtggtttgac atcggcgtaa
     2341 tccgcgtaat ctgcggatgg ctttttgtgc gcaaggaacc tcgccgtccc cgcggccaaa
     2401 cccggcgatt gccggttgag gccgggggac gacacgagcg ggtcgattag agatcgtcgg
     2461 cccgggtccg ctggtactcc agagtaccgc aggcggccac ttgggcgccc tggtcctggg
     2521 acgagtgcac gtcggcgtag tactcaccct tctcctgcag gctcgcggtc accgatgcgg
     2581 aggccgtccc gctgccttgg gcatccacct tgactggctg ataggccgcg ctcgaaccga
     2641 cgatgggtcc gttgctgccg cacttgccct gatgcacgtg ccaggacagc gtcgcgttct
     2701 ggggcgcgtt ggtgatggac agcgtggcgc ggagctggtt gtccatcggt ttggccggct
     2761 ccggggcggg cggcggcatt gtgtcgcggg gcggcatggc ggggtccggg gtcaccgcgg
     2821 gcgcagccgg tgcttcgacc cgggcggttc cgctgatggc cgatcgatcc tttccctcga
     2881 gtttcgcggt ccatgtggct gggttactgc cgaccagggc gagcagaccc agcgtgccca
     2941 aggcgacggt gaagtgaccg gtgatcattg caggcatcct cccttggaat tgccgccgcc
     3001 cggaatgagc ggccggtgaa aagacaaaag gcgcgaatga ggccctaacc gcggcccccg
     3061 tttcgcgcct tcgacgggcg aagtctcgag cttcactcgt caggccggtc cgcccagcag
     3121 cgcggaccga tcgttcactc tgctggccaa gctagtgcac gccgtcgacg tgggtcaacc
     3181 ccttccgcgt cgatcacatc ttgcatcgca tgcgctcgtg caataccctc acatcctgat
     3241 cgtcgccact gggaccacat ggtctttcaa ctggcggccc cgcggtgacg gcacctgcag
     3301 cgcccggcct tcctgccagg ttcgaggagc ggcttcccca cctcctcgcg cgcctgacag
     3361 cgcttctcat cgcctggctg ggactgaccg tgttggtcgg gtgggcggcg ggatgggaca
     3421 gcctggtgcg gctgggtgcc ggatttccgg ccctatctcc taatgccgcg cttaccctgt
     3481 tgggggcagc cgcggcactg ggcgcagtcg atcacggcag ccggaggatc gcccgcttcg
     3541 ctgccacggt cgtgatcgtc atcagcagcc tgaccttcct gcaatacctc ctcaacctcg
     3601 atttcgggat cgaccggctc ctgctcccca ccgacgccga attgcccggc gtccgttacc
     3661 ccggacgcat ggccgcgggg tcggccctgt gtctcatgtt cagcgggacg gctctgctgg
     3721 cgctcagcgt gaaccggcac accgatgcta tcgacatcac cgcgggggtg ctgggcgtga
     3781 cggtggcctc cgtgggcggc atcgtgctgt tggggtacct caccggagtg ctgcaggagt
     3841 tgcggcatag cgttgtggcg gggatgtcac tctacggcgc cctcggtctg ctgctgctgg
     3901 gctcgagcat cgtggcgatc gcgtggcggc gcgacatggc cctcgcaacc cttccccgct
     3961 ggtcggcggc cgccatcgcc atggccggtg tcacggccac ggcgcttttc tggaaggcgc
     4021 tggtgcagcg ggacgaggaa aggctggatg agcgcctggg ttacgaggcg gcggtggcgc
     4081 ggcagtcggt cgccgcccag atcgatgccc tgatcaagga cttgggccgt ctcgggcggc
     4141 gcaccgggca actgtctctc gccgcctgga ccgacgacgc cactgccgcg gtgcgcgaca
     4201 tcgatctgta tgaggccgtg gcctggatcg accgggacga ccagctgcgg gcagtggtgc
     4261 cctggaccgc ggcggcctgg gtggaccggc tccgccaggg ggagcggtcc ggcgccgtgg
     4321 acacggtccg gatgcacggg taccccaccg atccggtttc ggccgagctg gtggaatcgg
     4381 agacgctgct ggcggtgcgg gtcgcggcct gcggcgactc gacctgcacc ggcaagctgg
     4441 cgggtttcat caatctggag cggctcttca cccgcgcgat cgggaccagc gatcgcgatc
     4501 tctgcctgac ggtcagcacc ggcggccgga ctctgtttgc ccgcgatgaa accagttgtc
     4561 ggcgcggcac ccgccgcgga tatgcctatc tcgccgtggg ccccctctcc tggaccctca
     4621 cggtcgcccc gaccccgctg ttgttgagcg ccaccagctc tcctctgccg atcgtgttgc
     4681 tctgcctcgg cgtcgtggtg agcggcctga tggccaccag tcttcgtctg gcccagacct
     4741 cgtggcagct agcgcgcgag gcggag
//
LOCUS       DASWKS010000563         1698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2901597, whole genome shotgun sequence.
ACCESSION   DASWKS010000563 DASWKS010000000
VERSION     DASWKS010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2901597"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VGA78_16125"
     CDS             <1..523
                     /locus_tag="VGA78_16125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895458.1"
                     /translation="AAQAREAGFTSDLLSYHARAGRFERAARGVYRLRQFPASPLEDL
                     FIAQLRAGPHSVVSHDSALALYELSDVLPAEVHLTVPPTASRRRPRIRQHTLRIAPDE
                     ISSREGLRVTTVPRTLADVARSGTSVDRVQQAIQEAVDRGLVGYRQLEDAADRYGGRA
                     ARIFRRFLRLRSP"
     gene            520..1410
                     /locus_tag="VGA78_16130"
     CDS             520..1410
                     /locus_tag="VGA78_16130"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEX9895459.1"
                     /translation="MNYETAAAFRRALEDRLRNQAVSTGAPLVRLRKMVAFDRLLARL
                     QAAEPSAWLLKGGFALQLRFGDRSRTTRDLDLLQVEPGADSWNELREAAGIDAQDWFE
                     FEIAMPVEIPGEDQPGGQRFAVQSRLDGRRFEDFHVDVGTGDPVVEPAEILETPDLLA
                     FAGIEPVRVPAYPLSQQVAEKLHAYTRPFPRGQQSSRVRDLADILLIASEARLDAAKL
                     REAIKQTFEVRLTHAVPPELPLPPESWWAPFRRLNDELKLGWEDLAQATGGAQRFLGP
                     ILSGTSAGVWDPPNWRWDQG"
BASE COUNT          282 a          559 c          564 g          293 t
ORIGIN      
        1 cgcggctcag gcgcgagagg cgggtttcac cagtgacctg ctgagctacc atgctagggc
       61 aggtcgcttc gagcgtgcgg ctcgcggcgt ctatcggctg cgacagtttc ccgcttcgcc
      121 ccttgaggac ctgttcatcg cacagctgcg cgccgggccg cactcggtgg tctcacacga
      181 cagcgcgctg gcgctctacg agctcagcga cgtcctgccg gcagaggtcc acttgactgt
      241 cccgccgacg gcctcccgcc gccgcccgag gatccgccag cacaccctgc ggattgctcc
      301 cgatgagatc agctccaggg aaggcctgcg ggtaacgacc gtgccccgca cgctggccga
      361 tgtcgccaga tcgggcactt ccgtggaccg cgtccagcag gccattcagg aggccgtgga
      421 tcgcggcctg gttggatacc gacagctgga ggacgccgcg gaccggtacg gcggtcgggc
      481 cgcccggatc ttccgtcgct tccttcggct tcgttcccca tgaactacga aaccgcggcc
      541 gccttccgcc gcgccctgga agaccggttg cgaaaccagg ccgtcagcac cggagcgccg
      601 ctggtccggc tgcgcaagat ggtggctttc gatcgcttgc tggcccgcct gcaggcggcc
      661 gagccttcgg cctggctgct caagggcggg ttcgcgcttc aactgaggtt tggcgaccga
      721 tcacggacca cgcgagacct ggacctgctg caggtggaac ccggcgccga cagctggaat
      781 gaactgcgtg aggcggccgg gatcgacgcg caggactggt tcgagttcga gatcgccatg
      841 ccggtggaga ttcctggcga ggaccagccc gggggtcagc ggttcgcggt ccagtccagg
      901 ctggacggac gccggttcga ggacttccac gttgacgttg gcacgggtga tccggtggtc
      961 gagccggccg aaatccttga gacgccggac ctgctggcgt tcgccggaat cgagccggtg
     1021 cgcgtgcccg cctatccgct ttcgcagcag gtcgccgaga aactgcatgc ttacaccagg
     1081 ccgtttccaa ggggtcaaca gagcagccgt gtcagagatc tggcggacat cctgctcatc
     1141 gccagcgagg cccggctgga tgcggccaag ttgcgcgagg cgatcaagca aaccttcgag
     1201 gtccgcttga cgcacgcggt tcctccggaa cttcctctgc cgcctgagag ctggtgggcc
     1261 cccttccgca ggctcaacga cgagttgaaa ctggggtggg aggacctggc ccaggcgacg
     1321 ggcggcgctc aacggttcct tggaccgatt ctgagtggta cgtctgcggg ggtctgggac
     1381 ccaccgaact ggagatggga tcagggctga acgggtgcgg cccacggagc accggcaatc
     1441 ctcactcggc agatggcggg cgtctagacg ccgaggctgc cccacacctt atctggtgca
     1501 gacaagctgc cttgcgaccg acccacaggt gctcgggctt gtgcatagca tacgtgtccc
     1561 cacaccgcat tgggtatagc tatcaggcga ttgctttaca caaacccact ttgtgtatag
     1621 aatcctatcc acaccgggcg ggccgatgaa acctgctgtc cccagaaagc tcccgcgcac
     1681 cgacatcgat tgggaggc
//
LOCUS       DASWKS010000564         4540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_673380, whole genome shotgun sequence.
ACCESSION   DASWKS010000564 DASWKS010000000
VERSION     DASWKS010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673380"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..847
                     /locus_tag="VGA78_16135"
     CDS             62..847
                     /locus_tag="VGA78_16135"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX9895460.1"
                     /translation="MKGPFHPLVTILRWLAGHLHGFYAAFGLFLVLGLALAVAGIWVF
                     AELAEEVAQGATRQFDERILLWMNGHASPWRDRLTMQITSIGNGAAVITIALVMCAFL
                     WVQRHRLAVILVVVGVAGSDLLNQAFKGSFDRPRPELFVLETPFQRPVSASFPSGHAM
                     SAIVVYILLAYLMGRLGGRGWFKVLVNTLAAILIVAIGASRMYLGVHYPSDVIAGYLL
                     GFAWITFCIFGLEAMEVAQGRSRRQQEQKLPNPPPRESAAAAS"
     gene            963..1415
                     /locus_tag="VGA78_16140"
     CDS             963..1415
                     /locus_tag="VGA78_16140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9895461.1"
                     /translation="MMRRLRCLLSAMVIGVAPAGAQRPAPVDTVLERIVRDYTGLYSR
                     DSFDVWTQLFRPGFTSLSTNADGTLTFRSLKDFLEAQRLGFQRAREMREELENVRIEQ
                     QGRLAAVWADFVFHYDGRASRGKLVLLAAADSGGWRFSSLMFSYDRNP"
     gene            1426..3102
                     /locus_tag="VGA78_16145"
     CDS             1426..3102
                     /locus_tag="VGA78_16145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9895462.1"
                     /translation="MRQDSPDVVIVGSGAGGGMAAYMLTRAGARVTLLEAGPLWWPTE
                     HSDMWKWNYESPRRGGGTRLRPFGEFDAGDGGWDIEGEPYTQAPGTTFDWYRGRILGG
                     RTNHWGRISLRFGPSDFRRKSLDGLGDDWPISYDDVKPYYDQVDRLIGIFGSVENLPN
                     EPDGVFLPPPEPRCWELLVKEAARKLGMTIIPSRLSILTRPHNGRPACHYCGQCHRGC
                     RANANFSSPGVLLRPALDTGRLTIIPNAMAREVTVAADGSARGVAFIDKSTGADREVR
                     ARVVVLAASACESARLLLNSKSSRHPQGLANGSGVVGKYLTDTVGAGRGGFVPRMLDL
                     PSHNCDGVGGAHLYFPWVLDNRQLDFPRGYHIEIWGGHGMPGAGAMSGLHQRPIGGGY
                     GPALKAAARSYYGATIGFDGRGEQIPNEHCYCEIDPGVVDRWGIPVLRFHWQWSDHEI
                     RQAKHMQKTFAQLIDAMGGTPTGSFDAETGGIAAGGKIIHELGTTRMGNDPRSSVLNG
                     NCQAHEVKNLFITDGGSFVSQADKNPTWTILALSMRTSDYIAGQMKRRTL"
     gene            3099..3683
                     /locus_tag="VGA78_16150"
     CDS             3099..3683
                     /locus_tag="VGA78_16150"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX9895463.1"
                     /translation="MSPLDRRELLALLAAAPASLLIPLSPAIRERASRHVAHAAAAGP
                     FQPAFFTPAEWETVRLLADLIIPRDERSGSATDAGVPEFIDFVMTDQPALQTPVRGGL
                     AWLERESVRRFGRRFVEGNDLDRKGLLDDIAWPARARPELSAGVAFFTRFRDLVANGF
                     YSSKEGVKDLGYQGNTFVAEWTGCPEEVTRRLGL"
     gene            complement(3816..>4540)
                     /locus_tag="VGA78_16155"
     CDS             complement(3816..>4540)
                     /locus_tag="VGA78_16155"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9895464.1"
                     /translation="SLATQDLPSRIEGAPDGTVRMSFAAKPGVCGNGRNISTHRRGSR
                     DGWEHDCDDGPVRVALEVRGRRVTAIRSYVGGRWRSLETSRQGGEITDLGAVSAPAAA
                     GYFLNLAEREVRVKGDLVLPAVIADSTEAWPALLRIAKNDRIGTETRKHAVFWLSQEA
                     GDAATRGLSDLVEDDDEDREVRKQAVFALSQLPHDQGVPALIKVARTNTDREIRKSAI
                     FWLGQSEDPRAIALFEELLTKR"
BASE COUNT          702 a         1523 c         1506 g          809 t
ORIGIN      
        1 cgtctattag atagacaccg tcagggagtg gaccatcgcc gaacacgcct cccgggccgc
       61 agtgaagggc ccgtttcatc cgctggttac gatcctgcgc tggctggcag gccatctgca
      121 tggattctat gccgcattcg gcctcttcct ggtgttgggg ctggccctgg cggtggccgg
      181 gatctgggtg ttcgccgagc tggcggagga ggtggcccag ggcgcgaccc gccagttcga
      241 tgagaggatc ctgctctgga tgaacggcca cgcaagcccc tggcgcgacc ggctgacgat
      301 gcagatcacc tcgattggta acggggccgc cgtgatcacg attgcgctgg tcatgtgcgc
      361 ctttctctgg gtccagcgcc atcggctcgc ggtcattctg gtggtggtcg gggtggccgg
      421 ctccgacttg ctgaaccagg cgttcaaggg ctcgttcgac cggcctcggc ccgagctgtt
      481 cgtgctcgag accccatttc aacgtccggt gtcggcctcc ttcccctcgg gccatgccat
      541 gtcggcgatc gtggtgtaca tcctgttggc gtacctgatg ggtcggttag gcgggcgagg
      601 ttggttcaag gtgctggtca acacgctggc cgcgatcctc atcgtggcca tcggggcttc
      661 gcgcatgtat ctcggagtcc actacccctc cgacgtgatc gccgggtacc tgctcggctt
      721 cgcctggatc acgttctgca tcttcgggct ggaagcgatg gaggtggccc agggccgatc
      781 ccgtcgccag caggaacaga agctgcccaa cccgccgccc cgcgaatccg ccgcagcggc
      841 ttcttgaatc agtcctaatc gcgggtcgag cgagccgacc tcgcgggact ggcgaggtct
      901 cgcgcccggt agcatccttc cctcatcaac cgctacgtgg atcttccggc ccgaggcaca
      961 ccatgatgcg acgcctgcgg tgtctgcttt cggcgatggt cattggggtc gctcccgcgg
     1021 gggcccagcg gccggcgccc gtcgataccg tgctggagcg gatcgtacgc gactacaccg
     1081 ggctctattc ccgcgattcc ttcgacgtct ggacccagct cttccggccc ggctttacct
     1141 cgctttcgac caacgcggat gggacgctga ccttccgatc gctcaaggac ttcctcgagg
     1201 cccagcggct gggattccag cgggcccgcg agatgcgcga ggagctggag aacgtccgga
     1261 tcgagcagca gggccggctc gcggccgtgt gggccgattt cgtctttcac tacgatggcc
     1321 gggcgagccg ggggaaactg gtgctgctgg ctgcggccga tagcggcggc tggaggttca
     1381 gctccctgat gttctcgtac gaccgcaatc cctgacccca tcggcatgcg gcaagactcg
     1441 cctgacgtag tcatcgtggg cagcggcgcc gggggcggca tggccgccta catgctcacc
     1501 cgcgccggcg cgcgggtcac cctgctcgaa gccggtccgc tctggtggcc caccgagcac
     1561 agcgacatgt ggaagtggaa ctacgaatcg cctcgacgtg ggggtgggac ccggctgaga
     1621 ccgttcggcg aattcgatgc cggcgatggc ggctgggata tcgaaggcga accctacacc
     1681 caggcgcccg gcaccacctt cgactggtac cgcggccgga tcctgggcgg acgcaccaac
     1741 cactggggtc ggatctcgct ccggttcggt ccctccgatt ttcgccggaa gagcctcgat
     1801 ggcctgggcg acgactggcc catcagttac gacgacgtca agccctatta cgaccaggtc
     1861 gaccggctca tcgggatctt tgggagcgtg gagaacctgc cgaacgagcc ggatggggtc
     1921 tttctgccgc cgcccgagcc ccgctgctgg gagctgctgg tgaaagaggc ggcgcggaag
     1981 ctcggcatga ccatcatccc gtcgcgcttg tcgatcctga cccggcccca caatggccgg
     2041 ccggcgtgtc attattgcgg ccagtgccat cgcggctgcc gggccaacgc gaacttctcc
     2101 tcgcccggcg tgctgctcag accggcgctc gataccggcc ggctcaccat catccccaac
     2161 gcgatggcgc gggaggtgac ggtggcggcc gacggctcgg cccggggtgt ggccttcatc
     2221 gacaagtcga ccggcgcgga ccgggaggtc cgggcccgcg tcgtagtgct ggcggccagt
     2281 gcctgcgaat ccgcgcgact cctgctcaac tcgaaatcct ctcgccatcc tcaaggtctg
     2341 gccaacggga gcggagtggt agggaagtat ctgaccgata cggttggagc cggcaggggc
     2401 gggttcgttc cccggatgct ggacctgccg tcccacaact gtgacggggt gggtggtgcc
     2461 cacctctact tcccctgggt actcgacaac cgccagctcg attttccccg tggctaccac
     2521 atcgagatct ggggcggtca cggcatgccg ggtgccggtg ccatgagcgg tctgcaccag
     2581 cgtcccatcg gcgggggcta cggtccggcg ctcaaggctg cggcccgaag ctattacggg
     2641 gccaccatcg ggttcgacgg acgaggcgag cagattccca atgagcattg ctactgcgag
     2701 atcgatcccg gggtggtcga tcgatggggc atcccggtgc tgcggttcca ctggcagtgg
     2761 agcgaccatg aaatccggca ggcgaagcac atgcagaaga cctttgccca gttgatcgat
     2821 gcgatgggcg gaaccccgac cgggagtttc gacgccgaga ccggcgggat cgccgccggt
     2881 ggcaagatca tccatgagct gggaaccacc cggatgggga acgatccccg ttcctcggtg
     2941 ctgaacggca actgtcaggc acacgaggtg aagaacctgt tcatcaccga cgggggttcg
     3001 ttcgtctccc aggccgacaa gaacccgacc tggaccatcc tggcgctctc gatgcgaacc
     3061 agcgactaca tcgccggtca gatgaagcgg aggaccttgt gagcccgctg gaccgccgcg
     3121 agctgctggc gctcctggct gcggcaccgg cttccctgct gatcccgttg tctcccgcga
     3181 tccgggaacg cgccagccgc cacgtggccc acgcggccgc ggctgggccg ttccagccgg
     3241 ctttcttcac gccggccgaa tgggaaaccg tgcgcttgct ggccgatctg atcatccccc
     3301 gcgacgagcg ctccggcagc gccaccgatg ccggggtgcc ggagttcatc gacttcgtga
     3361 tgaccgacca gcccgccttg cagaccccgg tccggggcgg actggcctgg ctggagcgcg
     3421 aatcggtccg ccgcttcggc cggcgattcg tagagggcaa cgacctggac cggaaggggt
     3481 tgttggacga catcgcctgg ccggccaggg ctcggcccga gctgtcggcc ggggtggcgt
     3541 tcttcacccg ctttcgcgat ctggtggcga acggcttcta ctccagcaag gaaggcgtga
     3601 aggacctggg atatcagggc aacaccttcg tcgcggaatg gacgggatgc ccggaagagg
     3661 tgactcggag gttgggtctc tgagggggga gtgaaccgga gaatgcccaa tgcccaatgc
     3721 ccaatgcaga gggagcgcgc cggaccgact ctttctgcaa tcggcattgg gcactgggca
     3781 ttctccggtt tattcccccc tcccacccgc cccctctagc gtttggtgag aagctcctcg
     3841 aacagcgcga tcgcccgcgg gtcctccgac tgtcccagcc agaagatggc gctcttgcgg
     3901 atctcgcggt cggtattggt ccgcgccacc ttgatcaggg ccggcacgcc ctggtcgtgg
     3961 ggaagctgcg acagcgcgaa caccgcctgt ttccgtactt cccggtcttc atcatcgtcc
     4021 tcgaccaggt cggacaggcc ccgggtggcc gcgtcacccg cctcctggct gagccagaac
     4081 accgcgtgct tccgggtttc ggtgccgatc cgatcgttct tggcaatgcg aagcagggcg
     4141 ggccaggcct cggtgctgtc ggcgatgacc gccggcaaga ccagatcgcc tttgacccgg
     4201 acctcacgtt cagccaggtt caggaaatag cccgccgccg ccggggcgct caccgcgccc
     4261 aagtccgtga tctcgcctcc ctgccggctg gtctccaacg accgccaccg cccgcccacg
     4321 taactccgga tggcggtcac tcgccggccc cgaacttcca gggccactcg aaccggaccg
     4381 tcatcgcaat cgtgctccca gccgtcccgg ctgccgcgcc gatgggtgga gatgttccgg
     4441 ccattgccgc acacccccgg cttggccgcg aaggacatcc gaaccgtgcc gtccggagcg
     4501 ccttcgatcc ggctgggaag atcctgcgtc gcgagcgacg
//
LOCUS       DASWKS010000565         1927 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1413459, whole genome shotgun sequence.
ACCESSION   DASWKS010000565 DASWKS010000000
VERSION     DASWKS010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413459"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..>1927
                     /locus_tag="VGA78_16160"
     CDS             137..>1927
                     /locus_tag="VGA78_16160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895465.1"
                     /translation="MPAGFRDGRYILFAWVHHQGQLPPVVVDPLEQRLYARCCNGDRL
                     AIMEVGDPAPTRLAATLLADVLSEGSRGGVIAREDQGWFAFSTRAVTHHSPVIPRLDR
                     FAVPWNYQLGPYLPMVGGVDRAFPGLLPAVNFDLSAGELNIRIVRPDGVVDALGPGPL
                     TRLATSTPVTPWNTNVSEGGGSLGEVPQLLGPGRTFAYEFPIDGDYVITLEGRIADVY
                     GRTYLISGTYDVTVADVLDIETAALPGTPFEVGDSLPVALYVMPGLPVSVDYTVTTFH
                     ADGSTASAEYSGTANAFGWWDGGGARYLFDRPGEYRVDAEARFSGAGNLWVGRMTFGG
                     VIASPDPAIAVHGRRGPDGLTYLAPVWSFDTDYGDQQRDHFQLPYFSGDILWSTPITE
                     LTDPALNLRASVSGIVHSSIQILDQQNELAQRALAQVAAFEGYTDAIDLSELVRGNQI
                     PLITATDPAAGVVGTHPDEFDFWAYFYNAVERPGVRVREIIRGSDNQAEYWRFDDAYH
                     LQSGNGPEGDLPGDFKFIYGGAVLRDDIAGEGEYAIYGSGWVHTEYDDPLGGRVMPPF
                     QGAAGGPSGGPLFTIFETPVDIFFVPLAVRP"
BASE COUNT          316 a          633 c          631 g          347 t
ORIGIN      
        1 cgtccttcgg accccctcag ggctggccat cgaacggacc tggggcgccc aaccgctcgc
       61 cacgctggcg gaggttgagt ttacctggca gaaagaaggg gctgtttgga ctggtaccgt
      121 agaagggaac gctcaggtgc ctgccggttt cagggacggc cgctatatcc tgtttgcctg
      181 ggtccatcac cagggacaat tgccgcctgt agtggtagac ccgctggagc agcggctgta
      241 cgcccgctgc tgcaacggcg atcggctcgc gatcatggag gtcggcgatc ccgcgccgac
      301 ccgcctggcc gccacactgc tggccgacgt gctcagcgaa gggtcgcgcg gcggggtcat
      361 cgcccgcgaa gaccagggct ggtttgcgtt cagcacccgc gcagtgaccc accacagccc
      421 ggtcatcccc aggctggatc gattcgctgt gccctggaac taccagctcg gtccttacct
      481 gccgatggtc ggtggcgtgg accgggcatt tcccgggctg ctcccggcgg tcaacttcga
      541 tctctccgca ggagaactga acatccggat cgtgcgcccc gacggggtcg tcgacgcgct
      601 cggcccgggg ccgctcaccc gcctggcgac gagcacgccg gtcacaccgt ggaacacgaa
      661 cgtctccgag ggcggcggga gcctggggga ggtgccgcag ctgctcggtc ccggcaggac
      721 ctttgcttac gaattcccga tcgacgggga ttacgtcatc acgctcgaag gccggattgc
      781 cgatgtctac gggagaacct atctgatctc gggcacttac gacgtcaccg tcgcggatgt
      841 gctcgatatc gaaaccgctg ctctgccggg cacgcctttc gaggtgggcg acagcctgcc
      901 ggtcgcactg tacgtgatgc cgggtttacc ggtttcggtc gattacaccg tgacaacctt
      961 tcatgcagat gggtcgacgg catcggccga atactcgggg acagccaatg cgttcggctg
     1021 gtgggacggg ggcggagcga ggtatctttt cgatcgtccc ggcgaatacc gcgtcgacgc
     1081 ggaggcgcgc ttctccggag cggggaatct gtgggtcggt cggatgacct tcgggggcgt
     1141 catcgcctca ccggacccgg ctatcgccgt gcacggccgg cgcggcccgg acgggctgac
     1201 ctatctggcg ccggtctgga gcttcgacac cgattacggc gatcaacaaa gagaccactt
     1261 ccagctcccg tatttcagcg gggacatatt gtggagcacg ccgatcacgg aactcacgga
     1321 tccggcgctg aatctgaggg cctccgtttc tggcatcgtc cattcgagca tccagatcct
     1381 cgaccagcaa aatgagctgg cccagcgagc ccttgcgcag gttgccgcgt tcgagggcta
     1441 caccgacgcc atagacctgt ccgaactggt ccgcgggaac cagattcccc tgatcacggc
     1501 caccgatccg gctgcgggcg tggtcggaac ccacccggat gagttcgatt tctgggccta
     1561 tttctacaat gcggtcgagc gccccggcgt gcgggtgcgc gagatcatcc ggggcagcga
     1621 caaccaggcc gaatactggc gcttcgacga cgcctaccat ctccagtccg gcaacggccc
     1681 ggaaggcgac ctgcccgggg atttcaagtt catctacggc ggcgccgtcc tgcgcgacga
     1741 tatcgccggg gagggcgaat atgccatcta cggctccggc tgggtccaca ccgagtacga
     1801 cgacccgctc ggcggccggg tcatgccgcc gttccaaggc gcagccggcg gccccagtgg
     1861 tgggccattg ttcaccatct tcgagacgcc ggtcgatatc ttcttcgtcc cgctggccgt
     1921 gcggcct
//
LOCUS       DASWKS010000566         2875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_300059, whole genome shotgun sequence.
ACCESSION   DASWKS010000566 DASWKS010000000
VERSION     DASWKS010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300059"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="VGA78_16165"
     CDS             complement(<1..962)
                     /locus_tag="VGA78_16165"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895466.1"
                     /translation="MDFVLTLHSHLPWVLHHGRWPHGSDWLCEAAVDTYLPLLEVLER
                     LELDDQPVPLTIGVTPVLANQLAHPDLATELEGFLEQRLAACVEATRDFEASGETQLR
                     PLTQFWHTRLTRLRNLFLRLDGGMIGTLARHARAGRIELLSSAATHGFLPLLRRPESV
                     QLQLRLGRQEHRRLFGLDPAGCWLPECAYRDGLEQPLRDAGFDFFFVDAHMAKAGRSL
                     GLYGERDFVDGMREPEDTPLDAVYPRSPYRAYYLRPERGAPVAVLVREPETTLQVWSR
                     HQGYPGDGGYLEFHKIRWPGGLKLWRVTNPDVDLGGKQPYDPNVG"
     gene            complement(962..2503)
                     /locus_tag="VGA78_16170"
     CDS             complement(962..2503)
                     /locus_tag="VGA78_16170"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HEX9895467.1"
                     /translation="MPTTRQSPETTSDRPYARRPVSALRLSDGTPVTVVHLAVEYFPY
                     ARTGGLAEAANGLARFQSFAGVPTMVVMPLHRSARSLAGPLEPIGAPIEVELGGRRES
                     FQLLRQSRARDRARVFFLQHDGFFDRAGIYGEAGADYPDNAERWAFFCRAAVDALPRL
                     APVPLILHAHDWHAALAFVYLRTRFRGDPWHDAVRTVLSVHNAGFQGHYPPSMLGALG
                     IPPALFNWRRLEWYGQINLLKGGLVFADAVVTVSPNHARELCTDAGGFGLQDTFRALG
                     ARFTGILNGIDQRTWDPESDRVIAARYSRDDPSAKVACKRAVQQRFGLQENVRTPLFV
                     MAARLVTQKGIDIILDGPYLVGLAAQFAFLGSGEQRFERALHQLSRVFPGRVAVTTHF
                     SDELEHELMAGGDFLLMPCQYEPCGLTQMRAQRYGTLPVVRRVGGLADTVEDGTTGFV
                     FDEYGPEPLLGAALRGLDAWSNPEERRRLCREAMQRDFSWETSVDRYLALYRRVLAGD
                     LAASL"
     gene            complement(2478..>2875)
                     /locus_tag="VGA78_16175"
     CDS             complement(2478..>2875)
                     /locus_tag="VGA78_16175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895468.1"
                     /translation="PRVPMEASGTSGMKAALNAVPQLSTLDGWWEEGWDGSNGWTIQR
                     HEEALSPEEADARDAESLYRLLEEEVVPLYYERDARGIPIGWVDRMRNALRVAAGQFT
                     AHRMLRDYSERYYVPAMRGDVSADDPPIA"
BASE COUNT          478 a          996 c         1002 g          399 t
ORIGIN      
        1 ccgacgttgg gatcgtaggg ttgcttgccg cccaggtcca catccgggtt ggtcacccgc
       61 cagagcttga gcccgccggg ccaccggatc ttgtgaaact cgagataccc gccatcaccg
      121 gggtatccct ggtgccggct ccacacctgc aaggtcgtct ccggctcccg caccaggacg
      181 gccaccgggg caccccgttc gggccggagg tagtaggcgc ggtagggact ccggggatac
      241 accgcgtcga gcggcgtgtc ctccggctcc cgcatgccgt ccacgaagtc gcgctcaccg
      301 tacagaccca gcgatctgcc ggccttggcc atgtgggcgt cgacaaagaa gaaatcgaag
      361 ccggcgtcgc ggagcggctg ctccagtccg tcgcgatagg cgcattcggg cagccagcac
      421 ccggccgggt cgaggccgaa gagccggcga tgctcctggc gtcccagccg caactgcagc
      481 tgcacgcttt cgggccggcg cagcaggggc aggaacccgt gggtcgcggc cgaggagagc
      541 agctcgatgc ggccggcacg ggcgtggcga gcgagggtgc cgatcatgcc cccgtccagc
      601 cgcaggaaca ggttgcggag ccgggtaagc cgggtgtgcc agaactgagt gaggggccgg
      661 agctgggtct cgccgctggc ttcgaaatcc cgcgtcgcct ccacgcaggc cgccagccgc
      721 tgctccagaa acccttccag ctcggtcgcc agatcgggat gcgccagttg attggccagc
      781 accggcgtga ccccgatggt gagcggaacg ggctggtcgt ccagctccag acgctccagc
      841 acttcgagca gcgggaggta ggtgtcgacc gcggcctcgc acagccaatc gctgccgtgg
      901 ggccagcgcc cgtgatgcag cacccagggc aggtgactgt ggagcgtgag gacgaagtcc
      961 atcagagcga agccgccagg tcgcccgcca gcacccggcg gtacagcgcc aggtagcggt
     1021 cgaccgacgt ctcccagctg aaatcgcgct gcatggcctc gcggcagagc cggcgccgtt
     1081 cctcggggtt gctccacgcg tcgaggcccc gcagggccgc gcccagcagc ggctcggggc
     1141 catactcgtc gaacacgaag ccggtggttc catcctcgac cgtatcggcc agtccgccca
     1201 cccgacggac caccggcagg gtcccgtatc gctgcgcccg catctgggta aggccgcagg
     1261 gctcgtattg gcagggcatc aggagaaagt caccgccggc catgagctcg tgctccagct
     1321 cgtcgctgaa gtgggtcgtc accgccaccc gccccgggaa cacacgggac agctggtgca
     1381 gcgcccgttc gaaccgctgc tcacccgagc cgagaaaggc gaactgggcg gcgaggccca
     1441 ccaggtaggg accgtcgagg atgatgtcga tgcccttctg ggtgaccagc cgcgccgcca
     1501 tgacaaacag gggagtgcgg acgttttcct gcaggccgaa ccgctgctgc acggcgcgct
     1561 tgcaggccac cttggcggaa ggatcgtcgc gactgtagcg ggcggcgatc acccggtccg
     1621 actccggatc ccaggtccgc tggtcgatgc cgttgagaat accggtgaac ctcgccccca
     1681 gtgctcggaa ggtgtcctgc aggccgaacc cgcccgcgtc ggtgcagagc tcccgggcgt
     1741 ggttggggct gaccgtgacc acggcatccg cgaagaccag tccgcccttg agcagattga
     1801 tctggccgta ccactccagc cgccgccagt tgaacaacgc cggcgggatc cccagtgccc
     1861 ccaacatcga gggcgggtag tggccctgga agccggcgtt gtgcaccgac agaacggtcc
     1921 ggacggcgtc gtgccaggga tcgccccgga accgggtccg gagatagacg aaggcgagcg
     1981 cggcgtgcca gtcatgggcg tgcaggatca gagggaccgg cgcgagccgg ggcaacgcgt
     2041 cgacggcggc gcggcagaag aaggcccacc gctcggcgtt gtcggggtag tcggcgcccg
     2101 cttccccata gatgccggcc cggtcgaaga acccatcgtg ctgcaggaag aacacccggg
     2161 cccggtcgcg ggcgcgggac tggcgcagca gctggaacga ttcccgccgg ccacccagct
     2221 ctacctcgat cggggcgccg atcggttcca gggggccggc cagggaccgg gcgctccggt
     2281 gcagcggcat gaccaccatg gtgggcacgc cggcaaagct ctggaagcgg gccagtccgt
     2341 tggccgcctc ggccaggccg ccggttcgcg cgtagggaaa gtactcgaca gcaagatgca
     2401 ccacggtgac cggcgtgcca tcggacagcc gcagggcgga gaccggccgc cgggcgtagg
     2461 gccggtcgga agtcgtctca ggcgattggc gggtcgtcgg cactcacatc gcctcgcata
     2521 gcaggcacat agtaacgctc gctgtagtcg cgcagcatcc ggtgggccgt aaactggccg
     2581 gccgcgaccc gcaacgcatt gcgcatacga tccacccacc cgatcgggat gccgcgggcg
     2641 tctcgctcgt aataaagcgg gaccacctcc tcttcgagca gccggtagag cgactcggca
     2701 tcgcgcgcgt cggcttcctc gggggagagc gcctcctcgt gacgctggat ggtccacccg
     2761 ttcgagccgt cccacccctc ctcccaccag ccatccagcg tggaaagctg cggcaccgcg
     2821 ttgagggccg ccttcatgcc gctggtgccg ctcgcttcca taggcacccg gggca
//
LOCUS       DASWKS010000567         3028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1056424, whole genome shotgun sequence.
ACCESSION   DASWKS010000567 DASWKS010000000
VERSION     DASWKS010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1056424"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1920)
                     /locus_tag="VGA78_16180"
     CDS             complement(<1..1920)
                     /locus_tag="VGA78_16180"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9895469.1"
                     /translation="MRIQTLGGLSAHSAEGLLSGEAAQPRRLALLALLARVGDRGISR
                     DRLVGYLWPEADEDRARRSLSQALYSLRQGLRSEELFLGTQELRLNPALVTSDLAEFD
                     STRREGNWGRAAELYTGPFLDGFHLPGTSEFERWAEAERQTLNNEYAELLERLAVQAD
                     RSGEYRSAVGWWRKLAALDPLNARIALALMRSQVAAGDRTAALRHARVYQALVEQELD
                     LPADREVLALAERIRTQPVDPVEPVSPPIREPLAGPALPVPLQVPPAPEPVPGMAEAP
                     SRAPVRRAYLTGIVLLPVVVLLALWAWSSRDRGGPVALPAETPLLMVGRIADYGGAPN
                     GGLGRPLADMIGTDLARAPRLKVISTARVYGILAQLRVSDTVSAALMSAARHAGATEL
                     LDGALFDLGGGRIRLDLRRVDVATGSVLGAYSVQGSDPFGLADSATVLLVADLGTTAP
                     GGLIADLTTRSLDAYRAYDAGLQDYFRRSFAAAERHFADALRADSRFAMASFYYAVAS
                     EDGAERIARLNHALRLAAHASDRERLIISAYWALANAAPSTRALAETLAVRYPAEVDA
                     HLFLGHALYMQEDFLGGIRSFARVIAMDSLGLRGGGARCAACDAYSNLIAGYATVDSF
                     SAALAAARAWGAAQPR"
     gene            2060..3022
                     /locus_tag="VGA78_16185"
     CDS             2060..3022
                     /locus_tag="VGA78_16185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895470.1"
                     /translation="MRSTIFSTLTLAAAMLLGACGDDSLTAPSTTRSTAIGPDIAKGG
                     GKGKGVKPSNRIVYTHKDANGFTDIYSMNPDGGNVVRLTPASGYNGSPRWTADRTKIV
                     FVSSRAGAENIFIMNADGSNVVQLTFGGCADRNPAPSPDGTRIVFQRACAGGGLFIMN
                     IDGSNPTQHTFNSSHKQPSWSPDGSKIMFASTENAIPGIWKVNSDSPTFSLVYACGVN
                     PCSNPMYSPDGTKVAFWSSVNEGEIIVASSLVHDGPILLELAHLGAGSEYAPTWSPDG
                     TKLVFTAGLFGTDVELYSVNSADGLGLTKLTSVVGPDAAPSWHR"
BASE COUNT          566 a         1060 c          948 g          454 t
ORIGIN      
        1 cctgggctgg gctgcacccc aggcgcgcgc ggccgcgagc gcggccgaga acgaatccac
       61 cgtggcatat cccgcgatca ggttcgaata ggcatcgcac gctgcgcagc gggctcctcc
      121 cccacgcagg ccgagagagt ccatcgcaat cacccgggcg aacgagcgga taccgcccag
      181 gaaatcctcc tgcatgtaga gtgcgtggcc caggaacaga tgggcatcca cctcagcggg
      241 ataccgcacc gccagggtct ccgccagagc ccgggtggac ggcgccgcgt tcgccaatgc
      301 ccagtacgct gaaatgatca gacgctcacg atcgctggca tgggcggcca ggcgcagcgc
      361 gtggttgagt ctcgcgatcc gctcggcacc gtcctccgaa gccaccgcgt agtaaaagga
      421 cgccatcgcg aacctggaat cggcccggag cgcatcggcg aaatgccgtt ccgcggcggc
      481 gaacgaccgg cggaaatagt cctgcaggcc ggcatcgtag gcgcggtacg cgtccagcga
      541 tcgggtggtg agatcggcga tcagtccacc cggagctgtg gtgccgagat cggccaccag
      601 caatacggtg gcgctgtccg ccagtccgaa gggatcgctg ccctgcaccg aataggcccc
      661 gagcacggag ccggtcgcta cgtccacccg gcgcagatcg agcctgatcc gccctccacc
      721 caggtcaaag agggctccgt ccagcagctc ggtcgctccg gcgtgccgcg ccgcgctcat
      781 gagcgcggct gacacggtat cggaaacccg gagctgagcc aggatcccat agacccgcgc
      841 ggtactgatc accttgagtc gcggcgcccg ggccagatcg gtgccgatca tgtcggccag
      901 cgggcgtccc agcccgccgt taggcgcccc tccatagtcc gcgatccggc ccaccatgag
      961 cagcggcgtc tccgccggta gcgcgacagg gccaccgcga tcacgcgacg accaggccca
     1021 gagcgcgagc agtaccacaa ccggaagcag tacgatcccg gtcagataag cgcgcctgac
     1081 cggagctcgt gagggagcct cggccattcc aggaaccggc tctggcgcgg gaggaacttg
     1141 taacgggact ggtagagccg ggccggccaa aggctcacgg atcggcggtg acacgggttc
     1201 gactgggtcc accggctggg tccgaatccg ttccgccaga gccaggactt cgcggtcggc
     1261 cgggagatcg agctcctgct ccaccagggc ctgatacacg cgggcgtgcc gcagcgccgc
     1321 ggtgcgatcg cccgcggcca cctgcgatcg catcaaagcg agggcgatac gggcattgag
     1381 ggggtcgagg gccgcgagct tacgccacca cccaacggcg ctccggtact ccccgctccg
     1441 gtccgcctga acggccagac gctcgagcaa ttcggcgtac tcgttgttca gcgtctggcg
     1501 ttcggcttcc gcccaacgtt cgaactcgga ggtcccgggg aggtggaacc cgtccaggaa
     1561 tggtccggtg tagagctcgg cggctcttcc ccagttgccc tcgcgccgag tcgaatcgaa
     1621 ctccgccaga tcgctggtca ccagggcggg gttgagccgt agctcctggg tgcccagaaa
     1681 caactcctcg ctacgcaacc cttggcgcaa cgaatagagc gcctggctca gactccgccg
     1741 ggcccggtct tcatccgctt cgggccagag gtaacccacc aagcggtcac gcgagatccc
     1801 ccgatctccc acccgggcca ggagcgccag cagcgccaag cggcgtggtt gcgccgcctc
     1861 gcccgacagc aacccctcgg cgctgtgcgc cgacagccca cccaacgttt ggattcgcaa
     1921 tgacttgtga cgccttgaga agaccttgag agcgtctgga cgccgatcgg taacgtaggt
     1981 cccgtcgaat gggccggcaa gaacgcaagc cccgacagga cccgagcagg tatccaacaa
     2041 cccgatcagg aggcacacca tgcgttccac catcttctcc accctgaccc tcgccgccgc
     2101 catgctcctc ggcgcctgcg gcgacgacag cctcaccgct ccgtccacca cccggtccac
     2161 tgcgatcggc ccggacatcg ccaagggcgg cggcaagggc aagggcgtca agcccagcaa
     2221 ccgaatcgtt tacacgcaca aggacgccaa tggatttacc gacatctaca gcatgaaccc
     2281 ggacgggggc aacgtagttc ggctcacccc cgccagcggc tacaacggta gcccgcgctg
     2341 gaccgccgac cggaccaaga tcgtcttcgt cagcagccgc gccggcgccg agaacatctt
     2401 catcatgaat gcggacggga gcaatgtggt gcagctcacc ttcggcggct gcgccgaccg
     2461 gaatcccgct ccttctcccg acggcacccg gatcgtgttc cagcgggcct gcgccggcgg
     2521 ggggctgttc atcatgaaca tcgatggctc caatccgacc cagcacacct tcaattcgag
     2581 ccacaagcag cctagctggt cgcccgacgg cagcaagatc atgtttgcca gcaccgagaa
     2641 cgcgattccc ggtatctgga aggtgaactc cgatagcccc accttcagcc tggtttatgc
     2701 ctgcggggtc aatccctgca gcaaccctat gtactcgccc gacggaacca aggtggcatt
     2761 ctggtccagc gtgaatgagg gcgagatcat cgtggcatct tcattggtgc acgatggccc
     2821 tatcctcctt gagctggccc atctcggcgc tggatcggaa tacgcgccga cctggtcccc
     2881 cgatggcacc aaactcgtgt tcacggccgg gctcttcgga accgacgtcg agctgtattc
     2941 ggtgaattca gccgacggct tgggtctgac caagctgaca tccgtggtcg gaccggatgc
     3001 ggccccaagc tggcaccggt aagctggg
//
LOCUS       DASWKS010000568         2276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_673762, whole genome shotgun sequence.
ACCESSION   DASWKS010000568 DASWKS010000000
VERSION     DASWKS010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673762"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1010
                     /locus_tag="VGA78_16190"
     CDS             <1..1010
                     /locus_tag="VGA78_16190"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9895471.1"
                     /translation="RAAVGDLLFCRPEQVVFGQNMTTLTFHLARGLGRRFDKGDILVI
                     TDLDHHANRAPWETLVAERGVTIRSVRFDRRSGELDWKGLDRALEGRVRLLAIGAASN
                     ALGTITDVGAVCRMARERGVLSFVDAVHFAPHQLVDVKQIACDFLACSPYKFYGPHLG
                     VMWGRGVLLEEVPVPKLEPAPDAVPERLESGTLSHEAIVGTRAAVDFLAGIAPGRASR
                     REALEHAYAELHRRSAPQFERLWSGLRALPGVRVYGPPPDRDRTPTLAFTVEGKTSKA
                     VARELATAGLFLSHGDFYAATVVQRLKVEGLVRAGCACYTTNEEVERLIEAVRELSIN
                     H"
     gene            complement(1088..2029)
                     /locus_tag="VGA78_16195"
     CDS             complement(1088..2029)
                     /locus_tag="VGA78_16195"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HEX9895472.1"
                     /translation="MALFVLPDSAWAWTPGTHIWLGETILANLHLLPASVSDLLHAFP
                     YDFLYGSIAPDISFAKRYVPPGRHSHFWHVGQEVYADAPSDAMKAFGLGYLAHLSADT
                     MAHNFYVPRQLLLTSSTRSMGHSYWEIRAETHLTDEYARKARDIIRMDHAQADRHLER
                     IISPTIFSVPTNRRIFRGMVHLAHTRTWQRAMQAARERSRWLLTNQDLEQHLGAAYDA
                     TVEVLADEKALARRLDPSGHLPLSKAKAMRRSAILRGAWYEPERLVQVAQEQFGLPAL
                     LPGYFADSAVKKPWELPAPAHALAEESQGDRRLTIDD"
BASE COUNT          353 a          777 c          774 g          372 t
ORIGIN      
        1 cccgcgccgc cgtcggcgat ctcctcttct gccggcccga gcaggtggtc ttcggccaga
       61 acatgaccac gctcacgttc cacctggcgc gcgggctggg ccggcgcttc gacaagggcg
      121 acatcctcgt catcaccgat ctggaccatc acgccaaccg agccccctgg gagaccctgg
      181 tggcggaacg gggcgtgacc atccggtcgg tgcgcttcga tcgccgcagc ggggagctcg
      241 actggaaggg actggaccgg gccctggagg gacgggtccg gctgctggcg atcggcgcgg
      301 cgtccaacgc ccttgggacc atcaccgatg tcggggcggt ctgccgcatg gcgcgggaac
      361 ggggggtcct gtcgttcgtg gacgcggtgc acttcgcgcc ccaccagctg gtggatgtca
      421 agcagatcgc ctgtgacttc ctggcctgtt cgccgtacaa gttctacgga ccccacctgg
      481 gggtcatgtg gggccggggg gttctgctgg aggaagtccc ggttcccaag ctggagcccg
      541 cacccgatgc tgtgcccgag cggctggaga gcgggaccct gagccacgag gcgatcgtcg
      601 gaaccagggc cgcggtcgat tttctggcgg ggatcgctcc cggccgggcg tcccggcggg
      661 aggccctgga gcacgcctac gccgagctgc accgtcgttc ggcacctcag ttcgaacggc
      721 tctggtccgg gttgcgggcc ctccccggcg tccgggtcta cggcccgccc ccggatcggg
      781 accggacccc gaccctcgcg ttcaccgtcg aaggcaagac ctcgaaggca gtcgcgcgcg
      841 agctggccac cgccgggctc ttcctgtccc acggggactt ctatgcggcg acggtggtgc
      901 agcggctcaa ggtggaaggc ctggtgcggg cagggtgcgc ctgctacacc accaatgaag
      961 aggtggaaag gctgatcgaa gcggtgcggg agctttccat caaccattga cgattgacga
     1021 ttgacgattg acaatcgtta ggcgaagcgc atcgccttgg attcgggtcg gagcccgccg
     1081 gcaatcgtca atcgtcaatc gtcaatctgc ggtcgccctg actctcctcc gccagcgcat
     1141 gcgccggggc cgggagctcc cagggctttt tgacggccga gtccgcgaag tagcccggca
     1201 gcagcgcggg caggccgaac tgttcttgcg ccacctgcac cagccgttcc ggttcgtacc
     1261 aggccccccg caggatcgcg ctgcgccgca tcgccttggc cttgctgagc gggagatgtc
     1321 ccgagggatc cagacggcgg gccagcgcct tctcatcggc cagcacttcc accgtcgcgt
     1381 cgtaggccgc gcccaggtgc tgctccaggt cctggttggt gagcagccag cggctccgct
     1441 cccgcgccgc ctgcatggcc cgctgccagg tacgggtgtg cgccagatgc accatgccgc
     1501 ggaagatccg gcggttggtg ggcacgctga aaatggtggg cgagatgatc cgctccaggt
     1561 gccggtccgc ctgggcatgg tccatccgga tgatgtcgcg ggccttgcgg gcgtactcgt
     1621 cggtgagatg ggtctcggcc cggatctccc agtagctgtg gcccatcgag cgggtactgc
     1681 tggtgagcag cagctggcgc ggcacgtaaa agttgtgcgc catggtgtcc gccgagagat
     1741 gcgccagata gcccagcccg aacgccttca tcgcgtcgct gggagcgtcg gcgtacacct
     1801 cctggcccac gtgccagaag tgcgagtgcc gcccgggcgg gacgtagcgc ttggcaaacg
     1861 agatgtcggg tgcgatgctg ccgtagagaa aatcgtacgg gaatgcgtgc agcagatcgg
     1921 acacgctggc gggcagcagg tggaggttgg cgagaatggt ctcgcctagc cagatgtgag
     1981 tgcccggggt ccaggcccac gcagaatccg gcagaacaaa gagcgccaca aaaaagacgg
     2041 ccagaacggc tgtaaccgcc ctcgaccgcc ttcgaccctc ttcgaccccc ttcgaccgaa
     2101 acaaggaccg ccttcgaccc ccgtcgaccc ccgtcgaccc ccacctcatc cctcccgcac
     2161 ccgcttcctt cgtcctccgc cgacgaagcg ccggagccgg ctcaccacgc ccaggccgcg
     2221 gcgcaccgat cgcagcttgg cggcgacgtc gagtgccgtc tcttcgatct cctcct
//
LOCUS       DASWKS010000569         4874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1058011, whole genome shotgun sequence.
ACCESSION   DASWKS010000569 DASWKS010000000
VERSION     DASWKS010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4874
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058011"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..861
                     /locus_tag="VGA78_16200"
     CDS             <1..861
                     /locus_tag="VGA78_16200"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX9895473.1"
                     /translation="RKGLTVKEAYLEEGHAEHEANPEREVEALKGWGEAQHAATLKGD
                     YARDLPQWGMAIDLARCTGCQACVTACYAENNIPTVGEQEILKGREMTWIRIERYWEG
                     GEEPSEPVSARFVPMLCQHCANAPCEPVCPVYAAYHTPDGLNGQVYNRCVGTRYCANN
                     CPYKVRYFNWYAYTKKAFPAPLHLQLNPEVTVRARGVMEKCTFCIQRIRGAQHRARLE
                     DRPLDPGDVITACAQACPSGALAFGNVRDSRSPVVALKQDHRAYHVLEDINVRPAVTY
                     LAKVLHETEA"
     gene            864..2207
                     /gene="nrfD"
                     /locus_tag="VGA78_16205"
     CDS             864..2207
                     /gene="nrfD"
                     /locus_tag="VGA78_16205"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX9895474.1"
                     /translation="MTAITHQPHLSTQTHAEVTRDVVATLGPPSRGYLVALFGAIAAF
                     LVGLVTFVFLLKDGLGLAGYVPPGYWLVYITTFVFWVGIGHAGTLISAILFLFRSPWR
                     TAVYRSTEAMTVFAVLTAGLFPIIHIGRQWIFYWLLPYPNQRFLWPNFKSPLIWDVFA
                     IGTYLTVSTTFLVVGLVPDIAAVRDKMTGWRRKLYSICSLGWTGSDNQWRHYTRGYLY
                     LAALATPLVLSVHSVVSWDFAMSIVPGWHGTIFAPYFVAGAIYSGIGMVLTLLVPLRR
                     VLRLEHMITEYHFDNLSKLLLLTGSILFYAYLMEYFIGWYSGNTFEQTTFFRRAFGPM
                     WWAGWSMIICNAFVSQLLWFKKIRTNLTALFVISIFVNIGMWFERFVIIASSLANDYL
                     PYAWGQAAPTWADWGILLGSFGWFFMYFLLFARTFPIVAIQEIKEMIPLPRRRAH"
     gene            2207..2719
                     /locus_tag="VGA78_16210"
     CDS             2207..2719
                     /locus_tag="VGA78_16210"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HEX9895475.1"
                     /translation="MAKKSVPGVLAAFAHIDAAVDAIRALRQAGHRDITVYSASPNHE
                     LEEALGTGSSWVRAFTLFGGLTGCAAGYAMTMWMSHDWPLLVGGKPIGSLPPYVVLMF
                     ELTILLGALSTVAGMILLPQLKNIRGRAFDPRFTDDRIGIFIPAAAGQVGEVRRLLDQ
                     AGAVEVSHEA"
     gene            2709..3296
                     /locus_tag="VGA78_16215"
     CDS             2709..3296
                     /locus_tag="VGA78_16215"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX9895476.1"
                     /translation="MKRDLRVVALVAALGLGGCDFYYDRIPSPDDALKLIPWFDHMIT
                     SPAVHPYEAATLPRNTPRGSVPVDRIEADWQASWDSANYAVGNVVRNPVPEPARTLAK
                     GDTLYQVFCAVCHGSGAAGDGPVGRRVGAPSLLTEKARALSDGHLYSLIRYGRGVMPR
                     YGDKIFLAEDRWAVVNYLRSLQAAAGPAPTPGGND"
     gene            3296..4663
                     /locus_tag="VGA78_16220"
     CDS             3296..4663
                     /locus_tag="VGA78_16220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895477.1"
                     /translation="MPDQELRDRLIEHAVTPGRYAGMFRTGILLAVIGVVLFSIAAVG
                     AGHQRAWQAFHVNWLFFTGLAGGSVALTAVYKLGNAKWTGLILRFSQPAVAFLPISLL
                     GLVAIFTAGYEPIYGHMAEQVHSLQHGKAVWLGHGFMAVRLFLMLGLLFTVGWLLIRA
                     DLVPDLSLARGKVEPSRRALFESWSTGFDETPLARDRQRARINRLAALFIPLYALGFT
                     LVAFDMIMALQPHWFSNLLGGFFFMASFLGGHTLLALMMLYGERQTGIHDLISPKQRH
                     DLGKMIFGFTVFWTYLMWSQYLVIWYGNLPEETGFVFSRLWGSWRPVGAAVATGMFLI
                     PFSGLIGVAPKKSRVTLGLFASISLVALWLERYLLVLPSITAEPGPPAGLPEVGATLL
                     MLGAFLLCYAIFARTFPMVSPRLAEVTLEREVHHAEAEAEFEHDKSPKDYVTEQAIEQ
                     DKHHH"
BASE COUNT          735 a         1625 c         1612 g          902 t
ORIGIN      
        1 cggaagggtc tgacggtcaa ggaggcctac ctcgaggagg ggcacgccga gcacgaggcc
       61 aaccccgagc gcgaggtcga ggccctgaag gggtgggggg aggcgcagca cgcggccacc
      121 ctcaagggcg actacgcgcg cgacctccca cagtggggga tggcgatcga tctcgcccgc
      181 tgcaccggct gccaggcctg cgtcaccgcc tgctatgccg agaacaacat cccgaccgtg
      241 ggagagcagg agatcctcaa gggccgggag atgacctgga tccggatcga gcgctactgg
      301 gagggcgggg aggagcccag cgagccggtc tcggcccgct tcgtcccgat gctgtgccag
      361 cactgcgcca acgcgccgtg cgagccggtc tgtccggtat acgcggcgta tcacacgccc
      421 gacgggctga acggccaggt ctacaaccgt tgcgtgggca cccggtactg cgccaacaac
      481 tgcccctaca aggtccgcta cttcaactgg tacgcctaca ccaagaaagc cttcccggca
      541 ccgctccacc tgcagctcaa cccggaagtc acggtgcgcg cccgcggtgt catggagaag
      601 tgcaccttct gcattcagcg gatccggggt gcccagcacc gggcccggtt ggaagaccgc
      661 ccgctggatc cgggggacgt cattaccgcc tgcgcccagg cctgtccctc gggcgcgctg
      721 gcgttcggca acgtccgcga cagccggagc cccgtggtcg cgctcaagca ggaccaccgg
      781 gcctaccatg ttctggagga catcaacgtg cgtcctgccg tgacttacct ggccaaggtc
      841 ctgcacgaga cggaggcctg accatgacgg cgatcacgca ccagccgcac ctgtcgaccc
      901 agacccacgc cgaggtcacc cgggacgtgg tcgccacgct ggggccgccc agccgggggt
      961 acctggtcgc gctgttcggc gcgatcgcgg cgttcctggt gggtctggtg acattcgtgt
     1021 ttctgctcaa ggacggtttg gggctggccg gctatgtgcc gccggggtac tggctggtgt
     1081 acatcaccac gttcgtcttc tgggtcggca tcgggcacgc cgggaccctg atctcggcga
     1141 ttctgttcct gttccgctcg ccctggcgca ccgcggtcta ccgctccacc gaggcgatga
     1201 ccgtgttcgc ggtgttgacc gccgggttgt ttccgatcat ccatatcggg cggcagtgga
     1261 tcttctactg gctgctgccc tacccgaacc agcggtttct gtggcccaat ttcaaatcgc
     1321 cgctgatctg ggacgtcttc gcgatcggga cctatctgac ggtctcgacc acgttcctgg
     1381 tggtggggct ggttcccgac atcgcggcgg tgcgcgacaa gatgaccggg tggcggcgca
     1441 agctctattc gatctgttcg ctgggctgga ccgggtccga caatcagtgg cgccactaca
     1501 cccgcggcta cctctatctg gccgcgctgg ccaccccgct ggtgctctcg gtccactcgg
     1561 tggtgtcgtg ggacttcgcc atgtcgatcg tgccgggatg gcacgggacc atcttcgcgc
     1621 cctatttcgt ggccggggcc atctactccg gcatcgggat ggtgctcacg ctcctggtgc
     1681 cgctccgccg ggtgctccgg ctggagcaca tgatcaccga ataccacttc gacaacctgt
     1741 cgaagttgct gctgctgacc ggctcgatcc tgttctacgc ctacctgatg gagtatttca
     1801 tcggctggta cagcgggaac accttcgagc agaccacgtt cttccgccgg gccttcgggc
     1861 cgatgtggtg ggccggctgg agcatgatca tctgcaacgc cttcgtgtcg cagctgctct
     1921 ggttcaagaa gatccgtacc aatctcaccg cgctgttcgt gatctcgatc ttcgtcaaca
     1981 tcggcatgtg gttcgaacgg ttcgtgatca tcgcctcgag cctggccaac gactacctcc
     2041 cctacgcctg gggccaggcg gcgcccacct gggccgactg gggcatcctg ctgggctcgt
     2101 tcggctggtt cttcatgtat ttcctgctgt tcgcgcgcac cttcccgatc gtcgccatcc
     2161 aggagatcaa ggagatgatc ccgctgccca ggcggagggc gcactgatgg cgaagaaatc
     2221 ggtgcccggc gtgctggcgg cgttcgccca tatcgacgcg gcagtcgacg cgatccgcgc
     2281 gctgcgccag gcgggtcacc gggacatcac ggtgtactcc gcgtccccga accacgagct
     2341 cgaggaagcc ctgggaaccg gcagcagctg ggtccgggcc ttcaccctgt ttggcgggct
     2401 gaccggctgt gccgccggat acgccatgac gatgtggatg tcccatgact ggccgctgct
     2461 ggtcggcggc aagcccatcg gctcgctgcc gccctatgtc gtcctcatgt tcgagctgac
     2521 catcctcctg ggcgcgctca gcaccgtggc cgggatgatc ctgctgccgc agctcaagaa
     2581 cattcgggga cgcgccttcg atccccgttt caccgacgac cggatcggaa tcttcattcc
     2641 ggcggcggcc gggcaggtgg gcgaggttcg ccggttgctg gaccaggcag gtgcggtgga
     2701 ggtgagccat gaagcgtgac ctccgcgtcg tcgccctggt cgcggctctg gggctgggtg
     2761 gttgcgattt ctattacgac cgcatcccgt cgcccgacga cgccctcaag ctcatcccct
     2821 ggttcgacca catgattacg tccccggcgg tgcaccccta tgaggccgcc actttgccgc
     2881 gcaacacccc acggggcagc gtgccggtcg atcggatcga ggccgattgg caggccagtt
     2941 gggactccgc caactacgcc gtgggcaacg tggtccgcaa tcccgtgccc gaaccggcgc
     3001 ggaccctggc aaagggcgac acgctctacc aggtcttctg cgccgtgtgc cacggcagcg
     3061 gggctgccgg cgacgggccc gtcggccgcc gggtgggcgc gccctccctg ctgacggaga
     3121 aagcccgggc tctgtcggac gggcacctct acagcctgat ccggtatggc cggggcgtca
     3181 tgccccgcta cggtgacaag attttcctgg ccgaggatcg gtgggccgtg gtcaactacc
     3241 tgcggagcct gcaagccgct gccggcccgg cgccgacccc gggaggaaac gactgatgcc
     3301 cgatcaggaa ctgcgggacc gtctgatcga gcacgcggtc actcccggcc gctacgccgg
     3361 catgttccgc accgggattc tgctcgcggt catcggcgtg gtgttgttct cgatcgcggc
     3421 cgtgggggcg gggcaccagc gggcctggca ggcgttccac gtcaactggc tgttcttcac
     3481 cgggctggcc ggcggcagtg tggcgctgac cgcggtctac aagctgggga acgccaagtg
     3541 gaccggcctg atcctccgct tctcccaacc ggcggtggcg ttccttccga tttcgctgct
     3601 gggtctggtc gcgatcttca ctgccggcta cgagccgatc tacggccaca tggcggagca
     3661 ggtccactcg ctgcagcacg gcaaggccgt gtggctggga cacgggttca tggccgtgcg
     3721 gctgttcctg atgttggggc tcctcttcac cgtgggctgg ctgttgatcc gggccgacct
     3781 ggtgcctgac ctgtccctgg ctcggggcaa agtggagccg agccgacggg cgctgttcga
     3841 gtcgtggagc acggggttcg atgagacacc cctggccaga gaccggcagc gggcccggat
     3901 caaccggctg gccgcgctgt tcatcccgct gtacgcgctc gggttcacgc tggtggcctt
     3961 cgacatgatc atggcgctcc agccccactg gttctcgaac ctgctgggcg gattcttctt
     4021 tatggcatcg ttcctggggg gccacaccct tttggctctc atgatgctgt acggagaacg
     4081 tcagaccggg atccatgacc tgatcagccc gaagcagcgt cacgacctgg gcaagatgat
     4141 cttcggcttt accgtgttct ggacctacct catgtggagc cagtatctgg tcatctggta
     4201 cggcaacctc ccggaggaaa ccggcttcgt gttctcccgg ctgtgggggt cctggcgtcc
     4261 agtgggtgca gctgtggcca ccggtatgtt cctcattccg ttctcgggac tgatcggcgt
     4321 ggcgcccaag aagagccggg tgacgctggg cctgttcgcc tcgatcagcc tggtggcgct
     4381 ctggctggag cggtatctgc tggtgctgcc ttcgatcacc gccgagcccg ggccgccggc
     4441 cgggttgccc gaggtcggtg ccacgctgct gatgctgggc gcgttcctgc tgtgctacgc
     4501 aatctttgcg cggaccttcc cgatggtgtc ccctcggctg gcggaagtta ccctggagcg
     4561 cgaggtgcac cacgccgagg ccgaggccga gttcgagcac gacaagtcgc ccaaggacta
     4621 tgtgaccgag caggcgatcg agcaggacaa gcaccaccac tagtccgggg acgggccgga
     4681 aaatcggagc gccgtgatcc agcccatgga ccacggcgct cgagcgtcag ggggcaaggc
     4741 cgattacttg agcacgactc ccgcggccag cgcattcagg gaatccggcg acagacggcc
     4801 cacgaccgca atcacccggc tggtccgctg cacgtacccg tccacatcga catagtcggg
     4861 cagcgaacgc gacg
//
LOCUS       DASWKS010000570         2370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2181445, whole genome shotgun sequence.
ACCESSION   DASWKS010000570 DASWKS010000000
VERSION     DASWKS010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2181445"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1377
                     /locus_tag="VGA78_16225"
     CDS             <1..1377
                     /locus_tag="VGA78_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895478.1"
                     /translation="NDARIVYWNGASWTELDRILFNDGPAGQVSSTWNQASTTLFFKT
                     VAGISASGSDTGYYLYYGNPLAGSPPTNTPSSRYFMAESLGETTTTSATYATKLQLQF
                     TPSTASEHWVVAATWRQREIGSLGTTVSGGYGRISVNGSPRTGTNDITFRQSGDVWKS
                     FQAFLKVTGTTAQQTISIDHAWNGGGTDAIDNARIVAFLLPDPSSANIQYSEALAVTT
                     DFVNPTNSLTTTFSPTSAGEYVWMANGFVHEGPGGGSNGGLFAIDETAATQQNSAESY
                     TGVGSGFVPLLHFERRTLTTGSNTFTIRHQPDDPTGGERQGLTQLLFRADVFEAVELA
                     SSTGLSSTTSTSPVTKNTLTTAAPAARDYVYLVVMGLDDPVQNVALSTFGDIRLGGTT
                     MLADEIAIDRAGYDSQIGWAYAENVSGGRIVEARFWAESGNTSEARWSHILALRYKEP
                     GTSLGAEE"
     gene            1417..>2370
                     /locus_tag="VGA78_16230"
     CDS             1417..>2370
                     /locus_tag="VGA78_16230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895479.1"
                     /translation="MKSETRFTQLREAAVKAARPSKAREQEEQKAELRELLRWLLLVP
                     LIFLALFGCGWMATLGLPVASADTRSLLNADYSPWSFEVIQPVNPDIIEEIQQDQILY
                     PSTFSEPVAPTIISAPFWPTPTPTPTPTAGPTLTPSPSLTASASPTLGTPTASLTASP
                     TLTASSSATPTRTPTPSGPPSPIPPAVPPANTYWFYDDTAPVTYMMYSSSPSGIYRGD
                     ASVAFHSPTFSGGQVLAAGTTTVNFYAWNPSPSVALFSVQLSAGGVPLGSGSFALPPN
                     TWDAYFFSASFATAAHSFTSGERLQVNFSFGGSAEMYWDGAY"
BASE COUNT          430 a          875 c          657 g          408 t
ORIGIN      
        1 aacgacgccc ggatcgtcta ctggaacggc gccagctgga ccgagctgga tcgaatcctc
       61 ttcaacgatg gtcccgccgg ccaggtcagc tcgacctgga accaggccag taccaccctg
      121 ttcttcaaga ccgtggccgg catttccgcc agcggatccg acaccggcta ctacctgtac
      181 tacggcaacc cgctagccgg cagcccgccc acgaacacac cgtcctcgcg ctacttcatg
      241 gccgagagcc ttggtgaaac caccacgact agcgcgacct acgcgaccaa gcttcagctg
      301 cagttcacgc caagcaccgc ctccgagcac tgggtggtcg cggcgacctg gcgccagcgt
      361 gaaatcggaa gcctgggcac gactgtctcc ggaggctacg gaaggatctc cgttaacggc
      421 tcgccacgga ccggcaccaa tgacatcacc ttccgccagt cgggggacgt ctggaagtct
      481 tttcaggcgt tcctgaaagt aaccgggacc accgcccagc agacaatctc aattgaccac
      541 gcctggaacg gcggtggcac cgacgccatc gacaatgccc ggatcgtggc cttcctgctc
      601 cctgacccga gcagcgccaa tattcaatac agcgaagcgc tggcggtgac gaccgacttc
      661 gtgaatccca ccaattcctt gactaccacg ttctccccta ctagcgcggg agagtacgtc
      721 tggatggcca atggatttgt ccacgaaggc ccgggcggtg gttccaacgg cgggctattt
      781 gccatcgatg agaccgctgc gacccagcag aactcggccg agtcttatac cggggtgggt
      841 tcaggctttg tgccccttct gcacttcgag cgccgcaccc tcaccaccgg cagcaatacc
      901 tttaccatcc ggcaccagcc cgacgatccc accggcggcg aacgccaggg gctcactcag
      961 ctgctcttcc gcgcggacgt cttcgaggca gtggaactgg ccagttccac cggcctgagc
     1021 agcaccacca gcaccagccc ggtcaccaag aacactctga ccaccgccgc tccggcagct
     1081 cgcgactacg tttatctggt cgtgatggga ctggacgacc cggtccaaaa tgttgctctc
     1141 tcgaccttcg gcgatatccg gctcggcggc acaacgatgt tggcggacga gatcgcgatc
     1201 gatcgcgccg ggtacgactc tcagatcggc tgggcctacg ccgagaatgt gtcgggtggc
     1261 cggattgtgg aggctcgctt ctgggccgag tcgggaaata catcggaagc ccgttggtcc
     1321 catatcctag ccttgcgtta caaggagccc gggaccagcc tgggggcgga agaatgatcg
     1381 agtgcaaatg atcgggtccg tcaggtgtct cgaacgatga agtctgagac tcggttcacc
     1441 cagcttcggg aggccgcggt caaggccgcc cgcccgagca aggcccgcga gcaggaagag
     1501 cagaaggccg agctgcgcga gctcttgcgc tggctgctgc tggtcccgct gatcttcctg
     1561 gccttgtttg gctgcggctg gatggccacc ctgggtctgc cggtcgccag tgccgatacc
     1621 cgctcgctgc tcaacgccga ctacagcccc tggagcttcg aagtcattca gccagtcaac
     1681 ccggacatca ttgaagagat ccagcaagac cagatcctct accccagcac tttcagcgag
     1741 ccggtggcgc ccaccatcat ctcggctccc ttctggccca cccccacgcc cactccgacg
     1801 cccaccgccg gtccgaccct cacccccagc ccgagcctca ccgcctcggc ctcgcccacc
     1861 ctgggaacgc ccaccgccag cctgaccgcc agtccgacgc tcaccgccag ctcgtccgct
     1921 acgcccaccc gcacgcccac cccctccggc ccgcccagcc cgatcccacc ggccgtgccg
     1981 ccagcgaata cctattggtt ctacgacgac accgctccgg tgacctacat gatgtactcc
     2041 agctcgccca gcggcatcta ccgaggcgac gcctcagttg ccttccattc gcccaccttc
     2101 tccggcggcc aggtgctggc cgccggcacc accaccgtca acttctatgc ctggaacccg
     2161 tcgccctcgg tcgccctctt cagcgtccaa ttgtcggccg gaggcgtgcc gctcgggtcc
     2221 ggcagttttg ccctcccgcc caacacctgg gacgcctact tcttctcggc ctccttcgcc
     2281 accgccgccc acagcttcac cagcggcgag cggctgcagg tcaatttcag cttcggcgga
     2341 tcggccgaga tgtactggga cggtgcctac
//
LOCUS       DASWKS010000571         4156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1809889, whole genome shotgun sequence.
ACCESSION   DASWKS010000571 DASWKS010000000
VERSION     DASWKS010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809889"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VGA78_16235"
     CDS             <1..490
                     /locus_tag="VGA78_16235"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9895480.1"
                     /translation="LCAAASAAAQTPSDPASAGLRELYTSNRRVVIAAAEQMPEADYG
                     FKATAEVRSFGQLIGHITNAQLNFCSAALGAARPNRQDWEKTVAKAELVQALKDSFAF
                     CDGAYEKLTDASGAEIVKVFGAERARSFPLIYNLAHNNEHYGNIVTYLRLKGMVPPSS
                     QR"
     gene            complement(491..3112)
                     /locus_tag="VGA78_16240"
     CDS             complement(491..3112)
                     /locus_tag="VGA78_16240"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895481.1"
                     /translation="MAWLRRLRVGLRGVLRRTRVEAELDEELEFHFEREVEEQLRLGR
                     SEAEARRLARLAIPGVASIKDECRDQRDWMRLQRLLADLRLGVRVLSRSPVFAIVTVT
                     VLALGIGAATAVFSLLNGVLLRPLPYPDPDRLIRIFETAPMSQGGEIRSVANPTVADW
                     IARTRAFEGIAAYGPWSVDLTGGDRPEQLPAAMGSARLFRLLGVGPQLGRLFAPDEEL
                     PGGPRAVLLSHPLWRDRYGADPALVGKSILLNRQPFTVIGVMPSGFDFPAGALLWSSL
                     AVDHEFDARQARHLSVLARLAPGVTIEAAEADLLAAERDLAGQFPRNYTGFGVGLIAL
                     KERMVGEARPMLMALFGAVSFFLLIACANVANLLLARAVAREREVAVRLALGASRSRL
                     VQQFLVEFLLLFGAATALGLLAASWVVGMVRAVGPADIPRLDGVSMDLEVAACAILTV
                     LITGLLFGLIPALRGSNPDLIRSLKSAGALGATRTKSLRLRGGLTVAETAIATTLLVG
                     AGLLVRSLDRLARVDAGLPLEGLLTFHIGLPPERAQDNAFVVSFFQQVRERLEAIPEV
                     VASGMTSRLPLSGSDHSTSFRLEGDAADPGSERSAQDRAVTPGYFRALGIPVLRGREF
                     TEDDRPDGVPVVMVNQGFARRFFPGADPVGQSLLMGGRRVIVGVVGDTRQFSLDLPAE
                     PELYMPHAQRPWPWLSVAVRTRSDPRGIVNAVRQAVASLDPDMPVTAVRTIDELASAG
                     IAQRRLLSQVLGGFAGAAFLLAALGLYGVIAYQVTLRVPEIGVRMAFGATRTEVIRLV
                     LLRGARLLAAGTLIGLIAALLLAGSLRRFLFETTPADPLTYAAIAGLLMVVGLAACVI
                     PARRAAGTDPVSAMRAE"
     gene            complement(3123..3455)
                     /locus_tag="VGA78_16245"
     CDS             complement(3123..3455)
                     /locus_tag="VGA78_16245"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX9895482.1"
                     /translation="MGTHHSELLRDTLDLLILKLLAQRPLHGWAVQSQLRLVSQSALQ
                     VGPGSLYPALHRLEHRGWISAEWQLTERKRRAKVYRLTPAGRRQLERETKGWRRLVHA
                     VDLILERS"
     gene            complement(3563..3868)
                     /locus_tag="VGA78_16250"
     CDS             complement(3563..3868)
                     /locus_tag="VGA78_16250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895483.1"
                     /translation="MRAQAGQSSGAIEIPIAIAHNYGNTARSEALYLSDLGGFTNLEL
                     LELWSESTPSLIFPGRKLGLLRDGYEASFVVLEQDPLADFSNVQRVTRRVKQGRLLH"
     gene            3951..>4156
                     /locus_tag="VGA78_16255"
     CDS             3951..>4156
                     /locus_tag="VGA78_16255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895484.1"
                     /translation="MAWKRRAGGAGIQRARAVRDVARQPSSPRADGGRRRGDRRTCGE
                     PLRRVGASAVTARGAGPAYGAAAHA"
BASE COUNT          710 a         1468 c         1406 g          572 t
ORIGIN      
        1 gctctgtgcc gccgcctccg ctgccgccca gaccccgtcc gacccggcct cggccggcct
       61 gcgcgagctc tacacctcca accggcgggt ggtgatcgcg gccgccgaac agatgcccga
      121 ggccgactac ggcttcaagg cgacggccga ggtccggagc ttcggccagc tgatcggcca
      181 catcaccaac gcccaactca acttctgttc cgcagccttg ggcgcggccc gacccaaccg
      241 gcaggactgg gagaaaaccg tcgccaaggc cgagctggtg caagccctca aggacagctt
      301 tgcgttctgc gacggagcct atgagaaact gaccgatgcg tcgggggcgg agattgtgaa
      361 ggtgttcggg gccgagcggg cccgatcgtt ccccttgatt tacaacctgg cgcataacaa
      421 cgaacactac ggcaacatcg tgacctacct gcgcctcaag gggatggtgc cgccgtcgtc
      481 ccagcggtag tcattcggcc cgcatcgcgc tgaccggatc ggttccagcg gcccggcggg
      541 cgggaatcac gcaggccgcg agacccacca ccatgaggag gccagcgatc gcggcgtacg
      601 tgagcggatc cgccggcgtc gtctcgaaca gaaaccgccg cagcgagccg gccagcaaca
      661 atgcagctat cagcccgatc agggtcccgg cggccaggag gcgtgccccc cgcagcagga
      721 ccagccggat cacctccgtg cgggtagcac cgaacgccat ccggaccccg atctcgggca
      781 cccgcagggt gacctgatag gcgatcacgc cgtacaatcc cagcgcggcc aggaggaagg
      841 ccgccccggc gaacccaccc agtacctggc tcaacagccg gcgctgggcg atgccggccg
      901 aggccagctc gtcaatagtg cgcaccgccg tcacgggcat gtccggatcg agtgacgcaa
      961 cagcctgccg aacggcgttc acgatccccc gtggatcgga ccgcgtccgg accgccacac
     1021 tgagccatgg ccaggggcgt tgggcgtgcg gcatgtagag ttccggctca gccggcagat
     1081 cgagcgagaa ttgtctggta tcgcccacca cgccgacgat gacgcggcgc ccgcccatca
     1141 gcagcgactg gcccaccggg tcggcgcccg ggaaaaaccg ccgggcgaag ccctggttca
     1201 ccatgacaac tggaacccca tcgggacggt cgtcctcggt gaattcgcgg ccccgtagca
     1261 cggggatgcc caaggcgcgg aagtagcccg gcgtgaccgc ccggtcctgg gcgctccgct
     1321 cggatccggg atcggcggca tcgccttcca gccgaaagga cgtgctgtga tcggacccgc
     1381 tcaagggcaa ccgggaggtc atgccggagg ccaccacctc cgggatcgcc tccagccgct
     1441 cccttacctg ctggaagaag gacacgacga aggcattgtc ctgggcccgc tcgggcggga
     1501 gaccgatgtg gaaggtgagc agcccttcga gcggaagacc cgcatcgacc cgagccagcc
     1561 ggtcgagact ccggaccagc agtccagcgc ccaccagcag cgtggtcgcg atcgcggtct
     1621 cggccacggt caggccgccc cggagtcgga gactcttggt gcgcgtcgct ccgagggcgc
     1681 cggcgctctt gagagaccgg atcaggtcag gattcgagcc tcgcaacgcc gggatcagac
     1741 cgaacaggag tccggtgatg aggaccgtca ggatggcaca ggcggccacc tcgagatcca
     1801 tgctgacccc gtccagccgc gggatgtcgg ccggccccac ggcgcgcacc atgccgacga
     1861 cccaggacgc ggccagcaag cccagcgcag tcgccgctcc gaagagcagc aggaactcca
     1921 ccaggaactg ctgtaccaga cgggaccggc tggcgcctaa cgccaggcga accgcgactt
     1981 cccgttcccg cgccaccgcc cgagccagga gcaggttggc cacgttggcg cacgcgatca
     2041 gcagaaagaa gctgaccgcg ccgaagagcg ccatcagcat gggccgcgcc tctcccacca
     2101 tccgttcctt gagcgcgatc agcccgaccc cgaagccggt gtagttccgc gggaactggc
     2161 cggccaggtc acgctcggcg gccagcagat ccgcctcggc cgcttcgatc gtgactcctg
     2221 gagcgagccg ggccagcacg ctcagatgcc tggcttgccg ggcgtcgaac tcgtgatcca
     2281 ctgccagcga ggaccagagc agcgccccgg ccgggaagtc gaatcccgag ggcatgacgc
     2341 cgatgaccgt gaacggctgc cggttgagca ggatgctctt tcccaccagg gccggatcgg
     2401 cgccgtagcg atcgcgccag agcgggtgac tgagcaggac ggcacgaggg ccccccggaa
     2461 gctcctcgtc cggagcgaag agccggccca gctggggccc gacgcccagg agccggaaca
     2521 gccgggccga ccccatcgcc gctggcagct gctccggccg gtcacctccg gtcaggtcca
     2581 cgctccaggg gccgtaggcg gctattccct cgaaggcccg ggtccgagcg atccagtcgg
     2641 cgaccgtggg gttggccacg ctccggatct cgccgccctg gctcataggc gccgtctcga
     2701 aaatccggat cagtcggtca gggtcgggat acggcagcgg acggagcagc acgccgttga
     2761 ggaggctgaa gaccgccgtg gcggcaccga tgcccagggc caggaccgtc acggtgacga
     2821 tggcgaacac cggcgagcga ctcaaaaccc tcacgccgag gcgaagatca gccagaagcc
     2881 gttgcagcct catccagtcc cgctgatcgc ggcactcgtc cttgatcgag gccactcccg
     2941 gtatcgccag gcgtgccagc cggcgtgctt ccgcctcgct ccggccgagc cggagctgtt
     3001 cctccacctc ccgctcgaaa tgaaactcca gctcctcatc cagctcggcc tcgactcggg
     3061 tgcgccgtag caccccgcga agcccgaccc gcagccgtcg cagccatgcc atgggtgcct
     3121 cctcacgacc gctcgagaat cagatccacg gcgtgaacca gacgacgcca tcctttggtt
     3181 tcccgttcca gctgtcgccg tcccgccggg gtgaggcgat acaccttggc ccgccgcttc
     3241 cgctcagtga gctgccactc ggcgctgatc cagccgcggt gctccagccg gtggagcgcg
     3301 ggatagaggg agccgggtcc cacctggagc gcgctttggg agaccagccg cagctggctc
     3361 tggacggccc acccgtgcag ggggcgctgc gccagcagct tgagaatcag gagatcgagt
     3421 gtatcccgga gtagctcgct gtggtgggtc cccatgttcc actcgggttt cgatatatcg
     3481 gattccgata ataggtcgcg ttcctgaccc ggtcaagccg gccacctccc gcctatccgc
     3541 ctgcccgccc gtccgcctca gactagtgga gaagccggcc ttgcttcacc cgccgggtga
     3601 cacgctggac gttcgagaag tcagccagcg gatcctgctc caggaccacg aagctcgcct
     3661 cgtagccgtc gcggagcagt ccgagcttcc gcccggggaa gatgagcgac ggcgtactct
     3721 cgctccagag ctcgagcagc tcgaggttgg tgaacccgcc gagatcgctc aggtacaggg
     3781 cctcgctccg ggcggtgttg ccgtagttgt gggcgatggc gataggaatt tcaattgccc
     3841 cgcttgattg ccccgcttga gcgcgcaacg cgtttgggcg accggtcggt gcgagcgcgg
     3901 cgggcggcgg tgcggccgca gtcggttgcc gcgagtgact ggtcggggcc gtggcgtgga
     3961 agcggcgggc gggcggagcc ggaatccagc gcgcccgtgc ggtgcgcgat gtggccaggc
     4021 agcccagcag tccccgcgcc gacggcgggc ggcggcgggg cgatcggcga acgtgcgggg
     4081 aacctcttag gcgggttggc gcgtcggccg tgacggcgcg aggcgcgggc ccggcgtacg
     4141 gcgcggcggc tcacgc
//
LOCUS       DASWKS010000572         6019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1417129, whole genome shotgun sequence.
ACCESSION   DASWKS010000572 DASWKS010000000
VERSION     DASWKS010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417129"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4131
                     /locus_tag="VGA78_16260"
     CDS             <1..4131
                     /locus_tag="VGA78_16260"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9895485.1"
                     /translation="FASEVTRVAREVGTEGRLGGQAVVPGVAGTWKDLTDGVNSMASN
                     LTAQVRNIAEVTTAVARGDLSRKITVDVRGEILELKDTINTMVDQLNAFAFEVTRVAR
                     EVGTEGKLGGQAQVPGVAGTWKDLTDNVNSMASNLTGQVRNIAEVATAIANGDLSRKI
                     TVDVRGELLNLKETMNTMVEQLRSFAAEVTRVAREVGTDGKLGGQAVVSGVAGTWKDL
                     TDNVNLLAANLTTQVRNIAEVTTAVARGDLSRKITVDVKGEILELKVTINTMVDQLNA
                     FAAEVTRVAREVGTEGKLGGQATVPGVAGTWKDLTDNVNVMAANLTEQVRGIVKVVTA
                     VANGDLSQKLTVNAKGEVAALAETINNMTGTLATFAEQVTTVAREVGVEGRLGGQANV
                     PGAAGTWKALTGNVNLLAANLTTQVRAIAKVATAVTQGDLTRSIEVEARGEVAELKDN
                     INTMINNLRLTTDRNTEQDWLKTNLARFNSMLQGQRDLATVGRMLLSELVPLVNAHQG
                     VIYQVGGEDRPSLGLLASYADGHDHKHPQHLELGESFFGQCAVDKRRILVTRIPPDVV
                     RIGSVFVQALPRSIVVFPVVFEGEIKAVLGLASLTDFTPSHLAFLEQLTTSIGIVLNS
                     IEATMRTEDLLKQSQQLAAELQNQKRELQQTNEQLAQKAQQLAEQNAEVERKNQEIEQ
                     ARRAVEEKASELALTSKYKSEFLANMSHELRTPLNSILILGQQLAENSDGNLAPRQVE
                     FARTIHGAGTDLLNLITDILDLSKIESGTVTIMAEEVEVATLVDAVARPFRHEAENRR
                     LSLDLEIDAALPRAMVTDVKRLQQVLKNLFSNAFKFTEQGGVRLRVARADVGWSSGHP
                     VLSRAGGVVAFEVADTGIGISPDKQRIIFEAFQQADAGTSRKYGGTGLGLAISRELTT
                     LLGGEIQVRSTPGLGSTFTLYLPLRYIGPAGGAAVAESDAKAGRTTASFPAFRVAVRA
                     SEQIPDDRDDLEGSAAVLLIVEDDPHYARVLVDLARAQGFKVLVATRGSDALDLARRF
                     RPTAISLDVFLPDMLGWAVLNQLKQDPALRHIPVQIVTLDENRQHGLSRGAFGFVPKP
                     TTTEGLEAALARIKGYATPRRKRLLVIEDDEAEQQSIRALLGHEDVEIETATTGQGAL
                     AALREQPYDCAVLDLRLPDMTGFDVLETIRDDQALSDLPVVVFTGKELSPEEDSRLHT
                     LARSVVVKGVESPERLLDETALFLHRLVADLPVEKQRMLDRLHRSDDDLVGKKVLVVD
                     DDARNIFALSSVLERRGMEVLTAGTGHEAIDLLYGTEGVAIVLMDIMMPDMDGYQTVQ
                     AIRQKPGLGRLPIIALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRLWLHR"
     gene            4145..5767
                     /locus_tag="VGA78_16265"
     CDS             4145..5767
                     /locus_tag="VGA78_16265"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9895486.1"
                     /translation="MTNADPVNILLVDDQPGKLLSYEAILAPLGDRLISAGSGREALR
                     LLLKHEIAVVLMDVSMPDLGGFELAEIIREHPRFQKTAIIFVSAVHMSDLDRLKGYES
                     GAVDYVAVPVVPQLLRAKVGVFAELYRKTRESERLNRELERRVAERTAELEASMARQI
                     ELSERLREADRRKDHFLALLAHELRNPLAPVSNAVGIMRRKTIEDPDLVWCRDVIARQ
                     TNQLTRLVDDLLDVSRITLGKIKLRLETVDLAAVIAGAVETSRPLIDRRRHRLCITQP
                     DRRVRMVGDQARLTQVVANLLNNAATYQNEGGQIDLIASERENDALITVRDQGIGIAP
                     EALVDLFELFSQGERSPDSLHGGLGIGLSLVKTLVEMHGGTVSAASEGPGRGSEFVVR
                     LPCAPAEPGRLEENGFSSSAMLEGPPRRILVVDDSRDAAETLALLLTLSGHEVLVAHD
                     GPGALALAVAERPTVVLLDIGLPGMDGYEVCRRAREQGLRDTTIIAMSGYGQDRDRQR
                     SSEAGFDGHTVKPVAISELTALLAKASLHSRS"
     gene            complement(5776..>6019)
                     /locus_tag="VGA78_16270"
     CDS             complement(5776..>6019)
                     /locus_tag="VGA78_16270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895487.1"
                     /translation="AETKDGGGQTMRTLRTALLAAVVSAGLLGCRRDRQTETPASASA
                     LLVAPPIVVSTPTSTSISLPVTSKARRAPKPRGRIG"
BASE COUNT         1063 a         1966 c         2113 g          877 t
ORIGIN      
        1 ttcgcctcgg aggtgacccg ggtggcccgc gaagtgggca ccgagggccg gctgggcggg
       61 caggcggtgg tgccgggggt cgccggcacc tggaaggacc tcaccgacgg cgtcaactcg
      121 atggcgagca acctgaccgc ccaggtccgc aacatcgccg aggtcaccac cgcggtggcc
      181 cggggcgacc tgtcgcgcaa gatcacggtg gatgtgcggg gcgaaatcct cgagctcaag
      241 gacaccatca acaccatggt ggatcagctc aacgccttcg ccttcgaggt cacccgggtg
      301 gcccgcgagg tcggcaccga aggcaagctg ggcggccagg cccaggtgcc gggcgtggcg
      361 ggcacctgga aggacctgac cgacaacgtg aactcgatgg ccagcaatct caccggccag
      421 gtgcgcaaca tcgccgaggt ggccaccgcc atcgccaacg gcgacctgtc gcgcaagatc
      481 acggtggatg tgcggggcga gctgctcaat ctcaaagaga ccatgaacac catggtggag
      541 cagctgcgct cgttcgcggc ggaagtcacc cgggtggcgc gcgaagtggg taccgacggc
      601 aaactgggcg gtcaggcggt ggtgtccggc gtggcgggaa cctggaaaga cctgaccgac
      661 aacgtcaacc tgctcgcagc caacctcacc acccaggtcc ggaacatcgc cgaagtcacc
      721 accgcggtcg cccggggcga cctgtcgcgc aagatcacgg tggacgtgaa gggcgagatc
      781 ctggagctca aggtcaccat caacaccatg gtggaccagc tcaacgcctt tgccgccgag
      841 gtgacccggg tggcgcgcga ggtgggcacc gaaggcaagc tgggcggcca ggccacggtg
      901 ccgggcgtgg ccgggacctg gaaggacctc accgacaacg tgaacgtgat ggccgccaac
      961 ctgaccgaac aggtgcgcgg catcgtcaag gtcgtcaccg ccgtggccaa cggcgacctg
     1021 agccagaaac tcaccgtcaa tgccaagggc gaagtcgcgg ccctggcgga aaccatcaac
     1081 aacatgaccg gaacgctggc caccttcgcg gagcaggtga ccaccgtggc gcgggaagta
     1141 ggcgtggaag ggcgcctcgg cgggcaggcc aacgtgccgg gcgccgccgg cacctggaag
     1201 gccctgaccg gcaacgtgaa cctgctggcg gccaacctca ccactcaggt acgggccatc
     1261 gccaaggtcg ccaccgcggt gacccagggc gacctgaccc ggtcgatcga ggtggaagcc
     1321 cggggcgagg tggccgagct caaggacaac atcaacacga tgatcaacaa cctgcggctc
     1381 accaccgacc gcaacaccga acaggactgg ctcaagacca acctcgccag attcaacagc
     1441 atgctgcagg ggcagcggga cctggcgacc gtgggacgga tgttgctgtc ggagctggtg
     1501 ccgctggtca acgcgcatca gggcgtgatc tatcaggtcg gcggggagga ccgcccgtcg
     1561 ctgggcctgc tggcgtccta cgccgatggc cacgaccaca agcaccccca gcacctggag
     1621 ctgggcgagt ccttcttcgg gcagtgcgcg gtggacaagc ggcggattct ggtgacccgg
     1681 atccccccgg acgtggtccg catcggatcg gtcttcgtgc aggccctccc ccgcagcatc
     1741 gtggtgttcc cggtggtgtt cgagggcgag atcaaggcgg tgctcgggct cgcctcgctg
     1801 accgacttca cgccgtcgca tctggcattt ctggagcagc tgaccaccag catcggcatc
     1861 gtgctcaaca gcatcgaagc caccatgcgg accgaggatc tgctcaagca gtcgcagcag
     1921 ctggcggccg agctgcagaa tcagaagcgg gagctgcagc agaccaacga gcagctggcg
     1981 cagaaggccc agcagctggc cgagcagaat gccgaagtgg agcggaagaa ccaggagatc
     2041 gagcaggccc gccgcgcggt cgaggagaaa gcctccgagc tggccctcac ctccaagtac
     2101 aagtccgaat tcctggccaa catgtcgcac gagctgcgga cgccgctcaa cagcattctg
     2161 atcctgggcc agcagctggc ggagaattcg gacggcaacc tggcgccccg acaagtggag
     2221 tttgcccgga ccatccacgg ggccgggacc gacctcctca atctgatcac cgacatcctc
     2281 gacctctcca agatcgaatc gggaacggtg acgatcatgg ccgaagaagt ggaggtggcg
     2341 accctggtgg acgcggtggc ccgtcccttc cggcacgagg ccgagaaccg gcgtctgtcg
     2401 ctggacctgg aaatcgacgc ggccctgccc cgtgccatgg tgaccgatgt caagcggctg
     2461 caacaggtcc tcaagaacct gttctccaac gcattcaagt tcaccgagca gggcggagtc
     2521 cggctgcggg tggcgcgggc cgatgtcggc tggagctcgg ggcatccggt gctctcccgc
     2581 gcgggcgggg tggtggcctt cgaggtggcc gacaccggca tcgggatttc tcccgacaag
     2641 cagcgcatca tcttcgaggc cttccagcag gccgacgccg gcaccagccg caagtacggc
     2701 ggaaccggcc tcggcctggc catcagccgg gagctgacca cgctgttagg cggagaaatc
     2761 caggtgcgca gcacgcccgg gctgggcagc accttcaccc tctacctgcc cctgcgctac
     2821 atcggccccg ccggcggcgc ggcggtggcg gagagcgacg ccaaggccgg tcggaccacg
     2881 gcgtcgttcc cggccttccg cgtggccgta cgggccagcg agcagatccc ggacgaccgg
     2941 gacgacctcg agggttccgc cgctgtgctg ttgatcgtgg aggacgaccc ccattatgcc
     3001 cgggtgctgg tggatctggc ccgggcccag ggcttcaagg tgctggtggc cacccggggg
     3061 agtgatgccc tcgacctggc ccggaggttc cgccccaccg ccatttcgct ggatgttttc
     3121 ctgcccgaca tgctggggtg ggccgtcttg aaccagctca agcaggaccc ggcgctgcgc
     3181 cacataccgg tccagatcgt cacgctggac gagaaccggc agcacgggct ctcgcgcggg
     3241 gcgttcggct tcgtgcccaa gcccaccacc accgaggggc tcgaggccgc cctggcccgg
     3301 atcaaggggt atgcgacgcc ccggcgcaag cggttgctgg tgatcgagga cgacgaggcc
     3361 gagcagcaga gcatccgggc tttgctgggc cacgaggatg tcgagatcga aaccgccacc
     3421 accgggcagg gcgcgctcgc cgccctgcgg gaacagccgt acgactgcgc cgtgctcgat
     3481 ctgcggttgc ccgatatgac cggcttcgac gtgctggaga ccatccggga cgatcaggcg
     3541 ctctcggatt tgccggtggt ggtcttcacc ggcaaggagc tctcgcccga ggaagacagc
     3601 cggctccaca ccctggcccg gagcgtcgtg gtcaaggggg tcgagtcgcc cgaacggctg
     3661 ctggacgaga ccgcgctctt cctccaccgc ctggtggccg acctcccggt ggagaagcaa
     3721 cggatgctcg accggctgca ccggtccgac gacgacctgg tgggcaagaa ggtgctggtg
     3781 gtcgacgacg atgcccggaa catcttcgcg ctgagcagcg tgctggagcg ccgcgggatg
     3841 gaggtgctga cggcggggac cgggcacgag gccatcgatc tgctctacgg gacggagggt
     3901 gtggcgatcg tcctgatgga catcatgatg cccgacatgg acggatacca gaccgtgcag
     3961 gcaatccggc agaaaccggg gctgggtcgg ctgcccatca tcgcgctcac cgccaaggcc
     4021 atgaagggcg accgcgagaa gtgcctcgaa gccggcgcgt ccgactacct agccaagccg
     4081 gtgaacaccg agcaacttct ctcggcgctg cggttgtggt tgcatcgcta ggcggagagc
     4141 cgtcatgacc aacgccgacc cggtcaacat tctcctggtg gatgaccagc cgggcaagct
     4201 gctcagctac gaggccattc tggccccgct gggggatcgg ctgatcagcg ccggctcggg
     4261 acgggaggcg ctgaggctcc tgctcaagca tgagatcgcg gtggtgctga tggacgtgag
     4321 catgccggat ctcggcgggt tcgagctggc ggagatcatt cgcgagcatc cccgctttca
     4381 gaagaccgcc atcatcttcg tctccgccgt gcatatgtcc gacctggacc ggctcaaggg
     4441 gtacgagtcg ggggcggtgg actacgtcgc ggtcccggtg gtgccccagc tgctccgggc
     4501 caaggtcgga gtattcgcgg agctgtaccg caagacccgg gaatcggagc ggctcaatcg
     4561 ggagctggag cggcgggtgg ccgaacgcac cgccgagctg gaagcgtcca tggcgcggca
     4621 aatcgagctc tcggaacggt tgcgtgaggc cgaccggcgc aaggaccact tcctggcgct
     4681 cttggcccac gagctgcgca atccgctcgc gccggtcagc aacgcggtcg ggatcatgcg
     4741 ccgcaagacc atcgaggacc ccgatctggt ctggtgccgc gacgtgatcg cacggcagac
     4801 caatcagctc acccggctgg tggacgatct gctcgacgtg tcgcggatca cgctcgggaa
     4861 gatcaagctg cggctggaaa cggtggatct cgcggccgtc atcgcgggtg cagtggagac
     4921 cagccggccc ctgatcgacc gccggcgcca ccggctctgc attacccagc ccgatcgaag
     4981 ggtccggatg gtgggcgacc aggctcggct gacccaggtg gtggccaacc tgctcaacaa
     5041 cgcggctaca tatcagaacg agggcggtca gatcgacctg atcgcctccg aacgggagaa
     5101 cgacgccctg atcaccgttc gggaccaggg catcgggatc gcccccgaag ccctggtcga
     5161 cctgttcgag ctcttctctc agggggagcg cagccccgac agcctccacg gtggtctggg
     5221 gatcggcctc tccctggtga agacgctggt ggaaatgcac ggcggaaccg tctccgccgc
     5281 cagtgaaggg cccggccgcg gcagcgagtt cgtggtgcgg ctgccctgtg ccccggccga
     5341 gccgggccgg ctggaggaaa acggcttcag ctcgagcgcg atgctcgagg ggccgccccg
     5401 tcggattctg gtggtggacg acagccgcga tgccgcggag acgctggcgc tgctgctgac
     5461 gttgagcggc cacgaggtcc tggtcgcgca tgacgggccc ggcgccctgg cgctggccgt
     5521 ggcggagcgg ccgacagtgg tcctgctcga tatcggcctg ccggggatgg atggttatga
     5581 ggtctgccgc cgggctcggg agcagggcct ccgggatacc acgatcatcg cgatgagcgg
     5641 atacggtcag gaccgggacc ggcagcgctc cagcgaggcg ggctttgacg gccacacggt
     5701 gaagccggtg gcaatcagcg agctgaccgc tctgctcgcg aaggcctcgc tccactcccg
     5761 gtcgtgattc ggtcgctagc cgatccggcc ccggggcttg ggggctcgtc gggccttgga
     5821 ggtcacgggg agtgagatgc tggtggaggt cggggtcgaa accacgatgg gcggtgcgac
     5881 cagcagggcc gaggcgctcg cgggcgtttc ggtctgccgg tcgcggcggc aacccaggag
     5941 accggcgctc accacagcag ccagcaacgc ggttcggagt gttctcatgg tctgacctcc
     6001 gccatccttc gtttcggcc
//
LOCUS       DASWKS010000573         6395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3270912, whole genome shotgun sequence.
ACCESSION   DASWKS010000573 DASWKS010000000
VERSION     DASWKS010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6395
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3270912"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VGA78_16275"
     CDS             <1..783
                     /locus_tag="VGA78_16275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895488.1"
                     /translation="GFTPRAAASGPSWNYHPLESGYLPGSAFSDPTILPRDNWPYLYL
                     RDRELPVNYLTSIIALLTLAVTATLWTMRGGASVNLQFFFLGAGFLLVETKAMTELGL
                     FMGSTWTVNVLVIVAVLILILLANALATRPWCPPSRVLYGALIVVLLASWSIPLAPLL
                     AWSSPARNPVAVAVLTLPLFFAGVIFSRELRIAPSSSGALGANLLGALIGGAAEYSGM
                     VLGFRSLYLVGLGFYALAWLSSVVGRSRAPGTTGLAAMPEAL"
     gene            780..1685
                     /locus_tag="VGA78_16280"
     CDS             780..1685
                     /locus_tag="VGA78_16280"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX9895489.1"
                     /translation="MIDGTSITVHSRRRDFWQRYLVLALGLAAALAVWNPLWWRLNLL
                     LFGGPVVVAVIWLRDTRVAAQWAAYAASFAIFVFLRPMVDDWGPGPFAEYVITLDRWL
                     GLGTVPTVALQHAFYDSTAPAWWDWLGTIVYQSYYVCVPLVGLLVWRYRPAYLGPYLL
                     GMSLAYLLGLFFHWLAPTVPPWMASMDGLLPPLHRPAWELIGGWDSRATDAYMEFARK
                     VDGNAVAAMPSLHTAAAVLVARAAWMGPRWVRVLGITYAVFMLLVLVYFAEHYIVDGL
                     AGAFLLLACWKMVPASKGRGAGIAL"
     gene            complement(1835..2503)
                     /locus_tag="VGA78_16285"
     CDS             complement(1835..2503)
                     /locus_tag="VGA78_16285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895490.1"
                     /translation="MWATPEALAGVSWSFYESVFRSFPYWNQLEWALLGLGALGSWQT
                     RKDPALTRRLCWAGLAVYAALAILARAPVEVWRMVPQQLRYIQFPERLLRLAGFCFAL
                     TLGMATSILRGRLGTAVTAAIGLMVALLAFHLGRQILPRSGERSTEILKRLNTPYPDR
                     GLTVVGEYLPLGREPDSLAAAIQRTRDRIGSAPLLSWEKSGGGIPCRSAQRHTRSRYR
                     RAEH"
     gene            complement(2541..3284)
                     /locus_tag="VGA78_16290"
     CDS             complement(2541..3284)
                     /locus_tag="VGA78_16290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895491.1"
                     /translation="MPEAELFGEPSIIPTRLVLDHYWALFRERSFWLPIRNSLIVAGA
                     TTALSVTLGSLSAYAIARLRFRGKSLVPYLTFATPLTIWLLVGFFRQLPAELEAAADE
                     GAATHLAGLAGIVLAGVACFASLTLLGASLLPSAVAGTLYALLPYTWVALEIRGAFAE
                     TWALVFYPLVLAGGVLSFRQGHPVRWLPWAVAGSLASHLVMTAWAVPVLAVIALLAAA
                     PEVRWNGVWRTAAAGALGAGKMALFILRR"
     gene            3375..3671
                     /locus_tag="VGA78_16295"
     CDS             3375..3671
                     /locus_tag="VGA78_16295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895492.1"
                     /translation="MPEGLAFDCAAATLARGDLWNLVTDAGRLDLVFTPSGTTGYEDL
                     VRNAVPFEVYGVTIAAASLPDIIRSKEASDRPQDRQEVVLLRALTETGRTAGWR"
     gene            complement(3976..4050)
                     /locus_tag="VGA78_16300"
                     /pseudo
     CDS             complement(3976..4050)
                     /locus_tag="VGA78_16300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
     gene            complement(4435..6054)
                     /locus_tag="VGA78_16305"
     CDS             complement(4435..6054)
                     /locus_tag="VGA78_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895493.1"
                     /translation="MSRWPSAVAAVAVVLTVLLGHRQLLQPVALTTRDHTDFYLRIQQ
                     YHQELADGHWPQNLPDAVRGGGHAFPLFYPPLSHATAVAVYQVTDDVVSATHYTALAA
                     AVLAGLACFLVLQSLTGGVLPAAVAGAAYAVMPYPYVALDIRGAFAESWALVFFPLVL
                     LGFLRSFERGSPPRWLPLAVAGMMATHLVMSAWTLPVLLGLSLFSALPRLTSSRILLT
                     GGACLIAAGLVAPFVVPSLTGLGAVRAADPVLMHATPEAIAGVSWQFLSGVFGTFPYW
                     KQVQVVLFGIGLLGLIRSWREPDPVRRLCWVAVVMYALLTGLAEAPAAVWRLVPQQLR
                     YIQFPQRLLGPASLCLVVAAAIATSWLPSRRRAILLTPIGVLIILYAWSIGGMVLPRS
                     GERGPSVLARLATDYPDRGLTVVGEYLPREAEPERLAAAIQATLDGVGREPLLDWRRE
                     PRRFVGQMAVPEPAEVPLPLVRYGFYEVRVDGRQGATGSIEGQLSVLLDPGSHQVVVT
                     RRWPTSLRLGMAIGIASWLVLLLGLPPRRHS"
     gene            complement(6063..>6395)
                     /locus_tag="VGA78_16310"
     CDS             complement(6063..>6395)
                     /locus_tag="VGA78_16310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895494.1"
                     /translation="QYAWPTQRVFIDGATDVYGAAIMRAHTTVLALSPGWRDSLAAWK
                     IDMILLPTDQPMVSELVQDGTWAVWRCDATAALLRPAELGVAPDGSALAACRQARIPS
                     LAREPREP"
BASE COUNT         1110 a         2111 c         2134 g         1040 t
ORIGIN      
        1 ggtttcactc ctagagccgc ggcttccggg ccatcctgga actaccaccc gctggaatcg
       61 ggataccttc ccggaagcgc gttctcggat ccgaccatcc tccctcggga caactggccc
      121 tatctctacc tgcgggaccg cgaactgccg gtcaactacc tcacttccat catcgcgctt
      181 ctgacgctgg cggttaccgc gaccctctgg accatgcggg ggggagcctc ggtcaacctc
      241 cagttcttct tcctcggggc cgggtttctc ctggtcgaga ccaaggccat gaccgagctc
      301 ggcctcttca tggggtcgac ctggacggtc aacgtcctgg tcattgtagc ggttctgatc
      361 ctgatccttc tggcgaatgc gcttgcaacc aggccctggt gtcccccgag ccgggtcttg
      421 tacggggccc tgatcgtggt actcctggca agctggtcaa taccgcttgc tccgttgctg
      481 gcgtggtcca gtccggcgcg aaacccggtc gcggtggccg ttctcacgct cccgctgttc
      541 tttgcaggag tgatcttcag ccgtgaactc cggatcgcac ccagctcatc gggggccctg
      601 ggcgccaatc ttctcggggc cttgatcggt ggtgcggccg agtattcggg gatggtcctc
      661 gggttccgtt cgttgtactt ggttggtctc gggttctacg cgctggcctg gctcagctct
      721 gtcgtgggga ggagccgggc cccgggtacg actggcctgg cggctatgcc ggaggccttg
      781 tgatcgacgg gacgagcatc acagtccact cccgtcgccg cgacttctgg cagcggtatc
      841 tggtcctcgc actcggcctg gctgcggctc tcgccgtctg gaatccactc tggtggcggt
      901 tgaatctgct gctgtttggc gggccggtcg tcgtcgccgt catctggttg cgcgacacgc
      961 gcgtggccgc gcagtgggcg gcctacgcgg ccagttttgc cattttcgtc tttcttcgcc
     1021 cgatggtcga tgattggggc cctggtccat tcgcggagta cgtgattacg ctcgaccgct
     1081 ggctcgggtt ggggacagtg cccaccgttg cgctgcaaca cgcgttctac gattccaccg
     1141 caccggcctg gtgggattgg ttgggaacca tcgtctatca gtcatattat gtctgcgtcc
     1201 cattagtcgg gcttctggtc tggcgttacc ggccggccta tctcggcccg tatctcctcg
     1261 ggatgagtct cgcctacctg ctcgggttgt tctttcactg gctcgctccc acggttccac
     1321 catggatggc ctccatggat gggctcctgc caccattgca ccgcccggcg tgggagctga
     1381 tcggcggctg ggactccagg gctaccgatg cttacatgga atttgcgcgg aaggtcgatg
     1441 ggaatgcggt ggcggctatg ccgtcgctcc acacggcggc cgccgtactg gttgcgcgag
     1501 ctgcatggat gggccctcga tgggtcaggg tcctgggcat cacctacgct gtcttcatgc
     1561 ttctggtgct ggtctacttc gcggagcatt acatcgtgga tggacttgca ggcgccttcc
     1621 tgctgctggc ctgctggaag atggtgcctg cctcgaaagg acgtggggca ggaatcgcgt
     1681 tgtaggccgg taggcacgcg gatcgagatt ggagaaaagg tccttccctc gctatgcgga
     1741 aggccgccaa aagcgtgcgg tggtccatgg cagtgtagcg agacagagca ggctcaccat
     1801 caaccccact ttcgagctca cgggccattg ccgttcaatg ctcagctcgt cggtacctgc
     1861 tccgagtgtg acgctgagct gagcggcaag ggatcccgcc cccgctcttc tcccaggata
     1921 gcaacggcgc gctcccaatt cggtcgcggg tccgctggat cgcggctgcc agcgaatcgg
     1981 gttcgcgccc gagaggcagg tactcaccca cgaccgtcaa gcctcgatcg ggatacgggg
     2041 tattgagccg cttcaggatc tcggtactgc gctcgcccga acgtggcaga atctgtcgtc
     2101 cgagatggaa cgccagcagc gctaccatta gcccgatagc ggccgtcacc gcagtcccca
     2161 gccggccccg gaggatcgaa gtcgccatgc cgagcgtcag ggcgaagcag aatccggcca
     2221 gccgcaagag gcgctcggga aactggatgt acctcagttg ctgggggacc atccgccaga
     2281 cttcgaccgg cgcccgcgcc aggatcgcga gtgcggcata gacggcgagg cccgcccagc
     2341 aaagccggcg ggtcagggcc gggtccttcc gggtctgcca gctgcctaac gcgcccagac
     2401 cgagcagcgc ccactccagc tggttccagt acgggaagga acggaagact gactcgtaaa
     2461 atgaccacga gacgcccgcc agcgcctcgg gagtggccca catgagcccc gatcacccgc
     2521 ccggagtcct ttcaagtcga tcaacgccgc aggatgaaca gggccatttt ccccgcgccc
     2581 agcgcccctg cggccgcagt gcgccagaca ccgttccagc gaacttcggg cgctgccgca
     2641 aggagcgcga tcaccgccag caccgggacg gcccaggcgg tcatcaccag gtgactagcc
     2701 agagagcccg cgacggccca tgggagccag cggaccggat gtccctgcct gaacgaaagc
     2761 accccgcccg caagtaccag cgggtagaac acaagagccc aggtctctgc gaaggcgccc
     2821 cggatttcga gcgcgaccca ggtgtaaggg agcagggcgt agagggtccc cgccaccgcg
     2881 gacggtagca gcgacgcacc gaggagggtg agcgatgcga agcaggccac gccggccagg
     2941 acgatgccgg ccagcccggc gaggtgggtg gccgcccctt catccgccgc cgcctccagc
     3001 tcggccggta actggcggaa aaaccccacc agcagccaga tcgtgagcgg tgtggcgaag
     3061 gtgagatagg gcaccagcga tttcccccgg aaccggagcc gggcgatcgc gtacgcggag
     3121 agcgagccga gtgtcaccga caaggcggtg gtggcgccgg ccacaatcaa ggaattgcgg
     3181 atcgggagcc agaagctccg ctcccggaag agggcccagt agtgatccag caccagccgg
     3241 gtggggatga tcgagggctc cccgaagagc tctgcttccg gcatgaacga cgccgccagg
     3301 gcccactcta gagcgggaaa gagcgcctgg cggccgcgct gcgcgcgctc gacgcccggg
     3361 tctccaccga gtccgtgccg gaagggctcg ccttcgactg cgcggccgcg acgctggcac
     3421 gcggcgatct ctggaatctg gtgactgacg caggccggct cgacctggtc ttcacgccga
     3481 gcggtaccac cggctacgag gatctggtga ggaacgcggt gccgttcgag gtgtatgggg
     3541 tcaccatcgc ggccgcgtcg ctccccgaca tcatccgctc gaaggaggcg tcggaccggc
     3601 cccaggaccg gcaggaagtg gtgctgctcc gggctttaac ggagacgggc cggacggccg
     3661 gctggcggtg acagggcggg gttccgtatc aggcgttaag cgattcccac ccacctgctg
     3721 cctcggtcaa aggcgctcca cgattctggc atccgcctca aacacgtaat gcaggggatc
     3781 atcgacattg ccgccgagaa tgtcccagat gaggcaatcc gcattggtgg ccatcggccg
     3841 agccgagccc gcaatcggga actcctcgag atccccgctc gcgtggcgga gggtggcgac
     3901 accttcaaag cgaaccacga agtcgggatc gagccaggcc ctttgaaccc ggatgctgag
     3961 cgtctctgcc tccggtctgg tttgaggcat cggcccatcg acggccgaca cgatcagaat
     4021 tgcgccatcc atttgcgcag cgcctcccac gggctcttca tcatgcacaa tcatcgtggc
     4081 ctggaaccag gctcgctcag gatcggtgcg gccttcgagg gtgacaatct gcagaggtgc
     4141 aatcaggatc agtgacggtg tcgcaacggc aaatgccgcg gcactggttg cgcccgctga
     4201 atcggcgacg ggagccaggg gggccatctc acatgaggcc agagccatcg cggccccaac
     4261 cagtctccag cgaatcatcg ggcagccctc ctcgtcagtc gagacgcacc acggtcaagg
     4321 gtctggaact ccgttactcc tccctgcgtc agaaggacgg ttcgggggac aacgggggac
     4381 gggcgggcgg accgacggac cgacggaccg acggacggcc ggacggccgg acggtcagga
     4441 atgccttcgg gggggaagtc ccagcagcag aaccagccag ctggcaatgc cgattgccat
     4501 tcccagccgc aggctggtcg gccatctacg ggtaaccaca acctggtggg acccgggatc
     4561 cagcaacacg ctcaactgtc cctcgatgga tccggtcgcc ccctgccggc catcgaccct
     4621 cacctcgtag aaaccgtacc gcaccagggg aagcggtacc tcggctggtt ccggcacggc
     4681 catctgcccc acgaatcgac gaggctcccg gcgccagtcc agtagcggtt cccgtcccac
     4741 gccgtcgagc gttgcctgaa tggccgcggc cagccgttcc ggctccgctt cgcggggcag
     4801 gtactcgccc accacggtca gccctcgatc gggataatcg gtcgccagcc gggccagcac
     4861 cgagggtcca cgctcccccg accggggcag gaccatgccc ccgatgctcc aggcatacag
     4921 gatgatgagc accccgatcg gtgtcaggag aattgccctg cgccggctgg ggagccagga
     4981 ggtggcgatc gcggcggcaa ccaccagaca gagagacgcc gggccgagca ggcgctgggg
     5041 gaactggatg tagcggagct gctgcggcac cagtctccaa accgccgccg gcgcttcggc
     5101 cagccccgtc agaagggcgt acatcaccac ggccacccag caaagccgcc gaaccggatc
     5161 gggctctcgc caggaccgga tcagtcccag caacccgatg ccgaacagga ccacctgcac
     5221 ctgtttccag taggggaacg tcccgaagac cccgctcaag aactgccagg aaacgccggc
     5281 gatcgcctcc ggggtggcgt gcatcagtac cgggtcggcg gctcggaccg cacccaaacc
     5341 ggtgaggctc ggtaccacga agggcgctac caatccggcg gcgatcagac aggcgcctcc
     5401 ggtcaggaga atgcgggatg acgtgagcct cggcagggcg ctgaacagcg acagcccgag
     5461 cagaaccgga agggtccacg cgctcatgac caggtgagtc gccatcatgc ccgccaccgc
     5521 cagcggcagc cagcggggcg ggcttccccg ttcgaacgat cgcaggaagc ccagcagtac
     5581 cagcggaaaa aagacgaggg cccagctctc ggcgaaggct ccccggatgt cgagggctac
     5641 gtacgggtag ggcatgaccg catacgcggc gccggctaca gccgcgggca ggaccccgcc
     5701 ggtcagggac tggaggacca ggaaacaggc cagtccggcg agaactgccg ccgccagggc
     5761 ggtgtagtgg gtcgccgata ccacatcgtc ggtgacctgg tagacggcga cggcggtcgc
     5821 atgggacagg ggcggataga acagggggaa cgcgtgcccc ccgccccgca ccgcgtccgg
     5881 gagattctgg ggccaatggc cgtcggccag ttcctgatgg tactgctgta ttcgcagata
     5941 gaagtcggta tggtcgcgcg tggtcagggc caccggctgg agcagttgcc ggtggcccag
     6001 caggacggtg aggacgactg ccaccgccgc caccgcggag ggccagcgcg acatcgtggt
     6061 cgttacggtt cgcgtggttc gcgagcgagc gaggggattc gcgcctgtcg gcaggcggcg
     6121 agggcggaac cgtccggagc gactccgagc tcggccgggc gcaagagcgc ggcggtcgcg
     6181 tcgcaacgcc ataccgccca ggtcccatcc tggaccagct cgctcaccat cggctggtcg
     6241 gtgggaagca ggatcatgtc gatcttccag gcggccaggc tgtcccgcca tcccggtgaa
     6301 agcgccagga cggtggtgtg cgcccgcatg atcgccgcgc cgtagacatc ggtggctccg
     6361 tcgatgaata cccgttgggt cggccaggcg tactg
//
LOCUS       DASWKS010000574         2941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2184503, whole genome shotgun sequence.
ACCESSION   DASWKS010000574 DASWKS010000000
VERSION     DASWKS010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2184503"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2788)
                     /gene="polA"
                     /locus_tag="VGA78_16315"
     CDS             complement(<1..2788)
                     /gene="polA"
                     /locus_tag="VGA78_16315"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX9895495.1"
                     /translation="MHVPPHLFLVDGYALIYRAFYALLSRPLRTSRGENTSAAWGVAN
                     FLMRLRTKYQPEYLIWVNDAGDSGRTARYPEYKSTREKLDEAMQDDFKLALEQVGALL
                     AAFRVPLVAVPGWEADDVIGTLAHQAIGQGLQSVIVSGDKDLYQLIRPGVALLNPGRG
                     GSAGIEEQWVDLSNATERLGVAPAQVVDYLALVGDSSDNIPGVKGIGDKGARQLLAQF
                     GDLDSILARAGEVTQKRPREALLQFAAEARLSRELVTIRIDAPVSLDLEAVRIQSPDP
                     DRLRQVMARLEFHTLVPRVLGEQGAGSREQGIGSREQGAGSREEEALNGEQAAAVVPA
                     PASLLPAPSLDVTLIVDPALLTGLVSELAASGAFSVRAWTTGGGPREAGLLGLALALN
                     DRAWYLPFAHQPADGALAAPVIPRNLPALGDPSLAPLARLLADAGVAKLTHDAKTERE
                     LLRGAGVELAGVTRDLMLESFLIDPGRRSHSLETLALDHLGRSLRPRDQLLGKGKTAL
                     GPPQVGQDAAAECAAAELAVLQALAERFDQALVPGGLEPLYREIELPLVEVLVDMEWT
                     GIAIDPALFASLARELGADLERLRRRIGELAGTEFNLNSPRQMAAVLYEKLQLPMLKK
                     TKTGPSTDADVLEQLAAMGHDVPRLIIEHRELEKLRSTYVDVLPARVNRATGRIHTTF
                     NQTGAATGRISSSDPNLQNIPVRTPRGEAIRRGFVPSPGWSFVVADYSQIELRLLAHF
                     SGDPAFVAAFRENGDIHRQTAAVIFGLPVEQVTPDMRARAKTINFATIYGQGAFALSR
                     QLGITQEEARAFIGQYFERFAGVRAWLDQQVKLGRERGWVETLFHRRRYVPEIKDRNF
                     NTRAFGERLAQNSPLQGSAADLIKIAMIRIHRAFKDQRLSARLLLQVHDELVLEAPEE
                     EVDVVQEVVRGHMEG"
BASE COUNT          479 a         1023 c          991 g          448 t
ORIGIN      
        1 ctccttccat atgacctcgc accacctcct ggaccacatc cacttcctcc tccggggcct
       61 ccagtaccag ctcatcgtgc acctgcagca ggagtcgggc ggacaaccgc tggtccttga
      121 aggcgcggtg gatccggatc atcgcgatct tgatcagatc ggcggcggag ccctgcagcg
      181 gcgagttctg ggccagacgc tcgccgaagg cgcgggtgtt gaagttgcga tccttgatct
      241 cgggcacgta gcgacggcgg tgaaacaggg tctccaccca gccccgctcc cggccgagct
      301 tcacctgctg atccagccag gcccgcaccc ccgcgaaccg ctcgaagtac tgcccgatga
      361 aggcccgggc ctcttcctgg gtgatgccca gctggcgcga gagggcgaac gcgccctgtc
      421 cgtagatggt ggcgaagttg atggtcttgg cccgggcccg catgtcgggc gtgacctgtt
      481 ccaccggcag cccgaagatg acggcggcgg tctggcgatg gatgtcgccg ttctcccgga
      541 aggcggcgac gaaggcggga tccccggaga agtgggccag cagccgcagc tcgatctggg
      601 agtagtccgc caccacgaag gaccagccgg gtgaggggac gaacccccgc cggatcgcct
      661 caccccgcgg ggtccgcacc gggatgttct ggagattggg atcggacgac gagatccggc
      721 cggtggcggc gccggtctgg ttgaaggtgg tgtggatccg gccggtagcg cggttgaccc
      781 gggccggcag cacgtcgacg taggtggatc gcagcttctc cagctcgcgg tgctcgatga
      841 tgagccgggg cacgtcgtgc cccatggccg ccagctgctc cagcacgtcg gcgtcggtgg
      901 aggggccggt cttggtcttc ttgagcatcg gcagctgcag cttctcgtac agcaccgccg
      961 ccatctgccg ggggctgttg agattgaact cggtgccggc cagctcgcca atgcggcgcc
     1021 ggagccgctc cagatccgcg cccagctcgc gggccaggga cgcaaacagg gccggatcga
     1081 tggcgatgcc ggtccactcc atgtcgacca gcacctccac cagcggcaat tcgatctcgc
     1141 ggtagagcgg ctcgaggcct ccggggacca gggcctggtc gaagcgctcc gccagcgcct
     1201 gcaggaccgc cagctccgcg gcggcacact ccgccgcggc atcctggccc acctggggcg
     1261 gcccgagggc cgtcttgccc ttgcctaaca actggtcgcg gggccgcagg ctccggccca
     1321 gatgatcgag cgcgagggtc tcgagcgagt gggagcgccg gcccgggtcg atcagaaaac
     1381 tctcgagcat caggtcgcgg gtcactcccg ccagctcgac cccggcgccc cgcagcagtt
     1441 cccgctcggt cttggcgtcg tgggtcagtt tggccacgcc ggcatcggcc agcaggcggg
     1501 ccagcggcgc cagagacgga tcgcccagag cgggaaggtt ccggggtatg accggcgccg
     1561 ccagcgcgcc gtcggccggc tgatgcgcga acggcagata ccaggcccga tcgttcaagg
     1621 ccaacgccaa tcccaacaac cccgcctcac ggggaccgcc cccggtagtc caggcccgca
     1681 ccgagaacgc cccggacgcc gccagctcgg aaaccaggcc agtaagcagc gccgggtcga
     1741 caatcagcgt gacgtcgagc gagggagcag gaagcaggga ggcgggagca ggaaccacgg
     1801 cggcagcctg ctccccattc aacgcttcct cctccctgct ccccgctccc tgctccctgc
     1861 ttcctattcc ctgctccctg ctccccgctc cctgctcccc gagtactcga gggaccaggg
     1921 tatggaattc gaggcgggcc atcacctggc ggagccggtc ggggtcgggg ctctggatcc
     1981 ggacggcctc cagatcgagc gacaccggcg catcgatgcg gatggtgacc agctcgcgag
     2041 agagtcgagc ctcggcggcg aactgcaaca gggcttcccg gggacgcttc tgggtcacct
     2101 ccccggccct ggccaggatg gaatcgaggt cgccgaactg ggccagcagc tgccgtgcgc
     2161 ccttgtcgcc gatgcccttg acccccggaa tgttgtcgga gctgtcgccc accagcgcca
     2221 gatagtccac cacctgcgcc ggcgccacgc ccagccgctc ggtggcgttg gacaggtcca
     2281 cccactgctc ttcgatcccg gcgctgccgc cccgcccggg attgagcagc gccacgccgg
     2341 gacggatcag ctggtagagg tccttgtcac cggagacgat caccgactgc agcccctgcc
     2401 ctatcgcctg atgcgccaac gtgccgatga cgtcatcggc ttcccagccg ggcacggcca
     2461 ccagcgggac ccggaacgcg gccagcaagg cgccgacctg ttccagcgcc agcttgaagt
     2521 cgtcctgcat ggcctcgtcc agcttctcgc gggtggactt gtactcgggg tagcgcgcgg
     2581 tgcggccgga gtccccggcg tcgttcaccc agatcagata ctccggctga tacttggtcc
     2641 ggagccgcat gagaaaattg gcgacgcccc acgccgccga cgtgttttct ccccgactgg
     2701 tgcgaagcgg ccggctcagg agcgcgtaga aggcccggta gatgagggcg tagccatcaa
     2761 caaggaagag gtggggcggg acgtgcatcg ggggaagtgt acccagggac aaggtgtgag
     2821 gggggagtga atgcagagtg cccaatgccg aatgccgaat gcagaaggga ttaggccctc
     2881 acccctacct ctgctatggg cactgggcat tcggcattct gcattcactc ccccctcaca
     2941 c
//
LOCUS       DASWKS010000575        19430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2184530, whole genome shotgun sequence.
ACCESSION   DASWKS010000575 DASWKS010000000
VERSION     DASWKS010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 19430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19430
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2184530"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..1054)
                     /locus_tag="VGA78_16320"
     CDS             complement(137..1054)
                     /locus_tag="VGA78_16320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895496.1"
                     /translation="MQTCLLLLVASAAVQSPVQAPAESLFVYEGAAPLEVRDSLIQTL
                     ENGVRIFNLTYASPKGGLVTAYLVVPPGPGPFAGVLFGHWGLGNRSEFLPEAIHYAER
                     GAVGLMIDWPWTRWPPNRRDQGPLDKPEQDRAVFVQAVVDLRRGLDVLAARPDLDRRR
                     LGYVGHSYGAQFGAVLAAVDPRVSAAVLMAGIPDNATFMIESKDPDVLAYRARWTREQ
                     IESYMAVNAPVDAVGWVGRISPRPLLMQFGWYEHAIPMESMRRYAAASREPRTVLWYP
                     TGHELNDPRAWSDRTAWVIRQLHLSMPAR"
     gene            complement(1154..3109)
                     /locus_tag="VGA78_16325"
     CDS             complement(1154..3109)
                     /locus_tag="VGA78_16325"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX9895497.1"
                     /translation="MIATELSGETAKRNLEFIAREHRMRGSKGWHRAGQHVIDQLQAY
                     GFDDAHFERFPADGKIFYGTQRSRPPWEAEFAELWNLRQDSAGWVRQVRLASWDAMPV
                     TLAQDSESGEVTADLVDVGDGTAESDYAGKDVRGKLVLAAQQPGPVARLAVARFGAAG
                     IVSYAQNQRSAWWGEDENLVRWGHLEAFTPTKTFAFMVSLKQARAFQQRLARGEPVRL
                     EAKVKAGQHPGDYELVTATIPGADPRFRSEEIVYSCHLDHQRPGANDNASGCVTILEV
                     ARTLTKLIGDGRLPRPARTIRFVWPPEIEGTLALLTTRPELTARMKAVVHLDMVGGGP
                     ETKAIFHVTRGPASLPSFVYDVGGAFGAFVNRQSRAFAESGMAEYPLVAPEGGKEALQ
                     AELTELTLGSDHEVYTQGSFGIPAIYLNDDPDRYIHTNFDTPGNIDPTKLKRSGFIAA
                     ASGYYLANLGPSDAPALLDLVRSAAVRRTATMLTRRAVLPAAEAANLTRFHLAYERAV
                     VASLDRFITVTVAMHRESEAFLGNLERLVGGATPPQLGGAGGGEVYRRNPDLKGPMSV
                     FAYDYLSDHYGEAKAAALGLNQYSGLRGSGGDYVYEVLNLVDGRRTVREVRDAVSAIY
                     GPVPPEAVAEYLRALESVGVVLPAAGR"
     gene            complement(3450..6050)
                     /locus_tag="VGA78_16330"
     CDS             complement(3450..6050)
                     /locus_tag="VGA78_16330"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9895498.1"
                     /translation="MIRGFVLRMAWRESRGARRRLGLLTGAVAAGVAALVAVNSFAAN
                     LRDSVTAQAQALLGADLSLRSRRPFTERVSALFDTLATPGTDGTAGQMARVTSFNAMA
                     FVPRSSGVRLVEVMASEPGWPFYGQIQTRPAAAWPELQQGGRVLIDPSLLASLGAEVG
                     DTLALGEARLVIAGVVTSAPGNVAAASAFSPRIYIAASDLPTTNLLRFGARVEYEAFV
                     RLADPARAPDLARTYRPALRPERVSIRTVEDNRDDLRDALTRMGNYLGLVALIALLLG
                     GLGVASAVHVFIRQKLDTIAVLRCLGATAREIFVVYLVQALVMGGLGSAIGALLGLAV
                     QQVLPSVLQDLLPVDVQVRPATGAILLGMGLGLWVAVMFALLPLLSIRRVSPLVTLRR
                     DYERPDQGRDWLRIGTAVGLALGVTGLSILQVRDLRDGFFFAVGIGVSLFLLWLASLA
                     LIRGVRRFFPSRLPYLWRQGLANLYRPANQTVTVVLSLGFGATLLATLFLVQHNLLRE
                     MRVTGPVGRPNLVFFDIQADQSAGVLQEIRTAGITPSPPVAIIPMRIRSVKGKPVRWS
                     PADTLEDPEAEVADTGQAQDTTRVRGWAARREYRSTYRDSLVSSEKVVEGEWWNGPVG
                     DPRAAADVSLELEIARELSVTLNDTIVWDVQGALVPSVVRSIREVDWARFEPNFFAVF
                     RRGALDRAPQTLVTLVRVEDPVQRGSLQRRLAERFPNVTSIDIATVQITFEKILDRVA
                     LAVRFMAIFSLITGTIVLIGSIATTRFQRIREGVLLRTLGATRGQVLRVVFAEYLSLG
                     VLSSVMAVILASGATWAITRFIFDSSFALPYAALLGLALGVAALTVMVGFWNSLEVVN
                     RTPLEVLRND"
     gene            complement(6047..6721)
                     /locus_tag="VGA78_16335"
     CDS             complement(6047..6721)
                     /locus_tag="VGA78_16335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895499.1"
                     /translation="MLRCEGLTQTYLSGGRPLTVLKDISFTLDDGGFLAIVGPSGSGK
                     TTLLGLLAGLDRPVAGRVWLDDIELSLLDEDARARLRAQKVGFVFQSFHLIPTLTAQE
                     NVQVPLELRGEEGAEARAEALLRRVGLGDRMEHYPAQLSGGEQQRVALARAFSTRPRL
                     LFADEPTGNLDGRTGQTIVELMLELNRELGTTLILVTHDLDLARLARRTIRLADGMIV
                     EDQAAA"
     gene            6776..7447
                     /locus_tag="VGA78_16340"
     CDS             6776..7447
                     /locus_tag="VGA78_16340"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEX9895500.1"
                     /translation="MWLVSLLAAGCSAEREAPPPARAESTVAGVPSASRARPTVLVIG
                     TSLAAGYGLGPDVAWPAVLQRKIDSAGLTFRVINAGVSGETSAGALRRADWLLERERP
                     AVLILETGGNDGLRGIDPDSMRANIRGLFAKAQALATPPALVLFAMEAPPNLGDAYTG
                     RFRAAFTEAARESGATLVPFFLAGVAGVDSLNLQDGIHPTARGHELAATNAWRVLEPF
                     LRRLR"
     gene            complement(7451..9040)
                     /locus_tag="VGA78_16345"
     CDS             complement(7451..9040)
                     /locus_tag="VGA78_16345"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9895501.1"
                     /translation="MTAKSVPSFPLIRARYWAALLLPGGLGCADAVGGDGIPSAQFAI
                     RAELPSAMANGFFDLDIDRVRIRMTRPPAEPVLDTVVLFPADSSQLTVRLRVPLVSRR
                     EQLVLAMELRSGQRLLFAGSREVEVTDAATVAPAIPLQYVGPGQQVNGVRIEPRDSVL
                     KPGDTFTFKVFGFFNGVPVDEFYVGWASANPAIAAIDAAGSVTAPGNRGSVMIHAITP
                     TGVKDSTRLWFSPPPASMSLVGGNNQIGFAGSQLGALLAVQLVATDGLGVPGWRVRFI
                     PLGGGSVRDTLAITDAEGVARTVATLGHIAGNQPFEALIPFQPPVIFNIVAIAGPPAR
                     VLPLSGNGQTGQVGTLLNNLLVASVTDIFGNPAGGVPVTWSILSGNGTLEEASLETNP
                     SGLATALFRLGATPGGNTVRAAVGAAPLFTDFSATGTIGVADSIEIVSGDSVSALPGS
                     TLPPFVVRVTDAVGNPVAGVTVTWEIVTGTGVLTPASSLTDAAGTASTVYRLGPGFGT
                     REVQARIPGGKSVLFTATAAP"
     gene            9127..10125
                     /locus_tag="VGA78_16350"
     CDS             9127..10125
                     /locus_tag="VGA78_16350"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX9895502.1"
                     /translation="MPRDPQRRFALVLVAILGVALLIGVLPYAGGLLAAPVLAILWDP
                     LRQRLVRRLPVRVAAWIVLILTLILIVIPGIWLLSVLVVQAQNAVEALASSALLARLD
                     EEIRLGGIQVGPSIAGAGQAMLTWIGTNAFSLLGTATRFVLSLLFTLVGLYYLLVRPG
                     AAWNATEPYLPFSPERTAALRDRFEAVTWSTVVGTGLNAVVQGLLVGLAFRVLGLPNV
                     AFWGAVTAVLSILPLVGSGLVWGPAALSLLLDGRAGAAAAMTIWGAVVIANVDNLLRP
                     IVYRRYAHMHPMVTLVGAVIGVRYFGLVGLVLGPLGIQYFLELVVVYRAEYEVAGS"
     gene            complement(10392..11912)
                     /locus_tag="VGA78_16355"
     CDS             complement(10392..11912)
                     /locus_tag="VGA78_16355"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX9895503.1"
                     /translation="MRRIIAVAAVGLFAASPVLAQNPQKGTWEFGAFGRFNWYDQSFS
                     QDLDRRENSWGFGLRAARFFSPKWSLELDGSVNPTDLDTPIATSIGTVYIPFHLGVNY
                     NHPLGERLSWILGPRVSYNIYRQDEVPGVPEKEFQGSDWGIGGITGLRYKINETWSVR
                     LDGTLDWMPSPEVAEDDEDSNTMLGVQLGLSLFTGGRCRDKLDSIRVEPKTQNITMGD
                     RAGLRVSGFECDGDVIDATGTSTARITSGQGTLAGMSFTATQAGCVDIQVTNTNARRR
                     GTDNARICVEAPPAPPPVTLDRCELEPASTTAPPGESLTFKVTGFYSDGTSRDLPTAT
                     INADGGTVSGRTYTAPLAPGTYTIVAQCGDGRAARATVTVRALTVTLRALFGFNMTNV
                     ANQAEIDSLRLLSEELKRFPNLLLTIHGHTDWVGGVASNERLGMRRIQAVLDTLASYG
                     IDKARMDGWTKISFGECQPMADNRTRDGRAQNRRVAIFDTRSAPIISGSGQCRERP"
     gene            12189..13379
                     /gene="argG"
                     /locus_tag="VGA78_16360"
     CDS             12189..13379
                     /gene="argG"
                     /locus_tag="VGA78_16360"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEX9895504.1"
                     /translation="MQSPAIALAFSGGLDTSYCVPRLAEQGFAVHTVYVDTGGATPTD
                     LTAIRRQAEAVGAVEHHEVDARAAVFDRFVRFLIQGNVLRGEVYPLSVSAERTQQAIS
                     VTEVARRIGARAVAHGSTGAGNDQVRFDVAFRVLAPDLRIVTPIRDEGLSRERAIAYL
                     ESRRLPVPPKAGSYSINRGLWGTTWGGGWTHDTWAAPPAELLDPPADSPVPQDVIIAW
                     EQGVPVSLDGAALAGPDLVAALGGLTDRFGIGRNIHVGETAMGIKGRIGFEAGPALVL
                     IAAHRELEKLVLTKWQTFWKDQLGRFYGDRLHEGHYFDPALRDIEALFTSSQTRVTGE
                     TRVHLAPGRFMVTGSRSPYSMMDPAVATYGEENRLWTGEEARAFSRVASIPSFLAARA
                     GHRK"
     gene            13386..14474
                     /locus_tag="VGA78_16365"
     CDS             13386..14474
                     /locus_tag="VGA78_16365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895505.1"
                     /translation="MRTTRVRLDRIASATRNLRLSPEVIVGDEIVPAEGYALAVRILT
                     DKSTYNTVEDVSGRMMALRSGDVLAGVLGIRRALRGYAGDVPPHIAVGDTIEVLNLGG
                     ILGRCTSSNPDIGPPFKAEVLGAILSFPDLGDRIGKPATIRENAVPAAEVLEARLPVV
                     YVAGTCMNAGKTVAATELVRGLARAGQRVAAVKLTGVSLMRDTLSMLDAGAVSALTFN
                     DAGLASTHPGTTVAVARGLLNRLAADRVARPDLVIAELGDGILGEYGVQDILLAADLT
                     AVAAAFVVAAPDPVACWGAKQLFDHRFRQPVTVFTGPATDNEVGRDYIRGELKLPAHN
                     ALRDAASLVEVARQAVEDWRSRNPGVAA"
     gene            14471..15508
                     /gene="argC"
                     /locus_tag="VGA78_16370"
     CDS             14471..15508
                     /gene="argC"
                     /locus_tag="VGA78_16370"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX9895506.1"
                     /translation="MKVAVIGAAGYVGGELLRLLSLHPEVDEWIATSRSQAGKPIDGV
                     HPQLAGLTEARFSGLTPAEASAGRDVVFLCLEHGESSRLAAEVLDAGPALVVDLAADF
                     RIHDPALHHRYYGAHAAPELVHRFTYGLADVLGERLRGAKAIAAPGCFATAAQLALYP
                     LRHLGLAAPPSIFAVTGSSGAGASPRPTTHHPMRAHNLFAYSVFGHRHEGEVLEQWRD
                     WTGRSDAGARLLTHSGPFVRGIYLTLHATLAPGQSLPEGGVAGLLRDAYGDRPFVRVI
                     DHPPQLTHVVGTNLALLYGAASEDGREVQVLAAIDNLIKGAGGQALQAVNLALGLPEA
                     TGLRAGPVYPN"
     gene            15517..16674
                     /locus_tag="VGA78_16375"
     CDS             15517..16674
                     /locus_tag="VGA78_16375"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9895507.1"
                     /translation="MPVPEVTMEGPALLPVYAQMPVRPVRGHGSWLVDEEGQEWLDAY
                     GGHAVASTGHSHPDVVRAIADQAARLLFYSAAVPLALREQLAERLASLCPDPLAKVFL
                     CNSGAEANENALALARKRTGRRNVVSVRGGWHGRTPGVLACTDGPRYEEMARRSGIPL
                     STKVEFNDLSELESVVDGSVAAVIVEPVQGIQGARDCAPEFLAAAREICTRAGAALIF
                     DEIQCGTGRCGAFTAAESYHVVPDALTMAKGLAAGLPAGATVITPWLAEGLAIGDLGS
                     TFGGGPVVCAAALANLDVIERERLVDNAIEVGGYIRDRALQLGVPAVQGRGLLLGLRL
                     ARPAAEVQKALFSHRVITGTSADPRVLRLMPPLSFSRAEADLLLDAMGRVL"
     gene            16674..17681
                     /locus_tag="VGA78_16380"
     CDS             16674..17681
                     /locus_tag="VGA78_16380"
                     /EC_number="2.1.3.9"
                     /inference="COORDINATES: protein motif:HMM:NF003384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_function: GO:0043857 - N-acetylornithine
                     carbamoyltransferase activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylornithine carbamoyltransferase"
                     /protein_id="HEX9895508.1"
                     /translation="MPKRDFLAMEDWEPAEIDQLLDLAARVKRGAIGGGLERRVLAMV
                     FLDPSLRTRTSFETAMFLHGGHAVVLEPGKGSWSIETEIGAVMDGSTVEHIIEAARVL
                     ARYGDALAVRTFPKGTDWAVERTDPVIRNFARYSDKPVINLESVRRHPCQGLADALTL
                     REKLGETRGKKFVLQWAWHPKPLPTAVPASGAIAAAQLGMNLVIARPAGYDLDPDDLT
                     AISRLAHAQGGTVSVTDQLDEAIAGADAVYVKSWGSLQWFGRPEEEKAFRAPHRHWRM
                     TADLVRTTRAGRGIVMHCLPVRRNVEIDDAVLDGPNSAVVDEAENRLHAQRALLLEVL
                     G"
     gene            17678..18613
                     /gene="argB"
                     /locus_tag="VGA78_16385"
     CDS             17678..18613
                     /gene="argB"
                     /locus_tag="VGA78_16385"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEX9895509.1"
                     /translation="MTIDTNRGIAGLKGTLRYVRAYRDHVFVVKLGGEVVKDEHALDG
                     IAAQVSLLHSLGIRIVVVHGGGPQATALSRRLGIEPRIVAGRRVTDDAALEVAKLVYA
                     GGLNTDVLSALRAHQVQAVGLSGVDAELITARRRPPVTVVDDAGQSVTVDYGHVGDIQ
                     TVDPRVLTTLMEARFVPVVASLAGDGDGNVFNVNADTVAEAIGIALRAQKLIYLTGVP
                     GVLRDPKDPSSLVTFADPDDLAELMASGALSGGMRPKVEACLRAATGGVERTHIVDGR
                     APDSVLLEVFTGAGTGTMIVGRKEKATYLGVDLAD"
     gene            18591..>19430
                     /locus_tag="VGA78_16390"
     CDS             18591..>19430
                     /locus_tag="VGA78_16390"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9895510.1"
                     /translation="MAWTWPTDVTLLRDLVAIPSVSGTEERLGQFVEEWARDRGLAAE
                     RAEDGVLVTVDSGRPGRTLGFVSHLDTVPAGEGWVRPPFEPVIEGTLLYGRGSGDAKA
                     SVAAMLTAAHHLSGGRDQFRGRLLLLLGYGEETRHTSMPRLVTRAGIIDAAVVGEPTN
                     LQAAIAQRGLLMADLIARGDQRHAGYAGEESFQNAITRLAHELVKLEGLLNDRPHPVL
                     GTTTVTATMLEAGVSRNVTPPIAKAVLDVRSTPAWTHEEVAQALTDRLACEVVVTSQR
                     LVPC"
BASE COUNT         3113 a         6646 c         6490 g         3181 t
ORIGIN      
        1 gcccgcgatg aaggcgcgct tgttgcgcag gtcgagggaa agcatggctg gaaagatact
       61 gccggcaatg gaaagcgtcg gaccttccga cccttccgac tttccgaccc agacctaccc
      121 atgtcgcata gccaactcaa cgcgccggca tcgagagatg gagctggcga atcacccagg
      181 cggtgcgatc agaccacgcc cgggggtcat tcagctcgtg gccggtggga taccagagca
      241 cggttcgggg ttcccgtgaa gccgcagcat agcgccgcat cgactccatc gggatggcgt
      301 gctcgtacca gccgaactgc atcaagagcg gccggggcga aatccgtccg acccagccta
      361 ccgcgtcgac cggggcgttg accgccatgt aactttcgat ctgctctcgg gtccatcgag
      421 cccggtaggc cagcacatcg ggatctttgc tctcgatcat gaaagtcgcg ttgtcgggga
      481 tcccggccat caacaccgcg gcactgaccc gagggtccac agcggccagc accgcgccga
      541 actgtgcgcc gtagctgtgc ccgacgtagc cgagccttcg ccgatccagg tcggggcggg
      601 cggccagcac atccagaccc cgtcgcaggt ccaccaccgc ctgcacgaac accgcccggt
      661 cctgctccgg cttgtcgagc ggtccctggt cccgccggtt gggcggccag cgggtccagg
      721 gccagtcgat catcagaccg accgcgcccc gctcggcgta gtggatggcc tccggcagaa
      781 actcggaccg attacccaac ccccaatgtc cgaacagcac gccggcgaag ggtcccgggc
      841 ccggcgggac caccagatac gccgtcacca ggccgccctt gggactggcg tacgtcaggt
      901 tgaagatccg aaccccgttc tccaaggtct ggatcagact gtcgcggacc tcgagcggtg
      961 ccgctccctc atagacgaag aggctctcgg cgggagcctg caccgggctc tggaccgcgg
     1021 ccgatgccac cagcaggaga aggcacgtct gcatggcttc acctaaccga ttggagaatt
     1081 ccaagatacc tgtttgggcc cagctcaggt ctcagtgctc tgcgactggg tcgaagcctc
     1141 ggcgcgttca cggtcagcgc cccgcagccg gcaggaccac tccgactgac tccagcgccc
     1201 ggagatactc cgccacggcc tccggaggca ccggcccgta gatcgcggag accgcatccc
     1261 ggacttcgcg cacggtgcgg cgcccatcca ccaggttcaa cacctcatag acgtaatcgc
     1321 caccgctccc tcggagccca ctgtactggt tgagcccgag tgccgcggcc tttgcctcac
     1381 catagtgatc gctgaggtag tcgtaggcga agaccgacat cgggcctttg aggtcgggat
     1441 tcctgcggta cacctcgcct ccaccggccc ctcccagttg aggaggcgtg gcgccaccca
     1501 ccagccgctc cagattcccg agaaacgcct cgctctcgcg gtgcatcgcc accgtcacgg
     1561 tgatgaaccg gtccagcgag gccacgaccg cccgctcata cgccaggtga aaccgggtca
     1621 ggttggcggc ctcggcggcc ggcaacacgg cgcgccgcgt cagcatggta gcggtgcgcc
     1681 gcaccgccgc tgaacgaacc aggtcgagca gggcgggtgc atccgaaggg cccaggttcg
     1741 ccaggtagta cccgcttgcc gccgcgatga atcccgaccg cttgagcttg gtgggatcga
     1801 tgttgccggg ggtgtcgaag ttggtatgga tgtaacggtc ggggtcatcg ttcaggtaga
     1861 tcgcggggat cccgaacgag ccctgggtgt agacctcgtg atcgctgccc agtgtcagct
     1921 ccgtcagctc ggcctgcagc gcttccttcc cgccttccgg cgccaccagg gggtattcgg
     1981 ccatcccgct ctcggcgaaa gcgcgcgact gccggttgac gaaggcgccg aaggcgccgc
     2041 ccacatcata tacaaacgac ggcaggctgg ctggaccccg ggtgacgtga aaaatggcct
     2101 tcgtctcggg gccgcctccc accatgtcga gatgcacgac cgccttcatc ctcgcggtca
     2161 gttccggccg cgtggtcagc aacgcgagcg tcccctcgat ttcaggcggc cacacaaacc
     2221 ggatggtgcg agcggggcgg ggcagccggc cgtcgccgat gagcttggtg agcgtccgcg
     2281 ccacctccag aatggtgacg caaccgctgg cgttgtcgtt ggctcccggc cgttgatgat
     2341 cgagatgaca gctgtagacg atctcctcgc tccggaaccg aggatcggcg cccggaatgg
     2401 tggcggtgac cagctcgtaa tcgcccgggt gctgccccgc ctttaccttc gcttccagcc
     2461 gcactggttc cccccgcgcc aaccgctgct ggaaggcgcg ggcctgcttg agcgacacca
     2521 tgaacgcgaa tgtcttggta ggggtgaagg cctccaggtg cccccagcgg accaggttct
     2581 cgtcctcgcc ccaccaggcc gaccgctggt tctgggcgta actcacgatc cccgcggcgc
     2641 cgaaccgcgc gactgccagc cgggccaccg gaccaggctg ctgggccgcg aggaccagct
     2701 tgccgcgaac gtccttcccg gcgtaatcgg actcggcggt gccgtcccct acgtcgacca
     2761 ggtcggcggt gacttcaccc gactcgctgt cctgcgccag cgtcaccggc atcgcgtccc
     2821 aactggccag gcgaacctga cgaacccagc cggccgagtc ttgccggagg ttccacaatt
     2881 cggcgaactc cgcctcccag ggaggacggg accgctgggt gccgtagaag atcttgccgt
     2941 ccgccgggaa ccgttcgaag tgcgcgtcgt cgaatccgta cgcctggagc tggtcgatca
     3001 cgtgctgtcc cgcccgatgc caacccttcg agccgcgcat ccggtgctcc cgcgcaatga
     3061 actccagatt ccgtttggcg gtctcacccg agagctcggt cgcaatcacc gcgaccgtac
     3121 cccttggcaa caaaggcacg tcctgggagg ccagaagccg ggtcccaaga agggttatcc
     3181 cgagaagggt cctgaggtga tttgttgttg ccataccgtc gatacccctg cgagtgagtt
     3241 cttggtcgtc gatcctaaca gtaagtatcc gcagattacg cggatggcgc agatgacaaa
     3301 caacatccca tcgagtgttt tcagtcagtg aggttcagca gcgatgggtt acgctgtggt
     3361 tgatgttatc cgcgtaatct gcgtcatctg cggacaaact gccgtttact ccatgctgcg
     3421 agatgtcttg gatgagaacg actacctgat caatcgttcc gaagtacttc cagcggcgtc
     3481 cggttcacca cttcgaggct gttccagaac cccaccatca ccgtcaatgc ggccaccccc
     3541 agggccaggc ccagcagcgc tgcatagggc agcgcgaagc tcgaatcgaa gatgaaccgg
     3601 gtgatggccc aggtcgcgcc cgaggccagg atcaccgcca tgaccgacga cagcacgccc
     3661 agcgacaggt actcggcgaa gaccacccgc agcacctggc cccgggtggc acccagcgtc
     3721 cggagcagca cgccctcccg gatccgctgg aaccgggtgg tggcgatcga gccgatcagg
     3781 acgatcgttc cggtgatgag actgaagatc gccatgaagc gcaccgccag cgccacccgg
     3841 tccaggatct tctcgaaggt gatctgcacc gtcgcgatgt cgatcgaggt cacgttggga
     3901 aaccgttccg ccagccggcg ctgcaagctg ccccgctgga ccggatcctc cacccgtacc
     3961 agggtcacca gcgtctgggg cgcccgatcc agcgccccac ggcgaaacac cgcgaagaag
     4021 ttcggctcga accgggccca atccacctcg cgaatactcc gcaccacact ggggaccagc
     4081 gcgccctgca cgtcccacac gatggtgtcg ttgagcgtca cggacagctc gcgggcgatc
     4141 tccagctcga gcgacacatc ggccgcggcc cgagggtccc cgaccgggcc gttccaccac
     4201 tcgccctcca ccaccttctc cgagctcacc agcgagtccc ggtaagtgga gcgatactcc
     4261 cgccgcgcgg cccagccccg tacccgcgtg gtatcctgcg cctgtcccgt atccgcgacc
     4321 tcggcttcgg ggtcctccag cgtgtccgcc ggtgaccagc gcaccggctt tcccttcacc
     4381 gagcggatcc gcatcgggat gatggcgacc ggcggactgg gcgtgatccc cgccgtgcgg
     4441 atttcctgga ggacccccgc gctctggtcg gcctggatgt cgaagaagac cagattgggc
     4501 cggcccaccg gaccggtcac ccgcatttct ctgagcaggt tgtgctgtac caggaacagg
     4561 gttgccagga gcgtggcccc gaagccaagc gacagcacca cggtcaccgt ctgattggcc
     4621 ggacggtaga gattcgccag tccctggcgc cagagatagg gcaaccgcga ggggaagaag
     4681 cggcgcacgc cccggatcag agccagcgac gccagccaca gcaggaagag cgagaccccg
     4741 atgccgaccg cgaagaagaa cccgtcccgc aagtcgcgca cctgcagtat cgacagcccg
     4801 gtcacgccca gcgccaaacc caccgccgta ccaatgcgga gccagtcccg cccctggtcc
     4861 ggccgctcgt aatcgcgtcg cagagtcacc aggggagaga cccggcgaat ggaaagcaag
     4921 ggcaacagcg cgaacatgac ggcaacccac aaacccagcc ccatcccgag caggatggcg
     4981 ccggtggcgg gacggacctg cacatcgacc ggcagcagat cctgcagcac cgacggcagc
     5041 acctgttgca ccgccaggcc gagcaatgcc ccgatagcgc tgcccaaccc tcccatcacc
     5101 agtgcctgca ccaggtacac cacgaaaatc tcgcgtgcgg tcgcgcccag gcagcggagc
     5161 accgcgatgg tgtcgagctt ctggcggatg aacacatgca ccgcgctcgc cacgccgagc
     5221 ccgcccagca gcagcgcgat cagcgccacc agcccgaggt agttacccat gcgggtgagg
     5281 gcatcgcgca ggtcgtcgcg gttgtcctcc acggtccgga tcgagacccg ctccggccgg
     5341 agcgccggcc ggtaggtccg cgccagatcc ggggctcgag cggggtcggc cagtcgcacg
     5401 aatgcttcgt actccacccg ggcgccgaag cgcagcaggt tggtggtcgg gaggtcgctg
     5461 gccgcgatgt agatccgggg actgaacgcc gacgcggccg ccacgttgcc gggcgccgag
     5521 gtgaccacgc cggcgatgac caatcgggcc tcgcctaacg ccagcgtgtc gcccacctcc
     5581 gctcccaacg acgccagcag gctgggatcg atcaggaccc ggcccccctg ctgcagctcc
     5641 ggccaggcgg cggccgggcg ggtctgaatc tggccgtaga acggccagcc cggttcggag
     5701 gccatcacct cgaccagccg caccccggag gaccggggga caaaggccat cgcgttgaag
     5761 ctggtgaccc gggccatctg gcccgcggta ccgtcggtcc ccggcgtcgc cagggtatcg
     5821 aacagagccg acaccctttc ggtgaagggc cgccgactgc ggagcgacag gtcggcgccc
     5881 agcagcgcct gggcctgggc ggtgacggaa tcccgcaggt tggcggcgaa cgagttgacg
     5941 gcgaccagag ccgctacgcc ggcggctacc gctccggtga gcaggccgag ccggcggcgg
     6001 gcgccgcggc tctcccgcca cgccatgcgc aggacgaaac cgcggatcat gcggcggcct
     6061 ggtcctcgac aatcattcca tcggccaggc ggatggtacg ccgggccagc cgtgccaggt
     6121 cgagatcgtg ggtgacgaga atcagggtgg tgccgagctc gcggttgagc tcgagcatca
     6181 gctccacgat ggtctgtccg gtgcgtccgt ccaggttgcc ggtcggttcg tccgcgaaca
     6241 acaaccgggg ccgggtgctg aaggcccgtg ccagtgccac cctctgttgc tcgccgccgg
     6301 agagctgggc cgggtagtgc tccatccggt cgcccaaccc cacccgccgg agcagggctt
     6361 cggcccgcgc ctcggcgcct tcctctcccc gaagctcgag cgggacttgc acgttctcct
     6421 gcgccgtcag ggtcgggatc aggtgaaacg attgaaacac gaagcccact ttctgggcgc
     6481 ggagccgggc ccgggcgtct tcgtccagga gcgacagctc gatgtcatcc agccaaaccc
     6541 tcccggccac gggccggtcc agcccggcca gcaggcccag cagcgtcgtc ttgccgcttc
     6601 cggagggccc gacgatggcg agaaacccac cgtcgtcgag ggtgaagctg atatccttca
     6661 acaccgtgag cggccggcct ccggagagat acgtctgggt cagcccttca cagcgaagca
     6721 tgtcaccccc gttggagtcg gataacgagt aatgcaagct aagtacagtg tatccgtgtg
     6781 gttggtttca ctgctggcag ccggctgcag cgccgagcgt gaggcccccc ctccggcccg
     6841 cgcagaaagc accgtggcag gcgtcccctc ggcttcccgg gcccgaccca cggtgctggt
     6901 gatcgggacc agcctggcgg ccggctacgg actcggcccc gatgtggcgt ggcccgcggt
     6961 gctgcaacgc aagatcgatt cggccgggct gacattccgg gtcatcaacg ccggggtgag
     7021 tggggaaaca tcggccggcg ccctgcggcg ggccgactgg ctgctggaac gggagcggcc
     7081 ggcggtgttg atcctcgaga ccggcggcaa tgatgggctg cgcggaatcg acccggacag
     7141 catgcgcgcg aacatccgtg ggctctttgc taaggctcaa gcgctcgcaa ctcctcccgc
     7201 gctggtgctg ttcgccatgg aagcgccccc caatctgggc gacgcctaca ccggccggtt
     7261 ccgcgccgca ttcaccgagg cggcccggga gtccggtgcg actctggtgc cgttttttct
     7321 cgcgggagtg gccggggtgg attcactcaa cctgcaggac gggattcatc cgacggcgcg
     7381 gggccacgag ctggcggcca cgaatgcctg gcgggtgctg gagccgttct tgcgacgact
     7441 acggtaggag ctagggtgcc gcggtcgcgg tgaacaggac cgacttccct ccgggaatcc
     7501 tggcctggac ctcgcgggtc ccgaagccgg ggccgaggcg gtagaccgtg gatgcggtcc
     7561 cggccgcatc ggtgagggag gacgccgggg tcaatacacc ggtcccggtc acgatctccc
     7621 aggttaccgt cacccccgcc accggattcc cgaccgcgtc ggtcactctc accacaaacg
     7681 gcggcagggt ggagcccggc agggcggaaa cgctgtcgcc gctcacgatt tcgatcgagt
     7741 ctgccacgcc gatggtgccg gtggcggaga aatccgtgaa cagaggagcc gccccgaccg
     7801 ccgcacggac ggtgttcccg cccggcgtcg cgccgagccg gaacaatgcc gtggcgaggc
     7861 cgctgggatt ggtctccaga ctcgcttcct ccagggttcc gttgccggag aggatgctcc
     7921 aggtgacggg aacccctccg gccggattgc cgaagatgtc ggtcacgctg gccaccagca
     7981 gattgttgag cagcgttccc acctgaccgg tctggccgtt cccactgagg ggaagcaccc
     8041 gggccggcgg tccggcaatg gccacgatat tgaagatcac cgggggctga aacggaatca
     8101 gcgcctcgaa tggttggttg cccgcgatgt ggcccagggt cgccacggtg cgggccactc
     8161 cctcggcatc ggtgatagcg agcgtgtccc gcaccgaccc gccgcccaac ggaatgaacc
     8221 gcacccgcca cccaggcact cccagtccgt cggtcgccac caactggacc gccagcagag
     8281 cccccagctg actccccgcg aaaccgatct ggttgttccc cccgaccagg ctcatgctcg
     8341 ccggaggcgg cgaaaaccag agccgggtcg aatccttcac cccggtcgga gtgatcgcgt
     8401 ggatcatgac gctgccgcga ttgcccggag cggtcacaga gccggcggcg tcgatcgcgg
     8461 cgatggcggg attggcgctg gcccatccga cgtagaactc gtcgaccggc accccgttga
     8521 agaatccgaa caccttgaag gtgaaggtgt cgcccggctt gagcaccgaa tcgcgcggct
     8581 cgatccggac cccgttcacc tgttggccgg ggcccacgta ctggagtgga atggccggag
     8641 cgaccgtggc ggcatcggtc acctccactt cgcgcgaacc ggcaaacaac agcctctggc
     8701 cggaacgcag ttccatcgcc agcaccagct gctccctccg gctcaccagc ggcacccgca
     8761 accgaaccgt cagctggctg gaatcagccg gaaacagcac caccgtgtcg aggaccggct
     8821 ccgcgggggg tcgggtcatg cggattcgaa cccggtcgat atccaggtcg aagaagccgt
     8881 tcgccatggc gctcgggagc tcggcgcgga tggcgaactg ggctgacgga atgccatctc
     8941 cacccaccgc gtcggcgcag cccagccctc ccggcagcag cagggcagcc cagtaccggg
     9001 cccggatgag ggggaacgac gggaccgatt tcgctgtcat ggtcgcttca aatgtaagga
     9061 cctgaggaag atcgggcccc ggcccaagct ctcgcgtgac tcgattccgg gcgctaggtt
     9121 gcgcgcatgc cgcgagatcc gcagcgccgt ttcgccctgg ttctggtcgc gatactgggg
     9181 gtggcgctcc tgatcggagt gctgccgtac gccgggggcc tgctggccgc gccggtgctg
     9241 gccattctct gggacccgct tcgccagcgg ctggttcgcc ggcttcccgt ccgggtcgcc
     9301 gcctggatcg tgctgatcct caccctgatc ctgatcgtga ttccgggaat ctggctgctc
     9361 agcgttctag tggtgcaggc ccagaacgcc gtcgaagctc tggcatccag tgcgctcctg
     9421 gcgcggctgg acgaagagat ccggctgggc ggaatccagg tgggcccatc tatcgcgggg
     9481 gcgggccagg ccatgctcac ctggatcggc accaacgcgt tttccctgct cggtacggcc
     9541 acccggttcg tgctcagtct gttgttcacc ctggtgggcc tctactacct gctggtcagg
     9601 ccgggggcgg cctggaatgc caccgaaccc tatctgccct tctcaccgga gcgcaccgcg
     9661 gccctgcgtg accgcttcga ggcggtgacc tggtcgaccg tggtcggaac cggcctcaac
     9721 gccgtggtgc agggactcct ggtcgggctg gcgttccggg tgctgggcct gcctaacgtc
     9781 gccttctggg gcgcggtcac cgcggtgctg tccatcctgc cgctggtggg cagtggcctg
     9841 gtgtggggtc cggcggcctt gagcctgctg ctcgacggcc gggccggggc cgcggcggcg
     9901 atgacgatct ggggtgcagt ggtcattgcc aatgtcgaca acctgctccg gccgatcgtc
     9961 taccgccgct atgcccatat gcacccgatg gtcaccctgg tgggtgcggt gattggggtc
    10021 cggtatttcg gcctggtcgg gctggtgctg ggcccgctgg gaattcagta cttcctggaa
    10081 ctggtggtgg tctatcgcgc ggagtatgag gtagcgggtt cctaattccg gttcctattt
    10141 cagggttcca ggttccaggt tccaggttcc aggttccggg tgcggtgctg ggtgcggtgc
    10201 cggggtgcca ggtgtcacgt actccgttac ccgaggttcc agcaccggca cgtggcaccg
    10261 caccgcaccg caccaggcac ggtaccaagg accgtgcacg ctgcacagca acccagcacc
    10321 gcaccaggaa cctggaactc ggaacctgga acagaaaaag ccccggcctt gagccggggc
    10381 tttttcttcc cctacggtcg ctctcgacac tgcccgctgc ccgagatgat cggggcgctg
    10441 cgggtgtcga agatggccac ccggcggttc tgggcccggc cgtcgcgggt gcggttgtcc
    10501 gccattggct ggcactcgcc gaagctgatc ttggtccagc cgtccatccg cgccttgtcg
    10561 atgccgtagc tggccagggt gtcgagcacc gcctggatcc ggcgcatgcc cagccgctcg
    10621 ttggaggcca cgccgccgac ccagtcggtg tgaccgtgaa tggtcagcaa cagattgggg
    10681 aaccgcttca gctcttccga caggagccgg agcgaatcga tctcggcctg attggcgacg
    10741 ttggtcatgt tgaagccgaa cagggcccgg agcgtcaccg tgagcgcccg caccgtcacg
    10801 gtggcgcgcg ccgcccgccc gtcgccgcac tgagccacga tggtgtaggt gcccggcgcc
    10861 aacggagccg tgtaggtgcg gccggagacc gtgccgccgt cggcgttgat ggtcgcggtg
    10921 ggcaggtcgc gcgaggtgcc gtcgctgtag aacccggtca ccttgaaggt gagcgactct
    10981 cccggcggtg cggtggtgct ggcgggctcg agttcgcaac ggtccagcgt caccgggggc
    11041 ggtgcggggg gcgcctccac gcagatccgc gcgttatcgg taccccgccg gcgggcattg
    11101 gtattggtca cctggatgtc cacacagccg gcctgggtcg cggtgaagga catccccgcc
    11161 agcgttccct ggcccgaagt gatccgcgcg gtcgaggtgc cggtcgcgtc gatcacgtcg
    11221 ccgtcgcact cgaatccgga gacccgcagg cccgcccggt cacccatggt gatgttctgg
    11281 gtcttgggct ccacccggat cgaatcgagt ttgtcgcggc accggccacc ggtgaagagg
    11341 ctgaggccga gctgaacccc cagcatcgtg ttgctgtcct cgtcatcctc cgcgacttcg
    11401 ggcgatggca tccagtcgag agtaccatcg agccggaccg accaggtctc gttgatcttg
    11461 tagcggagcc cggtaatacc accaataccc cagtcgctcc cctggaactc cttttcgggg
    11521 acccccggta cttcgtcttg ccggtagatg ttgtagctca cccgaggtcc gaggatccag
    11581 ctcaacctct cgcccagcgg gtggttgtag ttgacgccga ggtgaaacgg gatgtaaacc
    11641 gtcccgatgc tggtggcgat cggcgtatcc agatcggtcg ggttgaccga cccatcgagt
    11701 tcgagactcc acttcggact aaagaaccga gcagcccgga ggccgaaacc ccagctgttc
    11761 tctctccgat ccagatcttg actgaatgac tgatcgtacc agttgaagcg cccgaaagcg
    11821 ccgaattccc aagtgccttt ctgcgggttt tgagccagga caggactggc ggcgaacaat
    11881 ccaacggcgg cgactgcgat gatccggcgc atcaggcaga gctccttact ccgggggaac
    11941 ggatccgaga atcccttccc ggtaagactc agacggctgc ctactgagtg caccaactgg
    12001 cctaaaatgg tacagcggct gtttttcagc aagccgggat taacattatg aattgcaagt
    12061 gtttaccgtc attgacatta acagatttgc ccgggcgctg ccgcgctccc tctccccact
    12121 gtttctgcct attcatgcgg aaggaccggg gttgtcagaa ccgtgtcctt aatgcatagt
    12181 tatgcactat gcaaagtcca gctattgccc tcgctttctc gggcgggctc gataccagct
    12241 actgcgttcc ccgactcgcc gagcagggct tcgccgtcca caccgtctac gtcgacaccg
    12301 gcggcgcgac cccgaccgat ctgacagcca ttcgccgcca ggccgaagcg gtaggtgccg
    12361 tggagcacca cgaagtcgat gcccgcgcgg ccgtcttcga ccgcttcgtg cggttcctca
    12421 ttcagggcaa cgtgctgcgg ggcgaggtct atcccctgag cgtgtcggcc gagcgtaccc
    12481 agcaggccat ttccgtgacc gaggtggccc gtcggatcgg cgcccgggcc gtggcccatg
    12541 gttccaccgg tgccggcaac gaccaggtcc gcttcgacgt ggcctttcgg gtgctggctc
    12601 ctgaccttcg catcgtgacc ccgattcgcg acgagggcct ctcccgcgag cgggccatcg
    12661 cctacctgga gtcgcggcgc ctgccggtgc cgcccaaggc gggatcgtat tccatcaatc
    12721 gcggtctctg gggaactacc tggggtggcg ggtggaccca tgacacctgg gccgcgccac
    12781 cggccgagct gctcgatccc ccggccgact cgcctgtgcc gcaggacgtc atcatcgcct
    12841 gggagcaggg ggtgccggtc tcgctcgacg gcgcggccct ggccggcccg gacctggtcg
    12901 ccgcgttagg cgggctgacc gaccgcttcg gcatcggccg gaacatccat gtcggcgaaa
    12961 ccgccatggg catcaagggg cggatcgggt tcgaggccgg cccggccctg gtgctcatcg
    13021 ccgcccatcg cgaattggag aagctggtcc tcaccaagtg gcagaccttc tggaaggatc
    13081 agctgggccg cttctacggc gaccggttgc acgagggcca ttatttcgat cctgccttgc
    13141 gggacatcga ggcgttgttc accagttccc agacccgggt caccggtgag acccgggtcc
    13201 atctggcgcc gggccgtttc atggtgaccg gcagccggag tccctactcg atgatggacc
    13261 cggcggtcgc cacttatggc gaagagaacc ggctgtggac cggtgaggag gcccgcgcct
    13321 tcagccgggt cgcgtcgatc ccctcctttc tggccgcccg ggccggccac cgcaagtaac
    13381 ccatggtgag aaccacccga gtccggctcg accggattgc ttccgccacc cggaacctcc
    13441 ggctctctcc tgaggtgatc gtgggcgacg agatcgtgcc ggccgaaggg tacgccctcg
    13501 cggttcggat cctcaccgac aaatccacct acaacacggt ggaggatgtg tcgggacgga
    13561 tgatggcgct tcggagcggc gacgtgctgg ccggcgtgct gggcatccgc cgggccctca
    13621 ggggctatgc cggcgacgtg ccgccccaca tcgccgtggg agacaccatc gaggtcttga
    13681 acctgggcgg catcctgggc cggtgtacct ccagcaatcc cgatatcggt ccgccgttca
    13741 aggccgaggt gctgggcgcc atcctgagct tccccgacct gggcgaccgg atcggtaagc
    13801 ccgcgaccat ccgggagaac gcggtccccg cggccgaggt cctcgaggcc cggctgccgg
    13861 tggtctacgt cgcgggcact tgcatgaatg cggggaagac ggtcgccgcc actgagctgg
    13921 ttcgggggct ggcccgcgcg ggtcaacggg tggccgcggt caagttgacc ggcgtctcgc
    13981 tcatgcgcga caccctgtcg atgctcgatg ctggagcggt ctccgctctc accttcaacg
    14041 atgccggtct ggccagcacc catcccggta ccactgtcgc cgtggcgcgc ggcctgctca
    14101 accggctcgc ggccgatcgg gtggcgcggc cggacctggt gatcgccgag ctgggtgatg
    14161 gaattctggg agagtacggg gtacaggaca ttctgctggc ggccgatttg accgcggtgg
    14221 cggccgcgtt cgtggtggcg gctcccgatc cggtcgcctg ctggggtgcg aaacagctgt
    14281 tcgaccatcg cttccggcaa ccggtcacgg tctttaccgg ccccgcaacc gacaacgagg
    14341 tcggccgcga ttacatccgg ggcgagctta agctcccggc ccacaatgcc ctgcgtgatg
    14401 cggcctcgct ggtcgaggtg gcccgtcagg cggtggaaga ctggcgcagc cggaatcccg
    14461 gagtggccgc gtgaaggtgg cggtgatcgg tgcggcggga tacgtcgggg gcgagctgct
    14521 ccgattgctc tcgttgcatc cggaggtgga cgagtggatc gccaccagtc gcagtcaagc
    14581 cgggaagccg attgacgggg tccatcccca gctggccgga ttgaccgagg ctcgcttctc
    14641 cggtctcacc ccggccgagg cgtccgccgg gcgtgatgtg gtcttcctgt gtctggagca
    14701 cggcgagtcc agccggctgg ccgccgaggt cctcgacgcg ggtccggcgt tggtggtgga
    14761 tctcgcggcg gacttccgca ttcacgatcc cgccctgcac catcgctatt atggcgccca
    14821 cgccgcgccg gagctggtgc atcgcttcac ctacggactg gccgatgtgc tgggcgaacg
    14881 gctgcggggg gccaaggcga tagccgcccc cggctgtttt gcgacggcgg cacagcttgc
    14941 cctctacccg ctccgtcatc tggggctggc cgcgccgccg tcgatcttcg ccgtcaccgg
    15001 ttccagcggg gcaggggcgt cgccccggcc gaccacccat catccgatgc gggcccacaa
    15061 cctgttcgcc tactccgtgt tcggccaccg tcatgagggt gaggtactgg agcagtggcg
    15121 ggactggacc ggccgttccg atgccggggc tcgtttgctc acgcactccg gtccgttcgt
    15181 ccggggcatc tacctgaccc tgcacgccac cctggcaccg ggtcagtcgc tgcctgaggg
    15241 tggcgtggcc ggtctgctcc gcgatgccta tggcgaccgg ccctttgtcc gggtgatcga
    15301 tcatccgccc cagctcaccc acgtggtggg caccaacctc gcgctgctct atggagccgc
    15361 cagcgaggat gggcgcgaag tccaggtcct ggctgccatc gacaatctca tcaagggcgc
    15421 gggcggtcag gccctgcagg cggtcaacct cgcgcttggt cttcctgaag cgaccggtct
    15481 cagggccggt ccggtctacc cgaactagga catcacgtgc cggtaccgga agtcaccatg
    15541 gaaggtcccg ctctgcttcc cgtctacgcc cagatgccgg tccgcccggt ccggggacac
    15601 ggctcctggc tggtggacga agagggtcag gaatggctcg atgcctacgg cggccacgcg
    15661 gtggcgtcga ccggacattc tcatcccgac gtggtacgcg ccatcgcgga ccaggcggcc
    15721 aggctgttgt tctactccgc agcggtgccg ctggctctgc gggaacaact cgccgagcgg
    15781 ctcgcgtcgt tgtgtcccga cccgctggcc aaggtgtttc tctgcaactc cggagcggag
    15841 gccaacgaga acgcgctggc gctggcgcgc aaacgcaccg gtcgacgcaa cgtcgtgtcg
    15901 gttcggggtg gctggcacgg gcgcaccccc ggcgtcctgg cctgtaccga cgggccccgc
    15961 tacgaagaga tggcccggcg ctccggcatt ccgctctcca ccaaggtcga gttcaacgac
    16021 ctcagcgagc tggaatcggt ggtggacggc tcggtcgccg ccgtcatcgt ggagccggtg
    16081 cagggaattc aaggcgcccg cgattgtgcc ccggagtttc tggccgcggc gcgcgagatc
    16141 tgcacccggg ccggagcagc gctcatcttc gacgagatcc agtgcggtac cggtcgttgc
    16201 ggggccttca ccgcggccga atcgtaccac gtggtacccg acgcgctgac catggcgaag
    16261 ggactggccg cgggactgcc ggccggcgcg acggtcatca ctccgtggct ggcggaaggg
    16321 ctcgccatcg gggatctggg cagcaccttc ggtggcggcc cggtcgtctg cgccgccgcg
    16381 ctggccaacc tcgacgtgat cgaacgggaa cgcctggtcg acaacgccat cgaggtcggc
    16441 ggctacatca gggatcgcgc cctccagctg ggggtgcccg cggtgcaggg gcggggactg
    16501 ctcctcggcc ttcgtctcgc gcgcccggcg gcggaggtgc agaaggcgct cttcagtcac
    16561 cgggtcatca ccgggacctc ggccgacccc cgggtgctgc ggctcatgcc gccgctcagc
    16621 ttctcgcgcg ccgaagccga tttgctgctc gatgcgatgg gccgggtcct ctgatgccca
    16681 agcgcgattt cctcgccatg gaggactggg agccggccga gatcgaccag ctgctggacc
    16741 tcgccgcccg ggtgaagcgg ggtgcgatcg gcggcgggct ggaacggcgg gtgctggcga
    16801 tggtcttcct ggatccgagc cttcgcaccc ggaccagctt cgaaaccgcc atgttcctcc
    16861 acggcggcca cgcggtggtg ctggagccgg ggaagggcag ctggtccatc gaaaccgaga
    16921 tcggcgcggt gatggacggc agcaccgtcg aacacattat cgaggccgcc cgggtgctgg
    16981 cgcgctacgg cgacgcgctg gcggtgcgga cctttcccaa gggcaccgac tgggcggtgg
    17041 agcggaccga cccggtgatc cggaacttcg cccgctactc cgacaagccc gtcatcaacc
    17101 tggaatcggt gcggcgccat ccctgccagg gactggccga cgcgctcacc ctgcgggaaa
    17161 agctgggaga aacccggggc aagaagttcg tgctccagtg ggcctggcat cccaagccgc
    17221 tcccgaccgc ggtacccgcc agcggcgcca tcgccgcggc ccagctcggc atgaacctgg
    17281 tgatcgcccg tcccgccggc tatgacctcg accccgacga tctgaccgcc atcagccgcc
    17341 tggcccacgc gcaaggcgga acggtgtcgg tcaccgacca gttggatgag gcgatcgcag
    17401 gtgccgacgc ggtctacgtc aagtcgtggg gatcgctcca gtggttcgga cggccggagg
    17461 aggagaaagc cttccgcgct ccgcaccggc actggcgcat gaccgccgat ctggtgcgca
    17521 ccactcgcgc cgggcggggg atcgtgatgc actgtctccc ggtccggcgc aacgtcgaga
    17581 tcgacgacgc cgtcttggac ggccctaatt cagcggtggt ggatgaggcc gaaaaccggc
    17641 tgcacgccca gcgggcgctg ctgctcgagg tactgggatg acgatagaca ccaaccgcgg
    17701 aatcgccggc ctcaagggca ccctgcgcta cgtcagggcg tatcgggatc acgtcttcgt
    17761 cgtcaagctg ggcggggaag tggtcaagga tgaacatgcc ctcgacggca tcgcggccca
    17821 ggtctccttg ttgcactcgc tcggcattcg catcgtggtg gtccatggcg gcgggcccca
    17881 ggccacggcg ctgtcccgcc ggttggggat cgagccgcgg atcgtggcgg gccgccgggt
    17941 caccgacgat gcggcgctcg aagtggccaa gctggtctac gccggtggcc tcaacaccga
    18001 cgtcctgtcc gcgctgcgcg cccaccaggt gcaggcggtg gggttgtccg gggtcgatgc
    18061 cgagctgatc acggcgcggc gccggcctcc ggtgacggtg gtggacgacg ccgggcaatc
    18121 cgtcaccgtg gactacgggc acgtgggcga catccagacc gtggatcccc gggtcctcac
    18181 cacgctcatg gaagcccgct tcgtgccggt ggtcgccagc ctggccggtg acggcgacgg
    18241 caatgtcttc aacgtgaacg ccgacaccgt ggccgaagcc atcggtatcg cgctccgggc
    18301 ccagaagctc atctacctca ccggcgtgcc cggagtgttg cgggatccca aggatcccag
    18361 cagtctggtg accttcgccg atcccgatga cctggcggag ctcatggcca gcggcgcgct
    18421 gtcgggcggc atgcggccca aggtggaggc ctgtctgcga gccgccaccg gcggcgtcga
    18481 gcggacccac atcgtcgacg gacgcgcccc cgattccgtg ctgctggaag tgttcaccgg
    18541 ggccggcacc ggaaccatga tcgtgggccg gaaggagaag gcgacctacc ttggcgtgga
    18601 cctggccgac tgacgtcacg ctgctccgcg acctggtcgc gattccttcg gtgagcggta
    18661 ccgaggagcg gctgggacaa ttcgtggagg agtgggctcg cgatcgcggg ctcgccgcgg
    18721 agcgggccga ggacggcgtc ctcgtgacgg tcgactcggg ccggccgggt cgaaccctcg
    18781 gcttcgtctc tcatctcgac actgtccccg ccggcgaagg gtgggtgcgt ccgccgttcg
    18841 agccggtcat cgaaggcact ctgctttacg gccgcggctc gggcgatgcc aaggcctcgg
    18901 tggcggcgat gctcaccgcc gctcaccatc tctccggtgg ccgggaccag ttccggggcc
    18961 gactgctgct cctcctcggc tatggggagg agacccgcca cacctccatg ccccggctgg
    19021 tgactcgggc ggggatcatc gacgccgcgg tggtgggcga acccaccaat cttcaggccg
    19081 ccattgccca acggggattg ctgatggccg acctgatcgc gcggggcgat cagcgccacg
    19141 ccgggtacgc cggggaggag agtttccaga acgcgatcac ccgtctggcg cacgagttag
    19201 tcaagctcga agggctgctg aacgatcgcc cccatccggt cctgggcacc accacggtga
    19261 ccgctaccat gctcgaagcc ggcgtcagtc gcaacgtcac cccgcccatc gcgaaggcgg
    19321 tgctcgacgt gcgcagcacg ccggcctgga cccatgaaga agtcgctcag gcgctgaccg
    19381 accgactggc gtgtgaggtg gtggtgacgt cccaacggct ggtcccctgc
//
LOCUS       DASWKS010000576         3381 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_677294, whole genome shotgun sequence.
ACCESSION   DASWKS010000576 DASWKS010000000
VERSION     DASWKS010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_677294"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VGA78_16395"
     CDS             complement(<1..332)
                     /locus_tag="VGA78_16395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895511.1"
                     /translation="MNRPARRRRGYGGVAPVLAPESRGRRGGRQRVGAHGVAIPQRGQ
                     SKIVASSTFPKSNPPSVSGGSTPRQPGLTTRRAAGVLPSRHLPEFETFVQTSHCNETS
                     WRHRHGLEV"
     gene            475..2145
                     /locus_tag="VGA78_16400"
     CDS             475..2145
                     /locus_tag="VGA78_16400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895512.1"
                     /translation="MGRRAYLRPDECHVVNPARLVPAAAVVITFVLVAVSPVSYAGSD
                     SYGTLVLSQNLIRRGTLILDADRDYFIEPDGTLRHSVGTVNGHLRFRYPLGASLLSAP
                     AVAAANLLGFDMRGSERLFQKLLSALIAALVVALLWRIGLARHGPLPAALLALLGFFG
                     TVVAPTIGGALWSMNFSVLFMGVAVWLLLQLERQPAQQRIALALGVVLFLGYLSRPTF
                     AAFILPVFGYLWITDRRALGTSAAASGLLFVIFTAWHWRTYGHVLPPEYVATGFDLSQ
                     LRFSLSAMLLSPSRSLIIWNPFLLVLPFLAWASWRGRSGARLAHPVLGAATLLLLVQA
                     GFSVWWGGWSYGPRIATEMVFLFLIGTILGCRPADPAPAGRRAFAALMAAFVLGAMVN
                     LRGLYSPSTQYWNGYPPVDQHPVPLVFDWRFPQFLANRDAVVRKYEVQSRELGLIADQ
                     FVPYQGRIAELLAGTARERTVRFQAGGSHQRFYARVVAVGMGFDTLRAWLNDSVVGEY
                     ALGAAASPLVPLPERLVHYQAENALRLEFQTGGGRRNALLGAFTIRQY"
     gene            2268..2633
                     /locus_tag="VGA78_16405"
     CDS             2268..2633
                     /locus_tag="VGA78_16405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895513.1"
                     /translation="MTITDRLTRKLRGAFGSEAADDMVGWMHGIETQRSELREMNEAN
                     YARVDAGFDRLEQRMTGVEQRIGGAEQGISIMAESLAHRLEAIERRHANLLKWAMTFW
                     IGSFFGTMVALAAMKASLP"
BASE COUNT          474 a         1181 c         1105 g          621 t
ORIGIN      
        1 acttccaatc cgtgcctatg gcgccagctc gtttcattac aatgacttgt ctgcacaaac
       61 gtctcgaatt ccggcaggtg cctggagggc aagacgccgg ccgcgcgacg cgtagtgagg
      121 ccgggctgtc gaggagtgga acctccggag accgaaggag gattgctctt gggaaaggtc
      181 gagctggcga cgatcttcga ctggccgcgc tgaggaatcg ccacgccgtg ggcccccacg
      241 cgctggcggc cgccccgtcg gccccgggat tcgggcgcca gcaccggcgc gacgccccca
      301 tagcctcgcc gacgcctcgc tggacggttc attcagccaa ccgtactttg ggatgatcac
      361 catcttctca ccatcacgga gctactgatg cgctggggcc acatcccgcg gggaacgcgc
      421 tgggtgacga tctgaacccg cggctctggg tggtgcgggt ccggtagcga cgcggtgggg
      481 cgccgggcat accttcggcc cgatgagtgt cacgtggtga atccggcccg cctggttcca
      541 gccgcggcag tcgtcattac gttcgtactg gtcgccgtct caccggtctc atatgccggg
      601 agcgacagtt acggaacgct cgtcctctcc cagaacctga tccggcgggg caccctgatc
      661 ctggatgccg accgggacta tttcatcgag ccggacggca cgcttcgcca ctccgtgggc
      721 acggtcaacg ggcacctgcg tttccggtat ccgctggggg cttccctcct ttcggcgccc
      781 gccgtcgccg cggccaacct gttgggcttc gacatgcgcg ggagcgaacg cctgttccag
      841 aagctcctgt cggccctcat cgccgcgctg gtggtcgcgc tgttgtggcg catcggactg
      901 gcccggcacg gccccctccc ggcggcgcta ctcgccctgc tggggttctt cgggacggta
      961 gtcgcgccga ccatcggcgg cgccctgtgg agcatgaact tttccgtctt gttcatggga
     1021 gtcgcggtat ggctcctgct acagctcgaa cgccagcccg cgcagcagcg gatcgcgctg
     1081 gccctgggcg tcgtgctgtt cctgggatat ctgtcgcgcc cgacctttgc cgcgttcatc
     1141 ctgcccgtct tcgggtatct ctggatcacc gaccggcgcg cgctgggaac ctccgccgcc
     1201 gccagcgggc tcctgttcgt gatctttacc gcgtggcact ggcggaccta cggtcacgtg
     1261 ctcccacccg agtacgtggc caccggcttc gacctttcac agctgcggtt cagcctgtcg
     1321 gccatgctgc tcagtccgtc gcgcagcctc atcatctgga accccttcct gctggtgctg
     1381 ccgttcctgg catgggcgtc gtggcgcggg cggagcggcg cccgccttgc acaccccgtg
     1441 ctgggggcag ccacgctcct gctgctggta caggctggtt tttcggtctg gtggggtgga
     1501 tggtcctacg gaccgcgcat cgcgaccgag atggtcttcc tgttcctgat cgggaccatc
     1561 cttggctgcc ggcccgcgga cccggcgccc gcgggccgcc gcgcgttcgc ggccctgatg
     1621 gccgccttcg tcctgggtgc gatggtcaac ctgcggggcc tgtactctcc ctccacgcaa
     1681 tactggaacg ggtatccccc ggtggaccag cacccggtcc ccctggtgtt cgactggcga
     1741 ttcccgcagt tcctcgcgaa ccgggatgcg gtggtccgca agtacgaagt ccagagccgg
     1801 gagttgggcc tgatcgccga ccagtttgtc ccttaccagg gccggatcgc ggagctgctg
     1861 gccggcaccg cacgggagcg gacggttcgc ttccaggcgg gtggaagcca ccagaggttc
     1921 tacgcccggg tagtcgcggt cggcatggga ttcgacaccc tccgggcatg gctcaatgac
     1981 tcggtggtgg gagagtacgc gctgggggcg gccgcctcgc cgctggtgcc gctgccggaa
     2041 cggctggtgc actatcaggc ggagaacgca ttgcgcctgg aattccagac cggcggcggg
     2101 cggcgcaacg cgctcctcgg tgcatttacc atccggcagt actgaagggg cttcgcgccc
     2161 gggaccacag ttccgggcgc gtttgtctgt acctccacgc aattgtttgc ccacctaccc
     2221 gtctcggcct accttgagat tagccgatcc tctaccaggg acggcgcgtg acaatcacgg
     2281 accggctcac acgcaagctg cggggagcat tcggtagtga ggccgccgac gacatggtag
     2341 gctggatgca cggaatcgag actcagcgct ccgagctgcg cgagatgaac gaggcgaact
     2401 acgcgcgggt agacgccggt tttgaccggc tggagcagcg catgaccggc gtcgagcagc
     2461 gcatcggcgg cgcggagcag ggcatcagca tcatggcgga aagcctggct caccggctcg
     2521 aagcgattga gcggcgccat gcgaacctgc tgaaatgggc catgacattc tggatcgggt
     2581 cgttcttcgg caccatggtc gcgttagcgg cgatgaaggc ctccctgccg tagtcctagg
     2641 gtttcagcag cactttcccg gtcgtctgcc gcccttccag ctgccggtgc gcctcggccg
     2701 cttccttgag cggaaacacg cgctccttcc tgagccgtat tttcccttcg cgtcgatttc
     2761 ttccagtcgc gcgtctctgg ccgccgccga gtcggcgatc tggagggcgc gtcccacccc
     2821 ctgggccccc ggcaggcgcg atgccgccac ggcactgtcc cgctgccgct gggttacttc
     2881 cccaccctgc accgccgaat cagatcccga acgcgcccag accagcaacg cgaccagccc
     2941 acctgcgccg ccatgcgccc accgtccgcc acctcggcgt aagccgcgtg cgcccccgcc
     3001 gctggatcct gggttcgggg agttgcgggc tgcacgcggg ttggcccgat cgggccggat
     3061 cccgaccccg cacgcgccgg cggccgcccc cgccggcccc gggattcggc cgccagcacc
     3121 ggcgcgaccc cccccatagc ctcaccgccg cctcgctgga cggttcattc agccaaccgt
     3181 actttgggag ggccgattga aatcccttat tccgatggcg gcggggtccg cgccggctcg
     3241 cggcgtatgt ccggtcgggt tatcatagga gcagctcagt cagacccgcg caggccccga
     3301 atcccaacgc cgttccagtg acggcttgag tcccatgaac tgtccgcgat gcggtgacgg
     3361 tctcaaaccg ggtgaccggt t
//
LOCUS       DASWKS010000577         3865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1420057, whole genome shotgun sequence.
ACCESSION   DASWKS010000577 DASWKS010000000
VERSION     DASWKS010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420057"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1705
                     /locus_tag="VGA78_16410"
     CDS             <1..1705
                     /locus_tag="VGA78_16410"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895514.1"
                     /translation="LRPLSTPLDATLAQEIAQREGASAVVAGEIAPLASGYVLSVRLL
                     GADGSTLLAEREIANDVGGIIPAVERLSKSLREDIGESLRSLRAEEPLQQVSTSSLEA
                     LRLYSQAEQVNNAGRGLEAVRLLEQAVAQDSTFAMAWRKLAVVLGNWGFDPARRAGAA
                     QRAYELRDRLPRREGALATAYWFHFQGRRSEAIAAYRQLLATWPDDYASRNNLGLLFN
                     QEGHYAEAESLLQTAIDSGSTLMANFDNLIDAQLLARNYPGAERTVTTFAARLPRLTE
                     IRQGFSSRIAQVRGDYQHALALMDSMVGSSDPARRSWAWSTSATLLRLQGRLREALNA
                     DREWLLASQQVGRESHMGSAITQEVIQAMIEAQLLGRLEAARRRLVTALKEHPLDSLP
                     PAGRPYALVVVAFLQARAGDQARELLQQYQRAGQAGGEESSGDLDWAEGMMALSDGRH
                     AEAIERLRSAARRWGCRMCAQVPIGQAFDRLGQADSALAAYEEYASRQMYWNMGQEVD
                     LAPTYVRLGELYEARGDRARALEYYGKFIDMWKNADAELQPRVAEIRRRVGELAREPA
                     R"
     gene            1726..2037
                     /locus_tag="VGA78_16415"
     CDS             1726..2037
                     /locus_tag="VGA78_16415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895515.1"
                     /translation="MATKTRILIVLLLAVTIAAVVIIRMPSAADCRDGGGMIDSTFRN
                     CISPAGTVRLREHVVGHLIEFLPLVLVVVIVGGVIHHRMRTRRSSNDQSPPSPARPPG
                     P"
     gene            complement(2034..2537)
                     /locus_tag="VGA78_16420"
     CDS             complement(2034..2537)
                     /locus_tag="VGA78_16420"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HEX9895516.1"
                     /translation="MTRTQLSIATTGFAALAGCAALSSLGIVPLRFSEPPGVRPELRL
                     LGPSVDRPLGGAALRLWARIENPNGIGVTLRQVAGDLHIEDAEAVAVDFPLGLPLVAH
                     QDTIVPLDVSLRFDHLPRLARLARAALTGNPLGYRLEGSFSVDAGSLGSPRFGPLTLL
                     TGEIRVR"
     gene            complement(2553..2717)
                     /locus_tag="VGA78_16425"
     CDS             complement(2553..2717)
                     /locus_tag="VGA78_16425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895517.1"
                     /translation="MGLAARGLRDLGHGEEPITNPEELAQVRRQARRVYQGSALMAIG
                     LTIVALLLPE"
     gene            complement(2718..2924)
                     /locus_tag="VGA78_16430"
     CDS             complement(2718..2924)
                     /locus_tag="VGA78_16430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895518.1"
                     /translation="MEQSKHPVSNIGPGGQRKRATWGAGSLAVAVGLAVVLIATDQPR
                     LFRLILAVPLWGAGLGLLQAKGKT"
     gene            complement(2950..>3865)
                     /locus_tag="VGA78_16435"
     CDS             complement(2950..>3865)
                     /locus_tag="VGA78_16435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895519.1"
                     /translation="PVHVMDQLIKALELLREKHRFAGYIHVKLVPGADPAQIDRLTSL
                     ASRVSLNFEAACGATLAEIAPDKNWDVTRQNFEQVRSLVVREREARDHGRPVDPLHPG
                     GASGMTLQFVVGATPETDQTLIGTVARLRLGGGVHHPHFSAFRPITRTPLENLPAAPA
                     LREHRLYQAAYLLTDYGFGTDEVQYQSSGNLPLSVDPKCAWALAHPERFPVEVRTASY
                     EELVRVPGVGPIAARRLVQRRNGLLLRGLRDLRALGVVTTRAAGFLTLRGRQLGTTRW
                     TEQLGFWSPEDEVGAYHLTYEVSPGTFR"
BASE COUNT          649 a         1284 c         1362 g          570 t
ORIGIN      
        1 gctgcggccg ttgagcacac cactcgatgc caccctggcc caggaaatcg cccagcgcga
       61 aggagcctcc gccgtggtgg ccggcgagat cgcgccgctg gcgagcggtt acgtgctgtc
      121 ggtccggctg ctcggggccg acgggtccac cctgctggcg gagcgggaga tcgccaacga
      181 tgtcggggga atcatccccg ccgtcgagcg gctgtcgaag agcctgcggg aagacatcgg
      241 cgaatcgctc cgaagcctcc gggccgaaga gccgctgcaa caggtctcga ccagctcgct
      301 cgaggcgctc cgactctact cccaggccga acaggtgaac aacgccgggc gggggctgga
      361 agccgttcgt ctgctggagc aggcggtggc ccaggattcc accttcgcca tggcctggcg
      421 caagctggcc gtggtgctgg gcaactgggg attcgatccg gcccggcggg ccggggcggc
      481 gcaacgggct tacgagctgc gggaccggct gccccggcgc gagggcgccc tggcgaccgc
      541 ctactggttc catttccaag gccgccggag cgaggcgatc gctgcctacc gtcagctgct
      601 cgcgacctgg cccgacgatt acgcctcccg caacaacctg gggctgctgt tcaaccagga
      661 gggtcattac gccgaagccg agtcgctgct ccagacggcg atcgacagcg gatcgaccct
      721 catggccaac ttcgacaacc tgatcgacgc tcagctgctg gcgcggaact accccggggc
      781 ggagcgcacc gtcaccacgt tcgccgcgcg actgccgcgg ctgaccgaga tacggcaggg
      841 cttcagcagc cggatcgcgc aggtgcgggg ggactaccag cacgccctgg ccctgatgga
      901 ctcgatggtt ggcagcagcg atccggcgcg gcgaagctgg gcgtggagta cgagcgccac
      961 cctgctccgg ctccagggcc ggctgcggga agcgctgaac gccgaccggg agtggctgct
     1021 ggcgtcacag caggtgggac gggagtctca catgggatcg gcgatcaccc aggaagtgat
     1081 ccaggcgatg atcgaagccc agctgttagg caggctcgag gccgcccgcc gacgattggt
     1141 tacggcgctc aaggagcatc cgctcgactc gcttccaccg gctggccggc cctacgccct
     1201 ggtggtcgtc gcattcctcc aggcccgcgc cggcgaccag gcccgcgagt tgctccagca
     1261 ataccagcgg gcggggcagg ccggcggcga ggagtcgtcg ggtgacctgg actgggccga
     1321 ggggatgatg gccctgtccg atgggcggca tgccgaggcg atcgagcggc tgcgaagcgc
     1381 ggcgcggcgg tgggggtgcc ggatgtgcgc ccaggtcccg atcgggcagg cgttcgatcg
     1441 gctggggcag gccgactcgg cgctcgcggc ctatgaagag tacgcgtcgc gtcagatgta
     1501 ctggaacatg gggcaggaag tggacctggc gccgacctat gtgcggctgg gtgaattgta
     1561 cgaggcgcgg ggggaccggg cccgggcgct ggagtactac ggcaagttca tcgatatgtg
     1621 gaagaacgcc gacgccgagc tgcagccccg ggtggcggag attcgccgcc gggtgggaga
     1681 gctggcccgc gaaccggctc gataaagccc tgggggggtg cgaccatggc taccaagacc
     1741 cggatactca ttgtgctgct gctagcggtg accatcgcag cggtggtcat catccggatg
     1801 ccgagcgcgg ccgattgccg ggacggcggc ggaatgatcg actccacctt ccgcaattgc
     1861 atcagcccgg ctggcaccgt ccgactgcgg gaacatgtgg tgggccacct gatcgagttt
     1921 ctgcccctgg tactggttgt ggtgatcgtc ggtggggtga ttcaccatcg aatgcgcacg
     1981 cgccgttcga gcaacgacca gtctcctccg agcccggcca ggcctcccgg gccctaacgc
     2041 acccggatct cccccgtcaa cagggtcagc ggcccgaagc gcgggctgcc gagcgacccg
     2101 gcatcgacac tgaaggaacc ctccagccgg tagcccagcg ggttaccggt cagagcggcg
     2161 cgtgccaggc gcgccaaccg cggcaggtgg tcgaagcgga gcgagacgtc gagcggcacg
     2221 atggtgtcct gatgggccac cagcggcagg ccgagcggga aatcgaccgc gaccgcctcg
     2281 gcatcctcga tatgcaggtc gccggctacc tgcctgagcg tgacaccgat cccgttgggg
     2341 ttctcgatcc gggcccagag ccggagcgcc gctccaccca ggggccggtc caccgagggc
     2401 ccgagcagtc tgagctcggg gcggacgccc ggaggctccg aaaaacggag tggtacgatc
     2461 cccagtgagg aaagggcggc gcacccggcc agggcagcaa agccggttgt ggcgatcgag
     2521 agctgcgtcc gggtcatgac ggcgctgtcc tgctattccg gtaggagtaa cgcaacgata
     2581 gtgaggccga tcgccatgag ggccgagccc tgatacacgc ggcgggcttg ccgccgcact
     2641 tgagccagct cctcgggatt ggtgatgggc tcctcgccgt ggcccaggtc gcgcagaccg
     2701 cgcgccgcaa ggcccactca ggtctttccc ttggcctgca gtagacccaa cccggcaccc
     2761 cacaagggga cagccaggat cagacgaaag aggcgcggct gatcggtggc gatgagcaca
     2821 accgcaagcc cgaccgcgac cgccagcgac ccggcgcccc aggtggcccg cttccgttgg
     2881 ccgccggggc cgatgttgga aacaggatgc ttggattgct ccattctctc gttccggctc
     2941 acacttgctt tatctaaacg ttcccggact cacctcgtag gttagatgat aagcccccac
     3001 ctcatcctca ggcgaccaga accccagctg ctcagtccac cgggtagtcc cgagctgtcg
     3061 gccgcgcaga gtcagaaacc cggcggcacg agtcgttacc acccccagag cgcgcaggtc
     3121 gcgcaggccc cgaagcaaca ggccgttacg gcgctgcacc agacggcgcg ccgcgatggg
     3181 cccaacgccc ggaacccgca ccagctcttc gtaggaggcg gtgcggacct cgaccgggaa
     3241 ccgctcggga tgggccaggg cccaggcgca tttaggatcg accgagagcg gaagatttcc
     3301 actggactgg tactgcactt catccgtccc aaagccgtag tcggtgagca ggtaggccgc
     3361 ctgatagagc cggtgttccc tgagcgcggg cgcggcgggc aggttttcca atggggtgcg
     3421 cgtgatcggc cggaaggcgc tgaagtgggg gtgatggacc ccgccgccca gccgcagccg
     3481 cgcgacggtg ccgatcaggg tctggtcggt ctcgggcgtg gcgcccacca cgaactgcag
     3541 ggtcatcccc gacgcgccgc cgggatggag cgggtcaacc ggcctgccgt ggtcccgcgc
     3601 ctcccgctcg cgcaccacca gtgaacgcac ctgctcgaag ttttgccggg tgacgtccca
     3661 gttcttgtcc ggtgcgatct ccgccagagt agcgccgcac gcggcctcga aattcaacga
     3721 cacccggctg gccagtgatg tgagccgatc gatctgcgcc ggatcggcgc cgggtaccag
     3781 cttgacgtgg atgtagccgg cgaaccggtg tttctcgcgc agcagctcga gcgccttgat
     3841 caactggtcc atcacgtgaa ccggc
//
LOCUS       DASWKS010000578         5346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1420082, whole genome shotgun sequence.
ACCESSION   DASWKS010000578 DASWKS010000000
VERSION     DASWKS010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420082"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..689)
                     /locus_tag="VGA78_16440"
     CDS             complement(<1..689)
                     /locus_tag="VGA78_16440"
                     /inference="COORDINATES: protein motif:HMM:NF012336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX9895520.1"
                     /translation="MVVFLSGVRTGFGSFGGSLKNLSATDLGSVAAQAAVQRSGLAPA
                     DIGHVVFGNVAQTSSDAAYLARHIGLRAGLLVETPAVTVNRLCGSGFEAIVQAAQQIM
                     LAEADAVLAGGAEAMSLSPHLVRGARWGLRLGNPPPLEDMLWSALTDAHCGMSMAQTA
                     ERLADQFELTRAEVDEVAWQSQQRAKAAWDGGAFSDEVIPIPLTDPKTRATIQWARDE
                     HMRPDTTPEALA"
     gene            complement(695..1282)
                     /locus_tag="VGA78_16445"
     CDS             complement(695..1282)
                     /locus_tag="VGA78_16445"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX9895521.1"
                     /translation="MTDLERFFERLVRNLAAIDLQRVKQPVPVLDIKASVMPYRTNRR
                     SLGLESSEEYEELLVRLVSQEGGLVSTAPPDVAEWCARQMASLTPDLSGIPGQAAATI
                     TVNPQALARVLGSSAAASVAASSDNPGSVSFGPEKCPHCEATLPDNRAVNFCPTCGRS
                     VTLIPCDSCGADLEPGWRFCTNCGQEVSEAGAAPT"
     gene            complement(1314..1940)
                     /locus_tag="VGA78_16450"
     CDS             complement(1314..1940)
                     /locus_tag="VGA78_16450"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H"
                     /protein_id="HEX9895522.1"
                     /translation="MPELPIAVVHLDESCLGNGMDRPALGGAGGLIEARAGRDPVRRE
                     VFISSPNTTNNKMALAGAIAVLQLLGRKQKRIRTLLISDSEYLVRGMREWVPGWIARG
                     WKRKDGAVENLELWQVLVASAAEHEVQLTWVRGHRGHPKNEYADRLAVRAAKEQITSA
                     GAVDSGFDSWLAAQRAAGRYLDYDPDAAFAGVERRLAAGERFPLDAGV"
     gene            complement(1940..3004)
                     /gene="selD"
                     /locus_tag="VGA78_16455"
     CDS             complement(1940..3004)
                     /gene="selD"
                     /locus_tag="VGA78_16455"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(2936..2938),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEX9895523.1"
                     /translation="MTTPPRDARPRIRLTSLSHGAGUACKLGSAELAQVLRHLPPVHR
                     ADILVDAATRDDAAVVRIAPDRALIATVDFFTPIVDDPGAWGAIAAANALSDVYAMGG
                     RPLFALNLVGWPRERLPFELLGDVLAGAARITEQAGCPMVGGHSIDDPEPKFGLAVIG
                     EAHPDRLLTNRGARPGDAILLSKPIGTGILTTALKRDLLGESDLAEAVSVMTTLNDTA
                     CRVALELGATAATDVTGFGLLGHLSNILHASEVGAEVWLDSIPSLSQALGLAARGSIP
                     GGTRRNLEATEAMWPEDAAEAERLLVVDAQTSGGLLFTVGEPNAEPALAALRAAGTPA
                     AARIGRITRDATLRVLRREI"
     gene            3057..3809
                     /locus_tag="VGA78_16460"
     CDS             3057..3809
                     /locus_tag="VGA78_16460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895524.1"
                     /translation="MTAAVLGFLHALEIDHMLAVTAFVSRRPSLWTAARFGFRWGMGH
                     SLAVLAVGGLLLITGLRWPERWDRGGEAAVGVMLVLIGVWSLRATRNLHLHPPAEHGD
                     HVHLHAHKRAQEAGSRREGAGRSEPAPSSLLPGPVHDHAGPHHHHHAHSRGITLVGLV
                     HGLAGTSAVVALVPVTLVDRVTIGAGYLVAFGLGTTAAMTVFALVTAAAMRQAADRSL
                     ALGKQVATLVGAGGVVVGLWWIGQAIWSGTGA"
     gene            3944..4144
                     /locus_tag="VGA78_16465"
     CDS             3944..4144
                     /locus_tag="VGA78_16465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895525.1"
                     /translation="MDRPFLAAFFLAAFRAGALAFLALLAFALAFFGAAFLGAAFLAA
                     AFLAAGRAAGRGAERAAGDGVD"
     gene            4383..>5346
                     /locus_tag="VGA78_16470"
     CDS             4383..>5346
                     /locus_tag="VGA78_16470"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX9895526.1"
                     /translation="MRALVMKGFGGLDQIGVAEVPQPALGSPDEVLVRVHAAAINRID
                     LYALQGLPKARYTFPHILGSDAAGLVEAVGERVTTVKPGDRVLVNPGVSCGRCDVCRA
                     GDQPLCRNFRILGEHLEGSAAEYLVVPEANLARIDAEWSWAEAAGFTLATLTSWRMLT
                     TRARLRAGETVLIWGIGGGVGLASVQIAALLGARVVATSSSDAKLEVARQLGADVTLN
                     HGTADVAREVRSLTGVGADVVLDCVGEKTWESSLKALRPLGRFVTCGATSGPQVTLDL
                     RRLFWFQWSLLGSTMGNDREFREIVALGERGSLRPVVDSVVPLDE"
BASE COUNT          782 a         1815 c         1856 g          893 t
ORIGIN      
        1 gcgagggcct ccggcgtggt gtccggccgc atgtgctcgt cccgggccca ctggattgtg
       61 gcccgggtct tgggatcggt gagcgggatc ggtatcacct catcgctgaa cgcaccccca
      121 tcccacgccg ccttggcccg ctgctggctc tgccaggcca cttcatcgac ctcggcccgg
      181 gtgagctcga actggtcggc cagccgttcg gcggtctgcg ccatcgacat gccgcagtgg
      241 gcatcggtga gcgcggacca gagcatgtcc tccaggggcg gagggttccc cagccggaga
      301 ccccagcggg ctccccgtac cagatggggc gaaaggctca tggcctccgc cccgccggcc
      361 aggaccgcat cggcttccgc cagcatgatc tgctgggctg cctgcacgat ggcttcgaag
      421 cccgaaccgc agagccggtt gacggtgacc gccggagtct ccaccagaag tccggcccga
      481 agcccgatgt ggcgggccag ataggccgca tcggacgagg tctgcgccac attgccgaag
      541 accacatgac cgatgtccgc cggggccagt cccgatcgct ggaccgcggc ctgggcggcg
      601 acgctgccca gatcggtggc gctcaggttc ttgagcgagc caccgaacga gccgaagccg
      661 gttcgaacgc ctgaaagaaa gacgaccatg gttctcaggt gggggcggcg ccggcctcgg
      721 agacttcctg tccgcagttg gtgcagaacc gccagcccgg ctcgagatcg gccccgcagg
      781 aatcacaggg aatcagggtc accgaccggc cacaggtggg acagaagttg acggcccgat
      841 tgtccggcag cgtcgcctcg cagtgggggc acttctccgg accgaacgac acgctgccgg
      901 ggttgtcgct gctcgcggca accgacgcgg ccgccgacga tcccaggacc cgggccagcg
      961 cctgaggatt caccgtgatg gtcgccgccg cctgacctgg aatgccggac agatcgggag
     1021 tgaggctcgc catctgccgg gcgcaccatt cggccacgtc gggtggcgcg gtactgacca
     1081 gcccgccctc ctggctgacc aggcgcacca gcagctcttc gtattcctcg ctgctctcga
     1141 gcccgaggga gcgccggttg gtgcggtagg gcatgacgct ggccttgatg tcgagcaccg
     1201 gcaccggctg cttcacgcgc tgcagatcga tcgccgcgag gttgcgaacc agacgttcga
     1261 agaaccgttc caggtcggtc acgtggctcc tcggagttga taggggctgc cgctcaaacg
     1321 cccgcgtcga gcgggaatcg ctctccagcc gccagccggc gctcgacacc ggcgaaggcg
     1381 gcatctggat cataatcgag ataacggcct gctgcccgct gcgcggcgag ccagctgtca
     1441 aaccccgagt cgaccgcccc ggccgaggtg atctgctcct ttgcggcccg caccgccagg
     1501 cggtccgcgt attcgttctt gggatggccc cggtgacccc ggacccaggt cagctgcacc
     1561 tcgtgctccg ccgccgaggc caccagcacc tgccacaact cgaggttctc caccgcgccg
     1621 tccttgcgtt tccacccccg ggcgatccag cccggcaccc attcgcgcat gccgcgcacc
     1681 agatactccg agtccgaaat caggagggtg cggatccgct tctgcttgcg tcccagcagc
     1741 tgcagcaccg cgatcgcgcc cgccagggcc atcttgttgt tggtggtatt gggcgagctg
     1801 atgaacacct cgcgccgaac cgggtcgcgg ccggcccggg cttcgatcag gccgcccgcg
     1861 ccccccagcg cgggccggtc cattccattg ccgaggcagc tttcgtcgag gtgcaccacg
     1921 gcgatgggca gctcgggcat cagatctccc gccggagcac acgaagcgtg gcgtctctgg
     1981 tgatccggcc gatgcgtgcc gcggccggag tccccgcggc ccggagggca gcgagcgctg
     2041 gctcggcgtt gggctcgccc acagtgaaca ggagaccgcc cgaggtctgg gcatcgacca
     2101 ccagcagccg ctccgcttcg gcggcgtcct caggccacat ggcctcggtc gcttccaggt
     2161 tgcgccgggt tccccccggg atggacccgc gggccgcgag ccccagggcc tggctcagag
     2221 aggggatcga gtccagccag acttcggctc ccacttcgct ggcgtgcaag atgttgctca
     2281 gatggcccag caggccgaaa ccggtcacgt cggtggccgc ggtcgctccc agctcgagcg
     2341 ctactcggca ggccgtgtcg ttgagggtgg tcatgaccga caccgcctcg gccagatcgg
     2401 attcacccag cagatcgcgc ttgagggcgg tagtgaggat gccggtgccg atcggcttgc
     2461 tcaacagaat ggcatccccg ggccgagcgc cacggttggt aagcaagcgg tcggggtggg
     2521 cctcgccgat cacggccagc ccgaacttgg gttcggggtc gtcgatggaa tggccgccca
     2581 ccatgggaca tccggcctgc tcggtgatcc gagcagcgcc ggccagtacg tcacctagca
     2641 gctcgaacgg cagtcgctcc ctgggccagc cgaccagatt gagggcgaag agcggccttc
     2701 cccccatggc gtacacatcg ctcagggcgt tggcggcggc gatggcgccc caggcgccgg
     2761 gatcgtccac gatgggcgtg aaaaaatcca ccgtggcgat gagggcgcgg tccggagcga
     2821 tccgtaccac ggcggcatcg tcacgcgttg ccgcgtccac caggatgtcg gcccggtgga
     2881 ccggagggag gtggcgcagg acctgcgcca attcggcgct gccgagctta caggctcaac
     2941 cggcgccgtg cgacagagac gtcaaccgga tccggggacg cgcatcgcgc gggggcgtcg
     3001 tcatatttcg ctgacctcgt tcgaaggatc ctgccctgac cgaactcgtc acgctggtga
     3061 cagcggcggt actcggcttc ctgcatgcac tcgagatcga ccacatgctg gccgtcacgg
     3121 ccttcgtgag ccggaggccc tccctctgga ccgcggcccg ctttggattc cgatggggca
     3181 tgggacactc gctcgccgtc ctggcggtcg gtggcctgct gctgatcacc ggcctcagat
     3241 ggcccgagcg gtgggaccgg ggaggggaag ccgccgtcgg cgtgatgctg gtgctcatcg
     3301 gcgtatggtc gcttcgagcg actcgcaact tacatctcca tcctccagcc gaacatgggg
     3361 accatgttca cctccatgcc cacaagagag cccaggaagc agggagcaga agggagggag
     3421 cgggaaggtc agagcctgct cccagctccc tgctccctgg accggtgcat gaccacgccg
     3481 gtccccacca tcaccatcac gcgcatagcc gggggattac gctggtgggg ctggtgcacg
     3541 gactggccgg taccagcgcg gtggtggccc tggtgccggt gaccctggtg gaccgggtga
     3601 cgataggtgc cgggtatctg gtggcgttcg ggctgggcac gaccgcggca atgacggtct
     3661 ttgccctggt cactgccgcc gcgatgcggc aggcggccga tcggtcgctg gctctgggca
     3721 agcaggtcgc gaccctggtc ggcgccggtg gagtggtggt ggggctgtgg tggatcggtc
     3781 aggccatctg gtccggtacc ggggcatgac gcgccatggg gcgtcccgaa cccggggcgc
     3841 cccacgacgt catccctcca gatgaacgcg gccttacttc tttcgggccg gccgcttggc
     3901 ccgttttgcc ttgctcccgc cccgcttcat ggcccgaccc atcatggacc gacccttctt
     3961 ggccgctttc ttcttggcgg ctttccgggc gggggccttg gccttcctgg cactcttggc
     4021 ctttgccttg gccttctttg gcgcggcctt cctgggcgcc gccttcttgg cggcagcctt
     4081 cttggcggca ggccgagcgg ccggccgggg tgccgaacgg gccgccgggg acggcgtgga
     4141 ttgaggttcc ggcttcggct cgggcgccgg aggcggcggt ggcggtgtcg acggcatcgg
     4201 gtccatccac ccctgcccgg accaacccat ctccatgttt cggaacgcgg ccatgcccat
     4261 gcgtccttcc tccggcggga accgcggcgt gccccgccgc gcgggggaga ggcgactgcg
     4321 cctcgtgttc gagtgccata tatcttgcac cacctttcaa cttctgcaag acgacagtgc
     4381 tgatgcgggc cctggtgatg aagggattcg gcggcttgga ccagattggg gtcgcggaag
     4441 tcccgcaacc agccctcggg tccccggacg aggtactggt ccgggtccac gccgcggcca
     4501 tcaaccggat cgacctctac gctctccagg ggctccccaa agccaggtac accttccccc
     4561 acatcctggg ctccgatgcg gccggcctgg tggaggccgt gggtgagcgg gtcacaacgg
     4621 tcaagccggg ggaccgggtc ctggtcaatc cgggggtttc ctgcggccgt tgcgacgtct
     4681 gccgggccgg ggatcagccg ctttgccgga acttccggat tctgggggag cacctcgagg
     4741 gcagcgccgc cgagtacctg gtggtgcccg aggccaatct ggcccggatc gacgcggagt
     4801 ggagctgggc cgaggcggcc ggcttcacgc tcgcgaccct gacctcgtgg cggatgctga
     4861 cgacccgcgc ccggctccgt gccggggaga cggtgctgat ctggggcatc ggtggtgggg
     4921 tgggattggc ctccgtgcaa atcgcggcgc tgctgggggc ccgggtggtc gccaccagtt
     4981 cctcagacgc gaaactcgaa gtggcacgcc aacttggggc cgatgtgacc ctcaaccacg
     5041 gcacggctga tgtggcccgc gaagtgcgta gtttgaccgg ggttggcgcc gacgttgtgc
     5101 tggactgtgt cggcgaaaag acctgggagt cttccctcaa ggctctccgc ccgctggggc
     5161 gatttgtcac ttgcggcgcc acctccggac ctcaggtaac cctcgacctc cgccggctct
     5221 tctggttcca gtggagcctg ctgggatcca ccatgggcaa tgaccgggaa ttccgtgaga
     5281 ttgtggcgct gggggaacgg ggttctctgc gcccggtggt cgatagtgtc gtgccgctgg
     5341 acgaag
//
LOCUS       DASWKS010000579        12628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2534482, whole genome shotgun sequence.
ACCESSION   DASWKS010000579 DASWKS010000000
VERSION     DASWKS010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12628
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2534482"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1595
                     /locus_tag="VGA78_16475"
     CDS             <1..1595
                     /locus_tag="VGA78_16475"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9895527.1"
                     /translation="QQQKAGAPDTVLRHPDTNAPFAARLDWARQTGRERRGGNYWVGY
                     IVTGSSAPAGWVYFDRHEPIRTGDVTLYGQVRISGPDQLSFSGVELRPLLGEYAGQDL
                     AIFLGYELVNGRPALSRIHVGSFGLPVHFGGWSLVWLGTVTDAESVELVRGLYQSAGS
                     TELAKDVVATVGVHGTSAVAVTALLEWLKSSSPEAIRQEAAEWLAHHDDPRVLPALSR
                     AVWTDGSDAVRQDAVEAMGSVARSAAADTIIRIARTHPDHSVRQEAVETLGEREEPAA
                     FNALISIARDDHSREIRMEAIETLGDLKDGRGVSILMELAQSHPDDASRREAVETLGD
                     AAPEAKTVELLLRIASADRSLAVRREAVETLGDMEEVPEAQRALRDLIERHPDGEVQK
                     QGVESMANSPGSDVLETLRDVARTHPKADVRREAIDGLARLDDPKAVEALRSIALTDP
                     DVSLQAAAAEALGEAHPHEAALKALQEIIWQHPTPDVARAAVEALADLEGPGVTELLR
                     EVIRRHPSISVQREAVDVLTRR"
     gene            1697..3046
                     /locus_tag="VGA78_16480"
     CDS             1697..3046
                     /locus_tag="VGA78_16480"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HEX9895528.1"
                     /translation="MTATTAVLGAEVRFRRPTAPPQLSRPIPSPSQLQWQQDELSLFL
                     HFGVNTFTDREWGDGKEDPAIFAPSRLDTRQWARSARAAGFRALILTAKHHDGFCLWP
                     SRTTRHSVESSPWRGGRGDLVREFVDGCRAEGLRAGLYCSPWDRNASSYGDSARYNDL
                     YCDQLTELLTWYGPIHEVWFDGANGEGPNGKRQAYDWPRFFGLVKRLQPQSVIFSDAG
                     PDVRWIGNEHGVAGDPNWSTVDPEAVPYPGATGEHVIRALQQGHPAGLVWRPGECDAS
                     IRPGWFYHPAEDEKVKTVRQLVELYFTSVGRNSKLLLNVPPTREGLLSPTDVARLEGL
                     ERELRSRFSRDAASGRRPSWRSTGARTAIAELDLGRSVRLGICGLGEDIAQGQRIASY
                     RVEGSNGGDWQTLSRGWTIGYRKLDRFEPRSLGRVRLLVDEAVDTPHPVQISLFPGE"
     gene            3085..3726
                     /locus_tag="VGA78_16485"
     CDS             3085..3726
                     /locus_tag="VGA78_16485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895529.1"
                     /translation="MPLIIRSTGSALHTAARGLLIMIGFGLVGAVLNWGVLLGLAALA
                     GLLPGGSPATGGVGAFSVGFLVLLLGLGFPLAWFMAAQPMAAAWSARHFYQRHKDDVM
                     GAIERALQSELGDEDAASMERWSLTIGTLQQSLEQQQPRPLRPVIRLALKQAGIPELE
                     AAVRQGSGPLPARLAQAVAHRFEDQLAGRGTMWLWVVFAANVVAVAVVILTLR"
     gene            complement(3757..5454)
                     /locus_tag="VGA78_16490"
     CDS             complement(3757..5454)
                     /locus_tag="VGA78_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEX9895530.1"
                     /translation="MHPLNWAIVVAYLVYVVVDGVRRAKGTRGIEGYFLAGRNLPWWA
                     VGLSVMATQLSAVTMIGTTGQGATDGMRFIQFYFGLPIAMVILGVTLVPFLHGARVFT
                     AYEFLERRFDAKTRSLTSFLFLISRGMSCGTIIAAPAVIFSAIFGWDVVWSVALIGFP
                     TVIYTMVGGVQAVTWADVKQMVLIVVALVAVVVVLLLRLPVSPDEALQVAGAAGRLRP
                     FDFSFDLSQTYTFWSGIIGGTFLMLSYFGTDQSQVQRYLTARSVNEARSSLLMSAYWK
                     IPLQALVLLVGVLVFVFYLFRAPPLLFNPAHQRQVEAAEPAAFAALNQRFTAALGEQQ
                     AAAHTVASLGGSDNEPTSRAADQALREREAQVTTVRNEALQLAARVTGQPARDVNYII
                     PRFVLDELPLGLAGLFIAGVMAAAMSSIAAELNSLSTATVIDFYRRWFRPQGTDAHYL
                     AVSKLATGVWGIFACVIATYAVSLGSLIEVVNRFGSFFYGSILGVFLLAMIPRARPSG
                     AFLGLVAGMAAVAAVTFGLPSVSFLWHNVVGALTVVLVGVAISLASPPGTHPAPGNP"
     gene            5697..6494
                     /locus_tag="VGA78_16495"
     CDS             5697..6494
                     /locus_tag="VGA78_16495"
                     /inference="COORDINATES: protein motif:HMM:NF025606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4344 domain-containing metallopeptidase"
                     /protein_id="HEX9895531.1"
                     /translation="MLVLGCRDQPPLPPPDPPPPPAPAAPTPAGGRFIASYGVASPLY
                     RQLRQSLMASRLLDTLVTGLNDTIRVRENVVLAATECGEPNAYYRPEARRVSLCYELL
                     DQLTRRYSRAEGSDLLIAGTFAFVLLHELGHAMVHLLDLPITGREEDAADQFATLLML
                     REGAVGDSLAFAVATMFAQQAESVAFEDLAFADEHGLDLQRVYNILCWIHGRAPERYP
                     EVVREGWLTEGRAERCPAEFNRIRASWRRLLAPHLKVRSDSGPIPYP"
     gene            complement(6517..8964)
                     /locus_tag="VGA78_16500"
     CDS             complement(6517..8964)
                     /locus_tag="VGA78_16500"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895532.1"
                     /translation="MSMFLHFDLRTALRALARSPGFLVTAVLSLAIAIGASAAAFSVL
                     DAVRLRALPFPDGDRLVVLSEVPLEGSPGGCRTACDVSYETYANVLRTTPLHSLDLVA
                     GYTGGGKALNLGGDPILVFGGVVSPNLFDLLQVRPVLGRSLTPEDDRLGVPTVVVLSH
                     ELWTSRFEADPRIVGRSIRLSDTDYTVVGVMPSGFNHEVQSQFWLPVVPTLDPSTRPS
                     IRSLTVIGRLTPGMSLAQLRGELATLDGAVIAGTGKDRTPMKLEAAPLRTRYSESTQA
                     HDLIFAAIVGCILLIAVANLANLVLVRSLHQQREFAIRSALGARSGRIVREQFAQQVV
                     IVLSAAVLGMVLSAWLLSRLGSLDTMRSLRPSGMEYRLDARVIGFTVLLALGIGALLS
                     LVPSRVASRTDVQGVLRDGAPTTTGGRRGIRLQQVFVVAQITLAVILLTGAGLMARTV
                     VRLSRVDLGFDPERLVEGSPSFPHPWRVKERFLPVTRQITAELLQLPGVESAAVRSTV
                     ALGPRGASPRVVLEGQAEPLPPGLVPSSGFAVTPGYFGALDIRVLRGRDFDSHDLEHT
                     QPVAIINDWAARRWWPGDDALGRTFRVDTLPGAPPLTLTVVGVVADNKAAQQNLLLAD
                     EGAEIYRPYEQAPSAFPAFVIRASGSPAALLRPTRELLARLVPDRPVFATRSSERVDD
                     QLSGVRVNALQILGFALVGLGLALMGIYGVLSYTVGRRTQELGVRGALGATRGRLTAL
                     VLVDAARLTAIGLAIGLPLASVAIRPIESGLHGTSRTDPLVYVAVGAVVMLVTLTASL
                     LPARRASRVDPIVALRA"
     gene            9016..9471
                     /locus_tag="VGA78_16505"
     CDS             9016..9471
                     /locus_tag="VGA78_16505"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9895533.1"
                     /translation="MLSTSQVLLAREQVIDRLNTLFISTDIRDWAAVRACFAATVHFD
                     MTSLAGGDPVILTPEAIARAWEQGLASIESVHHQAGNYRVTLDGDEAMAFCYGIAMHY
                     RPTRSGKNTRTFVGSYEFRLKLIGGDWRITIFRFNLKFLDGNIELEKEP"
     gene            complement(9523..9735)
                     /locus_tag="VGA78_16510"
     CDS             complement(9523..9735)
                     /locus_tag="VGA78_16510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895534.1"
                     /translation="MSAPGWGPEAFRSGGWSGGVFVGSAAWWLLLSGGASLARSRMTP
                     ERLRWINRGSGVVVAGFGITALIAAF"
     gene            complement(10218..10418)
                     /locus_tag="VGA78_16515"
     CDS             complement(10218..10418)
                     /locus_tag="VGA78_16515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895535.1"
                     /translation="MIALALALATACCPLPAPCSLLPAPLRLEKTHDCIPPPMRTPVN
                     SSALALRQNAQQQTQFSSRSPG"
     gene            complement(10428..11162)
                     /locus_tag="VGA78_16520"
     CDS             complement(10428..11162)
                     /locus_tag="VGA78_16520"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX9895536.1"
                     /translation="MRSPSPNQLLVLLPLLASPAAAQRGFDFGVVGGVNRNTMTGVGP
                     VEARYTGQVGLFAAFPASRYLSFRPEASVSWKRVGTRQAGIILDDPCPITVLCSNVEP
                     LETTSLTWLEVPLLMQVSLSTSRNGLVPRLYAGPFVAVRLGCSVSSEFDDQPVPLSET
                     ASQTAVARVSYGCDELAPARFDNGDAGFVVGGALKLREASLGLRWTRSLLPAMPQHAL
                     QSHVLSGGKQSTLSLTLELATRLGRR"
     gene            11328..11672
                     /locus_tag="VGA78_16525"
     CDS             11328..11672
                     /locus_tag="VGA78_16525"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9895537.1"
                     /translation="MTRLPTGAQLRVHDSISRIPGSHGERFVELLRHGTLAVELYAPR
                     GEDPQSPHDRDEVYVVVEGRGDFVCGDMRRVFGPGDLLLVPAGVVHRFEHFSDDLIVW
                     VIFYGPIGGELD"
     gene            complement(11705..>12628)
                     /locus_tag="VGA78_16530"
     CDS             complement(11705..>12628)
                     /locus_tag="VGA78_16530"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9895538.1"
                     /translation="NRPVSVVWSREDDIQHDFYRPVSYHRLSAGLDQAGAPIAWYHHV
                     VAPSIISRFIPGFVPGPIMRLAGPMKGGIDPTAVEGARELPYKIPSIEVRYTQADLGV
                     PVGFWRSVGNTHTAFVVETFIDELAALAGQDPVAFRRSLLPDDSRHRRVLDVVAERAG
                     WGSPLPNGTARGVAVHQSFGSWCAQVAEVAIETGGLRVRRVVAAFDCGVVVHPDTVVA
                     QIEGGIVYGLSAALKGKITIAGGRVVQSNFHDYPVLRLDEMPVIEVHLVPSGDAPGGV
                     GEPGTPPIAPAVANAVAALTGQRIRQLPIQL"
BASE COUNT         2245 a         4314 c         4210 g         1859 t
ORIGIN      
        1 gccagcagca gaaggccggc gccccggata ccgtgctccg gcatcccgac accaacgcac
       61 cctttgcggc ccggctcgac tgggcccggc aaaccggccg ggaacgccga ggcggaaact
      121 actgggtcgg gtatatcgtg accggtagct ccgcccccgc cgggtgggtg tatttcgacc
      181 ggcatgagcc gatcagaacc ggagacgtca cgctctacgg acaggtgcgg atcagcggac
      241 cggatcagct gtcgttctcg ggggtagagc tccgaccgtt actgggtgag tatgccggcc
      301 aggacctggc gatctttctg ggctatgagt tggtgaacgg gcggccggca ctgagccgga
      361 tccacgtcgg cagtttcggg ctgccggtgc acttcggagg ctggagtctg gtctggctgg
      421 gtacggtcac cgacgccgag agcgtcgagc tggttcgcgg gctgtaccag tcggccggat
      481 cgaccgagct cgccaaggat gtcgttgcca cggtgggggt tcatggcacg tctgcggtcg
      541 ccgttaccgc cttgctcgaa tggctcaaga gcagttcgcc cgaggccatc cggcaggagg
      601 ccgccgagtg gctggcccac catgacgatc cccgcgtgct gcccgccctg agccgcgcgg
      661 tctggaccga cggctcggac gcggtgcgtc aggacgccgt cgaagccatg ggcagcgtgg
      721 cccggagcgc cgccgcggac acgatcatcc gcatcgcgcg gacccatccc gaccactcgg
      781 tgcggcagga agcggtcgaa accctgggcg agcgggaaga accggccgcg ttcaacgctc
      841 tgatctcgat cgctcgcgat gaccacagcc gtgagatccg aatggaggcg atcgaaacgc
      901 tgggcgatct gaaggacggg cgcggggtct ccatcctcat ggagctggcc cagtcccatc
      961 cagacgacgc gagccggcgg gaagcggtgg agaccctggg cgatgccgcc cccgaggcga
     1021 aaacggtcga gctgctgctc cgcatcgcca gcgccgaccg gtccttggcg gtgcggcggg
     1081 aagcggtcga gactctgggc gatatggagg aggttccgga ggcgcaacgg gcgctgcgcg
     1141 acctgatcga gcggcatccc gacggcgagg tccagaaaca gggcgtggaa tccatggcca
     1201 actcgcccgg atccgatgtg ctggagacgc tccgggatgt cgcccgcact catccgaaag
     1261 cggacgtcag acgagaggcc atcgacgggc tggctcgcct ggacgaccct aaggcggtcg
     1321 aggcgctccg gagcatcgcg ctcaccgatc ctgatgtgtc gttgcaggcc gcggcggccg
     1381 aggcgctggg agaggcgcat ccgcatgagg ccgcgctcaa ggcactccag gagatcatct
     1441 ggcaacaccc cacacccgac gtggcccgag cggcggtgga ggcattggcg gacctagagg
     1501 gtcccggagt gaccgagttg ctgcgggagg tcatccggcg gcatccgtcg atcagcgtac
     1561 agcgggaagc ggttgatgtc ttgaccaggc gctgaagcga ctgacctcgg cagtgacttg
     1621 acggcggtga tggccgggcg acctttcgag ggtgcccggc catcgtgttt cgcctggtct
     1681 tacccgccgc cgttttgtga cggccacgac cgcagtactc ggcgcagagg tgcggttccg
     1741 ccgacccacc gcaccacccc aattgagccg gcccatccct tctcccagcc aactccagtg
     1801 gcagcaggac gagctgtcgc tctttctcca ttttggggtc aacactttta ccgaccggga
     1861 gtggggcgac ggaaaagagg atcccgcgat ctttgctccg tctcgactcg acactcggca
     1921 gtgggctcgt agcgcgaggg cggccgggtt ccgcgctctg atcctcaccg ccaaacacca
     1981 cgacggtttc tgcctctggc ccagccgcac cacccgtcac tcggtcgagt cgagtccctg
     2041 gcgcgggggc cggggcgatc tggtccgcga gttcgtggat ggatgccggg ccgagggcct
     2101 gcgggcgggc ctctactgct ccccctggga tcgcaacgcc tcgtcctatg gagattcggc
     2161 ccgctacaac gacctctact gtgaccagct cactgaattg ctgacctggt acgggccgat
     2221 ccacgaggtc tggttcgatg gggccaacgg cgaaggtccg aacggcaagc gccaggcgta
     2281 tgactggccc cgctttttcg gtctcgtcaa acgccttcag ccccaatcgg tgatcttctc
     2341 cgatgccggg cccgatgtcc gctggatcgg caatgagcac ggcgtagccg gcgacccgaa
     2401 ctggtccacc gtggacccgg aggcggttcc ctaccctggc gccaccggag agcacgtgat
     2461 tcgggccctg cagcaggggc atcccgcggg cctggtgtgg cgcccgggcg aatgtgacgc
     2521 ctcgatccgg ccgggctggt tctaccatcc cgccgaagac gagaaggtga agaccgtgcg
     2581 gcagctggtg gagctctact tcacctcggt gggacgcaac tcgaagctgc tgctcaatgt
     2641 gcctccaacc cgggaaggtc tgctgtcccc aaccgatgtc gcgcggctgg agggcctgga
     2701 gagggaactt cggtcgcgct tcagccggga tgccgcaagc ggccggcggc cctcatggcg
     2761 cagcaccgga gcccgaacgg ccatcgccga gctcgacctg ggccggagcg tccggctggg
     2821 gatctgcggt ctgggcgaag acatcgctca ggggcagcgg atcgccagct atcgcgttga
     2881 aggctcgaac ggcggtgact ggcagaccct gtcacggggt tggaccatcg gctaccgcaa
     2941 actggatcgc tttgagccgc gatcactcgg gcgggttcgg ctgctcgtcg acgaggcggt
     3001 cgacaccccc cacccggtcc agatcagcct cttccccggc gagtagtgtc gtccaccccg
     3061 aaccccaccg gagcagaata gaccatgccc ctcatcatcc gctccaccgg ctccgccctg
     3121 cacacggcgg cgcgcggcct gttgatcatg atcgggttcg gcctggtcgg ggccgtgctc
     3181 aactggggcg tgctgctcgg cctggcggcc ctcgccgggc tgttgccggg gggatcacca
     3241 gcgaccggag gtgtgggagc gttctcggtc ggattcctgg tcctgctgtt aggtctggga
     3301 ttcccgctcg cctggttcat ggcggcgcaa ccgatggcgg cggcatggag cgcgcgccat
     3361 ttctaccagc gacacaagga cgacgtgatg ggcgccatcg agcgagccct gcaatccgag
     3421 ctgggcgacg aggacgccgc cagcatggaa cgctggtccc tgaccatcgg tacactgcag
     3481 cagagcctcg agcagcagca gccccgtccg ctccgtcccg tgatccgtct ggcgctcaag
     3541 caagccggga tcccggagct ggaggcggcg gttcgccagg gatcggggcc actgcccgcg
     3601 cggctggctc aggcggtcgc ccaccggttc gaggaccagc tcgccggccg cgggaccatg
     3661 tggctgtggg tggtcttcgc ggccaacgtc gttgccgtgg ccgtggtcat tcttaccctg
     3721 agatgacccc tcgggaattg ccgcgcccga tcgacttcac ggattcccag gcgcgggatg
     3781 ggttcctggc ggtgatgcca gactgattgc gaccccgacc agaaccacgg tgagggcgcc
     3841 gacgacgttg tgccacagaa acgagaccga cggcaggccg aaggtgacgg cggccaccgc
     3901 ggccatgccc gcgaccagtc cgagaaaggc acccgagggg cgcgcccggg ggatcatcgc
     3961 cagcaggaac acccccagga tcgagccgta gaagaaagac ccgaagcggt tgaccacctc
     4021 gatcagcgag cccagcgaca cggcgtaggt cgcgatcacg caggcgaaga tcccccagac
     4081 gccggtcgcc agcttcgaca cggccaggta atgggcgtca gtgccctggg gccggaacca
     4141 gcgccgatag aagtcgatca ccgtggcggt ggagagcgag ttgagctcgg cagcgatgct
     4201 cgacatggcc gccgccatca ctccggcgat gaagaggccg gccagcccta acgggagctc
     4261 atccagcacg aaccggggga tgatgtagtt cacgtcgcgg gcgggctggc cggtgacccg
     4321 tgccgcgagc tgcagcgcct cgttacgcac ggtggtgacc tgggcctcgc gctcccgcag
     4381 agcctggtcg gcagcccggg aggtcggctc gttgtccgat cctccgaggg aggccaccgt
     4441 gtgggccgct gcttgctgct ccccgagcgc ggcggtgaag cgctggttca aggccgcgaa
     4501 ggcggcgggt tcggccgcct ccacctggcg ctggtgcgcc ggattgaaca gcagcggcgg
     4561 tgcccgaaaa aggtagaaca cgaacaccag caccccgacc agcagcacca gggcctggag
     4621 ggggatcttc cagtaggcgc tcatcagcag cgagctgcgg gcttcgttca ccgacctcgc
     4681 cgtcaggtac cgctgcacct ggctctgatc ggtcccgaag taggagagca tcagaaaagt
     4741 gccgccgatg atgccggacc agaaggtata ggtctggctc aagtcgaaag agaaatcgaa
     4801 gggacgaagc cggccggccg cgcccgcgac ctggagggct tcatcggggg acaccggcag
     4861 tcgcagcagc aggaccacca ccaccgcgac cagcgccacg acgatcagga ccatctgctt
     4921 gacatcggcc caggtgaccg cctgcacccc gccgaccatg gtgtagatga ccgtagggaa
     4981 cccgatcagc gccaccgacc acaccacatc ccacccgaag atggccgaga agatcaccgc
     5041 gggagcagcg atgatcgtgc cacaggacat cccgcgcgaa atcagaaaga ggaagctggt
     5101 cagggagcgg gtcttggcgt cgaaccggcg ctccaggaac tcgtacgccg tgaaaacccg
     5161 ggcgccatgg aggaacggca ccagcgtgac tcccagaatc accatggcga tagggagccc
     5221 gaaatagaac tggatgaacc gcatcccgtc ggttgcaccc tgcccggtcg taccgatcat
     5281 ggtgaccgcc gagagctgcg tcgccatgac cgagagcccg accgcccacc agggaaggtt
     5341 tcgaccggcg agaaagtacc cttcgattcc gcgggtgccc ttggcccgtc gcaccccgtc
     5401 caccacgacg tagacgaggt acgcgacgac gatggcccaa ttcagcgggt gcacggatgg
     5461 tcgctcagcg ggcgtaccgc gcctggagca gccagagggc caacagggtc aggacctgaa
     5521 ccgccatgac ccggaacagc gtgcggcgga atgaatccat ggttccgaga gctcggttgg
     5581 cggtggaacg tacgaggacc caccttgcgc ggcaatgccg gactgctcag tctccaccga
     5641 tgctttggcc gtctttccgg agactcggcc ccgttctttg cggggcggtc ctgaccgtgc
     5701 tggtgctcgg gtgccgggac cagccgccgc ttccgccacc cgatccaccc ccgcctccgg
     5761 cgccggccgc gccgaccccg gcgggtggcc ggttcatcgc gagctacggc gtcgcctctc
     5821 cgctctaccg gcagttgcgg cagtcgctga tggcgagccg gctcctcgat accctggtga
     5881 ccggtctcaa cgacacgatc cgggtgagag aaaacgtggt gctggccgcc accgagtgcg
     5941 gggagcccaa cgcctactac cgtcccgaag cccggcgggt ttcgctctgc tacgagctgc
     6001 tcgaccagct gacccgccgc tacagccgcg cagagggaag cgatctcctg attgcgggga
     6061 ccttcgcctt cgtcctgctg cacgagctgg gacacgccat ggtgcacctc ctcgatctcc
     6121 ccatcaccgg tcgggaggag gacgcggccg accagttcgc cacgttgctc atgttgcgag
     6181 aaggggccgt gggcgactca ctggcgttcg ccgtcgcgac gatgtttgcc cagcaggccg
     6241 agtccgtggc gttcgaagac ctggcttttg ccgacgagca cggcctggat ctgcaacggg
     6301 tgtacaacat cctctgttgg atccatgggc gtgccccgga gcgctacccc gaggtggtga
     6361 gggagggctg gctcacggag ggcagagcgg agcgatgccc ggcggaattc aaccggatcc
     6421 gagccagctg gcgccggctg ctcgctcccc atctcaaggt gaggtcggac agcggaccga
     6481 tcccgtaccc ctgaccgagc cggaccggat tcccggtcag gcccgaagcg ccacgatggg
     6541 atccacccgg ctggctcggc gggccggaag caggctggcc gtgagcgtca ccagcatcac
     6601 caccgctccc accgcgacgt aaaccagtgg atcggttcga ctggtcccgt gcaacccgct
     6661 ttcgatggga cgaatcgcca ccgaggccag cggcagtccg atggccaggc cgatcgcggt
     6721 gagacgggcc gcatcgacca gcaccagcgc ggtcagcctg ccgcgggtgg cgcccagcgc
     6781 gcctcgcacg cccagctcct gggtgcgacg accgacggta taggatagca ccccatatat
     6841 gcccatcagg gcgaggccca ggcccaccag cgcgaatccg agtatctgca gggcattcac
     6901 ccgcaccccg ctcaactgat cgtcgacccg ctccgacgag cgagtggcga acaccggccg
     6961 gtccggcacc aaccgcgcca ggagctcgcg ggtcggccgc agcagcgccg ccgggcttcc
     7021 gctggcccgg atcacgaagg ccgggaaggc cgacggcgct tgctcgtagg gccgatagat
     7081 ctcggcgcct tcatcggcca gcaacaggtt ctgctgggcc gccttgttgt cggcaaccac
     7141 tcccaccacg gtgagggtga gcggcggcgc cccgggaagc gtatccaccc ggaaagtgcg
     7201 gcccaaggcg tcatcacccg gccaccagcg ccgtgcggcc caatcgttga tgatggcaac
     7261 aggttgggtg tgctccagat catgcgagtc aaagtcccgg ccccgaagca cccggatgtc
     7321 gagagcgccg aagtaacccg gcgtgaccgc gaatccgctc gagggcacca gtcccggcgg
     7381 taagggctcg gcctggccct ccagcaccac ccgcggtgac gcgccccgag gcccgagcgc
     7441 gacggtcgac cggaccgcgg cggactcgac cccaggcagc tggagcaatt ccgcggtgat
     7501 ctggcgggtc accggaagaa accgctcttt cacccgccag ggatggggaa agctgggaga
     7561 gccttccacc agtctttccg gatcgaaccc gaggtccacc cgggacagcc gcaccaccgt
     7621 tcgcgccatc agtcccgcac cggttaacag aatgacggcc agcgtgatct gcgccaccac
     7681 gaacacctgc tgcaaccgga tgccgcgccg ccccccggtc gtcgtcggag cgccgtcgcg
     7741 cagcacgccc tgcacgtcgg tccgggacgc cacccgcgag gggaccaggc tcaggagcgc
     7801 gccgatcccc agcgccagca ggaccgtgaa cccgatcacc cgggcatcga ggcggtattc
     7861 catccccgaa ggccggagcg agcgcatcgt gtcgagcgac ccgagccggc tcaacagcca
     7921 ggcggacagg accatgccga gcaccgcggc actcaacacg atcacgacct gttgcgcgaa
     7981 ttgctcccgg acgatccgcc cgctccgggc tcccagcgcc gagcggatgg cgaactcccg
     8041 ctgctggtgg agcgagcgga ccagaaccag gttggcgagg ttggcgaccg cgatcagcag
     8101 aatgcatccc acgatcgcgg cgaagatcag gtcgtgggcc tgggtcgatt cggagtagcg
     8161 ggtccggagc ggagccgctt ccagcttcat cggggtccga tccttcccag tgccggcgat
     8221 gaccgcccca tccagggtcg ccagctcacc ccgcagttgg gccaggctca tccccggggt
     8281 cagccgcccg atgaccgtga gagaccggat cgaaggccgc gtgctcggat ccagtgtcgg
     8341 caccacggga agccagaatt ggctctgaac ttcgtggttg aatcccgaag gcatcacccc
     8401 cacgaccgtg tagtcggtgt cgctgagcct gatggaacgg cccacaatgc gaggatcggc
     8461 ctcgaaccgg ctggtccaga gttcgtggct cagcaccacg accgtcggaa cacccaggcg
     8521 atcgtcctcc ggggtgagcg agcggcccag caccggccgc acctgcagca agtcgaacag
     8581 attaggggag accacgccgc caaacaccag gatcgggtcg ccacccaggt tgagcgcctt
     8641 gccgcccccg gtgtatccgg cgaccagatc gagcgagtgg agtggcgtgg tccggagcac
     8701 attggcgtag gtctcgtagg acacatcgca cgcggtgcgg cagccgccgg gagagccttc
     8761 caacggcacc tcgctcagca ccaccagccg gtcgccgtca ggaaagggca gcgcgcggag
     8821 tcgcacggca tccagaacgc tgaacgcggc cgcgctggcg ccgatggcaa tcgccagcga
     8881 caggacggcg gtcaccagga atccggggct tcgggccagc gcccggagag cagttcggag
     8941 atcgaagtgg aggaacatgc tcatcaggtg ggtgaggggg cagaataatg tatcgcctga
     9001 cgtacggtcc cgctcatgct gtcaacctct caggttctac tggcccgcga acaggtcatc
     9061 gatcggttga acaccttgtt catttcaacc gatatccgag actgggccgc ggtccgggcc
     9121 tgtttcgccg ccacggtcca tttcgacatg acgtcgttgg ccgggggcga tccggtgatc
     9181 ctgacccccg aggccatcgc ccgggcctgg gagcaggggc tcgcctccat cgagagcgtc
     9241 caccaccagg ccggcaacta ccgggtgacc ctggatgggg acgaggctat ggccttctgt
     9301 tacggcatcg ccatgcacta tcgcccgacc aggtcgggga agaatacccg gacctttgtc
     9361 gggagctacg aattccggct caagctcatc gggggcgact ggcgcatcac catcttccga
     9421 ttcaatctca aattcctcga cgggaacatc gagctggaga aggaaccctg atccggcccc
     9481 tgaaagccgt acgatcccat tccgtatgag tgaaccgccg ggtcagaagg ccgcgatcag
     9541 tgcggtgatc ccgaatccgg cgaccaccac cccggaaccc cggttgatcc accgcagccg
     9601 ttccggtgtc atccggctgc gcgccaggct ggccccgccc gagaggagca gccaccacgc
     9661 ggccgagccg acgaacaccc cccccgacca gccacccgac cgaaaggcct ccggccccca
     9721 gcccggcgcc gacacccagc cccgcgaacg tggcggcgaa ggacaatacg gtcatcgggt
     9781 tggcgagggt cagaaagagc cccgtcacga aggtccgggc attgcctgcg tcggcccctc
     9841 ggcccggctg aatcacgggc gaggcccgca tcgttcgcag gcccagccag aggagaaaca
     9901 gaccaccccc cagtcgcaac caggtcgcat gactgaccag taacgttgac accgctgtca
     9961 gccccaggcc gccaaccagg ccatagagcg catccgcggc ggccgcgccg agccccgtca
    10021 tcaggcccgc catgcggccc gacgtgatac tgtgccgtat caccaggacg ccgatcggcc
    10081 cgaccggggc ggcgaccgag aaacccagtg ccatgccccg ggccaatagt gaccagtcca
    10141 tccccgcgtc ctgaaaaaga aaagcccacc aggcctgaga cctggtgggc tgcgagcgta
    10201 ccgccgtcaa cgcgccgcta gccagggctc cgggaggaga actgggtctg ctgctgcgcg
    10261 ttctggcgca gggcgagggc ggacgaattc actggagttc gcattggcgg gggaatacag
    10321 tcgtgagtct tctccagccg caagggagca ggcagcaggg agcagggagc agggagcggg
    10381 cagcaggcgg tcgccagcgc caaggcgagg gcgatcaccc cgctattcta gcgtcggccc
    10441 agacgggtgg ccagctccag cgtcagcgag agggtcgatt gcttgccgcc gctcagcaca
    10501 tggctctgca acgcatgttg gggcatcgcg ggcagcaggc ttcgagtcca tcgcaacccc
    10561 agactcgctt cgcgcagctt gagcgctcct ccgaccacaa aaccggcgtc gccgttgtcg
    10621 aaccgggccg gcgccagctc gtcgcaaccg tagctgacgc gtgcgaccgc cgtctgcgag
    10681 gcggtctcgg agagcgggac cggttgatca tcgaactccg acgagacgct gcatcccaat
    10741 cgcacggcga caaacggccc ggcatacagc cgcggcacca agccgttgcg cgaggtggag
    10801 agcgacacct gcatcaggag cggcacttcc agccaggtca gtgacgtggt ctccaacggt
    10861 tcaacattgg aacacaaaac cgtgatggga cagggatcgt ccaggatgat gcccgcctgc
    10921 ctggttccga cccgcttcca cgataccgag gcttcggggc ggaaactcaa gtaccggctc
    10981 gccgggaagg ccgcaaacag accgacttgc ccggtgtaac gggcctcgac cggtcccacc
    11041 cccgtcatgg tgttgcggtt gacaccgccc accactccga aatcgaaccc gcgctgagcg
    11101 gcggccggcg aagccaggag cgggagcagg accaggagct gattcgggga cggtgatcgc
    11161 atcgggtact cccgcggtgg ttgaccaatc acttcgatcg caaccccaat gccaccgtga
    11221 agggctcatt ggaactctcc ggcgccgctt cccggtcaag ctgtgtcact ttcacacgcc
    11281 gctggcgtgg cagtacgttc cgggtcgaca cccgatgagg cgccaccatg acccgccttc
    11341 cgaccggagc ccagctccgg gttcatgaca gcatcagccg catcccgggg tcgcacggcg
    11401 agcgcttcgt cgagctgctg cggcacggga ccctggccgt ggaactgtat gctccccgcg
    11461 gcgaggaccc gcagagcccg cacgatcggg acgaggttta tgtggtggtg gaaggccgag
    11521 gggacttcgt gtgcggagac atgcgccggg tcttcggccc gggcgacctg ctactggtgc
    11581 cggcgggcgt agttcaccgc ttcgagcact tcagcgatga cctgatcgtc tgggtgatct
    11641 tctacggtcc catcggcggc gaactcgatt gaacagcctc tcactcagta ctcagtactc
    11701 agccctagag ttggatcggc agctgccgga tccgctgccc ggtcagtgcc gccacggcat
    11761 tcgccaccgc cggggcgatc ggcggcgtgc cgggctcccc taccccgccg ggcgcatcac
    11821 cgctcggcac cagatgcact tcgatgaccg gcatctcgtc cagccggagc acgggataat
    11881 cgtggaagtt cgactggacc acccgcccac cggcgatggt gatctttccc ttgagcgccg
    11941 cgctcagacc atagacgatg ccgccttcaa tctgcgccac cacggtgtcg ggatggacca
    12001 ctacgccgca gtcgaaggcc gcgaccaccc gtcgcacccg gagcccgccc gtctcgatcg
    12061 ccacctcggc gacctgagcg caccagctgc cgaacgactg gtgcaccgcc acgccccggg
    12121 ccgtgccgtt gggcaggggt gagccccagc cggcccgctc cgccacgacg tccagcaccc
    12181 gccggtggcg cgaatcatcg ggcagcagcg accggcggaa tgccaccgga tcctggccgg
    12241 ccagtgcggc cagctcgtcg atgaaggtct ccaccacgaa ggccgtgtgg gtgttcccca
    12301 ccgagcgcca gaacccgacc ggcaccccga ggtcggcctg ggtgtaacgc acctcgatgc
    12361 tgggaatctt gtagggaagc tcccgggccc cctccaccgc cgtcggatcg atgcccccct
    12421 tcatcggacc cgccagccgc atgatgggac cgggaacgaa gcccggaatg aagcgcgaga
    12481 tgatcgacgg cgccacgaca tggtggtacc aggcgatggg ggcgcccgcc tgatcgagtc
    12541 cggccgagag ccggtggtag ctcaccggcc ggtagaaatc gtgctggatg tcatcctcgc
    12601 ggctccacac caccgatacc ggccggtt
//
LOCUS       DASWKS010000580         2026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2534655, whole genome shotgun sequence.
ACCESSION   DASWKS010000580 DASWKS010000000
VERSION     DASWKS010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2534655"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..>2026
                     /locus_tag="VGA78_16535"
     CDS             16..>2026
                     /locus_tag="VGA78_16535"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HEX9895539.1"
                     /translation="MIFKQSRLLPLLLLSLGAPISLRATDRPTDRQTVQHPDPTVVVR
                     RIASTVQLAAQEYGLGVSNGKVVLAAEVEEARLFLTEAGRSAGMLPDSVRRVAQADID
                     RILAMVKGVAPAESVTAAAHAFVAGLGNRFQIVLDDIPPQIPALARGASVYQVQCARC
                     HGQLGRGDGPDGAGLDPAPANLTLAAALRDASPLDFYRRVTVGVAGTGMPAYEQALST
                     DDRWAVALYASTLRLPVAEGKVPAALTPFPTTARLSDGQIMQSLGPDATLGQVAAVRA
                     AQATAVADASRAAAVFDSVRRTVANAAGFAARGEHEAARQAAFDAYLVFEQVERDVRA
                     KDPRLAGEAEAAFAALRESALTGGPAWESARRSLDAVLERAERVVSDRLSPFNLFLQS
                     LIILLREGLEAILVIGALMAFLVKTGAGQRRRDIHIGVGAAVGASLFTAFVIETVFRL
                     STARQELLEGITMGAAAVMLFYVSYWLLTKVEVARWNAFVKGKVQDAVSSGSALALAT
                     VAFLAVYREGFETVLFYKALMVSGGTGGLVPILTGMGGGAVALAGVYVAVNRFGVRLP
                     LKPFFAVTSAFLYYMAFVFAGQAVAELQESGLVGTTFVSGGPRLPPLGIYPTVESLAA
                     QGALIGLAVLALIWLFGISPVFRKPAAAPAVVSQARTDREVVRSLE"
BASE COUNT          273 a          649 c          739 g          365 t
ORIGIN      
        1 caaaacgatt tgagaatgat tttcaagcaa tcgcgactgt tgccgcttct tctcctgagc
       61 ctgggtgcgc ccatttccct cagggcgacc gaccgaccga cggaccgaca gaccgtccag
      121 caccctgatc ccaccgttgt cgttcgacgc atcgcctcaa ccgttcagct cgcggcgcag
      181 gaatacggct tgggggtgag caacgggaag gtggtgctcg cggccgaagt ggaagaggca
      241 cggttgtttc tcaccgaggc cggccgcagc gccggtatgc tccccgattc ggtgcgccgc
      301 gtggcacagg ccgacatcga tcggattctc gccatggtca agggggtcgc gcccgccgag
      361 tcggtgaccg cggcggccca cgcgttcgtg gccgggctcg gcaaccgctt tcaaattgtg
      421 ctggacgaca tcccacccca gatccccgcg cttgcccggg gggcttcggt gtatcaggtg
      481 cagtgtgccc gctgtcacgg ccagctgggg cgcggcgatg ggccggatgg cgctggtctc
      541 gatcccgcgc ctgccaacct gactctggcc gccgcgttac gcgatgcctc gccgctggat
      601 ttctatcggc gggtgaccgt gggtgtggcc gggaccggca tgccggccta cgagcaggcc
      661 ctgagcaccg atgaccgctg ggcggtggcg ctctatgcca gcacgcttcg gttgcccgtg
      721 gccgagggga aggttcccgc cgcgctcacc ccgtttccaa ccaccgcgag actcagcgac
      781 ggccagatca tgcagtcgct cggtccggac gcaaccctgg ggcaggtggc cgcggtgcgc
      841 gcggcccagg cgacggcggt cgcggatgcc agtcgagccg cggcggtctt cgactccgtg
      901 cggcgtaccg tggcgaacgc cgccgggttc gccgccaggg gagagcacga agccgcccgc
      961 caggccgcgt tcgatgccta cctggtgttc gagcaggtcg agcgggacgt acgggccaag
     1021 gatccgcgcc tggcgggaga ggcggaggcc gcgttcgccg cgctgcgcga aagcgcgctg
     1081 accggtggtc cggcgtggga gagcgcccgg cgatcgctcg acgcggtgct ggaacgggcc
     1141 gagcgggtcg tgagcgaccg gctgtcgcct ttcaatctgt tcctgcagtc gctcatcatc
     1201 ctgctgcgcg aagggctcga ggccattctg gtcatcggcg cgttgatggc ctttctggtg
     1261 aagaccgggg cgggccagcg gcggcgtgac attcacatcg gggtcggggc ggcggtgggc
     1321 gcgagtctct tcaccgcttt cgtaatcgag acggtgttcc ggctctcgac cgcgcggcag
     1381 gagctgctgg aaggcatcac catgggcgcg gcggccgtca tgctcttcta cgtgagctac
     1441 tggctcctca ccaaagtgga agtggcccgc tggaatgcgt tcgtgaaggg caaggtgcag
     1501 gacgccgtca gcagcgggtc ggctctggcc ctggcgacgg tggcgttcct ggcggtgtat
     1561 cgcgaggggt tcgagacggt gctcttctac aaggcgctga tggtgtcggg tgggacgggt
     1621 gggctggtac cgatcctgac gggcatgggt gggggagctg tggccctggc cggcgtctat
     1681 gtcgccgtca accgcttcgg ggtacggctg cccctcaagc ctttcttcgc cgtcaccagc
     1741 gctttcctct attacatggc attcgtgttc gcggggcaag cggtggcgga gcttcaggaa
     1801 agcggcctgg tcggtaccac cttcgtgtcg ggcggcccgc ggctgccgcc cctggggatc
     1861 tacccgacgg tcgagtcgct ggcggcgcag ggcgcgttga ttggattggc cgtgctggcg
     1921 ctgatctggc tcttcgggat cagtccggtc ttccggaagc cggccgcggc gccggccgtc
     1981 gtctcgcagg cgcgcaccga tcgtgaggtc gtccgatccc tggagc
//
LOCUS       DASWKS010000581         3397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_678482, whole genome shotgun sequence.
ACCESSION   DASWKS010000581 DASWKS010000000
VERSION     DASWKS010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678482"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..788
                     /locus_tag="VGA78_16540"
     CDS             282..788
                     /locus_tag="VGA78_16540"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX9895540.1"
                     /translation="MSKTLTVRGVPDAALRALRSSAAANRRSLNSELLLILERAASET
                     RAEAERPRVRESAVPAYQPGRKPAGPSLAAEVDRAALAAVCRRLRIMRLALFGSQARG
                     DARFDSDIDVLVDFEPGMTPGLGIVTAAEALRPVLGGRRVDLVTRRGLRPALLERILA
                     TSVPLCGA"
     gene            778..1113
                     /locus_tag="VGA78_16545"
     CDS             778..1113
                     /locus_tag="VGA78_16545"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HEX9895541.1"
                     /translation="MARDDRLTLEQMLDTVRRIRAMVRGRTRAAFEDDEVRQLALLHL
                     IQLLGESASRVSADFRDGHPELPWGPMVGIRNRIVHGYDHLDPDIVWRVANEDLEPVL
                     AALERILAG"
     gene            complement(1160..>3397)
                     /locus_tag="VGA78_16550"
     CDS             complement(1160..>3397)
                     /locus_tag="VGA78_16550"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895542.1"
                     /translation="AVILALASVVVLATVWFLVRALGLPDWVFLGAIALLAAGIPIMW
                     FTGRHERRRAVARSTGLHLPPPSGLTRHLTWRRTVMGGVGAFALLGVLTAAYMGMRVL
                     GVGPVGTLMGRGALAERERILLAEFENGTSDSSLGATASQLLRIDLAESPALSVYDAS
                     QVAAVLQRMRLDRATRVDFEMAKEIATREGIKAVLAGDVRPLAGGYVLSARLVNVGTS
                     EVLWAGRQDVTGPDGLSAGITRLSATLRERVGESLRSIRAASPLDQVTTRSTDALRSY
                     IESQRAVERGDENLALALLERAITQDSLFAMAWRRLGIILRNQNADSTRFNLAFRRAY
                     ELRDRLSTRERYHTEAAYAGFLKGDTTAAIAAYQAVLAKFPDDRAALNNLGVFYNGQG
                     READALAVYKRSIALGGAPQNTYGNAVPLEYQLGHPDTARALLAKFAEAYADHPQPQL
                     LRANLAAAMEEYDTAQAIFERLRVLLRGNARWEPQVMNGLQNLHRTRGRLEEALRLAT
                     ESSRLFLQRNPTYAPGLVRQEITEAYRVGTEAEFALVFMADVERARQLHDRAERTVPR
                     ERLPVGDRNWLGLVDFYARIGALDRAREAVARWERDVSDSVRRDPPPARLRADAQLAA
                     AEGRYDEAIATFRRIRDRLPGCLGCELFSIGEAYDRSDRPDSAIAAFERLLAIRQLGT
                     GPYRKPVLFRRLGQLHEKQGNRERALEYYGRFVDLWKDADPPLQPLVAETRQWIAQLA
                     GERSR"
BASE COUNT          534 a         1195 c         1119 g          549 t
ORIGIN      
        1 cggaggacct cggacttcga gaccccccac cgccgggcgg tgcgctcgag caaccggatg
       61 gtgtccgggt ccaacgcgta cgtggatttg atcgatgatc tggccatact ctcaaagtat
      121 ggccatacca gtccctagac aatatcgagc tggcttggca ccaccttcga gtcatcctcc
      181 agccgggcag cccgcccacc gactggtatt tgacttaggc tggggaagca tcggtttcaa
      241 ccatcttgat aatgactgca tagtgccatc atattgtagt catgtcgaag acccttaccg
      301 tacgcggcgt tcccgacgcc gctctgcggg ctctgcgttc gtccgccgca gccaatcgcc
      361 gaagcctcaa tagcgagctg ctgctcatcc tggagcgcgc ggccagtgag actcgcgcgg
      421 aggctgaacg gcctcgggtc cgcgaaagtg cggtcccggc ctaccagcca ggacgcaagc
      481 cagcaggtcc atccctcgcc gctgaggtgg atcgcgctgc gctcgccgcc gtctgccgcc
      541 ggttgaggat catgcggctg gccctcttcg gatcccaggc caggggcgat gcgcgcttcg
      601 acagcgatat cgatgtcctg gtcgatttcg agcccggcat gacgccgggg cttgggatcg
      661 taaccgccgc cgaggccttg cgccccgttc tgggcggccg acgcgtggat ctcgtcaccc
      721 gccgcggact ccggccggcc ctccttgagc gtatcctcgc cacctcggtg ccgctctgtg
      781 gcgcgtgacg accggctgac gctggagcag atgctcgaca ccgtccgccg gattcgcgcg
      841 atggttcggg gccggacccg agctgccttc gaggacgacg aggtccgcca gctcgcgttg
      901 ctccacctga ttcaactgct gggcgagtcc gccagccggg tatccgccga cttccgcgac
      961 ggccacccgg agctgccctg gggaccgatg gtcgggatcc ggaaccgcat cgtccacggg
     1021 tacgatcacc tggatcccga catcgtttgg cgcgtggcca acgaggatct cgaaccggtg
     1081 ctggccgcct tggagcgaat cctcgcaggg tgacggcggc cgcgagcgca gattcgtcgc
     1141 gaatcaggat tgacctgtgc taccggcttc gttcaccggc tagctgcgcg atccactgcc
     1201 tggtttccgc taccagcggc tgcaatggcg ggtcggcgtc cttccacagg tccacgaacc
     1261 tgccgtagta ctcgagcgcg cgctcgcggt tcccctgctt ctcgtgcagt tgccccagcc
     1321 gccggaagag cactggcttc cggtatgggc cggtgcccag ctggcggatg gcaagcaggc
     1381 gctcgaaggc ggcgatggcg gaatcgggcc ggtcgcttcg gtcgtatgcc tctccgatgc
     1441 tgaacagctc gcaccccaga caacccggca gccgatcccg aatccggcgg aaggtggcga
     1501 tggcctcgtc gtagcgccct tcagccgcgg ccagctgagc gtcagcccga agtcgggccg
     1561 gcggcggatc gcgccggacg ctgtcgctca catcgcgctc ccatcgggcc acggcctcac
     1621 gggcgcggtc cagcgccccg atcctggcgt agaaatcaac caatcccagc cagttccggt
     1681 cgcccaccgg gagtcgctcc cgcggcaccg tgcgctcggc ccggtcatga agctggcggg
     1741 cccgctccac gtcggccatg aagaccaggg cgaactccgc ttcggttccg acccggtagg
     1801 cctcggtgat ctcctgccgg accaggcccg gcgcgtacgt cgggttccgc tgcaggaaca
     1861 accggctcga ctccgtggcc agccgaaggg cctcctccaa ccggcctcgc gtccggtgca
     1921 ggttctgcag cccattcatg acctgcggct cccatcgtgc gttgccgcgc agcagaaccc
     1981 gcagccgctc gaagatggcc tgggcggtgt cgtactcctc catggccgct gccaggttgg
     2041 cccgcagcag ctgaggttgc gggtgatcgg cgtaggcttc ggcgaacttg gccagcaggg
     2101 cgcgggccgt gtcgggatga cccagctggt actccagcgg gaccgcgttg ccgtaggtgt
     2161 tctggggagc tccgcccagg gcgatcgacc gcttgtagac cgccagcgcg tcggcttccc
     2221 ggccttgacc gttgtagaac acgcccaggt tgttgagcgc ggcccggtca tccggaaact
     2281 tggcgaggac cgcttgatag gcggcgatgg cggcggtggt atcgcccttc aggaatccgg
     2341 cataggcggc ttcagtgtga tagcgctccc gagtcgagag ccggtccctg agttcatagg
     2401 cgcgccggaa agccaggttg aagcgcgtcg aatcagcatt ctggtttcgc aggatgattc
     2461 ccagccgtcg ccaggccatg gcaaagagcg aatcctgggt gatggcccgc tccagcagcg
     2521 ccagggccaa gttctcgtcg ccccgttcga ccgcgcgctg ggactcgatg taggaccgga
     2581 gcgcgtcggt cgagcgggtc gtcacctgat cgagcggcga ggcggctctg atggaccgga
     2641 gcgattcgcc cacccgctcc cggagcgtgg ccgagagccg ggtgatcccg gccgagagtc
     2701 catccgggcc ggtcacgtcc tgccgtccgg cccagagcac ctcactggtg ccgacgttca
     2761 ccagccgggc cgacagcacg tagccgccgg cgaggggacg gacatcgccg gccagcaccg
     2821 ccttgatgcc ttcgcgggtg gcgatctcct tggccatctc gaagtcgacc cgggtagcgc
     2881 gatccagccg cattcgttgc agcactgcag ccacctgcga ggcgtcgtag acgctcagcg
     2941 cgggcgactc cgccagatcg atccggagca gctgcgacgc cgtggcgccg aggctggaat
     3001 cggaggtgcc gttctcgaac tcggccagga ggatccgctc ccgctccgcc agcgcaccgc
     3061 gccccatcag cgtgcccacc ggtcccacgc ctaacacccg cattcccatg taggccgcgg
     3121 tgagtactcc gagcaacgcg aacgcaccaa ccccgcccat cactgtgcgg cgccaggtga
     3181 gatgccgggt cagccccgag ggcgggggca ggtgcagccc ggtagaccgg gccaccgccc
     3241 gccgccgctc gtgccggccg gtgaaccaca tgatggggat ccccgccgcc aacagtgcga
     3301 tggcgcccag gaacacccag tcggggagcc ccagcgcccg caccaggaac cagacggtcg
     3361 ccagcaccac cacggaagcg agcgccagaa tcaccgc
//
LOCUS       DASWKS010000582        10645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3273006, whole genome shotgun sequence.
ACCESSION   DASWKS010000582 DASWKS010000000
VERSION     DASWKS010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10645
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3273006"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2688)
                     /locus_tag="VGA78_16555"
     CDS             complement(<1..2688)
                     /locus_tag="VGA78_16555"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX9895543.1"
                     /translation="MADERTAPEGLAMSSQAERGMDRRRFLTIAGVTGAGAAALSGCS
                     TGQVEKLIPYLVQSEDQVPGVATVYASTCTECSAGCGLHVITREGRAIKLEGNPEHPV
                     NRGRLCSRGQAGLQGLYNPGRISGPRARQGASFQDVTWDQALTQLSERVAGAQGRVAV
                     LSGAGGGSFTELLRQWTQALGGRLVRWEPFDHDAMRLANQRVFGLDELPAHDFARARL
                     IVSFGADFLESWLAPVENQRGFAESHGFNNGDMAKCVFIGPRRSLTGLNADEFHAVAP
                     GSEAALALAMANIILSERTSAPADANGLRGPLAEHTAERAAQVTGLTIEAITRLAREF
                     VSTRPSLAVAGGIGSQHRGAIELCAAVNLLNYIAGNVGDTVRFGAKLQSGDGYAGLQA
                     LQQAMDRGEIQVLIIHDANPVYALPRTARFAEALAKVPFKVSTGSIFDETSARCDLLI
                     PNHHALERWDDAAPREGVRSLMQPVMEPVFQTRPTGDVLLQVARTVGGPLAGLTAPSF
                     EAYLKAVWEGLAPTTGATDPEGSWREALRTGGSFAQPPATTVRLAGGAAASAELPRFD
                     GEGEFTLIAYPHSMYYDGRGANRPWLLENPDPVTKITWHSWIEIHPETAREMDLRAGE
                     HLRLTSPHGSIEAPVYLYAGVRRDVLAVPLGLGHTEFGQFATGQGVTPLDLLSAEGGN
                     GFLPYCSTRVSAAKVGAFTKLARTDGNPRQLGRGIVETMPVALARRGLTVRQAYEAEG
                     HAEHEINPERELEAIGGWSQAQVEKQKFGDYAQAHPKWGMSVDLSRCTGCSACVTACY
                     AENNIPWVGEDEVRLGREMSWMRIERYWEGGEGDEPLESRFIPMPCQHCDNAPCEPVC
                     PVYAAYHTPDGLNGQVYNRCVGTRYCANAPCEPVCPVYAA"
     gene            complement(2701..3309)
                     /locus_tag="VGA78_16560"
     CDS             complement(2701..3309)
                     /locus_tag="VGA78_16560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX9895544.1"
                     /translation="MRQLAVLGTFAVLVLGGGLVLASRSSGAQQTTPAAPDSVTAPVL
                     SARDSAALKGPRQPVFFRHDIHAGQFKIDCQYCHYSVTVSSEPGIPSLQTCMGCHLVV
                     GGSDSASRIEIRKVRQFWNDRDKPDAPQLEWVRIHNLARHAHFPHMRHVKAMGSKACG
                     TCHGDVARMPQVWEVNNINNMGFCISCHLQRNVSRDCSVCHY"
     gene            complement(3506..4240)
                     /locus_tag="VGA78_16565"
     CDS             complement(3506..4240)
                     /locus_tag="VGA78_16565"
                     /inference="COORDINATES: protein motif:HMM:TIGR00050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX9895545.1"
                     /translation="MSPPPVLVLVEPQDLVNIAAAVRVAKNFGLTDVRLVNPREYDAW
                     RVEGIAHNTADLLARLRIVATLDEALADCVYAVALTARERRAKRSLLRPRAAAAQLVE
                     RSGDGPVAMVAGREDKGLTNEELDRCDALVTIPTNPEHRSLNLAQAICILCYETLVVR
                     TGLESPTKPPRRRADAATHEQQELLFTDWQRTLVQIDFFKTRQPEFVMRSLREIFFRA
                     DLDGREATLLRAMALEVVRYLERTKV"
     gene            complement(4237..5697)
                     /locus_tag="VGA78_16570"
     CDS             complement(4237..5697)
                     /locus_tag="VGA78_16570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEX9895546.1"
                     /translation="MARLDRFLQALLAHGGDSLLLVAGQPVRLMHRGVARPVSKEIID
                     EAQVAALIRELAPPAIAPLLGPQARLSFTYQAPMGLVEVDLAPENGASGATLKFRRPA
                     GASAASAPAEPLVASEPDLGPARDEMERLLRMLAETGASDLHLRIGEPPIMRRDGDLM
                     RTDAAPVTSEQLERMLLSIMTPVAKAEFRDAGDADWAWEIEGVARYRCNAGRDRNGPI
                     AVFRLIPAAIRSAVDLGLTAPVQQLANLSKGLVLVTGPTGSGKSTTLAALIDLVNSSR
                     TDHIITIEDPIEFVHQGKRCLITQRQVGLHTKSFASALRAALREDPDVVLVGELRDLE
                     TISIALETAETGHLVFGTLHTTTAPSTLDRIIDQFPPEQQSQVRVMLSESLRGVVAQV
                     LCKKTGGGRVAAIEVLLSIPAVSNLIREGKTFQIPSIMQTNRKIGMVTLNDSLLELVE
                     SNQVEPREAWLKAADKTGLLASLKARGHKTDFMTEA"
     gene            complement(5712..6185)
                     /locus_tag="VGA78_16575"
     CDS             complement(5712..6185)
                     /locus_tag="VGA78_16575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895547.1"
                     /translation="MSEFGTTTRVRSVVTLANGEVYPGYIHLVDWAHHRAGPETPVEM
                     LNRQQGFFPLTQDDGAAIFIPKPQVAMVTCEWPPEGWPPEGVELLPEAGRRLAIEVRL
                     ANGEEFRGQVSVSLPPDRARALDYLNASEHFFQLVTEGAPRIFNRAHVTVVRPLD"
     gene            complement(6182..7069)
                     /locus_tag="VGA78_16580"
     CDS             complement(6182..7069)
                     /locus_tag="VGA78_16580"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9895548.1"
                     /translation="MRAAFLGLGAIGRPIAAHLVQQFDLAVWNRTASRAGDFARETGA
                     TAARTAREAAYGSDLVFTCLPNSPELESVLEGPDGLEAGLAPGALLVDLTSGIPAVSR
                     RIAARLARKGIHFLDAPVSGGTAGAEAGTLTIMVGGEAAAFERARPALETFGKRIVHV
                     GPAGAGHALKAVHNMLIAVNVFALGEGLTTLAKAGVAPRTALDVINHANGRSFVSERL
                     VPERVLSGAWPRTFRLALLDKDVDIARALAAEEGIEAPMIDTVSRLLHQAHAALGEEA
                     DHVEVIRLHERQAGVELRG"
     gene            complement(7073..7570)
                     /locus_tag="VGA78_16585"
     CDS             complement(7073..7570)
                     /locus_tag="VGA78_16585"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HEX9895549.1"
                     /translation="MPFSGTLEKSLNDQISKEFYASYFYLAMAAWFAERNLDGFASWM
                     RVQADEERGHAMRIYQYVLDRGGRVVLGPIEEPPITWKSPLEVFETARKHEQLVSGSI
                     NDLYTQALTERDYPSQVMLQWFISEQVEEEKASTAIVERLRLVGDNASGLLILDGQLG
                     QRTKV"
     gene            7636..8424
                     /locus_tag="VGA78_16590"
     CDS             7636..8424
                     /locus_tag="VGA78_16590"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895550.1"
                     /translation="MRIPMSPARAGGALLGALLVLFIVGPVLRLLWEASPAALAGAAA
                     DVEVRDAIALTVLCASASTLIALLLGLPLGYALARTRFPGSRVLRGILDLPIVIPHPV
                     AGIALLLFLGRHSPLGTALGQLGIEVVSHVPGIVAAMLFVSAPLVVSGAREAFAGVDP
                     KLERVARTLGDSGWLAFRRITLPLAGRGILAGALLAWGRSVSEFGAIVILAYHPKVAS
                     ILIYDRFTLYGLPAAVPAAALLLLVALLVFILLRFLEPRAGERR"
     gene            8421..9485
                     /locus_tag="VGA78_16595"
     CDS             8421..9485
                     /locus_tag="VGA78_16595"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895551.1"
                     /translation="MIRLHDLSLALGSFRLESVSLEVPAGGYGLVIGPTGSGKTSLLE
                     AVAGHVPVARGRIELGGRDVTREPPEQRGLGFVYQSYHLFPHQSVRENIGYGLRNRGE
                     AAGGRRVEELAQLLGITALLDRSIRGLSGGEQQRVALARALAPRPRILLLDEPFAAVD
                     PALRRVLRRELQQIREQEGITTLHVTHDVDDALRLGDMVAVLAEGRVAQTGPPETVFR
                     YPNSPFVAHFLGSGTILKGTITACGPADGVPPRFPARFESGSLVLEVVAEREGEAHAV
                     IRPEDLLLSHSPFPDYPRNRFEGVVRRVERLGPVAHVQVEVAGLALLAAVTSATAESL
                     GLRPGLAIMVGLKATAVHLL"
     gene            complement(9542..>10645)
                     /locus_tag="VGA78_16600"
     CDS             complement(9542..>10645)
                     /locus_tag="VGA78_16600"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF023227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX9895552.1"
                     /translation="SYEVREFGVRSGMPISQAERLCPRATFAPVPRRECGIKSREVRA
                     VLDEWAPLVEPASIDEFYLGMDGTEALYRHEPLAETASRIRDDLLRRTGLAVSFGGGS
                     NRLIAKLAVEYAKPKPGTGRTGVHVVPAGEEAAFVATLELVAIPGIGPRFGENLRRKG
                     LIKVTDALGLDRATLVLWFGRRTGDWLYDRIRGVSHSPVQGRVEAKSVSRENTFATDL
                     ATDDELAHELVRLTARVCQDLRGDALVARTVTVKLRDHDFRTRQAGRTLEGHVSTERV
                     IVPLALELLGRLRSERRCPARLIGIGLSQLAAADRPQQLGLFGTPVGRETERDRKLAR
                     TVDTITSRFGQGAIAPARAVEAGRSQSKAVEDG"
BASE COUNT         1599 a         3685 c         3589 g         1772 t
ORIGIN      
        1 cgccgcgtat accggacaga ccggctcgca cggcgcgttg gcgcagtacc gggtacccac
       61 gcaacggttg tagacctggc cgttcagccc gtcgggcgta tggtaggccg cgtagaccgg
      121 gcagaccggc tcgcagggcg cgttgtcgca gtgctggcag ggcatcggga tgaagcgcga
      181 ttcgagcggt tcgtcgcctt ctcccccctc ccagtaacgc tcgatccgca tccaggacat
      241 ctcccggccc agccgcactt cgtcttcccc cacccaggga atgttgttct cggcgtagca
      301 ggcggtcacg caggcggagc agccggtgca gcgcgacaga tcgacgctca tcccccattt
      361 ggggtgcgcc tgggcgtagt caccgaattt ctgtttctcg acctgggcct ggctccaccc
      421 gccgatcgcc tcgagctccc gttcggggtt gatctcgtgc tcggcgtggc cctcggcctc
      481 gtaggcctgc ctaaccgtca gaccccgccg ggccaacgcc accggcatgg tctcgacgat
      541 cccccgcccc agctgccgag ggttgccgtc ggttcgggcc agtttggtaa aggcccccac
      601 tttggcagcg ctgaccctgg tggagcaata gggcaggaat ccgttgccgc cttccgccga
      661 caagagatcc aggggcgtta ctccttgccc ggtggcaaac tggccgaact cggtgtgacc
      721 caggcccagc ggcacggcga ggacatcccg gcgcaccccg gcatagaggt acactggggc
      781 ttcgatcgac ccgtggggcg aggtgagccg caggtgctcg ccggcgcgga ggtccatttc
      841 tcgcgcggtc tcggggtgga tctcgatcca ggaatgccag gtgatcttgg tgacggggtc
      901 cggattctcg agcaaccagg gccggttggc gccacgcccg tcgtagtaca tgctgtgcgg
      961 gtaggcgatc agggtgaact cgccctcacc atcgaaccgc ggcagttccg ccgacgcggc
     1021 ggcgccgccg gccagccgca cggtggtggc gggcggttgg gcaaagctgc cgccggtccg
     1081 gagcgcttcg cgccaggagc cctccgggtc ggtcgcgccg gtggtcggtg ccaggccctc
     1141 ccagaccgct ttcagatagg cttcgaagct tggcgcggtg agccccgcca gcggaccccc
     1201 gaccgtccgc gccacctgaa gcagcacgtc gccggtggga cgggtctgga agactggctc
     1261 catcaccggc tgcatcaggg agcgaacccc ctcgcgaggc gccgcgtcgt cccagcgctc
     1321 gagcgcgtga tggttgggga tcagcagatc gcaccgggcc gacgtctcgt cgaagatcga
     1381 cccggtcgag accttgaacg ggaccttggc cagcgcttcg gcgaagcgcg ccgtccgggg
     1441 gagcgcgtac accgggttgg cgtcgtggat aatgaggacc tggatctcgc cccggtccat
     1501 cgcctgttgc agcgcctgca ggccggcgta gccgtcgccg ctctgcagct tcgctccgaa
     1561 gcgcaccgtg tcgcccacgt tgccggcgat atagttgagc agattgactg cggcgcagag
     1621 ctcgatcgcg ccgcggtgct gcgagccgat cccgccggcc accgccaggc tggggcgggt
     1681 ggatacgaat tcgcgggcca ggcgggtgat ggcctcgatg gtaaggccgg taacctgggc
     1741 cgcccgctcc gcggtgtgct cggccagcgg gccccggagc ccgttggcat cggccggtgc
     1801 gctggtccgt tccgacagga tgatgttggc catcgcgagc gccagggcgg cctcgctccc
     1861 cggcgcgacc gcatgaaact cgtcggcgtt gagtccggtg agcgagcggc gcggaccgat
     1921 gaagacgcac ttggccatgt cgccgttgtt gaacccgtgg ctctcggcga agccgcgctg
     1981 attctcgacc ggcgccagcc agctctccag aaaatcggcc ccgaacgaca cgataaggcg
     2041 ggcccgtgcg aaatcatggg ccggcagctc gtccaggccg aagacccgct ggttggccag
     2101 tcgcatggca tcgtggtcga agggctccca ccgcaccagc cgtccgccca acgcctgggt
     2161 ccactgccgc aacagctcgg tgaagctgcc gccgccggcg ccgctcagta cggcgacccg
     2221 gccctgggct cccgccactc gctcggagag ctgggtgagg gcctgatccc aggtcacgtc
     2281 ctggaagctc gccccctgcc gcgcccgagg cccggagatc cgacccgggt tgtagaggcc
     2341 ctgcagcccg gcctgacccc gcgagcataa ccggccccgg ttgaccggat gttcggggtt
     2401 gccttccagc ttgatggccc ggccttcccg ggtgatcacg tggaggccgc atccggccga
     2461 gcattcagtg caggtgctgg cgtagaccgt cgcgaccccg gggacctggt cttcggactg
     2521 caccaggtaa gggatcagct tttcgacctg gccggtggag cagccggaca atgctgcggc
     2581 cccggcgccg gtgacgccgg cgatcgtgag gaagcggcgg cgatccatgc cgcgttccgc
     2641 ctgcgatgac atcgcgagtc cttccggagc ggtgcgctcg tcggccatcg agggtgctcc
     2701 tcagtaatgg cagacggaac agtcgcgcga cacgttccgc tggaggtggc agctgatgca
     2761 gaagcccatg ttgttgatgt tgttgacttc ccagacctgg ggcatacggg ccacgtcccc
     2821 gtgacaggtg ccgcaggctt tcgatcccat cgccttgacg tgccgcatgt gggggaagtg
     2881 ggcgtggcgg gcgagattgt ggatccggac ccactcgagc tggggggcgt cgggcttgtc
     2941 acggtcgttc cagaattgcc gcaccttgcg gatctcgatc cgcgacgcac tgtcggatcc
     3001 cccgaccacc aggtgacacc ccatgcacgt ctgcagcgac ggaatgcccg gctcgctgga
     3061 cacggtcacc gagtagtggc agtactggca gtcgatcttg aattgcccgg cgtggatatc
     3121 gtggcggaag aacaccggct ggcgcggacc cttgagcgcc gcactatccc tcgcggatag
     3181 caccggcgcc gtcaccgaat caggcgcggc cggcgtggtc tgctgggctc cgctggatcg
     3241 gctggccagc acgagcccgc caccaagaac cagcactgcg aaggtaccga gcaccgcgag
     3301 ctgtcgcatg cctgaccctg ccgtggcctc tgattgagcg gtgtggaggt tttcctaccg
     3361 gagaatcccg gtaagagccg cgtaaaaata gagtgacaac caacttatca aaagggggga
     3421 ggagacagga ctaaggactt aggaccaagg tctaagtgat tcccggaatg cccgcatgca
     3481 aatgcggtta ctgagtccgt agaccttaga ccttagtcct ctccagatat cgcaccacct
     3541 ccaacgccat cgctctcagc agcgtcgctt ctctcccatc cagatccgcc cggaagaaga
     3601 tctcccgcag cgatcgcatg acgaactcgg gctgccgggt cttgaagaag tcgatctgca
     3661 ccagggtccg ctgccaatcg gtgaacagca gctcctgttg ctcatgggtc gctgcgtcgg
     3721 cccggcggcg ggggggcttg gtcggcgatt cgagaccggt ccggaccacc agcgtctcgt
     3781 agcacaggat acagatcgcc tgcgccagat tgagcgagcg gtgctcggga ttggtcggga
     3841 tggtgaccag ggcatcacac cggtccaact cctcgttggt cagccccttg tcctcccgcc
     3901 cggcgaccat ggccactgga ccgtcgccac tgcgctcgac cagctgggcg gcggcggccc
     3961 tgggccggag cagggaccgc ttggcccgcc gttcccgcgc cgtgagcgcg accgcataga
     4021 cgcagtccgc cagggcttcg tccagcgtgg cgacgatccg cagccgggcc agcaaatcgg
     4081 cggtgttgtg ggcgatgccc tcgacccgcc aggcgtcgta ttcccgggga ttgaccagcc
     4141 ggacgtcggt gagcccgaag ttcttggcga cccggaccgc ggccgcgatg ttgaccaggt
     4201 cctgaggctc gaccaggacc agtaccggcg gagggctcac gcctcggtca tgaagtcggt
     4261 tttgtggccc cgggctttga gcgaggccag caggccggtc ttgtccgccg ccttgagcca
     4321 cgcctcgcgc ggttcgacct gattcgattc caccagctcg agcagcgagt cgttgagggt
     4381 gaccatgccg atctttcggt tggtctgcat gatggacgga atctggaagg tctttccttc
     4441 ccggatcagg ttggagacgg ccgggatcga gagcagcacc tctatggcgg cgacccgacc
     4501 gccaccggtc ttcttgcaca agacctgagc caccacgcct cgcagcgatt ccgagagcat
     4561 cacccggacc tgcgactgct gttccggcgg gaactgatcg atgatccggt ccagcgtgct
     4621 gggcgccgtg gtggtgtgaa gcgtgccgaa caccaggtga ccggtctcgg cggtctcgag
     4681 cgcgatggaa atggtttcca ggtcgcgcag ctcgcccacc aggacgacgt cggggtcttc
     4741 ccggagcgcg gcccgcagcg cgctggcgaa actcttggtg tggagcccga cctggcgctg
     4801 ggtgatgaga cagcgcttgc cctggtgcac gaattcgatg ggatcttcga tggtgatgat
     4861 gtgatcggtg cggctgctgt tcaccagatc gatcagggcg gcaagcgtag tggacttgcc
     4921 gctcccggtg ggcccggtga ccagtaccag tcccttgctg aggttcgcca gctgctggac
     4981 cggcgcggtc agtcccaggt ctaccgccga gcggatggcg gcgggaatca gccggaagac
     5041 tgcgatcggc ccgttgcggt cccggccggc gttacagcgg tagcgggcca ccccttcgat
     5101 ctcccaggcc caatcggcgt cgcccgcatc ccggaattcg gccttggcga ccggcgtcat
     5161 gatcgagagc agcatccgtt ccaactgctc cgaggtcacc ggcgctgcgt cggtgcgcat
     5221 caggtcaccg tcacgccgca tgatgggcgg ctccccgatc cggaggtgga gatcggaggc
     5281 gccggtctcc gccagcatcc ggagcaggcg ctccatctcg tcccgcgcag gacccagatc
     5341 cggctccgag gcgaccagcg gctccgccgg cgccgacgcg gccgaggcac cggcgggccg
     5401 gcggaacttg agggtcgctc cgctggcgcc gttttccggg gccaggtcca cctcgaccag
     5461 tcccatcgga gcctggtagg tgaaggacag ccgggcctgg gggcctaaca gcggcgcaat
     5521 ggccgggggc gccagctcgc ggatcagcgc cgccacctgg gcctcgtcga tgatctcctt
     5581 gctgaccggg cgggccaccc cccgatgcat cagccggacc ggctggccgg ccaccagcag
     5641 aaggctgtcg ccgccgtggg cgagcagggc ctgcagaaag cggtcgagtc gtgccacgtg
     5701 ttccctcggc gtcaatcgag cggccgcacc acggtgacgt gggcgcggtt gaagatccgg
     5761 ggcgcgcctt cggtgaccag ctgaaagaaa tgctccgacg cgttgagata atccagcgcg
     5821 cgggcccggt cgggtgggag tgacacgctc acctgaccgc ggaactcctc gccgttcgcc
     5881 aggcggactt cgatcgccag ccggcgcccg gcctcgggca gcagctccac cccctccggg
     5941 ggccatcctt ccggcggcca ttcgcaggtc accatcgcca cctggggttt gggaatgaag
     6001 atggccgccc cgtcgtcctg agtcagtgga aagaatccct gctgccggtt gagcatctcc
     6061 accggcgttt ccggtccggc ccggtgatgg gcccagtcca ccagatggat gtacccggga
     6121 tagacctcgc cgttggcgag ggtcacgacc gagcgtaccc gggtcgtcgt accgaattcg
     6181 ctcatcctcg aagctccacc ccggcttggc gctcgtgcag ccggatcacc tcgacgtggt
     6241 cggcttcttc acccagcgcc gcatgcgcct ggtgcaacag ccggctgacc gtatcgatca
     6301 tcggcgcctc gatcccttcc tcggccgcga gggcccgggc gatgtccaca tccttgtcca
     6361 gcaatgccag ccggaaggtc cggggccagg cgccgctgag cacccgctcc ggcaccagcc
     6421 gttcgctgac gaaggagcgg ccgttggcgt ggttgatcac gtccagcgcg gtgcgcggcg
     6481 ccacccccgc cttggccagc gtggtgagcc cttcgcccag cgcgaacacg ttgacggcga
     6541 tgagcatgtt gtgcactgct ttcagcgcgt gtcccgcgcc ggccggtccc acgtggacga
     6601 tccgcttgcc gaaggtctcc agggcgggac gggcccgctc gaacgccgcg gcctcacccc
     6661 ccaccatgat ggtcagcgtt ccggcctccg caccggcggt gccgccgctc accggggcat
     6721 ccagaaaatg aatgcccttc cgagccagcc gggcggcgat ccggcgcgag accgccggga
     6781 ttcccgaggt gagatccacc agcagcgccc cgggcgcgag ccccgcctcc aggccgtcgg
     6841 gaccctccag cactgattcc agctccggtg agttgggcag acaggtgaag accaggtcgg
     6901 atccgtaggc cgcctcccgg gcagtcctgg ccgcggtggc cccggtctcc cgcgcgaaat
     6961 cgccggcccg gctcgcggtc cggttccaca ccgccagatc gaactgctgg accaggtggg
     7021 cggcgatggg ccgcccaatc gctcccaggc cgagaaaggc ggcgcgcaag ggctacacct
     7081 tggtgcgttg gcccaactgg ccgtcgagaa tcagaagccc ggaggcgttg tcacccacca
     7141 gccgcagccg ttccacgatc gcggtgctgg ccttctcctc ttcgacctgc tcgctgatga
     7201 accactgcag catgacctgc gaaggatagt cccgctccgt gagggcctgg gtgtacaggt
     7261 cgttgatgct gcccgacacc agctgctcgt gcttccgggc agtctcgaac acctcgagcg
     7321 ggctcttcca cgtgatgggc ggctcctcga tgggccccag cacgacacgg ccgccgcggt
     7381 cgagcacgta ctggtagatc cgcatggcgt ggccccgttc ttcatcggcc tgcacccgca
     7441 tccagctggc gaagccatcc aggttgcgtt ccgcgaacca ggcggccatg gccaggtaga
     7501 agtaggaggc gtagaactcc ttgctgatct gatcattcag acttttttcc agcgtgccac
     7561 tgaacggcat gaggcggctc ccgatctcta gtggccagcg accagcgact cgcgactaca
     7621 agatacattt gatcggtgcg catccccatg tctccggccc gcgccggtgg cgccctgctc
     7681 ggcgcgctgc tggtgctctt catcgtcgga ccggtgctgc ggctcctctg ggaggcttcc
     7741 cccgcggcgc tggccggggc cgccgccgat gtcgaggtgc gggatgccat tgccctgacc
     7801 gtcctgtgtg cctccgcctc caccctcatc gcgctgctgc tcggcctgcc gctgggttac
     7861 gccctggcgc gcacccgttt tccgggcagc cgggtcctgc gagggatcct cgatctgccc
     7921 atcgtcattc cccacccggt ggccgggatc gcgctgctcc tctttctggg acgccactcg
     7981 cccctgggaa cggcgctggg acagctgggt atcgaggtgg tgagtcacgt ccccggcatc
     8041 gtggccgcca tgctgttcgt ctccgcgccg ctggtggtga gcggggcgcg ggaagccttc
     8101 gccggggtcg atcccaagct cgagcgggtg gcccgcaccc tgggtgattc aggctggctc
     8161 gccttccggc gcatcaccct gcccctcgcc gggcggggca tcctggccgg cgcgctcctc
     8221 gcgtggggcc ggagcgtcag cgagttcggg gccatcgtca tcctcgccta ccaccccaag
     8281 gtggcgagca tcctgatcta cgaccggttt accctgtacg gcctcccggc ggcggtaccg
     8341 gccgcggcgc tgctgctgct ggtggccctc ctggtgttca tcctgctgcg cttcctcgag
     8401 ccccgcgccg gcgagcgacg atgatccggc tgcacgacct gtcgctcgcg ttgggcagct
     8461 tccggctcga gagcgtgtcg ctcgaggtac ccgccggcgg ttacggtctg gtgatcggac
     8521 ccaccggctc gggaaagacc agtctgttgg aggccgtggc ggggcacgtc ccggtggcgc
     8581 gcggccggat cgagctgggc gggcgcgacg tgacccggga gccgcccgaa caacggggcc
     8641 tcggcttcgt gtatcagtcc taccacctct ttccccacca gtcggtgagg gagaacatcg
     8701 ggtacggtct gcgcaaccgc ggggaggcgg cgggcggacg ccgagtcgag gagctggccc
     8761 agctgttagg catcaccgcc ctgctggacc gatccatccg gggcttgagc ggcggggagc
     8821 agcagcgggt cgctctggcg cgcgcgctgg cgccccggcc ccggattctg ctgctggatg
     8881 agccgttcgc cgcggtcgat ccggcgctgc ggcgggtcct gcggcgggaa ctgcagcaaa
     8941 tccgggaaca ggaaggcatc accacgctgc acgttacgca cgatgtggac gatgcgctgc
     9001 ggctgggcga catggtcgcg gtcctcgccg agggccgagt cgcgcagacc ggtccgcccg
     9061 agaccgtgtt tcgctacccc aactcacctt tcgtggcaca cttcctcggt tccgggacga
     9121 tcctcaaggg caccatcacg gcctgcggcc ccgccgacgg cgttccgcct cggttcccgg
     9181 cccgcttcga gagcggctct ctggtgctgg aggtggtggc agagcgggaa ggcgaggccc
     9241 atgcggtgat ccgccccgaa gacctgctcc tcagtcacag cccgtttcct gactacccca
     9301 gaaaccgttt cgaaggggtg gtccgtcgag tcgaacgcct gggacccgtc gcccatgtgc
     9361 aggtggaggt cgccgggctg gccctgctgg cggccgtgac ctcagccacc gcggagagcc
     9421 tgggactgcg acccgggctc gcgatcatgg tgggtctcaa ggcgaccgcc gtgcacctgc
     9481 tttagtcgaa ggcggtcgaa ggcggtcgaa gattgtcgaa gacggtcgaa gatggtcgaa
     9541 cctaaccgtc ttcgacagcc ttcgactgac ttcgaccggc ttcgacagcg cgtgccgggg
     9601 cgatggcgcc ctgcccgaac cgcgaagtaa tcgtgtcgac cgtcctggcc agcttccgat
     9661 cccgttccgt ctcccgcccg accggcgtgc cgaacaggcc cagttgttga gggcggtccg
     9721 cggccgccag ctgactcagt ccgatcccga tcaggcgggc cgggcagcgc cgttcggacc
     9781 gcaaccgccc cagcagctcc agcgccagcg gcacgatcac ccgctcggtc gagacatgac
     9841 cctccagggt gcggcccgct tgccgagtgc ggaaatcatg gtcgcggagc ttcaccgtca
     9901 ccgtgcgcgc gaccagagca tctccccgca ggtcctgaca gacccgggcg gtgagccgca
     9961 ccagctcgtg cgccaactca tcgtcggtgg cgagatcggt tgcgaaggta ttctcccggc
    10021 tcaccgactt ggcctcgacc cggccctgca ccggtgagtg gctcaccccc cggatacgat
    10081 cgtagagcca gtccccggtg cggcggccga accagagcac cagcgtggct cgatcgagcc
    10141 ccagtgcgtc ggtcaccttg atcaggccct tgcggcgcag attctcgccg aagcggggac
    10201 cgatgccggg aatggctacc agctccagcg tcgccacgaa ggcagcctct tcacccgccg
    10261 gtaccacgtg cacaccggtg cggccggtgc ccggcttagg cttggcgtat tcgaccgcca
    10321 gcttggcgat caagcggttg ctgcctccgc cgaacgaaac ggccaggccg gtacggcgca
    10381 gcaggtcgtc tcgaatccgc gaggccgtct ccgccagcgg ctcgtgtcgg tagagcgctt
    10441 ccgtgccgtc catgccgagg tagaactcgt cgatgctggc cggttccacc agcggggccc
    10501 attcatccag gaccgcgcga acttcccggc tcttgatccc gcactcccgc cgcggcaccg
    10561 gcgcaaatgt ggccctggga cacagccgct ccgcctggga gattggcatt cccgaccgca
    10621 ccccgaactc ccgcacctcg tacga
//
LOCUS       DASWKS010000583         3648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2909372, whole genome shotgun sequence.
ACCESSION   DASWKS010000583 DASWKS010000000
VERSION     DASWKS010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2909372"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VGA78_16605"
     CDS             complement(<1..186)
                     /locus_tag="VGA78_16605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9895553.1"
                     /translation="MRAVRLVARGFRNLADLDLDLPPAGAAFLGPNGHGKTSVLEAIY
                     YPVLFRSIRHATDAEVCR"
     gene            complement(302..1081)
                     /locus_tag="VGA78_16610"
     CDS             complement(302..1081)
                     /locus_tag="VGA78_16610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX9895554.1"
                     /translation="MYTTLLFEIRDGIAFVTVNRPDKLNALNDDVITELGQMARQVAD
                     DGAIGAVILTGSGAKAFVAGADITQLAQTDVERARDLSRKGSSIFRQLERLTKPIIAA
                     VNGFALGGGCELAMACHVRLASENARFGQPEVKLGTCPGYGGTVRLARLVGRGRAIEL
                     LATGAMIDAAEAYRIGLVNRVVAAEQLLAEAEKLARAMMEQGPLAVAACLALVDDQEN
                     HSLESALERESEVFADLAATADFREGTAAFIEKRKPVFRGG"
     gene            1228..2712
                     /gene="glpK"
                     /locus_tag="VGA78_16615"
     CDS             1228..2712
                     /gene="glpK"
                     /locus_tag="VGA78_16615"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEX9895555.1"
                     /translation="MPSILALDQGTTGSTALVIHQDGTILGRGYREIPQYYPEPGWVE
                     HDPEDLFLNTLAAARDAIHAAREMPTGMGITNQRETVVVWERKTLRPVHRAIVWQDRR
                     TTGRCEELKTQGREPWIRERTGLLLDPYFSATKLEWLLRDPGLARRAERGELAAGTVD
                     SWLIARLTGGAVHVTDHTNASRTLLYDLETRSWNPELLGLFSVPETVLPRVARSSEVV
                     GEAANEHLGAVLPIAGIAGDQQAALFGQGCVQAGAAKNTYGTGAFLLVHAGEARPEAG
                     PGLLTTVACGPKGEPAYAIEGSVFIAGAAVQWLRDGLGLIASASETEALARSVPDTGG
                     VHFVPAFVGLGSPHWEPNARGTITGITRGTTRAHLVRAALEAMAFGSRDLLDAMVQRS
                     DLQVPCLRVDGGAAANDWLMQFQADILGLPVERPPVVETTALGAAKLAAMALGVWGGG
                     EEPPGLAAREVFTPHGDAAWRQSQLLGWRRAVEAALSWARVKGS"
     gene            2826..3584
                     /locus_tag="VGA78_16620"
     CDS             2826..3584
                     /locus_tag="VGA78_16620"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX9895556.1"
                     /translation="MSGLCPSCGARASGKFCGHCGAAMTARPCGKCGVSVAAGARFCA
                     ACGTTVGAAGTSASQQPPAGGRPVLPFAIAGVAVLVFVLVLALRGKPAGAPPQAIQSA
                     PSSGSLPDLSQMSPREAFNRLFTRVMTASEQGDTAQANRFMPMALMAYRNLPEVDIDA
                     RYDVALIHLHAGDIAAARALADTIQAERSKHLFGFVLRAAIARFDGKPDAAKAAYRQY
                     LAVADEELRANRPEYDAHRSMLDSFRQTAITGSR"
BASE COUNT          566 a         1243 c         1222 g          617 t
ORIGIN      
        1 gcgacacacc tcggcgtcgg tcgcgtggcg gatggaccgg aacagaaccg ggtagtaaat
       61 ggcttcgaga acgctcgtct tgccgtgtcc gttagggccc aggaaggccg ctccggcagg
      121 tggcagatcg aggtcgagat cggccagatt tcggaagccc ctcgcgacca gtcggacggc
      181 ccgcatcgca tgaaatctag cggacttagg gttgtttttg cagtcggtca gtcggtcagt
      241 cggtcggtcg gtccggtcta tcccgccccc cccgcccacc cgaccgactg accgactgac
      301 ttcatcctcc ccgaaagacc ggcttccgct tctctataaa cgccgcggtc ccctctcgga
      361 aatcggccgt cgcggccagg tctgcaaaca cctcggactc tcgttccagg gcggattcca
      421 gggagtgatt ctcctgatcg tccaccaggg ccagacaggc ggccacagcc aggggaccct
      481 gttccatcat cgcccgcgcc agcttctcgg cttcagccag cagctgctcg gcggcgacca
      541 cccgattgac cagcccgatc cggtacgcct ccgccgcgtc gatcatcgcg ccggtggcga
      601 gcagttcgat ggcgcggccc cgccctacca gccgagccag cctaacggtg cctccgtacc
      661 cggggcaggt cccgagcttc acctccggct ggccgaagcg ggcgttctcg ctcgccaggc
      721 gaacgtggca ggccatggcc agctcgcagc caccacccag agcgaagccg ttgaccgcag
      781 cgatgatcgg cttggtgagt cgctccagct gccggaaaat cgaggagccc ttgcgggaca
      841 ggtcccgggc ccgctccacg tcggtctggg ccagctgggt gatatccgcc ccggccacaa
      901 acgccttggc gccggagccg gtcagaatca ccgccccgat ggccccgtca tccgctacct
      961 gccgggccat ctgtcccagc tcggtaatga cgtcatcgtt gagcgcgttg agcttgtcgg
     1021 gccggttgac ggtcacgaac gcaatgccgt cacggatctc gaagagcagg gtggtgtaca
     1081 taggctcgag ggctggactg agtcaaacta ctgagtactg agtactgagt tctgagggag
     1141 ccgcagctgg gctctcgtcg ttgaccgcgc gctactatag tctaatctcg tgcagttcct
     1201 gttactcagt actcatcact ggattcgatg ccatccatcc tcgcgttgga ccagggcacc
     1261 accggctcca ctgcactcgt catccaccag gacgggacca ttctggggcg cgggtaccgc
     1321 gagattcccc agtactaccc cgaaccgggc tgggtggagc acgacccgga agatctgttc
     1381 ctgaacaccc tggcggcggc ccgcgacgcg atccacgcgg cccgcgagat gccgaccggc
     1441 atgggtatca ccaaccagcg cgaaaccgtg gtggtgtggg aacggaagac cctgcgcccg
     1501 gtgcaccggg ccatcgtgtg gcaggaccgg cggaccaccg ggcggtgcga agagctcaag
     1561 acccagggcc gtgagccctg gatccgggag cgcacgggtc tcctgctcga tccttatttc
     1621 agcgcgacca agctggagtg gctgctgcgg gatcccgggc tcgcgcggcg cgcggagcgc
     1681 ggcgagctcg cggccgggac agtcgacagc tggctcatcg cgcgcctcac cgggggcgcg
     1741 gtccacgtca ccgaccacac caacgcgtcg cgcactctgc tctacgatct cgagacccgg
     1801 tcctggaacc ccgaacttct gggcctgttc tcggtacccg agaccgtcct cccccgggtc
     1861 gcccgctcga gcgaggtggt cggcgaagcc gccaacgagc atctgggtgc cgtactgccg
     1921 atcgccggca ttgcaggcga ccagcaggcg gcgctgttcg gccagggttg cgtccaagcc
     1981 ggtgcggcga agaacaccta cggcaccggc gcgtttcttc tggtccacgc cggagaagcc
     2041 cggcccgagg ccggaccggg tctgctgacg accgtggcct gtgggccgaa gggcgagccc
     2101 gcctacgcca ttgaggggag cgtgttcatc gccggtgcgg cggtgcagtg gctgcgggat
     2161 gggctgggcc tcatcgccag cgcctccgaa accgaggcac tcgcgcggag cgtacccgat
     2221 acgggtgggg tgcacttcgt tcccgcgttc gtcggcctcg gttcgcccca ctgggagcct
     2281 aacgcccgcg ggaccattac cgggattacc cggggaacca cccgggccca tctggtgcgg
     2341 gccgccctgg aagcgatggc gttcggttcg cgggacctgc tcgacgccat ggtccagcgg
     2401 agcgacctcc aggttccctg tctccgggtc gacggcggcg cagccgcaaa cgactggctg
     2461 atgcagttcc aggcggacat cctcgggctc ccggtcgaac ggccccccgt ggtcgaaacc
     2521 accgctctcg gcgccgccaa gctcgcggcg atggcgctgg gtgtttgggg cgggggcgag
     2581 gagccgccgg ggttggctgc ccgcgaggtc ttcacgccac acggggacgc ggcatggcga
     2641 cagtctcagt tgctgggatg gcgccgggcg gtcgaagccg cgctgtcctg ggcccgtgtg
     2701 aagggttcct gaaggctgca tgagaacata cccgacatcg ccgctcccgt cttgtccccc
     2761 ccggtggcta cggcgaaatt gaatcgatcc taaggatcgc tttcactctc actcgagtgg
     2821 cgtcgatgtc cggtctttgt ccgtcgtgcg gagcgagagc ctccgggaag ttctgcggtc
     2881 actgcggggc ggccatgacc gcccgcccct gcggcaagtg cggggtgagt gtcgcggccg
     2941 gggcccgatt ctgcgccgcc tgcggcacca ctgttggcgc tgccgggact tcggccagcc
     3001 agcagccgcc cgctggaggt cggccggtgc tgccgttcgc gatcgcgggt gtggctgtgc
     3061 tggttttcgt cctggtgctc gcgctccggg gcaagcctgc cggggctccg ccccaggcga
     3121 ttcagtccgc tccctccagc ggcagcctgc cggatttgag tcagatgtcc cctcgggagg
     3181 cattcaaccg gctctttacc cgggtcatga ccgcgtcgga gcagggtgat accgcccagg
     3241 ccaaccgctt catgcccatg gcgctgatgg cttatcgcaa cctgcctgag gtagatatag
     3301 acgcgcgtta cgacgtcgcg ctgatccacc ttcacgcggg cgacatcgcc gcggcgcggg
     3361 ccctggctga taccattcag gcggagcggt cgaaacacct gttcgggttc gtgctccggg
     3421 ccgcgatcgc ccggtttgac ggcaagccgg acgccgccaa ggcggcgtac cgtcagtatc
     3481 tggcggtggc ggacgaggag ctcagggcca accggccgga gtatgacgcc caccggtcga
     3541 tgctcgatag ctttaggcag accgcgatca ccgggtccag gtagtccagg cggggccaag
     3601 cgaggtcatc atgcaggcgc gcaacaagtt ccttctgggt tcggccat
//
LOCUS       DASWKS010000584         2167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3609910, whole genome shotgun sequence.
ACCESSION   DASWKS010000584 DASWKS010000000
VERSION     DASWKS010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3609910"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1446)
                     /locus_tag="VGA78_16625"
     CDS             complement(<1..1446)
                     /locus_tag="VGA78_16625"
                     /inference="COORDINATES: protein motif:HMM:NF040455.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEX9895557.1"
                     /translation="MKLLILLFPVTVVLSACRAENDAPPPSVSLDSAKTEPPSPEEGL
                     VISFPKAAAAIRSGIAGGRAVGLSRPALAAEREALRRLYDSETHAPLWVNVAGKPTQA
                     ARDAIAAMQTALEDGLDTLDYSATALDSAANVIDSTHAPDPAVVGRFDLALSTAFIRY
                     VGDLHSGRIDPRRIGFKLDLPVRRADIPAMVRTSLADGTIPQLVLTQRSPLVQYFRVK
                     EALARYRELADSLTDSVPAVTATVKPGESWTGVSPLSRRLRLLGDLADTVPGASAAAP
                     AANPEAGVPIEGANVPGRYGPPLVAAVKRFQERHGLTSDGVIGRATVAALNVPIRRRI
                     AQLELTLERLRWIPDLNGERFIVVNIPTFHLWAWDSLNAEGLPTLDMDVIVGQKALNT
                     QTPVFAENMRYVIFRPYWNVPPGILKSEVLPAIAEDPEYLQKNDMEIVQGQGDDAKPV
                     ALNPENLELLARGQLRVRQRPGPRNSLGLVKF"
     gene            complement(1522..>2167)
                     /locus_tag="VGA78_16630"
     CDS             complement(1522..>2167)
                     /locus_tag="VGA78_16630"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9895558.1"
                     /translation="ERELRGKVPDGVLESLSVRPGPVARVLSDVVNEQKAGLVVLGAK
                     RHGTVARWLGGSTAKNAVRALHCPVLISTGPKRPERILVSVDLSEMAKPTLESAQAWA
                     GLFGAALRVLHVVEPLLIGTEGMPLLDVGLFDAEAEQAFHQNIRPLVKHPGAESVVRR
                     GSALAQIEAEAESWKADLTVIGAHGRGRMERLFLGSVSEGVVNALPSSVLVVRS"
BASE COUNT          349 a          720 c          759 g          339 t
ORIGIN      
        1 gaacttcacc aggccgagcg agttgcgcgg cccgggccgc tggcggaccc ggagctgtcc
       61 ccgggccaac agctccaggt tctcgggatt gagcgcgacc ggtttggcgt cgtcgccctg
      121 accctgcacg atctccatgt cgttcttctg gaggtactcg gggtcctcag cgatcgcggg
      181 cagcacttcg ctcttgagga tgccgggcgg cacgttccag tagggccgga atatcacgta
      241 gcgcatgttc tccgcgaaga ccggcgtctg ggtgttgagg gccttctgtc ccacgatgac
      301 gtccatatcg agcgtgggga ggccctcggc gttgagcgaa tcccaggccc agaggtgaaa
      361 ggtcgggatg tttaccacga tgaagcgctc gccgttcaag tcgggaatcc agcgcagccg
      421 ctcgagcgtg agctccagct gggcgatccg ccgtcgaatc ggcacattga gcgccgccac
      481 cgtggctcgc ccgatcaccc cgtcggaggt caggccgtga cgctcctgga accgtttcac
      541 cgccgccacc agcggggggc catagcgacc aggcacgttg gcaccttcga tcggcacacc
      601 ggcttcggga ttggcagccg gggccgccgc agaggcaccc ggtaccgtat cggccaggtc
      661 gcccagcagc cgcagccggc gcgacaaggg gctcacaccg gtccaggact cacccggttt
      721 gaccgtggcg gtgacagcag gaaccgaatc agtgaggctg tcggccagct cgcgatagcg
      781 ggccagcgcc tccttcaccc ggaagtactg gaccagggga gatcgctggg tcaggaccag
      841 ctggggaatg gtgccgtcgg ccagactggt acgtaccatg gccgggatgt cggcgcggcg
      901 gaccgggaga tcgagcttga agccgatgcg ccggggatcg attcggccgc tgtgcaggtc
      961 gccgacatag cggatgaagg cggtgctcaa ggcgagatcg aagcggccca ccaccgccgg
     1021 atcgggagcg tgggtcgagt cgatcacgtt ggcggccgag tccagcgcgg tggcgctgta
     1081 gtccagggtg tcgagcccgt cttccagcgc ggtttgcatc gccgcgatcg cgtcgcgagc
     1141 cgcctgggtg ggcttgccgg cgacgttgac ccagagggga gcgtgggtct cggagtcgta
     1201 cagccgtctc agcgcctcgc gctcggcggc cagcgccggc cgggaaagcc ccacggcccg
     1261 gccgccggcg atgccgctgc ggatggccgc ggccgccttg gggaaggaga tgaccaggcc
     1321 ctcttcgggg gagggcggct cggttttggc cgaatcgagg gataccgatg gagggggtgc
     1381 gtcgttctcg gcgcggcaag ccgagaggac caccgtcacc gggaacagga gaatgagaag
     1441 tttcacgccg tacaaatgag gcgggaggcc agtcgcgctg caagtggcgg gcggggcggg
     1501 accacgcgca accggctccg actaactcct cacgacgagc accgaggacg gaagcgcgtt
     1561 caccacgccc tcgctcacac ttcccaggaa caatcgttcc atccggcctc ggccgtgggc
     1621 accgatcacg gtcaggtccg ctttccagct ctcggcttcg gcttcgatct gggccagagc
     1681 cgagccccgg cgaaccaccg actcggctcc ggggtgtttc accaggggcc ggatgttctg
     1741 gtggaaggcc tgctccgctt cggcatcgaa caggcctacg tccagcagag gcatcccttc
     1801 ggtgccgatc agcagcggct cgaccacgtg gaggactcgg agcgccgcgc cgaacagccc
     1861 ggcccacgcc tgggctgatt ccagcgtcgg ctttgccatc tcggagagat cgaccgagac
     1921 cagaatccgc tccggccgct tgggcccggt ggagatgagg acggggcagt gcagcgcccg
     1981 caccgcgttt ttggcggtgc tgccgcccag ccagcgcgcc acggtcccgt gccgcttggc
     2041 gccgagcacc accaatccgg ccttctgttc gttcaccacg tcgctcagta cccgcgcgac
     2101 cggtccggga cgaacgctga gggactccag cactccatcg gggaccttcc ccctgagctc
     2161 tcgttcg
//
LOCUS       DASWKS010000585         5446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2188931, whole genome shotgun sequence.
ACCESSION   DASWKS010000585 DASWKS010000000
VERSION     DASWKS010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5446
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2188931"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..2225)
                     /locus_tag="VGA78_16635"
     CDS             complement(174..2225)
                     /locus_tag="VGA78_16635"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9895559.1"
                     /translation="MAIGAALVGGAAAAQSPPTCQAGKTALVLSGGGAKGIAHIAVLR
                     VLDSLGARPDLIVGTSMGSIIGALYASGHDSRAIDSIARELSPAELFARADPQSPRPW
                     RPLRPLLVWVQGESGLALRSPGVDEPRTNGMLSAMLLRGNLLARGDFDSLPIPFRAVA
                     TNLATREPVVLDRGDLAQAVRASIAVPLVFPPEPVDSLLLTDGGLSANIPIAVARELG
                     ATRVIVSDVTGPLRPARNLSSPLEVAEQLAGFLFQQAPANLDSGDVYVKVDVRGFANL
                     DFSPESLERLRQNGRLAADSVLPRAACLPRAPERPRPLPAGVEGFELNGGIRSDATVI
                     ERVLGIAAGNALDESELRIQLRHLTEVDTYDAFWLGPEGEGERVRFRSVVRRAPPRLA
                     GVTVAYDNDLGGRLGAMYLDRHLLGTSYELSGVAGLSRIQTDLTFGLRRYFGYGRFRV
                     APALTARVAEEKIIRYSEAGEELGRPSTREAVFFAGLERELGGSWVVTVGGDARFWRE
                     ADTTTARSGGETGRSGGVLIRMTGGLGLVHLSGEAVISGTFRRVQGELSGAAHLGRLT
                     LAPSARLGWGQRLPLQNRFPLGGDEGFPGLAVEERRGDRELSAGLQAAWKLRDQVSLL
                     LLLAGGRIADGGGLFEDDGWLGGLRTGIGLDTAIGPVRLEYGAASNGRDQLFVRIGRW
                     F"
     gene            2320..2583
                     /gene="fdxA"
                     /locus_tag="VGA78_16640"
     CDS             2320..2583
                     /gene="fdxA"
                     /locus_tag="VGA78_16640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEX9895560.1"
                     /translation="MTYVITEACIGVKDRSCVDVCPVDCIYEGEDMLYIHPDECIDCG
                     ACEPECPVTAIFPEDDVPANQEPYIAKNREVFEGDNPPVRPKR"
     gene            complement(2756..3553)
                     /locus_tag="VGA78_16645"
     CDS             complement(2756..3553)
                     /locus_tag="VGA78_16645"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX9895561.1"
                     /translation="MPDLTVNGVRLAVEDVGEGPAILFVHGFPADASLWQHQIAGLNG
                     YRRVAPDLRGMGHSDAPASGYSMASYAADLRVLLDKLVVDRAVLCGLSMGGYVVFECR
                     RLWPERISGVVLMDTRAEPDSEEAQRSRDTLIAETRASGAAAVVAALLPKLLGATTVE
                     RQPEVVAQVRRMILGTPVAGIVGALEAMKVRPDSRPLLPDLAALPVLVVCGDEDTVTP
                     PDTARAMAAAIPGAALEIIPEAGHFAPLERPDLVTTVLHRFLDAAKM"
     gene            3721..4851
                     /locus_tag="VGA78_16650"
     CDS             3721..4851
                     /locus_tag="VGA78_16650"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HEX9895562.1"
                     /translation="MASQEDFARLMAELEPETVLAVDTEAASFHRHLDRIYLIQVSTR
                     EQTAIIDPLAVPDLRGFGALLADPAIEIVFHDADYDLRLFDLQYGFHATRLFDTRVAA
                     ELINEPGLSLAALLEKHLSVKVDKRFQRADWSARPLTPAMLAYAAGDTSHLVELRDLM
                     AEKVTALGRMAWALEEFEQLTRVRWTNDPDREPGWLRIKGAKALPPRELAILRELHRW
                     RQEVAQRTDRAEFRILGNEALLAIAHEAPTAPEALGAIKGVGKETAERRGRAIVAAVR
                     RGQRLPEKELPRVERNPRRQREPEVESRLARLKEARTTITGRLELAPGVVCPNSVLET
                     IARQVPDTLDGLAQIPGIRRWQVASFGDELLVAVRNGRRNEG"
     gene            complement(4988..5287)
                     /locus_tag="VGA78_16655"
     CDS             complement(4988..5287)
                     /locus_tag="VGA78_16655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HEX9895563.1"
                     /translation="MITPETVRKALRQVKDPELGLNIIDIGLVYDVAVTPEGDVTVKM
                     TLTSPGCPSGAEIMQDAKLVVEELEDVRSTTIELVWEPYWTPEKMDPRVKAFMGF"
BASE COUNT          965 a         1887 c         1756 g          838 t
ORIGIN      
        1 tggttctgac gagggaggag ggaggaggga ggagagggga atgaactgga gagtgccgaa
       61 tgcccaagtc ccaatgcaga agtagggggg agggcgggac cctctgcaat gggcattggg
      121 cattcggcac tctccagttc attcccctct cctccctcct ccctcctccc tcgtcagaac
      181 catcgtccga tccgcacgaa gagctggtcc ctcccattgg acgcggcgcc gtactctaac
      241 cggaccgggc caatcgcggt gtccagtccg atcccggtgc gaaggccgcc cagccagcca
      301 tcgtcctcga acagaccgcc tccgtcggcg atgcgcccgc cggccaacag caacaggagc
      361 gagacctgat cgcggagctt ccacgcggcc tggaggcccg cggacaattc gcgatcaccc
      421 cgccgctcct ccaccgcgag cccggggaat ccttcgtcgc cgcccagcgg aaagcgattc
      481 tggagcggca atcgctggcc ccaacccagg cgcgcgctcg gcgccaacgt gaggcggccc
      541 agatgggccg cgcccgacaa ttcgccctgc acccggcgaa acgtgcccga gatgacggct
      601 tctccggaca ggtgaaccag gcccagtcca cccgtcatcc ggatcagcac gcccccgctt
      661 cggccggttt cgcctccgct ccgcgccgtt gtggtatcgg cctcgcgcca gaaccgcgcg
      721 tcgccgccga ccgtcaccac ccagctgccc cccaactcgc gctccaggcc ggcgaagaac
      781 accgcctcgc gggtcgaagg ccgcccgagc tcttcaccgg cttcgctgta gcggatgatc
      841 ttttcctcgg ccacccgggc ggtaagggcg ggcgccactc gaaaccgacc atatccgaaa
      901 tagcgtctca gaccaaatgt gaggtcggtc tggatccggc tcaatccggc cactccgctc
      961 agctcgtaac tggtgcccag cagatggcgg tcgagataca tggcgcccag ccggccgccc
     1021 aggtcgttgt cgtacgcgac ggtcacgcct gccagccggg gcggcgcgcg gcgtaccacg
     1081 ctccggaagc gcacccgctc gccttcacct tccggcccga gccaaaacgc gtcgtaggta
     1141 tcgacctcgg tgaggtgccg cagctggatc cgaagctcgc tctcatccaa cgcgttcccg
     1201 gccgcgatcc ccaacacccg ctcgatcacg gtcgcatcac tccggattcc gccgttcaat
     1261 tcgaacccct cgaccccggc cggcagcggg cgcgggcgct cgggggcgcg cggcagacat
     1321 gcggcccggg gcagaacgga atccgcggcg aggcggccgt tctgccggag ccgctccagc
     1381 gactcgggcg agaaatccag gttggcgaag ccgcgcacgt ccaccttcac gtacacgtcg
     1441 ccggaatcga ggttggcggg ggcctgctga aacaggaacc cggccagctg ctccgccacc
     1501 tcgagcgggc tggaaagatt ccgggccggc cggagcggcc cggtgacgtc ggagacgatc
     1561 acacgggtgg cgcccagctc gcgcgccacc gcgatcggga tgttggccga gagccccccg
     1621 tcggtgagga gcagcgagtc caccggctcg gggggaaaca ccaacggcac cgcgatgctg
     1681 gcccggaccg cctgtgccag atccccgcgg tcgagcacca ccggttcgcg ggtggccagg
     1741 ttggtggcta cggcacgaaa gggaatggga agggaatcga aatcgccgcg cgccagcaga
     1801 ttgccgcgca gcagcatggc cgagagcatc ccgttggttc gcggctcatc cacgccggga
     1861 cttcgcaagg cgagcccgga ttcgccctgc acccagacca gaagcggtct cagcgggcgc
     1921 cacggccggg ggctctgcgg atcggcccgg gcgaagagct cggcgggtga cagctcccgc
     1981 gcgatggagt cgatggcgcg gctgtcgtgc ccgctggcgt agagcgcgcc gatgatcgat
     2041 cccatgctgg tcccgacgat cagatcgggg cgggccccta gactgtcgag caccctcagc
     2101 accgcgatat gggcgatgcc tttggccccg ccgccggaga gcaccagcgc ggtcttgccc
     2161 gcctggcagg tggggggaga ttgggccgca gcagcgcctc ccacaagcgc cgccccgatg
     2221 gccattaacg ctacggcatt ccccttgcgt ccccgggagc cgattcttat ctctatgcca
     2281 gcgaccgggc cgggggctcg gcgacggagg attctctgca tgacgtatgt gatcaccgaa
     2341 gcgtgcattg gggtcaagga tagaagctgc gtcgacgtct gtcccgtcga ctgcatctac
     2401 gagggggagg atatgttgta catccacccc gatgaatgca tcgactgcgg tgcctgcgaa
     2461 ccggaatgcc cggtgaccgc cattttcccc gaagacgacg taccggccaa ccaggaacct
     2521 tatatcgcga agaaccggga agtgttcgag ggggacaatc cgccggtacg acctaaacgg
     2581 tagtcgcctc gcccgtcgcg accaggaaaa gaaagccggc cccggagctg caagtgcccc
     2641 agggccgaca aggagggatg atactggaac agcggtggtc caatggatat tagaccgggt
     2701 ccgctatctc tatagacgcc tgagaccccc gaaaagttgc acacgtccct ccccctcaca
     2761 tcttcgcggc gtccagaaac cgatgtaaca cggttgtgac caagtcgggc cgttccagcg
     2821 gcgcgaaatg gcccgcttcg gggatgatct ccagcgccgc gcccgggatc gcggcagcca
     2881 tcgcccgagc cgtgtcgggt ggcgtcaccg tgtcctcgtc accgcacact accagcaccg
     2941 gcagagccgc caaatccggc agcaggggcc ggctgtcggg ccgcaccttc atcgcttcca
     3001 gcgcgccgac gatccccgcg accggcgtcc ccagtatcat gcgtcgcacc tgcgcgacga
     3061 cctccggctg ccgttcgacc gtggtggcac ctaacagttt gggcagcagg gccgcgacca
     3121 ccgccgcggc ccccgacgcg cgcgtctcgg cgatcagagt gtcgcgggac cgctgcgcct
     3181 cctcgctgtc gggttcggcc cgggtgtcca tcaacaccac gcccgagatt cgctcgggcc
     3241 agagacgccg acactcgaag accacgtagc cgcccatcga gagaccgcac agcaccgccc
     3301 gatccaccac cagcttgtcg agcaataccc ggaggtcggc ggcgtagctc gccatgctgt
     3361 acccggaggc cggcgcatcc gaatgtccca tgccgcgcag atcgggggcg acgcgccggt
     3421 acccgttcag tccggcgatc tggtgctgcc acaggctcgc gtccgccggg aagccatgca
     3481 cgaacaggat cgcgggacct tcacccacgt cctcgaccgc caggcggacc ccgtttaccg
     3541 tcaaatcggg cataccggcc aaggtagggt gcctcggggc ggctgcgcta cctttccgga
     3601 cggtccaggc cgaggtacag ccccagcccc ggtccggatc tgtcgccgca agtcattgag
     3661 agagttggtg ttatgccaca agccacagct gaatcttcga gcctgaccga gcctcggctc
     3721 gtggccagcc aggaggattt cgcccggctg atggcggagc tggaacccga gaccgttctg
     3781 gcggtggaca ccgaggccgc cagcttccac cgccacctgg accgcatcta cctgattcaa
     3841 gtatccaccc gcgaacagac cgcgatcatc gatccgctgg cggtgccgga tctgcggggc
     3901 ttcggcgcgc tgctggccga tcccgcgatc gaaatcgttt ttcacgatgc cgattacgac
     3961 ctccgcctgt ttgatctcca gtatggattc cacgccacgc ggctgttcga tacccgggtc
     4021 gcagccgagc tgatcaacga gcccgggctg tcgctggccg cgctgctgga gaaacacctg
     4081 agcgtgaagg tcgacaagcg gttccagcgg gccgactggt cggcccggcc gctgacgccc
     4141 gcgatgctgg cctatgccgc gggcgacacc tcccatctgg tcgagctgcg cgacctgatg
     4201 gcggaaaagg tcaccgcgct gggccgcatg gcgtgggccc tggaggaatt cgagcagctc
     4261 actcgggtcc gctggaccaa tgacccggac cgcgagccgg gctggctgcg gatcaagggc
     4321 gccaaggccc tgccgccgcg cgagctcgcc atcctgcgcg agctgcaccg ctggcgtcag
     4381 gaagtggccc agcgaaccga tcgggccgag ttccgtattc tcggcaacga ggcattgctg
     4441 gcgattgccc acgaggcgcc gaccgcaccg gaagcgctgg gggcaatcaa gggcgtgggc
     4501 aaggaaacgg ccgagcgcag aggccgagcc atcgtcgcag ccgtgcgacg ggggcagcga
     4561 ttgccggaga aggagctgcc ccgggtggag cggaaccccc gccggcagcg cgagcccgag
     4621 gtcgagtcac ggctggcgcg gctcaaggaa gccaggacca ccatcaccgg ccgactggag
     4681 ctcgcccccg gcgtggtctg tcccaacagc gtactggaaa cgatcgcgcg tcaggtaccg
     4741 gatacgctcg atggtctggc gcagattccg ggaatccggc gctggcaggt ggcgagtttc
     4801 ggggatgaac tacttgtcgc cgtcaggaac gggagaagga acgagggctg agggcggagt
     4861 gaatgcagag tgcccaatgc ccaatgccca tggcagaagt atggcagagg ggtgagaccc
     4921 tctgcattgg gcattcgcca ttgggcactc tcaattgatt cccccctcac ccctcccacc
     4981 tcccacctca aaagcccatg aatgccttta ccctcgggtc cattttctcc ggcgtccaat
     5041 agggttccca caccagctcg atggtcgttg agcgaacatc ttccagctct tccaccacca
     5101 gtttcgcgtc ctgcatgatt tccgcgccgg aggggcagcc gggggatgtg agggtcatct
     5161 tgaccgtcac gtcgccctcg ggcgtcaccg ccacgtcgta gaccaggccg atgtcgatga
     5221 tgttgagacc gagctcgggg tcctttacct ggcgcaatgc cttgcggacg gtttcgggcg
     5281 taatcacact cacctccctc ttgaggtacg aaagctaacc caaggtggga gggaggagtg
     5341 aatggagagt gcccaatgcc cagtgcccaa tgcagagggg gggtccccat ctgccttacc
     5401 tctgctttgg gcattcggca ttcggcactc cgaattcact cccccc
//
LOCUS       DASWKS010000586        23650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2911806, whole genome shotgun sequence.
ACCESSION   DASWKS010000586 DASWKS010000000
VERSION     DASWKS010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 23650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23650
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2911806"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VGA78_16660"
     CDS             <1..597
                     /locus_tag="VGA78_16660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX9895564.1"
                     /translation="DKFVARLEEAANGMRLGSGLAKDTDVGPLIHQAARDKVERYVQI
                     GKEDGAELVAGGRRGTGTRLSKGWFYRPTIFAGVRGNDRLAQEEIFGPVLSVIRFNSF
                     DDAVRINNSVRYGLSSSLYTQDVHLAFRAMQRLDNGITYVNAPTIGAEAHLPFGGVKQ
                     TGNGHREGGWEVYHFYSETKVCYVDYSGMLQRAQIDNY"
     gene            784..1653
                     /locus_tag="VGA78_16665"
     CDS             784..1653
                     /locus_tag="VGA78_16665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9895565.1"
                     /translation="MRPIQVGSSRHSSSTDEGSLDQYLRDISRYPLITQDEEVNLAQR
                     IRTGEEEALDKLVRSNLRFVVSVAKKYQNQGVSLADLINEGNLGLIRAAHKFDETKGI
                     KFISYAVWWIRQAILQALAEQSRIVRVPLNRAGTLHKITRRSSALLQELGREPTPAEI
                     AEGMDIEMEEVQKTLSISQNHLSLDAPLTPGEDNRLLDYLPDTQNAGPDAETFEHALT
                     QSIEEVLTTLKEREAKILRLYFGLDEPEPLTLEEIGSRLGITRERVRQIKEKALSRLR
                     HVSRAKALESFLS"
     gene            1653..2906
                     /locus_tag="VGA78_16670"
     CDS             1653..2906
                     /locus_tag="VGA78_16670"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HEX9895566.1"
                     /translation="MPAGTARAGIPLVALLLAACYGVETGAGPPAGVVAESSAPEVYV
                     ALTRGASGVEVGGGGPVRVLDGEGQPIAELPAGTVARAATQGDRVGLHVAGMRLGPSL
                     TLELWPRDSGTVRIADREYRGRVAITATTTGLLVVNRVGIEDYLAGVVNAEMGRRAPG
                     EEAALEAQAIVSRTFALRVVGRWRTQGFDLLATISDQAYTGVASETPAGRAAVAATRG
                     LVITYADQPIEAFFHSTCGGRTAGGAEAFVNGGLPYLQSVVDQGPTGQSWCAISPRYQ
                     WREEWTGEQLRATLRTTLPAAAGVSATRVTEVRDVVVTDRSSSGRVASIRIQLGTSGV
                     PVTGQTIRHVLRPEGAPLLRSTTFEVQATRSANRLIRLVLEGHGNGHGVGMCQWGAVG
                     RARAGYGAEQIVAAYFPGTTLERRW"
     gene            2973..3986
                     /locus_tag="VGA78_16675"
     CDS             2973..3986
                     /locus_tag="VGA78_16675"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9895567.1"
                     /translation="MSDILRLGVIGAGAVLQVAHLPVLKKLRTVQVSALCDSDVPKAR
                     ALASRYGVPSVYDDIEDLLGHEQLDVLLICTPNHLHEPHILAALSAGLHVLVEKPVAL
                     SSQSVQRIIRASDRAGRVVMVGMNHRYRPDTQAIRSFVQGGELGELDSIRAGWHVARP
                     TRAPLGWRQRREESGGGAMLDLGLTMLDLCFWMAGNPVPTRVSASLAYAGRSDRAVEQ
                     SGSALVHCEGGLSIFVDVTWRYIGEGEYFGAGVRGAKGSASLNPLRVWKEMHGTVHDV
                     SPSGSGNRENLFIAAFRAQWAHFLAALRGEAPPPLLDEQVTVLKVLEAIYRSAADGRD
                     VTL"
     gene            3983..5227
                     /locus_tag="VGA78_16680"
     CDS             3983..5227
                     /locus_tag="VGA78_16680"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HEX9895568.1"
                     /translation="MIPLFLALVLTGPAQQQPPPFEVPPAHDGRRLAVYLVTFGPGPQ
                     IWERFGHNAILIRDTVTSESVAYDYGRFSFEEKRFLIGFARGRMQYWMGREDGVALLN
                     SYIRRQRSAWMQQLALPPADRIRLRELLEADYEHDRGRYRYDYYRDNCSTRLRDAIDS
                     VIGGAIRARLDTAASGVSYRWHTRRSLENNLINWFGVDAGLGPAADLPVSRYQETFLP
                     LMLRDYIRGVMIAGPDGQLVPLVKGELALAESDLWPVANAPTDWTLQFLLAGAALGGI
                     LLLLGRAAPAGWTRMVFGGLAGLWALFAAVGGAVLVFLAFFSEHAIAFRNENLWQFNL
                     LAVVLLPVLPGALRGEKTRGRVALALAWLVAVGSLAGLAMQGLPGRGQANGEIIALAL
                     PLHLGLAAGLTAAVRSRSRAPS"
     gene            complement(5199..5921)
                     /locus_tag="VGA78_16685"
     CDS             complement(5199..5921)
                     /locus_tag="VGA78_16685"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEX9895569.1"
                     /translation="MNHRGVLGNRWSLLAGAALAAALPLGAQQGDSRPGIAVLPFENG
                     GSYGQDRENYEALRRGIAGLLISHLAQNPSIRLVERSESQRLLDEQSLGAAGRVDRET
                     AARVGRLVGARYMIAGTFIDLYGDFRVYARIIDVETGEILQVARPDVKLRELRDLDRM
                     TQTLAVSIMTTTKLPSLPPTTRLASRTIPPEAMTMYSRALLYEDRGDKAKAIEYYQMA
                     IDKFPEFTEAKEGLRKARGSGT"
     gene            complement(5926..6756)
                     /locus_tag="VGA78_16690"
     CDS             complement(5926..6756)
                     /locus_tag="VGA78_16690"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9895570.1"
                     /translation="MRGSIPCPGPRTVRYGGNTPCVTLEHPEGDLVILDAGTGIRELG
                     MALRDRGGTVAADLLLSHIHWDHIHGLPFFFPLYTEGTRIRIFGPRHQSGLRSLLGRQ
                     MTWEMFPIPASAQVGIEDVVELDGEAFPAGGWEAGAFRLCHPGPTLGYRFTRKGVEPL
                     AYITDNELAGRVHGVTAAWRDDLVDFLQGVHTLVHDATWSDDRLESVAGWGHSTSRQA
                     VELARDAGCRRLVLFHFNPEHDDHTMDRQLTEARSVAQAIAPGLDVVAAIEGHTLALE
                     "
     gene            complement(6887..7561)
                     /locus_tag="VGA78_16695"
     CDS             complement(6887..7561)
                     /locus_tag="VGA78_16695"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX9895571.1"
                     /translation="MSSPVEVLRKVPLFSGLSEADLEGFAPVLRERRFPKGSVIMMQG
                     ERGDALYLLAEGQVKVVLIGEDGREVILSVLGPGSFFGEMALLDDEPRSAHVVAMDDS
                     LLLLLRREDFQSRLRSSPDVAFGLLRELSQRLRRADDTIGSLALRDVNGRIAHLLLEL
                     AQEEGGDRITRRLTHATIAQMVGASRETVSRTLSTLASTGVLRMTRREIVLIDKEPLR
                     RAAQRA"
     gene            7819..8031
                     /gene="rpmE"
                     /locus_tag="VGA78_16700"
     CDS             7819..8031
                     /gene="rpmE"
                     /locus_tag="VGA78_16700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003151132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEX9895572.1"
                     /translation="MKPNLHPPYRTLMVECACGNKFETRSTATSIHVEVCSQCHPFFT
                     GKQRLMDTAGRVDRFRRKYATEPTKA"
     gene            8034..9095
                     /gene="prfA"
                     /locus_tag="VGA78_16705"
     CDS             8034..9095
                     /gene="prfA"
                     /locus_tag="VGA78_16705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEX9895573.1"
                     /translation="MDALLRQALERAEEVARQLADPATAREAGRLQALGREHARLAPI
                     QRKAERLLRLQDELRQAQELAGDAADPEMSALAWLDIDRLPGEIAALETELHELLLPR
                     DPLEDRDAIIELRAGTGGDEAALFAADLFRMYTRFVERHGLKVEVMELSEGTLGGVKE
                     VVAAVRGTGAYGLLRRESGVHRVQRVPATENQGRIHTSAATVAILPEAEEVDVKIEPQ
                     DIRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSQQDQKSQLQNKIKAMEVLRARL
                     LDKRISEQEAARAAERRTMVGTGDRSAKIRTYNFPQSRVTDHRINLSIHNLAEVMNGD
                     LDQLVDALRVASREEQSRA"
     gene            9088..9984
                     /gene="prmC"
                     /locus_tag="VGA78_16710"
     CDS             9088..9984
                     /gene="prmC"
                     /locus_tag="VGA78_16710"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX9895574.1"
                     /translation="MPDIREQEAGTREQEAGTRERATALHQAIADLAAAGIPEPRREA
                     LLIWSELAGPTPGATLVLPDARLSADLAVRFRQAVARRAAGEPRQYVVGTVGFRRLIL
                     GCDRRALIPRPETEGLVDLALARGSTGRALDLGTGSGCLALALADEAAYDEVVGIDRS
                     PAALALARENGTRTGLSVRWVLGDWVKPVSGERFDVIVTNPPYIAAGELRALHSSVRD
                     WEPEMALNGGPDGLAEARRILTLAPAILRAGGWLFMELDAARAAVTAEVATASGWRAV
                     RVLDDLYRRPRYLAAQWEPDNA"
     gene            9977..10327
                     /locus_tag="VGA78_16715"
     CDS             9977..10327
                     /locus_tag="VGA78_16715"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HEX9895575.1"
                     /translation="MLDEKAVDLGRMIGQSSEYQALRRSEQSLRSDQDAVARLERIQE
                     LARQVDVAISRGELPDEATTQAYEQAVRELELSPSGQSYVVARANFDKLMARVNHQIS
                     QGIEKGATSSIITL"
     gene            10327..10959
                     /gene="tmk"
                     /locus_tag="VGA78_16720"
     CDS             10327..10959
                     /gene="tmk"
                     /locus_tag="VGA78_16720"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX9895576.1"
                     /translation="MARGCFVVLEGPEGSGKSTLAPQLAEWLRNRRIDVLLVREPGST
                     PVAEALRAELLVADRHWTPEMELLYYVTARADHVTHVIRPALEAGRLVMSDRYEMSTR
                     AYQGAGRGVDRDHLEWVNRAATGGLVPDLTLVLALPADTGLERLRASGRRPDRLDRES
                     LEFHRRVAAYYQAVQGPGIRHLDATQPLDQLLPLAVAELRAVIPQLVLEP"
     gene            10956..12500
                     /locus_tag="VGA78_16725"
     CDS             10956..12500
                     /locus_tag="VGA78_16725"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9895577.1"
                     /translation="MMGRRGFTLMILLAGGVSAAGYLLLSRPAREGYQPIQPTRLFEQ
                     VFSHVRRFGVDSLPESDLYRLAANGLLGELDDEYATLLQQGSEAGLTETADVGGMGLL
                     LAARDGRISVLSVLPGSSAELVGLAPGDQLVGVNDTQLDAGRRDQVLAALSGPAGSLA
                     QVRVRRPGIGPLTFPVERSQPRRSLVQPARKLDNRVGYVAVRLLGPGAARSVRQGVEQ
                     LFEDGAQGLILDLRGASQGALDEGVALADLFLDPGAKLMELRGRAPEPRRWGDDQPQD
                     RRMSGLAVVVLIDSTTADAAEITAGALQDNDRALLLGQPSFGRGLSAETFPLTEKMIV
                     RISTGRWFTPTGRPIQRDTATSDTLEQRPRVSTARGRSVYAGGGIVPDSLVGRDTLPT
                     TEQAFLRAVGSQFPVWRSVVSSVARLLVAGAANPEPGIVSSEARARLRAALDSAGLVV
                     PDDTWNHAGPALDQRLGDEMVRLARGEDALLARRLRRDPVVRRAMGLLHAARSPIALV
                     MGTGER"
     gene            complement(12755..13399)
                     /locus_tag="VGA78_16730"
     CDS             complement(12755..13399)
                     /locus_tag="VGA78_16730"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer-membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX9895578.1"
                     /translation="MKLVAMLLLLAAGAGSAAGQSATDIAARASRTYRSFGSIRASFH
                     QVIEDRMIGTQESRGELVQSGTAHLAMRFSDPKGDMIVLDGTYLWLYTPSTTPGQVIR
                     MPIPSDPVYGPNVLARILDKTTDRYQIEWLGADSVENRTVDVLEFIPTSDDPLFSRAV
                     ISFDRQTLVPRRLELDERSGVRRTLTLSRVRTNATVSRSEFVFEVPNGVRVVDR"
     gene            complement(13396..14439)
                     /gene="aroF"
                     /locus_tag="VGA78_16735"
     CDS             complement(13396..14439)
                     /gene="aroF"
                     /locus_tag="VGA78_16735"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX9895579.1"
                     /translation="MLIVLHPGATAAELERLREVLASLGAEARPVEGPVGRQALVVSA
                     AIAPADGARLTSLPGVDEVIWGGPHHHLASRDWHPEPTRIRFANGVTVGGDDVIVIAG
                     PCAVEGEAQLLETAHRVAESGAQFLRGGAFKPRTSPWSFQGLGPAGLELLERARQETG
                     LLVVTEALDPDTVDQVAQVADVIQIGSRNMANPPLLKRVAQTGRPVLLKRGMAATLQE
                     LLLAAEYLLAEGNGNVILCERGVRGFDGSTRNVLDLAAIPLLHQLSHLPVIADPSHGT
                     GRRSLVPAMARAALAAGADGVMVEVHPDPDLAHSDGEQSMLLEDFPALMRELHGVARA
                     VGRRVAPGLGVRT"
     gene            complement(14449..17922)
                     /gene="smc"
                     /locus_tag="VGA78_16740"
     CDS             complement(14449..17922)
                     /gene="smc"
                     /locus_tag="VGA78_16740"
                     /inference="COORDINATES: protein motif:HMM:TIGR02168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEX9895580.1"
                     /translation="MKLTRLELSGFKSFADTVTLNFEEGVTAIVGPNGCGKSNVSDAV
                     RWVLGEQSARLLRGGKMEDVIFQGSTARRPVNVTEVSLHLDNVDGTLPIGYQEVVVTR
                     RLSRSGHSEYLLNNAPVRLRDIQDLLRGTGMGSDAGVVIEAKMIDLLLSDRADERRSL
                     FEEAAAIGLYRDRKYATERRLEETAADLQRLEDLLNEVQSQIRSLARQKGRAERHAKL
                     TEEKFTVQLTLARRLLDRLAEQASDMEARYTQLSTDLPGIRRDLAEKTSEQEQRARER
                     ATAEAHRGNIQRELSEAQIALAKLDADIAVAAERASGASQRRQRADEERRLLELRSQQ
                     AQLEEAAAGSERSDAEREHQQIQLELSGRSTTEDEMRQRLTRQRELVRRLEQELAACA
                     QSLRSLEGERGALDGELASLRERAEVAAAHRQALQADLGEAERRSREAAEVAAVRARD
                     AQAAAADAERARHLLAGTREREVGERAVVRQAEESLAQLSARRQALEELERDRVGLAP
                     GAAALLAERHRFGEGILGPLSDYLSSERQDAELAERLLGDLVHAVLVHDWDVVQRIQD
                     WHADAQPGALVLLPVEPGPALRNLGAHPLTNRLRAEGPAAAWVDALVGGSEVLEGTGR
                     VLRRPSGAVHLGGAASPTGPIRRRADLAQLSTDVFRQDAVLGEATRALVATRERLEAL
                     ERETEEAAERWTAAQEAERLAAGARDDANRRLATLKRELHDSELSLGRIQERIGQAEQ
                     RLGEVDSGFTEAELSRARLDEQLGNARTALAALESDQEGAREARLQWQVQEAHLGARL
                     RAAAERLERATHTIGEAGGAVQSLNQELAGLDLETRELSAQMSQWEEQRAEGRAALHA
                     QRVALAQAEATLARADEALVGTERLLSDLRMNAELLTEEHHRLQLELTEVSASRRSIR
                     ERVEHEWRAPLERLLQGAQLLDLDLEALETESGRIVSSLEAIGPVNPLAVEEHAEETK
                     RYEFLITQRDDLVAARQSLLQAIREIDGTARTMFLETFQAIQVNFVQVFQTLFGGGEC
                     ELRLSLPDDPLESEIEIHAAPRGKRTQRIHLLSSGERTLVATSLLFAIYLTKPSPFCL
                     MDEVDAPLDDANVGRFTTLLDEFKSRTQFLVITHNPRTMQAADAVYGVTMQEPGVSTI
                     VGVRLGEHTPA"
     gene            complement(17959..19215)
                     /locus_tag="VGA78_16745"
     CDS             complement(17959..19215)
                     /locus_tag="VGA78_16745"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX9895581.1"
                     /translation="MAFRPDSLLPWGWSSSGGVPALARALGYDLDERIVWAVDENARL
                     VGIDLESGGWRTYLSGVRRAAVGPDGSVLVVDSSGRLVRLQRRTPAVLSASFRRPPVA
                     LWGAINGQALALSADSAPGVRLISPERSGPPASVSEGPVAPSFWGEIVAVSEGDQLRL
                     VRTTDGSTLRTIDLPGPPAQVLFSPSGHRVYALVGDEVTVADRFSGERLQSIALPGEA
                     RQARADPSGRWMVVRPASGDSAWVVDLATGRHVATLETEWREDLPLIAGAATLVVHNG
                     KSVDAYNLAAVPPERMTTVAGGAKDLWMVIPWVPPQRAPRALAAVETAVVQQDQALVT
                     DSTPSATLEEHWLQVSSSQNPDWADDLAEQLRDAGHPAGVWRPETPEESYRVVVGPYP
                     TRAVAEEAGRRLGRPYFVVQRGSREP"
     gene            complement(19362..22619)
                     /locus_tag="VGA78_16750"
     CDS             complement(19362..22619)
                     /locus_tag="VGA78_16750"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX9895582.1"
                     /translation="MSNAARMVVAGLALGVLSPGTAAAQYFGRNKVMYAKFDFKIIQT
                     QHFDVHYYDREAEAALDVSRMAERSYAKLARILNHEFNERKPILLYASHSEFQQTNLA
                     GGDIDESTGGFTDYLLHRNTFPLTGSYDDVEHVLQHEMVHQFQFDIWSRGRGISGVQG
                     IYQVNAPLWWGEGMAEYLSIGPVDPNTAMWLRDAALEGKLPTARDFYRIFPYRFGHAL
                     VSYIGARWGDEAVGQITKSATGSSIELAIRRVTGLSFEMLVDQWRDAVQKQFLPEVGA
                     RVKARTLATPLLNEENSDGTWHLAPALSPDGSLVAYFSEKDFFFVDLYLADGNTGKPI
                     RRILESSYSSNYETYRFLYSSVSWSADGKYLAFAAKREGKDDLVIVDPRRNKEIKRIK
                     VPISGITAPAFSPDGQRLVFSGLGGGISDLYTVGVDGKNLERITNDRYAELHPTWSPD
                     GKTIAFVTDRGPGTDFERLIWGPLRVGLYDVASGKIDLPEGMGVGRNVSPQWAPDGQG
                     LAFVSDRNGVNNIFIYEVSEGLAYQLTDFYTGVSGITPLSPALSWSALSDRLAFVYFE
                     QGKYDVYSLSSPRLLKKEPWREGKVTPAFIVARPEAAPAGPALASRAPAAVPGRGLQQ
                     PKPPFVLSGRSLYRTREGFRASDSLGAIADSLRGPEPVSIARILDSTSFDLPDTAEFT
                     RKSYKVKFNPEYVSQPSIGYARDNFGRALYGQATIVLGDMLGDHRLAFATTLNGRLEE
                     TALLGQYANLSRRVAWTLGLEQQPYYGYGAAGSIEGETPGEAIFIQQFRRLIYRTLFG
                     AAYFPTSRFRRWELGLQLVNADDDLLQYSQPYDLGTGFPTGEVVRETIPLDNHSYAMP
                     SLALVYDNSLFGYVGPFMGRRSRIEIAQSLGSWQFTQGTFDYRRYDRIAGPIRLASRF
                     FYFGRRGRDAEQFTFFGGTTELIRGHTYGSYQRNECLFGQDPAQGCAVNNLIGSQVAI
                     ANIELRFPLLNAALAVLPIPLPGIEGALFYDIGMVWDNNSVIKWDRSPNDPYVDFADV
                     SGSTGRREVRDPVQAWGASIRGNLLGFLILRLDYARPINRPGVKQLWTLSLGPTF"
     gene            complement(22616..22966)
                     /gene="rsfS"
                     /locus_tag="VGA78_16755"
     CDS             complement(22616..22966)
                     /gene="rsfS"
                     /locus_tag="VGA78_16755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX9895583.1"
                     /translation="MVEAIEDRKGRSISVIDLRGVNDATDFFVIASGTSDAHVRGICD
                     AVLERLETSGFRAHHVEGVTGGRWVLIDFVDFVVHLFHPQARAFYQLERLWSDAPVVF
                     SGPGGDQKGWSGQL"
     gene            complement(23001..>23650)
                     /locus_tag="VGA78_16760"
     CDS             complement(23001..>23650)
                     /locus_tag="VGA78_16760"
                     /inference="COORDINATES: protein motif:HMM:NF014679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005504 - fatty acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEX9895584.1"
                     /translation="EDVVVVLVSGVLSGTFNAGQTAARVAGLSRVHFVDSRTVSLGQG
                     MLVLRGAELAESGWPAEEIVRELDRIKRQAGMFLTVDTYENLLRSGRVSRGRAWLAGM
                     LDVKPIISLDGDGRLGPVDRARGREAVFRRILQLLDLRLTPRPKVVRFGVVHADAPEV
                     AERVRGALVAAFQPRDCFVAQASGVLGTHTGIGAWAVFYQVEDGTPTRLPGSVHG"
BASE COUNT         3801 a         7931 c         8088 g         3830 t
ORIGIN      
        1 gacaagttcg tggcccggtt ggaagaagcc gccaatggga tgcggctggg tagcgggctg
       61 gcgaaggaca ccgacgtggg gccgctgatc catcaggcgg ctcgcgacaa ggtggaacgc
      121 tatgtgcaga tcggcaagga ggacggcgcc gagctggtcg cgggcggacg ccggggcacc
      181 gggacccggc tgtccaaggg ctggttctac cgccccacca tcttcgccgg cgtgcggggc
      241 aacgatcggc tggcccagga ggagatcttc ggtccggtgc tgagtgtcat ccgattcaac
      301 agtttcgacg atgccgtccg aatcaacaac agtgtccgat acggcttgtc gagctcgctc
      361 tacacgcagg acgtgcatct ggcgtttcgc gccatgcagc ggctggacaa cgggatcacc
      421 tatgtgaacg cgcccactat cggggccgag gcccatctgc ccttcggtgg cgtcaagcag
      481 accggcaacg gtcaccggga aggcggctgg gaggtctacc atttctactc cgagaccaag
      541 gtttgttacg tcgactattc cgggatgctg cagcgggcgc agatcgacaa ttattgacga
      601 ttgacgattg acgattgtcg attgcggggt tggttccgag cgcattcgcg agcatcccga
      661 cgccccatcc gccaatcgtc aatcgtcaat tgtcaatcgt caatgggccg cgggttgcgc
      721 tcccgtccgg cgctgggtaa caattcagcc gttgggataa gttcccccga gaggttcagc
      781 ttcatgcgtc caatccaggt cgggtcttcc cggcactcgt cgtcgacaga tgagggctcg
      841 ctcgaccaat acttgcgcga catttctcgc taccccctca tcacccagga tgaggaggtc
      901 aacctggccc agcgaatccg gaccggcgaa gaggaggcgc tcgacaagct ggtgcgcagc
      961 aacctgcgtt tcgtggtctc ggtggcgaag aagtaccaga accagggcgt gtccctcgcc
     1021 gatctcatca acgagggcaa cctcggcttg atccgcgcgg cccacaagtt cgacgaaacc
     1081 aaaggcatca agttcatctc atacgcggtc tggtggatcc gccaggcgat tctgcaggcc
     1141 ctggcggagc aaagccgtat cgtccgggtg cccctcaacc gggcggggac gcttcacaag
     1201 atcacccgcc gctcttccgc cctgctccag gagctgggcc gcgagcctac cccggccgaa
     1261 atcgccgagg ggatggacat cgagatggag gaggtgcaga agacgctgtc gatttcgcag
     1321 aatcaccttt cgctggacgc cccgctgacc cccggggaag acaaccggct gctggattat
     1381 ctcccggata cccagaacgc cggccccgac gctgaaacgt tcgagcacgc cctcacccag
     1441 tcgatcgagg aagtcctcac caccctcaaa gagcgcgaag ccaagatcct ccggctctac
     1501 ttcgggctgg acgagccgga gcctctcacc ctcgaggaaa tcggcagccg cctcggtatt
     1561 acgcgggagc gggtacggca gatcaaggag aaggcgctca gccggcttcg ccacgtgagc
     1621 cgcgccaaag ccctcgagag tttcctctca tagtgccagc gggcacggcc agggccggga
     1681 tcccgctcgt cgcgctgctg ctggcggcct gctacggtgt cgagaccggg gcagggcctc
     1741 cggccggtgt ggtcgccgag tcatccgcgc cggaggtgta cgtggcgctg acgcgggggg
     1801 cgtccggcgt tgaggtgggc gggggtgggc cggtccgggt gctcgacggc gagggccagc
     1861 cgatcgccga gttgccggcc ggcaccgtcg cccgtgcggc gacccaaggc gatcgggtcg
     1921 gactccatgt ggccggcatg aggctcggtc cctcactcac cctggagctc tggcctcgtg
     1981 acagcggaac agtgcggatc gcggatcggg agtatcgggg gcgggtcgcg atcacggcca
     2041 ccactaccgg cctgctggtg gtgaaccggg tcgggatcga agactacctc gcgggtgtgg
     2101 tgaacgccga aatgggccgc cgggccccgg gcgaggaagc ggcgctggag gcgcaggcca
     2161 tcgtctcccg cacgttcgcc ctccgggtgg tgggtcgctg gcgcacccag ggattcgatc
     2221 tgctggcgac gatatcggac caggcctaca ccggcgtggc atcggaaacg ccggctggcc
     2281 gcgcggcggt ggcggcgacc cggggactgg tcatcaccta cgcggaccag ccgatcgagg
     2341 cttttttcca ttcgacctgt gggggacgga ccgcgggcgg cgccgaagcg ttcgtcaacg
     2401 gcggtctgcc atatctccag tcggtggtcg atcagggtcc gaccggccag agttggtgtg
     2461 ctatctctcc ccgctaccag tggcgggaag aatggaccgg cgagcagctt cgggcgactc
     2521 tgcgcaccac cctcccggct gccgccggcg tttccgcgac ccgggtgacc gaggtgcgag
     2581 acgtggtggt caccgaccgg agcagctcgg gccgggtggc atccatccgg attcagctgg
     2641 gcacctcggg ggtaccggtg acgggccaga ccatccgtca cgtgctgcgt ccggaagggg
     2701 ctccgctcct gcgcagcacc acgttcgagg tacaggccac gcgttccgcc aatcgcctga
     2761 tccgcctggt cctggaaggc cacggcaacg ggcacggcgt cggcatgtgt cagtggggtg
     2821 cggtgggccg ggctcgggcg ggctacggag cggaacagat cgtggcggcg tatttcccgg
     2881 ggaccaccct ggaacggcgc tggtagccgg ccgctctcgg tagctcaccg cccccggaac
     2941 tcagaacccg gaacgattat gttgtacccc caatgagcga tatccttcgc ctgggagtca
     3001 tcggggccgg cgcggtgctt caggtcgcgc acctccccgt gctcaagaag ctccgcaccg
     3061 tccaggtctc ggcgctctgc gacagcgatg tgcccaaggc gcgggccctc gccagccggt
     3121 acggcgttcc cagcgtctac gacgacatcg aggatctgct ggggcacgag cagctcgacg
     3181 tgctgctgat ctgcaccccc aaccacctgc acgaaccgca catccttgcg gccttgtcgg
     3241 ccgggttaca tgtcctggtg gaaaagccgg tggcgctctc gagtcagagc gtgcaacgaa
     3301 tcatccgggc ttccgaccgc gccggccggg tggtgatggt gggcatgaac catcgctatc
     3361 gtcccgatac ccaggccatc cgcagcttcg tgcagggcgg agagctgggc gagctcgaca
     3421 gcatccgggc cggatggcac gtggcccgcc ccacccgggc gccgctcggc tggcgccagc
     3481 gccgggaaga atccgggggc ggcgccatgc tcgatctcgg cctcaccatg ctggacctct
     3541 gcttctggat ggccggcaac ccggtgccca cgcgggtcag cgccagcctg gcctacgccg
     3601 gccggagcga tcgcgcggtg gagcagtccg gcagcgcgct ggtccactgc gagggcgggc
     3661 tgtcgatttt cgtggacgtc acctggcgct acatcggcga gggcgagtat ttcggcgccg
     3721 gcgttcgtgg cgccaaaggc agcgccagtc tgaacccgct ccgggtctgg aaggaaatgc
     3781 acggcacggt ccacgacgta tcgccgtccg gctccggcaa ccgggagaat cttttcatcg
     3841 ccgcgttccg ggcccaatgg gctcactttc tcgcggctct ccggggcgag gccccacctc
     3901 ccctcctgga tgagcaggtc acggtgctca aggtgctgga agcgatctat cgctccgccg
     3961 ccgacggacg cgacgtcacc ttgtgattcc cctgttcctg gcgttggtcc tcaccgggcc
     4021 ggcgcagcag cagccccctc cgtttgaggt tccgccggcg cacgacggcc gccgcctggc
     4081 cgtctatctg gtcaccttcg ggcctggtcc ccagatctgg gaacggttcg gtcacaacgc
     4141 gatcctcatc cgcgacaccg tcaccagcga gagcgtcgct tacgactacg ggcgcttcag
     4201 cttcgaagag aagcggtttt tgatcggctt cgcccgaggg cggatgcagt actggatggg
     4261 ccgggaagat ggggtcgccc tcctcaactc ctacatccgg cggcaacgtt ccgcctggat
     4321 gcaacagctg gcgctccctc ccgcggaccg gatccggctc agggaactgc tggaagctga
     4381 ttacgagcac gaccggggcc ggtaccgtta cgactattac cgcgacaact gctcgacccg
     4441 gctgcgggac gccatcgaca gcgtcatcgg cggcgcgatc cgggcccggc tcgacacggc
     4501 ggcatccggc gtcagctatc gctggcacac gcggcgctcg ctcgagaaca acctgatcaa
     4561 ctggttcggg gtcgatgccg gcctcggtcc cgccgccgat cttcccgtca gccgttacca
     4621 ggagacgttc ctcccgctca tgctgcggga ttacatccgc ggcgtgatga tcgcggggcc
     4681 ggacggccag ctggtgccgc tggtcaaggg cgaactggcg ctggcggaga gcgatctgtg
     4741 gccggtggcg aatgccccga ccgactggac gctgcagttc ctcctggcgg gcgccgccct
     4801 gggcgggatt ctactgctgc tggggcgggc cgcaccggcc ggctggaccc ggatggtctt
     4861 cggcggcctg gccggtctgt gggcattgtt cgcggccgtg ggcggcgcgg tcctggtttt
     4921 tctggcgttc ttcagcgaac atgccatcgc gttcaggaac gaaaacctct ggcagttcaa
     4981 tctgctcgcg gtggtgctgc ttccagtgct gcccggtgcg ctccggggcg agaagacccg
     5041 cgggcgggtg gcgctggcgc tggcgtggct ggtggcggtc gggtcgctgg ccggtctggc
     5101 aatgcaaggc ctgcccggtc gagggcaggc caatggcgag atcatcgcgc tggcactccc
     5161 gcttcacctg ggcctggcgg cggggcttac ggcggcggtc aggtcccgga gccgcgcgcc
     5221 ttcctgagtc cttctttggc ctcggtgaac tcggggaact tgtcgatggc catctggtag
     5281 tactcgatcg ccttggcctt gtcgccgcga tcctcgtaca gcagcgcgcg gctgtacatg
     5341 gtcatggcct ccggcggaat ggtccgggag gcgagacggg tggtcggggg gaggctggga
     5401 agcttggtgg tcgtcatgat gctcacggcc agcgtctggg tcatgcggtc gagatcccgc
     5461 agctcacgca gcttgacgtc ggggcgggcc acctggagga tctctcccgt ctccacgtcg
     5521 atgatgcggg catagacccg gaaatcgccg tacaggtcga tgaacgtccc ggcgatcatg
     5581 tagcgggccc cgaccagtcg ccctacccgg gccgcggtct cccggtccac tcgtcctgcc
     5641 gcgcccagcg actgttcatc cagcagccgc tgtgactcgc tccgttccac cagacggatg
     5701 cttggattct gggccagatg gctgatgagc aatccggcga tgccccgccg cagcgcttcg
     5761 tagttttccc ggtcctgccc gtacgacccc ccgttctcga acggcagcac ggcaatgccg
     5821 gggcggctgt cgccctgctg cgcgcctaac ggcaacgcag cggcaagggc cgcaccggcc
     5881 agcaggctcc atcggttacc cagcacccct cggtggttca agattctact ccaaagccag
     5941 cgtgtgtcct tcgatagctg ccacgacgtc gagacccggg gcaatggcct gggccacgga
     6001 acgcgcctcg gtcagttgtc gatccatggt gtggtcgtcg tgctcggggt tgaagtgaaa
     6061 cagcaccagg cgtcgacatc ctgcgtcccg ggccaactcg accgcctggc gtgaggtcga
     6121 atgcccccag ccggcaaccg actccagtcg gtcgtccgac caggtcgcat cgtgcaccag
     6181 ggtatggacc ccttgcagga aatctaccag atcgtcccgc cacgcagccg tcaccccatg
     6241 aacccggccg gccagctcgt tatccgtgat gtaggcgagc ggctcaaccc cttttctggt
     6301 aaagcgatat cccagggttg gaccggggtg gcacagccgg aacgcgccgg cctcccaacc
     6361 cccggccgga aaagcctcac cgtccaattc cacgacgtcc tcgatgccca cttgggcgga
     6421 cgccgggatg gggaacatct cccaggtcat ttgacgcccg agcaggcttc tgagcccact
     6481 ttggtgccga ggaccgaaga tccggatccg ggtgccctca gtgtagagcg ggaaaaagaa
     6541 tggcagaccg tggatatggt cccaatggat gtgactgagg agcaagtccg cggcgacggt
     6601 cccgccccgg tcgcggaggg ccatgcccag ctcccggatc ccggtcccgg catcgagaat
     6661 caccagatcg ccttccgggt gctccagcgt gacgcacggg gtgttgccgc cgtagcggac
     6721 ggtccggggg ccggggcaag ggatcgagcc gcgcacgccc caaaagcgga cggacggacg
     6781 ggctgacgga ctgacggact ggggcattta ggttctaaac cgcattgcag tcctcacccg
     6841 gaaaaggccg tccgtcggtc cgtcggtccg tctgcccgtc cgtcagtcac gcccgttggg
     6901 ccgcgcggcg gagtggttcc ttgtcgatca ggacaatctc gcgccgggtc atgcgcagca
     6961 ctccggtgct ggcgagcgtg ctcagggtgc gggacacggt ttcgcgactg gcgcccacca
     7021 tttgggcgat ggtggcgtgg gtgagccggc gggtgatgcg atcgccgcct tcttcctggg
     7081 ccagctccag cagcagatgc gcgatccggc cgttcacgtc ccgcagggcc aggctgccga
     7141 tcgtgtcatc ggcccggcgc agtcgttggg acaactcccg cagcaggccg aaggcgacat
     7201 cgggggagga gcgcaagcgg gattgaaaat cctcccgccg gagcagcagc aggagcgaat
     7261 catccatggc aacgacgtgg gccgaacggg gctcgtcatc cagcagcgcc atctcgccga
     7321 agaacgaccc gggcccgagc accgacagaa tgacctcgcg cccgtcctct ccgatcagta
     7381 ccaccttcac ctggccctcg gccagcagat acagcgcgtc gcctcgttcg ccttgcatca
     7441 tgatgacgct gcccttgggg aaccggcgct ccctcaggac cggggcaaat ccctccaggt
     7501 cggcctcgga aagaccggag aagagtggga ccttgcgcag gacttccacc ggcgaggaca
     7561 ttcaccaaag gtaagagggg agaagtgaga ggggggagtg aactggagaa tgcacgttgc
     7621 ccagtgccga ttgcagaagg ggccgccgag gaggtccctc tgccatgggc attgggcatc
     7681 cggcactctc cggttcacca cccccacgcc ccgggtggtt gattctcatg tccgagcagg
     7741 ctaagttact gcgttaagct cggttacgtg gtcatcgctc ctgtgcgggc cgcggccggg
     7801 ccagaaccgg gaacccgtgt gaaacccaac ctgcatccgc cctatcgcac cctcatggtg
     7861 gagtgtgcct gcggcaacaa gttcgagacc cgctcgaccg ccaccagcat ccacgtcgaa
     7921 gtgtgctctc agtgccatcc gttcttcacc ggcaagcagc gcctgatgga tacggccggc
     7981 cgggtcgatc ggttccgccg gaagtacgcg accgagccta ccaaggcctg atcatggatg
     8041 ccctgctccg ccaggctctc gagcgggcgg aggaggtggc caggcaactg gccgatccag
     8101 ccaccgcccg cgaggccggg cgcctgcaag cgctcggtcg cgagcacgcg cggcttgctc
     8161 ctatccagcg caaggccgag cgattgcttc ggttgcagga cgaattgcgg caagcgcagg
     8221 agctcgccgg cgatgccgcc gatcccgaga tgtcggcgct cgcctggctg gacatcgacc
     8281 gcctccccgg cgagatcgcg gcgctggaaa cggagctgca cgagctgctg ttgccccgcg
     8341 accccctgga agatcgcgat gcgatcatcg agctcagggc cggcacgggg ggcgacgaag
     8401 ccgcgctgtt cgccgcggat ctgttccgga tgtacacccg gttcgtcgag cgccacggcc
     8461 tcaaggtgga ggtgatggag ctgagcgagg ggaccctggg cggcgtcaag gaagtggtgg
     8521 ccgcggtccg gggtaccggc gcctacggtt tgctgcggcg ggagtccggg gtacaccggg
     8581 tccagcgggt gccagccacc gagaaccagg gccggatcca cacttccgcg gccaccgtgg
     8641 ccattctccc ggaggcggag gaagtggacg tcaagatcga accgcaggac atccgggtgg
     8701 atgtgttccg ctcgtcggga ccgggcggac agagtgtcaa caccaccgat agcgcggtcc
     8761 gcatcacgca cctgcccacc gggatcgtgg tctcacagca ggatcagaaa tctcagctgc
     8821 agaacaagat caaggccatg gaagtgcttc gggcccgcct gctcgacaag cgaatctcgg
     8881 agcaggaggc cgcccgcgcc gccgagcggc ggaccatggt cggcaccggc gaccgttcag
     8941 ccaagatccg gacctacaat tttccccaga gccgggtcac cgaccaccgc atcaaccttt
     9001 cgatccacaa tctggccgaa gtgatgaatg gtgatctgga ccagctggtc gacgccctgc
     9061 gcgtggcgag ccgcgaggaa cagtctcgtg cctgacatca gggagcagga agcagggacc
     9121 agggagcagg aagccgggac cagggagcgg gccactgcgc ttcaccaggc gatcgccgac
     9181 ctcgctgcgg caggcattcc cgagccgagg cgcgaggcgc tcctgatctg gagcgaactg
     9241 gcgggcccca ctccgggagc gaccctggtc ctgcccgacg cccgcctgag tgccgacctg
     9301 gccgtccggt ttcgccaggc ggtggcgcga cgggcggcgg gagaacccag gcagtatgtg
     9361 gtggggacgg tagggttccg acgtctcatc cttggatgcg accgccgggc cctgatccca
     9421 cgcccggaga ccgaaggcct ggtcgatctg gcgctggcgc gtggttccac cgggcgggca
     9481 ctcgatctcg gcacggggag cggctgcctg gcgctggctc tggccgatga ggcggcgtac
     9541 gacgaggtgg tcggcatcga tcggtcgcct gcggccctcg cgctggcgcg ggagaatggg
     9601 actcgcaccg ggctgtccgt ccgctgggtg ctgggagatt gggtgaagcc ggtgtcggga
     9661 gaacggttcg atgtcatcgt gaccaaccct ccctacattg cggctgggga gctccgagcc
     9721 ctccactcct cggtccgcga ctgggagccg gaaatggccc tcaatggcgg gcccgatggt
     9781 ctggcggagg ctcggcggat cctgactttg gcgcccgcca tcctgcgggc gggcggttgg
     9841 ctgttcatgg agctcgatgc cgcccgcgcg gctgtgacgg cggaagtcgc caccgcatcc
     9901 ggctggcgcg cggttcgcgt gctcgacgac ctgtaccggc gtccgcggta cctcgcggcg
     9961 caatgggagc ccgacaatgc ttgacgagaa ggcggtcgac ctcggccgga tgatcggaca
    10021 gtcgtccgag tatcaggcgc tgcgccggtc ggagcagagc ctgcgctcgg atcaggacgc
    10081 ggtcgcgcgg ctggagcgga ttcaggagct ggcccggcag gtcgatgtcg ccatctcccg
    10141 cggcgagctc cccgacgagg cgaccaccca ggcctacgag caggcggtgc gcgagctgga
    10201 gctgagcccc tcggggcaaa gctacgtggt ggcccgggcc aacttcgaca agctgatggc
    10261 gcgagtgaat caccagatca gccaggggat cgagaagggc gccaccagct ccatcatcac
    10321 gctctgatgg cgcgcggctg ctttgtcgtg ctggaaggac cggagggttc cggcaaaagc
    10381 acgctggcgc cacagctggc ggaatggctt cggaaccggc ggatcgatgt cctgctggtg
    10441 cgcgagccgg gaagcacacc ggtggccgaa gccctgcggg cggagctgct ggtcgccgac
    10501 cggcattgga cgcccgaaat ggagctgctc tactacgtga ctgcccgggc cgaccatgtg
    10561 acgcacgtca tccgccccgc tctcgaggca gggcgcctgg tgatgtccga ccggtacgag
    10621 atgtccaccc gcgcctacca gggagccgga cggggcgtgg atcgggacca tctcgaatgg
    10681 gtgaaccggg ccgcgaccgg gggcctggtt ccggacctga cgctggtgct cgccctcccg
    10741 gcggacaccg gtctggaacg gctgcgtgcc tcggggcggc gacccgaccg cctggatcgg
    10801 gagtcgctcg agtttcaccg gcgggtcgcc gcctactatc aggcagtgca gggccccggc
    10861 atccgtcacc tcgatgccac ccagccgctc gatcagcttc tcccgcttgc cgtggccgaa
    10921 ctgcgggcgg tcattcctca actggtattg gagccatgat gggacgtcgc gggttcaccc
    10981 tgatgatcct gttggctggt ggcgtctcgg ccgcgggtta cctgctgctg tcgcgacccg
    11041 cccgcgaggg ctaccagccg atccaaccca cgcgactctt cgagcaagtg ttctcccatg
    11101 tgcgtcgctt cggggtggac tcgctgcccg agtcggatct ctatcgactg gcggcgaacg
    11161 ggctgttggg ggagctggat gacgagtatg cgaccctgct gcagcagggg tccgaagccg
    11221 gccttaccga aaccgccgat gtcgggggca tgggactact gctggcggcg cgcgatggcc
    11281 ggatctcggt gctgtcggtg ctgcccggat cttcagccga gttggtcgga ctggcacccg
    11341 gcgatcagct ggtcggagtg aacgacaccc aactcgatgc cggccgtcgc gaccaggtgc
    11401 tggcggccct gtcggggccg gccggaagcc tggcgcaggt ccgagtgcgt cggccgggca
    11461 tcggaccgct cacctttccc gtcgagcgga gtcaaccgcg ccgatcactg gtgcagccgg
    11521 cgcgcaaact ggacaaccgg gtcgggtatg tggcggtgcg gctgctgggc cccggcgcgg
    11581 cccgcagcgt tcgacaaggt gttgagcagc tgttcgagga tggcgcccag gggctgatcc
    11641 tcgatctgcg aggtgcctcg cagggcgccc tggacgaagg ggtggcactg gcggatctct
    11701 tcctggatcc aggtgccaag ctgatggagc tgcggggtcg ggctccggag ccgcggcgct
    11761 ggggtgacga ccagccccag gatcgtcgaa tgtcgggctt ggcggtggtg gtcctgatcg
    11821 acagtaccac ggccgatgcg gccgagatca cggcgggggc gctccaggac aacgatcgcg
    11881 cgctgctgct ggggcagccc tcctttggcc ggggactgtc ggccgagacc tttccgctca
    11941 ccgagaagat gatcgtccgg atcagtaccg gccgctggtt caccccgacc ggccgcccaa
    12001 tccagcgtga cacggccacc agcgacaccc tcgaacagcg gcccagggtc agcacggccc
    12061 gggggcggtc ggtctacgcc ggtgggggca tcgtgcccga cagcctggtg ggacgggaca
    12121 cgctccccac gacggagcag gcatttctcc gggcggtggg ctctcagttt cccgtgtggc
    12181 ggtcggtggt gagctcggtt gctaggcttc tggtcgccgg agcggcaaac ccggagcctg
    12241 gaatcgtctc ctccgaggcc cgggcccggc tccgcgcggc gctcgactcg gccggcctgg
    12301 tggtgccgga tgacacctgg aaccacgccg ggccggcgct cgaccagcgc ctgggtgacg
    12361 agatggtccg gctggcgcgg ggagaggacg ccctgttggc gcgccggctg cggcgcgatc
    12421 cggtggtcag gcgggcgatg gggttactcc acgccgcccg atctccgatc gcgttggtca
    12481 tgggaaccgg tgaacggtga aacggtgaac agtgaacagt gaacgggcaa cagtgaacgg
    12541 gcaacagtga acggtccact ggcgttgagg gcttggggtt cgtcatcctg agcgaagcga
    12601 aggatctggc cgaggaggat tcttcgctgc gctcagaatg acgctcggca ggagtcagac
    12661 tgacgctcgg ctggaggacg tcgacgttcg ctgtttaccg cttaccgttg accgttgacc
    12721 gttgactcac tgttgactgt tgactgttga ctcctcaccg gtcgaccacc cgcaccccat
    12781 tcggtacctc gaaaacaaac tccgatcgac tgaccgtcgc gttagttcgc acccgcgaga
    12841 gggtgagggt gcggcgtaca ccgctgcgtt cgtccagctc cagccggcgc ggcaccagcg
    12901 tctggcgatc gaacgagatc accgcccggg agaacagcgg gtcgtcgctg gtggggatga
    12961 actccagcac gtcgaccgtt cggttctcga cgctgtcggc gccgagccac tcgatctgat
    13021 agcggtcggt ggtcttgtcg aggatccggg ccaggacatt gggaccataa actggatcgc
    13081 tgggaatcgg catccggatc acctgacccg gcgtcgtgct cggggtgtag agccagaggt
    13141 aggtcccgtc gaggacgatc atgtcgccct tgggatcgct gaaccgcatg gccagatgcg
    13201 cggtgcccga ttgaaccagc tcaccgcgag actcctgggt cccgatcatc cggtcctcga
    13261 tcacctggtg aaacgaagcg cggatggagc cgaagctgcg ataggtccgg ctggcccggg
    13321 ccgcgatgtc ggtggcgctc tgcccggccg cgctgcccgc gccggctgcg agcagcaaca
    13381 gcatcgcaac cagcttcacg ttcgaactcc caagccgggc gcgacccgcc gaccgactgc
    13441 ccgggcgacc ccgtgcagct cccgcatcag ggccggaaaa tcctctagga gcatgctctg
    13501 ctcgccgtcg gaatgggcca ggtcggggtc ggggtgtacc tccaccatca cgccatcggc
    13561 ccccgccgcc agcgcggccc gggccatggc cggtaccagc gaccgccggc cggttccgtg
    13621 actgggatcg gcgatgactg gcaggtggga gagctggtgc agcaggggaa tcgcggccag
    13681 gtccagcaca ttgcgggtgg atccatcgaa gccacgtacg cctcgctcac acaggatgac
    13741 gttcccgttt ccttccgcca gcaggtattc ggccgcgagc aggagctcct gcagcgtggc
    13801 cgccattccc cgcttcagca acaccggccg cccggtctgc gccacccgct tgagcaacgg
    13861 cggattggcc atgttgcgcg agccgatctg gatcacgtcg gcgacctgcg ccacctggtc
    13921 gacagtgtcc gggtcgagcg cctcggtgac gacgagcagt ccggtctctt ggcgggcccg
    13981 ctccagcagc tcgagcccgg cgggtcccag accctggaac gaccagggtg aggtccgggg
    14041 cttgaaagcg ccgccgcgaa gaaactgggc tccgctttcc gcgacccgat gagccgtctc
    14101 gagcagctgg gcctcgccct ccaccgcgca gggacccgcg atcacgatca catcatcccc
    14161 cccgaccgtc acgccgttag caaaacggat tcgggtcggc tcgggatgcc aatcgcgcga
    14221 tgcgagatga tggtggggcc cgccccagat cacttcgtcg acgccgggga gggaggtgag
    14281 tcgggcgcca tcagccggag cgatcgccgc gctgacgacg agggcctggc gtccgacggg
    14341 accctcgacc ggccgggcct cggcgccaag agaggcgagc acttcacgca gccgctccag
    14401 ctcggcggcg gtagcgccag ggtgcagaac gatcagcatg gcatcggctc aggccggggt
    14461 gtgttccccg agccgtacgc cgacgatggt ggagaccccc ggctcctgca tcgtcactcc
    14521 gtacaccgca tcggccgcct gcatggttcg cggattgtgc gtgatgacca ggaactgggt
    14581 ccggctcttg aactcgtcca gcaaggtcgt gaaccgtccc acgttggcgt cgtcgagggg
    14641 cgcgtctacc tcatccatga gacagaaggg gctcggcttg gtgaggtaga tcgcgaacag
    14701 tagagatgtg gctaccaggg tgcgctcgcc tgatgacagc agatgaatcc gctgggtccg
    14761 cttgccccgg ggcgcggcgt ggatctcgat ctcgctctcc agcggatcat cgggcagcga
    14821 aagccgcagc tcgcattcgc ccccgccgaa gagggtttga aacacctgca cgaagttcac
    14881 ctggatggcc tggaaggtct cgaggaacat ggtgcgagcg gtaccatcga tctcccggat
    14941 cgcctgcaac aacgactggc gggccgccac cagatcatcc cgctgcgtga tcaggaactc
    15001 gtaacgtttg gtttcctcgg cgtgctcctc gaccgccagc gggttcaccg ggccgatcgc
    15061 ttcgagcgag ctgacgatcc ggcccgactc ggtctccagc gcctcgagat cgaggtcgag
    15121 cagctgggcg ccttgcagca accgctccag cggcgccctc cattcatgct ccacccgttc
    15181 ccggatgctg cggcgcgagg cggacacctc ggtcagctcc agctgcagcc ggtgatgctc
    15241 ctcggtgagc agctcggcgt tcatccggag gtcgctcagg agccgctcgg tgccgaccag
    15301 cgcctcatcg gcccgggcga gggtggcttc ggcttgcgcc agggccaccc gctgggcgtg
    15361 caacgcggcc cgaccctcgg cccgttgctc ttcccactgg gacatctggg ccgacagctc
    15421 ccgggtctcg aggtcgagcc cggccagctc ctggttgagc gactggaccg cccctccggc
    15481 ctcgccgatg gtgtgggtgg cccgctccag ccgttcggcc gcggcccgga gtcgcgcgcc
    15541 caggtgggcc tcctgaacct gccactggag tcgcgcttcc cgggcccctt cctgatcgga
    15601 ctcgagcgcc gccagggcgg tccgtgcgtt gccgagctgc tcatcgagcc gggcgcggga
    15661 caactcggcc tcggtgaatc cggagtcgac ctcgcccagc cgctgctcgg cctgaccgat
    15721 acgctcctgg atccgtccca gggacagctc ggagtcgtgc agctcccgtt tgagcgtggc
    15781 caggcggcga ttggcgtcgt cccgggcgcc cgccgccagc cgctcagcct cctgggccgc
    15841 ggtccaccgc tcggccgcct cctcagtctc acgctccagt gcttccagcc gttcgcgggt
    15901 cgcgaccagc gcccgggtcg cttcacccag gacggcatcc tggcggaaca cgtcggtgga
    15961 cagctgcgcc aagtcggccc ggcggcggat cggcccggtg ggactggccg cgccgcccag
    16021 atggaccgcc ccgctgggcc gacgcagcac ccgtccggtg ccttccaaca cctcggaccc
    16081 acctaccagc gcgtcgaccc acgcagcggc cggtccttcg gcgcgcaggc gattggtgag
    16141 cgggtgagcc cccaagttgc ggagcgcggg tcccggctcc accggcaaca ggaccagcgc
    16201 tccgggctgg gcgtcggcgt gccagtcctg gatccgctgc accacgtccc aatcgtgtac
    16261 caggacggca tggaccaggt cgcctaacaa ccgctcggcc agctcggcat cctgccgttc
    16321 gctggagagg taatcgctca aggggccgag aatgccctcg ccgaagcgat gccgctcggc
    16381 caagagcgcc gcggcgcccg gggccagccc cactcgatcc cgttccagct cctccagggc
    16441 ctggcgccgg gccgacagct gggccagcga ctcttcggcc tgccgcacca cggcccgctc
    16501 tccgacttcc cgttcacggg tgccggcgag cagatgacgg gcccgttcgg cgtcggcggc
    16561 ggcggcttgg gcgtcacgag cccgaaccgc cgctacctcg gcggcttcgc gggagcgacg
    16621 ttcggcctcg cccaggtcgg cctgcagcgc ttgccggtgg gcggcggcca cctcggcccg
    16681 ctcccgcaac gaggccagct cgccatcgag cgcgccgcgc tcgccttcga gcgagcggag
    16741 actctgagcg caggccgcga gctcctgttc cagccgacgc accagctccc gctggcgagt
    16801 gaggcgctgc cgcatctcgt cttcggtggt cgatcgtccg gagagctcca gctggatctg
    16861 ctggtgctcg cgctcggcgt cgctccgctc cgacccggcg gccgcttctt ccagctgggc
    16921 ctgctgcgag cgcagttcga gcagtcgccg ttcctcgtcg gcccgctggc gccgctggct
    16981 ggcacccgag gcccgttccg ccgccacggc gatatcggcg tccagtttgg ccagggcaat
    17041 ctgggcttcc gaaagctccc gctggatgtt gccgcggtgg gcttcggccg tggcgcgctc
    17101 ccgggcccgc tgctcctgct cggaggtttt ttccgccaga tcccggcgga tgcccggcag
    17161 atcggtgctc aactgggtgt agcgggcttc catgtccgag gcctgttcgg ccagccggtc
    17221 gagcaggcgg cgcgccaggg tcagctggac agtgaacttc tcctcggtga gcttggcgtg
    17281 ccgttcggcc cggcccttct ggcgggcgag gctccggatc tgcgactgca cctcgttgag
    17341 gagatcctcc agtcgctgca ggtcggcggc ggtttcctcc agtcggcgct cggtagcgta
    17401 cttgcggtcg cgatagagcc ctatggcggc cgcttcttca aacagcgaac gccgttcgtc
    17461 ggcccggtcc gacagcagca ggtcgatcat cttggcttcg atgaccacgc cggcatcgct
    17521 gcccatgccg gtgcctcgca gcaggtcctg gatatcgcgc agccgcactg gggcattgtt
    17581 gaggagatac tcgctgtgtc ccgagcggga gaggcggcgg gtgaccacca cctcctggta
    17641 gccgatcggc agcgtgccgt cgacgttgtc gagatggagc gacacctcgg tcacgttgac
    17701 cggccgccga gcggtggagc cctgaaagat gacgtcctcc atcttcccgc cccggagcag
    17761 ccgggccgac tgctcgccca ggacccatcg gaccgcatcc gagacgttcg atttgccaca
    17821 gccgttgggt ccgacgatgg ctgtcacgcc ctcttcgaaa ttgagggtga ccgtatcagc
    17881 aaaggatttg aagccggaca gctcgaggcg ggtgagtttc atgctggatg ggaaagatag
    17941 cggaatgccc gccgggaatc agggctctcg cgatccccgc tgcaccacga agtagggccg
    18001 tcccaggcgc ctcccggctt cttccgccac tgcgcgggtg ggataggggc ccaccaccac
    18061 ccgatagctc tcctcgggcg tctcgggccg ccagacgccg gccggatgac ccgcatctcg
    18121 cagctgctcg gcgagatcgt cggcccagtc cgggttctgg gagctgctga cctggagcca
    18181 gtgttcctcg agcgttgcgc tcggagtgga atcggtgacc agcgcctgat cctgttggac
    18241 cacggcggtc tcgacggcgg ccagggcgcg gggcgcccgc tggggcggca cccagggaat
    18301 caccatccac agatccttgg ccccgcccgc cacggtagtc atccgctccg gagggacggc
    18361 agcgaggtta taggcgtcca ccgacttgcc gttatggacc accagggttg ccgcgccggc
    18421 gatgagcggc aggtcctcgc gccactcggt ctccagcgtg gcgacgtgcc gtcccgtggc
    18481 caggtcgacc acccaggccg aatcgccgct ggcaggccgg accaccatcc agcgtccgct
    18541 ggggtccgcc ctcgcctggc gcgcttcccc cggcagcgcg atcgactgga gtcgctcgcc
    18601 tgagaaccgg tcggcgaccg tcacttcatc accgaccagg gcatagaccc gatggcccga
    18661 tggactgaag aggacttggg ccggtgggcc gggcagatca atggttcgca gggtggagcc
    18721 gtcggtggtc cggaccagac ggagctggtc gccttccgag acggcgacga tctcgcccca
    18781 gaacgagggg gcgaccggtc cctcgctcac cgaagccggg ggcccggatc gctccggcga
    18841 gataagccgg actcccggcg cgctgtcggc ggaaagcgcg agggcctggc cgttgatggc
    18901 gccccagagg gccaccggcg gccggcggaa tgaggcagac aacaccgccg gcgtccggcg
    18961 ttgcaaccgg accagacgcc ccgaggaatc cacgaccaga acggacccgt cgggaccgac
    19021 ggccgcccgc cgcacgccac tcagataggt acgccaaccg cccgactcga gatcgattcc
    19081 caccaagcgg gcgttttcat ccaccgccca gacgatacgc tcgtcgagat cgtagcccag
    19141 ggcacgcgca agcgccggta ccccgccgga ggagctccaa ccccacggca gcaggctgtc
    19201 ggggcgaaag gccaacgccc gaccgccctc ggccggcagc ttgagaacgg ttgaaatgcc
    19261 ggcgagggcg gggagggcgg ggggaggctc gaccgagccg ccggtgcagg cagccagagc
    19321 cgccagcagg gcgaaaccgc tcgaccgggt ctcgcgcggg atcagaacgt gggtcccaga
    19381 ctcaacgtcc agagctgctt gacgcccggc cggttgatcg gtctggcata atccagccgc
    19441 agaataagga agccgagcag gttccctcgg atcgacgcgc cccaggcctg caccggatcg
    19501 cggacctcgc gccgtccggt actgccgctc acgtcggcga agtcgacgta ggggtcgttg
    19561 gggctgcggt cccacttgat cacgctgttg ttgtcccaga ccatcccgat gtcgtagaac
    19621 agcgcgccct cgatgccggg gagcgggatc ggcagcaccg ccagcgccgc gttgagcagc
    19681 gggaagcgga gctcgatatt ggcgatcgcc acctgggagc cgatcaggtt gttgaccgca
    19741 cagccctgag ctggatcctg cccgaagaga cactcgttcc gctggtacga gccgtaggtg
    19801 tgcccccgga tcagctcggt ggtgccgccg aagaaggtga actgttcggc atcccggccc
    19861 cgccggccga agtagaagaa ccggctggcg agacgaatcg gtccggcgat ccggtcgtac
    19921 cggcgatagt cgaacgtccc ctgggtgaat tgccaactgc ccaggctctg ggcgatctcg
    19981 atgcgggagc ggcggcccat gaaaggcccg acgtacccga acagggagtt gtcgtacacc
    20041 agcgccagcg agggcatggc gtacgagtga ttgtccaggg ggatggtctc gcggaccact
    20101 tccccggtgg ggaagccggt gcccaggtcg tacggctggg agtattgcag caggtcgtca
    20161 tccgcgttca ccagctgcaa ccccagctcc cagcggcgga accggctggt ggggaagtag
    20221 gccgcgccga acagagtccg gtaaatcagc cggcggaact gctggatgaa aatggcttcg
    20281 ccgggagtct cgccttcgat gctgccggcg gctccatagc cgtagtacgg ctgctgctcc
    20341 agacccagcg tccaggcgac gcggcgggag agattggcgt actgccccag cagggcggtc
    20401 tcctccagtc tcccgttcaa ggtggtggcg aacgcgaggc ggtggtctcc cagcatgtcg
    20461 cccagcacga tggtggcctg gccgtacagg gcccggccga aattatcgcg ggcgtatccg
    20521 atactcggct ggctcacgta ttcagggttg aacttcacct tatagctctt gcgggtgaac
    20581 tccgccgtat ccggcaggtc gaacgaagtc gagtcgagga tccgggcgat cgacaccggt
    20641 tccgggccac gcaacgagtc ggcgatcgcg cccagtgaat ccgaggcgcg gaatccttcc
    20701 cgggtccgat agagcgaccg ccccgacagc acgaagggcg gcttgggctg ctgcaatccg
    20761 cgcccgggca cggcggccgg ggcccgggac gcgagggccg gcccggcggg tgcggcttcg
    20821 ggccgcgcca caatgaaggc cggcgtcact ttgccctccc gccagggctc cttcttgagg
    20881 aggcgggggc tgctcagcga gtagacgtcg tacttaccct gctcgaaata gacgaaggcc
    20941 agccggtcgg acagcgccga ccaggagagg gcgggtgaca agggagtgat gccgctcacg
    21001 ccggtgtaga aatcggtgag ctgataggcc agtccttcac tcacctcgta gataaagatg
    21061 ttgttgaccc cgttccggtc ggagacgaag gccaggcctt gaccgtcagg cgcccactgc
    21121 gggctgacgt tccggcccac ccccatcccc tccggcaggt cgatcttccc gctggcgacg
    21181 tcatagagcc cgacccggag cggtccccag atcagccgct cgaagtcggt accgggcccg
    21241 cggtcggtga cgaacgcgat ggttttaccg tcgggcgacc aggtggggtg gagctcggcg
    21301 taccggtcgt tggtgatgcg ctcgaggttc ttcccgtcga cgcccacggt gtacaggtcc
    21361 gagatcccgc cgcccaggcc ggagaacacc agccgttgcc catcgggact gaaggccggg
    21421 gccgtgatgc cggagatggg caccttgatg cgtttgatct ctttgttgcg ccgcggatcc
    21481 acaatcacca ggtcgtcctt gccctcgcgc ttggcggcga aggcgaggta cttcccgtcg
    21541 gccgaccagc tcaccgagga gtagaggaac cgataggtct cgtagttgga gctgtaggac
    21601 gactccagga tccggcggat cggcttgccg gtgtttccgt cggccaggta caggtcaacg
    21661 aagaagaagt ccttctcgct gaaatacgcc accagcgatc catcgggcga cagcgccggg
    21721 gccaggtgcc aggtgccgtc ggagttctcc tcattgagga gcggtgtcgc gagggtgcgg
    21781 gccttcaccc gagcgccgac ctcggggagg aactgcttct ggaccgcgtc gcgccactgg
    21841 tccaccagca tctcgaagct gagcccggtg acccggcgga tggccagctc gatggagctg
    21901 ccagtggcgg acttggtgat ctggccgacc gcctcgtcac cccagcgggc tccgatgtag
    21961 gacaccagcg cgtggccgaa gcggtagggg aagatccgat agaagtccct ggcggtgggg
    22021 agcttccctt ccagcgccgc atcgcgaagc cacatcgcgg tattgggatc gaccggcccg
    22081 atcgagaggt attccgccat gccttcgccc caccacaggg gcgcgttgac ctggtagatc
    22141 ccctgcaccc cggagatccc ccgtccccgg gaccagatgt cgaactggaa ctggtgcacc
    22201 atttcgtgct gcagcacgtg ctcgacatcg tcgtacgagc cggtgagggg gaaggtattc
    22261 cggtgcagga gatagtcggt gaagcccccg gtgctctcgt cgatgtcccc gccggccagg
    22321 ttggtctgct ggaactccga atgcgaggcg tagagcagga tcggcttccg ctcgttgaac
    22381 tcgtggttca ggatgcgggc cagcttggca tagctgcgct ccgccatccg ggacacatcc
    22441 agcgccgctt cggcctcacg gtcgtagtag tggacgtcga aatgctgggt ctggataatc
    22501 ttgaagtcga acttggcgta catgaccttg ttgcggccaa agtactgtgc ggccgctgtt
    22561 ccgggcgaga gcacacccaa ggccaggccc gccacgacca tccgcgcggc gttactcata
    22621 gttgtccgga ccatcctttc tggtccccgc ccggcccgga aaacacgacg ggtgcgtcgc
    22681 tccagagccg ctcgagctga tagaaggcgc gggcctgcgg gtggaagagg tgcaccacga
    22741 aatcgacgaa gtcgatcagc acccagcgac cgcccgtgac cccttcgacg tgatgtgcgc
    22801 gaaagccact cgtttccaga cgctccagca ccgcgtcaca gatccctcgt acgtgtgcat
    22861 ccgaagtgcc actagctatg acgaagaagt cggtcgcatc gttgacacct cgtaagtcga
    22921 ttaccgagat ggaccttccc ttccggtcct cgatcgcttc caccacgaga cgaactggcc
    22981 tcgggagtgg acgcctgacc tcagccatgg acacttccgg gcagccgggt cggggtcccg
    23041 tcctccacct ggtagaatac tgcccaggcg ccgattccgg tgtgggtgcc cagcaccccg
    23101 ctggcctgcg ccacgaaaca gtctcgcggc tggaaggcgg cgaccagggc gccgcgcacc
    23161 cgctcggcca cctcgggagc gtcggcatgg accaccccga accggaccac cttgggacgg
    23221 ggagtcagcc gcaggtcgag gagctggagg attcggcgga acaccgcctc ccggccccgg
    23281 gcccggtcca ccggtcccag ccgcccgtcg ccatccaggc tgatgatggg cttcacatcc
    23341 agcatgccgg ccagccaggc ccggccccgg gacacccggc cggagcgaag caggttttcg
    23401 taggtatcga ccgtcagaaa catgcccgcc tgacgcttga tccggtccaa ctcacggacg
    23461 atctcctcgg ccggccagcc ggactccgcc agctccgccc cgcgcagcac cagcatcccc
    23521 tgacccagag agaccgtccg gctgtcgaca aaatgcactc gcgacagccc ggcaacccgg
    23581 gccgcggtct gcccggcgtt aaacgtccct gacaggacgc cggacaccag caccaccacc
    23641 acgtcctcgg
//
LOCUS       DASWKS010000587         5465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1426388, whole genome shotgun sequence.
ACCESSION   DASWKS010000587 DASWKS010000000
VERSION     DASWKS010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1426388"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1732)
                     /locus_tag="VGA78_16765"
     CDS             complement(164..1732)
                     /locus_tag="VGA78_16765"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX9895585.1"
                     /translation="MSGPANRSVTGIALVVVLAAGALGVVLAATRSPIFDLDRHAVPK
                     ELALHLTALLGLILLLPRWRWLEVAVVEWLLGIYVGWSALSALFSENHWLAFRAWGIS
                     GSALVVFLMARAARRAGYGRWVLAALAVATTVGALGGLMQAYGADWALLHGERPPGGT
                     LGNRNFLAHLSVIAVPIVGVLTLGSQRRWSWWTGIGALAALAGTIVLTRSRAAWLAAI
                     VTLGLAALAAWWVRGLGDRHRRRTVGLALLGGTLAALVLPNRLAWRTGSPYRDSLVGL
                     VNYQDGSGRGRLIQYRNTLRLVKQDPVFGTGPGNWMVQYPRVTTPGDPSFAGTDPIPT
                     NPWPSSDWMAILAERGLIGVLLLAAAGVAATLVAVRRLRDPEQGAAALGILGLLCATL
                     VTGMFDAVLLLAPPTLVVFAALGALLPDTGTVLTRELAGRRRAAAVGIPLLLTSLLVL
                     HSGGQLAAIRITEIGQQRSAMEAALRYEPGNYRLHLLLSMRGNCAQRLPHARVARRLL
                     PYHAWPKRMAATCE"
     gene            1778..2329
                     /locus_tag="VGA78_16770"
     CDS             1778..2329
                     /locus_tag="VGA78_16770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895586.1"
                     /translation="MAEAPEPGVALVLTDGPVPIVVGPLEDERTPEGMVCLGTRLEGR
                     LIGRCVVPRDVAEFLERYAILEQPVPLALAVKEEPPGLQCRLFAVVDLPAEAVAEDGD
                     EPEPWAASVPSSGYEQVIQPSEGEGEGQRVAVLLGHIVRFAKDRRHPGNLPLEAADVL
                     ATIVSGRASEVVDKVIEDLLGPA"
     gene            2392..3282
                     /locus_tag="VGA78_16775"
     CDS             2392..3282
                     /locus_tag="VGA78_16775"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX9895587.1"
                     /translation="MTTQSLPAVTPIEARGYVHPEVLVSTDWVAAHLDDPRVRIVESD
                     EDLLLYDTGHVPGAVKIDWIEDLNDPIIRDYLDHTRLQKLLRGKGISRDTLVVFYGDR
                     NNWWACYAFWVLRLFGLERLRIMDGGRSLWEKEGRPLVTAKATYPPGDLSVGPRNDRV
                     IRAFRDEVQAHVRSRAALVDVRSPEEFRGERLHMPEYPNEGATRGGHIPGARSIPWGR
                     AINPETHTFRPAGELKTLYQEENGLRPEGDTIVYCRIGERSAHTWFVLTYLLGYSQVR
                     NYDGSWTEWGNSVGMPIERP"
     gene            3419..4660
                     /gene="icd"
                     /locus_tag="VGA78_16780"
     CDS             3419..4660
                     /gene="icd"
                     /locus_tag="VGA78_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEX9895588.1"
                     /translation="MTISYQTLDPPATGDLITKAAGVLRVPDNPIIPFIEGDGIGPDI
                     WRASQRVFDAAVAKAYGGERRVVWFEVLAGEKAKNTVDSWLPDDTLRAIRHHLVAIKG
                     PLTTPVGGGIRSLNVALRQQLDLYACVRPIRYFQGVPSPVRHPELVNMVIFRENTEDI
                     YAGIEWQAGTAEAHAVIAFLQQMGVKTIRFPDTSAIGIKPVSEEGTKRLVRSAIDYAQ
                     AQGRTSVTLVHKGNIMKFTEGGFRDWGYELAKTDYGATEIDGGPWCRLPGGLVVKDVI
                     ADAFLQQILTRPAEYDVIATLNLNGDYISDALAAQVGGIGIAPGANINYVTGHAVFEA
                     THGTAPKYANQDKVNPGSVILSGEMMFRYLGWNEAADLIVAALARTIASKIVTYDLAR
                     LMEGAREVKTSEFASAMIANL"
     gene            complement(4777..>5465)
                     /locus_tag="VGA78_16785"
     CDS             complement(4777..>5465)
                     /locus_tag="VGA78_16785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895589.1"
                     /translation="ETVFVAQDLSAPPGPAAPEQEAARTQSDERRNTAPPAAPSTTQP
                     PPDEEPRLGQFRSDRGKDAPAPRDSLAGASPGRRELAVRSALDEGAVAPSNVARKTGA
                     AERDRSSLDTLEKKQSLNEAAGKALARTPPRFALEELVVTSSAASIRFASISFFDAVA
                     RLGGQIRLMEGMVPVRLEARGTAVRVVYPLEQGELVLDQRREADSLVVVLIAPTLGAD
                     SLAKLKARIR"
BASE COUNT          933 a         1887 c         1761 g          884 t
ORIGIN      
        1 ccctgttccc tgttccctgc tccctggtcc ctgttccctg ttccctgctc cctgttccct
       61 gttccctgtt ccctgctccc tgttccctgt tccctgttcc ctgctccctg ctccctgctc
      121 cctgctccct gctccctgct ccctcctccc tgctccctgc tccctattcg caagtagccg
      181 ccatccgttt gggccaggcg tgatacggaa gcagccgacg agcgacccgg gcgtggggca
      241 gccgctgggc gcagttgcct cgcatcgaca gcagcagatg gagccggtag ttgcccggtt
      301 cgtagcgcag cgcggcttcc atcgcggatc gctgctgtcc gatctcagtg atgcgaatcg
      361 ccgccagctg tccgccgctg tggagcacca ggagcgaggt cagcaagagc ggtatcccga
      421 ccgccgccgc gcggcggcgg ccggccagct cccgagtcaa gaccgtgccg gtgtcgggca
      481 gcagcgcgcc cagcgccgcg aacaccacca gcgtcggcgg ggccaggagc aggaccgcat
      541 cgaacatccc cgtcaccagg gtggcgcaaa gcaggcccag aatccccaac gccgcggcgc
      601 cctgttccgg gtcgcgcaga cgtcgcaccg ccaccagcgt ggccgccact ccggcagcgg
      661 ccagcaatag cacgccgatc aggcctcgct cggccaggat cgccatccag tcgctgctgg
      721 gccagggatt ggtcggaatc ggatcggtgc ccgcgaagga cggatcgccc ggagtggtca
      781 cccggggata ctgaaccatc caattgcccg gcccggtccc gaacaccgga tcctgcttca
      841 ccagccgcag cgtgttgcga tactgaatca gccggccccg ccccgaaccg tcctgatagt
      901 tcaccagccc gaccagagaa tcgcgatagg gcgagccggt cctccacgcc aggcggttag
      961 gcagcaccag ggccgccagg gttccgccca gaagagccag gcccaccgtc cgccgtcggt
     1021 ggcggtcgcc caggccgcgg acccaccagg cggccagggc ggccagcccc agcgtgacga
     1081 tcgcggccag ccaggcagcc cgggaacggg tgagcacgat cgtgccggcg agggcggcca
     1141 gcgccccgat tccggtccac cacgaccagc gccgttggga cccgagcgtg aggaccccga
     1201 caatgggaac cgcgatgacc gagagatgcg ccaggaaatt gcggttgccg agcgtgccgc
     1261 cgggcggacg ttcgccgtgc aacagggccc agtcggcccc gtaggcctgc atgagacctc
     1321 cgagggcacc cacggtcgta gccactgcca gcgcggccag cacccatcgc ccatacccgg
     1381 cccggcgcgc cgcccgggcc atgagaaaaa ccaccagggc cgagcccgag atgccccagg
     1441 cccggaacgc cagccagtgg ttttcgctga agagcgcgct gagagcactc caccccacat
     1501 agattcccag cagccactcc accactgcca cctccagcca gcgccatcgg ggcagcagca
     1561 ggatcaggcc cagcagggcc gtgagatgca gcgccagctc tttcggcacc gcatgtcgat
     1621 ccagatcgaa gatgggtgag cgggtggcgg ccagcacgac gcccaacgct cccgccgcaa
     1681 gcaccacgac gagcgcgatg ccggtgaccg accgatttgc tgggcctgac attggggcgg
     1741 agtctaactt tgttgctgtc atgaggggag cagtcgcgtg gccgaagcgc cggaaccggg
     1801 agtggcgctg gtcctgaccg atggaccggt gccgatcgtg gtgggcccgc tcgaggacga
     1861 gcggaccccc gagggcatgg tctgcctcgg cacccggctc gagggccggc tcatcgggcg
     1921 gtgcgtcgtg ccccgcgatg tggccgaatt cctggagcgc tacgccatcc tcgagcagcc
     1981 ggtgccgctg gcgctggcgg tgaaggaaga acctcccggg ctgcagtgcc gcctcttcgc
     2041 cgtggtcgac ctcccggccg aagcggtcgc ggaggacggc gacgaaccgg aaccctgggc
     2101 cgccagcgtg ccctcatccg gctacgagca ggtgatccaa cccagtgagg gtgaaggaga
     2161 aggccagcgg gtggcggtcc tcctggggca tatcgttcgt ttcgccaagg accgacgtca
     2221 tcctggcaat ctcccgctcg aggccgccga cgtgcttgcc accatcgtgt ccggccgcgc
     2281 ctccgaggtg gtcgacaagg tgatcgagga cctgctcggc cctgcttgac atcccgagcg
     2341 agtcgctcgt aattgcgatt cccggtgcct accgggaggg aggatgtcat catgaccact
     2401 cagagtctgc ccgccgtcac gcccatcgag gcccggggct acgtccatcc ggaagtcctc
     2461 gtgagtaccg actgggtggc ggcccatctg gacgatcccc gggtccggat cgtcgaatcc
     2521 gatgaagatc tgctgctgta cgacaccgga catgtcccgg gcgcggtcaa gatcgactgg
     2581 atcgaagatc tgaacgatcc catcatccgc gactacctcg atcacacccg gttgcagaaa
     2641 ctgctgcgcg gcaagggaat cagtcgcgat accctcgtgg tgttctacgg cgaccggaac
     2701 aactggtggg cctgttacgc cttctgggtg ctcagactct tcggcctgga acggctccgc
     2761 atcatggatg gcggccggtc tctctgggaa aaagagggcc ggcccctggt gaccgccaag
     2821 gccacctacc cgcccggaga cctttccgtg ggtccccgca acgatcgcgt gatccgcgcc
     2881 ttccgggacg aagtgcaggc ccacgtcagg agccgggcag cgctggttga cgtccggtca
     2941 ccggaggagt tccgcggcga acggcttcac atgccggaat accccaacga gggcgccacc
     3001 cgcggcggac atatccccgg ggcccgcagc attccctggg gccgggcgat caatcccgag
     3061 acccatacct tccgcccggc cggcgagctc aagacgctgt accaggaaga aaacggcctg
     3121 cggcctgagg gtgacacgat cgtctattgc cggatcggcg agcgctcggc ccatacctgg
     3181 ttcgttctga cgtacctgct cggctattcc caggtgcgca actacgacgg ttcctggacc
     3241 gaatggggaa actcggtggg catgccgatt gaacgaccgt aacctgtcgc ggtcgaaggc
     3301 ggtcgaaggc ggtcgaaggc agtcgaaggc agtcgacggt gtgggatggg tttcaaaccc
     3361 ggagcccatt ttcgaccgtc ttcgacagtc ttcgaccgcc ttcgactagt tttaaagaat
     3421 gaccatctcc taccagaccc tggatccgcc ggccaccggc gacctcatca ccaaggcagc
     3481 cggcgtcctg cgggttcccg ataaccccat catcccgttc atcgagggcg atggcatcgg
     3541 ccccgatatc tggcgggcct cgcagcgggt gttcgacgcc gcggtggcca aggcgtatgg
     3601 cggcgagcgg cgggtcgtct ggttcgaggt gctggcgggc gaaaaggcca agaacaccgt
     3661 ggacagctgg ttgcccgacg acacgttgcg ggccatccgg caccatctgg tcgcgatcaa
     3721 ggggccgttg accacgccgg tgggcggcgg gatccggtcg ctgaacgtgg cgttgcggca
     3781 gcagctcgac ctctatgcct gcgtccgtcc gattcgctac ttccagggtg tcccttcgcc
     3841 ggtgcgtcac cccgagctgg tgaacatggt gatcttccgc gagaacaccg aggacattta
     3901 cgccggcatc gagtggcagg cgggtaccgc ggaggcccac gcggtcatcg cgttcctgca
     3961 gcagatgggc gttaagacca tccggttccc ggataccagc gccatcggga tcaagccggt
     4021 gtcggaagag gggaccaaac ggttggttcg ctccgccatc gactatgccc aggcccaggg
     4081 ccgcaccagc gtgaccctgg tccacaaggg caacatcatg aagttcaccg aaggcggctt
     4141 ccgggattgg ggctacgagc tcgccaagac cgactacggg gccaccgaga tcgacggtgg
     4201 cccctggtgt cgcttgcccg gcgggctggt cgtcaaggac gtcatcgccg atgctttcct
     4261 gcagcagatc ctgacccggc cggccgagta tgacgtcatc gccactctca acctgaacgg
     4321 cgactacatc tccgatgcgc tggccgcgca agtgggcgga atcggtatcg cgccgggcgc
     4381 caacatcaac tacgtcacgg gccatgccgt cttcgaggcc acccacggca ccgcgcccaa
     4441 gtacgccaac caggataagg tgaacccggg gtcggtgatt ctctcgggcg agatgatgtt
     4501 ccgctatctg ggatggaacg aggccgctga tctcattgtc gccgcgctgg cccggaccat
     4561 cgccagcaag atcgtcacct acgacctcgc ccgattgatg gaaggcgccc gggaagtgaa
     4621 gaccagcgag ttcgccagcg cgatgatcgc aaacctctga agccggtgaa cggtgaacag
     4681 tcagcggtga acgtcgatcc caccgttcac tgttcactgt tcaccgttca ccgttcaccg
     4741 ttcaccgttc actgttcacc gttcactgtt caccgtttac cggattctgg ccttgagttt
     4801 cgccagcgaa tcggccccga gggtcggggc gatcagcact acgacgagac tgtcggcttc
     4861 ccggcgttga tccaagacca gctccccctg ttccaacggg tagaccacac gcaccgccgt
     4921 cccgcgggcc tccaggcgaa ccggcaccat tccttccatc aggcggattt gtccacccag
     4981 ccgcgcgacc gcatcgaaga acgatattga tgcgaaccgg attgatgcgg ccgacgaagt
     5041 gacgaccagc tcttccagcg cgaaacgcgg gggggtgcgg gccagcgcct tgccggccgc
     5101 ttcattgaga ctctgcttct tctcgagcgt atccaacgag gagcggtctc gctcggccgc
     5161 accggtctta cgggccacgt tggacggagc gaccgcgcct tcgtcgaggg cggagcgcac
     5221 cgccaactcc cgccgccccg ggctggctcc ggccagtgaa tcgcgcggcg caggggcgtc
     5281 cttcccgcgg tccgaacgga actggccgag ccgcggttcc tcatccggcg ggggttgagt
     5341 cgtggatggt gccgccgggg gagccgtatt ccgtcgctca tcggattggg ttcgagcggc
     5401 ttcctgctct ggggccgccg ggccgggcgg agcggaaagg tcctgcgcga cgaacaccgt
     5461 ttccg
//
LOCUS       DASWKS010000588         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1068971, whole genome shotgun sequence.
ACCESSION   DASWKS010000588 DASWKS010000000
VERSION     DASWKS010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068971"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(443..1153)
                     /locus_tag="VGA78_16790"
     CDS             complement(443..1153)
                     /locus_tag="VGA78_16790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895590.1"
                     /translation="MYHPHADEVRQQQAGLSGALLVLDDPAAFDPTRDIVLLITAPRR
                     NADDATAVLLNGTLTPAPLELARGERYRFRLVNVHISRPSMIARLLRDGLPVTWLAVA
                     KDGMDLPAERTKTGPAVQQMGNGETYDFVFTPREAGELRFLVTSGAGVPLVSMPVRVR
                     WRRLGLVQVESARGGPIQFLEGLLHGLIHEFAQRPAPLVATPEERFRRPADFLDRLPG
                     HHQRFQHDQVVLVLIDCL"
     gene            1417..>1665
                     /locus_tag="VGA78_16795"
     CDS             1417..>1665
                     /locus_tag="VGA78_16795"
                     /inference="COORDINATES: protein motif:HMM:NF024886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HEX9895591.1"
                     /translation="MRLRHFSPRTEEAYSGWVRRYVRFHRLRHPADLGEAEVKAFLTH
                     LAVDRQLAPSTLAQALAALLFLYREVVGRPLAGVGPVPR"
BASE COUNT          263 a          547 c          579 g          276 t
ORIGIN      
        1 aggtcgtgag ttcgaatctc gccgggccca tgaatcaccg aagaacgagg gcgctctcgc
       61 agctgcaaga gcgcccttgg tcattcccgc ccttccctgc ccggttggtc cgatgatccc
      121 cctgcgcccg tcccctggca cttgcttcgc gctggcggcc attgccgggc tcgggtgggg
      181 agacgccggg ccggtcgcgg cccaggtaca cgggagcgag gcctggatct gcttctatgt
      241 ccgtccggcg gcctcggacg acgagagcac cgcggcgatc gtcaccaatc gcctccgacg
      301 caggcttcag agcatgaagc tgcactgccc tggggagctc acgcccgagg gaaatgcact
      361 tgggccgggt tgggcggcgt actgggtagc ctttcactgg gcttcggcgt cagttcacca
      421 cctgcaccag ctggcggtac actcacaggc agtcgatgag gaccagtacg acttgatcgt
      481 gctgaaaacg ctggtggtga cccggaagtc ggtcgaggaa atccgcgggg cgccggaacc
      541 gttcctctgg agtcgcaacc agcggcgcgg gacgctgggc gaattcgtgg atcaggccgt
      601 gaagcaagcc ctccaggaat tgtatcgggc ccccacgggc agactctacc tgcaccaacc
      661 ctagtcgtcg ccacctcact cggaccggca tcgagaccag cggcaccccg gctccggagg
      721 tgaccaggaa gcggagctcg cccgcttcgc ggggtgtgaa cacgaagtcg taggtctccc
      781 cgttgcccat ctgctgcacc gccggtccgg tcttcgtgcg ctccgccggg agatccatcc
      841 cgtccttcgc gacggcaagc caagtcaccg gtaagccgtc acgcagcagc cgggcgatca
      901 tgctgggccg ggagatgtgc acgttgacca ggcggaatcg gtagcgttcg ccccgggcga
      961 gctcgagcgg agcgggcgtc aaggtgccgt tgaggagaac cgccgtcgca tcgtccgcgt
     1021 tgcgccgcgg cgcggtaatg aggagcacga tgtcccgcgt cgggtcgaat gccgccggat
     1081 catccagcac caggagcgcg ccgctcaagc cggcctgctg ctggcgcacc tcgtcggcat
     1141 gcgggtggta catgaaagtc cccgagcgtg gcggggtgaa ccgggccggg gccacttaga
     1201 gcatgaaaac cggggtttgc cgggagaaac ggacaccgaa acggcccccg gatcggcggc
     1261 ttccgtctcc cgacgcgcac cctagctccg atgccccaac gggaagtgcc cgacggaaca
     1321 gcggacacgc ccgagcgggc gtgtccgacc agcactcggc gatgatcggg tccgggtcgc
     1381 gatattttga tcccagtctg acgcggttga ggcgctatgc gcctccggca tttctcgccg
     1441 cgtaccgagg aggcctattc cggctgggtc aggcggtatg tccggtttca ccggctgcgg
     1501 catcctgctg acctgggtga ggccgaggtc aaagcgttcc tgacgcacct ggcggtcgac
     1561 cgtcagttgg cgccgtcgac cctggcccag gcgttggcgg cgctgctgtt tctctatcgg
     1621 gaggtggtcg ggcggccgtt ggccggggtg gggccggtgc cgcgg
//
LOCUS       DASWKS010000589         1676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1070145, whole genome shotgun sequence.
ACCESSION   DASWKS010000589 DASWKS010000000
VERSION     DASWKS010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070145"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..844)
                     /locus_tag="VGA78_16800"
     CDS             complement(80..844)
                     /locus_tag="VGA78_16800"
                     /inference="COORDINATES: protein motif:HMM:NF015962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HEX9895592.1"
                     /translation="MPIDVAFTPADLAGLGVAGRTVFMIDILRASTTICAALVNGARS
                     CIPVGSIEEAMRLAETLERREVLLTGERNGVRIAGFDLGNSPHEMIETVVRGKTLVMT
                     TTNGTEALLATGGAARVYVAAGVNLALAGALASEVLAEADDLLVVCAGRAGDFSLDDA
                     YAAGRLLQAALGRRRPRQGLNDAAQVCLDLARRYGDNWLRPLMAARSGRELVALGFRE
                     DVEMAAQEDHFPVLPQLTDRRITPAVVGAPYPPALP"
     gene            complement(834..>1676)
                     /locus_tag="VGA78_16805"
     CDS             complement(834..>1676)
                     /locus_tag="VGA78_16805"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="an AccC homodimer forms the biotin carboxylase
                     subunit of the acetyl CoA carboxylase, an enzyme that
                     catalyzes the formation of malonyl-CoA, which in turn
                     controls the rate of fatty acid metabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEX9895593.1"
                     /translation="FGQLFSLAQNEALSAFGNGDVYVEKYLARPRHVEIQILGDSHGR
                     VVHLGERDCSVQRRHQKLIEESPSPALDDELRARMGESAVRLASAIGYVGAGTIEFLL
                     DRDGRFYFMEMNTRIQVEHPVTEMVTGFDLVKEQIRVAAGEPMSIPNGDFSRLRGHAM
                     ECRVNAEAPYRNFQPSPGLITAYHPPGGPGVRVDTHLYAGYTVPPHYDSLVAKVIVHG
                     RDRTEALARMGQALDSFILEGITTTIPFLARLIRTPAFVSGDIDTKFLEGQPQLLRPP
                     EHAD"
BASE COUNT          282 a          573 c          564 g          257 t
ORIGIN      
        1 ccgggaatca gcgacagcgc ggcgaacagg cccaggacca gcgcggtcac cgcgccgaag
       61 cggcggcggt cctggggggt catggaaggg cgggcgggta gggagcgccg acgaccgccg
      121 gggtgatgcg gcggtcggtc agctgcggca acaccggaaa gtgatcttcc tgcgctgcca
      181 tctcgacatc ctcccgaaag cccagcgcca ccagctcgcg accggagcgg gcggccatca
      241 ggggacgaag ccagttgtcg ccgtagcgtc gcgccagatc gaggcacacc tgggccgcat
      301 cgttcagtcc ctggcggggc cgccgccgcc ccaacgctgc ttgcagcaga cggccggcgg
      361 cgtaggcatc atcgagcgag aagtcgccgg cccggccggc acagaccacc agcaggtcgt
      421 ccgcttcggc cagcacctcg ctcgccagcg cgccggccag ggcgaggttc acgcccgccg
      481 cgacgtagac ccgggcagcg ccgccggtcg ccagcaacgc ttcggtgccg ttggtcgtgg
      541 tcatcaccag ggtctttcct cgaaccaccg tttcgatcat ttcgtggggg ctgttgccca
      601 ggtcgaatcc cgcgatccgg accccgttgc gctcacccgt cagcagtact tcgcgccgct
      661 ccagcgtctc ggccagccgc atcgcttctt cgatggatcc aaccggaatg cagctgcgcg
      721 ccccgttgac cagcgcggcg cagatggtgg tgctggcccg taatatgtcg atcatgaaca
      781 ccgtgcgccc ggccacgccc agaccggcca gatcggccgg ggtaaaggcg acatcaatcg
      841 gcatgctcgg gggggcggag taattgcggt tgcccttcca ggaatttggt atcgatgtcg
      901 ccggaaacga aagccggagt gcggatcaag cgggccagaa acggaatcgt ggtggtgata
      961 ccctcgagga tgaagctgtc gagcgcctgc cccatccggg ccagggcctc ggtgcgatcg
     1021 cgaccgtgca cgatgacctt ggccaccaac gaatcgtagt ggggcgggac ggtgtagccg
     1081 gcgtagaggt gggtgtcgac ccgcaccccc ggcccccccg gcgggtgata cgccgtgatc
     1141 agcccgggac tgggctggaa gttccggtag ggcgcttccg cgttcactcg gcactccatg
     1201 gcatgacccc gcagccgcga aaaatctccg ttggggatgg acatcggctc acccgccgcc
     1261 acccggatct gctccttcac caggtcgaag ccggtcacca tttcggtgac cggatgctcc
     1321 acctggatcc gggtgttcat ctccatgaaa tagaagcggc cgtcgcggtc cagcaggaac
     1381 tcgatggtcc cggcgcccac gtagccgatg gccgacgcga gccggaccgc cgactcaccc
     1441 atgcgggccc ggagttcgtc gtccagggcg gggctgggac tctcctcgat cagcttctgg
     1501 tgccggcgct ggaccgaaca gtcgcgttca cccaggtgaa ccacccggcc gtggctgtcg
     1561 cccagaatct ggatctcgac atggcgcggc cgggccaggt acttctccac gtacacatcg
     1621 ccgttgccga aggccgacag agcctcgttc tgggccaggc tgaacagctg gccgaa
//
LOCUS       DASWKS010000590         5096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2194662, whole genome shotgun sequence.
ACCESSION   DASWKS010000590 DASWKS010000000
VERSION     DASWKS010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2194662"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VGA78_16810"
     CDS             complement(<1..459)
                     /locus_tag="VGA78_16810"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HEX9895594.1"
                     /translation="MIITISRQLGAGGAEVARQVAKRLGWSLVDNQLIDEVAARAGVA
                     PEEVAEHDETAPGFIERLARTLASSMPEFVAPEGGTLPDTTEERLVKVTEKVVADLAS
                     QGRVVLVGRAAPAVLATHPQALHVKVVAPREYRIARVLERNGVEMKQAERM"
     gene            complement(456..1724)
                     /locus_tag="VGA78_16815"
     CDS             complement(456..1724)
                     /locus_tag="VGA78_16815"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9895595.1"
                     /translation="MPPLPFAALRHRNFRLFIFGQFVSLVGMWMQSAALGWLVLTLTN
                     SAFAVGLVSAMGALPVLLFTLQGGALADRVNRHRVLTLLRVGMGLEAVALAILVLSGH
                     ASLSWIVVLALFSGLLSAFEIPIRQNFLMDLVGRDDLMNAIAFNSMAFNLSRVVGPAL
                     AGGLTALLGPAACFIINAVAALAVVGSLLRIRPDPALLVPHRQPPPLRDALVYLLAPG
                     WPRTLVTLTAIYTIFGVSFLAVLPVYARDVLHTGANGYGWLISAFGMGAAGGALLLAA
                     RGAQFRRGEFAVRGGITIGSVLLVAALLPFYPVAFLGLILGGMASATTAIVTNTLLQT
                     EAPDHLRGRVIGFYSFIVVGLAPFGSLQAGWLGQRLGVRVGAAMGGIICLGCALLLLS
                     RVKGLVPGPAADRRQPDPEQPYRWGERRQA"
     gene            complement(1780..3138)
                     /locus_tag="VGA78_16820"
     CDS             complement(1780..3138)
                     /locus_tag="VGA78_16820"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9895596.1"
                     /translation="MTLTRRQMLMSLTAGLGLGTSRCTAGNRFEAGTARQSKALRQPN
                     GEVDWHAVRELFPLAPDWIHLASFFLVSHPKPVAEAIEHFRRKIDADPAWIEQAAFSE
                     SEGRPFAAIKSSLAGYIGGAPEEICFAPNTTGALALAYHGLQIRADQEILTTEHDHYS
                     HHESIRYAAARSGCGVRYLALYDRPAHAAAAEIIGRLERAISPRTRAVGVTWVHSSTG
                     VKLPITAMAEVVARANRGRASADRCLLIVDGVHGFANQDVDVARLGCDFFAAGTHKWL
                     FAPRGTGFLWGRSELWPELRPTIPTFDPDAPQTWLAWMERQGLPPTRASFVSPGGFIA
                     FEYAFAIPAAVELHRTIGRDRIAARIRELNGAFREAVAALPGITLHTPRDPELSGGIT
                     CFEVAGLKADEVAHRLAAKRIRTNSSPYRTSYPRVAAGIMNFPEDLDAAVREIRALVQ
                     PA"
     gene            3221..4825
                     /locus_tag="VGA78_16825"
     CDS             3221..4825
                     /locus_tag="VGA78_16825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895597.1"
                     /translation="MRRIVMTVIGLSLAAGCRPDPGPSTGAVPLYDNLGRFSVPISTE
                     NARAQQYFDQGMRLTYGFNHAEAIRAFQEAARLDSRCAICHWGIALAYGPNINWPMDS
                     ASGALAWTALKEAERLAAGANPREQALIEALSVRYAEVPPANRAGLDSAYATAMAGVV
                     VKFPDDLEAATLHAEALMDLRPWAYWEKDGTPAPQTERLVSQLEKVIAADSTHPGACH
                     YFIHAVEAVAPARALPCAERLAELMPGAGHLVHMPAHIYVRVGRYADAIEHNQHATHV
                     DSVYAAAERPSMVYAGLYIPHNHHFLGFAALLAGQSAAAIESARLTVAKAPVAALQAL
                     PEFQPMAAFEHIVLLKFGRWEDVLALPAPPTDLPVAWAVAMYGRGTALAATGKAEAAA
                     AHSDSIAAVGTRLPDGIARSIVEIAQHSLAGELAARRKQWRVAETHFRAAMAIEDQLP
                     YMEPPWWIEPVRHALGAALLSGGRARQAETVYREDLQRFPANGWALYGLWQSLRAQRS
                     PDATQAEADFKQAWSAADVQLSTSHP"
     gene            4832..>5096
                     /locus_tag="VGA78_16830"
     CDS             4832..>5096
                     /locus_tag="VGA78_16830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895598.1"
                     /translation="MYRSTMPFHSYSKFIPELADSVNLQDLIERLGDFLLQSGFASQG
                     MFSWEGEESAGDNRSLEALKQAILQALMESGQLTPEMLRYLRGE"
BASE COUNT          879 a         1702 c         1752 g          763 t
ORIGIN      
        1 catcctctcg gcctgcttca tttccacccc attacgctcc agcacccggg cgatccggta
       61 ctcccgcggg gccaccactt tgacgtggag cgcctgggga tgggtggcca gcacagcggg
      121 agcggctcgt cctaccagca ccacgcgtcc ctgcgacgcc agatccgcca ccactttctc
      181 ggtcactttt accagccgtt cttcggtggt atcgggaagg gtaccacctt caggggcgac
      241 gaattcgggc atggagctgg cgagcgtgcg ggccagtcgt tcgatgaaac cgggggcggt
      301 ctcatcgtgc tcggctacct cttcgggagc cactccggcg cgagccgcaa cctcgtcgat
      361 cagctggttg tcgaccaggg accaccccag ccgcttcgcg acctgtcgtg ccacttcggc
      421 tccgccggcg cccaactgtc gggaaatagt gatgatcatg cctgtcgcct ttcgccccag
      481 cgatagggtt gttcggggtc gggttgccga cgatccgcgg cggggcccgg gaccagaccc
      541 ttgacccggg agaggagcaa gagggcgcag cccaggcaga tgatcccgcc catcgccgcg
      601 ccgactcgga cgccgagccg ttgccccagc cagccggctt gaagcgagcc gaacggagcc
      661 agccccacca cgatgaacga atagaatccg atgacccggc cccgcaggtg atcgggcgcc
      721 tcggtctgca gcagagtatt ggtcacgatg gctgtggtgg ccgacgccat gccacccagg
      781 atcagtccca ggaaggccac cgggtagaag ggcagcagcg ccgccaccaa caggaccgat
      841 ccaatggtga tcccgccccg gacggcgaac tcgccgcggc ggaactgggc ccctcgggct
      901 gccagcagca gggccccacc cgcggccccc atcccgaagg ccgagatgag ccagccgtag
      961 ccgttcgccc cagtgtggag cacgtcacgg gcgtagaccg gcaacaccgc caggaacgac
     1021 accccgaaaa tcgtgtagat cgcggtgagc gtcaccaggg tgcggggcca gcccggcgcc
     1081 agcaggtaga ccagggcgtc gcgcaacggt ggcggctggc gatggggcac cagcaacgcg
     1141 ggatcgggcc ggatgcgaag caggctcccc acgacggcga gcgcggccac cgcgttaatg
     1201 atgaaacagg cggccgggcc aagcagggcg gtgagtccgc cggccagcgc cgggcccacc
     1261 acccgcgaca ggttgaacgc catcgagttg aaggcgatgg cattcatgag atcgtcgcgg
     1321 ccgaccaggt ccatcaggaa gttctggcgg atggggatct cgaacgcgct cagcaagccg
     1381 ctgaacaagg ccaggacgac gatccaggac aggctggcat gaccactcag caccagaatc
     1441 gccagggcga cggcttccaa ccccattccg acccgcagga gggtgagcac ccggtggcgg
     1501 ttgacccggt ccgccagggc tccgccctgg agcgtgaaga gcagcaccgg caaggcaccc
     1561 atcgcactca ccaggcccac cgcgaaggcg gaattggtga gggtgagcac cagccagccc
     1621 agcgccgcgc tctgcatcca catccccacc agagacacga actgaccgaa gatgaagagc
     1681 cggaagttcc ggtgccggag ggccgcgaat gggaggggag gcacgggccg gaatctatcg
     1741 ccgttggtca gtcggtcggt cagccgggcg ggcgggcggt caggccggct ggaccagggc
     1801 tcggatctcg cggactgcgg cgtcgaggtc ctccgggaag ttcatgatcc cagcggccac
     1861 ccgcggatag gaggttcggt agggtgagct gttggtccgg atccgcttgg ccgccaggcg
     1921 atgggccacc tcgtccgcct tgaggcccgc cacctcgaaa caggtgatgc cgccggagag
     1981 ctccggatcg cgaggcgtgt gcaaggtgat tccgggaagc gccgccactg cttcgcggaa
     2041 ggcgccgttc agctcccgaa tgcgcgccgc gatccgatcc cgcccaatgg tccggtgcag
     2101 ctcgacggcc gctggaatgg cgaaagcgta ctcgaaggct atgaacccgc cgggggagac
     2161 gaacgaggcc cgggtcggtg gaaggccctg gcgctccatc caggcgagcc aggtttgggg
     2221 agcgtccggg tcgaaggtcg gaatggtcgg acggagctcg ggccagagtt cgctcctgcc
     2281 ccagagaaac ccggtgcccc tcggcgcgaa gagccacttg tgggtgccgg ccgcgaagaa
     2341 atcgcagccc aatcgggcga cgtccacatc ctggttggca aacccgtgca caccatcgac
     2401 gatcagcagg cagcgatcgg cggaggcccg accgcgattg gcgcgagcca cgacctccgc
     2461 catcgcggta atcgggagct tcaccccggt cgaggagtga acccaggtca cgcccaccgc
     2521 cctggtcctg gggctgatgg cacgctcgag ccggccgatg atctccgcgg ccgcggcgtg
     2581 ggccggccgg tcgtagagcg cgaggtaccg caccccgcag ccggaccggg ccgcagcgta
     2641 acggatggat tcgtggtgag aataatgatc gtgctccgtc gtcaggatct cctggtcggc
     2701 ccggatctgg agcccatgat aggccagcgc gagcgctccg gtggtgttgg gcgcgaaaca
     2761 gatctcctcc ggcgcgccgc cgatgtaccc ggcgagcgac gacttgatgg ccgcaaacgg
     2821 ccggccctcg gattcgctga acgcggcctg ctcgatccag gccggatcag cgtcgatctt
     2881 tctccgaaag tgctcgatgg cctcggccac cggcttcgga tgggagacca ggaagaagct
     2941 ggccaggtga atccaatccg gtgccaatgg aaacaactcc cgcaccgcgt gccagtcgac
     3001 ctcgccgttc ggctgacgaa gtgctttcga ttggcgggca gtcccggcct cgaaccggtt
     3061 ccctgctgtg caccggctgg tgcccagccc gaggccggca gtcagcgaca tgagcatctg
     3121 gcgacgggtg agggtcatgg tcgtctcccg tggtattttt tcgtagtcta cgatacagca
     3181 gcctgaatcg ctcgggacca tccgacagca ggaggacaat atgcggcgca tcgtgatgac
     3241 ggtcataggg ttgtctctgg ctgccggttg ccggccggac ccggggccca gcaccggcgc
     3301 ggttccactg tacgacaacc tgggccggtt cagcgttccc atctctaccg agaacgcccg
     3361 ggcacagcag tacttcgacc agggtatgcg gctcacctac gggttcaacc acgcggaggc
     3421 gatccgagcc ttccaggagg ccgcccgact cgactcgcgc tgcgcgatct gccattgggg
     3481 gatcgcgctg gcctacggac ccaacattaa ttggcccatg gattccgcca gcggggctct
     3541 ggcctggacc gcgctcaagg aagcggagcg gctcgcagcc ggagccaacc cgcgggagca
     3601 ggcgctgatc gaggccctga gcgtgcgcta cgcggaggtg ccccccgcca atcgtgccgg
     3661 cctcgattcg gcctacgcca cggcgatggc gggggtcgtc gtgaaattcc ccgacgatct
     3721 ggaggccgcc accctgcacg cggaagcgct gatggacctg cgaccgtggg cctattggga
     3781 gaaggacggt accccggcgc cgcagaccga gcgactggtt tcccaattgg agaaagtgat
     3841 cgcggccgac tccacccatc caggagcctg tcactacttc atccacgcgg tggaggccgt
     3901 ggcaccggcg cgggccctgc cctgcgcgga gcggctggcg gaattgatgc cgggtgcggg
     3961 gcatctggtt cacatgccgg cgcacatcta cgtccgggtg ggccgctacg ccgacgcgat
     4021 cgagcacaac cagcatgcca cccatgtcga ctcggtgtac gcggcggcgg aacgcccgtc
     4081 gatggtctac gccgggctct acatccctca caaccaccat ttcctgggct tcgccgccct
     4141 gctggccggg cagagcgccg ccgccatcga gtcggctcga ctcacggtgg ccaaggcgcc
     4201 ggtggcggcg ctgcaggcgt tgccggagtt ccagccgatg gcggcgttcg agcatatcgt
     4261 gctgctcaag ttcggccgct gggaggacgt tttggcgctg cctgcccctc cgaccgatct
     4321 gccggttgcg tgggcggtgg cgatgtacgg ccgcggcacc gcgctcgcgg ccaccggaaa
     4381 agccgaggcc gccgcggccc acagcgacag catcgccgcg gtggggacga ggctgcctga
     4441 cggcatcgcc aggagcatcg tcgagatcgc gcagcactca ttggcgggcg agctggccgc
     4501 gcgccgcaag cagtggcgcg tggccgagac tcatttccgc gccgccatgg cgatcgagga
     4561 ccagctgccg tacatggagc cgccctggtg gatcgagccg gtccggcatg cgttgggtgc
     4621 cgcactccta agcgggggtc gagctcgcca ggcggagacg gtgtaccgcg aggatctgca
     4681 gcggtttccg gccaacggct gggcgctgta tggcctgtgg cagagccttc gggcccagcg
     4741 gagtccggac gccacccagg cggaggcgga tttcaaacag gcctggagcg cggcggatgt
     4801 ccagctgagt acgtcgcacc cctagccgcc ggtgtatcgt tcaaccatgc cgttccacag
     4861 ctacagcaag ttcatccccg agctggccga ttcggtcaat ctccaggatc tcatcgagcg
     4921 gttgggtgat ttcctgctgc agtccgggtt tgcctcgcag gggatgttct cctgggaggg
     4981 cgaggagtcc gccggagaca accgctcgct ggaggcgctc aagcaggcca ttctgcaggc
     5041 cctgatggag tcggggcaac tcacgcccga gatgctccgc tacctgcggg gcgagt
//
LOCUS       DASWKS010000591         9851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2915524, whole genome shotgun sequence.
ACCESSION   DASWKS010000591 DASWKS010000000
VERSION     DASWKS010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9851
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2915524"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VGA78_16835"
     CDS             <1..329
                     /locus_tag="VGA78_16835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895599.1"
                     /translation="TSGASLTGNDFGNAQPRGAVLLLIDEDGIDNGLHYNESGGPIIP
                     AGPQLFSPGDVNDDKPSHTMRDVLRYFAQNIDRTITVVTGRTDDEGWFAPNCIPQKWL
                     TGGSNN"
     gene            464..724
                     /locus_tag="VGA78_16840"
     CDS             464..724
                     /locus_tag="VGA78_16840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895600.1"
                     /translation="MNGNLQGETLGIVAFHVNEVRTLNGFSSSTLPEVQITILSTSVC
                     GNWVLFNAPVPASSSVPNDRVAPGSPAGYYSLKVWAALPVFY"
     gene            complement(847..1233)
                     /locus_tag="VGA78_16845"
     CDS             complement(847..1233)
                     /locus_tag="VGA78_16845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895601.1"
                     /translation="MTADADITPARDPENLERLAAALRELDARIYTESVPEGLPFDCS
                     PAMLSRADLWNLITSAGRLDVAFKPSGTEGYDDLVRNAVTFEVFGTTLGAASLEDIIR
                     SKQAAARPQDRQDVVVLRQMIRKRSK"
     gene            complement(1340..1666)
                     /locus_tag="VGA78_16850"
     CDS             complement(1340..1666)
                     /locus_tag="VGA78_16850"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX9895602.1"
                     /translation="MPRPVSAALLLLARRQAGLSQRDLARRAGTSQSVVARIEGGTTS
                     PTWDTLARLLRVAGFDLRASLEPRPTADSHMLDDVPRILRLTPEQRLEELGNVARFLG
                     SARRHA"
     gene            complement(1848..2009)
                     /locus_tag="VGA78_16855"
     CDS             complement(1848..2009)
                     /locus_tag="VGA78_16855"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HEX9895603.1"
                     /translation="MPARAGQGWSCSRFRNVLVHEYVALDLDRVADAMGRLQPIERFL
                     EIVRAGLQG"
     gene            complement(2226..2663)
                     /locus_tag="VGA78_16860"
     CDS             complement(2226..2663)
                     /locus_tag="VGA78_16860"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX9895604.1"
                     /translation="MTSRLTEFFDRHPREGLAVVYLFGSHAEGRPHRESDVDLGLVFR
                     FDLLPTSRERFEAGARLISQLSGALGALTVDVVVLNDAPPGLAAPVATGGRVVYSADE
                     SLEHSFRRDAQLRAADLEPFLRRTRRISWRRWAVDPVPGGTPG"
     gene            2966..3799
                     /locus_tag="VGA78_16865"
     CDS             2966..3799
                     /locus_tag="VGA78_16865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895605.1"
                     /translation="MSNQNAIRTGLLLCATVACGEDSVTDPPDVPFGETTLVVIVNPV
                     VNTLNQASLPVLPGTARDGVNVAVAGGPSGQTDASGVVVLTPVAGGSRTLSLSGGGSS
                     GQVQASVVERDLRELAVALDGNAATILADIQYPFGGTVVEVTPSMSVAEVNAQLARSN
                     VIVFFRAGSYSGNLDFSGSSVTLFGEGAQGGTVTLQGDVQVTGSRNRIRGARITGTLT
                     VPGSDFGMSFSRVQGAAAVSGSDASLLHNGFCIAPAITGSGATLLGNAGLAPIAPPAG
                     C"
     gene            complement(3897..4121)
                     /locus_tag="VGA78_16870"
     CDS             complement(3897..4121)
                     /locus_tag="VGA78_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895606.1"
                     /translation="MLAVPRPATYVARFDTQDERGVHLLNAGRHDPATASNSLDEFLA
                     RTRKFGVKAEQKHLVIPSPEVSRIRKLAEV"
     gene            complement(4202..4357)
                     /locus_tag="VGA78_16875"
     CDS             complement(4202..4357)
                     /locus_tag="VGA78_16875"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HEX9895607.1"
                     /translation="MVSELERLPGFRNVLVHEYVALDLDRVIEALDRLAPIEQFLGIV
                     RAGLAAG"
     gene            complement(4614..5045)
                     /locus_tag="VGA78_16880"
     CDS             complement(4614..5045)
                     /locus_tag="VGA78_16880"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX9895608.1"
                     /translation="MKPAPPSPLLRLSDFLARRVPDGLAVVYLFGGHAEGRAHRESDV
                     DLGVVFRYDVLPTARERFEAGLRLASELIGALGGLPLDLVVLNDAPPGLGARVATTGQ
                     VLYCSDPSLEHAFRRDAQLRAADLVPFLRRTRRIKLEALGR"
     gene            complement(5042..5323)
                     /locus_tag="VGA78_16885"
     CDS             complement(5042..5323)
                     /locus_tag="VGA78_16885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895609.1"
                     /translation="MTGFVFHPGHHELHGVTVVLETITGVTYVARFDTQDEAGVHLLN
                     VAQHDPATAAMSLDDFLTRTLRFGVKAERKHLVVPAAEVAGIRKLVEEP"
     gene            complement(5396..5851)
                     /locus_tag="VGA78_16890"
     CDS             complement(5396..5851)
                     /locus_tag="VGA78_16890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HEX9895610.1"
                     /translation="MPYQELMVRPMREELTQLGVKELKTLAEVDAVLANPTGTQLVFV
                     NSVCGCAAGGARPALALALGSAPVKPEQLYTVFAGQDLEATARARSYFADYEPSSPSI
                     ALLKDGEVVHFVHRHMIEGRHPQQLAADLVAAFQKHCGEAMSRPSSTVS"
     gene            complement(5960..6400)
                     /locus_tag="VGA78_16895"
     CDS             complement(5960..6400)
                     /locus_tag="VGA78_16895"
                     /inference="COORDINATES: protein motif:HMM:TIGR01994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEX9895611.1"
                     /translation="MTDLDELYQSVIIEHDRHPRNFRTLEGPHRSAEGYNPLCGDRVK
                     VMVSVEDGVITDLSFQGMGCAISKASASLMTETLKGRSVAEAERLFEGFRETLTDGRT
                     DGQTDYPLPPKLQVFRGVTKYPMRVKCATLAWHAMKEALNNSER"
     gene            complement(6397..7635)
                     /locus_tag="VGA78_16900"
     CDS             complement(6397..7635)
                     /locus_tag="VGA78_16900"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020359689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SufS family cysteine desulfurase"
                     /protein_id="HEX9895612.1"
                     /translation="MRTSVPAFDVERVRADFPILSREVRGGRLAYLDSAASAQKPRVV
                     VQALSNFYLNYNSNVHRGVHLLAEEATQAFDTARERVRRFLNAASSEEIVFTHGTTAG
                     LNLLAQGWAAVALKPGDEIVLTVMEHHSNIVPWQLAAHRIGAVLRVVPVTPDGTLDLD
                     QYARLVTERTRLVSVSHVSNVLGTVAPVARMAALAHQVGAVVVVDAAQSVPHMRVDVR
                     ELDCDFLVFSGHKLYGPMGIGVLYGRRHLLERLPPWQGGGGMIEKVTFEATTWALPPA
                     RFEAGTPPVAEAIALATAMDYVESIGLDAIHAHEAALLAEATERMSGLEKLRIIGTSP
                     GKAAVLSFVLDDIHPHDLGTILDAGGVAVRAGHHCAQPLMAHFQLPATVRASFGMYSS
                     RDDIDQLVGALGEARRRFTL"
     gene            complement(7665..9032)
                     /gene="sufD"
                     /locus_tag="VGA78_16905"
     CDS             complement(7665..9032)
                     /gene="sufD"
                     /locus_tag="VGA78_16905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEX9895613.1"
                     /translation="MTEAYRTAFAAQTEAATPRVGALRAEGIMRFTAQGFPPTRHEEW
                     RFTPITPLTRGVFAPAGAPLVPLTRAQVSQFRFGHPEWPVLVFVNGRFAPELSTLAAL
                     PDGSVTGSLAEALARWPALVEPHLARQVGPDATPFTALNAAFIQDGAFIRIRAGAELQ
                     DPIQICFVTTEDAAGSMTHPRNLILVEPGARAAVIESYHGPSSTLLDPPRPPSTVYFT
                     NAVTEVVLGENAWFEHVRIQRESGTAYHIAFSQVQQAEGSHYRSFTLAMGAAISRHNL
                     HTRLNAPNTEALLYGLTIAQGEELVDNHTAIYHDQPDCRSWEVYKAILDDKSRAVFNG
                     KVFVQPEAQKTDAKQTNRTLLLSDEARVDTKPQLEIFADDVKCTHGAAVGYLDELPLF
                     YFRSRGVPEEQARRLLTYAFAAEVLDEVHVEPVRLELDRLVRERLGVTEKQEAGSREQ
                     GGGSS"
     gene            complement(9029..9787)
                     /gene="sufC"
                     /locus_tag="VGA78_16910"
     CDS             complement(9029..9787)
                     /gene="sufC"
                     /locus_tag="VGA78_16910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEX9895614.1"
                     /translation="MLEVKDLKANAGDKEILKGISLTVNAGEVHAIMGPNGSGKSTLA
                     QVLAGHPGLTVTAGSATFDGQDLLDMEPEERAQAGLFLAFQYPVEIPGVSNAYFLRSA
                     YNAIRKARGEEELDPIDFMDLLEQKLEVVQWGPELASRAVNSGFSGGEKKRNEILQMA
                     VLEPKLAILDETDSGLDIDALRIVADGVNALRRPDRAIVLVTHYQRLLNYIVPDVVHV
                     LVDGQIAKSGGKELALELEEKGYEWLTGVAEATA"
BASE COUNT         1717 a         3277 c         3250 g         1607 t
ORIGIN      
        1 ttacctccgg ggcgtccctg acaggcaacg acttcggcaa tgcccagccg cgaggtgcgg
       61 tccttctgct gatcgatgag gatggcatcg acaacggcct ccactacaac gagagtggcg
      121 gcccgatcat tccggctggc ccgcagctct tcagccccgg ggatgtcaac gatgacaagc
      181 cgagccacac catgcgggac gtgcttcgct acttcgccca gaacatcgat cggaccatta
      241 cggtggtcac tggccggacc gatgacgagg gttggtttgc gccgaactgc atcccacaaa
      301 aatggctcac cggtgggagc aacaactgac tgacgggcgc cgatcgtcaa acggcgatcg
      361 acgactactt cggtgtgaac ggtccggggg ctatcccgcc gcgtgcgccg tcgtctacga
      421 cagcgatatc tccatcaact acgatctcgg gaagccgctc ggcgtgaacg gtaacctgca
      481 gggcgagacg ctcggcatcg tggcgttcca cgttaacgag gtccggacgc tcaacggttt
      541 ctcgagcagc acgctgcctg aggttcagat cacgattctc agtacctcgg tctgcggcaa
      601 ctgggtgctc ttcaacgctc ccgtgccagc gagctcctcc gtgcctaacg accgggtagc
      661 ccccgggtct ccggccgggt actattcact caaggtctgg gcggctttgc ccgtgttcta
      721 ctagcgctgg ccggctgccg gttctgattc agtgatcggc ggtggagggg cggtcgggga
      781 gttcccggcc gcccctcttt cggatccctt gaatctcggc cgaagaaacc aaccaggtgc
      841 ttctcatcat ttcgatcgtt tcctgatcat ctgacgcaaa acgacgacgt cctgacggtc
      901 ctggggcctg gcagccgctt gcttggatcg gataatgtct tccaaagagg cagcgcccag
      961 ggttgtgcca aacacctcga aggtgacggc gttgcgtacc aggtcgtcgt agccttcggt
     1021 gccgctcggc ttgaaggcga cgtcaagccg gccggccgac gtgatcaaat tccagagatc
     1081 cgcccgcgac agcatggcgg gactgcaatc gaagggcagg ccctcaggaa ccgattcggt
     1141 gtaaatccgt gcgtccagct cgcggagcgc agcagccagt cgttccaggt tctcaggatc
     1201 ccgcgcgggt gtgatgtcgg cgtcggcggt catccggggg aacccctgaa gccgagccgc
     1261 gacagcaccg atcaagacgt aacgcacccc gtgcttccca agcgtgacga gcagcctctc
     1321 gggatccagc ggagcgacgt caggcatggc gccgggccga gccgagaaat cgcgcgacgt
     1381 tgcccaactc ctcgagccgc tgctcgggcg tcaggcgaag gatgcggggc acgtcatcca
     1441 gcatgtggga gtcggccgtg gggcgtggtt ccaggctggc ccgaagatca aagcctgcca
     1501 cacggagcag ccgggccaga gtgtcccagg tcgggctggt ggtccccccc tcgatccggg
     1561 caaccaccga ctgcgaagta ccggcccgcc gggccaggtc gcgctgcgaa agccccgcct
     1621 ggcggcgggc caggagcagc agggcagcgc tcacgggtcg gggcatgaga tgaagatagc
     1681 taaaaagcta tcacggtcaa agcggtctgg gggttagtgc gccagcgctg ccagccgctg
     1741 ctcgaccccg gaacgccgct cgtcgaattg cggatcggcc gggacatcgg agccttcgac
     1801 tggcaaccgt cgcccggggg caaggggaaa ggctccaaat accgggttca gccctggagc
     1861 cccgcccgga cgatctccag aaaccgctcg atcggctgga gccggcccat cgcgtcagcg
     1921 acacggtcca gatcgagtgc cacatactca tgaaccagca cgtttcggaa gcgggagcag
     1981 ctccaacctt gaccagctcg ggccggaatc gagggtcacg cccaagattg cgcaccgcct
     2041 gggtatggtc ctcaaaccgg tccccgcgct gggccgacag atcgcccgcc acgtcgatca
     2101 ccaactgcca aacgctcaat aaggagaaca gcacatcgtt gtgaagtgac agatcgcgtt
     2161 cgagggacgt gcggtcctgg atccgcggcc gaagacgcgc caggtggtcg agataccgcc
     2221 gcagctcaac caggcgttcc accaggtacg gggtcaacgg cccagcgcct ccagctgatg
     2281 cggcgggtac gccggagaaa tggctccagg tccgccgccc gaagttgggc atcgcgacga
     2341 aaggaatgct ccagcgactc gtcggcggaa tagaccaccc ggcccccggt cgccaccggt
     2401 gcagccagcc cgggcggagc atcgttgagc actacgacat ccaccgtgag cgcccccagg
     2461 gccccgctca gctgagagat cagacgggct cccgcctcaa accgttcccg cgaggtaggc
     2521 agcaggtcaa agcggaacac caaccccagg tcaacatcgc tttcccggtg cggccttccc
     2581 tcggcatgac tcccgaacag gtagaccacg gccagtcctt ccctcgggtg ccggtcgaaa
     2641 aactcagtca atcttgatgt catgtcaggt accgaggagt tcatggatca gaatttaccg
     2701 ttacgctggc ggcatcgaca tcctggcttt gcggccgcag gggtgagcca atgctccggg
     2761 ccctcggcgt ttggcggaga aatccatgcc gcggttctgg aacgaggggt gcagagctag
     2821 acctcagcca gcttccggat tcgggtgacc tcgccggggt gccagatccc gcatcaggaa
     2881 ggccatcaca gccctcttcc tctagtgctg cgacacacgg ggcgaccaac acgaggatta
     2941 tcaacggatt ttgaggaggc cttcgatgtc gaaccaaaac gcaatccgca cggggctgct
     3001 gctttgcgcc acggtcgcct gcggggagga ctcggtcacc gaccccccgg acgtgccgtt
     3061 tggcgagacc accctggtgg tgatcgtgaa cccggtggtt aacacgctga accaggcatc
     3121 cctgccggtc cttcccggca ccgcacggga cggggtgaat gtcgccgtcg cgggtgggcc
     3181 gtccgggcag accgatgcga gcggcgtagt ggtgctgact ccggtcgctg gcggatcgcg
     3241 aaccctttcg ttgagcggcg gaggttccag cgggcaggtg caggccagcg ttgtcgaacg
     3301 ggacctgcgg gagctcgccg tggcgctgga cggcaacgcc gcgacgatcc tggccgatat
     3361 ccagtacccc ttcggcggga cggtggtcga ggttaccccg tccatgagcg tggccgaggt
     3421 gaacgcccag ctggcccgga gcaacgtcat cgtattcttc cgggccggca gctacagcgg
     3481 caatctggac ttctccggca gctcggtgac gctcttcggc gaaggggccc agggtggcac
     3541 ggtgaccctg cagggcgatg tgcaggtgac cggcagccga aaccggatcc gcggcgcccg
     3601 catcaccggc acgctcacgg tgccgggcag cgacttcggc atgtcgttca gccgggttca
     3661 gggggcggcg gccgtcagcg gcagcgacgc gagcctgctc cacaacggtt tctgcatcgc
     3721 gcccgcgatc acgggcagcg gggcaacgct cctgggcaac gccgggctgg cgccgatcgc
     3781 acctcccgca ggctgctgat caaagcagca gagcagacca gctcctgctc tccggtccgg
     3841 gcttacttgt ggatgacgat gctcccgccg ccctatcgac ctgcttgagg aacgggctaa
     3901 acttcggcca gcttgcggat ccggctgact tcgggtgaag gaattaccag atgcttctgc
     3961 tcggccttca ccccgaactt ccgggtccgg gccagaaatt catccagcga gttggacgcg
     4021 gtagcggggt cgtggcggcc ggcattgagg agatgcaccc cgcgttcgtc ctgggtgtcg
     4081 aagcgggcga cgtaggtggc cgggcgaggg accgcgagca cttgatcgag ctggaagcac
     4141 ttcgagcgct acgatccggc aatagcacct cggccgcgcg gcggcatcgg acgcgagggc
     4201 actaaccggc cgcgaggccg gcccgcacga tgccgaggaa ctgctcgatg ggcgccaggc
     4261 gatcgagcgc ctcgatcact cgatcgagat ccagcgccac gtattcgtgg accagcacgt
     4321 tgcgaaagcc cgggagccgc tccagctcgc tgaccaactc aggtggaaag cgggggtcgc
     4381 ggccaggttc cgcacggcct cgctatagtc ctcgaagcgg tcgccccgct gagccgagaa
     4441 gtcgccggcg acatcgatta ccagctgaca gacggtgagg agggagaaca ggacatcatt
     4501 gtggagcgag agatcgcgtt ccagtacggc ccgtccggat acacgagggc gaagctgggc
     4561 gagatgatcg aggtggcgcc ggagctcggc gagccgctcg accaggtagg gactcaccgg
     4621 ccgagtgcct cgagcttgat ccgccgggtg cggcggagga aagggaccag atcggccgcc
     4681 cggagctgag cgtcgcgccg aaacgcatgc tccagcgatg ggtcggagca atagagcacc
     4741 tgacccgtcg tcgcgacccg tgcgcccagg ccgggcgggg catcgttcag caccacgaga
     4801 tccaacggta gtccacccag cgcaccgatc agttccgagg ctaggcggag ccctgcctcg
     4861 aagcgctccc gggcggtcgg cagcacgtcg tagcggaaca ccacccccag gtccacgtcg
     4921 ctctcccgat gggcccgccc ctcggcgtgg cctccgaaca ggtagaccac cgcgagcccg
     4981 tcagggaccc gccgggcgag gaagtcggag aggcgaagga gcgggctggg cggtgcaggc
     5041 ttcatggttc ctcgaccagc ttccggatcc ctgccacctc ggccgccggc accaccaggt
     5101 gtttccgctc ggccttgacg ccgaacctca gggtccgggt cagaaaatca tccagggaca
     5161 ttgccgcggt agccggatcg tgctgcgcca cgttgagcag gtgcactccg gcctcgtcct
     5221 gggtgtcgaa ccgggccacg taggtgacgc cggtgatggt ctccagcacg acggtaacgc
     5281 cgtgcagctc gtggtgcccg ggatggaaga cgaagccggt cattgggaca ggttcggtga
     5341 acagtgaacg ggaaacagtc aacagtaaac ggtgaaggcc atccggaaga ccgcgttaac
     5401 tgaccgttga agacggacgg ctcatcgctt ccccgcagtg cttttgaaat gccgccacca
     5461 gatcggcagc gagctgctgc gggtggcggc cctcgatcat gtggcggtga acgaagtgca
     5521 ccacctcgcc atccttgagc agcgcgatgg acgggctgga cggctcgtag tccgcgaaat
     5581 agctccgggc ccgcgccgtg gcctcgagat cctgccccgc gaacacggtg tagagctgct
     5641 ccggcttgac cggcgcgctg ccgagcgcca gcgccagcgc cggccgagcc ccgcccgcgg
     5701 cacaaccgca gaccgagttc acgaagacca gctgggtgcc ggtgggattg gccagaaccg
     5761 catccacctc ggccagggtc tttagctcct tcacgcccaa ctgcgtcagc tcttcgcgca
     5821 tggggcggac catcaactct tggtacggca ttcaaaatct cccattggaa cagtgaacgg
     5881 tgaacagtga acggtgagca gcgaaccagt cgcggacccc gcgtccactg tttaccgttt
     5941 actgttcacc gttcaccgtt caccgttcac tgttattgag cgcttccttc atcgcatgcc
     6001 acgccagcgt cgcgcacttc acccgcatgg ggtatttcgt cacacccctg aaaacctgca
     6061 gtttgggggg gagaggatag tccgtctgtc cgtccgtccg tccgtccgtc agagtctccc
     6121 gaaatccttc gaacaaccgt tccgcctccg ccacgctccg acccttcaga gtctcggtca
     6181 tcaggctggc ggacgccttt gagatggcgc agcccatccc ttgaaagctc agatcggtga
     6241 tcacaccgtc ttccacgctc accatcacct tcacccgatc gccgcagagc gggttatacc
     6301 cctccgccga gcgatgaggc ccttccagcg tccggaagtt ccggggatgc cggtcgtgct
     6361 cgatgatcac gctctggtac agctcgtcca ggtcggtcac agggtgaacc gccgccgcgc
     6421 ttcgccgagg gcacccacca gctggtcgat gtcgtcgcgc gagctgtaca tcccgaacga
     6481 ggcccgcacc gtggccggca gctggaagtg cgccatcagg ggctgggcgc aatgatgccc
     6541 ggcccgtacg gccacgccgc cggcatctag gatggtgccc aggtcgtggg ggtgaatgtc
     6601 gtccagcacg aaggagagca ccgccgcctt gccgggggag gtgccgatga tccggagctt
     6661 ctccagcccg ctcatccgct cggtggcctc ggccaggagc gcggcttcat gagcatgaat
     6721 ggcgtcgagc ccgatgctct ccacgtaatc catagccgtg gcgagggcga tcgcttcggc
     6781 caccgggggg gtgccggcct cgaaccgggc cggcggcaag gcccaggtgg tggcctcgaa
     6841 ggtcaccttc tcgatcatcc cgcccccgcc ctgccagggc ggcaaccgct ccaacaggtg
     6901 gcgccggccg tagagcacgc cgattcccat cggcccgtac agcttgtgcc ccgagaacac
     6961 caggaagtcg cagtccagct cccgcacgtc cacccgcatg tgcgggaccg actgggccgc
     7021 gtcgaccacg accaccgcac ccacctggtg agccagcgcc gccatccggg ccaccggagc
     7081 cacggtgccg agcacgttgg agacgtgact gacggagacc agccgggtcc gttcggtgac
     7141 cagccgggcg tactggtcca ggtcgagcgt gccgtcggga gtcacgggaa caacccgcag
     7201 cactgctccg atccggtggg ccgccagttg ccagggaacg atgttggagt ggtgctccat
     7261 gacggtgagc acgatctcat cgcccggctt gagggccacc gcggcccagc cctgggccag
     7321 cagattcaag cccgcggtgg tgccgtgggt gaagacgatc tcctccgacg aggcggcgtt
     7381 caggaaccgc cgcacccgtt cccgcgccgt gtcgaacgcc tgggtggcct cctcggccag
     7441 caggtgcaca ccgcgatgga cgttggagtt gtagttgagg tagaagttgc tcagcgcctg
     7501 caccaccaca cgcggcttct gggccgacgc ggcgctgtcg agataggcca accgcccgcc
     7561 cctgacttcc cggctcagga tcgggaagtc ggcccggacc cgctcaacgt cgaaagccgg
     7621 aacggaggtc ctcaccgcga gggcgtcgga aggcctggtg atggtcacga cgagccccct
     7681 ccctgctccc tgctccctgc ttcctgtttt tccgtgacgc ccagccgttc ccgcaccagc
     7741 cgatccaact ccaggcgtac cggctccaca tgcacctcgt ccaatacctc ggccgcgaag
     7801 gcataggtca gcagccggcg ggcctgttcc tccggcacgc cccggctccg gaagtaaaac
     7861 agcggcagct cgtcgagata tccaaccgcg gcgccatggg tgcacttcac gtcgtcggcg
     7921 aagatctcga gctgcggctt ggtgtcgacc cgggcctcat ccgatagcag cagggtgcga
     7981 ttggtctgct tggcgtcggt cttctgggcc tcgggctgga cgaacacctt gccgttgaac
     8041 accgcgcgcg acttgtcgtc gaggatggcc ttgtagacct cccagctgcg gcagtcgggc
     8101 tggtcgtgat agatggcggt gtgattgtcc accagctcct cgccctgcgc gatggtgagg
     8161 ccgtagagca gggcctcggt gttgggcgca ttcaaccggg tatggagatt gtgccggctg
     8221 atcgccgcac ccatcgccag ggtgaaggag cgatagtggc tcccctccgc ctgctgcacc
     8281 tgggaaaagg cgatgtgata agcggtcccg ctctcgcgct gaatccggac atgctcgaac
     8341 caggcgttct caccaagtac aacctcggtc acggcgttcg tgaaatagac cgtcgagggg
     8401 ggtcgagggg ggtcgaggag ggtcgaggag ggtccgtgat agctctcgat taccgcggcg
     8461 cgggcgccgg gttccaccag gatgaggttg cgggggtggg tcatgcttcc ggccgcgtcc
     8521 tcggtggtga cgaaacagat ctggatcggg tcctggagct cggctcccgc gcggatccgg
     8581 atgaaggcgc cgtcctggat gaaggcggcg ttgagggcgg tgaagggggt ggcgtcgggt
     8641 ccgacctgac gggccaggtg cggctccacc agcgccggcc accgggccag cgcctcggcc
     8701 agcgaaccgg tgacgctgcc gtcgggcagc gccgccaggg tggacagctc gggggcaaac
     8761 cggccgttca cgaacaccag caccggccac tcgggatggc cgaagcggaa ctgactcacc
     8821 tgggcccggg tgagcggcac cagcggagcc ccggccggcg caaacacacc gcgagtgagc
     8881 ggcgtgatcg gcgtgaagcg ccactcctcg tgacgggtcg gcgggaagcc ctgggcggtg
     8941 aaccgcatga tgccctcggc ccgcagcgcg cccacccggg gcgtggccgc ctcggtctgc
     9001 gcggcaaacg cggtgcggta cgcctcggtc acgcggtcgc ctccgccacc ccggtcagcc
     9061 attcgtatcc cttctcctcc agctccagcg ccagctcctt gccacccgac ttggcgatct
     9121 ggccatccac cagcacgtgc acgacgtcgg gcacgatgta gttgagcagc cgctggtagt
     9181 gggtcaccag cacgatggcg cggtcgggcc ggcggagcgc attcacgccg tcggccacga
     9241 tccgcagggc atcgatgtcg agcccggaat cggtctcgtc cagaatcgcg agcttgggct
     9301 ccagcaccgc catctggagg atctcgttgc gcttcttctc gccgcccgag aaccccgagt
     9361 tgaccgcccg cgacgccagc tccggtcccc actgcaccac ctcgagcttc tgctccagca
     9421 ggtccatgaa gtcgatcgga tccagctcct cctcgccccg ggccttccgg atcgcgttgt
     9481 aggcggagcg gagaaagtag gcgttggaaa cgccggggat ctcgaccggg tactggaatg
     9541 ccaggaacag gccggcctgg gcccgctcct cgggctccat gtcgagcagg tcctgcccgt
     9601 cgaaggtggc cgagccggcg gtgaccgtca gccccgggtg ccccgccagc acctgggcca
     9661 gcgtgctctt gccggagccg ttgggtccca tgatggcgtg gacttcgccg gcgtttacgg
     9721 tcagcgagat ccccttcagg atctccttgt ccccggcgtt tgccttcaga tctttgactt
     9781 caagcatgac tggttgtctc agttggtttg cacccgacca cgggctggcg tggccgcctc
     9841 cgcggggcca t
//
LOCUS       DASWKS010000592         1980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1073731, whole genome shotgun sequence.
ACCESSION   DASWKS010000592 DASWKS010000000
VERSION     DASWKS010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073731"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VGA78_16915"
     CDS             <1..782
                     /locus_tag="VGA78_16915"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895615.1"
                     /translation="GADPASVQLAITRFKREAEVAASLRSPHTVELYDFGVTEDQALY
                     FVMEMLDGMDLERLVRRYGELPPGRVVYLLGQVCESLEEAHVRGLVHRDIKPSNIHVG
                     RLGLRHDFVKVLDFGLVKQVDGKGGGQTGATAEGIVPGTPDYMAPEMTMNQRIDGRTD
                     LYAVGCVAYYMLTARPVFEAANVFHMISRHLNEVPVPPSRVAKQPIPPELEQVILACL
                     AKSPEDRPRSATELARALEAVPAEPWGEAQAAEWWRTNPIA"
     gene            886..1458
                     /locus_tag="VGA78_16920"
     CDS             886..1458
                     /locus_tag="VGA78_16920"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX9895616.1"
                     /translation="MTGSSQTRLTAEQLYARPDRDRCELVRGALRVFEPPGGRHGAIA
                     VRLAARLAALVEAGRLGTVLEESGYVLRRDPDTVRGPDISFIAASRLPPGVVPVGFIP
                     DAPDLAVEILSAPDRPAEVEEKVADYLGAGTRLVWVVDPRRRRVIVHRGANVPRVLGA
                     GDVLDGEEVVPGFRLPIEVLFGDGSPAWPS"
     gene            1704..>1980
                     /locus_tag="VGA78_16925"
     CDS             1704..>1980
                     /locus_tag="VGA78_16925"
                     /inference="COORDINATES: protein motif:HMM:NF023174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3303 family protein"
                     /protein_id="HEX9895617.1"
                     /translation="MHYLVIEHFRDRDPLPIYRRFRARGRLMPEGLEYVSSWITEDLT
                     RCYQIMEAVDRGALEQWMGRWSDLMDFEVHPVLASAEVQKRLAPRLAQ"
BASE COUNT          310 a          640 c          700 g          330 t
ORIGIN      
        1 ccggggccga cccggcttcg gtccagctcg ccatcacccg gttcaaacgg gaggccgagg
       61 tcgcggccag tctgcgctcg ccccacaccg tagagctcta cgacttcggg gtcaccgagg
      121 accaggcgct ctacttcgtg atggagatgc tggacgggat ggacctggag cggctggtcc
      181 gccggtacgg cgagcttccg ccgggccggg tggtctatct cctgggccag gtctgcgagt
      241 cactggaaga ggcccacgtc cggggcctgg tgcatcgcga catcaagccc tccaatatcc
      301 atgtgggccg gctgggactg cggcatgatt tcgtgaaggt gctcgacttc ggtctggtga
      361 agcaggtcga cggcaaggga ggtggccaga ccggcgccac cgccgagggg atcgtccccg
      421 gcacgcccga ttacatggcg ccggaaatga ccatgaacca gcggatcgac ggccggaccg
      481 atctctatgc ggtgggctgc gtcgcctact acatgctgac cgcgcgtccg gtgttcgagg
      541 cggccaacgt cttccacatg atctcacgcc atctgaacga ggtcccggtc ccgccgtcgc
      601 gggtggcgaa gcagccgatc ccgccggagc tggagcaggt gatactcgcc tgcctcgcca
      661 agtcgcctga ggaccggccc cggagcgcca cggagctggc ccgggcgctg gaggcggtgc
      721 ccgccgagcc ctggggcgaa gcccaggcgg cggagtggtg gcggaccaac ccgatcgcgt
      781 gatggagcgg cctccgattc acctgggagg acggctcgga atgcgattcg ctccccgctt
      841 gaccgctcgg ccgagccgag cgtatcctcg gctgggaggc gtggtatgac cggttcttcg
      901 caaacccggc tgaccgcaga acagctctac gcccgccccg atcgggatcg gtgcgagctg
      961 gtgcgcggtg cgctccgggt cttcgagccc cctggtggac ggcacggcgc gatcgcggtc
     1021 cggctggccg ccaggctggc ggcgctggtc gaagccggcc ggctcggcac cgtcctcgag
     1081 gaaagcggct acgtactccg gcgagatccg gataccgtcc gcggtcccga catctcgttc
     1141 attgccgcct cccggctacc gcctggtgtc gtgccggtgg ggttcattcc ggatgcgccc
     1201 gatctggcgg tggagattct gtcggccccc gatcggcccg ccgaggtcga ggaaaaggtt
     1261 gccgactatc tcggcgccgg caccagactg gtctgggtgg tggacccgcg ccgccgccgg
     1321 gtaatcgttc accgcggcgc caatgtgcct cgggtgctcg gcgccggtga tgtgctggac
     1381 ggcgaagagg tggtgccggg cttccggctt ccgatagaag ttctctttgg agatgggagt
     1441 cccgcatggc cgagctgaag accagaccga ccggggcaag cgtggaaggg ttcctcgacg
     1501 agctcccaaa ctggatcctg cgccccagag tgtgtttccc ttattggaag taaccatcag
     1561 atggaggccc agcgcccggg gtggcgcgga ctcgatccgc gagatgccgg gccagcgcca
     1621 ggtcgcgcgc catcagtggc cgatagccta ctatcgtgga tggaaggcaa gcgcggaaca
     1681 gccgaagcga aagggcgtct ccggtgcact atctcgtcat cgagcacttc cgggatcggg
     1741 acccgttgcc tatttatcgg cgatttcggg cccggggccg tctcatgccg gaaggactcg
     1801 aatacgtctc gagctggatc acggaagacc tgacccggtg ctatcagatc atggaagccg
     1861 tcgaccgggg agcgctggag caatggatgg ggcgatggtc cgacctgatg gacttcgagg
     1921 tccaccccgt gcttgcgtcc gccgaggtcc agaagcggct cgctccccgg ctggcccagg
//
LOCUS       DASWKS010000593        11255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1431417, whole genome shotgun sequence.
ACCESSION   DASWKS010000593 DASWKS010000000
VERSION     DASWKS010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11255
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1431417"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1063
                     /locus_tag="VGA78_16930"
     CDS             <1..1063
                     /locus_tag="VGA78_16930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895618.1"
                     /translation="TYFRDGEKWEARGNVVLRNLKDGTVLRGPSLDYYRQIPGFKDTA
                     EMYAAERPTVTLPVKDSTRVEQEPYTVVGDWIRTRGNNRLIARGRVTIDRSDFRGRAD
                     SLYLDTGPANAGALIGSASLRRVASDSFDLSGERIDLELEQQELTYVTARDSAKLRSA
                     DMSLDSDIIGLDVNARKVEQTLAWGTAVRPLALSTGYEIRGDSLAFDTPDQALKEIRA
                     FGNAWVGAQPDSGTSDRDWIAGDTVRAEFVKRDSFGSERTAVNLIEARGEASALYRLR
                     QSGQTQASITYNKGDLIRIRMRLAGDSTTVDSVEVVGNVEGIHLQPAPARAPRDTTGA
                     DTTGTRRPAFAARRPRGHR"
     gene            1060..2220
                     /gene="lptB"
                     /locus_tag="VGA78_16935"
     CDS             1060..2220
                     /gene="lptB"
                     /locus_tag="VGA78_16935"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEX9895619.1"
                     /translation="MNGWRDRLEHLDPSLLAVLATLVRHADETTGLPLSDVVRGYRQV
                     LVAHHGDGTHAEAAGFRDSMLEQVQGVVLPRLVTGGWIHDSGDRGWDRVVPRGDWFTQ
                     AVQDRLASTDAILDLAFPLVSAVPEAPKAAGFVGGSRLQCEGLNKAFKRRRVVRDVSL
                     RLAQGEVIGLLGPNGAGKTTTFYLITGLIRPDSGSIQMDGRDITEAPMFRRARAGIGY
                     LAQEPSVFRKLTVEQNVLAILETLGLSREERQRRLEQLLDELSIKHLRKNKAYSLSGG
                     ERRRLEITRALVTSPKFMLLDEPFAGVDPIAVHDIQTIVGGLRHRGIGVVITDHNVEQ
                     TLEIVDRAYIMFEGSVQASGTVRELVFNEQVADLYLGPTLTARLRARMERTA"
     gene            2217..3734
                     /gene="rpoN"
                     /locus_tag="VGA78_16940"
     CDS             2217..3734
                     /gene="rpoN"
                     /locus_tag="VGA78_16940"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX9895620.1"
                     /translation="MKQGLTQQTGLRQELRINPRLYQAMDMLYMPMMDLQQHLKQELL
                     VNPFLELVEPEEEEQSNETAPDTEQEKEKAEKEQEIDWEEILLNGFDVGGTRQQFESQ
                     EYLEPIAVETADLIDHLREQLNLLRLTPRQALLGKELLGHINDDGYLGSSLEDVLASA
                     NQMLASHATAQMTEDEEEDFLAVEAQGNAHSNAVPGVPLFTPAEVEDALKIIQSLDPP
                     GVGARDLRECLMLQMREDLKVDGLAQQLVADAFEDLKAHRWNDLAKRYGVEPGRVQQA
                     ADSLASYDPKPGLKHTNRSDGYIIPDLVVEKVDGVYHVFLNDTGVPRLKLSRSYQEIA
                     RERGKLTQENREFITTKMNSANWMIQAIEQRRQTMLKVMSFIVDRQRAFFEKGVEYLK
                     PLTLREVADVISMHESTVSRVTNEKYVQTPRGVLPLKFFFSSALSTASGEDASARSIR
                     AKLEKMVGEEDAAKPLTDQQIVHLFQEQGIQIARRTVAKYRDQLGILPARMRKRV"
     gene            3731..4678
                     /locus_tag="VGA78_16945"
     CDS             3731..4678
                     /locus_tag="VGA78_16945"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DPM/DPG synthase family glycosyltransferase"
                     /protein_id="HEX9895621.1"
                     /translation="MTADPAVDVSVLVPAKDEAENLPELVRQCAQALGGAGFSFEVVI
                     VDDGSRDGSTEVLAQLSREFSWLRSVRHRRQRGIADALRSASDASSGDIAVFYPADLQ
                     YLPEDIPRLVQPILEGRADIVTGTKVGKYEKAFVSGVYNRLCRWLFGVKVEDLNSVKA
                     WRREVMSDQQFRPDWHRYMVVIAAAEGFRLTSVPVPLYPRRAGVSKFSWTRIPVGVFD
                     LLSVWFQLRFGRKPMLFFGLLGAALFFVGFLAGVVALVLRFGFGIGFRPLLNLVETMV
                     ISGIALFGFGFVGELVAGLREENREIARALGRIGRDAGR"
     gene            4683..5825
                     /locus_tag="VGA78_16950"
     CDS             4683..5825
                     /locus_tag="VGA78_16950"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895622.1"
                     /translation="MRVIFLTHNYPRFAGDIAGGFLHPLALALRARGVDVRVIAPSDA
                     GRGGSDVLDGVPIERVRYAAPERETLAYSGRMQDALSSPGGIAAFYSLGQALRSGAQS
                     AAEGHPDSVVHAHWWIPAGVAAPAELPLVLTSHGTDVRLLKRWAPARLLARPVYRRAR
                     VVTAVSRYLADLITSTTGRAVPPDCVQPMPVDTSHWNSSTGGGGLIAVARLTEQKRMH
                     LVVGAVARLQAMGRPIRCAIVGDGPERVRLEQLARAGQVQDLVEFTGQLEFPAVLSRL
                     QRADVAVIPARAEGFGLSAAEALMCGVPIVVCHDGGGLADLIEPGAGRAAPPDRVRIA
                     EAVDQLLRDEGAREAARGVGGLWRERLAPATVAARFEAWYHEALGA"
     gene            5818..6738
                     /locus_tag="VGA78_16955"
     CDS             5818..6738
                     /locus_tag="VGA78_16955"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEX9895623.1"
                     /translation="MHKPFWRVVQIVLGLATVVFVVWYVGDNWDDVRQARMAWRFSPL
                     HLLAAIGVVWLVFAIQAEAWRRMVAAWGNSLEWFPGASIWLLSSMAKYIPGKVWALAS
                     MAVMSERRGIPVWAATSSAVILQILSVGTGALVVAGTGLTVLHPAQPLGKAALALLAL
                     GSLGITVLVLWPPVTRWLVGRVAPKADLAHIPGLVAVTEGAVANLLAWVGYGAAFWLI
                     GRGALPQAPLGLVESIGAFAGSYVAGMIAPFAPGGLGVRESVLILMLQDRIGLANAIA
                     LAALGRLVTSVAEVIATVPFLMRARESLRG"
     gene            6731..9052
                     /locus_tag="VGA78_16960"
     CDS             6731..9052
                     /locus_tag="VGA78_16960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895624.1"
                     /translation="MGDFEPRRPALIATLVFVAAGLTLFWPILTGQFMAGPTSDMFVA
                     GYGFRLFGAEHFRAYGEIPQWNPYVFGGLPFIAAMHGDVFYPTAWLRWILPVDTAINL
                     GFAFHIVLAGCTMYAFVRALGVRWGGALAAGLTWELSGIVAGLVSPGHDGKLFVSAFA
                     PLLFLAVLRAVRDRRPAAFGLIGLTVGLSLHGHPQLTYYSLMAAGIWGLWLAFLAPER
                     PLARDRWRIIAGSAAGVLVGFGLYAIQLLPFLEYIPYSPRADGGASTGWDYVTAYALP
                     PAELMSLVLPEFNGILDAYWGSNPLKHHTEYFGLFPLALAVIGLGDRKRRHLILILGG
                     IGLLLLLIAFGSHTPFYRIVYEVLPMMKKARAPGMAFFMVAFPLAVFAGFGAERLLAG
                     EVSFRKALIPVGLLGAIGLLGVIGVLQPIAEAMAIPQRMSAVVENAPAVREGGLRLLA
                     LTALAMGVLWAVGAGQLRSGAAVAGVSAVIVADLWSVERRFFDFQPPASVTYGDDEIT
                     TALRQVPLPYRVLDSNIYFGSWLMAHRIPSLLGYHGNELRFFDDLLGGKNEWQYLGTP
                     AIWNLFAVRYLILPQPIEAQGWKQVLGPVPTARGVPAYLYEMEATPRWVTVLPVAAKV
                     PEAQLIPTLLDQRFPADRIVLFPDTTSVSPAAFGDTVPTAPTVQPTLASWRPGRMTIT
                     LSGQAAAPTWLVVSENWYPDWRATVDGRSVPTHRGQFSLITVELPPGAREVDLQFRSR
                     AYARGRLITFGSVVLALAMLVIPSVLERRRANG"
     gene            9045..9770
                     /locus_tag="VGA78_16965"
     CDS             9045..9770
                     /locus_tag="VGA78_16965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HEX9895625.1"
                     /translation="MADRLLVVLPTYNESRNLDQIVPAILSQDARIEILVVDDNSPDG
                     TGKIADAISETIDRVHVLHRPGKEGLGRAYLAGFRWGLDRGYDLLFEMDADFSHDPRF
                     LPDLIRVIEADGADLAIGSRYKTGVNVINWPMSRLILSSGANFYARVVTGMPLTDATG
                     GFKCFRRRVLEAIPLEKVRSNGYAFQIEMSYRAWRKGFKLVETPIIFTDRVEGQSKMS
                     KKIVREAVWMVWWLRLAGMLRRL"
     gene            9767..10597
                     /gene="dapF"
                     /locus_tag="VGA78_16970"
     CDS             9767..10597
                     /gene="dapF"
                     /locus_tag="VGA78_16970"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX9895626.1"
                     /translation="MSGTVFYKMTGSGNDFVILDGRHSSLTEWPGDRIVKVCDRRMGV
                     GADGLVILTPDPSGRIQFDFYNNDGSRGAMCGNAALCSTRLAAHLELADPEGMILCTD
                     AGLVRTRCTGPGHMAEINLPPFELPRPLAIDCRDGESALYFATVGVPHLVVVTEDVTA
                     VDVMGRGRELRYHGALAPAGANINFISPPAGGAGDPWMIRTYERGVEGETLACGTGTV
                     AAAFTLQATGIRSLPGEWLTARGIRLAVAGRLDDGQAVDAWLCGEGRLVYTGVLAGGA
                     "
     gene            complement(10598..>11255)
                     /locus_tag="VGA78_16975"
     CDS             complement(10598..>11255)
                     /locus_tag="VGA78_16975"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX9895627.1"
                     /translation="RELYGGRHHLVASSLTDLGLLLDRARRPDDAERLLREAVELLRA
                     TYPDGHPQLAGTLRFWAQVLEHLERFQEAEAPLRQAIALRRRFTGENTIDVAMGEMDL
                     AYALTMSGRYEESASLARDAIRILQTELGENNAMVFRARTRLGDALRGEGNYAEAEPL
                     LLASYGRFAIPNSVTRPWRAAALHALVRLYEAQGRTEDAAKYRGLLSSPSPQPTKTNP
                     "
BASE COUNT         1728 a         3640 c         3930 g         1957 t
ORIGIN      
        1 gacctacttc cgcgacggtg agaagtggga ggcccgcggc aacgtggtgc tgcggaacct
       61 gaaagacggt accgtgctgc gggggcccag cctggactac taccgccaga tccccggctt
      121 caaggacacc gccgagatgt acgcggcgga gcggcccacc gtgacccttc cggtcaagga
      181 ctcgacccgg gtggagcagg agccttacac ggtggtgggc gactggatcc gcaccagggg
      241 caacaaccgg ctgatcgccc gggggcgggt caccatcgac cggtccgatt tccggggccg
      301 ggccgactcg ctctacctcg ataccggtcc ggccaacgcc ggggccctca tcggctcggc
      361 gtcgttacgg cgggtggcca gcgacagctt cgacctgagc ggcgaacgga tcgatctcga
      421 gctggagcag caggagctga cctacgtgac tgcgcgggac tcggccaagc tccgcagcgc
      481 cgacatgagc ctggatagcg acatcatcgg cctggacgtg aatgcgcgga aggtcgagca
      541 gaccctcgcc tgggggacgg cggtccggcc cctggcgctc tccaccgggt atgagatccg
      601 gggcgactcg ctggcgttcg atacgccgga ccaggccctc aaggaaattc gcgccttcgg
      661 gaatgcctgg gtcggtgccc agcccgattc gggcaccagc gaccgggact ggatcgcggg
      721 cgatacggtg cgagcggaat tcgtgaagcg ggattcgttc gggtcggagc gcaccgcggt
      781 gaatctgatc gaggcccggg gagaagccag cgcgctctac cggctgcggc agtcgggaca
      841 gacccaggcc tccatcacct acaacaaagg cgatctgatc cggatccgaa tgcggctggc
      901 gggcgattcg accacggtcg acagcgtcga agtggtgggc aacgtggagg ggattcatct
      961 gcagccggcg ccggcccggg caccacgcga caccaccggg gcggacacca ccggtacccg
     1021 ccgtcccgcc ttcgcggccc ggcgtccccg aggtcaccga tgaacggctg gcgggaccgg
     1081 ctcgagcacc tcgatccgtc gctcctggcc gtcctggcga cgctggtacg gcacgccgac
     1141 gagaccacgg gcctgccgct ctccgacgtg gtgcggggct accgccaggt gctggtggcg
     1201 caccatggcg acggcactca tgcggaggcg gccggattcc gggattcgat gctggagcag
     1261 gtccagggtg tggtcctgcc gcgcctggtc accgggggat ggattcacga ctccggcgat
     1321 cggggatggg accgggtggt cccgcggggg gactggttta ctcaggcagt gcaggaccgc
     1381 ctggccagca ccgacgcgat tctggacttg gcctttccct tggtctcggc ggttccggag
     1441 gcgccgaagg ccgccgggtt cgtgggcgga agccgcctcc agtgcgaggg tctcaacaaa
     1501 gcgttcaagc ggcggagggt ggtgcgcgac gtctcgctcc ggctggccca gggcgaggtc
     1561 atcggcctgc tcggacccaa cggggcgggg aagacgacca ccttctatct cattacagga
     1621 cttattcgtc cggactcggg ctcgatccag atggatggcc gggacatcac cgaagccccc
     1681 atgttccggc gggctcgggc cggcatcggg tatctggccc aggagccctc ggtcttccgg
     1741 aaattgacgg tggaacagaa tgtgctagca atactggaga cgcttggtct gtcccgcgag
     1801 gagcggcagc ggcggctgga acagctgctg gacgaattgt ccatcaagca cctccggaag
     1861 aacaaggcgt attccttgtc cggcggcgag cgccgccgcc tcgagatcac ccgggcgctg
     1921 gtgaccagcc cgaaattcat gttgctcgat gagccgttcg cgggcgtcga tccgatcgcg
     1981 gtacacgaca tccaaaccat cgtgggcggt ctccggcacc gcgggatcgg cgtggtcatc
     2041 accgaccaca atgtcgagca gaccctcgag atcgtggatc gcgcgtacat catgttcgaa
     2101 ggctcggtcc aggcgtcggg cacggtgcgg gaactggtgt tcaacgagca ggtggcggac
     2161 ctctacctcg gacctactct gacggcccgg ttgcgggccc ggatggagag gacggcgtga
     2221 agcagggcct cactcagcag accggacttc ggcaggaact ccgcatcaat ccgcgcctgt
     2281 accaggcgat ggacatgctg tacatgccga tgatggatct ccagcagcac ctcaagcagg
     2341 agctgctggt caatccgttc ctggagctgg tggaacccga agaggaagag cagtcgaacg
     2401 agaccgcgcc cgataccgag caggagaagg agaaggccga gaaggagcag gagatcgact
     2461 gggaggagat cctcctcaac ggcttcgacg tgggcgggac ccggcagcag ttcgaatcgc
     2521 aggaatacct cgagcccatc gcggtggaaa ccgcggacct gatcgaccat ctgcgggagc
     2581 agctcaatct gctccggctc acgccgcgcc aggccctgct gggcaaggag ctgctgggcc
     2641 acatcaacga cgacggctac ctcggcagct cgctcgagga cgtgctggcc tctgccaacc
     2701 agatgctcgc ctctcacgcg accgcgcaga tgaccgagga cgaggaagag gacttcctcg
     2761 cggtcgaggc ccagggcaac gcccacagca acgcggtgcc gggcgtgccg ctgttcaccc
     2821 cggcggaggt ggaggacgcg ctcaagatca tccagtccct cgatcccccg ggggtgggcg
     2881 cgcgcgacct gcgggagtgc ctgatgctgc agatgcggga ggatctcaag gtcgacggcc
     2941 tggcgcagca gctggtggcc gatgccttcg aagatctcaa ggcccaccgc tggaacgacc
     3001 tggccaagcg ttacggggtg gagccaggcc gggtccagca ggcggccgat tcgcttgcta
     3061 gctacgatcc caagcccgga ctcaagcaca ccaaccggtc ggacgggtat atcatccccg
     3121 acctggtggt ggagaaggtg gacggtgtgt accacgtctt cctgaacgac accggcgtac
     3181 cgcggctcaa gctgtcgcgc tcctaccagg agatcgcccg ggagcggggc aagctgaccc
     3241 aggagaaccg cgagttcatt accaccaaga tgaattcggc caactggatg attcaggcca
     3301 tcgagcagcg gcgccagacc atgctcaagg tgatgagctt catcgtggac cggcagcggg
     3361 cctttttcga aaagggggtc gagtacctga agcccctgac gctgcgcgaa gtggcggacg
     3421 tcatcagcat gcacgagtcg accgtgagcc gggtgaccaa cgagaagtac gtccagacgc
     3481 cgcgcggggt gttgcccctc aagttcttct tctccagcgc cctctccacc gcgtcgggcg
     3541 aggacgccag cgcccgctcc atccgcgcca agctcgagaa gatggtgggc gaggaagacg
     3601 cggccaagcc gctcaccgac cagcagatcg tacatctctt ccaggaacag gggatccaga
     3661 tcgcccgccg caccgtcgcc aagtaccgcg accaactcgg gattctgccg gcccggatgc
     3721 gcaagcgggt atgaccgccg atccggcggt ggatgtcagc gtcctggtgc cggccaagga
     3781 cgaggccgag aacctccccg agctggttcg gcagtgcgcc caggcgttag gcggtgccgg
     3841 cttcagcttc gaagtggtaa tcgtcgacga cggctcccgc gacggatcga ccgaggtact
     3901 ggcgcagctg tcccgggaat tctcctggct ccggagcgtt cggcaccggc gccagcgcgg
     3961 catcgccgac gcgctccgga gcgccagtga cgcgtccagc ggcgatatcg cggtcttcta
     4021 tcccgccgac ctccagtacc tgccggagga tattccccgc ctggtccagc ccatcctcga
     4081 gggccgggcc gacatcgtca ccggcaccaa ggtggggaaa tacgagaagg ccttcgtgag
     4141 cggggtgtac aaccggctct gccgctggct cttcggggtc aaagtggaag acctgaactc
     4201 ggtgaaggcc tggcggcgcg aggtgatgtc ggaccagcag ttccggcccg actggcaccg
     4261 ctacatggtg gtgatcgcgg cggcggaggg tttccggctg acctcggtgc cggtcccgct
     4321 ctatccccgg cgggccgggg tctccaagtt cagctggacc cggatcccgg tgggcgtctt
     4381 cgacctgctg tcggtctggt tccagctccg attcggccgc aagccgatgc tcttcttcgg
     4441 gctgctgggc gccgcgctgt ttttcgtggg ctttctggcc ggcgtggtag cgctggtgct
     4501 ccgttttgga ttcggcatcg ggttccgccc actcctcaat ctggtcgaga ccatggtcat
     4561 cagcggcatt gcgctgttcg gcttcgggtt cgtcggcgag ctggtcgccg ggctgcgcga
     4621 ggagaatcgg gaaatcgcgc gtgcgctggg acggatagga cgggacgccg gtcgctgacg
     4681 acgtgcgcgt catcttcctg acccacaact atccccgatt cgccggcgac atcgccggcg
     4741 gctttcttca tccgctcgcc ctcgccttac gggcccgcgg cgtggacgta cgggtcatag
     4801 cccccagcga tgccggccgg ggcggctcgg acgtcctcga tggcgttccg atcgagcggg
     4861 tccgctacgc cgctcccgag cgggaaaccc tggcatacag cggccggatg caggacgcgc
     4921 tcagctcccc cggcggaatc gccgccttct attccctggg gcaagccctt cggtctggcg
     4981 cccagtcggc ggccgagggc cacccggatt cggtggttca cgcccactgg tggattccgg
     5041 cgggtgtggc ggctcccgcg gagctcccgc tggtgctgac ctcccacgga accgacgtaa
     5101 ggctgttgaa gcggtgggcc ccggcccgcc tgctggcccg tccggtctac cggcgggcgc
     5161 gggtggtgac ggcggtatcc cgttacctcg ccgacctcat cacgagcacc accgggcggg
     5221 cggtcccgcc ggactgcgtg caacccatgc cggtcgatac gtcacattgg aactccagca
     5281 ccggcggcgg gggactgatc gcggtggcgc gactcaccga acagaagcgc atgcacctgg
     5341 tggtcggcgc ggtcgcccgg ctccaggcca tgggacggcc catccgctgc gccatcgtcg
     5401 gtgacggtcc cgaacgggtc cggctggagc agctggcccg ggcgggacag gtgcaggacc
     5461 tggtggagtt caccggccag ctcgagttcc cggcggtcct ttcccggtta cagcgtgccg
     5521 acgtcgcggt cattccggct cgagccgaag gcttcgggct ctcggccgcc gaagcgctca
     5581 tgtgcggtgt gccgatcgtg gtctgccacg acgggggagg gttggccgac ttgatcgaac
     5641 cgggcgctgg acgggccgca ccacctgacc gggtccgcat cgccgaagcg gtcgaccagt
     5701 tgttgcgcga tgagggcgcg cgggaagccg cccggggcgt cggtgggctc tggcgcgagc
     5761 gattggcgcc ggcgacagtc gcggcccgct tcgaagcctg gtaccacgag gccctgggtg
     5821 cataaaccct tctggcgcgt ggtccagatc gtcctgggtc tggccacggt cgtcttcgtg
     5881 gtctggtacg tgggggataa ttgggacgac gtgcgccagg cccggatggc gtggcgcttc
     5941 tcacccctcc acctcctggc cgcgatcggg gtggtgtggc tggtgttcgc catccaggcc
     6001 gaagcctggc gccggatggt cgcggcctgg ggcaattccc tggagtggtt cccgggggct
     6061 tccatctggt tgttgtcgag catggcgaag tacatccccg ggaaggtgtg ggccctggca
     6121 agtatggcgg tcatgtcgga gcgtcggggc atcccggtct gggcggcgac ctcgtccgcc
     6181 gtcatcctgc agattctgtc ggtgggaacc ggcgcgttgg tggtagcggg caccggcctc
     6241 acggtgctgc atccggcgca gccgctgggg aaggcggccc tggcccttct cgccctgggg
     6301 agcctcggga tcactgtcct ggtgctctgg ccgccggtga cccgttggct ggtgggcagg
     6361 gtcgcgccca aggcggacct ggcgcacatt cccgggctgg tcgcggtgac ggaaggggcg
     6421 gtcgccaacc tgctggcgtg ggtcgggtac ggggccgcct tctggttgat tggccggggc
     6481 gcactgccgc aggccccgct cggtctggtg gaatccatcg gtgcgtttgc cggatcctac
     6541 gtcgcgggaa tgatcgcgcc cttcgccccc ggcgggctgg gagtacggga gagcgtgctg
     6601 atactgatgc tgcaggatcg gatcggtctg gccaacgcga ttgccctcgc cgccctcggt
     6661 cgcctggtga cctcggtggc cgaggtcatt gccaccgtcc cgttcctgat gcgtgcccgg
     6721 gagagtctcc gtgggtgact tcgagccgcg ccgtccggct ctcatcgcca cgctggtctt
     6781 cgtggccgcg gggctcacgc tgttctggcc cattctcacc gggcaattca tggccgggcc
     6841 gacctccgac atgttcgtcg cgggctatgg attccggctc ttcggtgccg agcacttccg
     6901 ggcctacggt gagatcccgc aatggaatcc ctacgtcttc ggtggtctac ccttcattgc
     6961 cgccatgcat ggcgatgtgt tctatcccac cgcctggctc cgctggattc tgccggtcga
     7021 caccgcgatc aacctcggct tcgcgttcca tatcgtgctg gccggctgca ccatgtacgc
     7081 cttcgtccgg gccctggggg tacggtgggg cggggcactc gcggccggtc tgacctggga
     7141 gctgtccggc attgtggccg gattggtgag cccggggcac gatggcaagc tgttcgtgtc
     7201 ggcgtttgcg ccgctgctgt ttctcgcggt gctccgggcg gttcgggatc ggcgtccggc
     7261 cgccttcggg ctgatcgggc tcacggtcgg cttgagcctc cacgggcatc cccagctgac
     7321 ctactactcg ctgatggcag ccgggatctg ggggctgtgg ctggcgtttc tcgcaccaga
     7381 gcgacctctg gctcgggatc gttggaggat catcgccggg tcggcggccg gggtgctggt
     7441 ggggttcggg ctgtacgcca ttcaattgct gccgtttctg gagtacatcc cctactcgcc
     7501 tcgggcggac gggggggcta gcaccggttg ggattacgtg actgcgtacg ctctcccgcc
     7561 ggccgagctg atgtcgctgg tgctgccgga attcaacggc atcctcgatg cctattgggg
     7621 ctcgaacccg ctcaagcacc acaccgaata tttcgggttg ttccccctcg ctctggccgt
     7681 gatcggcctg ggtgaccgca agcgccgcca cctcatcctg atcctggggg gcatcggact
     7741 gctgctcctg ctcatcgcgt ttggctcgca caccccattc tatcggatcg tgtacgaggt
     7801 cctgccgatg atgaagaagg cccgtgcccc gggcatggcg ttcttcatgg tcgcgttccc
     7861 cctggccgtg ttcgccgggt tcggagccga gcgattgctg gcgggcgaag tcagcttccg
     7921 gaaggccctc ataccggtcg ggttgctcgg cgcgatcggc ctgctgggcg tgatcggcgt
     7981 gctccagccc atcgccgagg ccatggccat tccgcaacgg atgagtgccg tggtggagaa
     8041 tgctccggcc gtccgggaag gcggactccg gctgttggcg ctcaccgcgt tggccatggg
     8101 cgtgctgtgg gccgtcggag cggggcagct ccgttcgggg gccgccgtcg ccggcgtctc
     8161 cgccgtgatc gtggcggatc tctggagcgt ggagcggcgg ttcttcgact tccagccgcc
     8221 ggcctcggtc acctacggcg acgacgagat caccacggcc ctccgccagg ttccgctgcc
     8281 gtaccgggtg ttggacagca acatctactt cggctcctgg ctcatggctc accgaatccc
     8341 gtccctcctg gggtaccatg gcaacgagct ccggttcttt gacgacctgc tcggaggaaa
     8401 gaacgaatgg caataccttg ggacgccggc gatctggaac ctgttcgcgg tccgctacct
     8461 catcctgccg cagccaatcg aggcgcaggg ctggaagcag gtgctgggtc ccgtgccaac
     8521 tgcccgggga gtcccggcct acctctatga gatggaggcg acgccgcggt gggtcacggt
     8581 gctgccggtc gcagcgaagg tgcccgaagc gcagctgatc ccgaccttgc tggaccagcg
     8641 gttcccggcc gaccgcatcg tgctgttccc cgataccacg tcggtgagcc cggcggcctt
     8701 tggggatacc gttccaaccg cgccgacggt gcagcctacc ctcgcctcat ggcggccggg
     8761 acgcatgacg atcacccttt cggggcaggc ggccgcaccg acctggctgg tcgtgagcga
     8821 gaactggtat ccggactgga gggcgacagt ggatgggcgg agcgtcccca cccatcgagg
     8881 ccagttctcc ctgattacgg tggagctgcc accaggggcc cgcgaggtgg acctgcagtt
     8941 ccgatcccgc gcctatgccc gtggccggct catcaccttc gggtcggtcg ttctggccct
     9001 ggcgatgctg gtgatccctt cggtgctgga gcggcgccgc gccaatggct gaccggctcc
     9061 tggtcgtttt gcccacctac aatgaaagcc ggaacctgga ccagatcgtt cccgcgatcc
     9121 tgagccagga cgcccggatc gagatcctgg tggtggacga caactcgccc gacggcaccg
     9181 gcaagatcgc cgacgccatc tcggagacca tcgatcgggt acacgtgttg catcggccgg
     9241 ggaaggaggg gctggggcgg gcctacctgg ccgggttccg ctggggcctg gaccggggct
     9301 acgacttgct gttcgaaatg gacgcggact tttcgcacga tccccgcttc ctgcccgacc
     9361 tcatccgcgt catcgaagcc gacggcgccg acctggcgat cggttcgcgc tacaagaccg
     9421 gagtcaacgt catcaactgg cccatgtcgc gactgatcct ctccagcggg gctaatttct
     9481 acgctcgggt ggtgaccggg atgccgctca ccgatgcgac cggcgggttc aagtgtttcc
     9541 gccggcgggt gctcgaggcg atccccctgg agaaggtccg gtccaacggt tatgccttcc
     9601 agatcgaaat gagctatcgt gcctggcgga agggcttcaa gctggtggag actcccatca
     9661 tcttcaccga ccgggtggaa ggtcagagca aaatgagcaa gaagatcgtg cgggaagccg
     9721 tctggatggt ctggtggctc cgcctggccg ggatgctgag gcggctgtga gcgggaccgt
     9781 cttctacaag atgaccggct cgggcaatga cttcgtcatc ctggacggtc ggcactccag
     9841 tctgacggag tggcccgggg accggatcgt caaggtgtgt gaccgccgca tgggagtggg
     9901 tgcggatggg ctggtgatcc tcaccccgga cccgagcggg cggatccagt tcgacttcta
     9961 caacaacgac ggatcgcggg gcgccatgtg cggtaacgcc gcgctctgct ccacccggct
    10021 cgccgcgcat ctcgagctgg ccgacccgga gggcatgatc ctgtgcaccg atgccggact
    10081 ggtgcggacc cgctgcaccg ggccggggca tatggccgag atcaatctgc cgccattcga
    10141 gctgccgcgg ccattggcca tcgactgccg ggacggtgaa tcggcgctgt acttcgccac
    10201 agtaggtgtg ccgcatctgg tggtggtgac cgaagatgtc acggcggtgg atgtcatggg
    10261 gcggggacgg gaactgcgat accatggcgc cctggcgccc gcgggtgcca acatcaactt
    10321 catcagcccg cccgccggcg gcgccggcga tccctggatg atccggacct atgagcgcgg
    10381 ggtcgaaggc gagaccctgg cgtgcgggac cggcacggtg gcggcggcgt tcaccctgca
    10441 ggcaaccggg attcggtcgc tccccggtga gtggctgacc gcgcgcggaa tccggctcgc
    10501 cgtcgccggc aggttggacg atggacaggc ggtcgacgcc tggctgtgtg gagaagggag
    10561 actggtttat accggagtgc tggcgggagg cgcctgacta ggggttggtc tttgtgggct
    10621 ggggcgaagg agagctcagc agcccgcgat acttcgcggc atcctccgtg cgtccttggg
    10681 cctcgtagag cctgacgagt gcgtgcagcg cggcagcgcg ccagggccgg gtgacggaat
    10741 tcgggatcgc gaacctgcca tacgacgcga gcaacagcgg ttctgcctca gcgtaattgc
    10801 cttccccccg cagggcatcg ccgagccggg tccgagcccg aaacaccatc gcgttgtttt
    10861 cgccgagctc ggtttgcagg atgcgaatgg cgtcacgcgc gagcgatgcc gactcctcgt
    10921 acctcccact catagtcagc gcataggcga gatccatctc ccccatcgcg acatcgatgg
    10981 tgttctcacc ggtgaagcgg cggcgcagcg cgattgcttg gcgaagcgga gcctctgctt
    11041 cctggaatcg ctccaggtgc tccaatactt gggcccagaa tctcagcgtc ccggccagct
    11101 gggggtgacc gtcggggtaa gtggcccgca gcaactcgac ggcctcgcga agcagtcgtt
    11161 cggcgtcgtc aggccggcgg gcccgatcga gcagcaatcc gagatcggtc aggctcgacg
    11221 ccaccaggtg atgccggccg ccatagagct cgcgg
//
LOCUS       DASWKS010000594         1694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1826646, whole genome shotgun sequence.
ACCESSION   DASWKS010000594 DASWKS010000000
VERSION     DASWKS010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1826646"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1190
                     /locus_tag="VGA78_16980"
     CDS             <1..1190
                     /locus_tag="VGA78_16980"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HEX9895628.1"
                     /translation="AHEVGHTIGLAHNYIASTQGRASVMDYPHPVAKLKDDGTIDLSD
                     AYLEGIGEWDKVAVTWGYQDFPEGTDQRAALERIIIQARDRGLTFLTDQDARPTGSAH
                     PGTHLWDNGADVTAELTRMMAVRRAALTRFGENAIRRGMPLALLEEALVPLYLHHRYQ
                     VEAAVKLVGGQSYGYALRGDGQEPVRAVPAPVQEQALRAVLGTLRASELKIPERLLQI
                     LPPRPAGFDATRELFDRETGPVFDAIRPAASAADLVASLLLDETRAARLVQQHALDPS
                     LPGLEDVIDRILGSVFTPTAGDAYESEIQRAIQRVVVERVMDLAAAAGMSQVRAIAAF
                     KLEELRGRLAGATPPVTAVPERAHRQLLASDIRHFQERDWTREGRPRAPVIPPGSPIG
                     TDR"
     gene            1249..>1694
                     /locus_tag="VGA78_16985"
     CDS             1249..>1694
                     /locus_tag="VGA78_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895629.1"
                     /translation="MRRFFLTCSILAALPLAAVVAQETTLPPTAKTGDVSSVDAIMAA
                     IYDVISGPAGQKRDWDRMRSLFVPGARLIPTGRGADGKRRAIVWTVEDYIKNSGPRLE
                     EMGFFEKEIGRVQEQYGSIVHLMSAYDSRRTADDATPFARGVNSFQL"
BASE COUNT          285 a          546 c          590 g          273 t
ORIGIN      
        1 cggcccacga ggtggggcat acgatcggac tggcccacaa ctacatcgcg agtactcagg
       61 gccgggcctc ggtaatggac tatccgcatc cggtagcgaa gctcaaggac gacgggacca
      121 tcgacctgtc cgatgcgtac ctggagggaa tcggcgagtg ggacaaggtg gccgtcacct
      181 ggggctacca ggatttcccc gaagggaccg accagcgggc cgcgctggaa cggatcatca
      241 tccaggcccg ggaccggggg ctcacctttc tcaccgatca ggacgcacgt cccaccggca
      301 gcgcgcatcc gggcacccac ttgtgggaca acggcgccga tgtgacggcg gagttgaccc
      361 ggatgatggc ggtgcggcgg gcggcgctca cccggtttgg agagaacgcg atccggcggg
      421 gaatgccgct ggcactgctg gaggaggccc tggtcccgtt ataccttcac caccgctacc
      481 aggtcgaagc cgccgtgaag ctggtgggcg ggcagtcgta cggctacgcg ctgcggggcg
      541 acgggcagga gccggtccgg gccgttcccg ccccggtgca ggagcaggcg ctccgcgcgg
      601 tgctggggac gctccgggcg agcgagctca agattcccga gcgcctgctg cagattctcc
      661 cgccccggcc ggcgggtttc gacgccaccc gcgagctgtt cgatcgtgag accggaccgg
      721 tcttcgacgc gatccggccc gccgccagcg cggccgacct ggtggcgtcg ctgctgttgg
      781 acgagacccg cgctgctcga ttggtgcagc agcacgcgct ggatccctcg ttgccggggc
      841 tggaggacgt gatcgaccgc atactgggct ccgtattcac gcccacggcg ggtgatgcct
      901 atgaatcgga aatccagaga gcgatacaac gggtagtcgt ggaacgggtc atggaccttg
      961 ccgcggcggc gggtatgtca caggtccggg cgatcgccgc gttcaagctg gaggagctgc
     1021 ggggccggct ggccggcgct acgcccccgg tgaccgcggt accggaacgg gcccaccggc
     1081 aacttctggc aagtgacatc cgtcatttcc aggagcggga ctggacccgc gaaggccggc
     1141 cccgcgcccc ggtgattcca ccgggcagcc ctattggcac cgacagataa tcatggagcg
     1201 attgtccgat tcatcgattg aacgattact tcttgcggag atccgaacat gcgccggttt
     1261 ttcctcacct gctccattct cgccgcgctg cctttggcag cggtcgttgc ccaggaaacg
     1321 acgctgccgc caaccgccaa gacgggagac gtctcctcgg tcgacgccat catggcagcg
     1381 atctatgatg tgatctcggg gccggccggc cagaagcgtg actgggaccg gatgcggtcg
     1441 ttgttcgtcc ccggggctcg gctgatcccg accggacggg gcgccgacgg caagcggcgg
     1501 gccatcgtct ggacggtgga ggattacatc aagaactcgg ggccgcgtct ggaagagatg
     1561 ggcttcttcg agaaggaaat cggccgggtg caggagcagt acggcagcat cgtgcatctg
     1621 atgtcggcct acgattcgcg ccgcactgcc gatgacgcca cccccttcgc ccgcggggtc
     1681 aacagcttcc agct
//
LOCUS       DASWKS010000595        12982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_309958, whole genome shotgun sequence.
ACCESSION   DASWKS010000595 DASWKS010000000
VERSION     DASWKS010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12982
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309958"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1311)
                     /locus_tag="VGA78_16990"
     CDS             complement(<1..1311)
                     /locus_tag="VGA78_16990"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9895630.1"
                     /translation="MSEAPPISKAYGIYALSLLTLINVVNYLERNVIFALFEPIKRDL
                     QLSDAHLGWLGTAYVLVFSIAALPVGVLSDLRSRTSMTAFGVAVWSAFTSFGGLVRSF
                     GQLLVCRAAVGLGGAAANAAGTALVADYFRGPGRAAAMSIFTAGLALGGVLGILAAGQ
                     LEALYGWRVAFMTLGLPGFGLALLVARLRDPLHWGALRPVLTQLRDLGLGVKELVRRA
                     LPLILGLILGAGAAWWADRRYGADSALDAAVFSLVAGLGLAWNILLWVRRARRQSRAE
                     GQRVAAGVQNALNELIDGFHTVVRTPTLVWVFVGGAMISFGMNGIIGWAPAFMTRELG
                     LTVARASLLLGKWGLIFGIAGTLTGGLLADWLQRRYPWARVVVSSIGFLLGGPLAIWL
                     LTIRDLSLFIPVFCGAFFFLTWYNGPLTSVIFDVTPQRISTTVAG"
     gene            complement(1308..2444)
                     /gene="speY"
                     /locus_tag="VGA78_16995"
     CDS             complement(1308..2444)
                     /gene="speY"
                     /locus_tag="VGA78_16995"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: protein motif:HMM:NF001980.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HEX9895631.1"
                     /translation="MTRPSASFLRGTRIAPPPITGKETVADLIDRAFLAYNAGRLREG
                     CVLFTERMLQPEVTVGLSLTGAMTPAGLGMSTLIPLMQAGFVDWIISTGANLYHDAHF
                     ALGLAMHQGTPFADDVELREHGVVRIYDVFFDYSVLLSTDAFVREVSAHEAFQRPMST
                     AEYHYLLGGYLLERENAVGAARQSVLAAAHELEVPIYTSSPGDSSIGMNVAEQALAGS
                     RLRFDVSADVNETAAIVLEAKRSGGRSGALIAGGGSPKNFLLQTEPQIQEVLGIDERG
                     HDYFLQLTDARPDTGGLSGATPGEAVSWGKIDPDMLPGTVVCYMDNTVSLPLLTAYAL
                     ARHAPRPLKRLYRRREVMMDRLLTEYRSALEFRNQRALESRAGA"
     gene            2508..2804
                     /locus_tag="VGA78_17000"
     CDS             2508..2804
                     /locus_tag="VGA78_17000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895632.1"
                     /translation="MPDRAATEPGSSGPSSWGGLVLALVLRAAVNPRLAVDLVRTGWA
                     FRRRGWWRLPPYLPLPDGPYLRWRMYTAYGDEQAIPPVEDVISFARWRRETMHL"
     gene            2801..4063
                     /locus_tag="VGA78_17005"
     CDS             2801..4063
                     /locus_tag="VGA78_17005"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9895633.1"
                     /translation="MTDRPHVVIVGGGFAGLEAAKKLGRMPVRVTMVDRANHHTFQPL
                     LYQVATAALNAGEIAKPIRSVLRRYPNLSVLLGNVTRVDVAARSLELADGAVVHYDYL
                     ILAPGVRHSYFTRPEWEALAPGLKTIEDALEIRRRVLLAFERAERSESSDERHRLLTF
                     VVVGGGPTGVEVAGAIAEIRRYALARDFRHIDPRDATVLLLEGGPRVMPSYPAELSQK
                     AKESLRRLGVDVRTDSMVTSLEPGAVISAGWTIPTETVVWAAGNAASPLLQTLGVPLD
                     GAGRPIVEADCSIPGHREVFVLGDAAAFRHDPKYPVVLPGVAPVAMQQGRYAARAIAA
                     DLRKQERIPFKYVDKGQLAVIGRGQGVADIGPFHIAGLLAWLAWIFIHILYLIGFANR
                     IVVMFRWAVSYLTFERGARLITREWKAG"
     gene            4201..5142
                     /gene="queG"
                     /locus_tag="VGA78_17010"
     CDS             4201..5142
                     /gene="queG"
                     /locus_tag="VGA78_17010"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEX9895634.1"
                     /translation="MVTALEVKAWANELGFVACGIAHLEPNRHGDALDDWLARGYAGT
                     MRYLHRQARQRKAPGLIVPEARVAVVVLENYLPSHHSVRPSVRPSVKLAKYAQGEDYH
                     RALIRRLDQLAARLLQGGARVARPYADAGPVPERELAQRAGLGWIGKNTMLIRPAAGS
                     FVFIGSVFTDLALAPDAPFDLDRCGSCTRCLDACPTDAFAGPRVLDANRCLSYLTIEW
                     RGDIPTEPAARSEGWAFGCDICNDVCPWNQQFARPSERPEYQPRAIPPLDDPGFFDRL
                     TEEQFARQFGDTPLERPGLAGMQRNWRMAFAAVDSKQ"
     gene            5153..5749
                     /locus_tag="VGA78_17015"
     CDS             5153..5749
                     /locus_tag="VGA78_17015"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX9895635.1"
                     /translation="MNSEQLPALVRGLQPAIRTPRLVIRPFVPEDAPAVQALVQERQV
                     ADTTLNIPHPYPDGGAASWIATHGPRFAAGEDAVFAVTSGADGLVGAIGLSLSPAHRR
                     GELGYWIGLPFWNLGYATEAAAAVLWYGFECLVLNRIQATHFSRNPASGRVMQKVGMS
                     HEGRSAQYLMKWGRLEDIERYAILRSGYGGPPWPVEMR"
     gene            5746..6087
                     /locus_tag="VGA78_17020"
     CDS             5746..6087
                     /locus_tag="VGA78_17020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895636.1"
                     /translation="MIRAEAFERARERLLPVWRSHGFKLASVERSERDSENAYAEYFR
                     RGVRLRLVWEANEPALWIESAREIDAQIVSRWTDIEWSLAGSPLPLDTEVSTERVERL
                     ATALERFLTAP"
     gene            complement(6084..6875)
                     /locus_tag="VGA78_17025"
     CDS             complement(6084..6875)
                     /locus_tag="VGA78_17025"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895637.1"
                     /translation="MRLLLLLSALQGPGSGPVLIANTTVVDVQNGLAVSGRSILVRDG
                     RIVEVGPAGGATPPGTRIIDGQGKYLIPGLWDMHVHAAFPQLDQLFLPLLLANGVTGV
                     REMWSQLSWIDASRARVRRGELAGPRIYGAGNLVDGVPPIWPGSMGVAGPDEGRRAVD
                     SLTRHGAGFIKVYRRLAPETYRAIAAEAATIEPARFLGAADSMGTGALGKVADLVLLD
                     ANPLESIRNTARIAAVISGGRVYQRPALDSLLAAGRERARSAAGR"
     gene            6944..7531
                     /locus_tag="VGA78_17030"
     CDS             6944..7531
                     /locus_tag="VGA78_17030"
                     /inference="COORDINATES: protein motif:HMM:NF009205.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX9895638.1"
                     /translation="MQSNGPVAELRPGANDPVVERLLRARTIIISGEINQKLAATVMG
                     QLLAMASESEDDITIYINSQGGHVEAGDTIHDMIRFVTPRVKMVGTGWVASAGALIYV
                     AVPREQRFCLPNTRFLLHQPAGGSGGSASDIEIEAREILRMRDRLNRIFARETGQPLE
                     RIEEDTHRNFWLDAEAAVKYGIAGKIIQNATELAR"
     gene            complement(7601..9082)
                     /locus_tag="VGA78_17035"
     CDS             complement(7601..9082)
                     /locus_tag="VGA78_17035"
                     /inference="COORDINATES: protein motif:HMM:NF006596.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9895639.1"
                     /translation="MAFNKAVEAGRRQSKAVECGPTASTVFDRLRLSSTLAAFLVTVG
                     TPATAQVPRSAWDSLARDLLRELIEINTTQSTGSTTAAAQAMARRLEAAGFPDSDVVV
                     IETAPRKGNLIARLRGRSSGRKPILLLSHIDVVEARAEDWTLPPFQFVEREGTFYGRG
                     VADDKDEGAIHLSLIMRLKAERFVPERDIVVALTADEEGGPANGVEWLLQNRRDLIDA
                     EWVFNEGGGGRVRDHAKLSHDVQASEKKVQDFRLEVTNPGGHSSIPVRDNAITHLSDA
                     LVKLGAYDFPVRLNDVTRMYFTRLAGISEGERGSAMRAIVANPADQAAARILSADPRY
                     NSQLRTTCVATMLEGGHARNALPQRARANVNCRILPDESPDEVRRTLEQVMANPKVTI
                     TPVGAARNSPPSPLTPQLMTEIERITKEMWGNLPVIPTMSTGATDGLYLRNAGIPVYG
                     VSGLFYPETGAHGMNERVPAQAFYEGLEFMYRLVRSLTRPGTT"
     gene            9081..9455
                     /locus_tag="VGA78_17040"
     CDS             9081..9455
                     /locus_tag="VGA78_17040"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9895640.1"
                     /translation="MEISLYSAAIFVEHIDRAVEFYRDALGLPLRSQGSFGAEFLEGE
                     ARIGVHPAVHSDAKALVGRHTGLTLRVGGLLHYCGDLHARGVRFVAEPTQQSWGVMAL
                     IADPDGNVLALWEPSPGAPGEG"
     gene            9537..10925
                     /locus_tag="VGA78_17045"
     CDS             9537..10925
                     /locus_tag="VGA78_17045"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895641.1"
                     /translation="MTRLSCFSLLVGSLAACTGSAASPSRGASPERAAMLARIDSIVN
                     APIAAGKVAGASVAVVKGSDTLLMRGYGKADLELDVATPPDAVYEIGSVTKQFTATAI
                     MQLVEQGKLSLDDDLSQYLPDYPARGNKIALRRLLDHTSGIKGYTEIPEFGSLRMQKL
                     PRDTLVKIFSRYPFDFPPGEAEIYNNSAYFLAGLIIEKVSGMSYADYVQKNLFDKVGM
                     TNSRYCSENAVVPRRAHGYDAADSTGRLVRAAYLDHTWPYAAGSLCSTVGDLVKWNQA
                     LHGGRVLSPEAYAELITPGTLNDGTTLRYAKGLALVPQAGRRAIWHDGGINGFISLNR
                     YLPDESLSVVVLWNSTGGDLDVGEAIIGAVLGDAPAGTASFDGALEDYVGTWSGRGRG
                     RPMEVVLAADSGRLTLKQGREDPEPLTFVGDDTWQNGSTVLKFERTNGKPSRLRFDAG
                     YLYVQLTRKATS"
     gene            complement(10927..11823)
                     /locus_tag="VGA78_17050"
     CDS             complement(10927..11823)
                     /locus_tag="VGA78_17050"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9895642.1"
                     /translation="MRVVSLLPAATEIVTALGGQGSLVGISHQCDWPPAIRGLPRVTS
                     TPIDIGAGSGAIDRTVRDLREQGQAVIAVDGRRLRQLAPDLIITQHLCEVCAVADGQV
                     HRIADLMDPSPSVLALEANDLAGVFEDIQRVGDALELAPEAVELAAGLRYRLERLRWT
                     APSPPPNVLCIEWLDPFYLAGHWVPDLVAAAGGSDIGARPGQPSRRLDREELQALRPD
                     VVVVMLCGFGLERAAQELERSPLPSLGAPVWLLDGSAYTSRAGPRVVDGATLLQAAFR
                     GDRSGSSPALRRVPATDDRARG"
     gene            11871..>12982
                     /locus_tag="VGA78_17055"
     CDS             11871..>12982
                     /locus_tag="VGA78_17055"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9895643.1"
                     /translation="MPSPTARRTHRFTESVIRGMTRLAQQHDAINLAQGFPNFPTPDL
                     LKQAAARAIAADINQYAITWGAQRLREALAARYRDWYGMTVDPQAHLTVTCGATEAMA
                     ATLLAIVDPGDEVVVMEPFYENYGPDAILCEAKPVYVPLQPGDPLDLDRLAAAFNART
                     RAIVVNTPNNPAGRVLTRAELEGIATLCQRHDAYAVTDEIYEHIRYDGVHIPIATLPG
                     MENRTITISGGSKTFSITGWRIGWIVAPAALNDAIRKVHDFLTVGAPAPLQEAVAVAL
                     EQLPPSYYSDMALAYRRRRDILVTALQEAGFRCIAPEGAYYVLSDFSGLSDLSDTEFS
                     RWLTADIGVAPVPGSSFFSEPELGHTLVRFAFCKTD"
BASE COUNT         2176 a         4388 c         4341 g         2077 t
ORIGIN      
        1 cccggccacc gtggtgctga tccgctgcgg ggtgacgtcg aagatcaccg acgtgagcgg
       61 gccgttgtac caggtcagaa agaagaaggc gccgcagaac accgggatga acagggacag
      121 atcgcggatc gtaaggagcc agatggccag cgggccgccc agcagaaacc cgatggacga
      181 caccaccacc cgggcccagg gatagcgccg ctgcagccag tcggcgagca gaccaccggt
      241 cagcgtgccg gcgatcccga agatcagccc ccacttcccc agcagcaacg aggcccgcgc
      301 caccgtgagg ccgagctccc gggtcatgaa ggctggggcc caaccgatga tgccgttcat
      361 gccgaacgag atcatagcgc cgcccacaaa cacccacacc agggtgggcg tccgcaccac
      421 ggtatggaat ccgtcgatca gctcgttgag cgcgttctgc actcccgcag ccacccgttg
      481 gccctcggct cggctctgcc gccgggcccg ccgaacccag agcaggatgt tccaggcgag
      541 cccgagacct gccaccagcg agaacactgc ggcatcgagc gcggaatcgg ccccgtaccg
      601 gcggtcggcc caccacgccg cgccggctcc caggatcagc ccgagaatca gggggagcgc
      661 gcgccgtacc agctctttga cgccgagccc caggtcacgc agttgggtga gcaccggccg
      721 gagcgcgccc cagtgcagcg gatcgcgtag ccgggcgacc aggagcgcca ggccgaagcc
      781 gggcagcccc agcgtcatga acgccacccg ccagccatac agtgcttcca gctggcccgc
      841 agcgagaatc cccagcacgc cgcccagcgc cagtccggcg gtgaagatgc tcatggcggc
      901 ggcgcgcccg gggccccgga aatagtccgc caccagcgcg gtgccggccg cgttggccgc
      961 cgcgccaccc aggccgaccg cggcccggca gaccaggagc tgcccgaaac tccggaccag
     1021 gcccccgaaa ctggtgaacg cgctccagac cgcgactccg aacgcggtca tgctggtccg
     1081 cgatcgcagg tcggaaagca ccccgaccgg aagagcggcg atggaaaaca ccaggacata
     1141 cgccgtcccg agccagccca ggtgcgcgtc ggaaagctgg agatcgcgct tgatcggctc
     1201 gaacagcgcg aagatgacat tgcgttcgag atagttgacg acgttgatga gcgtaagcag
     1261 cgacagcgcg tagatgccgt acgctttgga gatcgggggg gcctcgctca cgcgccggcc
     1321 cgggactcca gcgcccgctg gttccggaac tcgagggcgg agcgatactc agtgagcagg
     1381 cggtccatca tcacctcgcg ccggcgatac aaccgcttga gcggccgggg ggcgtgacgg
     1441 gcgagcgcat aggcggtgag caacggcaga ctcacggtgt tgtccatata gcagaccacg
     1501 gtgcccggca gcatgtcggg atcgatcttg ccccacgaaa ccgcttcgcc cggcgtggcc
     1561 cccgacagtc cgccggtatc gggccgcgcg tcggtgagct gcaggaagta gtcgtgcccc
     1621 cgctcatcga tccccaggac ttcctggatc tggggctccg tctggagcag gaaattcttg
     1681 ggactgccgc ctcccgcaat cagcgccccg ctcctgccgc cgctgcgttt ggcttccagc
     1741 acgatggccg ccgtctcgtt cacatcagcg ctcacgtcga accggagccg gctcccggcc
     1801 agcgcctgct cggccacgtt catgccgatg gaactgtctc cgggcgagct ggtgtagatc
     1861 gggacctcca gctcgtgggc cgcggccagc accgactgcc gggcggcccc cacggcgttc
     1921 tcccgttcca gcagatagcc gcccaggaga tagtggtact ccgccgtgct catcggccgc
     1981 tggaacgcct cgtgggccga gacctcccgc acgaacgcgt cggtggagag caggacgctg
     2041 tagtcgaaga acacatcgta gatccgcacc accccgtgtt cgcgcaattc gacgtcgtcg
     2101 gcgaacggcg tgccctgatg catcgccagg cccagagcga agtgggcatc gtggtacaga
     2161 ttggcgccgg tggagataat ccagtccaca aagccggcct gcatcagcgg gatcagcgtg
     2221 ctcatgccca gtcccgccgg agtcatggcg cccgtcagac tcaagccgac ggtgacctcg
     2281 ggttgcagca tccgctcggt gaacaacaca cacccctcgc gcagccggcc ggcattgtac
     2341 gccaggaagg cgcgatcgat caggtcggcc acggtttcct tgcccgtgat ggggggcggc
     2401 gcaatgcggg ttccgcggag gaaactggcc gaggggcgcg tcatctgaag tccgggagca
     2461 gggcacggga atatagtggt ccccgcgcta tcttactggc gctcaatatg ccagaccgcg
     2521 ccgccaccga gccgggttcc tccggcccca gcagctgggg cgggttggtg ctcgcgctcg
     2581 tcctgcgggc ggcggtgaat ccccgcctgg cggtcgacct ggttcgcacc gggtgggcct
     2641 tccggcgtcg cggctggtgg cgcctccctc cctacctccc ccttcccgat ggtccctatc
     2701 tccggtggcg aatgtacacc gcctatggcg atgaacaggc cattccgccg gtggaggacg
     2761 tgatttcgtt cgcgcgctgg cgccgggaga ccatgcacct atgaccgatc gcccccatgt
     2821 ggtgatcgtg ggaggaggct tcgccgggct ggaggccgcc aagaagctgg gccgcatgcc
     2881 ggtgcgggtg accatggtgg accgggccaa ccaccacacg ttccaacccc tgctctatca
     2941 ggtcgccacc gcggcgctca atgccggcga gattgccaag ccgatccgct cggtgctgcg
     3001 gcgatacccc aacctctcgg tcttgctggg caatgtgaca cgggtcgacg tggccgcgcg
     3061 gagcctcgag ctggccgacg gggctgtcgt ccactacgac tatctcattc tggcgcccgg
     3121 tgtgaggcat tcctatttca cacgcccgga gtgggaagcg ctggctccgg gtctcaagac
     3181 catcgaggac gcgctcgaga tccgccgccg ggtgctgctg gcgttcgagc gggccgagcg
     3241 atcggagtca tccgatgaac ggcaccggtt gctgaccttc gtggtcgtcg gtgggggtcc
     3301 aaccggggtc gaggtggctg gagccatcgc cgagatccgc cgttacgccc tggcccgtga
     3361 tttccgccac atcgacccgc gcgacgcgac ggtcctgctt ctggaaggcg ggccccgggt
     3421 catgccgagc tatccggctg agctgagtca gaaggccaag gagtctcttc gccgcctcgg
     3481 ggtggacgtc cgcaccgact ccatggtcac ttcgctcgaa cccggagccg tgatctcggc
     3541 cggatggact atccctaccg aaaccgtggt ctgggccgcg ggcaacgccg cgagtccgct
     3601 gctccagacg ctgggtgtac ccctggatgg ggccggccgg cccatcgtgg aggccgactg
     3661 ctctattccg ggccatcgcg aagttttcgt cctgggtgat gcagccgcat tccgccacga
     3721 cccgaagtac ccggtggtat tgcccggggt ggcgccggtg gccatgcagc agggtcgcta
     3781 cgcggcccgt gccattgcag ccgacctgcg gaagcaggaa cggattccgt tcaagtacgt
     3841 cgacaagggc caactggccg taatcgggcg aggccagggc gtcgctgata tcgggccgtt
     3901 ccatattgcc gggctgctgg cgtggctggc ctggatcttc attcacatac tgtatctgat
     3961 cgggttcgcc aaccggatcg tggtgatgtt ccgctgggcg gtatcgtacc tgacgttcga
     4021 acgaggcgcg cggctgatca cccgggagtg gaaggcgggg tagggaatgc agaatgccca
     4081 gtgccgaatg cccaatgcag aggggtaggg tagaggggag acctctgctg tgggcactgg
     4141 gcattgggca ttctgcattc actcgaacct ccgccctcaa ccattggttt accttcaaga
     4201 atggtcaccg cccttgaggt gaaagcatgg gccaatgagc tgggattcgt ggcatgcggg
     4261 atcgcccacc tcgagccgaa ccgccatggg gacgccctgg acgactggct ggcccggggc
     4321 tacgcgggca ccatgcggta cctgcatcga caggcccgcc agcgaaaggc gccgggcctg
     4381 atcgttccgg aagcccgggt ggccgtggtt gtgctggaga actacttgcc gtcacatcac
     4441 tcagtccgtc cgtccgtccg tccttccgtt aagctcgcga agtacgccca gggtgaggac
     4501 tatcaccggg ccctcatccg gcggctggac cagctggccg cgcggctgtt gcagggtggt
     4561 gcccgggtcg cccgtcccta tgccgatgcc gggccggtgc cggaacggga gctggcccag
     4621 cgcgccggcc tgggctggat cggcaagaac accatgctca tccgacccgc cgccggctcg
     4681 ttcgtgttta tcggctcggt ctttaccgac ctggcgttgg cgccggatgc tccctttgac
     4741 ctggaccgct gcggcagttg tacccggtgc ctcgatgcct gtcccacgga cgcgttcgcc
     4801 gggccccggg tactggatgc gaatcggtgt ctgtcctacc tcaccatcga gtggcggggc
     4861 gacattccga cggagcccgc ggcccgatcg gaaggctggg ccttcggctg cgacatctgc
     4921 aacgacgtgt gtccctggaa ccagcagttc gcccgcccca gcgagcggcc ggaataccag
     4981 ccccgggcga taccgccact ggacgatccc gggttcttcg accgccttac cgaggaacaa
     5041 ttcgcccggc agttcgggga tacgccgctc gagcgaccgg ggttggcggg aatgcagcgc
     5101 aactggagaa tggcgttcgc cgcagtagac agtaaacagt gagctgtgaa cagtgaacag
     5161 tgaacagctg ccggcactcg tgagaggact ccagccggcg attcgcactc cccggctggt
     5221 gatccggccg ttcgtgccgg aggatgcgcc cgcggtgcag gcactggttc aggagcggca
     5281 ggtggcggat accacgctca acattcccca cccttacccc gacggcggcg cggcctcctg
     5341 gatcgcaacc cacggccccc gtttcgccgc gggtgaagac gcggtgttcg ccgttaccag
     5401 cggggccgat ggcctggtgg gggccatcgg cctcagcctg tcgccggccc atcggcgggg
     5461 ggaactgggt tactggatcg ggctgccgtt ctggaacctc ggctatgcca ccgaagccgc
     5521 cgcggccgtg ctatggtatg ggttcgaatg cctggtcctc aaccggatcc aggccactca
     5581 cttcagccgc aatccggcct ccggccgggt gatgcagaag gtcggcatga gccatgaagg
     5641 gcgctcggcc caatacctga tgaaatgggg ccgcctcgag gatatcgaac gctacgccat
     5701 tctgaggtcg ggatatggcg ggccgccctg gccggtcgag atgcgatgat ccgggccgag
     5761 gcctttgagc gggcgcggga gcgactgctt ccggtgtggc gttcgcacgg attcaagctg
     5821 gcgtcggtcg aacgatcgga gcgggacagt gagaacgcct acgccgagta cttccgccgc
     5881 ggagtccggc tgcgactggt gtgggaagcg aacgagcccg ccctctggat cgaatcggcc
     5941 cgggaaatcg acgcccagat cgtcagccgc tggaccgaca tcgaatggag cctggccggg
     6001 tcgcccctgc cgctcgatac cgaagtgagc accgaacgag tcgaacggtt ggctacggcg
     6061 ctggagcgat tcttgaccgc gccctaacga ccggcggcgc tccgggcgcg ctcccgcccc
     6121 gccgccagca gggaatcgag tgccggccgt tggtagaccc gccctccaga tatcaccgcc
     6181 gcaatccgcg ccgtgttccg gatgctctcg agcgggttgg cgtccagcaa caccagatcc
     6241 gccaccttgc ccaaagcgcc cgtccccatc gagtccgccg cgccaaggaa ccgggccggt
     6301 tcgatggtgg ccgcctcggc cgcgatggcg cgataggtct ccggcgccag gcgacggtag
     6361 accttgatga agcccgctcc gtgccgagtc agggagtcga cggctcggcg gccctcgtcg
     6421 ggaccagcca cccccatcga tcccggccag atgggcggaa cgccatccac caggttcccc
     6481 gctccataga ttcgggggcc ggccaactcg ccccggcgga cccgggcccg gctcgcatcg
     6541 atccacgaga gctgactcca catctcccga accccggtga cgccgttcgc cagcaacagc
     6601 ggcaggaaga gctggtccaa ttggggaaag gcggcatgga cgtgcatgtc ccagaggccc
     6661 ggaatcaggt acttgccttg gccgtcgatg atccgggttc ccggcggtgt cgcccctccg
     6721 gccggcccga cctcgacgat tctcccgtcc cgtaccagga tcgagcggcc cgacacagcc
     6781 aggccgtttt gcacgtcgac caccgtggtg ttggcaatga gcaccgggcc ggacccgggg
     6841 ccctggaggg cggaaagcag aaggaggagg cgcattactg aaactacagt gcttgggact
     6901 aggactgtat tattctgtcc ccatgaacga cccggagagc cccatgcagt ccaatggccc
     6961 cgtcgcggaa cttcgccccg gagcgaacga ccctgttgtc gagcggttgc tgcgggcccg
     7021 caccatcatc atcagtggcg agatcaacca gaaactggcc gccacggtga tgggccaact
     7081 cctggccatg gcctccgagt cggaggacga catcaccatc tacatcaact cccagggcgg
     7141 tcacgtcgag gccggcgaca ccatccacga catgatccgc ttcgtaacgc cccgggtgaa
     7201 gatggtcgga accggatggg tcgcgagcgc cggcgcgctc atctacgtgg cggtgccgcg
     7261 ggagcagcgc ttctgcctgc ccaatacccg gttcctgctg caccagcccg ccggcggcag
     7321 cggcggctcc gccagcgaca tcgaaatcga ggcccgcgag atcctgcgta tgcgcgaccg
     7381 gctcaaccgg atcttcgccc gcgagacggg ccaaccgctg gagcggatcg aggaggatac
     7441 ccaccgcaac ttctggctcg acgccgaggc cgcggtgaag tacggaatcg ccggcaagat
     7501 cattcagaac gccaccgaac tggcacggta acaaggcggg gagagggaag gcgggagggg
     7561 ggagacgggg gtcgcgttcc gctcccgtct ccccgccttg ttaggtcgtt cccggcctgg
     7621 tcaagctccg aaccagccga tacatgaact ccagcccttc atagaacgct tgcgccggga
     7681 cccgctcgtt catcccgtgc gccccggttt cggggtagaa caaacccgag actccataca
     7741 ccggaatgcc ggcattgcgg aggtacagcc cgtcggttgc gccggtgctc atggtaggaa
     7801 tcaccggcag attgccccac atctccttgg tgatccgctc gatctccgtc atcagctgcg
     7861 gagtgagagg ggagggcggt gagtttcgcg ccgcccctac cggcgtgatg gtcaccttgg
     7921 ggttcgccat gacctgctcc agggtgcggc gcacctcgtc gggggactca tccggcagga
     7981 tccggcagtt cacgttggcc cgggcccgct gcggcagggc gttccgggcg tgtccaccct
     8041 cgagcatggt ggcgacgcaa gtggttcgga gctgcgaatt gtagcgggga tcggccgaga
     8101 gaatccgggc cgctgcctgg tccgccggat tggcgacgat cgcgcgcatc gcggatcccc
     8161 gctcgccctc gctgatgccg gccagtcggg tgaagtacat ccgggtgaca tcgttgagcc
     8221 ggaccggaaa gtcgtatgct cccagcttta ccagagcgtc cgacagatga gtgatcgcgt
     8281 tgtcccgcac cgggatcgag ctgtggcccc ccggattggt cacctcgagc ctgaagtcct
     8341 ggaccttctt ctcgctcgcc tggacgtcgt gtgacagttt ggcatggtcg cggacccgac
     8401 cgccgccgcc ctcgttgaac acccattcgg cgtcgatcag gtcgcggcga ttctggagca
     8461 gccactcgac cccattggcg gggccaccct cttcgtccgc ggtgagcgcc accacgatgt
     8521 cgcgctcggg aacgaaccgc tcggccttga gccgcatgat cagcgacaga tggatcgcgc
     8581 cttcgtcctt gtcgtcggcc acgccccggc cgtagaaggt tccttcccgt tcgacgaact
     8641 ggaacggcgg cagggtccag tcctcggccc gggcctcgac tacgtcgatg tgcgacagca
     8701 gcagaatggg cttccggccg ctgctccggc cccgcagccg ggcaatcagg ttgcccttcc
     8761 ggggtgcggt ctcgatgacc acgacgtcgg aatcgggaaa ccccgccgcc tcgagccgcc
     8821 gggccatagc ctgggccgcg gccgtggtgc tgccggtgct ctgggtggta ttgatctcga
     8881 tgagctcgcg caggagatcg cgggccagcg aatcccacgc cgagcgcggg acctgggcgg
     8941 tggccggggt ccccaccgtg accaggaacg ctgcaagggt cgaagacagt cgaagacggt
     9001 cgaagacggt cgaagcggtg ggaccgcatt cgaccgcttt cgactgcctt cgaccggctt
     9061 cgaccgcttt attgaatgcc atggagatct ccttatacag tgccgccatt ttcgtcgagc
     9121 acatcgatcg ggccgtggaa ttctaccgcg atgcgctggg tctgccactc cggagccagg
     9181 ggagtttcgg cgccgagttc ctggaaggag aagcccggat cggagtgcat cccgcggtgc
     9241 actccgacgc caaggccctg gtcggccgtc acaccgggtt gaccctccgg gtcggggggc
     9301 tgctccatta ttgcggcgac ctgcatgccc ggggggtccg gttcgtggcc gagccgaccc
     9361 agcagtcgtg gggcgtcatg gcgctgatcg cggaccccga cggcaatgta ctggctctct
     9421 gggagccgtc gccgggagcg ccgggcgagg gctaagcgcg agccggcgcc cttgcgcccg
     9481 gggccggatt gtatacaatg cggagcaccc gtcttccccc ccagctggag taccccgtga
     9541 cccgattgtc ctgcttctcg ttgctggttg gctcgctcgc ggcctgcacc gggagcgccg
     9601 cctcgccgtc ccgcggcgcc tcgcccgagc gggccgcgat gctcgctcga atcgactcca
     9661 tcgtcaacgc gcccatcgcg gccggcaaag tcgccggggc ttcggtcgcg gtggtcaagg
     9721 ggagcgacac gctcctcatg cgggggtacg gcaaagctga tctggagctc gatgtcgcca
     9781 cgccgcccga tgcggtgtac gagatcggat cggtgaccaa gcagttcacc gccacggcga
     9841 tcatgcagct ggtggagcag ggcaagctgt cgctggacga cgacctctcc caatacctcc
     9901 ccgactatcc cgcccgggga aacaagatcg ctctgcgccg gctgctggat cacacctccg
     9961 gcatcaaggg ctacaccgag atcccggagt tcgggagcct gcggatgcag aaactgccgc
    10021 gcgacactct ggtcaagatc ttcagccgtt acccgttcga cttccctccc ggtgaggccg
    10081 agatctacaa caactcggcc tatttcctgg cgggcctgat catcgaaaag gtcagcggga
    10141 tgtcctacgc cgactacgtg cagaagaacc tgttcgataa agtcggcatg accaactccc
    10201 gctattgcag cgagaacgcg gtggtgccgc gccgggccca tgggtacgat gccgctgatt
    10261 cgaccggccg gctggtccgg gccgcgtacc tggatcacac ctggccctac gccgccggct
    10321 cgctctgctc cacggtgggc gatctggtga agtggaatca ggcgctgcat ggcggccggg
    10381 tgctgtcgcc tgaggcctac gccgagttga tcaccccggg aaccctgaac gacgggacca
    10441 cgctgcggta cgccaaggga ctggctctgg tgccgcaagc cgggcgcaga gcgatctggc
    10501 atgatggcgg catcaacggg ttcatctccc tcaaccgcta cctcccggat gagtcgctga
    10561 gcgtggtggt gttgtggaac tcgaccggtg gggacctgga cgtcggggag gcgatcatcg
    10621 gggcggttct gggcgacgca ccggccggca ccgcgtcctt cgacggcgcg ctggaagact
    10681 atgtcggaac ctggtccggg cggggtcggg gacgtccgat ggaagtggtg cttgcggcgg
    10741 acagcggccg cctcacgctg aagcagggcc gggaggaccc ggagccgctg acgttcgtgg
    10801 gcgacgatac ctggcaaaac ggcagcacgg tcttgaagtt cgagcgcacc aacgggaaac
    10861 ccagccggct gcggttcgat gccggctatc tctacgtgca gctgacccgg aaagcgacga
    10921 gctgactcaa ccgcgggctc ggtcgtcagt cgcaggcacc cgtctcaggg ccggcgacga
    10981 accgctgcgg tcaccgcgaa acgctgcctg caacagcgtg gccccatcga ccacgcgggg
    11041 accggcgcgc gaggtgtatg cgcttccatc cagcagccag accggtgccc cgagcgaggg
    11101 aagcggactg cgttcgagct cctgcgcggc gcgctccagt ccaaagccac acagcatcac
    11161 gaccaccaca tcgggtcgta aggcctgcag ctcctcccgg tccagccggc gcgatggctg
    11221 gccgggccgg gcgccgatgt cgctgccacc ggcggcggcg accaggtcag gaacccaatg
    11281 gcccgccagg tagaacgggt ccaaccattc aatacagagg acgtttggtg gcggtgaggg
    11341 cgctgtccag cgcagccgct cgagccggta cctgagccca gccgccagct ctacggcttc
    11401 aggcgcgagc tcgagcgcgt cccccacccg ctgaatatcc tcgaacacgc ccgcgaggtc
    11461 gttcgcctcc agcgccagca cgctgggcga tgggtccatc agatcggcga tccggtgcac
    11521 ctgaccgtcg gcgacggcgc agacctcgca caagtgctgg gtgatgatca gatcgggggc
    11581 cagctggcgc agcctgcggc cgtccaccgc gatgacggcc tgaccctgct cccgcaggtc
    11641 ccggaccgtc cggtcgatcg cgccgctccc cgctccgatg tcgatggggg tcgaagtgac
    11701 ccggggcaag ccccggatcg cgggaggcca gtcgcattgg tgcgagatcc cgaccagtga
    11761 gccttggccg cccaacgcgg tgacgatttc ggttgccgcg gggagcagag aaaccacccg
    11821 catcattgcg acgctcgacg gcggaacggg agaggatgat agttttaggc atgccctctc
    11881 cgacagcccg ccgtactcac cgcttcaccg agtcggtcat ccgcgggatg acccggctcg
    11941 cccagcaaca cgacgcgatc aacctggcgc agggattccc gaacttcccg accccggatc
    12001 tcctcaagca agccgcggct cgggcgatcg ctgccgatat caaccagtat gccatcacct
    12061 ggggagcgca gcgcctgcgg gaggcgctgg ccgcccgcta tcgtgactgg tatgggatga
    12121 cggtggatcc tcaggcccac ttgaccgtga cgtgcggcgc cacggaggcc atggcggcga
    12181 ccttgctcgc catcgtcgac ccgggtgatg aagtcgtggt gatggagccc ttctacgaga
    12241 actacggacc cgacgccatc ctgtgcgagg cgaagccggt gtacgtgccg ctccagccgg
    12301 gcgatccgct ggacctcgac cggctggcgg ccgcgttcaa cgcccgcacc cgcgccatcg
    12361 tggtcaatac cccgaacaac ccggccggcc gggtcttgac ccgggccgag ctggaaggga
    12421 tcgcgacgct gtgtcagcgg cacgatgcgt acgctgtgac cgacgagatc tacgagcaca
    12481 tccggtatga cggcgtgcac attcccatcg cgacgctgcc cgggatggag aaccggacca
    12541 tcactatcag cggcggctcc aagacgttca gcatcaccgg ctggcgaatc ggctggatcg
    12601 tggccccagc ggccctgaat gacgccattc ggaaagtcca cgatttcctc accgtgggtg
    12661 cgccggcgcc gttgcaggag gcggtcgccg tggcgctgga gcagttgccg ccgtcctact
    12721 acagcgacat ggcgctggcg tatcgccggc gccgggacat cctggtgacg gcgctccagg
    12781 aggcgggctt ccggtgcatc gcaccggaag gcgcctacta cgtgctgtcc gacttttccg
    12841 gcctgtccga tctctccgac accgagttca gtcgctggct cacggcggac atcggggtcg
    12901 cccccgtgcc cggttcgagc ttcttcagcg agccggagct gggtcacacc ctggtgcggt
    12961 tcgccttctg caagacggac ga
//
LOCUS       DASWKS010000596         8790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3615666, whole genome shotgun sequence.
ACCESSION   DASWKS010000596 DASWKS010000000
VERSION     DASWKS010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8790
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3615666"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VGA78_17060"
     CDS             <1..957
                     /locus_tag="VGA78_17060"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9895644.1"
                     /translation="QLQWTRSDDLAHDMYQSSQLNRMTAGLDPSGLPIAWMHQVGDFH
                     LTMFGPYNPQFDPTADGDPWGGFDTPYDFPALQVDLALIESPVPTGAWRSVTYPPAVM
                     ARECFLDEIAHATGRDPVELRLALLPSPGRIKYGSGQLDNGDRLRAVLSLAAERSGWS
                     SPFLRERQGRRWGRGIACNSYHQGTMVAQVAEVSVGPAGDVKVHRVVCAVDCGQVINR
                     SALEAQFEGGVVWALAPTLKTAISFEAGRTVQQNLIDYPIVNITEAPLVEVHTVESTL
                     GPFGIGEQPVPPVAPAVLNAIFRATGKRIRQVPVRTVLSTCC"
     gene            complement(954..2423)
                     /locus_tag="VGA78_17065"
     CDS             complement(954..2423)
                     /locus_tag="VGA78_17065"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEX9895645.1"
                     /translation="MRWRILFLFLAGGVTTPLLGQQYRDPDGRLRVALVKQPFSPTGT
                     SAGPTTMAQGGIQQRLATLGATVRIDEAALTAQENQEYGGWKRLGMALGHFAELVERN
                     EREGYFTVGLLATCPSMPGLVAGLQHSGAVGRPLRIGMLWLDAHPDFNTPETTRSGSL
                     GGMPVAVATGRALHRMRLDAHLDPPLEDRHVVMGGVRLTDPLEQDLLDSSAIEQLSVD
                     DLRRRSAAVFAQLDRLTRLTDKIYIHIDMDVLDPREVMGHQNKVPDGPSSEELARLFE
                     EIFRRYPKASAIGFATIPATDEGGLSLAAVNRMIEGAIRGVIAREAGSAAPSPTTVPP
                     AGQAADYSGPTTTARSTVPCRVTRIVDGDTIECAEAGRVRLIGIDSPERDQGRFGGQA
                     AAALAELIPVGSRVQLEPDVDPRDRYGRVLGYLWRDNRLVNWLMVRRGWAVSATYPPN
                     VQYVDRLTEAQRLARQEQQGLWAAGGFACLPADHRNGRC"
     gene            complement(2559..3008)
                     /locus_tag="VGA78_17070"
     CDS             complement(2559..3008)
                     /locus_tag="VGA78_17070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895646.1"
                     /translation="MARHGVTLARVSLGIVFFWFGVLKFIPGLSPAASLATRTIERLS
                     GGLIGSSLALTLLAGWEVLIGLGLLTGKLLRLTLLLLFLQMPGTLLPLVLFPHETFTA
                     IPYAPTLEGQYIIKNLVLVSAAIVVGATVRGGRLTASPPSAGRRSAG"
     gene            complement(3115..3270)
                     /locus_tag="VGA78_17075"
     CDS             complement(3115..3270)
                     /locus_tag="VGA78_17075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895647.1"
                     /translation="MIRKLAGGHYRLYSRKVDPKTGRRRNLGTFRSRAAAERHEREVQ
                     FFKRRGG"
     gene            complement(3297..3725)
                     /locus_tag="VGA78_17080"
     CDS             complement(3297..3725)
                     /locus_tag="VGA78_17080"
                     /inference="COORDINATES: protein motif:HMM:NF016045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEX9895648.1"
                     /translation="MSPRPRTRFTRVARWTAHVTGRPTAFVLAAGVVLLWAVTGPLFH
                     YSDAWQLTINTATTIVTFLMVFLIQTTQNRDTEAIQVKLDELIRVTKGAHQSLLDLEE
                     LEEQDLALIRSKYNQLAAAAREDLRRGLTDTDVPPVEPVS"
     gene            complement(3751..3972)
                     /locus_tag="VGA78_17085"
     CDS             complement(3751..3972)
                     /locus_tag="VGA78_17085"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HEX9895649.1"
                     /translation="MATRKRARRKSTKRRYSPGASRAVESAMRRRKRGTLRSGPGGKA
                     GKVKSRKQAIAIGLSEARKKGARVPARKR"
     gene            complement(4070..4303)
                     /locus_tag="VGA78_17090"
     CDS             complement(4070..4303)
                     /locus_tag="VGA78_17090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895650.1"
                     /translation="MAVCEVCGNDYYLAFEVVTAGSRHVFDCFECAVHKLAPVCDHCG
                     CKIIGHGIEAEGTFFCCASCARKEGVEAAVDHV"
     gene            complement(4334..4771)
                     /locus_tag="VGA78_17095"
     CDS             complement(4334..4771)
                     /locus_tag="VGA78_17095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HEX9895651.1"
                     /translation="MTGMRIALASDHAGFRYKAMLGSLLAARGYEIVDYGTESETPVD
                     YPEVVRPAAVAVAQGVCQRGIVVGGSGNGEAMAANRHRGVRCAVCWNDESARLARAHN
                     DANMISLGQRLLAEDAVQRIVESWLVTPFEGGRHARRIALLDR"
     gene            4909..5394
                     /locus_tag="VGA78_17100"
     CDS             4909..5394
                     /locus_tag="VGA78_17100"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX9895652.1"
                     /translation="MEERRVTHQQVTSRVEYEVDPSVRTLTDEPVVIEPGAERLAELR
                     ERTLREAEATENAKARGRVVGRIGLAVDFLFFLVYALLGIRLVLALLNARQDAPFTQW
                     IYGVSEPLYAPFRGLLPNLTTEAGFTLALPLVFALLVYALLHAAIRRLLRVFSARPVV
                     V"
     gene            5646..7253
                     /locus_tag="VGA78_17105"
     CDS             5646..7253
                     /locus_tag="VGA78_17105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895653.1"
                     /translation="MRVHEVTDRVVHSSVGRRAFAMLASTFTLAALACGGEEAADPPT
                     GPGPGPTSVSLKVMTATTGTNLDGDGYTVSIDGGATQSIGVNETKTLTLSVAGAHSVL
                     LGGVAANCSVGGSNPRTANVSSGATVEVAFSVTCAAMAVIQVSTATTGTALDPDGYTF
                     SIDGGAAQSIGASETKSVTLGTTGNHTVQLAGLSVNCSVNGSNPKSVMVSSGTPATAA
                     FAVVCIGIPAPVTGKIAFETDRTGNFEVFVMNPDGTNPVNLTNHSSLDFEPAWSPDGS
                     KIAFVSRRTGSDEIYVMNPDGSGVTKLTSTLGTDRAPAWSPDGSKIVWESKRDGNDEI
                     YVMNANGTGQTNLTKHFADDSHPAWSPDGQKIAFHSNRDSNKGYEVYVMNPDGSGVVN
                     LTNHAADFDARPAWSPDGSKIAFVSSRDGNLEIYVMNSNGTGQTRLTNHPELESYPEW
                     SPDGSSIAFRSDRTGNVEIYTMNADGSGLVNRTSNSATDCHPSWKGSGGSSIMPPSPV
                     MQDVVVIFGPARSLSAQMVAEKACLGE"
     gene            complement(7421..8011)
                     /locus_tag="VGA78_17110"
     CDS             complement(7421..8011)
                     /locus_tag="VGA78_17110"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEX9895654.1"
                     /translation="MATTDPRVDAYIAKAGEFARPILTHLRDLVHAGCPGVEETMKWS
                     TPHFTFHGVLGSMAAFNAHCTFGLWNGAVKLPGNPGAVGQLGRITSLSDLPPDPDIIA
                     LVQEAARLNEAGVKRPAPAKRPRKPLTVPPDLRNAMTRNPQALETFENLSPSHKREYI
                     EWIVEAKGEEIRAKRVVTAVEWMAEGKPRNWKYMKR"
     gene            complement(8024..8097)
                     /locus_tag="VGA78_17115"
     tRNA            complement(8024..8097)
                     /locus_tag="VGA78_17115"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8061..8063),aa:Met,seq:cat)
     gene            complement(8158..>8790)
                     /locus_tag="VGA78_17120"
     CDS             complement(8158..>8790)
                     /locus_tag="VGA78_17120"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9895655.1"
                     /translation="AGGIWSTVGDMYRWVIALDQGRVVPNSQRELLFAPRPSPREGYG
                     WHVETVNGRVMRHKGGGSDDFASQILHYPADEVVIVWVSNNLRQRWRRTLNRNLAALV
                     LGDSVDSLPAVGRLPEASLRSLAGRFRSANGGFTLHAGDGFLYSDENALEIPTGVMFF
                     PTGTGRFTGFDPSSGSVSALRFEESAGTAVEITLADGKLLRASRLALDRR"
BASE COUNT         1512 a         3002 c         2815 g         1461 t
ORIGIN      
        1 caactgcaat ggacccgttc cgacgacctg gcccacgaca tgtaccagtc cagccagctg
       61 aatcggatga ccgcgggcct ggacccgagt gggctgccca tcgcctggat gcaccaggtc
      121 ggcgatttcc acctcacgat gttcggtccc tacaaccccc agttcgatcc caccgcggat
      181 ggtgacccct ggggcgggtt tgacacgccc tacgacttcc cggcattgca ggtggacctg
      241 gcactgatcg agtcaccggt gcccaccggg gcctggcgct cggtgacgta tccgcccgcg
      301 gtcatggcgc gcgagtgctt cctggatgag atcgcccacg cgaccgggcg ggatccggtg
      361 gagctgaggc tggcgctgct gccctctccc ggccggatca agtacgggag cggccagctc
      421 gacaacggcg accggctccg cgccgtgctc tccctggccg cggagcgctc gggctggagc
      481 tcgccctttc ttcgggagcg ccagggtcgg cggtggggcc gcgggatcgc ctgcaacagc
      541 taccaccagg gcaccatggt ggcgcaggtg gcggaagtat cggtcggtcc cgcgggtgac
      601 gtgaaggtcc accgggtagt ctgcgcggtc gactgcggtc aggtgatcaa ccggagcgcc
      661 ctcgaggccc aattcgaggg tggcgtggtc tgggccctcg ctccgacgct caagaccgcc
      721 atctcgttcg aggcgggacg aacggtgcag cagaacctga tcgattatcc cattgtgaac
      781 atcaccgaag ccccgctggt ggaagtccac acggtggagt ccaccctggg gccgttcgga
      841 atcggcgaac agcccgtgcc accagtggcc cccgcggtgc tgaacgccat cttcagggca
      901 accggaaaac gaattcgaca ggtaccggta cggacggtac tgagtacttg ctgttaacac
      961 cttccgttcc gatgatcggc cggtagacag gcgaagcctc cggcggccca cagaccttgt
     1021 tgctcctgcc gggccaggcg ctgggcctcg gtcagccggt cgacgtactg cacgttaggc
     1081 ggatacgtcg ccgagaccgc ccaaccccgt cgtaccatca gccagttcac cagccggttg
     1141 tcgcgccaga ggtagcccag gacccggccg tagcggtcgc gcgggtcgac gtccggctcg
     1201 agctgcactc ggctcccgac cgggatgagt tcggccagcg ccgcggccgc ctgaccgccg
     1261 aaccggccct ggtcccgctc cgggctgtcg atcccgatca accggacccg acccgcctcg
     1321 gcgcactcga tcgtatcgcc gtccacgatc cgggtcaccc ggcagggcac ggtcgaccgg
     1381 gcggtggtgg tcgggccgga gtaatcggct gcctggccgg ccgggggcac ggtggtcggc
     1441 gaaggggccg ccgaacctgc ctcgcgggcg atcaccccgc ggattgcgcc ctcgatcatc
     1501 cggttgaccg cggcgagcga gagcccgcct tcatcggtcg ctgggatggt ggcgaacccg
     1561 atggccgatg ccttcgggta gcggcggaag atctcctcga acagccttgc cagctcctcg
     1621 ctgctgggcc catcgggaac cttgttctgg tgtcccatca cctcccgtgg atcgagcaca
     1681 tccatatcta tgtggatgta gatcttgtcg gtgagccggg tgagccggtc gagctgcgcg
     1741 aacaccgccg ctgaccggcg ccgcagatca tcgacactca gctgctcgat cgccgaacta
     1801 tcgagcaggt cctgctccag cgggtcggtg agccgcaccc cgcccatcac cacgtggcgg
     1861 tcctccagtg gcggatccag atgggcgtcc agccgcatcc ggtgcagcgc ccgcccggtc
     1921 gctaccgcca ccggcatgcc gccgagcgat ccgcttcggg tggtctcggg ggtgttgaag
     1981 tccgggtgcg cgtccagcca cagcatcccg atccggaggg ggcgacccac ggctcccgag
     2041 tgttgcaggc ccgcgaccag tccgggcatg gagggacagg tcgccagcaa ccccaccgtg
     2101 aagtagcctt cgcgctcgtt gcgctccacc agctccgcga agtgacccag tgccatcccc
     2161 agccgcttcc agccgccgta ctcctggttc tcctgggcgg tgagggcggc ttcgtcgatc
     2221 cgcaccgtgg cgcccagggt ggccagccgc tgctgaatcc ctccctgggc catcgtggtg
     2281 ggcccggcgg aggtgccggt gggagagaac ggttgtttga cgagggccac ccgcagccgg
     2341 ccgtcgggat cgcgatactg ctgccccagg agcggggtag taacgccacc cgccagaaag
     2401 agaaacagaa ttctccagcg cacgactccc ccttgctcgg atcgccatca tacgccttgc
     2461 caaaccacgc aacgctgtac cggcgcaatc ggcggcatct gcggcatctg cggacacgtt
     2521 ggtctgccga acacgaagac atatccccag cagaacggtt acccggcgct gcgccgcccg
     2581 gcactgggag gggaggcagt caaccgacca cccctcaccg tcgcgcccac cacgatcgcc
     2641 gcgctgacca gcaccaggtt cttgatgatg tactgccctt ccagcgtcgg cgcgtaggga
     2701 atcgcagtga acgtctcatg ggggaagagc accaacggca gcagcgtgcc cggcatttgc
     2761 aggaacagca acagcagggt caaccgcagc agcttcccgg tcagcagccc gagcccgatg
     2821 agcacttccc aaccggccag aagggtcagg gccagggagg acccgatcaa cccgccgctc
     2881 aaccgttcga tagtcctggt cgcgagactg gcggccgggc tcaggccggg aatgaacttg
     2941 agcacaccga accagaagaa cacgatcccc agcgacaccc gggccagggt cacaccatgg
     3001 cgagccatcc agctcgtgac gcggacgtca agcggctcga gcggaggagg aacagtggtc
     3061 acggaagcaa cataggtgga cccgccgggc ccagtccacg cagccggcgg ttggctaacc
     3121 tccccggcgt ttgaagaact gcacttcccg ttcgtgacgc tccgccgcgg ctcggctccg
     3181 gaacgtgccc agattgcggc gccgcccggt tttcggatcg acttttctcg agtacagccg
     3241 gtagtgcccg ccggcgagct tgcggatcat ggagaccccc ttgcttatgg taggtgctac
     3301 gagaccggct ccaccggcgg gacatccgta tccgtcagtc cccgcctgag gtcttcccgg
     3361 gccgcggccg ccagttggtt gtatttgctc cggatcagag ccaggtcctg ttcctccagc
     3421 tcctccagat cgagcaggga ctggtgcgca cccttggtca cccggatcag ctcatccagc
     3481 ttcacctgga tcgcttcggt atcgcggttc tgggtggtct ggatcaggaa gaccatcagg
     3541 aaggtcacga tcgtggtggc cgtgttgatg gtcagctgcc aggcatcgct gtagtgaaac
     3601 aggggaccgg tgaccgccca caacaggacg actccggcgg ccaggacgaa cgccgtcggt
     3661 ctgccggtca catgggctgt ccaacgagcc acccgggtaa accgggtccg agggcgcggg
     3721 ctcatcgcgg gctctcgctg ttcagccgcg ctagcgtttc cgggccggaa cccgggcccc
     3781 tttcttccgc gcttcgctca gcccgatggc gatcgcctgt ttccggctct tgaccttgcc
     3841 tgccttgccg cccgggccgc tcctgagagt tccccgtttg cggcgtcgca tggcgctctc
     3901 gaccgcccga ctggcgcccg ggctgtagcg gcgcttagtg gacttccggc gggctcgctt
     3961 tcgggttgcc atacaccctc ctcattccgg attctcgatc cgggccagtc ccttgttggc
     4021 cggaccatgg cgggcggcgt gaaggctcgc gggcctgctc atggttacct cacacgtgat
     4081 cgaccgcggc ctcgactcct tccttacggg cgcaggaggc gcaacagaag aacgtcccct
     4141 ccgcttcgat gccgtggccg atgattttgc agccgcagtg gtcgcacacc ggcgccagtt
     4201 tgtggacggc acactcgaag caatcgaaca cgtgccgcga tcccgcagtg accacctcga
     4261 acgccaggta gtagtcgttg ccacagactt cgcagaccgc catgggagcc tccccgtacc
     4321 tggtaaagcg gcttcaacga tcgagcagag caatccgccg ggcgtggcgt ccgccctcga
     4381 agggcgttac cagccagctc tccacgatcc tttgcaccgc atcctcggcc agcaggcgct
     4441 ggcccagaga aatcatgttg gcgtcgttgt gagcccgggc cagccgggcg ctttcgtcgt
     4501 tccagcagac cgcgcagcgc actccccggt gccggttggc cgccatggcc tccccgttac
     4561 ccgatccgcc caccacgatt ccgcgctggc agacgccctg ggccaccgcc accgcggcgg
     4621 gccgcaccac ctcgggataa tccaccggcg tctccgactc ggtcccgtag tccacgatct
     4681 catagccgcg ggcagccagc agcgagccga gcatcgcttt atagcgaaac ccggcgtggt
     4741 cggaagcgag cgcaatccgc atcccggtca tggttacacc cgtcctccgt ccccccggcg
     4801 tcacatcaca tcactgatgg agacgaggta atgcgccatc ggtccacacg tgcaaagccc
     4861 ggcccgtggg atcgttctct ccttgtagac ctcaacggat ggggcatcat ggaggaacgg
     4921 agagtcaccc accaacaggt cacgtcgcgg gtcgagtatg aggtggatcc ctcggtgcgc
     4981 acgctgaccg acgaaccggt ggtcatcgag cccggcgccg aacggctggc cgagctgcgc
     5041 gagcggaccc tgcgggaggc ggaagcgacc gagaatgcca aagcccgggg ccgggtggtc
     5101 ggccgcatcg gcttggccgt ggatttcctc tttttcctgg tctacgccct gctcggcatc
     5161 cggctcgtgc tcgcattgct caacgcccgg caggacgcgc ctttcaccca gtggatctac
     5221 ggcgtgagcg aaccgctcta cgcccccttc cgcggcttac tgcccaacct gaccacggaa
     5281 gccgggttca ccctggccct gcccctggtg ttcgccctgc tggtgtacgc cttgttgcat
     5341 gcggcgattc ggcgattgct cagggtgttc tcggccagac cggtcgtcgt ctaaaccagt
     5401 cgaaggcggt cgaagccagt tgaagggcag aaccggcttc gaccagcttc gacgtcttcg
     5461 accgccttcg accgttaatt gtttcccccc aacaacttgc aaagttgatt cccggatgac
     5521 cggcaggtga ccggtggggc ctagtcttgc cctcgccggc gacgtgggat cgccgagctc
     5581 ttcgcggtac tcctggcggc cccgcgaaga acccggatca gcgtccgccg tgcaaagggg
     5641 gagcaatgag agtccacgaa gtcaccgatc gagttgtcca cagcagcgtc ggccggcgcg
     5701 cgttcgctat gctcgcgtcg accttcaccc tcgccgcact ggcatgcggt ggcgaggagg
     5761 cggctgatcc gcctaccgga ccgggaccgg ggccgacctc ggtttcgctc aaggtcatga
     5821 cggccaccac cggtaccaat ctcgacgggg acggctacac cgtgtcgatc gacggtggag
     5881 cgacccaaag catcggggta aacgagacca agacccttac cctgagcgtc gcgggagctc
     5941 acagcgtact gctgggcggc gtggcggcca attgcagcgt cgggggcagc aatccgcgca
     6001 cggccaacgt gtccagcggc gccacggtcg aagtggcctt ctcggtcacc tgcgccgcta
     6061 tggctgtgat ccaggtctcc accgccacca ccggtacggc cctcgatccg gacgggtaca
     6121 ccttctcgat cgacggcgga gcagcccaga gcatcggggc ctccgaaacc aagtccgtca
     6181 cgctcggcac caccgggaat cacacggtgc agctggccgg gctgtcggtg aattgcagcg
     6241 tgaacggcag caatcccaag agcgtcatgg tgtccagcgg cacacccgcc accgccgcct
     6301 tcgcggttgt ctgcatcggc atcccggcgc cggtcaccgg gaagatcgcg ttcgagaccg
     6361 accggaccgg gaacttcgag gtgttcgtga tgaacccgga cggcaccaac ccggtcaacc
     6421 tgaccaacca ctcgtccctc gatttcgagc cggcctggtc gcccgacggc agcaagatcg
     6481 ctttcgtgag ccgccggacc ggcagcgatg agatctacgt gatgaacccg gacgggagcg
     6541 gcgtgaccaa gctcacttcc accctgggca cggatcgcgc gccggcgtgg tcaccggacg
     6601 gcagcaagat cgtgtgggag tcgaagcggg acgggaatga cgagatctac gtgatgaacg
     6661 ccaacggcac cggtcagacc aatctgacca agcacttcgc cgatgactcg cacccggcct
     6721 ggtcgcccga cggccagaag atcgcgttcc acagcaatcg ggacagcaac aagggctacg
     6781 aggtgtacgt catgaacccc gacggcagcg gcgtggtgaa cctcaccaac cacgcggccg
     6841 acttcgacgc ccggccggcc tggtcgccgg atggatcaaa gatcgcgttc gtcagcagcc
     6901 gggacgggaa cctcgagatc tacgtgatga actcgaatgg caccggccag acccggctga
     6961 ccaaccatcc ggagctggag tcgtatccgg aatggtcccc cgacggcagt tccatcgcgt
     7021 tccgcagcga ccggacgggc aacgtcgaga tatacaccat gaacgcggac ggcagcgggc
     7081 tggtgaaccg gaccagcaac tcggcgacgg attgtcatcc ctcgtggaag gggtcgggag
     7141 ggtcctcgat catgccgccg tcgccggtga tgcaggatgt ggtggtgata ttcgggccgg
     7201 cccgttcgct gagcgcccag atggtggcgg agaaggcgtg cctgggtgaa taggttcgaa
     7261 gtgaactcgg cggagaagga ggagtgaact ggagagtgcc cagtgcccaa tgcccatcgc
     7321 agaaggacct gaccaagcga gctccctctg caatgggcat tcggcactcg gcattcttcg
     7381 gttcactccc acctctccca ctccgccctc gccgctcttt ctagcgtttc atgtacttcc
     7441 agttgcgggg tttcccctcc gccatccact ccaccgcggt caccactcgt ttggcccgga
     7501 tttcttcgcc cttggcctcg acgatccact cgatgtactc ccgcttgtgg ctggggctca
     7561 gattctcgaa ggtttccagc gcctgggggt tccgggtcat cgcgttccgg agatcgggcg
     7621 gcacggtcag gggcttgcgg ggccgtttgg ccggtgccgg tcgcttgacg cccgcctcgt
     7681 tgagccgggc agcctcctgc accagggcaa tgatatccgg atcgggcggc agatccgaca
     7741 gcgaggtaat ccggcccagc tgacccacgg cccccgggtt gccgggaagc ttgaccgctc
     7801 cattccagag gccgaaggtg cagtgggcgt taaaggcggc catgctgccc agcacgccat
     7861 gaaacgtgaa gtggggcgta ctccacttca tggtctcttc cactccggga cagccggcat
     7921 ggaccaggtc gcgcaggtgg gtcaggatcg ggcgggcgaa ttcgcccgct ttggcgatgt
     7981 aggcgtcaac tcgggggtcg gtggtggcca tatggaagga aaatagctgg ggtgggactc
     8041 gaacccacga ccccggcatt atgagtgccg tgctctaacc acctgagcta cccagccttg
     8101 ggacggcaat cctaaaggac tccccggtcc caggcaagcg cgcgccaacg gcacttatca
     8161 gcgccgatcc aatgccaacc ggctcgcccg caacagcttc ccatcggcca aggtgatctc
     8221 caccgccgtt ccggcggact cttcgaagcg gagcgcggac acggaaccgc tcgacggatc
     8281 gaagccggtg aagcggcctg ttccggtcgg gaagaacatg acgccagtag ggatctccag
     8341 cgcgttttcg tcgctgtaga ggaagccgtc gccggcgtgg agggtgaagc cgccgttcgc
     8401 gctccggaac cgacccgcca aggatcgcaa cgatgcctca ggcagtcgac ccacagcggg
     8461 gagcgagtcg accgaatcgc cgaggaccaa tgcggcgagg ttccggttga gagttcgccg
     8521 ccagcgctgg cgcagattgt tggacaccca cacgatcacg acctcgtccg cgggatagtg
     8581 gaggatctgg ctggcgaagt catccgagcc gccgccctta tgccgcatga cccgtccatt
     8641 caccgtctcc acgtgccagc catagccttc gcgcggggaa ggtctcggcg cgaacagcag
     8701 ctcgcgctgg gaattcggca ccactcggcc ctggtccagc gcgatcaccc agcgatacat
     8761 gtcgcccacc gtcgaccaga tgccaccggc
//
LOCUS       DASWKS010000597         3550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3284039, whole genome shotgun sequence.
ACCESSION   DASWKS010000597 DASWKS010000000
VERSION     DASWKS010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3284039"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2037)
                     /locus_tag="VGA78_17125"
     CDS             complement(<1..2037)
                     /locus_tag="VGA78_17125"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX9895656.1"
                     /translation="MRYLLVASAALLSPTLLTAQERPSDTLLTVNRYLDFESVSQPKV
                     SPDGSQVFWTRSSVDKMKDQFETGLWLMNADGSKQRFLVKGSNAVWSPDGTRIAYLAE
                     GEPGGNQIWVRYMDAEGAITQVTREQKASANIKWSPDGKSIGFSMFVPSVPSWKIDLP
                     SAPPGANWTKAPRLVEALHYRADRQGFLDAGYTHLFVVPAIGGTPRQITKGEWNVGAR
                     GTGLPGSVGWDWAPDGQSVVVEGNDDPKAELQRLRSDLYRVTLATGEKRRLTDGAGFW
                     SNPQVSPDGKLIAYLGRSNPEDTYRTSVLHTMNLDGSGATARTQGLDRDPSSVIWAPD
                     SRGLYFTAADQGTSNLQYVALGGAPRQLTTGVHMLTQTSIAKNGTAFAVRSHYSAPPD
                     IVRIDLKRPAALTQLTEVNADLLAGTRLGEVEEVWYTSTGGARVHGWIVKPPSFDPSK
                     KYPLIMEIHGGPHGMYGVGFSYMYQNFAANGFVVLYTNPRGSTGYGSAFGNAINKAYP
                     SVDYDDLMAGVDTVVGRGYIDTNAMYVGGCSGGGVLSSWVIAHTTRFAAAAVRCPVIN
                     WMSFAGNTDIPLFTFNWFEKPFWEDPSAWLKQSSLMHVKNVKTPVLLMTGVLDLRTPM
                     PETEQYYAALKMLGVPVAMLRFENEWHVTSSRPSNFMRTQLYMMSWYKRWTKGAQ"
     gene            complement(2130..>3550)
                     /locus_tag="VGA78_17130"
     CDS             complement(2130..>3550)
                     /locus_tag="VGA78_17130"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX9895657.1"
                     /translation="AMQRREFLELTGSALVAPALQQTAQLPEPPRLDGSLAYDGVSLQ
                     AAATDGGGFTQRLPRVVLKPGSVDDMARMVSYANHHRLTVAMRGRGHSVYGQSLAPRG
                     IVIDSRSLGAVRMVGKTLEAEAGASLGDAARTALDAGFALPVMSPCTMLSVGGFLSVG
                     GESLGTRRHGAFVDQVAELDVVTGTGQLVTCSATQEPDLFDLVLAGMGQCGIIVRARL
                     WVLPAPAQTATRTLTYSSLESFVHEQMRLATDLRIDHVSGQILPGPGGSWRFLTTVTT
                     LGVEGPAPDPADWLQEYSPRHLSDLTRSPYRSYLLGAEPPSAAAARDGDPAPQVLHPQ
                     PSLAVWLPARAGHELIRILLATPRATAGVTSMLCRALPTGVFHRPLFRVPEEATMLAF
                     WLRRAVVPGQGSSLEFQLDANARFLERALALGAKRYPPYGGAASPADWRKHYGENLYR
                     QLGAAKRRYDPRNVLTPGVRIF"
BASE COUNT          617 a         1170 c         1187 g          576 t
ORIGIN      
        1 ctgcgccccc ttggtccacc gcttgtacca gctcatcatg tacaactggg tccgcatgaa
       61 gttcgagggc cgggagctgg tgacgtgcca ttcgttctcg aaccggagca tggccaccgg
      121 gacgcccagc atcttgagcg cggcatagta ctgctccgtc tccggcatcg gggtccgcag
      181 gtccagcacg ccggtcatca gcagcacggg ggtcttgacg ttcttcacgt gcataagcga
      241 ggactgcttg agccaggcgg aagggtcttc ccagaacggc ttctcgaacc agttgaaggt
      301 gaagagcgga atatcagtgt tgccggcgaa actcatccag ttgatcaccg gacagcgcac
      361 cgccgccgcg gcgaaccggg tcgtgtgcgc gatcacccag ctcgacagca ccccaccgcc
      421 ggaacacccc cccacgtaca tcgcgttggt gtcgatgtag ccgcgcccca ccacggtatc
      481 aacaccggcc atcaggtcat cgtagtccac gctgggatac gctttgttga tggcgttgcc
      541 aaacgcgctg ccgtagccgg tgctgccacg ggggttggtg tagagcacca cgaacccgtt
      601 agcggcgaag ttctggtaca tgtagctgaa accgacgccg tacatcccgt gcgggccgcc
      661 gtgaatctcc ataatcagcg ggtacttctt cgacggatcg aaggacggcg gcttgacgat
      721 ccagccgtgc acccgcgcgc cgccggtcga ggtgtaccag acctcttcga cctcacccag
      781 gcgggtgccc gcgagcagat cggcgttgac ttcggtgagc tgggtcaggg cggccggccg
      841 cttgaggtcg atccgcacga tgtcgggggg ggccgagtag tgcgaccgca ccgcgaaggc
      901 ggtcccgttc ttcgcgatcg acgtctgggt cagcatatgg acgcctgtgg tcagctgccg
      961 gggggcgccg ccgagggcga cgtactggag attgctggtg ccttgatcgg cagcggtgaa
     1021 gtagagtccc cgggaatcgg gcgcccagat gaccgacgac gggtcgcgat ccagaccctg
     1081 ggtccgggcc gtggccccac tcccatcgag attcatggta tgcagcacgc tggtgcggta
     1141 ggtgtcttcc ggattggacc ggccaaggta cgcgatcaac ttgccatcgg gtgacacctg
     1201 gggattgctc cagaagccgg ccccgtcggt caagcgccgt ttctcgccgg tggcgagggt
     1261 gacccggtag agatcagagc ggagccgctg cagttccgcc ttaggatcgt cgttgccttc
     1321 caccaccacc gactgcccat cgggcgccca gtcccatccc acgctgccgg gcaagccggt
     1381 gccgcgggca ccgacattcc attcgccttt ggtgatctgg cggggagtgc ccccaatggc
     1441 cggcactacg aagagatggg tgtagccggc gtcgaggaaa ccctgccggt cggcccggta
     1501 atggagtgct tccaccagcc ggggcgcctt ggtccagttg gcacctggcg gcgcggacgg
     1561 caggtcgatc ttccaggagg gaaccgaggg gacgaacatg ctgaaaccga tcgatttccc
     1621 atcgggagac cacttgatgt tcgccgacgc cttctgctcc cgggtgacct gggtgatggc
     1681 gccttcggcg tccatgtacc ggacccagat ctggttcccg cccggctcgc cctcggccag
     1741 atacgcgatg cgcgttccat caggcgacca gaccgcattg gaccccttga ccaggaagcg
     1801 ctgcttggag ccgtcggcat tcatcagcca gagccccgtc tcgaactgat ccttcatctt
     1861 gtcgaccgag gaccgggtcc agaacacctg cgacccgtca ggagagacct tgggttgact
     1921 gaccgactcg aagtcgagat accggttcac cgtcaggagg gtatcggagg ggcgctcctg
     1981 ggcggtaagg agtgtgggag acaggagcgc agcactggcc acgagcagat atcgcatgag
     2041 tcctccagaa attgtcacga atcgtgaggg gggagtcgat agaccccttc gactgtcttc
     2101 gaccagcttc gaccgtcttc gactagtagt tagaagatac gtacgccggg agtcaaaacg
     2161 ttgcgcgggt cgtagcgccg tttggccgcc cccagttgtc ggtacaggtt ctcgccataa
     2221 tgcttccgcc agtcggccgg cgaggcggcc cctccgtagg gcggatagcg cttggcgccc
     2281 agcgcgaggg cccgctccag gaagcgggcg ttggcgtcca gctggaattc gagactgctt
     2341 ccctgccccg ggaccaccgc ccgccgcaac cagaacgcca acatcgtcgc ttcctccggc
     2401 acccggaaga gggggcgatg aaacacgccg gtcgggagcg ctcgacacag catgctggtc
     2461 accccggccg tcgccctcgg cgtcgccagg aggatccgga tcagctcgtg tccggcccgg
     2521 gccggaagcc agactgcgag cgagggttgg gggtgaagga cctggggcgc cgggtcccca
     2581 tcccgcgcgg ccgctgccga cgggggctcg gcgcccaaca agtagctccg gtagggcgac
     2641 cgggtgagat cggacaagtg gcggggcgag tattcctgca accaatccgc cggatccggg
     2701 gcggggccct caacgcccag cgtggtcact gtcgtgagga agcgccacga tccccccggt
     2761 ccggggagga tctggcccga aacgtggtcg atccgaaggt cggtggcgag ccgcatctgt
     2821 tcgtggacga agctctcgag cgatgagtag gtcagggtcc gggtcgcggt ctgggccggt
     2881 gccggcaaca cccagagccg ggcccggacg atgatcccgc attggcccat ccccgccaag
     2941 accaggtcga acaggtccgg ctcctgggtc gcggaacagg tgaccagctg gccggtcccg
     3001 gtcaccacgt ccagttcggc cacctgatcg acgaacgcgc cgtgacgccg cgtgcctaac
     3061 gactcgccgc ccacgctcag gaatcccccc accgagagca tggtacaggg ggacatgacc
     3121 ggcaaggcaa atccggcatc gagcgccgtc cgggcggcat cccccagcga agcccccgcc
     3181 tccgcctcga gcgtcttccc caccatccgc acggcgccca gggagcggct gtcgatcacg
     3241 ataccccgcg gggcaagcga ctgcccgtag accgaatggc cccgtccccg catcgcgacg
     3301 gtgagccggt ggtgattggc gtaggagacc atgcgggcca tatcgtccac cgagccgggc
     3361 ttgagaacga cccgcgggag ccgctgggtg aacccaccgc cgtcggtggc cgcggcctgg
     3421 agggacacgc cgtcgtacgc caggctgccg tccagccgag gcggctccgg cagctgcgcg
     3481 gtttgctgca gcgccggagc aaccagggca gagcccgtca gttcgaggaa ttcccgacgt
     3541 tgcatcgcac
//
LOCUS       DASWKS010000598         8048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3618543, whole genome shotgun sequence.
ACCESSION   DASWKS010000598 DASWKS010000000
VERSION     DASWKS010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3618543"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            378..1574
                     /locus_tag="VGA78_17135"
     CDS             378..1574
                     /locus_tag="VGA78_17135"
                     /inference="COORDINATES: protein motif:HMM:NF021596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HEX9895658.1"
                     /translation="MGFALTAYPIGVDRGWVDRASAAQRTLTTMQYFWRQPQGPAATG
                     TAGYRGFFYHFLDMTTGLRFQTVELSTIDTTLLLGGVLFCREFFDGANPTETSIRAFA
                     DSLYRRVEWSWARRSPPLVNMGWKPESGYLSHDWRGLNEAMLLYVLALGSPTFPVEPA
                     AWEAWTSTYQWGSFHGQEHVGFAPLFGHQYSHVWIDFRGIKDSYMRGRGIDYFENARR
                     ASLAQQSYAVANPEGWSGYGRELWGLTASDGPADVTLPVRGTPRRFFTYAARGASFTE
                     IRDDGTLAPTAAGGSVPFVPEIAIPTLLAMRVRYGEWLFGQHGFLDSFNPTFQFDVPV
                     QHGRVVAGVGWFDGDYLGIDQGPILAMLANHRRDFVWKYMRKSPYIVAGLKRAGFTGG
                     WLDQAP"
     gene            1571..2851
                     /locus_tag="VGA78_17140"
     CDS             1571..2851
                     /locus_tag="VGA78_17140"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX9895659.1"
                     /translation="MNRLLLAAALALGLGCRAAEDDTTLRFWGFGREGEVVAQLVPGF
                     EREHPGIRVRVQSIPWTAAHEKLLTAQVGRATPDVAQLGNTWIPELVTLRALEPLEPW
                     RARSAEIRSEGYFSGIWATNLIEGQLYGIPWYVDTRVLFYRKDLLAEAGYQTVPEDWA
                     RWREAMLAMKRLGGPSRYPLLLPLNEWPPQVILGLQAGSTLISPEGYGAFSDSAFSRG
                     FQFMLDLYRDGLAPPFASTEIANLYQEFARGTIAMYITGPWNLGEFRRRLPAEQQDQW
                     ATAPLPGPTGAASGVSLAGGASLVIFRASEKKEAAWRLIEYLSRPDVQAEFYRLTGDL
                     PARQEAWSDSALAGDREAQAFRAQLERVVPTPMIPEWENVTQKVMDWTERAVRGGMPA
                     AQALSGLDAEVDRLLERRRWLLSRDKPRAAGAIP"
     gene            2848..3738
                     /locus_tag="VGA78_17145"
     CDS             2848..3738
                     /locus_tag="VGA78_17145"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX9895660.1"
                     /translation="MTAPGSARETRAGWAFTAPALLLIAVFFVLPALGALALSFTDFD
                     IYSIGNPADTRFVGLGNYRDLLGNPVFWIALRNTGFFVLLGVPLSIALSLGAALLLNT
                     RLGRWGGFFRTAYFTPYVTTLVAVAIVWRYLYHPQYGWVNATLGAVGIHPIDWLGSPR
                     WAMVAIVLLSVWKGFGYTMVVFLAGLQSIPEELYEAGRLDGAGPWRQFRHITLPLLRP
                     TFLFVAVITFIGYCQVFAEPYVMTQGGPLKSTTSIVLFMYEEGFRWWRIGPAAAIAVV
                     LFLIMLVATAVQLRFRREEL"
     gene            3735..4547
                     /locus_tag="VGA78_17150"
     CDS             3735..4547
                     /locus_tag="VGA78_17150"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX9895661.1"
                     /translation="MTRRPLVILLLIAGAVFALGPLLWMVSASLMAAGDASSTPPPIL
                     PRTATLEQYRVLIDRLALGGYLFNSAVTAISATLLSLFINSLAGYAFAKLRFAGRDRL
                     FGGLAGLLVVPAQVGMLPLFLLLRELGVINTYLGVIIPWMASVLGIFMVRQYALSIPD
                     DLLDAARLDGASEFRIYRSVVLPVISPILVTLAIYTFLGSWNDFLWPLIVLSDDRWYT
                     LPVALAGLSGEYVQDVELMMAGAVVTVLPVLLVFLALQRYYIQGIMQGSVKG"
     gene            4544..7690
                     /locus_tag="VGA78_17155"
     CDS             4544..7690
                     /locus_tag="VGA78_17155"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HEX9895662.1"
                     /translation="MTGALALVAWLALGQADSSRTTTLDQFEDITPWSAHPADGVSLT
                     LHSDSGHRGRALRMDFSFASGGGYAIARRALPLTLPPNYAFTLWIRGEAPPNTLEFKL
                     LDGSGENVWWYTERDRRFDGSWQRITIRKRQIGFAWGPQGGGELGRMAALEIVITAGS
                     GGGSGSVWIDDLALTEQPVITPYDGTPTVTSPVAAPGHPAGAIVDGDTATSWRSDAGG
                     AVNLTVDFSRAREFGGVTLLWEPDRAASEYDVLLSDDGRAWNLVRQVRGGNGGRDHLY
                     LPDGEARFLQLSLRRADGPAGYGLADLVIRPIEFGESRNAFFETIAGESAPGSFPRYY
                     LGERAYWTVIGAEGAPEEGLINEDGAVDAGAGAFSVEPFLYLDSSLVTWRDVKARVGL
                     EQGDLPIPSVEWTAPDLSLTVTGFATGGADRSSLVLRYRVHNRGSSARPVVLYLAVRP
                     FQVNPPWQFLGVPGGAARIDSLRWTGAELQVNGDRRVIPLVEPADAGVSSFDGGEIVE
                     YLRRGQIPRPRVARDPSGAASAGLAFPLRLGVGDSAEVAVEIPLRPGGESALPSRDVA
                     AARTAMAAASRRWREIVDRGTVTLPGSGDAIARTIRSTIAWILVNRDRAAIQPGSRSY
                     ERSWIRDGALTSAALMRFGHADVVREFIDWYAGFLYPNGKVPCCVDRRGADPVPEHDS
                     HGEFVYLVMEYWRHTGDRSLLERMWPKISGVVGYIDSLRQTLRTAEYRTPDKQVFFGL
                     LPPSISHEGYSAKPMHSYWDDFFALRGLKDAAQMAQALGHRGEATRIGGIRDEFRRDL
                     LASIQRAMRRHRIEFIPGSADLGDYDPTSTTIAVSPGGEESNLPRAALEHTFDRYWRE
                     VSTRRDSTLAWDAYTPYELRSVGTLLRLGRKDRALSLLTMFLGDREPPEWNQWPEVVW
                     RDRRADKFIGDSPHTWVGSDFLRSAADLFVYEREADSALVVSAGIAEEWLTGEGVRVR
                     GLSTWWGSLTYQVRLEGSTVRLRFEPGLRLPPGGLVVKSPGAVVPRQVRVDGREMRPT
                     AAGEVILRVLPTELVFVR"
     gene            7690..>8048
                     /locus_tag="VGA78_17160"
     CDS             7690..>8048
                     /locus_tag="VGA78_17160"
                     /inference="COORDINATES: protein motif:HMM:NF017930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895663.1"
                     /translation="MVDAPELSNGSYRVRLSDTGGGYSAWRDLALTRWSADWAAEVQG
                     FLLLIRNIDQGHWWWVGSSQDRSCLVTTRLEVAVAPDADIELRRLTVGNSASTAQRLE
                     LTSYVEVALNHPAADAG"
BASE COUNT         1132 a         2637 c         2833 g         1446 t
ORIGIN      
        1 caactcgggc tgactttcga cctgttcaac gtgttcaaca agcagaacct gggctgcttc
       61 aatagtgtgg ggaatcccaa tgacccgaac ttcgaccggg ccagctgtgt gatctccgat
      121 ccccggcggc tccagatcgg aggagatgtg cggttctgat ccggttacgc tttctcgccg
      181 gtgcgcttgc actcttcggc gcggcctgcg gcctcggctc ggctccgtcc acggatccga
      241 atccgtcgcc gcgggcggcg gcgtttctcg acaccctgga gcagcgcacc ttcacgttct
      301 tctgggagcg gagcagcccc accaccggcc tgacgccgga ccgctggccc acgcccagct
      361 tctccagtat cgccgccgtg ggatttgccc tgacggcgta tcccatcgga gtggatcgcg
      421 gctgggtcga ccgggccagc gcggcccagc gcaccctcac caccatgcag tacttctggc
      481 gccagcccca aggcccggcc gcgaccggca ccgcggggta ccggggcttc ttctatcact
      541 ttctcgacat gaccaccggc ctccggttcc agacggtgga gctgtcgacc atcgatacca
      601 ccctgctgct gggcggggtg ctgttctgcc gcgagttctt cgacggcgcc aacccgaccg
      661 agacctccat ccgggcgttc gccgattcgc tctaccggcg ggtggaatgg tcctgggctc
      721 gacgcagtcc gccgctggtc aacatgggat ggaagccgga gagcggctat ctgtcccacg
      781 actggcgggg cctcaacgag gccatgctgc tgtacgtgct ggccctcggc tcgcccacct
      841 ttccggtcga gcccgcggcc tgggaagcgt ggaccagtac ctatcagtgg ggcagtttcc
      901 acggccagga gcacgtgggg ttcgcgccgc tcttcgggca ccagtacagc catgtctgga
      961 tcgatttccg ggggatcaaa gacagctaca tgcgagggcg cgggatcgac tacttcgaga
     1021 atgcccgccg cgcgtcgctg gcgcagcagt cctatgccgt cgccaatccg gagggctggt
     1081 cgggatacgg cagagagctg tggggactca ccgcgtccga tggtcccgcc gacgtgacct
     1141 tgccggtgcg ggggacgcct cggcgattct tcacctatgc ggcgcgcggc gcctcgttca
     1201 ccgagattcg cgacgacggg accctggcgc ccaccgccgc cggcggctcg gtgccgttcg
     1261 ttcctgagat cgcgatcccg accctgctgg cgatgcgggt ccggtacggc gagtggcttt
     1321 tcggccagca cggctttctg gactcgttca atcccacgtt ccagttcgac gttccggtgc
     1381 agcacgggcg ggtggtcgcc ggggtgggtt ggtttgacgg cgactacctg ggcatcgacc
     1441 agggccccat cctcgccatg ctggccaatc atcggcggga tttcgtgtgg aagtacatgc
     1501 ggaagagccc ctacatcgtc gccgggctca agcgggcagg cttcaccggc ggctggctcg
     1561 accaggcgcc atgaaccggc tcctcctcgc ggccgcgctc gcactggggc tcgggtgccg
     1621 cgccgccgag gacgacacca cgctgcggtt ctggggtttc ggccgcgagg gggaagtggt
     1681 ggcgcagctg gtgcctggat tcgagcggga gcatcccgga atccgggttc gggtccagtc
     1741 gatcccctgg accgccgcac acgagaagct gctcaccgcc caagtcggcc gggccacgcc
     1801 cgacgtggcc caactcggca acacctggat ccccgagctg gtgacgttgc gggcgctgga
     1861 accgctggag ccgtggcggg cccggtcggc ggagatccgg tctgagggct atttcagcgg
     1921 tatctgggcc accaatctca tcgagggtca gctctacggc attccgtggt atgtcgatac
     1981 ccgggtgctg ttctaccgga aggacctgct ggcagaggcc ggttaccaga ccgtgccgga
     2041 ggactgggcc cgctggcgcg aggccatgct ggcgatgaaa cggctgggcg gtcccagccg
     2101 ttatccgctg ttgctgcccc tcaacgaatg gccaccccag gtcattctgg gcctgcaggc
     2161 cggatcgacc ctcatctcgc ccgagggata cggtgcgttc agcgacagcg cgttcagccg
     2221 tgggttccag ttcatgctgg atctctatcg cgacgggctg gcgccgcctt tcgcgagcac
     2281 cgagatcgcc aacctctatc aggaattcgc ccgcggcacg atcgccatgt acatcaccgg
     2341 gccctggaac ctgggagagt tccggcgccg gctgccggcc gagcagcagg accagtgggc
     2401 caccgctccg ctgcccggac ccaccggcgc agccagcggc gtgtctctag ccggaggagc
     2461 gagtctggtg atcttccggg cctcggagaa aaaagaagcg gcctggcggt tgatcgagta
     2521 cctctcgcgt cccgacgtgc aagccgagtt ctatcggctc accggcgatc tgccggcccg
     2581 ccaggaagcc tggagcgact cggccctggc cggggatcgt gaggcgcagg catttcgggc
     2641 gcagctggag cgggtggtgc cgacgcccat gatcccggag tgggaaaacg tcacccagaa
     2701 ggtgatggac tggaccgaac gcgcggtccg gggcggaatg ccggccgccc aggcgttgtc
     2761 gggactggac gccgaggtgg atcgcctgct ggagcgacgc cgctggctgc tgtcgcggga
     2821 caagcccagg gcggccgggg cgattccgtg accgcgccgg gctcggcccg agagacgcgg
     2881 gcggggtggg ccttcaccgc gccggcgctg ctgctcatcg cggtgttctt cgtgttgccg
     2941 gccctgggcg cgctggcgct gagcttcacc gacttcgaca tctactcgat cgggaacccc
     3001 gccgacaccc ggttcgtggg tctgggcaac taccgggatc tgctggggaa tccggtgttc
     3061 tggattgcgc tccggaatac cgggttcttc gtgctgctgg gggtgccgct ctccatcgcg
     3121 ttatcactgg gggcggcgct cctgctcaat acccggctgg gccgctgggg cggctttttc
     3181 cgcaccgcgt atttcacccc ctacgtcacc acccttgtcg cggtcgctat cgtgtggcgc
     3241 tacctctacc acccgcagta cgggtgggtg aacgcgacgc tgggcgcggt cggtatccac
     3301 ccgatcgact ggttaggcag tccccggtgg gccatggtcg ccatcgtgct gctgtcggtg
     3361 tggaaaggct tcggctacac catggtggta tttctggccg gcctgcaaag cattcccgag
     3421 gagctgtacg aggccggccg gctggatggc gctgggccct ggcgccagtt ccgccacatc
     3481 acacttcccc tgctgcgtcc caccttcctc ttcgtggcgg tgatcacctt catcgggtac
     3541 tgccaggtct tcgccgagcc gtacgtgatg acccagggcg gtccgctcaa gagcaccacc
     3601 agtatcgtgc tcttcatgta cgaggaggga ttccgctggt ggcggatcgg tcccgcggcc
     3661 gcgatcgcgg tggtgctgtt tctgatcatg ctggtcgcga ccgcggtcca gctccgcttc
     3721 cggcgggagg agctgtgacc cgccggcccc tggtgatcct gctgctcatt gcgggcgcgg
     3781 tgttcgcgct gggaccgctc ctctggatgg tgtcggcctc gctgatggcg gcgggcgacg
     3841 ccagcagcac gcccccgcca atcctgcccc gtacggcgac cctggagcag taccgggttc
     3901 tgatcgaccg gctggccctg ggcggctacc tgttcaacag tgccgtgacc gcgatcagcg
     3961 ccaccctgct ctcgctcttc atcaactcgc tggcggggta tgccttcgcc aaactccgct
     4021 tcgccggacg cgaccgtctg ttcggggggc tggccggctt gctggtggtg ccggctcagg
     4081 tcgggatgct gccgctcttt ctgttgctgc gcgaactggg ggtgatcaac acgtacctgg
     4141 gtgtgatcat cccctggatg gcgagcgtcc tgggcatctt catggtacgg cagtacgcgc
     4201 tgtctatccc tgatgatctg ctggacgcgg cccggctgga cggcgccagc gagttccgga
     4261 tctaccgttc ggtggtgctg ccggtgatct cgcccattct ggtgacgctg gcgatctaca
     4321 ccttcctggg ttcctggaac gatttcctgt ggcccctgat cgtgctgagc gacgatcgct
     4381 ggtacaccct gccggtggca ctggccggac tgtcgggcga gtacgtacag gatgtggagc
     4441 tgatgatggc cggcgccgtg gtgaccgtgc tgccggtgct gctggtcttc ctggcgctgc
     4501 aacgctacta catccagggc atcatgcagg ggagcgtgaa gggatgacgg gcgcgctggc
     4561 gctcgtggcc tggttggccc tggggcaggc ggattcgagc cgcaccacga ccctcgacca
     4621 gttcgaggac atcaccccgt ggtccgctca tccggccgac ggcgtctcac tgactctgca
     4681 cagcgattcg gggcaccggg gacgggcgct ccggatggat ttttccttcg ccagtggtgg
     4741 cggctatgcc atcgcccggc gggcgctgcc gctcaccctg ccgcctaact acgccttcac
     4801 tctctggatc cggggcgagg cgccgcccaa cacgctcgag ttcaagctgc tggacggaag
     4861 cggcgagaac gtctggtggt acaccgaacg ggaccggcga ttcgacggga gctggcagcg
     4921 catcaccatc cgcaagcggc agatcggttt tgcctggggc ccgcagggcg gcggcgagct
     4981 ggggcgcatg gccgcgctcg aaatcgtgat taccgcagga agtggcggcg ggtccggctc
     5041 ggtctggatc gacgacctcg ccctcaccga gcagccggtg atcacgccct atgatggtac
     5101 ccccaccgtc acctcaccgg tcgcggcgcc gggtcacccg gccggcgcga ttgtggacgg
     5161 ggataccgcc acctcctggc gcagcgatgc ggggggcgcg gtgaacctga ccgtcgattt
     5221 cagccgggcc cgggagttcg gcggggtgac cctgctgtgg gagccggacc gcgccgcgag
     5281 tgagtacgac gtgctgctct cggacgatgg ccgggcctgg aacctggtgc ggcaggttcg
     5341 gggcggcaac ggcggccgcg atcacctgta ccttcccgac ggcgaagcgc gcttcctgca
     5401 gctgtcgttg cgccgggcgg atggaccggc cggttacggt ctggcagacc tggtgatccg
     5461 gccgatcgag ttcggcgagt cgcgcaacgc cttcttcgag accatcgccg gggagtcggc
     5521 tccggggtcc tttccgcgct actacctggg ggagcgggcc tactggacgg tgatcggggc
     5581 ggagggcgcg ccggaagagg ggctcatcaa cgaggacggg gcggtggacg cgggggcagg
     5641 ggcgttctcg gtggaaccgt ttctctacct cgattccagc ctggtcacct ggcgggacgt
     5701 gaaggcccgc gtagggctgg agcagggaga ccttcccatc ccatcggtcg agtggactgc
     5761 gccggacctc tcgctgaccg tcacggggtt cgcgaccggc ggcgcggacc gctcgtcact
     5821 ggtgctgcgc taccgggtac acaaccgggg ttcgtcggcg cgtcctgtgg tgctctatct
     5881 cgcggttcgg ccgttccagg tgaatccacc ctggcagttt ctgggtgtgc ccggtggggc
     5941 ggcccggatc gactcgctgc gctggaccgg cgccgagctc caggtgaatg gcgaccggcg
     6001 ggtgatcccg ctggtggagc cggccgatgc aggggtttcg agcttcgatg ggggcgagat
     6061 cgtggagtat ctgcggcggg ggcagattcc gcggccccgg gtcgcgcggg atccgtcagg
     6121 cgcggcgtcc gccgggctgg cgtttccgct gcggctgggg gtgggggact cggccgaagt
     6181 cgccgtggag attccgctcc ggcccggcgg ggaatcggcg ctgccgtcgc gggacgtcgc
     6241 cgccgcccgg acggcgatgg cagccgcctc gcggcgctgg cgggagatcg tagaccgggg
     6301 gacggtcacg ctgcccggtt ccggcgatgc catcgcccgc accatccgca gcaccatcgc
     6361 ctggatcctg gtgaaccggg atcgtgccgc gatccagccg ggatcccggt cctacgaacg
     6421 atcctggatc cgggatggag cactcacgtc cgccgcactg atgcgcttcg ggcacgccga
     6481 tgtggtccgg gagttcatcg attggtatgc cggcttcctg taccctaacg gcaaagttcc
     6541 ctgttgcgtg gatcgccgcg gggccgatcc cgtgccggaa cacgacagtc atggcgagtt
     6601 cgtttatctg gtcatggaat actggcgcca caccggcgat cggagtctgc tggaacggat
     6661 gtggcccaag atctccggcg tggtggggta catcgactcg ctgcggcaga cgctccgaac
     6721 cgcggagtac cggaccccgg acaaacaggt gttcttcggt ctgcttccgc cctcgatcag
     6781 tcacgaaggc tattcggcca agccgatgca ttcgtactgg gacgacttct ttgcgctgag
     6841 ggggctcaag gacgcggccc agatggcgca ggcgctgggg catcggggcg aagcgacccg
     6901 tatcggcggc atccgggacg agttccggcg ggatctgctg gcctcgatcc agcgcgccat
     6961 gcgacggcac cgcatcgaat tcatccccgg ctccgccgac ctgggcgact acgacccgac
     7021 ctccaccacg atcgcggttt cgcccggtgg ggaagagtcg aatcttcccc gagcggccct
     7081 ggagcacacc ttcgaccgtt actggcgtga agtctccacc cggcgtgaca gcacgctcgc
     7141 gtgggacgcg tacacgccgt acgagctccg ctcggtcggc accctgctgc gcctgggccg
     7201 gaaggaccgc gctctgtcgt tgctgaccat gttcctgggc gaccgggagc cgccggagtg
     7261 gaaccagtgg cccgaggtgg tctggcgcga ccggcgggcg gacaagttca tcggggactc
     7321 gccgcacacc tgggtcggct cggatttcct tcgctccgcg gccgacctgt tcgtctatga
     7381 gcgcgaggcg gacagcgcgc tggtggtcag tgccgggatc gccgaggagt ggctcaccgg
     7441 cgagggagtc cgggtgcggg gcctcagcac ctggtggggt tcgttgacct accaagtgcg
     7501 actggaaggc agcacggtgc gacttcggtt cgagccgggc ctgcggctgc cgcccggagg
     7561 cctggtggtg aagtctcccg gtgctgtggt tccacgccag gttcgagtcg atggccggga
     7621 gatgcgaccg accgccgcgg gcgaagtgat cctccgggtg cttcccaccg agctggtctt
     7681 cgtgcgttga tggtggacgc acccgagcta tccaacgggt cctatcgggt ccggctgagt
     7741 gataccggcg gtggttactc ggcctggcgt gacctggcgc tgacgcgctg gtcggccgac
     7801 tgggccgccg aggtacaggg cttcttgctc ctgatccgga acatcgacca ggggcactgg
     7861 tggtgggtag gaagctcgca ggacaggagc tgcctcgtca ccacccggct cgaggtggcg
     7921 gtggcgcccg acgcggacat cgagctgagg cggctgacgg tgggcaacag cgcgagcacg
     7981 gcccagcgac tggagctcac cagctatgtg gaagtggctt tgaatcaccc agccgccgac
     8041 gcgggcca
//
LOCUS       DASWKS010000599         1898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2201270, whole genome shotgun sequence.
ACCESSION   DASWKS010000599 DASWKS010000000
VERSION     DASWKS010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2201270"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..>1898
                     /locus_tag="VGA78_17165"
     CDS             150..>1898
                     /locus_tag="VGA78_17165"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX9895664.1"
                     /translation="MPHRGLWLVLTLAVGCAPSASQSSGEHEVAAWEGQAQNVTIIRD
                     EWGIPHIHGKTDADAVFGLMYAQAEDDFNRVETNYLNAMGRLAEAEGESAVYRDLRMK
                     LFIHPDSMKRMYQTSPEWLRRLMNAWADGLNFYLHKHPEVTPRVIQRFEPWMALSFSE
                     GSIGGDIEQVSLKQLEAFYGRTGTSQSPDEKDTGEAEPAGSNGFAIAPGNTAARRALL
                     LINPHTSFFFRAEVQVASDEGLNAYGAVTWGQFFVYQGFNERAGWMHTSSGVDNIDEY
                     LETVVRKDNGYFYRYGQEDRPVDSARITVPYRAGTGMASKVFTVYRTHHGPVVREADG
                     KWVTVRLMEEPLKALTQSYSRTKALNYQAFRQTMELHTNSSNNTIFADAEGNIAYFHA
                     NFVPRRDPRFNWNRPVDGSDPATEWNGVFRVEESPHLLNPGTGWLYNTNNWPYSAAGA
                     NSPRKADYPAYMETGSENARGLHAIRVLEGRKDFTLTSLIAAAYDSYLTAFEPLIPAL
                     LKAWDQTAATSPLKSELAEPVAALRAWDLRWSETSVATTLAIAWGEEMGRRVAAAARR
                     AGVSIEEYIATRATPEQ"
BASE COUNT          377 a          627 c          606 g          288 t
ORIGIN      
        1 cgttctgggc ctgcccggcg gggtggagat tatgctttat gaaccacgcc acccagttgc
       61 gatcggcctg tcagacaagt agcgctggca aagcaaccca ggaccagata ctctaactca
      121 tgcccatcca ttacatcgag ccgcggcccg tgccacaccg cggcctctgg ctcgttctca
      181 ctctggccgt aggatgcgcg ccgtccgcat cccaatcatc cggggagcat gaggtcgcgg
      241 cctgggaggg gcaagcccag aacgttacca tcatccggga cgaatggggc attccccaca
      301 tccacggcaa gaccgacgcc gacgccgtct tcgggttgat gtacgcccag gccgaggacg
      361 acttcaaccg ggtcgagacc aactacctca acgcgatggg gcggctggcg gaagcggaag
      421 gcgagtccgc ggtgtatcgg gatctgcgca tgaagctgtt catccacccg gacagcatga
      481 agcggatgta ccagaccagc cccgaatggt tgcggcgcct gatgaacgcc tgggcggatg
      541 gcctgaactt ctacctccac aagcatcccg aagtcacgcc ccgggtcatc cagcggtttg
      601 agccgtggat ggccctgagc ttcagcgaag gcagcattgg cggcgacatc gagcaggtgt
      661 ccttgaagca actggaggcg ttctacggca ggaccggcac gagccagagc cccgacgaga
      721 aagacaccgg cgaggcggaa ccggccggat cgaatggctt tgccatagcg ccgggaaaca
      781 cggccgcccg gcgagccctg ctgctgatca atccgcacac ctcgttcttc ttccgggccg
      841 aagtacaggt ggcgagcgac gaaggcctga acgcctacgg cgccgtgacc tggggccagt
      901 tcttcgtcta tcagggattc aacgagcgcg ccggctggat gcacacctcc agcggggtcg
      961 acaacatcga cgaatacctg gaaaccgtgg tgcggaagga caacggctat ttctaccgct
     1021 acgggcagga agaccgcccg gtggactcgg cccggatcac ggtcccctat cgggccggta
     1081 ccggcatggc gagcaaggtg ttcacggtgt accggaccca tcatggaccg gtggtgcggg
     1141 aggccgacgg gaagtgggtg accgttcgcc tgatggagga gccgctcaag gctctgaccc
     1201 agtcctactc ccggaccaag gccctgaact accaggcgtt ccgccagacc atggagctcc
     1261 acaccaactc gtccaacaac accatcttcg ccgatgccga gggtaacatc gcctacttcc
     1321 acgccaactt cgtcccccgg cgcgaccccc ggttcaattg gaatcgcccg gtggacggca
     1381 gcgacccggc gacggagtgg aacggggtgt tccgcgtgga ggagagcccc cacctgctga
     1441 accccggcac cggatggctc tacaatacga acaattggcc ctactccgcg gccggcgcca
     1501 acagtccccg gaaggccgac tacccggcct acatggagac cggcagcgaa aacgcgcggg
     1561 gcctccacgc catccgggtg ctggaaggca ggaaggattt cacgctgacc tcgctcatcg
     1621 cagcggcgta tgacagctac ctgacggcgt tcgagccact gattcctgcc ctgctcaaag
     1681 cctgggatca gaccgccgcg accagtccgc tcaaatcgga gctggccgag ccggtcgcgg
     1741 cgctccgggc gtgggacctg cgctggtcgg agacctcggt cgccaccacg ctcgcgatcg
     1801 catggggtga ggagatggga cggcgggtgg ccgccgcggc ccggagggcg ggtgtctcca
     1861 tcgaggagta catcgccacc cgggcgacgc cagaacaa
//
LOCUS       DASWKS010000600         5081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2544832, whole genome shotgun sequence.
ACCESSION   DASWKS010000600 DASWKS010000000
VERSION     DASWKS010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5081
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2544832"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..557
                     /gene="rpsT"
                     /locus_tag="VGA78_17170"
     CDS             312..557
                     /gene="rpsT"
                     /locus_tag="VGA78_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEX9895665.1"
                     /translation="MPRTRAAKKHQRQTKTRTAVNRAQRSELRTAVKKVRSAATAEER
                     QAAYQTAQQLLDRAGRKNIIHRNTAARTKQRLAKLVK"
     gene            complement(704..1711)
                     /locus_tag="VGA78_17175"
     CDS             complement(704..1711)
                     /locus_tag="VGA78_17175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895666.1"
                     /translation="MSDVTPEATAEIEALLADRQRLQEWLDRLESTAERAPAGVRQRV
                     RADYEGRLTEVVARLRGYSTALSASLAALRTHRADYQSQRTEVEEARAEAELRHAVGE
                     YSDEDWTRLESDAGQRINAFTVEIDRLSAEISRLEDVLSQVSPPQERARPQAPPPQPR
                     PAPRQPAPAPHQEERLEIHVLERDEITLTARGPQGTDDSQNVVTLDPDHMDDIEAIRP
                     ETPRPTPIEAPRFTPKSGPEHRPPTRVPTAPRTLRFPAPPIPEIPSAPSVDEMTFLKS
                     VTLDSPASRERSAAENRPSAPPKGRGAGASKTLKCAECGSMNRPTEWYCERCGAELAA
                     L"
     gene            complement(2058..3338)
                     /locus_tag="VGA78_17180"
     CDS             complement(2058..3338)
                     /locus_tag="VGA78_17180"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX9895667.1"
                     /translation="MRPLLIRGGRVIDPSRGSDGIADVYVAEGRIEAVGRNIAPGDDA
                     EVLEAAGKVVAPGFIDLHVHLREPGQEDLETVDSGAMAAAAGGFTTVCAMPNTDPVTD
                     NQAAVGFIVRQSIRAGKARVRPIGAISLGQKGQQLAEFGEMVGAGAVAVSDDGKPVVS
                     SHLMRTALEYAQVFGIPVADHCEDPTLSAGGSMHEGLVSTRLGLKGIPAAAEEIMVAR
                     NILLAELTGGHIHLCHMSTRGSVALIRRAKEQGLRVTAEATPHHFSLTHDRVGNYDTN
                     AKMNPPLRESADRAAIRDGLKDGTIDVIATDHAPHHYDAKEREFDEAPNGIIGLETAL
                     GLGLRELVRPGLLSLPELINLMSTRPARVFRLPGGTLATGAPADVVVFDPEARWTVVP
                     ERFYSKSRNTPWAGEEMVGRVALTLVDGRAVFRV"
     gene            complement(3335..4294)
                     /locus_tag="VGA78_17185"
     CDS             complement(3335..4294)
                     /locus_tag="VGA78_17185"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX9895668.1"
                     /translation="MALLGKDLVGLEYLTREQIQFILDTAEPFKEVSERPIKKVPALR
                     GKTIVNLFFEASTRTRISFEFAEKRLSADTVNVAVQGSSVSKGETLVDTARNLEAMRI
                     DMVVIRHPASGAARFLGERIRSNVINAGDGKHEHPTQGLLDLLTLRDKFGRLEGLKVA
                     ICGDVLHSRVARSNIWGLLRLGAEVAVCGPPSLLPRHVGELGVTVFHRIEDAIQWADA
                     LNVLRLQLERMQAGFIPSLREYNRVFGVTSERLARAPGDLVILHPGPMNRGVEIDSDV
                     ADGPHSVILPQVTNGVAVRMAVLYLLAGGSPDWAHQSTRGDER"
     gene            complement(4294..4830)
                     /gene="pyrR"
                     /locus_tag="VGA78_17190"
     CDS             complement(4294..4830)
                     /gene="pyrR"
                     /locus_tag="VGA78_17190"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEX9895669.1"
                     /translation="MPTSRLLDEPGMGRALQRMADEVIQRCGGGDPPLLVGIQRRGVY
                     LADRLAALLGPRIGPVRLGKLDITLYRDDLQQIGPRPIVGETSLPPDINGQTCVIVDD
                     VLYTGRTIRAALDEFADFGRPRRIMLAVLVDRGGRELPIQPEVVGMTVETGPHDRVDV
                     AVRELDGFDAVDLVRGEG"
BASE COUNT          815 a         1710 c         1699 g          857 t
ORIGIN      
        1 gcgatgggaa tgtcggaaat gtcgagctgc tcttcccgga gcaggtgcaa cagcaggtcg
       61 agcggccccg tgaacgactc cagctcgacg acaaacgcgg tgtcaccggc gatgccgagc
      121 gacggggcct cgggaagagt catctattcg gggtcctcca tctggcccag cgggagttag
      181 cgggagcaat aaagggcacc gcagcggcaa aatcaatggc acacttgcac ttgggcgttt
      241 gagcccttag ctttttcggc tctgtcggga gtagcattcc cggccatcag acaccgacga
      301 tcgaggttgc cgtgccccgt acccgtgccg ccaagaagca ccagcgccag accaagacca
      361 ggaccgccgt caaccgggct cagcggagcg agctccggac cgcggtgaag aaggtccgca
      421 gcgcggccac ggcggaagag cggcaggccg cctatcaaac ggcgcagcaa ctgctcgatc
      481 gggcgggtcg caagaacatc atccatcgga ataccgccgc ccggaccaaa cagcggctgg
      541 cgaagctcgt caagtaagac agggagcaag gactagggag cagggagcag ggaccaggtt
      601 ctctcaatca attcggggct ccgacctcat cggagccccg ttgatttcct gcttcctgct
      661 ccctgctccc tgctccctgg ttcctgctcc ctggttcaga tgtttagagt gccgcgagct
      721 ccgccccgca ccgttcacaa taccactcgg tcggccggtt catcgagcca cattcggcgc
      781 acttgagcgt cttgctggcg ccagctcctc gtcccttggg gggagctgac gggcgattct
      841 cggcggcgct gcgttcccgg ctggccgggc tgtccaacgt cacggacttg aggaacgtca
      901 tctcgtccac cgatggggcg ctggggatct cggggatcgg cggagccggg aaccgcagcg
      961 tcctcggtgc agtcggaacc cgggtgggcg ggcggtgctc cggcccgctc ttgggggtga
     1021 accggggagc ctcgatcgga gtgggccggg gcgtttcggg ccggatggct tcgatatcgt
     1081 ccatgtggtc gggatcgagc gtcacgacgt tttggctgtc atcggtgccc tggggaccgc
     1141 gggccgtcag ggtgatctcg tcgcgctcca gcacgtggat ctcgagccgc tcttcctggt
     1201 ggggcgccgg ggccggttgc cggggagcgg gacggggctg gggcggcggc gcctggggtc
     1261 gggcccgctc ctggggcggc gaaacctggg agaggacgtc ttccaaccgg gagatctcgg
     1321 ccgatagccg gtcgatctcc accgtgaagg cattgatccg ctgcccggcg tcggactcca
     1381 accgggtcca atcttcgtcc gagtactcgc ctactgcatg ccgaagctcg gcctcggccc
     1441 gggcttcctc tacctcggtt cgttgggact ggtagtcggc ccgatgggtc cttagtgcgg
     1501 ccaacgaggc agacagggcg gtcgagtagc cccgcagacg agcgacaacc tcggtcaggc
     1561 ggccctcata atcggcacgc acccgttgcc ggacgccggc gggcgcccgt tcggcggtgg
     1621 attcgagccg gtccagccac tcctgcagcc gctgccggtc ggcaagcagg gcttcgatct
     1681 cggcagtggc ttcgggggtt acgtcgctca tagctctcct gcagggtgct ccgggcggaa
     1741 gctcctgcag gcataatcta atgaatcgcg tcaatcggga aacgtgttac gtgatggggc
     1801 gttcgaatct ttgacagcgc gccgctgcaa cgggggcggg gcacaggggc cgagcacagg
     1861 ttcctggttt cgggttccag gtgccgggtg tggtgcttcg tgcggtgcta cgtgcccagt
     1921 gctgcgttcg tcgccgtggc tctaccgacg aggtaatgcc ggcatcacac ctggcactcg
     1981 ggaccatggc actgcacctg gcaccgcacc cagcaccgca ctcggcacct ggaacccgga
     2041 acccggaacc aggaacgcta gactcgaaac accgccctgc catcgaccag cgtcagcgcc
     2101 acccgtccca ccatctcctc cccggcccac ggcgtgttcc gactcttcga gtagaaccgc
     2161 tccgggacta cggtccagcg agcctcagga tcgaagacca ccacatcagc cggcgcgccg
     2221 gtggccagcg tcccgcccgg aaggcggaag acccgggctg gccgggtgct catgaggttg
     2281 atcagttcgg gaagcgacag cagcccgggt cgtaccagtt cccgcaggcc gagacccagc
     2341 gcggtctcga gcccgatgat cccgttcggc gcttcgtcga actcgcgttc cttggcatcg
     2401 tagtgatggg gtgcgtgatc ggtggcgatc acgtcgatgg tgccatcctt caatccgtcc
     2461 cggatcgcgg cccgatcggc gctctcgcgc aggggcgggt tcatcttggc gttggtgtcg
     2521 tagttgccca cccgatcgtg ggtcaggctg aaatggtggg gcgtggcctc ggccgtgact
     2581 ctgagtccct gctccttggc ccggcgaatc agcgccaccg acccgcgggt cgacatgtgg
     2641 cagagatgaa tatgcccgcc ggtgagctcg gccagcagaa tgttacgcgc caccatgatc
     2701 tcttccgcgg ccgccgggat gcccttgagt cccagacggg tggagaccag gccttcgtgc
     2761 atcgagccgc cggccgacag ggtcggatcc tcgcaatggt ccgcaaccgg aatcccgaac
     2821 acctgggcgt actcgagcgc ggtccgcatc aggtggctcg acaccaccgg cttgccgtcg
     2881 tcgctcaccg ccaccgcgcc ggccccgacc atctccccga actcggccag ctgctggccc
     2941 ttctggccca gcgagatggc gccgatggga cgcacccgcg cctttccggc ccgaatcgat
     3001 tgccggacga tgaaccccac cgcggcctgg ttgtccgtca ccggatcggt gttaggcatg
     3061 gcgcagaccg tggtgaagcc gccggccgcc gcggccatgg caccgctgtc caccgtttcc
     3121 aggtcttctt gtcccggctc gcgcaggtgc acgtggagat cgatgaaccc gggcgccacc
     3181 accttcccgg cggcctcgag cacttccgcg tcatcacccg gcgcgatgtt gcggcccacc
     3241 gcctcgatcc gtccctcggc cacatacacg tccgcgatcc cgtcgctgcc acgcgaggga
     3301 tcgatcaccc gcccgccccg gatcaggagc ggcctcaccg ctcatctccc cgggtgctct
     3361 ggtgggccca gtcgggcgac ccgccggcca gcagatacag caccgccatc cgcaccgcca
     3421 caccgttggt cacctggggc aggatcacgc tgtggggtcc gtcggcgacg tcgctgtcga
     3481 tttcgacccc ccggttcatt ggccccggat gcaggatcac caggtctccg ggcgcgcgag
     3541 ccagccgctc gctggtgacc ccgaacaccc ggttgtattc gcgcagcgat gggatgaagc
     3601 cggcctgcat ccgctccagc tgcaaccgaa gcacgttgag ggcgtcggcc cactggatgg
     3661 cgtcctcgat gcgatgaaac accgtgacgc cgagctcgcc gacgtggcgc ggcagcaggg
     3721 acggcggccc gcatacggcc acttccgcac ccagccgcaa cagtccccag atattgctcc
     3781 gtgcgacacg gctgtgaagc acgtcgccgc agatggccac cttgagtcct tccagccgcc
     3841 cgaacttgtc ccgcagcgtg agcagatcga gcaggccctg ggtgggatgc tcgtgcttgc
     3901 cgtcacccgc attgatcacg ttggaccgga tccgctcgcc caggaaccgg gccgcacccg
     3961 aagccgggtg tcggatcacc accatgtcga tccgcatcgc ttccaggttg cgcgcggtgt
     4021 cgaccagcgt ctcgcccttg ctgacggagg agccctgcac cgccacgttc acggtatcgg
     4081 ccgagagccg cttctcggcg aattcaaagg aaatccgggt ccgggtcgag gcttcgaaaa
     4141 aaagattgac gatggtcttg ccgcggaggg ccggcacctt cttgatgggc cgttcgctga
     4201 cttccttgaa tggctcggcg gtatcgagaa tgaattggat ctgttcgcgg gtgaggtatt
     4261 ccaggccgac caggtccttg ccgagcaggg ccatcagccc tctcctcgca ccaggtcgac
     4321 ggcgtcgaag ccgtccagct cccgtaccgc cacatcgacc cggtcgtggg gcccggtctc
     4381 caccgtcatc ccgaccacct cgggctggat cggaagctcg cgcccgcccc ggtcgaccag
     4441 cacggccagc atgatgcggc gggggcggcc gaagtcggcg aactcgtcca gcgcggcccg
     4501 gatggtgcgg ccggtgtaga gcacatcatc cacgatgacg caggtctggc cgttgatgtc
     4561 gggcggaagg ctggtctccc ccacgatggg gcggggaccg atctgctgca ggtcgtcgcg
     4621 atagagcgtg atgtcgagtt tgccgaggcg caccggcccg atcctgggtc cgagcagggc
     4681 ggcgagccgg tcggccagat agacgccccg gcgctgaata cccaccagaa gcggcgggtc
     4741 acccccgccg caccgctgga tgacttcgtc ggccatgcgt tggagcgcac ggcccattcc
     4801 cggttcgtcc aacaggcgag aagtcggcat gcagcgccgc tcattctagc gggggtgagg
     4861 ggggtctaca agcggcgttc cgggttccgg gttcctcgtg ccaggtgcgg tgcaccgtgc
     4921 ggtgctgggg gccatagtgc acggtgcggt ccggtggggc tggacacggt gcagacgctg
     4981 gcaggcgggg ggggacgaac cacgcctcat cctgagcgaa acgaaggatc gagtccatgc
     5041 caagcagatt ctcgcttcgc tcaggatgac aatagggcgc t
//
LOCUS       DASWKS010000601         2905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_313886, whole genome shotgun sequence.
ACCESSION   DASWKS010000601 DASWKS010000000
VERSION     DASWKS010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313886"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VGA78_17195"
     CDS             complement(<1..553)
                     /locus_tag="VGA78_17195"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9895670.1"
                     /translation="MAAAVAPLSLTSRPVAIVTAASRGIGAACARELSRRGYALGLMS
                     RSDDLQSVATELDAVAVTGSVKREEDLRRLVEATLERYGRIDGVVNNSGHAPKGELVE
                     LTDQDWQGGFELLVLNVVRVARLVTPTMLAQRSGSIVNLSTFGAVEPSLRFPVSSVLR
                     ASLGAYARLFTQRYAGSGLRMNNV"
     gene            complement(529..1065)
                     /locus_tag="VGA78_17200"
     CDS             complement(529..1065)
                     /locus_tag="VGA78_17200"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX9895671.1"
                     /translation="MSTPGHSAGVSRAHPRLAAVLLAGRSLLWALLLPGFFAGYLPWR
                     YFGLREVVLDFGNALHWIGLMAIGLGAGLLALCIFEFARRGRGTLSPVDPPRHLVVEG
                     LYRSVRNPMYLSVTLIVLGEVVLTRSRGLFAYWAIWFLLVNLFVMGYEEPTLRREFGS
                     AYEAYSAKVGRWLPRLRP"
     gene            complement(1062..2636)
                     /locus_tag="VGA78_17205"
     CDS             complement(1062..2636)
                     /locus_tag="VGA78_17205"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX9895672.1"
                     /translation="MARQSPSPGRAKGVAASGPAGRRRSARRPSTPAAGLRALVEDSD
                     EGMILADENGMILYANGAAERVLGYPAAELVGRIGFELVEPEHLRVAQEGFGRCLANP
                     DLAVAFDVVVRHRDETSRPIAVKLVNRLAVPGVNAVVVHFREVSPGAPTRDLALEPAD
                     NYRTLFYNAPVGLGVADLDGTLLAFNDAMLQPGGYSREDIQRLGNVARLYCHATERDR
                     VLELARSQGRVWREEVQFRRKDGSCYDTLLSLTPVQYGGRSCWYAAVEDITGRKQVEE
                     RQRQLEGRLRQAQKMEAVGNMTAGISHDFNNILSVITMSADLMAEALEREETHLRDHV
                     ADLQEAAQLGAATVRKLLAFSRHADLHREPIDLTEVVSGLHTMVRRLAPEPVRLDIKV
                     VPGAVADVDPSALEQMVLNLVTNACDAMPGGGRLTIEAAPMVLSAAERPGEWMEPGPY
                     ARVMVTDTGIGMDPRTRARAFEPFFTTKRAGAGTGLGLAMVYGLVKQQEGFVDLQSEV
                     GTGTSVSLYFPRRAEG"
BASE COUNT          503 a         1011 c          941 g          450 t
ORIGIN      
        1 gcacattgtt catccgaaga cccgacccgg cgtagcgctg ggtaaacagc ctggcgtagg
       61 ctccgaggga agcgcgcaga accgacgaca ccgggaaccg gagggacggc tcgaccgcgc
      121 cgaaggtcga caggttgacg atcgacccgc ttcgctgggc gagcatggtc ggggtgacga
      181 gccgcgccac ccggacgacg ttgagcacaa ggagctcgaa tccgccctgc caatcctggt
      241 cggtcaactc gaccagttcc cctttggggg catgcccgct gttgttcacc accccatcga
      301 tgcggccgta ccgctcgagc gtcgcctcca ccagccggcg caggtcttcc tctcgcttga
      361 ccgaaccggt gaccgcgaca gcgtctaact cagttgccac cgattgcagg tcgtccgacc
      421 gggacatgag gccgagggcg tacccgcggc gggacagttc gcgggcgcag gccgcaccga
      481 tgcctcggct cgcggcggtc acgatggcaa ccgggcgact ggtcaagctc aggggcgcaa
      541 ccgcggcagc catcgtccca ccttcgccga atacgcctcg taggcgctcc cgaactcccg
      601 gcgcagcgtg ggctcctcat accccattac gaagagattg accagaagaa accatatcgc
      661 ccagtaagca aacaatccgc gcgatcgagt gagcacgacc tcacccagca cgatgagtgt
      721 gacgctcagg tacatcgggt tccggacgga gcgatagagt ccctcgacca ccaggtggcg
      781 gggagggtcc actggtgaca gcgtgccgcg gccgcgccgg gcgaactcga agatgcagag
      841 cgccaggaga ccggcaccca gcccgattgc catcaggccg atccagtgga gggcgttgcc
      901 gaaatcgagg acgacctccc gaagtccgaa gtaccgccag gggagatacc ccgcgaagaa
      961 tcccggcagc aggagggccc agagcaggct ccgcccggcc aggagaaccg cggccaggcg
     1021 agggtgggcc ctggagaccc cggcagaatg acccggagtg ctcacccctc tgccctcctg
     1081 ggaaagtaga ggctgacgct ggtacccgtg ccgacctcgc tctgcagatc cacgaatccc
     1141 tcctgctgct tgaccagtcc gtagaccatg gccagcccca gcccggtccc ggcgccggcc
     1201 cgcttggtcg tgaagaaggg ctcgaacgcc cgcgcccgag tccgcgggtc catcccgatg
     1261 ccggtatcgg tgaccatgac gcgggcgtag ggacccggct ccatccattc acccggcctt
     1321 tccgccgccg acagaaccat cggtgcggct tcaatggtga ggcggcctcc gcccggcatg
     1381 gcatcgcagg cgttggtcac caggttgaga accatctgtt ccagggccga gggatcgaca
     1441 tcggcgacgg ccccggggac gaccttgatg tcgagacgta ccggctcggg cgccagtcgc
     1501 cttaccatgg tgtgaagccc gctcaccacc tccgtcagat cgatgggctc acggtgcaga
     1561 tccgcgtgac ggctgaacgc cagcagcttt cgcaccgtgg ccgctcccag ctgcgcggcc
     1621 tcctgcaagt cggccacgtg gtccctgaga tgggtctcct cccgctccaa cgcctcggcc
     1681 atcaggtcgg cactcatggt gatgaccgaa agaatgttgt tgaagtcgtg ggagatgccc
     1741 gcggtcatgt tgcccaccgc ctccattttc tgggcctggc gaagtcggcc ttccagttgg
     1801 cgctgccgct cttcgacctg cttgcgcccg gtaatgtcct ccaccgcggc gtaccagcag
     1861 gaccggccac catactgcac cggcgtcagg ctgagcaggg tatcgtagca ggagccgtcc
     1921 ttgcgcctga actgcacctc ctcgcgccag acgcggccct gtgatcgggc cagctccagt
     1981 acccgatctc gctcggtcgc gtggcaatac aggcgcgcca cgttccccag ccgctggatg
     2041 tcctcccggg agtatccgcc gggctgcagc atggcgtcat tgaaggccag cagggtccca
     2101 tccagatcgg ccacgccgag cccgaccggg gcgttgtaga acagggtgcg gtagttatcg
     2161 gcgggttcca gggcgaggtc tcgcgtcggg gcgccgggtg agacttcacg gaagtgcacc
     2221 accacggcgt tgacccccgg gacggcgagc cggttcacca gcttgacggc gatggggcgg
     2281 gaggtctcgt cccgatgcct gacgaccacg tcgaacgcca cggccaggtc cggattcgcc
     2341 aggcaccggc cgaatccctc ctgggcaacc cgcaggtgct ccggctccac cagttcgaag
     2401 ccgatccggc ctaccagctc ggcggcgggg taacccagta cccgttcggc tgctccgttg
     2461 gcatagagaa tcatgccgtt ctcgtcggcg aggatcatac cctcgtcact gtcctccacc
     2521 agagcccgaa gccccgcggc gggggtgctc gggcgccggg ctgagcggcg ccggcccgcc
     2581 ggcccggacg cggcaacgcc ttttgcccgt cctgggctcg gcgattggcg tgccatcaga
     2641 caactctcaa gccgacatgc ttccggtgca ctggtacctc gcagggacag gcgacaccca
     2701 tgcttcgtgt gggcgaagac ggccaggctg gcgttccacg gcgcgaaata ccttaccaat
     2761 gttgatagct cgcgcgcgcg gcgccagtgc cgccgtgaga ccgttcgggc ggcgtcacgg
     2821 gctgtccgtt tccaccgacc acgtcgtcgc gccggccata acctggcagg agacgatggt
     2881 ccgcgtcgga gggcaatact gaccg
//
LOCUS       DASWKS010000602         5020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3620443, whole genome shotgun sequence.
ACCESSION   DASWKS010000602 DASWKS010000000
VERSION     DASWKS010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3620443"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..541)
                     /locus_tag="VGA78_17210"
     CDS             complement(<1..541)
                     /locus_tag="VGA78_17210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895673.1"
                     /translation="MSLPVLALLAVLLFLVPAALLAQSEAPPVLSEAEEIRLARSGAP
                     PEVTKAATVLVLRNGKYVEAVKGSGDVTCLVNRSQPLSLEPECYDGEASITVLPIHRF
                     QTEQRIAGTPKSEIDARVDERLRSGEFRLPRRPALVYMMSAAQVLYNDNGQKVGPWLP
                     HLMWYFPYLKAADLGLPAAN"
     gene            complement(1044..2048)
                     /locus_tag="VGA78_17215"
     CDS             complement(1044..2048)
                     /locus_tag="VGA78_17215"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HEX9895674.1"
                     /translation="MSRFDTALTRQAGIEVPLICGAMYPCSNPELVAAVSEAGAIGIV
                     QPISLTYVHGHEYREGLRLIRRLTSRPIGLNALIEASSQAYHQRMVRWVNVALEEGVR
                     FFITSLGNPRWVVDAVKPAGGVVYHDVTERKWALKGLQGGVDGLIAVNDRAGGHAGPK
                     SAELLLEELGDLGVPLVCAGGVGSPEDFARALDLGYAGVQMGTRFIATTECRASDAYK
                     QAILRARESDIVLTERITGVPVSVINTPFIQRIGTRAGPLARWMLRGRRTKRLMRSLY
                     ALKSLWQLKHASLDESGEKDYWQAGKSVAGIESIEPAGDIVRRFALAVGNVGRVGKVG
                     "
     gene            complement(2045..2524)
                     /locus_tag="VGA78_17220"
     CDS             complement(2045..2524)
                     /locus_tag="VGA78_17220"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold domain-containing protein"
                     /protein_id="HEX9895675.1"
                     /translation="MAFPSPGSRVRALWDRVAPLPGGTWIFSRLLSFMVPYTGTVGAH
                     VRELRPGYARITLRDRRRVRNHLDSIHAVALANLGEVTSGLAMVTGLPPGVRGIVTGL
                     SIEYFKKARGTLTAESTPTIPPALSESTEATVTADIRDHTGDVVARTAVRWRLSPPA"
     gene            complement(2549..3079)
                     /gene="msrA"
                     /locus_tag="VGA78_17225"
     CDS             complement(2549..3079)
                     /gene="msrA"
                     /locus_tag="VGA78_17225"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX9895676.1"
                     /translation="MTELATLAGGCFWCLEAVFERLKGVERVVSGYIGGKLPDPDYTL
                     VCSGTSGHAEAVQISFDPGVISYRTLLELFFAFHDPTTLNRQGPDVGTQYRSAIFTHS
                     AAQKAEAEAVIRELTADATFDAPILTEVTPAPTFYPGEGYHQQYYQRNQWQPYCMAVI
                     SPKVSKLRSAYASLLR"
     gene            complement(3120..3560)
                     /locus_tag="VGA78_17230"
     CDS             complement(3120..3560)
                     /locus_tag="VGA78_17230"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEX9895677.1"
                     /translation="MCGVVAAIWIKRAHRGPMDPVREADLVPGGGLAGSADRGGKRQV
                     TLIEQEVWDDLMRETAGAIDPSARRANLLVKGMSLSDSRGKVLRVGDCRLRIHGETRP
                     CEQMDQALPGLREAMGRPWGGGAFAEVVAGGRIRVGDEVGWEPQ"
     gene            3676..4914
                     /locus_tag="VGA78_17235"
     CDS             3676..4914
                     /locus_tag="VGA78_17235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895678.1"
                     /translation="MPQSRAGLSAVMLSLAIAACHDGTIPTSPDQTPRPRVESVEPAA
                     LVSSVPGFGGFFLENGRPTIYLTDAGEAAHATGVLEGFLQASGIGQGELQVRRAEFEW
                     AELERWFADAIPAAFQVDGTVLVDLDEAQNRIRIAVDRPGAIGLVRAALVRAGIPERA
                     LVIDQTEPLLRMATLRDRVRPIVGGLQINFPGFLCTLGFNATSGTQASFITASHCTDT
                     QGGNDATPYWQPLQTVDPVQIGTEVADPAYQRNIAGCPRGRRCRRSDAARVAYAGGIQ
                     FTRGQIATTSGPNNGSLTITGNRTISGEDLRTNFTVGETLNKTGRTTGWTAGEVTTTC
                     ATIGVSGTNIVQICQTVVTRSGAVLVQGGDSGSPVFRVTGGNSFLAGILWGGNGSGSQ
                     FVFSPLANVEAELGGLTTTP"
BASE COUNT          829 a         1686 c         1673 g          832 t
ORIGIN      
        1 cgttggctgc gggcaggccc aggtcggccg ccttcaggta cgggaaatac cacatgaggt
       61 gaggcagcca ggggccgact ttctggccgt tgtcgttata gagcacctgc gcggcggaca
      121 tcatgtacac cagggccggg cgtcggggca gccggaactc gccggaccgg agccgctcat
      181 ccacccgggc gtcgatttcc gatttcggtg tgccggcgat ccgctgctcg gtctgaaacc
      241 ggtggatcgg caacaccgtg atcgaggctt ccccgtcgta gcactccggt tcgaggctca
      301 agggctgact ccgattcacc aggcaggtca cgtctccgga gcccttcacg gcctcgacgt
      361 acttgccgtt cctgagaacc aatacagtgg cggctttcgt gacttcgggc ggagcgccgc
      421 tccgggccag gcggatctcc tcagcttcgg acaacacggg tggggcctcg gactgggcga
      481 gcagagcggc gggaacgagg aagagcagga cggccagcaa ggcgagcacc gggagactca
      541 ctgtgggggt cgccggtgag tgaccggact ggggtgaaag gttgcatcca gcctcgccct
      601 ggtcgttccg gagtttcgcg ccttcgcctt ctggtagtgg atggtcgggt cgcggttgag
      661 cccccgctgc tgctggatgg ccggcgagct tcccgggatg ggaccgccca gtgccatgcg
      721 gagaccgcgc catttggtct tgaggtcggc ccagaaatgc gacgggacga tactcctagg
      781 cgcgataccg gcccggagtc accttgccct tccgggcgac gtgcttcgcg aacccgtcgg
      841 tccaggcgtc gaactcgcgc agcaccgcgg gctggtccac catgtgctcg gctcggatct
      901 ctcttgaacc cttcgccctg ctcggtccgg ccgatccgca ccaggcgcga gcgctgctcc
      961 accggcaggg gccgcagcag gagcgcgttg gcgaggctga agatgacgac gttggcccca
     1021 atgccgaggg cgcaatcgga aggtcatccg acctttccga cccgcccgac gtttccgacc
     1081 gccagtgcga accgccgcac gatgtcgccg gccggctcaa tgctctcgat ccccgcaacg
     1141 ctcttgccgg cctgccagta atccttctcg ccgctctcgt ccagcgaggc gtgcttgagc
     1201 tgccagagcg acttgagcgc gtacagcgat cgcatcagcc gtttggtccg gcggccccgg
     1261 agcatccagc gcgccagggg tcccgcccgg gtcccgatgc gctgaatgaa gggcgtgttg
     1321 atcaccgata cgggcacgcc ggtgatccgt tcggtgagca cgatgtccga ctcacgggcc
     1381 cgcaggatcg cctgcttgta ggcgtcgctg gcgcggcatt cagtggtcgc gatgaaccgg
     1441 gtgcccatct gcaccccggc gtaccccagg tccagcgcgc gggcaaagtc ttccggcgag
     1501 ccgaccccgc cggcgcacac caggggcacg cccaggtctc ccagctcctc gaggagcagc
     1561 tcggcggact tgggcccggc gtggccgccg gctcgatcgt tcaccgcgat cagaccgtcg
     1621 accccaccct gcaggccctt gagggcccac ttgcgctcgg tgacatcgtg gtacaccacg
     1681 cctccggccg gtttcaccgc gtccaccacc cagcggggat tgcccagcga cgtgatgaag
     1741 aaacgaacgc cctcttcgag agcgacgttg acccagcgga ccattctctg gtggtaggcc
     1801 tgcgatgagg cttcgatcag cgcattgaga ccgatgggcc gcgacgtcaa gcgccggatg
     1861 agacgcaggc cttcgcggta ttcgtgtcca tgcacatacg tcaacgaaat gggctggaca
     1921 atgccaatgg cgcccgcctc cgagacggcc gcgaccagct cgggattgct gcagggatac
     1981 atggcgccgc agatcagcgg cacctcgatc ccggcctggc gcgtgagcgc ggtatcaaac
     2041 cggctcacgc cggagggctc aagcgccagc gcacggcggt ccgggcgacg acgtcgccgg
     2101 tgtgatcgcg gatgtcggcg gtcacggtgg cttcggtgga ctcgctcagg gcaggaggaa
     2161 tggtgggtgt gctttccgcc gtcagggtgc cgcgggcctt cttgaagtac tcgatcgaca
     2221 gaccggtgac gatgcctctg acccctggcg gcaaccccgt caccatggcg agcccgctgg
     2281 tgacctcgcc caggttggcc agggcgacgg cgtggatgga atcgaggtga ttacggaccc
     2341 ggcgccgatc ccgcagcgtg attctggcat agcccggcct gagctcgcgc acatgagctc
     2401 ccaccgtgcc ggtgtaggga accatgaatg acaagagccg gctgaagatc caggtgcctc
     2461 ccggcagcgg cgcgacccgg tcccacaggg cccgcacccg ggagccggga gatgggaagg
     2521 ccatgggact aagatagcgt cagatcgatc agcgaagcag cgaagcgtag gccgatcgga
     2581 gcttggagac tttgggactg atcaccgcca tgcagtaggg ctgccactgg ttgcgctggt
     2641 agtactgctg gtgatacccc tcgccgggat agaaggtcgg cgccggggtg acctcggtga
     2701 ggatgggggc gtcgaaggtg gcgtccgcgg tcagctcccg gatcacggcc tccgcttccg
     2761 ccttctgcgc cgcactgtgg gtgaagatgg ccgagcggta ctgggtgccc acatcggggc
     2821 cttgacggtt gagcgtggtg ggatcgtgaa aggcgaagaa gagctcgagc aacgtgcgat
     2881 acgaaatgac accgggatcg aaactgatct ggaccgcctc ggcgtgcccg ctggtaccgg
     2941 agcacaccag tgtgtagtcg gggtcgggca gtttcccgcc tatgtacccg gagacaaccc
     3001 gctcgacgcc cttcagccgt tcgaacacgg cctcgaggca ccagaaacaa ccgcccgcaa
     3061 gagttgcgag ctcagtcacg agtcactccg tggcatcggg ggttgaaacg catccgacct
     3121 tactgaggtt cccacccgac ttcatcgccc acgcggatcc gccctcctgc caccacttcg
     3181 gcgaaggcgc cgccgcccca gggccggccc atggcttccc gcagacccgg tagcgcctgg
     3241 tccatttgtt cgcagggacg ggtttcgccg tggatccgaa gccggcagtc cccgacccgg
     3301 agcaccttgc cgcggctgtc ggagagggac atccctttga ccagcaggtt ggcccggcga
     3361 gccgaaggat cgatggcccc cgcggtctcc cgcatcagat cgtcccagac ttcctgctcg
     3421 atcagggtca cctgccgttt gccgccccga tccgcactgc cggccagccc cccgcccggg
     3481 accagatccg cctcccggac ggggtccatg gggccccgat gggcccgctt gatccaaatc
     3541 gctgcgacga cgccgcacat ttcgtcctcg ttccgatggc acggtgaatg ctagctcatt
     3601 ctgccggatg gcggagcggg caagttcatg catctttcgt cgttccacag ggaaaactcg
     3661 caaccagagg tcaccatgcc gcagagccgt gcgggcttgt ccgccgtcat gctgtcgttg
     3721 gctatagccg cgtgccatga cgggaccatc cccaccagtc ccgaccaaac cccgagaccc
     3781 cgagtcgaat cggtcgagcc cgccgccttg gtgagcagcg tacccggctt cggcggcttt
     3841 ttcctcgaga atggccgccc caccatctac ctgaccgacg cgggcgaggc cgcccatgct
     3901 accggcgtat tggaagggtt cctccaggcc agcggcatcg ggcagggtga gctccaagtg
     3961 cggcgggcgg agttcgaatg ggcggagctg gaacgctggt ttgccgatgc catcccggcg
     4021 gcattccaag tcgacgggac ggtgctggtg gatctggacg aggcgcagaa ccgcatccgg
     4081 atcgcagtcg accggccggg agccattggc ttggttcgag ccgcgctggt gcgggcgggc
     4141 attccggaac gcgccctggt catcgaccag accgagcccc tgctgagaat ggcgactcta
     4201 cgggaccggg ttcgcccgat cgtgggcggc ttgcagatca atttccccgg cttcctctgc
     4261 accctcgggt tcaacgccac ctcagggacc caggcctcct tcatcaccgc ctcgcattgt
     4321 accgacacgc agggcgggaa cgacgccacc ccatactggc agcccttgca gacggtcgat
     4381 ccggtccaga tcggcaccga ggtggccgac cccgcttacc agcgcaacat cgccggttgc
     4441 cccaggggac gccgctgccg tcgaagcgat gcggcccggg tggcctacgc cggcgggatt
     4501 cagtttaccc gcggccagat cgcgacgacc tccggcccca acaacggctc gctgacgatc
     4561 accggcaacc ggaccatctc gggggaggat ctgcggacca acttcacggt gggcgagacc
     4621 ctcaacaaga ccggtcgcac caccgggtgg actgcgggtg aggtcaccac cacctgcgcg
     4681 accatcgggg tatcggggac caatatcgtc cagatctgcc agaccgtggt gacccgctcc
     4741 ggcgcggtgc tggtccaggg cggcgatagc ggttcgccgg tgttccgcgt gaccggaggt
     4801 aacagcttcc tggcgggcat tctctggggc ggcaacgggt ccggcagcca gttcgtcttc
     4861 agcccgctgg ccaacgtcga agccgagctg ggcggcttga cgaccacccc ttgagcgctc
     4921 ggccgcttct cgaagtggtt ctgctgctcg gagcggtggc ggcgggctgt aatcgttcgc
     4981 ggcccgacgt cagcgcttcg gtcgatacca ccatggtcaa
//
LOCUS       DASWKS010000603         5786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_691020, whole genome shotgun sequence.
ACCESSION   DASWKS010000603 DASWKS010000000
VERSION     DASWKS010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5786
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_691020"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1102)
                     /gene="selA"
                     /locus_tag="VGA78_17240"
     CDS             complement(<1..1102)
                     /gene="selA"
                     /locus_tag="VGA78_17240"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEX9895679.1"
                     /translation="MSDSRRSIPSVDRLLREPGITALLETAPRNVVVAAVRDAVNAAR
                     ARTEGPPADWIAEVRDRVARRSTPSLQPVINATGVVLHTNLGRAPLAPAALAAVQAVA
                     RGYSTLEYDLPSGQRGSRTDHCNRLLAELTGAEEALVVNNAAAALVLALNQVAAGREV
                     VISRGELIEIGGSFRIPDILEKSGAILREVGTTNRTHLDDYAAALSDRSGAILTVHRS
                     NFELRGFVTSPQPSELAALAQRHGLPYLYDIGSGLLADLSAWGLSTEPRVAEAVTCGA
                     DLVLFSGDKLLGGPQAGCLVGRSALVKQSRANAFARAARADKLTLAALEATLTLYHDP
                     EAARAQIPVLRMLTADPRTLAERAHRLAALIPR"
     gene            complement(1095..2414)
                     /locus_tag="VGA78_17245"
     CDS             complement(1095..2414)
                     /locus_tag="VGA78_17245"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX9895680.1"
                     /translation="MRPVAVLLVVLAGCAKIAPPPGGPPDLRPPNLVATRPDSLASYA
                     DFDGDVEFRFDEVVSEGGQPNFGLGSGDLEKLVVLSPSEEVPVVRWRRDRITVHPRGG
                     WRGNTVYRVELLAGVRDLRNNTSRASTVVTFTTGADLPTDSLIGRVVDWSTSRPARQA
                     LVEAVLMPDSLVYRTQADSSGRFRFGPLPRGEYVVYGAIDQNRNSRRESRENFDSIRV
                     QSARDSVGEIWAFRHDSLPPRIQNVARTDSLTATLSFTTHLDPRQRLPADSVRVLRLP
                     DSSAVEVEALLPQQAFDSLYRPRPTAADSARVRAADSLAVRPPARDSAVRIPGVPPRR
                     VVGARPQADTTDRGPLRTKPSLFDKLLLRMKQAWRDSTRYVVIVNGVTTVNGVTGSAR
                     GILEIQARPPALPDSARRDTTGVRPDSSRGDTVRLSVRPSVRPPANE"
     gene            complement(2411..5092)
                     /locus_tag="VGA78_17250"
     CDS             complement(2411..5092)
                     /locus_tag="VGA78_17250"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX9895681.1"
                     /translation="MTASLPPQYNPAQIERDLYQWWLDRAAWRPEATDRRDPFVIMMP
                     PPNVTDRLHMGHGLNLTIQDTLIRFERMRGRGAAWIPGTDHAGIATQNVVERLLGKEG
                     RTRFDLGREAFVERVREYVRETGDTILHQIRGLGASCDWSRTYYTFSDTLSRAVREVF
                     VSWYERDLIYRGKYIINWCPRCLTALSNEEAEKQETTGTLWRIRYPLEGGGHLVVATT
                     RPETLLGDTGVGVHPTDKRYRKLVGKQVKLPLTDRLIPVVADEAVDREFGTGAVKLTP
                     AHDPLDFEIAVRQGLTAIDVLTPEARMAETVPLRFQGLDRFEARKRVVAELEAEGLVE
                     GSEPHTHAIGRCYRCDTVVEPRLSDQWFVRMQRLAEPALQAYRQGVLRFVPERWGPVY
                     EQWLTGIRDWCISRQLWWGHRIPVWYCDGCGTISASRTDIWECGACHSALRQDDDVLD
                     TWFSSQLVPFTSLGWPDRTADLERFYPGHVLVTGPDIIFFWVARMVMAGLDVRGQVPF
                     STVYLTGIVRDTKHQKMSKSRGNGIDPLEVIDRFGADALRYTALSGAAVGTDVILDPD
                     DLEVSFGPGRNFANKLWNAGRFILSNLDGPVRPLAGKYPDVVRRKELALADRWIIARC
                     DAAVRDATQAYERYRLNEAIGTAYHFLWSDLADWYIEQVKPRLYGSQPGGDVARAVLA
                     QVFEVALRLLHPAMPFITETLWKQLPGRAPRASISEAAWPRPDDRATDAEALAGFALL
                     QELVGAVRSIRADYGVQPGRTVRVMVGSPSASVRRAIQAEPGTIERLAKVESLTLHEG
                     DGAARGAGHAVLTDGTKVTVPLGELIDVDRECARLGGELERLTGLIRGQETKLANAQF
                     TSRAPQAVVEREREKLVSWRDQADSLRHKREQLGCTG"
     gene            complement(5089..5535)
                     /locus_tag="VGA78_17255"
     CDS             complement(5089..5535)
                     /locus_tag="VGA78_17255"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEX9895682.1"
                     /translation="MRRLSVRRSNAARDATLGAAGLGLGLVAGFILRGFVGGMDRRRI
                     RTLVGEMTGQHRVPFAMPRQDAIRITAALGDDPLLGGIEFEVVTVRIGQVELHGWVPS
                     RAASARAMRLARSAAPDTEVTNRLKVRGEDDHPGGAGADEEERQPA"
     gene            5586..5741
                     /locus_tag="VGA78_17260"
     CDS             5586..5741
                     /locus_tag="VGA78_17260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895683.1"
                     /translation="MSSLVSEPNAPSGSTWLRWGLVILLILAGIVLALVLGSETEPVV
                     QPETVIR"
BASE COUNT          906 a         1986 c         2020 g          874 t
ORIGIN      
        1 cccgcgggat cagcgcggcc aggcgatggg cccgctcggc cagggttcgg ggatcggcgg
       61 tgagcattcg gagcaccggg atctgggccc gggccgcctc aggatcgtga tagagggtga
      121 gggtcgcctc cagggccgcc agggtgagct tgtcggcccg cgcggcccgc gcgaacgcat
      181 tggcacggga ttgcttcacc agcgcgcttc ttcccaccag gcagccagcc tggggccctc
      241 ccagcagttt gtccccgctg aacagcacca ggtcggcgcc gcacgtcacc gcctcagcca
      301 cccgcggctc ggtgctcaac ccccaggccg acagatccgc cagcagcccg ctgccgatgt
      361 cgtacaggta aggaaggccg tgccgctgag ccagcgcggc cagctcggag ggctggggcg
      421 aagtgacgaa gccgcgcagc tcgaagttgc tgcggtgcac cgtgagaatg gcgccgctcc
      481 ggtcggagag tgcggcggcg tagtcgtcca gatgggtccg attggtggtc ccgacctcac
      541 ggagaatcgc gccgctcttt tccaggatat cggggatccg gaacgagccg ccgatttcga
      601 tcaactcacc gcgggagatt acgacctccc gtcctgccgc cacctggttg agagccagga
      661 ccagcgccgc cgcggcattg ttgaccacta gcgcttcctc ggcgccggtg agctcggcca
      721 acagtcggtt gcagtggtcg gttcggctcc ctcgctgacc cgaaggcaga tcgtattcga
      781 gggtcgagta gccccgggcc acggcctgga cagcagccag cgccgccggg gccagggggg
      841 cccggccgag attggtgtgc agcacgacgc cggtcgcgtt gatcaccggc tggagtgacg
      901 gggtgcttcg gcgggccacc cgatcccgta cctcggcgat ccaatcggcg ggcggaccct
      961 cggtccgtgc ccgggccgcg ttcacggcgt cgcgcaccgc ggcgaccacc acgttccggg
     1021 gcgccgtctc gagcagcgcg gtgatgccgg gctcccgcag cagccggtcc acggagggga
     1081 tcgaacggcg ggagtcactc attggcgggc ggacggaccg acggacggac ggacaggcgg
     1141 acggtatcgc cgcgagaaga atcgggacgc actccggtcg tgtcgcggcg ggcggaatcg
     1201 ggtagtgccg gcggccgagc ctgaatctcc aggatgcccc gggcactgcc ggtcacaccg
     1261 ttcaccgtgg tgacgccgtt gacgattacg acgtagcggg tgctgtcgcg ccaggcctgc
     1321 ttcattcgga gcaggagttt atcgaacaac gacggtttgg ttcggagcgg gccgcgatcc
     1381 gtcgtgtccg cctgggggcg ggctcccacc acccggcggg gcggcacccc agggatccgg
     1441 acggcactat cccgcgccgg cggccggacc gcgagcgaat cggctgcccg aacccgcgcc
     1501 gagtcggccg ccgtgggccg ggggcggtaa aggctgtcga aggcctgctg cggcaatagc
     1561 gcttcgacct ccaccgcgct ggaatccggc aatcgcaaca ctcgaaccga atcggccggc
     1621 agccgctggc ggggatcgag atgggtcgtg aagctgagcg tcgcggtcaa cgaatcggtg
     1681 cgcgcgacat tctggattcg gggaggcagc gagtcgtggc ggaaggccca gatctcgccc
     1741 actgaatcgc gggcggactg gacccggatg gaatcgaagt tctcgcgcga ctcccgccgg
     1801 ctgttgcggt tctgatcgat cgcgccgtag accacgtatt caccccgagg gaggggaccg
     1861 aaccggaacc ggcccgacga atcggcctgg gtgcggtaga ccaggctgtc gggcatgagg
     1921 acggcttcga ccagagcctg gcgggcgggt cgcgacgtgc tccagtcgac cactcgcccg
     1981 atcagcgagt cggtcggcag gtcggctccg gtggtgaagg tgaccaccgt ggaggcgcgc
     2041 gacgtattgt tgcgcaggtc gcgcaccccg gccagcagct cgacccggta cacggtgttg
     2101 ccgcgccagc cccctcgagg atggaccgta atgcggtcgc gacgccagcg caccaccggc
     2161 acctcctcgc taggggacag caccaccagc ttctcgagat caccgctgcc caggccgaaa
     2221 ttgggctggc ccccctcgga cacgacttcg tcgaaccgaa actcgacgtc gccgtcgaaa
     2281 tcggcatagc tggcgagaga atcggggcgg gtggcaacca ggttgggggg acgcaggtcg
     2341 ggcgggccac cggggggagg agcgatcttg gcgcagccgg cgagaacgac cagcagcacg
     2401 gcgacgggtc tcacccggta caaccgagct gctcgcgctt gtggcgcagc gagtcggcct
     2461 ggtcgcgcca cgagacgagc ttctcccgct cgcgttccac caccgcctgg ggcgcgcggc
     2521 tggtgaactg ggcgttggcg agcttggtct cctggccccg gatcaggccc gttaggcgct
     2581 cgagctcgcc gcccagccgg gcgcattccc gatccacgtc gatcagctcg cccagcggca
     2641 cggtaacttt agtgccgtcg gtcaacaccg cgtgaccggc cccccgcgcg gccccgtccc
     2701 cctcatgcaa ggtgagggat tccaccttcg ccagccgctc gatggtgccc ggctccgcct
     2761 ggatggcccg gcggaccgag gctgacgggc tcccgaccat cacccgtacc gtccgacccg
     2821 gctgcacgcc gtagtcggcc cggatggacc ggacggcgcc caccaactcc tgcaacaggg
     2881 cgaaacccgc cagggcctcg gcgtcggtgg cgcggtcatc cggccggggc caggccgcct
     2941 cggaaatgga ggcccgaggc gcgcggcccg gcagctgttt ccagagcgtc tcggtgatga
     3001 agggcatggc cggatgcaac agccggagcg ccacctcgaa gacctgcgcc agcaccgcgc
     3061 gggccacgtc gccgccgggc tggctgccgt agagtcgtgg ctttacctgc tcgatatacc
     3121 agtcggccaa gtcgctccag aggaaatgat aggcagtacc gatcgcctcg ttgagacgat
     3181 accgctcgta agcctgggtg gcgtcccgca ccgcggcatc acagcgggcg atgatccagc
     3241 gatcggcgag ggccagctcc ttgcggcgga ccacatcggg atacttcccc gccagcggcc
     3301 ggaccgggcc gtccagattc gacaggatga accggccggc attccagagc ttattggcga
     3361 agttccgccc cggcccgaac gagacttcga gatcgtcggg gtcgaggatg acatcggtcc
     3421 cgaccgccgc gccggaaagc gcggtatagc ggagcgcgtc ggctccgaac cggtcgatca
     3481 cctcgagggg atcgatgccg ttgccgcgcg acttggacat cttctgatgc ttggtgtcgc
     3541 gcacgatgcc cgtgaggtag accgtcgaga atgggacctg gcccctcacg tccagtccgg
     3601 ccatcaccat ccgggccacc cagaagaaga tgatgtcggg tccggtgacc agcacgtggc
     3661 cgggatagaa tcgctccagg tcggcggtgc ggtcgggcca tcccaggctg gtgaacggca
     3721 ccagctggga cgagaaccag gtatcgagga catcgtcgtc ctggcgcagg gcgctgtggc
     3781 aggccccgca ttcccagata tcggtccgac tggcggagat ggtgccgcag ccgtcgcagt
     3841 accacaccgg gatccgatgg ccccaccaga gttggcgcga gatgcaccag tcgcgaatgc
     3901 cggtgagcca ctgctcgtag accggccccc accgctcggg cacgaagcgc agcactccct
     3961 ggcggtaagc ctgaagggcc ggctcggcca gccgctgcat ccgcacgaac cactggtccg
     4021 agagccgggg ctccaccacg gtgtcgcagc gatagcagcg cccgatggca tgggtgtgcg
     4081 gctcgctgcc ttccaccagt ccctcggcct ccagctcggc caccacccgc ttgcgggcct
     4141 cgaagcggtc cagtccctgg aagcggagcg gcaccgtctc cgccatgcgg gcttccggtg
     4201 tcaacacgtc gatggccgtc agtccctgcc ggaccgcgat ctcgaagtcc agcgggtcgt
     4261 gagccggcgt gagcttgacg gcgccggtgc cgaactcacg gtcgacggcc tcgtcggcca
     4321 ccaccggaat gaggcggtcg gtgagcggca acttcacctg cttgccgacc agcttccggt
     4381 agcgcttatc ggtcggatgg accccgacgc cggtgtcgcc cagtaaggtc tcgggccggg
     4441 tggtcgcgac caccaggtga ccgccgcctt cgagcgggta gcggatccgc cagagggtcc
     4501 ccgtggtttc ctgcttctcg gcctcctcgt tcgagagggc ggtgaggcag cggggacacc
     4561 agttgatgat gtacttgccg cggtagatca ggtcgcgttc gtaccacgag acgaacactt
     4621 cccgcaccgc gcgcgacagg gtgtcggaga aggtgtagta ggtgcgggac cagtcgcagc
     4681 tggcgcccaa tccccggatc tggtgcagga tggtgtcgcc ggtctcacgg acatactcgc
     4741 ggacccgttc cacgaacgcc tcgcggccca ggtcgaagcg ggtccgccct tccttcccca
     4801 gcaggcgctc caccacgttc tgggtggcga tgccggcgtg atcggtgccg gggatccagg
     4861 ccgcgccccg gccccgcatc ctctcgaagc ggatcagagt gtcctggatg gtcaggttga
     4921 ggccgtggcc catgtgcagc cggtcggtca cattgggcgg cggcatcatg atgacgaacg
     4981 ggtcgcgccg gtcggtggcc tcgggccgcc aggcggcacg gtccagccac cactggtaaa
     5041 ggtcgcgttc gatctgggcc ggattgtact ggggcggcaa cgacgcggtc atgcgggctg
     5101 acgctcctcc tcgtccgcgc cggcgccgcc gggatggtcg tcctcgcccc gcaccttgag
     5161 gcgattggtc acttcggtgt cgggggcggc actgcgtgcc agccgcatgg cgcgggcgct
     5221 ggcggcgcgg gaagggaccc agccgtgcag ctccacctgc ccgatgcgga ccgtcacgac
     5281 ctcgaattcg atgcccccga gcagggggtc gtcacccagg gccgccgtga tccggatcgc
     5341 gtcctggcgc ggcatggcga acggcacccg gtgctggccg gtcatttcgc ccaccagggt
     5401 ccggatccgg cgccggtcca tgcctccgac aaatccccgg agaatgaacc cggcgaccag
     5461 ccccagtccc aggccggccg cgcccagggt tgcatcccgg gccgcattcg aacgccgtac
     5521 agaaagcctg cgcatggggt taagttaacg accggctcag tcctcttgta gctccattca
     5581 ccaacatgag ttcgcttgtg tcagagccca acgcgccctc cggttccacc tggctccgct
     5641 ggggcctggt catcctcctg atcctggccg gcatcgtgct cgcgctggtc ctgggttccg
     5701 agaccgagcc ggtggtgcag cccgagaccg tcatccgatg acgctccagg tcacccttcc
     5761 cgatggcagc gtgcgcgagc tgccgc
//
LOCUS       DASWKS010000604         2347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2204213, whole genome shotgun sequence.
ACCESSION   DASWKS010000604 DASWKS010000000
VERSION     DASWKS010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2204213"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VGA78_17265"
     CDS             complement(<1..380)
                     /locus_tag="VGA78_17265"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX9895684.1"
                     /translation="MTEDALEELLSRPTADLVQEMSHIAGDLLILGAGGKMGPSLARL
                     AVRASQQAGVARKVVAVARFTDPTIASSLEQAGVDILAGDLFDRRTVAQLPEVPNVIY
                     MVGQKFGTAEAASRTWAVNAYLPAL"
     gene            complement(415..1536)
                     /locus_tag="VGA78_17270"
     CDS             complement(415..1536)
                     /locus_tag="VGA78_17270"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX9895685.1"
                     /translation="MEELTPHFTAWRVMPAGTREIIDALVAPSSRGSDGLSAALARWP
                     GKWYWLDRDHGTLVLVRPITTVRPRWLLHGALILLTILCTLGAGAVLAGGYTPDLRPG
                     LAGVFISAGEFFLRAVQRDWYVLLQGWSFALPLLAILLVHELGHYVTARRYAIDTSPP
                     YFVPVPPTLSPIGSLGAFIRLRSPVVDRRQLLDVGAAGPLAGFVVAVAVLVWGYTTSE
                     RIPIVIGTDPSYVTLAGQPLFLGESLLTRALRDWLLPGTDAVHLSLPAFAGWVGVFIT
                     GLNLIPLSQLDGGHVTYGLLGRHQTRVAMLAVLALLWLAQRSPNWYVWVVFAFLVGGG
                     RVGHPPVLVPSRAIPRSRWLVGLACVVVFALTFVPVPFE"
     gene            1742..>2347
                     /locus_tag="VGA78_17275"
     CDS             1742..>2347
                     /locus_tag="VGA78_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
                     /protein_id="HEX9895686.1"
                     /translation="MDIAELKQKSVAELHELAQQLNISNYSGLRKQDLIFRIEQALLE
                     TDTVIRGEGVLEILPEGYGFLRSQDWNYLYGPDDIYVSPSQIKRFDLRTGDTILGQVR
                     PPKEGERYLALLKVEQVNFEEPDKAKHRIAFDNLRPRYPDRRIRLERADGDLSTRVVD
                     ILSPIGFGQRGLIVAPPKAGKTILLQKLANSITENEPNANLI"
BASE COUNT          481 a          805 c          746 g          315 t
ORIGIN      
        1 agggccggca gataggcgtt gactgcccag gtccggctgg ccgcctcggc ggtgccgaac
       61 ttctgaccga ccatatagat cacgttcggc acctccggca gctgagccac cgtccggcgg
      121 tcgaagagat cgcctgcgag aatatcgact ccagcctgct cgagagagga cgcgatcgtg
      181 ggatcagtga atcgagcgac ggcaaccacc ttgcgtgcga cccccgcctg ctgcgaggcc
      241 cgcaccgcca ggcgggctag actcggtccc atcttgccgc cggcgccgag gatcaggaga
      301 tcgccggcga tgtgactcat ctcctggacc aggtccgcgg tgggacggga aagcagttct
      361 tcgagggcgt cttccgtcat cggatccagg tcgtcaagtc gccacggctg acgattactc
      421 gaatggcacg ggcacgaacg tcagggcgaa cacgaccaca caggcgagac ccaccaacca
      481 gcggctgcga gggatggccc ggctgggcac cagcacaggc ggatggccca ctcgcccacc
      541 cccaaccaga aacgcgaaca ccacccagac ataccagttg ggggagcgct gggccagcca
      601 gagcaacgcc agcacggcca gcattgccac ccgggtctgg tggcgtccca gcagtccata
      661 ggtcacgtgc ccgccgtcga gttggctgag cggaatcaga ttcaggccgg tgatgaacac
      721 ccctacccat ccagcgaagg ccggcaggct caggtgtacc gcgtcggttc cgggaaggag
      781 ccagtcacgc agcgcccgcg tcaggaggga ttcacccagg aagagcggtt gccccgccag
      841 agtcacatag ctggggtcgg ttccaatcac gatggggatc cgctcggaag tggtgtaacc
      901 ccacaccagg acggcaaccg caaccacgaa cccggccaga ggaccggccg cgccgacatc
      961 gagcagctgg cgccgatcga cgaccggact ccggagccgg atgaaggccc cgaggctgcc
     1021 gatgggcgag agggtcggcg ggaccggcac gaagtacggg ggagaggtat cgatcgcgta
     1081 acgccgcgcc gtcacatagt gccccagctc gtgcaccagc agaatggcca ggagcggtag
     1141 ggcgaacgac cagccctgca acaggacgta ccagtcccgc tggaccgccc tcaggaagaa
     1201 ttcgccggcc gaaatgaaga ctccagccag cccggggcgg aggtcggggg tatacccgcc
     1261 agccaggacc gccccagccc ccagggtaca caggatagta aggagaatga gggccccgtg
     1321 gagcagccag cggggccgaa cggtggtgat cggtcggacc aggaccaggg tgccgtggtc
     1381 ccgatccagc cagtaccact tccccggcca gcgggccagg gcggcgctca gcccgtccga
     1441 cccccgggag gagggggcaa ccaacgcgtc gattatttcc cgggtcccgg cgggcatgac
     1501 ccgccaggcc gtgaaatggg gagtcagctc ctccacggac actcttgacg gcaaccgcgt
     1561 cggccgttaa tgtcccgcca tccggcaggc atcacccgaa cccccctgac gagtcacgaa
     1621 tccacttctc cggccccgcc ggagcgccgt ccatatacca agatcagcct ctgattccct
     1681 acccgatcac cacccaggtg gtcgccggcc accaagccag cgacccgacg gagtgccccc
     1741 tgtggacatc gccgaactaa agcagaagtc agtggccgag ctgcacgagc tggcgcagca
     1801 actgaacatc tcgaactact ccggcctccg caagcaggat ctgatcttcc ggatcgagca
     1861 ggccttgctc gaaaccgata cggtcattcg cggagaaggc gtgctggaga tccttccgga
     1921 gggctacggt tttctccgga gccaggactg gaactacctg tacgggccgg acgacatcta
     1981 cgtgagcccg agccagatca agcggttcga cctgcgcacg ggcgacacca tcctggggca
     2041 ggtgcgcccg cccaaggaag gggagcggta tctggcgctc ctcaaggtcg agcaggtcaa
     2101 cttcgaggag ccggacaagg ccaagcaccg gatcgccttt gacaacctgc gcccgcgcta
     2161 tcccgatcgg cgcattcgcc tggagcgcgc ggacggcgac ctctccacca gggtggtgga
     2221 catcctgtcc cccatcggct tcggccagcg tggcctgatc gtcgcaccgc ccaaggccgg
     2281 caagaccatt ctgctccaga agctcgccaa ttccatcacc gagaacgagc ccaacgccaa
     2341 cctcatc
//
LOCUS       DASWKS010000605         5313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1833232, whole genome shotgun sequence.
ACCESSION   DASWKS010000605 DASWKS010000000
VERSION     DASWKS010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1833232"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..2419
                     /locus_tag="VGA78_17280"
     CDS             194..2419
                     /locus_tag="VGA78_17280"
                     /inference="COORDINATES: protein motif:HMM:TIGR03296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M6 family metalloprotease domain-containing
                     protein"
                     /protein_id="HEX9895687.1"
                     /translation="MVGLCVLASEAVAQGPRGGELGRFEVRGMDFRPEGAWRRKVSRI
                     RESRRQLLRSGNLLSLNRAAESVRGGQPHLLAAGAANAVTGTVFVPVVPIAYSNIPVA
                     FPISDFQQVLFTPTPATLNRPYSLKTYYEELSNGLIQMEGRVFDPVRMDTTNTYFEDG
                     CNGVGVVNSCPNNGTRFGQMLLQALDSVSLRPGLDTTWNQFDNDGPDGLPNSGDDDGI
                     VDFVTFLHPTVDGACGKPGIWSHRFQIRAWNGGSAYVTKTPRRGTNGQPIAGQFIQVD
                     DYTIQSQIGGDNACSEGFIMPIGTVAHETGHAFGLPDLYDTDQGTRTQGIGEWGIMGS
                     GNFTKPLSPATYDAWSLVELGWVTVQELAQNSVVETGPRQLSDTVFLARASIPAEYFL
                     IENRQAVQSDTAQMNPSYSKRKAPGLAIWFIDENVIALGRPSNRVNTGVNQGVSLMQA
                     DGLNQLRTLGSTNRGDTGDSYPGSNGNTRFGFATNPSSRNHFNEFAGFAIDRVEQLAG
                     QVMRFRFTRRQPSLFRPGTTGAEIRVAGALTTRYEEVVPQGDVITLGADVTQTVNGGR
                     TEARFLAWSNGGPREQQLVSGAGPDTITATFAASHRVLAAIQGGGTLSSSVQGNLAQG
                     IFVEAGSAVTLNATPPSSSVFGGWQGDTATVNPALVLPMQRPYDVTAVFLLEQQIPVE
                     DATQEVLGTTRLTQAQRDYLDSLGNRNGGYDVGDYLAFLKRAGLQPSAAVLQKLVGGR
                     R"
     gene            2416..2805
                     /locus_tag="VGA78_17285"
     CDS             2416..2805
                     /locus_tag="VGA78_17285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895688.1"
                     /translation="MTRRNPLLLLLAVALACGGEDGPTDEPRPGELVAALNTPNNQDG
                     ALLLRVVGPVSAVTPVGGHRVSSATSGATTRVVLTGNITDGDILRLTVPDTRNLTSYT
                     VLVEQVAARDTYALLEPGGYSIALRVK"
     gene            2836..3291
                     /locus_tag="VGA78_17290"
     CDS             2836..3291
                     /locus_tag="VGA78_17290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX9895689.1"
                     /translation="MIGLRINGKDVSVDAPPDTPLLWVLRDALGMTGTKFGCGIGQCG
                     ACTVHLNGQPARACQLPVGSLGEREVTTIEGLSDDGSHVVQQAWIAEQVPQCGYCQSG
                     QIMSAAALLARTRNPTDADIDAAMSGNMCRCGTYQRIRRAIHRAAGGAP"
     gene            3288..>5313
                     /locus_tag="VGA78_17295"
     CDS             3288..>5313
                     /locus_tag="VGA78_17295"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX9895690.1"
                     /translation="MNASGSEEQGAGRVSRRDFLRSTAVAGVGLTVAVQWGCAPGEGA
                     SSGPVTTPFAPDAFVRVSTDGSVTVVCGYSEMGQGVLTAVPQLVAEELDVEWSKVRVE
                     QSPAGEAYFNPAFGMQGTGGSTTVRASWKPMREAGARARAMLVAAAAQRWGVGPEACS
                     TAAGSVLKNGSSDRLSYGELAEAAAAIPVPETVTLKDPKDFRILGKAVPRLDLPDKVV
                     GAGRFGIDVKVPGLLVAVVERSPVFGGKPVKWDEAAAKAVPGVRQVVPISSGVAVIAE
                     GYWSARKGREALKVEWDNGPNAGQSSQKISVQLAALVKRPGVSVRKAGAGAAPQAGKV
                     VEAVYEVPYLAHACMEPMNATAHVEADKVTVWAPIQFQAAAGQAFGGGAREVAARIGG
                     VPADQVTIHTTLLGGGFGRRFFLDFVGEALECSKAVAAPVKVVWSREDDIQHDFYRPV
                     STAWFRGTVSADGTPVSWVNRVACPAIIPAGPGKVDDSSHEGLSNFPYAIPNVAVEVH
                     NPNLGVPTGFWRSVGSSQNAFFSECFVDELAQAAGKDPFEFRRGLLGQAPRHKRVLEL
                     AAEKAGWGTPLPSGQARGIAVAESFGSYVAQVAEVSMQQGVPRVHRVVAAIDCGPIVN
                     PDIIAAQIESAVVYGLAAALYGEITIEGGRSVQGNFDLYRMLRINEMPVVE"
BASE COUNT          885 a         1713 c         1835 g          880 t
ORIGIN      
        1 tgtggggcac ggtccctcgc agaggatgga cggtccgacc gacagtcaag tcacgcaaca
       61 acttaactta atttgtgggg cccgggacca caagcgaacc tgccacaggt tggttgcagg
      121 gtcgcaacac ggtattcttc aacccgaata gtccatgagt ccttgcgtgc gttactggtt
      181 ggaacttggc ctcgtggtgg gcctttgcgt gcttgcctcc gaggccgttg cgcagggccc
      241 ccgaggtggg gaactgggac gcttcgaggt ccgcgggatg gatttccggc ccgagggcgc
      301 ctggcggaga aaggtctcgc ggattcggga gagccgccgg cagctgctcc gatccgggaa
      361 cctcctgtcc ctcaatcgtg cggccgagtc ggttcggggc ggtcagcccc atctgctggc
      421 cgccggggcc gccaacgccg tcaccggaac agtcttcgtc ccggtggttc cgatcgccta
      481 ttcgaatatc ccggtggcgt tcccgatcag cgatttccag caggtgctgt tcaccccgac
      541 tcccgccacg ctcaaccggc cgtacagcct caagacctat tacgaagagc tttccaacgg
      601 cctgatccag atggaagggc gggtcttcga tccggtgcgg atggacacca ccaacaccta
      661 tttcgaggac ggctgcaacg gtgtcggggt ggtgaactcg tgtcccaaca acgggacccg
      721 cttcggtcag atgctgctcc aggcgctgga ctcggtttcc ctccgtcccg gcctggacac
      781 cacctggaat cagttcgaca acgacgggcc ggacggcctg ccgaactcgg gcgacgacga
      841 cggcatcgtc gatttcgtca ccttcctcca ccccaccgtg gacggcgcct gcggcaagcc
      901 cgggatctgg tcccaccggt tccagatccg ggcctggaac gggggatcgg cgtacgtcac
      961 caagaccccg agacgcggaa ccaacggaca gccgatcgcc gggcagttca tccaggtaga
     1021 cgattacacc atccagagcc agatcggggg cgacaacgcc tgctcggaag ggttcatcat
     1081 gccgatcggt acggtggctc acgagaccgg acacgccttc gggctgcccg acctctacga
     1141 caccgaccag ggaacgcgga cccaggggat cggcgagtgg ggtatcatgg gcagcgggaa
     1201 cttcaccaaa ccgctgagcc cggccaccta cgacgcctgg tccctggtgg agctagggtg
     1261 ggtaaccgtc caggagctcg cacagaacag cgtcgtggag accggacccc gccagctcag
     1321 cgacacagtc ttcctggccc gggcgagcat tccggccgag tatttcctga tcgagaatcg
     1381 tcaggcggtg cagagcgaca cggcccagat gaatccgagc tattccaagc ggaaagcgcc
     1441 cggcctggcc atctggttca tcgacgagaa cgtcattgca ttgggccgtc ccagcaaccg
     1501 ggtgaacacc ggcgtcaatc agggcgtttc gctgatgcag gccgatggcc tcaaccagct
     1561 tcggacgctg ggatcgacca accggggtga caccggcgac tcctatcccg gctcgaacgg
     1621 caacacccgt ttcggattcg ccaccaaccc gtcatcccgg aaccacttca acgagttcgc
     1681 gggctttgcc atcgaccgtg tcgaacagct ggccggccag gtcatgcggt tccgcttcac
     1741 ccggcgtcag ccgtccctgt tccggcccgg taccacgggc gcggagatcc gagtggccgg
     1801 agccctgacc acccgctacg aggaggtcgt tccgcaaggc gatgtaatca cgctcggcgc
     1861 cgacgtcacc cagacggtca atggcgggcg aaccgaggcc cgcttcctgg cgtggagcaa
     1921 cggcggaccg cgggaacagc aactggtcag cggcgccggt cccgatacca tcaccgccac
     1981 gttcgccgcg tcgcatcggg tactggccgc cattcaaggc ggcggaacgc tgagctccag
     2041 cgtgcaggga aacctggccc agggaatttt cgtcgaggct gggagcgcgg tgacgctcaa
     2101 cgccacgccg ccgtcgagtt cggttttcgg cgggtggcag ggcgataccg cgacggtcaa
     2161 cccggccctg gtgttgccga tgcagcggcc ttacgacgtg accgcagtgt ttctgctgga
     2221 gcagcagatt ccggtcgagg acgccactca ggaagttctg ggaaccaccc ggttgaccca
     2281 ggcgcaacgg gactaccttg attccctggg gaaccgcaac ggcggatacg acgtcggcga
     2341 ttacctggcc ttcctcaagc gcgcgggtct ccaacccagc gccgcggtgc ttcagaagct
     2401 ggtgggggga aggcgatgac gcggcgaaac cccctgctgc tgttgctggc cgtagccctc
     2461 gcgtgtgggg gcgaggatgg ccccaccgac gagccccggc cgggtgagct ggtggcggcc
     2521 ctcaacacgc ccaacaacca ggacggggcg ctcctgctcc gcgtcgtggg tccggtcagt
     2581 gcggttaccc cggtgggagg ccaccgggtc tcgtcggcca cctcgggcgc gaccacccgg
     2641 gtggtgctga cgggcaacat taccgacggc gatattctgc gcctgaccgt gcccgatacc
     2701 cgaaacctga cctcctacac ggtgctggtg gagcaggtcg ccgcccgcga cacctatgct
     2761 ctgctggagc ccggtggtta cagcatcgct ctgcgcgtga agtagcttcg tagtctcaca
     2821 caatccgagg ttcatatgat cggcctgcgc atcaatggca aggacgtgtc ggtcgacgcc
     2881 cctcccgaca cgcccttact ctgggtgctt cgcgatgcct tgggcatgac gggtaccaag
     2941 ttcggctgcg ggatcgggca atgcggtgcc tgtaccgtcc acctcaacgg ccagccggcc
     3001 cgcgcctgcc agcttccggt cggcagtctg ggtgagcgcg aggtcacgac catcgaaggc
     3061 ctctcggacg atggcagcca tgtcgtgcaa caggcctgga tcgccgagca ggttccccag
     3121 tgcggctact gccagtcggg ccagatcatg tcggctgccg cgttgctggc ccggaccagg
     3181 aatccaaccg acgcggacat cgatgccgcc atgtcaggca acatgtgccg ctgcggcacc
     3241 taccagcgta tccgacgggc catccaccgg gccgcgggag gtgccccatg aacgcgtcag
     3301 ggagcgagga gcagggagca gggagggtct cacggcggga tttcctgcga tcgaccgcgg
     3361 tcgccggggt gggcttgacg gtcgcggttc agtggggttg cgccccgggc gagggcgcgt
     3421 cctccgggcc cgttaccacg ccgtttgcgc ccgatgcgtt cgtccgagtg agtacggacg
     3481 gatcggtcac cgtcgtctgc ggatactccg agatgggcca gggagttctc acggcggtgc
     3541 cgcaactggt ggccgaagag ttggatgtcg agtggtccaa ggtgagggtg gagcagtccc
     3601 cggcgggcga ggcctacttc aaccccgcgt tcgggatgca gggcaccggg ggcagcacga
     3661 cggtgcgggc gtcctggaaa ccgatgcgag aggctggtgc cagggcgcgc gccatgctgg
     3721 tcgcggccgc ggcccagcgc tggggcgtgg ggccggaagc ctgctccacc gcggcgggtt
     3781 cggtgctcaa aaacggctcg agcgatcggc tgtcgtacgg cgagttggcc gaagccgccg
     3841 ctgccatccc ggtgccggag accgtgacgc tcaaggaccc gaaggatttc cggattctcg
     3901 gcaaggcggt gcctcgactg gacctgcccg acaaggtggt cggcgccgga cgcttcggaa
     3961 tcgatgtgaa ggtgccgggt ctgctggtgg cggtggtgga acgaagcccg gtcttcggtg
     4021 gcaagccggt caagtgggat gaggcggcgg ccaaggccgt ccccggggtg cgccaagtcg
     4081 tcccgatcag ttccggcgtg gcggtcatcg ccgaggggta ctggtcggct cgcaaggggc
     4141 gtgaggccct caaggtggaa tgggacaacg ggcctaacgc cggtcagtcg agccagaaga
     4201 tctcggtcca gctggcggca ctggtaaagc gcccgggcgt ctcggtacgc aaggcgggag
     4261 ccggtgcggc gcctcaggcc ggcaaggtgg tcgaggcggt gtacgaagtg ccttatctcg
     4321 cgcacgcctg catggagccg atgaacgcca ccgcccacgt cgaagccgat aaggtgacgg
     4381 tctgggcacc gatccagttt caggctgcgg cgggccaggc gttcggcggc ggggcccgcg
     4441 aagtcgcggc ccggatcggc ggggttcccg cggaccaggt gacgattcat accacgctgc
     4501 tgggtggcgg cttcggtcgt cgcttcttcc tcgattttgt gggcgaagcc ctggagtgct
     4561 ccaaggccgt ggcggcgccc gtgaaagtgg tctggagccg cgaggacgac atccagcacg
     4621 acttctatcg tccggtatcg accgcctggt tccgggggac cgtctcggcg gacggcaccc
     4681 cggtgtcgtg ggtcaaccgg gtagcgtgcc cggcgatcat ccccgccggt ccgggcaagg
     4741 tcgacgacag ctcgcacgag ggcttgtcga atttccctta cgccattccc aacgtggcgg
     4801 tggaagtgca caaccccaac ctgggggtgc caaccgggtt ctggcggtcg gtgggctcgt
     4861 cccagaacgc cttcttctcg gaatgcttcg tggatgagct ggcccaggcg gccggcaagg
     4921 acccgttcga gtttcgccgc ggcttgttgg gccaggcgcc gcgccacaag cgggtgctgg
     4981 agctcgccgc cgagaaggcc ggttggggca cgccgctccc gtccgggcaa gcgcggggca
     5041 ttgccgtggc ggagtcgttc ggcagctatg tggcgcaggt agccgaggtc tcgatgcaac
     5101 agggggtgcc gcgggtacat cgggtcgtcg cggccatcga ctgcggaccc atcgtcaacc
     5161 ccgacatcat cgcggcccag atcgagagcg ccgtcgtcta cggtctggcg gcggccctct
     5221 acggcgagat caccatcgag ggtgggcgct cggtccaggg caacttcgat ctgtaccgga
     5281 tgctccgcat caacgagatg cccgtggtgg aag
//
LOCUS       DASWKS010000606         2189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1835004, whole genome shotgun sequence.
ACCESSION   DASWKS010000606 DASWKS010000000
VERSION     DASWKS010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1835004"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VGA78_17300"
     CDS             complement(<1..376)
                     /locus_tag="VGA78_17300"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HEX9895691.1"
                     /translation="MRMHVRPALSALGAVLAFSACGGEPPERAGPAPLEIGGTAFVVR
                     DTLVVDVFEAAGVAEPVQRAMLASKLMARVTEVLVQEGDRVGAGQVLARLDARDLSAR
                     AEQAAAGLTGAEAGYQEALAQAH"
     gene            complement(378..1739)
                     /locus_tag="VGA78_17305"
     CDS             complement(378..1739)
                     /locus_tag="VGA78_17305"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX9895692.1"
                     /translation="MKPPRRLHQAAAAVVLGVLAGPSAAQQPLTLARAFAIADSQAYG
                     NRLAHAARDLRAGERDQTLKGLLPSLRVEGGWMRTTDPLSAFGFTLRQRGVSQASFDP
                     SALNAPEPISNIAAGLVAEVPLLNPDVWLGRRAADAAVRAAEEMTRWTRAAGRLDVVR
                     AYFGGILARDHVAALEAGWAAAQSHVRSARSLYEQGIVTRSDVLLAEVKAGQLEAQLL
                     SVRGREAIALRQLAVVLGIAEPGTLSLPAALPDLAPLTRIDPQSMPGLRADVAAAQAG
                     AEAARHDVARATALLLPRVNSFGRLDWNQPRTGFGGRPSWTIGVMASWSLFGGGSELV
                     ARRAAMARAASAATEAEAAEARAALELAERRNDLEVALATTAIASRAVDQAAEAHRIV
                     SRKYQGGLATVTELLEASAVETHARVERSASIYRAITAAAAWRVTLGLDASDLTLLDQ
                     GGN"
     gene            complement(1808..>2189)
                     /locus_tag="VGA78_17310"
     CDS             complement(1808..>2189)
                     /locus_tag="VGA78_17310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX9895693.1"
                     /translation="IGLDRIAGYLGPETLDVWGAEHGSLGTVGQVTVTEFAGDGRDTF
                     LLDVRGESEWRGGHLPGATLIPLSELPERLGEVPSDRAVVVHCQTGSRSAIAASLLLA
                     RGRRASNLAGGYSAWVAAGLPVVT"
BASE COUNT          338 a          827 c          728 g          296 t
ORIGIN      
        1 gatgggcctg cgccagcgct tcctggtagc cggcttccgc tccggtcagt ccggccgccg
       61 cctgttcggc ccgggcggag agatcccggg cgtccagtcg cgcgagcacc tggccggccc
      121 ccacccgatc gccctcctga accagcacct cggtaacccg ggccatcagc ttcgacgcca
      181 gcatcgcccg ttgcaccggc tcggccactc ccgccgcttc gaacacatcg actacgagcg
      241 tgtcgcggac cacgaacgcc gtcccgccga tctccagcgg agccgggccg gcccgctcgg
      301 gaggttcccc accacaggcc gagaaagcga ggaccgctcc gagtgccgac agggccggtc
      361 gcacgtgcat ccgcatatca gtttccgcct tggtccagaa gcgtcagatc cgaagcatcc
      421 aggcccagcg ttacccgcca ggccgccgcc gcggtgatcg cgcggtagat cgatgcggag
      481 cgctccaccc tggcgtgggt ctccaccgcg gaggcctcga gcaattcggt gaccgtagcg
      541 agcccaccct ggtatttccg gctcacgatc cgatgggctt cagccgcctg gtccaccgcg
      601 cgtgacgcga tcgccgtggt ggcgagagcc acctcgagat cgttgcgccg ttcggccagt
      661 tccagcgccg ccctggcttc ggcggcttct gcctcggtcg ccgcactcgc ggcccgcgcc
      721 atcgccgccc gccgagctac cagctccgat ccgccgccga acagggacca gctcgccatc
      781 acgccgatgg tccaggaggg ccgaccgccg aacccggtcc gcggctggtt ccagtcgagt
      841 cggccaaagg aattgacccg aggcagcagc agcgccgtcg cccgcgccac gtcgtggcgg
      901 gcggcctccg cgccagcctg cgcggccgcg acatcggctc ggagcccggg catcgattga
      961 ggatcgatcc gggtcagcgg cgccaggtcg ggcaacgccg ctggaagcga gagcgtgccg
     1021 ggctcggcga ttcccagcac cacggccagc tggcgcaacg cgatcgcctc ccgcccccgc
     1081 accgacagca gctgcgcctc cagctggccc gccttgacct cggccagcag aacgtcggag
     1141 cgggtcacga taccctgttc gtagagcgat cgagccgatc gcacgtgact ttgggccgcc
     1201 gcccatccgg cctccagggc agcgacgtgg tcccgggcca ggatcccgcc gaagtacgcc
     1261 cggaccacgt cgagccggcc cgccgcccgg gtccagcgcg tcatctcctc ggcggcccgg
     1321 accgccgcat cggccgcacg gcggcccagc cagacgtcgg gattgagcaa cggcacttcg
     1381 gccaccaacc cggcggcgat gttgctgatc ggctcgggcg cgttcagcgc cgacggatcg
     1441 aaagaggcct ggctgacgcc gcgctggcgc agggtgaatc cgaacgcact gagcgggtcg
     1501 gtggtccgca tccatccacc ctcgacccgc aacgagggca gcaggccctt gagggtctgg
     1561 tcccgctcac cggcccgaag atcccgggcc gcgtgggcga gccggttgcc gtaggcctgg
     1621 ctatcggcga tggcgaaggc gcgcgccagc gtgagcggct gttgcgcggc cgacggcccg
     1681 gcaaggaccc cgagcaccac ggcagcggcg gcctggtgga gtcggcgcgg aggtttcata
     1741 atttatgact atatagccat atagttgtat agtcaacaat cgtgaagtct ggagctccgg
     1801 gtcggcccta ggtcaccacc ggaagtccgg ccgcgaccca ggccgaatac cctcccgcca
     1861 gattgctggc ccggcggccc cgagccagca ggaggctggc ggcgatcgcc gagcgggagc
     1921 cggtctggca atgaaccacc accgcccggt cggagggaac ctcccccaga cgctccggaa
     1981 gctcggagag cggaatcagg gtggcgcccg gaaggtggcc cccccgccat tccgattccc
     2041 ctcggacatc cagcagaaac gtgtcgcggc cgtcgccggc gaactccgtc accgtgacct
     2101 ggccgacggt gccgagcgat ccgtgctcgg ccccccacac gtccagcgtt tcggggccga
     2161 gatagccggc gatccggtcc agcccgatc
//
LOCUS       DASWKS010000607         2810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1084561, whole genome shotgun sequence.
ACCESSION   DASWKS010000607 DASWKS010000000
VERSION     DASWKS010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084561"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..1290)
                     /locus_tag="VGA78_17315"
     CDS             complement(52..1290)
                     /locus_tag="VGA78_17315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9895694.1"
                     /translation="MDDTLYFTDHHHQVREMVREFARTHVAPVAREFDRTQEFPWENI
                     RAMGELGLLGVPWPEELGGAGMDHLSYYVTLHELAKVDASHALTVSAHTNLGTSPIVE
                     FGTADQKQRYVPLLASGKVMGGFGLTEPGAGSDAGGTASTAVDKGDHYVLNGTKSLIT
                     HGGVGEIFSVTARTSPGNETRGITSFILTKDTTDLAKCREVGVGHVEELPKTPGFRAG
                     KKEDKMGWRASDTRELIFEDAIVPKENVLGIQGDGFVNFLKTLDAGRIGIAALSLGIA
                     EGAYEQARCYSGSRRQFGRAIASFQGVAFALADMAMEIEAGTHLLYTAARLKQAGKPF
                     KKEAAMAKLFCSELAMRATTKAVQIFGGYGYTTEYPVERMMRDAKVCEIGEGTSEIQR
                     IVIAREILAGMVDTRQVASA"
     gene            1420..2208
                     /locus_tag="VGA78_17320"
     CDS             1420..2208
                     /locus_tag="VGA78_17320"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX9895695.1"
                     /translation="MAPISPFAATALVAVLAGSVPLVSGATQSPASYSGTLVRRDSTP
                     VVSARVRLSGVERVALTSDSGRFEFRDLLPGRYDVSILAPGSPPVSMQVVLAPGESYH
                     TRIVLAEEPQRLQDITVSTAGARPSATERRLEGFERRRRRGLGVFLTAADLARRNPRV
                     LSDALVNINGTRLMDRGRGKVLISARGMIPTAYGGGMVAAPCMLRVVIDGMSLPTGLS
                     VDEVKPEDIAGIEIYPGSASMPVELAHFQEDSWCGAVVIWTRGG"
     gene            complement(2343..>2810)
                     /locus_tag="VGA78_17325"
     CDS             complement(2343..>2810)
                     /locus_tag="VGA78_17325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecQ family zinc-binding domain-containing
                     protein"
                     /protein_id="HEX9895696.1"
                     /translation="FGMGIDKPEVRLVLHWSMPPTPESYYQEAGRAGRDGKPARCVLL
                     HGPGDLALHRLQIGVTFPPEKLLEAAWRDAASLKRLPSAMRASVERLRAELRPERGPV
                     NWSAVRKRKQLALERLKAVERYARTRGCRRAVLLGWFGEEVRRCASCDRCTTR"
BASE COUNT          434 a          943 c          946 g          487 t
ORIGIN      
        1 atgcatagct ccaaagctat gtcctgtcag aatttagagc aaggcgtccc gtcatgccga
       61 tgccacctgc cgggtatcga ccatgccggc caggatctca cgggcgatga caatccgctg
      121 gatctcgctg gtcccctccc cgatttcgca cactttggca tcccgcatca tccgctcgac
      181 cgggtactcg gtggtgtagc cgtagccgcc gaagatctgg accgccttgg tggtggcccg
      241 catggccagc tcggagcaga acagcttggc catcgccgct tccttcttga acggcttgcc
      301 ggcctgcttg agccgggctg cggtgtagag gaggtgggtc ccggcttcga tctccatcgc
      361 catgtcggcc agggcaaagg cgaccccctg gaacgaggcg atggcgcggc cgaactgcct
      421 gcggctgccg gaatagcacc gggcctgttc gtaggcgcct tcggcgatgc ctaacgaaag
      481 cgccgcgatc ccgatccggc cggcgtcgag ggttttgaga aagttgacga agccgtcccc
      541 ctgaatgccg aggacgttct ccttgggaac gatggcgtct tcgaatatca gctcgcgggt
      601 atcgctggcc cgccagccca tcttgtcttc cttcttcccg gcccggaacc ccggggtctt
      661 gggcaactcc tcgacgtgtc ccacccccac ctcgcgacac ttggcgagat cggtggtgtc
      721 cttagtcaga atgaagctgg tgataccgcg ggtctcgttg ccgggcgaag tccgggccgt
      781 caccgagaag atctccccca ccccgccgtg ggtgatgagg gacttggttc cattgaggac
      841 gtagtgatcc cctttgtcga cggcggtgct ggctgtgccg ccggcgtcgc tgccggcccc
      901 cggctcggtg agaccgaatc cccccatcac cttgccgctc gccagcagcg gcacgtaccg
      961 ctgcttctgg tccgcggtcc cgaactccac gatcggtgag gtacccagat tggtgtgggc
     1021 gctcaccgtg agggcgtgcg aggcgtcgac cttggccagc tcgtgcagcg tgacgtagta
     1081 ggacaggtgg tccatgccgg caccgcccag ctcctcgggc cacgggacgc ccagcaggcc
     1141 cagctcgccc atggcccgga tgttctccca ggggaattcc tgggtccgat cgaactcgcg
     1201 agccacgggg gccacatgag ttcgcgcgaa ttcccgcacc atttcgcgga cctggtggtg
     1261 gtggtcggtg aagtagaggg tatcgtccat tcgatgtcgc tggttgccag tcgctggtca
     1321 caggtcgcga gaaccgcggg gccctcgccg ggcggaggca atataattcc cgaggccgca
     1381 gaatcttccc cgggggtcca ccgtaaggag aggaacccca tggctccaat ctccccgttt
     1441 gccgccaccg ccctcgtggc ggtgctggcg ggctccgtcc cactggtttc cggggcgacc
     1501 cagagtcccg ccagctacag cggcaccctg gtccggcgcg acagcacccc ggtggtatcg
     1561 gcccgggtcc ggttgtcggg cgtggagcgg gtggccctca ccagcgacag cggccggttc
     1621 gagttccgcg atctgctccc gggacgctac gacgtgtcga ttcttgcgcc cggttctccg
     1681 ccggtgtcga tgcaagtggt gctcgccccg ggtgagtcgt accacacccg gatcgtgctg
     1741 gcggaggaac cgcagcggct gcaggacatc acggtctcga cggccggggc ccgacccagc
     1801 gccaccgaac gccggctgga ggggttcgag cgacgccggc ggcgcggcct gggcgtgttc
     1861 ctcaccgccg ccgatctggc ccgccggaac ccgcgggtcc tgtccgatgc gctggtgaac
     1921 atcaatggga cgcgactgat ggaccgcggc cgcggcaagg tgctgatcag cgcccggggc
     1981 atgatcccga cggcgtacgg cgggggaatg gtggcggcgc cctgcatgct tcgggtcgtg
     2041 atcgacggga tgtcgctgcc gacaggcttg tcggtggacg aggtcaagcc cgaggacatc
     2101 gccggcatcg agatctaccc cggatcggcc agcatgccgg tcgagctggc ccatttccag
     2161 gaagacagct ggtgcggagc ggtcgtcatc tggaccagag gggggtaacc cggcgttcgg
     2221 gtgaagggag gaggaagcag ggagcaggga gcagggagca gggagcaggg agcagggagc
     2281 agggagcagg gagcaggact cgcgggcttt gctccctgct tcccgctgcc tgctccctgt
     2341 tgttagcgag ttgtacaccg atcacaactg gcacatcgcc tcacctcctc gccaaaccat
     2401 cccagcagca ccgctcttcg gcatcctcgc gtcctggcgt agcgctccac cgccttcaat
     2461 cgctcgagtg ccagctgctt ccgctttcgc accgctgacc agttgactgg cccgcgctcc
     2521 gggcggagct cggcccgcag gcgctcgacc gaggcccgca tggctgaggg caggcgcttg
     2581 agcgatgccg cgtcacgcca ggcggcctcg agcagcttct ccggcggaaa ggtcaccccg
     2641 atctgcaacc gatgcagggc gagatcaccc ggcccgtgca gcagcacgca gcgggctggc
     2701 ttgccatcgc ggccggcccg accggcctcc tggtagtacg actcgggtgt gggcggcatg
     2761 ctccagtgca gcaccagacg gacctccggc ttgtcgatcc ccatgccgaa
//
LOCUS       DASWKS010000608         3078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2928871, whole genome shotgun sequence.
ACCESSION   DASWKS010000608 DASWKS010000000
VERSION     DASWKS010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2928871"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1130)
                     /locus_tag="VGA78_17330"
     CDS             complement(126..1130)
                     /locus_tag="VGA78_17330"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895697.1"
                     /translation="MKIAIAYDGGSSDWSEADVAAVLANVRQVQASLKRLGHSTSLVP
                     VYLQDLRWLSKVQRADLVFNLIEGINGIACYEDWAVGALELAGVPFTGCRAAAVSLCH
                     RKHVANTLLDRAGVPVPGFALARRNQPPPGLRLPVIVKPSGEDASVGIENGAVCATKK
                     AVRERLAMTSEQWDEVMVQEFVDGREFYVGFLGPVVLPLSEISFDTLGDGYWRIVSYA
                     AKWVEGSPEYQGTVAVCPAQVEPALAQRIVGVARLAWGALAGEGYGRVDLRVSSDDEP
                     WVLEVNPNPDLSTDAGFAGMARAHGWDYDQLVGQVVDEALARASRRSADEGLARQIAG
                     "
     gene            complement(1127..2236)
                     /locus_tag="VGA78_17335"
     CDS             complement(1127..2236)
                     /locus_tag="VGA78_17335"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895698.1"
                     /translation="MPVRIGLAFNLKPSPSVSGDATPPTATSKNPRHARRALHPELEQ
                     PDLYAEWDEPETIDAVERALAPLGEVVRLEADQQFPDRLREARPDFVFNIAEGLYGPN
                     REGHVPAICEFFGIPCHASDPLALSLTLHKGRTKEILSFYGIPTAPFAVVETKAEARK
                     VKLPFPLFAKPAVEGSGKGITIRNVCHNRAELLALTGDLLKAYRQPVLIESYLPGPEF
                     TVAVLGNAGEARCLPIVGLRFDCLPEGAPPIYGYEAKWLWDTMESPLEIYECPARIPE
                     DFAADIRDVALRAYQALACRDWCRVDVRCTASGGPLVVELNPLPGILPDPRDNSCFPM
                     AARAAGMNYDELIQAVADIAWRRISGRRLRAAAAA"
     gene            complement(2408..>3078)
                     /locus_tag="VGA78_17340"
     CDS             complement(2408..>3078)
                     /locus_tag="VGA78_17340"
                     /inference="COORDINATES: protein motif:HMM:NF037084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895699.1"
                     /translation="ELEKAVGRNGSAAKLQLAAVSLLQKTLKQHKRVIFQGDNYTTEW
                     HKEAARRGLPMMKDSVEAFPILTAKKNVDLFRKYGVLSKVELDSRSHITIEKFVKQLV
                     IEAETMVALARTQVLPAAYKHQTMLAGTVAATEAAGGKAADAKATLDEFTTVMNRFRK
                     ALGALEKASAHHLDDPMGHARHIKDKVRPAMADMRVVIDQLETHIEAGLWPLPTYREM
                     LVLK"
BASE COUNT          508 a         1043 c         1008 g          519 t
ORIGIN      
        1 gaagacttcg agggctaccg ggatttcgtc gcggcggaag acgccgaccg cacgagtcat
       61 gatctcgacc gcggcgtggt cgcgcccggc gaggggacga agcgtgaccg cgccggccgc
      121 ggtggtcatc cggcgatctg ccgggccagc ccctcgtcgg ccgaacgacg gctggcccgt
      181 gccaacgcct cgtccactac ctggcccacc agctggtcgt aatcccagcc gtgggcccgg
      241 gccatgcccg cgaagccggc gtcggtggag aggtccgggt tgggattgac ctcgaggacc
      301 cagggctcgt cgtcggagct cacccgcagg tcgacccggc cgtagccctc ccccgccagg
      361 gcgccccagg ccaaccgcgc cacccccacg atacgttggg ccagcgccgg ctccacctgg
      421 gccggacaga ccgcgacggt gccctggtac tcgggactcc cttccaccca tttggcggcg
      481 taggagacaa tgcgccagta gccgtccccc agcgtatcga acgagatctc cgagagcgga
      541 agcaccacgg gaccgaggaa cccgacgtag aactcccgcc cgtccacgaa ctcctgcacc
      601 atcacctcgt cccactgctc gctggtcatc gccagtcgtt cgcggaccgc cttcttggtg
      661 gcgcagaccg ccccgttctc gatgccgacc gaggcgtctt cgccggaggg cttcacgatg
      721 accggcaggc gcaggccggg cgggggctgg ttgcgccggg ccagggcgaa tccgggcacc
      781 gggacgccgg cccggtccaa cagggtattg gcgacgtgct tacggtggca caggctcacc
      841 gcggcggccc ggcagccggt gaagggcacc ccggccagct ccagggctcc gaccgcccag
      901 tcctcgtaac aggcgatccc gttgatcccc tcgatcaggt tgaagacgag atcggcgcgc
      961 tggaccttgc tcagccagcg caggtcttgg aggtacaccg gaaccaggct ggtcgagtga
     1021 cccagccgtt tgaggctggc ctggacctgt cgcacgttcg ccaggaccgc ggccacgtcg
     1081 gcttcgctcc agtcggagga gccgccatcg taggcaattg cgatcttcac gccgccgccg
     1141 ccgcccgcaa ccgtcggccc gagatccgac gccaggcgat gtcagccacg gcttgaatca
     1201 gctcgtcgta attcatgccg gcggcccgag ccgccatcgg gaagcacgag ttgtcccgcg
     1261 gatccggcaa gataccgggc agcggattga gctcgactac cagcggcccc ccgctggcgg
     1321 tgcaccgcac gtcgacccgg caccagtctc gacaagccaa cgcctggtag gcccggaggg
     1381 cgacgtcccg gatgtcggcg gcgaagtcct ccgggatccg ggccggacac tcgtatatct
     1441 ccagcggcga ctccatcgtg tcccacagcc acttggcttc gtagccgtag atgggtggcg
     1501 ccccctccgg caggcagtcg aaccgcagtc ccacgatcgg gagacagcgg gcctccccgg
     1561 cgtttcccag caccgccacc gtgaattcgg ggccgggcag gtagctctcg atgagcaccg
     1621 gctgccggta ggccttgagc aggtcgccgg tcagcgccag cagttctgcc cggttatggc
     1681 agacattccg gatggtgatt cccttgcccg acccttccac cgccggtttg gcgaagaggg
     1741 ggaacgggag cttcaccttg cgtgcttccg ccttggtctc caccacggcg aagggcgcag
     1801 tggggatgcc gtagaagctg aggatctcct tggtccggcc cttgtggagc gtgagtgaga
     1861 gggccagggg gtcggacgca tggcacggaa tcccgaagaa ctcgcagatc gccgggacat
     1921 gcccttcccg gttgggcccg tagagtccct cggcgatgtt gaagacgaaa tcgggtcggg
     1981 cttcgcgcaa ccggtcgggg aactgctggt cggcttctag ccgcaccacc tcacccagag
     2041 gcgcaagggc ccgctccacc gcatcgatgg tctcgggttc gtcccattcc gcgtagaggt
     2101 cgggctgctc cagctcggga tggagcgccc ggcgagcatg acgcggattc ttggaggtgg
     2161 cggtgggtgg ggtcgcatcg ccagaaacgg aaggcgacgg cttgaggttg aaggccaacc
     2221 cgattcggac gggcaaagaa gtcctcaata aacagcgtta ctgtaatctg cgtttttttt
     2281 gttgcgccca caatacgtta gcgcatcgaa aacagctcta aggggtcgga aagtcggaaa
     2341 agccagaagg gtcggaagca ccctcacggc tctttccgac ccttccgacc ctaccgaccc
     2401 ttccaaccta tttcagaacg agcatctcgc ggtaggtagg aaggggccac agtcccgcct
     2461 cgatgtgggt ctccagctgg tcgatcacga ctcgcatatc cgccatggcc ggacgcacct
     2521 tgtccttgat atggcgggcg tggcccatgg gatcgtccag gtgatgggcc gaggccttct
     2581 ccagcgcgcc cagcgccttg cgaaaccgat tcatgaccgt ggtgaactca tccagggtgg
     2641 ccttggcgtc ggccgccttg ccgccggcag cctcggtggc cgccaccgtc ccggccagca
     2701 tggtctggtg tttgtacgcg gcgggaagca cctgggtccg ggccagggcg accatggtct
     2761 ccgcctcgat caccagctgt ttgacgaact tctcgatggt gatgtggctt cgggagtcga
     2821 gctccacctt ggacaggacg ccgtatttgc ggaacaggtc cacgttcttc ttggcggtga
     2881 ggatcgggaa ggcttcgacc gagtccttca tcatcggaag gccgcgtcgg gccgcctcct
     2941 tgtgccattc cgtcgtgtag ttgtcgccct ggaaaatcac ccgcttgtgc tgcttgaggg
     3001 tcttctgcag caaggaaacc gcggccaact gcagcttggc cgccgacccg ttgcgcccca
     3061 ccgccttctc cagctcgg
//
LOCUS       DASWKS010000609         3713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3292226, whole genome shotgun sequence.
ACCESSION   DASWKS010000609 DASWKS010000000
VERSION     DASWKS010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3292226"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VGA78_17345"
     CDS             complement(<1..777)
                     /locus_tag="VGA78_17345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX9895700.1"
                     /translation="MQTTQIRNIAIIAHVDHGKTTLVDQMLRQAGAFRVNQQVEERVM
                     DSNPLERERGITILAKNTAVQWHGVKINIVDTPGHADFGGEVERILRMVDGVLILVDA
                     AEGPMPQTRFVTRKALALGLKPIVAINKIDRQDAEPLRVHDEVLGLFIDLEASHDQLD
                     AAFFYTSSRAGTATADLSRPGTDLTPLFQAILDHVPAPSGNTDGPFQMLISTLDYSSY
                     LGRLGIGRIERGHARVGDPVALLPLGEPGLLPDDVPVEHNR"
     gene            1106..2425
                     /locus_tag="VGA78_17350"
     CDS             1106..2425
                     /locus_tag="VGA78_17350"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX9895701.1"
                     /translation="METPGLSSIVLRLAVVLALVLANAFFVAAEFALVGSRRTRLEEL
                     AQAGSRGAALARRAVEHLDRYISATQLGITLASLALGAVGEPFLARLVEAGFDGLPDP
                     FDAVATHSVAVAIAFGFITLLHIVLGELVPKAMALLHPERVSEWVAAPLMGFTWVMAA
                     PIAVLNRTANLVLRIFRIREPTAHERVHSPEEIRMLVEQSQEGGSLGQEDARLLEGVF
                     EFSEKTAEDVMTPRTQMVVLDADDSVETAADTIARAGRSRYPVYRETLDDVVGVVHAK
                     DVLTALRDRPGITVRSIMRQPLFVPGTREVEDVLADMKRLKVHLALVLDEYGGTAGLV
                     TMEDLLEEIVGPIYDEHDRPAAPVATDARLLDGSMSITEFNGEYDANLDDTDYTTLGG
                     FLFGHLGRLPKPGDRVEVPPFAFEIAAMEGRRVKAVRLVGGWKAVGK"
     gene            complement(2531..3472)
                     /gene="pdxA"
                     /locus_tag="VGA78_17355"
     CDS             complement(2531..3472)
                     /gene="pdxA"
                     /locus_tag="VGA78_17355"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:TIGR00557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX9895702.1"
                     /translation="MRIMPVKAGRPRIALTLGDPRGIGPEITSLALEGGLEAEVTLVG
                     PDDLIAFLPAAERVGVGAWNGGAGGSGSDARAQAMRAGTLAGRAIEIAARLALEGSVD
                     AMVTAPIEKHATRLAGFHYPGHTEWLAHLAGDVPVAMMLAADRLRVVLVTTHVAFRDV
                     PALLTTQRIIQTGRTTADGLRDWFGIAQPRLALCAVNPHAGEQGLFGDEEARVLEPAA
                     RALGAAGPLPADTVFVRAMRGEFDAVLAPYHDVGMTAIKVAAFGRGVNVTLGLPFPRT
                     SPDHGTAFDIAGLGKADPSSMIEAIRLAIEIGGRVKR"
     gene            3521..>3713
                     /locus_tag="VGA78_17360"
     CDS             3521..>3713
                     /locus_tag="VGA78_17360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895703.1"
                     /translation="MARRWSILVGLAVMALLAAPAGAQDKPAEPSILDLNAATRDQLI
                     AFPGIGAAYADKIIGGRPFR"
BASE COUNT          602 a         1249 c         1231 g          631 t
ORIGIN      
        1 ccggttgtgc tccaccggga catcgtccgg cagcaggccc ggctctccca gcggcagcaa
       61 ggcgaccgga tcgcccaccc gggcatgtcc ccgctcgatc cgtccgatgc ccagccgccc
      121 caggtagctc gagtaatcca gtgtggagat cagcatctgg aatgggccgt cggtgttgcc
      181 gctcggcgcc ggcacgtgat cgaggatggc ctggaacaac ggcgtgaggt cggtgcccgg
      241 acggctcagg tccgccgtgg ccgtccccgc ccggctcgag gtgtagaaga acgccgcatc
      301 gagctggtcg tgactggcct cgaggtcgat gaacaagccg agcacctcgt cgtggacccg
      361 cagcggctcg gcgtcctgcc ggtcgatctt gttgatggcg acgatgggtt tgagtcccag
      421 ggccagcgcc ttccgggtga cgaagcgggt ctgcggcatg ggaccttcgg ccgcatccac
      481 caggatcagc acgccgtcga ccatgcgcag aatccgctcc acttcgccgc caaaatcggc
      541 gtgccccggc gtatcgacga tgttgatctt gacgccgtgc cactgcactg cggtgttctt
      601 cgcgaggatg gtgatccccc gctcgcgctc cagcggattg gaatccatca cccgctcttc
      661 gacctgctga ttgacgcgga acgcaccggc ctggcggagc atctgatcca ccagcgtggt
      721 cttgccgtgg tcgacgtgcg cgatgatcgc gatgtttcga atctgagttg tctgcactgc
      781 gcctcattgc ctctcagggg aggggggaga ggggagacca atctctcgtc tcgtcacctg
      841 ctccctgctt cctgctccct gctccccggt ttcctgcccg tccggggcca tatatagagg
      901 atggcgtggg gtcgcgcaag gcactttccg aaacggcgaa gtggcgaaat cacgcgaggt
      961 tagagtcaat gccgaatgcc cagtgcccaa tgcccattgc agaaggacag cagcgggaag
     1021 gcgggcccca cctccgcaat gggcactggg cattcggcac tctcccttca ctcctccctc
     1081 gccccactaa attcccacct gacccatgga gactcccggg ctgtcgtcga tcgtgctgcg
     1141 gctggcggtg gtactggcgc tggtattggc caacgccttc ttcgtggcag ccgaattcgc
     1201 cctggtgggg tcgcgccgga cccggctgga ggaactggcc caggccggca gcaggggcgc
     1261 agcactggcc cgccgggcgg tcgagcacct ggaccgctac atctcggcca cccagctggg
     1321 gatcaccctc gcctctctgg cgttgggagc cgtgggggag ccgttcctgg cgcggctcgt
     1381 cgaggcgggc ttcgatgggc ttccggaccc gttcgacgcg gtggccaccc acagcgtggc
     1441 cgtggccatc gcgttcggct tcatcaccct gttgcacatc gtgctgggcg agctggtccc
     1501 caaagccatg gcgctgcttc accccgaacg agtcagtgaa tgggtcgcgg ccccgctgat
     1561 ggggtttacc tgggtgatgg cggcaccgat cgccgtgctc aaccggaccg ccaatctggt
     1621 gctccggatc ttccgaatcc gggaacccac cgcccacgag cgggtccact cccccgagga
     1681 aatccggatg ctggtggagc agagccagga aggcggctcg ctgggacagg aggacgcccg
     1741 gctgctggag ggagtattcg agttcagcga aaagaccgcc gaggacgtga tgacgccccg
     1801 gacccaaatg gtggtgctcg acgccgacga ctcggtcgag accgcggccg ataccatcgc
     1861 ccgggcgggc cgctcacgct atccggtgta tcgcgagacc ctggacgacg tggtgggggt
     1921 ggtccacgcc aaggacgtgc tgaccgcgct cagggaccgg cccggcatca cggtccgatc
     1981 catcatgcgg cagcccctct tcgtgcccgg aaccagggag gtggaagacg tgttggccga
     2041 catgaagcgg ctgaaggtgc atctggccct ggtcctcgac gagtacggcg gcaccgccgg
     2101 cctggtgacg atggaggatc tgctggaaga gatcgtgggg ccgatctacg acgagcacga
     2161 ccggcccgcg gctcccgtcg ccaccgacgc gcggctgctc gatggctcga tgtcgatcac
     2221 ggagttcaac ggcgagtacg atgcgaacct ggatgacacc gactacacga cactgggcgg
     2281 gttcctgttc gggcacctgg gccggctgcc caaaccaggt gaccgggtcg aggtgcctcc
     2341 cttcgcgttt gagattgccg cgatggaagg acggcgggtc aaggccgtga ggctcgtggg
     2401 agggtggaag gcagtgggga aataatcaat gcagagtgcc gaatgcccaa tgcccattgc
     2461 agaggttggc agaccggacc tcatccctac ttctgcattg ggccctgtgc attgggcatt
     2521 ctgcattcat tcaccgcttc accctcccac ctatttcaat cgcaagccga atcgcttcaa
     2581 tcatggaaga aggatccgcc ttcccgagtc cggcgatgtc gaacgcagtc ccatgatccg
     2641 gtgaggtccg cggaaacggc agccccagtg tcacattcac gccccggccg aacgccgcga
     2701 ccttgatcgc ggtcattccc acgtcgtgat agggcgcgag caccgcgtcg aattcgcccc
     2761 gcatggcccg tacgaaaacc gtatcggcgg ggagagggcc ggccgccccc agggcgcggg
     2821 ctgccggctc cagcacccgc gcctcctcat cgccgaatag tccctgttcc ccggcatggg
     2881 gattgaccgc gcagagcgcg agccgcggct gggcgatgcc gaaccagtcg cgcagaccgt
     2941 ccgccgtggt ccggccggtc tggatgatcc gctgggtggt gagcagcgcg ggcacatccc
     3001 ggaatgcgac gtgggtcgtc accaggacga cccgcagccg gtctgcggcc agcatcatgg
     3061 ccaccggcac gtcgcccgcc aggtgtgcga gccattcggt gtggccgggg tagtgaaacc
     3121 cggccagccg ggtggcgtgc ttttcgatgg gagcggtgac catggcgtcg accgaccctt
     3181 ccagcgccag ccgtgccgcg atttcgatgg cccggcccgc cagcgtaccg gcccgcatgg
     3241 cttgggctct ggcatcggac cccgagccgc cggccccgcc gttccaggcc ccgaccccaa
     3301 cccgctcggc ggcggggagg aacgcaatga gatcgtcggg accgaccagg gtcacctcgg
     3361 cctccaggcc cccctccaga gccagggacg tgatctccgg cccgatgcct ctgggatccc
     3421 ccagcgtcag ggcgatccgg gggcgtccgg ccttcactgg cattatcctc atggcccaat
     3481 actatacctg tcagtgcttc cccttttccc ggagatggat atggctcgga ggtggtcgat
     3541 actggttggc ctggccgtga tggccctgct ggccgcgccg gccggcgccc aggacaagcc
     3601 ggcggaaccc tcaatactgg acctgaacgc cgcgacccgg gatcagctga ttgccttccc
     3661 tggaatcggt gcggcctacg ccgacaagat catcggcggc cggcccttca ggc
//
LOCUS       DASWKS010000610        16892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2554517, whole genome shotgun sequence.
ACCESSION   DASWKS010000610 DASWKS010000000
VERSION     DASWKS010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 16892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2554517"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1101)
                     /locus_tag="VGA78_17365"
     CDS             complement(28..1101)
                     /locus_tag="VGA78_17365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX9895704.1"
                     /translation="MTSSRVATPADLKGRRIRFGLVGCGRIAEKHFEAFERHCAGAEL
                     TALCDLDAGAAERAAARTGAKRFPALDAMLAGADLDVVVLATPSGLHAGQAMEAAAAG
                     KHVVTEKPMATRWQDGQAMVHACDEAGVRLFVVKQNRRNPTIQLLKQAIDQGRFGRIH
                     LVTVSVLWSRPQSYYDSAPWRGTWEFDGGAFMNQASHYIDLLDWLIGPVQSVSAFTAT
                     LARNIQVEDTGVASIRWRSGALGSVSVTMLTYPQNLEGSITVIGEHGTVRVGGVAVNQ
                     IDHWEFAEPDASDALVEQASYDTTSVYGHGHIGYYDNVLQTLRGEAAAETDGREGLRS
                     LELLIGIYRSARDGRPVSLPLDY"
     gene            complement(1098..2345)
                     /gene="hflX"
                     /locus_tag="VGA78_17370"
     CDS             complement(1098..2345)
                     /gene="hflX"
                     /locus_tag="VGA78_17370"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX9895705.1"
                     /translation="MLVAAPRKGSADADHLTEHLDELSELVDTAGAVVVGRLSQQVAS
                     PNPATLIGEGKVEELRAAVADGNASLVIFDEELTPVQGTNLERELEVRVMDRAEVILD
                     IFSTRARSHEAKLQVELAQLEYLLPRLTRMWTHLSRIRGGIGLRGPGETQLETDRRMI
                     RRKIQHLRGKLKDVAMHREVVRSGRQPMLGVALVGYTNAGKSSILGALTGEHGIFVEN
                     RLFATLDTLTREVDLGEGARVRLTDTVGFIRKLPHHLVASFRATLEEATTADLLLHVV
                     DASHADWEEQVTVVDSVLAELELAERPRMLVFNKIDLLPDPQSFAARVLELHHGSVLT
                     TTMRTDGLQTLRQAIRDRAQEALPTVRVEVPATDGARLAALYRAGDVVAREDREDRVI
                     LTIRTEQWRADRLRAQGHRSPEA"
     gene            complement(2375..3709)
                     /locus_tag="VGA78_17375"
     CDS             complement(2375..3709)
                     /locus_tag="VGA78_17375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX9895706.1"
                     /translation="MTLFELPPPLAARMRPRNLEEFVGQEHLLAPGRALGDAVRRGTI
                     GSVVFWGPPGSGKTSLAYVIARYTDRQFVPFSAVTEGVQRVREIIREAEQRRALGRGT
                     ILFCDEIHRFNRAQQDAFLPHVERGTVTLIGATTENPSFELNGALLSRCQVYVLQRLG
                     ASAIERLLRMALADGERGLAGLTLTVDDRAIAIFAEEADGDARRALTVLEAAATLVGP
                     GGTISTETAREALALRIPTYDKSGEEHFNLLSAYHKSLRGSDPQAALYWMARMVDGGE
                     DPMTLFRRAIAMAAEDIGLADPQALQLAVAARDAFHMLGPPEGYLPLAEMTVYLATAP
                     KSNSTVLALKAALTAAKETPAAPVPLHLRNAPTGLLKALGYGKTYQYPHDDPSGYVGQ
                     QYLPDELAQMTFYQPGERGFERKIAERMAWWRQRAGEPASLDPAKEDPTSET"
     gene            complement(3706..4425)
                     /locus_tag="VGA78_17380"
     CDS             complement(3706..4425)
                     /locus_tag="VGA78_17380"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEX9895707.1"
                     /translation="MALTPLLLALAAAAGNLIGAMVLVRQSRRSLGWIDTSLAFGAGF
                     MLATVLVGVLPEVFDQADGATPLFILGGYLAVHLAHHVLTPHFHFGEETHHVSAAAGL
                     SALLGLSVHSFFDGVAIASGFLTSAHLGLLMFFAVLLHKLPEGVAIASVVMVGGRPGR
                     DAVLAGAALGGATVVGVLLTGIAEPLQTRGLALAAGVTLYVAASNLVPEFQHKRGWRS
                     PLAFFGGAAALLLVHLMDVVP"
     gene            complement(4416..5633)
                     /locus_tag="VGA78_17385"
     CDS             complement(4416..5633)
                     /locus_tag="VGA78_17385"
                     /inference="COORDINATES: protein motif:HMM:NF013871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEX9895708.1"
                     /translation="MGDPDAGHREPGADLLRQRVDLPAEVVAIAQRLEDAGFETWAVG
                     GALRDLLLDEGGSDVDLATAAPPEVVQRLFRHTVPVGLAHGTVGVLDPDRRLHEVTTF
                     RHDVATDGRHAIVQFGASLHDDLARRDFTINAIAYHPIRKEWADPFRGYADLRAGVVR
                     AVGNPAERFREDYLRILRAIRFAARFDFEIEPVTWSAAVAAASGLSGLSAERVRDEWF
                     KSLGSARSLPRLVRLWHEAGAARSWLPELHPDWPGADIAPAERDPVLLTAVAGSAPDV
                     ALRRLRASNAEIARAEAIVAGPAAPASQDPSPVRRWLARVGDAADDLLRVHRYLRGED
                     PPWAGVVSGIRARGEATTRAGLALTGSDLLELGLPAGPELGAMLDRLLGAVLDDPGLN
                     TRERLLEMARSWR"
     gene            complement(5626..6384)
                     /locus_tag="VGA78_17390"
     CDS             complement(5626..6384)
                     /locus_tag="VGA78_17390"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX9895709.1"
                     /translation="MISLEGKTALVTGGSRGIGRATALLLARAGADVGITYHSRAGDA
                     AAVVKEIRGSGRRAFHAGGDHADPAVVEQIFRGCAAAFGGLDIFVANHGVWPVEPVAL
                     ARMDDARWRSTLSVNLDGVFLTTRAALRLLRPGGRVVLVSSTAGQRGESYHADYAATK
                     GALISLTKSLCVECAPDLTVNCVAPGWVDTEMSHPAFEATADAREKIAETIPLRRIPP
                     AEDIAGPILFLCSDLARHITGEVLNVNGGSVLCG"
     gene            complement(6381..6953)
                     /locus_tag="VGA78_17395"
     CDS             complement(6381..6953)
                     /locus_tag="VGA78_17395"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX9895710.1"
                     /translation="MDAHTRIEAEFAALAALAVSSADQAAVLVTIAGRYREALRAGGT
                     LFFAGNGGSAADAQHIAAEYVVRFRTQRPALAAVALTVDTSVLTAAGNDLGFDRVFAR
                     QVEALCRPGDVLVLHSTSGNSANLIAAAQVARALGVTVIGFLGRDGGRLGALVDLAFV
                     VASEETSRIQEMHLVAEHAIAGLIDEEGSA"
     gene            complement(6953..7714)
                     /locus_tag="VGA78_17400"
     CDS             complement(6953..7714)
                     /locus_tag="VGA78_17400"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HEX9895711.1"
                     /translation="MIDLHSHLLPGVDDGSRSVEQSVKVLSRMAAAGITGVCLTPHLT
                     ATRSEQGIPAAYDDAFVRLRAAVPERMALHRGVEMMLDRHLPPQAAANRALTLGGSRY
                     LLVEFTRMAAPTAVTNAMGHIVGLGLVPLLAHPERYACCTPAVAAVWKGAGALLQVDA
                     NTLFMPRSRGERARQLVSAGLADILAADNHGDDRTVSAPFVSLCEQGGETQADLLLVR
                     NPTAILADRLTEDVPPLPLRTSFLDRLKHLLDPEG"
     gene            complement(7711..8016)
                     /locus_tag="VGA78_17405"
     CDS             complement(7711..8016)
                     /locus_tag="VGA78_17405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895712.1"
                     /translation="MMTAPTWLDVRTAGAPAALLERARSYLAAHDGPTEPAGQLAQAG
                     LAALAATVASAGDRSAALDLLAADALVTLALLARAERDPATLARFAAGIRDAGASSS"
     gene            complement(8013..10640)
                     /gene="alaS"
                     /locus_tag="VGA78_17410"
     CDS             complement(8013..10640)
                     /gene="alaS"
                     /locus_tag="VGA78_17410"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEX9895713.1"
                     /translation="MQAHQIRRLFLDYFAARGHQEVPSSSLVPADDPSLLFTNSGMVQ
                     FKRTFLGQEQRPYLRATTCQKCVRAGGKHNDLEQVGLTKRHHTFFEMLGNFSFGDYFK
                     DDAIAFAWEFVTGEQFLGLHPDRLWVTVHHSDPEARAHWRAISHLPDSRIFGLGDKDN
                     FWQMGDTGPCGPCSEIYVDLNWSDKSGRSAQSEITQAEFEAQAEAGRFLEIWNLVFMQ
                     FDRSADGTLTPLPKPSVDTGAGLERIASVLQGVDDNFHIDLFAPILDRAGELVGAPYP
                     RGLSGSGPSYRVLADHARAVAFLLLDGVYPSNEGRGYVLRRILRRAVRHAWLLGRREP
                     TLAPLTGTVVDLMGEAYPELTGKREFIREVTETEELRFLETVEGGLRRLEELFASGVS
                     TIPGEEAFRLYDTFGFPVDLTQLIAGERGIAVDIAGFDIALEGQRARSREARRGPAGP
                     ALQTGGKRKSWRSIKRGRQKFVGYETTEADTDILAFRQDGDRVDLLLHRNPFYAESGG
                     QVSDTGTLTGPDWSIGVDQVRKDERGTVLSGRFADSFEPSDVRAAVDAARRRNIERNH
                     SATHLVHWALRAGLGSHVRQQGSLVEPDRLRFDFSHHGPIEPEQLERIEREVNQQIWE
                     NSRVDTREMRYTDALALGAMAFFSEKYGDLVRVVTMGPSIELCGGTHVRTTGALGLFR
                     ITGQAGVAAGVRRIEAVTGPVAYDEVDRIEGRLRDVATALKAQPEHVARRLEQLLVDR
                     ARLEARLAEALKSGGSSVSEETTVDLSGVRLTLGETSSEDREELGQVVDRFRSGKEKS
                     VLVLFGTEGRGAVHVALSDDLVREGRRAGDLVNRIAALSGGRGGGRPHCASAGAGDPD
                     RLGAARDAAPGLVEEWLRA"
     gene            complement(10743..11393)
                     /locus_tag="VGA78_17415"
     CDS             complement(10743..11393)
                     /locus_tag="VGA78_17415"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HEX9895714.1"
                     /translation="MVPTTEAADPVRVSGIVPDAHHPGTVRVQVGGRALLTVPQEALA
                     RLGIQVGAELDPGQHTALCQAADAEAAYRAALLCLGRRPYARRDLARRLVMRGHPPGA
                     ADQAVERATTVGLLDDATFARHFIQTRSARGRGPARLRRELVGMGVPPLLVDRVLAEE
                     TPQDGHEAVAALIRKRAAQLREVPRAERVRRVIAYLARRGYTGVEARRAVRELLPS"
     gene            complement(11377..12429)
                     /gene="recA"
                     /locus_tag="VGA78_17420"
     CDS             complement(11377..12429)
                     /gene="recA"
                     /locus_tag="VGA78_17420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEX9895715.1"
                     /translation="MASDESRQDAERRKALNLAISQIEKQLGKGSIMRMGTDRPREQV
                     LAISTGAINLDAATGVGGIPRGRITEVYGPESSGKTTLCLHLVANVQKSGGVAAYVDA
                     EHALDIEYARKLGVNIEDLLVSQPDTGEQALEIVEILVRSGAVDLVVIDSVAALVPKA
                     EIEGDMGDSHMGLQARLMSQALRKLAGAINRSNSAVVFINQLREKIGVMFGNPETTTG
                     GKALKFYASLRLDIRRIGPVKEREAIIGSRVRVKVVKNKVAPPFKQAEFDVLFDEGIS
                     HTSLLVDLAAEGNIIQKSGAWYSYGDQRIGQGRENAKLFLRDNPQLMTEVEARVKELL
                     GVRPLAGAGADDGADD"
     gene            complement(12536..12934)
                     /locus_tag="VGA78_17425"
     CDS             complement(12536..12934)
                     /locus_tag="VGA78_17425"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX9895716.1"
                     /translation="MARRRSSVPVTQWTDPRHVRGFQGEQAALAMLSARGWIIEAHRF
                     RAGRHDIDLVVRRNDLVAFVEVKTRASAAYGAPEQAIGWGKRRVLAWVASVWAARFGQ
                     PGYRYRFDVVTVWLSPGGPTLRHLEDAWRP"
     gene            13066..14856
                     /locus_tag="VGA78_17430"
     CDS             13066..14856
                     /locus_tag="VGA78_17430"
                     /inference="COORDINATES: protein motif:HMM:NF044362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9895717.1"
                     /translation="MHTPLEGLLPVPEDGPTDVAYWRLRILDATLLATAALGLLTLIP
                     SALLLLREGRPLVVIMDLVAYGTILVVTFRKSLPYDFRARVLVGGTYLLSLVLITSVG
                     PRGSGLHFLGAVPVLAALLFGLRAAVMALALQILTLVGFGAAIAAGAFAWLAPRYPDQ
                     LVIWTVVGVNLVFLSAILSLSISALLRGLEITIGKWRQGAEALQAERRSLEHAYATLE
                     RETTERANLEAQLRQSQKLEALGTLAGGIAHDFNNLLQPIMAQAEIVQSGLPPDHVDR
                     QRLEDILLSAERARDLVRRILTFSRRAEPRRGALRLAEPVREVAALLRSTLPAGIHID
                     AVVRDEAAFIHAEGTEVIQMLMNLAMNSYHAMRREGGRLQIVVEDASVDDLVRLAVRD
                     TGTGMDRATVERAFDPFFTTKEPGEGTGLGLSTVHGIVTALAGRIRLVSEPGAGTEVE
                     MLFPRVQGPGAVAPTTLGRRPASARVLLVDDEASVLAVAGTQLRHLGYHVEAVQLPEA
                     ALDRIRRDPQAFDVLITDHGMPGMSGLALAQASRAVAPELPVILMTGYLDEPTRSDAL
                     EGAVSAVLPKPFRLGNLTEVLTKVLGTTEY"
     gene            complement(14869..>16892)
                     /locus_tag="VGA78_17435"
     CDS             complement(14869..>16892)
                     /locus_tag="VGA78_17435"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX9895718.1"
                     /translation="VGFAGFDRLPLLDMKRAAVLVTGLSVLVPFLTAVITGVDEQAFL
                     TPATIGARLSGVAPAFLAQAVTGVVGQLGGMLVGFLALTGLTLGTIAWHPLQRLERTE
                     RPTNPRGSAVVTLADDEPEVEEGNGSMPPRLVVPSPRRAKTPKSAKEPPPRVVPREVA
                     AQLPPIDLLTPPPPQDTAADAAQLDRLGELLLEALRTFKVDGSIAGRTSGPVVTQFEV
                     VPAPGVKVGRIVALSDDLAIKMRTPSVRVAPIPGKGAVGVEVPNPTARIVTLRELLAS
                     SEWDRSRSVLPVALGKDLEGRPVITDLAKTPHLLIAGATGSGKSVTINTIITGLVYRY
                     TAKELRFLMVDPKMVELSMYNALPHMRHRVVTDSRDAATVLKWAVWEMGRRYELLHAN
                     GARNVGDFNHKVHEGKELRLPVPAARTLATVAAEAPDTPPPPPETTVYTEGLLPYIVI
                     IVDELADLMMTVQAEVETPLALLAQKARAIGIHLILATQRPSVNVITGLIKANFPSRV
                     AFRVASKVDSRTILDQNGAEALLGNGDMLFLPPGKSEPQRIQGAYIATDETEQLMRWF
                     DGRRAAAAAAAAAEPDILEVIRLQEADDDEGGPVEPGERDPLFRQAAEICIQNLGGST
                     SLLQRRLKIGYGRAARIIDQLHEAGILGPSEGARGREVLIGLSQLDEYA"
BASE COUNT         2673 a         5891 c         5702 g         2626 t
ORIGIN      
        1 acagctaacc gtgaacggtg ggacccttca gtagtcgaga ggcagtgaga ctggtcgacc
       61 atctctggcc gaacggtaga tcccgatcag cagctcgagc gaacgcaacc cttcgcgccc
      121 gtcggtttcg gcggccgcct cgccccggag ggtttggagc acgttgtcgt agtagccgat
      181 atggccatgc ccatacaccg atgtggtgtc gtaactggcc tgctcgacca gggcgtcgct
      241 ggcgtcgggc tcggcgaact cccaatgatc gatctggttg acggcgactc cgcccacccg
      301 caccgtgccg tgctcaccga tcacagtgat ggagccctcc aggttctggg gataggtgag
      361 catggtgaca ctcaccgagc cgagcgcgcc gctacgccag cggatcgacg cgacgccggt
      421 gtcttccacc tggatgttcc gcgccagggt ggcggtgaag gcgctgacgc tttgcaccgg
      481 cccgatcagc cagtcgagca gatcgatgta gtggctcgcc tgattcatga acgccccgcc
      541 gtcgaactcc caggtgccac gccagggcgc gctgtcgtag tacgattggg gccggctcca
      601 cagcacgctg accgtcacca agtggatccg gccgaagcgc ccctggtcga tggcctgctt
      661 gagcagttgg atggtgggat tgcggcggtt ctgtttgacg acgaagagcc gcacccccgc
      721 ctcatcacag gcgtgcacca tcgcctgccc gtcctgccag cgggtggcca tcggcttctc
      781 ggtgacgacg tgtttgccgg cggccgcggc ctccatcgcc tggccggcgt gcagcccgct
      841 cggggtcgcc agcaccacca cgtccaggtc ggcgccggcg agcatggcat cgagcgccgg
      901 gaaccgtttg gcgccggtgc gtgccgccgc gcgctccgcc gcaccggcgt cgaggtcgca
      961 cagcgcggtc agctcggccc ccgcgcaatg ccgctcgaag gcctcgaagt gcttctccgc
     1021 gatccggccg cagcctacca gtccgaaacg aatccgccgg cccttgagat ccgccggggt
     1081 ggccacgcgg ctcgaagtca tgcctcgggg ctcctgtgac cctgggccct gagccgatcg
     1141 gcccgccact gctcggtccg gatggtgagg atcacccgat cctcccggtc ttcgcgcgcc
     1201 actacgtccc cggcccggta gagcgccgcc aatcgggcgc cgtcggtagc cggcacctcg
     1261 acccgcacgg tgggaagcgc ttcctgagcc cgatcccgga tcgcctggcg cagggtctgg
     1321 aggccatcgg ttcgcatggt ggtggtgagc accgatccgt ggtgcagctc gaggactcgg
     1381 gcggcgaacg attgcggatc gggcaggagg tcgatcttgt tgaacaccag catacggggg
     1441 cgttcggcca gttccagctc ggccagcacg gagtcgacca ccgtcacctg ctcctcccag
     1501 tcggcgtgac tggcatccac cacgtgcagc agcaggtccg ccgtggtggc ctcctccagc
     1561 gtggcccgga agctcgcgac caggtggtgg ggcagcttgc ggatgaaccc gacggtatcg
     1621 gtgagccgca cccgcgcccc ctcccccaga tccacttcgc gggtcagggt gtcgagagtg
     1681 gcgaacagcc gattttcgac gaagatgccg tgctcgccgg tgagggcgcc gaggatgctc
     1741 gatttcccgg cgttggtgta acccaccagc gccacaccca gcatgggctg ccggcccgac
     1801 cgcacgactt cgcggtgcat cgctacatcc ttgagcttgc cacgcaggtg ctggatcttg
     1861 cgccggatca tccggcggtc ggtttcgagc tgggtttcgc ccggcccccg gagaccgatg
     1921 ccgccgcgga tacgggacaa gtgggtccac atgcgggtca ggcggggaag caggtattcg
     1981 agctgggcca gctccacctg cagcttggct tcgtgactgc gggcgcgggt ggagaagata
     2041 tcgaggatca cctccgcccg gtccatcacc cgcacctcga gctcgcgctc gaggttggtg
     2101 ccctggaccg gggtcagctc ctcgtcgaag atcaccaacg acgcgttgcc gtcggccacc
     2161 gcggcgcgca actcctccac tttcccttcg ccgatcaggg tggcgggatt gggcgaagca
     2221 acctgctgag agagtcggcc gacgacgacg gcgccggcgg tatccaccag ctccgacagc
     2281 tcgtcgaggt gttcggtaag atggtcggca tcggcgctgc ccttgcgtgg cgcagcgacc
     2341 aacatcgccc gctccactgg atcgcgcacg gtaatcaggt ctcggatgtg gggtcctcct
     2401 tcgctggatc taaactagcc ggttctccgg cacgctgccg ccaccaggcc atgcgttcgg
     2461 cgatcttccg ctcgaatccg cgctcgcccg gctggtagaa cgtcatctgg gcgagctcat
     2521 ccggcaggta ctgctgcccc acatagcccg acggatcgtc gtggggatac tggtaggtct
     2581 tgccgtagcc cagcgccttc aggagcccgg tgggggcatt gcggaggtgg agcgggaccg
     2641 gtgccgccgg ggtctccttg gccgccgtca acgcggcctt gagggccagc accgtggaat
     2701 tggacttggg cgccgtcgcc aggtagaccg tcatttccgc cagaggcagg taaccctccg
     2761 gcggccccag catgtgaaac gcgtcccgcg ccgcgaccgc gagctgcagc gcctggggat
     2821 cggccaggcc gatgtcctcc gccgccatcg cgatggcgcg gcggaacaag gtcatcgggt
     2881 cttcgccccc gtccaccatc cgcgccatcc aatagagcgc cgcctgcgga tcgctgccgc
     2941 gcagcgactt gtggtaggcc gagagcaggt tgaaatgctc ttcgccactc ttgtcgtagg
     3001 tcgggatccg gagggccagg gcctcgcggg cggtctccgt gctgatggtg ccgcccggcc
     3061 ccaccagcgt ggccgccgct tccagcaccg tgagcgcccg gcgggcatcg ccgtcggctt
     3121 cttccgcgaa gatggcgatg gcgcggtcgt ccaccgtaag cgtcaggccg gcgaggcccc
     3181 gttcgccatc ggccagcgcc atgcggagca gccgttcgat ggcgctcgcg cccagccgtt
     3241 gcagcacgta gacctggcag cgtgacaaca gcgccccgtt cagctcgaag ctgggattct
     3301 cggtcgtggc gccgatcagg gtcacggtcc cgcgctccac atgcgggagg aacgcgtcct
     3361 gctgggcccg gttgaaacgg tggatctcat cgcaaaagag aatggtgccg cgacccaggg
     3421 cccggcgctg ttccgcctcc cggatgatct cgcgcacccg ctgcacccct tcggtgacgg
     3481 cgctgaaggg aacgaactgc cgatcggtgt atcgcgcgat gacgtaggcc agcgaggtct
     3541 tgccgctgcc gggaggtccc cagaagacga cgctgccgat ggtgccccgc cggacggcgt
     3601 cacccagggc ccggcccggc gccagcagat gctcctgccc gacgaattcc tccaggttcc
     3661 gcggccgcat tcgggcggcc agcggcggcg gcagctcgaa gagggtcacg gcacgacgtc
     3721 catcagatgc accagcagca acgcagcagc gcctccaaag aacgccaggg gggaccgcca
     3781 gccgcgtttg tgctggaact cggggaccag attcgaggcc gcaacgtaga gggtgactcc
     3841 ggcggccagc gccagacccc gggtctggag cggctcggcg attccggtga gcagaacgcc
     3901 gacgaccgtg gcgccgccca gcgcggctcc ggccaggacg gcgtcgcggc ccggccttcc
     3961 tcccaccatg acgacactcg cgatggcgac tccctcgggc aatttgtgca gcagcaccgc
     4021 gaagaacatc agcaggccca aatgggccga ggtgaggaag ccgctcgcga tggccacgcc
     4081 atcgaagaag ctgtggaccg acaagcccag cagcgcactc aaaccggccg cggcgctcac
     4141 gtggtgggtc tcttccccga agtggaagtg gggggtgagc acgtgatgag ccaggtgcac
     4201 ggctagataa ccgcccagaa tgaacagcgg cgtggcgccg tcggcctgat cgaacacctc
     4261 cggcaacacc cccaccagca cggtcgcgag catgaacccg gcgccgaacg ccaggctggt
     4321 gtcgatccat cccaacgacc ggcgcgattg ccgcaccagc accatcgccc cgatcaggtt
     4381 gccggccgcg gcggcgaggg cgaggaggag cggggtcagc gccacgaccg cgccatctcg
     4441 agcagccgct cccgggtatt gaggccggga tcgtccagca ccgcgccgag cagccggtcg
     4501 agcatcgcac cgagctccgg cccggcggga aggccgagct cgagcagatc gctgccggtc
     4561 agggcgagtc ccgctctggt ggtagcttcg ccccgggctc gaataccgct gaccaccccg
     4621 gcccagggcg gatcttcacc ccggagatag cggtggaccc ggagcaagtc atccgccgca
     4681 tcccccaccc gcgcgagcca gcgccgcacc ggggatggat cctgcgacgc tggggcggcg
     4741 gggccggcga cgatcgcttc cgcgcgggcg atttcagcgt tggacgcccg gagccggcgc
     4801 agcgccacgt cgggagccga gccggccacc gccgtcaaca gcaccggatc gcgctccgcg
     4861 ggagcgatgt cggcaccggg ccagtccggg tgaagctcgg gcaaccagct gcgcgcggcg
     4921 cccgcctcat gccacaaccg caccaggcgt ggcagggacc gggccgagcc caggctcttg
     4981 aaccactcgt cgcgcacccg ttcggccgag agtccgctca atccgctggc cgccgccacg
     5041 gcagccgacc aggtgaccgg ctcgatctcg aaatcgaatc gggccgcaaa gcggatcgcg
     5101 cgcaggatcc tgagatagtc ctcccggaag cgttcggcgg ggttcccgac ggcccggacc
     5161 acaccggccc gcaggtcggc gtagccacgg aacggatcgg cccattcctt ccggattggg
     5221 tggtaggcga tggcgttgat ggtgaaatcg cgccgggcca ggtcatcgtg aagcgacgca
     5281 ccaaactgca ctatcgcgtg gcggccatcg gtggcgacgt cgtggcggaa agtggtgacc
     5341 tcgtgcagcc ggcggtccgg atccagcacg cccacggtgc cgtgcgcgag cccgaccggc
     5401 acggtgtggc gaaacagtcg ctgcaccacc tcgggcgggg cggccgtggc cagatcgacg
     5461 tcgctcccgc cttcgtcgag cagcaggtcg cggagcgcgc cgcccacggc ccaggtctcg
     5521 aaccccgcgt cttccagccg ctgggctatc gccacgacct cggcgggaag atcgacccgt
     5581 tgccgaagca gatcggcgcc cggctcccgg tgccctgcgt ccgggtcacc cacaaaggac
     5641 gctgccccca ttcacgttga gcacttcacc ggtgatgtgg cgcgccagat cgctgcagag
     5701 aaacagaatg ggcccggcga tgtcttccgc cggcggaatg cgcctgagcg ggatggtctc
     5761 ggcgatcttc tctcgggcgt cggccgtggc ctcgaaggcg gggtggctca tttcggtatc
     5821 gacccagccg ggcgctacgc agttgacggt caggtcgggg gcgcattcca cgcagagcga
     5881 cttggtgagc gagatcagcg cgcccttggt ggcggcgtaa tcggcgtggt aggactcgcc
     5941 ccgctgaccg gccgtactcg acaccagcac cacccgccca ccgggccgca gcaggcggag
     6001 ggcggcgcgg gtcgtgagga acaccccgtc cagattgacg gagagggtcg atcgccagcg
     6061 ggcgtcgtcc atccgggcca gcgccaccgg ttccaccggc cagaccccgt ggttggccac
     6121 gaagatatcc aacccgccga aggcggccgc gcagccccgg aagatctgct ccaccaccgc
     6181 ggggtcagcg tgatcgccac cggcgtgaaa ggcgcgccgg ccggagccgc gaatctcttt
     6241 gaccaccgcg gccgcgtcgc cggcccggga gtggtaggtg attcccacat ccgcgccggc
     6301 gcgggccagc agcaacgcgg tggcccggcc gatcccgcgg gatcctccgg tgaccagcgc
     6361 ggtcttgccc tccaggctga tcatgcactc ccctcctcgt cgatcaggcc ggcgatggcg
     6421 tgctccgcca ccaggtgcat ttcctggatc cggctggttt cctccgacgc caccacgaac
     6481 gccaggtcca ccagggcacc gagccggcca ccgtcccggc ccagaaatcc gatgacggtc
     6541 acgcctaacg cgcgggcgac ctgggcggcc gcgatcaggt tggcgctgtt tccgctggtg
     6601 ctgtggagca ccagcacatc gcccgggcgg cacagagcct ccacctggcg ggcaaacacc
     6661 cgatcgaatc ccagatcgtt gccggcggca gtgaggacgg aggtgtcgac cgtgagggcc
     6721 accgccgcga gagccgggcg ctgcgtgcga aaccgaacca cgtattcggc ggcgatgtgc
     6781 tgcgcgtcgg cggcgctgcc gccgttgccc gcgaagaaca gggtgccgcc ggcccgcaat
     6841 gcctcgcggt agcggccggc gatcgtcacc agcacggcgg cctggtccgc gctgctcacc
     6901 gccagcgcgg ccagcgccgc gaactcggcc tcaatacggg tgtgggcgtc catcagccct
     6961 ccgggtcgag caggtgcttg agccggtcca gaaacgaggt gcggagcggg agcgggggga
     7021 cgtcttcggt caatcggtcg gccaggatcg cggtcgggtt tcgcaccagc agcaggtcgg
     7081 cctgggtctc tcccccctgc tcgcagagcg acacgaaggg cgccgagacg gtgcggtcat
     7141 cgccgtgatt gtcggctgcc aggatatcgg ccagccccgc actcaccagc tggcgggccc
     7201 gttcgccccg cgagcggggc atgaacaggg tgttggcatc cacctggagc agcgcgccgg
     7261 cacccttcca gacggccgcc accgccgggg tgcagcaggc gtagcgctcc ggatgggcca
     7321 agagcgggac cagccccaac cccacgatgt gccccatggc gttggtaacg gcggtcggcg
     7381 cggccatccg ggtgaattcc accagcagat agcgcgaccc acccagggtc agcgctcgat
     7441 tggccgcggc ctgcggcggc aggtgacggt cgagcatcat ctcgactccg cggtgcagcg
     7501 ccatccgctc cggcaccgct gcccgaagcc tgacgaaggc gtcgtcgtag gccgccggga
     7561 taccctgctc cgaccgggtg gcggtgaggt gtggcgtcag gcagacgccg gtgatgccgg
     7621 ccgcggccat gcgggacaac accttcactg attgctccac cgagcgggaa ccgtcgtcga
     7681 cgccgggcag aagatgagag tggagatcga tcacgagctg ctggcgccgg cgtcccggat
     7741 cccggcggcg aaccgggcga gcgtggcggg atcgcgctcg gcccgtgcca ggagcgcaag
     7801 agtcaccagg gcgtcggccg cgaggagatc gagggccgcg gatcgatctc cggccgaggc
     7861 cacggtggcg gccagcgcgg ccaggcccgc ctgcgccaac tgcccggccg gctcggtcgg
     7921 gccgtcgtgc gccgcgaggt agcttcgggc tcgctcgagc agcgcggccg gagcgcctgc
     7981 ggtccggacg tcaagccagg tgggtgcggt catcatgcgc gaagccactc ctcgaccagc
     8041 cccggagcag catcccgcgc cgcacccagc cgatcggggt ctcccgcccc ggccgaagca
     8101 caatggggcc ggcccccgcc ccgtcctccg ctgagagccg cgatccggtt gaccagatcg
     8161 ccggcccggc gcccttcgcg caccaggtcg tcgctcagcg ccacgtggac cgcgccccgg
     8221 ccttcggtcc cgaagagcac cagcaccgac ttttctttgc cgctgcggaa gcgatccacc
     8281 acctgcccca gctcctcgcg gtcctccgag ctggtttcac ccagcgtgag ccgaaccccg
     8341 ctcaggtcca cggtggtttc ctccgagacc gacgatcccc cgctcttcag ggcctcggcc
     8401 aaccgagcct cgagcctggc ccggtccacc agcagctgct ccagtcgccg ggccacgtgc
     8461 tcgggctggg ccttgagcgc ggtggcgacg tcccgcaggc ggccttcgat ccggtcgact
     8521 tcgtcatagg cgaccggccc ggtgacggct tcgatccgac ggacgcccgc ggctactccg
     8581 gcctgtcccg tgatccggaa caggcccagc gcgccggtgg tacgaacgtg ggtccccccg
     8641 cacagctcga tggacggtcc catggtcacc acccggacca gatccccgta tttctcggag
     8701 aagaacgcca tggcgccgag tgccagcgca tcggtatagc gcatctcgcg ggtgtcgacc
     8761 cgggaattct cccagatctg ctggttgacc tcgcgctcga tccgttccaa ctgctccggt
     8821 tcgatcgggc catgatggct gaagtcaaag cgcagccggt cgggctccac cagcgatccc
     8881 tgctgccgga cgtggctgcc taacccggct cgtaacgccc aatgcaccag gtgcgtggcg
     8941 ctgtgattgc gctcgatgtt gcggcgccgg gcggcgtcga ccgcggcccg cacgtcgctc
     9001 ggctcgaagc tgtccgcgaa ccggcccgac aggacagtgc cccgctcgtc cttcctcacc
     9061 tggtcgaccc cgatcgacca gtcggggccg gtcagcgttc cggtatcact gacctgcccg
     9121 cccgattcgg catagaacgg attgcgatgg agcaacagat ccacccggtc tccgtcctgc
     9181 cggaaggcca ggatatcggt gtccgcttcg gtggtttcgt agccgacgaa cttctgccgg
     9241 ccccgcttga tcgaccgcca gctcttgcgt ttgccgccgg tttgaagcgc cggtccggcg
     9301 gggccgcggc gggcctcgcg ggaccgggcc cgttgccctt ccagggcgat gtcgaacccg
     9361 gcgatgtcga cggcgatgcc gcgctccccg gcgatgagct gggtcagatc gactggaaac
     9421 ccgaaggtgt cgtacagccg gaacgcctcc tcgccgggaa tggtcgacac ccctgaagcg
     9481 aacagctctt ccagtctccg gagtcccccc tcgaccgttt ccaggaagcg gagctcctcg
     9541 gtttcggtga cctcgcggat gaattccctc ttgccagtca gctcgggata ggcctcaccc
     9601 atcagatcga cgacggtgcc ggtgagcggg gccagtgtcg gttcacgccg gcccagcagc
     9661 caggcgtgtc gcaccgcccg ccggaggatc cgccgcagga cgtagccccg gccttcgttc
     9721 gagggataca ctccatccag cagcagaaac gccaccgcgc gggcgtggtc cgccagaacc
     9781 cggtacgatg ggcccgagcc cgacagaccg cgcgggtacg gggcgccgac cagctcaccg
     9841 gcccggtcga ggataggggc gaacaaatcg atgtgaaagt tgtcgtccac tccctgcagc
     9901 actgacgcga tccgttccag cccagcaccg gtatcgactg aaggcttggg aagcggcgtg
     9961 agggtcccgt ccgccgagcg gtcgaactgc atgaacacca ggttccagat ttccagaaac
    10021 cgccccgctt cagcctgcgc ttcgaactcg gcctgggtga tctccgactg ggccgacctt
    10081 cccgacttgt ccgaccagtt caaatcgaca tagatctcgg agcatgggcc acacggcccg
    10141 gtgtccccca tctgccagaa gttgtccttg tcacccagcc cgaaaatgcg gctgtcggga
    10201 aggtgcgaga tggcgcgcca gtgggcccgt gcttccgggt cggaatggtg cacggttacc
    10261 cagagccggt ccgggtggag tcccaggaac tgctctccgg tcacgaattc ccaggcgaac
    10321 gcgatggcgt catccttgaa gtagtcaccg aaggagaagt tgcccagcat ctcgaagaaa
    10381 gtgtggtgcc gcttggtgag ccctacctgc tcgagatcgt tgtgcttgcc accggcccgc
    10441 acgcacttct ggcaggtcgt ggcgcgcagg tacgggcgct gctcctgacc gaggaaggtg
    10501 cgcttgaact gcaccatgcc cgaattggta aagagcagcg acgggtcgtc ggcgggaacc
    10561 aatgacgacg agggcacttc ctggtgcccc cgtgcggcga agtagtcgag aaacagccgt
    10621 cggatctgat gagcctgcat gagagcaata tagagtgcag actggggagt gccgagggca
    10681 gaatgcagag gggcaaagcc tttttgcatc aatgcgttcg gcgctctgaa acagtcggca
    10741 tttcagctgg gcaggagttc cctcaccgcc cggcgggctt cgaccccggt gtacccccgg
    10801 cgcgccaggt aggcgatcac ccgccgaacc cgttcggctc gggggacttc ccgaagctgc
    10861 gccgcccgct tgcgaatcag cgcggccacc gcctcatggc catcctgggg ggtttcctcc
    10921 gccagcaccc ggtccaccaa gagcggtggc acacccatgc cgaccagctc cctgcggagc
    10981 cgggctgggc cgcggccgcg ggccgaccgg gtctgaatga aatgacgggc aaaagtggca
    11041 tcgtcgagca gccccaccgt ggtggcccgc tcaaccgcct ggtcggccgc cccgggtgga
    11101 tggccccgca tgaccagccg tcgggccaga tcgcgccggg cgtagggacg gcgtcccaaa
    11161 cagaggagcg ccgcccgata cgccgcttca gcatcagctg cctgacagag cgcggtatgt
    11221 tggcccgggt cgagctcggc gcccacctga atgccgagcc tggccagcgc ttcctgcggg
    11281 acggtcaaca gcgccctgcc acccacctgg actcgaaccg ttcccgggtg atgggcgtcc
    11341 gggacgatgc cactcacccg gacgggatcg gcggcctcag tcgtcggcac catcgtcggc
    11401 accggccccg gccagcgggc ggacacccag gagctccttc acccgggctt cgacctcggt
    11461 catgagctgc gggttgtcgc gcaggaacag cttggcgttc tcccggccct gcccgatgcg
    11521 ctggtcacca taggaatacc aggcaccgga tttctggatg atgttgccct cggcggctag
    11581 atccaccagc agggacgtgt gactgatgcc ttcgtcgaag agcacatcga actcggcctg
    11641 cttgaacggc ggcgccacct tgttctttac caccttgacc cgcacccggc tgccgatgat
    11701 ggcctcgcgc tccttgaccg gaccgatccg gcggatgtcg agccgcagcg aggcgtagaa
    11761 cttgagagcc ttgcctccgg tggtggtctc ggggttaccg aacatcacgc caatcttctc
    11821 gcgcagctgg ttgatgaaca ccacggcgct gttggaccga ttgatggccc ccgccagttt
    11881 gcgcagcgcc tggctcatga gacgggcctg aaggcccatg tggctgtcac ccatgtcgcc
    11941 ctcgatctcg gccttgggca ccagggccgc cactgaatcg atgaccacca gatccaccgc
    12001 ccccgaccga accagaatct cgacgatctc cagcgcctgc tcaccggtgt cgggctgcga
    12061 caccagcaga tcttcgatgt tgacgcccag cttccgggca tactcgatgt ccagggcgtg
    12121 ctcggcgtcg acgtacgcgg ccacaccccc ggacttctgg acgttggcca ccaggtggag
    12181 acacaacgtg gtcttgcccg acgactccgg gccatacacc tcggtaatcc ggccccgggg
    12241 gatgcccccc acacccgtgg cggcatcgag gttgatggcg ccggtggata tggccagcac
    12301 ctgttcccgg ggccggtcag tgcccatccg catgatggag cctttgccca gctgcttctc
    12361 gatctggctg atggcgagat tcagggcctt gcggcgctcc gcgtcctgcc gggactcatc
    12421 cgacgccatt tgtgacctca cttgataggt gtgtgacgcg aatcgcaaca caaagatatc
    12481 tacaacacaa gctaataccg aacattatcc gaacacaata gccactcgga gccgttcaag
    12541 gcctccaggc atcttccagg tgcctcaggg tcgggccccc ggggctgagc cagaccgtga
    12601 ccacgtcgaa gcggtagcgg taccccggct ggccaaaccg ggcggcccag actgacgcga
    12661 cccaggccag aactcgccgc ttgccccacc cgatggcctg ttcgggcgcc ccgtaggccg
    12721 ccgaggcgcg ggtcttcacc tcgacgaacg ccaccaagtc gttccggcgc accaccaggt
    12781 cgatatcgtg ccggccggcc cggaagcggt gagcctcgat gatccacccc ctggcactca
    12841 gcatggcgag cgcagcctgc tctccctgga agccgcgcac gtggcgcggg tcggtccact
    12901 gggtgactgg aacagagctg cgacgccgag ccacggggtg aatctggggc gggaggcagg
    12961 gggaggcgtc atcccgagaa cgcgaacggg acccgaaaca tctcgcgtct tccgtgtcac
    13021 aaacccggtc agtcgggggg tgtaggtatt gcactccacc gggccatgca caccccactc
    13081 gaagggctgc taccagtccc cgaggacggt cccaccgacg tcgcctattg gcggcttcgg
    13141 atcctcgacg ccaccctcct cgcgaccgcg gcactcggac tcctgacgct gattccgagc
    13201 gccctgttgc tgctgcgcga ggggcggccg ctggtggtca tcatggattt ggtggcctac
    13261 ggcaccatcc tggtcgtgac cttccggaaa agtctgccgt acgactttcg agcccgggtc
    13321 ctggtgggtg ggacgtacct gctctccctg gttctgatca cctcggtggg acctcggggc
    13381 agcggtctgc atttcctggg tgccgtcccg gtgctggcgg cgttgctgtt cggcctgcgg
    13441 gccgccgtca tggcgctcgc ccttcaaatc ctgaccctgg ttgggttcgg cgccgcgatc
    13501 gcggcggggg cgtttgcgtg gcttgcgccg cgctacccgg accagctcgt gatctggacg
    13561 gtggtcgggg taaacctggt cttcctgagc gccatcctga gcctgtccat ttcggcgctg
    13621 ctgcgcggcc tcgagatcac catcggcaag tggcgccagg gagccgaagc gctgcaggcg
    13681 gagcgccgga gcctggagca cgcttacgcc acgctggagc gtgaaaccac ggagcgggcc
    13741 aacctcgagg cccagctgcg gcagtcgcag aaactcgaag cgctgggcac gctcgcaggc
    13801 gggatcgcgc atgacttcaa caacctgctg caaccgatca tggcgcaggc cgagatcgtg
    13861 caatcgggcc ttccccccga tcacgtcgac cggcagcggc tggaggacat cctgctctcc
    13921 gccgaacggg cccgcgacct ggtgcgccgt atcctgacct tcagccgccg ggcggaaccg
    13981 cggcggggcg cgcttcgcct ggcggaaccg gtccgggaag tggcggcgct gctgcggtcc
    14041 accttgccgg ccggcatcca catcgacgcc gtggtgcggg acgaagccgc cttcatccac
    14101 gccgagggga ccgaagtcat tcagatgctg atgaatctgg ccatgaactc gtaccacgcc
    14161 atgcggcgcg agggcggccg gctccagatc gtggtagagg acgccagcgt ggacgacctg
    14221 gtccgacttg cggtgcgaga caccgggacc gggatggacc gagcgacggt cgagcgcgcc
    14281 tttgatccgt tcttcactac caaggaaccg ggcgagggca ccggcttggg cctctccacc
    14341 gtccatggca tcgtcaccgc actggcgggg cgaatccggt tggtcagcga gcccggggca
    14401 ggtaccgagg tcgaaatgct ctttccccga gtccagggtc cgggcgccgt tgcgccgacg
    14461 accctgggga ggcgcccagc cagcgcacgg gtcctgctgg tcgacgacga ggcatcagtg
    14521 ctggccgtgg ccgggaccca gctgcgccat ctgggatatc acgtcgaggc ggtccagctt
    14581 cccgaggccg cgctcgatcg cattcgccgg gacccccagg cgttcgatgt gctgatcacc
    14641 gaccacggca tgccgggcat gagcggcctc gcgctggccc aggccagccg ggcggtcgct
    14701 cccgagctgc ccgtgattct gatgaccggg tatctggatg agccgacccg cagcgatgcc
    14761 ctggagggag ccgtcagcgc ggtactcccc aaaccgttcc ggctgggaaa tctcacggag
    14821 gtactcacga aggtgttggg aactaccgag tactgagtac tgagtctgtt aggcgtactc
    14881 atcgagctgg gaaaggccga tcagcacttc ccggccccgg gcaccttccg acggccccag
    14941 gatcccggcc tcgtgcaatt gatcgatgat gcgggcggcc cggccgtagc cgatcttgag
    15001 ccggcgctgc agcaacgagg tggagccgcc cagattctgg atgcagatct cggctgcctg
    15061 gcggaagagc gggtcgcgct ccccgggctc gaccggtccg ccctcgtcgt cgtccgcttc
    15121 ctgcagccgg atcacttcga gaatgtcggg ctccgccgcg gcggccgccg cggcggctgc
    15181 ccggcgcccg tcgaaccagc gcatcagctg ctcggtctcg tcggtggcga tgtaggcccc
    15241 ctgaatccgc tgcggctcgc tcttgccggg tggcaggaag agcatgtccc cgttgcctaa
    15301 caacgcttcg gcgccgttct gatcgagaat ggtccggctg tcgactttgg aggccacccg
    15361 gaacgccacc cggctcggga aattggcctt gatcagtccg gtgatgacgt tcaccgaggg
    15421 ccgctgggtg gcgaggatca ggtggatacc gatggcccgg gccttctggg ccagcagcgc
    15481 cagcggggtc tcgacctcgg cctgcaccgt catcatcaag tcggccagct catccacgat
    15541 gatgacgatg tagggcagca ggccttcggt gtagacggtg gtttccggcg gcgggggcgg
    15601 cgtgtcgggc gcttccgcgg cgaccgtggc cagggtccgg gcggccggga ccgggaggcg
    15661 gagctccttc ccctcgtgca ccttgtggtt gaagtcgccg acattcctgg caccattggc
    15721 gtggagcagc tcgtagcgcc gccccatctc ccacaccgcc cacttgagca cggtggccgc
    15781 gtcgcggctg tcggtcacca cccggtgccg catgtgcggc agggcgttgt acatcgacag
    15841 ctccaccatc ttggggtcga ccatcagaaa ccgcagctcc ttggcggtgt aacggtagac
    15901 cagtccggtg atgatggtgt tgatcgtcac cgatttcccg gagccggtgg cgccggcgat
    15961 cagcaggtga ggcgtcttgg ccagatcggt gatcaccggg cggccctcga gatccttgcc
    16021 cagcgcgacc ggcagcaccg agcgcgagcg gtcccattcg gatgaggcca ggagctcgcg
    16081 cagggtgacg atccgggcag tggggttcgg cacctcgacg ccgaccgccc ccttccccgg
    16141 aatgggcgcg acccgtacgc tgggggttcg catcttgatc gccagatcat cggacagcgc
    16201 cacaatccgc cccaccttca cgcccggcgc cggcaccact tcgaactggg tgaccaccgg
    16261 gccgctggtg cgccccgcga tgctgccgtc caccttgaag gtccggagcg cttccagcaa
    16321 cagctcaccc agccgatcga gctgggccgc atcggcggcg gtgtcctggg gcggcggcgg
    16381 cgtgagcaga tcgatgggcg gcagctgggc cgcgacctcc cggggcacga cccggggcgg
    16441 tggttccttc gccgacttgg gggtcttggc cctgcggggg ctgggcacga ccagccgcgg
    16501 tggcatggag ccgttgccct cctccacctc gggctcgtcg tccgccaggg tgaccaccgc
    16561 gctgccgcgc gggttggtgg gccgttcggt gcgttccagc cgttgcagcg ggtgccaagc
    16621 gatggtgccc agggtgagac cggtaagcgc cagaaatccc accagcatcc cgcccagctg
    16681 tcctaccacc ccggtgaccg cctgggccag gaacgcgggg gccacgccgc tcagacgggc
    16741 gccgatcgtc gcgggggtca ggaaggcctg ctcgtcgacc ccggtaatga cggcggtgag
    16801 aaacggcacc aggacactga gaccggtgac cagcacggca gcccgcttca tatcgagcag
    16861 cggcagccga tcgaagccgg cgaacccgac cg
//
LOCUS       DASWKS010000611         5444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2554635, whole genome shotgun sequence.
ACCESSION   DASWKS010000611 DASWKS010000000
VERSION     DASWKS010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2554635"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VGA78_17440"
     CDS             complement(<1..720)
                     /locus_tag="VGA78_17440"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX9895719.1"
                     /translation="MADAPTTLTTALAGRYRIDRELGQGGMATVYLALDLKHQRQVAV
                     KVLRPDLSLGSERFLREIATTAGLRHPHILPLYDSGEAAGFLFYVMPLVEGESLRDRL
                     KRDKQLPIEEALQIAREVSDALSYAHSRGVIHRDIKPENILLESGHAMVADFGIARAV
                     SAAGGESLTQTGMSVGTPAYMSPEQAVGDRDVDGRSDLYSLACVVYEMLAGQAPFTGP
                     TVESVVHQHMVADVRPVTQIRP"
     gene            complement(725..3697)
                     /locus_tag="VGA78_17445"
     CDS             complement(725..3697)
                     /locus_tag="VGA78_17445"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9895720.1"
                     /translation="MTTAARACPSCRTPLPEEALFCLHCGTATPTEPGVPPRTELTDA
                     SEIARVRKALAGRGYSVERILGEGGMATVYLATDLKHRRQVAVKVMRPDLAATLGAER
                     FLREVEIAAQLSHPNILPVHDSGDADGVLFYVMPYVEGESLHERIKRETQLPVQEALR
                     IAREVSEALAYAHGRKIVHRDIKPANIMLTAGHALVADFGIARAVGGATITQTGFSVG
                     TPHYMSPEQASGSATVDGRSDIYAVGCVLYEMLAGEPPFTGPTAQAIVLRSMTEAPRP
                     LTASREGLSPAIEAVVTRSLTKNPADRWQTAADFGKALGGAEDQLRLGPISGARTPAA
                     MPIVATGPSAAKVWGLFLGLGGLALVLVYGLVQRWGLPGWALGLAVLLFAIGALVLAV
                     TGKVETRRAAGGTVSGLAARFTWKNATLGGVTALGMWAVLATVLVFRGPAGATAPGSV
                     VRLAVLPFENRGAAEDNYFVDGVADQVRGKLMGLTGFQVTARTSSDQYKETKKTPQEI
                     GRELGVDYLLTSTVSWIKASGGTSRVQVVAELINVKTGAGTWQQSFDADLTDIFQVQG
                     SIATQVAGALNVALAPQEKQELEERPTKNLAAYDLYLKALAVQGNDPASLRQSIAHYE
                     QAVALDSTFAEAWARLGRVLSNLYFNSTPNPEVAARALRAVDRATTLAPDAIFTHSAR
                     SLYLSNVKNDQEGARSEVMAAMRLAPNDAEVLRMAAGMESSRGRWPEALAHAEQAVQV
                     DPRSVGGKANLFGYLVSTRKYPQALALGREILAETPGNLGAQENMAFIHLMQGDLAGA
                     RGVIRAVPAEVPRTAVATYFALYQDLYWVLEDADQQLVLRLPPSMFDDDRAIWATTQM
                     QLATLRGDRSLARALADTAEAEFARQIQATPNDPQRHIFRGLALATLGRKDEAIAEAT
                     LGASFNPLSRDQNTGAYYQHQLIRVYLLVGENEKALDLLEELVKIPYVLTPGYLRIDP
                     NFAPLKGNPRFEKLLQGE"
     gene            complement(3700..4158)
                     /locus_tag="VGA78_17450"
     CDS             complement(3700..4158)
                     /locus_tag="VGA78_17450"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9895721.1"
                     /translation="MQKTLFAVAAALLLHAPAAVAQKTEVMAVVRQFIDGFNKGDVAS
                     ALVTCADQTSIIDEFPPYEWHGSGSCAKWAEDFDAYAKKSGMTGPVVTLTTPKHVNVE
                     GDRAYVVVPSSFEFTQNGKPVKQTGATLTAALQKTAAGWRITGWSWSTGS"
     gene            complement(4177..5253)
                     /locus_tag="VGA78_17455"
     CDS             complement(4177..5253)
                     /locus_tag="VGA78_17455"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9895722.1"
                     /translation="MRSELTGMTVVAAALLAGCAPATGEKAISDAGTLASWTWDSTLV
                     FPGDGSLSRPEDGIALPDGRLIVSDQLHGLRQIEIDGTNMPFGNLAAVGYSHHPPAHN
                     GGANGISLEPGGTHLLLADVFGAAIYRVDVTSGIGEKVYQHRYGINAAVRDSKGAIWF
                     TQSAHNTPETGEPRLWAAVDIQRPEGALYRLGSTDGRLNPEAQLIVDSLLFANGLAID
                     ESNGQLYLSEMMAGRVWRYRVDLDAGTVHDGSVWVDSVAADNLELDGRGNLWLALPLT
                     NEILVVNPTTGARHTAFRSMTPAQQAVVDEFMRRGQAGTSRMELFTPAVWAPLPGPIT
                     GLIMGPDGPVYLTGLGNALLKLNR"
     gene            complement(5265..>5444)
                     /locus_tag="VGA78_17460"
     CDS             complement(5265..>5444)
                     /locus_tag="VGA78_17460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895723.1"
                     /translation="PMEGHEPLMPPGFHHYDLHVWLWKNNPEGVFSPTNPAIRCPTKG
                     YSFAESAPKMVHPHK"
BASE COUNT          838 a         1891 c         1786 g          929 t
ORIGIN      
        1 cgggcggatc tgggtgacgg gacggacatc agccaccatg tgctgatgca ccacgctctc
       61 gaccgtggga ccggtgaagg gtgcctgccc ggccagcatc tcgtacacga cacaggccag
      121 cgagtacagg tcgctccggc cgtccacgtc gcggtccccc accgcctgct ccgggctcat
      181 atacgccggc gtcccgaccg acatgcccgt ctgggtcagt gattcgcccc cggccgcgct
      241 gacggcccgg gcgatgccga agtccgccac catggcgtgg cccgactcga gcaggatgtt
      301 ctcgggcttg atgtcgcgat gaatcacgcc ccggctgtgg gcgtagctca gggcgtccga
      361 cacctcgcgg gcgatctgga gcgcctcctc gatcggaagc tgcttgtccc gtttcagccg
      421 gtcgcgaagc gactcgcctt ccaccagcgg catgacatag aacaggaagc cggcggcttc
      481 tcccgaatcg tacagaggca ggatgtgggg atgacggagg cccgccgtgg tggcgatctc
      541 gcgcaggaat cgctcgctgc ccaacgagag atcgggccgc aggaccttca ccgccacctg
      601 gcgctggtgc ttgaggtcca gggcgagata caccgtcgcc atgccgccct ggcccagctc
      661 ccgatcgatc cggtaacggc ccgcgagggc cgttgtcagt gtcgtggggg cgtcggccaa
      721 gggcctactc tccctggagc agcttctcga accgcggatt ccccttgagc ggcgcgaagt
      781 tgggatcgat ccggaggtac cccggcgtca gcacgtaggg gatcttgacc agctcttcca
      841 gcaagtcgag cgccttctcg ttctccccca ccaggagata gactcgaatc agctggtgct
      901 ggtagtacgc gccggtgttc tgatcccggc tgagcgggtt gaagctggcc ccgagggtcg
      961 cctccgcgat cgcctcgtcc ttccggccca atgtggccag ggccagcccc cggaagatgt
     1021 gccgctgggg atcgttcggc gttgcctgga tctgtctggc aaactctgcc tccgccgtgt
     1081 ccgcgagcgc ccgggccagc gaccggtcgc ctcggagcgt ggcgagctgc atctgagtcg
     1141 tggcccagat ggcccggtcg tcgtcgaaca tggacggagg aagccggagc accagctgct
     1201 ggtccgcgtc ctccagcacc caatacagat cctggtagag cgcgaaatag gtcgcgaccg
     1261 cggtgcgcgg cacctcggcc ggcactgccc ggatcactcc acgcgccccg gccagatcac
     1321 cctgcatcaa gtggatgaag gccatgttct cctgcgcgcc gagattcccg ggtgtctccg
     1381 cgagaatctc ccgacccagc gcgagcgcct gcggatactt ccgcgtgctg accaggtagc
     1441 cgaacagatt cgccttccca cccaccgaac gcgggtcgac ctgcacggcc tgctcggcgt
     1501 gggccagcgc ttccggccag cgcccacgcg acgattccat gcccgcggcc atccgcagga
     1561 cttctgcgtc gttgggagcg agccgcatcg ccgccatgac ttccgagcgg gcgccttcct
     1621 ggtcgttctt cacgttgctc aggtacagcg accgcgccga gtgggtgaag atcgcgtccg
     1681 gcgccagcgt cgtggcgcgg tctaccgctc ggagggcacg ggccgccacc tccgggttcg
     1741 gcgtgctgtt gaagtagagg ttcgacagca cacgaccgag gcgggcccag gcctccgcga
     1801 aggtggagtc gagcgccacc gcctgctcat agtgtgcaat cgattgacgg aggctggccg
     1861 ggtcgttccc ctgaactgcc aatgccttga ggtagaggtc atacgcggca aggttcttgg
     1921 taggccgctc ttccagctcc tgcttttcct ggggggcgag cgccacgttg agcgcaccgg
     1981 ccacctgggt ggcgatgctg ccttgcacct ggaagatgtc ggtgagatcg gcatcgaagc
     2041 tctgctgcca ggtccccgcc ccggtcttca cgttgatgag ctccgcgacc acctgaactc
     2101 ggctggtgcc gccggacgcc ttgatccacg agaccgtcga ggtgagcagg tagtccaccc
     2161 ccagctcccg gccgatctcc tggggcgtct tcttcgtctc cttatactgg tcggagctgg
     2221 ttcgcgcggt gacctggaat ccggtcaggc ccatcaactt cccccgcacc tgatcggcca
     2281 cgccatccac gaagtagttg tcctcggccg cgccgcggtt ctcgaacggc agcaccgcaa
     2341 gtcgcaccac cgaccccggc gcggtcgcgc cggccggccc gcggaacacc agcaccgtcg
     2401 ccagcacggc ccacatgcct aacgcggtga cgccgcccag tgtcgcgttc ttccaggtaa
     2461 accgggcggc cagcccgctg acggtgccac ccgcggcccg tcgggtctcc actttccccg
     2521 tcacggccag caccagggcg ccgatggcga acagcagcac cgccaggccg agggcccagc
     2581 cgggaaggcc ccagcgctgg accagaccgt agaccaggac cagcgccagc ccgccgagcc
     2641 ctaagaacag tccccacacc ttggcggcgc tcggccccgt cgcgacgatc ggcatggccg
     2701 ccggcgtccg ggccccggaa atcggcccga gccggagctg gtcttccgca ccgcctagcg
     2761 ccttgccgaa gtccgccgcg gtctgccatc ggtcggccgg gtttttggtc agcgagcggg
     2821 tcaccaccgc ctcgatggcc ggcgagagcc cttcccgcga ggcggtgagt ggacgaggcg
     2881 cctcggtcat gctccgcaac acgatggcct gggcggtagg cccggtgaat ggcggctcac
     2941 cggccagcat ctcgtagagc acgcaaccta ccgcgtagat gtcgcttctc ccgtcgaccg
     3001 tggcagaccc actggcctgt tccgggctca tgtagtgcgg ggttcccacg gagaaaccgg
     3061 tctgggtgat cgtcgcgccg cccactgctc gcgcgatccc gaagtccgct accagggcgt
     3121 ggccggccgt gagcatgatg ttggccggct tgatgtcgcg atggacgatc ttccggccgt
     3181 gggcgtaggc cagtgcctcg cttacttctc gcgcgatccg gagcgcctct tgcaccggca
     3241 gctgagtctc ccgcttgatg cgctcatgca gcgactcgcc ctccacgtac ggcatcacat
     3301 agaagagcac gccgtccgcg tcgcccgagt cgtgcaccgg caggatgttc gggtggctca
     3361 actgcgccgc gatctccact tcccgcagaa accgctccgc acccagcgtc gcggccagat
     3421 cggggcgcat taccttgacc gcgacctggc ggcggtgctt caggtcggtg gccaggtaca
     3481 ccgtggccat gccgccctcg cccagaatcc gctccaccga ataaccccgg ccggccagcg
     3541 ccttccgcac ccgggcgatt tcgctggcgt cggtgagttc ggtccggggc ggcacgcccg
     3601 gctcggtggg agtagccgtc ccgcagtgga gacagaagag cgcttcctcg ggcagcggcg
     3661 tccggcacga cggacaggcg cgggcggcgg tggtcatgct cagctaccgg tggaccagga
     3721 ccagccggtg atccgccacc cggcggcggt cttctgcagc gcagccgtga gggtcgcgcc
     3781 ggtctgcttc accggcttgc cgttctgggt gaactcgaaa ctggagggaa ccacgacgta
     3841 ggcccgatcc ccctcgacgt tgacgtgctt gggggtcgtc agggtgacga ctggccccgt
     3901 catcccgctc tttttggcgt aggcgtcgaa gtcctcggcc catttggcac aggagccgga
     3961 tccgtgccac tcgtagggcg ggaactcgtc gatgatcgag gtctgatcgg cgcaggtcac
     4021 gagggcagat gccacgtccc ctttgttgaa gccatcgatg aattggcgca ccacggccat
     4081 cacctcggtc ttttgcgcca ccgcggcggg cgcgtggagc aggagtgctg ctgcgacggc
     4141 gaacaaggtc ttctgcatgt ccattcctgg tgagagtcag cgattgagtt tcagtaaggc
     4201 gttgcccagt ccggtgagat agaccggacc atcgggtccc atgatcaatc ccgtgatcgg
     4261 tcccggcagg ggggcccaga cggccggggt gaacagctcc atgcgcgacg taccggcctg
     4321 cccccggcgc atgaactcgt cgaccacggc ctgctgcgcc ggcgtcatcg agcggaacgc
     4381 agtgtggcgg gcaccggtgg tcgggttgac caccaggatt tcgttggtga ggggcagcgc
     4441 cagccagagg ttgccccgcc catccagctc caggttgtcc gccgccacac tgtccaccca
     4501 caccgagccg tcgtgcaccg ttcctgcgtc caggtccacc cgatagcgcc acacccggcc
     4561 ggccatcatt tcggacaggt agagctggcc gttgctctcg tcgattgcca ggccgttggc
     4621 gaagagcagt gagtcgacga tgagctgcgc ctcggggttc agccggccgt cagtgctccc
     4681 cagccgatag agagcccctt cgggtcgctg aatgtcgacc gccgcccaga gacgtggctc
     4741 gccggtttcc ggcgtattgt gggcgctctg ggtgaaccag atcgccccct ttgaatcgcg
     4801 caccgcggca ttgatcccat agcggtgctg atagaccttc tctcctatcc cgctcgtcac
     4861 gtcgacccgg tagatggcgg caccgaagac gtcggccaga agcaggtggg taccaccggg
     4921 ttcgaggctg attccgttgg cgccaccgtt atgcgccggc ggatggtgac tgtacccgac
     4981 cgcggccaga ttcccgaacg gcatattggt gccgtcgatc tcgatctggc gcagcccgtg
     5041 gagctgatcg ctcacgatga gccggccgtc gggaagcgcg atcccgtcct cggggcggct
     5101 gagcgaccca tcgccgggga agaccagcgt ggagtcccag gtccagctcg ctagcgtccc
     5161 cgcgtcggag atcgccttct cgccggtggc aggagcgcat ccggccagca gcgcagccgc
     5221 cacaacggtc atccctgtca gctcactcct cacggggtct cctcctactt gtgcgggtgc
     5281 accatcttcg gggcggactc cgcgaacgag taccccttgg tcggacaccg gatcgccggg
     5341 ttggtcgggg agaagacccc ttccgggttg ttcttccaga gccagacgtg caggtcgtaa
     5401 tggtggaatc cgggcggcat cagcggctca tgaccctcca tcgg
//
LOCUS       DASWKS010000612         1517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1447293, whole genome shotgun sequence.
ACCESSION   DASWKS010000612 DASWKS010000000
VERSION     DASWKS010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447293"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /gene="ispG"
                     /locus_tag="VGA78_17465"
                     /gene_synonym="gcpE"
     CDS             complement(<1..985)
                     /gene="ispG"
                     /locus_tag="VGA78_17465"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEX9895724.1"
                     /translation="MPIGSCHPVVVQSMTNTDTADVAATVRQVAELALAGSELVRVTV
                     NTDEAAGAVPAIVEGLDRAGVRVPIVGDFHYNGHLLLTRHPDCAAALAKYRVNPGNVG
                     ARRADQHFRTIIQQALLYGKPIRIGVNWGSLDQQLLTQMMDANARLPEPREARDVTMD
                     AMVESAIRSAAFAESEGLPHDHIVLSAKVSGVQDLLDVYRMLAARCDYPLHLGLTEAG
                     MGMKGIVASSAALALLLQEGIGDTIRVSLTPAPGGDRSEEVRVGQQILQSLGLRSFLP
                     QVTSCPGCGRTTSTFFQEMAHDIQEYLRARIPEWRERHPGVAELRVAVMGCV"
     gene            complement(1078..1338)
                     /locus_tag="VGA78_17470"
     CDS             complement(1078..1338)
                     /locus_tag="VGA78_17470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895725.1"
                     /translation="MKDASLTPIKPERVAEELRKICNQRDSGQLDRDEYEHRFARMIS
                     ELRDRKIDGTRAEIMAALSPLRAEGKVDAIAWDRLTKSLGLA"
BASE COUNT          246 a          515 c          482 g          274 t
ORIGIN      
        1 ccacgcatcc catcaccgcc actcgcagct ccgcgacacc gggatggcgt tcccgccact
       61 cgggtatgcg agcccgcagg tattcctgga tgtcgtgtgc catctcctgg aagaaggtgc
      121 tggtggtgcg gccacagccg gggcagctgg tcacctgggg cagaaagctg cggaggccga
      181 gcgactgcag gatctgctgc ccgacccgga cctcctcgct gcgatcaccc ccgggcgccg
      241 gggtgagcga caccctgatg gtgtccccga ttccctcctg cagcagcagc gccagcgcgg
      301 cactcgatgc cacgatcccc ttcattccca tcccggcctc ggtcagtccc agatgcagag
      361 ggtagtcgca tcgggcggcc agcatccggt agacgtccag tagatcctgg accccggaca
      421 ccttggcgga cagcacgata tgatcgtgag gcagcccctc cgactcggcg aaggcggcgg
      481 atcggatggc gctctcgacc atggcgtcca tggtcacgtc gcgcgcctcg cgcggctccg
      541 gcagccgggc gttggcgtcc atcatctggg tcagcagctg ctgatccagc gaaccccagt
      601 tgaccccgat ccggatcggc ttgccgtaga ggagtgcctg ctggatgatg gtgcgaaaat
      661 gttggtcggc ccggcgggcc ccgacgttcc cgggattgac ccggtatttc gccagcgcgg
      721 ccgcgcaatc gggatgccgg gtgagcagca ggtgtccgtt atagtgaaaa tcgcccacga
      781 tcggcacccg gacgccggcg cggtccagtc cctcgacgat ggcgggcaca gcgcccgcgg
      841 cctcatcggt gtttaccgtc acccgcacca gctcgctacc cgccagggcc agctcggcta
      901 cctgtctgac ggtcgccgct acgtcagccg tgtcggtatt ggtcatggac tggaccacca
      961 ccggatggca ggatccgatg ggcactgtcc cgacccaaac ggtcggtgtg gttcgccgtg
     1021 ggaggaggct caagcgatca tccgtcggta catcagaccc tcagtccgtc caaccggtca
     1081 cgccaggccc agtgacttgg tcagccggtc ccacgcgatc gcgtccacct tgccttcggc
     1141 ccgaagcggc gacagcgcgg ccatgatctc ggcccgggtc ccgtcgatct tgcggtcgcg
     1201 cagctccgag atcatccggg caaagcgatg ttcgtattca tcccgatcca gctgaccgga
     1261 atcccgctga ttgcagatct tgcgcagctc ttcggccaca cgctcgggct tgatcggagt
     1321 gagggaagcg tctttcactg gggtcctcga actgggctcg gggtgaaaag tttctgagac
     1381 cgtcgcgaaa gatgccacta cccctgtgcg gtaggtagtg gctagcattg gtacgtctcc
     1441 tgctgaatac tcgtgcatga aacgcctact gacggtgctc gccgccctag ccgtgccttg
     1501 tcctgcgctc gcgcagg
//
LOCUS       DASWKS010000613        10157 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1090521, whole genome shotgun sequence.
ACCESSION   DASWKS010000613 DASWKS010000000
VERSION     DASWKS010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10157
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1090521"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..924
                     /locus_tag="VGA78_17475"
     CDS             <1..924
                     /locus_tag="VGA78_17475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9895726.1"
                     /translation="EAALAGLVGCESALSFTSCWNANEALPGTVLGEEDLVLSDQLNH
                     ASIIDAIRLAKAIVKCQTGVYQHGNLKELDERLAAARDRRTKLVISDGVFSMEGAICD
                     LPGLLEVCRRHGAILMLDDSHATGVLGERGRGTAEHFGLVGEVDLITSTLGKALGGAA
                     GGFAAGSAEITDYLTQRSRPQLFSNALPCTVAASALAAVQYLEAHPERVRNLRDNTGY
                     FRENLLQLGFKPLPGHTPIIPVILGETAAAIQMSELLLTEGVFVTGFGYPVVPKGQAR
                     VRCQISATHSRDDLDEALAAFKKVGTRLGLI"
     gene            938..1795
                     /locus_tag="VGA78_17480"
     CDS             938..1795
                     /locus_tag="VGA78_17480"
                     /inference="COORDINATES: protein motif:HMM:NF016145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HEX9895727.1"
                     /translation="MQLYYYRDAKGNFGDDLNAWLWPRLLTGVMDSRPDALFLGIGTL
                     LNTRVPPDPMKHVLGSGVGYGTVPQIDATWDVRFLRGPLTCDALGLPRHLAITDPAAL
                     VSLFVQRSAPNGVAIMPHHLSVPFLDWPRVCALGGFRFINPAGGVEEVLNEIAGSQIV
                     IAEAMHGAIVADALRIPWIPMQIYPQFLPFKWHDWMESLGIVADISCVVPEYDGSERS
                     MPRRLAARLLGRLDFPARAHRRMVDRLAALAQREPVLSDTNRFETAVQRMREAVERFR
                     RDLGGREAA"
     gene            1792..2988
                     /locus_tag="VGA78_17485"
     CDS             1792..2988
                     /locus_tag="VGA78_17485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895728.1"
                     /translation="MSFTPCLSLAEVYGPQVIYLIRSSWRQYDFLRRGDESIRDGFTG
                     VLLPIIGEGTPLCSAGTYRPDGLELLRVAGVAVPEQPILYRGAEDYAATLSTLVQSGT
                     TLAIQHVYPPDEIPAEAYWIPPTLLSDLNDKANLTRFVPPECCPPRRVVPIETATGLR
                     LGPGETLVIKGSTPRSTGAGGAVVMARTDQQLRSLPTRLAGCGQVVVEEYQPFVRTMC
                     VTWAATTEGDIHYVGSADQVVDEDGAFHGSWMGPSLGAPEAAVGLGRAIMTAAVELGY
                     VGFAGFDMGVLPDGAILVFDLNFRLCSSTPALLCLPLLEERHPEGYLARLANFRSQRP
                     YQEMCRSALEAVSRGILLPISSFDPALAGWPDRLPSLRGLVVGRDRAETEARCEAMRL
                     AGFEFS"
     gene            3251..3967
                     /locus_tag="VGA78_17490"
     CDS             3251..3967
                     /locus_tag="VGA78_17490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895729.1"
                     /translation="MRVFIAALSVIVTLVSVGSLEAQQLRPDSYRWYFGVQGGALLAQ
                     TQTQDYKTFPSAGAHLMVVGKRGGVMLSFEESFGDQEGSAFAFIYQQETEDIVDGQTV
                     TDTVDVFAIHQAGFDRVRKYSASLMAFPIRAQLEPYLGVGFGLMHTVGTRVESTIPTP
                     LEGFLADSVVRVRSSTGFGSFVGGLQYGAGGRVVVYGQYQITTSPAGGNLLTGPSHTF
                     LFGLRFGLGRAKEDIKGGGY"
     gene            4180..5364
                     /locus_tag="VGA78_17495"
     CDS             4180..5364
                     /locus_tag="VGA78_17495"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895730.1"
                     /translation="MINGGVYRPTELLRAAARQGWQVTAISQLAPAEPSDAGLELVRS
                     VPASVRLTHFEPPPARDPSHFFSPRLSGGFGNIEPIITAALRECAAHRPTAVMASGPP
                     FAEFVAALVLSREWDVPLVLDYRDEWTECPFQFVGVGNVDRYWEARCLSKAALVCFTT
                     ESQRAHQISAFPQLGPARTMVAPNGWEEHHSGSSPATVLTPGVATIAFLGLLAEHCDL
                     PEFLATLERVMTLTPATAQRIQFAFVGRKTTTEQQLLERFSRPALLRDIGHVPLSEAQ
                     AIMRTSDALLLFNVPRLARYIPGKAYDYIAAGRRILLYGQGGELERLLSEYPPAIRVE
                     RGDPQALASAMAKIAAAKVEPGTSDGSEFVARHRRSLSAERQLAAIERVARQNRSGHP
                     VA"
     gene            complement(5344..5973)
                     /locus_tag="VGA78_17500"
     CDS             complement(5344..5973)
                     /locus_tag="VGA78_17500"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEX9895731.1"
                     /translation="MRDPRVLPITFFHRPAPVVARDLLGAVMISYLAGETVAGHIVET
                     EAYLGYDDPASHAWRGRRHRGNEGIYSPPGSWYVYLSYGMHCCANLVCGPTGLGAAVL
                     VRGLVPLEGVEIMRRRRAARKFRHPERLEGGPGRDAALTDGPGKLSQALGITRELDRQ
                     PMPASPVVVVEGFGVTDDELRITPRIGITKAADLPLRFLLASRLRHRVA"
     gene            complement(5970..7547)
                     /locus_tag="VGA78_17505"
     CDS             complement(5970..7547)
                     /locus_tag="VGA78_17505"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX9895732.1"
                     /translation="MHLAPHAALLIDFDNVTLGIRSDLTKELRTLLNSDIIKGKVAVQ
                     RAYADWRRYPQYIVPLSESSIDLIFAPAFGTNKKNATDIRLAVDAIELVFTRQEIGTF
                     ILLSGDSDFSSLVIKLKEYGKYVIGVGIRESASDLLIQNCDEYYSYSDLAGLTKEADT
                     PSLQRDPWELVVESVEKMARDSDVMRSDRLKQVMQQVDPNFDEKNAGFNRFSKFVTEA
                     GNRGLIRVTKLDNGQFEVAPVAAAAAALPAPAPRREAPTAPESEENGRRGRRGRGRGR
                     GRDRSERSEPRPETPALAARADGPLTLAESFDLMQRALGELRAPVDHDRLRARMVALL
                     GREDELLEPSRFARLLRQANDAEVADVRRAGVDGYEVSPHRLQRMAQAAVAAAANPPA
                     RRERTEPPAGAEATAETPIAVAEHPPAESPAADPARRPPTLRFRRGSRGPVRSVDVPL
                     VGVVKFEPEIPVEKPKARKPRSETAPPRARKPRGDRAASPKAESSAVSGAVAPAAKPA
                     GRPRRRSRAKAKEPKPE"
     gene            complement(7715..8572)
                     /locus_tag="VGA78_17510"
     CDS             complement(7715..8572)
                     /locus_tag="VGA78_17510"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX9895733.1"
                     /translation="MTRRTLLGRGLAGTGLALLLHGGYYAVQWYREDRIIDGRMLTQV
                     TSVPPEQRLEHSLRVAFNIPPHKSPAPAPDYRLANPLLKVLGPPASRIYESGGHCGRR
                     ARLLIVLLGKQGIPARKIHLVNQNYARFGHASEYVHAVVEAKVQDRWIVLDPLYNIIY
                     RRRDGSYATLEEIRADSQVFQRGLASADTTFSPYYPTLYTFGDYRKFLWSSIPGGRSV
                     YDLVAGAIGPDRAREIPTPLMLETPYPTLVLISLSGALVALAGWVFLVVGPIRRRAPA
                     PLPFPARTS"
     gene            complement(8655..>10157)
                     /locus_tag="VGA78_17515"
     CDS             complement(8655..>10157)
                     /locus_tag="VGA78_17515"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HEX9895734.1"
                     /translation="YSPGTGLKVGGDIMGMYPLYYWREDAVTLVGSSAALFPRHPAFR
                     FELDRAGLAGVLTTNGLVAHRSIYRDVRRMPGGVLLDVPTDGPTLERVQFRFPESDRY
                     YDLSFSQHIRILFETVADVMQRHVPPARETGLLLSGGLDSRTLAGFLARQGTPTVACT
                     MGWPGDYDARCAGLVARELRMENHLWPDQPAAAESFARVKSRWEHLSNGFHWEAPWQL
                     AGQLAETPSRVVAGFAFDMLLAPIVGAAQHLDSDLSSAFEGSFPRANGWGFPPEMVGR
                     LLGDSRLAAQVLEDLRSDFVSRSRLAGRAASQFVLGNRARYHLGGMVWPMSFGSWPVL
                     PVLDRALQGVIGGIPLASLIERRAQSELVRTHFPRLARIPLDRFSGRPFPLDPSLADQ
                     VRQGLSRRWERLMVALPRHRGPERRHHFRTADLNGPSWRAIRREAEKSRLAATDHIDR
                     ELLDHFLPGPDQEVRVANVIKDSAKLKLLLGFMLWVGNRGDQDSPTILDD"
BASE COUNT         1713 a         3352 c         3327 g         1765 t
ORIGIN      
        1 gaagccgcct tggccgggtt ggtcggctgt gagagcgcgc tctcgttcac ctcctgctgg
       61 aacgccaatg aagcgcttcc cggcacggtg ctgggcgagg aggacctggt cctctccgat
      121 cagctgaatc acgcgtcgat catcgatgcg atccgactcg ccaaggccat cgtcaagtgt
      181 cagaccgggg tgtaccagca cggtaatctg aaagaactgg atgagcgcct ggccgcggcc
      241 cgggatcgcc ggaccaaatt ggtcatcagc gacggcgtct tctcgatgga aggcgccatc
      301 tgtgacttgc cggggctgct ggaggtgtgc cgccggcacg gcgcgattct gatgctcgac
      361 gactcgcacg cgaccggcgt gctgggcgag cggggacgcg gcaccgccga gcacttcgga
      421 ctggtcggtg aagtcgacct gatcacctcc accctgggca aggcgctggg cggcgccgcc
      481 ggcggtttcg ccgccgggtc ggccgaaatc accgactacc tcactcaacg atcccggccc
      541 cagctgttca gcaatgccct cccctgcacc gttgcggcga gcgccctcgc cgcggtacag
      601 tatctcgagg cgcaccccga gcgggtccgc aacttgcgag acaacaccgg ctactttcgc
      661 gagaacttgc tgcagctcgg cttcaagccg ttaccgggtc acacccccat catccccgtc
      721 attctgggcg agaccgcggc ggcgatccag atgagcgagc tgctgctgac cgagggggtg
      781 tttgtgaccg gattcggcta cccggtggtg cccaagggac aagcgcgggt gcggtgtcag
      841 atctcggcca cccattcgcg ggacgacctg gatgaagcct tggcggcctt caaaaaggtc
      901 ggcacccggc tcggattgat ctagccaccg gacctcgatg cagctctact actatcgcga
      961 cgccaaggga aacttcgggg atgacctgaa cgcctggctt tggccccggc tgctcaccgg
     1021 ggtcatggat tcccgtcccg acgcgctgtt ccttggcatc ggcaccctgc tcaacaccag
     1081 ggttccgccc gacccgatga agcatgtcct cggctcgggt gtgggatacg gcacggtccc
     1141 ccaaatcgat gccacctggg acgtgcgttt cctccgaggc cctctcacct gcgacgcgtt
     1201 gggccttccc agacacctgg cgatcaccga tccggccgcg ctggtctcgc tcttcgtgca
     1261 gcgctccgct cccaacggcg tggccatcat gccacatcac ctcagcgttc ccttcctcga
     1321 ttggccgcgg gtttgtgccc tgggcgggtt ccgattcatc aatccggcgg gcggcgtcga
     1381 agaagttctg aacgaaattg ccggctccca gatcgtgatc gcggaagcca tgcacggcgc
     1441 tatcgtcgcg gatgcactcc ggataccatg gatcccgatg cagatttacc cccagtttct
     1501 gccgttcaag tggcatgact ggatggaatc cctcggcatc gtggccgaca tcagttgcgt
     1561 agtgcctgaa tacgacggat cggagcgttc gatgccccgc cgcctggccg cccgactcct
     1621 gggtcggctg gatttccccg cgcgggccca tcgccgcatg gtcgaccggc tggcggcgtt
     1681 ggctcagcgg gaaccggtgt tgagcgacac caaccggttc gagaccgcgg tgcagcgcat
     1741 gcgcgaggcc gtcgaacgat tccggcgtga cctgggcggc cgcgaagccg catgagtttc
     1801 acgccctgcc tctcgctcgc cgaggtgtac gggccccagg tgatctacct cattcggtcg
     1861 tcgtggcgcc agtacgattt cctccggcgc ggcgatgagt ccattcgcga tggctttacc
     1921 ggggtgctgt tgccgatcat cggcgagggc accccgctct gctccgccgg tacctatcgg
     1981 cccgacggac tcgaactgct ccgggtcgca ggcgtcgccg tcccggagca gccgattctc
     2041 taccgcggcg ccgaagacta cgccgcgacc ttgagcacgc tggtgcagtc gggcaccacg
     2101 ctcgcaattc agcacgtgta cccacccgac gagattccag ctgaagcgta ctggatcccc
     2161 ccgacactct tgtcggacct caacgacaaa gccaatctca cccggtttgt tccgccggag
     2221 tgctgtccgc cccgccgggt cgtgccgatc gagaccgcca cgggcctccg gttggggccg
     2281 ggggagacgc tggtgatcaa gggctccacc ccgcgttcca ccggcgcggg aggggcggtg
     2341 gtgatggccc gaacggacca gcaacttcgt tcgctgccca cgcgtctggc cggatgcggc
     2401 caggtcgtgg tggaggagta ccagcctttc gttcgcacca tgtgcgttac ctgggccgcc
     2461 accaccgagg gcgacatcca ttacgtgggg tcggccgacc aggtggtcga tgaggatggg
     2521 gctttccacg gcagctggat gggcccgtcg ttaggcgcgc cggaggcggc ggtcgggctc
     2581 ggacgcgcga tcatgaccgc ggcggtcgag ctgggctacg tcgggttcgc cgggttcgac
     2641 atgggcgtcc tccccgatgg ggcaatcctg gtcttcgatc tcaacttccg gctctgctcc
     2701 agcacgccgg ctctgctttg ccttccgctg ctcgaggagc ggcatcccga gggatacctg
     2761 gcccgactgg ccaacttccg cagccagcgc ccctaccagg agatgtgccg atccgctctc
     2821 gaggcggttt cgcggggaat actgctcccg atctcctcgt tcgacccggc cctggccggc
     2881 tggcccgatc ggttgccttc cttgcgggga ttggtggtgg gtcgggatcg tgcggaaacc
     2941 gaggcacgct gcgaggccat gaggctggct ggcttcgagt tcagctaaag tgggctctcg
     3001 cgtttcgcca tgaagtgtcc tattatggga cgggatccgt cgccagatgg tgtgtcggga
     3061 caggcatttg gttgctactc agcgtccaag tgtcgcagat ttggacgagt tagccagcca
     3121 ggctttcgca ggacctcgac gagcacaagc tttgccgtag tgtgaccccc gacgccgggt
     3181 ccggcgtcca gcacgcaacg caacctgaag cccgacaacg aagtttggca gctcgctcgg
     3241 aggcaaactc atgcgcgtgt ttatcgcggc cctgtccgtc atcgtcaccc tggtcagcgt
     3301 ggggtcgctc gaggcccaac agcttcgccc cgattcctat cgctggtatt tcggggtcca
     3361 ggggggagcc ctgctggccc agacccagac ccaggactac aagaccttcc cgagcgcggg
     3421 cgcgcacctc atggtggtgg ggaagcgggg cggggtcatg ctctccttcg aagagtcctt
     3481 cggcgaccag gaggggtccg ctttcgcctt catttatcag caggagaccg aagacatcgt
     3541 agacggccag accgtgacgg atacggtcga cgtcttcgcc atccatcagg cgggtttcga
     3601 tcgggtgcgc aagtattccg cgtctctgat ggccttcccg attcgcgccc agttggagcc
     3661 ctatctcggg gtcgggttcg gcctgatgca cacggtaggc actagggtcg agagcaccat
     3721 tccgacaccg ctggaaggat tcctggcgga ttcagtggtc cgggtgcgca gctccactgg
     3781 attcggctcg ttcgtgggcg ggttgcagta cggcgcgggt ggccgagtgg tggtctacgg
     3841 ccaataccag atcaccacgt cgcccgcggg cggcaacctg cttaccggac ccagtcatac
     3901 tttcctgttc gggctccggt ttgggctggg acgggccaag gaagacatca agggcggcgg
     3961 ctactagcct gagaacgccg acgcgccaat tcttcatgca tggtattggc tcgtgtgggc
     4021 gtcagccgtc tggccggaat agcgcgcgat acatttcgga cctggcagca aaccgcatca
     4081 ctgattgcta gcacacgggg ctctcattcc agggaagcgc atcgtccctc ggcgaatgag
     4141 agccctcatt tacttctgct ggcccgtttc cttccaccgg tgatcaacgg cggcgtctac
     4201 cgtcccaccg agctcttgcg ggccgcggcc aggcaaggct ggcaggtcac agccatcagc
     4261 cagctcgctc cggctgagcc atcagacgcc ggtctggagc tggtccggag cgttcctgct
     4321 tcggtgcggc tgacccactt cgagccaccc ccggcgaggg atcccagtca ttttttctcg
     4381 ccccgcctga gcggtggctt cgggaacatc gaaccgatca tcacggcggc actgcgggaa
     4441 tgcgccgccc atcggccgac ggcggtgatg gcctccgggc cacccttcgc cgagtttgtt
     4501 gccgcgctgg tcttgagccg ggaatgggat gttccgctgg tgctggacta ccgcgacgag
     4561 tggaccgaat gtcccttcca gtttgtcggg gtaggcaacg tcgaccgcta ttgggaagcg
     4621 cgctgcctca gcaaggcggc gctggtgtgc ttcaccaccg aatcccagcg ggcccaccag
     4681 atcagcgctt ttccccagct cggaccagcc agaaccatgg tggcacccaa tggctgggag
     4741 gagcaccatt ctggatcgag cccggcaacg gtcttgaccc cgggggttgc cacgatcgca
     4801 ttcctggggc tgctggcgga gcattgtgac ctgcccgaat tcctggcgac gttggagcgg
     4861 gtgatgactc tgactccggc cacagcccag cggatccagt tcgcctttgt cggcagaaag
     4921 acgacaacgg aacagcagct cctggagcgc ttttcccgcc cggccctgct gcgagacatc
     4981 ggccacgtcc cgctctccga agcccaggcg atcatgcgga ccagcgacgc actgctcctg
     5041 ttcaatgtcc ctcgcctggc ccgatacatt ccgggaaagg cctacgacta catcgccgcc
     5101 gggcggcgta tcctgctgta tggacagggg ggcgagctgg aacgtctgct gtcggagtat
     5161 ccgccggcga ttcgggtcga gcggggcgat ccccaggcct tagcgtcggc gatggcgaag
     5221 atcgcggcgg cgaaggtcga gccggggact agcgacggct ccgaattcgt cgcgcgccac
     5281 cgccgctcct tgagtgctga acggcagctc gcggcgatcg aacgggtggc gcggcagaac
     5341 cgctcaggcc acccggtggc gtagccgaga tgcgagcaga aatcgcagcg gaaggtcggc
     5401 cgccttggtg atgccgatgc gcggggtgat gcgcaactcg tcgtccgtga ccccgaagcc
     5461 ttccacgacg actacgggcg acgccggcat cggctgacgg tccagctccc gggtgatccc
     5521 gagcgcctga ctgagtttgc ccggaccgtc tgtgagggct gcatcccgcc ccggccctcc
     5581 ttcgagtcgc tcaggatgac ggaacttgcg cgcggcccgg cggcggcgca tgatctcaac
     5641 gccttcgagc ggtaccagcc cccggacgag aaccgctgct cccaggcccg tgggtccaca
     5701 caccaggttg gcgcagcagt gcattccata ggacaggtag acgtaccagc ttcccggtgg
     5761 cgagtagata ccctcgttgc cgcgatggcg ccggccgcgc caggcatggg acgcgggatc
     5821 gtcatagccg agatacgcct cggtctccac gatgtgtccc gccactgtct cccccgcgag
     5881 gtatgaaatc atcaccgccc cgagcaggtc gcgtgcgacc accggggcgg gacgatgaaa
     5941 gaaggtgatc ggaagtactc gcgggtccct cactccggct tgggctcctt ggccttggcg
     6001 cggctgcggc gccggggccg cccggctggc ttggccgccg gggccaccgc accggaaacg
     6061 gctgacgact cggccttggg agaagcggcc cggtctccgc ggggctttcg ggcccggggc
     6121 ggagcggtct cgctgcgagg cttccgcgcc ttaggcttct cgaccgggat ttccggctcg
     6181 aatttgacga cgccgaccag aggcacgtcg accgaccgca ccgggccccg gctgccgcgc
     6241 cggaagcgga gggttggcgg acgtcgcgcc ggatcggccg ccggtgattc ggccggcggg
     6301 tgctccgcca ctgcgatcgg cgtttccgcg gtggcttccg ccccagccgg cggctcggtc
     6361 cgctcccgtc gtgccggtgg attcgcggcg gcggctaccg cggcctgagc catacgctgc
     6421 aaccgatgag gcgacacttc gtagccatcg actccggccc gccgcacgtc ggccacttca
     6481 gcgtcgttgg cctgccgcag cagccgggca aagcgggatg gttcaagtag ctcgtcctcg
     6541 cgacccagca atgccaccat gcgggcccga aggcggtcgt ggtccacggg ggcccgaagc
     6601 tcacccaggg ctcgctgcat gaggtcgaag gactctgcca gcgtgagcgg accatcggcc
     6661 cgggccgcca gcgcgggggt ttccggtcgc ggctcggacc gctcgctccg gtcccgcccc
     6721 cggccccggc cccgcccccg ccggccgcgg cgtccattct cttccgactc gggcgccgtg
     6781 ggggcttcac gccggggagc gggagccggc aaggcggcag cggccgcggc gaccggggcc
     6841 acctcgaatt gtccgttgtc gagcttggtc actcggatga gcccgcggtt ccccgcctcg
     6901 gtgacgaact tgctgaaccg gttgaacccc gcgttcttct cgtcgaagtt gggatcgacc
     6961 tgctgcatca cctgcttgag gcgatcggag cgcatgacgt cgctgtcgcg cgccatcttc
     7021 tccaccgatt ccacgaccag ctcccacgga tcgcgctgga gggacggggt atccgcctcc
     7081 ttggtgagtc cggccaggtc gctgtaggag tagtactcgt cacaattctg gatcagcagg
     7141 tcgctggcgg attcgcggat cccgaccccg atgacgtact tcccgtattc cttgagcttg
     7201 atgaccagcg agctgaaatc gctgtcaccc gacaacagga tgaaggtccc gatctcctgc
     7261 cgggtgaaca ccagctcgat cgcgtccacc gccagccgga tgtcggtcgc gttcttcttg
     7321 ttggtgccga atgccggggc gaagatcaga tcgatggacg actcggacaa cgggacgatg
     7381 tactgcgggt agcggcgcca gtccgcgtag gcccgctgga ccgccacctt gcccttgatg
     7441 atgtcgctgt tcagcagggt ccgaagctct ttggtcaggt cggagcggat gccgagagtg
     7501 acgttgtcga agtcgatgag gagcgccgcg tggggcgcga gatgcactgc aggtaccgca
     7561 gcggccggac ggccggaccg cggaccggtc ggatgggagg tcactcgctg ttctccaggc
     7621 tggcgatggg cacaagcccg gacgctgcgt caggcacgcc aaggaaggcc acgaccgcca
     7681 gccaaaacga aggtcgtcta tgcaacgctt gaagttagga ggttcgggcc gggaacggaa
     7741 gcggggcggg agcgcgccgc cggatcggac cgacaaccag aaacacccag ccagccaagg
     7801 cgaccaacgc gcctgacagc gaaatcagga ccagcgtggg ataaggggtc tcgagcatca
     7861 agggagtagg gatctctcga gcgcgatcgg gcccgatcgc gcccgccacc agatcgtaga
     7921 ccgatcgtcc ccccggaatc gaggaccaga ggaacttccg gtagtctccg aaggtgtaga
     7981 gcgtcgggta gtaaggcgag aacgtggtat cggccgatgc caagcctcgt tggaagacct
     8041 gagaatcggc tcggatttct tccaaggtgg cgtagctgcc gtccctgcga cggtagatga
     8101 tgttgtagag cggatcgagt acgatccaac ggtcctgaac cttggcttcg accacggcat
     8161 gcacgtactc gctcgcatgc ccgaaacggg cgtagttctg attcaccagg tggatcttgc
     8221 gagcgggaat cccctgcttc cccaggagca cgatcagcaa ccgggcccgg cgaccgcagt
     8281 gcccaccgct ctcataaatg cggctggccg gcggccccaa caccttgagc agggggttcg
     8341 ccagcctgta atccggcgcc ggggccggtg acttgtgagg aggaatattg aaggccactc
     8401 gcagcgaatg ctccagccgc tgttcgggcg gcacggaggt gacttgtgtt aacattcgac
     8461 catcgataat ccgatcctcg cggtaccact gcacggcgta atacccgccg tgaagcagca
     8521 gcgccaagcc agttcccgcc aaccctcgac cgagcagcgt ccgacgggtc actcatgacc
     8581 tccggccagc ggtaacaacc gagctaaaga tgaggacttc ggggcacttt gcgccctggt
     8641 ggcgcccccc acgatcagtc atccagaata gtaggtgagt cctgatcacc ccggttgccc
     8701 acccagagca tgaagcccag cagcagcttg agtttggcgg agtccttgat gacgttcgcc
     8761 actcgaacct cctggtcggg cccgggaaga aaatggtcca gcagttcgcg gtcgatatga
     8821 tcggtggcgg ccaggcggct cttctcagct tcacggcgaa tcgcccgcca ggacgggcca
     8881 ttgaggtcgg cggtgcggaa atgatggcgt cgctcggggc cacggtgcct gggcagcgcc
     8941 accatcagcc gctcccatcg acgactcaat ccctgcctca cttggtcagc cagagaggga
     9001 tcgagcggga agggtcttcc cgaaaaccga tcgagcggga tccgcgccag cctgggaaag
     9061 tgggtccgga ccagttcgct ttgagccctc cgctcgatga gactggccag cggaatacca
     9121 ccgataaccc cttgtagcgc ccgatccaat accggcagca ccggccagga accaaagctc
     9181 atcggccaga ccattccgcc gagatggtag cgagcccggt tgcccagcac gaactgggaa
     9241 gccgcccgcc ccgccagccg cgagcgactc acgaaatcac ttcgtagatc ctcgagtacc
     9301 tgagccgcca gccggctgtc tcccagcaac cgcccgacca tctcgggagg aaagccccag
     9361 ccattggccc gcggaaagga gccctcgaat gccgacgaga gatcactgtc gaggtgttgg
     9421 gcggcgccga cgatcggtgc cagaagcatg tcgaaggcga aaccggcaac gacccgggaa
     9481 ggggtttcgg cgagctgtcc cgccagctgc cagggcgctt cccagtgaaa accgttggag
     9541 agatgctccc agcgcgactt gacccgggcg aacgactccg ccgccgcggg ctggtcgggc
     9601 cagagatgat tctccattct cagctcgcgc gcgaccaggc cggcgcagcg ggcgtcgtag
     9661 tctcccggcc atcccatggt gcaagcgacg gtaggtgtcc cctgccgcgc cagaaatccg
     9721 gccagggttc tggaatcgag gccgcctgac agcagcagtc cggtctcccg ggcgggcgga
     9781 acatgccgct gcatcacgtc ggcgactgtc tcgaacagaa tcctgatgtg ttgtgagaaa
     9841 ctcagatcgt aataccgatc ggattcggga aaccggaact gcacccgttc cagcgtggga
     9901 ccgtcggtcg ggacgtcaag aagcactccg cccggcatcc gccgaacgtc ccgatagatc
     9961 gaacgatggg ccaccagccc gttggtcgtg aggacgccgg ccagcccggc ccggtccagc
    10021 tcaaagcgaa acgcgggatg acgagggaag agcgccgccg atgacccgac cagggtgaca
    10081 gcgtcttcgc gccagtagta cagcgggtac atgcccatga tgtccccgcc gactttgagt
    10141 cccgtgccgg gcgagta
//
LOCUS       DASWKS010000614         4096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1448926, whole genome shotgun sequence.
ACCESSION   DASWKS010000614 DASWKS010000000
VERSION     DASWKS010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1448926"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1067)
                     /locus_tag="VGA78_17520"
     CDS             complement(<1..1067)
                     /locus_tag="VGA78_17520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9895735.1"
                     /translation="MRPLPLALGAILIGFPGGLRLEAQSLESRIAARQDGLVGLQFAS
                     RPDACGFGSSYIRIGNGTFIGEGTWVTSDGDLDGHSNCERGPVRVLLSRAEGRTVSLK
                     VGIGGGAWPAGTSDIGSVGAAQAASYFLAQATELDGRLGREALLPAVLADSTPVWRGL
                     LDIARNRGLSRGLRESATGWLGREGSSAGAEAREIGTALNQLASDREEPAGLRSRAVQ
                     SLARIEGHGTASLITLADAQDPVVSRAAFQALGRSSDPRARDVLRRKVRDGSVAENLR
                     HEAIRALGSRDASPADYALLREIWPRLTDNRSQDAVIDALGEAGGSENLRWLMAQARD
                     GATASSDRARAVRGAVRAGART"
     gene            complement(1070..2734)
                     /locus_tag="VGA78_17525"
     CDS             complement(1070..2734)
                     /locus_tag="VGA78_17525"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX9895736.1"
                     /translation="MHLRCLALISFAAAVPLAAQQSPRAWKGKLPPELPYKVEFDFPF
                     KFEMDGFKPGQFDFDFPFTFEMDGFKPGEFDFDVPFKYELDAMRGPDFELDPGFKLEP
                     GFPLERLGPRGQGWLHRVPQQGTPEDSAYRAARNVLSRYEYRRASELLGSFVTKYPKS
                     RYSPAAMYWRAFALYRVGTPQELALALRVLDEQRQQYPEAVEDPDVSGLTTRVLGALA
                     GRGDADATRRLQQQTQQGVQSCDKEDMEVRAEALSALVQSDPASAAPVLRRILARRDE
                     CSAPLRRRAVYLLGREGVGGTPEDLVEVAKNDPDGSVRSDALSRLAQMPGDGPIRQLD
                     LLLVGSSDERTQRAALAALRRSDHPDAQRILRRAVEREDLNENVRAEAIRSLGRRQPS
                     GVVFAERPGSAKYYRQNQPTLTAEEVTLLRGIYDKSTSRTVRSAILESIARGGGAAGD
                     QWLTSIVRDQNQELRHRSAALGRLRRSDVPIEELSKLYDALSERELRSELIRILGQRE
                     EPAATDKLFEIAKTGTDPVIRRSAINALSRKKDPRTTKLLLDMVER"
     gene            complement(2778..3401)
                     /locus_tag="VGA78_17530"
     CDS             complement(2778..3401)
                     /locus_tag="VGA78_17530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895737.1"
                     /translation="MTDLDEGQFERLMREAGAGYRTPPEPRVEAMWREIEARSFAPRL
                     RQRWGGRLALAATLILGLGIGFLAGRSRPSRATPDQVASVEPTVQLASTGATPFVGVA
                     TNYLQQMTSLLIAVAGDLKTGRVPGGTISQARDLLSTTRLLLDSGTDDPRLRDLLEDL
                     ELVLAQVVRIQNNAQMPEAALITQALNEREVLPRLTYYLADNGVAPE"
     gene            complement(3418..3960)
                     /locus_tag="VGA78_17535"
     CDS             complement(3418..3960)
                     /locus_tag="VGA78_17535"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX9895738.1"
                     /translation="MGGSADEEGLIAQVLAGDRQAARTLYDLHVRRVYRVVFRLVGDA
                     EQAEECTQDTFVKAFGQLDRFRGDSSLSTWLHAIAVSMGLSALRRRKRRFQRETDLDD
                     AAHLSSADPAGEPDLRDRLRQAIDGLPEKLRVTVVLHDIEGFTHAEIAELTGVPEGTC
                     KTRLMGGRAKLREALAAFAQ"
BASE COUNT          628 a         1475 c         1318 g          675 t
ORIGIN      
        1 gttcgggctc cggctcgcac cgccccacgg actgctcggg cccgatcgga tgaggcggtg
       61 gccccgtcac gggcctgtgc catgagccac cgcagattct cgctaccacc cgcttcgccc
      121 agggcatcga tgaccgcgtc ctgcgatcgg ttatcggtta gccggggcca gatctcccgc
      181 aggagcgcgt aatccgccgg ggacgcatcg cggcttccca gggcccggat cgcttcgtgc
      241 cgcaggttct ccgcgacgct gccatcgcgc accttgcggc ggagcacgtc ccgggctcgc
      301 gggtccgagc tccgtcccaa cgcctgaaac gccgcccggc tcaccaccgg atcctgggcg
      361 tcagccagcg tgataagcga agcggtccca tgaccctcga tgcgggccag agactgcacc
      421 gcccgcgacc ggaggccggc cggctcttcc cgatcggagg cgagctggtt caacgccgtc
      481 ccgatctcgc gagcctccgc tccggcgctg ctcccttccc gccccagcca ccccgtcgcg
      541 ctttccctga gccctcgcga caacccgcgg ttccgggcaa tgtcgagcag tccccgccac
      601 accggggtgc tgtcggccag caccgcgggc agcagcgcct ctcttcccag ccgtccgtcc
      661 agctccgttg cctgggccag gaagtaactg gccgcctggg ccgcacccac gctgccgatg
      721 tcgctggttc ccgccggcca ggcgccgccc ccgattccga ccttgaggct caccgtgcgg
      781 ccttcagccc gcgagagcag tacccgcacc gggccccgct cgcagttgct gtggccgtcc
      841 aggtcgccgt ccgaagtgac ccaggttcct tctccgatga aggtgccgtt tccgattcgg
      901 atgtaagagc tgccgaaacc gcacgcgtcg ggccgggagg cgaactgcag gcccaccagg
      961 ccgtcctgcc gggccgcgat ccggctttcg agggactgcg cttccaggcg gagtccgccc
     1021 gggaagccga tcaggatggc gccgagcgcc aggggcaggg gtcgcatggt cacctctcca
     1081 ccatgtccag caacagcttc gtggtgcggg gatccttctt gcggctgagg gcgttgatgg
     1141 cgctccgccg gatgaccgga tcggtgccgg tcttggcgat ctcgaacagc ttgtcggtgg
     1201 cggccggctc ttcccgctga cccaggatcc ggatcagctc ggaacggagc tcccgttcgc
     1261 tcagggcgtc gtacagcttc gacaactcct cgatggggac gtcggagcgg cggagcctgc
     1321 ctaacgccgc gctccggtgg cgcagctcct ggttctggtc ccgcacgatg ctggtgagcc
     1381 actgatcgcc ggcggcgccg ccgcccctcg cgatgctctc caggatggcc gatcgcaccg
     1441 tccgcgaggt ggacttgtcg tagatccccc gcagcagggt cacttcctcc gcggtgaggg
     1501 tcggttggtt ctgtcggtaa tacttggccg agcccggccg ttcggcgaag acgacgcccg
     1561 atggttgccg ccggcccagc gaccggatgg cctcggcccg cacattctcg ttcaggtctt
     1621 cccgctcgac cgcccggcgc aggatccgtt gggcgtcggg atggtcggag cgccgcagcg
     1681 cggcgagcgc cgcccgctgg gtccgctcgt cgctgctccc caccagcagc agatcgagct
     1741 gccggatcgg gccgtccccc ggcatctgcg ccagccgaga cagcgcatcg gaacggaccg
     1801 agccatccgg atcgttcttg gcgacctcga ccagatcctc cggcgtccca cccacgccct
     1861 cgcgtcccag caggtagacc gcccggcggc ggagcggcgc cgagcactca tcccgccgcg
     1921 ccaggatccg tcgcaacacc ggcgcggcgc tggccggatc ggactggacc agcgcgctca
     1981 gcgcctcggc ccggacctcc atgtcctcct tgtcgcacga ctggacgccc tgctgggtct
     2041 gctgctggag tcgtcgggtg gcgtcggcgt ctccccggcc cgccagcgcg cctaacaccc
     2101 gagtggtgag gccgctcacg tcgggatcct ccaccgcctc gggatactgc tgccgctgct
     2161 cgtccagcac ccgaagcgcc agcgccagct cctggggcgt gcccacccgg tagagggcga
     2221 aggcgcgcca gtacatcgcg gccggggagt agcgtgactt gggatacttg gtcacgaagc
     2281 ttcccagcag ctcggaggcc cggcggtact cgtaccggct caggacgttg cgggcggcgc
     2341 gataggccga atcctccggc gtgccctgct ggggcacccg gtgcagccac ccctgcccgc
     2401 gggggcccag gcgctcgagg ggaaaccccg gctcgagctt gaaccccgga tcgagctcga
     2461 agtccgggcc ccgcatcgca tcgagctcgt acttgaaggg cacatcgaag tcgaattcgc
     2521 cgggcttgaa cccatccatc tcgaacgtga aggggaaatc gaaatcgaat tggccgggct
     2581 tgaacccatc catttcgaac ttgaagggga agtcgaactc gaccttgtaa ggcagctccg
     2641 gcgggagctt gcccttccag gccctggggg attgctgggc cgcgagaggg acagccgcgg
     2701 cgaacgaaat cagagccagg caacggaggt gcatgcggag cctcatggga gaacggagtg
     2761 cctgcggcac tcggtattca ttccggcgcg acgccattgt cggccaggta atacgtcaga
     2821 cgcgggagaa cctcccgttc gttcagtgcc tgcgtaatga gcgcggcctc gggcatctgg
     2881 gcgttgttct ggattcgcac cacttgagcc aggaccagct cgagatcttc cagcagatcg
     2941 cgcaagcggg gatcgtcggt tccgctgtcg agcagcagcc gcgtggtcga aagcagatcg
     3001 cgagcctggc tgatggtccc gcccggtacc cgcccggtct tgagatcgcc cgccaccgcg
     3061 atcagcaacg aggtcatctg ctgcaggtaa ttggtggcga cacccacgaa cggcgtggcg
     3121 ccggtcgagg ccagttgcac cgtcggctca accgaggcga cctggtcggg agtagctcgc
     3181 gacggacggc tcctgccggc caggaagcca atgcccaggc ccaggatcag ggtcgcggcc
     3241 agggccaggc gaccgcccca ccgctgcctg agtcgaggcg caaaactgcg ggcttcaatc
     3301 tcccgccaca tcgcctcgac ccgcggttcc ggtggggtgc ggtagcctgc tccggcctcg
     3361 cgcatcaacc gctcgaattg tccttcatcc aggtccgtca tcaccactcc ttcccaatca
     3421 ctgggcgaac gcggccaggg cttcgcggag cttggcccgc ccccccatca gtctggtctt
     3481 gcaggtccct tcgggcacgc cggtcagctc ggcgatttcg gcgtgggtaa acccctcgat
     3541 atcgtgcagc acgaccgtca ctctgagctt ctccggcaac ccatcgatcg cctgccgcaa
     3601 ccggtccctc aagtcgggct cgccggccgg atcggccgag gagagatggg ccgcatcgtc
     3661 cagatcggtc tcccgctgga accggcgctt gcgacgccgt agggccgaca gtcccatcga
     3721 caccgcgatc gcgtgcagcc aggtgctgag actggagtca ccccggaatc ggtccagctg
     3781 gccgaatgcc ttcacgaacg tgtcctgggt gcactcctcc gcctgctcgg catcacccac
     3841 cagccgaaaa accactcgat agacccgccg gacgtggagg tcgtataggg tgcgggcggc
     3901 ctgacggtct cccgccagga cttgggcaat cagtccttct tcgtccgcac tcccccccat
     3961 ccggactccg ggttcgacac gtgtttgacg ctcggagaat ggaagcagtt ctaccctgct
     4021 gccctttggc ctgctcccca gtcatcaaca cagtcttgtt tatggtcaca atacgagcga
     4081 tattcacaat agtaaa
//
LOCUS       DASWKS010000615         4948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3631420, whole genome shotgun sequence.
ACCESSION   DASWKS010000615 DASWKS010000000
VERSION     DASWKS010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4948
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3631420"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..722)
                     /locus_tag="VGA78_17540"
     CDS             complement(147..722)
                     /locus_tag="VGA78_17540"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9895739.1"
                     /translation="MRRLEALEAVYPELERSVVVTIMGAVAAELQSIGHRPNFFYLLH
                     AMGLASSMGLGLALSRPELRVVVLDGDGSVLMNLGGLTTLARYRPRNLVHVIFDNESL
                     LSVGGFPTATSTGSDLAAIAAAAGVPRTATVRTVEEFRTAFTEAQAAEETTTLVAKVE
                     AVGPLGYITDLPMLENRFQFQRYLRGIQPQG"
     gene            complement(722..1234)
                     /locus_tag="VGA78_17545"
     CDS             complement(722..1234)
                     /locus_tag="VGA78_17545"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9895740.1"
                     /translation="MPVSITSSRLIYNALKDNGVRIVSALPETWLVHLIRMAEEDPEM
                     TLVRLAKEEEGVGVSAGAHLAGVKSAMLMQNHGFLAAVNGIVSCAQLYRIPLLMLISH
                     RGEFGEADPWQTEGGGVTEHVLDALRIPRTRLDAPDQVGRRIGQAQTLAYAAGRPVAL
                     LLCRDLMWED"
     gene            complement(1372..2715)
                     /locus_tag="VGA78_17550"
     CDS             complement(1372..2715)
                     /locus_tag="VGA78_17550"
                     /inference="COORDINATES: protein motif:HMM:NF037979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEX9895741.1"
                     /translation="MSPPAERETFASRFGTLMTMIGVAVGLGNVWRFPYMVGRFGGAA
                     FVLFYLLVVALIGVPALMAEWALGRHTRRGTVGAFAAGGLPFGRQVGWFFFFIVAAAT
                     GYYSAVIGWVLYYAVGEVASALHVRFDPSAILPPGAGFNLRSFVLQLISTGAVILACA
                     VVLLRGLRSGIERASKVIMSLLFGILVLLVLRALTLPGAMAGVDWYILKFRLADLTPG
                     VMVAAMGQAIFSLSLGGTFMVVYGSYLRATEDLGRNAAWTAAGDTAAGLLAGLAIFPA
                     VFALGLEPAAGPGLLFSTLPRVFAAIPLGWLFGLLFFAGLFGAAYLSAVAAFEVLVAG
                     LIDNTSISRKRAVWAMAAVVFVLAIPPMINNRIFVPWDLTFGSGMQTLGALLAVITVG
                     WSVKRSALLQELAGEGRPLVSPWLVRWIRFGIPAVILLVGIWWLITSVFESTAAV"
     gene            complement(2712..3857)
                     /locus_tag="VGA78_17555"
     CDS             complement(2712..3857)
                     /locus_tag="VGA78_17555"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX9895742.1"
                     /translation="MTSTTPSATDWRGRIPLLASHIPMNHCSQAPLTDLTRAAAERYL
                     ESWNRTGMDWDAWMEEVRRAKQDFARLVNASPDEIAVFSSVSEATSAVASALEFTHRP
                     KVVVSEAEFPGVGQVWLAQQRRGARVVWVPLRGGTIDPADYDGAIDGDTAIVSACHGY
                     YLNGSVQELKGLAARAHARGALLYADAYQTLGALPVDVKALDVDFLAGGCLKFLMGTA
                     GIAFLYARRELVESLYPSVTGWFGRTDPFAFRVNQLDWPPNAARFDTGTPPVMNAYIA
                     RAGMQIVAEVGLERIRACHLLLARRLIEGGRARGLTLHGRSEVEAKTVSTAFVVSDSH
                     TVEAALRARGVLASARGPVIRLAPHFYNTIEDVDTALDALAAVVAGR"
     gene            complement(3854..>4948)
                     /locus_tag="VGA78_17560"
     CDS             complement(3854..>4948)
                     /locus_tag="VGA78_17560"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX9895743.1"
                     /translation="AADLARRAPADLELAYFLSSGSEAVEAALKLARQYWVERGRREK
                     VKVLSLTPGYHGNTLLALSASGRPRYQVYFHGWLIGVPRIPAPYAYRCECGGRSAICE
                     VCSGTGLEVAIMEEGPETVAAFIAEPVGGSSTGASLPGPEYWRQVRQICDRHEVLWIA
                     DEILAGAGRTGTWSALEPYGAVPDLMTLGKGITGGYAPLSAVLAPRRIIDVLAQGSGS
                     LLHAQTFSHHPVACSAGLAALEYLDRHDLVTRSALMGELLHQQLQPLREFPIVGDIRG
                     RGLLAGIEFVADRDSRRPIPRSERFAERFAQAAMDAGLVVWPNTGHANGVDGDLIMLA
                     PPFVITEAEIDEIVTRLVATLRQLSQPIRG"
BASE COUNT          909 a         1729 c         1615 g          695 t
ORIGIN      
        1 cagctccagc gtcacaccgg gcgacgatcc gaactggggc ggcaggccga tcaccggggt
       61 ctcggggccg agcggctggg tcaggtccac gatccggacc cggcccccac gcaaagcttc
      121 gaccaattgg ttgagcaacg acatgactat ccctggggtt ggatgccgcg caggtagcgc
      181 tggaactgga agcgattctc cagcatcggc agatcggtga tgtaccccaa cgggcccacc
      241 gcctcgacct tggccaccag cgtggtcgtc tcttccgccg cctgggcctc ggtgaacgcg
      301 gtgcgaaact cctccacggt acggaccgtg gcggtccggg gcacgccggc ggccgcggca
      361 atggcggcga gatcactccc ggtggaggtg gcggtgggaa atcctcccac cgagagcagg
      421 ctctcgttgt cgaagatcac gtgcaccaga ttgcggggcc ggtagcgggc cagcgtggtc
      481 agaccgccca agttcatcag gaccgaccca tcgccgtcga gcaccaccac cctgagctcg
      541 ggccggctca gcgccaggcc aagacccatg gaggaagcca accccatcgc gtggagcaga
      601 taaaagaaat tcggccggtg accgatcgac tggagctcag ccgcaaccgc ccccatgatg
      661 gtcaccacca ccgaccgctc cagctccggg tacaccgctt ccagggcttc gagccgccgc
      721 atcaatcctc ccacatcagg tcgcggcaca gcagcagcgc caccggccgt ccggctgcgt
      781 acgccagcgt ctgggcctgg ccaatgcgac ggccgacctg gtccggcgcg tccagccggg
      841 tacgcgggat ccggagcgca tcgagcacgt gctcggtgac cccgcctccc tcggtctgcc
      901 agggatcggc ctcgccgaac tcgccccggt gactgatgag catcagcagc ggaatccggt
      961 agagctgggc acaggagacg atcccgttga ccgcggcgag aaagccatgg ttctgcatca
     1021 gcatcgccga tttgacgccg gccaggtggg cccccgcgga aaccccgacg ccttcctctt
     1081 ccttggccag ccgcaccaga gtcatctccg gatcctcctc ggccatccgg atcagatgga
     1141 ccagccaggt ctccggaagt gccgacacga tccggacccc gttgtccttg agggcgttgt
     1201 agatgaggcg cgagctggtg atggaaacag gcatgtgcga cgctgctccg gggcgtggct
     1261 ggtgtccgcg aatcaacctg gcgtccggtg cggcgtcaag ccggaaaccg ctgtcagcgc
     1321 cgcctgaccc ttccgactct tccaacccct tccgaccctt ccgactggcg gttacaccgc
     1381 cgcggtggac tcaaacacgc tggtgatgag ccaccagatt ccgaccagca ggatgaccgc
     1441 gggaatcccg aagcggatcc accggaccag ccagggagaa accagtgggc ggccttcacc
     1501 cgccagctcc tggagcaggg ccgatcgctt caccgaccag cccaccgtga tcacggcgag
     1561 cagggcgccg agggtctgca tgccggagcc gaaggtgaga tcccagggca cgaagatgcg
     1621 gttgttgatc atgggtggaa tcgcgagcac gaaaacgacg gcggccatgg cccagacggc
     1681 acgcttccgg ctgatggagg tgttgtcgat gagtccggcc accagcacct cgaacgccgc
     1741 gacggccgag agataggccg cgccgaagag gccggcaaag aacagcagtc cgaacagcca
     1801 tcccagggga atagcggcga acacccgggg aagggtggag aaaaggagtc ccggtccggc
     1861 cgctggctcg agtcccagcg cgaacaccgc gggaaagatc gccagcccgg ccagcaatcc
     1921 ggccgcggtg tcacccgctg cggtccacgc ggcattgcga cccaggtctt ccgtggccct
     1981 gaggtaggat ccgtatacca ccatgaaggt gccgcccagc gacagtgaga agatcgcctg
     2041 tcccatcgcg gccaccatga cgccgggcgt caggtcggca agccggaact tgaggatgta
     2101 ccagtcgaca cctgccattg cacccggcag ggtgagggca cgcagcacca gaagcaccag
     2161 gatgccgaac aacaacgaca tgatcacttt gctggcccgt tcgatgcccg atctcagccc
     2221 gcgcagcagg accaccgcgc aggccaggat caccgccccg gttgagatca gctggaggac
     2281 gaacgaccgg aggttgaacc cggcgcccgg tggcagaatg gccgacggat cgaacctgac
     2341 atgcaacgcc gatgccacct cgccgaccgc gtagtagagc acccagccga tcaccgccga
     2401 gtaataaccg gtggcggcgg ccacgatgaa gaagaagaac catcccacct gccggccgaa
     2461 gggtaggccg ccggccgcga acgcgccgac cgtgccgcga cgggtgtggc ggcccagggc
     2521 ccattccgcc atcagcgccg gcacgccgat cagcgcgacc accagcaggt agaacaacac
     2581 gaaggcagcg ccgccgaacc gcccgaccat atacgggaac cgccacacgt tgccgaggcc
     2641 caccgccacg ccgatcatgg tcatcaacgt gccgaagcgg gaagcgaagg tctctcgctc
     2701 ggctggtggg ctcaccgacc cgccacgacc gccgccaggg cgtccagcgc cgtatccaca
     2761 tcctcgatgg tgttgtagaa gtgtggcgcc aggcggatca ccggcccgcg ggcggacgcc
     2821 agaacgccgc gggcgcggag cgccgcctcc accgtgtgcg aatcggagac gacgaacgcg
     2881 gttgacacgg tcttggcctc gacctccgac cggccgtgca gcgtgaggcc ccgggcccgg
     2941 ccgccttcga tcaggcgccg ggccagaagc agatgacagg ccctgatccg ctcgaggccc
     3001 acttcggcca cgatctgcat accggcgcgg gcgatataag cgttcatcac cggcggcgtc
     3061 ccggtgtcga accgagcggc gttaggcggc caatccagct ggttcacccg gaaggcaaac
     3121 ggatcggtcc ggccgaacca cccggtgacc gatgggtaaa gcgattccac cagctcccgc
     3181 cgcgcgtaca ggaacgcgat gcccgcggtc cccatcagga acttgaggca acccccggcg
     3241 aggaaatcga cgtcgagtgc cttcacatcc accggcagcg cgcccagggt ctggtaggcg
     3301 tcggcgtaga gcagggcgcc ccgcgcgtgc gcccgcgccg ccagcccttt gagctcctga
     3361 accgacccgt tcaggtaata gccatggcag gcgctgacga ttgccgtgtc gccgtcgatc
     3421 gcgccgtcgt agtccgccgg atcgatggtc ccgccccgga gcggaaccca aacgacccgt
     3481 gccccccggc gctgctgcgc cagccacacc tgtcccacgc cggggaactc ggcttccgac
     3541 acgaccacct tggggcggtg ggtgaattcg agcgcgctcg ccacggcact ggtggcctcc
     3601 gacaccgagc tgaagaccgc gatctcatcg ggggaagcgt tcaccagccg ggcgaagtcc
     3661 tgtttcgccc gccgcacctc ctccatccac gcgtcccagt ccatgccggt gcggttccat
     3721 gactccagat accgctccgc cgcggcccgg gtgaggtcgg tcaggggcgc ctgggagcag
     3781 tgattcatcg ggatgtgcga ggccaggagt ggaatgcggc cgcgccagtc ggtggcgctc
     3841 ggcgtggtcg atgtcatccg cggattggct gggaaagctg tcgaagcgtc gccaccaggc
     3901 gggttacgat ttcgtcgatt tccgcttcgg taatcacgaa cggtggcgcc agcatgatca
     3961 gatcgccgtc taccccattg gcatggccgg tgttgggcca gaccaccagg ccggcatcca
     4021 tggcggcctg tgcgaagcgt tcggcgaacc gctccgatcg gggaatcggc cggcgcgaat
     4081 cgcggtcggc cacgaactcg atgccggcca gcaggccccg gccgcggatg tctcccacga
     4141 tcgggaattc ccgcaatggc tgcagttgct ggtgcagcaa ctcgcccatc agggcacttc
     4201 gggtcaccag gtcgtgccgg tcgagatact cgagcgccgc caggccggcg ctgcacgcca
     4261 ccggatggtg ggaaaaggtc tgggcgtgca gcagtgatcc cgacccctgc gccagcacat
     4321 cgatgatgcg acggggtgcc agcaccgcgg aaagtggagc gtagccgccg gtgatgccct
     4381 tgcctaacgt catcaggtcg ggcacggccc cgtacggttc cagcgccgac caggtgccgg
     4441 tccggccggc tcccgccagg atctcgtccg cgatccagag cacctcgtgg cgatcgcaga
     4501 tctggcgtac ctggcgccag tattccggtc ccggcaatga cgccccggtc gatgagccgc
     4561 ccaccggttc cgcgataaac gcggcgaccg tctccggacc ttcctccatg atagcgacct
     4621 ctagcccggt gcccgagcac acctcacaga tcgcggatct tccaccgcat tcgcagcggt
     4681 aggcgtaagg cgccgggatc cgcggcacgc ctatcagcca gccgtggaag tagacctggt
     4741 agcgaggccg ccccgacgcc gacagggcca gcagggtgtt gccgtgatag ccgggagtga
     4801 gcgagaggac cttcaccttc tctctgcgcc cccgttccac ccaatactgc cgagccagct
     4861 tgagcgccgc ctctacggcc tcggaaccgc tgctgaggaa gtaggcgagt tccaggtcgg
     4921 cgggggcccg ccgcgccagg tcggccgc
//
LOCUS       DASWKS010000616         6053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1843238, whole genome shotgun sequence.
ACCESSION   DASWKS010000616 DASWKS010000000
VERSION     DASWKS010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843238"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1065
                     /locus_tag="VGA78_17565"
     CDS             <1..1065
                     /locus_tag="VGA78_17565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895744.1"
                     /translation="DAPSARPRGDFNFGSTLWHELAHTFTLGATDHRIPRWFSEGLSV
                     HEERKARAGWGQGVRLSFLAALKQNKLLPVSRLNDGFVRPTYPEQIGHAYYQASLVCD
                     MIEQTRGQAALRSMLDGYRGGLGTAEVFRRALKVEPDGFDREFEGWMRQRFAKSLDAI
                     GGGERDGPFQRELTAALAVLRAGNTAEATTRFEQARALFPGYAERDNPYWHLAKIHRD
                     RGDLRRAAQELGRLTALAETDFDANIAEAEVREKLGDAAGAAAALERAAWIDPREPAL
                     HDRLATLYARTGDWRKVARERMAVLALNPVDQAEARYQLALAWFEAGDMAAARREVLR
                     ALEVAPSFERAQELLLRIPR"
     gene            1145..1876
                     /locus_tag="VGA78_17570"
     CDS             1145..1876
                     /locus_tag="VGA78_17570"
                     /inference="COORDINATES: protein motif:HMM:NF025086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEX9895745.1"
                     /translation="MILLFLLGAGSVLAQRRRNSDALPNAAYDGKFTFLRIRYDPGSG
                     GFGDGTFGGRDPKWNHDYPRAELHFSKILKELSLVQAYLGGGNVLMADDPELFKYPIA
                     YISEPGFWTVNEKEAEALRNYLLKGGFLIFDDFEGNHWYNFERQMRLVLPNARLVRLD
                     ASHPIFDSFFRIESLEFVSYRGVSEFWGIFEDNDPAKRLLAMVNYNSDIAEYWEWSDT
                     DFAPIELTNEAYKLGVNYVIYAMTH"
     gene            1978..2997
                     /locus_tag="VGA78_17575"
     CDS             1978..2997
                     /locus_tag="VGA78_17575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX9895746.1"
                     /translation="MTTLEAPPDDLRTAERLKTGYGQILAELRKVIVGQDDVIEQVFI
                     GLVAGGNCLLVGVPGLAKTLLIHSVAQALDLKFSRIQFTPDLMPSDVTGTDIVQDDPA
                     TGRRRLTFTPGPIFANIVLADEINRTPPKTQSALLEAMQERRVTVLGRTYTLDPPFFV
                     FATQNPIELEGTYPLPEAQLDRFMFEVILDYSSEAEEIEIVKRTTAIQTPSFSHALSG
                     ADILGFQDLVRRVPAADPVVRYAVHLARRSRPVEADAPDFVKQYLLYGASVRAPQSLI
                     LGGKARALLHGRYHVSFEDIRALAKPVFRHRLLLNFHAQSERVSTDQVVEKLIEAVPV
                     PSSGL"
     gene            3000..3911
                     /locus_tag="VGA78_17580"
     CDS             3000..3911
                     /locus_tag="VGA78_17580"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX9895747.1"
                     /translation="MPIHDQLPSTTFLDPKVLAAIGNLELLARTVVDGFLHGVHRAAR
                     LGLSMEFAQHRQYMPGDDIRKVDWRVYGRTDRFYVKEYEAETNASVMLLLDISPSMTY
                     SSGGVSKLDYGRFLAASLAWFSARQRDRVGLVLFDQNIVEHVPPSTRQLQTILHVLDQ
                     LQPGVKGSLVAPLERVAERLTRRGIVVLISDFYEEPDRVRDAIALLRAGGSDVLALHL
                     LDPAEMTFPFEAAATFEDLESGDRVPVVPEDLRGRYRELVREHLETLSRHMAATRVDY
                     DVIDTSKPLDFALHSYLARRHELRRTR"
     gene            3908..5968
                     /locus_tag="VGA78_17585"
     CDS             3908..5968
                     /locus_tag="VGA78_17585"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HEX9895748.1"
                     /translation="MNPLAFLVPAFLAGMAALAIPVLVHLRHRERKEPVRFPSLMFLR
                     RIPFREVRRQQIQHWPLFLLRVLVVTLLVLAFARPFLRGGDTPLVAPGAQGREVAILL
                     DRSASMGYGSRWARAQAAARQTLEGLGRDDRAALVLFDEQAAVVARPGSDRALVRAAI
                     DGATPGSATTRYGPALRAAAELLGGTHLPRREAVVVSDFQRTGWRGEDLDPLPEGTVL
                     RRVDVAGGPAPNLAVIGAEVTPTGTGGRAGIAVRTRVAATGLSRPLSTQASLLINGRV
                     VQARDLSVPGDGVVAVVFDPVEVPPGNARGEVRLQPADSLLLDDTYRFVATGERPLRV
                     LLIQNEASTPFLTRALEISRAPRVELTTRSLLRVPDLATTDAVFLDNVPFPVGDAGRR
                     LGGFVREGGGLIISLGGNAGGWPQALIPARIGATVDRVPAGARLGALRREHPLFEPFR
                     GPRSGDFGATRVWRFRQLDADSLDVLARYDDGSAALAESRLGRGRILLWSSALDNVWS
                     DLPLQPVFLPLVHQLALYAAGYVERSPAWAVGEVASLGGEQLDNRQGAVVVQSPSGER
                     VRREVSAGVLAIALNEGGFWEVREAGSGGRLLATLAANVPAEEARLEWFDPADLRLAT
                     GAVDSLGSGPAPGDLTPQETERRQGLWWYVLAAVVLLLGAETLVANRRPGMVRVPVQQ
                     GGRG"
BASE COUNT          908 a         1985 c         2106 g         1054 t
ORIGIN      
        1 gacgcgccct cggcccggcc caggggagat ttcaatttcg ggtcgaccct ctggcacgaa
       61 ctggcccaca cgttcaccct gggcgccacc gatcatcgca ttccccgctg gttctccgaa
      121 ggactgtcgg tgcacgagga gcgcaaggcc cgcgccggct ggggacaggg ggtccggctc
      181 tcctttctgg cggcgctcaa acagaacaag ctgctcccgg tcagccggct gaacgacggt
      241 ttcgttcgac cgacctaccc ggagcagatc ggtcacgcct attaccaggc ctcactggtc
      301 tgcgacatga tcgaacagac ccggggacag gccgccttgc gctccatgct cgacggctat
      361 cgcggcgggc tgggcacggc cgaggtcttc cgacgggccc tcaaggtgga gccggacggg
      421 ttcgaccggg aattcgaggg ctggatgcgg cagcgcttcg ccaagtcgct cgatgccatc
      481 ggcgggggcg agcgggatgg gccgttccag cgggagctca cggcggcgct ggcggtcctc
      541 cgagccggga acaccgccga ggcgacgacc cggttcgagc aggcccgggc cctcttcccg
      601 gggtacgccg agcgcgacaa tccttactgg catctggcga agatccatcg cgatcggggc
      661 gacctgaggc gggccgccca ggagctgggc cgcctgaccg cgctggccga gaccgacttc
      721 gacgccaaca ttgccgaggc ggaagtgcgg gaaaagctgg gcgacgcggc cggggcggcg
      781 gcggcgctgg agcgggcggc ctggatcgat ccacgcgagc cggcgctcca cgaccggctg
      841 gccacgctgt acgcccggac cggggactgg cgcaaggtcg cccgcgagcg gatggcggtg
      901 ctggccctca atcccgtgga tcaggccgag gcccgctacc agctggcgct ggcctggttc
      961 gaggcgggtg atatggcggc ggctcggagg gaagtgctgc gggcgctcga ggtggcgccg
     1021 tctttcgaac gagcccagga actgcttttg cgtattccaa ggtaggctac caatggtcga
     1081 aggcggtcga aggcggtcga aggcggtcga agggcgacgc tggtccaagg cggttcgctc
     1141 cgtcttgatc ctgctttttc tgctcggggc cggtagcgtg ctggctcagc ggagacggaa
     1201 ttcggatgcg ctgccgaacg ccgcctatga cggcaagttc actttcctgc gaattcgcta
     1261 tgaccctggc tcgggtggat tcggtgacgg taccttcggg ggccgggacc ccaagtggaa
     1321 tcacgactat ccccgggccg agctgcactt cagcaagatc ctgaaagagc tgagcctggt
     1381 tcaggcctac ctgggtggcg gtaatgtgct catggccgat gacccggagc tgttcaagta
     1441 ccctatcgcc tacatcagcg agccggggtt ctggacggtg aacgagaagg aagccgaggc
     1501 cctccggaac tacctgctca agggcgggtt cctgatcttc gatgactttg agggaaacca
     1561 ttggtacaac ttcgagcggc agatgcggct cgtgctgcca aatgcgcggc tggttcggct
     1621 cgatgccagc cacccgatct tcgactcgtt tttccggatt gagtcgcttg agttcgtatc
     1681 gtatcgtggc gtgtcggagt tctggggcat tttcgaggat aatgatcccg ctaagcgcct
     1741 attggccatg gtcaactaca acagcgacat cgccgagtac tgggagtggt cggacaccga
     1801 cttcgccccg atcgagctga ccaacgaggc gtacaagctg ggcgtgaact acgtgatcta
     1861 cgccatgact cactgagaaa caggaaccag ggaccaggga ccagggaaca ggaggcaggt
     1921 aaccttccca ccttccctgc tccctgctcc ccgcttcctg taccgaaagg atcggacgtg
     1981 accaccctcg aagcgccccc cgacgacctt cgcaccgctg agcggctgaa gaccggctac
     2041 ggccagatcc tggccgagct ccggaaggtc atcgtgggtc aggacgacgt catcgagcag
     2101 gtcttcatcg gcctcgtggc cggcggcaac tgcctgctgg tgggcgtgcc cggtctggcc
     2161 aagacgctgc tgatccattc ggtggcgcag gcactggacc tcaagttctc ccggatccag
     2221 ttcacccccg atctgatgcc gtcggatgtc accggcaccg acatcgtgca ggacgatccc
     2281 gccaccggac ggcgccggct gaccttcacg cccggcccca tcttcgccaa catcgtgctg
     2341 gcggacgaga tcaaccggac cccgcccaag acccagtcgg cgctgctgga ggcgatgcag
     2401 gaacggcggg tgacggtgct ggggcgcacc tacaccctcg atccgccctt cttcgtgttc
     2461 gccacccaga atccgatcga gctggaaggg acctatcccc tccccgaagc ccagctcgac
     2521 cggttcatgt tcgaggtgat tctggactac tcctcggagg ccgaggaaat cgagatcgtc
     2581 aaacggacca cggcgatcca gaccccgtcg ttctcccacg ccttgagcgg cgcggatatc
     2641 ctgggctttc aggatctggt gcgacgggtc cccgcggccg atccggtggt gcgctatgcg
     2701 gtccacctgg cccggcggtc ccggccggtc gaagccgatg cccccgactt cgtcaagcag
     2761 tatctgctct acggcgccag cgtgcgcgcc ccccagagcc tgattctggg cggaaaggcg
     2821 cgggcgctgc tgcacggacg ctatcacgtc agcttcgagg atattcgagc gctggccaag
     2881 ccggtgttcc gccatcggct gctgctcaac ttccacgccc agtcggagcg ggtcagcacc
     2941 gaccaggtgg tcgagaagct gatcgaggcg gttccggtac cgagttccgg gctctgatcg
     3001 tgccgatcca cgaccagctt cccagcacca cgttcctcga tcccaaggtc ctcgcggcca
     3061 tcgggaacct ggagctgctg gcccgtacgg tggtggacgg gtttctgcac ggggtgcacc
     3121 gcgccgcccg cctggggctg tcgatggagt tcgcgcagca ccggcagtac atgcccggag
     3181 acgacatccg gaaggtggac tggcgggtgt acgggcggac cgaccgtttc tatgtcaagg
     3241 agtacgaagc ggaaaccaat gcgtccgtga tgctgctgct cgacatctca ccgtccatga
     3301 cctactccag cggcggggtc agcaaactcg actatggccg ttttctcgcc gcgagtctgg
     3361 cctggttttc ggcccggcag cgcgaccggg tagggctggt gctgttcgac cagaacattg
     3421 tcgaacacgt tcccccgtcc acccgccagc tgcagaccat cctgcatgtc ctcgaccagc
     3481 tgcagccggg agtcaagggc agcctggtgg cgccgctgga gcgagtggcg gaacggctga
     3541 cccggcgcgg catcgtggtg ctgatttccg atttttacga ggaacccgac cgggtgcgcg
     3601 acgcgatcgc gctgctccgg gcgggcggct cggatgtgct ggcccttcac ctgctcgatc
     3661 cggcggaaat gaccttcccc ttcgaagccg cggccacctt cgaagatctg gagagcgggg
     3721 atcgggttcc ggtggtgccg gaggatctgc ggggccgcta ccgcgagctg gtgagagagc
     3781 acctcgagac gctgtcccgg cacatggccg ccacccgggt cgattatgac gtgatcgata
     3841 catccaagcc gctggacttt gccctgcatt cctacctggc tcgtcgtcac gagctcaggc
     3901 ggacccggtg aacccactcg cgtttctggt tcctgcgttt ctggccggca tggcggcgct
     3961 ggcgattccg gtgctggtgc acctgcgcca tcgggagcgc aaggagccgg tgcgattccc
     4021 ctcgctcatg ttcctgcggc ggatcccgtt tcgggaggtg cggcggcagc agatccagca
     4081 ctggccgctg ttcctgcttc gggtgctggt cgtgacgctg ctggtgctag cctttgcccg
     4141 gcccttcctc cggggcggcg acacacctct ggtcgcgccc ggggcccagg gccgggaagt
     4201 ggcgatcctg ctggaccgct cggccagcat gggctacggc agccgctggg cccgcgccca
     4261 ggccgcggct cgacagacac tggagggtct gggccgggat gaccgcgccg ccctggtgct
     4321 gttcgacgag caggccgcgg tggtcgcccg gccgggctcg gaccgggccc tggtacgagc
     4381 cgcgatcgat ggcgcgacgc cggggtctgc cacgacccgc tacgggccgg ccctgcgggc
     4441 cgccgcggag ttgttaggcg ggacccatct gccgcgccgg gaggcggtgg tggtcagcga
     4501 tttccagcgg accgggtggc gtggggaaga cctcgacccg ctgcccgaag gcaccgtcct
     4561 ccggcgggtg gacgtggccg gcgggccggc gcccaatctc gcggtcatcg gcgccgaggt
     4621 caccccgacc gggaccgggg ggcgggccgg gatcgcggtg cgcacccggg tcgcggccac
     4681 cgggctcagc cggccgctct ccacccaggc ttccctcctc atcaacgggc gcgtcgtgca
     4741 ggctcgtgac ctgtcggtgc cgggcgatgg agtggtggcc gtggtgttcg acccggtcga
     4801 ggtcccgccc ggcaacgcgc gcggcgaagt ccggttgcag ccggccgatt cgctgttact
     4861 cgacgatacc tatcgcttcg tcgccaccgg tgagcgtccc ctgcgggttc tgctcatcca
     4921 gaatgaggcg agcacaccct tcctgacccg ggccctggag atcagccggg ctccccgggt
     4981 cgagctcacc acccggtcac tactccgggt cccggatctg gcgacgaccg acgcggtttt
     5041 tctggacaac gtgcccttcc cggtcgggga cgcgggtcgt cggctgggcg ggttcgtgcg
     5101 cgaaggtggc ggtctgatca tctccctggg agggaacgcg ggcggctggc cccaggccct
     5161 gattcccgct cggatcggag ccacggtcga tcgggttccg gccggtgccc ggttgggcgc
     5221 gctgcgaagg gagcaccccc tgttcgagcc cttccgcggc cctcgctccg gtgatttcgg
     5281 tgccacccgg gtgtggcgct tccggcagct cgacgccgac tccctcgacg tgctggcccg
     5341 atacgacgac gggtcagccg cgctggcaga atcacggctg gggcggggac ggatcttgct
     5401 gtggagctca gcactcgaca acgtctggag cgatctgccc ctccagcccg tgtttctgcc
     5461 gctggtgcat caactcgccc tctacgcggc tggctatgtg gaacggtcgc cagcctgggc
     5521 cgtgggtgag gtagccagtt tgggtggcga acagctggac aaccgccagg gcgccgtcgt
     5581 ggtgcaaagt ccgtcgggcg aacgggttcg tcgcgaggtc tcggccgggg ttttggctat
     5641 cgcgctgaac gaaggcggat tctgggaggt ccgggaggcc ggttcggggg gtcgtctcct
     5701 ggcgacgctg gccgccaatg tgcctgccga ggaggctcgc ctcgaatggt tcgatccggc
     5761 tgatctgcgg ctcgccaccg gcgcggtcga ctcgctcgga tcgggccccg cgcccggaga
     5821 cctgacaccc caggagaccg agcggcgtca gggcttgtgg tggtatgtgc ttgccgcggt
     5881 ggtccttctt ctcggagccg aaacgttggt tgccaaccgc cggcctggta tggttcgggt
     5941 gccggtgcag cagggaggtc ggggatgagt cccatgtcac gcagtgagct caaggagctg
     6001 gtgggccggg ttcggggccg ctggcgcctg cggatgacgc tccagggcgt cgg
//
LOCUS       DASWKS010000617        10313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_327444, whole genome shotgun sequence.
ACCESSION   DASWKS010000617 DASWKS010000000
VERSION     DASWKS010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327444"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..372
                     /locus_tag="VGA78_17590"
     CDS             28..372
                     /locus_tag="VGA78_17590"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEX9895749.1"
                     /translation="MTLIPFRGQVWLVNLDPTKGHEQGGTRPCLVVSANKFNHGRAEL
                     VVVVPITTRDKGILSHVKIPQGEGGLKDDSYIKCEEVRCISKSRLERPLNSVTPETMV
                     AVEERIELILDL"
     gene            complement(768..1490)
                     /locus_tag="VGA78_17595"
     CDS             complement(768..1490)
                     /locus_tag="VGA78_17595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895750.1"
                     /translation="MKKDHLLGVLVLPLFACGGDDLLPPAPPPPPLSQALAIVSGNSQ
                     QGTTGEFLAEPFVVRVTNPQGTGVSSVPVTWTVVSGAGGFGLPSSITPTAADGVASMS
                     FRPTTPGTITVNAKADGVQGSPATFTVDVIGPVPPVVVLIRFGPLFDCYGAPSPQDPS
                     IFEGPEGTIPVGALVEWEYADWLPPVCGAQLRSVSVPPGGLPFDSGIIRPGQRWGVVL
                     EAAGDWLVTDVLNGGSVTLRVQ"
     gene            1627..3624
                     /locus_tag="VGA78_17600"
     CDS             1627..3624
                     /locus_tag="VGA78_17600"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX9895751.1"
                     /translation="MFSLKLFGGVSLEGDDGPLTGPAVQRHRLALLAVLGASRPRVLT
                     RDKLMAWLWAERDTEHARGLLNQAVHVLRRTLGAEAILSAGEELQLNPAGVSCDVIAF
                     EEAVAAGGLQQAAALYAGPFLDGFFLSDAPEFERWAERERQRLAASYAGVLESLAERA
                     GAEKNWRRAVEWWKVRVAQDPYDSRAVGRLMLALEASGNRAAAMVQADAHHRLLQEEL
                     GMEPSSEVRALAERLRSSPAKGASWLSVEPTSSSPESEPAASGADLPGAPAGASRSRR
                     RRPLLRYGAAAILMVGVVLAAVRLSSDRTARRSAAGNAPAITVDEIARAVAAELDRRE
                     RGDTAVRLRQHRTQSIAAYELYLRGSDPALLRSDSAARLGLDHFRRAVALDTTYAAAW
                     AGLARMTLRTNREYNPSTSAAAEAAARRAVALDDSLAEAHATLGIIRMRQYDLAGAES
                     QYRRAIVLEPGTALYHEWLGKVYLWTGRATEALAAARRALELSPLSPSANAELARGLL
                     ANGRCDEALAQLEKIAGLEPPLARVPGIAAQCYAQKRMLPEAIATIRPQADEGGTSLG
                     LLGYLLARAGQREEASRILAKLLDQKPTEGEASWPIALVYIGLRDLEQAIPWLHRAVD
                     RHSLHAATEPPPLAATVLDPLRADPRIERLLQRMALGPQNR"
     gene            complement(3612..6827)
                     /locus_tag="VGA78_17605"
     CDS             complement(3612..6827)
                     /locus_tag="VGA78_17605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895752.1"
                     /translation="MPNRVAPRWRLLDVVGTTLVLTTLGFPRAGAASSGSAALTQGVT
                     TAAVRGTVRIGDGSDPSGVRVSVRNSATGFVVEADLRNGRFFIQGLEVGGPYHITVRR
                     IGVRPERRDIGFLSLGEPYELHLVLEPAPVQLDSLVVVLPAGRFSRSNSHGGTATTIT
                     DSLLHHLPSLNRDLYDFVRLVPQISTRIGLGFAGISGGGVGFRFNQFLTNGVPERSLA
                     GGQPPEFAGGKSLPFEAVGEYQVLLAPFDVRYGDFAGAAVNTVTRSGTNQFRGSLFGQ
                     FRNDALARGDTLPYERGVFGFSLSGPIAKDRVHFLIATEFQRLTEPMAGPYVGQPADM
                     TQPVPVREADLARLETIMRSYGLTAGSGGAVQNRNPLRNVFARLDAAIPNVSSRAVLW
                     LSDAESENLSFARLARDTTFALSSQASTSELGIRTRALQIHTALPRRGGGHNELFLSR
                     RSTRLRSLPEVRQPIVTVAVPGATGGGVISVITGTPTQAQGGDTRSRSVNLRDNLTLP
                     LGRSHVASFGIEAEWFRVEPGGLLNSFGTWGFLSLDSLATGLAERFEVARDLGGGSIP
                     LTGAQYSAYAGDHWLLGGRLSLTLGVRADLLDIDGRPPYNRAVDSIFGRRTDQLPGAH
                     VHLSPRFGFTWNPDGTGRDQVRGGVGIFTGRPPLAWFHTPLRNYGFGTGILRCGRSAG
                     SQGPAPPFEPDPLMPPTACAGGSNGVPTGDVELVDRRLRMARTLRGVLAWDRRLPGDL
                     LATAEALFTRNLSDFIFVNLNLVGPQSADQHGRTLYGTIDALGRASPALRTRSFPSVI
                     DLQSVSANYSIQLSARLEKRFSGGLAAMAAYTWSRVRDVQTPLRVNTRGVVNWSSRAV
                     SGRHEDLSAGVSLNDVPHRIILAGTWRAPWPRWTTELSFLYVGESGSPFTYLAFGLRP
                     LGDLNADGSAANDPIYVPRDATDPGEIVFSDQAQAVAFERFIEDSPCLRRQRGRIMER
                     NSCREPWSHTSVVSLRQRVPVVGRGIEAQLDVFNLLNLLNGSWGIRRVAAPEFLEHVG
                     QTTGPTGNQQPVFRFQDVASPWTILPAESAFQLQLGVAYRF"
     gene            7042..7701
                     /locus_tag="VGA78_17610"
     CDS             7042..7701
                     /locus_tag="VGA78_17610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895753.1"
                     /translation="MSPRRTRSTIVGLFVAALWGLGCSGVTTPEAPAENALAAHPGIH
                     AVSQSEEKGYIDGWFDGGEVQLYYTKSYFCAEPPSSGAPSDCEIGAPAEVAPRPGPIP
                     TIYAIAAVGFQPDPATVACLRGSPCLNHPAMIDVSRTGGPVDAQALSHSHILDARGGG
                     WFHTVNIRVFSATAWDEIAAAKTLAKVRELQGDNPAVGVPGVISADTDTNIYFFIAGW
                     R"
     gene            7903..8307
                     /locus_tag="VGA78_17615"
     CDS             7903..8307
                     /locus_tag="VGA78_17615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895754.1"
                     /translation="MGLLERLGLRKPPPVALAGWLGRQLERIVPTDGRAGPGPDEALR
                     MLDALDQRVYRFHRKYDMHTLVLAIALWAAGTSDRVVMVHTKLVRRTDLLAVTVNELG
                     KRRKGSGKGLILLQQAVKDAGFMDGPTLLEGQ"
     gene            complement(8453..9709)
                     /locus_tag="VGA78_17620"
     CDS             complement(8453..9709)
                     /locus_tag="VGA78_17620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895755.1"
                     /translation="MLTPARVRKFAAALLGGLFCVLLTVGRLRAQAAGPAPEPTKATY
                     WVYVGAESADLIHRVRFGPPPGGAVVEKTIPVGEFAAEMEGPHGLAISRDGKYLHLTT
                     GHGFPDGKYWRYALGPDTLVGRGTLLGNFPASIDISPDGLYAIAANFNLHGDMVPSSH
                     SVIYTPTQTEVSRVITCTMPHGSRIEPSGQFHYSGCMMDDQLVEIDTRSFEVSRRFSV
                     AKGKEGPLPADDRGEMARHLADASPRPAPPRPAPEVDPADVGYRGMRHPMKPNSCSPT
                     WAQPSSDGKKVYVACNKSDEVLEIDRAGWAVSRRFATGRGPYNLAVSPDGRYLVATLK
                     QGGAVELFDLGTGASVATLKTSTTVTHGVVVSPDSRYAFVSSEGVRAEPGKVDVFDLA
                     ARVKVGTVDVGQQASGIAFWKMEPAP"
     gene            9807..>10313
                     /locus_tag="VGA78_17625"
     CDS             9807..>10313
                     /locus_tag="VGA78_17625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895756.1"
                     /translation="MKLIPSVHVSIRIALLSCLAAPLAPELQAQAQQAVARLTAEPSS
                     LRLRVGDSARITVKAYDAQGREIPDAQIRVFGARRTVGYQDGLVRAFRAGNFTLTAAA
                     PGADAVPVMLEIPVTATWPAIAKLEIVPAPGGGPLYTGVTLAHSAKGYLADGTERVDL
                     KPTWRSSND"
BASE COUNT         1731 a         3418 c         3521 g         1643 t
ORIGIN      
        1 agttctgaca ccgggattgg tggctaggtg accctcattc cttttcgtgg ccaggtgtgg
       61 ctggtcaacc ttgatcccac aaaggggcat gaacagggag ggacgcgtcc gtgcttagtc
      121 gtctcggcaa acaagttcaa tcacggtcgc gcagaactgg tcgtggtcgt accaatcacg
      181 acccgagata agggaatcct gtcccatgtc aagattccgc agggggaagg tggtcttaag
      241 gacgatagct acatcaaatg cgaggaagtc cgctgcatct cgaaatcccg actcgagcgc
      301 cccctgaact cggtcacgcc cgagacgatg gtggccgtcg aggaacgcat cgagctcatt
      361 ctcgacctgt agcaaagccg cggcgatccc tccagaccat actgtgccgc ggcgctggcg
      421 ccggatcagc gcggcctggt ccgctgcgaa tgctggttat gccctgccgc gcacaacggc
      481 ccgctcgaga catacaatga tctcgcgatt gaggctgcgg cggtgggctt cagcctgttg
      541 cttcagacgt ggatagaggg ggtccggcaa gcccttgatg gtgagcgtcg gcatcgatcc
      601 ggttcctgat tggtaccaca acggaaccta agcttgggta ctccgttaag acggcttgat
      661 cgtgaggcag tctccggtga tgggcggcca gatgaatccc gcccctacag gaatccggcg
      721 ccgggcgggc gggatgaatc ccgcccctac aaggatttcg gcccggacta ttggaccctc
      781 aacgtcacac tcccgccatt gagcacgtcc gtaaccagcc aatcgccggc agcctccagg
      841 acgacccccc agcgttgacc cggtcggatg attccgctgt cgaagggtaa cccaccggga
      901 ggcaccgaga cggaacgcag ttgggccccg caaaccgggg gtaaccagtc cgcgtattcc
      961 cactccacca gagcccctac ggggatggtg ccctcggggc cctcgaaaat ggagggatcc
     1021 tgcggcgacg gcgccccgta gcagtcgaac aacggcccga aacggatgag caccacgacc
     1081 ggcgggaccg ggccgatgac gtcaacggtg aaggtcgccg gcgaaccctg gacgccgtcc
     1141 gccttggcgt tcaccgtgat ggtgccggga gtggtgggcc ggaaggacat cgatgccaca
     1201 ccgtcggctg cggtgggggt gatcgagctg gggagcccga acccacccgc gccggagacg
     1261 acggtccacg tcacaggtac gctggagacg ccagttccct gcggattggt cacccgaacc
     1321 acgaacggct cggccaggaa ctcgccggtc gtcccttgct ggctgttgcc ggagacgatg
     1381 gccagcgctt gggaaagtgg aggtggaggc ggtgcagggg gcaggagatc gtcgcctccg
     1441 caggcgaaca gtggcaggac caggacacca agcaggtgat cttttttcat ggggcttctc
     1501 tctctgtgac cgcccgctgc cttgggctgt gaccagggtg ttcggcagca ggtcgagggg
     1561 ttaagatggc tcgaatcaat gaacccccga tctgcgcacg cttaatgacc ggttaacggg
     1621 tctatcgtgt tttccctcaa gctcttcggc ggggtttccc tggagggcga cgacggcccc
     1681 ctgaccgggc cggcggtcca gcggcaccgg ctggccctgc tcgccgttct gggcgcctcc
     1741 cgcccgcggg ttctcacccg tgacaaactg atggcctggc tctgggccga gcgggatacc
     1801 gaacacgccc gcgggctcct gaaccaggcg gtgcacgtgc tgcggcggac gctgggcgct
     1861 gaggccatcc tctctgccgg ggaggagctg cagctcaacc ccgccggggt gtcctgcgac
     1921 gtgatcgcgt tcgaggaggc ggtggcggcc ggcggcctgc agcaggccgc cgccctctat
     1981 gccggaccct tcctcgacgg cttcttcctg agcgatgccc cggagttcga gcggtgggcg
     2041 gagcgcgagc gccagcgcct ggccgcgtcc tacgccggcg tgctggagtc gctggcggaa
     2101 agggccgggg cggaaaagaa ttggcgccgg gcagtggaat ggtggaaggt ccgggtggcc
     2161 caggatccct acgactcccg ggccgtcggg cgattgatgc tggccctcga agcctccggc
     2221 aatcgggctg cggcaatggt ccaggccgac gcgcatcatc gcctgctcca agaggagctg
     2281 ggcatggagc cgtcttcgga ggtacgggcc ctggccgagc ggcttcgttc gtcccctgcg
     2341 aagggcgcct cgtggttatc cgtcgagccc acatcatcct cgcccgagtc cgaaccggcc
     2401 gcatcgggtg cggatctccc cggtgctcct gccggggcca gccgctcacg gcgaaggcgc
     2461 ccgcttctcc gctatggcgc cgcggcgatt ctcatggtcg gtgtcgtgct ggcggctgtc
     2521 cggctgagtt ccgaccggac cgcgcggcgc tccgccgcgg ggaacgcgcc ggctatcacg
     2581 gtggacgaga tcgctcgggc ggtggccgcg gagctggacc ggcgtgagcg cggggacacc
     2641 gcggtgcggc tgcgccaaca ccggacccaa agcattgcgg cctacgagct gtacctccgc
     2701 ggcagcgatc ccgccctgct caggagcgac agcgccgccc gattgggcct cgaccacttt
     2761 cgccgggccg tggcgctcga tacgacctat gcggcggcct gggccggcct ggcgcgcatg
     2821 acgctcagga cgaaccgcga gtacaatcca tccacgagcg cggccgcaga ggccgcagcc
     2881 cggagggcgg ttgccctgga tgattcgctg gccgaggccc acgcaacgtt aggcattatc
     2941 cggatgcgcc agtacgacct ggctggggcc gaatcgcaat accggcgcgc gatcgtactg
     3001 gagccaggca ccgccctcta tcacgagtgg ctcggcaagg tctacctgtg gacgggacga
     3061 gccactgaag ccttggcggc agcgcggcgt gcgttggagc tcagtccgct ctcgcccagc
     3121 gctaacgcgg agctggcccg ggggctgctt gccaatggac ggtgcgacga ggcgttggcc
     3181 cagctcgaga agatcgccgg gctcgagcct ccgctggcgc gggtgccggg gatcgcggcg
     3241 cagtgctacg cccagaaacg aatgttaccg gaggccatcg ccaccatccg gccgcaggcg
     3301 gacgagggtg ggacatctct cgggctgctg ggctacctgc tcgcccgggc cgggcaacgg
     3361 gaggaagcct cccggatcct cgccaagctc ttggaccaga agccgaccga gggcgaggcg
     3421 agttggccaa tcgctctggt ctacatcggc ctgagagatc tcgagcaggc cataccctgg
     3481 ctccaccgcg ccgttgatcg ccactcacta cacgcggcca ccgaaccacc cccacttgca
     3541 gccacggttc tcgaccccct ccgcgcggat ccgcgcatcg agcgcctcct ccagcgcatg
     3601 gccttgggcc ctcagaaccg gtaggctact ccgagctgga gctgaaacgc cgactcggcc
     3661 ggcagtattg tccaagggga ggcaacatcc tggaatcgga acaccggctg ttggttcccc
     3721 gtggggccgg tggtctggcc cacgtgctcc aggaactccg gcgcggccac ccggcgaatg
     3781 ccccagctgc cgttcaggag attgagcagg ttgaacacgt cgagctgggc ttctattcct
     3841 cgtcccacca ccggcactcg ctggcgaagc gagaccaccg aggtgtgcga ccagggctcg
     3901 cggcagctgt tccgctccat gatgcgtccc cgctggcgcc ggagacaggg cgagtcttca
     3961 atgaaccgct cgaaggccac cgcttgcgcc tggtcgctga acacgatctc gcccggatcg
     4021 gtggcgtccc gcggcacgta gatcggatcg ttggcggcgg agccgtcggc gttgaggtcc
     4081 cctaacgggc ggagcccgaa ggccagatag gtgaaggggc tccccgactc ccctacatat
     4141 aagaaggaca gctcggtggt ccagcgcggc cacggcgccc gccaggtgcc ggccaggatg
     4201 atccggtgag ggacgtcatt cagcgagact cctgcgctca ggtcctcgtg gcggcccgac
     4261 accgcgcggg aagaccagtt gaccaccccg cgggtgttca cccggagggg cgtctgcacg
     4321 tcccgcaccc gggaccacgt gtaggcggcc atcgccgcca ggccgccaga aaaccgcttc
     4381 tccagccggg cggagagctg gatcgaatag ttggccgaga cgctctgcag atcgatcacg
     4441 ctggggaaac tgcgggttcg gagggccggc gaggctcggc ccaatgcgtc gatggttccg
     4501 tagagtgtgc ggccatgctg gtcggcggac tgggggccca ccagattcag attgacgaag
     4561 atgaaatcgg acagattccg ggtgaacaac gcctccgccg tggccagcag gtcgccgggg
     4621 agtcgccggt cccaggcgag gacgccgcga agggtgcgcg ccatgcggag gcgtcggtcg
     4681 accagctcga catcacctgt cgggacgcca ttggatccgc cggcgcacgc cgtgggcggc
     4741 atgagcggat cgggctcgaa cgggggagca ggcccctgac tgccagcgct ccggccgcag
     4801 cgcaggatcc cggttccgaa gccgtagttc cggagcggcg tgtggaacca cgcgaggggc
     4861 ggtcgcccgg tgaagatccc cacacctcca cgcacctggt cgcggccggt gccgtcagga
     4921 ttccaggtga agccgaagcg cggcgacagg tgcacgtggg cgccgggcaa ttggtcggta
     4981 cgccggccga aaatggaatc gactgcccgg ttgtacgggg ggcgcccgtc gatgtcgagc
     5041 agatcggccc ggacgcccag ggtgagggac agccgcccac cgagcagcca atgatctccc
     5101 gcgtatgcgg agtactgcgc gcccgtgagc gggatactcc cgccgcccag atctcgcgcc
     5161 acttcgaagc gttcggcaag gcccgttgca agtgaatcga gactcaggaa gccccaggtt
     5221 ccgaagctgt tgagcagccc gcccggttcc acgcggaacc actccgcttc gatgccgaag
     5281 ctggcgacgt gggatcggcc gagtggcagg gtgaggttgt cgcgcaggtt gacgctccgg
     5341 gacctggtgt cacctccctg ggcctgcgtc ggtgtcccgg tgatgacgga gatcacacct
     5401 ccgccggtgg cgccggggac cgccacggtc acgatcggtt ggcgaacctc gggcaagctg
     5461 cgcaaccgcg tggaccggcg cgaaaggaag agctcgttgt ggcctccgcc tcggcgcggc
     5521 agcgcggtgt ggatctggag cgcccgggtc cgtatgccga gctcggaggt gctcgcctgg
     5581 ctggagagcg cgaaggtggt gtcccgggct agacgcgcga agctcagatt ctcgctctcg
     5641 gcgtcgctca gccagagtac ggcacggctg ctcacgttag ggatagcggc gtccagccgc
     5701 gcaaagacgt ttcgcagcgg gttccggttc tggaccgccc cgccggatcc cgccgtgagt
     5761 ccgtagctcc gcatgatcgt ctcgaggcgc gccagatcgg cctccctgac tggaaccggc
     5821 tgagtcatgt cggccggctg tcccacgtac ggccccgcca tcggttcggt cagccgctgg
     5881 aattccgtgg cgataaggaa atgaacccgg tccttggcaa tcggaccgga aagcgagaag
     5941 ccgaacaccc cacgctcgta cggcagcgtg tcgcctcggg ccagggcgtc attccggaat
     6001 tggccgaaga gcgatccccg gaactgattg gtgcccgacc gtgtcacggt attgaccgcg
     6061 gcgcccgcga agtcgccgta gcggacgtcg aagggggcca ggaggacctg gtactcaccc
     6121 acggcctcga acggcagcga cttcccgccg gcaaactcgg gaggctggcc ccccgcgagc
     6181 gatcgctccg gcaccccgtt ggtcaggaat tggttgaacc ggaatcccac gccgcccccc
     6241 gagataccgg cgaacccgag gccgatccgg gtcgagatct ggggcaccag cctgacgaaa
     6301 tcgtagagat cccggttcag gctgggcagg tggtggagca gggagtccgt gatagttgtg
     6361 gcggttcccc cgtggctgtt ggagcgggag aaccgacctg ccggaagaac caccaccagg
     6421 ctgtcgagct ggaccggagc cggctccagc accaggtgga gctcgtacgg ctctcccaga
     6481 gagagaaatc cgatgtcgcg ccgctccggc cgaaccccga tgcgacgtac ggtgatgtgg
     6541 tacggtccgc ctacctcgag accctggatg aagaaccgtc cgttccgcag gtcggcttcg
     6601 accacgaagc cggtcgccga gttgcgcacc gagactcgca cgccgctcgg gtcgctgccg
     6661 tcgccgatcc tgaccgtgcc tcgtacggcc gcggtcgtga ccccctgggt gagcgccgcc
     6721 gagcccgagc ttgccgctcc ggctcttggg aagccgagtg tcgtcaggac cagtgtggtc
     6781 cccacgacgt cgagcagcct ccagcgaggg gcaactctgt tcggcacggt gactcagcgg
     6841 ctgaagagag gcagcgctcc gtccaaatgt gtccgcgcgg aggccagagt caaccgattt
     6901 gccctcgagg tgataccacc caaacgcctg agagagaacg acctgggcgc gattaaccga
     6961 gcgttaactc ctcatagaca gggaattcat tctggcgggc tatcctggct ccgtgaacct
     7021 cactcgagca aggaggagtc catgtcaccc cgtagaacac gttcaaccat cgtggggctg
     7081 ttcgtcgcgg cactgtgggg attgggttgc tcgggcgtca ctacgcccga agcgccggcg
     7141 gaaaacgcgc ttgccgctca tcccggcatt cacgctgtga gtcagagcga agagaagggc
     7201 tacatcgacg gctggttcga cggcggcgag gtccagctct actatacgaa gtcctacttc
     7261 tgcgccgagc cgccgtcgag tggagcgcct tcggactgtg agatcggagc tccagctgaa
     7321 gtcgcccctc ggccgggtcc catcccgacc atctatgcca ttgccgccgt gggcttccag
     7381 ccggaccccg cgacggtggc gtgcctgcgg ggcagtccat gtctcaatca ccccgcgatg
     7441 atcgacgtct cgcgcaccgg cggtcctgtc gacgcccaag cgctctcgca tagccacatc
     7501 ctcgacgcgc gcggcggggg gtggttccac acggtgaaca tccgggtgtt cagcgcaacg
     7561 gcgtgggacg agatcgccgc cgccaagacc ctcgccaagg tgcgcgagct tcagggggac
     7621 aatccagccg ttggcgtacc tggcgtgatc agcgccgata cggataccaa catctacttc
     7681 ttcatcgccg gatggcggta gcggcgcaaa gcggtcaaga cggctcgatc gtgagggccg
     7741 gatgaatccg gcccctacag gaactgggcg gaccgggcgg gcgggatgaa tcccgcccct
     7801 acggtgcggc gtccatcttc ccttcctgag tacggtgcat ggctggcgac ggaagcatcc
     7861 ggactgtggc ccggccctca tcccaggagt aggttctcgt ccatgggtct cctggaaagg
     7921 ctgggtcttc gcaagccacc ccccgtcgct ctcgccggat ggctcggccg ccagctcgag
     7981 cggatcgtgc cgaccgacgg gagggccggg ccggggcccg atgaagcact ccgtatgctc
     8041 gacgcgttgg accagcgggt gtatcggttc caccgtaagt acgacatgca cacgctggtg
     8101 ctcgccatcg cgctctgggc cgctggcacg agcgacagag tggtgatggt ccatacgaag
     8161 ctcgtccgcc ggaccgacct tctcgccgtt accgtaaacg agctcggaaa gcggcgaaaa
     8221 ggatcgggga aggggttgat cctgcttcag caggcggtca aggacgcggg attcatggat
     8281 ggtcccaccc tgctcgaggg ccagtgagat gccggccccg atgggtgaac cacaggttcg
     8341 cgtccctcct cgcccagtag ccaccgttcg gacttaagac ccgtaggcgg gccggataaa
     8401 tccggcccct acatgaactc tggcggacgg gcgggcggga tgaatcccgc ccctacggtg
     8461 cgggttccat cttccagaac gcgatcccgc tcgcctgctg cccgacgtcc acggtgccca
     8521 ccttcacccg cgccgccagg tcgaacacat cgacctttcc cggctcggcc cggacaccct
     8581 cgctgctcac gaaggcgtag cgcgaatcgg ggctcaccac cacgccgtgg gtaaccgtgg
     8641 tcgaggtctt gagcgttgcg acactcgcgc cggtgcccag gtcgaacagc tcgaccgcgc
     8701 ccccctgctt gagcgtcgca accagatatc gcccatcggg tgagacggcc aggttgtaag
     8761 gcccccggcc ggtggcgaag cgccggctca cagcccagcc cgcgcggtcg atctccagga
     8821 cctcgtccga cttgttgcag gcgacgtaca ccttcttccc atccgacgag ggctgcgccc
     8881 aggtgggaga gcaggaattc ggcttcatcg gatggcgcat gccgcggtag cccacgtccg
     8941 ccggatccac ctccggcgcg ggccgcgggg gggcggggcg ggggctggcg tccgcgaggt
     9001 gccgtgccat ctcgccccgg tcgtcggccg ggagcgggcc ttccttcccc ttggccaccg
     9061 agaaacgccg ggagacctcg aagctcctgg tatcgatctc caccaactgg tcgtccatca
     9121 tgcagccgct gtaatggaac tgcccgctgg gctcgatccg gctgccgtgc ggcatggtgc
     9181 aggtgatgac gcggctcacc tcggtctggg tcggggtgta gatcaccgag tgcgacgagg
     9241 ggaccatgtc gccgtggagg ttgaagttcg ccgcgatggc gtagagcccg tcgggcgaga
     9301 tgtcgatgga cgccgggaag ttgccgagca gggtgccgcg tcccaccagc gtgtcgggac
     9361 cgagcgcgta gcgccagtac ttgccgtccg ggaacccgtg gccggtggtc aggtggaggt
     9421 acttgccatc ccgcgagatc gccaggccgt ggggaccttc catttcggcg gcgaactccc
     9481 ccaccggaat ggtcttctcg accacggcac ccccgggggg gggtccgaat cggacccgat
     9541 ggatcagatc ggccgactcg gctccgacgt agacccagta cgtggccttc gtcggctcgg
     9601 gggcggggcc ggcggcctga gccctcaacc tcccgacggt aagcagcaca cagaagagac
     9661 cacccaacaa cgccgcggca aacttgcgga ctcgagcagg ggtcaacatc gttcgttcct
     9721 tcgaggtatc atcaaccaga ggtaagtcct gggccggttt cgtccggtcg ggttcccgat
     9781 cgctcaccca tgtggaacat ctcgccatga agctaattcc ttcggtgcac gtttccatcc
     9841 gaatagcgct gctctcgtgc ctggcggccc cgctggcgcc ggagctccag gctcaagctc
     9901 agcaagccgt ggccagactc acggcagagc cgagctcgct tcggctcagg gtgggcgact
     9961 cggcgcggat cacggtgaag gcctacgacg cccagggccg cgagatcccc gacgcccaga
    10021 tccgggtgtt cggcgctcgc cggacggtgg gctaccagga tggcctggtt cgcgcattcc
    10081 gggccggcaa cttcacgctc accgcggcgg cgccaggggc agacgcggtt cccgtgatgc
    10141 tggagatccc ggtgacggcc acctggccgg ccatcgcgaa gctcgagatc gttccggccc
    10201 cggggggggg cccgctttac accggggtca cgctggccca ctcggccaag ggctacctgg
    10261 cggacgggac cgagcgggtc gacctgaagc ccacctggcg gagctcgaac gac
//
LOCUS       DASWKS010000618         6048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2215322, whole genome shotgun sequence.
ACCESSION   DASWKS010000618 DASWKS010000000
VERSION     DASWKS010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2215322"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VGA78_17630"
     CDS             complement(<1..757)
                     /locus_tag="VGA78_17630"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895757.1"
                     /translation="MKRPIVLLLLCLLSAGPVSAQAATADSLEIERVVGLLGARLDTL
                     LTRYQEYGFWGSVLVAQRGKVVLLKGYGLADLERKVSNSAATRFEMNSITKTFTAAAI
                     LKLAAEGRLAVTDPVERHLGSFRADKRSATIEDLATHTAGLVVGGATLATESLVAFVE
                     SVKRTPRESPPGQEYRYTNAGFSLLAAVIEKVTDDSYENYLRRNLFPAAVMRSAGFRD
                     EVPVGDARFARGYVGTPAGLAPGPAKPHGWSTRG"
     gene            1034..1687
                     /locus_tag="VGA78_17635"
     CDS             1034..1687
                     /locus_tag="VGA78_17635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895758.1"
                     /translation="MLAVCLVAPTAAAQRHEYFTFDPTLERWVNGAADPTGDLRRAVF
                     DSPWQDGRRSVAIERLVERLASLRAAGADIRLVAYSADSARSGQLRDEGMAATLARAM
                     ADTTRIGVVLSGNLHNRLRAGTAISADYRPAAFEVAKRLGSARVRSLDMSYDAGTAWT
                     CTGPRPADCAMRKVGARHPVPRWTIQLGDSLDSEGYHGRYGVGAVTAAGPAIHRGGS"
     gene            1744..1941
                     /locus_tag="VGA78_17640"
     CDS             1744..1941
                     /locus_tag="VGA78_17640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895759.1"
                     /translation="MRVFLVYDRRTGEPVSTFEEPDDNLTTGEFTAVHVPPDRRERWA
                     VVEVTTGKAPARRPRKTRKQS"
     gene            1963..3504
                     /locus_tag="VGA78_17645"
     CDS             1963..3504
                     /locus_tag="VGA78_17645"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004816.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9895760.1"
                     /translation="MRRRTFVGALSAGIGLPLVAARRRLVPPVPADLSYASATEAAGA
                     IRAKQISSLELTQLAFERIDRFNPRLNALVNLLREPALARAREADAAWSRGTWWGPLH
                     GVPVTVKESFGIAGTAATAGAPFLKNHVPAEDSVPVARLKQAGAVLIGNTNVPFMLGD
                     WQSYNEIYGTSNNPWDPTRTPGGSSGGTAAALATGLGHLSIGSDIGGSIRVPAHFCGI
                     YGHKPTVGVVPMRGHIPPLPGEQGTPIVSLPVGGPMARSAADLRMALEVLGGPDQPDA
                     KAYRWTLPPARHRALRDFRIGVVLDDPSCPVSAEVKPVFDGLLAALRRSGASLTQGWP
                     EGINPRADYHTYVYLLGTYFASQLPDSALDATRRAASRPDSSIGTIWNRAWTDPVKRV
                     QQQTAARERARSLWSRWFQNHDVCLMPVAFVPAFPHDHSPDPTRRVLATPAGSRSYMD
                     LMWWIAAATLSGLPATVAPLGLTSGGLPVGIQIVGPYLEDATPIAFAEALAREIGGFR
                     PPPGF"
     gene            3799..>6048
                     /locus_tag="VGA78_17650"
     CDS             3799..>6048
                     /locus_tag="VGA78_17650"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX9895761.1"
                     /translation="MRVRLRHDQLQRLLANSPLSQNHWALKLGFSRGHWSEIVNGRHP
                     YPSARTRERILEVFGVAFDILFAIEDAAPAGDEIDFRLALSGRYSLLGELGQGGMGTV
                     YLAMDRRQGRQVALKVVNPEAAGGIGIPELLKEIALVGRLQHPNILPLFESGEDAGYP
                     WFVMPYVRGGSLRDLLRSSGGRLALADALPFIAGISAALDHAHGERILHCDVKPENVL
                     LHGRHAWVVDFGIARKLHTEAEEWRPLRKELDFSAGTPAYVSPEQASGEQELDARSDV
                     YSLGCVVYEILAGRPPFEGGTTREVVTRRFRAAAPDLRAWAPELPTAAADVIARAMAF
                     DRSARPASAGVFAFALQQAAAGETRLAGLHRGLERSLGRARRRAGLQPSQPIGRFLAG
                     AGKDLIYAFRSLRRTPTVTVAAIACLALGLGATTAIFSAVYTALLRPLPFFEPERLVS
                     VFRTTPFFETGPFSPGTYLDLARAPRSLEGVAAARPSVSLMEGTGEPRRVTTYRASDN
                     LFQVLGVPAVQGRVFRPGDGDGAAPETVLLGEELWRTHFGADPAVIGGTIRLDAEVHT
                     VVGVVPAGFRLPHGGQSLASDVWTTLRFTPDEASQRRNNSIWLVGRLKPGIRVESADA
                     ELRTQMEGIIASSPELRGEQLRVVPLHRESTQSVRGPLLLLLGAVGFVLLIAVSNVAS
                     LLLARGVERRREVAVRTALGASPGVVIRRALLESAVLAGAGVVLGVALAGVGVKLIGV
                     MAAARLPQLI"
BASE COUNT          939 a         2029 c         2061 g         1019 t
ORIGIN      
        1 cgccgcgggt gctccaccca tggggcttgg ccgggccggg agccaggcca gcgggcgttc
       61 ctacgtagcc gcgggcgaac cgggcatccc ccactggcac ctcgtcccgg aagccggcac
      121 tccgcatgac cgcggcggga aacagattgc gccggaggta gttctcgtac gaatcgtctg
      181 tcactttttc gatgaccgca gcaagcaagc tgaagccggc attggtgtag cggtactcct
      241 gtcctggcgg ggactcccgc ggcgtccgct tcacgctctc gacgaatgca accagggatt
      301 ccgtggcgag cgtggcaccg cccacgacca gaccggcggt gtgggtcgcg agatcctcga
      361 ttgtcgccga ccgcttgtcc gcccggaaag agccgagatg tcgctccacc ggatcggtga
      421 ctgctagccg gccctccgcg gcgagcttga ggatggccgc ggcggtgaac gtcttggtga
      481 tcgagttcat ctcgaagcga gtcgcggcgc tgttgctgac cttccgctcc aggtcggcca
      541 ggccatagcc cttgagcagg accaccttcc cccgttgcgc caccagcacg ctgccccaga
      601 acccatactc ctggtagcgg gtgagcagcg tgtcgagccg cgcacccagc aggccgacca
      661 ctcgctcaat ctcgagcgaa tcggcagttg ccgcctgggc cgagaccggg ccagccgaaa
      721 ggaggcacag caacaggagc acgatcgggc gtttcattcc tcgctcccca tgaggcgcgc
      781 ccggtaggcg catcagctgg gcaaaaggaa accggcaaac cgaacgatgc ctgttggtgg
      841 gaccctggag caatagctga agctcgactg ggcgggctct ccgcatcgag gaccgcgagg
      901 tgcgaagacc gtgcggcctc gcgcttcaca ggcgcgtata ttgggattcg ctggcaggcg
      961 agctcgggcg ccaggcgggc atctcggagg aacatcgatg tttacggcag cggcccctcg
     1021 tatgacagcc agagtgctag cagtctgcct ggtcgcaccg acggctgccg cgcagcgcca
     1081 cgagtatttc actttcgacc cgaccctcga gcggtgggtc aacggcgccg ccgatccgac
     1141 cggagacctt cggcgcgcgg tcttcgattc accgtggcag gacggccgcc ggagcgtcgc
     1201 catcgaacgg ttggtcgagc ggctggcctc gctgcgcgcc gccggcgccg acatccggct
     1261 ggtcgcctac tcggctgaca gcgcgcggag cggacagctg cgcgatgaag ggatggcggc
     1321 gacactcgcg cgggcgatgg ccgacaccac ccgaatcggt gtggtgctgt ccgggaacct
     1381 gcacaaccgc ctccgcgccg ggaccgcgat tagcgcggac taccgaccgg ccgccttcga
     1441 ggtcgcgaaa cggctcgggt ctgctcgggt tcgaagcctc gatatgagtt acgacgcggg
     1501 caccgcatgg acctgtaccg gcccgaggcc cgctgactgt gccatgcgaa aggtgggagc
     1561 gcgccacccg gtgccgcgct ggacgattca gctgggcgac tcgctcgaca gcgaaggcta
     1621 tcacggacgc tacggtgtgg gcgcggtaac cgcggcgggt ccggcaattc accgcggtgg
     1681 gtcttgacaa ggctgcatcc ggggcgatgt tcgtcccttc cccctagcca cgggattcgc
     1741 cccatgcggg tgttcctggt gtacgatcgc cgaaccggcg agccggtatc gacgttcgaa
     1801 gagcccgatg acaatctgac aaccggcgag tttaccgcgg ttcacgttcc gccggaccgg
     1861 cgtgaacgct gggcggtcgt cgaggtcacc accgggaaag cgcctgcccg ccgtccccga
     1921 aagacccgca agcagagctg atagtttcaa aaggaggacc ccatgcgccg gcgtaccttt
     1981 gtcggggcac tgagcgcggg aatcggtctg ccgttggtgg cggcgcggcg gcggctcgtg
     2041 ccccccgttc ccgcggacct gtcctacgcc agcgccacgg aagccgccgg cgccatccgg
     2101 gcgaaacaga tctcttcgct cgagctcacc cagctggcat tcgaacggat cgaccgattc
     2161 aatccccggc tcaatgccct cgtcaacctg ctgcgagagc cggcgctcgc ccgggcgcgg
     2221 gaagcggacg cggcctggag ccgcgggacc tggtggggcc cgctccacgg cgtcccggtc
     2281 acggtgaagg aatcattcgg catcgcgggc acagccgcca ccgctggcgc accgtttctc
     2341 aagaatcacg taccggccga ggactcggtt ccggtggcgc ggctcaaaca ggccggagcg
     2401 gtgctgatcg gcaacaccaa cgtgccgttc atgctgggcg actggcagag ctacaacgag
     2461 atctacggca ccagcaacaa tccctgggac ccgacccgta cgccgggcgg ctcgagcggc
     2521 ggaaccgcgg ccgcgctcgc caccggcctg ggacatctct cgatcggcag cgacatcggc
     2581 gggtcgattc gagtcccggc ccatttctgc gggatctacg gccacaagcc gaccgtcggc
     2641 gtggtcccga tgcggggcca catcccgccg ctgccgggag agcaaggcac gccgatcgtg
     2701 agtctcccgg tcggcggtcc catggctcga agcgctgccg atctgcggat ggcgctggaa
     2761 gtgctgggcg gaccggacca gcccgacgcc aaggcatacc gctggactct gcccccggcc
     2821 cgacaccgcg cgttgcgtga cttcaggatc ggggtggtgc tggacgatcc ctcctgcccc
     2881 gtctccgccg aggtcaaacc ggtgttcgac ggattgttgg ccgcgctgcg acgttcggga
     2941 gcgagtctta cgcaaggatg gcccgagggg atcaacccga gggctgacta ccatacctac
     3001 gtctatctgc tgggaaccta ctttgcgagc cagctgcccg attccgcgct ggacgcgacc
     3061 cggcgagcgg cctcgcggcc ggattccagc atcggcacca tctggaaccg ggcctggacc
     3121 gatcccgtca agcgagtcca gcagcagacg gcggcgcggg aacgggcccg aagtttgtgg
     3181 agtcgctggt tccagaacca cgacgtttgc ctgatgccgg tcgcgtttgt tcccgcgttc
     3241 ccgcacgatc acagccccga tccgacccgt cgggtcctgg cgacccccgc cggctcccgt
     3301 tcctacatgg atttgatgtg gtggatcgcc gcggccacgt tgagcggttt gccggccacg
     3361 gtcgcgccgt taggcctgac cagcgggggc ctgccggtgg ggattcagat cgtcgggccg
     3421 tacctggagg atgccacgcc catcgcgttc gcggaggccc tggctcggga aatcggcggg
     3481 ttccgccctc ccccgggatt ctgacagcag gactgaggac ttgggactaa ggactaggca
     3541 agggatgaca gtccgagagg cacttagacc tgagtcctta gtcctgagcg tcggttcgtc
     3601 atcggcgtga tctgcggatg aatcgttcgg atatctgata gcggcgatcg tttcaatccc
     3661 ggacggcatc cggcgttggg ggatgcgccg accatgatcg aacgatgacg aacactttct
     3721 gcaccaccga ccctcctggc tcccttccct ttacgcatct tgtgcatcta acagcccacc
     3781 attccgggtg agatcaacgt gcgcgttcgc ctcaggcacg accagctcca gcgactcctt
     3841 gccaacagcc cgctgagcca gaaccactgg gctctgaagc tgggcttttc ccgaggccat
     3901 tggtcggaga tcgtgaacgg gaggcatccc tatccctcgg cccgaacccg ggagcggatc
     3961 ctggaagtat ttggggtcgc cttcgacatc ctgtttgcca ttgaagatgc ggccccggca
     4021 ggggacgaga tcgatttccg gctggcgctg agcggtcggt actcactgct cggcgagctg
     4081 ggtcagggcg gcatggggac ggtctacctg gcgatggacc ggcgccaggg tcggcaggtc
     4141 gccctcaagg tggtcaaccc ggaggcggcc ggaggcatcg gaattcccga gctgctcaag
     4201 gagatcgcgt tggtgggccg gctgcaacat cccaacatcc tgccgttgtt cgagtccggg
     4261 gaagacgccg gctacccctg gttcgtgatg ccgtacgtac ggggcggttc gttgcgcgat
     4321 cttctccgaa gcagcggtgg ccgcctggcc ctggcggatg cgctcccatt catcgcggga
     4381 atatccgcgg cgctcgacca tgcccacgga gaacggatcc tccactgcga cgtgaaaccg
     4441 gaaaacgtgt tgctgcacgg ccggcacgcc tgggtcgtgg acttcggcat cgcccggaag
     4501 ctgcacaccg aagcggaaga atggcgtccc ctccgaaagg agctcgattt ctccgccgga
     4561 accccggcct atgtcagtcc ggagcaggcc agtggagaac aggaactgga cgctcgttcc
     4621 gacgtctaca gtctcggctg cgtggtgtat gagatcctgg cgggacgccc ccccttcgag
     4681 ggcggcacca cccgggaggt ggtgactcgg cgtttccggg cagccgcgcc cgatctcagg
     4741 gcctgggcgc cggagctgcc cactgccgcc gcggacgtca tcgcccgcgc gatggcgttc
     4801 gatcgttcgg cgcgtccggc ctccgccggg gtgttcgcct tcgcgctgca gcaggccgcc
     4861 gccggcgaaa cccggctggc ggggcttcac cggggcctgg agcgaagtct ggggcgcgcc
     4921 cggcgccggg ccgggcttca gccgagtcag ccgatcggtc ggttcctggc gggggctgga
     4981 aaagacctga tctacgcctt ccgaagcctc aggcgcactc cgaccgtcac cgtcgcggcc
     5041 atcgcgtgtc tggcgctcgg cctcggcgcc accaccgcga tcttcagcgc ggtctacacc
     5101 gccttgttgc ggccactccc gttcttcgaa ccggaacgtc tggtctccgt gttccgaacc
     5161 acacccttct tcgagaccgg tccgttctca cctggcactt acctggatct ggcgcgcgcg
     5221 ccgcgttcgc ttgaaggcgt ggccgcagcg agaccctcgg tgtcgttgat ggagggaacc
     5281 ggagagccgc gtcgggtgac gacctaccgc gcctctgaca acctcttcca ggtactgggc
     5341 gtgccggcgg tgcagggtcg cgtcttccgg cccggcgatg gggacggggc tgctcccgaa
     5401 accgtgttgc tgggcgagga gctgtggcgc acccatttcg gcgcggatcc ggccgtgatc
     5461 ggcggcacga tccggctcga cgccgaggtt cataccgtgg tgggcgtggt gcccgcgggg
     5521 ttccggctgc cccatggtgg gcaatccctt gcgtcggacg tgtggaccac gcttcggttc
     5581 actcccgacg aggcctcgca gcgccggaac aactccatct ggctggttgg gcgactcaag
     5641 cccgggatcc gggtggaatc ggccgacgcc gagcttcgga cccagatgga agggattatc
     5701 gcgtccagtc cggagcttcg cggcgagcag ctgcgggtgg taccgctcca ccgtgagtcc
     5761 acccaatcgg tgcgcgggcc cctgttgctc ttgctgggcg cggtcggctt cgtgctgctc
     5821 atcgccgtgt cgaatgtggc gagcctgctc ctggcccgcg gcgtagagcg gcggcgtgaa
     5881 gtggcggtgc ggaccgcgct gggtgccagc cctggcgtgg tcattcggcg cgccttgctc
     5941 gagagcgcgg tgctcgccgg cgccggtgtg gtcctcggtg tcgccctcgc cggagtcggc
     6001 gtgaagctca tcggggtgat ggcggccgcc cggttgccgc agctcatc
//
LOCUS       DASWKS010000619         4087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3299023, whole genome shotgun sequence.
ACCESSION   DASWKS010000619 DASWKS010000000
VERSION     DASWKS010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3299023"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VGA78_17655"
     CDS             <1..761
                     /locus_tag="VGA78_17655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX9895762.1"
                     /translation="MSYDMHAVLECFLDDGRIEEFQPELAKEMICGHAHVEGWPVAVI
                     ANRRGVVKGQPGTRPRFGGIIYTESARKVAYFIETANRERLPILFVQDVSGFMVGPEA
                     EESGIIRAGAEFVEAMATAVVPKIVLTLNHASGAGYYAMAGQGFDPDFILSWPTGRMG
                     VMEGDSAVAAVHGTELERAKKEKRKVSEETEAAMDTMREDYEHQLDARHAAARGQVDT
                     IITPEETRDMLAFLLRVSANYAGPHLGPFVLPAL"
     gene            758..3532
                     /locus_tag="VGA78_17660"
     CDS             758..3532
                     /locus_tag="VGA78_17660"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX9895763.1"
                     /translation="MTVGRTGGQAGGSSGVRVCLSVVFVLLAAGCAGANPPSVRPAVR
                     RPATDSAPAPIAPPAQAAQLGWMPLAGTNVPGFARAFPQYDGRGVLIAVLDGGIDPGV
                     RGLDRLPDGKPKILDLRDFSAEGRVVLSPAELTSDVVRAGPVRLRGAGRIRGLHSGGP
                     IYGGALHELALGEPPAADLNGNGVVGDTLPVFVARATDGWIVLLDTDGDGSLENERPL
                     RDYLLGRDTFGWKTGGRPAPVTLAINLEDRGAGVAPLLDLYFDTSGHGTHVAGIAAGN
                     DLYGVAGFDGVAPGAQLLGLKIANDARGGITVTGSMVRALDYAIRFAAQHRLPLVINL
                     SFGVGNEAEGRARIDGMVDSILAAHPDVVLTLSAGNDGPGLSTMGFPASARRAITVGA
                     TYPGAFLPPSSEGRRRPDLVAFFSARGGELAQPDLVAPGVAYSSVPPFQTGEEVKNGT
                     SMAAPHVAGLVTRLWSGLVALGRSAEAAALRRALMAASRPLAGNTWLDQGAGQPDLVE
                     AWGLIGPSLRAISVTVDAQRGVSAAMYPEGLRDSVGHFTLRASGRHEFRLVSDALWIQ
                     PPARVEIADSAAVALRYRGERLREPGVYVGTVEGLGADSALGPSFRLITTVVVPRPLP
                     ADRERVPLRVPEGQLRRIPILADSGRGVRIQVGDPRGAPLLAFLFEPGGMPWRGGGAQ
                     AAGAEDSVALFELDARDVRRGVYELVVMAGPALPVDAVVLIDPAPIRLAAERRKQVVT
                     LRTSPVREVAATVSGEVIGAERGIVTSSRGSEDRRLSFALPSWARRAVIELHLERDQW
                     PLFTDFGLTLLDADGRQIAASPMNYAVGRLETDLPAGPDRTAEVVLSPGFAEPGADHR
                     WNGRLAIRLYAEQPVTLGDNLGAQFSLPPSPWPLGDGFFPLVRFTARSGDRLWIRETG
                     LPEVPGPLMP"
     gene            3529..>4087
                     /locus_tag="VGA78_17665"
     CDS             3529..>4087
                     /locus_tag="VGA78_17665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX9895764.1"
                     /translation="MTRPKLVRVAAGQGFWGDWLEAPVRQVKGGKIDYLMMDYLAEVT
                     MSIMQKQRTRDPKAGYARDFIPLMERILPDVAAKGIRVVTNAGGVNPRGCAEAVLAVA
                     RKLGLAGKLRVGLVVGDDILDRLDELIAKGHPLNDLDTGRPLSEVRSQVLSANAYLGM
                     SPVVLALQQGAQVVVTGRVTDTGLTL"
BASE COUNT          572 a         1391 c         1453 g          671 t
ORIGIN      
        1 gcatgtccta tgacatgcac gcggtgctcg agtgctttct ggatgatgga cggatcgaag
       61 agttccagcc cgagctcgcc aaggagatga tctgcggtca cgcccacgtc gagggctggc
      121 cggtcgcggt gatcgccaac cggcgcggcg tggtgaaggg acagccggga acccggcccc
      181 gcttcggcgg gatcatctac accgagagcg cccgcaaggt ggcctacttc atcgaaaccg
      241 ccaaccggga gcggctcccc attctcttcg ttcaggatgt gagcggcttc atggtgggac
      301 ccgaagccga ggaatcgggg atcatccggg cgggcgccga gtttgtcgaa gcgatggcga
      361 cggcggtggt tcccaagatc gtgctgactt tgaaccacgc ctcgggagcc ggctactacg
      421 cgatggccgg ccagggcttc gatcccgact tcatcctctc ctggcccacc ggccggatgg
      481 gagtgatgga aggggactcg gccgtcgccg cggttcacgg gaccgagctg gaacgggcca
      541 agaaggagaa gcggaaggtc tccgaggaga ccgaagccgc gatggacacg atgcgggaag
      601 actacgagca ccagctcgac gcccgccacg cggccgcccg gggccaggtc gacaccatca
      661 tcaccccgga agagacccgc gatatgctgg cgtttctgct ccgggtctcc gccaactacg
      721 ctgggccgca tctcgggccc tttgtgctgc cggctctatg acggtcgggc ggacgggcgg
      781 gcaggcgggc ggtagttccg gcgtccgcgt ctgcctttca gtcgtcttcg tccttcttgc
      841 cgccgggtgc gccggtgcca accccccgtc cgtccgcccg gcggtccgcc ggcccgccac
      901 cgattccgcc ccggctccga ttgcgccccc ggcccaggcc gcccagttag gctggatgcc
      961 cctggccggg accaacgttc ccggctttgc ccgggccttc ccccagtacg atggccgggg
     1021 ggtgttgatc gccgtgctgg atgggggaat cgatcccggg gttcgcggtc tcgaccggtt
     1081 gcccgatggc aagcccaaga ttctcgacct gcgcgatttc tcggctgagg gccgggtagt
     1141 cctgtcgccc gccgagttga cgagtgatgt ggttcgggcc ggcccggtcc ggctgcgcgg
     1201 tgccggacgg atccgggggt tgcacagcgg cggccccatc tacggcggcg cgctgcacga
     1261 gctcgcgctg ggcgagccgc ccgcggccga tctcaacggc aacggagtcg tgggcgacac
     1321 cctcccggtc ttcgtggccc gggccaccga cggctggatc gtgctgctgg ataccgacgg
     1381 ggacggctcg ctcgagaacg agcgtcccct gcgcgactat ctcctgggcc gggacacctt
     1441 cggctggaag accgggggcc gcccagcgcc ggtgaccctg gcgatcaatc tcgaggatcg
     1501 cggcgccggc gtcgcgccgc tgctcgacct gtacttcgac accagcggtc acggtaccca
     1561 cgtcgcgggg atcgcggcgg ggaacgacct ttacggtgtc gccggcttcg acggcgtggc
     1621 ccccggtgcc cagctgttag gcttgaagat cgccaacgac gcccgaggcg gtatcaccgt
     1681 caccgggtcg atggtccggg ccctggacta cgcgatccga ttcgccgcgc agcaccgcct
     1741 gccgctggtg atcaatctga gcttcggagt gggcaacgaa gccgaaggtc gggcccgcat
     1801 cgatggcatg gtcgactcga tcctcgccgc ccatcccgat gtggtcctga ccctgagcgc
     1861 gggtaacgac ggtccgggcc tgtccaccat gggcttcccg gcctccgccc gtcgggccat
     1921 caccgtggga gccacctatc ccggtgcgtt tctcccgccc tcgtccgagg gtcgccgccg
     1981 gcccgatctg gtggcgttct tcagcgcccg ggggggagag ctggctcagc cggatctggt
     2041 cgcacccggc gtggcctatt ccagcgttcc tccctttcag accggcgagg aagtgaagaa
     2101 cggaaccagt atggcggccc cgcacgtcgc cgggcttgtg acccggctct ggtcggggct
     2161 ggtcgccctg ggccggtcgg ccgaagccgc ggccctgcga cgggccctca tggctgcgag
     2221 ccgtccgctg gcggggaaca cctggctgga tcagggcgcg ggccagccgg atctggtcga
     2281 agcctggggg ctcatcggac ccagtctccg cgcgatctcc gtgacggtcg acgcccaacg
     2341 gggggtgtcg gcggcgatgt atccggaggg cctgcgggat tcggtgggcc atttcaccct
     2401 gcgcgcgtct ggcaggcacg agtttcgact ggtcagcgat gcactttgga tccagccgcc
     2461 ggcccgggtc gagatcgccg acagcgcggc cgtcgcgctc cgctatcgcg gcgaacggct
     2521 gcgcgagccc ggcgtatatg tcggcacggt tgaaggcttg ggcgccgaca gcgccctggg
     2581 accatcgttc cggctgatca cgaccgtggt ggtgcctcgg cctctcccgg ccgaccggga
     2641 acgggtgccg ctgcgcgtgc ccgaagggca actgcgccgg attcccatcc tggcggacag
     2701 cggccgcggc gtccggatcc aggtgggcga tccccgaggc gcgcccttgc tcgccttcct
     2761 gttcgagccc ggcgggatgc cgtggcgggg cggaggcgcg caggccgccg gggccgagga
     2821 ttcggtcgca ctcttcgagc tcgatgcccg cgatgtgcgg cgcggcgtct acgagctggt
     2881 ggtgatggct gggccggcgc ttccggtcga tgcggtggtg ctgatcgatc cggcgcccat
     2941 ccggctcgcg gccgagcggc gcaaacaggt cgtcacgctg cggaccagcc cggtgcgcga
     3001 ggtcgccgcg accgtctccg gcgaagtaat cggggcggag cgagggatcg tgacctcatc
     3061 gcgcgggtcg gaggatcgcc ggctcagctt cgccctgccg tcctgggccc ggcgcgccgt
     3121 catcgagctc catctcgaac gggatcagtg gcccctcttc accgatttcg gattgacgct
     3181 gctcgatgcc gatggccgcc agatcgcggc atcacccatg aattacgcgg tgggacgact
     3241 tgagaccgat ctgccggcgg gaccggatcg gacagccgag gtagtactca gccccggctt
     3301 cgccgagccg ggagccgatc atcgctggaa cggccggctg gcgatccggc tctacgccga
     3361 acaaccggtg acgctgggcg acaatctggg cgcgcaattc tccttgccgc catccccctg
     3421 gccgttaggc gacggcttct tcccgctggt ccgcttcacc gcccgctcgg gcgatcggct
     3481 gtggattcgc gaaaccggtc tccccgaggt ccccgggccg ttgatgccat gacccgaccc
     3541 aagctggttc gcgttgccgc cgggcaggga ttctggggcg actggctgga agccccggtc
     3601 cgccaggtga aaggcgggaa gatcgactac ctgatgatgg actacctggc tgaagtcacc
     3661 atgtccatca tgcagaagca gcggacccgc gatcccaagg cggggtacgc ccgggatttc
     3721 attcccctga tggagcggat tctgcccgac gtcgccgcca agggcatccg ggtcgtcacc
     3781 aacgcgggtg gagtcaatcc ccgcggctgc gccgaggcgg tgctggccgt ggcccggaag
     3841 ctggggctgg cggggaagct ccgggtgggc ctggtggtgg gtgatgacat cctggaccgg
     3901 ctggatgagc tgatcgcgaa gggccacccg ctcaacgatc tcgataccgg ccgcccgctc
     3961 agcgaggtcc gctcccaggt gctgtcggct aacgcttatc tcggcatgag ccccgtggtg
     4021 ctcgcactgc agcaaggcgc ccaggtggtc gtgaccggcc gggtgaccga caccgggctt
     4081 acgctgg
//
LOCUS       DASWKS010000620         9924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2559870, whole genome shotgun sequence.
ACCESSION   DASWKS010000620 DASWKS010000000
VERSION     DASWKS010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9924
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2559870"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1517)
                     /locus_tag="VGA78_17670"
     CDS             complement(<1..1517)
                     /locus_tag="VGA78_17670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895765.1"
                     /translation="MTIVAGMRYKSGGPLGWLTRWVFGARHRELWGTPVRVEAIVPER
                     WRGGITLLGADTGLRMGYLYYRDSVGETWTFRAMDRDLTALMPDRFRRAAMSGFFQDL
                     YSARHPGAPLVWPTLARAAGVGVTSERLVAMMTGSAPSPGFLEHGVETRFRQELDDPG
                     VAVPTSALLETLASPGAQAVDTVSYLRERLFDLYVGAWDPLPQEWLWAERGGIFTPLP
                     RDRDGAFSRFDGLVASLAATGWAELAEFGEDYTGKLPVTARTRVLDRHLLTGLDRSRW
                     IPVALELRARLTDSVIEAAVDHLPPEYRARNGAELAAKLRLRRDGLPEAAQRFRLLVV
                     EDADVYGTTGSDSVSVEFSVDSVMRMRIAGRFDQSFHAAETNLVRLYLRGGDDVVLIR
                     GSGVFAPMLHLAGPAGVTIMDSSLARRLQVSRDLSPPELVDAAEAPLVRGSRFNAIPW
                     LGFNSDQGLLVGGGVVQTTYDPDWDPWRRLIRLRAAYATAPSAFGVELRGEFRFRS"
     gene            1696..2580
                     /locus_tag="VGA78_17675"
     CDS             1696..2580
                     /locus_tag="VGA78_17675"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HEX9895766.1"
                     /translation="MRLLRPLAVLALVLPCTLTAQTRPVRVFISVDMEGIGGIGTGAM
                     TSSNGKDYSTGRELMTAEVNAVVEAIFARGAAQVLVNDSHGDMQNLLHTRLDPRVQYI
                     QGAVKPYGMTQGLDSTYDAVVFVGYHAMARSEDGFLAHTGSGTVQGLWINGTEVGEGG
                     LNAYLAGSVGVPVVVAAGDSTFTREIRLLLPTVRTVATKLAVGGQVARLDHPDLVRAK
                     LRDAVTAALADLRSFRPLRPTEPVTVRLRFDTTTRADIVEVIPGVRRVDGTTIEFSAP
                     TMRQAYPMVRLMYRYVSW"
     gene            complement(2687..4117)
                     /locus_tag="VGA78_17680"
     CDS             complement(2687..4117)
                     /locus_tag="VGA78_17680"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9895767.1"
                     /translation="MRNIGTIWLILMGGAAALSAQSRPGTDAMLAALDARSGAYTGVA
                     RRIWEFAEVGYQETRSSALLQEQLRGAGFTVEAGVADIPTAFVASWGQGSPVIGIVGE
                     FDALPGLSQDATPMRKILIEGGPGHGCGHHLFGTASTAAAIAVKEWLQQSGRAGTVKF
                     FGTPAEEGGGAKVYMIRAGLFRGIDAVVTWHPGDVNQVTKATTLANMSAKFRFRGVSA
                     HAAAAPEQGRSALDGVEAMNSMVNLMREHVPQETRIHYIITAGGKAPNVVPDFAEVYY
                     YARHSDMRLLDGIWERVTNAAKGAALGTGTTMDFELVNAVYNVLANDYLADLMERQLK
                     RVGGITYTPEEQHFAEQLRPSLAGTVPAPGTEAKILAPEVGVSSGSTDMGDVSWVVPT
                     VQMSAATWVPGTPAHSWQAVAAGGMSIGAKGMMVAAKTMALTAVELFSDPSHLTRARA
                     EFDRRVGGHQYRAMVGDRKPPLDYRN"
     gene            complement(4383..5876)
                     /locus_tag="VGA78_17685"
     CDS             complement(4383..5876)
                     /locus_tag="VGA78_17685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9895768.1"
                     /translation="MPGFQEYTAYDAVGLAELVRRGEVSPRELVDECIARIERLNPRL
                     NAVIHPMFERARRDADAGLPDGPFRGVPLLIKDLVALVAGEPMRAGSRFLRGFVPDHD
                     TELVARYRAAGLVIVGKTNTPELGLVPFTEPELFGPTNNPWDPRRIAGGSSGGSAAAV
                     ASGMVPVAGGGDGGGSIRIPASCCGIFGLKPTRGRTPLGPDRGELWQGCVVEHVLSRS
                     VRDSAALLDATAGGDVGAPYFMPRPDRPYRDEVGSEPGPLRIAFTTRPWLGRQVHDDC
                     VRAVHRTVELLRSLGHQVEEAEPDFDGKAFARNFMVMVAGECRGDIEEAERLVGRKAG
                     PADFEGETWALGLLGRTLSAAEFVTATRLLQMDARRIGRFSAEWDALLTPTVALPPPP
                     TGSLQPTPRDRLILKTLGRVGAGRVLEMMGMLDEAAANAFEFTPWSPVANVTGQPAMS
                     VPLEWNAEGLPIGVHFTGRFGDEATLFRLAGQLERARPWFDRRPPVS"
     gene            complement(5935..6294)
                     /locus_tag="VGA78_17690"
     CDS             complement(5935..6294)
                     /locus_tag="VGA78_17690"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HEX9895769.1"
                     /translation="MARNRSKLVEDGRRQSKKVTSHARILETVRRIPKGRVATYGQVA
                     KLAGFHRQPRLAGYALRHAGEDVPWHRVINARGEISPRAASDSVTHQRALLKAEGVRL
                     ESAGRIDLKRYQWRPRR"
     gene            6293..6784
                     /locus_tag="VGA78_17695"
     CDS             6293..6784
                     /locus_tag="VGA78_17695"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9895770.1"
                     /translation="MADPFVQWYGHKLWAHDLYCQEIATLTPERFTQDTWSSYPSIRD
                     TMVHIFSADGRWLDRFRGEPPRAALQPADYPYLEDIRATWREIEEAQLAFVRQLSLGM
                     AATITMPAENGQDSHVIPAWVPLYHAAHHAGYHRGQLATMLRQLGHRPPTTDFLDYLV
                     ATR"
     gene            complement(6774..8729)
                     /locus_tag="VGA78_17700"
     CDS             complement(6774..8729)
                     /locus_tag="VGA78_17700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX9895771.1"
                     /translation="MSILSFGGVTVRFGARTLLRDVTFTVDGGERWGIVGRNGAGKTT
                     LFRLITGAMEPTAGAVVKTSGLRVSLLDQLRDFGSAATVWEAAAAGYRDALALERLLE
                     RQGERLAELGEAVTEADLVRYGRDQDAFAHAGGYEFHARVDAVLQGLGFDALESKRRP
                     LAGLSGGEQGRLGLAAQLAAPADVVLLDEPTNHLDLETTDWLRHYLGEFGESVLVISH
                     DRAFLDDTVDHVLHVADGTTTAYRGGYSAFVTQRAERLVTLERQVEQQRRFIAKEEDF
                     IRRNIAGQKTAQAKGRRRRLDRLPRLSPPPSDDETMALRLEADGRSGDQVIIAEALDI
                     RIGSRPLVRGFSAVARRGDMIALVGPNGAGKTTFLATLLGERQPSRGSIRFGAGVTPS
                     WFRQDLAQVPLDRTLYESIASVRPAWGRGPIQAHLGRFGFSGDEVQRHTSLLSGGERA
                     RLALALIMLTRANLLVLDEPTNHLDVESIEALEDAFEGFEGSAIIVSHDRAFLRELAT
                     RVWAFDGDRIVDFDGAFVEWEPTWAERLSQRAAEVADREAEVRSATEIRTRRLNQSKR
                     DAEQALRTAREAAATLEALVQRLEARVAELEAALGDPALYDGRGENARRAGELDRELK
                     QARSGLDQTLLEWTRAEDTVSRLATSE"
     gene            8855..9919
                     /locus_tag="VGA78_17705"
     CDS             8855..9919
                     /locus_tag="VGA78_17705"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX9895772.1"
                     /translation="MLRVLRHSAFITIATIAAAACGDNPVAPGERYGDAFSRMWEAFD
                     AQYPSFGLKGVDWASIRAQYAGPAAGAASTSAFIDVVKTALAPLRDGHAYLLSPGGQS
                     IPTFTSSRFVNWDQTVWLQYAAQGGWIQAKPNLGWAEFAGVAYIAIGGWNSAQFSAAD
                     VDQILERFRGRSHLIIDVRPNPGGDDQLARDVAARFTPVPVTGEYLQFRNGPRHDDLT
                     PETPRTIQPRGTWQFTGTVHVLAGRRSASSNETFVAFMREMPQVAIVGDTTAGSSGNP
                     QFVDLVDGWRVGVPRWIVRTADRKVVEGSGIAPDLYVPLVAADFEAGRDPVLDYSVGF
                     LREAGARGAPRAGPRFAKAR"
BASE COUNT         1624 a         3482 c         3209 g         1609 t
ORIGIN      
        1 gaccggaacc ggaactcacc ccgcagctcc accccgaagg cgctgggcgc ggtcgcgtac
       61 gccgcccgaa gccgaatcag cctgcgccag gggtcccaat cggggtcgta agtggtctgg
      121 accacaccgc ctccaaccag caacccctgg tcggagttga atcccagcca gggaatcgca
      181 ttgaagcggc tgccgcggac caggggcgcc tccgccgcat ccaccagctc cggtggagac
      241 aagtcccgac ttacctggag gcgtcgcgcc agacttgagt ccatgatggt caccccggct
      301 ggcccggcca ggtgcagcat cggcgcgaag accccggagc cgcggatcag cacgacatcg
      361 tcgccacctc ggagatacaa ccggaccagg ttggtctcgg cggcgtgaaa gctctggtcg
      421 aagcgtccgg cgatccgcat ccgcatcacg ctgtcgacgc tgaattcgac gctgacactg
      481 tcggagccgg tggtcccgta gacgtcggcg tcttcgacga ccagcagccg gaatcgctgc
      541 gcggcttcag ggagaccgtc ccggcgcaat cgcagcttcg ccgccagctc cgccccgttc
      601 cgggcgcggt actccggcgg gaggtgatcg accgccgctt cgatgacgga atcggtgagg
      661 cgggcccgaa gctcgagtgc caccggaatc cagcgcgagc ggtcgagccc cgtcagcagg
      721 tggcgatcga gcactcgggt tcgggccgtg acgggcagct tgccggtgta atcctcgccg
      781 aactcggcca gctcggccca tccggtcgcg gccagcgatg ccaccagtcc gtcgaatcgg
      841 gagaaggcgc cgtcccgatc cctcgggagc ggtgtgaaga tcccaccccg ctccgcccag
      901 agccactcct ggggcagagg atcccaggcg ccgacataga ggtcgaacag tcgctcccgc
      961 aggtaggaga cggtgtcgac cgcctgcgcg ccgggcgaag cgagggtttc cagcagcgcc
     1021 gaggtcggga cggccacgcc gggatcgtcc agctcctgtc gaaagcgggt ttccacccca
     1081 tgctccagga aaccgggcga cggggccgag ccggtcatca tggccaccag gcgttccgag
     1141 gtcacgccca ctcccgccgc gcgggccagg gtgggccaga ccagcggagc accagggtgc
     1201 cgggcgctgt acaggtcctg gaagaatccg gacatggcgg cccgtcggaa cctgtcgggc
     1261 atcagggcgg tgagatcccg gtccatcgcc cggaaggtcc aggtttcgcc aactgagtcc
     1321 cggtagtaga gatagcccat cctgagaccg gtatccgccc ccagcagggt gatcccccct
     1381 cgccagcgct ccgggacgat ggcttcgacc cggaccggcg tcccccacag ctcccgatga
     1441 cgggctccga agacccagcg cgtgagccac cccagcggcc ccccggactt gtaccgcatg
     1501 ccggcgacga tcgtcaccga atccggttgc tgggccgggg aaggccgggc cgacgcgagg
     1561 agagtccccg caagcagtaa gtaacgagtt gatccagcca cgtggttaat agggattggc
     1621 gcaattctac caccttggct cgccagtcac gagagtcgac ggtatttttg ccgccggccc
     1681 ctcaccgagc tcactatgcg attgctgcgc ccgctcgcgg ttctggcgct ggttctgccc
     1741 tgcaccctga cggctcagac ccgcccggtg cgagtgttca tttccgtcga catggaaggg
     1801 atcggcggca tcgggaccgg tgccatgacc agctccaacg gcaaagacta cagcaccggc
     1861 cgggagctca tgaccgcgga ggtgaacgcg gtcgtcgagg cgatctttgc ccggggcgcg
     1921 gcccaggttc tggtgaacga ttcccacggg gacatgcaga acctgctcca caccaggctg
     1981 gatccccggg tccagtacat ccagggggcg gtcaagccct atgggatgac ccagggactg
     2041 gattcgacct acgacgctgt ggttttcgtg ggctatcacg ccatggcccg gagcgaagac
     2101 ggctttctgg cccataccgg ctccggcacg gtgcaggggc tctggatcaa cggcaccgaa
     2161 gtaggcgagg gtggcctgaa cgcctacctg gccgggtcgg tcggggttcc ggtggtggtc
     2221 gcggcagggg attcgacctt tacccgcgag atccggttgc tcctgcccac agtccggacc
     2281 gtcgccacca aactggccgt cggaggccag gtggcacggc tcgatcaccc cgacctggtg
     2341 cgggcgaaac tccgcgacgc cgtcacggcc gcgctggccg acctccgctc gtttcgtccc
     2401 cttcggccaa cggaaccggt gacggtgcgg ctccggttcg ataccaccac gcgagccgat
     2461 atcgtggagg tcatcccggg cgtgcggcga gtggacggca ccacgatcga gttttccgcg
     2521 ccgaccatgc ggcaggcgta tccgatggtt cggctgatgt atcggtatgt gtcctggtag
     2581 tcgaagacag tcgaaggcgg tcgaaggcgt cgaagaaggc cacgaggccg catcgaacgg
     2641 cgggtaccgt cttcgaccaa cttcgaccgt cttcgaccac cttcgactag ttacggtagt
     2701 ccagcggtgg cttccgatct cccaccatgg cgcggtactg gtgccctccc acccggcggt
     2761 cgaactcggc ccgggcccgg gtgaggtgtg acggatcgct gaagagctcc accgccgtga
     2821 gcgccatggt cttggcggct accatcattc ccttggcgcc gatggacatt ccgcctgcgg
     2881 ctacggcctg ccagctgtgc gccggggtgc cgggcaccca ggtggccgcg ctcatctgaa
     2941 ccgtcggcac cacccagctc acatcgccca tgtcggtcga cccactcgag actccgacct
     3001 ccggcgccag gatcttcgct tcggtgccgg gggccggcac cgtcccggcc agcgagggcc
     3061 ggagctgttc ggcgaagtgc tgctcctcgg gcgtgtaggt tatgccgccc acccgcttga
     3121 gctgccgctc catgagatcg gccagataat cgttcgccaa tacgttgtac accgcattga
     3181 ccagctcgaa atccatggtg gtgccggtgc cgagcgcggc gcccttcgca gcgttggtga
     3241 ctcgctccca gattccgtcc agcagccgca tatcgctgtg ccgggcgtag tagtagacct
     3301 cggcgaagtc ggggaccacg ttgggcgcct tgccgccggc ggtgatgatg taatggatcc
     3361 gggtctcttg cggcacgtgc tcccgcatca ggttcaccat gctgttcatc gcttcgacgc
     3421 cgtcgagggc ggagcggccc tgttccggcg ccgccgccgc gtgcgcgctg acgccgcgga
     3481 agcgaaactt ggcgctcatg ttggccaggg tggtggcctt ggtgacctga ttgacgtcgc
     3541 ccgggtgcca ggtgacgact gcgtcgatcc ctcggaagag gccggcgcga atcatgtaga
     3601 ccttggcgcc tccgccttcc tccgccggcg taccgaagaa cttgacggtc ccggcccggc
     3661 cgctctgctg cagccattcc ttcaccgcga ttgcggcagc ggtggaggcg gtgccgaaca
     3721 ggtgatggcc gcacccgtgg cccggcccgc cctcgatcag aatcttccgc atgggggtgg
     3781 catcctggga caatcccggc agggcatcga actctcccac gatgccgatc accgggctgc
     3841 cctggcccca gctggcgaca aacgcggtgg ggatgtcggc cactccggcc tcgaccgtga
     3901 atccggcgcc gcggagctgc tcctgcaaca gggcgctgct gcgggtctcc tggtacccca
     3961 cctcggcgaa ctcccagatc cgacgcgcca caccggtgta ggcgccgctc ctggcatcga
     4021 gcgccgccaa catggcgtcg gtccccgggc gcgactgagc cgacaacgcg gcagcaccgc
     4081 ccatcaggat aagccagatg gtgccaatat tcctcacgat ccctccctgc tgttaggcga
     4141 cgccatcgtc gagatagggc ttcagatggt gcggcttgtt ttcactgcaa agtcatccgc
     4201 agattacgcc gattgcgcag ataagcgatt gtactaaacc acccaaagta ctgtgttaaa
     4261 ctgcgccaag caggtaccga gtgatcggcg gcatctgcgc aatctgcgga caagtccgct
     4321 tgccgaactc aaagtgtttt tgaatccgcg taatccgtgt aatccgtgga tggtagttgc
     4381 tgtcagctga ccggtggccg gcgatcgaac cagggccggg cccgctccag ttgtcccgcc
     4441 agccggaaca aggtggcctc gtcgccgaaa cgcccggtga aatggacccc gatcggcagc
     4501 ccttcggcat tccattcgag cggcactgac atggccggct ggccggtgac gttcgcgacc
     4561 ggactccagg gcgtgaactc gaaggcgttc gccgcggcct catccagcat gcccatcatc
     4621 tcgaggaccc ttcccgcccc gacccgcccc agcgtcttga ggatcaggcg gtctcgcggg
     4681 gtgggttgaa gcgacccggt cggcggcggc ggcaaggcca ccgtgggagt cagcagcgca
     4741 tcccactcgg cggagaaccg gccgatccgc cgggcgtcca tctgcagcag ccgcgtggcg
     4801 gtgacaaact ccgccgcgct cagagtcctg cccagcagtc ccagggccca ggtctcgcct
     4861 tcgaaatccg ccggaccggc cttccgcccg accagccgtt cggcctcctc gatatcgccc
     4921 cggcattcgc ccgccaccat caccatgaag tttcgcgcga aggccttccc gtcgaaatcc
     4981 ggttccgcct cctccacctg atgtcccagc gaccgcaaca gctccacggt gcgatgcacc
     5041 gcccggacgc agtcgtcatg aacctgacgg ccgagccagg gacgggtggt aaaggcgatc
     5101 cgaagcggcc caggctcgct tcccacctcg tcccggtagg gccgatcggg gcgcggcatg
     5161 aaataaggag cacccacgtc ccctccggcg gtggcgtcga gcagagcggc actgtcacgc
     5221 acactgcggg acaggacgtg ttccaccacg cagccctgcc agagctcacc ccgatcgggg
     5281 ccgagcggtg tccggccgcg ggtgggcttg aggccgaaga ttccgcagca ggaggccggg
     5341 atccggatcg aacccccgcc atcaccgccg cctgccaccg gcaccatccc gctggccacg
     5401 gccgccgcgg aaccgccgct cgagccgccg gcgatccggc gtgggtccca ggggttgttg
     5461 gtggggccga acagctcggg ctcggtgaac gggaccaggc ccagttcggg cgtgttggtc
     5521 ttgcccacaa tgaccagtcc cgccgcgcga taccgcgcca ccagctcggt atcgtggtcg
     5581 ggcacgaatc cccgcagaaa ccgggagccg gcccgcatcg gctcgcccgc aaccagggcc
     5641 acaaggtcct tgatcaggag cggcacgccg cgaaacgggc cgtcgggcaa tccggcatcg
     5701 gcgtcacgcc gggcccgctc gaacatcgga tggatgaccg cgttgagcct cgggttcagc
     5761 cgctcgatcc gcgcgatgca ctcatcgacc agttcccgag gcgaaacctc tccccgccga
     5821 accagctcgg ccagcccgac ggcatcgtaa gctgtgtact cttggaatcc tggcattagc
     5881 cggcagtcga agggggtcga agcgggtcga agggggtcga ggccgcggat caatctacct
     5941 gcggggtcgc cactggtatc gcttgaggtc gatccgtccc gcgctctcca acctgacccc
     6001 ctccgctttg agcaaggccc gctgatgggt gacgctgtcc gaagcagccc ggggactgat
     6061 ttcccctcgg gcgttgatga ctcggtgcca gggtacgtcc tcgcccgcat ggcgaagggc
     6121 gtagccggcc agccggggct gtcggtgaaa cccagccagc ttggccacct gaccgtaagt
     6181 ggcaacccgg cccttaggga ttctccgaac ggtttccagg attcgggcgt gggaggttac
     6241 cttcttcgac tgtcttcgac cgtcttcgac tagcttcgac cgatttcgtg ccatggcaga
     6301 tcccttcgtc cagtggtatg gccacaagct gtgggcccac gatctctact gccaggagat
     6361 cgccacgctt acccccgagc gcttcaccca ggatacctgg agcagctacc cgtccatccg
     6421 ggacacaatg gtccatatct tctccgccga cggccgttgg ctggaccggt tccggggcga
     6481 gcccccgcgc gccgcgctgc aaccggccga ctatccctac ctggaggata tccgagccac
     6541 gtggcgtgag atcgaagagg ctcagctcgc gttcgtgagg caactgagcc tcggcatggc
     6601 ggccaccatc accatgcccg ccgagaacgg ccaggattcg cacgtcattc cggcctgggt
     6661 cccgctctac cacgccgccc atcacgccgg gtatcatcgg ggccagctag ccaccatgct
     6721 gcgacagctg ggacatcggc cgccgacaac cgacttcctc gattatctgg ttgctactcg
     6781 ctagtcgcga gtcgcgaaac cgtatcctcg gcgcgggtcc attccagcag cgtctgatcc
     6841 aacccgctgc gggcttgttt caactcccgg tcgagctctc ccgcccgccg ggcattctcg
     6901 ccccgtccat cgtacagcgc cggatcccct aacgccgcct cgagctccgc cacccgggct
     6961 tccagtcgct ggaccagggc ttccagagtg gctgccgcct cgcgcgccgt gcgcagcgcc
     7021 tgttcggcgt cgcgtttgct ctgattgagc cggcgggtcc tgatctccgt cgccgagcgc
     7081 acctccgcct cccggtcggc tacttcggcg gcccgctgcg acagccgttc ggcccaggtg
     7141 ggttcccatt cgacgaaggc tccgtcgaaa tccacgatgc gatcgccgtc gaaggcccag
     7201 actcgggtgg cgagctcgcg caggaacgcc cgatcgtgac tcacgatgat ggcactgccc
     7261 tcgaatccct cgaaggcgtc ctccagcgct tcgatgctct cgacatcgag gtgattggtg
     7321 ggctcgtcca gcaccagcag gttcgcccgg gtcagcatga tcagcgccaa cgccagtcgc
     7381 gcccgttcgc ccccggagag cagcgaagta tgccgctgca cctcgtcgcc gctgaagccg
     7441 aatcggccca gatgggcctg aatggggcca cggccccatg cggggcggac cgacgcaatg
     7501 ctctcgtaga gggtccggtc gagcggcacc tgggccaggt cctgccggaa ccacgatggc
     7561 gtcacccccg ccccgaagcg gatcgagccc ctggacggct gtcgctcacc cagcagcgta
     7621 gcgaggaaag tggtcttgcc cgcgccgtta ggtccaacca gcgcgatcat gtccccccgg
     7681 cgggcgaccg cgctgaaacc ccgcaccagg ggccgcgagc cgatccggat gtcgagcgct
     7741 tcggcgatga tcacctggtc cccgctgcgg ccgtcggctt ccagccgcag cgccatggtc
     7801 tcgtcatccg acggaggggg cgagagccga ggaagccggt ccagccgccg gcgacggccc
     7861 ttggcctgag ccgtcttctg ccccgcgatg ttccggcgga tgaagtcctc ttccttggcg
     7921 atgaaccgcc gctgctgctc cacctgacgt tccagggtga ccaggcgctc ggcccgctgg
     7981 gtgacgaacg cactgtagcc gccccggtaa gccgtcgtgg tgccatccgc cacgtgcagg
     8041 acatgatcca cggtgtcgtc gagaaacgcg cggtcgtggc tgattaccag gaccgactct
     8101 ccgaactcgc ccaggtagtg ccgcagccag tcggtggttt ccagatcgag gtggttggtt
     8161 ggctcgtcga gcaggacaac gtcagccgga gccgcgagct gggcggccaa tcccaggcgg
     8221 ccctgctctc ctccgctcag gcccgccagc ggccgccgct tcgactcgag cgcatcgaag
     8281 ccaagaccct gaagcaccgc gtcaacccgc gcatggaatt cgtagccccc ggcgtgggca
     8341 aacgcgtcct ggtccctgcc ataacgcacc aggtcggctt cggtcacggc ctcccccagc
     8401 tccgccaggc gctcgccttg ccgctccagc aaacgctcca gcgccagcgc gtcgcgatac
     8461 cccgccgccg cggcttccca gacggtggcc gcgctgccaa aatccctgag ctggtcgagc
     8521 agcgacaccc ggaggcccga ggtcttcacc accgctcccg cggtcggttc catagccccg
     8581 gtgatgagcc ggaacagggt ggtcttgccg gccccgttcc gtcccacaat cccccaccgc
     8641 tcgccaccgt ccactgtgaa ggtgacgtcg cggaggaggg tccgggcgcc gaagcggacc
     8701 gtgacgccac cgaaggagag gatgctcacg gatggaactt aggcggaggt taggaacgat
     8761 tcacgccgga ctcattgtct cctcacctcc cgccacgcat gctgcgctgg agggctgcaa
     8821 ctgcgcactt ccccaaccct gcaggagtcc ggccatgctc agagtcctcc ggcactcggc
     8881 attcatcacg atcgccacca ttgcagcggc ggcctgtggt gacaacccgg tggcgcccgg
     8941 ggaacgatac ggcgacgcat tcagccggat gtgggaagcc ttcgatgccc agtacccgtc
     9001 cttcggcctc aagggggtgg actgggcgtc gatccgggcg cagtacgccg ggccggcggc
     9061 cggtgcggcc agcaccagcg cattcatcga tgtcgtgaag accgccctgg cacccctccg
     9121 cgatggtcac gcgtatctgt tgagcccggg aggacagtcg atcccgacct tcaccagcag
     9181 ccgtttcgtc aactgggacc agactgtgtg gctccagtat gcggcgcaag gcgggtggat
     9241 tcaggcgaaa cccaatctgg gatgggccga gtttgccggg gtcgcttaca tcgcgatcgg
     9301 tgggtggaac tccgcccagt tctcggcggc cgatgtggat cagatcctgg aacgattccg
     9361 cggccggtcg cacctgatca tcgatgtgcg cccgaacccc ggcggagacg accagttggc
     9421 ccgcgacgtc gccgcgcgat tcaccccggt gccggtgacc ggagaatacc tgcagttccg
     9481 caatgggccc cgccacgacg acctcacgcc ggagacgccc cgcaccattc agccgcgcgg
     9541 cacgtggcag tttaccggaa cggtgcacgt cctggccggg cgccgctccg ccagctccaa
     9601 cgagaccttc gtggcgttca tgcgcgaaat gccgcaggtc gccatcgtgg gggacaccac
     9661 cgcggggtcc tcagggaatc cccagttcgt cgacctggtc gacggatggc gggtcggcgt
     9721 gccgcgatgg atcgttcgca cggccgaccg gaaagtggtg gagggatcgg gcatcgcacc
     9781 cgacctgtac gtaccgctgg tggccgccga tttcgaggcg ggacgggatc cggtgctcga
     9841 ctactcggtg ggtttcttgc gcgaggccgg agcccggggg gcgccacggg caggtccccg
     9901 atttgccaag gcgcgctagc ggcc
//
LOCUS       DASWKS010000621         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1452937, whole genome shotgun sequence.
ACCESSION   DASWKS010000621 DASWKS010000000
VERSION     DASWKS010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1452937"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..1199)
                     /locus_tag="VGA78_17710"
     CDS             complement(132..1199)
                     /locus_tag="VGA78_17710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895773.1"
                     /translation="MSAERPSDAGTSPQRRVDRIRVFREELSAVEQELGPLLEPPARA
                     RLDEHHSAVLDRLKGAFDVDASEAERQLSLGMRVASLLGAFAFCAAVFFFFYRYWGRI
                     STPTQVGLLVSGPLLGLAATEFAARRERTLYFALLAGLVTCASFVLALEALGRIFSLP
                     TSPWRYLAWGGFCWTLAFAYGFRLVLAAAVVSLTVFLLGSATLLTGAWWASFFSRPEG
                     MVLVGAAWVGMLAVRPSLLPPDFAATVRLTGASIAFIGLLTLGLNGNLSLVPLGRRVL
                     ESIYDAVALGAGAAGIGLGIRRGWAETRLVSTGFVILLLVVKAFDWWWEWLPRELFFL
                     VLGLMAVGILVALRRLRARLA"
     gene            complement(1196..>1511)
                     /locus_tag="VGA78_17715"
     CDS             complement(1196..>1511)
                     /locus_tag="VGA78_17715"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF014067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX9895774.1"
                     /translation="FRWHDQFNLALDPVTARAFHDETLPADGAKLAHFCSMCGPKFCS
                     MKITQDLREQARGMEQKSREFRERGGELYVQQQGAGSRKQGAGSREQEAGSREADESI
                     VA"
BASE COUNT          299 a          570 c          462 g          180 t
ORIGIN      
        1 gacgtacgcc tcggtctcga cgtacagcgg cacgccatcg ccggcttcgc ccacccggtt
       61 ccacacaccc aacccgaccg acccggccat cgagaccaga gcgatcacca gggtgagccg
      121 cacgccgggt ctcacgccag cctcgcgcga agccgccgca acgccaccag aatcccgacc
      181 gccatgaggc cgagcaccag gaagaacagc tcccgcggca gccactccca ccaccagtcg
      241 aaagccttca ccaccagcag caagatcacg aacccggtac tgaccagccg ggtctcggcc
      301 cagccacgac ggatgccgag cccaatcccc gcggcacccg cgcccagggc aaccgcatcg
      361 tagatcgatt ccagcacccg ccggcccagc ggcaccaggc tcagattgcc attgaggccc
      421 agagtcaaca agccgatgaa ggcgatgctg gcgccggtga gacgaaccgt ggcggcaaaa
      481 tccggcggca acagcgaggg ccgaaccgcg agcatcccca cccacgccgc ccccaccagg
      541 accattccct ccggccggga gaagaagctg gcccaccagg ccccggtgag gagagtggca
      601 ctgcccaaca gaaacacggt gaggctcacc accgcggccg cgaggaccag ccggaaacca
      661 taggcgaagg ccagggtcca gcagaacccg ccccacgcca ggtaccgcca gggcgacgtc
      721 gggaggctga agatgcgtcc cagggcctcg agcgccagca cgaagctggc gcaggtgacc
      781 aacccggcca gcagggcgaa gtacaaagtg cgctcccggc gggccgcgaa ttccgtcgct
      841 gccaggccga ggagaggacc ggacacgagc aacccgactt gcgtgggggt ggagatccgc
      901 ccccagtagc ggtagaagaa gaagaacacg gcggcgcaga acgcgaaggc gcccagcagc
      961 gaggcgaccc gcatgccgag cgaaagctgc cgttccgcct cgctggcatc cacatcgaac
     1021 gcgcccttga gccggtcgag gacggctgag tgatgctcat ccaatcgggc ccgggccggc
     1081 ggctccagca ggggcccgag ctcctgctcg accgcggaca gttcctcccg gaacacccgg
     1141 atccggtcca cccgccgctg cggggaggtc ccggcatcgg acggccgctc agcactcacg
     1201 cgacgatgct ttcatccgcc tccctgctcc ctgcttcctg ctccctgctt cctgctccct
     1261 gcttcctgct ccctgctccc tgctgttgga cgtacagttc ccctccccgc tcccggaact
     1321 cccgggactt ctgttccatc ccgcgggcct gctcccggag atcctgggtg atcttcatgg
     1381 aacagaactt gggaccgcac atcgagcaga aatgggccag cttggccccg tcggccggga
     1441 gcgtctcatc gtggaaggcg cgggccgtga ccggatcgag cgccaggttg aactgatcgt
     1501 gccagcggaa c
//
LOCUS       DASWKS010000622         8756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_705155, whole genome shotgun sequence.
ACCESSION   DASWKS010000622 DASWKS010000000
VERSION     DASWKS010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8756
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_705155"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..949)
                     /locus_tag="VGA78_17720"
     CDS             complement(173..949)
                     /locus_tag="VGA78_17720"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9895775.1"
                     /translation="MWRTNLKVLVLALLVIGFYTTVAHVIPQLQSEVPEELNLGTGVS
                     ADALVAAGERIYNGAGGCTACHGLGTRAPNLLTDHAGQGAIGARCGTRGKDCKLYLYE
                     AMTTPGAFLVPGFENIMPDMRRQISEDQIWALIAYLQSQGGEVTVSESDLPKGGRGEP
                     PTPAGPVLTTTTDAATLITEKGCIGCHVLNGTGGPVGPPFDGMGRRLSAERIRRAILE
                     PNADTAKGYEKVAGSMPATFGQMLSAQQLEALVGFLSSRR"
     gene            complement(957..2648)
                     /locus_tag="VGA78_17725"
     CDS             complement(957..2648)
                     /locus_tag="VGA78_17725"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX9895776.1"
                     /translation="MPDLFLLQAAADTAGAYGRFPGIGSRGAVWIAAEVHLMFAAFVL
                     GVPMFAVICELIGITGKDAKYDKLSKEFTRLLVFAYSATALWGGLLLFFLTTLYPRFW
                     GHMARIFGLSMWIYAGLFFVESFTLYLYYYGWDRWKTGRAKWGHWGLGVLLNVWGTTV
                     MFIANGWLTYMMSPPSGVSAETLPEEVGLWNAIANATWMPINIHRLIANAVFGGAIVA
                     AYAGYRFLSAKTDEERAHYDWMGYVGNFIAISTFIVLPFAGYYLGREIYEFNQQMGIT
                     MMGGFMSWLWIIQAVLIGVLFLAANYYLWLGMGRIPGAERFRPYTKWMLLVLVVCWIV
                     WGTPHTMIASRAELAAMGGSHHPFLNVLGVMSAKNTAVNLMILTTFLSFLMYRRANKL
                     PTVAWARTGTMVQAAMFVLAAGVVLFYGVYGYFVEAIVRIGFSVYQVVAVLACIVGVT
                     VIDVLLVRGAESRGEIRWGQMPDRSQYALFVLAVTFTWLMGLMGFARSGIRQHWHVWE
                     VMRDTSPSAATPALGYAANMISTCVVIFLALVAFIFWLGGLAERGAQKPASATEG"
     gene            complement(2641..3966)
                     /locus_tag="VGA78_17730"
     CDS             complement(2641..3966)
                     /locus_tag="VGA78_17730"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX9895777.1"
                     /translation="MNGLAQVGDLPASDPAGSGSMPHVIAWNLTRRCNLECAHCYIAA
                     GPRETADGELDTDECLRIVGEILEVNPSPILILSGGEPLLREDLTQIASSAAARGATV
                     VVGTNGTLLSDQKIGALKDAGVSGVAVSVDSLEPVYHDRFRHGAGSLAATTKALERLR
                     AGRLDFVIQTTVTKGNRTELERLVTWAAEQGAVAFNCYFLVPTGRGARLSDLDAQGYE
                     AVLEDLVRYHSAYLGRMMVRAKCAPHFMRLLHQATPDSPVLNYQTRCPCGTQYCRITP
                     DGKLTPCPYLPEEAGDLRRQSFGDIWRNAALFRSLRSGPLGGKCGQCEYRQICGGCRA
                     RAFAVEGDYLAEDPSCAYQPVAGAEPIRPARPVTYGDPARPGLRWTADARARMQRVPS
                     FVRGVVVKRLEDYARSQGRDEVSAELLREVRERMPVDFSKRRPFFLDDA"
     gene            complement(3974..5836)
                     /locus_tag="VGA78_17735"
     CDS             complement(3974..5836)
                     /locus_tag="VGA78_17735"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX9895778.1"
                     /translation="MYAARLHDVRFRQLETGLPAQFQTPDEIKRQRKIHDKLIEKGLQ
                     LIADSFLDQLGQRCDGAGVPLVRQLLEGINYEEIVKEVNRGEGRLPGLIGFDPNRAAG
                     YDGGDRTRGDVRLGEDGRIVAEDEDAAAKLVGSSGRAYDLVAIGAHGLGRQEKSQLGG
                     VVARSLRDIEKDMLITRDDQPLEGGRFLVGVDGSSYSYRSMRMALELAQEFGASLYVC
                     SAFDVEYHHIVFHNIKDVLSVQASKVFKFEEQEELHNNIIDKGLLKLCQANLKRAEVM
                     AQEFPDVPIKTQILIGKPFQVILQWAEEIKPTLLVAARHGGHRIEGTDLGSQAENLIR
                     LAPCSVLLTGTVGIRPEDIPWIEEDGVASIPWAPEAEVRILRVPPFAQGIARKAVEEF
                     VLEQGGDIVTSPRLDAAIQKLLPTHMQLIMGIGSAEELALAEVKAEEQLKKTRVVGHD
                     DDPLPAEPVVETRCPITGRVGTRPRTATDPIEWTSEAFSRLQLVPLIARPLARNTVER
                     FARNHEMWRVTTRVMDENKQAMIQAYEFDVNTMMVMFNELRAKQIRAEAENGDALSPE
                     MRRFIEEAKAAGVTRCPIRDIEATMDKCPVDFKTVKPEDAREAVVRLLEQEGKT"
     gene            complement(6055..6297)
                     /locus_tag="VGA78_17740"
     CDS             complement(6055..6297)
                     /locus_tag="VGA78_17740"
                     /inference="COORDINATES: protein motif:HMM:NF024851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEX9895779.1"
                     /translation="MADFEERQVEGLRIRIDRGLCVGFGDCIEGAPQAFELDGDGLAV
                     FTAPHAVARDRLLSACDACPVDAITVWDEKGQQVVP"
     gene            complement(6297..6743)
                     /locus_tag="VGA78_17745"
     CDS             complement(6297..6743)
                     /locus_tag="VGA78_17745"
                     /inference="COORDINATES: protein motif:HMM:NF019968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PCP reductase family protein"
                     /protein_id="HEX9895780.1"
                     /translation="MKFLCIECDQQMQFEDRSLPGDGTFGAAFKCPGCGRSIAMLANP
                     METQLVESLGVKIGGRTLDQQPLELVRSSLAGRDDAFSERPDGRTAGRPVDWSPEATE
                     RLARVPGFVRGMVKRIYVDYAREHEIACITPDMMDRARSELGLEGM"
     gene            complement(6740..7555)
                     /locus_tag="VGA78_17750"
     CDS             complement(6740..7555)
                     /locus_tag="VGA78_17750"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HEX9895781.1"
                     /translation="MKFRTYHEVAGTDVSDLAGQVGRQRQHVAKRLESIGRVVAVMSG
                     KGGVGKSYVTAGLALAASARGRSVGVLDADLAGPTVARMLQAAGPLTLDQAGVHPAIG
                     TNGVRVFSTDMLLGDGAPLRWKGEHNEPFVWRGALDAGALREFLSDVVWGPLDLLLVD
                     LPPGTDRLQDLAELVPNLAGVIAVTLPSQESERAVARAMQAAVDAGLRLLGVVENMSG
                     YLCPGCATTSPLFRGDAGQTLALSFGVPLLEQVPFTPSIRPSGRPAVLTAVLP"
     gene            complement(7552..7914)
                     /locus_tag="VGA78_17755"
     CDS             complement(7552..7914)
                     /locus_tag="VGA78_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895782.1"
                     /translation="MREAKFRQAAFVYLHVAILYEAAAYVMFRQGMLPTRFGPPGIWL
                     VVAAGVAGTVVYGLLRWQNVWFARTIWLLHGLRLPALIKGAFFAGGQAPAPPGFYITA
                     IVVVLINMWMLARAGWDL"
     gene            complement(7930..>8756)
                     /locus_tag="VGA78_17760"
     CDS             complement(7930..>8756)
                     /locus_tag="VGA78_17760"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX9895783.1"
                     /translation="ELGPGEAAGILGMAVDPADLGSGLVTLQDGLGELTGALATRLAE
                     MAEVKTASRVERLARDGHGWALRCHGGSDTVADAVILALPAASAADLLAPVVGSLPAF
                     RELSYASSLTVSVAVRSESITLPADATGFVSADPGMFRALTFCSVKFSHRAPEGWSLL
                     RAFFRPGDGAWHQPDEAWVAAALQLLRRILGLREAEPRVWVSRWDKAFVRYPPGFGDQ
                     IDELRERLGGMGQLIELAGAEVDACGVDGAVRSGQAAAAAVIKAAGSRLTAPPLTG"
BASE COUNT         1501 a         3008 c         2879 g         1368 t
ORIGIN      
        1 gccaccaggg cggtcagcat gtactgcacc accacgctgt tcggcaccgg cgcgctcttc
       61 atcccgacca ggggcggcag gtaggcaatg cccagcgtga agagcagata gctgagcacc
      121 agcagcagca ccgcctgcca gaacggatgg cccagcgcgg cgcggaggcg gctcaccggc
      181 ggctcgagag aaagcccacc agggcttcca gctgctgggc cgagagcatc tgaccgaagg
      241 tggcgggcat gctcccggcc accttctcgt agcccttcgc ggtgtcagcg ttgggctcga
      301 ggatggcgcg gcggatccgc tcggcgctga gccggcggcc catgccgtcg aacggcggtc
      361 ctactgggcc gccggtgccg ttcagcacat ggcagccgat gcagcccttc tcggtgatga
      421 gcgtcgcggc gtcggtggtc gtcgtcagca ccggcccggc cggcgtgggg ggctcgcccc
      481 ggccgccctt gggcagatcg ctctcgctca ccgtgacctc cccgccctgc gactggaggt
      541 aggcgatcag agcccagatc tggtcctccg agatctggcg ccgcatatcg ggcatgatgt
      601 tctcgaaccc cggtaccagg aaagcacccg gggtcgtcat ggcctcgtac aggtagagct
      661 tgcagtcctt gccgcgggtc ccgcagcgcg cgccgatagc gccctggcca gcatgatcgg
      721 tcaggaggtt gggggcgcgg gtccccaggc cgtgacaggc ggtacagccg ccggcgccat
      781 tgtagatccg ttcgccggcc gcgaccaggg catcggcgct cacgcccgtg cccaggttca
      841 gctcttcggg gacctcggac tgcagctggg ggatgacgtg cgcgaccgtg gtgtagaacc
      901 cgatcaccag cagggccaag accagcactt tgaggttggt gcgccacatg gctggctcat
      961 ccctccgtgg cggaggcggg tttctgcgcg ccccgctcgg ccaatccgcc gagccagaag
     1021 atgaacgcga ccagggccag gaagatcacc acgcaggtgc tgatcatgtt ggcggcgtag
     1081 cccagcgcgg gggtcgccgc ggatggactc gtgtcgcgca tcacttccca tacgtgccag
     1141 tgctgccgga tcccgctccg ggcgaagccc atgagaccca tcagccaggt gaaggtgaca
     1201 gccagaacga agagggcgta ctgggagcgg tccggcatct ggccccagcg aatctcgccc
     1261 cgcgactccg ccccccgcac cagcagcaca tcgatgaccg tgacgccgac gatgcaggcc
     1321 aggaccgcca ccacctggta cacgctgaag ccgatccgga cgatggcttc cacgaagtag
     1381 ccgtacaccc catagaacag caccaccccg gccgcgagga cgaacatggc ggcctgcacc
     1441 atggtcccgg tccgggccca ggcgacggtg ggaagcttgt tggctcgccg atacatgagg
     1501 aaggacagga aagtggtcag gatcatgagg ttcaccgcgg tattcttggc gctcatgacc
     1561 cccagcacgt tcagaaacgg gtggtgcgac ccgcccatcg cggccagctc ggcccggctc
     1621 gcgatcatgg tatgaggggt gccccacacg atccagcaga ccaccagcac cagcagcatc
     1681 cacttggtat agggccggaa tcgttcggcc ccggggatcc gccccatccc cagccagagg
     1741 tagtaattgg ccgccaggaa gagcaccccg atgagcaccg cctggatgat ccagagccag
     1801 ctcatgaagc cgcccatcat ggtgatgccc atctgctggt tgaactcgta aatctcgcgg
     1861 cccaggtagt acccggcgaa gggcagcacg atgaaggtgg agatggcgat gaagttcccg
     1921 acgtaaccca tccagtcgta atgggcccgc tcttcgtcgg tcttggccga gaggaagcga
     1981 tagccggcgt aggcggccac gatggccccg ccgaacaccg cgttggcgat cagccggtgg
     2041 atgttgatcg gcatccaggt ggcgttcgcg atcgcgttcc agagccccac ttcctccggc
     2101 agggtctcgg cgctcacgcc ggacgggggc gacatcatgt aggtgagcca cccgttcgcg
     2161 atgaacatca cggtggtgcc ccacacattg agcagcacgc ccaggcccca gtggccccat
     2221 ttggcccggc ccgtcttcca gcggtcccag ccgtagtaat agaggtagag ggtgaacgac
     2281 tcgacgaaga agagcccggc gtagatccac atcgacagcc cgaagatccg ggccatgtga
     2341 ccccagaacc ggggatagag cgtggtcagg aagaacagga gcaggccgcc ccagagcgcc
     2401 gtggcgctgt aggcgaagac cagcagccga gtgaactcct tggagagctt gtcgtatttg
     2461 gcgtccttgc cggtgatccc gatcagctcg cagatcaccg cgaacatcgg gacgcctagc
     2521 acgaacgcgg cgaacatgag gtggacctcg gccgcgatcc acaccgcgcc gcgcgagccg
     2581 atgccgggga accgcccgta ggcgccggcg gtatcggccg ccgcctgcag caggaagagg
     2641 tcaggcatcg tcgaggaaga acggccggcg tttggagaaa tcgaccggca tgcgttcgcg
     2701 gacctcgcgc agcagctcgg cgctcacttc gtcccggccc tgggaccggg cataatcctc
     2761 cagccgcttc accaccacgc cccggacgaa agagggcacc cgctgcatcc gggcccgcgc
     2821 gtcggcggtc cagcggagcc cgggccgcgc cgggtcgcca taggtgaccg ggcgcgcggg
     2881 gcggatcggc tccgcgccgg ccaccggctg gtaggcacag gacggatctt ccgcgagata
     2941 gtcgccctcg accgcgaagg cccgggcccg gcagccgccg cagatctggc ggtactcgca
     3001 ctggccgcac ttgccgccca gcgggccgga ccggagcgat cgaaacaggg ccgcgttgcg
     3061 ccagatgtcg ccgaaggact gccgccggag atcgcctgct tcctcgggga ggtaggggca
     3121 gggagtcagc ttaccgtcgg gagtgatgcg gcagtactgg gtgccgcaag gacagcgggt
     3181 ctggtagttg agcaccggcg agtcgggcgt ggcctggtgc agcaaccgca tgaaatgcgg
     3241 ggcgcacttg gcccgcacca tcatccggcc cagataggcg ctgtgatagc gtaccagatc
     3301 ctccagcacg gcctcgtaac cctgggcgtc caggtcggac agccgcgcgc cccggccggt
     3361 gggtaccagg aaataacagt tgaacgccac cgcgccctgc tcggcggccc aggtgaccag
     3421 ccgctccagc tcggtgcggt tgcccttggt gaccgtggtc tgaatgacga aatcgagtcg
     3481 ccccgcccgc agccgctcca gcgccttggt ggtggccgcg agcgagcccg cgccgtggcg
     3541 gaaacggtcg tgatagaccg gctccagcga atccacgctc accgccacgc cgctcacccc
     3601 ggcgtccttg agggcgccga ttttctggtc gctgagcagg gtcccgttgg tgccgaccac
     3661 cacggtggcg ccgcgcgccg ccgcactgga ggcgatctgg gtcagatcct cccgcagcag
     3721 cggctcgccg ccggagagga tcaggatggg tgagggattg acctccagga tctcgcccac
     3781 gatgcggagg cattcgtcgg tgtcgagctc gccgtcggcg gtctcccggg gaccggcggc
     3841 gatatagcag tgggcgcatt ccaggttgca gcgacgggtc aggttccagg cgatgacgtg
     3901 cggcatgctg ccgctcccgg ccgggtcaga ggccggaaga tctcccacct gggccagccc
     3961 gttcaccgca atatcaggtc tttccttcct gctcgaggag acggaccacg gcttccctcg
     4021 cgtcttcggg cttcacggtc ttgaaatcga ccgggcactt gtccatcgtc gcttcgatat
     4081 cgcggatggg gcagcgggtg accccagcgg ccttggcctc ttcgatgaaa cgccgcatct
     4141 cgggcgacag cgcatcgccg ttctcggcct cggcccggat ctgtttggcg cggagctcgt
     4201 tgaacatcac catcatggtg ttcacgtcga actcataggc ctggatcatg gcctgcttgt
     4261 tctcgtccat cacccgggtg gtgacccgcc acatctcgtg attgcgggcg aagcgctcca
     4321 ccgtgttccg ggccagcggc cgcgcgatca agggtaccag ctggagccgg gagaacgcct
     4381 cgctggtcca ctcgatggga tcggtcgcgg tgcggggccg ggtgccgacc cggccggtga
     4441 tcgggcagcg ggtctccact accggctcag ccggcagcgg atcgtcgtcg tggcccacta
     4501 ccctggtctt cttgagctgt tcttcggctt tgacctcggc cagcgccaat tcctcggcgc
     4561 tgccgatgcc catgatcagc tgcatgtggg tggggagcag cttctgaatc gcggcgtcga
     4621 gccgggggct ggtgacgatg tcaccaccct gttccagcac gaactcttcg accgccttgc
     4681 gcgcgatgcc ctgggcaaag ggtggcaccc ggaggatgcg aacttcggct tcgggcgccc
     4741 acgggatcga cgcgacgccg tcttcctcga tccaggggat gtcctcgggc cggatcccga
     4801 ccgtgccggt gagcagcacg ctgcagggag ccagacggat caggttctcc gcctgcgatc
     4861 ccaggtcggt gccttcgatc cggtggccgc cgtggcgggc cgcgaccagc agtgtgggct
     4921 tgatctcctc ggcccactgc aggatcacct ggaacggctt cccgatcagg atctgggtct
     4981 tgatgggaac gtcggggaac tcctgcgcca tcacctcggc ccgcttgagg ttggcctggc
     5041 acagcttgag cagccccttg tcgatgatgt tgttgtggag ctcttcctgc tcctcgaact
     5101 tgaacacctt cgaggcctgg accgacagca cgtccttgat gttatggaag acgatgtggt
     5161 ggtattcgac atcgaaggcg ctgcagacgt agagcgaggc gccgaactcc tgggccagct
     5221 ccagcgccat ccgcatcgag cgatagctgt aggacgatcc gtcgacaccc accaggaacc
     5281 gtccgccttc cagcggctgg tcgtcccggg tgatcagcat gtccttctcg atatcccgga
     5341 gcgaacgggc caccaccccg cccagctggc tcttctcctg gcggcccaga ccgtgggccc
     5401 cgatcgccac caggtcgtag gcccggccgg agctgcccac cagcttggcg gcggcgtctt
     5461 cgtcctccgc cacgatacgg ccgtcttctc ccagccgcac gtcgccccgg gtccggtcgc
     5521 cgccgtcata ccccgcggcc cggttgggat cgaagccgat cagccccggg aggcgacctt
     5581 cgccccggtt gacctccttg acgatctctt cgtagttgat cccctcgagc agctggcgca
     5641 ccagcggcac gccggccccg tcgcagcgct gccccaactg atcgagaaag ctgtccgcga
     5701 tgagctgaag gcctttttcg atcagcttat cgtggatctt gcgctgtctc ttgatctcgt
     5761 cgggggtctg gaactgggcg ggaagtccgg tctcgagttg gcggaaccgc acgtcgtgca
     5821 ggcgggccgc gtacacgtga ttaccggtga cgcgccctcc ggtccggcga cagagctcaa
     5881 tcgcacgatc gacggcccag tcggagtgct gcgagttgtc gacagggaca aagatctccc
     5941 tgtacactat gtcccccctc cggccaaggt cggcggccct cgtgaaggac tgcagttgca
     6001 tgatgttgga aaactgcccc ggccgcaatg atatgcggtt ggtggtaggg cctgtcaagg
     6061 gactacttgc tggcccttct cgtcccacac cgtgatcgcg tccaccgggc atgcgtcgca
     6121 cgcactcagc agccggtcgc gggcgactgc atggggcgcg gtgaacaccg ccaggccatc
     6181 gccgtcgagc tcaaaggcct gcggcgcgcc ctcgatgcaa tcgccaaaac cgacgcagag
     6241 cccccgatcg atgcggatgc ggagcccttc gacctgccgc tcctcgaaat ccgccactac
     6301 atcccctcca gtcccagctc ggagcgggcc cggtccatca tgtcgggggt gatgcaggcg
     6361 atttcatgct cgcgggcgta atcgacgtag atccgtttca ccatgccccg cacgaacccg
     6421 ggaacccggg caagccgctc ggttgcctct ggggaccaat cgaccggccg accggccgtc
     6481 cggccgtccg gccgttccga aaaggcgtca tcccggccgg ccaggctgct tcggaccagc
     6541 tcgagcggct gctggtccaa ggtgcggcca ccgattttca cgcccaggga ctccaccagc
     6601 tgggtttcca tgggattggc cagcatcgcg atggagcggc cgcacccggg gcacttgaac
     6661 gcggcgccga aggtcccgtc ccccggcagg ctgcgatcct cgaactgcat ctgctgatcg
     6721 cactctatgc agaggaattt catggcagga ccgcggtcag gacggccgga cggccggacg
     6781 gcctgatgga aggcgtgaag gggacctgtt ccaggagcgg aacgccgaaa cttagcgcca
     6841 gtgtctggcc agcgtctcct ctaaatagag gagatgtggt ggcgcagccg ggacagagat
     6901 accctgacat gttctccacc acgccaagaa gccggaggcc ggcgtcgact gcagcctgca
     6961 tagccctggc caccgcccgc tccgattcct ggctcggcaa ggtcaccgcg atgacgcccg
     7021 ccaggttggg caccagctcc gccagatcct gcagccggtc ggtgccgggc gggagatcca
     7081 ccagcagcag atcgagcggg ccccacacca cgtcggacag aaactccctc agcgcgccgg
     7141 catcgagcgc gccgcgccac acgaagggtt cgttgtgttc gcccttccag cggagcggtg
     7201 ccccatcccc gagcaacata tcggtcgaga aaacccggac cccgttggtt ccgatcgcgg
     7261 ggtggactcc ggcctggtcc agcgtaagcg gcccggccgc ctggagcatt cgcgcaacgg
     7321 tgggtccggc caggtcggcg tcgagcacgc ccacactccg accccgggcc gaagctgcca
     7381 gcgccaagcc ggcggtgaca tagctcttgc ccacaccgcc cttaccgctc atgacggcca
     7441 ccactcggcc gatcgattcc agccgtttgg ccacgtgttg ccgctggcgg cctacctggc
     7501 cagcgaggtc cgagacgtcc gtaccggcca cctcgtggta ggttcggaac ttcacagatc
     7561 ccatcccgct cgggcgagca tccacatatt gatcagcacc acaacgatcg ccgtaatgta
     7621 gaagccgggt ggcgcagggg cctgaccgcc ggcgaagaag gctcccttga tcaaggccgg
     7681 cagcctcaaa ccatgcagca gccagatggt ccgggcgaac cacacgtttt gccagcgcag
     7741 caggccgtat accaccgtgc cggccacgcc ggcggccacc accaaccaga tcccgggcgg
     7801 tccaaagcgc gtgggcagca taccctggcg gaacatgacg taggccgccg cctcgtacag
     7861 aatggcgacg tggagataaa cgaaagcggc ctggcggaat ttggcttcgc gcatggggtg
     7921 ggctgaaggt tatccggtga ggggaggtgc cgtaagccgg gaaccagcag ccttgataac
     7981 ggccgcggcc gccgcttgtc ccgaccgcac cgcaccatcc acgccgcacg cgtccacctc
     8041 cgcgcctgcc agctctatca actggcccat gccgcctagt cgctcccgca gctcatcgat
     8101 ctggtcgccg aaaccgggcg gatagcgcac gaaggccttg tcccagcgac tcacccagac
     8161 ccgcggctct gcttcccgca ggccgaggat gcgccgcagc agctggagcg cggcggcaac
     8221 ccatgcctca tcgggctggt gccaggcgcc atcgccggga cggaagaagg cccggagcag
     8281 cgaccacccc tccggggcgc ggtgggaaaa tttaacggag cagaaggtca gggctcggaa
     8341 cattcccgga tcggccgaga caaagccggt ggcatcggcc ggcagggtga tcgattcgct
     8401 ccgcaccgca accgacaccg tgaggctgga ggcgtaggac aattcgcgga aggcgggcag
     8461 ggagccgacc accggcgcca gcaggtcagc ggcggaggca gccggcagcg ccagaatcac
     8521 cgcatcggcc accgtgtcac tcccgccgtg acaccgcagc gcccagccgt ggccgtcgcg
     8581 agcgagccgc tcgaccctgc tagcggtctt cacctccgcc atttcggcca gccgggtcgc
     8641 gagggcgccg gtcaactcgc ccagaccgtc ttgcaacgtc accaggcccg agcccagatc
     8701 ggccgggtcc accgccattc ccagaatccc ggcggcctca ccggggccga gctcct
//
LOCUS       DASWKS010000623        10790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3633611, whole genome shotgun sequence.
ACCESSION   DASWKS010000623 DASWKS010000000
VERSION     DASWKS010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10790
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3633611"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2486
                     /locus_tag="VGA78_17765"
     CDS             <1..2486
                     /locus_tag="VGA78_17765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895784.1"
                     /translation="NAERGVFKTTDGGKNWKTTLFVSDSTGAMDLELQPGNPSVVYAW
                     MSRIERKPWSIISGSHEGGFYRSSDGGETWSSIRTGLPTDLIGKGNLAVTAANPSRVY
                     ALIEAKPGGGLYRSDDAGLSWTQVNSQGSLIQRPFYYTTLGADPTNADVVYAGAEGFF
                     KSTDGGRTMTPLRTPHGDNHDIWISPRDGNTMIQANDGGANVSFDGGRTWSSQMNQPT
                     SELYGVWFDHAFPYQLYAAQQDNTTLILSSVANPANRTDWRTGPGCETGPIMPHPRER
                     NIVYGSCKGQFEVMNLAMGQSKRYWIGAQSLYGNPASDLILRFQRVSPMATSPHDPSV
                     LYYGSQHVHRTRDKGVTWETISPDLTAHPACCQGVSGEPITRDVTGEEFYSTLYAIAE
                     SPHERGVIWTGANDGPFHVTRDNGKSWKNVTPRDLPPGGRVVWIEPSPHRPGSAYFAV
                     YRYLLGDYQPYLYRTDDYGTSWTRLTDGKNGIPADWPTRVVREDPDREGLLYAGTEFG
                     MFISFDNGAHWQRFDLNLPNVPINDIRIHRQDLIVATQGRALWILDDLTPLHQLTPQV
                     SAGAVQFFRPRDGYRTRSGAEFLSPTLTYYLPSAAEGVVRIEIQNALGQPVNSYSSDT
                     PPRAAGRDPAGDPDDPDTPGGRRPAGVVSRVTTDAGLNRFVWDLRHASGATAPPGRYQ
                     ARLTVGGITQTQPFTVRIDPRLTDEGVTVADLTEQFEHNLRMRELVTAVNQVVSRVRQ
                     AERRLRGASGAAADTLAGVQAVAAKLLTEPVRYGKPGLQAHITYLNGMTTAVDQKIGR
                     DAIARYRVLRREFDAVKAEVDRVLGPGQL"
     gene            2674..3150
                     /locus_tag="VGA78_17770"
     CDS             2674..3150
                     /locus_tag="VGA78_17770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895785.1"
                     /translation="MHSLIRRTATLALALAIPALLPAQTAPDLSGTWTLQVDKSDFGP
                     MPAFTSRTDVIDHKEPKLTIKRTVVSQAGEVTSTLVYGVDGTPYKNTIGNNEATSTLK
                     WDGSTLVIISTLTTPQGEVTVTDRISLSADGKTMTQARLINAGGQEIPQTMVLAKQ"
     gene            3229..4170
                     /locus_tag="VGA78_17775"
     CDS             3229..4170
                     /locus_tag="VGA78_17775"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEX9895786.1"
                     /translation="MGSPGIRSLLPTAFLLAAAWSQAAAQADVGSTRKPRLWRVPKDL
                     PTVQAAIDSARERDTVLVAPGRYYENLRLRGYNIVLGSEFLLTRDSALIGRTVLDGSR
                     PSHPDSGTVLSIYQFEDSTTVIEGFTITGGTGTVWYDNKDKIMFREGGGILIDLAGPT
                     VRHNVITDNRADETRPGVLSAGGGGVRIGFGDPLLERNVIRRNSGRYGGGVVVFHAAA
                     ILRGNVIADNTGGQDFGGAGLWIRGHFSRRLPSLIEDNVITGNVAQGHDGKGQLRRPP
                     AQAGKGGGIIGAALQAVFRRNVVRDNRPNDTEGIPER"
     gene            4272..4448
                     /locus_tag="VGA78_17780"
     CDS             4272..4448
                     /locus_tag="VGA78_17780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895787.1"
                     /translation="MSKSEDKKIAALARKNAAKIKPRRSDEAEQFDATLRLRSGEQDA
                     ETKRLFKEMKKREF"
     gene            4448..5134
                     /locus_tag="VGA78_17785"
     CDS             4448..5134
                     /locus_tag="VGA78_17785"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX9895788.1"
                     /translation="MLSFLLMLQASGLPSQDPARSALPVDHLIYVTRNLDSAVADLER
                     RLGVRATPGGRHPGRGTHNALIALGSDTYLEILAPDPSQPGIALPPWFGPDGQGPAHL
                     ASWAAKGTNLDQLVATATRRGVTMGPIGSGSRRRPDGVLLTWSTTATSAAAGDGLIPF
                     FIDWGSSPHPAASSAAGVRLVSLRAEHPAPDPIRQLLDSLGLALPVTPGPRPALIATL
                     DTPKGRVELR"
     gene            5166..6419
                     /locus_tag="VGA78_17790"
     CDS             5166..6419
                     /locus_tag="VGA78_17790"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX9895789.1"
                     /translation="MTRPTLALLLALGGLPGFVSGAWAQGLPTAGPQSVKLTPSGLAR
                     IDSAMSAYVESGKLPGIVVAVARNGRLAHWKAFGLRSIEANDPMERDDLFRIYSMTKP
                     ITSAAMMLLVDEGKVTLEDPVAKYLPAFADIKVWSRDGPVAPRRPMTIRDLLRHTSGL
                     TYGAFGETPVDSAYRQAGLMEPRWDIAGLMDQLARLPLIGHPGEIWNYGFSTDVAGRI
                     IELVSGMSLDRFFAQRILAPLKMGDSFFEVPPEKRNRFTGYYTRTAGRSVLLDSPDTG
                     SYTRRPPLFSGGGGLVSTVPDYLRFAQMILNGGELDGVRLLRRETAAEMLKNQLPSEL
                     IPIRVGPFTFPGNGFGLGFSVVVDPGEFGINDLGRAGWGGYANTFFWIDPNRGLIAMV
                     FTQSFPFAEHPLEADFRRLVYQALQ"
     gene            6509..6925
                     /locus_tag="VGA78_17795"
     CDS             6509..6925
                     /locus_tag="VGA78_17795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HXXEE domain-containing protein"
                     /protein_id="HEX9895790.1"
                     /translation="MRAWALLVGALGLHVLDEALTDFLGFYNPLVMEIRARIAWFPMP
                     TFAFGTWLTGLIGAVVALAFLGPAVRRGAAGTRLASWALSGVMFANGLGHLGGSLYFG
                     KWLPGTTSAPLLLFASGLLARRTWQRGVATRSPARC"
     gene            complement(6933..7679)
                     /locus_tag="VGA78_17800"
     CDS             complement(6933..7679)
                     /locus_tag="VGA78_17800"
                     /inference="COORDINATES: protein motif:HMM:NF033196.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX9895791.1"
                     /translation="MRLVLVGVSLVTLSSGLWAQAPGRWPPDSLVNTQVIPRTTPVTQ
                     VVGMMRNIAGGLGVRCQFCHVGREGMPLEQFDFASDEKRTKLVARQMMRLVQEVNRRI
                     DTLPGRTSPGLEVTCSTCHRGTSRPVPLFTLMVDAALAGGGDSAIRGYRALRERYYGR
                     DAYDFGETSLNIAAFRLGRASRFDAAFALLRLNEELFPGSSPMYVFRGNIHLMQGDTA
                     GAAGAFREAVRRDSSNAEARGRLRDIGRQP"
     gene            7893..8846
                     /locus_tag="VGA78_17805"
     CDS             7893..8846
                     /locus_tag="VGA78_17805"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX9895792.1"
                     /translation="MLTALALGLLGVAVMQDTVRFTPTIQQPTFAVRDPVLRIKPGTV
                     LISKTNFGAYYTLQGGAFPGEVGPFLIEGATTRDMLKVEVIRVRPNHRYAASQLYRDF
                     GGLSTESRVRFLNEAIPPKRYLWELDTVRMVGTTPMPNSRIGKMELDLQPMLGRVAVA
                     PRGAEAFAGIWPGDFGGNMDAPEVREGTTVYLPIFHDGAYFYFGDGHARQGEGEVNGT
                     GLETSMDVVLKIDLIKGKTIDWPRLEDRDHIMVAGSTRPLIDAFRLAHVELIEWLVEE
                     YGFDKWDAYTLLGQAAESTVANIVDPNYTVIAKIKKRYLPR"
     gene            complement(9083..10066)
                     /locus_tag="VGA78_17810"
     CDS             complement(9083..10066)
                     /locus_tag="VGA78_17810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895793.1"
                     /translation="MTRRFTVLIGLAGAGAFACSPARDFRGDGSAGAPDAESQGLPVS
                     AREIPVRLREDLVEASGAIVSATQPGVVFLMNDSGHDPMLFAVDTAGNDRGAWQVDSA
                     NNIDWEAASPGPCPSGDGRLGAKAPPDRCLYIGDVGDNAAQYPSRALYRMPEPTARGS
                     GYTGRVRAERLRFTYQDGPHDVEAMYVAPDGTVYLITKRRLTDSAGRPRPALVFAVSP
                     AAWGKPDSVAQARLVDSLPVIPGSRPGRLITDAALSPDGRQVAVRTYDQVYLFAADTA
                     GRMQTWVRPVVCNIEPLRERQGEGIAWLSSSQLLLVSEGGEEPLRIIGCRH"
     gene            complement(10063..>10790)
                     /locus_tag="VGA78_17815"
     CDS             complement(10063..>10790)
                     /locus_tag="VGA78_17815"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX9895794.1"
                     /translation="LRPNTRLIAINFPNNPTGKVIAPEIFQALVQLATERDLYLLSDE
                     VYRGLERNPASTLPPAAMLYQRGLSLGVMSKSLGLPGLRIGWIASRDTDALSRMERVK
                     HYLSIACPAPSELLATVALRASRRILERTRGITAQNLELLAGFFDELPDLFQWYTPEG
                     ACVAFPRYLGEDGVEEFCRSAVEEAGVILLPASLFQSRLLPVARDRFRIGFGRRDCAQ
                     AVEALREHLVRSGRAAGSPSGAG"
BASE COUNT         1859 a         3685 c         3530 g         1716 t
ORIGIN      
        1 cgaacgccga gcgaggggtg ttcaagacca ccgacggcgg aaagaactgg aaaacgacgc
       61 tcttcgtgtc ggacagcacc ggggcgatgg acttggagct gcagccgggc aatcccagcg
      121 tggtatacgc ctggatgtcg cgcatcgagc gaaagccctg gagcatcatc agcggctcgc
      181 acgaaggcgg cttctaccgg agcagcgacg gcggcgagac ctggtcctcc attcgtaccg
      241 gccttcccac cgacctgatc ggcaagggca atctcgcggt caccgcggcg aaccccagcc
      301 gggtgtacgc cctgatcgag gccaagccgg gcggcgggct gtaccgctcc gacgacgcgg
      361 gcctgagctg gacccaggtc aactcgcagg gctcgctgat ccagcggccc ttctattaca
      421 ccacgctggg cgccgatccg accaatgccg acgtggtgta tgccggggcg gagggattct
      481 tcaagtccac cgacggcggc cggaccatga cgccgctccg gacgccgcac ggcgacaacc
      541 acgacatctg gatcagcccg cgcgacggga acaccatgat ccaggcgaac gacggcgggg
      601 ccaacgtgtc gttcgacggg ggccggacct ggtcgtccca gatgaaccag cccacgtcgg
      661 agctttacgg cgtctggttc gaccacgcgt ttccctacca gctctacgcc gcccaacagg
      721 acaacacgac gctgatcctg agcagcgtgg ccaacccggc caaccggact gactggcgga
      781 ccggtcccgg atgtgagacc ggcccgatca tgccccaccc cagagagcgg aacatcgtct
      841 acgggtcgtg caaggggcag ttcgaggtga tgaacctcgc gatgggacag tcgaagcgct
      901 attggatcgg cgcccagtcc ctctacggca acccggccag cgacctgatc ctgcggttcc
      961 agcgggtctc accgatggcc acgtcgccgc acgacccctc ggtgctgtac tacggctcgc
     1021 agcacgttca ccggacccgg gacaaaggcg tgacctggga gaccatctcg cccgacctca
     1081 cggcgcatcc ggcctgctgc cagggcgtga gcggcgagcc gattacccgc gacgtgaccg
     1141 gtgaggagtt ctacagcacg ctctacgcga tcgccgagtc gccccacgag cggggggtca
     1201 tctggaccgg cgccaatgac gggccgttcc acgttacccg cgacaacggc aagagctgga
     1261 agaacgtcac gcccagggac ctgcctccgg gaggccgggt cgtctggatc gaaccgtccc
     1321 cccatcgccc cggctcggcc tatttcgcgg tctaccgcta cctgctgggc gactaccagc
     1381 cgtatctcta tcgcaccgat gactacggga ccagctggac ccggctgacc gacggaaaga
     1441 acggcattcc ggccgactgg cccacgcggg tggtgcggga ggaccccgac cgcgaggggt
     1501 tgctctatgc cggcaccgag ttcgggatgt tcatctcgtt cgacaacgga gcccattggc
     1561 agcggttcga tctcaatctg cccaacgtcc cgatcaacga tatccggatt catcggcagg
     1621 acctcatcgt cgccacccag gggcgtgccc tctggattct ggatgacctc acgccgctgc
     1681 atcagctcac cccccaggtg agcgccggcg cggtgcagtt ctttcgcccc cgcgatggct
     1741 atcgcacccg gtcgggggcg gagttcctga gccccacact gacctactat ctcccctcag
     1801 ccgccgaggg ggtggtgagg atcgagatcc agaacgccct ggggcaaccg gtgaacagct
     1861 acagcagcga cactccgccc cgggcggcgg ggcgggaccc ggccggtgat cccgacgatc
     1921 ccgatactcc gggaggccgg cgccccgccg gtgtggtgag ccgggtgacc accgacgccg
     1981 ggctcaatcg cttcgtgtgg gacttgcggc acgcctccgg tgcgaccgcg ccgccgggcc
     2041 gataccaggc ccggctcacg gtcggcggga tcacgcagac tcaaccgttc acggtacgga
     2101 tcgatccgcg gctgacggac gagggcgtca ccgtcgccga tctcaccgaa cagttcgagc
     2161 acaatctccg gatgcgcgag ctggtgacgg cggtgaatca ggtcgtgtct cgggtccgtc
     2221 aggccgagcg ccggctgcgg ggcgcgagtg gtgcggcagc cgatacgctg gccggcgtgc
     2281 aggctgttgc cgccaagctc ctcaccgagc cggtccggta cgggaagccc ggtctccagg
     2341 cccacatcac ttatctcaac gggatgacca ccgccgtcga tcagaagatc gggcgggacg
     2401 cgattgcccg gtaccgggtg ctcaggcggg aattcgacgc ggtaaaggca gaggtcgacc
     2461 gggtgctcgg acccgggcaa ttgtaagggc cgggccacct tcgggcacga tccggtgcgt
     2521 ggtgcagccc agccgctatc tgcgccatcg gcgtaatctg cggatatgtt tccttgcccg
     2581 gcaagcacaa ccctgtccgc ggaatacgcg gatgccggcc gatgctgctt ggatgaagac
     2641 gtttccccgc acacctcgga ggatgttcac ctcatgcact cattgattcg acgcaccgcg
     2701 accctcgcgc tggccctcgc catccctgcc ctgctcccgg cgcagaccgc tcccgatctg
     2761 agcgggacct ggaccctgca ggtcgacaag agcgatttcg ggccgatgcc ggccttcacc
     2821 agccggaccg acgtcatcga ccacaaggaa cccaagctca ccatcaaacg gacggtcgtg
     2881 tcccaggcgg gcgaggtcac ctcgaccctg gtctatgggg tggacggcac accctacaag
     2941 aacacgatcg ggaacaacga agccaccagt accctcaagt gggacgggag caccctggtc
     3001 atcatcagca ccctgaccac gccgcaaggc gaggtgactg tcaccgaccg tatctccctg
     3061 tcggccgacg ggaagaccat gacccaggca cggctcatca atgccggcgg ccaggagatt
     3121 cctcagacga tggttctcgc caaacagtga cggccgcctg actccttcgc cccagccctg
     3181 acgtaaggag tcggtactca ccgattcccc acaacggagg cgttccatat gggctcgcca
     3241 ggcatccgct cactcttgcc gaccgccttt ctgctcgccg ccgcctggag tcaggcggcg
     3301 gcgcaggctg acgtgggatc gacccgaaag ccacgcctgt ggcgggtgcc gaaggatctc
     3361 cccacggtcc aggccgcgat cgattcggct cgggagcggg ataccgtcct ggtggcgccg
     3421 ggacgctact acgagaacct ccggctccgc ggctacaaca tcgtgctcgg cagtgaattc
     3481 ctcctcaccc gcgacagtgc gctgatcggc cgcaccgtgc tggatgggag ccgccccagc
     3541 cacccggact cgggcacggt gctcagcatc taccagttcg aggattccac tacggtgatc
     3601 gagggattca ccatcaccgg tgggaccggc accgtgtggt acgacaacaa ggacaagatc
     3661 atgttccggg agggcggcgg aatcctgatc gatctggcgg gacccacggt ccgtcacaac
     3721 gtcatcaccg acaaccgtgc cgacgagacc cgccctgggg tcctgagcgc cggaggtgga
     3781 ggggtgcgga tcggtttcgg tgaccccctg ctggagcgca acgtgatccg ccggaattcc
     3841 ggccgttacg gcggcggcgt ggtggttttc catgccgcgg ccattctccg cggcaacgtc
     3901 atcgcggaca acaccggagg tcaggacttc ggcggggccg gtctctggat ccggggccat
     3961 ttctcccgcc gcctgccgag cctcatcgag gacaacgtga tcaccgggaa cgtggcccag
     4021 gggcacgatg gcaagggcca gctgcgccgc ccgccggctc aggccggcaa agggggaggc
     4081 atcatcggcg cggcactcca ggcggtattt cgccgcaacg tcgttcggga caaccgaccc
     4141 aacgacaccg aaggcattcc ggagcgttga gggccgcacg gaccgcctga ggaacctcga
     4201 aaacccctgc tgggttatca ttcccggagg cgccgtccgc ctcccagatc caggattcca
     4261 gaggagcagg catgtcaaag tccgaagaca agaagatcgc ggccctcgcc cgaaagaacg
     4321 ccgccaaaat caagccccgc cggagtgacg aggccgaaca gttcgatgcc acgctgcggc
     4381 tgcgctcggg cgagcaggac gccgagacca agcggctctt caaggagatg aagaagcgcg
     4441 agttctgatg ctgtccttcc tgctcatgct ccaggcctca gggcttcctt cccaggatcc
     4501 cgcccggtcg gcgctgccgg tcgaccactt gatctacgtg acgaggaatc tggactccgc
     4561 ggtggcggat ttggaacgcc gactgggggt acgggccaca ccggggggcc ggcatccggg
     4621 acggggaacc cacaatgccc tgatcgcgtt gggctccgac acctaccttg aaatcctggc
     4681 gcccgacccc tcgcaacccg gcatcgctct gcctccctgg ttcggccccg atggccaggg
     4741 gccggctcac ctcgcgagct gggcggccaa gggaaccaac ctggaccagc tcgtcgctac
     4801 ggctacccgc cggggggtga cgatgggtcc gatcggctcc ggcagccgca ggcgacccga
     4861 tggggtcctg ctgacctggt ccaccacggc tacatcagcc gcggccggcg acggcctcat
     4921 cccgttcttc atcgactggg gctcctcacc ccatccggcc gccagctcgg ccgcgggcgt
     4981 cagactggtg agtcttcgcg cggagcatcc ggcgccggac cccatcaggc aactgctgga
     5041 ctcgctgggg ctggcgctgc cggtcacgcc gggtcctcgc cccgccctga tcgcgacgct
     5101 cgatacgccc aaaggccggg tcgagctgcg ctagtcgact ttccttccca accagaaggc
     5161 agtttatgac ccgcccgacc ctcgccctgc tgctcgccct cggtggcttg cccggcttcg
     5221 tttccggagc gtgggcccag gggctgccaa ccgcggggcc ccaatccgtc aagctgaccc
     5281 caagcgggct cgcccgtatc gactccgcca tgagcgccta cgtcgagagc ggcaagctgc
     5341 ccgggatcgt ggtggccgtc gcccggaacg gccggctggc tcactggaag gcgttcggcc
     5401 tccgcagcat cgaagccaac gacccgatgg agcgggacga tctcttccgg atctactcga
     5461 tgaccaagcc gatcaccagc gcggcgatga tgctgctggt tgatgagggg aaggtgacgc
     5521 tggaggaccc ggtcgcgaag tacctgcccg ccttcgccga catcaaggtg tggtcccgcg
     5581 atggccccgt ggcaccccgg cgtccgatga ccattcgcga tctgctgcga cacacctcgg
     5641 ggctcaccta cggcgccttc ggcgagaccc cggtcgattc ggcctaccga caggccgggc
     5701 tcatggagcc ccgatgggac atcgcgggtt tgatggacca gctggcccgg ctgccgctga
     5761 tcggccatcc gggcgagatc tggaactacg gattcagcac cgacgtcgca ggccgcatca
     5821 tcgagctggt gtcgggcatg tcgctcgacc gcttctttgc ccagcggatc ctcgcgccgc
     5881 tcaagatggg ggacagcttt ttcgaggtgc ccccggagaa acggaatcgg ttcaccgggt
     5941 attacacccg caccgccggc cggtcggtat tgctcgattc ccccgacacc ggcagctata
     6001 ctcgacggcc gccgctcttt tccgggggtg gaggcctggt gtcgaccgtg ccggactacc
     6061 tccgcttcgc ccagatgatc ctgaacggcg gcgagctgga cggggtccga ctgctccggc
     6121 gcgagaccgc ggccgagatg ctcaagaacc agctgccatc ggagttgatt cccatcaggg
     6181 tcggcccctt caccttcccc ggcaacgggt tcggcctggg attcagcgtc gtggtcgacc
     6241 ccggagagtt cgggatcaat gatctcggcc gggccggctg gggcggctat gccaatacct
     6301 tcttctggat cgaccccaac cgcggcctga tcgccatggt gttcacccag tccttcccct
     6361 tcgccgagca ccccctggag gccgatttcc gacgtctggt ctaccaggcg ctccagtaac
     6421 ccgcgggcgc acccgcaggg aggcgccgat gcttggggtg gggtcgaggc cgaacccggt
     6481 gtgccgtgag gaagcgggcg ttagacacat gcgtgcctgg gcgttactgg tcggcgcgct
     6541 cgggctgcac gtcctggacg aagcactcac cgacttcctg ggattctaca atccactcgt
     6601 gatggagatc cgggcgcgga tcgcctggtt tccgatgccg acctttgcct ttggcacctg
     6661 gctcaccggt ctcatcgggg ccgtggttgc cctggcgttc ctcggtccgg cggtgcgacg
     6721 aggtgccgcg ggtactcgct tggcctcctg ggcgctgagc ggcgtcatgt tcgcgaacgg
     6781 attgggtcac ctgggtgggt cgttgtactt cggaaagtgg ttgccgggaa ccacctcagc
     6841 cccgctcctg ctattcgcaa gcggtttgct ggcgcgccgg acgtggcaaa ggggggtagc
     6901 gacacgaagc ccggcacggt gctgatcgga agctacggct gccgcccgat gtctcgcagg
     6961 cgtcctcgcg cctcggcatt cgatgaatcg cgacggaccg cctcgcggaa tgcgccggct
     7021 gcgccggccg tgtccccttg catgaggtgg atattccccc ggaagacgta catgggggag
     7081 gagcccggga acagttcctc attgaggcgt agcagcgcga aggcggcgtc gaaccggctg
     7141 gcccgcccca ggcggaaggc cgcgatgttg agcgacgtct ctccgaaatc ataggcatcg
     7201 cggccgtaat accgctcccg cagggcgcgg tagccgcgga tggcggaatc gccgccgccg
     7261 gcgagtgccg cgtccaccat cagcgtgaag agcggcacgg gtcggctggt cccgcggtgg
     7321 caggtgctgc aggtcacttc gagccccggg ctggtgcggc ccgggagcgt gtcgatccgg
     7381 cgattgactt cctggaccag acgcatcatc tggcgggcaa cgagtttggt gcgcttctcg
     7441 tcactggcga aatcgaactg ctcgagcggc atcccttccc gcccgacgtg gcagaactgg
     7501 caccgcacgc ccaggccgcc ggcaatgttc cgcatcatcc cgactacctg cgttaccggc
     7561 gtcgtgcggg gaatgacctg ggtattcacc agggagtccg ggggccagcg acccggtgcc
     7621 tgggcccaga gcccgctgga gagtgtcaca aggctgacgc cgaccagaac gagtcgcatg
     7681 gtggggcctc ggcaccgctg gtgagttacc acggtctacg cacagagtac gttggacggc
     7741 tgccgtccgg gtgggcgtgc ggtccggatg atgtcaggaa accgtaagga aagcgcccca
     7801 gcgtcccccg acactccgac tgtcgggcct gtcgccgaaa agcgggggtc gcagtaccct
     7861 tccagtcgga attctcgaac aaggactcat gcatgctgac cgctctcgca ttgggcctcc
     7921 tcggcgtcgc cgtcatgcag gataccgtcc gtttcacccc cacgatccag caaccgacgt
     7981 tcgccgtgcg tgatccggtg ctccggatca agcccgggac ggtgctgatc agcaagacca
     8041 acttcggggc ctactatacc ctgcagggcg gcgcgttccc gggtgaagtg ggcccgttcc
     8101 tgatcgaggg cgctaccacc cgcgatatgc tcaaggtcga ggtgatccgg gttcggccca
     8161 accatcgcta tgcggcgtcc cagctctatc gcgatttcgg cggcctgtcg accgagagcc
     8221 gggtgcggtt tctcaacgag gcgatccctc ccaagcgtta cctgtgggag ctggacacgg
     8281 tccggatggt cggcaccacg cccatgccga acagccggat cggcaagatg gagctggacc
     8341 tgcagcccat gctgggacgg gtggcggtgg cgccccgcgg cgccgaggcc ttcgccggca
     8401 tctggcccgg cgatttcggc ggcaacatgg acgcgcccga agtgcgcgaa ggaactacgg
     8461 tgtacctgcc catcttccat gacggggcct acttctactt cggcgacggc cacgcccggc
     8521 agggcgaggg cgaggtcaac ggcaccgggc tcgagaccag catggatgtc gtgctcaaga
     8581 ttgacctgat caagggcaag accatcgact ggccccgact ggaggatcgc gatcacatca
     8641 tggtggctgg cagcacccgg ccgctgatcg acgccttccg tctggcccac gtcgagctga
     8701 tcgagtggct ggtggaggag tatggcttcg acaagtggga cgcctacacc ctgctgggcc
     8761 aggcggcgga aagcaccgtg gccaacatcg tggaccccaa ctacaccgtc atcgccaaga
     8821 tcaagaaacg ctacctcccg cgctagcggc gggtcttacg ggtgcaccgg aaggtggggg
     8881 gctgaaatgg ccagttccag gttccgggtt ccaggtgcct cgtgcggtgc tgcgtgcggt
     8941 gccgagtgca aggtgctgag tgcttccgat cggctggctc cgtctcaggt gcgcggcctc
     9001 gcatcgcact cagcactcgg cacgtagcac cgcactcagc accgcacccg gcaccaggaa
     9061 cccggaacct ggaactggtt ccttagtgcc tacagccgat gatccgtaat ggctcctccc
     9121 ccccttcgct caccagcagc agttgggagg agctgagcca ggcgattccc tccccctgtc
     9181 gttcccgtaa tggctcgata ttgcagacta cgggccggac ccaggtttgc atgcgcccgg
     9241 ccgtatccgc ggcgaacagg tagacctggt cgtaggtccg caccgccacc tgccggccat
     9301 cgggtgacag tgccgcatcg gtgatgagcc gccccggccg cgaaccgggg atcacgggaa
     9361 ggctgtcgac cagtcgagcc tgcgccaccg agtccggctt gccccacgcc gccggcgaca
     9421 cagcgaacac cagggccggt cgaggcctgc cggccgaatc ggtcaagcgt cgcttagtaa
     9481 tcaggtagac ggtgccgtcc ggagcgacat acatggcctc gacgtcgtgc ggcccgtcct
     9541 ggtacgtgaa cctcagacgc tcggccctga cccgccccgt gtagcccgat ccccgcgccg
     9601 tcggctccgg catccgatag agcgcgcgcg aaggatactg cgcggcattg tcccctacat
     9661 ccccgatgta gaggcaacgg tcaggcggcg ccttcgcgcc gagccggcca tcccccgagg
     9721 gacagggtcc gggagaggcg gcttcccagt cgatgttgtt ggcggaatca acctgccagg
     9781 cgccccgatc gttgccggcc gtgtcgacgg caaacagcat tgggtcgtga cccgaatcgt
     9841 tcatcaggaa caccacgccc ggctgagtgg cgctcacgat cgcgcccgag gcctcgacca
     9901 ggtcctcgcg caggcgcacg gggatctccc tggcggagac tggcagcccc tgggattcgg
     9961 catccggagc accggcggat ccatcgcccc gaaaatcgcg agcgggactg caggcgaacg
    10021 caccggcccc ggccagacct atcaggaccg tgaatctccg ggtcatccgg ccccggaggg
    10081 gcttccggcc gcccgacccg agcgcaccag atgttctcgg agcgcctcca ccgcctgggc
    10141 gcagtcgcgc cgtccgaacc cgatccggaa gcgatcgcgc gccaccggca gcagccggga
    10201 ctggaacagg ctcgcaggca ggagaatcac accggcctcc tcaaccgcgg aacggcagaa
    10261 ctcctcgacc ccgtcctcgc ccagataacg ggggaaagcg acacaggcgc cctcgggcgt
    10321 gtaccactgg aagagatcgg ggagttcgtc aaagaagccg gcgaggagct cgaggttctg
    10381 cgccgtgatg ccgcgagttc gttccagaat ccggcggctg gcgcggagcg ccaccgtcgc
    10441 cagcagctcg ctgggagcgg gacacgcgat cgagagatag tgcttgaccc gttccatccg
    10501 ggacagggcg tcggtatccc ggctggcgat ccatccgatc cggagccccg gcaggcccaa
    10561 cgacttggac atcacgccga gcgagagtcc ccgctggtag agcatcgcgg cgggaggcaa
    10621 cgtactcgcc gggttccgct ccagaccccg atacacctca tccgacaaca gatagaggtc
    10681 gcgctcggtg gcgagctgga ccagcgcctg gaagatctcc ggcgcgatga cttttccggt
    10741 aggattatta gggaaattga tcgcgatgag acgggtgttc ggccggaggg
//
LOCUS       DASWKS010000624         4808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_707559, whole genome shotgun sequence.
ACCESSION   DASWKS010000624 DASWKS010000000
VERSION     DASWKS010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4808
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707559"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1452)
                     /locus_tag="VGA78_17820"
     CDS             complement(37..1452)
                     /locus_tag="VGA78_17820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9895795.1"
                     /translation="MTDTSPLANRNTGFWSAVREAIAGSRQDYTEGPIGRAVLLLAIP
                     MVLEMFMESLFAVVDIFWVSRLGADAVAVVALTESMLALVYTVAMGLSIGVAATVARR
                     IGEHDRERAALTAVQGIGVGIIAAAVFGVAGALLAPQLLQLMGASPSVIESGSRFTRI
                     MLGGNGAILLLFLINAVFRGAGDAAIAMRVLWFANAINMLLGPCLIFGLGPFPEMGVT
                     GAAAATTFGRSMGVMYQLWSLARKSERVRLTLHHLRLVPAMMIQLVRLSATGMLQVLI
                     GTASWIALVRLLSTFGSNALAGYAISIRVVLFTLLPAWGLSNAAATMVGQGLGARKPD
                     RAERAVWIAGGYNLVFLGTVGLLYFLFASTIISWFSTDPEIHQYATQSLRVISLGFPM
                     YAYGMVLTQSFNGAGDTWTPTLINLACFWCWEIPLAIGLATRGGFGPMGVFVSIAVAF
                     STLAVVSAVVFRRGKWKSREA"
     gene            1504..1923
                     /locus_tag="VGA78_17825"
     CDS             1504..1923
                     /locus_tag="VGA78_17825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 domain-containing protein"
                     /protein_id="HEX9895796.1"
                     /translation="MSPDAGYSGKPLVTKLGIKPGHRVHLAGAPPGFALQQLPSDVDL
                     MGPTARSLDLILLFVKEARVLRAAFPRQADRLTPPGMLWISWPKKASKVATDLTEDRV
                     REIGLAVGWVDVKVCAVDDTWSGLKFVRRLANRTPKQ"
     gene            1955..2353
                     /locus_tag="VGA78_17830"
     CDS             1955..2353
                     /locus_tag="VGA78_17830"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEX9895797.1"
                     /translation="MNKVLFVCIENSNRSQMAEAFARMHGAGLVQPASAGSRPSGRIN
                     PKAIAAMAEKGYDLTTHESKSLDQVGAGPWDYVVTMGCGDECPWIPAPARLDWDLPDP
                     KDLPEMEFRAVRDDIEQRVIDLLATIGRKN"
     gene            2419..3573
                     /locus_tag="VGA78_17835"
     CDS             2419..3573
                     /locus_tag="VGA78_17835"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9895798.1"
                     /translation="MLDGMDVMLYAFALGSIQQEFGLTGAQAGALASVTLLSSAFGGI
                     GVGILADRYGRARLLRWAVVSYSVFTALTATATSVWQLVLWRTLLGFGMGGEWSAGSV
                     LVAETWPARHRGKAIGVMQSGWAVGYILAATLAAAVIPRFGWRPLFLFGLLPAVLAFW
                     IRRNVPEPAKWQPTAAGTRWSHALRAMFTPPLLGRTVTATVIATFLLFAYWGLFTWVP
                     RFLAAPVESGGAGMGIVRSSGWIVPMQLGALAGYLSFGFLADRFGRRPVFLIFVLCSA
                     VIVPLYGGAARDATLLLLLGPLVGFFGHGYFSVFGAMLAELYPTAIRGTAQGTCYNAG
                     RAVSALAPYSIGAIADARGLGPALGFTALFYVAAGALIWRLPETKGRELE"
     gene            complement(3741..4292)
                     /locus_tag="VGA78_17840"
     CDS             complement(3741..4292)
                     /locus_tag="VGA78_17840"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HEX9895799.1"
                     /translation="MMRLISGLVLLLVACGGGIAVNTDYDPLASPRMESFKAWSWLQH
                     PGGPDTRPDTVVATEVAPAIERTLTALGYRKDDANPEFRVGWHALRDQAVDVTTVNAY
                     YGYAYGRWFPGGGVAYSRGFRTEYEPGTLVLDVADARTNELIWRGIARQVFGKNDATE
                     QSRLLNEAITRLFAQFPPSRPNN"
     gene            4342..>4808
                     /locus_tag="VGA78_17845"
     CDS             4342..>4808
                     /locus_tag="VGA78_17845"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX9895800.1"
                     /translation="MTITLGAFERLDQRHRTLLTVAALVVIAYGIRAAASVLDSLLLA
                     CLLTVAVLPAFELLRRRGMSKGLATAITSVLLVGIALALLGFLAVSGTQLVQVLPGYQ
                     EKVEALRQTLVASLIQRGIEPEQVLSLDLISPARVLGLAAGVLSGAGKVLSQAL"
BASE COUNT          784 a         1538 c         1641 g          845 t
ORIGIN      
        1 attgtcaatc atcaattgtc aatcgacaat ggaagttcag gcctctctgg atttccattt
       61 tcctcgtcga aagacgacgg cggagacgac ggccagagtc gagaacgcca cggcgatcga
      121 gacgaacaca cccatgggtc cgaacccgcc tcgggtggcg aggccgatcg cgagaggaat
      181 ctcccagcac cagaagcagg ccaggttgat cagggtcggg gtccaggtgt cgcccgcgcc
      241 gttgaaggat tgggtgagca ccatgccgta ggcgtacatc gggaagccga ggctgatcac
      301 ccgcagcgac tgggtggcgt actggtggat ctccggatcg gtgctgaacc aggagatgat
      361 ggttgacgcg aacaggaagt acagcagccc caccgtcccc agaaacacca ggttgtatcc
      421 gccggcgatc cagaccgccc gttccgcccg gtcgggcttt cgcgcgccga ggccttgtcc
      481 caccatggtg gcggcggcgt tgctcagacc ccaggccggc agcagggtga agaggaccac
      541 gcgaatggag atggcgtagc ccgccagtgc gttgctgccg aaggtcgaga gcagccggac
      601 cagggcgatc cagctcgcgg tgccgatcag cacctgcagc atgcccgtgg ccgagagccg
      661 caccagctgg atcatcatcg ccgggaccag gcggaggtgg tgcagcgtca gccgcacccg
      721 ttcgctcttt cgggccaggg accacagctg atacatcacc cccatgctgc ggccgaaggt
      781 ggtcgccgcg gccgcgccgg tgacgcccat ctccggaaac ggtcccaggc cgaagatgag
      841 gcagggaccg agcagcatgt tgatggcgtt ggcgaaccag aggacccgca tggcgatggc
      901 ggcgtcgccg gcgccccgga acaccgcgtt gatcaggaac agaagcagga tggccccgtt
      961 gccgcccagc atgatccgcg tgaacctgct gcccgattcg atgaccgagg gcgacgctcc
     1021 catcagctgg agcagttgcg gagccagcag cgcccccgcc acaccgaaga cggccgccgc
     1081 gatgatcccc acgccgatac cctggaccgc ggtgagcgcg gcacgctcgc ggtcgtgctc
     1141 tccgatccgt cgcgccaccg tcgcggcgac cccgatgctc aaccccatgg ccacggtgta
     1201 gaccagcgcc agcatcgact cggtgagcgc caccaccgcc accgcgtccg cccccagccg
     1261 tgagacccaa aaaatgtcca ccaccgcgaa cagcgattcc atgaacatct cgagtaccat
     1321 cgggatcgcg agcaggagaa ccgcgcggcc gatgggccct tccgtgtagt cctggcggga
     1381 accggcgatc gcttcccgta ccgcggacca gaagccggta ttgcgattcg ccaagggcga
     1441 agtgtcggtc accagaggat cagccatatc gtggggtcag agccggagca atatattggg
     1501 gccgtgagcc ctgacgcggg ttacagcggc aaaccgctgg tcaccaagct cggtatcaag
     1561 ccgggtcacc gagtgcacct ggccggagcc ccaccgggct tcgccttgca acagttgccg
     1621 tccgatgtcg atctgatggg cccgaccgcc cgctcgctcg atctgatcct gctgttcgtg
     1681 aaggaagcca gggtgcttcg cgccgccttc ccgcggcagg cggatcggct caccccgccc
     1741 ggtatgctct ggatctcatg gcccaagaag gcgtccaagg tcgccaccga tctgaccgag
     1801 gaccgggtgc gcgagatcgg tctggccgtg ggctgggtcg atgtcaaagt ctgcgcggtc
     1861 gatgatacct ggtcggggct caagtttgtt cgccgcctcg caaaccggac tccaaaacag
     1921 tgaacagtga acagtcaacg gttaacgggt aacagtgaac aaggtcctat ttgtctgcat
     1981 tgagaattcc aaccggagcc agatggctga ggcgtttgcg cggatgcatg gcgcggggct
     2041 ggtgcaaccc gctagtgcgg ggtcgcggcc ctcgggccgc atcaatccca aagcgatcgc
     2101 ggccatggcg gagaagggct atgacctcac gacccacgaa tccaagagtc tggatcaggt
     2161 gggggccggg ccctgggatt atgtcgtgac catggggtgc ggggatgagt gcccctggat
     2221 tccggcgccc gcccggctcg actgggatct gccggatccg aaggatctgc ccgaaatgga
     2281 attccgggcg gtccgagatg acatcgagca gcgggtgatc gacctgctgg caacgatcgg
     2341 gcggaagaac tgacgcgctg gtggcgtgag gtcggaccgg tagaacaccg cgccctcatc
     2401 gcgggcacgg ccggctggat gctcgacggc atggacgtga tgctctacgc ctttgccctc
     2461 ggctcgatcc agcaggagtt cggtctcacc ggcgcccagg ccggtgcgct ggcctcggtg
     2521 acgctgctgt cctcggcgtt cggcgggatc ggggtgggca tcctggccga ccggtacggt
     2581 cgggcccgac tgctccgctg ggcggttgtg tcctactccg tgttcaccgc gcttaccgcc
     2641 acggccactt cggtgtggca attggtcctc tggcgcacgt tgctcggttt cggaatgggt
     2701 ggcgaatggt cggcggggtc ggtcctggtg gccgagacct ggccggcgcg gcaccgcggc
     2761 aaggcgatcg gggtaatgca gtcgggttgg gccgtcggct acatcctggc cgccaccctc
     2821 gcggcggcgg tgattccccg attcggctgg cgaccgctct ttctattcgg tctgctgccg
     2881 gcggtgctgg cgttctggat ccggcgcaat gtgccggagc ccgcgaaatg gcagcctacc
     2941 gccgccggga cgcgctggtc ccatgcgctc cgcgccatgt tcacgccgcc gctgctgggc
     3001 cggaccgtga cggcgacggt catcgcgacc ttcctgctgt tcgcctattg gggtctcttc
     3061 acctgggttc cccggttcct tgcggcgccg gttgaaagcg gcggtgcggg gatggggatc
     3121 gtgcgctcgt cgggctggat cgtgccgatg cagctgggcg ccctggcagg gtatctgtcg
     3181 ttcgggttcc tggccgaccg gtttgggcgc cggccggtgt ttctgatctt cgtgctatgc
     3241 tcggcagtga tcgtgccgct ctatggcggt gccgcacggg acgccacctt gctgctgctg
     3301 ctcggtcccc tggtggggtt cttcggccat ggctacttca gcgtgttcgg cgcgatgctg
     3361 gcggagctct accccaccgc catccgcggc acggcgcagg ggacctgcta caacgcgggc
     3421 cgagccgtgt cggcactggc gccgtactcc atcggcgcga tcgcggacgc ccggggactg
     3481 ggtccggccc tcggcttcac ggcgctgttc tatgtggcgg cgggagcact gatctggcgg
     3541 ctgccggaaa ccaaaggcag ggagctcgag tagcgggttt tccggatcct cggtcgcaaa
     3601 ggctagccac ggatcacacg gatcacacgg attacccgga ttacgcggat tcaactacat
     3661 cattttttat gtcggttgtg tgcccaaatc cgtgtaatca gtgtaatccg tggattgctt
     3721 tggtagcgcg actcgcagct ctagttgttg ggccggctgg gtgggaactg ggcaaacagc
     3781 cgagttatcg cctcgttcag caggcgggac tgctcggtgg catcgttctt tccaaacacc
     3841 tggcgcgcaa taccgcgcca gatcagctcg ttggtgcggg cgtccgcgac gtccagcacg
     3901 agcgtccccg gctcgtattc ggtgcgaaag ccccgggagt aggccactcc tccgccggga
     3961 aaccagcggc cataggcgta gccgtagtag gcgttcacgg tggtgacgtc caccgcctga
     4021 tcgcggaggg catgccagcc gacccggaac tcggggttcg cgtcgtcctt gcggtaaccc
     4081 agcgcggtca gggttcgctc gatggccggc gctacctcgg tggccaccac cgtgtcggga
     4141 cgggtgtcag gtccaccggg gtgctgcagc cagctccacg ccttgaagct ctccatccgc
     4201 gggctggcca gcgggtcata gtcggtgttc accgcaatac ccccgccgca tgcgacgagg
     4261 agcagaacca gcccggagat gagtcgcatc atggaggaag tctataattg aatcgtcgcc
     4321 ctctccagcc gaggcaggcc catgacgatt acgctaggtg cgttcgagcg gctggatcag
     4381 cgccaccgca ccctccttac cgtcgccgcc ctggtggtca tcgcgtatgg catccgggcg
     4441 gccgcgtccg tgctggacag cctgttactg gcctgcctcc tgacggtggc ggtcctgccg
     4501 gccttcgagc tgctccggag gcggggcatg tcgaagggcc tcgcgaccgc catcacctcg
     4561 gtgctgctgg tggggatcgc gctggcgctg ctggggttcc tggccgtgag cgggacccag
     4621 ctggtgcagg tgctgcccgg ataccaggaa aaggtcgaag cgctgcggca aaccctggta
     4681 gcgagcctga tccagcgagg gatcgagccg gaacaggtgc tgtcgctcga cctgatcagt
     4741 ccggcccggg ttctcggtct cgcggccgga gtgctgtcgg gggccgggaa ggtcctcagc
     4801 caggcgct
//
LOCUS       DASWKS010000625         6266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3635894, whole genome shotgun sequence.
ACCESSION   DASWKS010000625 DASWKS010000000
VERSION     DASWKS010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3635894"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VGA78_17850"
     CDS             complement(<1..205)
                     /locus_tag="VGA78_17850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895801.1"
                     /translation="MSVKLAIDAATDRLSVAAGRAGADPVERVLTGPRHHAGALLGMI
                     EEVLHALRAGKTDLDLVVVADGPG"
     gene            complement(202..630)
                     /gene="tsaE"
                     /locus_tag="VGA78_17855"
     CDS             complement(202..630)
                     /gene="tsaE"
                     /locus_tag="VGA78_17855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX9895802.1"
                     /translation="MTSPLTEAGLTQLGHRLGRSLPSGAVVWLEGPLGAGKTTLVRAI
                     LESRAPERAVTSPTFNLVHRHEGRQGAAFHVDCYRLRHPAEAAELDWSEMLGADLLLI
                     EWPDRGGCWVPSPTLRIQLDHASQPDQRTVSLDPPLGNDP"
     gene            complement(627..2663)
                     /gene="uvrB"
                     /locus_tag="VGA78_17860"
     CDS             complement(627..2663)
                     /gene="uvrB"
                     /locus_tag="VGA78_17860"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEX9895803.1"
                     /translation="MPSFEVEAPFQPAGDQPRAIAQLTDAIRAGGRYHTLLGVTGSGK
                     TMTLAHVLARIGRPTLVLSHNKTLAAQLYGELKQFLPRNAVEYFVSYYDYYQPEAYVP
                     STDVYIEKDASINEDIERLRLRATSSLMERDDVVIVATVSAIYGLGDPVTYRQLMLSV
                     AVGEQRGRDAILRDLVAIQYDRNDASFEVGTFRVRGDTIEIFPAYEEQAVRIELWGDE
                     VERISKIHPLTGEVIQQLERCAIYPATHFVTERPTIERAVKIIRAELAERLMEFRTAG
                     KLLEAQRLESRTNFDIDMLLEIGTCPGIENYSRHLTGRREGERPACLIDYFPPDYLVV
                     VDESHVTLPQIGGMYNGDRARKETLVEYGFRLRSALDNRPLRFDEFMGLAPRIINVSA
                     TPGELELNLSQGAVVEQINRPTGLLDPEVEVRPVKGQVDDLLREIRDRVVQHERVLVT
                     TLTKRMSEDLTDYLQQAGVRVRYLHSDIDTIERVEILRGLRLGEFDVLVGINLLREGL
                     DLPEVSLVAILDADQEGFLRSDRSLIQTVGRAARHLNGRAVLYADRMTGSMRRALDEM
                     DRRRALQREFNRTHGITPASIVKSLEQTRLTTRVADARMEKPLRREAARTPDLHDPAQ
                     RAAYIQALERQMREAAANLEFELAALLRDQINDLRAVSAPDVRRGGLGRSKLRA"
     gene            complement(2693..3091)
                     /locus_tag="VGA78_17865"
     CDS             complement(2693..3091)
                     /locus_tag="VGA78_17865"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEX9895804.1"
                     /translation="MSYFLLKTEPSTYSWDDLVRQGRAVWDGVKNPAALNHLRAMQPQ
                     DRAFIYHTGDEKAVVGIAKVLSRAYPDPKAKDPKLMVVDLEPVKKLARPVTLASVKAD
                     RWFQDFALVRVPRLSVMPVTQEQWERILEM"
     gene            complement(3290..5476)
                     /locus_tag="VGA78_17870"
     CDS             complement(3290..5476)
                     /locus_tag="VGA78_17870"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEX9895805.1"
                     /translation="MSPEMVTELPAEFRAALDKHADRLDRDLIERALRFSVSAHRGQK
                     RMSGEAFVSHAIAVATILLSQLLDTTSIAAALLHDVAEDTDVRLDDVAEQFGPEVAGL
                     VEGLTKISSLTFRSTTEAQVENYRKLLLSIAKDARVIIIKLADRLHNMRTLEHLTPER
                     RRRIALETREIYAPLAHRFGMAGIKAELEDLAFKFLEPEDYRALADQLAARRAEREQM
                     IQTLRIPLESELHRAGVKEFEVTGRPKHLWSINQKMKRRGTPLEQIYDMMAVRVLVPS
                     VPECYHVLGVLHHRWTPLQERFKDYIASPKSNGYQSLHTTIFGPGGHLFEVQIRTQDM
                     HRTAEYGIAAHWLYKTDRHRPDELDRHFGWFRQLLELQQDTASPEEFLEFLKVDLYQD
                     EIFVFTPAGDVKRLPKGATAIDFAFHVHTDVGLRCQGAKINGRIAPLHRELKNGDTVE
                     ILTGPQPRPSRDWLSHVATGRARHKIKQWIKHEEETVSQQLGRDILAREVRRRRLAMP
                     DQDALERAAPAVNLLSAEALEIAIGRGDVGIAQVMRSLYPDLPEMELEAPKPNVFGRL
                     VDRWRMGRGIKIQGVDGLMVRYAQCCQPVPGEAVVGYVTQGRGISIHRADCPNLLTLE
                     GSDRRVEIDWKEVEGESFAVRLVLNAEDRRGLYADIMSAISQSGTNIRRADLHTKDGS
                     AFGTILVEVDNLPHLDKVLKTIRKVKGVHTIERRDLSPTTGSSTPS"
     gene            complement(5649..>6266)
                     /gene="radC"
                     /locus_tag="VGA78_17875"
     CDS             complement(5649..>6266)
                     /gene="radC"
                     /locus_tag="VGA78_17875"
                     /inference="COORDINATES: protein motif:HMM:NF000642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEX9895806.1"
                     /translation="PAVLLTEELVALVLGTGRPGEDVLEVARALLEAGAGSLRRLAAR
                     PPGELQRVGGVGPAKAARLMAALELGSRLARELRPPAPRIRSPEDVLQVVSPRLRDLT
                     AEEFHVLALDTQSQVLRDVTVTRGLLDSSLVHPREVFRAAIAEAAAGVILVHNHPSGD
                     PTPSAEDRAVTRQLVAAGQLLDLPVYDHVIVAGDRWVSLAQAGLL"
BASE COUNT          997 a         2095 c         2107 g         1067 t
ORIGIN      
        1 tgccgggccc atcggcgacc accacgaggt cgaggtccgt tttccctgct cgcagggcgt
       61 gcagcacctc ttcgatcatg ccgagcaatg cgccggcgtg atgacgcggg ccggtcagca
      121 cccgttccac cgggtccgcc ccggcccggc cggcggcaac cgacagccgg tcggtcgcgg
      181 catcgatcgc cagcttcaca ctcatgggtc atttccgagc ggcggatcga gactgaccgt
      241 ccgctgatcg ggctgggagg catggtccag ctggatgcgc agggtcgggg acgggaccca
      301 gcagccgccc cggtccggcc attcaatcag cagcagatcg gcccctagca tctcgctcca
      361 atccagctcg gcggcttcgg ccggatggcg caggcgatag cagtcgacgt gaaaggccgc
      421 tccctgccga ccttcgtgcc ggtgcaccag gttgaaggtg gggctggtga cggctcgttc
      481 cggggcgcgg gactcgagga tggcgcgaac cagtgtggtc ttccccgccc cgaggggtcc
      541 ctccagccag accaccgcgc cggaagggag cgaccgaccc agccggtggc ccagctgagt
      601 caagccggct tcggtgagag gggaggtcac gcccgcagtt tcgatcggcc caagccgccg
      661 cggcgcacgt cgggagcgct cacagcccgc agatcgttga tctgatcgcg cagcagcgcg
      721 gccagctcga actcgaggtt ggcggcggct tcgcgcatct gccgctccag cgcctggatg
      781 taagccgccc gctgcgccgg atcgtgcaga tcgggagtgc gagcggcctc ccggcggagc
      841 ggcttctcca tccgcgcgtc cgcaacgcgg gtggtgagcc gggtctgctc cagcgatttg
      901 acgatcgacg cgggcgtgat gccgtgggtc cggttgaatt cgcgctgcag cgcccgccgc
      961 cggtccatct cgtcgagagc ccgccgcatg gagccggtca tccggtcggc atacaacacc
     1021 gcccggccgt tgagatggcg ggcggcccgg cccacggtct gaatcaggga tcgatcggaa
     1081 cgcaggaaac cttcctgatc ggcgtccagg atcgccacca gggacacctc gggcagatcc
     1141 aggccctcgc gcagcaggtt gatccccacc aggacgtcga actcgcccag ccgaagcccc
     1201 cgcaggatct cgacccgctc gatggtgtcg atgtcggagt gcagataccg cacccgcact
     1261 ccggcctgct gcaggtagtc ggtgagatcc tccgacatgc gcttggtgag cgtagtcacg
     1321 agtacccgct cgtgctgcac cacccggtcg cggatctccc gcaggagatc gtccacctgg
     1381 cccttgaccg gccgcacctc gacctcggga tccagcaggc cggtggggcg gttgatctgt
     1441 tccaccacgg cgccttgcga gagattcaat tccagctcgc ccggggtggc ggagacgttg
     1501 atgatccggg gggccaggcc catgaactcg tcgaaccgga gcgggcggtt gtccagcgcc
     1561 gagcggagcc ggaagccgta ttcgaccagg gtttccttgc gggcccggtc gccgttgtac
     1621 atcccaccga tctggggcag cgtcacgtgg gactcgtcga ccaccaccag atagtcgggc
     1681 gggaagtagt cgatcaggca ggccggccgt tcgccctccc gccgtccggt gaggtggcgg
     1741 gagtagttct cgatcccggg acaggttccg atctcgagca gcatatcgat gtcgaagttg
     1801 gtccggctct cgagccgctg ggcctcaagc agcttgcccg cggtgcgaaa ctccatcagc
     1861 cgctcggcca gttcggcccg aatgatcttc accgcccgct cgatggtggg ccgctcggtc
     1921 acgaagtggg tggcgggata aatggcgcag cgctccagtt gctggatcac ttcaccggtg
     1981 agcggatgga tcttgctgat ccgctccacc tcgtcacccc agagctcgat ccggaccgcc
     2041 tgctcctcgt aggccgggaa gatctcgatg gtgtcgcccc gaactcggaa ggtgccgacc
     2101 tcgaaggagg cgtcgttccg gtcgtactgg atggccacca ggtcccgcag gatggcgtcc
     2161 cggccgcgct gctcgcccac cgccaccgag agcatcagct ggcggtaggt cacgggatcg
     2221 cccaggccgt agatggcgct caccgtggcc acgatgacca cgtcgtcccg ttccatgaga
     2281 ctggaggtgg cccgcagccg cagccgctcg atgtcctcgt tgatggaggc gtccttctcg
     2341 atgtagacgt cggtcgaggg gacgtaggct tcgggctggt agtagtcgta atacgagacg
     2401 aagtactcga ccgcgttccg gggcaggaac tgcttgagct cgccatagag ttgagcggcg
     2461 agggtcttgt tatgggacag caccagggtc gggcggccga tccgggccag cacatgggcc
     2521 agcgtcatgg tcttgcccga cccggtgacg cccagcagcg tgtggtagcg cccgccggcg
     2581 cggatcgcgt cggtcagctg ggcgatggcc cggggctgat ctccggccgg ctgaaagggg
     2641 gcctcgactt caaaactggg cattccggaa aactagtcgc ggccactcga gactacatct
     2701 ccagaatgcg ctcccactgc tcctgggtca cgggcatgac cgacagccgt gggacccgca
     2761 ccagcgcgaa gtcctggaac cagcgatcgg ctttcaccga agccagcgtg accggccggg
     2821 ccagcttttt caccggctcg aggtccacca ccatcagctt cgggtccttc gccttgggat
     2881 ccgggtaggc ccgggagagc accttggcga tcccgaccac tgccttctcg tcaccggtgt
     2941 gatagatgaa ggcccggtcc tgcggctgca tggcccggag atggttgagg gcggcggggt
     3001 tcttcacccc gtcccagacg gcccggccct ggcggaccag gtcgtcccag gagtacgtcg
     3061 atggttcggt cttgagaagg aagtaggaca tggtcgatga ggattggggt cgactaccgg
     3121 tgccggggcg cctccaatcg tcaaccgtcg aacggccagc gtcaatggcc ggcggccgtg
     3181 tccgcagacg ttcgaactcg gcggcgggat ccacgactaa cgcccaaccg ggcaggaact
     3241 ccgccgagtg accgtcaacc agattgacat tcgtgacgat tggatagggt caggagggag
     3301 tgctggagcc ggtggtgggg ctcaagtcgc gccgttcgat ggtgtgcacg cccttcacct
     3361 tccggatggt cttcaggacc ttgtcgagat ggggcaggtt gtcgacttcc accaggatgg
     3421 tcccgaaggc ggagccatcc ttggtgtgca ggtcggcccg gcggatgttg gtaccgctct
     3481 gactgatcgc gctcatgatg tcggcataga ggccccgccg gtcttccgcg ttgagcacca
     3541 gccgcaccgc gaacgactcg ccttccacct ctttccagtc gatctccacc cgccggtcgc
     3601 tgccctccag ggtcagcagg ttggggcagt cggcccggtg gatggagatc ccgcggccct
     3661 gggtcacgta tcccaccacc gcctcgccgg gcaccggctg gcagcattgg gcgtagcgca
     3721 ccatcaaccc gtcgactccc tggatcttga tgccccgccc catccgccag cgatccacca
     3781 gccggccgaa gacgttcggc ttgggcgcct ccagctccat ctcgggcagg tcgggataga
     3841 gcgagcgcat cacctgggcg atgccgacgt cgccccggcc gatcgcgatc tcgagcgcct
     3901 cggcactgag taggttcacc gccggcgcgg cccgctccag cgcgtcctga tcgggcatcg
     3961 ccagccgccg gcgccgcact tcccgggcga ggatgtcgcg acccagctgc tgcgagacgg
     4021 tctcctcttc gtgtttgatc cactgcttga tcttgtgacg ggcccgcccg gtcgccacgt
     4081 gggacagcca gtcgcggctg ggccggggct gcgggccggt gagaatctcg accgtatcgc
     4141 cgttcttgag ctcgcggtgc aggggcgcga tccggccgtt gatcttggcg ccctggcagc
     4201 ggagtcccac gtcggtgtgg acatgaaagg cgaagtcgat ggcggtggcg cccttgggga
     4261 gccgtttcac gtcgcccgcc ggggtaaaga cgaagatctc gtcctggtac aggtcaacct
     4321 tgaggaattc caggaattcc tcggggctgg ccgtatcctg ctgcagctcc agcagctgcc
     4381 ggaaccagcc gaagtggcgg tccagctcgt cgggccggtg ccgatcggtc ttgtagagcc
     4441 aatgggccgc gatgccgtac tcggcggtcc ggtgcatgtc ctgggtccgg atctgcactt
     4501 cgaacaggtg gccgccgggg ccgaagatgg tggtatgaag cgactggtac ccgttggact
     4561 tgggactggc gatgtagtcc ttgaaccgct cctgcagcgg ggtccagcgg tgatgcagca
     4621 cgcccagcac gtgatagcac tcgggtacgc tgggcaccag gacccgcacc gccatcatgt
     4681 catagatctg ctccagagga gtcccgcgcc gcttcatctt ctgattgatc gaccagagat
     4741 gcttgggccg cccggtcacc tcgaactctt tcacgccggc gcggtgcagc tccgattcca
     4801 gcggaatccg gagggtctgg atcatctgct cccgttcggc ccggcgggcc gccagctggt
     4861 cggccagggc gcgatagtcc tccggctcca ggaacttgaa tgcgagatct tccagctccg
     4921 ccttgattcc cgccatgccg aagcgatgcg ccagcggagc gtagatttcg cgggtttcca
     4981 gcgcgatccg ccggcggcgc tccggggtca ggtgctccag agtgcgcatg ttgtgcagcc
     5041 gatcggccag cttgatgatg atgacccggg cgtccttcgc gatcgacagc agcagcttgc
     5101 ggtagttctc gacctgggcc tcggtggtcg agcggaaggt gaggctcgag atcttggtca
     5161 ggccctccac cagcccggcc acctcggggc cgaactgctc cgccacatcg tccagccgga
     5221 cgtcggtgtc ttcggccacg tcatggagca gcgccgcggc aatcgaggtg gtatcgagca
     5281 actggctcag caggatggtg gcgaccgcga tcgcgtgcga aacgaacgcc tcgccgctca
     5341 tgcgcttctg gccccgatgg gcggaaaccg agaaccggag cgcccgctcg atcagatcgc
     5401 gatcgagccg gtccgcgtgc ttatccagcg cggcgcgaaa ctcggcgggg agctcggtga
     5461 ccatctcggg actcatcctt acaaggatac ctggtccccg gaagggggga aataaggtgg
     5521 gaagggtcgg aaaacagggt cgtaagggtc ggaatattgc ccgttgttgc cgttcctact
     5581 ctcttttacg accctgtttt ccgacccttc cgaccctgtt tttccaccct tccgaccctg
     5641 gttgccccct acaagagtcc tgcctgtgcc agagagaccc atcggtcccc cgccactatg
     5701 acgtggtcgt agaccgggag gtccagcagc tgaccggccg ccaccagctg tcgggtgacc
     5761 gcccgatcct cggccgacgg ggtgggatcg ccagaggggt ggttgtgtac cagaatcaca
     5821 ccggcggccg cctcggcgat ggcggctcgg aagacctccc ggggatggac cagggagcta
     5881 tccagcagac cccgtgtaac ggtgacgtcc cggagcacct ggctctgcgt gtccagcgcc
     5941 agtacatgga actcctccgc ggtcagatcc cgcagcctgg gactgacgac ctgaagcacg
     6001 tcttcggggg atcggatccg gggagccggc ggccgcagct cccgggccag tcgggagccc
     6061 aactcgaggg ccgccatcag gcgcgccgcc ttggccggac ccaccccgcc aacccgttgc
     6121 agctcccccg gaggacgggc cgccagacgc cggagcgagc ccgcgccggc ctccaggagg
     6181 gcccgcgcga cctccagcac gtcctcgccc gggcggccgg tgcctaacac caatgccacc
     6241 agctcctcgg tcaacaggac ggccgg
//
LOCUS       DASWKS010000626         6991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3636171, whole genome shotgun sequence.
ACCESSION   DASWKS010000626 DASWKS010000000
VERSION     DASWKS010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3636171"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /gene="lepB"
                     /locus_tag="VGA78_17880"
     CDS             <1..712
                     /gene="lepB"
                     /locus_tag="VGA78_17880"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX9895807.1"
                     /translation="VQTKKRGFLVWLWEWVKSITFALVVWLFLRTFLIEAFRIPSGSM
                     ENTLLIGDFLFVNKLLYGAEVPLLHKRLPAVREPRLHDVVVFDSVEEEGLKVVKRLVG
                     MPGDTLEMRGGELHRNGEKVEEPWARHGNPGAFADAFHRAKMREWQLQYLVRRDTAEY
                     NPDLQDWGPVVVPQDHYFMMGDNRDDSYDGRYWGFLPRENVRGRPLFVYFSFDPNSWR
                     PLPFFTAVRWGRIFSAPR"
     gene            complement(803..1963)
                     /locus_tag="VGA78_17885"
     CDS             complement(803..1963)
                     /locus_tag="VGA78_17885"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX9895808.1"
                     /translation="METTAPRLRDTASPWLVVVLLGDVTCFGIVMPLLASYAAEYRAS
                     TTSIGVLVASYSAMHFFLAPVWGRLSDRIGRRPVLLLGLVGTLLSSLLFAVAQSFLLL
                     LLSRILAGGLGATLNVAQAYVADQSTPSGRTRVMGLVGAAFGFGFILGPTIGGLSTQL
                     GNAAPGLAASAIAAANLLLALVTLREPAVHRPAFRAATTPLPWRPLIAPFAAAVASTL
                     AFTVLYVVFPLHAEQSLGYDRSRVSYLFAFVGLMTAIVQGGLVGTLSRVLGEGRLLLL
                     GGIMMATGLGLLPRVSAAGGTPFYAALAMVGIGFGFAGPAEAGYVSRTSAAELQGRIL
                     GSLQSINSIARILGPVAAGVAMGAGGAPTAFVGAAAFAAVAGILGLAMREDL"
     gene            2138..3259
                     /locus_tag="VGA78_17890"
     CDS             2138..3259
                     /locus_tag="VGA78_17890"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEX9895809.1"
                     /translation="MTPAEVVALEAERARFAGDADVLTRIGVRFYEGQEYPRALDVLT
                     AAMALRPTFTTAVYLGLTHEAVGHLDSAEVSYRAAGSSRMTRAQRDQLDSRLAALART
                     RLRAEARASIAREAALASTPPEPGTIAVMPWTFIGTDADLRPLGIGVAHLVLTDLSRV
                     SAFKLVERERVQVLIEEMELANLGRVDPRTAARAGRLLRAERVVHGIVRQTRDGIQLE
                     AQVFRTDDGRIEASQGAGDRLERLFALEKGILLSLVDQMGVPVSPAERRAITERPIQD
                     MQSFLALSRGLEAQARPPTLNSSALTRLASPVAPTEMAGRAATLTSAIAVVAPSTGGG
                     VDRRTRLPVANPRLPEALRQDNPSRIAGLPNLIIIIPRP"
     gene            3256..4371
                     /locus_tag="VGA78_17895"
     CDS             3256..4371
                     /locus_tag="VGA78_17895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895810.1"
                     /translation="MSLRLAARALGLLIVMACQSLGAQYVPEPRALSTGIETRYYDLG
                     PNLAVSSLGQIAIPVALVMPLGRFVFDAGAWLASTTLSRHDGFRETVTGLTDTQLRAA
                     YAFRSESVVLSALVNLPTGARDLTVTEYAVLAAASSSFFAFPVNAYGSGASLTLGAAG
                     AFEWGQWNVGVAASARLSDDFSPFRDGEGDFTYRSGLEVRLRGGADRLVGNGRLAVGA
                     TFSTFSTDEFATGAGASGVYRPGRRVIAEASYTALIGPATLTGYLWDFYRTAGDSAGT
                     SAGNSENLLAAGVMGRWTLRPTLFFEPGGEFRWYAPEEGSAIMLELSAALRIRLSPRY
                     TLVPIAKLHFGRLEEPEPGLGHGIRGGGLSVLLRWSL"
     gene            4474..4971
                     /locus_tag="VGA78_17900"
     CDS             4474..4971
                     /locus_tag="VGA78_17900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895811.1"
                     /translation="MTELAGTQLSSLLETLPGIATVLRSPVADAIVNLVRAASDQAPF
                     SMGDAEELMRYAIRRNLIAAEESERVLAETREALASAPGAGPAKPDLKPKKLPAPKLV
                     APKPVPPKLIAPKAVAPKPVAPKQMAVKKSVKPVKMAKPTAAKKKGKPARAGLKSTRA
                     PHKKK"
     gene            complement(4976..6670)
                     /locus_tag="VGA78_17905"
     CDS             complement(4976..6670)
                     /locus_tag="VGA78_17905"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX9895812.1"
                     /translation="MNVLGSLRRRLVAGLVLLGLLFLALVFAGIGSLRAVNRTVATEL
                     SLLAASSGLATDLVGSVADQVRAGEAYLNQPSPSLAVDFIRLGDSSHTYRRRFRLLPG
                     MTGEDQSRLNQVETSQAQMEVAYAEAHAYSDLGRTDLALERARQARAPAEALIDDVRT
                     LTGRQQTRVTQRIDQLRRRASQREALVWLLFVSAVILGMGTGFLTVRSIDTPLTQLSD
                     AARRFGEGDLRPNELGDMPQELATLARAMGHMAARLRSVIDSVIREARSIGMFAGDLS
                     AMSEQLAAGSAEISRAIGGVTQNAEQQVQEVRAADQVIAGWRESAARDAGVAERMLSS
                     GDQVRLLAEHQRKDLAAAATALDGLRRGAQDAATRTRDLTRQTDSISELLDMARQLGA
                     QSEVLAINAAIEAARNGREGEGVAAIATEARRLADSSRAATERVSSGSEALRNVIAAL
                     ANSIQTISTEAVTVGTTAQRTQTALDEIIRTVEGLREHANQVARSSAESRNIAGRLAD
                     LRVRLETDARGTVAASAAVTGAAGDQNNATGEIATSAANLLESSERLAALVAEFRV"
     gene            complement(6667..>6991)
                     /locus_tag="VGA78_17910"
     CDS             complement(6667..>6991)
                     /locus_tag="VGA78_17910"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX9895813.1"
                     /translation="AYLPSMDTPQNQRFVRTYRERYPNAGLPNQPAAATYDALFMLRD
                     VIAVTGSDRQAIRDGLNGLGTSLPPYQGITGILAFEGRGDLARLPVLIGVVRNGTVVP
                     VERPR"
BASE COUNT         1147 a         2370 c         2318 g         1156 t
ORIGIN      
        1 agttcaaaca aaaaaacgcg gtttcctggt ttggctttgg gaatgggtca aatccatcac
       61 ctttgcgctg gtggtgtggc tctttctgcg caccttcctg atcgaagcgt ttcgaatccc
      121 gtcgggcagc atggaaaaca ccctgctgat cggggatttc ttgttcgtca acaagctgct
      181 ttatggtgcc gaggtcccgc tcctccacaa gcgacttccg gcggtgcgtg agccccgcct
      241 gcacgatgtg gtggtcttcg attcggtcga ggaggagggg ctcaaggtcg tgaagcgtct
      301 ggtgggcatg ccgggcgata cgctcgagat gcggggcggc gagctccacc gcaacggaga
      361 aaaggtggaa gagccgtggg cccggcatgg caatcccggg gcctttgccg acgccttcca
      421 tcgggccaag atgcgggaat ggcagctcca gtacctggtg cggcgcgaca ccgccgagta
      481 caaccccgat ctgcaggact gggggccggt agtggttccg caggaccact acttcatgat
      541 gggcgacaac cgcgacgatt cctatgacgg ccgctactgg ggctttctcc cccgcgagaa
      601 cgttcgaggc cgtccactgt tcgtctattt cagctttgac cctaacagct ggcgccccct
      661 gccgttcttc accgccgtgc gatggggcag gatcttttcg gcaccgcgct agacgtcgga
      721 atgtgtcgga agagtcggaa ttgagcttcc gacccttacg acccttccga ctcttccgac
      781 cccttccgac ccttccgagc gcttacagat cctccctcat cgctaatccc aggattcccg
      841 ccactgccgc aaaggccgcg gcgcccacga acgcggtcgg agcgccgccg gcccccatgg
      901 ccacgcccgc cgcgaccgga cccaggatcc gggcgatgga attgatgctc tgcagactgc
      961 cgaggatccg cccctgcaac tccgccgctg aggtccgcga tacgtacccg gcttcggctg
     1021 gtcccgcgaa cccgaacccg atgcccacca tggccagggc ggcgtagaac ggtgtccctc
     1081 ccgcagcgga tacacggggc agcagcccca gtccggtcgc catcatgatc ccacccagca
     1141 gcagcagccg gccttcaccc aggactcggg acagggttcc taccagaccc ccttgcacga
     1201 tggccgtcat cagccccacg aaggcgaaca ggtagctcac ccggctgcga tcgtagccca
     1261 gcgactgctc ggcgtgcagc gggaagacca cgtacagcac cgtgaaggcc agcgtcgacg
     1321 ccactgccgc cgcgaaagga gcgatcaacg gccgccacgg caacggtgtc gtagccgctc
     1381 tgaacgccgg ccgatgaacc gccggttcgc ggagcgtgac cagcgccagc agcaggtttg
     1441 cagccgcgat ggcgctggcc gccaagccgg gggcggcgtt gcccagttgg gtggagagtc
     1501 cgccgatggt cggacccaga atgaacccga acccgaaggc ggcgcccacc agccccatga
     1561 cccgggtgcg acccgatggg gtggactgat ccgcgacgta cgcctgggcg acgttgaggg
     1621 tggctcccag gccgcccgcc aggatccgcg agagcagcag gagcaggaaa ctctgcgcca
     1681 ccgcgaacag cagcgaggac aacagtgtgc ctaccagccc cagcagcagc accggccgcc
     1741 gtccaatacg atcgctcagg cgaccccaga ccggggccag gaagaagtgc atggctgaat
     1801 aggaggcgac cagcaccccg atggaggtgg tgctggcgcg gtactctgcg gcgtagctgg
     1861 cgagcagcgg catcacgatg ccaaagcacg tgacgtcgcc caacaggaca acgacgagcc
     1921 agggggaggc ggtgtcgcgc aggcgggggg cggtcgtctc catggcgggc ctgaagctag
     1981 ggcgtcgggc gcccggggcc aagacggtgc gttgccgctc cgccggcgga ttgcgtagat
     2041 tgcggagaca aaaccactta gcacattcat gcggtttccc atcgcagctg ttctcattgc
     2101 atgcgcggcc tgtgcaggag gttcccggct ccaaccggtg actccggccg aagttgtcgc
     2161 gctggaagcg gagcgggctc gcttcgccgg ggatgccgat gtcctgactc gcatcggggt
     2221 ccgattctat gaagggcagg aatatcccag agccctcgac gtgctgaccg ccgcgatggc
     2281 cttgcggccc acgttcacga cggccgtgta tctgggactg acccacgagg cggtgggaca
     2341 cctcgatagt gccgaagtga gctaccgcgc ggccggttcc tcccggatga cccgggccca
     2401 gcgggatcag ttggatagcc ggctcgcggc cctggcccgc actcggcttc gggccgaggc
     2461 cagggcgtcg atcgcgcgcg aagcggccct ggccagcaca ccgcccgaac cgggcaccat
     2521 cgcagtcatg ccctggacat tcatcgggac cgatgccgac ctgcggcctc tcggaatcgg
     2581 tgttgcccac ttggtgctga cggacctttc ccgagtttcc gcattcaagc tggtcgaacg
     2641 cgagcgggtt caggtcctga tcgaggagat ggagctggcc aatctgggcc gggtcgatcc
     2701 ccgaaccgcg gcgcgcgccg gtcggctgct ccgggccgag cgcgtggtcc acgggatcgt
     2761 gcgacagacc cgcgacggca tccagctgga ggcgcaggtc tttcgcaccg acgacggccg
     2821 gatcgaagcc agccagggag cgggggaccg gctggagcgg ctcttcgccc tggagaaggg
     2881 cattctgctg agcctggtgg accagatggg ggttccggtg agccccgccg aacgccgcgc
     2941 gattaccgag aggccgatcc aggacatgca gagttttctc gccctcagcc ggggactcga
     3001 ggcccaggcc cggcctccca cgctcaattc gagtgcgctc acccggctgg cttcgccagt
     3061 ggcgccgacc gagatggctg gtcgcgcggc gactctcacc tcggccattg cggtggttgc
     3121 ccccagtacc ggcggcgggg tcgaccgccg cacccggtta ccggtagcca acccgaggct
     3181 cccggaagcg ctccgccagg acaatcccag ccggattgca ggtctgccaa acctcatcat
     3241 catcatcccg cgtccatgag ccttcgcctc gcggcgcggg cgctcgggct gctgatcgtg
     3301 atggcgtgtc aatcgctggg ggcgcagtac gtccccgagc cccgggcatt gagcaccgga
     3361 atcgagacca ggtactacga cctggggccc aacctcgctg tgagctcgct gggacagatc
     3421 gccatcccgg tggcgctggt catgccgctg gggcgtttcg tgttcgatgc cggtgcctgg
     3481 ctggcttcca ctacgctgtc gcggcacgat ggcttccgcg aaaccgtcac cggcctgacc
     3541 gacactcagc tccgtgccgc ctacgcgttt cgcagcgaat cggtcgtgct ctcggccctg
     3601 gtcaacctgc ctaccggagc ccgcgatctc acggtgaccg agtacgcggt gctggcggca
     3661 gcctcctcca gcttctttgc ctttcccgtc aacgcctacg gcagcggagc ctccttgacg
     3721 ctcggggccg ccggggcctt cgagtgggga cagtggaatg tcggcgtggc ggccagcgcc
     3781 cggctatcgg atgatttcag tccgtttcgc gatggggagg gcgacttcac ctaccgttcc
     3841 gggctggagg tccggctccg gggaggtgcc gaccgactgg tggggaatgg ccgactggca
     3901 gtaggggcca ccttcagcac tttcagcacc gacgagttcg cgaccggcgc cggagccagt
     3961 ggtgtttatc gaccgggccg gcgggtcatc gcagaagcct cctacactgc cctgatcgga
     4021 ccggccacgc tcacgggcta tctctgggac ttttatcgca ccgcgggtga ctccgccggc
     4081 accagcgctg gaaacagcga gaacctactg gccgctggag tcatggggcg atggaccctc
     4141 cggcccacac tcttcttcga accgggcggc gagttccggt ggtacgcgcc ggaagagggc
     4201 tcggccatca tgctggagct gagcgctgcc ctgcgcattc ggctgtcgcc ccgatacacc
     4261 ctggttccaa tcgcgaagct tcattttggg agactggagg agcccgagcc gggtcttggg
     4321 catggaatac ggggcggtgg cctatcggtt cttcttcggt ggtcgctgta gctactacgc
     4381 tgccttcctt gactcgctta cccccgctgg gtagtcttgc gccgggttag ccaccggctt
     4441 gggtggtgct cattcctcca ggagcaagac cgggtgacag aactcgcggg tacccagctc
     4501 tcatcgttgc tcgagacctt gcccggcatc gccacggtgc tccggagtcc ggtggccgat
     4561 gcgatcgtca acctggttcg agccgcttcg gatcaggccc cgttcagcat gggcgatgcg
     4621 gaagagctga tgcggtatgc aatccggcgg aatctgatcg ccgcggagga aagcgagcgg
     4681 gtcctcgctg agacccgaga ggcattggcc tcggcaccag gcgccggtcc ggccaagccg
     4741 gatctcaagc ccaagaaact accggccccc aaactggtgg ccccgaagcc ggtgcccccg
     4801 aagctgattg ccccgaaggc cgtggccccc aaacccgtgg ctcccaagca gatggcggtc
     4861 aagaagtcgg tgaagccggt caagatggcc aagcccaccg cggccaagaa gaagggtaag
     4921 cctgccaggg cgggtctcaa gtcgacccgc gcgccgcaca agaagaagta gtcgcctaga
     4981 cccggaactc cgccaccagc gcggcgagtc gctcggaaga ttcgagcagg tttgccgcgc
     5041 tggtggcgat ttcgccggtg gcgttgttct gatccccggc ggcgccggtc accgctgcgc
     5101 ttgccgccac ggttccgcgg gcatcggtct ccagccggac ccgcaggtcc gccaggcggc
     5161 cggcgatgtt gcggctttcg gccgaggagc gagccacctg attggcgtgc tcccgcaagc
     5221 cctccacggt gcggatgatc tcgtccagcg cggtctgagt ccgttgggcg gtggtcccca
     5281 cggtcacggc ctcggtgctg atggtctgga tcgagttggc cagcgccgcg atcacgtttc
     5341 gtagcgcctc actgccggag gagacccgtt cggtggcggc ccggctggag tcggccaggc
     5401 ggcgggcctc ggtggcaatc gccgcgaccc cctcgccttc ccgtccgttt cgcgccgcct
     5461 cgatggctgc gttaatggcc agcacttcgc tctgcgcccc gagctggcgg gccatgtcga
     5521 gcaactcact gatggagtcg gtctggcggg tcaggtcccg ggtgcgagta gcggcatcct
     5581 gggccccccg tctcagccca tcgagcgccg tggcggccgc ggcgagatcc ttgcgctgat
     5641 gctcggccag cagccgcacc tgatcgccgc tgctcagcat ccgctccgcc actcccgcgt
     5701 cgcgggctgc cgactcccgc cagccggcaa taacctgatc cgccgcccgg acttcctgca
     5761 cctgctgctc ggcgttctgg gtgactccgc cgatggcgcg cgaaatctcc gcgctgccgg
     5821 cagcgagctg ctcgctcatg gcggagagat caccagcgaa catgccgatg ctccgggctt
     5881 cccggatgac gctgtcgatc acgctgcgga gtcgagccgc catgtggccc atggcccggg
     5941 ccagggtagc cagttcctgc ggcatgtcgc ccagctcgtt cggtcgcaga tcgccctcac
     6001 cgaaccggcg ggccgcatcg ctcagctggg tcaggggagt atcgatcgat cggaccgtga
     6061 gaaacccggt ccccataccc aggatcaccg ccgagacgaa cagaagccag accagcgctt
     6121 cccgctggga cgcccggcgc cgcaactgat cgattcgctg ggtaactcgg gtctgctgcc
     6181 gtccggtcaa cgtgcggacg tcgtcgatca gggcttcggc gggagcgcga gcctgcctag
     6241 cccgctcgag cgccaggtcg gtgcgaccca gatcgctgta ggcatgggcc tcggcatagg
     6301 ccacctccat ctgggcctga ctggtctcga cctgattcaa tcgggactgg tcctccccgg
     6361 tcatcccggg gagcaatcgg aaacgccgac ggtaggtgtg gctactgtcc cccagccgga
     6421 tgaagtcgac cgccagtgac ggcgacggct ggttgagata ggcctccccg gcccggacct
     6481 gatccgccac cgagcccacc agatcggtag cgaggcccga gctcgcggcc aggagtgaca
     6541 gctcggtcgc caccgttcga ttgacggctc ggaggctgcc gatgcccgcg aataccaacg
     6601 ccaggaacaa caatcccagc agcaccagtc cggcaaccag ccgccggcga aggctcccca
     6661 gtacgttcac cggggccgct ccaccggcac caccgtgccg ttgcgcacca cgccgatgag
     6721 caccgggagc cgggccaaat ctccccggcc ttcgaacgcc agaattccgg tgatcccttg
     6781 gtagggaggc aggctggtgc cgaggccgtt cagcccgtct cgaatcgcct ggcggtcgga
     6841 tccggtgacc gcaatcacgt ctcgcagcat gaagagagcg tcataggtgg cggcagccgg
     6901 ctggttgggg aggccggcgt tggggtatcg ctctcgatag gttcgcacga accgctggtt
     6961 ctggggcgta tccatcgaag gcaggtaggc c
//
LOCUS       DASWKS010000627         1566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2941110, whole genome shotgun sequence.
ACCESSION   DASWKS010000627 DASWKS010000000
VERSION     DASWKS010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2941110"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1566
                     /locus_tag="VGA78_17915"
     CDS             <1..>1566
                     /locus_tag="VGA78_17915"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX9895814.1"
                     /translation="TLAFLQYTSGSTGIPKGVMLSHSNLLYNSALIAYAFEHTRSASG
                     VFWLPTYHDMGLVGGILQPLYLGRPNILMSPVAFVQKPFRWLQAISRYRGTTSGGPNF
                     AFDLCVRKITPEQRATLDLSSWTVAFCGAEPVRAETLERFADTFAPCGFRSEAFYPCY
                     GLAEATLLVSGGYKTAPPIVRWLDRKSLEADRVVPIAAGAGGARALVGCGQTMPDQQI
                     VITDPNRLIRMPAGQVGEVWVSGPSVAQGYWQRTDETEQTFCAYLQDTGEGPFLRTGD
                     LGFTHHGELFVTGRLKDLMIVHGCNHYPQDIEATAAKSHPGVRAGWGAAFTVEEGSGQ
                     KLVIILELERRQRAEAARVIEAIRRDVAREHELVVDSIALVRAGSIPKTSSGKIQRYA
                     CRDAFLDRSLEVEAEWHREGSDGLVAASSAPGRGQAGQAPTSEDREAAAQPSTSNSSR
                     AAARWQTLEATTEIVLDVVRSIGKDRTVGLELDSSIVELGLDSLERLEIVAALEDHFG
                     GRFPEQVIAEMYT"
BASE COUNT          268 a          494 c          537 g          267 t
ORIGIN      
        1 acacgctggc cttccttcaa tacacctcgg gctcgacggg gatccccaaa ggggtgatgc
       61 tgagccattc aaacctgttg tacaactcgg cgctgatcgc ctatgcgttc gagcatacgc
      121 ggtcagcctc tggcgtgttc tggctgccga cctaccatga catggggctg gtaggcggga
      181 ttctccagcc actgtacctg ggtcgtccga acatcctgat gtcgcccgtg gcttttgttc
      241 agaagccgtt ccgctggctc caggcaatat cccgctaccg cgggacgacg agcgggggcc
      301 cgaatttcgc cttcgacctc tgtgttcgca agatcacgcc cgaacagcgg gccacgctgg
      361 acctgagcag ctggacggtg gccttctgcg gggccgagcc ggtgcgggca gaaacccttg
      421 agcgctttgc tgacacgttt gcgccttgcg gcttccggtc ggaggccttc tatccctgct
      481 acggcttggc cgaggcgacg ctgctggtgt caggcgggta caagaccgcc ccacccatcg
      541 tccgctggct cgatcgcaaa tcgttggagg ccgaccgcgt cgtgccgatc gcagctggcg
      601 cgggcggggc ccgtgccctg gtcggttgcg gacagaccat gcccgaccag cagattgtca
      661 ttaccgaccc gaaccggctc atccgcatgc cggccggcca ggtcggcgag gtctgggtgt
      721 cggggccaag cgtcgcgcaa ggatattggc agcgaaccga cgaaacggag cagacgttct
      781 gcgcgtacct gcaagacacg ggcgaaggcc cgttcctgcg taccggtgac ttgggcttca
      841 cgcaccacgg cgagctgttc gtcaccggcc ggctgaagga tctgatgatc gtccacggct
      901 gcaaccatta cccacaagac atcgaagcca cggcggcaaa gagccaccct ggcgtgcgag
      961 ccggctgggg cgctgcgttc acagtggagg agggttccgg ccagaagctg gtgatcatcc
     1021 tggagctgga acggcgccaa cgggcggagg cggcccgggt gatcgaggcg atccgccgcg
     1081 acgtggccag ggagcatgag ctcgtggtcg actcgattgc gctcgtgcgc gccgggagta
     1141 tccccaaaac ctccagcggc aagatccagc ggtacgcctg ccgtgatgcg ttcctggacc
     1201 gaagcctgga agtggaggcc gagtggcatc gggaaggcag cgacgggctg gtcgctgcct
     1261 cctccgctcc gggccgtggg caggcgggcc aagcaccgac atccgaagac cgcgaagcag
     1321 ccgcgcagcc atcgacttcg aacagtagcc gcgctgcggc ccgctggcag acactcgaag
     1381 cgacgaccga gatcgtgttg gacgtggtcc ggtcgatcgg caaggaccgg acggtcgggc
     1441 ttgagctgga ctcgtcgatc gtcgagctgg ggctggactc gctggagcga ttggagattg
     1501 tcgccgcgct ggaggaccac ttcggcggcc ggttcccgga gcaggtgatc gccgagatgt
     1561 acacgt
//
LOCUS       DASWKS010000628         3948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_709732, whole genome shotgun sequence.
ACCESSION   DASWKS010000628 DASWKS010000000
VERSION     DASWKS010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3948
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709732"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1019)
                     /locus_tag="VGA78_17920"
     CDS             complement(<1..1019)
                     /locus_tag="VGA78_17920"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9895815.1"
                     /translation="MIPDLSVRAQALRERLLGFLAGRILPNEEAVDAAIAANGWQPVA
                     LIEDLKQEARGAGLWNLFLPDPALGAGLSLREYAAMAEIMGRVWWASEAFNCSAPDTG
                     NMEVLLQYGSPEQRERWLTPLLDGRIRSCFAMTEPDVASSDATNIRTAIARQGDGYVI
                     SGRKWWISGAGDPRCAVAIVMGRTTPDAPPHRQQSMVLVPMDAPGVRVHRMLRVFGYD
                     DAPHGHAEIEFTGVKVPAGHLIGAEGQGFEIAQSRLGPGRIHHCMRLIGQAERALELM
                     CDRARSRVAFGGPLAERGMVREAIARSRIEIDQARLLVLRAAHLIDTVGAKAARREVA
                     MIKAAA"
     gene            complement(1016..1777)
                     /locus_tag="VGA78_17925"
     CDS             complement(1016..1777)
                     /locus_tag="VGA78_17925"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX9895816.1"
                     /translation="MPVLDLFQLQGRVALVTGGSRGLGLEIGVALAQAGARVALLARR
                     AELFAEARATLPDAIQLLGNVALKADVDRAVAETTERLGPPAILVNAAGISWGAPAME
                     MPVEKVQEVLMVNLVGAFLCAQATAPRMREQGYGKIINVASIAGLKGTAPELLDAVGY
                     SASKGGLIALTRDLAAKWGQYGIRVNALAPGYFLSRMTEKLLPRIEPYLNAHTPLGRI
                     GAPGELAGAALFLASPASDYITGVTLPVDGGLAAV"
     gene            complement(1786..2325)
                     /locus_tag="VGA78_17930"
     CDS             complement(1786..2325)
                     /locus_tag="VGA78_17930"
                     /inference="COORDINATES: protein motif:HMM:NF025939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX9895817.1"
                     /translation="MRVPAVAAALLSLIVSVPAAQQVPDPEARLRELAITLPPVDPPF
                     ANYVRAVRTGNLVFLAGHGPCGDLDARPEYKGKVGRNRTVEEGYVAARATAVCLLASL
                     KAEIGDLRKVRRFVKVLGMVNATEDFTMHPRVINGASDLLVEVFGDRGRHARSAVGMI
                     SLPLNITVEIELVVEVDPA"
     gene            complement(2354..3031)
                     /locus_tag="VGA78_17935"
     CDS             complement(2354..3031)
                     /locus_tag="VGA78_17935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX9895818.1"
                     /translation="MSRTIVLAGATGLVGRECLRFAARDPAIAKVYALVRRFVHPSAQ
                     PQRVEYRIIDFNRLDDVTLPPPVDAVVCTLGTTLKQAGSREAFSRVDYEYVLALAQRG
                     LGWGARHFLLVSALWANPRSHIFYCRMKGEIEAAVGSLPYQSVTILRPSVLAGQRAKP
                     RVAEQLFRRIGGLLPSRYRAVTAARVAAALLAAVNQPRDGLTVLDNGVLRDTPLPSST
                     GWSEQVT"
     gene            3121..>3948
                     /locus_tag="VGA78_17940"
     CDS             3121..>3948
                     /locus_tag="VGA78_17940"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX9895819.1"
                     /translation="MARSVFLASLAAGSRAEAQGPIGRWDLTAQEGGASYPMWLELQA
                     GPPPSGRLQRRTGHALPLTGISIAGNRVSFPMPSEEPEANAGRWTATIEGEVIIGEIT
                     LPNGSKIAVAGRRAPSLTRERPPAWGQPIDLLEGGMGGWRIRTGRSGWSLANGELVNT
                     PPSNDLMSRSVFTDFQLRLEVNVPPSGNSGIYLRGRHEVQVADDYGKEPHNRRMGGIY
                     GQVTPLLLPARPAGEWQSFDITLIGRRVTVRLNGVTIIDDAEIPGITGGALDSDEAAP
                     "
BASE COUNT          661 a         1356 c         1356 g          575 t
ORIGIN      
        1 gccgcggcct tgatcatggc gacctcccgc cgggctgcct tggctcccac cgtgtcgatc
       61 aaatgcgccg cccggagcac cagcagccgg gcctggtcga tctcgatccg cgatcgggcg
      121 atcgcttccc gcaccatccc gcgctcggcc aggggcccgc cgaacgcgac tcgagaccgg
      181 gcccggtcgc acatgagctc cagggcgcgt tccgcctgtc cgatcaatcg catgcagtga
      241 tgaatccgtc cgggtcccag gcggctctgg gcaatctcga atccctggcc ttccgctccg
      301 atcagatggc cggccgggac tttcacgccg gtgaactcga tctcggcgtg gccgtggggc
      361 gcatcatcgt acccgaatac gcggagcatg cggtggactc gcacccccgg cgcgtccatc
      421 gggaccagca ccatcgactg ctggcggtgg ggcggggcat ccggcgtggt gcggcccatg
      481 acgatggcca cggcgcagcg gggatcgccc gcgccggaga tccaccactt gcgacccgag
      541 attacgtagc cgtcgccctg gcgcgcgatg gcggtccgga tgttggtggc atcggaggag
      601 gccacgtcgg gctcggtcat cgcgaagcag gatcggatcc ggccatccag cagcggagtc
      661 agccagcgct cccgctgttc cggcgacccg tactggagga gcacctccat gtttccggta
      721 tcgggcgcgc tgcagttgaa ggcctcgctg gcccaccaga cccggcccat gatctccgcc
      781 atcgccgcat actcccgcag cgacagcccc gcgcccagcg cgggatccgg aaggaagaga
      841 ttccacaacc cggctccgcg cgcttcctgc ttgagatcct cgatcagggc gaccggctgc
      901 cagccgttgg cggcgatggc ggcgtcgacc gcctcctcgt taggcaggat ccggccggcg
      961 aggaacccga gcaaccgttc ccgcagggcc tgggcccgga ccgagagatc ggggatcata
     1021 ccgccgcgag acccccatcg accggcaggg tgacgccggt gatgtaatcc gacgccgggc
     1081 tcgcgagaaa gagggcggcg cctgccagtt cgcccggcgc gccgatccgc cccaggggcg
     1141 tgtgagcgtt caggtagggc tcgatccggg gaagcagctt ctcggtcatg cgcgagagga
     1201 agtagcccgg tgccagtgcg ttcacccgga tgccgtactg cccccacttg gcggccaggt
     1261 cccgggtgag ggcgatcaac ccgcccttgc tcgcgctgta gcccacggcg tcgagcaatt
     1321 cgggagcggt ccccttgagg cccgcgatcg aggccacgtt gatgatcttg ccgtacccct
     1381 gctcccgcat ccggggtgcc gtggcctggg cgcagaggaa ggcgcctacc aggttcacca
     1441 tcagcacctc ctgcactttc tccaccggca tttccatcgc gggagcgccc caggaaatcc
     1501 ccgcggcatt caccagaatg gcgggcgggc ccagccgctc ggtggtctcg gccacggcac
     1561 gatcgacgtc tgccttgagc gccacgttgc ccagcagctg gatcgcgtcg gggagcgtgg
     1621 cccgggcttc ggcgaagagc tcggcccgcc gggccagaag ggccacccga gcgccggcct
     1681 gggccagggc caccccgatc tcgagtccga gcccgcggga gcctccggtg accagcgcca
     1741 cccggccctg cagctgaaac agatcgagca ccggcattcg gtcagttacg ccggatccac
     1801 ttcgacgacc agctcgattt ccaccgtgat attcaacggc agcgagatca tgccgaccgc
     1861 ggaacgggca tgccgtcccc ggtcgccaaa gacctccacc agcaagtcgg acgccccgtt
     1921 gatgacccgg ggatgcatgg tgaaatcctc ggttgcgttc accatgccga ggaccttcac
     1981 gaaccggcgg accttgcgga gatcgccgat ttcggccttg agcgacgcca ataggcagac
     2041 ggcagtggcc cgggcagcga catacccttc ctcgaccgtg cggttccgtc ccaccttgcc
     2101 cttgtactcg ggacgggcat ccaggtcgcc gcagggaccg tgaccggcca ggaataccag
     2161 gttcccggtc cgaaccgctc tcacgtagtt ggcgaaggga ggatcgaccg gcggcagggt
     2221 gatggctagc tcgcgcagcc gggcctcggg gtcggggacc tgttgcgccg ccgggacgct
     2281 gacaatcagg ctgagaagcg ccgcggcgac ggcgggaacg cgcatggggt gctccggtcg
     2341 ggggaagtgc agcctaagta acctgttcgg accaacccgt ggaagagggg aggggggtgt
     2401 cgcggagcac cccgttgtcc aggacggtca gtccgtcgcg gggctgattg accgccgcca
     2461 ggagcgccgc cgcgacccga gccgcggtga ccgcgcgata gcgggacggc agcagtccgc
     2521 cgatccgccg aaacagctgc tccgccaccc ggggcttcgc ccgctggccg gccaacaccg
     2581 aaggccgcag gatggtcacg ctctggtagg gaagggaacc caccgccgct tcgatttccc
     2641 ccttcatgcg gcagtagaaa atgtgcgagc gcgggttggc ccacagggcc gataccagca
     2701 gaaagtggcg ggctccccag cccagtcccc gttgagccag ggccaggacg tactcgtaat
     2761 ccacccggct gaacgcctca cgcgagccgg cctgtttgag agtagttccc agcgtgcata
     2821 cgaccgcgtc cactggtggc ggcagggtga cgtcatcgag acgattgaaa tcgatgatcc
     2881 ggtattcgac ccgctgaggc tgggccgacg ggtgcacaaa ccgccgtacc agcgcgtaga
     2941 ctttcgcgat cgcgggatcg cgggcggcaa agcggaggca ctcgcggccc accaggccgg
     3001 tggcccccgc gagcacgatg gtgcgggaca tgcaacaaag gtagctcttg accggcggcc
     3061 caagcgggtg gagtgtgaat ctattccggg cgacgggaag acccagtgga aatccgatct
     3121 atggcgcgct cagtgttctt ggcctcgttg gccgccggtt caagggcgga agcccagggg
     3181 ccgatcggcc gctgggatct cacggcgcag gaaggcgggg catcgtaccc catgtggctg
     3241 gaactgcagg ccggaccgcc gcccagcgga cggctccagc ggcggaccgg ccatgccctg
     3301 ccgctcaccg ggatctccat tgccggtaat cgggtgagct tcccgatgcc gtcagaggag
     3361 ccggaggcaa atgccgggcg ctggaccgcc accatcgagg gcgaggtaat catcggcgaa
     3421 atcaccctgc ccaacggctc caagattgcg gtggccgggc gccgggcgcc gtctctgacc
     3481 cgggagcgcc caccggcgtg gggccagccc atcgacctgc tggagggcgg gatgggagga
     3541 tggcgaatcc ggaccggccg aagcggatgg tcgctggcca acggcgagct ggtcaacacc
     3601 ccgcccagca acgacctgat gagccgatcg gtgttcaccg actttcagtt gcggctggag
     3661 gtgaatgtcc cgccctcggg taacagcggg atctacctgc gcggccggca tgaggtgcag
     3721 gtggcggacg attacgggaa ggaaccccac aatcgccgga tgggcggcat ctacggccag
     3781 gtcacacccc tcctgctccc ggcccggccg gccggcgagt ggcagagctt cgacatcacg
     3841 ctcatcggcc ggcgcgtgac cgtccggctg aatggggtga ccatcatcga tgacgcggag
     3901 atccccggca tcacgggagg cgcgctcgac agcgacgagg ccgccccc
//
LOCUS       DASWKS010000629         3588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3305285, whole genome shotgun sequence.
ACCESSION   DASWKS010000629 DASWKS010000000
VERSION     DASWKS010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3588
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3305285"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VGA78_17945"
     CDS             <1..490
                     /locus_tag="VGA78_17945"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="globin domain-containing protein"
                     /protein_id="HEX9895820.1"
                     /translation="GTPSGHPDTVLPGWTGSMTPESEQLVQQSWSLVSQRSMALAERF
                     YGRLFEIAPEQQRLFAVTDMLNQQRKFIAMLQEIVRRIGTPDQLVPEVAALGARHVGY
                     GVTAKDYAVVGEALIWALEQELGPAMTPELRQAWKEAYLLTARLMGRGADVRPAAPVT
                     ED"
     gene            complement(438..1346)
                     /locus_tag="VGA78_17950"
     CDS             complement(438..1346)
                     /locus_tag="VGA78_17950"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HEX9895821.1"
                     /translation="MKLPRPGFRVALLATAASLLTIWVTRRPSNDREWIPEQAVLPSV
                     RLEGPIVHLSGVRNFAYTGPDRFTPSYVERRYDLDQLTDLWFVLTPFAKSWRGPAHSF
                     LTFGFADSQFVAISVEARKEPGETYNPLWGMLRRYELMYVIGDERDLIGQRAAFQRYP
                     VYLYPVKAPREQIRALFGAMLERAEGLRHRPEFYHTLTSNCTSNIVDQVNRIVPDAIP
                     ASWKTVFPGDIDEVGVRLGLIDTTLPVEAARERYRINDVARRFIDDPAFSLRIRRQGE
                     SSAIGSRQAVSPQLPARPASRPPHAP"
     gene            complement(1361..>3588)
                     /locus_tag="VGA78_17955"
     CDS             complement(1361..>3588)
                     /locus_tag="VGA78_17955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895822.1"
                     /translation="ALMRALIAAGDTSGALQHGRSFQTALVDELELPPDREVESVNAG
                     LLSGQIVAAPSAPAPPMPSGAPAVAPAPVSVHPVGPVAVPHRVPWALLIGSAAVGLVL
                     LGVGIRWAGAGRDPPTLSIGRLADYRTLPREELRGPLVDLLATALGRSPALRVVSTAR
                     MYELLGGPVSESDLPISTWAEVARRAGASQLIDGALYQLPDGLLRLDLRRLDLRNGEV
                     LGSARAQAADPFALADSATAVLLAGMGFEAPRGSIAALTTSSIAAYRLYEQGLQALFR
                     LDRATARSLFEQALREDSTFAMAALYAAKANRDWGELLVLIQHAHRLADRASERERFL
                     IRAQAAIMLSDPALNGYIDSLVTRFPGEIEGYLFAGIARIGVGEFLGALPYLERVVEM
                     DSASLAPAGGECRACDALFQMVGAYQAMDSLAAAERMARRMTRLVPQWPNGWRTQWEV
                     LSILGKYDEAQEAAIAFDQLWPTLNFAMLSRAQFLIRGGRGSEAASLLAEEAANSAGE
                     RRAEALWFQAIALREAGRLEEAVEIARRYRRETVPISEGLGVATSSPMLLGMALEQAG
                     QGRAAAALFDSIAAHVFPSSNRSHAARTRAWVLTQAATALAAAGDTSRLAGLADSIRD
                     IGAGSSFVRDWRLHRHVRGLLLAARGQDSLALDEFHASFFSLTMGYTRTNVEAARLHL
                     KRGEARQAVALLEPALRGSLEASNLYVARRTIHTLLVQAWTMLGDRERAAEHRRLAAG
                     N"
BASE COUNT          631 a         1223 c         1214 g          520 t
ORIGIN      
        1 ggggaccccc tcggggcacc ccgacacagt tctccccggc tggaccggat ccatgacccc
       61 cgagagcgag cagctggtac agcagagctg gtccctggtc tcccagcgaa gcatggccct
      121 ggccgagcgg ttctacggcc ggctgttcga gatcgcaccg gagcagcaac ggctgttcgc
      181 cgtcaccgac atgctaaacc aacagcgcaa gttcatcgcc atgctccagg agatcgtccg
      241 gcggatcggg actcccgacc agctggttcc cgaggtggca gccctgggcg cccgccatgt
      301 gggatacggg gtcacggcga aggactacgc tgtggtgggc gaggcgctga tatgggccct
      361 ggagcaggag ctggggccgg ccatgactcc cgagctccgc caggcatgga aagaggcgta
      421 cctgctcacg gcccgcctca tggggcgtgg ggcggacgtg aggccggccg cgccggtaac
      481 tgaggactga ccgcctggcg actaccgatt gccgacgact ccccctgacg acgtattcgc
      541 agcgagaagg ccggatcatc gatgaaccgg cgagcgacat cgttgatccg gtaccgctcc
      601 cgcgcggcct ccaccgggag agtggtgtcg atcaatccca accgcactcc cacttcgtcg
      661 atatccccgg gaaagacggt cttccagctc gccgggatgg cgtccggcac gatccggttc
      721 acctgatcga cgatgttcga agtgcagttg ctggtgaggg tatggtagaa ctccgggcga
      781 tgacgcagcc cttcagcccg ctcgagcatc gcgccgaaca atgcgcggat ctgctctcgc
      841 ggtgccttga ccggatagag atagacgggg tagcgctgga atgccgcccg ctggccgatc
      901 aggtcccgtt cgtccccgat cacatacatc agttcgtagc gacgcaacat gccccagagc
      961 gggttgtagg tttcgcccgg ctctttgcgc gcctcgaccg aaatggcaac aaactgggaa
     1021 tcggcaaagc cgaacgtgag gaagctgtgc gccggacccc gccagctctt cgcgaagggg
     1081 gtcaggacga accacaggtc ggtgagctgg tcgaggtcgt accgccgctc gacgtaggat
     1141 ggcgtaaagc ggtcggggcc ggtgtaggcg aagttgcgga ccccggacag gtggacgatc
     1201 ggaccctcca accggaccga cggcagcacc gcctgttccg gaatccactc ccggtcgttg
     1261 ctgggtcggc gggtgaccca aatggtgagc aggctggcgg cagtcgccag cagggcaacg
     1321 cggaacccgg ggcgcgggag tttcacgtcg ttgccgtctg ctagttgccg gcggccagac
     1381 gacggtgctc tgccgcccgc tcccggtctc ccagcatggt ccaggcctgt accagtagtg
     1441 tgtgaatggt ccggcgcgcc acgtacaggt tggacgcctc gagcgatccg cgcagcgccg
     1501 gctcgagcag ggccaccgcc tggcgggcct cgccccgctt cagatgcagt cgagcagcct
     1561 cgacgttggt gcgggtgtac cccatggtga gcgaaaagaa cgaggcgtgg aattcgtcca
     1621 gcgccagcga atcctggccc cgggcggcca gcaacagacc ccggacatga cgatgcagcc
     1681 gccagtcccg cacgaagctg gacccggcac cgatgtcgcg aatgctgtcc gccaggcccg
     1741 cgaggcggga ggtatcgccg gcggcggcca gagcggtcgc tgcctgagtc agcacccagg
     1801 cccgggtgcg ggccgcatga gagcggttgc tcgacggaaa cacgtgcgcc gcgatcgagt
     1861 cgaacaacgc ggcggccgca cgtccctgtc cggcctgctc cagcgccatg ccgagcagca
     1921 tgggactgga ggtagcgaca ccgagtcctt cgctgatggg gaccgtctca cgccggtagc
     1981 gtcgcgcgat ctccaccgct tcctcgagcc ggcccgcttc gcgcagcgcg atcgcctgga
     2041 accagagtgc ctcggcccgt cgctcgccgg ccgagttcgc cgcttcttcc gcaaggagcg
     2101 aggccgcctc ggagccccgc cccccccgga tcaggaactg ggcccgggac agcatcgcga
     2161 agttcaaggt gggccaaagc tggtcgaagg cgatcgcggc ctcttgcgct tcgtcgtact
     2221 tcccgaggat gctgagcacc tcccactggg ttctccagcc gttgggccat tgcgggacca
     2281 accgggtcat tcgccgggcc atccgttccg ccgccgccag cgaatccatc gcctgatagg
     2341 cgccgaccat ttggaatagc gcgtcgcagg cgcggcattc accgccggcc ggtgccagcg
     2401 aggccgaatc catctcgacc acccgctcca gatagggcaa cgcccccagg aattccccca
     2461 ccccgatgcg ggcgattccg gcgaagagat agccctcgat ctccccggga aaccgggtga
     2521 ccagcgagtc gatgtaccca ttgagcgcgg gatcgctcaa catgattgcg gcttgagccc
     2581 gaatcaggaa ccgctctcgt tcgctggccc ggtccgccaa acggtgcgcg tgctggatca
     2641 ggaccaggag ctccccccaa tcgcggttgg ccttagccgc atagagcgcg gccatggcaa
     2701 aggtggagtc ctcccgcagg gcctgctcga acaggctccg agccgtggcc cggtccagtc
     2761 ggaacagggc ctggagcccc tgctcataca gccggtaggc ggcaatcgag ctggtggtga
     2821 gagccgcgat ggacccgcgg ggagcttcga agcccattcc ggcgagcagg accgcggtgg
     2881 cggagtccgc cagggcgaac ggatccgccg cctgagcccg ggcggaaccc aggacctcgc
     2941 cgttccgaag atccagccgc cgcaggtcga gccgaaggag accgtccgga agctgataga
     3001 gcgcgccgtc gatcagctga gacgccccgg ctcggcgcgc cacctcggcc caggtgctga
     3061 tgggaagatc ggactccgat accgggccgc ccagcagttc gtacatccgg gcggtgctca
     3121 cgacgcgcag cgccggtgac cggcccaggg cggtggccag caagtccacc agagggcccc
     3181 gcagttcttc gcgaggcagc gtgcgatagt ccgccaatcg gccgatcgag agcgtaggtg
     3241 ggtcgcgccc cgcaccagcc catcgaattc ccaccccgag caagaccaac ccaaccgccg
     3301 ctgatccgat aagcagggcc cacggcaccc ggtggggaac cgcaaccggc ccaaccggat
     3361 gaaccgagac gggggcgggc gcgacagcgg gagctccgga gggcatcggc ggtgccggcg
     3421 ccgaaggagc ggcaacgatc tgcccggata gcaagccggc gttgacgctc tcaacctcgc
     3481 gatccggggg aagctcgagt tcatccacca gagccgtctg gaagctgcgg ccgtgttgca
     3541 gtgctccgct ggtatcgccg gccgctatca gcgcccgcat cagggccg
//
LOCUS       DASWKS010000630         2051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2941724, whole genome shotgun sequence.
ACCESSION   DASWKS010000630 DASWKS010000000
VERSION     DASWKS010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2941724"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1924)
                     /locus_tag="VGA78_17960"
     CDS             complement(173..1924)
                     /locus_tag="VGA78_17960"
                     /inference="COORDINATES: protein motif:HMM:NF025309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate mutase L"
                     /protein_id="HEX9895823.1"
                     /translation="MSTIMEADTLLAVDVGTVNTRASLFDVVDGRYRMVATGRASSTA
                     GSPLFDIREGMHMAVEELNAVTGRPLLDEGDSLIIPTTSEGAGVDAFVATSSAGPRPR
                     TVLVGLMPGVSMESARRLAGSTYLNVVEEIGLLDRRREEEQIDVLVAAQPDVILMVGG
                     TDGGASASVLRMVELVGLVVGLLSTAQRPSLVFAGNRALGAAVSEYFQERAPVTIVPN
                     IRPSLDVEELEPARLKLSEIIRQLRAGKIGGFEDLAAWSGGSMMLTGDAFGRVVRYLS
                     QVYDPDKGVLGIDVGASHVTVAAAFDGNLNLRVNSDLGLGSSMPGLMRYASIEDISRW
                     LPGEEPAGKVRDYLYNKALYPGSVPTELGELHIEYALVRELIRTGIALARGDWQKGAE
                     TALLPALEPIIASGGAIARAPRPGYAALALLDAVQPKGVTTLVLDPHNLIPAVGAAAG
                     LLPMITVQVLESGSFVSLGTVVSPVGHARQGRPVMRVRVEPEGGGEMSEGAVRFGQIV
                     LLPLRQGEHARLTVRPESGFDVGFGGAGKAGALRVAGGALGVIIDARGRPLELSKDPV
                     ERQEMNLKWLKEVGALK"
BASE COUNT          360 a          740 c          627 g          324 t
ORIGIN      
        1 gcggctgcac ttccgcaacg acgtcggcag gttggacctt ctcccgcacc ctaaccgtca
       61 cggtccccgg cgaggggagc ttgcgctcca gctggaccgt cgtcagcgga aggacatgtc
      121 gaagcgcagg tagctggttg ccggccatcg tcagctcaga ggctccatgc catcacttca
      181 gcgctccgac ctctttcaac cacttcaggt tcatttcttg gcgctcgacc ggatctttgg
      241 aaagttccag cggccggccg cgggcatcga tgatcacccc gagagcaccc cccgccactc
      301 tcagcgcccc ggccttccca gccccgccga atccaacgtc gaacccgctc tccggccgga
      361 cggtcagccg ggcgtgctcg ccctgccgaa gcggcaagag cacgatctga ccgaagcgga
      421 ctgccccctc tgacatctcg cctcccccct caggctctac tcggacccgc atcaccggcc
      481 gcccctggcg ggcgtggccc accggggaga ccaccgtgcc tagactgaca aaactgccgg
      541 actcgagcac ctgtacggta atcatgggca gcaggccggc ggcggcgccg accgcgggga
      601 tcaggttgtg cggatccagc accagggtcg tgaccccctt cggttggacc gcatccaaca
      661 gggccagggc cgcgtagccc ggccgagggg cgcgagcgat ggccccgccg ctggcgatga
      721 tcggctccag cgcgggcagc aaggcggtct cagctccttt ctgccagtcg ccgcgggcaa
      781 gggcaatccc ggtccggatc aactcgcgga ccagggcata ctcgatgtgc agctcgccca
      841 gttcggtcgg gacgctgccc ggatagaggg ccttgttgta gaggtaatcg cgcaccttgc
      901 cggcgggttc ctcgcccggc agccagcggg atatgtcctc aatcgaggcg tagcgcatga
      961 ggcccggcat cgacgatccg agtcccaaat ctgaattcac ccgcagattc agattcccgt
     1021 cgaaagccgc cgccacggtc acatggctgg cgccgacgtc gatcccgagc acccctttgt
     1081 ccgggtcgta cacctggctc aggtagcgca ccacccgacc gaacgcgtcg ccggtcagca
     1141 tcatcgagcc gcccgaccag gccgccaaat cctcgaagcc gccgatcttg ccggcccgga
     1201 gctggcggat gatctccgac agtttgagcc gggcgggctc gagctcctcc acgtcgaggc
     1261 tggggcgtat attcgggacg atagtcaccg gggcccgctc ctgaaaatac tcggataccg
     1321 ccgctccgag ggcgcggttt ccggcgaaca ccaggctcgg ccgctgggcg gtggacagca
     1381 agccgaccac caggccgacc agttcaacca tccgcaacac ggaggcgctt gcgccgccgt
     1441 cggtgcctcc gaccatcagg atcacgtccg gctgggcagc gaccagcaca tcaatctgtt
     1501 cctcttctcg gcgtcggtcc aacaacccga tctcttccac cacattcaga tacgtcgaac
     1561 cggccagccg gcgggcgctt tccatcgaca cccccggcat gaggccgacc agcacggtgc
     1621 gcggtcgggg cccggccgag cttgttgcca caaacgcatc gaccccggcc ccttccgagg
     1681 tggtgggaat aatgaggctg tcaccttcat caagcaacgg ccggccggtc accgcgttca
     1741 gttcttcgac cgccatgtgc atcccttcgc ggatgtcgaa cagcggagag ccggcggtcg
     1801 atgaggcccg gccggtcgcc accatccggt agcgaccgtc gacgacgtca aacaggctgg
     1861 cccgggtatt gaccgtgccc acgtccaccg ccaggagcgt gtcggcttcc atgatggtgc
     1921 tcaccggatc acccgctgac gccgatcaga ttcgagaggg tatctcggag gaactgaacc
     1981 cgctcggcga ggacgatcag gctggccgcc accgcgcccg cgtacatcac tccgaaggtg
     2041 atcgcaatga a
//
LOCUS       DASWKS010000631         1696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2943099, whole genome shotgun sequence.
ACCESSION   DASWKS010000631 DASWKS010000000
VERSION     DASWKS010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2943099"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VGA78_17965"
     CDS             <1..229
                     /locus_tag="VGA78_17965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895824.1"
                     /translation="TSLPSAPGYLGTFDAPGIAVLVAYGVTKPLATAYTLVLHAALWL
                     PITLLGAYYLARESIGWSAVRAELAQEAAVR"
     gene            345..1637
                     /locus_tag="VGA78_17970"
     CDS             345..1637
                     /locus_tag="VGA78_17970"
                     /inference="COORDINATES: protein motif:HMM:NF005560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX9895825.1"
                     /translation="MKKVAIIGAGAGGLVAGYDLARAGRQVTVFEAESYVGGLASGFK
                     APHWEWSVERFYHHWFASDRHILGLIDELGWTDRVIFPRPVTVVYHAGTFYPLDSPLA
                     VLRFPGIPFIDRLRIGVVIAYLRYLSPWQPLERTTAHAWLSSRVGRRAYESLWEPLLV
                     GKFGPHYQDVNMAWFWARVKARTPRLGTFQGGFQAFMDRLAEEARRLGVTIHLGTPVE
                     RIEPSPTGGLRLQVRGERQEFDQVLVTTSPALLARLTPTLPDPYLQGLLALKSMGAVV
                     MVLALRQRLSEQGHYWHNLPKAAGFPFLSLVEHTNFVPPEHFGGDHIIYCGDYLDPSH
                     EYFKLTQPELLERFLPALPRFNPSFQPDWVKQSWLFRTPYAQPVPPVNHSRSIPDLRT
                     PVPGLWLASMSQVYPWDRGTNFAVEIARKAAGRMLSEP"
BASE COUNT          248 a          599 c          544 g          305 t
ORIGIN      
        1 caccagcctc ccgtcggctc ccggctatct cggcaccttc gacgcgccgg ggatcgcggt
       61 cttggtggcc tatggcgtca ccaagccgct ggccaccgcc tacactctgg tgctgcacgc
      121 ggcgctttgg ttgccgatca cgctgctcgg cgcctactac ctggcccgcg agagcatcgg
      181 ctggagcgcg gtgcgggccg agctcgcaca ggaagcagcc gtccgatgag gggcagggcg
      241 actccacttc ccacggccca gcgctcggcc caccgcacgg tccgccgcac ggcccacgcc
      301 acggtccacc gtgtggccca cccctggtcg gcggccgcca gcttgtgaaa aaagtcgcaa
      361 tcatcggcgc cggggccggc gggctggtcg ccgggtatga tctggcccgc gccgggcggc
      421 aagtgacggt cttcgaggcc gagagttacg tcggcggatt ggcgtccgga ttcaaagcac
      481 cccactggga atggtcggtg gagcgcttct accaccactg gttcgccagc gatcgccaca
      541 tcctgggatt gattgacgag ctgggctgga ccgatcgggt gatcttcccg cgtccggtga
      601 cggtcgtcta ccacgccggc acgttctacc cattggattc gcccctcgcc gtgctgcgct
      661 ttccgggcat cccgttcatc gatcggctgc ggatcggggt cgtgattgcc tacctgcgtt
      721 acctctcgcc gtggcagccg ttggagcgga ccaccgccca tgcgtggctc tccagccggg
      781 tcggccggcg ggcttacgag tcgctctggg agccgctgct ggtcgggaaa ttcgggcccc
      841 attatcagga cgtcaacatg gcctggttct gggcccgggt caaagcccgc acccctcggc
      901 tcggcacctt tcagggcggc ttccaggcct tcatggaccg gttggcagag gaggcccggc
      961 gcctcggggt cacgatccac ctaggtaccc ccgtcgagcg gatcgagccc tcccccacag
     1021 gtggactgcg gctgcaggtt cggggagagc ggcaggaatt cgatcaggtc ttggtcacca
     1081 cctcaccggc gctgctggcc cggctcactc cgaccctgcc ggatccctac ctgcagggac
     1141 tgctggcgct caagtcgatg ggcgcggtgg tcatggtgct cgccctgcgg cagcgcctct
     1201 cggagcaggg gcactattgg cacaacctgc cgaaagcggc cggctttcca ttcttatcgc
     1261 tggtcgagca caccaacttc gtgccccccg agcatttcgg cggggaccac atcatttact
     1321 gcggcgatta cctcgacccc tcccacgagt acttcaaact gacccagccc gagctgctgg
     1381 agcggttcct gccggcactg ccccggttca atcccagttt tcagccggat tgggtcaagc
     1441 agagctggct gttccgcact ccctatgccc aaccggtgcc gccggtgaat cactcccgct
     1501 cgatccccga cctgcgcacc ccagtgcccg gcttgtggct ggcgagcatg agccaggtct
     1561 atccatggga tcgggggacg aacttcgcgg ttgagatcgc ccgcaaggcc gccggccgga
     1621 tgttgtccga accctgatcg gccgccgcgg cggcgcggtg acgcgaacca agcatctccg
     1681 actgcaggcc gggtta
//
LOCUS       DASWKS010000632         7695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2568401, whole genome shotgun sequence.
ACCESSION   DASWKS010000632 DASWKS010000000
VERSION     DASWKS010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7695
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2568401"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1361..2209
                     /locus_tag="VGA78_17975"
     CDS             1361..2209
                     /locus_tag="VGA78_17975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895826.1"
                     /translation="MYVRERASSNLGLLPAGADARTAFRALTTGTAMHRAARLSPDER
                     RLTFLRTEPSGQIMAVLPLDGDEPIMEIAVVGEANDVAWSPVDDRVAIAGSNDGITLG
                     IRIFRPGSAEQRDYLMGLVGADLDWAPNGQILYQRSGNQRFAMLDPATGHDSLLIQPG
                     EQGWVFRPRVSPDGRNLAFLWNRDGELGLWVSLLGDTATRRLAPGDLRPLRWSRDGRR
                     LWAAERPVGDNRERLVEVIYPEGTRRVRDTLPPGFELSDMTRDGRRLIVIRRERQSDA
                     WLIELP"
     gene            complement(2491..2898)
                     /locus_tag="VGA78_17980"
     CDS             complement(2491..2898)
                     /locus_tag="VGA78_17980"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX9895827.1"
                     /translation="MRLSTAGRIMSWICQLVAAGILSQTLYFKFTGAPESRYIFSTLG
                     IEPWGRIGTGVLEVVAVVLLLLPRTAALGALLAAGLMGGAIVAHLTMLGIEVQGDGGL
                     LFGLALAVLLVSLAVLALRYRELPIIGPRLQTQ"
     gene            3146..3535
                     /locus_tag="VGA78_17985"
     CDS             3146..3535
                     /locus_tag="VGA78_17985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895828.1"
                     /translation="MRILKTLALTALTALVGVTLVAARPAPITSKPFKGLKANTGTVS
                     ADKVNGRIVLTLSGDFQAPDAPDPHWQVVDSKGNVYLLNKLSIKDGKMNRSVTLPVYV
                     KDVSKVQMWCAFVEVLLGEAEFEAVVK"
     gene            3547..4497
                     /locus_tag="VGA78_17990"
     CDS             3547..4497
                     /locus_tag="VGA78_17990"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX9895829.1"
                     /translation="MTRPVARSPPAFVMAADSEEDTVPQHLRTLAGMAFTLGTAPLAA
                     QVTTTPDLNLEGARRVLAAALTHAREHQAPGAAIAVVDRGGYVLALERLDGTFPAGAD
                     ISIGKARTAVRFQRPTRVFEEIIRNGRTPMIALNELVGFTPLMGGVPIEVNGTIVGAV
                     GVSGAASAQQDEEIAVAASKALGTAPMAGEAGMTPVAYFEKRAVEAAFAKGDVLVDGS
                     NGRNYMVHASRRETPGQVEVHQQDTDIIHVLSGSATFVTGGTLTDGKMTGAGEIRGAT
                     VTGGETRTIKPGDVLVVPKGTPHWFKEVKGPLTYYVVKVR"
     gene            4507..6156
                     /locus_tag="VGA78_17995"
     CDS             4507..6156
                     /locus_tag="VGA78_17995"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX9895830.1"
                     /translation="MRALVVLAVGLGSGLVPARAVGQATAAVPARRPAAVVDLRTEEG
                     ARLVAGQWRFSEARIIEVDHRLPGPDLRPSGPPNRTRDITPQAGAAGFDDARWQPIGA
                     TTLEDRRGGGRLSFAWYRIKVTIPNRIGGFDPTGSTVVLETVVDDYAEIYVDGQLPLV
                     LGSSGGHLPGGWNAPNRVVVGRDVRPGQSFQVALFAMNGPVSQPPGNYIWIRSATLDF
                     HPAGKTGNTSQAELKLTRLDPALDQLLPQEVRLEKLAGGFTFSEGPVWTPDQAFLFSD
                     PNDNTIYRWSRDGQVTVFRTKSGYAGVDIGEYGQPGSNGLTLDAEGRLVIAEHGRHRI
                     SRLEKNGVITVLAERYQGKRLNSPNDLVYRSDGTLYFTDPPFGLPKYHQDPRRELPFA
                     AVYRLSPDGTLSVATTDLSGPNGIAFSPDERFLYVSNWDPKRKVIMRYPVAPDGSLGS
                     GTVFFDITTTGPGDLAWDGLKVDRQGNLYAAGPLGIYLISPEGKQLGTLSLPEHVANF
                     AWGDADRRTLYVTASTGIYRLPMNVAGTGAFFDRVAMTGGR"
     gene            6412..>7695
                     /locus_tag="VGA78_18000"
     CDS             6412..>7695
                     /locus_tag="VGA78_18000"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX9895831.1"
                     /translation="MTSNGHYDVIIIGSGAGGGTLAHRLAPSGKRVLIIERGDYVKRE
                     PENWSPRAVNLEARYNTKEQWFDRKGKPLHPHTNYYVGGNTKFYGAALFRMRREDFGE
                     VRHHGGISPAWPISYEELEPYYLEAEHLYQVHGRRGADPTEPAASGPYLHPPVSHEPR
                     IQQLHEDLAGLGLHPFHVPLGIQLDEAHPRRSPCIRCSTCDGFPCLIGAKSDAQTLCV
                     DPALEHPNVSLLTNALVTRLETSPSGRDVTGVRVRQNDSESVLRANLVVVSAGAINSA
                     ALLLRSAGERHPRGLANGSDTVGRHYMGHTNSVLMAISKCPNPTVFQKTLAVNDFYFG
                     SPEWPYPMGHISFVGKLDGVTLSAGAPAIAPGFTLDLMAKHSLDFWLTSEDLPDPENR
                     VTLDRNGNIVLSYTPNNEAGHRRLIKKLEHLMQQTT"
BASE COUNT         1286 a         2634 c         2568 g         1207 t
ORIGIN      
        1 gcccatgagc ggggtgtcgt ccaccgggac ctcaagccgg agaacattct gctttcaggt
       61 cgtcacgccc tggtaagcga cttcggcgtg gcgcgcgccg cgagattggc cgccgaggga
      121 gagcagcccc tcacggtggg ggtggcgctc ggaactccgg cgtacatgtc gccggaacag
      181 gcggtggcga gtcccgacgt cgaccatcgg gctgacattt atgcgattgg ggtcctgggg
      241 tatgagctca tcgccgggcg ggctccgttc accgccccca ccctgcaaga agtgctgacg
      301 atgcatgtgg cggtgcgccc cgaaccgctg gagtcgcatc aaccggacat tccgccggag
      361 ctcagtcggg tcatcatgcg gtgcctcgag aagcggccgg aggagcgctg gcacagcgcc
      421 tcggagctgg tcgcggtgct cgagcccttg gctaccccga gtggggggat cacccccacc
      481 ggaatcgcgc caacccaacc accaacgcga cggtggtgga gagtggcggc gctggtggca
      541 gcgctggggg cggtggcggt cgtatttcgc ccgcggtccg cggagcctgg gcctcccgcc
      601 ggggtcaccc agcagcagct caccttcctg ggcaacgtga tcgatgccgc gccgtcgccc
      661 gacgggatgt tcctggccta caccatcgag gattccatga gccagcggat cctggtccgg
      721 gatctcctgg gcggtaacgt cgtgacggcg gccacggcac cgtctttcgt cggcatggcc
      781 tggtcgccgg acggtttgga gatccgatac gcgacctacc gacccgaaag gggaatcttc
      841 gccgtgccga ggctgggcgg caccgcccga cccctcagtc ctgactacgg cgtcccgtcg
      901 cctgacggtg cccgccaggc gtggatccgg agcgccccca aagcggtgaa aatcaggggc
      961 ccgggagcca cggactcgat cgcgatcgag ctgccgttcg attacctatg gcccctctcg
     1021 ccggcctggt ccccggacgg cgggaaactc gcgattccgc tcctcagccc gggcggccgg
     1081 cgctccagtc tcgcggtggt ggccgcccgg ggagaacggc cgccccacga gatcgcggtc
     1141 gattcgatgg cgaagctggc ggcggtctgg gctcccgacg ggcggtcgat ctactacctg
     1201 gcgctccgag ggagagtcgc ggtgctgttc cgttgcgagg tcgatgaggc cggtcgagcg
     1261 cgcggccggc cggtggaaat cgtctcgggg ctggagccgg ggatgaacag catgaaacgc
     1321 ggcggcccgg ctggcaatct ccggcgacgg ccgccggctg gtgtatgtgc gggagcgggc
     1381 gtcctccaac ctgggcctgt tgccggccgg agcggacgcg cggaccgcgt tcagggccct
     1441 gacgacgggc accgccatgc accgggcggc ccggctttcg ccggacgagc gccggctgac
     1501 gttcctccgg accgaaccat cgggacaaat catggcggtc ctgccgctcg acggcgacga
     1561 acccatcatg gaaatcgcgg tggtcggcga ggccaacgac gtggcgtggt cgccggtgga
     1621 cgaccgggtc gcgatcgccg ggagcaacga cgggattacg cttggcatcc ggatcttccg
     1681 tccaggatcg gcggaacaac gcgattactt gatgggtctg gtcggggcgg atctggactg
     1741 ggcgccgaac ggccagatcc tataccagcg gagcggcaac cagcggttcg ctatgctcga
     1801 tcccgccacc ggccacgaca gcctgttgat ccagcccggc gagcagggct gggtattccg
     1861 cccgagggtt tctcccgacg ggcgaaatct tgccttcctc tggaaccggg acggggaact
     1921 gggcttgtgg gtatcgctgc tgggcgacac cgcgacgcga cggctggccc cgggtgacct
     1981 ccgaccgctg cggtggtctc gtgatggccg gcggttgtgg gcggcggaac gaccggtcgg
     2041 agacaaccgt gagcggctgg tggaagtgat ctatccggag ggcacccggc gggtgcgcga
     2101 cacgctcccg ccgggattcg agctcagcga tatgacccgc gacggacgca ggctgatcgt
     2161 catacgacgc gagcggcagt ccgatgcctg gttgatcgag ctgccgtagc tgcttcacac
     2221 gctggcaggt tcaaccaggc cggcttcacc cgccctgaca aattcctccc agggagcagg
     2281 aaggagggag cagggagtgg gagtgaagag cccgccgtct agacagtgcc tgctccctgc
     2341 tccctcctcc ctcctccctc ctccctgctc cctgctccct attcgcacgc ggatacggcc
     2401 tgactgattc atccaccaca aaagaagacg cgttattccg gtgcatccgg ggtatccgtt
     2461 tcaaccatgg aacgtagctg gccgctggac tcactgggtc tgcagcctcg gaccgatgat
     2521 gggcagctcg cggtagcgga gcgccagcac cgccagggac accagaagca ccgccagggc
     2581 caacccgaac aacaggccgc catctccctg aacctcgatg ccgagcatgg tgaggtgagc
     2641 cacgatggcg ccgcccatca ggccggcggc cagcagcgcg ccgagcgcgg ccgttcgggg
     2701 cagcaggagg agcaccacgg ccaccacctc gagtaccccg gtcccgatcc ggccccacgg
     2761 ctcgatgccc agcgtcgaga agatgtagcg cgactccggc gcgccagtga acttgaagta
     2821 cagcgtctga gagaggatcc ccgccgccac cagctggcag atccagctca tgatccgccc
     2881 cgcagtgctc aacctcatca tcgccgtcgc cccttggtca gtggttgatc cggcgcgggc
     2941 cgaagcccgc tcacgcctgc aagctcgagt gtaaatcgcc cgggggcggc aaagttccat
     3001 atcaccgccg gttccgggat tctcctccag actggaacct tcctccacct cgccgcattc
     3061 atggccccgt cacggccggc gcactggggc gatcggccga accggatggt ccattcccag
     3121 gctcactcga cggaggcact ctcgcatgcg catcctcaag acgctggcgc tgaccgcgct
     3181 cactgcactg gtcggtgtca cgctcgtcgc ggcccggccc gcgccgatca ccagcaagcc
     3241 cttcaaaggc ttgaaggcca acaccggtac cgtctcggcc gacaaggtca acggccggat
     3301 cgtgctcacg ctctcgggcg actttcaggc gcctgacgca cccgatcccc actggcaggt
     3361 cgtggactcg aaggggaacg tctacctgct gaacaagctg tccatcaagg acggcaagat
     3421 gaaccggagc gtgacccttc cggtatacgt gaaggacgtg tcgaaggtgc agatgtggtg
     3481 cgccttcgtt gaagtcctgc tcggcgaggc cgagttcgaa gccgtcgtca aataaccatc
     3541 cgtggcatga ccaggccggt ggcgcgctcg ccgccggcct tcgtcatggc cgccgactcg
     3601 gaggaggaca ctgtgccgca acatctcaga actctggccg gcatggcctt taccctgggg
     3661 accgcgcctc tcgccgccca ggtcaccacc acgcccgacc tcaacctgga aggggcccgg
     3721 cgggtgctgg ccgccgcgct gacccatgcc cgggagcacc aagcgcccgg cgccgccatc
     3781 gccgtggtcg atcggggcgg ctacgtcctc gcgctcgagc gcctggacgg aaccttcccc
     3841 gcgggagcgg acatctcgat cgggaaggca cgcaccgcag tccggttcca gcggccgacc
     3901 cgcgtgttcg aggaaatcat ccggaatggc cgaactccca tgatcgcgct caacgagctg
     3961 gtcgggttca cgcccctgat gggcggcgtg ccgatcgagg tgaacggcac gatcgtcggc
     4021 gcggtcggcg tcagcggcgc ggccagcgcc cagcaggacg aggaaatcgc ggtggcggcc
     4081 agcaaggccc tcggcactgc ccccatggcc ggcgaggccg gcatgacgcc ggtggcgtac
     4141 ttcgaaaagc gggccgtgga ggccgcgttc gccaagggtg acgtgctggt cgacggatcc
     4201 aacggccgga actacatggt gcatgccagc cggcgcgaaa caccgggcca ggtcgaggtc
     4261 caccagcagg acaccgacat catccacgtc ctgtcgggat cggcgacgtt cgtcaccggt
     4321 ggcacactca ccgacggcaa gatgaccggg gcgggcgaga tccggggtgc gaccgtcacc
     4381 ggcggagaga cccgcaccat caagccgggc gatgtgctgg tggtgcccaa ggggacgccg
     4441 cactggttca aagaggtgaa gggcccgctc acctattacg tcgtcaaagt tcgttaggag
     4501 acatcgatgc gcgctctcgt tgttctggcc gtgggcctcg gcagcggcct cgttcccgcc
     4561 cgcgcggtgg ggcaggccac tgccgccgtc ccggcccgcc gtcccgcggc agtggtggac
     4621 ctccgaaccg aggagggtgc ccggctggtt gcaggccagt ggcgattcag cgaagcccga
     4681 atcatcgagg tggatcaccg gctacccggc cccgacctcc ggccctcggg gccgccgaac
     4741 cgaaccaggg acattacgcc tcaggccggc gccgccggtt tcgacgacgc gcggtggcag
     4801 ccgatcggcg ccaccaccct cgaggaccgc cggggcggtg gccggctgtc gttcgcctgg
     4861 taccggatca aggtgacgat ccccaaccgc atcggcggct tcgatccgac cgggtccacc
     4921 gtcgtgctgg agaccgtggt ggacgactac gccgagatct acgtggacgg gcagcttccg
     4981 ctggtcctgg gaagcagcgg cgggcacctc cccggcggct ggaatgcgcc caaccgggtg
     5041 gtggtcggcc gtgacgtccg cccgggtcag tcgttccagg tcgcgttgtt cgcgatgaac
     5101 ggcccggtgt cgcagccacc cgggaactat atctggatcc gctccgcgac cctcgacttc
     5161 catcccgctg ggaagaccgg caacaccagc caggccgagc tcaagctgac ccggctcgac
     5221 ccggcactcg atcagctgct cccacaggag gtccggctcg agaaactggc agggggattc
     5281 accttctccg aggggccggt ctggactccc gaccaggcgt ttctcttcag cgaccccaac
     5341 gacaacacca tttaccgctg gtcccgcgac ggacaggtca ccgtcttccg gaccaagagc
     5401 gggtacgccg gagtggacat cggtgagtat ggccagcctg gatccaacgg cctgaccctc
     5461 gacgctgaag gccgtctcgt catcgcggag cacggccggc atcggatttc gcggctggag
     5521 aagaacggag tgatcacggt cctggccgag cgataccagg ggaagcggct caacagcccg
     5581 aacgatctgg tgtatcgctc cgatggaacc ctctacttca ccgatcctcc cttcgggctg
     5641 ccgaagtatc accaggaccc tcggcgcgag ctgcccttcg ccgcggtgta tcgcctatcg
     5701 cccgatggaa ccctgtcggt cgcgacgacc gacctgagcg gacccaacgg gatcgccttc
     5761 tcgcccgacg aacggttcct ttacgtgagc aactgggatc cgaagcggaa agtgatcatg
     5821 cgataccccg tggcgcccga tggatcgctc gggtccggga ccgtcttctt cgatatcacc
     5881 accaccgggc ccggggacct ggcctgggac ggcctcaagg tggaccggca gggcaacctc
     5941 tacgcggcgg gacctctcgg gatctacctg atctcccccg aggggaaaca gctgggcacc
     6001 ctcagcctgc cggagcacgt ggccaacttc gcctggggtg acgcggaccg gcggacgctg
     6061 tacgtcaccg cctcgaccgg catctaccgg ctgccgatga acgtggccgg cacgggcgcg
     6121 ttcttcgacc gggtcgccat gacgggggga aggtagggtg gaaccttccc gcgggcatcc
     6181 tcattcaagc tccaccatga gcgacctgcc cttccactcc atccttttcg acgccgctcg
     6241 tcccggacgg ccggtctatt tccggctcgg ttcgtggccc cggggccggt gggtggcatt
     6301 caaacggggc tctggacggg cactggtgct ggttggcggc cggaaggtcc gccatccggc
     6361 acccctgcaa tggcgttccg ccaccacgcc cttgacggag gaaagccagt catgacctcc
     6421 aacggccact acgatgtcat catcatcggt tccggagccg gcggcggtac cctggcccac
     6481 cggctggcgc cttccggcaa gcgggtgctg atcatcgagc ggggggacta cgtcaaacgc
     6541 gagccggaaa actggagccc gcgggcggtc aacctggagg cacgctacaa caccaaggag
     6601 cagtggttcg atcgcaaggg gaagccgctg catcctcaca ccaactatta cgtgggcgga
     6661 aacaccaagt tctacggggc cgccctcttc cggatgcggc gcgaggactt tggcgaggtg
     6721 aggcatcacg gcgggatatc gcccgcctgg ccgatctcat acgaggagct ggagccctac
     6781 tatctcgagg ccgagcatct gtatcaggtg cacggccggc gcggcgcgga cccgaccgag
     6841 ccggcggcca gcgggcctta tctccatccc ccggtcagcc acgagcccag aatccagcag
     6901 cttcacgagg atctggcggg gctgggattg catcccttcc acgtcccgct cgggatccag
     6961 ctcgatgaag cgcatccgcg ccggagtccc tgcatccgct gctccacttg cgacggcttc
     7021 ccctgcctga tcggggccaa atccgacgcc cagaccctct gcgtggatcc ggcgctggag
     7081 caccccaacg tctcgctcct gaccaatgcc ttggtgaccc ggctcgagac cagtccctcg
     7141 ggccgggacg tcaccggcgt ccgggttcgc cagaacgact ccgagtcggt gctgcgtgcc
     7201 aacctggtgg tggtctcggc cggcgccatc aattcggccg cgttgctgct ccggtcggcc
     7261 ggcgagcggc atccgagagg actggcgaac gggtccgaca ccgtgggccg gcattacatg
     7321 gggcacacca attcggtcct catggccatc tcgaagtgtc ccaaccccac cgtctttcag
     7381 aagacgctgg cggtcaacga tttctatttc ggatcgccgg agtggcccta ccccatgggc
     7441 cacatctcct tcgtgggcaa gctggatggg gtgacgctct cggcgggcgc gccggccatc
     7501 gcgccggggt tcaccctgga cctgatggcg aagcattcgc tcgacttctg gctcacttcg
     7561 gaggacctgc ccgatccgga gaaccgggtg acgctggacc ggaacgggaa catcgtcctg
     7621 agctacacgc cgaacaacga agcggggcac cggcggctga tcaagaagct ggagcacctg
     7681 atgcagcaga ccacc
//
LOCUS       DASWKS010000633        10026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2944807, whole genome shotgun sequence.
ACCESSION   DASWKS010000633 DASWKS010000000
VERSION     DASWKS010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2944807"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VGA78_18005"
     CDS             <1..288
                     /locus_tag="VGA78_18005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895832.1"
                     /translation="QYLPFAPLAHWQQNFWDYRNDFAFEPSVGFGRQSRCAPAVSING
                     GSPIGGWLVDDLPVSEVEAVEIYRPGWSQLPIEYSHYPRASRCGLVVIWQR"
     gene            complement(323..1210)
                     /gene="rsgA"
                     /locus_tag="VGA78_18010"
     CDS             complement(323..1210)
                     /gene="rsgA"
                     /locus_tag="VGA78_18010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEX9895833.1"
                     /translation="MRGTVLAREGSRFQVLTPSGEVTAVLRGRVKRYEDRALVGDQVI
                     LEASASGWAIAQVDPRRNVLARREPGRQRERALAANLDQVFVMAATRDPEPVPQLVDR
                     LLVMAEADDIPAAVIVNKVDLDPGSALVDRMKLAGYEVFPVCVKRGLGLEPLFARMHT
                     GVSLLTGASGVGKSSLLNALQPGLALRTAAVSERIGRGRNTTVTARMIAIEGGGCLVD
                     TPGLSDVGLWGLDPRELVQCFPDLRRSVGQCRFADCRHISEPGCAVRAAAGVVVPGDR
                     YTSYLAFQEELASLPPDWA"
     gene            complement(1210..1497)
                     /locus_tag="VGA78_18015"
     CDS             complement(1210..1497)
                     /locus_tag="VGA78_18015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895834.1"
                     /translation="MQKHDRAAAFGGRDGQPYSVGIWVDDVPDSRGRYGAAILFIQWS
                     KGGDRPVGHVETDYLAWGATPAEAEERLKAISLFDVKAALDQAIAERPPEW"
     gene            complement(1599..2921)
                     /locus_tag="VGA78_18020"
     CDS             complement(1599..2921)
                     /locus_tag="VGA78_18020"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX9895835.1"
                     /translation="MTAPVDRRVLGFALLAGLPAVIVALAVILRSTLPAPVRIVLVVG
                     IGGTWLASAFAARASVINPLHTLANLLAGVRQGDFTLRARGADAQDPMGAVWLEFNTL
                     GDGLQQQRLGALEATALLRRIMEEIDVAIFAFDGDARLQLVNRAGERLLGEPAERLIG
                     HTGNHLGLDEARRLPPGRTLDATFPGGSGRWEVRRSTFRQGGRPLEMIVLADLTRALR
                     QEERLAWQRLVRVLSHEINNSLAPIQSLAGTLTGLLDRSPRPPDAEADLRRGLEVIGA
                     RSESLNRVMASYARLARLPAPVPREVNVGEWVHRVVALVASAQVSTVPGPEITLSGDG
                     DQLDQLLINLVKNAVEAVGERGAVEIGWRLLDPHTVELWVRDDGPGVAATANLFVPFF
                     TTKPGGTGIGLALSRQITEAHGGSIALTNRGDAPGALARVRLPLQRLS"
     gene            complement(2928..4286)
                     /locus_tag="VGA78_18025"
     CDS             complement(2928..4286)
                     /locus_tag="VGA78_18025"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX9895836.1"
                     /translation="MPDSPLVLVADDQPDVLEALRLLLKAEGYRAVTAHVPEGVIALV
                     EQYRPDAALIDLNYTRDTTSGREGLDLLSRIRALDPTLPVIVMTAWGSIDKAVEAMRL
                     GARDFVEKPWDNARLLTTLRNQVEWARAIRTGERLARENEMLRRDQLPVLIAEAPAMR
                     SVLALMERIAPSDANVLITGEHGTGKEVVARWLHAASGRKDRPLVIVNAGGLAEGVFE
                     SELFGHVRGAFTDAKVDRVGRFELADGGTLFLDEIANLSLPQQARILRVLQTGELERV
                     GDSRTRKVNVRVLAATNADLTAEVAAGRFREDLLFRLNTIEIDLPPLRERREDIAPLA
                     QYFLARYAAKYRSPARGFTASALAALESYPWPGNVRELDHCVERATLMVRGIEVEVQD
                     LVLPRPGAAAASERHRKLDDIERDAIRAALAEHGGNVLQAAKALGVSRSALYRRIERY
                     GL"
     gene            complement(4392..6818)
                     /locus_tag="VGA78_18030"
     CDS             complement(4392..6818)
                     /locus_tag="VGA78_18030"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895837.1"
                     /translation="MFADLRFAFRSLLRSPGFTLAALLTLALGIGANAAVVAVVNAVL
                     LRPLPYPVADRLVAITEYPRLRKSVLAEGVDVVSLPNLRDWQQRQRSFERLVGYSYGL
                     FSLTEAGDPEALLGASVSWDFFEATGTPPRLGRTFRPEEDVPSPPRVVVISDRLWRER
                     MDASPNAIGQSLQIDGRPYTVIGVMGPTYEFPAALPSGVTIDVRTAELWVPLQGQVLN
                     IARDNRNFMALGLLRQRVDLASAQDDMDRIARELEAEYPRENSGQSIAITLLKDRHVA
                     HARPALLVLLAAIACVLLVACVNVANLILARGRGRAREIAVRVALGASPRRLVRQMGV
                     EYLVLSGLGGLVGLLVAWASLQGLLWLRPENLPRAAAIRLDAWTVLATVGLTLLTAVL
                     VGLLPALRLARAGSLGIDGSRSGGLGPASTRMRQILTVSQVAVSLMLLVGAGLLLKSF
                     VRLTQARLGFEPNGVMTVGTLLPSSRYPTPQTWPPFFHRVLARLQSDPAIDAVAAVNV
                     LPLSGFGESSSLQIEGRAPFPEGETPETNMRYASAGYFEIMGIPVIAGRTFTASDDSA
                     GAPVVLVSQSLARQFFGGNALGEALRVYGVPRRIVGVVADVRENGPTRDAPLTVYAPF
                     PQIGSPVGFFVARSRLDQGTTAARIREAVLAVDNQQPVVNIRSMQSYVDSVLGQRRFT
                     AALMAVFAIVALTLAIVGLYGVIAYMVSQRTREIGIRMALGATTTGVTGLVMRQGIGL
                     ALTGVVIGLVLAAALSRMLGQLLYGVSSLDPLVYSGVALLLVVVAATASFLPARRAAA
                     VDPVTALKTE"
     gene            complement(6852..9257)
                     /locus_tag="VGA78_18035"
     CDS             complement(6852..9257)
                     /locus_tag="VGA78_18035"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX9895838.1"
                     /translation="MSLYQDVRFAFRGLTRSPGLAAVIVLSLALAIGANTTVFTWMQG
                     FVLRPYPLVKQPDQLFYVNTRAPDGDDWSVSYPTLKDWDRGSHTTTGIAGFDMTQVNL
                     RVDEESGRAWGLMATGNYFQLLGLEPVVGRLFSPADEEAAAPVVVLGHQFWLRRFGGD
                     RSVIGKPVTLNGHGFTIIGVLPPRFGGMSVGLVFDVFVPFTLQPLLTPGNQVVDRGWQ
                     SMEAFARRKPGVSLAQARADLEIVAQEVSRVHNREEGILLSQMRERGAARVLLPVLGA
                     LLGITILVLLIACANIANVLLARAGGRSKEIGVRLALGAQRARIVRQLLTESALLAGA
                     GCALGLLLAWWGRNGLMAFVPPAPFPIDVDLQIDGRVVLFALAVTGLTTVLFGLAPAL
                     RASRPDLVPVLKDEVSGIGVSRSLLRSSLVVTQVALSLVALVSAGLFLRALQRAQQVD
                     IGVADPDRLLVVSTNPYLAGYSRETGPAMAEQLLERVRRVPGVTYASLSSFAPLGFGG
                     NSSQSISVEGYTPARDENMSVNYGNVSDQYFEALGLPLLQGRSLAAPDRRESQPVVVV
                     NQAFVDRFFQGRDPLGKRVYRGDTAVVVGVVPTGKYLQLTESPRPLIWRPLAQNWSSR
                     LELFVRTTGDPKGLVETLRQELASFDAELPFLDPRTMTEQTLPATIGQRIGARMLGLF
                     GGLALVLSALGIYGVMAYTVSLRTREMGIRMALGAAREQMVRLVLVHSAKLALLGLGI
                     GALLAFGAGTLLQSLLLGVPAGDPLTYVSIGILLLGVALAASAIPAIRAARIDPVRAL
                     RAE"
     gene            complement(9339..10025)
                     /locus_tag="VGA78_18040"
     CDS             complement(9339..10025)
                     /locus_tag="VGA78_18040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895839.1"
                     /translation="MTLEGITKVYYTDELETHALSDVHLQIAQGEFVAVSGPSGCGKT
                     TMLSLLGLLDTPTSGTYTLAGQPVAGLNAAERARVRNRQIGFIFQAFNLIGDLTVYEN
                     VELPLTYRGMPSAERQKRVQAALERVEMAHRMKHYPSQLSGGQQQRVAVARAVAGDPA
                     ILLADEPTGNLDSHNGEQVMDLLRELHRGGATICMVTHDPRYARYADREVRLFDGRVV
                     SEGAAAAATA"
BASE COUNT         1694 a         3488 c         3390 g         1454 t
ORIGIN      
        1 cagtatctcc cgttcgcgcc gctggcgcat tggcagcaga atttctggga ttaccggaac
       61 gatttcgctt ttgagccatc ggtgggtttc ggccggcagt cgcgctgcgc tccggcggtt
      121 tcgatcaatg gcggatcacc gatcgggggc tggctggtcg acgaccttcc ggtatccgag
      181 gtcgaagcgg tcgagatcta ccggccgggc tggagccaac tgccgatcga gtactcccac
      241 tatccccggg ccagccggtg cgggctggtg gtgatctggc agcgttaggt tgagacggta
      301 ctgccggcgg ggaagttccc cgtcaggccc agtcgggggg gagcgaggcc agctcttcct
      361 gaaacgcgag gtatgaggtg tagcggtcgc cgggaaccac cacgccggcg gccgcccgca
      421 ccgcgcagcc tggttccgag atgtggcgac agtcggcgaa gcggcactgg cccacggagc
      481 gccggaggtc gggaaagcac tggaccagct cacgcggatc gagcccccac agacccacat
      541 cgctcagtcc gggggtatcc accagacagc caccaccttc gatcgcgatc atccgcgccg
      601 ttacagtggt gttgcggccc cgtccgatcc tttcgctcac tgccgccgtc ctgagggcca
      661 gccccggctg cagggcgttc agcaggctcg actttcccac tccggatgct ccggtgagga
      721 gcgagacgcc ggtgtgcatc cgggcgaaca ggggttccag tcccagcccc cgctttacac
      781 aaactggaaa gacctcgtag ccggccagct tcatgcggtc taccagggcc gaaccggggt
      841 cgaggtcgac cttgttcacg atcaccgccg ccggaatgtc atcagcttcc gccatcacca
      901 gcaggcgatc gaccagttgc ggaaccggct cggggtctcg agtcgcggcc atcacgaaga
      961 cctggtcgag attggcggct agagcgcgtt cgcgctgccg gcccggttcg cggcgagcca
     1021 gcacattgcg ccgggggtcg acctgcgcga tggcccagcc ggaggccgag gcctcgagga
     1081 tcacctgatc gccaaccaga gcccggtcct cataccgctt gacccggccg cgcagtacgg
     1141 cggtcacttc tccgctcgga gtcagcacct ggaatcggga gccttcacgc gcgagtaccg
     1201 tcccccgcat taccactccg gggggcgctc ggcgatggcc tggtccagcg cggctttgac
     1261 atcgaagagc gagatcgcct tgagccgttc ctccgcctcc gccggggtag caccccaggc
     1321 caggtagtcg gtctcgacat ggcctaccgg ccggtcaccg cccttgctcc actggatgaa
     1381 gagaatcgcc gcgccatacc ggccgcggct gtcgggcacg tcgtccaccc agattccgac
     1441 cgagtagggc tgtccgtcgc gaccaccaaa tgccgcggcg cggtcgtgtt tctgcatgta
     1501 gccgccgagg gtgatctcgg ggtcaatcgc tcgaatgggg cctccacgaa gcgcgctcgt
     1561 gactgaatct agcgcctccg ccagccccgc ccgatcgctc aggagagccg ctgcagcggg
     1621 agacgcaccc gggccagcgc gccgggcgcg tccccccggt tggtcagggc aatcgacccg
     1681 ccatgcgctt cggtgatctg acgcgacagc gccagtccga tgccggtgcc accaggcttg
     1741 gtggtgaaga agggaacgaa caggttggcg gtagccgcga cccccgggcc gtcgtcccgg
     1801 acccagagct cgaccgtatg gggatcgagc agccgccagc cgatctccac tgctccccgc
     1861 tcgcccaccg cctccacggc gttcttgacc aggttgatga gcagctggtc caactgatcg
     1921 ccgtcgccgc tcaacgtgat ttcgggaccg ggcacggtgc tgacctgggc gctcgcaacc
     1981 agcgccacca cccggtgaac ccactcgccg acgttcacct cgcgcggaac cggcgccggc
     2041 agccgagcca gccgcgcata cgacgccatc acccgattga gtgattccga ccgggctcca
     2101 atgacctcga ggccccgccg cagatcggcc tcggcatccg gcggacgggg ggaacgatcc
     2161 agcagacccg tcagggtccc ggccagcgat tggatgggcg ccagggagtt gttgatctcg
     2221 tgactgagca cccgcaccag ccgctgccag gcgaggcgtt cctcctggcg gagggcgcgg
     2281 gtgagatcgg ccagcacgat catctccagg ggacggccgc cctgccggaa ggtgctgcgg
     2341 cgtacctccc accgtcccga gccaccgggg aaggtggcat ccagggtgcg tcccggcggc
     2401 aagcggcgcg cctcatccag gccgagatgg tttccggtat gcccgatcag gcgctcggcc
     2461 ggctctccca gcagtcgttc accggcccgg ttgaccagct ggagccgggc gtccccgtcg
     2521 aacgcgaaaa tggcgacgtc aatctcttcc atgatccggc gcagcagtgc cgtggcctcg
     2581 agcgctccca gacgctgctg ctgcaacccg tcgcccaggg tgttgaactc gagccagacc
     2641 gcgcccatcg gatcctgggc gtcggccccc cgggcccgca gggtgaaatc gccctgacgc
     2701 acgccggcca gcagattggc cagggtgtgg agcgggttga tgacgctggc ccgggcggcg
     2761 aaggcgctgg ccagccaggt accgccgatc ccgaccacca gcacgatccg gaccggggcc
     2821 ggcagggtgg agcggaggat gacggccagg gcgacgatga cggcgggcag cccggccagc
     2881 agcgcgaatc ccagcactcg tcggtcgacc ggcgcggtca cgacccctca gagtccgtag
     2941 cgttcgatgc gccggtagag cgcactgcgg gagacgccta acgccttggc cgcctgcagc
     3001 acgttgccgc cgtgctccgc cagcgccgcc cggatggcgt cccgctcgat atcgtccagc
     3061 ttgcgatgtc gctcggatgc cgcggcggcg ccgggccggg gcagcaccag gtcctgcacc
     3121 tcgacctcga tgcctcgcac catgagcgtg gcgcgttcca cgcagtgatc cagctcccgc
     3181 acattgccgg gccaggggta ggactccagc gccgccaggg ccgaggccgt gaagcctcgg
     3241 gccggcgagc ggtacttggc ggcatagcgc gcgaggaaat actgcgccag gggggcgatg
     3301 tcctcccgtc gttcccggag cggcggcaga tcgatctcga tggtgttcag ccggaacagc
     3361 agatcttccc ggaaccggcc ggccgccact tcggcggtca gatcggcgtt ggtggcggcc
     3421 aatacccgga cgttcacctt gcgggtccgg gagtcgccca cccgctccag ctcgccggtc
     3481 tgaagcaccc ggagaatgcg cgcctgctgc ggcaggctca ggttggcgat ctcgtccagg
     3541 aacagcgtcc cgccatcggc cagctcgaag cgacccaccc ggtccacctt ggcatcggtg
     3601 aacgcgcccc gcacgtggcc gaagagctcg ctctcgaaca ccccttcggc caggccgccg
     3661 gcgttgacga tgaccagcgg ccggtccttc cggcccgagg cagcgtggag ccagcgcgcg
     3721 accacttcct tcccggtgcc gtgctcgccg gtaatgagca cgttggcgtc ggagggcgcg
     3781 atccgctcca tcagcgccag caccgagcgc atcgcggggg cctcggcgat cagcaccggc
     3841 agctggtcgc gccgcagcat ctcgttttcg cgggccagcc gttcgccggt ccggatggcc
     3901 cgggcccact ccacctggtt gcggagcgtg gtcagcagcc gggcgttgtc ccagggtttc
     3961 tcgacgaaat cgcgggcacc cagccgcatg gcctcgaccg ccttgtcgat gctcccccat
     4021 gcggtcatca cgatgaccgg caaggtggga tcgagggccc ggatgcggga gagcagatcc
     4081 aggccttcgc ggccggaggt ggtgtcgcgg gtgtagttga gatcgatcag ggcggcgtcg
     4141 ggccgatact gctccaccag agcgatgacc ccctcgggca cgtgcgcggt gacggcccga
     4201 tacccttcgg ccttgagcag cagccgcagg gcctccagaa cgtcgggctg gtcatcggcg
     4261 acgaggacca ggggtgaatc gggcatcttt tcaacttagt cgaaggcagt cgaaggcggt
     4321 cgaaggcgtc gaaggccgtc gacggaggta accggcttcg accctcttcg accgtcttcg
     4381 actgtcttcg actattcggt tttgagtgcc gtcaccggat cgaccgccgc cgctcggcgg
     4441 gctgggagga aggacgcggt ggccgcgacc accaccagca gcagggcaac gccgctgtag
     4501 accagcggat cgaggctgct caccccgtag agcagctgcc ccaacatccg gctgagggca
     4561 gcagccagca ccagtccgat cacgacgccc gtcagcgcca gcccgatgcc ctgtcgcatc
     4621 accaggccgg tgactccagt ggtggtagcg cccaacgcca tccggatgcc gatctcgcgg
     4681 gtgcgctggc tcaccatgta cgcgatgacg ccgtacaggc ccacgatcgc cagggtgaga
     4741 gcgacgatgg caaagaccgc catcaaggca gcggtaaagc ggcgttggcc caggacactg
     4801 tccacgtagc tctgcatcga acggatgttg acgacgggct gctgattgtc gaccgccagg
     4861 acggcttcgc ggatccgggc ggcggtggtg ccctggtcca gtcggctccg cgccacgaag
     4921 aagcccaccg gcgacccgat ctgggggaac ggcgcgtaga ccgtcagcgg ggcatcccgg
     4981 gtcgggccgt tctcccgcac atcggccacg acgcctacga tgcgccgcgg gaccccatac
     5041 acgcgaaggg cctcgccgag ggcgttgcct ccgaagaact ggcgggccag cgactgggac
     5101 accagcacca ccggtgcgcc ggccgagtca tccgaggcag tgaaggtccg gcccgcgatg
     5161 accgggattc ccatgatctc gaagtagccg gccgaggcat accgcatgtt ggtttcgggg
     5221 gtctcgccct cggggaacgg agcccggccc tcgatctgga gcgaggaact ctcgccgaac
     5281 ccgctgaggg ggagcacgtt gaccgcggcg acggcgtcga tcgccggatc gctctgcagc
     5341 cgggccagca cccgatggaa gaacggtggc caggtttggg gcgtggggta gcgggagctc
     5401 ggcagcaagg tgcccaccgt cattacaccg ttaggctcga aacccagccg ggcctgggtc
     5461 agccggacga agctcttgag cagcaatccc gcccccacca gcagcatcag cgacacggcg
     5521 acctggctca cggtcaggat ctggcgcatt cgggtactgg cgggcccgag acctccactg
     5581 cgcgacccat cgatcccgag gctcccggcg cgggccagcc ggagcgccgg gagcaatcct
     5641 accagcacgg cggtgagcag ggtcaacccg accgtggcca ggacggtcca ggcatcgagc
     5701 cgaatggcgg cggcgcgggg caggttctcg ggccggagcc agagcaaccc ctggaggctg
     5761 gcccaggcca ccaagagacc caccaggcca cccaaccccg acagcaccag atattccacg
     5821 cccatttgcc ggaccaggcg gcggggtgag gcacccagcg ccacgcggac ggcgatctcg
     5881 cgggcccgcc cgcggccccg ggccagaatc aggttggcca cgttgacaca tgccaccagc
     5941 aggacgcagg cgatggcggc gagcaatacc agcagcgccg gccgggcgtg ggcgacatgc
     6001 cggtccttga gcagggtgat cgcgatgctc tgccccgagt tctccctggg gtactcggcc
     6061 tccagttccc gcgcgatgcg gtccatgtcg tcctgcgcgc tggccaggtc cacccgttgg
     6121 cgcagcagtc ccagcgccat gaagttgcga ttgtcgcgcg cgatattgag cacctgaccc
     6181 tggagcggaa cccagagctc ggccgtccgc acgtcgatcg tgacgccaga cggtagggcc
     6241 gcgggaaact cataggtcgg tcccatcacc ccgatgacgg tgtagggccg gccgtcgatc
     6301 tgcagactct ggccaatggc attgggcgag gcgtccatgc gctcccgcca cagccggtcg
     6361 ctgatgacca cgacccgggg cggggagggc acgtcttcct cgggccggaa ggtccgtccc
     6421 agccggggcg gggtgccggt cgcctcgaag aaatcccaac tcacgctggc gcctaacagc
     6481 gcttcgggat cgcccgcctc ggtcaggctg aagaggccat agctgtaccc caccagccgc
     6541 tcgaagctgc gctgccgttg ctgccagtcc cgcagattcg gcaacgagac gacgtccacg
     6601 ccttccgcca gcaccgattt ccggagccgg ggatactcag tgatcgccac caggcggtca
     6661 gccaccggat acggcaaggg ccggagcagg acggcgttca ccaccgccac caccgccgcg
     6721 ttggcgccga tcccgagcgc gagggtcagc agcgcggcaa gggtgaagcc gggagaccgc
     6781 agcaggctgc ggaaggcaaa gcgaagatcg gcgaacatga ggcccctgac gggatgacgt
     6841 ccggtgctag gtcattcggc gcggagagct cgtaccgggt cgatcctcgc cgcccggatg
     6901 gcggggatgg cgctcgcggc caatgcgaca cccaacagca agatgccgat gctgacgtag
     6961 gtgagcggat caccggccgg cacgcccagc agcagactct ggagcaacgt gccggctccg
     7021 aacgccagta acgcaccgat gccgaggccc agcagggcga gcttcgcgct gtggaccagc
     7081 accagccgca ccatctgttc ccgggcggcc ccgagggcca tgcggatccc catctcgcgg
     7141 gtgcggaggc tcacggtgta ggccatcacg ccgtagatgc cgagggccga cagaaccagg
     7201 gccagaccac cgaacaatcc cagcattcgc gccccgatcc gctgcccgat ggtggcgggc
     7261 agggtctgtt cggtcatggt gcggggatcg aggaacggca gttccgcgtc gaacgatgcc
     7321 agctcttgcc gcaaggtctc gaccagcccc ttggggtcgc cggtggtgcg cacgaacagc
     7381 tcgagccggg aactccagtt ctgagccagc ggccgccaga tcaagggccg gggcgactcg
     7441 gtgagctgca ggtacttgcc ggtgggcacg acgccgacca ccacggcggt gtctccccga
     7501 tacacccgct tgcccagcgg atcccggccc tggaaaaacc gatcgacaaa ggcctggttc
     7561 accaccacca ccggctggct ttcgcgccgg tccggcgccg ccaggctccg tccctgcagc
     7621 agcggcagac ccaacgcttc gaagtactga tccgagacgt tgccgtagtt caccgacatg
     7681 ttctcgtcgc gggccggggt atagccctcc accgagatgc tctgcgagct gtttccgccg
     7741 aagccgagcg gcgcgaagga ggacagggac gcgtaggtga cgccgggaac gcggcgcact
     7801 cgttccagca gctgttcggc catcgccggc ccggtctccc gcgaatagcc ggcgaggtac
     7861 gggttggtcg acaccaccag gagacggtcc gggtcggcca ccccgatgtc gacctgctga
     7921 gcccgttgca acgcccgcaa gaacaagccg gcggagacca gcgcgaccag cgacagcgct
     7981 acctgggtga cgaccaggct gctgcggagc agcgagcgcg acaccccgat cccgctgact
     8041 tcgtccttga gcaccggcac caggtcggga cgcgacgcgc gcagggccgg ggccagaccg
     8101 aacaacaccg tcgtgagccc ggtgaccgcc agcgcgaaga gcaccacccg gccatcgatc
     8161 tgcagatcaa cgtcgatcgg gaatggcgcg ggcgggacga aggccatgag gccgttgcgg
     8221 ccccaccacg ccagcagcag gccgagggcg cagccggccc cggcgaggag cgcgctttcg
     8281 gtgagcagct gccggacgat ccgggctcgc tgggccccga gcgccagcct gacaccgatc
     8341 tccttgctgc gtcctccggc gcgggccagc agcacattgg cgatgttggc gcaggcgatc
     8401 aacagcacca ggatggtgat tcccagcagg gccccgagca ccggaagcag tacccgcgcg
     8461 gctccccgct cgcgcatctg gctcagcaga atcccctctt cccggttgtg gacccgggag
     8521 acctcctggg ctacgatctc cagatcggcg cgcgcctggg ccagagacac ccccggttta
     8581 cgccgggcga acgcctccat cgactgccag ccccgatcca ccacctgatt cccgggcgtg
     8641 agcagcggct ggagggtgaa cggcacgaag acgtcgaaca ccaggcccac gctcatcccg
     8701 ccgaaacgag gcggcagcac cccgatgatg gtgaagccgt gaccgttgag cgtcaccggc
     8761 ttgccgatga cagagcgatc cccgccgaag cgccgcagcc agaactggtg ccccagcacc
     8821 accaccgggg ccgccgcctc ttcgtcggcg gggctgaaga gccggcccac gaccggctcg
     8881 agtccgagga gctggaagta gttcccggtg gccatcagcc cccaggcccg gcccgactcc
     8941 tcatccactc gaagattcac ctgggtcatg tcgaagccgg cgatgccggt ggtggtgtgc
     9001 gagccccgat cccagtcttt gagggtgggg tagctcaccg accagtcgtc accatcgggc
     9061 gcccgggtgt tgacgtagaa gagttggtcg ggctgcttca ccagcgggta gggccgcagc
     9121 acgaagccct gcatccaggt gaagacggtc gtgttggcgc cgatggcgag cgccagcgac
     9181 aggacgatga ccgcggccaa cccgggtgaa cgggtcaggc cgcggaacgc gaaccgtaca
     9241 tcctggtaaa gggacacgtt gagccctcag tgctaaggac tcagggctaa ggactaagta
     9301 gtacccgaaa gaccccgctt aggccttagt ccttagtcct atgctgtggc cgctgccgcg
     9361 gcgccttccg agactacccg cccgtcgaac agccgcactt cgcggtcggc gtagcgggcg
     9421 tagcgtggat cgtgggtcac catgcagatg gtggcgccgc cccgatgcag ctcacgcaac
     9481 aggtccatca cctgctcgcc gttgtgggaa tccaggtttc cggtgggctc gtcggccagg
     9541 aggatggcgg gatcgccggc caccgcgcgg gccaccgcca cacgctgctg ctggcccccc
     9601 gacaactggg aggggtaatg cttcatccgg tgggccatct ccacccgctc cagcgccgcc
     9661 tggacccgct tctggcgttc cgccgagggc ataccgcggt aggtgagagg cagctccaca
     9721 ttctcgtaca ccgtgaggtc gccgatcaga ttgaaggcct ggaagatgaa tccgatctgc
     9781 cggttgcgaa cccgggcccg ctccgcggcg ttgaggcccg ccaccggttg ccccgccagg
     9841 gtgtaggtcc ccgaagtcgg cgtatccagc agtcccagca gcgagagcat cgtggtcttg
     9901 ccgcagccgg acggccccga caccgccacg aactcgcctt gcgcgatctg caggtggacg
     9961 tcggagagcg cgtgggtctc gagctcgtcg gtgtagtaga ccttggtaat gccttccagt
    10021 gtgatc
//
LOCUS       DASWKS010000634         3013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_338099, whole genome shotgun sequence.
ACCESSION   DASWKS010000634 DASWKS010000000
VERSION     DASWKS010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338099"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..889
                     /locus_tag="VGA78_18045"
     CDS             <1..889
                     /locus_tag="VGA78_18045"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9895840.1"
                     /translation="VSVARPKRRSVRPAQIARAVDEGRESLDLYLDEISRVPLLTRDE
                     EMELARKAFRGSVVAQEKLARHNVRFVVSVAKKFQNRGVPLVDLIGEGNLGLMTAARK
                     FDPDRGVKFISYAVWWIRQAVQAAIARHGRPVRVPLNRTADLSRLGRTTTLLKERLGR
                     MPTTEELARATGLTVEAVRSLSALNSEAVRLDHPTRDGDGNERIERFATEQETTDSIT
                     MANSQTADIEAALAVLPARDAKVLKLYFGLEDGNSRTLEEIGRMMGVTRERIRQLRDR
                     ALLRLREGETGDRLRDLVA"
     gene            complement(1046..>3013)
                     /gene="acnA"
                     /locus_tag="VGA78_18050"
     CDS             complement(1046..>3013)
                     /gene="acnA"
                     /locus_tag="VGA78_18050"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF006757.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEX9895841.1"
                     /translation="TDLVLTVTEMLRKRGVVGKFVEFCGPGLSNLSLADRATIANMSP
                     EYGATVGFFPVDEETLTYLRRTGRLPEAERVERYCKENQLFHTVDAPDPDFSTVLVLD
                     LGTVVPSLAGPKRPQDLVALSALKGNFLSSVPALLPTTASQERHETAQSTYSRWIGEG
                     GSYGTMATPTGVPCSINGANFDLHDGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVER
                     GLQTKSWVKSSLAPGSRVVSEYLTNSGLQTYLDQLGFQVVGFGCTTCIGNSGPLPDPI
                     AQAIDEHHLVTVAVLSGNRNFEARIHPLVRANYLASPILVVAFALAGRVDLDLEREPL
                     GTDTAGKPVYLKEIWPSAEEIREAMSASLKPELFTQQYALVFDGDEQWRGLLVAEGSR
                     FAWDSSSTYIQEPPFFVDLPRRPGGVSDVRGARVLVSLGDSVTTDHISPAGSIPRNGP
                     AARFLLGHGVEQVDWNTFGARRGNHQVMIRGTFGNVRIRNRLVPDREGNWTVHLPTGE
                     IQSIYDVATRYIASKTPLIVLAGKEYGTGSSRDWAAKGTALLGVRAVIAESYERIHRS
                     NLVGMGVLPLAFKRGESRDGLGLTGREIYDITGITQDMQPGQTVVVTATAEDGKVTRF
                     DAIVRLNSHVELEYYHHGGILPRVLRMFLGS"
BASE COUNT          511 a         1001 c          979 g          522 t
ORIGIN      
        1 tgtgagtgtt gcccgcccca agcggcgctc tgttcgaccg gctcagatcg ctcgcgccgt
       61 agacgaaggc cgtgaaagcc tcgatctcta cctcgacgag atcagccgcg ttccgcttct
      121 gacccgggac gaggagatgg agcttgcccg gaaggcgttc cggggcagcg tggtcgccca
      181 ggaaaagctg gcgcggcaca acgtgcgctt cgtcgtctcg gtggccaaga agttccagaa
      241 ccgcggggtg cccctggtcg acttgatcgg cgagggcaat ctcggcctca tgacggcggc
      301 ccggaaattc gatcccgacc ggggcgtcaa gttcatctcg tacgcggtgt ggtggatccg
      361 gcaggcggtt caggccgcta tcgcccggca cggccgcccg gtgcgggtcc cgctcaatcg
      421 aacggcagac ctctcccggc tggggcggac tacgaccctc ctcaaggagc ggctgggccg
      481 gatgcccacc acggaagagc tggcccgcgc taccggcctc accgtggaag cggtccgctc
      541 cctgtccgcc ctcaattccg aggcggttcg gctcgatcac cccacccgcg atggtgacgg
      601 caacgagcgg atcgagcggt tcgcgaccga gcaggagacc actgacagca tcaccatggc
      661 caacagccag acggcggaca tcgaggccgc gctggcggtg ctgccggccc gcgatgccaa
      721 ggtgctcaag ctctacttcg gtttggagga tggcaacagc cgcactctcg aggagatcgg
      781 ccgaatgatg ggcgtcaccc gggagcggat tcgccagctg cgcgatcgtg ccctgctgcg
      841 cctgcgggaa ggcgaaaccg gcgatcgcct gcgggatctg gtggcgtaac taaccactgg
      901 tcgaaggggt cgaaggtggt cgaaggagtc gaagtggttt acaacgatgc ggccgggctg
      961 ttcgcccggc cgctttcttt ctgattggcc ctcttcgacg cccttcgacc tgcttcgacc
     1021 ccttcgacct gcttccaccg gcagctcagc tgccaaggaa catccggagc acccggggca
     1081 gaatcccacc atggtggtag tactccaact ccacgtggct gttcagacga acgatggcgt
     1141 cgaatcgggt caccttgccg tcctccgccg tggcagtcac gaccaccgtc tggcccggct
     1201 gcatgtcctg ggtgatgccg gtgatgtcat agatctcgcg gccggtcagc cccaagccat
     1261 cgcggctttc cccccgcttg aatgccaggg gcagcacccc catgccgacc aggttgctgc
     1321 ggtgaatccg ctcgtagctt tccgcgatga ccgctcggac gcccagcaac gccgtcccct
     1381 tggcggccca gtcccggctc gagccggttc catattcctt gccggctagc acgatcagcg
     1441 gggtcttgct ggcgatgtag cgggtcgcca cgtcgtagat cgattggatc tcgccggtgg
     1501 gaaggtgcac cgtccagttg ccttcccggt ccggtaccag gcggttcctg atgcgaacgt
     1561 tcccgaaggt ccctcgtatc atgacctggt ggtttccccg gcgggcaccg aaggtgttcc
     1621 agtcgacctg ctctaccccg tgccccagca gaaaccgagc cgccggcccg ttgcgcggga
     1681 tgctgccagc cggcgaaatg tggtcggtgg tcaccgagtc gcccagcgac accagaaccc
     1741 gggcgccccg aacgtcgctc accccgccag gccggcgggg caagtcgaca aagaaggggg
     1801 gctcctggat gtaggtggag ctgctgtccc aggcgaaacg acttccctcc gccaccagga
     1861 gtccccgcca ctgctcatct ccgtcgaaga ccagagcata ctgctgggtg aacagctccg
     1921 gcttgagtga agccgacatg gcctcgcgaa tctcttcggc gctgggccag atctccttca
     1981 ggtacaccgg cttccccgcg gtgtcggtgc ccagcggctc ccgctccagg tcgagatcca
     2041 cccggccggc cagggcgaag gcgaccacga gaatgggcga tgccaggtag ttggcccgaa
     2101 ccagagggtg aatccgggct tcgaagttcc ggttgccgga gagcacggcc accgtcacca
     2161 ggtgatgttc gtcgatggcc tgggcaatcg ggtccggcag cgggccggaa ttgccgatgc
     2221 aggtggtgca gccgaacccg accacctgaa acccgagctg gtcgagatag gtctgcaatc
     2281 ccgaattcgt caggtattcc gataccaccc gcgacccggg cgccagactg gacttgaccc
     2341 aggacttggt ctgcagtccc cgctcgaccg ccttcttggc cagcaatccg gcgcccagca
     2401 tcacggaagg gttggaggtg ttggtgcagc tggtaatcgc cgcgatgacc acgctgccgt
     2461 catggaggtc gaagttcgcc ccgttgatgg agcagggaac ccccgtcggc gtcgccatgg
     2521 tgccgtagga accgccttca ccgatccacc ggctgtaggt gctctgcgcg gtttcgtggc
     2581 gctcctggga agccgtcgtg ggcagcaggg cgggaacgct cgacaggaag tttcccttga
     2641 gggccgagag tgccaccagg tcctgcgggc gcttgggacc cgccagactc ggtaccaccg
     2701 tgcccagatc gagcaccagg acggtcgaga aatcgggatc gggagcgtcg acggtgtgaa
     2761 agagctggtt ctccttgcag taccgttcga cccgttcggc ttcgggcagg cggccggtgc
     2821 gtcgcaggta ggtcagagtc tcctcatcga ccgggaagaa gcccaccgta gccccgtact
     2881 ccggcgacat attggcgatc gtcgcgcggt cggccagact gaggttactc aaacccgggc
     2941 cgcagaattc gacgaacttc cccacgacgc cgcgcttcct cagcatctct gtcaccgtta
     3001 gcaccaggtc ggt
//
LOCUS       DASWKS010000635         5936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1105392, whole genome shotgun sequence.
ACCESSION   DASWKS010000635 DASWKS010000000
VERSION     DASWKS010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1105392"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VGA78_18055"
     CDS             <1..533
                     /locus_tag="VGA78_18055"
                     /inference="COORDINATES: protein motif:HMM:NF026064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895842.1"
                     /translation="DLRVATQAWEQGAALIIAVNKWDLIPEKDSNTASRGQVSLIEKA
                     PFLQYVPFLYVSALTGQRVHRLFDLILEVADARQARIKTSEVNRVMGDLVERQMPPQK
                     PGEEVKLLYASQIGTAPPTFAIVSNRPDDVPESYQRYIMHGFRSAWPFPGSPVRLRFT
                     SRGAGSHARTSGDGRR"
     gene            533..1147
                     /gene="plsY"
                     /locus_tag="VGA78_18060"
     CDS             533..1147
                     /gene="plsY"
                     /locus_tag="VGA78_18060"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX9895843.1"
                     /translation="MLAAWFIASYLLGSIPTSWLVVRLVKGQDLRSLGSGNLGATNLY
                     RQLGWKWAIPAALIDVAKGAVPVLVFGPRAGGDTLVPTLLGVTAVIGHVFSVFVNFKG
                     GKGVATGAGVVLALAPWAVLAALAVWALVVRITGYVSLGSVVAAASLPVAVWLLHPDR
                     RDVVWIFALLSLLIVVLHRANLKRLLAGTEHRFGRRSSGEATAP"
     gene            1144..2142
                     /locus_tag="VGA78_18065"
     CDS             1144..2142
                     /locus_tag="VGA78_18065"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEX9895844.1"
                     /translation="MTAIAVLGGGAWGTALADHLARKGETVSLWARDPDVVAEITRQR
                     RNQTHLPGHQLAESLTVTTSAETAVKGCSVIVNATPSHAVRAVLAGLAGCIAADALVV
                     NASKGIERESLTFMSGVVRDTLPGRRYVVLSGPSFADEVAAGQPTAVVAASLDPESSL
                     RTQGLFSNSRFRVYTSVDVTGVEVGGALKNVIAIAAGVLDGMGLGHNPRAALITRGLA
                     EMSRLGVALGADQATFAGLAGLGDLVLTCTGSQSRNRSLGVALGQGGTLAQYIATHRA
                     AVEGVNAARAALELAKPVGVELPVTSQVGAVLFDEKPVGQAVADLMERALKSEQWT"
     gene            2139..2525
                     /locus_tag="VGA78_18070"
     CDS             2139..2525
                     /locus_tag="VGA78_18070"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX9895845.1"
                     /translation="MTGPGSLQEFFSIGEVCALTDLKPHVLRYWESQFRLLSPAKNRS
                     GNRVYRSREVELILLVKHLLYSEKYTIEGARLQLEAFRKNGELKKAARHAASGETIRE
                     LRAMVDRAIATLDGVAKKPADDASAD"
     gene            2557..3306
                     /gene="surE"
                     /locus_tag="VGA78_18075"
     CDS             2557..3306
                     /gene="surE"
                     /locus_tag="VGA78_18075"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX9895846.1"
                     /translation="MQILVSNDDGILAPGLAVLVEAAMQVGQVTVVAPDREQSGTSHS
                     LTLHRPLRPHRRHDGAFQIDGTPTDCVLLAVGALMPERPAFVFSGVNHGPNMGEDVLY
                     SGTVSVAMEAVALGIPGIAFSASTRDETVLKGYQEVVTGLVQRIVAVKDFPRDMVLNI
                     NLPGIPPHEVKGVKVTKLGSRYFSESLTRMQDPWGREVLWIGGGEITWTGDADSDHYA
                     VHDGYISVTPLHMDLTNYSIIEMVRSWSLEQ"
     gene            3288..3947
                     /locus_tag="VGA78_18080"
     CDS             3288..3947
                     /locus_tag="VGA78_18080"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX9895847.1"
                     /translation="MVARAVGQGDSYGGYRTRLVEQLQAKGIRNLAVLEAIATVPRHL
                     FVPESVRHRAYEDSALPIEAGQTISQPWVQARSLEVVGLTGKERVLEVGAGSGYQTAL
                     LAHLSTHVFAVERVAVLAYAAKKSLDLAGVTNATVLVGDGTLGWRSCAPFDAIVVAAA
                     SPGIPLPLLEQLTPGGRIVIPVGEGDQQVLKLVERQGETFRESIVADVRFVPLLGRHG
                     F"
     gene            4179..4829
                     /locus_tag="VGA78_18085"
     CDS             4179..4829
                     /locus_tag="VGA78_18085"
                     /inference="COORDINATES: protein motif:HMM:NF008102.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX9895848.1"
                     /translation="MELIGTLIDFILHIDQHLQEIIGQYGALTYLILFLIVFCETGLV
                     VMPLLPGDSLLFAAGTFAALGSLNLWLLILLLCTAAIAGDTVNYWIGRWIGPRAFSGR
                     LRWLRQDYLRRTEEFYLRHGGKTIVLARFIPIIRTFAPFVAGVGRMNYTRFITYNVAG
                     GILWVVLFTLGGYLFGNLPAVRENFSLVVLAIIGVSMLPLVTEWLKARKRARTPAA"
     gene            complement(5319..>5936)
                     /locus_tag="VGA78_18090"
     CDS             complement(5319..>5936)
                     /locus_tag="VGA78_18090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895849.1"
                     /translation="NLRGSVLRGTRFGKAVLRGVKGGAWDAVVTSGMVWDPRGTWLRA
                     PGWRQLREGYTGTRAMFHMVLLVAFMAPLILRTLYWLSINRFQTLLVPLADSTRVSGM
                     TPCLSETCQVTTIWRAVFGVDRGWTVWLPAGALVIYNLIRTYLTWQISPMREEEDLSG
                     VSPALSRYRHLLWLHWIFTILFVYAVVHAGQLILRNLFLPVWLPQ"
BASE COUNT          999 a         1931 c         1966 g         1040 t
ORIGIN      
        1 aggacctccg ggtggccacc caggcgtggg agcagggagc cgccctcatc atcgcggtca
       61 acaagtggga tctgattccg gagaaggatt ccaacaccgc cagccggggc caggtctcgc
      121 tgatcgagaa ggcgcccttc ctgcagtacg tgccgttcct ctatgtctcg gccttgacgg
      181 ggcaacgggt gcaccggctg ttcgatctga tcctggaagt ggccgacgcc cgccaggcac
      241 ggatcaagac ctcggaagtg aaccgggtga tgggcgatct ggtcgagcgc cagatgccgc
      301 cccagaagcc gggcgaggaa gtgaagctgc tctacgcttc ccagatcggc acggcgccac
      361 ccactttcgc gatcgtcagc aaccggccgg atgacgttcc cgagtcctac cagcgctata
      421 tcatgcacgg cttccggagc gcctggccgt tccccggctc gccggtgcgg ctccggttca
      481 ccagccgggg cgccggcagc catgcccgga ccagtgggga tggccggcgg tgatgctagc
      541 ggcctggttc atcgcctcgt acctgctggg gtcgattccc accagctggc tggtggtgag
      601 gctggtgaaa ggccaggacc ttcgcagcct ggggagcgga aacctcggcg ccaccaatct
      661 gtaccgtcag ttaggctgga aatgggccat cccggccgcg ctgatcgacg tggccaaggg
      721 cgcggttccg gtcctggtgt tcggccctcg cgccggcggc gacacactgg tcccgaccct
      781 gctcggcgtc accgccgtga tcgggcacgt cttctcggtc ttcgtgaact tcaagggcgg
      841 gaagggtgtc gcgaccggag ccggcgtagt gctggcgctc gcgccctggg cggtgctcgc
      901 ggcactcgcg gtctgggcgc tggtggtgcg gatcaccggg tacgtctccc tcggcagtgt
      961 cgtggccgcg gcctcgttgc cggtggcggt gtggctgctc catccggacc ggcgagacgt
     1021 ggtctggatc ttcgcgctcc tgtcactcct gatcgtggtg ctacaccggg ccaatctcaa
     1081 acgactgctg gcagggaccg aacaccgctt cggccgccgg tcgagtggcg aggccacggc
     1141 cccatgaccg cgatcgcggt gctgggcggt ggcgcgtggg gcaccgcgct ggcggatcac
     1201 ctcgcccgca agggtgaaac agtctccctg tgggcccgcg atcccgacgt ggtggccgaa
     1261 atcacccggc aacggcgaaa ccagacccat ctgcccggcc atcagttggc ggagtcgctc
     1321 acggtgacca cctccgccga gacggcggtg aaaggctgct ccgtcattgt gaacgccacg
     1381 cccagccacg cggtccgtgc ggtgctggcg ggcctggccg gttgcatcgc ggccgacgcg
     1441 ctggtggtga atgccagcaa agggatcgag cgcgagtcgc tcaccttcat gtcgggtgtg
     1501 gtgcgcgaca cgctgccggg caggcgctac gtggtgctct ccggccccag ctttgccgat
     1561 gaggtcgccg cggggcagcc gaccgcggta gtcgcggcct cgctcgaccc ggaatcgagc
     1621 ctccgcaccc agggcttgtt ctccaattcc aggttccggg tctacacctc ggtggacgtg
     1681 accggcgtgg aagtgggcgg ggcgctcaag aacgtgatcg cgatcgccgc cggggtcctc
     1741 gacgggatgg gcctgggaca caatccccgg gccgcgctga tcacccgcgg tctggccgaa
     1801 atgagccggc tgggagtcgc gctcggcgcc gaccaggcga ctttcgccgg gctggccggc
     1861 ctgggcgatc tggtcctcac ctgtaccggc tcacaaagcc gcaaccgatc cctgggggtg
     1921 gcgctgggcc agggcgggac actggcccaa tacatcgcga cccatcgcgc ggccgtggaa
     1981 ggcgtgaacg ccgcccgggc cgccctcgag ctcgcgaaac cggtgggcgt ggaattgccg
     2041 gtcaccagcc aggtcggggc cgtgttgttc gatgagaagc cggtcggcca ggcggtggcc
     2101 gacctgatgg aacgtgccct caagtcggag caatggacat gacgggaccg ggttcgttgc
     2161 aggagttctt ttccatcggc gaggtgtgcg ccctcaccga tctcaagcca cacgtcctgc
     2221 gctactggga gagtcagttc cgtctcctca gcccggccaa gaatcggtcg ggcaaccggg
     2281 tgtaccggag ccgcgaggtc gagctgatcc tgctggtcaa gcacctcctc tacagcgaga
     2341 agtacaccat cgagggcgcc cggctgcagc tggaggcctt ccggaaaaac ggggaactca
     2401 agaaagccgc tcgccacgcc gcctcgggtg agactatccg cgagctgcgc gccatggtcg
     2461 atcgcgccat cgcgaccctc gatggcgtcg ccaagaagcc cgcggacgac gcgtccgccg
     2521 actagcagct cgcgacccgc gactagattc ccccccatgc agatcctcgt ctccaacgac
     2581 gacggcatac tggcgcccgg tctggcagtg ctggtggagg cggccatgca ggtgggccag
     2641 gtgaccgtcg tggcgcccga ccgggagcag agcggcacgt cgcattcgct caccttgcac
     2701 cggccgctcc gaccccaccg ccgccacgac ggggcattcc agatcgacgg gacccccacc
     2761 gattgcgtcc tgctcgcggt cggggcgctg atgccggagc gccccgcttt cgtcttctcg
     2821 ggggtgaatc acgggcccaa catgggcgag gacgtgctct actcgggcac ggtctcggtg
     2881 gcgatggaag cggtggcgct gggaatcccc ggtatcgcgt tctccgcctc cacccgggac
     2941 gagacggtgc tcaagggata tcaggaggtc gtgaccggcc tggtccaacg tatcgttgcg
     3001 gtgaaggact tcccccgcga catggtgctg aacatcaatc tgcccggcat cccgccgcac
     3061 gaggtgaagg gagtgaaggt caccaagctc ggcagccgct acttctccga atcgctcacc
     3121 cggatgcagg atccctgggg ccgcgaggtc ctctggatcg gcggcggcga gattacctgg
     3181 acgggcgacg cggattccga ccactacgcg gtccacgacg gctacatctc ggtcacgccg
     3241 ctccacatgg atctcaccaa ctactccatc atcgagatgg tccggtcatg gtcgctcgag
     3301 cagtagggca gggggacagc tatggcggct accgcacccg gctggtggag cagctccagg
     3361 ccaagggcat ccgcaatctc gcggtgctgg aagcgatcgc caccgtgccg cgccatttgt
     3421 tcgtcccgga gagcgtgcgc caccgggcct acgaggactc ggccctcccc atcgaggcag
     3481 gacagaccat ctcccaaccg tgggtccagg cccgatcgct cgaggtggtg gggctgaccg
     3541 gcaaggaacg ggtcctggaa gtgggagccg ggtcgggata ccagaccgcc ctgctggccc
     3601 atctgtcgac ccacgtgttc gccgtggagc gggtcgccgt cctggcctac gcagccaaga
     3661 aatcgctcga cctcgccggc gtcacgaacg ccacggtgct ggtgggcgac gggaccctcg
     3721 gctggcggtc ctgcgcgccc ttcgacgcga tcgtcgtcgc cgccgcttca cccggaatcc
     3781 ccctgccgct gctggagcag ttgacgcccg gaggccgcat agtgattccg gtgggcgaag
     3841 gtgatcagca ggtgctcaag ctggtggaac ggcagggcga gaccttccgc gaaagcatcg
     3901 tggccgatgt caggttcgtt ccgctgctgg ggaggcatgg gttttgacgg caccgttcca
     3961 ggttcctggt tccaagtacc gggtgcggtg caatgtggtt ttgacggcag cgttccaggt
     4021 tcctggttcc cagtaccggg tgcggtgcaa tgtgcggtgc tatgtgccgt gtgctgcgtc
     4081 accacagcga gccgcatgat ggcataccgg cacggagcac cgtacctggc accgcaccta
     4141 gcaccgcaca cggtacccgg aacgaggaac gaggaaccat ggagttgatc gggaccctga
     4201 tcgatttcat cctccatatc gatcagcatc tgcaggaaat catcggtcag tacggcgccc
     4261 tcacgtactt gatcctgttc ctcatcgtct tctgcgagac cgggctggtg gtgatgccgc
     4321 tgctcccggg cgattcgctg ctgtttgccg ccggcacctt cgccgcgctt gggtcgctca
     4381 acctctggct gctgatcctg ctgctgtgca cggcggccat cgccggcgat accgtcaact
     4441 actggatcgg gcgctggatc ggcccccgtg ccttttccgg acggctgcga tggctgcggc
     4501 aggattatct ccggcggaca gaggagttct acctgcggca cggcggaaag accatcgtcc
     4561 tggcgcggtt catccccatc atccggacct tcgcgccctt cgtagccggc gtgggacgga
     4621 tgaactacac ccggttcatc acctataacg tcgcgggagg gattctgtgg gtggtgctgt
     4681 tcacgctggg cggatacctg ttcggcaacc tgcccgcagt gcgggagaac ttttccctgg
     4741 tggtcctcgc catcatcggc gtatcgatgc tccctctggt gacggaatgg ctcaaggcca
     4801 ggaaacgggc ccggaccccc gccgcgtaac ccgccgatat cgggtcggcg ggcgggtgca
     4861 gggcgtcggc tttcggtatt ttgtcctgcg tcaggcgcag gtcgccggtg tcacggggtg
     4921 ggtcagaaac ctgccgtccg gtgaggtgga ggtcacagcg tccggctccc cggagcacct
     4981 ggccactctg gagcaggcac ttcggagagg gcctcgcttc tccgacgtca cgaaggtgga
     5041 gatctcggag attccggatg aaggagacga cgcaaccgat tttgagattg tcgattagcg
     5101 aggttaagtt tttgggtttc gcccccgtag ctcagcctgg atagagcagc ggtttcctaa
     5161 agcgggttca gctcggcatc actcagcacg gtttgacata actcggcact actcaacacc
     5221 ttcccggtac gagtggtgcc gagtcgtttt gaggaaaaca agccgtttcg agccagagtc
     5281 ccacagtctg tcccacagtc gcccagctct gccgttcgtc actgcggaag ccataccggg
     5341 aggaacagat ttcgcagtat taattgaccc gcgtgaacaa cggcatagac aaacagaatc
     5401 gtgaatatcc aatgcaacca gagcaggtga cggtagcgac tcagggcggg agatacgccg
     5461 gaaaggtcct cctcctcccg catcggggaa atctgccacg tgaggtaggt cctgatgagg
     5521 ttatagatca caagagcgcc cgctggcagc caaaccgtcc atccccgatc cacgccaaac
     5581 acggcgcgcc aaatggttgt tacctgacac gtctcgctca agcacggagt catgcccgat
     5641 acgcgcgtcg agtctgccag tgggaccagc agggtctgga agcgattgat cgaaagccag
     5701 tagagcgtcc gcagaatgag cggggccatg aaggctacca gcagcaccat gtgaaacatg
     5761 gcgcgagtac ccgtgtaccc ttctcttaat tggcgccagc ccggggcacg gagccacgtt
     5821 ccccgggggt cccacaccat gccgctagta actaccgcat cccacgctcc acccttcacg
     5881 ccgcgcagga ctgccttacc aaatcgggtt ccccgaagta cgctgccgcg aaggtt
//
LOCUS       DASWKS010000636         4700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1105631, whole genome shotgun sequence.
ACCESSION   DASWKS010000636 DASWKS010000000
VERSION     DASWKS010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4700
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1105631"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VGA78_18095"
     CDS             complement(<1..483)
                     /locus_tag="VGA78_18095"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9895850.1"
                     /translation="MRRKRLAIIDDEPGFIEFVRQVAESCGMDAFATADPALFRDHLR
                     GSRPDVIVLDLYMPGTDGIELLREIGQLSATSMIFLASGTDTRVLESAFRLGQERGLR
                     MVGAIQKPIRAVELRALLNDLLTGAAPPPRPTELAQALEQDQLDLLYHPTLDLRLRSI
                     V"
     gene            complement(498..2723)
                     /locus_tag="VGA78_18100"
     CDS             complement(498..2723)
                     /locus_tag="VGA78_18100"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HEX9895851.1"
                     /translation="MTIRTGAGPAESSEVLRGWRSLSLGLALVLVLGAGVLATASQRR
                     LLGLVLEVEQSDQVLLHLIELFGALTEAETGQRGYVITGDPVFLEPVRRARVRLPQLI
                     DSLGMEPVGNDRLPSRVDSLSRVLAHRLAMIDSTIEGREVLGAAILTDAARFRRGQAL
                     SDAARALIGALQSDQQRLSAASRARVSAANRVAGLLVWGALGGSVIVAGLLVFGMRTE
                     VTRRRAQRTAALSQVVEEQRKATELLEGLFTQSTFAIIALDADYLVVLWNPAAERMFG
                     VPAGEVLGREGPLLESPPDQAPGLDPRSVFTRAASGERLHNLEVRRFRRDGTIIDLVV
                     STVTLYTAAGKPRGVVEIIEDVTDRKRVNQQLVQAQKMEAVGQLTGGIAHDFNNLLAA
                     IVGNLDMLTEQLAGHPAGAKLARLALEAALRGANLTRQLLAFSRRQPLQPRPMQLNTL
                     INELDELLHRTLGEAIEVQTRLQPDLWIARVDPTQVETAILNLAVNARDAMPRGGRLT
                     IETANRRLDQDYAELNPDSMPGDYTMLGVSDTGTGILPEVLPRVFDPFFTTKEPGKGS
                     GLGLSMVYGFARQSGGHVKIYSEVGHGTTVRLYLPRSLAPGELVAPKEPAGSIAPGRG
                     ETILVVEDSAAVRDTAANLLEGLGYRVLTADRADAAMDLLNGGAHVDLLFTDIVMPGG
                     VSGVDLARMVRARWPGIKVVFTTGFSDDVLPAGLAGPDPMLVKPYQRHELARLLRTLL
                     D"
     gene            complement(2747..3154)
                     /locus_tag="VGA78_18105"
     CDS             complement(2747..3154)
                     /locus_tag="VGA78_18105"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX9895852.1"
                     /translation="MTRDDPAQPPVGHGETILVTEDTDNLRAMLAEMLVGLGYKVLQA
                     ASVSAALAVLADQKVDLLLSDVVMGGQTGGIELARAARAIDPNMRIVLMSGYMEHFLP
                     RAHSEVCDAILMKPYRRHELASRLRELLDTRVS"
     gene            3771..>4700
                     /locus_tag="VGA78_18110"
     CDS             3771..>4700
                     /locus_tag="VGA78_18110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEX9895853.1"
                     /translation="MTAPNSRERILPRPIEEEMKQSFINYSMSVIVSRALPDVRDGLK
                     PVHRRILYAMNDLGLVPGRPYKKSAAVVGEVLAKYHPHGDSAVYDALVRMVQDFSLRY
                     PLVDGQGNFGSVDGDPPAAYRYTEARMTRIAVAALEDIDKNTVAFQPNFDDQREEPTV
                     LPSKIPNLLVNGSSGIAVGMATNIPPHNLREVCGAVEVLARNPSAGLDELLKHIKGPD
                     FPTGGYIYGLQGLREAYETGRGRVVMRARVVVEEKASTGKSALVVTEIPYQVNKARLS
                     EQIVELVLEKRVEGISAVRDESDRDGMRLVIELK"
BASE COUNT          818 a         1557 c         1557 g          768 t
ORIGIN      
        1 gacaatactc cggagccgca ggtccagcgt ggggtggtac agcaggtcca actgatcctg
       61 ctccagcgcc tgggccagct cggtgggacg gggcggcggg gcggcgccgg tgaggaggtc
      121 gttcagcagg gcgcgcagct cgaccgcccg gatcggtttc tggatggcgc cgaccatccg
      181 gagcccgcgc tcctgtccca gccggaacgc gctctccagc acccgggtgt cggtcccact
      241 ggccaggaag atcatcgacg tcgcgctgag ctggccgatt tcgcgcagca gctcgatgcc
      301 gtcggtgccg ggcatgtaga gatccagcac gatcacatcg ggacgggatc cccggaggtg
      361 gtcccggaac agggccgggt cggccgtggc gaacgcatcc atcccgcagg actcggccac
      421 ctgacgcacg aactcgatga agccgggttc gtcgtcgatg atggccagcc gcttgcgtcg
      481 catgccggtc gcttcctcta gtccagcaag gtacgcagca ggcgcgccaa ctcgtgccgc
      541 tgatacggct tcaccagcat cggatcgggg ccggccagtc cggcgggcag cacgtcatcg
      601 gagaagccgg tggtgaatac caccttgatt ccgggccagc gggcccggac catccgcgcc
      661 agatcgacgc ccgacactcc acccggcatc acgatatccg tgaagagcag gtccacgtgg
      721 gctccgccat tcaacaggtc catagccgcg tcggcccgat cggcggtgag cacccggtat
      781 cccaggccct ccagcagatt ggcggccgtg tcgcgcacag cggcgctatc ctccactaca
      841 agaatggtct ctccccggcc gggggcaatg ctgcccgccg gctccttggg ggccaccagt
      901 tccccaggtg ccaaggagcg ggggaggtag agccggaccg tggtgccgtg tcccacctcg
      961 ctgtagatct tgacgtgccc tcccgactgc cgggcaaacc catagaccat gctcagaccc
     1021 aggccagatc ccttcccggg ctccttggtg gtgaaaaagg gatcgaagac ccgcggaagg
     1081 acctcgggta ggatcccggt cccagtgtcg cttacgccca gcatggtgta gtcgcctggc
     1141 atgctgtcag ggttgagctc ggcatagtcc tgatcgagcc gccggttcgc ggtttcaatg
     1201 gtgagccggc ccccgcgcgg catggcgtcg cgcgcattga ccgcgaggtt caggatcgcc
     1261 gtctccactt gcgtgggatc gacccgggcg atccacagat cgggctgcag ccgggtctgg
     1321 acctcgatcg cttcgcccag ggtgcgatgc aacagctcat ccagttcatt gatgagcgta
     1381 ttgagctgca tcggccgggg ttgcaacggc tgccggcgag aaaaggccag caactggcgg
     1441 gtcaggttgg ccccgcgcag ggctgcctcc agcgccagac gggccagctt ggcgccggcg
     1501 gggtggccgg cgagctgctc ggtcagcatg tccagattgc ccacgatcgc ggccaacaga
     1561 ttgttgaaat cgtgggcgat gcctccggtg agctgaccga ccgcctccat cttctgcgcc
     1621 tggaccagct gctgattcac ccgcttgcgg tcggtgacgt cctcgatgat ctccaccacc
     1681 ccgcggggct tgccggcggc ggtgtacaac gtcaccgtgg agacgaccag atcgatgatt
     1741 gtgccgtcgc ggcgaaaccg gcggacctcg aggttgtgca gccgctcacc actcgcggcc
     1801 cgggtgaaga cgcttcgggg atccagcccg ggcgcttggt cggggggaga ttccagcagc
     1861 ggcccttccc gtcccagcac ctcgcccgcc ggcacaccaa acatgcgctc ggcggcgggg
     1921 ttccagagga ccaccaggta atccgcatcg agcgcgatga tagcgaaggt cgactgggtg
     1981 aagaggccct cgagcagctc ggtggccttg cgctgttctt ccaccacctg gctgagggcg
     2041 gcagtccgct gggcccggcg ccgggtgacc tcggtgcgca tcccgaagac gagcaggccg
     2101 gccacgatca cgctgccgcc gagggcaccc cagaccagaa gaccggccac ccggttggcg
     2161 gcggacaccc gggcgcgact ggcggcggag agccgctgct ggtcggactg cagggccccg
     2221 atgagggcgc gggccgcgtc gctcagcgcc tggccgcggc ggaaccgggc cgcatcagtc
     2281 aagatggccg ccccgaggac ttcccggccc tcgatggtgc tgtcgatcat cgcgagacgg
     2341 tgcgccagga cccgggacag gctgtcgacc cggctcggca ggcggtcatt gccgaccggc
     2401 tccatgccta acgagtcgat cagctggggc agccgcaccc gggcgcgccg caccggctcc
     2461 agaaagaccg ggtcgccggt gatcacgtag ccccgctggc cggtttccgc ctcggtgagc
     2521 gcgccgaaga gctcgatcag gtgcagcagc acctggtccg actgctccac ctccaggacc
     2581 aggcccagca gccgccgctg gctggcggtg gcgagcactc ccgccccgag cacgagcacc
     2641 agcgccagcc ccagactcag ggatcgccag ccgcgaagca cttcgctcga ctctgcgggc
     2701 ccggcaccgg ttcgaatggt catgtggcgc gtcgacgacg cgaaactcag gaaacgcgag
     2761 tatccagcag ctctcggagc cgggacgcca gttcatggcg ccggtacggc ttcatgagaa
     2821 tcgcgtcgca gacttccgag tgggcccggg ggaggaaatg ctccatgtac cccgacatca
     2881 atactatccg catgttggga tcgatggccc gggcggcccg tgccaactca ataccgccgg
     2941 tctggccccc catcaccaca tcactgagca ggagatcgac cttctggtcg gccaacactg
     3001 cgagggcagc acttacactg gcggcctgca gaactttgta tcccaacccc accagcatct
     3061 ccgccagcat cgcgcgcagg ttgtcggtgt cctcggtcac gaggatagtc tcgccgtggc
     3121 caaccggggg ctgggctgga tcgtcgcgcg tcattattca gacagcgggt gccgccgcaa
     3181 cactccgctg cctacggctg ggggatcgaa gtcatgtccc cacaagagta tggaggatga
     3241 cgtgaacccg caccctatca cagttgatag ggtccgatgc atgttggaac attatgagct
     3301 aaaccttaac gaagcgatcg catgtaacac tttgaatcga atggccttgc gcgacgaaac
     3361 ccgcggtgcg cataggtgct atggtcgtta cacgtctgtt acaaactaat gggaggtttt
     3421 tcagcctggc caccctgcgc cgttgaagat cccctgcggc ccggcgctca tcgggtcggc
     3481 gatttcgagc agcggcatcg aaagagaact ccccctccac cggatgctgc agcaacagat
     3541 ttgtcgctgc cgagcgaagc tgccgcagct gatagcgccg caaacccgtc gcactgtttg
     3601 acggcgccta actcgcgcat caacctggct gataactcat tgctacgtaa caccttgagg
     3661 tttgtcgccc cgcttgccgg agggccggta ccccggttac ttttagcgtc tgcctgcggg
     3721 atttgtcgcc caggtcccgc tccagctcgc caccccgtct ttgagccgtc atgactgcgc
     3781 ccaactcgcg tgaacgcatc ctgccccgcc cgatcgagga ggagatgaag cagagcttca
     3841 tcaactactc gatgagcgtg atcgtctccc gcgctctccc cgacgtgcgc gacggactca
     3901 agccggtgca ccgccggatt ctgtatgcga tgaacgatct ggggctggtg ccgggacggc
     3961 cgtacaagaa gtccgccgcg gtggtcggtg aagtgctggc caagtaccac ccccacggcg
     4021 acagcgcggt ctatgacgcg ctggtgcgta tggtgcagga tttctcgctt cgatatccgc
     4081 tggtggatgg gcagggcaat ttcggttcgg tcgacgggga tccgccggcg gcgtaccgct
     4141 acaccgaagc ccgcatgacc cggatcgcgg tcgcggcgct ggaggacatc gacaagaaca
     4201 cggtcgcgtt ccagcccaac ttcgacgacc agcgggaaga gccgacggtg ctgccgtcca
     4261 agatccccaa cctgctggtg aacggctcga gcggcatcgc ggtgggtatg gccacgaata
     4321 tcccgcccca caacctccgc gaagtctgcg gcgcggtgga ggtgctggct cgcaatccca
     4381 gcgccggcct ggacgagctg ctcaagcaca tcaagggtcc cgactttccc accggcggct
     4441 acatctacgg cctgcagggg ctgcgcgaag cctatgaaac cggccggggc cgggtggtga
     4501 tgcgggcccg ggtggtggtg gaggagaagg cctccaccgg gaagagcgcg ctggtggtca
     4561 ccgaaatccc ctaccaggtg aacaaggcgc ggctgtcgga gcagatcgtg gagctggtgc
     4621 tggagaagcg ggtggagggg atctcggcgg tgcgggacga gtccgatcgc gacggtatgc
     4681 ggctggtgat cgagctcaag
//
LOCUS       DASWKS010000637         3491 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_341177, whole genome shotgun sequence.
ACCESSION   DASWKS010000637 DASWKS010000000
VERSION     DASWKS010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3491
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341177"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2149
                     /locus_tag="VGA78_18115"
     CDS             <1..2149
                     /locus_tag="VGA78_18115"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9895854.1"
                     /translation="FFQPTLTGVGEPVQLEAVRATPTLHSVLGVPPRLGRWFAAQEGQ
                     QGAAPVVVLSDRLWRERFSADPAVLRRTIDLDGVGFEVVGVMPPEFAFPNAQTRLWVP
                     QGVRRDWIGGWGEKAIARLAPSADPAGMEREMVSLFPRLREDPADPAKVAAYLDDAGV
                     YPRIVPLKDELIGDVRATLWVLFGTVGFVLLIAVANVANLFLVRAEEGQREAAVRTAL
                     GAGRARLARGSLAESLLLAVAAAALGLTGAAAAVRLLRLYAPVNIPRLHEVGLHPEVV
                     AVALGITLLIALLLGVIPALRRHGDLGVALKEGGRRSTADRNRLQGRSVLVATQVALA
                     LMLLIGSGLLLRTFAALRAVDLGFAERQALVFHLGLPGTRYPSRAAASAFHDRLQERL
                     AGLPGIERVGAIGQCLPLVGYMCFGDVLQVEGRPTPEGTVPPVTGLRIASTDYFGTLD
                     IAVRGRSFTPGDQTGPASAAILSRAAAEAYFPGEDPIGRRVRFSPDSPWHTVVGVAND
                     VRGRVETDELKRLIYLPVLPATDEGPHPGLMAYVLATAVPPLSVLPTVQQVVHELDPG
                     LPLADVGTLQGVIDDATAPAAFAFTLVTLAAGIALLLGAVGVYAVIAYAVSRRTAEIG
                     VRLALGASSGDVRWMVLRQGGLVVLAGIGVGLAGAFALTRSLRGMLFGVSPTDFASYA
                     VLTLLMLVVALLALYLPARRASRVDPLEALRTE"
     gene            2174..2386
                     /locus_tag="VGA78_18120"
     CDS             2174..2386
                     /locus_tag="VGA78_18120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895855.1"
                     /translation="MLEVTPRLRQFEREYQRWAYRSLTFHQALARYRAMLHEARRLRP
                     DLGLDWRQDLASDLAMARVLNGLPSA"
     gene            2397..2951
                     /locus_tag="VGA78_18125"
     CDS             2397..2951
                     /locus_tag="VGA78_18125"
                     /inference="COORDINATES: protein motif:HMM:NF039330.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEX9895856.1"
                     /translation="MLLEGLTRGLESRRIPFMLIGGQAVLLHGQPRFTDDIDATLGVG
                     PDQLSTVLEACSATGLEPLPPDLPAFVAETFVLPTRHAPSGLRVDLIFSTLPYEADAI
                     RRAIRVRIGATDVPFATAEDLLIHKLFAGRPRDLEDAVGVIRRQGDALDWAYVTRWIS
                     AFAEVPGRERLSGMLEELRRTAEE"
     gene            complement(2975..>3491)
                     /locus_tag="VGA78_18130"
     CDS             complement(2975..>3491)
                     /locus_tag="VGA78_18130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895857.1"
                     /translation="RKVERVGSKDDRLTPLTLLPPLGRQESGWILHELQRQRLHPGHP
                     VGLDPVPKPVALRRERDDGKQRQQDRKNDRPRGGGAKVQIAAIRSAVTGRGVRRTTRW
                     QWWGSVYEVFTIPKELRDGVELMDDRLELTGQGGVSVEERRSRATITFWGRTADGVGI
                     EGTIHCQGFNP"
BASE COUNT          460 a         1190 c         1201 g          640 t
ORIGIN      
        1 gttctttcag cccaccctga ccggcgtggg cgagccggtc cagttggagg cggttcgagc
       61 cacgcccacc ctgcacagcg tcctcggggt gccgccgcgg ctgggccgct ggtttgcggc
      121 ccaggaggga cagcagggcg cggcgcctgt cgtcgtgttg tcggaccggc tctggcgcga
      181 gcggttcagt gccgatcccg cggtgctgcg ccgcaccatc gatctggatg gggtcgggtt
      241 cgaagtggtc ggggtgatgc ctccggagtt cgcgttcccc aacgcgcaga cccggctctg
      301 ggttccgcag ggcgtgcggc gggactggat tggcgggtgg ggcgagaagg ccatcgcgcg
      361 cctcgcgccg tcggcggacc ccgccgggat ggaacgggag atggtgtcct tgttcccgcg
      421 cctgcgtgag gatccagcag accccgcgaa ggtggcggct tatctggacg acgccggggt
      481 ctatccccgt atcgtgccgc tgaaggacga gctgatcggc gacgtccggg ccaccttgtg
      541 ggtgctgttc ggcaccgtcg gtttcgtgct gttgatcgcg gtcgcgaacg tggcgaacct
      601 gttcctggtt cgggccgaag agggccagcg cgaggccgcc gtccgcacgg cgttaggtgc
      661 cggccgggcg cgcctggcgc ggggctccct ggccgaatcg ctgctgctgg ctgtcgccgc
      721 cgctgcgctg gggctgaccg gcgcggccgc ggcggtgcgc ctgcttcgac tctacgcccc
      781 ggtcaatatt ccccggctgc acgaggtcgg actgcatccc gaagtggtgg ccgttgccct
      841 ggggatcacc ctgctgatcg ccctgctcct cggcgtgatt cccgcgctcc gccgtcacgg
      901 cgatctgggt gtggcgttga aagagggcgg ccggcgcagc accgccgatc ggaaccggct
      961 gcaaggccgg agcgtgctgg tcgcgaccca ggtggcgctc gcgctgatgc tgctgatcgg
     1021 ctcggggctc ttgctccgca ccttcgccgc gttgcgcgcc gtggatctcg gcttcgccga
     1081 gcgccaggcc ctggtctttc acctcggcct cccgggcacc cgctacccca gccgtgccgc
     1141 cgccagcgcg ttccacgacc gcctgcagga gcggctggcc ggactccccg gtattgaacg
     1201 ggtcggggcc atcggccagt gtctccccct ggttggctac atgtgttttg gcgacgtgct
     1261 ccaggtggaa ggccggccga cacctgaggg cacggtgccc ccggtcaccg gcttgcgcat
     1321 cgccagcacg gactacttcg gaaccctcga cattgccgtg cgcggccgca gcttcacccc
     1381 gggggaccag accggcccgg caagcgctgc gatcctgagc cgcgcggctg cggaagcata
     1441 cttcccgggt gaggacccga tcggccggcg ggttcggttc agtccggaca gtccgtggca
     1501 caccgtagtc ggcgtggcca acgacgtgcg cggccgggtc gagaccgatg agctcaagcg
     1561 acttatttac ctgccggtgc tgccggcgac cgacgaaggc ccccatccgg gcctgatggc
     1621 ctacgtgctc gcgaccgccg tccccccgct gtcggtcctg cccaccgtgc aacaggtggt
     1681 gcatgaactc gatcccggcc tgccgctcgc cgacgtgggc acgctgcagg gggtaatcga
     1741 cgatgccacc gcgccggccg cgtttgcatt caccctggtg acactcgcgg ccggcatcgc
     1801 gttgctgtta ggcgcggtcg gcgtatatgc cgtgattgcc tacgccgtga gccgccgcac
     1861 cgccgagatc ggggtgcggc tggccctcgg ggccagctcg ggtgacgtgc gctggatggt
     1921 gctgcggcag ggcgggctgg tggtactggc cggtatcggg gttggcctgg cgggcgcgtt
     1981 cgcgctgacg cgaagcctgc ggggcatgct gttcggggtg agccccaccg acttcgccag
     2041 ctacgcggtg ctgacgcttc tgatgctggt ggtggccctg ctggcgctct atctgcccgc
     2101 ccgacgagcc tcgcgagtcg acccgctcga agcgcttaga accgagtagg tccgcgcagc
     2161 ggtatatttg agaatgcttg aggtcactcc ccgcctgcgt cagttcgagc gggaatatca
     2221 acggtgggcc taccggtccc tgacttttca tcaggcgctg gcccgatatc gagcgatgct
     2281 gcatgaggcc cgccggctcc gacccgacct ggggctggac tggcgtcagg atctcgcgtc
     2341 ggatctcgcg atggcccggg tcttgaatgg cctcccctcc gcctgatgaa ctgacgatgt
     2401 tgctggaagg gctgacccgc gggctggagt cccggcggat ccccttcatg ctcatcggcg
     2461 gccaggcggt gttattgcac gggcagcccc gattcaccga cgacatcgat gcgacgctgg
     2521 gggttgggcc tgatcagctc tcgactgtgc tcgaggcctg ctccgccacc ggtctcgagc
     2581 cgcttcctcc cgatcttccc gcctttgttg ccgagacgtt tgtgcttcca acccgccatg
     2641 ctccgtccgg gctgcgggtg gatctcatct tctcgaccct gccctacgag gcagacgcga
     2701 tcaggcgggc tatccgggtg cggattggtg ccaccgacgt accgttcgcg accgcggagg
     2761 atctgctgat ccacaaactg ttcgcgggac ggcctcgcga cttggaggat gctgtcggcg
     2821 tgatccggcg gcagggcgat gcactggact gggcctacgt cactcgatgg atcagtgcct
     2881 tcgcggaggt gccggggcgt gagagattgt ccgggatgct cgaggagctt cgccggaccg
     2941 ccgaggaata gtcacccaga accgaataac tggttcaggg gttgaacccc tggcagtgaa
     3001 tagttccctc gatcccgacg ccatcggcgg tccggcccca gaacgtgatg gtggctctgc
     3061 tgcgccgctc ctcgacgctg acgccgccct gcccagtcag ctcgagccga tcatccatca
     3121 actcgactcc gtcccggagc tccttcggga tggtgaacac ctcatacacg ctcccccacc
     3181 actgccaccg agtggttcgc cgaacaccac gaccagtgac agcactccgg attgcggcaa
     3241 tctgaacttt cgctccgccg cccctcggcc gatcgttctt gcggtcctgc tgacgctgct
     3301 tgccatcgtc ccgctcccgg cgcaaagcaa ccggcttcgg aaccgggtcg aggccgaccg
     3361 ggtgacccgg gtggagtcgt tgccgctgta gctcgtgcag gatccatccg ctctcctgcc
     3421 gccccagcgg cggcaggaga gtaaggggcg taagccgatc atccttgctt ccgactcttt
     3481 cgaccttccg a
//
LOCUS       DASWKS010000638        11992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2946267, whole genome shotgun sequence.
ACCESSION   DASWKS010000638 DASWKS010000000
VERSION     DASWKS010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11992
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2946267"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VGA78_18135"
     rRNA            <1..411
                     /locus_tag="VGA78_18135"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            467..583
                     /gene="rrf"
                     /locus_tag="VGA78_18140"
     rRNA            467..583
                     /gene="rrf"
                     /locus_tag="VGA78_18140"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            756..2096
                     /locus_tag="VGA78_18145"
     CDS             756..2096
                     /locus_tag="VGA78_18145"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895858.1"
                     /translation="MPRITWALSLGLSLGTAFLWIPPVHSQTPVDSALYAYIKSVRAI
                     DNHTHAGLPILPGQPADSDFDALPVGNLPPYSFPARLTTQNPEFITAWRELYGYPYQD
                     RTEEHVRELLALKARIRLEHGVHYAAWVLDRLGTDVALANRMSVGPGLEAPRFRWVPF
                     ADPLLYPLDSKTVAAVTPDRMDLVPRERKHIQRYLGALGLEAVPTTLAEYTRLVVTPT
                     LERFRREGAVAIKYEIAYLRSLDFDTVSATRAAGVYDRFARSGAPSVTEYKLVQDYLF
                     RFIAKEAGRLGLVVHLHAFDGAGGYFLAAGADPLLLEPVFTDPTLRGTRFVLVHGGWP
                     YPRHTLSLFGKPNVYADISFLGSVNSPAITAGVLREWLTFFPDKVLFGSDAYPDTPEL
                     GWEEWGWLGATGAKRALAMALTAMLQDGEVTREGAERLATMVLRGNAEKLYGLR"
     gene            2227..3159
                     /gene="era"
                     /locus_tag="VGA78_18150"
     CDS             2227..3159
                     /gene="era"
                     /locus_tag="VGA78_18150"
                     /inference="COORDINATES: protein motif:HMM:NF000908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEX9895859.1"
                     /translation="MPGDPHEPTVSPSVRPSVQQCGHVALAGRPNVGKSALLNALVGE
                     HLAIVSPKAQATRLPVVGLRTEADVQFIFHDLPGLLDPDYLMQQRMRELALQGARRAD
                     VIVHLHPAPEAPAPDFTTLAGLSQPLPAPVLTVYTKADLVPDRLTDRPTDGPGAHWVS
                     ATTGEGIPELLREIAALLPIAPFEFPADDLGTQPLRFFAVEYLREAAFELLGDEVPYA
                     FTAEVDEFREHTDPVYIRATLYVERNSQKGILIGEGGRTIKELGRRARMRLEQLMGQR
                     VFLETWVKVLANWRKDGALLERFGFPGHRSSSDP"
     gene            3190..3360
                     /locus_tag="VGA78_18155"
     CDS             3190..3360
                     /locus_tag="VGA78_18155"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEX9895860.1"
                     /translation="MSIPPELLEILVCPKCKGDLEYRREPEEQLVCHACRLVYRVEDD
                     IPIMLIDEATPL"
     gene            3362..5014
                     /gene="cax"
                     /locus_tag="VGA78_18160"
     CDS             3362..5014
                     /gene="cax"
                     /locus_tag="VGA78_18160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HEX9895861.1"
                     /translation="MTDPTPPSSPGLGDAARLLAEAAQIEAQSLGHPFVGLEHVLLAL
                     LADSSLATLGKGRGLPAREELRRRLSTSPAPRPIAGTGEYGLSPQARRALEGSAPFDR
                     TALLERIMANPRGPLARLLETGGQADRRAGGQPASGQAGAPPADRRPRGPAGERDKGR
                     KPRETRPVTERLRESRNTAEGQRREQPRKVARPSGGPTARPWWLSWRSLMLLFVPATI
                     GLNLMHANPLVVFIAACLGVIPLAGVMGEATEHLAARSGPAIGGLLNATFGNAAELII
                     AIAALRSGLIDLVKASITGSILGNLLLIMGLCFLAGGIGRPTLRFNRVSAGASAGMMA
                     LAVVGLVFPALFHSIRPEAGFPRELMLTESVALVLAVTYGFSLLFSLKTHRSLFGGEP
                     HPTVGEIWSPIKATVVLGLATLGVVVQSEILVHATENVTATMGFSETFLGLIIVPIIG
                     NAAEHGTAVLVARKGQMDLAMQIALGSSTQVALLVAPVLVLVGLLLGRPMDLVFTTFE
                     VAALALTMVVSAIITLDGESNWFEGVQLLAMYALVAAMAFFV"
     gene            5188..6168
                     /locus_tag="VGA78_18165"
     CDS             5188..6168
                     /locus_tag="VGA78_18165"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX9895862.1"
                     /translation="MRTRPTILYYGPVDVPVPELIRRWAENKGFPLLVLERRDEVESI
                     VMRGHPSLLVVDGERMAESAKVLVAAIKADPFSAIVPVTVLEGAHDPESMQQWFAAGA
                     DEILTAVFPPPEQRARLDAMLVRTQRDVAVHPSTRMPGTTEIEREIRRQLETGHEFAV
                     CYADLDHFKEFNDRYSYYDGDRVIYLLSRILHDVVKGLQGPRGFVGHIGGDDFIFILP
                     AEAVDTVCTEILDVFDTLVPLQYNEQDSRAGYFFGKDRRGQLHRVPLMTLSIGIVTNR
                     HRNFSHPAEVSELATEMKSYAKTLPGSVYVVDRRRARDAEGRGVTGREPR"
     gene            6176..6910
                     /locus_tag="VGA78_18170"
     CDS             6176..6910
                     /locus_tag="VGA78_18170"
                     /inference="COORDINATES: protein motif:HMM:NF025094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEX9895863.1"
                     /translation="MNVSCPKCETVFRVDPAKVPVRGVRARCSACSAVFFVGRPVEPE
                     FAPAPAPTPVTAPATYHAPPPPLTTPARPLAPPTHAPPAVMPPAGAGVRPAQAPAAAA
                     ATAPPPPAVGPRSAPEPAQPVTARAAAAPPAAPLPPPAAPVFSAPPTPPAPPRRPVNP
                     FLASDPATKARRLARALISDLVVYHPGKRADGLRDGTLKILFEDEIRKCWEEYTEQVG
                     MEMATSTRYFTEALNEILADGQPVFS"
     gene            7007..8111
                     /gene="prfB"
                     /locus_tag="VGA78_18175"
     CDS             join(7007..7063,7065..8111)
                     /gene="prfB"
                     /locus_tag="VGA78_18175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_319006963.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEX9895864.1"
                     /translation="MSILTDRLTELDQRFAELRGSFDLERKRARLKELEDRQSDAGFW
                     ANQDQAQATVQELKTLRALLTPVQAYEQRLADARTMAEMLDESPDDDLAQELEQETGG
                     LEHSLEDLELRTMLLGPDDARDAILTIHPGAGGTESQDWAEMLMRMYVRWAERKGFDV
                     SIMDLQPGEEAGIKSATIEINGEFAYGFLKAEKGVHRLVRISPYDAQARRHTSFASVF
                     VYPDIDDTIEIDLRDDDIKMDVFRASGAGGQHVNKTSSAVRLTHLPTKIVVSCQQERS
                     QFKNKETAYKMLRAALYQRRLEEQEAERAKVEATKTDISWGNQIRSYVFQPYTMVNDH
                     RTELKVGDVQRVMDGDLDEFIQAFLRQQGGSAA"
     gene            8108..9616
                     /gene="lysS"
                     /locus_tag="VGA78_18180"
     CDS             8108..9616
                     /gene="lysS"
                     /locus_tag="VGA78_18180"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF001756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX9895865.1"
                     /translation="MTEERTYVEAARRASREALEAMGVAPFAYRFDRSHQAAAAVALY
                     QDAMGDAGPVVSVTGRLTAWRSQGKTAFGHVEDRSGRIQLYFRQNDLADSWRVLEHLH
                     LDDHLGATGRLFRTRTGEVTVRVERFTLLTKSLRPLPRGKLQKNPDGSETLFGGLADP
                     ETRYRQRYADLAVHPDIRTVFETRARAIRFLRHYLDQLAFLEVETPILQPMYGGASAR
                     PFVTHHNALDMRLYLRVADELYLKRLIVGGLERVYEIGHDFRNEGMDRTHNPEFTMLE
                     CYQAYADYTDFMMLVEGMISGVVVECCGGPRIERQGVTLDFTPPFQRVSFVEGVRERA
                     GLDVRTAPDGEMRAALVRKGMAPDEAAGSSGGKLQDEVFRLFLEPDLVQPTFVLDYPK
                     ALSPLAKVHRADPNLTERFELFVQGRELANAFSELNDPDDQRARFEDQARQRAAGDDE
                     AQPHDADYIRALEYGMPPTAGLGVGVDRLMMVLTGQPSIRDVILFPAMRPEQ"
     gene            9621..10886
                     /locus_tag="VGA78_18185"
     CDS             9621..10886
                     /locus_tag="VGA78_18185"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9895866.1"
                     /translation="MTPLRLPTRLELRLAARYLRGRGRLFGLSLNTVIAAAGVMIGVA
                     ALIVVLGVMNGLRDELRDRILVANPDLRILTYGQSLRMDPWRGALDSVLTEPGVVAAA
                     PEVLTQSLARNGAGYMAVVNVVGMADTGSRSVTTLPAAIKEGDLSFRTTHDSVDGGII
                     LGYRLANRMSAFPGDVIELIGYASAQVNRALGQVVPRFWRMEVTGVFETGMFQYDDGF
                     GVLSMAMAQQLDGLGDAVSGIQIKVEDPWQAPAIGRRLEERLGYPYRALDWQTQNAQL
                     FSALQLEKLGMGLIICIIMIVAAFNIVGTLTMVVADKTREIGILRAMGLTGSAIGRVF
                     VIQGAIIGAVGTVLGMGLGLALAYLIDRSGLIRINPSVYFVDRLPVHVELIDVLIVAA
                     VSLAVATVATIHPSRAAARLVPVEAIRHE"
     gene            10879..11586
                     /locus_tag="VGA78_18190"
     CDS             10879..11586
                     /locus_tag="VGA78_18190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX9895867.1"
                     /translation="MNEPVLEATDLRKDYVGGDGAPIHVLTGVQLTVSPGEFVAIIGA
                     SGSGKSTLLHLLGALDDPSGGDVTLAGQRYAELSPAELAALRNRQIGFVFQFHHLLRD
                     FTALENVMMPLLIAGAGAAEAGRRARAVLETMGLGERLLHRPGQLSGGEQQRVAVARA
                     LAPEPALLLADEPSGNLDPANAERLHGLLAGVSRDHGRALVVVTHNRALADLADRVLA
                     LHEGVLALPRGDEVMAP"
     gene            11583..>11992
                     /locus_tag="VGA78_18195"
     CDS             11583..>11992
                     /locus_tag="VGA78_18195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895868.1"
                     /translation="MTEERQKCDECGERDVVVRVTHVVDGEAREIKLCERCAAEKGIQ
                     TSASVTQTPLGGFLNALWKTAEPAGTELGPVGKCPGCGASFADFRETGRLGCADCYKA
                     FEAPLRILIRRYHGSTHHHGRRHVSAEVLASLPQ"
BASE COUNT         1923 a         4052 c         4048 g         1969 t
ORIGIN      
        1 ttggcacctc gatgtcggct tatcacatcc tggggctgga gaaggtccca agggtccggc
       61 tgttcgccgg ttaaagtggt acatgagctg ggttcagaac gtcgtgagac agttcggtct
      121 gtatccgtcg tgggcgtggg aacgttgagg agtgtcgtcc ttagtacgag aggaccggga
      181 cgaagtgacc gctcgtgtac gggctgttcc gccaggggca gcgcccggta gcgatgtcgc
      241 gcagcgataa ccgctgaatg catctaagtg ggaaacgctc tccaagatga acgttcctga
      301 gtcttaagac tcctgaaggg ccctgggaga ctaccaggtt gatagggcgc agatgtacgg
      361 gccgcaaggc cttcagtcga gcgctactaa tcgcccgtgc agtttgatct ctccaaatgg
      421 ttttggtacc caacgagctt ccggatctgc gattgttttg ttcttggctg acgattagcg
      481 cgcaggggcc acacccgttc ccattccgaa cacggccgtt aagccttgca gcgccgatgg
      541 tactgccact gagaggtggt gggagagtag gccatcgtca gccgcccctt cacgaagccc
      601 cgttcaacct tgagcggggc ttcgtcgttt gcgaccggac cgacggaccg acttggggtc
      661 gttgcgttgg gggggcgcaa ggctgggcca ggcgatgtct ggcgcccgcc cgcgacgcgg
      721 gtacgattcg acccatccat ctcaccgggc ctgtcatgcc acgtatcacc tgggcgcttt
      781 ccctgggcct gtccctcggc acggcctttc tctggatccc gccggtccat tcccagacgc
      841 cggtggactc ggcgctctac gcctacatca agagcgtccg cgccatcgac aaccacaccc
      901 acgcgggtct cccgatcctt cccggccagc cggccgacag cgatttcgac gcactgccgg
      961 tgggcaacct gccgccctac tcgttcccgg cgaggctgac aacccagaat cccgagttca
     1021 tcaccgcgtg gcgcgagttg tacggctatc cgtaccagga ccggaccgag gagcatgtgc
     1081 gcgagctcct ggcgctcaag gcacggatcc gccttgagca cggcgtgcat tacgccgcat
     1141 gggtactcga ccggctcggc accgacgtcg cgctcgccaa ccgcatgtcg gtgggcccag
     1201 gactcgaggc gccgcggttt cgctgggtcc cgttcgccga tcccctgctg tacccgctgg
     1261 actcgaagac ggtcgccgcc gtgacgccgg accggatgga cctggtcccc cgcgaacgca
     1321 agcacatcca gcgctacctc ggcgcgctgg gactcgaggc cgtgcccacc acgctggccg
     1381 aatacaccag gctggtggtg actcccaccc tggaacggtt ccgtcgagag ggggcggtgg
     1441 caatcaagta cgagatcgcg tatctgcggt cgctggactt cgacacggtt tcggcgaccc
     1501 gcgccgcggg ggtgtatgat cgatttgccc ggagcggcgc gccgtcggtg accgagtaca
     1561 agctggtcca ggactacctg ttccggttca tcgccaagga ggcgggccgg ctgggcctgg
     1621 tggtgcacct ccacgccttc gacggagccg gagggtactt cctggccgcg ggcgccgatc
     1681 ccctcctgct cgagccggtc ttcaccgatc cgacgcttcg cgggacgaga ttcgtgctgg
     1741 tccacggcgg ttggccctac ccacggcata ccctttcgct gttcgggaag ccaaacgtct
     1801 acgccgacat ttcgttcttg gggagcgtga attctccggc catcacggcg ggtgtcctcc
     1861 gcgagtggct gaccttcttt ccagacaaag tcctgtttgg atccgacgcc tatcccgaca
     1921 cgccggagtt ggggtgggag gaatggggct ggctcggggc cacgggggca aagcgcgcgc
     1981 tcgccatggc gctcacggcg atgctccagg acggcgaggt gactcgcgag ggggcggagc
     2041 ggctcgcgac gatggtcctg cggggcaacg cggagaaact ctacggcttg cgatgacgtg
     2101 atcctccgca ggtatgcccg acagtagccc gggccacgga accgctgtca cctggtgacc
     2161 caattaggtc ggacggtctg ccggaccgac ggaccgacgg accgacggac cgaccatatt
     2221 acggacatgc ccggcgaccc ccacgaaccg accgtcagtc cgtccgtccg cccgtccgtc
     2281 caacaatgcg gccacgtcgc gctggccggc cggcctaacg tcgggaagtc cgcgctcctc
     2341 aatgcgctgg tcggcgagca cctcgccatc gtcagtccca aggcccaggc cacccggctg
     2401 cccgtggtgg gcctgcgcac cgaagctgac gtgcagttca tcttccacga cctgcccgga
     2461 ctactcgatc ccgactacct gatgcagcaa cggatgcggg agctggcgct ccagggtgcc
     2521 cggcgggccg acgtcatcgt ccacctgcac cccgcgcctg aggctcccgc gcccgacttc
     2581 accaccctcg ccgggctttc ccaaccactt cccgccccgg tactcacggt ctacaccaag
     2641 gccgacctgg taccggaccg actgaccgac cgaccgaccg acggtcccgg tgcccactgg
     2701 gtttcggcca cgacgggcga ggggattccc gagctgctgc gcgagatcgc cgcgctcctg
     2761 cccatcgctc cgttcgaatt ccccgccgac gacctcggca cccagccgct ccggtttttc
     2821 gcggtcgagt atttgcgcga agcggccttc gagctgctgg gcgacgaggt tccttacgcc
     2881 ttcaccgccg aggtggacga attccgcgag cacaccgatc cagtgtacat tcgggcgacg
     2941 ctctacgtcg agcgaaactc ccagaagggc attctgatcg gtgaaggcgg ccggaccatc
     3001 aaggaactcg gccgccgcgc ccgcatgcgc ctggagcagc tgatgggaca gcgggtgttc
     3061 ctcgaaacct gggtgaaggt gctggccaac tggcgaaagg acggcgcact gctcgaacga
     3121 ttcgggtttc ccggccaccg gagctccagc gacccgtgat tcgcgacccg cgatcatgac
     3181 gctcacgcca tgagcattcc tcccgagctg ctcgagatcc tggtctgtcc caagtgcaag
     3241 ggcgatctgg agtatcgccg cgaaccggag gagcagctgg tctgccacgc ctgccggctg
     3301 gtgtatcggg tggaggacga catcccgatc atgctgatcg acgaagccac gcccctctga
     3361 catgaccgat cccactccgc cttcgtctcc cggtctggga gacgccgccc ggctgctggc
     3421 tgaagccgcc cagatcgaag cccaatcgct cggtcaccca ttcgtcggac tggaacacgt
     3481 cctgctggcg ctgctggccg acagctctct ggccactctg gggaaggggc ggggcctgcc
     3541 ggcccgggag gagctccgcc gccgcctcag cacctcgccc gcgccccgcc cgatcgccgg
     3601 gaccggcgag tatggactga gcccacaggc ccgccgggca ctcgaggggt ccgctccatt
     3661 cgaccggacc gcgctgctgg agcggatcat ggccaatccg cgcggcccgc tggcgcggct
     3721 gctggagacg ggcgggcagg cggacaggcg ggcaggcggg caacccgcga gcgggcaggc
     3781 aggcgcacca ccggcggata gacgaccgag ggggccggca ggcgaacgag acaaagggcg
     3841 aaagccgcgg gaaactcggc ccgtcacgga gaggctcagg gagtcgagaa acaccgcgga
     3901 gggccagcgt cgggaacagc cgcgcaaagt ggcccgcccg tccggcggcc cgaccgcccg
     3961 cccgtggtgg ctctcctggc gcagcctcat gctgctgttt gtcccggcga ccatcgggct
     4021 caacctgatg cacgccaacc cgctggtggt cttcatcgcc gcgtgtctcg gcgtcatccc
     4081 gctggccggc gtcatggggg aggccaccga acacctggcc gcgcgttccg ggccggccat
     4141 cggtgggctg ctcaacgcca ccttcggcaa tgccgccgag ctgatcatcg cgattgccgc
     4201 gctgcgatcg ggactcatcg acctggtgaa ggcctccatc accggcagca tcctgggcaa
     4261 cctgctgttg atcatgggac tctgtttcct ggccggtggc atcggtcgtc ccacgctccg
     4321 ctttaaccgg gtatccgccg gcgccagtgc tggcatgatg gcgctggcgg tggtgggcct
     4381 ggtgttcccg gccctgtttc acagcattcg acccgaggcc ggattccccc gggagctgat
     4441 gctgaccgaa tcggtggcgc tggtcctggc ggtcacgtat ggtttctcat tgctgttctc
     4501 cctcaagacg caccggtcgt tgttcggggg ggagccgcat ccgaccgtgg gcgagatctg
     4561 gagtccgatc aaggcgacgg tggtcctggg cctcgcaaca ctcggcgtgg tggtacaatc
     4621 ggagatcctg gtccacgcca ccgagaatgt gaccgccacc atggggttct ccgagacgtt
     4681 cctcggtctc atcatcgtcc cgatcatcgg aaacgcggcc gagcacggta ccgcggtgct
     4741 ggtggcccgc aaaggccaga tggacctggc catgcagatc gccctgggat cgagtaccca
     4801 ggtggcgctg ctggtggcgc ccgtgctggt gctggtcggc ttgctgctgg gacggccgat
     4861 ggacctggtc ttcaccacct tcgaggtggc ggccctggcg ctgaccatgg tggtgagcgc
     4921 catcatcacg ctggacggag agtccaactg gttcgagggg gtacaattgc tggccatgta
     4981 tgctctggtc gcggcaatgg cctttttcgt ctgacgggca ggcgggctgg cggtcgggcg
     5041 ggcaggcggg caggggtcgg aaactcgagg atcgatggcg gttaaccgtc cgccagcccg
     5101 tccgaccggc tgcccgcccg atttgacaag ctgtcgcgac acagcgtaag tttttaagac
     5161 acctatagtt acgaggagac gccccgggtg cggacccgac cgaccattct ctattacggg
     5221 ccggtcgacg tgcccgtccc cgagctcatt cgacggtggg cggaaaacaa gggctttccc
     5281 ctcctggtac ttgagcggcg tgacgaggtc gaatcgatcg tcatgcgggg ccaccccagc
     5341 ttgctggtgg tggacgggga acggatggcg gagagcgcca aggtcctggt ggcggccatc
     5401 aaggccgatc cgttcagtgc catcgtgccc gtcaccgtcc tggaaggggc gcacgacccg
     5461 gagtccatgc agcagtggtt cgccgccggg gccgatgaga tcctcaccgc ggtcttcccc
     5521 ccgcccgaac aacgggcccg gctggatgcc atgctggttc gcacccagcg cgacgtggcg
     5581 gtgcatccca gcacccggat gccgggtacc acggaaatcg agcgggagat ccggcgccag
     5641 ctcgaaaccg ggcacgagtt cgcggtctgc tacgccgatc tggaccattt caaggaattc
     5701 aacgaccgct acagttacta tgacggcgac cgggtgatct acctgctctc ccggatcctg
     5761 cacgacgtgg tgaaggggct ccagggaccg cgtgggttcg tggggcacat cggcggcgac
     5821 gatttcattt tcatcctgcc ggccgaggcg gtcgataccg tgtgcaccga gatcctggac
     5881 gtgttcgaca ccctggtgcc gctgcagtac aacgagcagg acagcagggc aggctatttt
     5941 ttcgggaagg accggcgggg tcaactgcac cgggtgccgc tcatgacgct gtcgatcggg
     6001 atcgtcacca accggcaccg gaatttcagc catccggccg aagtgagtga gctggccacg
     6061 gaaatgaaga gttacgccaa gacgcttccg ggctcggtct acgtggtaga ccggcgccga
     6121 gcccgagatg ccgagggccg gggcgtcacc ggccgggagc cgaggtgaag ctgccatgaa
     6181 cgtcagctgc cccaaatgcg agacggtgtt ccgggtggat ccggccaagg tcccggttcg
     6241 tggggtccgg gcccgatgct ccgcctgttc cgcggtgttc ttcgtggggc ggccggtgga
     6301 accggagttc gccccggctc cggcgccaac tcccgttacc gctcccgcga cctatcacgc
     6361 gccccctccg ccgctcacga ccccggcccg ccccctggcc cctccgaccc atgctcctcc
     6421 cgcggtgatg ccgcccgcgg gggcgggagt gagaccggcc caggccccgg ccgccgccgc
     6481 cgccacggcg cccccgcctc cggcggtcgg cccccgatcg gccccagagc cagcccagcc
     6541 ggtaaccgct cgagccgcgg cagccccgcc cgccgcaccg ctcccgccgc cggcagcgcc
     6601 ggtcttttcg gcacccccga cccctccggc gcccccgcgg cgaccggtga acccgttcct
     6661 cgcctccgac ccggccacca aggcccgccg gctggcgcgg gccctcatct cggatctggt
     6721 ggtgtaccat cccggcaagc gggccgacgg gctgcgcgac ggcacgctca agatcctgtt
     6781 cgaggacgag atcaggaaat gctgggagga atacaccgag caggtgggga tggagatggc
     6841 cacgtcgacg cgctacttca ccgaggccct gaatgagatt ctggccgacg ggcagccggt
     6901 gttttcctaa ggcgcgaggt accggtcgca gggcttctac cccattatct ttgtggctga
     6961 cggccgctcc cccgcctgcg gggggcggtt attcgtatga gggaccatgt cgatcctgac
     7021 cgatagactc accgagttgg accagcgctt cgccgagctc aggaggttcc tttgacctcg
     7081 agcgcaagcg cgcccgcctg aaagaactcg aagaccggca atccgatgct gggttctggg
     7141 ccaatcagga ccaggcccag gccaccgtcc aggagctcaa gacgctccgg gcgctgctga
     7201 ccccggtgca ggcgtatgag cagcgcctgg ccgacgcccg caccatggcc gagatgctgg
     7261 acgaaagtcc cgacgacgac ctggcccagg agctggaaca ggagaccggt ggcctggagc
     7321 actcgctgga agatctcgag ctccgcacca tgctgctggg gccggacgac gcccgcgacg
     7381 cgatcctcac catccatccc ggggccggcg ggaccgagtc gcaggactgg gccgagatgc
     7441 tgatgcggat gtacgtgcgc tgggccgagc gcaagggatt cgacgtcagc atcatggacc
     7501 tccagcccgg cgaggaagcc gggatcaagt cggccaccat cgagatcaac ggcgaattcg
     7561 cctacggctt cctcaaggcc gaaaagggag tccaccgact ggtgcggatc tcgccgtacg
     7621 acgcccaggc ccgccggcac acctccttcg cctccgtctt cgtgtatccc gacatcgacg
     7681 acaccatcga gatcgacctc cgggacgacg acatcaagat ggatgtcttc cgcgcgtcgg
     7741 gcgccggcgg acagcacgtc aacaagacct cctccgcggt gcggctcacc cacctgccca
     7801 ccaagatcgt ggtctcgtgt cagcaggagc ggagccagtt caagaacaag gaaaccgcgt
     7861 acaagatgct gcgcgcggcc ctctaccagc gccgattgga agagcaggaa gcggagcggg
     7921 ccaaggtgga agccaccaag accgacatct cctggggcaa ccagatccgg tcctacgtgt
     7981 tccagccgta caccatggtg aacgaccatc gtaccgagct caaggtcggc gatgtgcagc
     8041 gggtcatgga cggtgatctg gacgagttca ttcaggcgtt cctgcggcag cagggcggga
     8101 gcgccgcgtg accgaagagc gcacctacgt cgaagcggcg cgccgggcca gccgggaagc
     8161 gctcgaggcc atgggcgtag cacccttcgc ctaccggttt gatcggtccc atcaggccgc
     8221 ggcggcggtc gcgctctacc aggacgcgat gggcgatgcg gggcccgtgg tctcggtcac
     8281 gggccggttg acggcctggc ggtcccaggg gaagaccgcg ttcggccatg tggaggaccg
     8341 ctccggccgc atccagctct acttccgcca gaatgatctg gcggactcgt ggcgggtgct
     8401 ggagcatctc cacctggacg accatctcgg cgccaccggc cggctgttcc gaacccgcac
     8461 cggggaagtg accgtgcggg tggagcgatt caccctgctg accaagtcac ttcggccgct
     8521 ccctcggggg aagctccaga aaaatccgga cggcagcgag accctgttcg gcgggctggc
     8581 cgacccggaa acccgttacc gccagcgcta cgccgatctg gcggtgcatc ccgacatccg
     8641 gaccgtgttc gaaacccggg cgcgggctat ccgctttctc cgccactacc tggaccagct
     8701 ggctttcctc gaggtcgaga ccccgatcct gcagccgatg tacggtggtg cctcggctcg
     8761 cccgttcgtg acgcatcata atgccctcga tatgcgtctc tatctgagag tggccgacga
     8821 gctgtatctc aaacggctga tcgtgggagg gctggagcgg gtgtacgaga tcgggcacga
     8881 tttccgcaac gaggggatgg atcggaccca caaccccgag ttcaccatgc tggagtgcta
     8941 ccaggcatac gccgactaca ccgatttcat gatgctggtc gaaggcatga tctcgggcgt
     9001 ggtggtggag tgctgcggcg gcccccgcat cgagcggcag ggagtcaccc tcgacttcac
     9061 cccgccgttt cagcgggtct ccttcgtgga gggagtacgg gaacgagccg ggctggacgt
     9121 gcgaactgcc ccggacgggg agatgcgcgc ggccctggtg cggaagggga tggcaccgga
     9181 cgaggccgcg gggtcctccg gcggcaagct gcaggacgaa gtcttccggc tttttctcga
     9241 gcccgacctg gtgcagccga ccttcgtgct cgattacccc aaagcgctct cgcccctggc
     9301 caaggtgcat cgggcggacc ccaatctgac cgagcggttc gagctcttcg tgcaggggag
     9361 agagctggcc aacgccttca gcgagctcaa cgaccccgat gaccagcggg cccggttcga
     9421 ggaccaggcc cggcagcgcg ccgcgggaga cgacgaagcc cagccccacg acgccgatta
     9481 catccgcgcc ctggagtacg gcatgccgcc caccgccggg ctcggcgtcg gagtcgaccg
     9541 gctgatgatg gtgctcaccg gccagccgtc gatccgggac gtgatccttt tcccggccat
     9601 gcgcccggag cagtaggcgc atgaccccgc tccggcttcc cacccgactc gagctccgtc
     9661 tcgcggcccg ctacctgcgc ggccggggcc ggctcttcgg actctcgctc aacaccgtga
     9721 tcgccgctgc cggcgtgatg atcggcgtag cggcgctgat cgtggtgctg ggcgtgatga
     9781 acgggctgcg ggacgagctc cgggaccgga tcctggtggc caatcccgac ctccggatcc
     9841 tgacctacgg gcagtcgctt cggatggatc cgtggcgggg cgcgctcgac tcggtgctga
     9901 ccgagccggg cgtggtggcc gccgcgccgg aggtgctgac ccagtccctg gcgcgcaatg
     9961 gcgccggcta catggcggtg gtgaacgtag tcggcatggc cgacaccggt tcccgcagcg
    10021 tgaccacgct gccggccgcc atcaaggagg gcgacctctc cttccgcacc acccacgaca
    10081 gcgtcgacgg cggcatcatc ctgggctatc ggctggcgaa tcggatgtcg gcctttccgg
    10141 gcgacgtcat cgagctgatc gggtacgcgt cggcccaggt gaaccgcgcg ctgggccagg
    10201 tggtgccccg attctggcgg atggaagtca ccggcgtctt cgagaccggc atgtttcagt
    10261 acgacgatgg cttcggcgtg ttgtcgatgg ccatggccca gcagctcgac ggcctgggcg
    10321 acgcggtctc gggaatccag atcaaggtcg aggatccctg gcaggcgccc gccatcggac
    10381 gccggctgga ggagcggctg gggtacccct accgcgcgct cgactggcag acccagaacg
    10441 cccagctctt ctcggcgttg cagttggaga agctgggcat gggactgatc atctgcatca
    10501 tcatgatcgt cgcggccttc aacatcgtcg gcactctgac catggtggtg gcggacaaga
    10561 cccgggagat cgggatcctg cgggccatgg ggctcaccgg ctcggccatc ggccgggtgt
    10621 tcgtgattca aggcgcgatc atcggggcgg tgggaaccgt gctgggcatg ggcctggggc
    10681 tggccctggc ctacctgatc gatcgctccg gcctcatccg gatcaacccc tccgtgtatt
    10741 tcgtggaccg gctgccggtc cacgtggagc tgatcgacgt tctgatcgtg gccgcggtga
    10801 gcctggcggt ggcgacggtg gccaccatcc atccgtcccg cgccgcggcc cggctggtgc
    10861 cggtggaggc gatccggcat gaatgagccg gtgctggagg cgaccgatct gcggaaggac
    10921 tacgtgggcg gcgacggcgc accgatccac gtgcttaccg gggtgcagct gacagtgagc
    10981 ccgggggagt tcgtcgcgat catcggcgcc agcggctccg gcaagagtac cttgctccac
    11041 ctgttaggcg cgctcgatga ccccagcgga ggcgacgtca cgctggcggg ccagcgctat
    11101 gccgagctct cgcccgccga gctggccgcc ctgcgcaacc gccagatcgg gttcgtgttc
    11161 cagttccacc acctgctgcg ggatttcacc gccctcgaga acgtgatgat gccgctgctc
    11221 atcgccggcg ccggcgcggc ggaggcgggc cggcgggccc gcgccgtgct cgaaaccatg
    11281 ggcctgggcg agcggctgct gcaccgtccg gggcagctct cgggcggcga gcaacagcgg
    11341 gtcgcggtgg cccgcgccct ggcgccggag ccggccctgc tgctggccga cgagccctcc
    11401 ggcaatctcg acccggccaa tgcggagcgg ttgcacggcc tgctcgccgg cgtctcgcgc
    11461 gaccacggcc gggccctggt ggtggtcacc cacaaccggg ccctggccga cctggccgac
    11521 cgggtgctgg cgctgcacga gggtgtgctg gcgctgccgc ggggcgacga ggtgatggcg
    11581 ccgtgaccga agagcggcag aagtgcgacg agtgcggcga gcgcgacgtg gtggtgcggg
    11641 tcacccacgt ggtggacggc gaggcgcgcg agatcaagct gtgcgagcgc tgtgccgccg
    11701 agaaaggcat ccagacctcg gccagtgtca ctcagacgcc gttaggcggc tttctcaacg
    11761 ctctctggaa gaccgccgag ccggccggga ccgaactggg accggtgggc aagtgccccg
    11821 ggtgcggcgc cagctttgcc gattttcgtg agaccgggcg gctggggtgc gccgactgct
    11881 ataaggcgtt cgaggccccg ctccggatat tgatccgccg ctatcacggc tccacccatc
    11941 accatggccg gcgccacgtc agcgccgagg tactggcctc gctgccgcag ga
//
LOCUS       DASWKS010000639        24517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2572019, whole genome shotgun sequence.
ACCESSION   DASWKS010000639 DASWKS010000000
VERSION     DASWKS010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 24517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24517
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2572019"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VGA78_18200"
     CDS             <1..256
                     /locus_tag="VGA78_18200"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895869.1"
                     /translation="SDGTVWCWGENSSGGRVGDGTLIDRTVPTPIFGGITYTHLDGGD
                     QHTCVRSSQGSALCWGVNATGQLGDGTLATSTRPAGVKQP"
     gene            518..2386
                     /locus_tag="VGA78_18205"
     CDS             518..2386
                     /locus_tag="VGA78_18205"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEX9895870.1"
                     /translation="MTTTAPANPATARQHRESVVIRFSGDSGDGMQLTGTQFTMETAL
                     AGSDLATFPDYPAEIRAPAGTTFGVSSFQIHFGSEDILTPGDALDVLVAMNPAALTVN
                     LKDLMVSGLVVLDTGAFTPRNLEKAGYGENPIGTAVLAPYRTLALDITKLTQAAVKPF
                     GVSSKEALRCRNMWCLGLMLWMYGRDHEATVTWLRQKFAKAPPIAEANIAALNAGHAY
                     GETTELSGDIQSYTVRPAELPVGTYRAVSGAEALAYGLITGVHKAGLRTLFFGSYPIT
                     PASSLLHLLTTLRHLGIVTFQAEDEIAAICAAIGASYTGALGVTSSSGPGLALKTEAL
                     GLAITTELPLVVVNSQRAGPSTGMPTKTEQSDLFQAVYGRNADSPLAVIASSTPSDCF
                     DVAVEAVRIALRHMTPVILLTDGYLANAAEPWQVPDLDAIPEFPVRQRTETADFHPFL
                     RDPETLARVWAVPGTPGLEHRIGGIEKSYTSGHISYDPDNHQRMTWARSEKVARIADD
                     IPAQEVALGEATGRVAVVGWGSTYGTIRKAVQLSRDQGMEVSHIHVRYLNPFPRNLGD
                     LLRGFERVLVPEMNNGQLVTILRSTYLLPAEGLSKVTGKPFKVSEIADAIRAALEV"
     gene            2389..3411
                     /locus_tag="VGA78_18210"
     CDS             2389..3411
                     /locus_tag="VGA78_18210"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEX9895871.1"
                     /translation="MTATLPTPNLAPKDYATDQEVRWCPGCGDYAILKAVQKTLSDLQ
                     APRDRTVFVSGIGCSSRFPYYVGTYGFHTIHGRAPAIATGVKLTNPELDVWLVTGDGD
                     GLSIGGNHMLHVLRRNVDLQILLFNNEIYGLTKGQASPTSRRGTRSPSTPRGSIDPAL
                     VPCSFALGAGARFVARSIDTLQTHLVEVLKRAHAHRGASFVEIFQNCVVYNDGVFDDF
                     TAREVAPDAQLHLTHGKPLVFGANHDKGIRLRPGTFTLEVVTLGENGVSEADLLVHDQ
                     TNRPLAMMLAGMQPPALPMALGVLYDDPAPSYEDEVHGQIALEKQTAKGGLKEAILGA
                     NTWSIG"
     gene            3444..5090
                     /locus_tag="VGA78_18215"
     CDS             3444..5090
                     /locus_tag="VGA78_18215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895872.1"
                     /translation="MTAITAIAALVSCGKPAPPLIPGPLGSLEKSFSETRSLADKIDI
                     TRAKGLQTGGFENWYRESRNDLIRQLGSVDSAGLGPEDRRALRTIREVTSSQLGPDPA
                     PAIGDRETGEVTCEYDPAQLLRQPSGAEALERRIMACYGRAAGRIPFAGSELDRLTIF
                     ARLGETGERGERERLFRALQPVWRSVNGDGSAGSPWRQLLTRRAREWRPSTLPHVERA
                     RALGVDPDSVALWLEGVLSAWRAAQPDTLLEPWDWYHYTGAADRRLSPRIPRDRLLPI
                     NRAWYRSLGADPDSLRIRYDLDPRAGKYPVAYTTFGDRPYRTTDGWWPGEPTVFATYR
                     VGGLGNLVELLHETGHGIHIGGIRTRPAFADWPDSDTFTEAVADLASLDAYEPRWQVR
                     ILGDSVRLSESIRSKYGGVVLDVAWAWFEMRMFAGPDQDPNQVWSDITSRFLQIRPHP
                     ELSWWAMRGQLISGPGYMLNYALGALLTAQLRERIAAERGSWFEGDLGWYGWVREALF
                     RYGQERPAGEVARDVLGAPIRPDALLRDLARPGRRERDRR"
     gene            complement(5152..5517)
                     /locus_tag="VGA78_18220"
     CDS             complement(5152..5517)
                     /locus_tag="VGA78_18220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895873.1"
                     /translation="MDFRTRLSLFLLTTALAQGCKTWRVETGPAPAEFVQTEHPERVQ
                     VRRTDNTTLELYNPSVAGDSLKGFPTELAIRPLVIPLTEIRAVATRHFSLGRTLLMVA
                     AVGGGLFVYDWLMSLNEGI"
     gene            5695..5889
                     /locus_tag="VGA78_18225"
     CDS             5695..5889
                     /locus_tag="VGA78_18225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895874.1"
                     /translation="MIDPILLHHWTTARPTAELFHQLSRLDPDLAIPAALPLLAARLL
                     GAAGEDDDEDTQPEAELATA"
     gene            6182..6559
                     /locus_tag="VGA78_18230"
     CDS             6182..6559
                     /locus_tag="VGA78_18230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895875.1"
                     /translation="MRVSTRFAVMGVLAFAACDDSYTDPTPQPEGPQATVFTASGNIT
                     AKVDEFRNVLGASNGGTAGEQPAGRREIGSRAASTDSRSGPTKSKGSKQSKQSKTVEA
                     GGVEGTSSTPSTPSTPSTSSEWH"
     gene            complement(6540..9317)
                     /locus_tag="VGA78_18235"
     CDS             complement(6540..9317)
                     /locus_tag="VGA78_18235"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 metallopeptidase family protein"
                     /protein_id="HEX9895876.1"
                     /translation="MPAKLIRRSGRTLLAFLLIAAPVAAQNGGLTTPQKALGFTIGDD
                     YMLATYTQLTDWWKKLDIESDRMKLVSIGKTAEGREQWMAIVTSPANHAKLDRYREIA
                     ARLARAEGLTDEQARALAREGKAVVWIDGGLHATEVLGAHQLMEHVWQMVSRSDEETM
                     RLLEDVIQLVTHANPDGMELVSSWYMRHPDQTRRSTQGLPRLYQKYIGHDNNRDFYLI
                     AQPESENMSRVMYREWYPQVMYNHHQTGPAGTVMFAPPFRDPHNHNIDPLLINGLSLV
                     GAAMHTRFAAEGKPGVVMRNGANYQTWWNGGLRTTAYFHNIIGILTETVGNPTPIEIP
                     FVPQRQISTGDIPYPIPPQRWHFRQSIDYSITANRAILDLASRYRETFLYQIYLMGKT
                     ALQKGNQDGWTTFPSRVAEVEAAVARDRKGQPPGQGQGGFGGGGVDKKYYDQYLRDPA
                     RRDPRGYIIPADQPDFPTATRFINALLKSGVDIHRATAQFTVAGKTYPSGSWVIKSAQ
                     AFRAHVLDLMEPQDYPNDIPYPGGPPRAPYDNAGYTLALQMGVQYDRVREGFDGPFAK
                     VTEPLISKTPGGMVASGGAGWMLSARYNDAITVVNRLVKAGAPVYRLTPSAGGKPAGT
                     FYIPSGGSARGIVEGMAAERGLKFEAATSAPASASMTRLKAARVGLADTYGGSMPSGW
                     IRWLLEQMEVPFEVVFVSRLDQGNLAQQFDVLVFADGAIPATDSVPAGGPGGGFGRQP
                     PPEDIPAEFRGWLGRISVSKTVPQLRAFLEAGGRVITIGSSTNLAQHLSLPVASHLVE
                     RQPDGTVKPLPREKFYVPASLLEVTVDTTAPVAWGTSTKTVVLFDESPVFRLDPGAVT
                     AGSVRPVAWFATASPLRSGWAWGQTYLEGGVAVAAAKVGKGTLYLFGPEITFRAQPHG
                     TFKFLFNAILN"
     gene            complement(9470..10798)
                     /locus_tag="VGA78_18240"
     CDS             complement(9470..10798)
                     /locus_tag="VGA78_18240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895877.1"
                     /translation="MRTYTLTSARAFRFRLGTAAIMAAVLPLSGCEDDFLEYTDPDII
                     TDANSASGAIALRNGVVQRFTQMVNGMQGPDALFIYSGLVADEWRSGDTFEQRNQADI
                     RSIPEENTFLDDVLLRLNQVRTQGRSAINSLRQFVPTPTSNVGLMFALTGFVENLAGE
                     AYCNGIPFSELADDGTPVFADPVTVDSAFRRAVASADSALKYVTGTDGPKVADLARIV
                     KGRALLNLNQPADAAAAVTTVATSFEYQVFHSSITTTNQTWALNAGARRYVVADNEGG
                     NGLPFVSAADPRVVTATPTPLSFDSQTPFVALTNFGQFDPMTVAGGIEARLIEAEAAL
                     RAGDAAGWLAKLNEARATRTDLPALADPGSEAARVDLTFYERAFWMFATGHRLGDLRR
                     LVRQYGRGAETVFPTGAFHKGGSYGSDLNIPISFDERNNPNFTGCLDRNP"
     gene            complement(10816..13890)
                     /locus_tag="VGA78_18245"
     CDS             complement(10816..13890)
                     /locus_tag="VGA78_18245"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HEX9895878.1"
                     /translation="MSNILLRALRLATFGLAAAAFPAAAQTGSITGRVTDQSNGQSLV
                     GARVQVIGTSLTGQTNADGRFRFTNVPTGQATVRVVALGYAALNKVATVAGGQETAVD
                     FALILTPFSLDEFVVTATGEQQRREVAHAISTVEVSNLAQTAPAQNFGDILAARAPSV
                     TVLPSNITGGGTRVRIRGNSSISLSNEPIYVVDGIRIWGAENSSSIGIGGTNPGRIND
                     LNPEDIEAIDIIRGPSASTLYGTDAANGVIVIKTKRGKAGRPVWNAYTEQGMVTGGSR
                     WPTAYRGWTAGSTVSNTTQCFLFQVAAGSCTQDSVSAFNLFEDPDASPNGRGHRQQYG
                     LQVGGGSDVVTYYLSGEWEDETGYLKMPEFARNQLLSTKNLTELRDDQERPNALTRTN
                     LRANLTAHLSQKLDVQISSGFVSSSQRLPQTDNNTTGLLSNGFGGPGFKTNMVSHGTG
                     LPARQNYGFRLFTPDEFFSESVTQDINRTMLSGTANLRPLTWLSVRGVSGVDFTSRED
                     SDICRRDDCVPGTFGIPFLAGFRENNRTTNWVYTGDFSGTASYSLTGNLRARTTVGTQ
                     FSKERFDRNGGFTWDLTPGATTLTAGANPEASEATTESSIWGLFVEHMFAWRDRVFVT
                     GALRTDRNNAFGQNFNRVYYPKASVSWVLSDEEFFGSPGWLNNLRLRAAYGASGRQPG
                     ANDALSFFTPSTSAVDGADTPSLIFSAQGNPDLKPERTSELELGFDASFANSRLNLEF
                     TWYNKNSLDALLFRQLPPSLGTAPGRWENIGKVKNTGVEAVLNAVVIDKPSIGWDMTI
                     GGNYGSNEVRDMGGVADIVGATTITAVGFPIQGWYLPEITFEDANGDGLIAQSEITAG
                     PRKFIGYSQPRGEVALFTGLELFNRRLRLQANLDSKFGSYQLNGNDRIRCESRRNCRE
                     AVDPTAPLWMQARATAIRTNSTYQTGFVEKIDFIRFREVSASYTVPESWPRLVGAQRA
                     TVTLGARNLGLITDYSGMDPETGYFSGTTGLQSDFQSGPPPRFFTFRLNVTF"
     gene            14145..15365
                     /locus_tag="VGA78_18250"
     CDS             14145..15365
                     /locus_tag="VGA78_18250"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectonucleotide
                     pyrophosphatase/phosphodiesterase"
                     /protein_id="HEX9895879.1"
                     /translation="MFRFGLSLLLALAACARSQPDPTTPIPPPVLVLVSLDGFRWDYI
                     ERPGAVGLREIAGRGVRARQMEATFPTKTFPNHYTIVTGLWAEHHGIVGNTMEDERLG
                     RFTIGDTVAVRESGWWGGEPIWVTAEKQSHRAAAMFWPGSEAVIGGVRPSWFMRYNNA
                     LPHDVRVRQVLEWLRLPPDSAPAFITLYFSAVDGAAHSFGVDAPQTDSAIVRVDSAVT
                     ALWRGIQQGGLSGRVNLIIVSDHGMVNTSRDRVIILDDWLEAGSYHVVDMNPVALIRP
                     VPGREADVYERLRRAPHLSVYRKAEIPARWHFRDHPRITPIVAAADEGWSISSREGFE
                     RNHNLGTGATHGYDNALESMHATFIAAGPAFATGKVVPRVRNVDLYALMAHVLGLRPA
                     TNDGSLDLIRAVLR"
     gene            complement(15437..18181)
                     /locus_tag="VGA78_18255"
     CDS             complement(15437..18181)
                     /locus_tag="VGA78_18255"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX9895880.1"
                     /translation="MSPPKPPLQFGRRSSQNSPIATKKHMLRSAILVVCGLCSMAVGA
                     QGQTAMGPSAKQAVARRLSGSISVDGRLDDAAWSAAQFFDDFQMKEPVQFAPPGDRTE
                     VAFLYDDDALYIGVRAHSRDAQAIPRDVTRRDQYGNSEHIVVSLDPYLDRRTAYSFSV
                     TAGGVRRDYFHPRDSEDFDSRDFTYDPVWEGKAAVDSSGWTTEFRIPYSQIRFTDRPA
                     QVWGLNINRWIPQRNEDLYWVVVPRDETGFASRFGRLTGIDQIQPRGQVELLPYVAAN
                     SYRRSQPDPANPFEEQWSTKGRVGADLKAGLGSSLTLNATINPDFGQVEADPAQLNLT
                     AFETIFDERRPFFTEGRQYIEGRVGNYFYSRRIGGFPRGEADGDFVDIPDNTTILGAA
                     KITGRTRSGLQVGALAALTDREYAEVYDAGSQLFDRQEVEPTSLYGVLRLQQQFGASQ
                     SVAGLSFSGMRRFFDEGTTLRDRFTTQAMAGGVDYVLRFQGGRYELSGHAGLSRAEGD
                     TAALLRIQTSSAHYFQRPDRETQRLDPTRTSLTGFTATIRGDKNAGNWLWGIQAVTES
                     PEFETNDMGRLQSSDDLELSGDVNYRMTTPGPVFRRWRLGVSGQSAWNYDLNRTNARM
                     QLFGSAQFANYVETQFELAYNPRTLSDDLTRGGPLMETGRFVVGELSFNSNFASPNGW
                     RIEAEVARGEFKNQFMEIDGSLFFRPSAKWGFSIDPSWFRHQEPRQYIATIAGGPAAT
                     FGSRYVFAAVDQSVLSVQFRLNYTFTPDLTLEAYAEPFTASGRFSQYGELPAPKRSDL
                     RQYGTDGTTITALNDRFYQISDSRFPGTFQLPNEDFNLFSLRTNAVLRWEWRRGSTLY
                     LVWQQDRSAACTRFADPRNCPTGAAPGSLSRPGFLSDTFGVPGDNFFAIKASYWIPLR
                     "
     gene            18304..19977
                     /gene="hutU"
                     /locus_tag="VGA78_18260"
     CDS             18304..19977
                     /gene="hutU"
                     /locus_tag="VGA78_18260"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEX9895881.1"
                     /translation="MTSTLHGPRIVRAPTGTTLSCKGWHQEAALRMLMNNLDPAVAER
                     PEELIVYGGGGKAARNWACYDAIVATLKRLANDETLLVQSGKPVGVFRTHEDAPRVLI
                     ANAHLVPRWATWDEFRRLDALGLTMYGQMTAGSWIYIGTQGILQGTYETFAECARQHF
                     GGSLAGRLVVTGGLGGMGGAQPLAATMNGAAFLGVDVDESRIRRRVDTGYCDRISHDL
                     DEALALVLEAKSANRPLSVGLVANIAEVLPDLVERGVAVDVVTDQTSAHDLRVGYIPI
                     GLSLDQAAVMREADPKGYEARVLDSMVQQVEAMLALQRAGSVAFDYGNNLRGQVADHR
                     AMRQAFEIPGFVPAFIRPLFCRGAGPFRWVALSGDPGDIAATDDAVLATFPRKESLGR
                     WIRQARTKVHFQGLPARICWLEYGERAEMGLKFNWLVKTGRVKAPIVIGRDHLDTGSV
                     ASPNRETEGMKDGSDAIADWPLLNAMLNTACGASWVSLHHGGGVGIGYSIHAGMVVVA
                     DGTDRAANRLERVLTADPGTGVMRHADAGYEAAIDVARSRGVDLPMLDR"
     gene            20100..21311
                     /gene="hutI"
                     /locus_tag="VGA78_18265"
     CDS             20100..21311
                     /gene="hutI"
                     /locus_tag="VGA78_18265"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HEX9895882.1"
                     /translation="MPLLRNIGLLAQCRADGSQADIHSIPRAALVWTEDRIVWVGAEA
                     DLPAQYTGWPADDAAGRLVIPGLVDCHTHLAFGGWRADEFELRILGSSYQDIAARGGG
                     IVSTVNRTRGLNPAALVLRCRDFLSGMAALGVTTVECKTGYGLDLAGELKLLQVYATL
                     ASEGPQRIVPTLLAAHTIPPEYDGHRDDYIALITDRIIPAARGLARFCDVFVEEGAFT
                     IEEARRILMAGRDAGLRPKLHADQLSRGGGAELAAELGAASADHLEHIGASGIDAMRR
                     AGVVAVSLPIASLYLRQPATPARALIEAGVLVAVATDFNPGSAPSYHLPLALTLACTL
                     QRMTPAEALKGATSIAARAIAVEDQCGSLEPGKAADFAVIDAPDVNHWLYHFRPNACV
                     RTVVAGRTIWG"
     gene            21388..23100
                     /locus_tag="VGA78_18270"
     CDS             21388..23100
                     /locus_tag="VGA78_18270"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX9895883.1"
                     /translation="MVDRRSFLAACVASGIADPVFPDALWGRLHAQAPAGGQQQAPKV
                     VTREMVAAAEKVSGLEFTEAERDLLLDNLNNTLQSYRQLRSLPLPNDIPPAIRFSPVL
                     PGRPAGGPAAKPGRRPARKVARPSSEADLAFLPLADLAELVRTRQLGAVELTRLYLER
                     LKRYDPTLLCVVNLTEARALRQAETADREIKAGRYKGPLHGIPWGAKDLLAVPGHPTT
                     WGSPIFRNQMLDATATVVERLDAAGAVLVAKLALGEFAMGDVWYGGTTKNPWNTEQGS
                     SGSSAGPGSATAAGLVGFAIGTETLGSIVSPATRNGVTGLRPTFGRVSRHGAMALSWT
                     MDKVGPMCRTAEDCALVFQVIHGTDGKDPTVIDAPYSWDPVRPLSSIRIGYLKTAFDQ
                     ERQQKALDDAALDALRALGVTPVEVEMPGNLPIGAMRIILSAEAAAAFDDLTRDNRDD
                     QMVRQVANAWPNAFRSARFIPAVEYIQANRARTILMERMEKVFEQVDVFITPSFGGNV
                     LLATNLTGHPALVLPSGFTLAGGPVSVSFIGKLFGEAELCRVAMAWQEATGWHRRRPA
                     GFVG"
     gene            complement(23214..24257)
                     /locus_tag="VGA78_18275"
     CDS             complement(23214..24257)
                     /locus_tag="VGA78_18275"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEX9895884.1"
                     /translation="MNASLSAQGFRMPAEWSPHRGTWLSWPHNAASWPGKFEPVPGLF
                     AEMVRWLAPGEEVHINVRDAAMEQDVQSLLLERGLSLGNVFFHHLPTNDAWCRDHGPV
                     FVQRDVDGRRERLILDWGYNAWGNKYPPFDLDDTIPTRIGQELGIPVLSPGIIMEGGS
                     IEVNGLGTLLTTEACLLNPNRNPALSQAEIERYLRDYLGVSQVLWLGEGIEGDDTDGH
                     VDDLTRFVDSRTVVTVLENDPADPNYRPLRDNLDRLRTMTDQDGRLLDIVTLPMPRPL
                     YHEGQRLPASYANFYIGNRVVLLPAYDPLQDELAREMLQRLFPTRQVVPIDCTDLVWG
                     LGAFHCVTQQWPA"
BASE COUNT         4101 a         7870 c         8254 g         4292 t
ORIGIN      
        1 ctccgatgga acggtctggt gctggggcga aaactccagc ggcggccggg tgggcgacgg
       61 aaccctgatc gatcgcaccg tcccgacccc catcttcggc gggattacct atacccatct
      121 tgacggcggc gaccagcaca cctgcgtccg gagcagccag ggatccgccc tctgctgggg
      181 tgtcaacgcc accggccaac tgggcgacgg gaccctggcc accagcaccc ggcccgcagg
      241 ggtcaaacaa ccgtaacaac aacaacaaca acaacaacaa acaacaacaa caacaggtag
      301 cagggagcag gtagcaggga gcagggagaa gggagcagga agaagggagc agggagcagg
      361 gagaagggag caggaagaag gtagcaggga gcaggaagca gcagctggac cgggacccct
      421 gctccccgct gcctgctccc cgctccctgc tccccactcc ctgctccccg cttcctgctc
      481 cctgctccct ggtttgttga aagcttagat ttagtgcatg accaccaccg cccccgccaa
      541 cccggcaacc gcacgccagc accgggagtc tgtcgtcatc cgcttctccg gggattccgg
      601 agacgggatg cagctcaccg gcacccaatt cacgatggag acggccctgg cgggcagcga
      661 cctggcgacg tttccggact atccggccga gatccgggca ccggccggaa ccacgttcgg
      721 agtttcgtcc tttcagatcc atttcggctc ggaagacatt ctcactcccg gcgatgcgct
      781 cgacgtgctg gtggcgatga atcccgcggc gctcacggtc aatctcaagg acctgatggt
      841 gagcgggctg gtggtgctgg atactggcgc attcaccccg cgcaacctgg agaaggccgg
      901 ctacggcgag aacccgatcg ggaccgcggt gctggcgccg taccgtaccc tggcgctcga
      961 catcaccaaa ctgacccagg ccgcagtcaa gccgttcggc gtctcgtcca aggaggcgct
     1021 tcggtgccgg aacatgtggt gcctcgggct gatgctctgg atgtacggcc gggatcacga
     1081 ggcgaccgtg acctggctca ggcagaaatt cgccaaggcc cccccgatcg ccgaggcgaa
     1141 tatcgcggcg ctcaacgcgg gccacgccta cggcgagacc accgaactgt cgggcgacat
     1201 ccagagctac accgtgcggc cggcggaact ccccgtggga acctatcgcg cggtgagtgg
     1261 cgcggaggcg ctggcgtacg gactgattac cggggtacac aaagccgggc tcaggacgct
     1321 cttcttcggc tcctatccga ttactcccgc ttcgtcgctg ctgcacctgc tgaccacgct
     1381 gcggcacctg ggcatcgtga cgttccaggc ggaagacgag atcgcggcca tctgcgcggc
     1441 gatcggcgct tcgtataccg gcgcgctggg ggtaacctcg agctcgggcc cgggtctcgc
     1501 gctcaagacc gaagcgctgg ggttggcgat caccaccgaa ctgccgctgg tggtggtgaa
     1561 cagccagcgg gccggaccct cgaccggaat gcccaccaag accgagcagt ctgatctgtt
     1621 ccaggcggtc tacggccgca acgccgacag cccgctcgcg gtgatcgcgt cgtccacgcc
     1681 gtccgactgc ttcgatgtgg cggtggaggc ggtgcggatc gcgctgcgcc acatgacgcc
     1741 ggtcatcctg ctgaccgacg gctatctggc caacgcagca gaaccgtggc aggtgcccga
     1801 tctcgacgcc attcccgagt tccccgtccg ccagcgcacc gagacggccg atttccaccc
     1861 cttcctgcgc gatccggaga ccctggcgcg ggtctgggcc gtgccgggca cgccggggct
     1921 ggagcatcgg atcggaggga tcgagaagag ctacacctcg gggcacatct cgtacgatcc
     1981 tgacaaccac cagcggatga cctgggctcg atcggaaaag gtggcgcgca tcgcggacga
     2041 tattccggct caggaggtcg ccttgggcga ggccaccggg cgcgtagccg tggtcggctg
     2101 gggttcaacc tacggaacca tccgcaaagc ggtacagctc tcccgggacc aggggatgga
     2161 ggtctcgcac attcatgtgc ggtatctcaa cccgttcccg cgcaatctgg gcgacctgct
     2221 gcggggcttc gaacgggtgc tggtacccga gatgaacaac gggcagctgg tgaccatcct
     2281 gcggagtacg tacctgctgc cggcggaagg tctgtccaag gtcaccggca agccgttcaa
     2341 agtgagtgaa attgcggacg cgattcgcgc cgcgctggag gtatgaccat gaccgccacg
     2401 ctcccgacgc ccaacctggc gcccaaggac tacgccaccg atcaggaagt ccgctggtgc
     2461 cccgggtgcg gggattacgc catcctcaag gcggtgcaga agaccctgtc cgacctgcag
     2521 gcacccaggg atcgcaccgt gttcgtgtcg ggcatcgggt gctcctcgcg tttcccttac
     2581 tacgtcggca cttatgggtt ccacaccatt cacggtcgcg cccccgccat cgccaccggg
     2641 gtcaagctca ccaacccgga gctggatgtc tggctggtga ccggtgacgg cgacggcctg
     2701 agcatcggtg gcaaccacat gctgcatgtg ctgcgccgca acgtggacct ccagatcctg
     2761 cttttcaaca acgagattta cggactgacc aagggccagg cgtcgcctac ctcgcgccgc
     2821 ggtacccgct caccgtccac gccgcgcggg tccatcgacc ccgccctggt gccgtgctcg
     2881 ttcgcgctgg gcgcgggggc ccgcttcgtg gctcgttcca tcgacacgtt gcagacccac
     2941 ctggtggaag tgctcaagcg ggcccacgcc catcgcggcg cgtcgttcgt ggagatcttt
     3001 cagaactgcg tggtctacaa cgacggggtg ttcgacgatt tcaccgccag ggaagtggcg
     3061 cctgatgccc agctgcacct gacccacgga aagccgctgg tgttcggcgc caaccacgac
     3121 aaggggatcc ggcttcgtcc cgggacattc accctggagg tggtgaccct gggcgagaac
     3181 ggcgtatcgg aggcggacct gctggtgcac gatcagacca accgtccgct cgccatgatg
     3241 ctggcgggca tgcagccgcc ggccctcccc atggccctgg gcgtactgta cgacgacccc
     3301 gcccccagtt acgaggacga agtgcatggc cagatcgccc tggagaagca gaccgcgaag
     3361 gggggcctca aggaggcgat tctgggagcg aacacctggt cgatcggatg atgccacctg
     3421 cgagatgctt cgctttgctc aggatgacag ccataacagc aatcgcggcg ctggtttcct
     3481 gcgggaagcc ggcgccgccg ctcattccgg gtccgctggg ctcgctggaa aagtccttca
     3541 gtgaaacccg atcgctggcc gacaaaatcg acatcacccg ggccaagggg ctgcagaccg
     3601 gtggattcga gaactggtat cgcgaatccc gaaatgatct gatccgccag cttggttcgg
     3661 tcgattcagc cggcttgggt ccggaagacc gccgtgccct tcggaccatt cgtgaggtca
     3721 cctcctccca gctcggtccc gatcccgccc ccgcgatcgg cgatcgggaa accggcgagg
     3781 tgacctgtga gtacgacccc gctcagctgc tgcgacaacc cagtggagcg gaggccctgg
     3841 agcggcggat catggcctgc tacggccgcg cggccggtcg tatcccgttc gccggcagcg
     3901 agctcgaccg cctgaccatc ttcgcccggc tgggggaaac cggggagcgg ggagaacggg
     3961 agaggttgtt ccgcgcgctg caaccggtct ggcgctcggt caacggagat ggatccgctg
     4021 ggagcccatg gcgccagctc ctgactcgac gtgcccggga atggcgtccc tccacccttc
     4081 cacatgtcga gcgggcccgc gcgttggggg tcgatcccga ctcggtggcc ttgtggctgg
     4141 agggcgtgct ctccgcctgg cgagccgccc agcccgacac cctgctggag ccgtgggatt
     4201 ggtaccacta caccggagcc gcggatcgcc ggctgtcgcc ccggattccc agggatcggc
     4261 tgctgccgat caaccgggcc tggtaccgtt cgttgggggc agacccggat tccctgcgga
     4321 tccgttacga ccttgatccg cgcgccggga agtatcccgt cgcgtacacc accttcggcg
     4381 accggcccta ccgcaccacg gacggctggt ggccgggtga gcccaccgtg ttcgcgacct
     4441 accgggtagg cggattgggg aatctggtcg agctattgca cgagaccgga cacgggatcc
     4501 acatcggggg catccggacc cggccggcgt tcgccgactg gcccgacagc gacaccttca
     4561 ccgaggccgt ggccgacctg gcgagcctcg acgcttacga accgcgctgg caggtgcgga
     4621 tcctgggtga ttcggttcgc ttgtccgagt cgatccggag caagtacggc ggggtggtgc
     4681 tggatgtggc ctgggcctgg ttcgagatgc ggatgttcgc cggcccggac caggacccca
     4741 accaggtctg gtcggacatc acttcccggt ttctgcagat ccggccccat ccggagcttt
     4801 cctggtgggc tatgcgggga cagctcatca gcggtccggg gtatatgctg aattacgctc
     4861 tgggtgcctt gctaaccgcc cagttacgag aacggatcgc cgccgagcgg ggcagctggt
     4921 ttgaaggaga tctgggatgg tacggctggg tccgggaggc gctgttccgc tatggccagg
     4981 aacgcccggc cggcgaggtg gcgcgcgatg tcctcggggc tccgatccgg cctgatgcac
     5041 tgttgcgaga cctagcccgt cccggtcgcc gcgagcggga ccgacgatag tcgaaggggt
     5101 tcgccttcga ccctcttcga ccatcttcga ccgtcttcgt cgacccgtag ttcagatccc
     5161 ctcgttgagt gacatcagcc agtcatagac aaacagtccg ccgccaaccg ccgccaccat
     5221 caggagggtc cggcccaggc tgaagtgccg ggtggccacg gcacggattt cggtcaacgg
     5281 gatcacgaga gggcggatgg ccagctcggt cgggaagccc ttcaggctgt cccccgccac
     5341 gctggggttg tacagctcca acgtagtgtt gtctgtcctc ctcacctgta cccgctcggg
     5401 gtgttcggtt tggacgaact ccgccggagc cgggccggtc tccacccgcc aagtcttaca
     5461 gccctgtgcc agggcggtag ttagcaggaa cagggacagg cgggtgcgga aatccatagg
     5521 gcctctcagc gcgaagggcc aaatctgggc cggtccggcc caccccgcca gttgggaggg
     5581 atcgtagtca ggacttggac ggcctggtgg aacctttctt gcacaaggga gtttgtgcag
     5641 ggagcgccgg ccattggcac cgttggggtg ccgcgagccg gctggaggta ggcaatgatc
     5701 gacccgatcc tccttcacca ctggaccaca gctcggccta cagcggagct gttccaccag
     5761 ctgtcgcggc tcgatccgga cctggccatt cccgcagccc tgccgctgct cgcggcgcgg
     5821 ttgctggggg ccgccggtga agacgacgac gaggacacgc agcccgaggc cgagctggca
     5881 accgcctgac acgcctctgg acttcgatgg gtgaacgggg ccaggcactt gcctggcccc
     5941 gattttttct cgatcgcgac ggcctaagtc ggtctgttga ccttctccgc ttgctgcgcg
     6001 ttgtgtcaat ctaccgtgtc atttcgcatc gtcccgttgc aacgacgtgt gatccatatc
     6061 actaatcgga aaccgtggtg aggcgggagg cggtcgttcg tcgtcttcga ctgcctggct
     6121 acgcaaccaa ggacaagcgg gccactgggg cccgctcatg atccttgacc cgggagagag
     6181 catgagagtg tcgacccggt tcgcagtgat gggtgtgctg gccttcgcgg cctgtgacga
     6241 cagctacacc gatcccacgc cccagcccga gggaccccag gcgacggtct tcacggcctc
     6301 cggtaacatc accgccaagg tggacgaatt ccgcaatgtg ttgggggcct ccaacggcgg
     6361 cacagccggt gagcagcctg ccggacggcg ggagatcggc agccgcgccg catcaactga
     6421 cagtcgaagc ggtcctacca agtcgaaggg gtcgaagcag tcgaagcagt cgaagacggt
     6481 cgaagccggt ggggtcgagg gaacatcttc gaccccttcg accccttcga ctccttcgac
     6541 tagttcagaa tggcattgaa caagaatttg aaggtcccat gtggttgcgc ccggaacgtt
     6601 atctcgggtc cgaacaagta cagcgtgccc ttacccacct tggctgcggc caccgctacg
     6661 ccgccttcca gataggtctg accccaggcc cacccgcttc ggagggggga ggcggttgcg
     6721 aaccaggcta ccggccggac gctccccgct gtcaccgcac cggggtccag ccggaacacc
     6781 ggactctcgt cgaacagaac cacggttttg gtgctggttc cccaggcgac cggcgctgtg
     6841 gtgtcgaccg tcacctcgag cagggaggcg ggcacgtaga atttctcgcg cggcagcggc
     6901 ttcaccgtgc cgtccggctg gcgttccacc aggtggctgg ccaccggcag gctcagatgc
     6961 tgggccaggt tggtggagct gccgatggtg atcacccgtc caccggcttc aaggaacgcc
     7021 ctgagctggg ggacggtctt ggacacgctg atcctgccga gccagccgcg gaactccgcc
     7081 gggatgtcct ccggtggtgg ctgacgtccg aatccgcccc cgggaccgcc ggccgggacc
     7141 gaatcggtgg ccggaatggc cccgtccgcg aaaaccagca catcgaactg ctgagccagg
     7201 ttcccctggt cgagccggga gacgaagacc acttcgaacg gcacctccat ctgttccagc
     7261 agccagcgga tccagcccga gggcatcgag ccgccgtaag tgtcggccag cccgacgcgg
     7321 gcggccttga gccgggtcat gctggcggag gccggggccg atgtggcggc ttcgaacttg
     7381 agtccccgct ccgcggccat cccctccacg atcccgcgag ccgagccacc cgaggggatg
     7441 tagaaggtcc cggccggctt gcccccggcc gacggggtca gccggtagac cggtgcaccc
     7501 gccttcacca gccggttcac cacggtgatt gcgtcgttgt accgggccga aagcatccat
     7561 ccggcgccgc cgctcgctac catgccgccg ggtgtcttgg agatcagcgg ctcggtcacc
     7621 ttggcgaagg ggccgtcgaa gccttcccgg acgcggtcgt attgcacccc catctgcaag
     7681 gccagcgtgt agccggcgtt gtcgtagggc gcgcggggcg gaccgccggg gtagggaatg
     7741 tcgttgggat aatcctgagg ctccatcagg tcgaggacgt gggcccggaa cgcctgggcg
     7801 ctcttgatga cccacgatcc ggacggatag gtcttgcccg ccaccgtgaa ctgggccgtg
     7861 gcgcggtgaa tgtcgacccc cgacttgagc agcgcgttga tgaaccgggt cgcggtgggg
     7921 aagtcgggct gatcggccgg gatgatgtac ccgcgcgggt cgcgcctggc cggatcgcgg
     7981 aggtactggt cgtagtactt cttgtcgacc ccgcctcctc caaagcctcc ctggccctgg
     8041 cctggcggct gtcctttccg gtcccgtgcc accgctgctt caacctccgc gacccggctg
     8101 ggaaaggtgg tccagccatc ctggtttccc ttctgaaggg cggtctttcc catcaggtag
     8161 atctgataga ggaacgtctc gcggtagcgg gacgccagat ccaggatggc gcggttggcg
     8221 gtgatggagt aatcgatcga ctgccggaaa tgccagcgct ggggtggaat cggataaggg
     8281 atgtcgccgg tggagatctg gcgctgcggg acgaacggga tctcgatggg cgtcgggttg
     8341 ccgacggttt cggtgagaat gccgatgatg ttgtgaaagt acgccgtagt ccgcagcccg
     8401 ccgttccacc aggtctggta attggcgcca ttgcgcatca ccacccccgg ctttccttcc
     8461 gcggcgaacc gggtgtgcat ggcggccccc accaggctca ggccgttgat cagcagcgga
     8521 tcgatgttgt gattgtgggg atcgcggaac ggcggggcga acatcacggt gccggccggg
     8581 ccggtctggt ggtggttgta catgacctgg gggtaccact cgcggtacat cacccggctc
     8641 atgttctccg attcgggctg tgcgatgaga tagaaatcgc gattgttgtc gtgcccgatg
     8701 tacttctggt agagccgggg caggccctgc gtggaccgac gggtctggtc cgggtgccgc
     8761 atgtaccatg aggagaccag ctccatcccg tcggggttgg cgtgcgtcac cagctgaatc
     8821 acgtcctcga gcagccgcat ggtttcctcg tcgctgcggc tgaccatctg ccagacgtgc
     8881 tccatgagct ggtgggcgcc caggacctcc gtggcgtgca gcccgccgtc gatccagacc
     8941 accgccttgc cttcccgagc cagcgcgcga gcctgttcat cggtcaggcc ctcggcccgg
     9001 gccagccggg cggcgatctc ccgatagcgg tcgagcttgg cgtggttggc cgggctggtg
     9061 acgatggcca tccattgttc ccggccttcg gcggtcttgc cgatcgagac cagcttcatt
     9121 cggtccgact cgatgtcgag cttcttccac cagtcggtca gctgggtgta ggtggcgagc
     9181 atgtagtcat cgccgatggt gaagccgagg gctttctggg gcgtggtcag gccgccgttc
     9241 tgcgcggcga ccggggcggc aatgaggagg aacgcgagga gagtccgccc ggagcggcgg
     9301 atgagtttgg ctggcatggc tggcccttgg gtctttgacc caatttacgc tcattgtcga
     9361 gcgcacgttg aggggacgtt tgaagccggt tagggcggtt aggaaaaccg aagggcggct
     9421 gatggccgga gccaccaacc gccctgcccg cctgtccgca cgaatgccgt tatggattcc
     9481 tgtccagaca gccagtgaag ttaggattgt tccgctcatc gaacgagatc gggatattca
     9541 ggtctgaccc gtagctcccg cccttgtgga acgcccccgt cgggaacacc gtttccgccc
     9601 cacggccgta ttgccgaacc aaccggcgca ggtctcccag acggtgcccg gtcgcaaaca
     9661 tccagaaggc cctttcgtag aacgtgagat ccaccctggc ggcctcactc cctgggtcag
     9721 ccagcgccgg aaggtcggtg cgagtggcac gggcctcatt gagtttggcc agccagccgg
     9781 ccgcatcgcc ggcacgaagg gcagcctccg cttcgatgag acgcgcctcg ataccgccgg
     9841 ccacggtcat cgggtcaaac tgaccaaagt tggtcaatgc gacgaatggg gtctgcgagt
     9901 cgaacgacag cggggtgggg gtggcggtca cgactcgggg atcggccgca ctgacgaagg
     9961 gcaatccgtt gcccccctcg ttgtcggcta ccacgtagcg tcgggcgccc gcattcagcg
    10021 cccaagtctg gttggtcgtg gtaatgctgc tgtggaatac ctgatactcg aagctggtcg
    10081 ccacggtggt aacggcggcc gccgcgtcgg ccggctggtt gagattgagc agcgcccggc
    10141 ctttcacgat gcgggcaaga tcggccactt tgggaccgtc ggtcccggtc acgtacttga
    10201 gagccgagtc ggccgaagcc acggctcgtc tgaatgcgct gtccaccgtg accgggtccg
    10261 cgaagaccgg ggttccgtcg tcagccagct cactgaacgg aatgccgttg cagtacgcct
    10321 cacccgccaa attctccaca aagccggtca acgcgaacat caacccaacg ttggatgtcg
    10381 gggtcggcac gaactgccgc agcgaattga tggcggaccg accctgggtc ctgacctggt
    10441 taagcctgag aagcacgtca tcgaggaatg tgttctcctc agggatggag cggatgtccg
    10501 cctggttccg ctgttcgaag gtgtcccccg agcgccattc atccgccacc agcccgctgt
    10561 aaatgaagag ggcgtcggga ccctgcatgc cgttcaccat ttgggtgaac cgctggacta
    10621 cgccgttgcg gagcgcgatc gccccggagg cggagttggc atcggtgatg atatccgggt
    10681 ctgtgtattc aaggaagtca tcctcgcagc ccgagagggg caggaccgcc gccatgatgg
    10741 cggcggtgcc caggcggaac cggaaagcac gtgcgctggt caacgtatag gtcctcatgt
    10801 gagagtctcc cgtcctcaga aggtcacgtt cagccggaac gtgaagaacc ggggcggagg
    10861 gccgctctgg aagtcgctct ggaggccggt agtgccgctg aagtacccgg tctccggatc
    10921 catgccggaa tagtcggtga tcagtccgag gttccgagcg ccgagagtga cggtggcgcg
    10981 ctgcgcgccc accagacggg gccaggactc cggaaccgtg tagctggccg aaacctcgcg
    11041 gaaccggatg aagtcgatct tttccacgaa gccggtctga taggtgctgt tcgtccggat
    11101 ggcggtagcc cgcgcctgca tccagagcgg ggcggtgggg tccaccgctt cgcggcagtt
    11161 gcgccgcgac tcgcaccgga tccggtcgtt gccgttgagc tgataggagc cgaacttcga
    11221 gtccaggttg gcctgcagcc gcagccgccg gttgaacaac tccaaaccgg tgaagagcgc
    11281 gacctcgccg cggggctggg agtagccgat gaacttgcgg ggacccgcgg tgatttcgct
    11341 ctgggcgatc aggccgtcgc cgttggcatc ctcgaaggtg atttcgggga ggtaccaccc
    11401 ctgaatgggg aagcctacgg cggtaatggt ggtggcgccg acgatgtcgg cgacgccgcc
    11461 catgtccctg acctcgttgg agccatagtt gccaccgatg gtcatgtccc agccgatgct
    11521 cggcttatcg atgacgacgg cattcagaac ggcctcgacg cccgtgttct tcacctttcc
    11581 gatgttttcc caccgacctg gcgcggtacc gagcgagggc ggcagttgcc ggaagagcag
    11641 cgcgtccaag ctgttcttgt tataccaggt gaactcgaga ttgagccggc tgttggcgaa
    11701 ggaagcgtcg aacccgagct ccagctccga ggtccgctcc ggcttgaggt cgggattgcc
    11761 ctgggccgag aagatcaggg agggcgtgtc ggctccgtcg accgctgagg tcgagggcgt
    11821 gaagaacgag agggcgtcgt tggcgcccgg ctgccggcca ctggcgccat aggcggcgcg
    11881 gaggcgcagg ttgtttagcc aaccgggcga gccgaagaac tcctcgtcgc tcaagaccca
    11941 gctgaccgag gccttggggt agtacacccg gttgaagttc tggccgaagg cgttgttccg
    12001 gtcggtccgc aacgcgccgg tcacaaagac ccggtcgcgc caggcgaaca tatgctcgac
    12061 gaagagcccc cagatcgagc tttcggttgt cgcctcactc gcctcggggt tggccccggc
    12121 agtcagcgtc gtcgcacccg gtgtcaggtc ccaggtaaac ccgccgtttc ggtcgaaccg
    12181 ctccttcgag aactgggtcc ccacggtagt acgggctcgg aggttgcccg tcagcgaata
    12241 gctggccgtg ccgctgaagt cgccggtgta gacccagttg gtggtgcggt tgttctcccg
    12301 gaatccggcg aggaacggaa tgccgaaggt cccggggacg cagtcgtccc ggcggcagat
    12361 gtcggaatct tctcgactgg tgaaatcgac accggagacc ccccgcaccg agagccaggt
    12421 caaggggcgg agattggcag tgccgctcag catcgtccgg ttgatgtcct gggtgactga
    12481 ttcggagaag aactcgtccg gagtaaagag ccggaaccca tagttctgcc gcgccggcag
    12541 gccggttccg tgtgagacca tgttggtttt gaaccccggt cccccgaagc cgttggacag
    12601 gagcccggtg gtgttgttgt cggtctgggg caggcgctgg ctactgctaa cgaagcccga
    12661 cgaaatttgc acgtccagct tctggctgag atgagcggtc agattagccc gcaggttggt
    12721 ccgagtaagg gcattgggcc gttcctggtc atcccgcagc tccgtcaggt tcttggtcga
    12781 caggagctga ttgcgggcga actcgggcat cttgagatac ccggtttcgt cctcccactc
    12841 gcccgagagg tagtaggtca ccacgtccga ccctccgcct acctgcaagc catactgctg
    12901 ccggtgtccc cgcccgttgg gcgaggcatc cgggtcctcg aacaggttga aggcactgac
    12961 cgagtcctgg gtgcacgacc cggcggcgac ctggaagagg aagcactggg tggtgttgct
    13021 caccgtcgac ccggcggtcc agccccggta agccgtgggc cagcggctgc cgccggtgac
    13081 catgccctgc tcggtatagg cgttccacac cggccggccc gccttgcctc gcttggtctt
    13141 gatgacgatc acgccgttgg cggcgtcggt cccgtacaat gtggaggccg aggggccgcg
    13201 aatgatgtcg atggcctcga tgtcctcggg gttgaggtcg ttgatccggc ccgggttggt
    13261 ccccccgatc ccgatggacg aggagttctc cgccccccag atccggattc cgtcgaccac
    13321 gtaaatcggc tcgttggaga gggagatgga gctgttgccc cggatacgga cccgggtgcc
    13381 ccctcccgtg atgttgctcg gtagcacggt gacgctcggc gctcgggcgg ccaggatatc
    13441 gccgaagttc tgggccgggg cggtttgcgc caggttcgag acctcgaccg tgctgatggc
    13501 gtgggcaact tcacgacgtt gctgttctcc cgtcgcggtc accacgaact catcgagcga
    13561 gaagggagtc aggatgaggg cgaagtcgac cgccgtttcc tggccgccgg ccacggtcgc
    13621 cactttgttg agagcggcgt accccaacgc aacaacccgc accgtcgcct gcccggtcgg
    13681 gacgttggtg aagcgaaagc ggccatcggc gttggtctga ccggtcaagg aggtcccgat
    13741 cacctgcacc cgtgcgccta ccagggactg gccgttcgac tggtcggtga ctcgtccggt
    13801 tatcgaccct gtctgcgctg cagccgggaa agcggccgcc gcgagcccga aggtcgccag
    13861 cctgagagca cggaggagaa tgttgctcat gcggtggtcc tcatgacgga agaggtgcgg
    13921 aattccgcgg cagaaaccgc ggcggacaaa catcgatatt ggaagggctc tccaatataa
    13981 gaaccgaata gcatccggtg taccactcca ggtctgtctg gttaactcat tggggcgtct
    14041 aatgttatgt aacctggccc ggtcggcgcc cgtgtcgctt ggacacaccg ggcagacaca
    14101 ccggggtcca actagtattc ccgcgcattc ccaacgagcc ccccatgttc cgattcggct
    14161 tgagtcttct gctggcactg gctgcgtgcg cccgatcgca gcccgatccg acgaccccta
    14221 tcccgcctcc ggtcctggtg ctggtctcgc tggacgggtt ccggtgggac tacatcgaac
    14281 gacccggtgc ggtgggcctc cgcgaaatcg ccgggcgggg tgtgcgggcc cggcagatgg
    14341 aggcgacttt tcccaccaag accttcccca accattacac catcgtcacc ggtctttggg
    14401 ccgagcacca cgggattgtc gggaacacga tggaggatga gcggctgggg cgattcacca
    14461 tcggcgatac ggtcgcggtg cgtgaatcgg gttggtgggg cggggagccg atctgggtca
    14521 cagcggaaaa gcaaagccac cgggccgcgg caatgttctg gcccgggtcc gaagccgtca
    14581 tcggcggggt ccggccctcc tggttcatgc ggtacaacaa cgcgttgcca cacgatgttc
    14641 gggtgcggca ggtcctggag tggcttcggc tcccccccga ctcggctccc gccttcatca
    14701 ccctgtattt cagcgcggtc gacggtgcag cgcacagttt tggcgtcgat gctcctcaaa
    14761 ccgattcggc catcgtccgg gtggacagcg ccgtcacggc cttgtggcgg ggaatccagc
    14821 agggcgggct cagcgggcgg gtgaacctga tcatcgtctc cgatcacggc atggtgaaca
    14881 ccagccgcga ccgggtgatc atcctggacg actggctcga ggccggttca tatcacgtgg
    14941 tggatatgaa tccggtggcg ctgatccggc ccgttcccgg ccgcgaggcc gacgtctacg
    15001 aaaggcttcg ccgggcgcca cacctgtcgg tgtatcggaa ggccgagatc ccggcgcggt
    15061 ggcacttccg ggatcatccc cgaattaccc caatcgtggc cgcggcggac gagggctggt
    15121 cgatcagcag ccgggagggt ttcgagcgca atcacaacct gggaacgggc gccacccacg
    15181 gctatgacaa tgcgctcgag tcgatgcacg caactttcat cgcggccggt ccggccttcg
    15241 ccactggcaa ggtggtgccg cgggtccgga acgtggacct ctacgccctg atggcccatg
    15301 tcctggggct acggcccgcc actaacgacg gcagcctcga cttgattcgg gccgtacttc
    15361 ggtaaaagac caagtcggtc tgccggtcag tcggtcgtga ggcggtccag accgactgac
    15421 caactgcccg actgtcctac cgaagaggta tccaatacga cgccttgatg gcgaagaagt
    15481 tgtcgcccgg caccccgaac gtgtcgctca ggaacccggg ccgggacaaa gaacctggtg
    15541 ccgcaccggt ggggcagttg cgcgggtcgg caaagcgggt acaggcggcc gagcggtcct
    15601 gttgccagac cagataaagg gtactgccgc ggcgccattc ccaccgcagg accgcgttgg
    15661 ttcgaagcga aaagaggttg aagtcctcgt tcggcagctg gaaggtgccg gggaaccgac
    15721 tgtcgctgat ctggtaaaac cggtcgttga gggccgtgat ggtggttccg tcggttccat
    15781 actggcggag atcgctccgt ttgggggccg gaagctcacc gtattgggaa aagcggccgc
    15841 tggcggtgaa gggttcggcg taggcctcga gcgtgagatc cggggtgaag gtgtagttga
    15901 ggcggaactg aaccgagagc acgctctggt ccaccgcggc aaagacatag cggctgccga
    15961 acgtggcggc gggcccgccg gcgatggtgg cgatgtactg gcgcggctcc tggtgccgga
    16021 accacgacgg gtcgatcgaa aaaccccact tggccgaggg gcggaagaag aggcttccgt
    16081 cgatttccat gaactggttc ttgaactctc cccgggccac ttcggcctcg atccgccagc
    16141 cgttaggact ggcgaagttg ctgttgaagc tcagctcgcc caccacaaac ctgcccgtct
    16201 ccatcagcgg gccgccccgc gtgagatcgt cgctcagcgt ccgcgggttg taggccagct
    16261 cgaactgggt ttcgacgtag ttggcgaact gggcgctccc gaacagctgc atccgggcgt
    16321 tagtccggtt caggtcgtag ttccaggctg actggccaga aacccctaac cgccagcgcc
    16381 ggaataccgg acccggagtg gtcattcggt agttaacgtc gcccgagagc tccaagtcat
    16441 ccgagctctg gagccggccc atgtcgttgg tctcgaattc aggcgattcc gtgacggcct
    16501 gaatgcccca gagccagttg ccggcgttct tgtcgccccg gatggtggcg gtgaagccgg
    16561 tgagagaggt ccgggtggga tcgagccgct gtgtttcccg atcgggccgc tggaagtaat
    16621 gcgccgagct ggtctggatc cggagcaacg cggcggtatc gccttccgcc cggctcagtc
    16681 cggcatggcc gctcagctcg taacgaccac cctggaatcg gagcacgtag tccacaccgc
    16741 ccgccatggc ctgggtggtg aaccggtcgc gcagggtggt gccttcatcg aagaaccgtc
    16801 gcatgccgga gaacgagagg ccggccaccg actgggacgc gccgaactgc tgttgcaggc
    16861 gaaggacccc gtacagactg gtgggctcca cctcctgccg gtcgaatagt tgcgaacccg
    16921 cgtcgtacac ctcggcgtac tcgcggtcgg tcagcgcggc cagggctccc acctggagcc
    16981 cgctccgggt ccgtcccgtg atcttggcag cgcccaggat ggtggtgttg tcggggatat
    17041 cgacgaaatc gccgtcggcc tcgccccggg ggaaaccccc gatgcgccgg gagtagaagt
    17101 agttcccgac ccggccttcg atgtactggc ggccttcggt aaagaagggc cgccgctcgt
    17161 cgaagatggt ctcgaaggcg gtcaggttga gctgggccgg atcggcctcg acctgcccga
    17221 aatcggggtt gatggtcgcg ttgagggtca ggctggagcc cagcccggcc ttgaggtcgg
    17281 cgcccacccg tcccttggtg ctccactgct cctcgaacgg gttggcggga tcgggctggc
    17341 tccgccggta gctgttggcg gcgacgtagg gcagcagctc cacctggcct cggggctgga
    17401 tctggtcgat gccggtgagc cggccgaaac gcgaggcaaa gccggtctca tcccgcggca
    17461 ccaccaccca atacaggtct tcgttgcgct gcggaatcca gcggttgatg ttgaggcccc
    17521 agacctgggc cgggcgatcg gtgaaccgga tctgggaata cggaatccgg aactcggtgg
    17581 tccagccgga ggaatccacc gccgctttcc cttcccatac gggatcgtag gtgaaatccc
    17641 ggctgtcgaa gtcctcgctg tcacgcggat ggaagtagtc gcgccgcact ccgcccgcgg
    17701 tgaccgagaa gctgtacgcg gtgcgccggt cgagataggg gtcgagcgag accacgatat
    17761 gctccgagtt gccatactgg tcccgccggg tgacgtcgcg ggggatggcc tgggcgtcgc
    17821 ggctgtgggc ccgcaccccg atgtagagcg cgtcgtcgtc gtagagaaag gcgacttcgg
    17881 tccggtcgcc cggcggggcg aactggaccg gctccttcat ctggaaatcg tcgaagaact
    17941 gcgccgcgct ccaggccgca tcgtccagcc ggccgtcaac cgagatggag ccggaaaggc
    18001 gccgggccac ggcctgcttg gccgacggtc ccatggcggt ctgaccttgg gcgccgacgg
    18061 ccatggaaca caaaccacac acgaccagga tggcggaacg tagcatgtgc ttcttggtgg
    18121 cgatgggtga attctggctg gacctacggc cgaattgcag gggcggtttc ggggggctca
    18181 ttgacgattg actattgaca gttgacgatt acacaccgcc gggctcgcga tgctccacgg
    18241 gctcttgggt ggcgtaattg tcaatggtca attgtcaatc gcgaattgat tgcaggggct
    18301 cgaatgacat caacgttgca tgggccgcgg atagtccgtg cccccaccgg aaccacgctc
    18361 tcctgcaagg gctggcatca ggaggccgcg ctccgaatgc tgatgaacaa cctcgatccc
    18421 gccgtggcgg agcggcccga agagctgatc gtatacggcg ggggcggaaa ggccgcgcgc
    18481 aactgggcct gctacgacgc gatcgtcgcc acgctcaagc gcctggccaa tgacgagacc
    18541 ctcctggtcc agagcgggaa gccggtgggt gtgttccgga cccatgagga tgcacctcgg
    18601 gtgctgatcg ccaacgccca cctggtgccc cgctgggcaa cctgggatga gttccgccgc
    18661 ctggatgcgt tgggactcac gatgtatggg cagatgacgg cggggtcgtg gatctatatc
    18721 ggcacccagg ggattttgca ggggacctac gagaccttcg ccgagtgcgc ccggcagcac
    18781 ttcggcggat cactggccgg ccggctggtg gtgacgggcg gactgggtgg catgggcggg
    18841 gcccagccgc tcgccgccac catgaacggt gcggccttcc tcggcgtgga cgtcgacgag
    18901 tcccggatcc ggcggcgggt ggacaccggg tactgcgacc ggatcagcca cgacctggat
    18961 gaggccctcg ccctggtgct cgaggccaag tcggccaacc ggccgctttc ggtgggcctg
    19021 gtggcgaata tcgccgaggt tctgccggac ctggtcgagc ggggtgtcgc cgtcgacgtg
    19081 gtgacggatc agacctcggc ccatgacctg cgggtcggtt atatcccgat cggtctgtcg
    19141 ctggatcaag cggcggtgat gcgcgaagcc gatcccaagg gctatgaggc ccgggtgctg
    19201 gactcgatgg tgcagcaggt cgaggccatg ctggcgctgc agcgggccgg ctcggtggcc
    19261 ttcgattacg gcaacaatct ccggggacag gtcgccgacc accgcgccat gcgccaggcg
    19321 ttcgaaatcc cgggctttgt cccggcgttc atccgtcccc tcttctgccg cggcgccgga
    19381 ccgttccgct gggtggcgct ttcgggtgat ccgggcgaca tcgcggcgac cgatgacgcg
    19441 gtgctcgcca cgttcccgcg gaaggagtcg ctgggtcggt ggatccgcca agcccggacc
    19501 aaagtgcact ttcagggtct gccggcgcgg atctgctggc tggaatacgg cgagcgggcc
    19561 gagatgggcc tcaagttcaa ctggctggtc aagaccggtc gggtgaaggc gccgatcgtc
    19621 atcggacggg accatctcga caccggctcg gtggcgtcgc ccaaccgcga aaccgagggc
    19681 atgaaggacg ggtcggacgc aatcgccgac tggcctctgc tcaacgcgat gttgaacacc
    19741 gcctgcggcg cgagctgggt gtccctgcac cacggaggtg gggtcggcat cgggtactcg
    19801 attcatgccg ggatggtcgt cgtggccgac gggaccgacc gggccgcgaa ccggttggag
    19861 cgcgtgctca cggcggaccc cggcaccggc gtcatgcgcc atgcggatgc cgggtatgag
    19921 gcagccatcg acgtcgcgcg gtcgcgaggc gtggatctac caatgctgga ccggtgagcc
    19981 cgccattgac gattgacaat tgacgattga caattgatca ccgccggcgc ttgtctcctc
    20041 acgagattgc cggctgagca atcgtcaatc gtcaatcgcc aatcgtcact gaatccctat
    20101 tgccccttct ccgcaacatc ggcctcctgg cgcaatgccg cgccgacggc tcccaggccg
    20161 acatccattc catcccccgc gccgccctgg tctggaccga ggatcggatc gtctgggtcg
    20221 gagccgaagc cgacctgccg gcgcagtaca ccggttggcc ggcggacgat gccgctggcc
    20281 ggctggtcat cccgggtctg gtcgactgtc acacccacct ggccttcggc ggctggcggg
    20341 ccgacgagtt cgagctgcgg atcctgggct cgagctacca ggacatcgcg gcccggggcg
    20401 gtggcatcgt ctcgaccgtc aaccgcaccc ggggactgaa cccggcggcg ctggtgctcc
    20461 gttgccggga tttcctgagc ggcatggccg ccctgggcgt cacgacggtc gaatgcaaga
    20521 ccgggtacgg gttggacctg gccggtgagc tcaagttgct gcaggtctat gcgaccctgg
    20581 cgagcgaagg tccccagcgc atcgtgccca ccctgctggc cgcgcatacc atcccacccg
    20641 aatacgacgg acaccgggac gactacatcg ccttgatcac cgaccggatc attcccgcgg
    20701 cccgaggact ggctcgattc tgtgatgtgt tcgtcgagga gggcgcattc acgatcgaag
    20761 aggcccgccg cattctcatg gccggccgcg acgccggact caggcccaag cttcacgccg
    20821 atcaactgag ccggggcggc ggagccgagc tggccgccga gctgggtgcc gcgtccgccg
    20881 atcacctgga gcacatcggg gcgtccggta ttgatgcgat gcggcgggcc ggcgtggttg
    20941 ccgtgagctt gccgatcgcc agcctgtacc tgcggcagcc ggccacgccg gcgcgcgccc
    21001 tgatcgaggc cggggtccta gtggcggtcg ccaccgattt caaccccggc tcggccccgt
    21061 cgtatcatct gccgctggcg ctcaccctcg cgtgcaccct gcagcggatg acgccggcgg
    21121 aggccctcaa aggcgccacc agcatcgccg cgcgcgcgat cgcggtcgag gaccagtgcg
    21181 gctctctgga gccgggcaaa gcggcggatt ttgccgtgat cgatgccccg gacgtcaacc
    21241 attggctgta ccacttccgc ccgaacgcgt gcgtgcgtac ggttgtcgcc ggtcgaacga
    21301 tttggggttg agcggatagg aaggccggtt ccgactcttc cgaccgttcc gatgtgttcc
    21361 gaccggatgg gaccgacagg agcctacatg gttgaccgcc gcagtttcct cgccgcctgc
    21421 gtcgcaagcg gcatcgccga cccggtattc cccgacgccc tctggggccg gctccacgcc
    21481 caggcccccg ccggcggcca gcagcaggct cccaaggtgg tgacccgcga gatggtggcc
    21541 gccgccgaaa aggtctcggg cctcgagttc accgaggccg agcgcgacct cctgctcgac
    21601 aacctgaaca acacgctgca gtcataccgg cagctgcgca gcctgccgct gcctaacgac
    21661 attccgccgg ccatccggtt cagtccggtg cttcccggcc gaccggccgg cgggcccgcc
    21721 gccaagccgg gtcgccggcc ggctcgcaag gtggcccgac cttcgtccga agccgacctg
    21781 gcgttcctgc ccctggccga tctcgccgag ctggtccgga cccgccagct gggcgcggtg
    21841 gagctgaccc ggctctatct cgagcgcctc aagcggtacg atcccacctt actctgtgtc
    21901 gtcaacctta ccgaagcacg ggcgctgcgg caggcggaga cggccgatcg ggagatcaag
    21961 gccggccgat acaagggtcc gctccacggg atcccctggg gcgccaagga tctgctcgcg
    22021 gtccccggac atcccaccac ctggggctcg cccatcttca ggaaccagat gctcgatgcc
    22081 acggcgacgg tggtcgagcg cctcgatgcc gccggcgcgg tgctggtggc caagctcgcg
    22141 ctgggcgaat tcgccatggg cgacgtctgg tacggcggca ccaccaagaa tccctggaat
    22201 accgagcaag gctccagcgg ttcctcggcc ggacccgggt cggccacggc ggcgggactg
    22261 gtgggatttg ccatcggaac cgagaccctc ggctcgatcg tgtcgcccgc gacccggaac
    22321 ggggtgaccg gcctgcgccc cacgttcggg cgggtcagtc gtcacggggc gatggcgctg
    22381 tcgtggacca tggacaaggt cggaccgatg tgccgtaccg cggaggattg cgccctggtc
    22441 ttccaagtca tccacggcac cgacgggaag gatcccaccg tcatcgatgc tccctattcg
    22501 tgggaccccg tccggccgct ctcgtccatc cggatcggct acctcaagac ggccttcgac
    22561 caggagcgac agcagaaggc tctggacgat gccgcgctgg atgcgctccg ggccctcggc
    22621 gtgacgccgg tcgaggtgga gatgccgggg aacctcccga tcggggccat gcggatcatc
    22681 ctgtcggccg aggccgcggc ggccttcgac gacctcaccc gcgacaaccg ggacgatcag
    22741 atggtacgcc aggtcgcgaa cgcgtggccc aatgccttcc gttcggcccg tttcattccg
    22801 gcggtggaat acatccaggc caatcgggcc cgcaccatcc tgatggagcg gatggaaaag
    22861 gtcttcgagc aggtggacgt gttcatcacg ccctccttcg gcgggaatgt gctgctggca
    22921 accaatttga cgggccaccc ggccctggtc ctgccgagcg ggttcaccct ggcgggtggg
    22981 ccggtgagcg tctcgttcat cggcaaactc ttcggcgaag ccgagctctg ccgagtggcg
    23041 atggcctggc aggaggcgac ggggtggcac aggaggaggc cggccggatt cgtgggctag
    23101 gactacattg acgattgaca attgacgatt gacaattact cgcccgtcgt tcgtttctgt
    23161 gaccagagtg ccgcggagca attgtcaatc gtcaattgtc aatcgtcaat ggctcatgcc
    23221 ggccactgct gcgtcacgca atgaaaagcc cccaggcccc acaccaggtc ggtgcagtcg
    23281 atcgggacca cctgcctagt cgggaacagc cgctgtagca tctcgcgggc gagttcatcc
    23341 tggagcgggt cgtaggccgg cagcaggacc acccggtttc caatgtagaa gttggcgtag
    23401 gaagccggga gccgctggcc ctcgtggtag agcggccgcg gcatcggcag ggtgacgatg
    23461 tccagcagcc ggccgtcctg gtcggtcatc gtgcgcaagc ggtcgaggtt gtcgcggagt
    23521 ggccggtagt tgggatcggc cgggtcgttt tccagcaccg ttaccaccgt ccgcgaatcc
    23581 acgaatcggg tcaggtcgtc cacatgcccg tcggtgtcgt cgccctcgat gccctcgcct
    23641 aaccacagga cctggctcac gccgaggtag tcccgcaggt aacgctcgat ctcggcttgg
    23701 gagagggccg gattacggtt ggggttgagc agacaggctt cggtcgtgag cagagtaccc
    23761 agcccgttca cctcgatgct tcccccttcc atgatgatgc cgggggacaa cacggggatc
    23821 cccagctcct ggccgatccg ggtcggaatg gtgtcgtcca ggtcgaaggg cgggtacttg
    23881 ttgccccacg cgttgtagcc ccaatcgagg atgagccgct cccgccgccc gtcgacgtcc
    23941 cgttgcacga agacgggacc gtgatcgcgg caccaggcgt cgttggtggg gaggtgatgg
    24001 aagaagacgt tgccgaggga gagcccccgt tccaggagca gcgactgcac gtcctgctcc
    24061 atggcggcgt cgcgcacgtt gatgtgtacc tcttcacccg gcgccagcca ccgcaccatc
    24121 tccgcgaaca ggcccggcac gggctcgaac ttccccggcc agctggctgc gttgtggggc
    24181 cagctgagcc aggtgccgcg gtggggagac cactcggcgg gcatgcggaa gccttgggcg
    24241 gacaatgagg cgttcatccg ctcattgccg attgacgatt gccgattgac gattgatgcg
    24301 gaatctttgc caccgaccga gatatttcgg ttattacttg gcggtgggct ttgtgagttt
    24361 tcggggtggc cgcactcact tcatcacggg cacgggcaat ccaggagcga gcttttgacc
    24421 tcgccatcca gacggtccac ctgggtcggc aattgccccg ctccctcgaa gccggattca
    24481 tccgttcgca actctttcga tcggccacgt ccgtcgg
//
LOCUS       DASWKS010000640         1883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3645580, whole genome shotgun sequence.
ACCESSION   DASWKS010000640 DASWKS010000000
VERSION     DASWKS010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3645580"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VGA78_18280"
     CDS             <1..218
                     /locus_tag="VGA78_18280"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX9895885.1"
                     /translation="LQIAGDLTIREVTQAVSFEATISVISESEIQGNATATISRSDFE
                     LTIPSVPRVAGVDEKLLLEFDFVARSG"
     gene            319..1002
                     /locus_tag="VGA78_18285"
     CDS             319..1002
                     /locus_tag="VGA78_18285"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX9895886.1"
                     /translation="MSKTILVVDDEPRLVTLVEAYLSQEGFKVLSAGDGRDALFLARQ
                     EKPDLIVLDVMMPEMDGYEFMRLHRKERETPIILLTAKVEADDRVLGLELGADDYVTK
                     PFRPRELVARIRAVLRRAGQTQPSAQVLRAADITLDRETHTVEVNGQFVDLTPSEFDL
                     LAALMSVPGRAYTRLELLDRIQGVAYEGYERTIDVHIKNLRAKLEPNSRNPRYVQTVY
                     GVGYRFARE"
     gene            1009..>1883
                     /locus_tag="VGA78_18290"
     CDS             1009..>1883
                     /locus_tag="VGA78_18290"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX9895887.1"
                     /translation="MRLGMKLILGFLVVGLTGVALVAVIASRATENEFGRFMFDRHAE
                     STLAQLQGYYVLHEGWDGVDVIAQAPFEVPAQAAGQYGPPTGAITQTGGKYLAPIGTI
                     TLADARGVVVLAGPGFAPGISVPSTTLAGATAIQVDSQVVGWFIPPPEGFGRNPAELS
                     FLNRTNRLLLVGALGGGSLSLLLGVLLTRTLTRPIHELTAASRAIATGDLDQNVPVRS
                     RDELGELAAAFNQMSSDLARARDLRRQMTADIAHELRTPLSIILGQIDALDDGVVPPS
                     AQAFDILREETGRLGR"
BASE COUNT          335 a          609 c          606 g          333 t
ORIGIN      
        1 ccctccagat cgcaggagat ctgacgatcc gggaggtcac ccaagcggtc agtttcgagg
       61 cgacgatcag cgtaatcagc gagagcgaga tccaagggaa cgcgaccgcc acgatctcac
      121 gttccgactt cgagctgaca atcccctccg tgccccgggt ggcgggggtc gatgaaaagt
      181 tgctgctgga attcgacttc gttgcccggt ccgggtagcg ggctcacgcg gaactcgcga
      241 gtccttcaca atatattcac aaatacttgc tacgatgggt ggggtcccac atttgaaccc
      301 tgacctgaag ggaacccggt gtccaagact atcctggttg tcgacgacga accgcgactg
      361 gttacgctgg tagaggccta cctatcccag gagggcttca aggtgctctc cgccggcgac
      421 gggcgggacg ccctcttcct ggcccgccag gagaaaccgg acctgattgt gctggatgtc
      481 atgatgcccg agatggacgg gtatgagttc atgcggcttc atcgcaagga gcgggaaacc
      541 ccgatcatcc tgctcaccgc aaaggtcgaa gccgacgacc gtgtcctcgg actggaactt
      601 ggggcagacg actatgtgac caaacccttc cggccgcgag agttggtggc ccggattcgg
      661 gccgttctgc ggcgggccgg ccagacccag cccagcgccc aggtgctgcg ggcggccgac
      721 atcaccctcg atcgggaaac ccacacggtc gaggtcaacg gtcagttcgt cgatttgacc
      781 ccctctgaat tcgatttgct ggccgctctg atgtcagtgc ccggccgggc ctacacccgg
      841 ctcgaattgt tggaccggat tcaaggagta gcctacgaag gctacgaacg gacgattgac
      901 gtgcatatca agaacctgcg ggcgaagctc gagccaaact cgcgcaaccc gcgctatgtg
      961 cagaccgtct acggggttgg ctaccgcttc gctcgcgagt gagggaccat gcggctcgga
     1021 atgaagttga tcctcgggtt tttggtcgtc ggtctgaccg gggtggccct ggtggcggtg
     1081 attgccagcc gggcgaccga gaatgagttc ggccgtttca tgttcgaccg gcatgcggag
     1141 tcgaccctcg cccaacttca gggctactac gtcctgcacg aaggttggga cggggtggac
     1201 gtgatcgccc aggccccatt cgaggtcccg gcccaggccg ccggccagta tggcccgccg
     1261 accggggcca tcacccagac cggtggaaaa tacctggccc cgatcggaac cattactctg
     1321 gccgacgctc ggggagtggt ggtgctcgcc ggcccgggct tcgccccggg gattagcgtg
     1381 ccctcgacca ccctggccgg ggccaccgcc atccaggtgg acagccaggt ggttggttgg
     1441 ttcatccccc cgccggaagg attcgggcga aatccggccg aactctcgtt cctgaaccgg
     1501 accaaccggc tgctgctcgt cggggccctc ggcggtggaa gcctatcgct tctgctgggg
     1561 gtgctgctga cccgtaccct cacccgcccg atccatgagt tgaccgcagc ctcccgagcg
     1621 atcgccaccg gcgacctgga ccagaacgtc ccggtgcgct cgcgggacga gctgggcgaa
     1681 ctggcggcgg ccttcaacca gatgagttcc gacctggccc gggcccgtga cctgcggcgc
     1741 cagatgaccg ccgacatcgc gcacgagctg cgcacccccc tgagcatcat cctggggcag
     1801 atcgatgccc tggacgacgg agtggtccct ccctctgcac aggcatttga tatcctgcgc
     1861 gaggagaccg gccggctggg ccg
//
LOCUS       DASWKS010000641        27838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3312879, whole genome shotgun sequence.
ACCESSION   DASWKS010000641 DASWKS010000000
VERSION     DASWKS010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 27838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27838
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3312879"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..819)
                     /locus_tag="VGA78_18295"
     CDS             complement(130..819)
                     /locus_tag="VGA78_18295"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX9895888.1"
                     /translation="MNAPSVQEQTPHFQDRRDAGRQLAQRLQAYRGAGTLVLGIPRGG
                     VVVAAEVAGQLGAELDIVVARKLGAPGEAELAIGAVTADGERWLNESLVQMLNVPPTY
                     LEDVTRRERAEAERRERVLRGGQPALPVKGRTVIVVDDGLATGATARAALRSVRRRGP
                     GSLLLAVPVGAHDSCRALATEADEIICPCELMELIAISIYYDEFTQVEDSEVEAIMTA
                     ARRSETVPPAR"
     gene            complement(860..1669)
                     /locus_tag="VGA78_18300"
     CDS             complement(860..1669)
                     /locus_tag="VGA78_18300"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX9895889.1"
                     /translation="MHQSLGSGLIESVIGVVERAGTLIRQKRLQGVVAEEKLHGAGPV
                     TSADRAADDSLHRELLWLAPAGWLSEERVDDHRRLHQRRVWIVDPLDGTIEFVRGLPE
                     YAVSVALVEDGDPILAVIHNPATGDFFWAERGVGAFRNARAIRVRESERLLASRTEFR
                     RGEFAPVAAAWDIKAIGSTAYKMALVAAGEAAATFSRGPKWEWDVCAGALLVEEAGGL
                     ATQAFGESLRFNAPDPRVGSILAAAPGAWERVRHQIEELEPVRGDVAPTAG"
     gene            complement(1704..2825)
                     /gene="amrS"
                     /locus_tag="VGA78_18305"
     CDS             complement(1704..2825)
                     /gene="amrS"
                     /locus_tag="VGA78_18305"
                     /inference="COORDINATES: protein motif:HMM:TIGR04337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HEX9895890.1"
                     /translation="MTAPVEARFYEALPDGRVRCTLCPHHCRMLDGTLGACGVRVNHS
                     GTLYTLVYDRVAATHLDPIEKKPLFHFLPGTMAYSFSTVGCCLRCSFCQNWGISQWPM
                     EHLPRRVAWQHPGQPAVCVEFQTLQDAVAGVPMTPERIVHSALASGASSIAYTYVEPT
                     VFFELACDTAALAKRQGLRNVFITCGYTCEPPLRELAKLMDAVNVDLKFFREESYRHI
                     SRGRLQPILDAIRLYRELGVWTEVTTLVIPGVNDSDDELLGIANFIRNISPDIPWHVS
                     RFVPAYRMLDRPSTPLETLTRACRLGRELGLRYVYSGNVPGEGGEDTACAECGATLIV
                     RHGYQVRSNRIRNGRCPTCQTRIPGVGMSGGHPGSSRMF"
     gene            complement(2822..3235)
                     /locus_tag="VGA78_18310"
     CDS             complement(2822..3235)
                     /locus_tag="VGA78_18310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895891.1"
                     /translation="MIGALIAQRRAPRSLEALNRHELTTYLEGWAEDGVLVYPGSIPG
                     VSGTHSGKATKRHVMVQNLFGFGRNVVAVEWDLEVVNRQGIQGHTSGVSVVTLRRGKV
                     VHLQDYLFDTGERFQAAWGEEGVAVHGEPAESQAR"
     gene            complement(3171..4604)
                     /locus_tag="VGA78_18315"
     CDS             complement(3171..4604)
                     /locus_tag="VGA78_18315"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX9895892.1"
                     /translation="MVRFSPCQCHLLSFEGPDGYARAGGIASRITGLANALAQRGFDT
                     HLWFVGDPDLPGEESRGRLTLHRWCQWISRYHPAGVYDGEWGKVNDYAASLPPYLVSM
                     VLTRHLLALNARAVVLAEEWHTAPAVLHLHDLLRRAGIRERVSIFWNANNTFGLEHID
                     WARLGRAATITTVSRYMRYRMWSHGVDPLVIPNGLSPEAYGPSDPRTLEAFRDHTTDR
                     VVLAKVARWDPDKRWLLAMDIVRLLKERGARPLLLARGGVEAHGADVLRHAARLGLRI
                     TERVLEPDRADSVLGAVQDTSEWDVVNLRSTLGPTARRVVFEGASAVLANSGHEPFGL
                     VGLEAMAAGGIACTGGTGEDYVVPGWNSLVVQTGNPWEFVDQYLTLQYQPQMERALRK
                     RGRWTAQRYAWGAVVERHFLRHAPVLPSRGSAEDQPDGSWRRRVPSRQPQPGGSDVRC
                     TFCGGSHDRSTHRPASGTTESGSPQPS"
     gene            complement(4702..5877)
                     /locus_tag="VGA78_18320"
     CDS             complement(4702..5877)
                     /locus_tag="VGA78_18320"
                     /inference="COORDINATES: protein motif:HMM:NF003366.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX9895893.1"
                     /translation="MRTPLTGDLEIEVVERKGLGHPDTISDALAERFSVAFTRYCADR
                     FDRILHHNVDKVLLVGGSARPAFGGGEVLAPMEAFLAGRATSQYRGEGIPVAELAVNG
                     SRAWLKEHFRALDPIRHVTVHCLTRPGSASLASLAQDDSAAPLANDTSVGVGFAPETP
                     LERAVRAVERRLNAPETKLLHPEIGEDVKVLGVRRRHRLQLTVACALIDRELANPADY
                     RHACERVAAISLETALEVSGMEVEVRVNTADVPEKGQFYLTVTGTSAEAGDDGQAGRG
                     NRANGLITPYRPMSLEAAPGKNPLNHVGKLYQVAGERIARDVVARLPDIAAAECWLVS
                     RIGDPVDRPQLVDLHVMSPKGMVPADFIDPVEDIVAGELARIPTLWREVVGPGLGVY"
     gene            complement(5889..6728)
                     /locus_tag="VGA78_18325"
     CDS             complement(5889..6728)
                     /locus_tag="VGA78_18325"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEX9895894.1"
                     /translation="MAADCVSFLHWALPQLGLAWPGFRRVRRQVCRRIGHRIQELRLP
                     DPTAYRRLLETTPDEWAVLEHCCRITISRFFRDWAVFKQLRDHILPQLAAGVAEERRH
                     LRAWSAGCASGEEPYSLAILWRLGLDLPAVGVEIVATDVDQDLLERARRALYPPSSLR
                     EVPAPWRLVAFEPERQGFRVRPEFREGVSFVQQDLRRENPSGRFDLILCRNVAFTYFD
                     DAGRRATLRRFASLLYPNGVLVIGREEALPEGEGQFRPCSGAAGIHSFVTREAEKASP
                     ACT"
     gene            complement(6746..7423)
                     /locus_tag="VGA78_18330"
     CDS             complement(6746..7423)
                     /locus_tag="VGA78_18330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895895.1"
                     /translation="MATTSRRAAPRKRGRAPGRAAASMLDRYLPHFDAVLRQRVVVPV
                     PPAQTWTLLERLDFAQLLPPVGRAIEDMRAVPDFMLRIARQALRVSPDARFLLQDAAR
                     YGFILLEGKPGRHVLLGAVGKLWKSRIELVPVGRDEFVAFDDPKYVKLLTGFLVKPFG
                     TARSNFRHETRFRATDDTARAHFQRTWEETEPYVTFFLRQVMKTVVGVAKEHRATPIP
                     PWRQPRS"
     gene            complement(7431..7868)
                     /locus_tag="VGA78_18335"
     CDS             complement(7431..7868)
                     /locus_tag="VGA78_18335"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9895896.1"
                     /translation="MSVGSICSRVVATVAKTDSVIVAARRMEEHDVGTVVVLEPDGPS
                     RALGILTDRDIVLRCVAHALNPETTPVGEVMTTPAQTADEDTPIEEALARMVSAGVRR
                     LIITAKGQGVVGILSLDDVLDLLALDARAVSRLLEQQRPQIRA"
     gene            8033..10459
                     /gene="ppsA"
                     /locus_tag="VGA78_18340"
     CDS             8033..10459
                     /gene="ppsA"
                     /locus_tag="VGA78_18340"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF005057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEX9895897.1"
                     /translation="MTREFIRWFEDLEAEDVGLVGGKNASLGEMIRTLGDKGVRVPGG
                     FALTADAYWEFVLVNGLREPIVRLLGELASGRQGLDLVGPAIGRLFDQARMPAELAQA
                     VAAAYQTLSARYGVSEADVAVRSSATAEDLPQASFAGQHESYLNVRGTEALLDACRRC
                     FASLFTERAIAYRDRQGFQHMKVALSVGVQKMVRADQAGAGVMFTIDTETGFPNIALI
                     DAGWGLGESVVKGVVTPDEYRVFKPLLDDPALVPIIEKRLGSKRSKIVYGDGSAVRTV
                     DTSEEERQRLVLTDDQIIQLARWGVDIERHYGQPMDIEWAIDGDTETIYVLQARPETV
                     ESRKLASALKTYALQERGTVLVRGSAVGEAIAAGKVFVLRNTREADRFEDGGILVTEM
                     TDPDWVPLMRRASGIVTDRGGRTSHAAIVSRELGVPAIVGTGQGTSKLPLGGQVTLSC
                     AEGSVGIVYDGRLRFTETAIDVDTVPHTRTHIMINLADPDAAFRWWRLPCHGVGLARM
                     EFIINRIIQIHPMALVRPDAVQDQEARRRIGELTAGYPDRTAYFVDHLAQGIGMIAAS
                     RYPSPVIVRMSDFKSNEYANLIGGRGFEPHEANPMLGLRGASRYYSEEYREAFALECR
                     ALRRVREVMGFTNVVIMIPFCRTLAEADRVLQLLAANGLVRGQHGLHVYMMAEIPSNV
                     FLAEEFAERFDGFSIGSNDLTQLLLGIDRDSVELAALFDERDETVKRAIKTLIERAHA
                     KGITVGICGQAPSDHPGFAEFLVGLGIDSISLNPDSVIAVCERVAAAERSRETVALST
                     RETEALTISP"
     gene            complement(10449..11903)
                     /locus_tag="VGA78_18345"
     CDS             complement(10449..11903)
                     /locus_tag="VGA78_18345"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF013319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HEX9895898.1"
                     /translation="MSSLTYEAPASRYPIVSLGPFVREIPVSARADMRVPARVFADDE
                     LWQKITTDRSLDQLVNVATLPGVVGHVFAMPDVHEGYGFPVGGVAAMRTSDGVISPGG
                     VGYDINCGVRLLTSDLEVRTVQPRIEGLVHDLSRSIPSGTGHGGALQLGDAELDQVLA
                     DGCGYLVSRGFALPEDLPTIEAGGRLVAADPGQVSSRAKRRGRDQVGSIGAGNHFVEV
                     QEVEEIFDAAAAAAFGLHRGRLTVLIHTGSRGLGHQVCTDYVHLMDQVMPHYGIVLPD
                     RQLACAPIGSPEGKAYFAAMCAAANFAWANRQMITHLVRGVFERALGPTARLRLLYDV
                     AHNMAKLEEHGTELLCVHRKGATRAFGPSHPETPAPYRTVGQPVFIPGSMGTASYVLA
                     GTDAALELSFGSACHGAGRAMSRTAAKRTQPGHLVRKALEDRGIVVRCPSNAELAEEA
                     PFAYKDVDRVVNVVHQAGLARRVARLRPLGVVKG"
     gene            complement(11884..14169)
                     /gene="ftsH"
                     /locus_tag="VGA78_18350"
     CDS             complement(11884..14169)
                     /gene="ftsH"
                     /locus_tag="VGA78_18350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX9895899.1"
                     /translation="MEQRSEIRPWRRMVVWLVLLGITMAVLQLAGSRMGQATEISYFR
                     FRTELDSNNIARVEILPDSREIRGELRRPVTIAERQVSRFRAFLPFADPAPVVWLLEE
                     KGVEIAAGRGGMSWLTILFAALPWLLIFGVWALMFRQMRAGAANALSFGRLGARTVRA
                     DRPKVTFADVAGADEAKEELKEVIEFLKDPSRFQRLGGRMPKGVLLTGPPGTGKTLLA
                     RAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFQTGKAQAPCIIFIDELDAVGRQR
                     GAGLGGGHDEREQTLNQLLVELDGFEPSDGVVLLSATNRPDVLDPALLRPGRFDRQIV
                     VDLPDIRGRELILQVHTKAVPLAEDVVLSEVARGTPGMSGADLANLVNEATLLAARRN
                     KQRVDRQDLEDAKDKVMLGVERRSLVISEEERRLTAYHEAGHALLHLLVPGLDPLHKV
                     TIVPRGRALGITSSLPEEDRHSYPRDFILGRLVVAYGGRVAEELVFGPDKVTTGAARD
                     YVQATELARRMVTEFGMSEAVGPIALREAEPAVFLGRELVQRREISERTAQTVDSEVR
                     RLASEAYQRARELLRTNLTQLHTLAGALLQRETLTGEEVTALVGPTLPAAPAPSDPAS
                     AAPPSHELLEHTGEVHLRVRGRTFAELLSEAGRALGELMLRGAPETPTGSWENISVHS
                     ADRKALLVDWLNELIYHAESSREVPTQFEMLEADETALRARVRGVSVAEPPALVKAAT
                     FHDIRVETLEGGVEADVILDV"
     gene            14293..16113
                     /locus_tag="VGA78_18355"
     CDS             14293..16113
                     /locus_tag="VGA78_18355"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEX9895900.1"
                     /translation="MELQILEEDRVTLATSTTLSENALRVLEARYLARGPDGRPIETP
                     DQLFDRVAWAVSRAEELLGTPAQALEWAEEFRGLLGSLDFLPNSPALMNAGTAVGQLS
                     ACFVLPVPDSLEGIFEAVKDMALIQRSGGGTGFSFSQLRPKGEVLASTGGEASGPVSF
                     MKVFDTATEQVKLGGRRRGANLATLRVDHPDILDFVRAKLQEDALRNFNTSVWMTDAF
                     MEAYRRGDRYDLIHPVRRTVVGRVRATEVFGTIVEAAWRNGEPGLLFGDAINRANPTP
                     QLGAIEAANPCGEVPLLPYESCNLGSLNLAHLALGERGEAVVDWERLRGLTRTATRFL
                     DDMIEVNRLPLASCDEATRRTRKLGLGVMGFAELLLRVGIPYGSRRSVRLADRLMRTI
                     SETAAETSHALAAERGVFPAWRGSVYEPEGRCRRNAACTAIAPTGTISLIAGTTAGIE
                     PLFALAYRRRHTLRGNPMTEVAPLLYECLQRHVADPEAAVSEVVEKGRLGEAEGIPRS
                     FRRLFVTALELSVDDHLAIQAAFQRHVDSSVSKTINLPGDATQHEVAYAYRRAWELGL
                     KGVTVYRYGSRASQVIELGANEEPHHYDQAAPCDPGECRV"
     gene            16204..16563
                     /locus_tag="VGA78_18360"
     CDS             16204..16563
                     /locus_tag="VGA78_18360"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX9895901.1"
                     /translation="MPRFLMVARDDNAAFASLGPAETQAVIQKYIAWSQGLRASGNLQ
                     LGEKLRDGEGRVVSRRNGKLHVTDGPFVETKEILGGFWLLEASSYDQARQMAESCPHL
                     QFGSLEIRAIEELDRSS"
     gene            complement(16560..17108)
                     /locus_tag="VGA78_18365"
     CDS             complement(16560..17108)
                     /locus_tag="VGA78_18365"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX9895902.1"
                     /translation="MGRVRDFMTQDTVVVDPELSLRNLVELLAQKHITGVPVVAGHRV
                     VGVVTMDDVVEFLASEPTVPSAEEETVEQDETEPVDRWVEGEESVSNFFVDEWADAGA
                     DVTERFEAVHGPEWDQLGEHNVEEAMSRRLLTIGPEDSIADAARKMEQEAVHRLLVMD
                     GDTLFGILTTTDVTRAVAQSQA"
     gene            complement(17138..17404)
                     /locus_tag="VGA78_18370"
     CDS             complement(17138..17404)
                     /locus_tag="VGA78_18370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895903.1"
                     /translation="MSTGVTHIPKATEAALMGKEELIRAILDVLDRTWTEVEGPGALQ
                     WLEEFFRKLDEPTLRAIGYQQGAFEPDLEPDEGESRSAGPGQTA"
     gene            17529..18761
                     /locus_tag="VGA78_18375"
     CDS             17529..18761
                     /locus_tag="VGA78_18375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX9895904.1"
                     /translation="MRGSALMDQLFRTSAGRIVAVLTRRLGPEHLDLAEDAVQDAVLR
                     ALETWPYRGQPENPAGWLMQVARNRALDRLREAAVRDRHHAALMAEWADDPPTDDDAG
                     DAELRLLLLCCHPSLPSRSRVALALKTVGGFGVGEIARAFLAQPSAVAQILVRAKRSL
                     REAEVAFDLPSDQALHDRIESALETLYLMFNEGYSATAGEQVVREDLCVAAIRLAQLL
                     AANPLTARPALLALLALMHLQGSRLRSRTDRSGDLLLLADQDRAGWDQPMIAAGLAWL
                     GRSAAGDEETIYHLEAAIAACHAVAPDVERTDWVRVLSLYDQLLQAKPTPVVRLNRAV
                     ALGRVHGPRAALAALDGLEAHPAMRRYAWFPAARAVFLEASGDREASAVALRRAMDLA
                     GTEPERRLLGERLSRLLR"
     gene            18951..19283
                     /locus_tag="VGA78_18380"
     CDS             18951..19283
                     /locus_tag="VGA78_18380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895905.1"
                     /translation="MLMLLLGLLAPADTLFAVTIRTGPAWDQAKLPSEQVHFRTHSQN
                     LMKLRQDGRLVLGGRYGDVGLILVRAADEAEARGLFAADSSIARGVFRAEFQVWRTIF
                     DGTLSPNR"
     gene            complement(19423..20958)
                     /gene="metG"
                     /locus_tag="VGA78_18385"
     CDS             complement(19423..20958)
                     /gene="metG"
                     /locus_tag="VGA78_18385"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX9895906.1"
                     /translation="MPRFYLTTAIDYSNGDPHLGHALEKVGADAIARYRRLRGDQVHF
                     LMGMDEHSQSVIQAAENGAVTPRQWVDEMAERFRRFWQRLECSNDDWIRTTEPRHQAG
                     VTALLQRIQRHHPDDLYQGEYEGLYCTGCEEFKTDAQIANGRCIEHPTLDLVPTKERN
                     WFFRLSRHGDRLLQLIRSGQYLVEPEIRRNEVLRLIEGGLQDLSISRQRMPWGIPFPG
                     DEQQTVYVWFDALINYLSATGFPEAGYERLWPADLHVIGKGITRFHCVIWPAMLLSAE
                     VALPRRVWAHGYVQWEGAKMSKTAGTAVTLDSAMGRHGVDALRYYLLREIGFEADGDF
                     TWERFDGRYNADLADGLGNLASRSLAMLERYRDGVAPPVTDGTTLDQAGAAALKAYAG
                     AMDRFDLRTGADAAWSLVSTANHYIVQTEPWALAKAKRDADLDAVLAALCRCLYRLTV
                     MSAPFMPGKALELWSALGQTGEITAESWNQLGTPPVEGVKTTKPPVLFPKPNPARTEE
                     GGG"
     gene            complement(20958..22010)
                     /gene="ricT"
                     /locus_tag="VGA78_18390"
     CDS             complement(20958..22010)
                     /gene="ricT"
                     /locus_tag="VGA78_18390"
                     /inference="COORDINATES: protein motif:HMM:NF041131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HEX9895907.1"
                     /translation="MPATVEVRFKGIRKDYFLWSDESEPLRLRDPVIVEVERGFDFGL
                     VSLVGDTAAKKCTSCSSCAVGADQPDPANAQRAVVRRASQEEIRQANELRRQEEEVRK
                     SVTEKARTHGLAMRISDAEWQWDRKKLTVYFTAEQRVDFRNLVREMAGQYRTRIELRQ
                     IGMRDEAARLGGVGRCGREYCCSTWLKDLSPVSLSLAKDQHLSLNPAQISGGCGRLLC
                     CLRYEHEFYVTSRKRFPKEGKTLRTGRGPEKVVAVDIFRERVFLRNDELGPRTVLLAD
                     LKAELEALGEPLIAAPVVDPAPPPAAGPVAVPALPAAAQKDATPAVTPRRRRRRRRNR
                     RGGPPGGSPSTDQTPS"
     gene            complement(22010..22972)
                     /locus_tag="VGA78_18395"
     CDS             complement(22010..22972)
                     /locus_tag="VGA78_18395"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEX9895908.1"
                     /translation="MANHYVLDVEKPLLDLERQIEELRKLGGDQGIDVAEEIGLLQTK
                     LDGMREEIYRNLTPMHRVLLARHPKRPYALDYLNTVFTDFIELHGDRLFRDDPAIVGG
                     WARIAGQSVMVIGHQKGRDTKENIRRNFGMPHPEGYRKALRLMRLAARFHAPIVTLVD
                     TPGAYPGLGAEERGQSEALATNILEMSALETPTIAVVIGEGGSGGALALGVADRVIMF
                     ENSVYSVISPEGCAAILWKDATQRERAAEALKLTAQDLLRLKLIDEIIPEPLGGAHQD
                     PDAAAEVLREALIRHLGELKRLRPERLVRRRVEKYAAMGTFAEV"
     gene            complement(23029..26508)
                     /gene="dnaE"
                     /locus_tag="VGA78_18400"
     CDS             complement(23029..26508)
                     /gene="dnaE"
                     /locus_tag="VGA78_18400"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004226.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX9895909.1"
                     /translation="MAFVHLHTHSEFSLLDGANRIPELVAHVKKLGMDSLAITDHGNL
                     HGAWAFYENARATGIRPILGFEAYLAFGPRQAQQKPAWAPAHYSHLVLLAKDQTGYQN
                     LIRLSSIGYKEGFYRRPRIDREVLERHSQGIVGLAACLSGEIALWLRMGRYDDARASA
                     EWFARTFAPGDFWLEIQEHGIPEEATVRDGMLRLGQELGLGVVATNDAHYLRRDDAEA
                     HDVLLAIGTGADLDDPKRFRFTGQESYVKSEAEMRALFPDLPDPISHTQLVADRCEFD
                     FEKRYYVPSFPRPAGFDTDEGLLEHLARAGAVTRYGDPLPPAIEDRLAYELGVINTAG
                     YAGYFLIVEDFISAARGRDIPVGPGRGSVAGSLVAYALRITDVDPLKFDLLFERFLNP
                     ERVSMPDIDVDFCFERRGEVIDYVRERYGRDSVGQIITFGTMKARAAVKDVARVLKIP
                     PGEADRLSKLIPSGPAYSLTIPEALQKVTELRELVKENPVYQRMAELASRIEGMSRHA
                     SVHAAGVVIAPGPLDQYVPVCTAPTKGAGAGLDGEDAIICQYDMVALEKVGMLKMDML
                     GLKTLTVIHDALESILARTGERLDLTAMEFDDPAVYAMLRKGRTAGVFQFESPLATDT
                     LRAMRCDRFDDLVASNALLRPGPLDAGMHTVFIRRKLGQEPVSYPHPSLREVLEPTYG
                     VITYQEQVMRIANVLAGFSLAEADVLRKAVGKKDAELIKKELGKFVERAVAKGVDRRK
                     AEEISAQIETFGRYGFNKSHSVAYSVLSYHTAWLKTHYPADFLAALLSSEIGDTDKVV
                     QYINEARELGLDVLPPDVNESGYKFTVVGPRRIRFGLGAVRNVGRGAIDSIIVARHTQ
                     RFESLADLVDRIDLRLVNKRVLESLVAAGACDSLEGHRAQLFVALDTVLAEASLRQQE
                     REAGQASLFGEAVPTRPTHAALPNVPPWLEADRLTREKDVLGFFISGHPLDRYRTEVE
                     LFSTRSTATLGQWSEHQVTVAAVVTAVKRQISKKTGKEYARLTLEDFHGTADALVFPD
                     SWAKLNQVIGTDRAMLLTGGFSARDRGEDVAPFVVENAQPLDDLRKSGSLAISLRWSG
                     ANGIPPEVVRSAAALCAAHPGPAPVYIEWTGPDGVLVRLKSRRHRIEPQEEVVTALRG
                     LLGPDGVTFVRAG"
     gene            26805..>27838
                     /locus_tag="VGA78_18405"
     CDS             26805..>27838
                     /locus_tag="VGA78_18405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895910.1"
                     /translation="MSGSPLRPAWLAGLTLAAACGGDDGGSPPAGGANCSSPTSVQLA
                     VGQHQVVNPATANGCIRLPAASGAEAEYVFALVSGAGTVTDAGVSGGYSVRVGPEGSF
                     AASPAAGAPASALAQGRGAGVAEAFHRGLRERERQLAADPRNRPSIPRSPPAGTPPPE
                     PGSERKFAVCKTTDCNTFDTVTAVARSVGSKVAVYLDNTVPTADSLTQADLDDLKRLF
                     DLYHYPIDNNAFGTESDLDINGVTIILLTDAVNALTPDCSQGRILGYFFGGDLLNITG
                     SNHGEVFYAMVPVPATPTCTAATRVQTLVRLKPTLIHEFQHMISFNQHVLVRGGNVEE
                     TWLNEGLSHFA"
BASE COUNT         4586 a         9444 c         9038 g         4770 t
ORIGIN      
        1 gaggaacacc caggccatgt gggtttcgat caactcgacc gcggcgaggc cgggtccgta
       61 actgccgggc cgccggagga aggcaacctt ggctcggccg ctcggaaggc tgatgcgacc
      121 tgacacgaac tacctcgccg ggggcaccgt ctcgctgcgc cgagccgcgg tcataatggc
      181 ctcgacctcc gagtcctcca cttgagtgaa ttcgtcgtag tagatgctga tagcgatcag
      241 ttccatcagc tcgcaggggc aaatgatctc gtcggcctcg gtggccagag cccggcagga
      301 atcgtgagcc ccgaccggaa cggccaggag cagggacccg gggccgcgtc gccgcactga
      361 gcgcagggcg gcgcgcgccg tcgcgccggt cgccaagccg tcgtcgacca cgatgacggt
      421 tcgccccttc accggaagag caggttgccc cccccgaagc acccgctcgc gacgctcggc
      481 ctcggcccgc tcccgccggg taacgtcctc caagtaagta ggcgggacgt tcagcatctg
      541 gaccaggctc tcgttgagcc agcgttcgcc gtcggccgtg acggcgccga tcgccagctc
      601 tgcttctcca ggggcgccca gctttcgcgc caccacgatg tcgagctccg ccccgagctg
      661 cccggcaact tcggcggcga ccaccacgcc accccgtggg atgcccagga ccagcgtccc
      721 cgcacctcgg tacgcctgaa gccgctgggc aagttgccgc ccggcgtcgc gccgatcctg
      781 gaagtgcgga gtctgctcct gtactgacgg tgcattcatg agaggtaaag tcacaccggc
      841 cccatgaaga gaccgtgaat catccggcgg tgggggcaac atctccgcgg accggttcca
      901 gctcctcgat ctgatgccgg actcgttccc acgctcccgg cgccgccgcc aggatgctcc
      961 ccaccctggg atcgggggcg ttgaagcgca ggctttcacc gaaggcctgg gtggcgagcc
     1021 cgccggcttc ctccaccagg agggcgccgg cacacacatc ccactcccac tttggtcccc
     1081 gggagaacgt ggcggcagcc tcccctgcgg ccaccagcgc catcttgtag gccgtgctcc
     1141 caatcgcctt gatgtcccag gccgccgcca ccggagcgaa ctctcctcgc ctgaactcgg
     1201 tgcgagaggc gagcagccgc tcgctctccc ggacccgaat cgcccgggca ttgcggaagg
     1261 ctccgacccc ccgctccgcc cagaagaagt cgccggtggc cgggttgtgg atcacggcca
     1321 ggatgggatc gccgtcttcc accaacgcca cggagactgc gtattccggc aaacctcgga
     1381 cgaactcgat ggtgccgtcc agtggatcca cgatccagac ccggcgctgg tgcaacctgc
     1441 ggtgatcatc gacgcgttcc tccgacaacc agccggccgg cgcgagccac aggagctcgc
     1501 ggtggaggga atcgtccgcc gcccggtccg ccgaggttac cgggccggcg ccgtggagct
     1561 tctcttccgc tacgaccccc tgcagccgtt tctgtcggat cagggtgccg gcccgctcca
     1621 ctacgccgat gaccgactcg atcagtcccg atcccaaact ctggtgcacc ggctgcctcc
     1681 cgagcgacct gggttgcttc tccctagaac atccggctcg atccggggtg acccccgctc
     1741 attcccacgc cgggtatccg ggtctggcac gtcggacagc ggccgttccg gatccggttg
     1801 gaccgaacct ggtacccgtg gcgcacgatc agcgtggctc cgcattcggc acaagcggta
     1861 tcctctccgc cctcccccgg cacgttgccg ctgtagacat accgaagtcc gagttcccgg
     1921 ccgagccggc aggcacgagt caacgtctcg agtggtgttg acggacgatc cagcatccgg
     1981 taggccggaa cgaacctcga gacgtgccag gggatgtcgg ggctgatgtt ccggatgaag
     2041 ttggcgatcc cgagcagttc atcgtccgag tcgttcacgc ccggaatgac cagcgtcgtg
     2101 acctcggtcc acaccccgag ctcccggtag agccggatgg cgtcgaggat cggctggagc
     2161 cggccgcggc tgatgtgacg gtaactctct tcccggaaga acttgagatc gacgttcact
     2221 gcgtccatca gcttcgccag ttctcggagc ggtggctcgc aggtgtagcc acacgtgatg
     2281 aagacatttc ggagcccctg ccgtttcgcg agggccgccg tgtcgcacgc cagctcgaag
     2341 aacacggtcg gctcgacgta cgtgtacgcg atcgagctcg cgccggaggc cagcgcgctg
     2401 tggacgatcc gctccggggt catggggaca ccggccaccg cgtcctgaag ggtctgaaac
     2461 tcgacgcaca ccgccggttg gcccgggtgc tgccacgcta cccggcgggg caggtgttcc
     2521 atcggccact gcgagattcc ccagttctgg caaaaggagc accggaggca acagcccaca
     2581 gtcgaaaagg aatacgccat cgtgccgggg aggaaatgga acagcggctt cttttcgatc
     2641 ggatccagat gggtcgccgc gacacgatcg tacaccagcg tgtacagggt tccgctgtgg
     2701 ttgacccgga ccccgcaggc tccgagcgtt ccgtccagca tgcgacaatg gtgcggacag
     2761 agggtgcagc ggacccgccc gtccgggagg gcttcgtaga atcgggcttc gacgggagcc
     2821 gtcaccgggc ctggctctcg gccggttcgc cgtgcaccgc gacgccttct tcgccccaag
     2881 ccgcctggaa gcgttcaccg gtatcgaaga gatagtcctg gaggtgaacc actttgcccc
     2941 ggcgcagagt gaccacactg acgccactgg tatggccttg gatcccctgg cgattcacca
     3001 cctccaggtc ccattcaacc gcgaccacat tgcgcccgaa cccaaacagg ttctgcacca
     3061 tcacgtgccg cttcgtagcc ttgccggagt gcgtgccgct gactccggga atggagcccg
     3121 ggtagaccag aacgccgtcc tcagcccacc cctcgaggta ggtcgtcagt tcatgacggt
     3181 tgagggcttc cagactccgt ggtgcccgac gctgggcgat gagtgctccg atcatgacta
     3241 cctccgcaaa aagtgcagcg tacgtccgaa ccgccgggct gcggctgacg ggagggcacc
     3301 cgccggcgcc acgagccgtc aggctgatct tccgcgctcc cccttgaggg caggaccggg
     3361 gcgtggcgca ggaaatgccg ttcgaccacc gccccccacg cgtagcgctg ggcggtccac
     3421 cggccacgct tccggagcgc tcgttccatc tgtggctggt attgcagagt caggtactgg
     3481 tcgacgaact cccatggatt gccggtctgt accaccagcg aattccagcc cggtaccacg
     3541 tagtcctcgc cggtcccgcc ggtgcatgcg atgcctccgg ctgccatggc ctccaatccg
     3601 accaggccga agggctcgtg gccactgtta gcgagaacgg ccgaagctcc ttcgaacact
     3661 accctgcggg cagttgggcc gagggtagac cgcaggttga ccacatccca ctcgctggtg
     3721 tcctggaccg ctcccagcac cgagtcggcc cggtcaggct ccagcacccg ttccgtgatc
     3781 ctgagtccca gcctcgcggc gtgtcgcagc acgtcggcac cgtgcgcctc gactccgccc
     3841 cgtgccagca gcaaaggccg cgcaccgcgc tccttcagca accgcacgat gtccatggcc
     3901 aggagccagc gtttgtcagg atcccaccgg gcgaccttcg cgagcaccac gcgatccgtg
     3961 gtgtgatccc ggaatgcctc gagcgtgcgc gggtccgagg gtccataggc ttcgggcgaa
     4021 agcccattgg gaatcaccag gggatcgacg ccgtgggacc acatgcgata gcgcatgtag
     4081 cggctgaccg tcgtgatggt ggccgcgcgt cccagccggg cccagtcgat gtgctccagc
     4141 ccgaaggtgt tgttggcatt ccagaagatc gagacccgct cccggattcc cgccctccgg
     4201 agaaggtcgt ggagatggag caccgcgggc gcagtgtgcc actcttcggc caggactacg
     4261 gctcgggcat tcagcgccag gaggtgccga gttaggacca tggaaaccag gtaaggcggc
     4321 agtgaggcgg cgtagtcgtt caccttgccc cattcgccgt cgtacacgcc cgcggggtga
     4381 taccggctga tccactggca ccagcggtgc agtgtgagtc gtccgcgcga ctcctctccg
     4441 gggagatccg gatctcccac gaaccagaga tgggtgtcga atccgcgctg tgccagcgcg
     4501 tttgcgagtc ccgtgatccg gctcgcgatg ccaccggcac gcgcgtagcc atccggccct
     4561 tcgaagctga gcaggtgaca ctgacaggga gagaagcgta ccactggttg ctcgcgcgga
     4621 tcgcccacca ttaatacgac ctcgcttccc aagaaacgat gaggtttcga tgaaccggtt
     4681 tgggtctcat cgactttcgt ctcagtacac ccccagtccc ggtccaacga cctcacgcca
     4741 gagggtggga attcgagcca gctcgcctgc tacgatgtcc tcgaccggat cgatgaaatc
     4801 cgccggcacc atccctttcg gcgacatcac gtggagatcc accagctgcg gtcggtccac
     4861 cgggtccccg atccggctca cgagccagca ctccgccgcc gcgatgtccg gcaggcgagc
     4921 cactacatcc cgtgcgattc gctccccagc gacctgatac agtttcccga cgtgattcag
     4981 cgggttcttt cccggcgccg cttcgagcga catgggacga tagggcgtga tcaggccgtt
     5041 ggcgcggttg ccacgaccgg cctgaccgtc gtcacccgct tccgccgagg tccctgtgac
     5101 ggtcaaatag aactgccctt tctccggcac atcggcggtg ttcactcgca cctccacctc
     5161 catcccgctg acctcgagcg cggtttccag gctgatggcc gcgacgcgtt cgcacgcgtg
     5221 ccggtaatct gccgggttcg ccagctctcg atcgatgagg gcacaggcca ccgtcagctg
     5281 gaggcgatgc cgccgccgta cgccgaggac tttgacgtct tcgccgatct ccggatgaag
     5341 caatttggtt tcgggggcgt tcagacgccg ctccactgcc cgaaccgcgc gctccagcgg
     5401 cgtctcggga gcaaacccga cccccaccga ggtgtcgttc gccagcggtg cagctgaatc
     5461 gtcctgggcc agtgaggcga gagaggccga ccccgggcgc gtgagacagt gcacggtcac
     5521 gtgccgaatc ggatcgaggg cccggaagtg ctccttgagc cacgcccggg aaccgttcac
     5581 ggcgagctcg gcgacaggaa tcccctcccc ccgatactgg ctcgtcgcgc ggccagccag
     5641 gaacgcttcc atcggggcca gcacttcgcc gccaccgaag gctggacgcg ccgagccacc
     5701 caccagcagc actttatcga cgttgtgatg gagaattcgg tcgaaccggt ccgcgcagta
     5761 gcgcgtgaag gcaacggaga agcgctcggc caacgcatcg gatatggtgt cgggatggcc
     5821 aagccccttg cgttcgacga cctcgatctc cagatcgccg gtcagcggtg tgcgcatcgg
     5881 gccaagggtc aggtgcacgc cgggctcgct ttctcggctt cgcgtgtcac gaaggagtgg
     5941 atgcccgcag cacctgaaca cggtctgaac tgcccttctc cctccggcag cgcttcttcc
     6001 cgtccgatca ccagaacgcc gttcgggtaa aggagcgagg caaaccgccg gagagtcgca
     6061 cggcgcccgg catcgtcgaa ataggtgaat gcgacattgc ggcacaggat gaggtcgaac
     6121 cggccggacg ggttttcgcg gcggaggtcc tgctgcacga agctgacacc ttcgcgaaac
     6181 tccggccgga cccgaaagcc ctgacgctcg ggctcgaacg ccaccagccg ccatggcgcc
     6241 ggcacctctc gcaaactgct tggcgggtag agcgcccggc gggcccgttc cagaagatcc
     6301 tgatcgacat cggtggctac gatctcgaca ccgaccgccg gcaggtcgag ccccagtcgc
     6361 cacaggatcg cgagtgaata aggctcctca ccggaggcgc accccgcgct ccaggcccgg
     6421 aggtgccgtc tctcctccgc cacaccggct gccagttgtg gcaggatgtg gtccctcagc
     6481 tgtttgaaga ccgcccagtc acggaagaac cgggaaatcg tgatccggca gcaatgctcg
     6541 agtaccgccc attcgtccgg cgtcgtttcg agcagccgtc ggtatgccgt cggatcaggc
     6601 agccggagct cctgaatccg atggccgatc cgtcggcaca cctggcgccg gacccggcga
     6661 aaccctggcc aggcgagacc caactggggg agagcccagt gcaggaacga cacacagtct
     6721 gctgccatga gaccgagtca tccgatcagg agcgtggttg ccgccatggc gggatcggcg
     6781 tggcccggtg ctccttggcc acaccgacca cggtcttcat gacctgccgc agaaaaaacg
     6841 tcacgtaggg ctcggtctcc tcccaggttc gctggaaatg ggcacgggcc gtgtcgtccg
     6901 tcgctctgaa cctggtctca tgcctgaagt tggagcgggc cgtcccgaac ggcttcacca
     6961 ggaaacccgt cagcagcttc acgtacttcg gatcgtcgaa cgccacgaac tcgtcgcgac
     7021 ccaccgggac cagctcgatc cgcgatttcc acagtttccc gaccgctccc agcagcacgt
     7081 gccggcccgg tttcccctcc aaaagaatga acccgtagcg cgcggcgtcc tggagcagga
     7141 aacgcgcgtc cggcgagacc cgaagagcct ggcgggcgat ccggagcatg aaatccggca
     7201 ccgcccgcat gtcttctatc gcccgcccca ccggtgggag gagctgggca aagtccaggc
     7261 gttcgaggag cgtccaggtc tgcgccggtg gaaccggaac gacgacccgc tgtcgcagaa
     7321 cggcgtcgaa atgcggaagg tagcggtcga gcatcgacgc ggcggcccgg ccgggagcgc
     7381 gaccccgttt gcgaggtgct gctcggcgcg acgtggttgc catgttgccc tcaggcgcgg
     7441 atttgaggac gctgctgctc cagcagacgg ctcaccgccc gcgcgtccag ggccagcagg
     7501 tccaggacat cgtcgaggct gagaatcccg actacacctt gccctttggc tgtgatgatc
     7561 aagcgtctca cccccgcgct caccattcgg gccagcgctt cttcgattgg cgtgtcttcg
     7621 tccgccgttt gcgccggggt ggtcatcacc tctccgaccg gcgtcgtctc ggggttcagg
     7681 gcatgggcga cacaacgcaa cacgatgtcc cgatccgtga ggatgcccag ggcccggctc
     7741 ggaccgtccg gctccaggac taccaccgtg cccacgtcgt gctcctccat acgccgcgcc
     7801 gcaacgatta cgctgtccgt ctttgcgacc gtggcgacga ctcgactgca gatgctgccg
     7861 actgacatgc gacctcctcg gaaaccggca ccctccaaca tgtcccgacc gtcctgtcgg
     7921 tgacgtgaat ctcccgtgaa acctcgttga aaacgaggac gtcatctccg gttcagccat
     7981 tcttcacagc ttactccgga tcttgctgga agcagcaact gtgaggtgat gcgtgacccg
     8041 ggaattcatt cgctggttcg aggacctgga ggcggaagac gtcggactgg tcggcggcaa
     8101 gaatgcgtcg ctgggagaga tgatcaggac gctgggagac aaaggcgttc gggttccggg
     8161 cggttttgcg ctcaccgctg acgcctactg ggagtttgtg ctggtcaacg ggctgcggga
     8221 gcccatcgtc cggctgctgg gtgagcttgc ctccggcagg caggggctgg acctggtggg
     8281 cccggctatt gggcggctct tcgaccaagc ccgcatgccg gcggagctgg cgcaggccgt
     8341 cgccgcggca tatcaaacgc tgtcagcgcg gtatggggtg agtgaggccg atgtcgcggt
     8401 gcgaagcagc gccaccgccg aagacctccc gcaggccagc tttgcgggtc agcatgagag
     8461 ttacctgaac gtccgcggga ccgaagcatt gctcgacgcc tgccgccgct gcttcgcatc
     8521 gttgttcacc gagcgagcca tcgcctaccg cgaccggcag ggcttccagc atatgaaggt
     8581 cgccctttcg gttggggtcc agaagatggt gagagcggac caggccggag cgggagtgat
     8641 gttcaccatt gataccgaga ccggctttcc caatatcgcc ctgatcgacg cggggtgggg
     8701 cctcggcgag agcgtcgtca agggtgtcgt aacccccgat gagtaccggg tcttcaaacc
     8761 gctactggac gaccccgctc tggtgcccat catcgaaaag cgactcggtt ccaagcgcag
     8821 caagattgtg tacggcgacg ggtccgcggt ccgaaccgtg gacacgtccg aggaggaacg
     8881 gcagcgcctt gtcctgaccg acgaccagat catccagctt gcccggtggg gcgtggacat
     8941 cgaaaggcat tacggtcagc cgatggacat cgagtgggcc atcgacggcg acacggaaac
     9001 catttacgtc cttcaggcca gaccggaaac cgtcgaatcc cgcaaactcg catcggccct
     9061 gaagacctat gcgctccagg aacgcgggac ggtgctggtg aggggatccg cggttggcga
     9121 ggcgatcgcc gccggcaagg tattcgtgct gcggaatacc cgcgaggccg accggttcga
     9181 ggatggtggg attctggtca cggagatgac cgatcccgat tgggtgccgc tcatgcggcg
     9241 cgcttcgggc atcgttaccg atcggggtgg gcggaccagc cacgcggcca tcgtcagccg
     9301 cgaactcggc gtgcccgcca ttgtggggac ggggcagggg accagcaagt tgccccttgg
     9361 cgggcaagtg accctgtctt gtgcggaggg atccgtggga atcgtgtacg acggacgcct
     9421 gcggttcacc gagaccgcaa tagatgtcga cactgtcccg catacccgca ctcacatcat
     9481 gatcaacctc gccgatccgg atgccgcctt ccggtggtgg cgtctcccct gtcacggcgt
     9541 gggtctggct cgcatggagt tcatcattaa ccggatcatt cagatccatc cgatggcgct
     9601 ggtccgcccc gatgccgtgc aggaccagga ggcccgtcgg cgtatcggag agctgacggc
     9661 gggctatccc gaccgcaccg cctatttcgt ggatcacctg gcgcagggca tcgggatgat
     9721 cgctgcctcg cggtacccca gccccgtgat cgtccggatg agcgatttca agtcgaacga
     9781 gtatgcgaac ctgattggag gacggggatt cgagccccac gaagccaacc cgatgctggg
     9841 gttgcgggga gcctcccgct attacagcga ggagtatcgc gaggcctttg cgctggagtg
     9901 tcgggccctc cggagggtcc gtgaagtgat ggggttcacc aacgtcgtca tcatgattcc
     9961 attctgtcgc acgctggccg aggccgatcg ggtgctgcag ctgttggcgg ccaacggtct
    10021 ggtacggggg cagcatggat tgcatgtgta catgatggcc gagatcccca gcaacgtatt
    10081 cctggcggag gagttcgccg aacgcttcga cggtttctca atcggcagca acgacctgac
    10141 ccagcttctc ctcggcatcg accgtgactc ggtggagctg gccgcgctct tcgacgaacg
    10201 ggacgagacc gtgaagcgcg ccatcaaaac gttgatcgaa cgggctcacg ccaaaggcat
    10261 taccgtgggg atctgcggtc aggcacccag cgaccatccc ggattcgccg agttcctggt
    10321 gggattggga atcgactcca tttcgctgaa tcccgacagc gtgatcgcgg tctgcgagcg
    10381 ggtggccgcg gcggagcgtt cccgggaaac cgtggctcta tcgaccagag agaccgaggc
    10441 gctgacgatc agcccttgac gacgcccagc ggccgtaacc gcgccacccg gcgcgccagg
    10501 cccgcctggt ggaccacatt taccacccgg tccacgtcct tgtaggcaaa gggcgcttct
    10561 tccgccagct ccgcgttgga cggacagcgt accacgatcc cccggtcctc gagtgccttg
    10621 cgaaccaggt gcccgggttg ggtccgtttg gccgccgtcc ggctcatcgc gcggccggct
    10681 ccatggcagg cacttccgaa actcagctcg agggccgcgt cggtaccggc cagcacatac
    10741 gaggccgttc ccatgctgcc ggggatgaac accggctgtc ccaccgtgcg gtacggagcc
    10801 ggcgtctcgg ggtgagaggg gccgaaggcc cgggtcgctc ccttgcggtg gacgcacaac
    10861 agctcggtgc cgtgctcctc cagcttggcc atgttgtggg ccacatcgta gagcaaccga
    10921 agacgcgcgg tcggtcccag ggcgcgctcg aagacccccc gcacgagatg ggtgatcatc
    10981 tgccggttgg cccaggcgaa attggccgcc gcgcacatcg ccgcgaagta ggccttgcct
    11041 tccggcgagc cgatcggggc acaggccagc tgccggtcgg gaaggacgat gccgtagtgc
    11101 ggcatcacct gatccatcag gtgcacgtaa tcggtgcata cctgatgtcc cagcccccgg
    11161 gagccggtgt gaatcaggac cgtaagccgg ccccgatgca gcccgaaagc cgccgccgcc
    11221 gccgcatcga agatctcctc gacctcctgg acctcgacga agtggtttcc cgcgccgatg
    11281 gatccgacct ggtcccggcc gcgacgcttg gcccgtgacg agacctgacc cgggtcggcc
    11341 gctaccagcc ggccgcccgc ttcgatcgtc gggagatcct ccggcagggc aaagccacga
    11401 ctgaccaggt atccacaccc atccgccagc acctggtcca actcggcatc cccgagttgc
    11461 agggcgccgc cgtggccggt tcccgacgga atgctccggc tcaggtcgtg aaccagccct
    11521 tcgatccggg gctgaacggt cctgacttcg agatcggagg tcaggagccg tacgccgcag
    11581 ttgatgtcgt atcccacgcc gccgggagag atgacaccat ccgaggttcg catcgcggcc
    11641 acgccgccaa ccgggaatcc gtacccttca tgcacatcgg gcatggcgaa cacatggccg
    11701 accacacccg gcagggtggc gacgttgacc agctgatcca gggatcggtc ggtggtgatc
    11761 ttctgccaca gctcatcgtc agcgaaaacc cgggcgggca cccgcatgtc cgcccgagca
    11821 ctcaccggga tctcgcgtac gaacggaccg agcgaaacga tcggataccg gctggcaggg
    11881 gcttcatacg tcaaggatga catcggcctc aactcctcct tccagggtct ccacccggat
    11941 atcgtggaag gtcgcggcct tcaccaacgc cggcggttcc gccacggata cgccccgcac
    12001 ccgggcccgg agagccgttt catcggcctc cagcatttcg aactgggttg ggacttctcg
    12061 gctgctctcg gcgtgataga tcagctcgtt tagccagtcg accagcagcg ccttccggtc
    12121 ggccgagtgg accgagatgt tctcccacga tcccgtcggc gtctccggag ccccgcgcaa
    12181 catcagttcc cccagggccc gtccggcttc tgacagcagt tccgcgaagg tcctgcctcg
    12241 aactcgcagg tggacctcgc cagtgtgctc gaggagctcg tgggagggag gtgccgcgct
    12301 cgccggatcc gatggggccg gtgccgcagg taaggttggt cccaccagcg ccgtcacttc
    12361 ctcgccggtg agggtttcac gctgcagcag ggctccggcc agggtatgaa gttgggtcag
    12421 attagtccgc agcagctccc gggcgcgctg gtaggcttcg gaggccagcc ggcgaacctc
    12481 cgagtctacc gtttgggcag tgcgctcgga gatttcccgc cgctgaacca gctcacgccc
    12541 gaggaacacc gccggttctg cttcacgcag ggcgatcggc cccaccgcct cgctcatccc
    12601 gaattcggtc accatgcggc gcgccagctc ggtcgcctgc acgtagtcgc gtgccgctcc
    12661 cgtcgtcacc ttgtccggtc cgaagacgag ctcctccgca acccgaccac cgtaggcgac
    12721 aaccagccgt cccagaatga agtctcgggg gtaactgtgg cggtcctcct caggaaggga
    12781 cgaggtaatg cccagggccc ggccgcgagg gacgatggtc actttgtgga ggggatcgag
    12841 gcccgggacc agcaggtgga gtaatgcatg gcccgcttcg tgatacgcgg tgagccggcg
    12901 ctcctcttcg ctgatcacca gactgcggcg ttccaccccc agcatgacct tgtccttcgc
    12961 gtcctccagg tcctgccggt ccacccgttg cttgttccgc cgcgccgcaa gcagggtcgc
    13021 ctcgttcacg aggttggcga gatcggcccc cgacatgccg ggcgtgcccc gcgccacctc
    13081 cgacagcacc acgtcctcgg ctaacgggac ggctttggta tggacctgga ggatcagctc
    13141 ccggccgcgt atgtccggca gatccaccac gatctgccgg tcgaaccgcc ccgggcgcag
    13201 gagtgccggg tcgagcacat cgggccggtt ggtggccgag agcagcacca cgccgtcgga
    13261 gggctcgaac ccatcgagct ccaccagtaa ttggttgagc gtttgttccc gctcgtcgtg
    13321 gcctccaccc agaccggccc cgcgctgtcg ccctacagcg tccagctcgt cgatgaagat
    13381 gatgcagggc gcctgcgcct tgccggtctg gaacaggtcc cgcactcgag cggcgccgac
    13441 cccgacgaac atctcgacga aatcggagcc cgaaatcgag aagaagggca cgccggcctc
    13501 tcccgccact gctctggcca gcagggtctt gccggttccc ggcggcccgg tcagcagcac
    13561 ccccttcggc attctgcctc ccagccgctg gaaccggctg gggtccttga gaaactcgat
    13621 cacttccttg agctcttcct tggcctcgtc cgccccggcc acgtcggcga acgtcacttt
    13681 cggccgatcg gcccgcacgg tccgggcgcc gagtcgcccg aaggaaagtg cattcgcggc
    13741 ccccgcccgc atctgccgga acatcagcgc ccagactccg aagatgagca gccatggcag
    13801 tgcggcgaac aggatggtga gccacgacat cccgccccgc ccggccgcga tttccactcc
    13861 cttctcttcc aggagccaca cgaccggcgc cgggtcggca aagggaagga atgcccggaa
    13921 ccgactcact tggcgctcgg cgatcgtgac ggggcgccgt aactccccgc ggatctcccg
    13981 ggaatcgggc agaatctcca cccgggcgat gttgttcgag tcgagctccg tgcggaaccg
    14041 gaagtagctg atctcggtgg cctgtcccat tcgtgacccg gccagctgca acaccgccat
    14101 ggtgatgccc agcagcacca gccagaccac catccttctc cagggacgga tctcggatcg
    14161 ctgttccatg ccacagaaac tcggtcatgt ccgttgaact cgacgtgaag caaggccgag
    14221 ggacccttca tgtccgcttg tgaagcgatt ctcagggctg ccgtggctcc ggttcatggc
    14281 ccgcgcgcta ctatggaatt gcagatcctt gaggaagacc gtgtgaccct ggcgaccagt
    14341 accacgcttt ccgagaatgc cctgagggtg ctcgaggcac gatatctggc tcggggtccc
    14401 gatggccgac cgatcgagac accggaccag ctgttcgacc gcgtagcctg ggccgtgagc
    14461 cgggccgaag agctgctcgg cactccggcc caggcgctgg agtgggccga ggagtttcgc
    14521 ggtctgctcg gctcgctcga ctttctaccg aactcccccg cgctgatgaa cgccgggacc
    14581 gcggtgggac aattgagcgc ctgcttcgtg ctgccggtcc ccgattcgct cgaggggatc
    14641 ttcgaggccg tcaaggacat ggcgctgatt cagcgcagcg gtggtggcac cggcttctca
    14701 ttctcgcagc ttcgtcccaa aggcgaggtg ctggcctcga ccggtggcga ggcctcgggc
    14761 ccggtgtcat tcatgaaggt cttcgacacc gccaccgagc aggtgaagct gggcggccgc
    14821 cgccgcgggg ccaatctggc cacgcttcgg gtagatcatc cggacatcct cgacttcgtg
    14881 cgcgccaagc tgcaggagga tgcgctccgg aacttcaata cctcggtctg gatgaccgac
    14941 gccttcatgg aagcgtaccg ccggggcgac cgctatgacc tgatccaccc ggttcgccgt
    15001 acggtggtgg ggcgggtgcg ggcgacggag gtcttcggca caattgtgga ggcggcgtgg
    15061 cgcaacggag agcccggtct cctcttcggt gacgcgatca accgggcgaa tccgacgcct
    15121 cagctgggcg cgatcgaagc cgccaatccg tgcggcgaag tgccgttgct tccgtacgag
    15181 tcctgtaatc tcggatcgct caaccttgcc catctggcac tcggcgaacg gggcgaagcg
    15241 gtggtggact gggagcggct gcgcggcctc acccgcaccg caacccgctt cctggatgac
    15301 atgatcgagg taaaccggct cccgctggcc agctgcgatg aggccacccg gcgcacccgg
    15361 aagctcgggc tcggtgtgat gggctttgcg gagctcctgc tgcgggttgg cattccttac
    15421 ggatcgcgcc gctcggtccg gctggcggac cgtctgatgc ggaccatcag cgagaccgcg
    15481 gcagaaacgt cccacgcgct tgcggccgag cgcggagtct tccccgcctg gcggggaagc
    15541 gtctatgagc cggaggggcg ctgccgccgg aatgcggcct gcaccgccat cgcgccaacc
    15601 ggaaccatca gtctcattgc tggcacgacc gccggcatcg agccgctctt cgcgctggcc
    15661 tatcgccgcc gccacacgct gaggggaaac ccgatgaccg aagtggctcc gctactgtac
    15721 gagtgcctcc aacggcacgt cgccgacccc gaggctgccg tgtcggaggt cgtggaaaag
    15781 ggacgcctgg gcgaggcgga aggcattccg cggtccttcc gccggctgtt cgtgactgca
    15841 cttgagcttt ccgtcgatga ccatctcgcg atccaggctg cctttcagcg ccatgtcgac
    15901 agctcggtat cgaagacgat caaccttccc ggcgacgcca cacagcatga ggtggcatat
    15961 gcctaccgcc gcgcctggga gctcgggctc aagggggtaa cggtctatcg gtatggcagc
    16021 agggccagcc aggtgatcga gttgggggcc aacgaggagc ctcaccacta cgatcaggca
    16081 gcgccgtgcg acccggggga atgccgggta tgatcattca gtggcctggc cgaccgaagc
    16141 cgcggtaact gtcgattctc tgagacctcg cccgtcatta gacgaaccct tacggagaga
    16201 gtcatgcccc gctttctgat ggtcgcccgg gacgacaacg ccgccttcgc ctccctcggc
    16261 cccgccgaaa cccaggccgt catccagaag tacatcgcct ggagtcaagg actgcgcgcc
    16321 tcgggaaacc tgcagctggg ggaaaagctg agggatggtg agggacgggt tgtctcccgc
    16381 cggaacggca aactgcatgt gaccgacggt ccctttgtcg agaccaagga gattctgggt
    16441 gggttctggc tgctggaggc ctccagctac gaccaagccc gccagatggc cgagtcctgt
    16501 ccccatctcc agttcggcag cctggagatt cgagccatcg aggaactcga ccggtccagc
    16561 taagcctggg actgggccac cgcgcgggtc acgtcagtcg tggtcaggat cccgaagagg
    16621 gtgtcgccgt ccatcaccag cagccgatga acggcttcct gttccatctt ccgggcggca
    16681 tcggcgatgc tgtcctcggg gccgatggtc aggagccggc ggctcatggc ttcttccacg
    16741 ttgtgctcgc ccagctggtc ccactccggg ccgtgaacag cttcgaagcg ctcggtcacg
    16801 tccgcgccgg cgtcggccca ctcgtcgacg aagaagttgc tgaccgactc ctctccttcg
    16861 acccagcgat cgaccggctc ggtctcgtcc tgttccaccg tctcttcctc agccgagggg
    16921 actgtcggct ccgatgccag gaattccacc acatcatcca tggtgaccac gccgacgact
    16981 ctgtggcctg ccacgaccgg cacgccggtg atgtgtttct gggcgagcag ttccaccaag
    17041 ttgcggagcg acagctccgg atcaaccacc acggtatcct gcgtcatgaa gtcacgtacc
    17101 cggcccatgt tgaatctcct ttgctcctta ccaccgctca agctgtctgg cccggtcctg
    17161 cactccggct ttccccttca tccggctcga ggtccggctc gaacgcgcct tgctggtatc
    17221 cgatggctcg gagcgtcggc tcatccagct tgcggaagaa ctcctccagc cactggagcg
    17281 ctccggggcc ctctacttcg gtccaggtgc gatcgagcac gtcgagaatg gctcgaatca
    17341 gctcctcctt acccataagg gcagcttcgg tggccttcgg aatgtgggtc acaccggtcg
    17401 acattttccg ctccatggct ggcctcacga tggcgtgtgt tggggagacg actcacccgc
    17461 gcatccagga cacctaccat tgtgtctgga tccaggccaa gagatcgtga gggtcgcatg
    17521 aaagccgctt gcgtggcagc gccctgatgg accagctctt ccgaacctcg gccgggcgaa
    17581 tcgtcgccgt cctgacccga cggctcggac ccgagcacct ggatctggcc gaggacgcgg
    17641 tccaggatgc cgtcctgcga gccctggaaa cgtggcccta ccgcggccag cccgagaatc
    17701 cggccggctg gctgatgcag gtcgcccgga atcgggcgct ggaccggctg cgggaagcgg
    17761 cggtgcggga tcgccatcat gccgccctga tggcggagtg ggctgatgac cctccgaccg
    17821 acgacgatgc gggcgacgcc gagctgcggc tgctgctgct ttgctgtcat ccgtcgttgc
    17881 cgtctcggag ccgggtcgcg ctggcgctca agaccgtggg cggattcggc gtcggggaga
    17941 tcgcccgagc ctttctggcc cagccctcgg ccgtggcgca gatcctggtc cgggccaagc
    18001 gaagcctgcg agaggccgag gtggccttcg acttgccgtc cgaccaggcc cttcacgacc
    18061 ggatcgaaag cgccctggag acgctgtacc tgatgttcaa cgaggggtat tccgccaccg
    18121 cgggggagca ggtcgtccgt gaggacctgt gcgtggcggc gatccggctg gcgcaactgc
    18181 tggcggccaa tccgctcacg gcccggcccg ccctactggc cctgctcgcg ctgatgcacc
    18241 tgcagggcag ccggcttcgc agtcgtaccg accggtcggg cgacctgctt ctgctggccg
    18301 accaggaccg cgccgggtgg gatcagccca tgatcgccgc cggtctggcc tggctgggcc
    18361 gttccgcggc cggggacgag gagacgatct atcatctgga ggccgcgatc gccgcctgcc
    18421 acgcggtcgc gccggatgtg gagcggaccg actgggtccg ggtgttgagt ctctacgatc
    18481 agctgctcca ggccaagccg acgccggtgg tccgactcaa ccgggccgtg gcactgggcc
    18541 gggtccatgg tccccgcgct gcgctggccg cgctcgatgg gctggaggcg catcccgcca
    18601 tgcggcggta cgcctggttt cccgcggccc gggcggtgtt cctggaagct tcgggcgatc
    18661 gcgaggcatc cgccgtggcg ctccgccggg cgatggacct ggcgggcacc gaacccgagc
    18721 gccggctcct gggggagcga ctctcgagat tgctgaggta gcgctctatg gttcatcaag
    18781 cggctgctgc ctgaggctgg aaggcggaat aaactggaga gtgcccagtg cccaatgccg
    18841 attgcagaag gggtcgccca atattccccc tctgccatgg gcattcggca ttgggcactc
    18901 tccggttcat tccctcctcc tcccactttc cctcttccct ggaacgcacg atgctcatgt
    18961 tgctgctggg actgttggcg ccggccgata ccctgttcgc cgtgacgatt cgcaccggcc
    19021 cggcctggga ccaggccaaa ctgcccagcg aacaggtcca tttccggacc cactcccaga
    19081 acctgatgaa gctgcgacag gatggccggt tggtgctggg tggacgctac ggagacgtag
    19141 gactgattct ggtgcgggcg gccgacgagg cggaggcgcg cggattgttc gcggctgatt
    19201 cgtccatcgc gcggggagtc ttccgggccg agttccaggt gtggcgcacc atcttcgacg
    19261 ggacactctc gcctaacagg taggaggggg gagggaggag gggggagtga actggagagt
    19321 gcccaatggc cagtgcccat ggcagaaggg gattgcctgt ggcgccctct gcaatgggca
    19381 ttcggcattg ggcactctcc agtttattcc tccctccccc ctctaacctc ctccctcctc
    19441 agttctggcc gggttcggct tgggaaacag taccgggggc ttggtggtct tgacgccctc
    19501 gaccggtgga gtccccagct ggttccatga ctccgcggtg atctcacctg tctgacccag
    19561 ggccgaccac agctccagtg ctttgcccgg catgaacggc gcactcatga cggtgaggcg
    19621 atagaggcag cggcagaggg ccgccaggac ggcatcgagg tcggcatcgc gcttcgcctt
    19681 ggccagcgcc cagggttcgg tttggacgat gtagtggttc gccgtggaga ccagggacca
    19741 cgcggcatcg gcgccggtcc tcaggtcgaa tcgatccatg gcgccggcat aggctttgag
    19801 cgccgccgct ccagcctggt ccagcgtggt gccatccgtg accggcggcg ccacgccgtc
    19861 ccggtagcgc tccagcatgg ccagcgagcg tgaggccaga ttgccgagtc cgtctgccag
    19921 gtcggcgttg taccggccgt cgaaccgttc ccaggtgaag tccccgtccg cttcgaaccc
    19981 gatctcgcgc agcaggtaat agcgcagcgc gtcgaccccg tggcgaccca tggcgctatc
    20041 gagggtcacg gcggtgcccg ctgtcttcga catcttggcg ccttcccact ggacgtaccc
    20101 gtgggcccag acccggcggg gcagggccac ctcggcggac agcagcatcg ccggccagat
    20161 cacgcagtga aaccgggtga tccccttgcc gatgacatgc agatccgcgg gccagagccg
    20221 ctcgtagccc gcctcgggaa aaccggtggc cgagaggtag ttgatgagcg cgtcgaacca
    20281 gacgtacacc gtctgctgct catcgcctgg aaagggaatg ccccacggca tccgctgccg
    20341 cgagatggat agatcctgca gcccgccttc gatcagccgc agcacctcgt tgcgccggat
    20401 ctcgggctcg accaaatact ggcccgatcg gatcagctgg agcagccggt cgccgtggcg
    20461 gctcagccgg aaaaaccagt tgcgttcctt ggtcggcacc aggtcgagcg tggggtgctc
    20521 gatgcatcgg ccgttggcga tctgggcgtc ggtcttgaac tcttcgcagc cggtgcagta
    20581 aagcccctcg tactccccct gatagaggtc gtccgggtga tgccgctgga tccgttgcag
    20641 cagcgccgtg actccggcct ggtgccgcgg ctccgtcgtc cgaatccagt cgtcgttgct
    20701 acattccagc cgctgccaga agcgccggaa ccgctcggcc atctcatcga cccactggcg
    20761 tggggtcacg gcgccattct cggccgcctg aatcaccgac tggctgtgct cgtccatccc
    20821 catgagaaaa tggacctggt cgccccggag ccggcgatag cgggcgatag cgtcggcgcc
    20881 caccttctcc agcgcgtgcc cgaggtgcgg atcgccgttg gaatagtcga tggcggtcgt
    20941 gaggtagaac cggggcatca gctcggggtc tgatcggtgc tgggagagcc ccccggcggt
    21001 ccacctctcc ggttgcggcg ccgccggcgg cggcgccggg gggttaccgc cggtgtagcg
    21061 tctttctggg ccgcggccgg cagagcggga acggcgacgg gccctgccgc gggcgggggg
    21121 gccgggtcca ccacgggggc ggcgatcaac ggttcgccca gcgcttccag ctcggccttg
    21181 aggtcggcca gcagcacggt tcgaggtccc agctcgtcat tccgcaggaa cacccgttct
    21241 cggaagatgt cgacggccac caccttttcg gggccccggc cggtccgcag ggtcttgcct
    21301 tccttgggga accgcttgcg gctggtgacg tagaactcgt gctcgtagcg gagacagcag
    21361 agcagccgtc cgcagccgcc cgagatctgc gccgggttga gcgagagatg ctggtccttg
    21421 gccaggctca ggctcaccgg cgacaagtcc ttgagccagg tggagcagca atactcccgg
    21481 ccgcaccggc ccactccgcc caggcgggcg gcttcatcgc gcatcccgat ctgcctcagc
    21541 tcgatccggg tgcggtactg gcccgccatc tcccggacta ggttgcggaa gtcgacccgc
    21601 tgctccgccg tgaaatacac ggtgagcttc ttgcgatccc actgccactc ggcatcggag
    21661 atccgcatgg cgagtccatg ggtccgcgcc ttttcggtca cgctcttgcg gacttcctct
    21721 tcctggcggc gcagctcgtt ggcctgtcgg atctcctcct gactggcgcg ccgcaccacc
    21781 gcccgctggg cattggcggg gtccggctgg tcggcgccaa cggcgcaaga ggaacagctg
    21841 gtgcacttct tggccgcggt gtcccccacc aagctgacca ggccgaaatc gaagcctcgc
    21901 tccacttcca cgatcaccgg atcgcgcagt ctgagcggtt cggactcgtc ggaccagagg
    21961 aaatagtcct tgcgaatgcc cttgaaccgc acttccactg tggcgggcat cacacctcgg
    22021 cgaacgttcc catcgcggcg tacttctcga cccggcgacg gaccagccgc tcggggcgga
    22081 ggcgcttgag ctcaccgaga tggcggatca gcgcttcgcg cagcacctcc gcggccgcgt
    22141 cggggtcctg gtgcgctccg cccaggggtt cagggatgat ctcgtcgatg agcttgagcc
    22201 gcagcaggtc ctgggcggtc agcttgagcg cttcggccgc ccgctctcgc tgggtcgcgt
    22261 ccttccacag aatggccgcg cacccctcgg gtgaaatcac cgaatagacc gaattctcga
    22321 acatgatgac ccggtcggcg actcccagtg ccagcgcccc gccggatccc ccttcgccga
    22381 ttacgaccgc gatggtcggg gtttccagcg cgctcatctc cagaatgttg gtggccagcg
    22441 cttcggactg gcctcgctcc tccgcgccca ggccggggta ggcgccgggc gtgtcgacca
    22501 gtgtcacgat gggcgcgtgg aaccgggcgg cgagccgcat cagccggagc gctttgcggt
    22561 agccctccgg atgaggcatg ccgaagttgc ggcggatgtt ctccttggtg tcgcgaccct
    22621 tctggtggcc gatcaccatg accgactggc ctgctatccg ggcccacccg cccacgatgg
    22681 cgggatcgtc ccggaacagc cggtcgccgt gcaactcgat gaagtcggtg aagacggtgt
    22741 tgaggtagtc cagcgcgtag ggccgtttcg gatggcgggc cagcaggacc cggtgcatcg
    22801 gcgtgaggtt gcggtagatc tcctcccgca tcccgtccag cttggtctgc agcaggccga
    22861 tctcttcggc cacgtcgata ccctgatcgc ctccgagctt gcgcagctcc tcgatctggc
    22921 gctccagatc gagcagtggc ttctctacgt ccagcacgta gtgattcgcc atcgccgctc
    22981 taccccagct ctgtcatggg catcgggcac cgggcaaggg acattcgcct agcctgctct
    23041 tacgaacgtg acgccgtccg ggcccaggag gccccggagt gcagtgacga cctcttcctg
    23101 gggttcgata cggtgccggc gggacttcag gcgtaccagg acgccgtcgg ggccggtcca
    23161 ctcaatatag acgggagccg ggccgggatg cgcggcacac agggccgccg cggagcggac
    23221 cacctcgggg gggatcccgt tcgctcccga ccaccgcagg ctgatcgcca gggagcccga
    23281 cttccggaga tcgtccaggg gctgggcgtt ctccaccacg aacggcgcga catcctcgcc
    23341 ccggtcgcgg gcggaaaagc cgcccgtcag cagcatggcc cggtccgtcc cgattacctg
    23401 gttgagcttg gcccagctgt cggggaacac cagggcgtcg gcggtgccgt gaaagtcctc
    23461 cagagtaagg cgggcgtact ccttccccgt cttcttggag atctgccgtt tgacggcggt
    23521 caccaccgcg gccactgtca cctggtgctc gctccattgg cccagggtgg cggtcgagcg
    23581 ggtggaaaac agctcgacct cggtccgata gcggtccagc gggtggcccg agatgaagaa
    23641 gcccagcaca tccttctcgc gggtgagccg gtcggcttcc agccaggggg gcacgttagg
    23701 cagagcggcg tgggtcggcc gggtcggcac cgcctcgccg aagagcgacg cctgaccggc
    23761 ctcgcgctcc tgctgccgca ggctggcctc ggccagcacg gtatcgaggg ccacgaacaa
    23821 ctgggcccga tgtccttcga gcgaatcgca ggcgccggcc gcgaccagcg actcgaggac
    23881 ccgcttgttc accagccgca ggtcgatccg gtccaccagg tcggccagcg attcgaaccg
    23941 ctgggtgtgg cgggcgacaa tgatggagtc gatggcgccc cggcccacat tgcggaccgc
    24001 ccccagcccg aaacggatcc gccgggggcc gaccacggtg aacttgtagc ccgactcgtt
    24061 gacgtcgggc ggcagcacgt cgagccccag ctcccgggcc tcgttgatgt actgcaccac
    24121 cttgtcggtg tcgccgatct ccgaggacaa cagcgccgcg aggaaatcgg ccgggtaatg
    24181 ggtcttgagc caggcggtgt gatacgacag caccgagtac gccaccgagt gcgacttgtt
    24241 gaagccgtag cggccgaagg tctcgatctg ggccgagatc tcctccgcct tcctccggtc
    24301 cacgcccttg gccaccgcgc gttcgacgaa ttttcccaac tccttcttga tgagctccgc
    24361 gtccttcttg cccacggcct tccggagcac atcggcttcg gccagcgaga accccgccag
    24421 cacgttggcg atgcgcatca cctgttcctg ataggtgatg acgccgtagg tgggctcgag
    24481 cacctcccgc agcgagggat ggggatagct gaccggttcc tgtcccagct tgcgccggat
    24541 gaacaccgtg tgcatcccgg cgtcgagcgg accgggccgg agcagcgcgt tgctggccac
    24601 caggtcgtcg aaccggtcgc accgcatggc gcgcagcgta tcggtcgcca gcggcgactc
    24661 gaactggaag acgcccgccg tgcgaccctt gcggagcatg gcgtagaccg ccgggtcgtc
    24721 gaactccatc gcggtgagat cgagccgctc accggtccgc gccaggatgc tctccagcgc
    24781 gtcgtgaatg acggtaaggg tcttgaggcc cagcatgtcc atcttgagca tgccgacctt
    24841 ctcgagcgcc accatgtcgt actggcagat gatggcgtct tcgccgtcca ggcccgcgcc
    24901 cgcgcccttg gtcggggcgg tacagaccgg cacgtactgg tccagcggtc cgggcgcgat
    24961 caccacgccg gcggcgtgca cgctcgcgtg gcgtgacatc ccctcgatcc gcgaagccag
    25021 ctccgccatc cgctggtaga ccgggttttc cttcaccagc tccctgagct cagtgacctt
    25081 ctggagcgct tcgggaatgg tcagactgta ggccggaccg gacgggatca gcttggagag
    25141 ccgatcggct tcgccgggcg gaatcttgag cacccgcgcc acgtccttca cggcggcccg
    25201 cgccttcatg gtgccgaacg tgatgatctg tcccacgctg tcgcggccgt agcgctcccg
    25261 cacgtagtcg atcacctcgc cccggcgctc gaagcagaag tcgacgtcga tgtcgggcat
    25321 cgatacccgc tcgggattga ggaagcgttc gaacagcaga tcgaacttga gcgggtcgac
    25381 gtcggtgatc cggagcgcgt aggccaccag cgatccggcc accgagcccc ggcccggccc
    25441 caccgggatg tcccggcccc gggcggcgct gatgaaatcc tccacgatga ggaaatagcc
    25501 ggcgtagccc gcggtgttga tgaccccgag ctcgtaggcc agccgatcct cgatggccgg
    25561 gggcagcgga tcgccgtacc gcgtcaccgc gccggcccgg gccagatgct ccagcaatcc
    25621 ttcatcggtg tcgaagcccg cgggacgggg gaagctgggc acgtaatacc gcttctcgaa
    25681 atcgaactcg cagcggtcgg cgaccagctg ggtatggctg atggggtcgg gcaaatcggg
    25741 gaagagcgcc cgcatctccg cctcgctctt cacgtacgat tcctgcccgg tgaaccggaa
    25801 ccgcttgggg tcatccaggt cggcgccggt gccgatcgcc agcaacacgt cgtgggcctc
    25861 ggcgtcgtcg cgccgcagat agtgcgcgtc gttggtggcc accaccccca accccagctc
    25921 ctgccccagg cgcagcatcc cgtcgcgcac ggtggcttct tccgggatgc cgtgctcctg
    25981 gatctcgagc cagaagtccc ccggcgcgaa ggtccgggcg aaccactcgg cgctggcccg
    26041 ggcatcgtca taccggccca tccgcaacca cagcgcgatt tcgcccgaga ggcacgcggc
    26101 cagcccgacg atcccttggg aatggcgctc cagcacctcg cggtcgatcc gggggcggcg
    26161 atagaaccct tccttgtatc cgatggagct caagcggatc aggttctggt agccggtctg
    26221 gtccttcgcc agcagaacga ggtgactgta gtgggccggc gcccaggcgg gcttctgctg
    26281 agcctggcgg ggtccgaaag ccagataggc ttcgaagccg agaatgggcc ggatcccggt
    26341 tgcccgggcg ttctcataga aggcccaggc cccgtgcagg ttgccgtggt cggtgatcgc
    26401 caggctgtcc attcccagct tcttgacgtg ggcgaccagc tcgggaatcc ggttggctcc
    26461 gtcgagcagc gagaattcgc tatgggtgtg caggtgaacg aaggccacgt cgcgcgcacc
    26521 acaccgggcg tccagcggga cactcggggg gctccgtcct tcatgtcacg gtgtccggcc
    26581 tcgctccgga cgcggaacga cgtcagagca ccaagtgggg tcattggtgc tggcaacctg
    26641 gggtgggcgc gtccctttta ggaagagcga acccgttgcg ccaagctccg cagaccggag
    26701 ccgaccgttt ggcctccggc acggggcaaa cctatccggc ctgcgcttta ttgtcaaaaa
    26761 ccattgtcgt gacttaagtt acgagaatcc aaacctcgac taaaatgtcc ggttctccgc
    26821 tacgtcccgc ctggttggcc ggacttaccc tggccgccgc ctgcggcggc gacgatggag
    26881 gctcccctcc cgcgggcgga gccaactgct ccagtcccac ctcggtgcaa ctggcggtgg
    26941 gacaacatca ggtggtcaat ccagccaccg ccaacggctg catcaggctc ccggccgcca
    27001 gcggggccga ggccgagtat gtctttgcgc tggtctccgg cgccggtacg gtcaccgacg
    27061 ctggggtctc gggcggctac tcggttcgag tagggccgga ggggtccttt gcagcgtcgc
    27121 cggcggcggg tgccccggct tcggccctgg cccagggacg cggtgcgggg gtagcagagg
    27181 cgtttcaccg cggtctgcgg gagcgggagc ggcagctggc ggccgatccc cgcaaccggc
    27241 cttcgattcc gcgttcccca ccggccggga ctccaccgcc cgagcccggg tcggagcgga
    27301 agttcgccgt ctgcaagacc accgattgca acaccttcga caccgtgacg gcggtcgcgc
    27361 gttcggtcgg gagcaaggtc gcggtctacc tggacaacac ggtgccgacg gctgattcgc
    27421 tgactcaggc ggacctggac gatctcaagc gtctgttcga tctgtatcac tatccgatcg
    27481 ataacaacgc cttcggcacc gagtcggacc tcgacatcaa cggggtcacc atcatcctgc
    27541 tcaccgacgc cgtgaacgcc ttgacgcccg attgcagcca ggggcggatt ctggggtatt
    27601 tcttcggcgg cgatctgctc aacatcacgg ggtccaatca tggggaggtg ttctatgcca
    27661 tggttcccgt tccggccacc ccgacctgca ccgcggccac ccgggtccag accctggtac
    27721 ggctcaagcc gacgctgatc cacgagttcc agcacatgat cagcttcaac cagcacgtgc
    27781 tggtgcgagg cggcaacgtg gaggagacct ggctcaacga gggcctcagt cacttcgc
//
LOCUS       DASWKS010000642         3684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3314936, whole genome shotgun sequence.
ACCESSION   DASWKS010000642 DASWKS010000000
VERSION     DASWKS010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3684
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3314936"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>3684
                     /locus_tag="VGA78_18410"
     CDS             <1..>3684
                     /locus_tag="VGA78_18410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895911.1"
                     /translation="SPPQLDAVSTADTRPSTLTISHTTGSGSNRLMLVGISFVNDRAE
                     TVTSVNYNGVALTSVGTATSVDDARVEIWRLIAPPTGTYNVIITFSAPLRRAATVGVM
                     TFTGVHQTTPLGTFASATGQAPTTEPSVNVTSASGELVFDTVACESCTSLTVGAGQTQ
                     RWNLQELSGAPATLGAGSTEAGAASVTMSWTRGSDDHWAIGAVSIKPASGGAISFQSG
                     SQGNTGDNQVGSLTVSHTVSSSGTNKVLVVGVNIYHATSGTMASVASMTYAGQPMTFL
                     ATAIDNAAFGSNRIRSELWYIKDPTTGTNDVFMTFDINCRAVAGAITFTGVDQTTPFG
                     SAGTNGGNDTTPTVTLSSAAGELVVDTVGIRNIATNTVTLTAGANQTERYNDRTGIDD
                     TNSVGAGSEEAGAGSVTMSWTSSEARLWAIVAAPLKPAGGSAPTVDATSSGQTQRTGL
                     TISHTTSGTNRLMLVGVTLNNQNSEIVSSVTYNGVGLTQVGSVASATDTRVEIWRLIA
                     PATGTNNVVITFSANVINGAKAGVATFTGVDQTTPLGTFASANGNSAGPATVDVTSAT
                     NELVFDTVGCEGDDLGTLCSSLSVGAGQTQRWNLTAAEPGTSGAQTLAAASTEPGAVS
                     VTMSWSISPASAVPWAIGAVPIKPIVSAVNITVSVHHTKTDGTDPQLIVRSTSTTIDS
                     NTANPLTLTIGSGAQQTFTAADPRLLRVLVTVNSLTGGASFILDYDSIADPTNLATPV
                     VTVPEGGAAFLILVPLVPYLMAAIWRRRRLAGGIASLLLGAILAISLAANQVIPTTAA
                     PDVFYLHDTFTGTGIAHQETLTTAQITESSYSLPAVAGGTDQLYLVSVAIYGTGITVS
                     SISGGGLTWTLQKAQCSARIANPRIEVWQAFGSPSSFAATVSLSAAPNRSSAAISRYS
                     GANTTTPTEAAAGSNSNGLNGACTGGTDNANASLALTSSQNISVLYVATHPRNQTITS
                     ADVDYTQRAFISNSLSGGGANLYVHDRTLGLAGTDSADHVLNNATDWDMAGLVIMPAS
                     SITPAGKYINTTEGTGGSTLTFNAAGQNAYWYVDQTWPTGNDNASIAAGNYALNMYFS
                     ALPTNFPQVVATNTSATTTASTSHTVSLASGIQSGDLLIAMLSGYFDSGSTPVDVDWP
                     AGWTEFFEQDATSSTLHLAVAGAYRKADGSEGSTISVTTNLAVLAAHNAYRITGAADP
                     AVQPPEAASIAYILNADSIDPPSL"
BASE COUNT          699 a         1296 c         1067 g          622 t
ORIGIN      
        1 cagcccgcct cagctcgatg ctgtctccac cgcagacacg cgccccagca cgttgaccat
       61 ctcccacacc accggctcgg gatcgaaccg gctgatgttg gttggaatct ccttcgtcaa
      121 cgatagggcg gagacggtca cgtcggtgaa ctacaacggt gtggcgctga cttctgtcgg
      181 caccgcgacg agcgtggacg atgcccgagt ggagatctgg cgcctgattg ctccgcccac
      241 ggggacgtac aacgtcatca ttacgttcag cgcgccgctc cgccgggcgg ccacggtggg
      301 cgtgatgacc ttcaccggcg tgcatcagac cactccgctg ggcacgtttg cctcggccac
      361 cggacaagcg ccaaccacag agccatcggt gaatgtgacc tcggcctccg gcgagctggt
      421 ctttgatacg gtcgcctgcg agagctgcac ttcgctcacg gtgggagccg gccagaccca
      481 gcgctggaac ctgcaggaac tctccggagc gcctgcaacg ttgggtgcgg ggagtacgga
      541 ggcgggggct gcctctgtga cgatgtcctg gacccgtggt tcggacgacc actgggctat
      601 tggcgcggtg tccattaagc cggcttcggg cggcgcgatc tccttccagt ccgggtccca
      661 ggggaacacg ggtgacaacc aggtcggcag cctgacggtc tcccatacgg tcagctccag
      721 cggcacgaac aaggtcctgg tggtcggcgt caacatctac catgccacca gtgggactat
      781 ggcgagcgtt gcaagcatga cctacgccgg gcagcccatg accttccttg cgactgccat
      841 cgataatgcc gcgttcggga gcaaccggat ccgctcggag ctctggtaca tcaaggaccc
      901 gacgaccggc accaacgatg tcttcatgac gttcgacatc aactgccgcg cggtcgccgg
      961 cgccatcacc ttcaccggtg ttgaccagac caccccgttt ggcagcgccg ggaccaatgg
     1021 cgggaacgac acgaccccga ccgtaaccct ctcgagcgct gcgggtgagt tggtcgtcga
     1081 taccgtcggc attcgcaaca ttgcaacgaa cactgtcacc ctcaccgccg gagccaacca
     1141 gaccgagcgc tacaacgatc ggaccggaat agacgacacc aactccgtcg gcgcaggatc
     1201 cgaggaagcc ggcgcaggct cagtgacgat gtcctggacg tcgtccgagg ccaggctctg
     1261 ggcgatcgtt gccgccccgc tcaagccggc cggtggctcg gcgccaactg tcgatgccac
     1321 gtcgagcggc cagacccaac gcaccggcct caccatctcg cacaccacct ccggcaccaa
     1381 ccggctgatg ctggttgggg tcaccctgaa caaccagaac agcgaaatcg tcagctcggt
     1441 tacctacaac ggcgtagggc tgacgcaggt cggctcggta gcctccgcga ccgacacccg
     1501 ggtggagatc tggcggctga tcgcgccggc cacaggcacc aacaacgtcg tgatcacctt
     1561 cagcgccaac gtcatcaatg gcgccaaggc cggtgtagcc accttcaccg gcgtggacca
     1621 aactacgccg ctggggactt ttgcctccgc caacggcaac tcagccggcc cggctactgt
     1681 ggatgtgacc tcagcgacca atgagctggt cttcgacacg gtaggttgcg agggtgatga
     1741 tctcggaaca ctctgcagct cgctcagtgt cggcgcaggg cagacccagc ggtggaatct
     1801 aaccgcggcg gagcccggga cttcgggcgc ccagacgctg gcggccgcca gcaccgagcc
     1861 gggggcggtc tcggtcacca tgtcctggag catctccccg gcctcggccg tcccctgggc
     1921 gatcggtgcg gtcccgatca agccaatcgt ttccgcggta aacatcacgg tatctgtcca
     1981 tcacaccaag accgacggga ccgatccaca gctgatcgtc cgctccacca gcaccaccat
     2041 cgacagcaac accgctaatc cgttgacgtt gaccatcggc agcggagcgc aacaaacctt
     2101 taccgccgcc gatcctcgat tgctccgagt ccttgttacg gtcaacagcc taaccggcgg
     2161 cgccagtttc attctggact acgactcgat cgcggatccg accaacctgg cgaccccggt
     2221 ggtcaccgtg ccggaagggg gtgcggcctt cctcatcctg gttccgctgg tcccgtacct
     2281 gatggcagcc atctggcgcc gccggcgctt ggcgggtgga attgcctccc tgctgctggg
     2341 ggcgatcctg gccatctcgc tggcggccaa tcaggtgatc cccaccaccg ccgcgccgga
     2401 cgtgttctac ctccacgaca ctttcaccgg caccggcatc gcccaccagg aaaccctaac
     2461 caccgctcag atcacggaga gctcctacag cctgcccgcg gtggccggtg gcaccgacca
     2521 gctctatcta gtctctgtgg ccatttacgg gaccggcatc acggtctcct cgattagcgg
     2581 cggcgggctg acctggacac ttcagaaggc acagtgctcg gcgcgcatag ccaatccgcg
     2641 gatcgaagtc tggcaggcgt ttgggtcacc aagctcgttc gcggccacgg taagcctcag
     2701 tgccgctccc aaccgttctt cggcggccat tagccggtat tccggagcga acaccaccac
     2761 gcccaccgag gcggcggcgg gttcgaactc gaacggcctg aacggcgcct gcaccggggg
     2821 cacagacaac gcgaacgctt ccttggctct gacctcctcg cagaacattt ccgtgttgta
     2881 tgtcgcgacc cacccacgca atcagacgat cacgtccgcc gatgttgact acacccagcg
     2941 cgccttcatt agcaactctc tcagcggagg tggtgcgaat ctctatgttc atgaccgcac
     3001 actggggctt gcgggaacag actccgctga ccacgtccta aacaacgcca ccgactggga
     3061 tatggcaggg ctggttatca tgcccgccag tagcatcacc ccagccggca agtacatcaa
     3121 caccacagag ggtaccggcg gctctacgct gaccttcaac gccgccggcc agaacgccta
     3181 ctggtacgtg gatcagacct ggcccaccgg caacgacaac gcctccatcg ccgccggcaa
     3241 ctacgccctg aacatgtact tcagtgcgtt gcctacgaac ttccctcaag tcgtcgccac
     3301 taacacatcc gccacgacga ctgcgtcgac cagccacacc gtcagcctcg ccagcggcat
     3361 ccagtccggc gatctgctaa tcgccatgct ctccggctac ttcgacagcg gtagcactcc
     3421 cgtcgatgtc gattggccgg caggttggac ggagttcttc gagcaggatg ccacctccag
     3481 cacgctgcac ctggctgtcg ccggggcata tcgcaaggcc gacggaagcg aggggtccac
     3541 catctcggtg accaccaacc tggcggtcct ggcggcccac aacgcctacc gtatcaccgg
     3601 agccgcggat cctgccgtac agccaccgga ggcagcctca atcgcataca ttctcaacgc
     3661 cgacagcatc gatccacctt ccct
//
LOCUS       DASWKS010000643         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1467519, whole genome shotgun sequence.
ACCESSION   DASWKS010000643 DASWKS010000000
VERSION     DASWKS010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1467519"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..2184
                     /locus_tag="VGA78_18415"
     CDS             259..2184
                     /locus_tag="VGA78_18415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895912.1"
                     /translation="MRSTVRSALVAGVAAVSVAACRDSTVDPTLTEPSLSRATPGAAF
                     EWSVPARFGPDRDGDGLRDYFRLADQINPSSWPVDFDACQLPPGSRYVWYVNDFLAAS
                     VTSCTYTHHFRAEGTYEVALHVIRVPGPGLWAEDVVTVQDWLIVSFGDSYASGEGVPE
                     VTQNVEAVLQSLNTALQQLVTARLLLNAAAANLQDALERKGLAEAVLADAQQAAGDFL
                     DACNPTDFTSIQECADFLAGLPFTTFAAAQDHFNQAVQNAQDRLNSLITALQQAQAAF
                     DAAQSAVNNLIQTISLLQAGLPPAKWQAPYPNEIWNDENCHRSANAAPARAALALEEG
                     DPRTSVTFLHLACTGARVDMFRASLREQIPWADELIGSREIDAVLVSIGGNDAGFASL
                     AIACVVQQPCYVDSPAFDPAAGAAYCGFVGLFGLGTLCNNLFGIFPAQSAKAILEEGV
                     GGLPPRYAELAEELLPELGGLLEPEPGPGVPQPPLEPVDRVRSNRVYITEYVDMTKDD
                     AGAYCVGSLANLLGTIPGVTPDELLWLDLVAAASINRAGATAALTHGWNAVSGIYGGY
                     ATHGYCADAHWVVRAHETFLRQGDEKGMAHPNGVGHAFNGQAIFAALLADLYPGGLGG
                     SPRPPNQPGPGKPVVLP"
BASE COUNT          350 a          770 c          743 g          382 t
ORIGIN      
        1 cgccgctagg ctgttgaccg gaagcccgct tcctcgcgct tcctgccatc gccagaccgg
       61 gacaacgtgg cggcgcgcta ccgcaccgtg gtcgcccgga tcagtcaggt cggggccggc
      121 acctaccata gtgtgcagtg gcgagtcagc caggatttgc ggaccccccg aagtgagtgt
      181 atttcagaca ctctaagagc ctaaaccact ccgccggggc agccgacggt cgcagttccc
      241 cttcccgatg gtgccaacat gcgatccacc gttcgcagcg cactggtcgc aggtgtcgcc
      301 gctgtctctg tcgccgcctg ccgtgactcc acagtcgacc cgaccctgac ggaaccctcg
      361 ctcagtcggg ccactccggg agcggctttc gagtggtcgg tcccggcccg gttcggtccc
      421 gatcgagacg gtgacggact gcgcgactac ttccgcctgg ccgaccagat caatccgtcc
      481 tcgtggccgg tcgacttcga cgcgtgccag ttgcccccgg ggagtcgcta tgtctggtac
      541 gtcaacgatt tcctcgccgc gtcggtgacc tcctgcacct acacgcatca ctttcgcgcc
      601 gagggaacgt acgaggtggc cctgcacgtg atccgggtcc cgggaccggg cctctgggcc
      661 gaggacgtcg tgaccgtgca ggactggctg atcgtgtcct tcggcgactc gtacgcatcg
      721 ggagagggcg ttcccgaagt gacccagaac gtggaagcgg tgcttcaaag tctcaacacc
      781 gctctccagc agctggtgac cgccaggctg ctgctcaatg ccgcagcggc gaatctgcag
      841 gatgccttgg agcggaaggg actggccgag gcggtgctgg cagacgccca gcaggcggcc
      901 ggcgacttcc tcgacgcctg caacccgacc gatttcacct ccattcagga gtgcgctgac
      961 tttctggccg gtcttccctt cacgaccttc gccgccgccc aggaccactt caaccaggcg
     1021 gtgcagaacg cccaggaccg cctcaacagc ctgatcacgg cgctgcaaca ggctcaggcg
     1081 gcctttgatg ctgcccagag cgccgtcaac aacctgattc agacgatcag cctgctccag
     1141 gccgggctcc cgccggcgaa gtggcaggca ccctatccga acgagatttg gaacgacgag
     1201 aactgtcatc gttcggccaa tgcggcgccg gcccgggccg cgctcgcgct ggaagagggt
     1261 gatccccgga cgtcggtcac cttcctgcac ctggcctgca ccggggcaag agtggacatg
     1321 ttccgggcca gtctgcggga gcagatcccc tgggcggacg agctcatcgg gtcccgggag
     1381 atcgacgcgg tcctggtctc gatcggcggg aatgatgccg gctttgccag tctcgcgatc
     1441 gcctgcgtgg tccagcagcc ttgctacgtc gattctccgg cgttcgatcc cgccgcgggg
     1501 gccgcgtact gcgggttcgt tgggctgttc gggttgggaa ccctgtgcaa caacttgttc
     1561 ggcatcttcc ccgcccagag cgccaaggcc attctcgagg agggggttgg aggcttgccg
     1621 ccgcggtacg cggaacttgc cgaggagctg ctgcccgagc tcggggggtt actcgaaccc
     1681 gagccgggcc cgggggttcc gcaaccgccg ctcgaaccgg tggaccgggt ccggtcgaac
     1741 cgggtgtaca tcacggaata cgtggacatg accaaggacg acgccggcgc ctattgcgtg
     1801 ggcagcctcg ccaatctgct cggcaccatc ccgggagtaa ccccggacga gctgctgtgg
     1861 ctggatttgg tcgcggcggc ttcgatcaac cgcgcggggg ccacggccgc gctcacccac
     1921 ggctggaatg ccgtgagcgg gatctacggc gggtacgcga cccatgggta ttgcgccgac
     1981 gcgcactggg tcgtgcgcgc ccacgagacc ttcctgcggc agggcgacga gaaaggcatg
     2041 gcgcacccca acggggttgg acacgccttc aacgggcagg cgatcttcgc ggcccttctc
     2101 gcggacctgt accccggggg gctcggaggt tcgcctcgac cgccgaacca gcccgggccc
     2161 gggaagccgg tcgtcttgcc gtagccggca gcgggcccgc ggggtccagg ctcctgatcc
     2221 cgatcctcgg cctggttccg gcgat
//
LOCUS       DASWKS010000644         8655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_720183, whole genome shotgun sequence.
ACCESSION   DASWKS010000644 DASWKS010000000
VERSION     DASWKS010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720183"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1648)
                     /locus_tag="VGA78_18420"
     CDS             complement(<1..1648)
                     /locus_tag="VGA78_18420"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9895913.1"
                     /translation="MGPFLLGAVRLLLAAQAAEATLAGSVRDDVTGKALANAVVALPD
                     LNRLAVTGADGRYALSQVPPGPQHITVRYLGYAPRTLHALVPRVGKLEINVSLHPDPL
                     RLPGIEVRPQVIVRGLEPMSGLASPDRAASLTAVRNHPLLAEPDVFQALSGGEVGLRP
                     ESPTGVHIRGGAADQTGYLLDGIPVLSPYHAAALFSAWNPDALAQVELWSTASSPAYP
                     DALSGTIAAATRAPGSRLQLQGGATTTQTRLTVDGPAGSGGAGYLLSLRSAYPGLLAS
                     KDEASYLGGESGDWLAKLEAPLWRGRIRLLGYGSGNEITSAARATAGDVPGENPRNSF
                     EWTSRSLGVEWSRVVRRYSMRLTGWTASGDAKSTWTAEAGRAGLGWSRRDQGLLAAVD
                     HSSAGSFSTLGVRFHRSETTYQVASDSAPDLSLDARTPLAAGFLQHVRSLRRFILTLG
                     ASLAETDGTFYSSPAVQLRWQPTARVGVSGSLGRSHQFAQSLRNPESVVGSVFPVDLY
                     LGAGAPGIPVARNDQVTIAADYRPAAGMRLGLQAYQRALHG"
     gene            1681..2739
                     /locus_tag="VGA78_18425"
     CDS             1681..2739
                     /locus_tag="VGA78_18425"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9895914.1"
                     /translation="MLLQDYPPAAGSHRRGKPGDVPRRGICAFIAPDGVTPLVSGNSI
                     VVVGDSSVLVIDTGQFPSMARHQISEIRRLTPKPVRYIVNTHWHPDHWLGNGEYQKAF
                     PAAVILSTTHTRDEMRGRAMRFITPKSAADTRDAVVKMVDAGKRADGTPYSEIEKQYY
                     GAALTQFRTYVTELEQTGITLPTLLFRDEIVLSLGGREAEVKFLGRGNTGGDAVVYLP
                     DTKTLITGDLLVYPFPYGIGSFIGEWIDTMQRLATIDAVAIIPGHGAVQRDGQYIGVV
                     TELLQRLQTQVRAAVADSLSLPDTRKLVDLGRYRSRLCGENPWCQFGFDRNFVRPAVG
                     RAYREAKEGKLRDEGSGP"
     gene            complement(2736..3782)
                     /locus_tag="VGA78_18430"
     CDS             complement(2736..3782)
                     /locus_tag="VGA78_18430"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX9895915.1"
                     /translation="MSRMILVTSQSAAGAGDASPDSAPPTPDHELLDSYSRAVSAAAE
                     RVSPSVVHVAVQLRPASPGRRGRREVGEGSGSGFVFTPDGLILTNSHVVHRSASVHVS
                     LPDGGRYEADLVGDDPGTDLAVLRISAGSLPAIELGNSAALRPGHLVVAIGNPLGFDA
                     TVTAGVVSALGRTMRAVNGRLIDQVIQTDAALNPGNSGGPLINSRGQVVGVNTAVVLG
                     AQGICFAIPSNTVHWVVPQLIRDGRVRRSWLGIVAQTVNFPRAAAHRAQLALQSGVLI
                     TEVEEGGPAERAGLRPRDVIVGIAEAAVAGVDDLHRVLTAALIDRETVVAILRGTEQQ
                     VVRVVPSDADRVVT"
     gene            3929..4321
                     /locus_tag="VGA78_18435"
     CDS             3929..4321
                     /locus_tag="VGA78_18435"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX9895916.1"
                     /translation="MTRRVQAGAIAFRSRGAQPEFLLVTRKNSHQEWLFPKGNVKTDD
                     SLEETALKELREEAGVEGVIVDRVGTITVKMGGERVEVTYFLVHSGFSRPNGEGRKIR
                     WLTQAEAEPLLNNGKAVNLLRRAARRLS"
     gene            complement(4318..6069)
                     /locus_tag="VGA78_18440"
     CDS             complement(4318..6069)
                     /locus_tag="VGA78_18440"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX9895917.1"
                     /translation="MKANDNRVPAGRLAGDSLVIALEVEYARWYPEAEGGPSVEVAAF
                     QEVGKPPQIPGPLIRVRTGTTIVATIRNGLPDSALTVYGFATRPGFRGRGFRLEPGDR
                     QTVRFSAGEPGTYLYWAVPGAVDTSGGRASFAEREQLAGAFIVDPPGGSPPDRVFVIN
                     IWGEPIDTTGYRNALAINGKSWPHTEPLTATVGDSIRWRVINATVREHPMHLHGVYFR
                     VDSKGTALADTTYDPSVRRLVVTEVLSPSQTMSMVWRPDRPGNWLFHCHLMFHAVQFA
                     RLNYTDHDTHSSDAGKHMAGLVLGIEAKPKPNQPAEARLEPRQMRLHVLKGPPRGRAR
                     HAMSFVLEREGRAPAVDSVENPGSLLVLTRGQPTDITVINRMLEATSVHWHGIELESW
                     SDGVPGWSGLGQRRAPAIAPGDSFTARLTLPRAGTFMYHTHLNDIEQVTSGLYGPIIV
                     LEPGQRYDPGTDHVFLVSWTGEGEPPRILVNGDSVTRTLKLRAGVKHRFRFINISPAI
                     GPRFFLMRDSTQQSWRPVAKDGADLPANQALPRPAMVGANVGEIYDVEWMPEAPGEYT
                     LRTGRRREIVAYRFLVD"
     gene            complement(6321..>8655)
                     /locus_tag="VGA78_18445"
     CDS             complement(6321..>8655)
                     /locus_tag="VGA78_18445"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX9895918.1"
                     /translation="ATVLSVANVLLVRAPAGVLDPGPLITAHAVSEDGSGFHSFSWLD
                     WRDLAAAPSGLEDLAVYSGFPASIATDDEPRLRLGMLVSGNYFRMLRTQPALGRFFGP
                     DEDAGPGGPRVVVLSHTEWRDRFAGDPGILGRSIRVNGEPFTVIGVAEAGFRGHSGLL
                     EVSLFVPVTLDPVVSHRQILEVRNSGWLEMVGRRGPGVSLERAEAALSTNYAATGRAA
                     GRDWDRAVDLREWAPVEAPIVGPVTGFLGLLLVLAGLILLIASANVANVLLARAAARA
                     REIAVRLAIGANRSRLVRQLLTESVVLFAVGGVGGTLLAIWATGLLSGLRPPVGIPLL
                     LEFPLDIRVLLIALAVTLTVGLLFGLVPALQSTRPDLSIALKEQPSLARVGRFRLRTA
                     FVAAQVGGTTLLLVVAGLFVRALGRAGDIDIGFEPANVHALLFELEVRYPDAAQAPAL
                     VERMEERLGMVPGVLGVGAVRNVPLTRSRSETVIAIEGRAAEPGVGWFQTDFSQVTPG
                     YFAVAGVPILKGRGFGPADREGAAAVAIVNQTLAGRVWPGEEVVGKVFRFGSVEDGTP
                     TTIIGVARNAKYNSLGEDPVSMVYVPFAQQPERSIALLAQLAPGSPDPTPAMAAAVRE
                     VDQFLPIVQNAPLTELIGLALLPNRMAVVVATLFGATGLTLAAVGLYGLLAFVVSRRR
                     REIGIRMALGATAGRVRNMILRDGMKPVLLGLGLGFLAAAMLARLLGSLLYGLSPLDP
                     MTYGTIALLLTGVALAASLVPARRATVGDPVDVLRHD"
BASE COUNT         1529 a         2975 c         2887 g         1264 t
ORIGIN      
        1 gtccgtgcag cgcgcgctgg tacgcttgca ggccgagccg catgccggcg gccggacggt
       61 aatcggcggc gatcgtcacc tggtcgtttc gcgcgaccgg aatgcccggt gcccctgccc
      121 ccagatagag gtccaccggg aacacgcttc ccaccaccga ctccgggttg cggagcgact
      181 gcgcgaactg gtgcgaccgc cccaggctgc ctgacacccc gacccgcgcc gtgggctgcc
      241 accgcaactg cacggctgga ctcgagtaga acgtcccgtc ggtttcggcc agagacgccc
      301 ccagcgtgag gatgaaccgg cgcagactcc gcacgtgctg caggaatccg gcggcgagcg
      361 gcgtccgggc atccagggac agatccggag ccgagtcgga cgcgacctgg tacgtcgtct
      421 cgctccgatg gaagcggacc cccagggtgg agaagctgcc ggccgagctg tgatcgaccg
      481 cggccagcag cccctggtcg cgccggctcc atcccagccc ggcgcggccc gcttccgcgg
      541 tccaggtgga cttggcatcc ccactcgcgg tccagccggt caatcgcatg ctgtatcgcc
      601 tgaccacccg gctccattcg acgccgaggg aacgactggt ccactcgaaa ctgttacggg
      661 ggttttcacc cggtacgtcc cccgcggtcg cgcgggcggc gctggtgatc tcgttcccgc
      721 tgccgtatcc gaggagtcgg atcctgccgc gccaaagcgg cgcttccagc ttggccagcc
      781 agtcacccga ctctccgccc aggtacgagg cctcgtcctt cgaggcgagg agaccgggat
      841 aggccgaacg gagactgagc aggtagccgg caccgcccga gccggccggg ccatcgacgg
      901 tgagtcgcgt ctgggtggtc gtggcgccgc cctgaagctg cagccgcgac ccgggtgccc
      961 gggtggcggc ggcaatggtg cctgacaacg cgtccggata ggccggtgac gatgcggtgg
     1021 accagagctc gacctgagcc agcgcgtcgg ggttccaggc gctgaacagc gccgccgcgt
     1081 gatacggact cagcaccgga attccgtcca gcaggtaccc ggtctgatcc gccgctccgc
     1141 cccggatgtg aaccccggtg ggggactcgg gccggagccc gacctcacca ccgctcaagg
     1201 cctgaaaaac gtcgggctcc gccaggagcg gatggttgcg caccgccgtc agcgaagcgg
     1261 cccgatcggg cgaggcgaga ccggacatcg gctcgagccc gcgcacgatg acctgaggcc
     1321 gaacttcgat tccgggaagg cggagcggat cgggatgcag cgagacgttg atctcgagct
     1381 tgccaacccg cggcaccagc gcatgcaggg tccggggggc gtacccgaga taccgtacgg
     1441 tgatgtgctg cggtccgggc gggacctggg acagggcata gcgcccgtcg gcgccggtga
     1501 ccgcgagccg attgagatcg ggcaacgcca cgacggcatt ggcgagggcc ttgcccgtca
     1561 cgtcgtcgcg cacgcttccg gccagcgtgg cttcagccgc ctgtgccgca agcagtaacc
     1621 ggaccgcacc cagcaggaag ggccccatga ggactcctgg cggcgaacgc cgcctggccc
     1681 atgctcctgc aagattaccc tccggcggct ggaagtcacc gccgggggaa accaggggac
     1741 gttcctcgcc gtggcatctg tgccttcatc gcgcccgacg gggtcacgcc cctcgtgtcg
     1801 gggaactcga tcgtagtggt gggcgacagc agcgtcctgg tcatcgatac cggccagttt
     1861 ccctcgatgg cgcggcacca gatctcagag atccggcgcc tgacccccaa gccggtccgc
     1921 tacatcgtca atacccactg gcaccccgac cactggctcg gcaacggcga gtatcagaag
     1981 gcctttccgg ccgcggtgat cctcagcaca acccacactc gggatgagat gcggggccgg
     2041 gcgatgcggt tcatcacgcc caagtccgcc gccgacacgc gtgacgccgt ggtgaagatg
     2101 gtcgacgccg ggaagcgagc cgatgggaca ccgtacagtg agatcgagaa acagtattac
     2161 ggcgcggccc tgacccagtt caggacgtat gtgaccgagc tggagcagac cggaattacg
     2221 cttcccaccc tgctgttccg ggacgagatc gtgttgtcac tgggcgggcg ggaggcggag
     2281 gtgaagttcc tgggccgggg caacaccggt ggtgatgcag tggtgtatct gcccgacacg
     2341 aagaccctga tcacaggcga cctcctggtc tacccgtttc catacggcat cggctcgttc
     2401 atcggcgagt ggatcgatac catgcaacga ctcgcgacca tcgacgccgt ggccatcatc
     2461 ccggggcacg gtgcggtcca gcgcgacggg cagtacatcg gcgtggtaac cgagctgctg
     2521 cagagactgc agacccaggt cagggccgcc gtggccgaca gcctctcgct tccggatacc
     2581 cgcaaactgg tcgatctagg ccggtaccgg tcccggttgt gcggcgagaa cccgtggtgc
     2641 cagttcggct tcgaccgcaa cttcgtccgc ccggcggtgg ggcgagctta ccgcgaggcc
     2701 aaggaaggca aactcaggga cgaagggtcg ggcccctagg tcacaacccg gtcggcgtca
     2761 ctcggcacga cccgcaccac ctgctgttcc gtgccccgga ggatcgcgac tacggtttcc
     2821 cggtcgatca gcgcggcggt cagcacccga tggaggtcgt ccactccggc caccgccgct
     2881 tccgctattc cgacgatcac gtcccggggg cgaagcccgg ctcgttcggc ggggccgcct
     2941 tcctccacct ccgtgatcag gaccccgctc tggagcgcca gctgggcccg gtgagccgcg
     3001 gcccggggga aattgactgt ctgggccacg atgccgagcc agctgcggcg gacccggccg
     3061 tcgcgaataa gctggggcac gacccaatgc accgtgttgg atgggatggc gaaacagatc
     3121 ccctgggccc ccaggaccac cgcggtgttc acccccacca cctggcctcg cgagttgatg
     3181 agggggccgc ccgagtttcc cggattgagc gccgcatcgg tctgaatgac ctggtcgatg
     3241 agccggccat tgacggcccg catggtccgt cccagagcgc tcaccacccc ggcggtcacc
     3301 gtggcatcga agcccagggg attcccgatc gccaccacca ggtggcccgg ccggagggcg
     3361 gccgagtttc ccagctcgat cgccggtagc gagccggcgg agatgcgaag gacggcgaga
     3421 tcggttccgg gatcgtcccc caccagatcg gcctcgtagc ggcctccgtc cggcagcgac
     3481 acgtggacac tcgccgagcg gtggactacg tgactgttgg tgaggatcag tccgtcggga
     3541 gtgaagacga agccggaccc gctcccctcc cccacctccc tcctcccccg tcgacccgga
     3601 ctcgcgggcc gaagttgaac cgcgacatga acgacggaag gactgacccg ctcggcggcg
     3661 gcggagactg cgcgggagta gctatccaac agctcgtggt cgggagtcgg cggggccgaa
     3721 tcgggggaag cgtcgccggc gccggcagcg gattggctgg ttaccagtat cattctgctc
     3781 atgacttcct gctcttcagg gacggatcac cgttctactg aaaaccgcgg cgggccgctc
     3841 ccggttcccg ctgggatccc gggaccagtt gcttcgcgcc gcgagggagg cagatttagt
     3901 cgtatgatcg aggggagcgg tatctgacgt gacccgaaga gttcaggccg gagcgatcgc
     3961 cttccgatcc cggggcgcgc aaccggaatt cctgctggtc acccggaaga actcgcacca
     4021 ggagtggctc ttccccaaag ggaacgtcaa gaccgacgat tccctggagg agaccgccct
     4081 caaggaactg cgggaggagg ccggggtcga aggtgtgatc gtggaccgag tgggcacgat
     4141 cacggtgaag atgggcggtg aacgggtcga ggtgacctat ttcctggtgc acagcggctt
     4201 cagccggccc aacggcgagg gccgcaagat ccgctggctc actcaggcag aggcggagcc
     4261 gctcctcaac aacggcaagg cggtcaacct gctgcgccgg gcggcgagac gactctctta
     4321 gtccaccagg aaccggtagg ccacgatctc ccgtctgcgt ccggtcctga gcgtgtattc
     4381 ccccggagcc tcaggcatcc actccacatc gtagatctcg cctacattgg cgcccaccat
     4441 tgccggccgg ggcagggcct ggttggccgg aaggtcggcg ccgtccttgg cgacgggccg
     4501 ccagctttgc tgggttgagt cgcgcatcag gaagaaccgg ggcccaatgg ccggagagat
     4561 attgatgaac cggaaccggt gtttcacccc ggccctgagc ttcagggtgc gggtaacgga
     4621 atctccgttc accaggattc ggggcggctc gccttccccg gtccaggaca ccaggaagac
     4681 gtgatcggtc ccggggtcgt accgctgccc cggctcgagc acgatgatgg gaccgtagag
     4741 ccccgacgta acctgctcga tatcgttgag atgggtgtga tacatgaagg tgccggcccg
     4801 cggcagcgtg agccgggcgg tgaacgagtc ccccggcgcg atggccggcg cccgccgctg
     4861 cccgaggccg ctccagcccg ggaccccgtc ggaccagctc tccagctcga taccatgcca
     4921 gtgcaccgag gtggcctcga gcatccggtt gattacggtg atgtcggtgg gctggccgcg
     4981 ggtgagcacc agtagcgatc ccggattctc caccgaatcg accgcgggag ccctgccctc
     5041 gcgttccagc acaaagctca tggcgtggcg ggcgcggccc cgcggcgggc ccttgagtac
     5101 gtgcaaccgc atctgccgcg gctcgagccg ggcctcggcc ggctggttcg gctttggctt
     5161 ggcctcgatg ccgaggacca ggccggccat gtgcttgccg gcgtcggaag aatgggtgtc
     5221 gtggtcggtg tagttgagcc gcgcaaactg gaccgcgtgg aacatcaggt gacagtgaaa
     5281 cagccaattg cctggccgat cgggacgcca gaccatcgac atcgtctgcg aggggctcaa
     5341 cacctcggtc accaccaggc gccggaccga tgggtcgtac gtcgtgtcgg ccaaggcggt
     5401 ccccttgctg tccacccgga agtacacccc gtgaagatgc atcgggtgtt cccgcaccgt
     5461 ggcgttgatg acccgccacc ggatcgaatc ccctaccgtc gcggtgagcg gctcggtgtg
     5521 gggccaggac ttcccgttga tggcgagtgc attccggtag ccggtcgtat cgatcggctc
     5581 gccccagata ttgatcacga atacccgatc gggcggggac ccaccgggcg ggtcgacgat
     5641 gaaggccccg gccagctgct cgcgctcggc gaatgacgcc cgtcctccgg aggtatccac
     5701 cgcgcccggg acagcccagt acaagtaggt cccaggctct ccggcggaga accgaaccgt
     5761 ctggcgatcc ccgggctcca ggcgaaaacc gcgaccccgg aagccgggtc gggtggcaaa
     5821 gccgtagacg gtaagcgccg aatcgggcag gccgttccgg atagtggcaa cgatggtggt
     5881 cccggtgcga acccggatca atggacccgg gatctggggc ggcttcccca cctcttgaaa
     5941 ggcggccacc tcgacggaag gccctccttc ggcctcggga taccaccggg cgtattcgac
     6001 ctcgagcgcg atcacgagcg aatcccccgc cagccggccg gcgggcaccc ggttgtcgtt
     6061 ggccttcact attggggggg aggtgcgaaa cgcgacagcc gcaagggccg cagcggcaaa
     6121 aaaagggata agaatcctgg ggattcgcat ggtccgccga atgggatggg ggtgccggaa
     6181 aaggcgtact caagatcaga caaacggggg ggcaaaacaa gtgcttagga ctaagtgctt
     6241 aggactaagt acagtatgtg gccctcactt agtcctcagt ccttcgtcct gagacctgtc
     6301 ggttcagtag gcctgtcagt tcagtcatgc ctcagcacgt ccaccggatc ccccaccgtc
     6361 gcccgccggg cgggcaccag gctggccgcc agcgccacgc cggtcagcaa cagcgcgata
     6421 gtgccgtagg tcatcggatc gagcgggctc aggccgtaca gcagcgagcc cagcagccgg
     6481 gccagcatcg ccgcggccag gaacccgagc cccagcccga gcagcaccgg cttcatcccg
     6541 tcgcgcagga tcatgttccg gacccgtccg gcggtcgccc ccagggccat gcgaataccg
     6601 atctcgcggc ggcggcggct caccacgaac gcaagcaatc catagagccc caccgccgcc
     6661 agagtcagac cggtcgcccc gaagagcgtc gccacaacga cggccatcct gttaggcagg
     6721 agggccaggc cgatgagctc ggtcaggggg gcgttctgca cgatcggcag gaactggtct
     6781 acttcccgga ccgcggctgc catcgccggg gtcggatcgg gcgagccggg agccagctgc
     6841 gccaggagcg cgatggaccg ttccggttgc tgcgcgaagg gcacatacac catcgacacc
     6901 ggatcctcgc ccagcgagtt gtacttggcg ttgcgggcca ccccgatgat ggtggtgggc
     6961 gtcccgtcct ccacgctgcc gaagcggaag accttcccaa ctacttcctc gcccggccag
     7021 acccgccccg ccagcgtctg gttgacgatc gccaccgcgg cggccccctc gcgatcggcc
     7081 ggcccgaacc cgcgcccctt gagaatcggc accccggcaa cggcgaagta gcccggggtc
     7141 acttggctga agtcggtctg gaaccagccg acaccgggct cggccgcccg gccttcgatc
     7201 gcgatgacgg tctccgagcg ggaacgggtc agcggcacat tccgcacggc tcccacgccg
     7261 agcacacccg gcaccatccc caatcgctct tccatccgtt ccaccagggc cggcgcctga
     7321 gcggcatccg gatagcggac ctcgagctcg aacagaagcg cgtgcacgtt ggccggctcg
     7381 aacccgatat cgatgtcacc cgcgcgtccc agcgcacgca cgaaaagccc cgcaaccacc
     7441 agcaacagcg tggtgccccc cacctgggcg gccacgaacg cggtgcgcag gcggaaccgg
     7501 ccgacccggg ccagcgatgg ctgctccttg agggcaatgc tcagatcggg ccgggtggac
     7561 tgcagcgccg gcaccagccc aaacaacagc ccgaccgtca gcgtgaccgc gagagcgatc
     7621 agcaggaccc gaatatccag gggaaactcg agcagcagcg gaatgccgac cggcggccgg
     7681 aggcccgaga gcaggccggt cgcccagatg gccagcagcg tgcctcccac acctcctacc
     7741 gcaaacaaga cgactgattc cgtgagcaac tgccgcacca gccgggaccg gttggcaccg
     7801 atggcgagtc gcaccgcgat ctcgcgggct cgggccgcag ctcgggccag cagcacattc
     7861 gctacgttgg cgctggcaat cagcagaatc agaccggcta gcaccagcag cagacccagg
     7921 aagccggtga ctggaccaac tatcggagcc tcgaccggag cccattcacg cagatcgacg
     7981 gcgcggtccc aatcgcgtcc cgccgcgcga ccggtagctg cgtagttggt gctgagcgcg
     8041 gcctcggctc gttccaagga aacaccgggg ccacggcgcc cgaccatctc cagccatccg
     8101 ctgtttcgta cctcgaggat ctgccggtgc gagaccaccg gatccagcgt caccgggacg
     8161 aacagcgaca cctccaacaa cccggagtgg ccccggaatc ccgcctccgc cacgccgatg
     8221 accgtgaacg gctcgccgtt cacccggatg ctccggccca gaatgccggg atcgcctgcg
     8281 aagcgatccc gccactccgt gtggctcagc acaacgaccc ggggaccacc cggcccggcg
     8341 tcctcgtcgg gaccgaagaa ccgtcccaga gcgggctggg tgcggagcat gcggaaataa
     8401 ttccccgaga ccagcatccc caggcgcagc ctcggctcat catcagtggc gatgctggct
     8461 ggaaatccgc tatagaccgc gaggtcctca aggccgctcg gtgccgcagc caggtcccgc
     8521 caatccagcc aggaaaacga atgaaagccg gagccgtcct ccgagacggc atgggcggtg
     8581 atcaaaggtc ccgggtcaag gactccggcg ggggctcgga ccagcagcac attcgcgacg
     8641 ctcagcaccg tggcc
//
LOCUS       DASWKS010000645         3626 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_2576099, whole genome shotgun sequence.
ACCESSION   DASWKS010000645 DASWKS010000000
VERSION     DASWKS010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3626
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2576099"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..656)
                     /locus_tag="VGA78_18450"
     CDS             complement(108..656)
                     /locus_tag="VGA78_18450"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX9895919.1"
                     /translation="MQSKAEQHREYEQFRRIDAAFKTGDLAALRAAVDDRANVPNGPM
                     PLAIGPCLEYAIYHSPLRFIRALLELGAEPNPAQHIGFPPLIAALSCSRSQPGSPARP
                     DVPEIIALLLEFGADPNQRGINDYTPLHMAVAERNQDALRLLLEAGADPRLKTRIDDC
                     ETPGEMAREAGLTEMADLIAGY"
     gene            766..>3626
                     /locus_tag="VGA78_18455"
     CDS             766..>3626
                     /locus_tag="VGA78_18455"
                     /inference="COORDINATES: protein motif:HMM:NF026036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX9895920.1"
                     /translation="MRSAALSTPALIGLVAALATNDALAQSTRLLRQPTLSARQVAFA
                     YAGDIWVVDRTGGLARRLTSMPGAESFPRFSPDGSQIAFSSVVAGNVDVYVVPTEGGD
                     PRRLTWHPEEDEVRGWTPDGKRVVFMSQRTSAPRAYGGSPRFWTVGTEGGLPQVMPMP
                     RAYQGNHSPDGKRFAYVQLAPMDKEWRNYRGGQVRPIWVLDLSTYALETLPWKDSRDL
                     DPVWVGNTIYFISDRDFAGNIYGYNTGTKELKQLTTYGDYDVKTLGAGPGAVVYEQAG
                     YIHLLDAATGQSRRLDITVKGDLPHTIARWDDVGDMLQNASLSPTGRLALFEARGEVF
                     TVPTDKPDWRNLTNSSGAAERSPIWSPDGRSIAWFSDASGEYQLMVADQSGAEKPRAI
                     PLEKPTFYYAPSWSPDGKHLAYTDVDRRLWLLDLATGRARVADQDSASHPGTAWDRAA
                     WSPDSRWLAYTKRLDNGFLAVTLYSLESGRQHRVTDGMADVIAPAWDASGKYLWFLAS
                     TNYGLNSQWLDMSRNERPIERGLYLVVLSANEPSPLLPVVEREPGTATNAPAPAEPAI
                     ADSARAQPRPAAAGADPIRRTPGPVRIDLEGLDRRVLAVNVPLRDYLSLSAGPPGVVF
                     YLERITGQRPTLRRYDLGGREAKDFLTGITSYTVSADGKKLLYQVPGSWGVVATSGAS
                     KVGDGRIETGFRMQIDPRQEWRQIFREAWRFERDFFYARNLHGADWDAVWKMYEPLAQ
                     HVGHRSDLTYVLDMVGGELSVGHSFSNDPPLRERDIVRVGLLGADFEETNGRYRIARI
                     YTGESWNPELRAPLAAPGLNLREGDYLLEVNGRELRPPTSPYSLFEGTAGKQTLLRVN
                     DRPALEGSRVVTVVPVESEYQLRLRAWVEANRRKVDQMSKGRLAYVYLPNTGAGTNGG
                     YGYFTRYYFAQQDKPGVVLDERDNGGGQAADFMVQIMDR"
BASE COUNT          599 a         1233 c         1226 g          568 t
ORIGIN      
        1 ctcaacccca cgtagaacaa ggcacctggc accgcacccc agcaccgcac ggggtacctg
       61 gcacccggaa ccgggagcgc gtccttattc ctgagcgaag ccaaggatca gtaccccgcg
      121 atcaggtccg ccatctccgt cagtcccgcc tcccgggcca tctcccccgg ggtctcacag
      181 tcatcgattc gggtcttgag ccgcggatcg gcgccggcct cgagcaggag tcttaaggcg
      241 tcttgattgc gttcggcgac ggccatgtgc agcggggtgt aatcgttgat gccccgctgg
      301 ttggggtcgg ctccgaattc cagcaggagg gcgatgatct ccggtacgtc cggccgagcc
      361 ggagatccgg gctgcgatcg gctgcaggat aatgccgcga tcaggggtgg gaacccgatg
      421 tgctgggccg gattgggctc ggcgcccagc tccagcagcg cccgaatgaa ccggagcggg
      481 ctatggtaga tggcgtattc caggcaagga ccgatggcga gcggcatggg cccgttaggc
      541 acgttcgccc ggtcgtccac cgcggcgcgc agggcggcca gatcgccggt cttgaatgcc
      601 gcgtcgatcc gcctgaattg ctcgtactcc cggtgctgtt cggccttcga ctgcatggat
      661 catcgctacg gtcagggacc ggcttatgtt tcgaggttgt ccgaaggccc gtatgactct
      721 tcgaccgacc catctcagag ccactccccc acaggcagga acctcatgcg ctccgctgcc
      781 ctttcaacgc ccgccctgat cggcctcgtg gccgcgctcg ccacgaacga tgcgctcgcc
      841 cagagcaccc ggctcctgcg gcaacccacc ctcagcgccc gccaggtcgc cttcgcctac
      901 gccggcgata tctgggtggt ggaccggacc gggggcctgg cccgccgcct gaccagcatg
      961 ccgggtgccg agagtttccc ccgcttttcg cccgatggga gccagatcgc cttcagcagc
     1021 gtggtagccg gcaacgtcga tgtctacgtg gtgccgaccg agggcggcga tcccaggcgt
     1081 ctcacctggc acccggagga agacgaggtg cgcggctgga cccccgacgg caaacgggtg
     1141 gtcttcatgt cgcagcggac ctcggcgcct cgagcctacg gcggctcgcc ccggttctgg
     1201 accgtcggca ccgagggcgg cctgccgcag gtgatgccca tgccgcgggc ctaccagggc
     1261 aaccactcgc ccgacggaaa gcggttcgcc tacgtgcagc tcgcccccat ggacaaggag
     1321 tggcgcaact atcgcggggg ccaggtgcgg cccatctggg tgctggatct ctcgacctac
     1381 gcgctcgaaa cgctgccgtg gaaggacagc cgggatctgg acccggtctg ggtcggcaac
     1441 accatctact tcatctcgga tcgcgatttc gccggcaaca tctacggcta caacaccggg
     1501 accaaagagc tcaagcagct caccacctat ggcgactacg atgtcaagac gttaggcgcc
     1561 gggccgggcg cagtggtgta cgagcaggcg ggctacatcc acctgctgga cgccgccacc
     1621 ggccagagcc ggcggctcga catcacggtc aagggcgatc taccgcatac gatcgctcgc
     1681 tgggacgatg tcggtgacat gctgcagaac gcctcgctgt cgccgaccgg gcggctggcg
     1741 ctgttcgagg cgcgcggaga ggtcttcacg gtcccgaccg acaagcccga ctggcgcaac
     1801 ctcaccaaca gctccggtgc cgcggagcgg agcccgatct ggtcgccgga cggacggtcc
     1861 atcgcctggt tttccgatgc ctcgggcgaa taccagctca tggtcgcgga tcagagtggg
     1921 gccgagaagc cccgcgccat cccgctggag aagccgacct tctattacgc gccatcctgg
     1981 tcgccggacg ggaaacacct ggcctacacc gatgtcgatc gccggctctg gttgctcgac
     2041 ctggcgaccg gccgggcccg ggtcgccgac caggattccg cgtcccatcc cggcacggcg
     2101 tgggaccggg cggcctggtc gcccgacagc cgctggctgg cttataccaa gcggctggac
     2161 aatggattcc tggcggtgac gctctactcg ctcgaatcag gccggcagca tcgggtcacc
     2221 gatggcatgg cggatgtcat cgcccccgcc tgggatgcga gcggcaagta cctctggttc
     2281 ctggcgagca ccaactatgg gctcaacagc cagtggctcg atatgagccg caacgagcgg
     2341 cccatcgagc gcgggctcta cctcgtggtg ttgagcgcca acgagccgtc gcccctcctg
     2401 ccggtggtgg agcgcgagcc cggtacggcg accaacgccc cggcgccggc cgagcccgcc
     2461 atcgccgaca gcgcgcgggc gcaacccaga ccggcggccg ccggcgcgga cccgatccgg
     2521 cggacgccgg gaccggtgcg gatcgatctc gagggtctcg accggcgggt gctcgcggtg
     2581 aatgtgccgc tcagggacta tctgtccctc tccgcgggac ccccgggagt ggtgttctac
     2641 ctggagcgga tcaccggcca gcggcccacg ctccgccgtt acgacctggg aggccgggag
     2701 gccaaggact tcctcaccgg catcacgagc tacaccgtgt cggccgacgg gaagaagctg
     2761 ctgtaccagg tccccgggtc gtggggcgtg gtggcgacct cgggagcgtc gaaggtgggc
     2821 gacggcagga tcgagaccgg gttccggatg cagatcgatc cgcggcagga atggcgccag
     2881 atcttccgcg aggcctggcg cttcgagcgc gacttcttct acgccaggaa cctgcacggc
     2941 gccgattggg acgcggtctg gaagatgtat gagccgctgg cccagcacgt ggggcaccgg
     3001 tccgacctca cctacgtgct cgacatggtg ggcggtgagc tttcggtggg acactcgttc
     3061 tccaacgacc cgccgctacg ggaacgcgac atagtccgag tcggtctcct gggcgcggat
     3121 ttcgaggaaa ccaacggccg ctaccgcatc gcgcggatct acaccggtga gagctggaac
     3181 ccggagctca gggcaccact cgccgcgccc ggcctgaacc tgcgcgaagg ggactatctg
     3241 ctggaggtga acggccgcga gctccggccg cccaccagtc cctacagttt gttcgagggg
     3301 acggccggca aacagaccct gctccgggtg aacgatcggc ccgcgctgga gggttcgcgg
     3361 gtggtgaccg tggttccggt cgagagcgaa taccagctcc ggctgcgagc ctgggtcgag
     3421 gccaaccgcc gcaaggtgga ccagatgtcg aagggccggc tggcgtacgt gtacctgcct
     3481 aacaccggcg ccgggaccaa cggcggctac ggctatttca cccgctatta cttcgcccag
     3541 caggacaagc ccggcgtggt gctggacgag cgcgacaacg ggggcggcca ggcggcggat
     3601 ttcatggtcc agatcatgga tcggaa
//
LOCUS       DASWKS010000646         2384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1470846, whole genome shotgun sequence.
ACCESSION   DASWKS010000646 DASWKS010000000
VERSION     DASWKS010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470846"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VGA78_18460"
     CDS             <1..573
                     /locus_tag="VGA78_18460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX9895921.1"
                     /translation="PIVVASQIVLGLQTIPSRQVDVTKVPAIVTVGMIQGGNRGNIIP
                     DSVVLQGTVRTFDEAMRADIKERIRRTVDLIAQSAGATATVDFGRGNNPVTFNDPGLT
                     ERMLPTLKRVVGDSNVRVSDLSTPAEDFALYQQRIPGLFFFLGITPKDKDPKTVPRNH
                     SPYFFADEAALPIGVKVLANLAVDYLSGKQ"
     gene            598..2154
                     /locus_tag="VGA78_18465"
     CDS             598..2154
                     /locus_tag="VGA78_18465"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895922.1"
                     /translation="MNREPLKRLGLAALAAAGFVGCGKSRPEPATVIANVLLFDGSGG
                     EPFVTSVRIIGDRIDAIGDEAGAKPDQWFIDGAGLALAPGFIDTHSHADYQLEQHRDA
                     LGAVSQGITTVVVGQDGGSPSPLGDFFARLDSAPAAVNIAAYSGHNTLRHQVLGEDFR
                     RAATQVEVDSMKLLLLADFDAGGLGLSTGLEYDPGIYSSRREVLDLAAAVGAEGGRYI
                     SHIRSEDRAFWDAIDEAIAIGREARLPVQISHLKLAMRSLWGRADSLLGVLDAARQEG
                     IEITADVYPYTYWQSTLTVLFPERNYRDRSAAEFALREVAAPGGLLLGRFAPNSTYVG
                     RTLADIARQRRTDPATTLMGLIAEAEAFKAAQPAVEDVESVIGISMDERDVERLLAWP
                     YANICTDGELAGRHPRGFGAFPKVLGVYARQRRAFSTAEAVRKMTSLPARNMGIRDRG
                     VVRAGGFADLVLLDTLAVLDNATTAEPQRTASGIRRVWVNGQVVYEDGKVTGRYPGRP
                     LRRGQTQTPD"
     gene            2169..>2384
                     /locus_tag="VGA78_18470"
     CDS             2169..>2384
                     /locus_tag="VGA78_18470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895923.1"
                     /translation="MQTRKPPRPRKPFRLTRRPVTIRLGKRLRGGAARASLDPIEIAS
                     RDEIAALQLKRLRWTLRHVWDHVPHYRR"
BASE COUNT          391 a          793 c          820 g          380 t
ORIGIN      
        1 ccgatcgtgg tggcgtccca gatcgtgctc gggctccaga ccattcccag ccgccaggtg
       61 gacgtgacca aggtgccggc gatcgtgacg gtcggaatga tccagggcgg caatcgcggg
      121 aacatcattc ccgacagcgt ggtcctgcag ggcacggtgc gcaccttcga cgaagccatg
      181 cgagccgaca tcaaggagcg gatccgccgt acggtcgacc tcatcgccca gagcgccggc
      241 gccaccgcca cggtggactt cggccgcggc aacaacccgg tgaccttcaa cgatcccggc
      301 ctgaccgagc ggatgcttcc cacgctcaag cgggtggtgg gcgacagcaa cgtgcgggtc
      361 agcgatctct ccacccccgc cgaagacttt gcgctctacc agcagcggat tccgggcctg
      421 ttcttcttcc tcggcatcac ccccaaggac aaggacccga agaccgttcc ccgcaaccac
      481 tcgccttatt tctttgccga cgaggccgcc ctgccgatcg gggtgaaggt tctggcgaat
      541 ctggcggtcg actacctctc cggtaaacag tgaacagtga acagtgaacc gtgaaccgtg
      601 aaccgtgaac cgttgaagcg gctgggtctt gccgctctag cggcggccgg cttcgtcggc
      661 tgtggaaaga gccggcccga accggcgacg gtcatcgcca acgtgctcct ttttgacggg
      721 tcgggtggcg agcccttcgt cacctccgtc agaatcatcg gcgatcggat cgacgcgatc
      781 ggggatgaag ccggagccaa gcccgaccag tggttcatcg acggcgccgg actggcgctg
      841 gcccccggat tcatcgatac ccacagtcac gcggactatc agctggagca gcaccgggac
      901 gcgctggggg cggtgagcca gggaatcacc acggtggtgg tgggccagga tggcgggtcg
      961 ccctcgccgc tgggggattt cttcgcccgg ctggactccg cgccggccgc ggtgaacatc
     1021 gcggcctact cgggccacaa cacccttcgt catcaggtgc tgggggagga cttccggcga
     1081 gcggcgacgc aggtcgaagt cgacagcatg aagcttctgc tcctggccga cttcgacgcc
     1141 ggcgggctgg gcctttccac cggtctcgaa tacgacccgg ggatctactc ctcccgccgg
     1201 gaggtgctgg atctggcggc agccgtgggg gcggagggcg gtcgttacat cagccacatc
     1261 cgcagtgaag accgcgcctt ctgggatgcg atcgacgaag cgatcgccat cggccgcgag
     1321 gcccggctgc cggtgcagat ctcgcatctc aagctggcga tgcggagctt gtggggccgg
     1381 gccgattcgc tgttaggtgt gctggacgcg gcccggcagg aggggatcga gattaccgcc
     1441 gatgtgtatc cctataccta ctggcagtcc acgctcacgg tcctgttccc ggagcgtaac
     1501 taccgcgacc ggtcggcggc ggaattcgcg ctccgcgaag tggccgctcc cggaggactg
     1561 ttgctgggcc ggttcgcgcc caattccacc tacgtgggac gaacgctggc cgacatcgcg
     1621 cggcagcggc gtaccgatcc ggccaccacg ctgatgggtc tcatcgccga ggcggaagcg
     1681 ttcaaggcgg cccagccggc ggtggaggac gtcgagagcg tcatcggcat cagcatggac
     1741 gagcgggatg tggagcgcct gctggcctgg ccttacgcca acatctgcac cgacggcgag
     1801 ctggcggggc ggcatccccg cggcttcggc gcttttccca aggtgctcgg agtctacgcc
     1861 cggcagcgcc gcgcgttcag caccgccgaa gcggtgcgca agatgacttc gctcccggcc
     1921 cgaaacatgg ggattcgtga ccgcggggtg gtccgcgccg gcgggtttgc cgacctggtg
     1981 ctgctcgaca cgctggcggt gctggacaat gcgaccacgg ccgaaccgca gcggaccgcg
     2041 agcgggatcc gccgggtctg ggtcaacgga caggtggtct acgaggatgg caaggtcacc
     2101 gggcggtacc cggggcgccc gctccgccgg gggcagactc agacgccgga ctgaccgggg
     2161 gcctccaggt gcagactcgc aaacctcccc ggcccaggaa gccgtttcgc cttacccggc
     2221 ggccggtcac catccggctg gggaaacggc tgcggggcgg cgcggctcgg gccagtctcg
     2281 acccgatcga gatcgccagc cgggatgaga tcgccgctct ccagctcaag cggctgcgct
     2341 ggaccttgag gcatgtctgg gaccatgtcc cccactatcg cagg
//
LOCUS       DASWKS010000647         2615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1472986, whole genome shotgun sequence.
ACCESSION   DASWKS010000647 DASWKS010000000
VERSION     DASWKS010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472986"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2615
                     /locus_tag="VGA78_18475"
     CDS             <1..>2615
                     /locus_tag="VGA78_18475"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX9895924.1"
                     /translation="IRREPFHPARSIALIVALAASGSAVAPAQQLDTARTLALDPAVR
                     HGRLDNGLHFYVRVNSQPERRAELRLVVNAGSVLEDDDQRGLAHFVEHMAFNGTARFA
                     KQALVDFIEGLGMRFGAHLNASTSFDETVYELQVPTDSAPILPRAFDILEDWAHGVSF
                     EPEEVDRERGVVVEEWRLGLGAEARMLDRQLPVLFAGSRYAVRLPIGERRTLETAPRD
                     ALVRFYRDWYRPDLMAVIAVGDFDPDSVEAMIRQRFSRLERREGPRARERFAVPVSDT
                     TLVAVATDPEATNNRVSVAWRVSGTPRGTVGSYREELIGQVHDQMLNLRLEELTRREN
                     PPFIAAGMGRWNMVRTAEVVSLGAVVQDGGLARGLEAAATEVERVRRHGFTAGELERG
                     RQEFLRAYQRAYDERENTPSARLVAEYVNHFLEGEPSPGIEEEYALVQALLPGITLEQ
                     VNVAARLATGDRGRVLLANAPEKPGLAPPDSRALLGVFDRVKGAQVTPYADVVANLPL
                     VPTTPAPGGITRERRDSLLGTVEWTLSNGVRVVLKPTDFKADEVLLGAYSPGGSSLAP
                     DRGYLSSALATTLVGLGGLGAFDETTLRKQLAGRAVQVRPQVAALHEGLGGSASPRDL
                     EVFFQLIYLTMTAPRADTAAFRAFQANARSAIANRSSNPESVFGDTLTAVLTQYHPRT
                     RPITPGAVDSLDLGRAFAFYRDRFADASDFTFVLVGAFTVDAIRPLVERWLGGLPTLK
                     RTERWRDLGIMAPRGVVERTIYKGVEPKSRTQLVFSGPFEYTRANRAAMRGLASVLDI
                     RLREVLREALGGTYGVSVSGTPTRLPRQEYSFSIGFGSAPERVDELVKAVFAEIDSIR
                     KNGPADRDLAKVVET"
BASE COUNT          399 a          845 c          943 g          428 t
ORIGIN      
        1 attcggcgcg agccgttcca cccggcccgt tccatcgccc tgatcgtcgc gcttgccgcc
       61 tccggttccg ccgtcgcccc ggcccagcag ctggacacgg cccgcaccct ggcgctggat
      121 cccgcagtgc gccacggccg gctcgacaac ggtctccatt tctatgtccg ggtgaacagc
      181 cagccggaac ggcgggccga actgcgtctg gtggtgaacg cggggtcggt gctggaggac
      241 gacgaccagc ggggtctggc gcacttcgtc gagcacatgg cgttcaacgg aacggcccgg
      301 ttcgcaaagc aggcgctggt ggatttcatc gaaggactgg gcatgcggtt cggcgcccac
      361 ctcaacgcca gcacctcatt cgacgagacc gtgtacgagc tccaggttcc caccgacagc
      421 gcgcccatcc tgccgcgtgc cttcgacatc ctggaagact gggctcacgg ggtgagcttc
      481 gagccggagg aggtcgatcg cgaacgaggg gtggtggtgg aagagtggcg tctgggattg
      541 ggggcggaag cccggatgct cgaccggcag ctgccggtgc tgttcgcggg ctcgcgctac
      601 gcggtccgac tgccgatcgg ggagcggcgc acgctggaaa ccgccccgcg cgacgcgctg
      661 gtccggttct accgcgactg gtatcggccc gatctcatgg cggtcatcgc ggtgggcgat
      721 ttcgatcccg attccgtgga ggccatgatc cggcagcggt tctcccggct ggaacggcgc
      781 gaggggccgc gggcgcggga gcggttcgcg gtaccggtga gcgataccac gctggtggcg
      841 gtggccaccg atcccgaggc gaccaacaac cgggtttcgg tggcgtggcg ggtttcggga
      901 acgccgcgcg gcacggtggg ctcgtaccgc gaagagctga tcggtcaggt gcacgaccag
      961 atgctcaact tgcggctgga agagctcacc cgacgggaga atcccccctt catcgccgcc
     1021 ggtatgggcc gctggaacat ggtgcgcacg gctgaagtgg tttcgctggg cgccgtggtc
     1081 caggatggcg ggctggcacg gggcctcgaa gcagccgcca ccgaggtgga acgggttcgc
     1141 cgccacgggt tcaccgccgg cgagctggag cgggggcgac aggaattcct gcgggcgtat
     1201 cagcgtgcct atgatgagcg ggagaacacc ccctcagcgc ggctggtggc agaatatgtg
     1261 aatcactttc tcgagggcga gccctcgccc gggatcgagg aagagtatgc cttggtgcag
     1321 gcgctcctgc ccggcattac gctggagcag gtgaacgtcg ccgcccggct cgcaaccggc
     1381 gaccgaggcc gggtgctcct ggccaacgct cctgagaagc ccggactggc cccgcccgac
     1441 agccgagccc tcctcggggt gttcgaccgg gtgaaggggg cgcaagtgac tccctatgcc
     1501 gacgtggtgg cgaatctgcc cctggttccc accaccccgg cgccgggcgg gataacccgg
     1561 gagcggcgcg actcgctgct cggcaccgtg gaatggacat tgtccaacgg agtccgggtg
     1621 gttctcaaac cgaccgactt caaggccgat gaagtgttgc tgggggcgta cagtccgggc
     1681 ggttcgtcgc tggcgccgga tcggggatat ctgagctccg cgctggccac gactctggtg
     1741 gggctgggcg gactgggggc gttcgacgaa accacgctcc ggaagcagct cgcgggccgg
     1801 gcggttcagg tgcggcccca ggtagcggcc ctgcacgagg gactgggcgg tagcgcctca
     1861 ccgcgggacc tggaggtttt tttccagctg atctacctca ccatgacggc gcctcgggcg
     1921 gataccgcgg cattccgtgc ctttcaggcc aacgcccgtt ccgccatcgc caatcgcagc
     1981 tccaatcccg agtcggtctt cggcgacacg ctgaccgcgg tgctgacgca gtaccacccc
     2041 cgcacccggc ccatcacacc cggcgcggtg gactcgctcg acctgggtcg tgccttcgcc
     2101 ttttatcgcg atcgattcgc cgatgcgagc gacttcacgt tcgtcctggt gggtgcgttc
     2161 acggtcgatg cgatccggcc tctggtggag cgatggctgg gtggactgcc gacgctgaaa
     2221 cggaccgagc ggtggcgaga cctgggcatc atggcgcccc gcggggtggt cgagcgtacc
     2281 atctataaag gcgtggagcc caagagcagg acccagctgg tcttctcggg cccgttcgag
     2341 tacacccgtg ccaaccgcgc cgcgatgcgg gggctcgcgt cggtactcga tatccggctg
     2401 cgcgaggtgt tgcgggaggc gctgggcggg acctacggtg tgtcggtgtc gggcacgccg
     2461 acccggctcc cgcgccagga atacagcttc agcatcggct tcggatcggc cccggaacgc
     2521 gtcgacgagc tggtcaaggc cgtgttcgcg gagatcgact cgatccggaa gaacggcccg
     2581 gccgatcggg atctggccaa ggtggtggaa accga
//
LOCUS       DASWKS010000648         7181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3654336, whole genome shotgun sequence.
ACCESSION   DASWKS010000648 DASWKS010000000
VERSION     DASWKS010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3654336"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1405)
                     /locus_tag="VGA78_18480"
     CDS             complement(<1..1405)
                     /locus_tag="VGA78_18480"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX9895925.1"
                     /translation="MSRTSHRSPLLLLAVAAVLTGPAQSQQRRTTPEVSALMRRMTLA
                     EKAAQLVMPWVAGGYTAFDDPGFERIVHLVDSLKVGGIVVSIGSPMDIAARINHLQRK
                     AKLPLLVASDLEGGSAFRVTGGTAFPTNMGVGAGGQEADAYLMGRIIAEEGRAIGVHL
                     TFSPVADVNNNPSNPIINTRSFGGDSRLVARLVEAQVRGTQEHGLLATAKHFPGHGDT
                     GTDSHLAIPVITADWNRIDSLELVPFRAAIGAGVAAVMSAHVALPGLDSGRSRPATMV
                     PEILTGILRDSLGFTGLIVTDALDMAGVVSSYGAGEAAVSALRAGSDILLMPTDPVMA
                     VRAVVSAVEEHRISRARLDSSVRRVLTLKSRMGLFRRRLVNLDSVGYVVGRRAAMEAA
                     AAAARRSLVLLRDSLGLIDSLSAQRRRIAIVSYSETPGNTPGAVLAGALRSRGHLVSI
                     NRLLPASGPASHDSARAA"
     gene            1388..2632
                     /locus_tag="VGA78_18485"
     CDS             1388..2632
                     /locus_tag="VGA78_18485"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HEX9895926.1"
                     /translation="MRGSRHRSVPGLGLLLMVAACRPQPSGPVLPLPVRPGLEVLLTD
                     SLHLVRGRRVGLVSNQSGIDRRGVHGVDRLLAAGVRLVALFSPEHGFRGQAEPGESIA
                     TTTDSATGLPIYSLYGTSMAPSPEVLDGLDVILVDLQDVGARYYTWVATTVEVMRAAW
                     LQNKTVVILDRPNPIGGAVQGNVLDPAYRSAVGKLTVPIRHGLTLGELALLARRELGV
                     ATDVRVVPAAGWSRSVTFERTGLPFRPPSPNLRDLEALFHYPGVCLFEGTALSVGRGS
                     DAPFHQIGAPWLDPVAVLARVHEQPPPGVRLEPVTFTPVHPGDGKYADTALVGIRWVM
                     TDQARYDPVRTAVVLLKAIRDVHPDQIRINPRSFDRLAGGPGLREALEAGLSTDRIVA
                     GWKVPTARFRERAKPVLRYPTK"
     gene            2752..3375
                     /locus_tag="VGA78_18490"
     CDS             2752..3375
                     /locus_tag="VGA78_18490"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX9895927.1"
                     /translation="MQLTAAVQQGYKATTRPLTDWLIRAGVTPNVITSVAALVVMLSA
                     VAFAIGWIRTGGGLLLLSGLLDTLDGDVARAAGKTTRFGAFYDSTLDRLGDGVSFIGI
                     ATFLLTTPGIRFPLVGAIVCMVAVLVSLLVSYARARAEGLGLDCKVGLVQRAERILLI
                     GIPSLFVGAGPDGLVLQAIVGLLALGSTITVVQRFLYVRRITDNGAN"
     gene            3409..4746
                     /locus_tag="VGA78_18495"
     CDS             3409..4746
                     /locus_tag="VGA78_18495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HEX9895928.1"
                     /translation="MTQKFTGRIAPASGKLGILCVGLGAVTTTFMAGVENVRRGRARP
                     FGSLTQLATIRLGKRTEGRSPLVREFVPLADLSNLVFGAWDPIPDSAYHAALKAGVLD
                     KHEHIEPIADFLKGIVPLAAVFDQHYVKRLQGTNVKPGKNKRELAEALRKDIREFKAK
                     HGCDRLVVVWCASTEIFIQPGPTHESLTAFEKAMDTNDPSIAPSMLYAWAALMEDVPF
                     ANGAPNLSCDAPALEQLARQRRVAIGGKDFKTGQTMVKTVLSPMFKARMLGVSGWYST
                     NILGNRDGEVLDDPESFKTKEESKLGVLEYILQPQLYPELYGQLYHKVRINYYPPRGD
                     NKEGWDNIDIFGWLGYPMQIKVDFLCRDSILAAPLVLDLALFFDLAQRAGLHGIQEWL
                     SFYFKSPQTAPGLYPEHDLFIQQTKLKNTLRWLMGEEQITHLGTEYYEYGGEQ"
     gene            4913..5149
                     /locus_tag="VGA78_18500"
     CDS             4913..5149
                     /locus_tag="VGA78_18500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895929.1"
                     /translation="MAFFGARLTPSEELPRRRRFSGMLGELSVTVQAEGGHYTLVTVE
                     TNQPGESELDRLAKQFLGSVHRMAEPDHVLRGAY"
     gene            5153..5773
                     /locus_tag="VGA78_18505"
     CDS             5153..5773
                     /locus_tag="VGA78_18505"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEX9895930.1"
                     /translation="MRLLPRDQKFFDLFTASATFSVQAAGYLIELLQRDEDDRWAVAD
                     TIKQLERQADEVTHEVVTRLDRTFITPLDREDIHLLASRLDDVTDSIDGIARRFQIFK
                     PGPSPEGAVLMAGVVQRAAQQLLDAVRVLGNGRPRTVLASCREVKRLEEEGDGLYHGW
                     LGRLFDETTDPIRLMKWKELYDALERTLDVAEDVSNVLESVAIKHG"
     gene            5776..6804
                     /locus_tag="VGA78_18510"
     CDS             5776..6804
                     /locus_tag="VGA78_18510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX9895931.1"
                     /translation="MDATIPLVLSIIGVALVFDFINGFHDSANSIATVVSTRVLTPAV
                     AVLWAAFFNFIAAFTVGTAVARTISTGLVVPEAVNPTVILAALLGAITWNLITWFFGL
                     PSSSSHALLGGFAGAAVSHYGMSAIIASGWIKPIAAIALSPLLGMGLGLTLYVSIAWL
                     MHRAPPARLDKAFRRMQLVSAALYSLSHGANDAQKTMGIIVSLLVASHSLFAGATGWL
                     GLFDVPNGDHVPLWVVLAAHAAIAGGTAAGGWRIVKTMGTRITKLTPFGGFCAETAGG
                     TTIMLASALGVPVSTTHTITGAIVGVGTSRRTGAVRWGVARQIVWAWILTIPVSALIA
                     GLVFALVG"
     gene            6814..>7181
                     /locus_tag="VGA78_18515"
     CDS             6814..>7181
                     /locus_tag="VGA78_18515"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9895932.1"
                     /translation="MAGTVPATAPSIPAGLNRDQLLELYFYMRLTRSLEERLVNLYRQ
                     TKVIGGLFRSLGQEADAVGSAYALDRTRGDILSPLIRNLGSMLVQGATPLEVLRQYMA
                     KADGPTTGRELNIHFNDLERG"
BASE COUNT         1132 a         2408 c         2391 g         1250 t
ORIGIN      
        1 cagcggcacg cgccgagtcg tgactcgccg gtccgctggc cggcagcagc cggttgatcg
       61 acaccagatg tccgcgggat ctgagcgcac cggccaacac ggcaccgggt gtgttgcccg
      121 gggtttcgct gtaggagacg atcgcgatcc ggcgccgctg agccgagagg ctgtcgataa
      181 ggcccagact atcccgcagc aggaccagcg accggcgggc ggcagccgcg gccgcctcca
      241 tcgcagcacg ccgtcccacg acgtacccca cgctgtccag gttcaccaga cggcggcgga
      301 acaggcccat gcgcgacttg agagtgagta cccgccggac cgagctgtcc aatcgagctc
      361 gggagatccg gtgttcttcc acggcgctga ccacggcgcg cacggccatg acgggatcgg
      421 taggcatgag cagaatgtcg ctgccggctc tgagcgcgct cacggccgct tcgcctgccc
      481 cgtacgagct caccacgccg gccatgtcca gcgcatcggt cacgatgagg ccggtgaatc
      541 ccagcgagtc tcgcaggatg ccggtcagga tctcggggac catggtcgcc ggccggctcc
      601 ggccggagtc caggcccggc agcgcgacat gagccgacat caccgcggcg actcccgccc
      661 cgatggccgc tcggaacggc accagctcca gagagtcgat gcggttccag tccgccgtga
      721 tgacggggat cgcgaggtgc gagtcggtgc cggtgtcgcc gtggccgggg aagtgtttcg
      781 cggtcgctaa caggccgtgc tcctgggtgc cgcgcacttg cgcttccacc agccgcgcca
      841 ccaggcggga gtcccccccg aaggagcggg tgttgatgat ggggttggag gggttgttgt
      901 tgacgtcggc caccggcgaa aacgtcaggt gtactccgat ggctcggccc tcttcggcga
      961 tgatccgtcc catcaggtac gcgtcggcct cctgtccccc cgcgcccaca cccatattgg
     1021 tggggaaggc cgtaccgcca gtcacccgga acgcgctgcc cccttcgagg tccgatgcca
     1081 ccagcagcgg cagcttcgcc ttgcgttgga gatggttgat ccgggccgcg atgtccatcg
     1141 gggagccgat cgatacgacg atgccgccca ccttcagcga atcaaccaga tggacgatgc
     1201 gttcgaaccc ggggtcgtcg aatgcggtgt acccgccggc cacccagggc atcaccagct
     1261 gcgccgcctt ttccgccagc gtcatccgac gcatcagggc cgagacctcg ggcgtggtcc
     1321 ggcgttgttg cgactgggcc ggcccggtga gcaccgcggc caccgccagg agcagaaggg
     1381 gagatcgatg agaggttcga gacaccggag cgttcctgga ctgggcctgt tgctgatggt
     1441 cgccgcatgc cggccccagc cctctggtcc ggtgctgccg ctgccggtcc ggcccgggct
     1501 ggaagtgctg ctcactgaca gcctgcatct ggtgcggggc cggcgtgtgg gcctggtgtc
     1561 gaatcagtcc ggcatcgacc ggcggggggt tcacggtgtc gatcgtctcc tcgccgcagg
     1621 cgtgcgactg gtcgcgctgt tcagtcccga gcatgggttc cggggccagg cggaacccgg
     1681 cgagtcgatc gccacgacca ccgattccgc caccggcctt ccaatctaca gcctctatgg
     1741 aacgagcatg gcgccctcac ccgaggtgct cgacggtctg gacgtcatcc tggtggacct
     1801 gcaggatgtc ggcgcgcggt actacacctg ggtcgcgacc acggtcgaag tgatgcgggc
     1861 cgcctggctg cagaacaaga ccgtcgtgat cctcgatcgg cccaatccca tcggaggtgc
     1921 ggttcagggc aacgtgctgg acccggcgta ccgctccgcg gtcggcaaac tgaccgttcc
     1981 gatccgccac ggcctcaccc tgggtgagct ggcgttattg gcgcggcgag agctgggagt
     2041 cgctaccgat gttcgggtcg tgcctgcggc cggctggagc cggtcggtga cgttcgaacg
     2101 gaccgggctg ccgtttcgtc ctcccagccc caacctgcgt gacctcgagg cgctgttcca
     2161 ttatccgggt gtgtgcctct tcgaaggcac ggcgctctcg gtgggtcgcg gctcggatgc
     2221 tccgttccac cagatcgggg ccccctggct ggatccggtg gccgtcctgg cgcgggtcca
     2281 tgagcaaccg ccgccgggcg tacggttgga gccggtgact tttactccgg tgcaccccgg
     2341 cgacgggaaa tacgccgaca ccgccctggt cgggatccgg tgggtcatga ccgatcaggc
     2401 ccgctacgac ccggtccgga ccgcggtggt gctcctcaag gccattcgcg acgtccatcc
     2461 ggatcagatt cgcatcaacc cccgcagctt tgaccggctg gctggaggcc ccgggttgcg
     2521 ggaggccctc gaggccggtc tctccaccga tcggattgtc gccggttgga aggtccctac
     2581 cgcacggttc cgggagcggg ccaaaccggt gctgcggtac ccgaccaaat aaggcccatt
     2641 tcgccccagg gcggattgct agagagccct cgggcgggta tttttcaagg ctcttaactc
     2701 attggcatag ctgacattcc accgccccga ccgggcaggg gagatgggtt cttgcagctg
     2761 acggccgccg tccagcaggg ctacaaggcg accactcgac cgctcaccga ctggctgatt
     2821 cgcgcggggg tgacccccaa tgtcatcacc tcggtcgcgg ccctggtcgt catgctctcg
     2881 gcggtggcat tcgcgatcgg gtggatccgg accggtggcg ggctgctgct cctgagcggc
     2941 ctcctcgaca ccttggacgg cgacgtggcc cgagcggccg gcaagaccac tcgcttcggc
     3001 gccttttacg actcgacgct ggaccggctg ggcgatggcg tcagcttcat cggcatcgcg
     3061 accttcctgc tcaccacgcc ggggatacgc ttccccctgg tcggggctat cgtctgcatg
     3121 gtcgcggtgc tggtctcgct gctggtctcc tacgcccgag cccgggccga agggctgggg
     3181 ctcgactgca aagtcggcct ggttcagcgg gccgagcgga tcctgctgat cggcattcct
     3241 tcgctgttcg tcggagccgg tcccgatgga ctggtgttgc aggccatcgt ggggctgctg
     3301 gcgttgggct ccaccatcac cgtggtgcag cggtttctct atgtccggcg catcacggac
     3361 aacggcgcca attagcgccg ggcttcaccc tcgaaaggac cttgcgacgt gacccagaag
     3421 ttcactggcc ggatcgcgcc cgcctcgggc aagcttggga ttctgtgcgt ggggctcggt
     3481 gcggtgacca ccacgttcat ggcgggggtg gagaatgtcc ggcgcggccg ggccaggccg
     3541 ttcggctcgc tgacccagct cgcgaccatc cggctcggca aacgcaccga gggccgctcg
     3601 ccgctcgtcc gggaattcgt cccgctggcc gacctgtcca acctggtatt cggcgcctgg
     3661 gaccccattc ccgacagcgc ataccatgcg gccctcaagg ccggggtgct ggacaagcac
     3721 gaacacatcg agccgatcgc cgatttcctc aagggcatcg tacccctggc ggcggtcttc
     3781 gaccagcact atgtgaaacg gctgcagggc accaacgtca agccggggaa gaacaagcgg
     3841 gagctggccg aggcgctccg aaaggacatc cgggaattca aggcgaagca cggctgcgac
     3901 cggctggtgg tggtgtggtg cgcctccact gagattttca ttcagccggg cccgacccac
     3961 gagagcctca ctgccttcga gaaggccatg gacaccaacg atccgtccat cgcgccttcg
     4021 atgttgtacg cctgggccgc gctcatggaa gatgtgccct tcgccaacgg cgcccccaac
     4081 ctgagttgcg acgcgccggc gctggagcaa ctggcccggc agcgccgggt ggccatcggc
     4141 gggaaggact tcaagaccgg gcagaccatg gtcaagaccg tcctgtcgcc catgttcaag
     4201 gcccgcatgc tgggcgtgag cggctggtat tccaccaaca tcctgggcaa ccgcgacggc
     4261 gaggtcctgg acgatccgga gagcttcaag accaaggagg agtcgaagct gggcgtgctg
     4321 gagtacatcc tgcagccgca gctctacccc gagctctacg gccagctcta ccacaaggtc
     4381 cggatcaact actacccgcc ccggggagac aacaaggagg ggtgggacaa catcgacatc
     4441 ttcgggtggc tgggataccc gatgcagatc aaggtcgact tcctgtgccg cgactcgatc
     4501 ctggcggcgc cgctggtgct ggatctggcg ctgttcttcg acctggcgca acgcgccggt
     4561 ctccacggca tccaggaatg gctctcgttc tacttcaaga gcccccagac ggctccgggg
     4621 ctctatcccg agcacgacct gttcatccag cagaccaagc tcaagaacac gctgcgctgg
     4681 ctgatgggag aggagcagat cacccacctc gggaccgagt actacgaata cggcggtgaa
     4741 cagtgagcgg tgaacggtgt acagtgaacg gtgaacagtt catgctttgg cgtggcccgt
     4801 tcactgttcc cggttcactg ttgcccgttc accgttgacc attaaccggt aagcgaccct
     4861 gaagtactgt caccgtacgt ccgtctcacc cgacgccgtc atcggtcaga cggtggcgtt
     4921 cttcggcgcc cgcctgactc cgtcggaaga gctgccccgc cgccgccgct tttccggcat
     4981 gctgggtgag ctctcggtga cagtgcaggc cgagggcggg cattacaccc tggtaacggt
     5041 cgagaccaat cagccgggcg agagcgagct ggaccggctg gcgaaacagt tcctcggctc
     5101 ggtccatcgg atggccgagc cggaccacgt ccttcgggga gcctactgac cggtgcgact
     5161 tctgccgcgg gatcagaagt tctttgacct gtttactgcc tcggcgacgt tctcggtcca
     5221 ggcggcgggc tacctgatcg agctgctcca gcgggacgag gacgaccgct gggccgtggc
     5281 cgacaccatc aagcagctgg aacgccaggc ggacgaggtc acgcacgaag tggtgacccg
     5341 gctcgatcgc accttcatca ccccgctgga ccgggaggat atccatctgc tggcctcccg
     5401 gctcgacgac gtcacggaca gcatcgacgg gatcgcccgc cgcttccaga tcttcaaacc
     5461 gggaccgtcg cccgagggcg cggtcctcat ggcgggggtg gtccagcggg ccgcccaaca
     5521 gctgctcgat gcggtccgag tgctggggaa cgggcggccc cgcaccgtgc tcgccagctg
     5581 ccgggaggtc aagcggctgg aagaggaggg ggatggactc taccatgggt ggctggggcg
     5641 gctgttcgat gagaccaccg atccgatccg gctgatgaag tggaaggagc tgtacgacgc
     5701 cctggagcgc accctcgacg tggcggagga tgtgtccaat gtgctcgagt ccgtggccat
     5761 caagcacggc tgaccgtgga cgcgaccatc cccttggtgc tgtccatcat cggcgtggcg
     5821 ctggtcttcg acttcatcaa cggcttccac gacagcgcca acagcatcgc gacggtggtc
     5881 agcacccggg tcctgacgcc ggcggtggcc gtcctctggg ccgcgttctt caatttcatc
     5941 gccgccttta ccgtgggcac cgcggtggcc cggaccatca gcaccggcct ggtggtgccc
     6001 gaggcggtca atccgaccgt catcctggcc gcgctcctgg gcgcgatcac ctggaacctg
     6061 atcacctggt tcttcgggct ccccagttcg tcgtcccacg ccttgctggg cggttttgcc
     6121 ggagcggccg tgagccacta cggcatgtcg gccatcatcg ccagtggctg gatcaagcca
     6181 atcgcggcaa tcgcgctgtc gccgctgctg ggcatggggc tgggcctgac gctctacgtc
     6241 tccatcgcgt ggctgatgca ccgggccccg ccggcccggc tcgacaaagc cttccgccgc
     6301 atgcagctgg tgtccgcggc cctgtattcc ctgagccacg gcgccaatga tgcccagaag
     6361 accatgggga tcatcgtgag cctgctggtg gcctcccatt cgctctttgc gggggccacc
     6421 ggctggttgg gcctgttcga tgttcccaac ggggatcacg tgccgctgtg ggtggtgctg
     6481 gcggcccatg ccgccattgc cggcgggacg gccgcgggtg gctggcgcat cgtcaagacc
     6541 atgggaaccc ggatcaccaa actcaccccc ttcggcgggt tctgcgccga aaccgcggga
     6601 ggaacgacga tcatgctggc ctcggccctg ggagtgccgg tgagcaccac ccacaccatc
     6661 actggcgcca tcgtgggagt cggcaccagc cggcgtaccg gagcggtgcg gtggggggtc
     6721 gcgcgacaga tcgtgtgggc ctggatcctc accattccgg tcagcgcgct catcgcgggg
     6781 ctcgtcttcg cgctggtcgg ctaaatttct tccatggccg gtaccgtgcc tgccaccgcc
     6841 ccctcgattc ctgccggcct caaccgagac cagttgctgg agctttactt ctacatgcgg
     6901 ctcacccggt cgctggaaga gcggctggtc aatctctacc gccagaccaa agtcatcggc
     6961 ggtctgttcc ggtcgctggg ccaggaagcc gatgcggtcg gcagtgccta tgcgctggac
     7021 cggactcgag gcgacatcct ctcgccgctg atccgaaacc tgggctcgat gctggtgcag
     7081 ggggccacac cgctcgaggt gctgcgccag tacatggcca aggccgacgg ccccactacc
     7141 gggcgcgagc tcaatattca cttcaacgac ctggagcgtg g
//
LOCUS       DASWKS010000649         5423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_1474271, whole genome shotgun sequence.
ACCESSION   DASWKS010000649 DASWKS010000000
VERSION     DASWKS010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1474271"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1512)
                     /locus_tag="VGA78_18520"
     CDS             complement(64..1512)
                     /locus_tag="VGA78_18520"
                     /inference="COORDINATES: protein motif:HMM:NF015368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895933.1"
                     /translation="METLLLAGCLLWVVGVFVGQHRNRNFLIAYLLLAGITGTWHVGV
                     NQYRWQLVPAYLFLLGASLVAAIRLGGGPPRPGPRWRAFLARTLLILALLIVLALPLW
                     LFPEIRYERPTGPYGVGTRTEVWVDSSRAETFTPAPDDRRRLLVQIWYPADPVPGAAR
                     VRSHPSPRELARGLASAAPGIPSFLFSSLGRGLTWARAEVPVSGAQRTFPLLLFSHGF
                     GVSRTQYGFAMAELASHGYVVAGIEHSYAAIGTVFPDGEVANVRLEDAKLLQNDSSAN
                     AMAAVWAGDGRFVLERMFELVRRDPRQTLTGRIDTTRIGYFGHSFGGAAAANVMAADP
                     RVLAGVNLDGYLAGSAWVNGLDRPFLQVRSDSLDIEAMAEETLKQVGMTRQSLRELLE
                     EWNRRTVSVTRGGGHELHLKGSSHLNYSDLPLWSPVVSRVSHQAGTIDIRRAHRIVNE
                     IVAAWFDRHLKGNGPTLNELAGRYPEIEILSP"
     gene            complement(1546..2439)
                     /locus_tag="VGA78_18525"
     CDS             complement(1546..2439)
                     /locus_tag="VGA78_18525"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX9895934.1"
                     /translation="MRRPTSLALLWFAVTGSAAAQNFDTVTVRVVPISQGIAMLVGAG
                     GNLAVSWGKDATFVVDDQYAPLTEKIRAAIATLTANPVRFVLNTHYHGDHTGGNENLG
                     KAGALIVAHDKVRVRMSSGQISRVFNRSVPASPTGALPVVTFTETVTFHLNGDEIQAF
                     HVPPGHTDGDAVVWFKRSNVMHMGDLYFKDRYPFIDVDSGGDVEGVIGAAGRVLGMID
                     DNTKVIPGHGALSNKAELTRYRDMLVVARDRVKKLIAEGKTLDQITAAKPLADYDTTW
                     GTGFINPQIFLRLLYVSLGGK"
     gene            complement(2439..2777)
                     /locus_tag="VGA78_18530"
     CDS             complement(2439..2777)
                     /locus_tag="VGA78_18530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895935.1"
                     /translation="MTQRSRRTLWLGLSAVAMAAGTFWIGWWSVPVLALFMGLRCRSG
                     DAAIAALLAWTGLLVWNATTGPILPYADRLGGIFGLPGWGMLLATPLFAALLGWSAAT
                     LPHSLRHGGT"
     gene            complement(2774..5269)
                     /locus_tag="VGA78_18535"
     CDS             complement(2774..5269)
                     /locus_tag="VGA78_18535"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX9895936.1"
                     /translation="MRRFRLVIALVLLLALGFVGARPLGPLPALGDFLDPANGAWALL
                     RASRLPSSVSGLPGLSAPVELLLDDRGVPHIFASTEVDAYRALGWIVARDRLFQLELT
                     SRATAGTLAELLGARLLEADRATRALGLAHAADRKFARLDSTSPGRRAIMAYADGVNA
                     WIEGMGPADLPVEYRLLGKRPRRWRPEYTMYLFANMGLTLAGEDPAQPRLAVQSLVGQ
                     AAAEALVPLNSPVQEPIQPNGGAAPRFALAPLPPPGAPDSEATLALSLRRDLARGSSA
                     ERDEDGAGVLGSNNWAVAPSRTRDGQALLAGDPHLRLTLPSIWYEAHLVVPGRLDVAG
                     VTLPGSPGVTIGFNREVAWTFTNTGSDVLDLYRETVDHPTSPTRYRLDGAWRPLGLSV
                     ETYHDPAGRVLAVDTIRFTHRGPMRQAQGHWLSMRWTVLEVSREIDVFGRAVAASSAE
                     DWLDAMREYLVPTQNGLVADRRGTIAVRSSGWYPLRPGGRGDLIFDGSTSASDWTGRL
                     PVEQYPFSIRPTQGFLASANQQPVDPQDNPAYLGADWPSPWRAIRINTLLRGEPRMTP
                     DGMRRMHTDPESARAQAFLPFFQSAGGIPQAAGQSDPKLDRALSLLAQWDGSYRPDNE
                     RAILFELAMRELPTRLWDELIPPDSSEPSGRPVYSTSQSLYLALADPGSVWWDDRRTA
                     DTLETRHDILAQSLKAAFDTALARYGEPDGGGWAWAKVWPTNIWHLLRLPSLSATGLA
                     VQGGPETIAPAGRNGEHGASWRMVVELGTPVRAWGTYPGGQSGNPASLLYTNRIQQWV
                     RGELDSLLFPRSAAELPDRRVRSRVRLMPAGGK"
BASE COUNT          970 a         1831 c         1819 g          803 t
ORIGIN      
        1 acgacaggac gacgataact accagtactg ggtactgagt actgagtacc gagtattgag
       61 tatctaagga ctcaggattt cgatctccgg gtaccgtccg gcaagctcat tcaaggtcgg
      121 tccattccct ttgagatggc ggtcgaacca ggccgccaca atctcgttca cgatccggtg
      181 tgcgcgacgg atatcgatcg tccctgcctg gtgactgacc cggctcacga ccggggacca
      241 gagcggcagg tcgctgtagt tcaggtggct ggaccccttc aggtgcagct cgtgaccgcc
      301 gccccgggtt accgaaacag tccgccgatt ccactcctcg agcaactccc gcaggctctg
      361 gcgcgtcatc ccgacctgct tgagcgtctc ctcggccatc gcctcgatgt cgagtgaatc
      421 gctgcgaacc tggagaaacg gacgatcgag accgttcacc caggccgaac cggccagata
      481 cccatccaga ttgactcccg cgagcaccct ggggtcggcc gccatgacat tagcggcggc
      541 ggctccgcca aacgaatgtc cgaagtagcc gatacgggtg gtatcgatcc ggccggtcaa
      601 ggtctgtctg gggtcgcgcc gaaccagctc gaacatccgc tccagcacaa agcggccatc
      661 cccggcccag accgccgcca tcgcgttggc ggaggagtcg ttctgcagga gcttggcgtc
      721 ctccaacctg acgttcgcca cctccccgtc ggggaagacc gtgccgatgg cggcatagct
      781 gtgttcgatg ccggcgacca catacccgtg actggccagc tcggccatgg cgaatccgta
      841 ctgggtccgg gacacgccga agccgtggga aaagagcagc agcgggaagg tccgctgggc
      901 gccgctgacc gggacctcgg cccgggccca ggtgagtccc cgccccagac tggagaacag
      961 aaagcttgga ataccggggg cagccgaggc gagcccccgg gccagctctc ggggggaagg
     1021 atgcgatcgg actcgggccg caccaggaac tggatccgcc ggataccaga tctgcaccaa
     1081 cagccgccgg cggtcgtcgg gagccggtgt gaaagtctcg gcgcggctgg agtccaccca
     1141 gacctcggtc cgagtgccga cgccgtaggg gccggtaggg cgctcgtagc ggatctcggg
     1201 gaacagccag agcggcaggg ccagcacaat cagcagcgcg aggatcagca gcgtcctcgc
     1261 caggaaagcc cgccaccggg gtccgggccg agggggaccg ccgcccaacc gaatggcggc
     1321 gaccagtgac gcgcccagca gaaacaggta ggccggaacc agttgccacc ggtactggtt
     1381 caccccgacg tgccaggtcc cggtgatccc cgccagcagc aggtaagcga tcaggaagtt
     1441 gcgattccgg tgctggccca caaaaacacc gacaacccag agcaggcacc cggctagaag
     1501 gagtgtctcc acgtccgctc agtcctcagt cctcagcact cagtctcact tacctcccaa
     1561 ggagacatac agcagtcgca gaaagatctg gggattgatg aagcccgtgc cccaggtggt
     1621 gtcgtagtcg gccagcggct tggcggcggt gatctggtcc agggtcttcc cttccgcgat
     1681 gagcttcttc acccggtcgc gtgccaccac cagcatgtcc cggtagcggg tgagctccgc
     1741 cttgttggac agggcgccgt ggccgggaat caccttggtg ttgtcgtcga tcatgccgag
     1801 aacccggccg gccgctccga tcacgccttc aacgtcgcca ccgctgtcca cgtcgatgaa
     1861 gggatagcgg tctttgaagt agagatctcc catatgcatc acgttcgacc gcttgaacca
     1921 gactacggcg tcgccatcgg tgtgaccggg gggcacatgg aaggcctgga tctcgtcccc
     1981 gttcaggtga aaggtcactg tctcggtgaa cgtcaccacc ggcagcgctc ccgtggggga
     2041 cgccggtacc gaacgattga agacccggct gatctgcccg ctgctcatcc ggacccgcac
     2101 cttgtcgtgg gccacgatga gggcgcccgc cttccccagg ttctcattcc ccccggtatg
     2161 atcgccgtgg tagtgggtgt tcaggacgaa tcgcaccggg ttggcggtga gcgtcgcgat
     2221 cgccgcccgg atcttctccg tcaggggcgc gtactgatcg tccaccacga acgtggcatc
     2281 cttgccccag gagaccgcga ggttcccacc cgcacccacc agcatggcga tgccttgact
     2341 gatgggaact acccgcacgg tgaccgtatc gaagttttgc gccgcggccg atccagtcac
     2401 ggcgaaccag agcagagcca ggctggtggg ccggcgcatc aggtacctcc atgtctcaga
     2461 gaatggggga gagtcgccgc gctccagccc agcagcgccg cgaacaatgg tgtcgcaagc
     2521 agcatacccc accccggcag accgaaaatg cctcccaacc gatcggcata gggcaggatc
     2581 ggacccgtgg tggcgttcca gaccagcaga ccggtccagg cgagcagcgc ggcgatggcg
     2641 gcatcgccgc tccggcagcg aaggcccatg aacagcgcca ggaccggcac gctccaccaa
     2701 ccgatccaga aggtaccggc ggccatcgcc accgcactca gcccgagcca caaggtccgg
     2761 cgggagcgct gggtcacttc ccgcccgccg gcatcaaccg cacccgggaa cggacccgac
     2821 ggtcgggaag ctccgccgca ctgcggggga acagcagcga gtcgagctca ccgcggaccc
     2881 attgttgaat gcgattggta tagagcaggc tcgcggggtt gccggactgg ccgccgggat
     2941 aggtgcccca ggcccgcact ggggtaccca gctccaccac catgcgccag ctcgcaccat
     3001 gctcgccgtt gcggccggcg ggcgcgatgg tctccgggcc gccctgcacc gccagaccgg
     3061 tggccgacag cgagggcagt cggagcagat gccagatgtt ggtgggccac accttggccc
     3121 aggcccatcc tcccccatcg ggctcgccgt agcgtgccag ggcggtgtcg aacgctgcct
     3181 tcagactctg ggccaggatg tcgtgacggg tctccagcgt gtcggcggtc cgacggtcgt
     3241 cccaccatac gctccccgga tcggccaggg ccaggtacaa gctctgtgag gtggaataga
     3301 ccggacggcc ggacggctcg gagctatccg gcgggatcaa ctcatcccag agtcgggtgg
     3361 gcagctcccg catggccagc tcgaacagga tggcccgctc gttgtcaggg cggtagctgc
     3421 cgtcccactg cgccagaagc gagagggccc ggtcgagttt cgggtcggac tgaccggcgg
     3481 cttgcggtat gccacctgcg ctctggaaga acggcaggaa cgcctgagcc cgcgcactct
     3541 ccggatcggt gtgcatccgg cgcatgccat ccggagtcat gcgcggttcg ccccgcagca
     3601 gtgtgttgat gcgaatggcc cgccagggtg agggccagtc ggcccccagg tacgcgggat
     3661 tgtcctgggg atccaccggc tgctgattgg cggacgcgag gaagccctgg gtgggccgga
     3721 tcgagaacgg atactgttcc accggcagtc ttccggtcca gtcactggcc gaggtgctgc
     3781 cgtcgaagat cagatcgccg cgcccgccgg gccggagggg gtaccagccc gacgaacgga
     3841 cggcgatggt gccccgccgg tctgccacca gaccattctg ggtgggcacc agatactccc
     3901 gcatggcatc gagccaatcc tcggcgctgc tcgccgccac cgcccgaccg aagacgtcga
     3961 tctcgcgcga tacttccaac acggtccagc gcatggagag ccaatggccc tgcgcctgcc
     4021 gcatcggccc gcggtgggtg aagcgaatcg tgtccaccgc cagaacccgg ccggccgggt
     4081 catggtaggt ctccaccgac agccccaggg ggcgccaggc gccatcgagc cggtaccggg
     4141 tgggactggt ggggtggtcg accgtctcac gatacagatc gagaacgtca ctgccggtat
     4201 tggtgaacgt ccaggcgacc tcgcgattga agccgatggt gacgccggga ctgccgggca
     4261 gggtcactcc cgccacatcg agacggccgg gaacgaccag gtgggcctca taccagatgg
     4321 agggcagcgt caggcggaga tggggatcgc ccgccagcag cgcctgacca tcgcgagtgc
     4381 gcgacggcgc caccgcccag ttgttgctcc ccagcacccc cgcgccgtcc tcatcccgct
     4441 ctgccgaaga cccgcgcgcc aggtcccgcc gcagcgacaa ggccagggtg gcttccgagt
     4501 cgggagcacc gggcggcggg agtggcgcca gggcaaagcg cggcgcggct ccgccgttag
     4561 gctggatcgg ctcctgcacc gggctgttca acggcaccaa cgcctcggct gccgcctgcc
     4621 ccaccagcga ttgcaccgcg agccggggct gggccgggtc ctcgcccgcc agcgtgagtc
     4681 ccatgttggc gaagagatac atcgtgtact ccggcctcca tcgccgggga cgtttcccca
     4741 gcagtcggta ctccaccggc agatcggccg gacccatccc ttcgatccat gcattcacgc
     4801 cgtcggcgta ggccatgatg gcccgccggc cgggagaggt tgaatcgagc cgggcgaact
     4861 tccggtcggc cgcgtgggcc aatcccagcg cccgggtggc gcggtccgcc tcgagcagac
     4921 gcgcgcccag cagctcggcc agggttccgg cggtggcccg actggtgagc tcgagctgga
     4981 agagccgatc gcgggcgacg atccatccca gcgcccgata ggcgtcgacc tcggtggagg
     5041 caaagatgtg ggggactccg cgatcgtcca gcagcagctc gacgggagcg gagaggcccg
     5101 ggagaccgga gacggaagac gggagccggg aggcgcgcag cagggcccag gcgccattgg
     5161 ccgggtcgag gaaatcgccc agggcgggca gcgggccgag cggccgggcg cccacgaacc
     5221 cgagggccag cagcaggacc agcgcgataa cgaggcgaaa ccgtctcatg gaagcggggt
     5281 gaagcatggg ctcggctggt ggggtgtcaa ggccggtgat attgtatcca atatcgcatt
     5341 cctaaatccg gggaccagcc atgcgaccga tcaccgccgt tctgctcgtt gccaccgcgt
     5401 gcggtggggc aaccgccacc gtc
//
LOCUS       DASWKS010000650         1571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_727159, whole genome shotgun sequence.
ACCESSION   DASWKS010000650 DASWKS010000000
VERSION     DASWKS010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_727159"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="VGA78_18540"
     CDS             complement(<1..309)
                     /locus_tag="VGA78_18540"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX9895937.1"
                     /translation="MATSVNLAGQTQVKSEPNVIPMIDVMLVLLIIFMIVTPLIASGF
                     KATMPQGKNLTPDGEDDGEVVLGVDESGRYFLNGAPIPTETLEDQLKSIYAARPENKV
                     L"
     gene            complement(293..1039)
                     /locus_tag="VGA78_18545"
     CDS             complement(293..1039)
                     /locus_tag="VGA78_18545"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX9895938.1"
                     /translation="MGVDIMALWGHAGPFARGVVFVMLFMSLMSFTVAIKKLVYFYKS
                     TSATRKFAPQFSRAIQEEQLDQAISLAEKNKSSHVARVLGGALGEVKPLLRDRATITA
                     ADINSAERAIERQMLLELTDFKRGLGIMATVGSTAPFVGLLGTCMGIVASFEAMSSQG
                     ASGGLAGIAGGIAEALITTALGLLVAIPAVWFYNYFTTKIEYLTAEMTHSSKELIDYL
                     IKSVGSEFGRSIFTKEFQAQKAVSGSGHIS"
     gene            complement(1094..>1571)
                     /locus_tag="VGA78_18550"
     CDS             complement(1094..>1571)
                     /locus_tag="VGA78_18550"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX9895939.1"
                     /translation="ANPPPQGFQTVIPPTDIPKEIPPVNLNEKFNAADFSGKGVEGGV
                     AAGIVGGTGPVDTQAETYLEAEVDDPVQQINIPRPRYPPVMQQAGITGSVDVQYVVDT
                     TGHAESGSWKVLKSTNKAFEEPAREAIMKGVFKPARIRGKAVRQLVQQKISFNISQ"
BASE COUNT          263 a          510 c          485 g          313 t
ORIGIN      
        1 cagaactttg ttctcggggc gggcggcgta gatgctcttg agctggtcct cgagcgtctc
       61 ggtcggaatc ggcgctccgt tgaggaagta ccgccccgac tcgtccacac ccagcaccac
      121 ctcgccatcg tcctccccgt cgggagtcaa gttcttgccc tggggcatgg tggccttgaa
      181 tcccgaggcg atcagcggtg tcacgatcat gaaaatgatc agcaacacca gcatgacgtc
      241 gatcatcggg atgacgttcg gctcggactt aacctgcgtc tgccccgcga ggttaactga
      301 tgtggccact gccgctcacc gccttctggg cctggaactc cttggtgaag atcgaccggc
      361 cgaactcgga gccgacgctc ttgatcaggt agtcgatcag ctctttggag ctgtgggtca
      421 tctcggccgt caggtattcg atcttggtgg tgaagtagtt gtagaaccac accgccggga
      481 tggctaccag cagaccgagc gccgtggtga tcagcgcctc ggcgataccg cccgcgatgc
      541 cggccaggcc gcccgacgcg ccctgggacg acatggcctc gaacgacgcc acgataccca
      601 tgcaggtgcc cagcagaccc acgaagggcg cggtggaacc caccgtcgcc atgatgccca
      661 gaccgcgttt gaagtcggtc aactcgagca gcatctggcg ctcgatggcc cgctcggccg
      721 agttgatgtc cgccgcggta atggtggccc ggtcccgcag cagcggcttc acctcaccca
      781 gcgcaccacc caggacccgg gcgacgtgag acgacttgtt cttctcggcc agcgaaatgg
      841 cctggtcgag ctgctcttcc tggatggccc ggctgaactg cggcgcgaac ttccgggtgg
      901 cgctggtgct cttgtagaag tagaccagct tcttgatggc caccgtaaag ctcatgagcg
      961 acatgaagag catgacgaac acgacgcccc gcgcaaacgg tccggcgtgg ccccacaagg
     1021 ccatgatgtc aacacccatt tggttacctc tctcctatgt tccgggttcc gggactcttg
     1081 gctcgaccct ggttcactgc gagatgttga acgaaatctt ctgctgcacc agctgccgga
     1141 ccgctttccc gcggatccgg gccggcttga acacaccctt catgatggcc tcgcgggccg
     1201 gctcttcaaa cgccttgttg gtgctcttga gcactttcca ggagcccgac tcggcgtgtc
     1261 cggtcgtgtc gacgacgtat tgcacatcga cgctaccggt gataccggcc tgctgcatca
     1321 cgggcgggta tcggggccgc ggaatgttga tctgctgcac cggatcgtcg acctcggcct
     1381 cgaggtaggt ctccgcctgg gtgtcgaccg ggccggtgcc gcccacgata cccgcggcga
     1441 ctccgccctc gacgcctttc ccgctgaagt cggccgcgtt gaacttctcg ttcaggttga
     1501 ccggcgggat ttccttgggg atgtcagtcg gcggaatcac cgtctggaat ccctgggggg
     1561 gcgggttggc c
//
LOCUS       DASWKS010000651         4811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3656055, whole genome shotgun sequence.
ACCESSION   DASWKS010000651 DASWKS010000000
VERSION     DASWKS010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4811
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3656055"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1717)
                     /locus_tag="VGA78_18555"
     CDS             complement(<1..1717)
                     /locus_tag="VGA78_18555"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEX9895940.1"
                     /translation="MLLPLALLAVLVALPLEAQARFDWYSRGPYRPAVPRPDSLLGHE
                     PGARHTMYHEQQGVFDRLLATGAERVRSEVIGRTAEGKAMRILIISAPENLARLDQIR
                     TDLAALADPRRTSPAQAAQIAQRSPAVAVLSHSIHGNEPAGFEASMQTAYQLLASDEP
                     ATLEILRNVVTIINPSQNPDGHERFAAWNNSVTVPSDEPGALEQQEPWSVQGRFNHYR
                     FDMNRDFLAQSQLETRALLGVMLKYRPQLVVDLHSTTSQFFFPPTAQPMNLNLGPWQS
                     KWEERFGRGNGAAFDRYGWQYYVRDIFDYFYPGYVDMWPSLSGATGMTFETDGGPELR
                     LRKEDGSVTSFADGIAHHYVASLATLGVLAAGREERLKDYYDFHATGMAEARARPFKR
                     VVISPDNDPARVHRLVDILTRSGIEVQRSAAPYAAPMAHEYQGGPAGRKSFPAGSYLI
                     DLAQPEARLATVLLEPRAIVDSGFVRKQLDRFERNRRRGEASTREFYEFYDVTAWSLP
                     LTLGLDAAWTEDLTAVAGELVAAGSPMAPGRVTGRAQSAYAFPAGREASTRLALHLLR
                     EGFRVG"
     gene            complement(1975..2907)
                     /locus_tag="VGA78_18560"
     CDS             complement(1975..2907)
                     /locus_tag="VGA78_18560"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX9895941.1"
                     /translation="MSSDRTHGWHRTLWGFVRRTLEAADENHVPFLASAITFDTLLAA
                     IPFILLLLAGLGWLAQLTANGASPDPTRLFEQFLPPHQRGPGDPFAAGEQLLGRIAEF
                     GQRVTLVAVPAFLWFATRTFASIRTALNDIYDVSLRPAPRRHFLLGFLYGKLRDLSMV
                     VMTLLLFLTSTAISTGLALAQAWGEGRLPSFSFWLGNVGNILGQAVAFGFIVLLFFGL
                     YRFASPRKIRWSAALLASVFAAVAFEAARRIFAFYVLNVVTSTRTSNDAQLGAIILCV
                     IWVYYSALVFLLGGVVAETWEMRRLLRRHRVALN"
     gene            complement(2904..3329)
                     /locus_tag="VGA78_18565"
     CDS             complement(2904..3329)
                     /locus_tag="VGA78_18565"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEX9895942.1"
                     /translation="MRRQDGRDVIVLEDEGSSSIGWFILGAAVGAGVALLLAPASGED
                     TRRRISRGARRIKDTAVDALEELRDDWDDIKDRASETVDQVKATARGVAEDVEEGAKA
                     VAASAARPRGTTAAREELERRLADARARRRQPEDQEPVA"
     gene            complement(3337..4746)
                     /locus_tag="VGA78_18570"
     CDS             complement(3337..4746)
                     /locus_tag="VGA78_18570"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEX9895943.1"
                     /translation="MEPSSKDVIELYGGAVRTSGTGVEILDPGALRSPATDRLVGVAV
                     FGQPAEMEAARWLLWELGQATGARPASIHELYLARGRGECAGFTVPAINVRMLAYDTA
                     RAVFRAARARQAGAILLEIARSEIAYTDQRPSEYVAVMLAAALREGWELPVFIQGDHC
                     QVNVKKYQTNPEEEVGEVKKLIAEEVAAGFYNIDVDSSTLVDLSQPTLDAQQRINYQR
                     AAEITAFIRELEPPEVTVSVGAEIGEVGHKNSTVEELHAFMQGYNRTLASLGNYAGIS
                     KISVQTGTSHGGVVRPDGTIADVKLDINALEALSQAAREYGLGGAVQHGASTLPADAF
                     GNFTRVEAVEIHLATNFQNLVYDHPRLPGDLRARIYAWLDANAQSEKKPDDTPEQFYY
                     KARKRAIGPFKRELWELPEDVRAAISADLEQTFGFLFDQLGVRGTAALVREHVTAPVQ
                     HHIMLAKVGAAADDPDAGE"
BASE COUNT          798 a         1629 c         1605 g          779 t
ORIGIN      
        1 cgccgacccg aaaaccttcc cgaagcaggt gcagcgccag ccgggtactg gcttcgcgcc
       61 cagcgggaaa ggcatacgcg ctctgggccc gccccgtgac ccggcccggg gccatcgggc
      121 tgccggccgc gaccagctca ccggccacgg cggtcaggtc ctcggtccag gcggcatcca
      181 ggcccaaagt gagcggcaag gaccacgcgg tcacgtcgta gaattcgtag aactcgcggg
      241 tggatgcctc cccccggcgg cggttgcgct cgaaccggtc gagctgcttg cgcacgaaac
      301 cggaatcgac gatcgcgcgc ggctcgagca gcacggtggc gagccgagcc tccggctgcg
      361 ccagatcgat caggtagctg cccgccggaa agctcttgcg gccggccgga ccgccctggt
      421 attcgtgggc catcggggcg gcatacgggg ccgcgctgcg ctgcacctcg atcccggatc
      481 gggtcaggat atcgaccagg cggtggaccc gggccggatc gttgtcgggt gagatcacca
      541 cccgcttgaa ggggcgggcg cgcgcctccg ccatgccggt ggcgtggaag tcgtagtagt
      601 ccttgagccg ctcttcccgc cccgcggcca gcacgcctaa cgtcgccagc gatgccacgt
      661 agtggtgcgc gatgccgtcg gcgaagctgg tgaccgaccc gtcttccttg cggagtctga
      721 gctccggacc gccgtcggtc tcgaacgtca tcccggtggc gccgctcagc gagggccaca
      781 tatcgacgta gccggggtag aagtagtcga agatgtcgcg cacgtagtac tgccatccat
      841 aacggtcgaa ggccgcgccg ttgccgcgtc cgaatcgctc ttcccatttg gactgccagg
      901 ggcccaggtt gaggttcatg ggttgggccg tgggcggaaa aaagaactgg ctggtagtgc
      961 tgtgcaggtc caccaccagc tggggacggt acttcagcat cacccccagc agcgcccggg
     1021 tctccagctg cgactgggcc aggaagtcgc gattcatgtc gaagcggtag tgattgaatc
     1081 gcccctgcac actccacggc tcctgctgtt ccaacgcgcc cggttcatcg ctcggcacgg
     1141 tgaccgagtt gttccaggcc gcgaagcgct cgtggccgtc gggattctgg gagggattga
     1201 tgatggtgac gacgttccgc aggatctcaa gcgtggcggg ctcatccgag gccagcagct
     1261 gatacgcggt ctgcatcgag gcctcgaaac cggccggctc gttgccgtga atcgagtggg
     1321 agaggaccgc caccgcgggc gagcgttgcg cgatctgagc ggcctgagcc ggcgaggtgc
     1381 ggcgaggatc ggccagcgcc gccagatcgg tccggatctg atccagccgg gccaggttct
     1441 ccggcgccga gatgatcaga atccgcatcg cctttccctc agcggtcctc ccgatgactt
     1501 ccgaccggac ccgctccgcc ccggtcgcca acagccggtc aaagaccccc tgctgttcgt
     1561 ggtacatggt gtggcgggca cccggctcgt ggcccagcag ggagtcgggc cgcggaacag
     1621 cgggtcgata gggaccgcgg ctgtaccagt cgaaacgggc ttgggcctct agcgggagag
     1681 cgacgagaac ggccaggagg gcgagaggga ggagcattcg ggttccgggt tccgggttcc
     1741 aggtgcctgg tgctgtgctg ggtgcggtgc tatgtgccgg gtgccaggtg tggtgcaaag
     1801 tgctgtgcca ggtgccgtgc cccgtgcggt gccgtcctgg ccggaggcgg cggcaggata
     1861 atacccgggc ctcgttccgt gccaagagcc ggactctgtt tcccacctgg caccaggcac
     1921 cgagcaccgc acccagcacc gcacccggaa cccggaaccc ggcacctgga accgtcagtt
     1981 tagagccacc ctatgccttc gcagcagccg cctcatttcc caggtctccg ccaccactcc
     2041 acccagcaga aataccaggg ccgagtagta gacccagatg acgcagagaa tgatcgcgcc
     2101 cagctgggca tcgttcgagg tgcgggtcga ggtgaccacg ttcagcacat agaacgcgaa
     2161 gatccggcgg gcggcttcga aggcgaccgc ggcaaagacc gaggccagca aagcggcact
     2221 ccagcggatc ttgcgggggg aggcgaaccg gtagagcccg aagaacagca gcacgatgaa
     2281 gccgaacgcc accgcctggc ccaggatgtt cccaacgttc cccagccaga acgagaacga
     2341 gggcagccgc ccctcacccc acgcctgggc cagggccaga ccggtggaga tggcggtact
     2401 ggtcagaaac agcagcaggg tcatgaccac catcgacagg tcgcgcaatt tgccgtagag
     2461 aaaccccagc agaaagtgcc gtctgggcgc gggccgcagc gagacgtcgt agatgtcgtt
     2521 gagggcggtc cggatgctgg cgaaggtgcg ggtggcaaac cagaggaagg cggggaccgc
     2581 caccagggtc acccgctggc cgaactcggc aatccgcccc agcagctgct cgcccgctgc
     2641 aaaagggtcc cccggacccc tctggtgcgg gggaagaaac tgctcgaaca aacgggtcgg
     2701 gtcgggcgat gccccgttgg cggtcagctg cgccagccag ccgaggccgg ccagcagcag
     2761 cagaatgaac gggatggcgg ccagcagcgt gtcgaaggtg atcgcgctgg ccaggaaagg
     2821 aacatgattc tcgtccgccg cctccagggt ccgtcgaacg aagccccaca gcgtccgatg
     2881 ccagccgtgg gtgcggtccg aactcaggcg accggctcct gatcctccgg ctgacgccgt
     2941 cgggcccggg cgtcagccag gcgccgctcc agctcctccc gggcggccgt ggtgcccctc
     3001 ggccgcgcgg ccgacgccgc gacggccttg gcgccctcct ccacatcctc ggccacgcca
     3061 cgggcggtcg ccttgacctg gtcgaccgtc tcggaggctc gatccttgat gtcgtcccag
     3121 tcgtcgcgca gttcttccag cgcgtcgacc gccgtgtcct tgattcgccg agcacctcgc
     3181 gagatgcgtc ggcgggtatc ctcgccgctg gccggggcca ggagcagggc cactcccgcg
     3241 ccgacggcgg cgcccagtat gaaccagccg atactggagg agccttcatc ctccagcacg
     3301 atcacgtcgc gtccgtcctg cctccgcatg gtcccctcac tctccggcgt ccggatcgtc
     3361 tgccgccgcg cccacctttg ccagcatgat gtggtgctgg accggtgcgg tcacatgctc
     3421 ccgcaccagc gccgcggtac cccgaacacc caactggtcg aacagaaagc cgaaagtctg
     3481 ttccagatcg gccgagatcg cggcccggac atcctccggc agctcccaca gctcccgctt
     3541 gaacggaccg atggcccgtt tccgtgcttt atagtaaaac tgttccggcg tgtcgtccgg
     3601 tttcttctcc gactgggcgt tggcgtccag ccaggcatag atccgggccc ggaggtcgcc
     3661 ggggagcctg gggtggtcgt aaaccaggtt ctggaagttg gtggccaggt gaatctctac
     3721 ggcctccacc cgggtgaaat tcccgaaggc atcggccggc agggtgctgg caccgtgctg
     3781 gaccgccccc ccaaggccgt actcccgggc ggcctgggac agcgcctcca gggcgttgat
     3841 gtccagcttg acgtcggcaa tggtcccgtc cggccgcacc acgccgccgt gggacgtgcc
     3901 cgtctggacc gagatcttgc tgattcccgc atagttgccc agtgaagcca gggtccggtt
     3961 gtagccctgc atgaaggcgt gcagctcctc cacggtgctg ttcttgtgac ccacctcgcc
     4021 gatctccgcc cccaccgaca ccgtcacctc gggaggctcc agctcccgga tgaaggcggt
     4081 gatttcagcg gcccgctggt agttgatccg ctgctgtgcg tccagagtcg gctgggacag
     4141 gtccaccagg gtcgagctgt cgacgtcgat gttgtagaag ccggccgcga cctcctcggc
     4201 gatcaacttc ttgacctccc cgacctcttc ttcggggttt gtttggtact tcttgacgtt
     4261 cacctggcaa tgatcaccct ggatgaagac cggaagctcc cacccctccc tgagcgccgc
     4321 ggccagcatg acggccacat attcggacgg ccgctggtcg gtgtaggcga tttcggaccg
     4381 ggcgatctcc agcaggatgg ctccggcctg ccgggccctg gcggcccgaa acactgccct
     4441 ggccgtgtcg taggccagca tcctgacgtt gatcgcggga acggtgaagc cggcacactc
     4501 gccccgcccc cgcgccaggt acagctcatg gatcgaggcg ggccgagctc cggtagcctg
     4561 gcctagttcc cacagcagcc agcgtgcggc ttccatttcc gctggctgac cgaaaaccgc
     4621 caccccgacc agccggtcgg tggctgggga tcgcagggcg cccgggtcga ggatctccac
     4681 tccagtcccg gaggttcgaa cggcgccgcc gtacagctcg attacgtcct tggatgatgg
     4741 ttccatggtg gtctcggtcg gtacagcgga aggagacgat ctacccccgt tggtggggcc
     4801 aatttaggcc c
//
LOCUS       DASWKS010000652         4412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3325633, whole genome shotgun sequence.
ACCESSION   DASWKS010000652 DASWKS010000000
VERSION     DASWKS010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4412
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3325633"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2743)
                     /locus_tag="VGA78_18575"
     CDS             complement(<1..2743)
                     /locus_tag="VGA78_18575"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9895944.1"
                     /translation="MITRLLVRSLSALLLAGLVFLLAKPVAGQTTTGTIRGYVTNAAG
                     NPLPGVEIVARNAETGVQRSTTSKADGGYLFPGLTPGVYDITARQIGRSPDVRRVQVQ
                     IGATLLADFRLEERAVQLAELEVVERVRPTVETRTSEVATNVTQQQINNLPSSDRNFL
                     DLAVLAPGAVILGNRINDTRKTVAFGAQGAEQINVFIDGASYKNDILKGGVAGQDASR
                     GNPFPRNAVREFRVITQNYKAEYQKASSGIITATTHSGSNEWEGHAFFSYIDKGLFAL
                     DSFQLADKAAPGSTFQEPDLSRYLAGFSIGGPITRDKLHFFASYEGNYQDRSSRVNIV
                     PPPGTPALDTVNFAQYNGAFESPFRQTLVFGKLSYAASNSSSLELSLNVREENDVRDF
                     GGNTAFQSATRFNNNVTTGLLKYNVFKSAWLNEASASYQRYHYNPVPNDPGTINRFFG
                     FGCCAQIGSNVSVQDFRQARLSLRDDLTYTGFEAAGSHVLKGGLYVDFSKYDIEKRNS
                     ENPRFVFEPWFNNFSIPEHVEFQSGDPLFKTNNTQIGAYIQDDWSPTPRLTLNLGIRW
                     DYESGMLNYDYVTPQAVVDSLTKYQDRLVGVPLDPDRYFTDGTDRSRFLGAFQPRLGF
                     SYQLDRNGRTTLFGGWGLFYDRTLFDQAIEEKFALQHPSFRIGFRPVGSTEAGRIDWD
                     PTYMQGTPEQVVSRLLSSATSGAPEVKLLPNDLRPPKSHQFSAGVRQLVGDFAVSAAY
                     TGVRSSNVFTFYWSDANFVCPDRSFGVAGCFVDNVIPGFSTILLADNAGKTWYDALQL
                     QIDRPLEYTGEIGWGFGLAYSFANRQTEGFNDDFSFPNPADYPKEERNDEEHRVVANF
                     ITDFPVLWGLQFSGLFTWGTGVQLNVGDRFGGTSNPLQVAAFDTPKFTNLDLRLRAPF
                     "
     gene            complement(2802..3830)
                     /locus_tag="VGA78_18580"
     CDS             complement(2802..3830)
                     /locus_tag="VGA78_18580"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX9895945.1"
                     /translation="MPAVPQVRVVTIKDVARSARVSVATVSRVFNSSNLVNGETLTRV
                     QDAARRMGYVPHVGARNLVTRRTHTIGVLLPDLYGEFFSEIIRGIDQTAHRRGYHLLV
                     SSAREAGEPFEAALSAMRGRVDGLILMSPYLDSETFRRTLTHGYPVVLLSCAPGVTSC
                     DSLSIANYEGARAITRHLAAQGHRRIAMILGAAGNYDAAERLRGYQAAVAEEALAGDA
                     ELLIPGDFSEASGHAAAERILSLAGRPTAVFAANDCMAIGALSRFREAGLRVPEDIAI
                     AGFDDIPMARYVHPALTSVSVDISVLGERATARLLDALHQPAPREPVHETLPTTLVVR
                     RSCGAQRT"
     gene            3967..>4412
                     /locus_tag="VGA78_18585"
     CDS             3967..>4412
                     /locus_tag="VGA78_18585"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX9895946.1"
                     /translation="MASAPPAAPPPKSAARFDRSIVEGPIPKAVWKLAWPTMLQNVIG
                     GLQGIIDHAMVGHFVGYTGNAGIGVAWQIFLVVMVFISSLFSGMGVLVARFAGAGDAG
                     KVNRTVYQSFLAAAFMCFGVLAPVGWVLAPSLLGVVNAAPEVQAEAL"
BASE COUNT          725 a         1403 c         1490 g          794 t
ORIGIN      
        1 ggaacggtgc ccgcagccgc agatccagat tggtgaactt gggcgtatcg aaggccgcca
       61 cctgcagcgg attgctggtt ccgccgaacc ggtcaccgac gttcagctgc acgccggtgc
      121 cccaggtgaa cagcccgctg aactggagtc cccacaggac cgggaaatcc gtgatgaagt
      181 tggccacgac ccggtgctcc tcgtcgttgc gctcttcctt ggggtagtcg gccgggttgg
      241 ggaaactgaa gtcatcgttg aagccttcgg tctggcggtt ggcgaacgaa taggccagtc
      301 cgaaccccca gccgatctcc ccggtgtact ctagcgggcg gtcgatctgc agctgcaggg
      361 cgtcatacca ggtcttgccc gcgttgtccg ccagcaggat ggtgctgaaa ccggggatga
      421 cattgtccac gaagcagccg gcgacgccga agctgcgatc ggggcagacg aaattggcat
      481 cggaccagta gaaggtgaac acgttgctgc tccgcacgcc ggtgtacgcg gccgagaccg
      541 cgaaatcacc caccagctga cgaacccccg cgctgaactg gtgggacttg ggcggccgca
      601 gatcgttcgg cagcaacttc acctcgggcg cgcccgaggt ggcgctcgac agcaggcggc
      661 tgaccacctg ctccggggtc ccctgcatgt aggtgggatc ccaatcgatc cgacccgcct
      721 cggtgctccc gacgggacgg aacccgatcc tgaagctggg atgctggagg gcgaactttt
      781 cctcgatcgc ctggtcgaac aaggtccggt cgtagaagag gccccacccg ccaaacagcg
      841 tggtccgacc gttccggtcc agctgatagg agaagcccag tcggggctgg aacgctccca
      901 agaagcggga ccggtcggtt ccgtccgtaa aatagcggtc gggatccagc gggaccccca
      961 ccagccggtc ctgatacttg gtgagcgagt cgaccacggc ctgcggcgtc acgtagtcgt
     1021 agttgagcat gccgctttcg tagtcccagc ggatacccag gttgagggtc agccgcgggg
     1081 tgggagacca gtcatcctgg atgtaggcgc cgatctgagt gttgttagtc ttgaacaagg
     1141 ggtcgcccga ctgaaactcc acgtgctccg gaatgctgaa gttgttgaac cacggctcga
     1201 acacgaaccg cgggttctcg ctgttccgtt tctcgatgtc gtacttcgaa aagtcgacgt
     1261 acagtccgcc tttcaacacg tgggatccgg cggcctcgaa cccggtgtag gtgaggtcgt
     1321 cccggagcga gagacgggcc tggcggaagt cctggaccga tacgttgctg ccgatctggg
     1381 cgcagcagcc gaacccgaaa aaccggttga tggtccccgg gtcgttcggc accgggttgt
     1441 agtggtaacg ctgataactg gcggaggcct cgttgagcca ggcactcttg aagacgttgt
     1501 acttgagcag gccggtggtg acgttgttgt tgaaccgggt ggcggactgg aacgcggtgt
     1561 tgccgccgaa gtcccggacg tcgttttcct cccggacgtt caggctcagc tccagcgacg
     1621 agctgttgct cgcggcatag ctcagtttgc cgaagaccag ggtctgccgg aagggagatt
     1681 cgaaggcgcc gttgtactgg gcgaagttca cggtatcgag cgccggcgtg ccgggcggcg
     1741 gaacgatatt gacccggctg ctgcggtcct ggtagttccc ctcgtacgag gcgaagaagt
     1801 ggagcttgtc ccgggtgatg ggcccgccga tgctgaagcc cgccaggtag cgtgacagat
     1861 ccggctcctg gaaggtcgag cccggggcgg ctttatcggc caactggaag ctatcgagcg
     1921 cgaagaggcc cttgtcgata taggagaaga aggcatgccc ttcccactca ttgctgcctg
     1981 agtgggttgt ggcggtaatg atcccactcg acgctttctg gtattccgcc ttgtagttct
     2041 gcgtgatcac gcggaactcc cgcaccgcat tgcgggggaa cggattgccg cggctggcgt
     2101 cctggccggc cacgccgccc ttgaggatgt cgttcttgta gctcgccccg tcgatgaaga
     2161 cgttgatctg ttccgcgccc tgggccccaa aggccaccgt ctttcgggtg tcgttgattc
     2221 ggttccccag gatcacggca cccggcgcca gcacggcgag gtccagaaag ttgcggtcgc
     2281 tgctggggag gttgttgatc tgctgctggg tgacgttggt ggcaacctcg gacgtccggg
     2341 tttcgacggt gggacgcacc cgctcgacaa cttcgagttc ggccagctga accgctcgct
     2401 cctccaggcg gaagtccgcc agcagggtgg caccgatctg cacctggacc cggcggacat
     2461 caggagaccg tccgatctgg cgggcggtga tgtcgtagac cccgggggtc agtcccggga
     2521 acaggtagcc cccgtcggct ttcgaggtcg tgctccgctg cacgccggtt tcggcgttgc
     2581 gggccacgat ctccacgccg ggcagcgggt tgccggccgc gttggtgaca tagccccgga
     2641 tggttccggt ggtcgtttga ccggccacgg gtttcgccag gagaaacacc agtcccgcca
     2701 gcagcagggc gctcaggctt cgaacgagga gtcgggtgat catacggctt ccctccgggt
     2761 gaggtacgtg gcggagcgcg ggatccggcc cgggaccgga gtcatgtgcg ctgcgctccg
     2821 cacgagcgac gcacgacgag tgtggtgggc aacgtttcat gaaccggctc gcgcggggcg
     2881 ggctggtgca gcgcgtccag caatcgtgcc gtcgcccgtt cgcccagcac actgatgtcg
     2941 acgctcaccg aggtgagcgc gggatggacg tatcgtgcca tggggatgtc gtcgaagccg
     3001 gcgatggcga tgtcttcggg cacccggagc ccggcttccc ggaacctgct cagcgccccg
     3061 atggccatgc agtcgttggc cgcgaacacc gcggtgggcc ggccggccag cgacaggatc
     3121 cgctccgccg ccgcatggcc cgaggcttcg ctgaaatcgc ccgggatcaa cagctcggcg
     3181 tcgcccgcca gggcctcctc cgccaccgcc gcctgataac cccgcagccg ctcggccgca
     3241 tcgtagttcc ccgccgcacc caggatcatc gcgatccggc gatgcccctg cgccgccagg
     3301 tgccgggtga tggctcgggc gccttcgtag ttcgcgatgg agaggctgtc gcagctggtc
     3361 acgccgggcg cacagctgag gaggaccacc gggtagccgt gggtcagggt ccggcggaag
     3421 gtctcgctgt cgagataagg cgacatcagg atcagcccgt ccacccggcc ccgcatggcg
     3481 ctcagcgcgg cctcgaacgg ctccccggcc tcgcgcgcgc tcgacaccag cagatggtac
     3541 cctcgccggt gcgcggtctg gtcgatgcct cggataattt cggaaaagaa ctcgccgtag
     3601 agatcgggca gcaggacccc gatggtatgg gtccgccgag tcaccaggtt ccgggccccg
     3661 acgtgcggca cgtaccccat gcgccgggcc gcgtcctgca cccgggtcag ggtctctcca
     3721 ttgaccagat tgctggagtt gaagacccgg gagaccgtgg ccacggagac ccgggccgac
     3781 cgggccacgt ccttgatcgt gactacgcgg acctgaggaa cggcgggcac cgtacctcca
     3841 atcagacgcg tgatttccag caaaaacggg gtcgccgtgg cagcggcggg cgtatgtaat
     3901 cgtttacact ctcgtaacag aagtgtcaag agcggccgcc cccgccaccc ccttatactc
     3961 ttgtccgtgg cttccgctcc ccccgctgcc cccccaccca aatccgcggc ccgcttcgat
     4021 cgatccatcg tcgaagggcc gattccgaaa gcggtctgga agctcgcctg gcccaccatg
     4081 ctgcagaacg tgatcggcgg actccagggc atcatcgatc acgccatggt gggtcatttt
     4141 gtcggctata ccggcaacgc gggcatcggc gtcgcctggc agatcttcct ggtggtgatg
     4201 gtcttcatca gctcgctctt cagcgggatg ggcgtcctgg tggcgcgctt cgcgggggcc
     4261 ggcgacgccg ggaaggtcaa ccgcaccgta taccagtcgt tcctggccgc cgccttcatg
     4321 tgcttcggcg tgctggcccc ggtcggctgg gtgctggcgc cttcgctcct cggtgtggtc
     4381 aacgccgcgc ccgaggtgca ggcggaggcg ct
//
LOCUS       DASWKS010000653        10188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3658823, whole genome shotgun sequence.
ACCESSION   DASWKS010000653 DASWKS010000000
VERSION     DASWKS010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3658823"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(308..775)
                     /locus_tag="VGA78_18590"
     CDS             complement(308..775)
                     /locus_tag="VGA78_18590"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX9895947.1"
                     /translation="MAAGRRSSATSWLDCSSAFAHLPVHSDSSDTRALGRELTDKFAE
                     GWTKARLDTLCSVFADDAVFIETPFSQPLQGLAAIRRWWADVPYHQSEINCSTGEIYS
                     AGPWFSTEFNVKFRRRRTGEWVEARGAIFCETAGGKITEMRMYWHRWSGGREV"
     gene            complement(699..1388)
                     /locus_tag="VGA78_18595"
     CDS             complement(699..1388)
                     /locus_tag="VGA78_18595"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HEX9895948.1"
                     /translation="MNAAAQQQPLTRSVEDYLKAIYHLSLDGQPASTSAIAQSLDLAP
                     PSVSGMIRRLSELGLLEHVPYRGVALTDEGRRAALRMVRRHRIIEAYLVALLGYTWDS
                     VHEEAERLEHAVSESLIERMAEALGNPQFDPHGDPIPDAQGHVEEPRYVPLSEVAEGE
                     TAEIHRVDTSHAERLRYLSDMGLTPGTAIRVMARQPFDGPLTIERGGRSQIIGHELAR
                     LLLCLRPSTRA"
     gene            complement(1392..2561)
                     /locus_tag="VGA78_18600"
     CDS             complement(1392..2561)
                     /locus_tag="VGA78_18600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895949.1"
                     /translation="MRAPLLAALVLVPALVHAQDTTLVQGSIYRRPFIAAIGRTAVGG
                     YLEANVAWSRTEGINEGPSFEVRRFNIFLFSSAGRRLRFTSELEFEHGTEEIALETAL
                     LDFMVTPSLVIRGGVLLPPIGAFNVNHDGPRYEFVDRPFVSTEIIPATLSEVGFGVHG
                     RLAPRGLSVSYDLYLTNGLGEGVILNPAGRTHLPSGKGESLFAEDENGSPAVSGRIGL
                     RSSRLGEIGLSHYRGVYNRWRVEGQRIDEPRWLSLTALDVETTVGPVTLRGETALAAL
                     DIAPELREVLADRQWGAYLDAVMPVIHPRIRGLESPVVLLGLRIERVDFNLGRFASTG
                     QPRRDDVAAATLGLSFRPVAGTVFRANYRLASSRDLLGNPAERTAAILFGLATYF"
     gene            complement(2558..2992)
                     /locus_tag="VGA78_18605"
     CDS             complement(2558..2992)
                     /locus_tag="VGA78_18605"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HEX9895950.1"
                     /translation="MNRRRFLGQLEAASAAAVAGSLGLQLTGCIPFPYVNATLIGNQL
                     AVRRDDFGSDRFVLVDTPAQPLPLYVYRHDDGSYTAVSTRCMHLGCQVEPVAGHLVCP
                     CHGSEYTNDGAILKGPTPLPLRRFSTRVDGERLLIELAPVEQ"
     gene            complement(2989..4275)
                     /locus_tag="VGA78_18610"
     CDS             complement(2989..4275)
                     /locus_tag="VGA78_18610"
                     /inference="COORDINATES: protein motif:HMM:NF018269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme oxidoredictase family protein"
                     /protein_id="HEX9895951.1"
                     /translation="MTSKPLVRTSRPFGRATRLTLLSCWLALGCDALLTNLPEDQNVL
                     AGPIDGLSGPQLTQHVRGDEEFGRTFAVGDGLGPIFIAAACERCHPGDGKGHPVFSLT
                     RFGRATALGFDPMRGMGGPQLQHRAIPRYTAEVVPGEATGVARLLAPAVTGLGYLEAV
                     SDQTLLDLEDPEDLDGDGVSGRVQLVDESDVVIEIDRLEAVLDGATSARQRIANQYVG
                     RFGRKAAAISLLHQTVTAYQQDMGLSTDILPFDPVNLQVGGFTGDDVPEPEVPSSTVQ
                     AVVFYLRTLRTPPRRGPEAADVVAGEGLFSSVGCAKCHLPTLRTGPSSLAALSNLEFH
                     PYTDLLLHDMGPELDDGYTEGRAFTSEWRTTPLWGLGLADRSQGGEAFYLHDGRARTL
                     RQAIELHGGEGAGSRTAFRALSPSQQEQLLAFLRSL"
     gene            complement(4371..6515)
                     /locus_tag="VGA78_18615"
     CDS             complement(4371..6515)
                     /locus_tag="VGA78_18615"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX9895952.1"
                     /translation="MSKSSFSGSGVVASSVAPVREFRVAGMDCASCAAAIERAVRPLP
                     GVRGVQVDVMGGTVRVGREAGYGNADLALAIRSAGYSVQEQTVDARGVDRGRLIAAGA
                     SGLLLLAGQVMGWTSVALSPIPVFLLSVVAGAWYVVPKGIRSARDVALDINVLVTIAA
                     AGAMVLGQWAEAAAVMFLFSVAELLESFAMSRARKAIQALVKLAPREAAVRRGGTVIT
                     VPVADVQIGEVVVVRPGERVALDGVVSAGVSAVDQSPITGESIPVDKEAGSEVFAGSI
                     NGYGALDITVTSHAEDTTLARILHAVEEAQASRAPTQSLVDRFARRYTPAVVGLAALI
                     AVVPPLVAAGEWGTWLYRALALLVIACPCALVISTPVTIVSGLTGAARAGVLIKGGSQ
                     LEAAGRVTTVAFDKTGTLTEGRPVVTDVLSVNGLGPREILRLAAAVEHHSEHPVARAI
                     AAEARAQGIQPPASNGFTALPGRGAWAEVEGRRLFVGNLRICAELGTCRQVVHDAVAD
                     LESHGKSAMLLTDASEPLGVLAIADRPRPGARESVAALRKTGVRRVLMLTGDNAAVAA
                     SVAHQIGLDADVRSGLLPADKHAAVAQLRQDGERVAVVGDGVNDAPALAAADLGVAMG
                     GAGTHVALETADVVLMGDDLSQVAETIRRSRRTVGIVRQNIAFALAIKAVFLVLAVLG
                     QATLWMAVAADMGASLAVITNGLRAMHLPKSL"
     gene            complement(6496..6876)
                     /locus_tag="VGA78_18620"
     CDS             complement(6496..6876)
                     /locus_tag="VGA78_18620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX9895953.1"
                     /translation="MTVIRPRLAGDDLCEVKVTDLEKVRRTRNEMKPAEAVLLLAETF
                     RALGDPNRLRLVHALSRAELCVCDLAAALGMSQSAVSHSLRVLRQLRLVRSRKDGKTI
                     YYRLDDDHIGRLLADGFEHVEEQL"
     gene            complement(7045..9300)
                     /gene="feoB"
                     /locus_tag="VGA78_18625"
     CDS             complement(7045..9300)
                     /gene="feoB"
                     /locus_tag="VGA78_18625"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEX9895954.1"
                     /translation="MTSALPVLPSGASTPGCRGCSANRTANLVQLGVSVGSWDYLVAL
                     AGNPNTGKSTVFNSLTGLRQHTGNWPGKTVSRAEGTFEHNQKKVKLVDLPGTYSLQAG
                     STDEEVARDFILFGEPDVTVVVVDATRLERNLNLVLQVLEFTDRVVVCLNLMDEARRH
                     GIAVDAKRLARELGVPVVAAAIRRKEGLPELLEAIERVATGAERTTPFRIRNHPPAIE
                     ATVAELVTDIEAAFPGLPNPRWVAFRLLNADERIEAAVRSGEIGVFLGDNQDQPWQPS
                     DQGAATLDAEAVLATARSLRWRLPSDFHDRLMESIYAAAQAIASRSELRGARRAKFDL
                     DRTLDRMLTSKWLGFPLMGLILAGVFWLTIAGANLPSAMLASVLIDQLHPLLRQFGAG
                     IGMPWWLSGFLFDGVYLATAWVVSVMLPPMAIFFPVFTLLEDFGYLPRVAFNLDRMFQ
                     RVGAHGKQALTMCMGFGCNAAGVVATRVIDSPRERLVAIITNNFSLCNGRWPTQILIA
                     TIFLGTLAPAHLASATAAGAVVGIALLGVAFMFGVSWLLTRTVLSGEATSFSLELPPY
                     RPPRVLQTLYTSLIDRTLIVLWRAVVFAAPAGAVIWLISNIDIGGVSIARHLISDLTP
                     FGLLVGLNGVILLAYIVAIPANEIVIPTVLMLTVLATNAVGVGAGTGVMFELDSTQAV
                     GDLLRAGGWTVLTAVNLMLFSLLHNPCSTTIYTIYKETGSAKWTTVATLLPLVLGFVV
                     TFLVTQVAGLL"
     gene            complement(9297..>10188)
                     /locus_tag="VGA78_18630"
     CDS             complement(9297..>10188)
                     /locus_tag="VGA78_18630"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HEX9895955.1"
                     /translation="HLYDCEIRGLPGSLEELAGMLETGRGKAHRILGRALQMELVTLE
                     QQGYALTATGRAYALRVLRTHRLLERFLADRTGMAPDRWHAEAEQREHLLSEAETEKL
                     AHRMGHPLFDPHGDPIPTATGEMPVASGFPLSRVAPGSFVTVVHLEDEPAEVFQCLLD
                     AGLALGQVFQIHEVTRERIAYAVDGQDRSLARALAANVTVETVSQAGASDPRVTTLDT
                     IELGQSAAVVGISPLCHGPQRRRLLDLGVVPGTTIRAVMRSAGGSPIAYDIRGALIGL
                     RREQAEWIRVRRDQESGAAA"
BASE COUNT         1875 a         3397 c         3342 g         1574 t
ORIGIN      
        1 gagcgctcgg tctccacctg gaccttcacc ggttcccccg gcttgaacga acggttgctg
       61 ttgatccaga gcctgacagg gtcggccgca ccgggcgaac cagcggccga cgcgggctcg
      121 agcgccgaaa gggcagcgag aagcagagtg atcatcatgg gccacctccg ggcaaccacc
      181 gaagatccag aatcatgcca cgcggcggtc agccctaagt agtggtgaaa caagatgttg
      241 ggtgtgcaga tcctgaatcg tttccgtccg ctccgagtga cagatgtcct ccgatcggac
      301 aggggattca gacctcccgg cccccgctcc accgatgcca gtacattcgc atttcggtga
      361 tttttccgcc agcagtctcg cagaatatcg ctccgcgggc ttcgacccat tcgccggttc
      421 ggcgacgccg gaacttcacg ttgaattcgg tcgagaacca cggtcccgct gaatagatct
      481 cgccggtact gcaattgatt tccgactggt gatagggaac atcggcccac cagcgcctga
      541 tggcggcgag cccctggagc ggctgggaaa acggggtctc gatgaagacg gcatcgtccg
      601 caaagaccga acagagcgtg tccaacctgg ccttagtcca accctccgca aatttgtcag
      661 tcagctcgcg ccccagcgcg cgagtatcgc tggagtcgct atgcacgggt agatgggcga
      721 aggcagagga gcagtcgagc cagctcgtgg ccgatgatct gcgaccggcc gccacgctcg
      781 atcgtcaagg gcccgtcgaa cggttgccgg gccatcactc tgatcgcggt tccgggagtc
      841 agccccatgt cgctcagata ccgcagtcgc tcggcatgac tggtatcgac ccggtgaatc
      901 tcggcggtct ccccctccgc tacctcactg agcgggacgt agcgcggctc ctctacatgg
      961 ccttgagcgt cgggaatcgg gtcgccatgg ggatcgaact gcggattccc caaggcctcc
     1021 gccatgcgtt cgatcagcga ctccgagacc gcgtgctcca gccgttccgc ctcttcgtgc
     1081 acgctgtccc aggtgtagcc cagcagcgcc accaggtagg cctcgatgat ccggtggcgg
     1141 cgcaccatgc ggagtgcggc ccggcgacct tcatcggtca gggccactcc ccgatagggc
     1201 acgtgctcga gcaaacccag ctcggacaag cgccggatca tcccgctcac cgacggagga
     1261 gccaggtcga gggactgggc gatggcgctg gtgctggccg gctgtccgtc aagcgacagg
     1321 tgatagatcg ctttaaggta gtcctcgacc gagcgggtca ggggttgttg ctgtgcggcg
     1381 gcgttcacaa cctaaaagta tgtcgcgaga ccgaagagga tagccgcggt ccgctcggcc
     1441 gggttgccca gcaggtcgcg actgctggcc agccggtaat tagcgcgaaa aaccgtgccg
     1501 gccaccggac ggaacgacag gccgagcgtc gcggcggcga cgtcgtcacg ccgcggctga
     1561 ccggttgagg caaaccggcc caggttgaag tccacccgct cgatccgcag gcccagcagg
     1621 accacgggtg actccaggcc ccgaatccgg ggatggatga cgggcataac cgcatcgagg
     1681 taggctcccc actgccgatc ggccagcacc tccctcaact ccggggcgat atccagcgcg
     1741 gcgagagcgg tctcgcctcg cagggtgacc gggccgaccg tggtttccac atcgagcgcc
     1801 gtcaacgaca gccagcgggg ctcatcgatc cgctgcccct cgacccgcca gcgattgtag
     1861 acgccccggt agtgtgaaag gccgatctcc cccagccggg acgatcggag gccgatgcgg
     1921 cccgaaacgg cgggcgatcc gttctcatcc tcggcgaaga gcgattcccc cttgccgctc
     1981 ggcagatggg tgcgtcccgc cggattgaga atcacgcctt ctcccagacc gttggtcagg
     2041 tacaggtcgt aggagaccga gaggccgcgc ggggccagtc ggccgtgcac cccgaatccg
     2101 acttcggaga gcgtggccgg aatgatctcg gtggagacga acggccggtc gacgaactcg
     2161 tagcgggggc cgtcgtggtt gacgttgaag gcgccgatcg gcggcagcag cacgccgcct
     2221 cgaatcacca gtgaaggggt caccatgaaa tcgagcagcg cggtctcgag cgctatctct
     2281 tcggtcccat gctcgaactc gagctccgag gtgaaccgga gccggcggcc ggcggaggaa
     2341 aacaggaaga tgttgaagcg gcgaacctcg aaggatgggc cttcattgat gccttcggtg
     2401 cgggaccagg ccacgttggc ctcgaggtat ccgccgacgg ccgtgcgtcc tatcgctgcg
     2461 atgaagggac ggcgatagat gctcccttgg accagggtcg tgtcctgggc atgcacgagc
     2521 gccggcacca ggaccagggc cgccagcagc ggcgccctca ctgttccacc ggggccaatt
     2581 cgatcaacag ccgctcacca tcgacccggg tcgagaagcg gcgcaggggc agcggtgtgg
     2641 gtcccttgag tatcgcgcca tcattggtgt attcgctgcc atggcaggga caaaccagat
     2701 ggcccgccac cggctccacc tgacagccga ggtgcatgca ccgcgtcgag accgcggtgt
     2761 aggacccgtc atcgtggcga tacacgtaca agggcagtgg ttgagccggt gtgtccacca
     2821 ggacgaagcg gtcactcccg aaatcgtcgc gccgaacggc cagctgattc ccgatcagag
     2881 tggcattcac ataagggaat gggatgcatc cggtgagctg aagacccagc gagccggcca
     2941 ccgccgcggc ggaggcggct tcgagctgtc ccaggaagcg gcgccggttc acagtgacct
     3001 caggaaggcc aacagctgct cctgctgtga gggcgagagg gcccggaaag cggtccggct
     3061 gccggcccct tcgccgccgt gcagctcgat ggcctggcgc agggtccggg cccggccgtc
     3121 gtgcaggtaa aacgcctcgc ctccctgcga ccgatcggcc agacccagac cccagagcgg
     3181 cgtagtgcgc cactcggacg tgaaggcccg cccttcggtg tagccgtcat cgagctccgg
     3241 ccccatgtca tgcagcaaca gatcggtgta ggggtggaac tccaggttgc tcaaggcggc
     3301 gagcgaggac ggaccggtgc gcagggtcgg cagatggcac ttggcgcatc ctacactgga
     3361 gaaaagcccc tcaccagcaa ccacatcggc cgcctcggga ccgcggcgag gcggcgtccg
     3421 cagcgttctc agatagaaaa ccaccgcctg cactgtgctc gatggcacct cgggttcggg
     3481 tacatcgtca ccagtgaacc cgcccacctg caggttgacc gggtcaaagg gcagaatgtc
     3541 ggtggagagg cccatgtcct gctggtaggc ggtcacggtt tgatgcagca gcgagatggc
     3601 ggccgccttt cggccgaaac gccccacgta ttggttggcg atgcgctggc gggcggaagt
     3661 cgctccgtcc agaaccgcct ccagccggtc gatctcgatc acgacatccg actcgtccac
     3721 caactgcacc cggcccgaga caccgtcccc atccaagtcc tccggatctt ccagatcgag
     3781 gagggtctgg tccgaaaccg cctcgaggta ccccagcccg gtgacggctg gcgccagcaa
     3841 tcgggcgacc ccggtggcct ctcccggcac gacctcagcc gtatagcggg gaatggcgcg
     3901 atgctgtaac tggggcccgc ccatgccccg catcggatcg aatcccaggg cggtggcccg
     3961 gccgaaccgg gtgagggaaa agaccgggtg tcccttgccg tcgcccgggt ggcaccgttc
     4021 gcaggcggcg gcaatgaaga tcgggcccag cccgtcaccc acggcgaagg ttcggccgaa
     4081 ctcctcatcg cccctgacgt gctgagtcag ttgggggccc gaaagcccat caatcgggcc
     4141 ggcgaggacg ttctgatcct caggcaggtt ggtcagtagg gcatcgcagc caagggcgag
     4201 ccagcaggac aggagtgtca gccgtgtcgc ccggccgaag ggccgtgagg tcctcaccag
     4261 cggttttgaa gtcatggctc aaatcttagt gtctatgatc gataattcaa tattagtgct
     4321 acctaagtca ctgtcacgac attagaccga cagttaggca atttgttcat ttacaatgac
     4381 ttgggaaggt gcatcgcgcg caggccgttc gtaatgacgg ccagggaagc ccccatatca
     4441 gccgccaccg ccatccacag agtggcctgg cccagcaccg ccagcaccag aaacaccgcc
     4501 ttgatggcga gggcgaaggc gatgttctgt cggacgatgc cgaccgtgcg gcgggagcgg
     4561 cggatggtct cggccacctg actcaggtcg tcgcccatca ggaccacgtc cgcggtctcc
     4621 agggccacat gggttccggc gccacccatg gctacgccca ggtcggcggc ggccagcgcg
     4681 ggcgcgtcgt tgacgccgtc gcccaccacc gccactcgtt ccccgtcttg ccggagctgg
     4741 gccaccgcgg cgtgcttgtc cgcgggcagc agaccggacc gcacgtcagc gtcgagaccg
     4801 atctggtggg ccacactggc cgcgacagcg gcgttatcgc cggtgagcat cagcactcgc
     4861 cgcaccccgg tcttgcgcag ggcggcaacg ctttcgcggg cccccggccg cggccggtcg
     4921 gcaatggcga gcacaccgag cggctcgctc gcgtcggtga ggagcatggc gctcttccca
     4981 tgcgactcga ggtcggccac ggcgtcgtgg accacttgcc ggcaagtccc caactcggca
     5041 cagatccgaa gatttcccac aaagagccgg cggccctcga cctcggccca ggctccgcgt
     5101 ccgggcagcg cggtgaaacc attcgaagcc ggcggttgga tcccctgagc ccgggcttcc
     5161 gcggctatcg cgcgggcgac cgggtgttcc gaatggtgct cgacggcggc ggccaggcgg
     5221 aggatttcac ggggtccgag cccgttcacg gatagcacgt cggtgaccac cggccgcccc
     5281 tcagtgaggg taccggtctt atcgaaggcc acggtggtga cccgcccggc ggcctccagc
     5341 tgagacccgc ctttgatcag gacgccggca cgggccgcac cggtgagacc gctcacgatc
     5401 gtgaccgggg tggaaatgac cagggcgcag ggacaggcga tgacgagcag tgccagcgct
     5461 cggtagagcc atgtccccca ttcgcccgcg gcaaccagcg gcggcacgac ggcgatgagg
     5521 gcggcgaggc caaccacggc cggggtgtag cgccgggcaa accgatcgac cagagactgg
     5581 gtgggtgcgc gcgaggcctg ggcctcctcc accgcgtgca ggatgcgcgc gagagtggtg
     5641 tcctcggcgt gactggtgac cgtgatgtcc agcgcgccgt acccgttgat cgagccggca
     5701 aacacctcgc tgccggcctc cttgtcgacc ggtatcgact ctccggtaat gggcgattgg
     5761 tccaccgccg aaacgccagc cgagaccacc ccatcgaggg cgacccgttc gccggggcgc
     5821 accacgacga cttcgccgat ctgcacatcg gctacgggca cggtgatcac cgtgccccca
     5881 cgacggacgg cggcctcgcg aggcgccagc ttcaccaggg cctggatggc cttacgagcc
     5941 cggctcatgg cgaagctctc gagcaactcc gcgaccgaaa agaggaacat cacggcggcg
     6001 gcttcggccc actggcccag caccatcgcg cctgccgcgg cgatggtcac caagacattg
     6061 atgtcgagcg cgacgtcgcg agccgaacgg attcccttgg gaaccacgta ccaagcaccc
     6121 gccactactg aaagcaggaa aacgggaatg ggtgacaggg cgacactggt ccagcccatc
     6181 acctgccctg ccagcagcag gagaccggac gctcccgcag cgatcaggcg cccccggtcc
     6241 acccccctgg catccacggt ctgctcctgc accgagtacc ccgccgagcg gatcgccaag
     6301 gcgagatcgg cgttgccgta ccccgcctcc cggccgaccc gcacagtgcc ccccatgacg
     6361 tccacctgca ccccccggac gccgggcagc ggtcgcaccg cccgttcgat cgcggcggcg
     6421 caactggcgc agtccatccc cgccactcgg aactcccgaa ccggggcaac ggagctggcc
     6481 acgacgccgg aaccgctaaa gctgctcttc gacatgctcg aatccatcgg caagaagccg
     6541 gccgatgtgg tcatcgtcga gccggtagta gatggtcttg ccgtccttgc ggctgcgaac
     6601 caaccgcagc tggcgcagca ctcgcagcga atgggaaacc gccgactggc tcatccctaa
     6661 cgccgccgcc agatcgcaca cacacagttc ggcccgggag agggcgtgaa ccaggcggag
     6721 ccggttggga tcccccaggg cgcggaaggt ctccgccagg aggaggaccg cctcggcggg
     6781 cttcatttcg tttctggtgc ggcggacctt ctcgaggtcg gtgaccttca cctcgcagag
     6841 gtcgtcgccc gccagacggg ggcgaatcac tgtcattggc tcaactccga acacctgaac
     6901 aggtgttcat atgtaactcg acatctgggc ttgcgcaaga gatccgttta cgggtgaacg
     6961 gtcaacagtg aacggtcaac agtgaagggt caccccgccc agtccttcga aactgttcac
     7021 cattcaccgt ttaccgttca ctgcttacag aaggccggcc acctgggtaa cgaggaaagt
     7081 caccacgaaa ccaaggacca ggggaagcag cgtcgcgacg gtggtccact tggcgctgcc
     7141 ggtctctttg taaatggtat agatggtggt ggagcacggg ttatggagca ggctgaacag
     7201 catcaggttc acggctgtca ggaccgtcca gccgccggcc cggagcagat caccgaccgc
     7261 ctgagtggaa tccagctcga acatcacgcc ggttccggct cccacaccca ccgcgttggt
     7321 cgcgagaacc gtgagcatca gcacggtcgg aatcacaatc tcattggccg gaatggccac
     7381 gatgtaggcg agcaggatca ccccgttcag cccgaccagc agcccgaagg gggtaagatc
     7441 cgaaatcagg tgccgggcga tgctcacgcc cccgatgtcg atgttggaga tcagccagat
     7501 gaccgcgccg gccggagccg cgaagaccac ggcccgccac agcacgatca gagtgcgatc
     7561 gatcagcgag gtatacaggg tctggagcac gcggggcggc cggtagggcg gcagctccag
     7621 gctgaagctg gtggcctcac cgctcaacac agtgcgggtg agcagccagg acacgccgaa
     7681 catgaaggcc acacccaaca acgcgattcc gacgaccgcg ccggcggcag tggcactggc
     7741 caggtgagcc ggcgccagag tacccaggaa gatggtcgca atcagaatct gggtaggcca
     7801 acggccgttg cagagcgaga agttgttggt gatgatcgcg accagccgct cccgggggct
     7861 gtcgatgacc cgggtcgcca ccacgccggc cgcgttgcag ccgaagccca tgcacatggt
     7921 cagcgcttgc ttgccgtgcg cacccacccg ctggaacatg cgatcgagat tgaacgccac
     7981 ccgcggcaga tagccgaagt cctccagcag cgtgaacacc gggaagaaaa tcgccatcgg
     8041 cggcagcatg acgctcacca cccacgccgt cgccaggtac acaccgtcga acagaaaacc
     8101 ggacagccac cagggcatcc cgatgccggc gccgaattgg cgcagcaggg gatggagctg
     8161 gtcgatcagc accgacgcga gcatggccga aggcaggttg gcgcccgcga ttgtgagcca
     8221 gaagacaccc gccagaatga gacccatcag cgggaagccc agccatttgc tggtgagcat
     8281 tcggtccagg gtccgatcga gatcgaactt cgcgcgacgc gctccccgca gctcgctgcg
     8341 actggcgatg gcctgggccg cggcgtagat gctctccatc aagcggtcgt gaaaatccga
     8401 cggcaagcgc caacggaggc tacgggccgt ggccagcacc gcttcggcgt ccagggttgc
     8461 ggccccctgg tccgacggct gccacggctg gtcctggttg tcgcccagaa acacaccgat
     8521 ctcaccactg cgtaccgccg cctcgatgcg ctcgtcggcg ttgagcagcc ggaacgccac
     8581 ccagcgggga ttgggcagcc cagggaacgc ggcttcgatg tcggtcacca gctcggccac
     8641 ggtcgcttcg atggcgggtg gatgattcct gatccggaac ggggtggtac gctcggcccc
     8701 ggtggcaacc cgttcgatgg cctcgagcag ctcgggcagg ccttccttcc ggcgaatggc
     8761 cgctgccact accggcacgc cgagctcgcg cgcgagccgc ttggcgtcaa ccgcgatgcc
     8821 gtggcgtcgg gcctcgtcca tgaggttcaa gcacactacc acgcggtcgg tgaactccag
     8881 gacctggagc accaggttga gattgcgctc cagccgagtc gcgtcgacca cgacgacggt
     8941 aacgtcgggc tccccgaaga gaatgaagtc gcgcgcgact tcctcgtcgg tgcttccggc
     9001 ctgcaatgag taggtaccgg gaaggtcgac cagcttgacc ttcttctggt tgtgctcgaa
     9061 ggtcccttcg gctcgactga cggtcttacc gggccagttg ccggtgtgct gccggagtcc
     9121 ggtgagggaa ttgaaaacgg tgctcttgcc ggtattggga ttgccggcca gggcaacgag
     9181 ataatcccag ctgccgaccg agacacccag ctgcaccagg ttggcggtgc gattggcact
     9241 gcagccgcgg cacccggggg tcgacgcgcc ggatggcagt accggaagag cggaggtcat
     9301 gctgcagccc ccgactcctg gtcgcggcgg accctgatcc attccgcctg ttcccgacgg
     9361 aggccgatga gagcgccgcg aatgtcgtaa gcgatcgggc tgccgccggc actccgcatg
     9421 acggcccgga tcgtggtgcc gggcaccacg ccgaggtcga gcagtcggcg acgttgcggg
     9481 ccgtggcaca ggggcgagat cccgaccacg gccgcgctct ggccgagctc gatggtgtcg
     9541 agcgtggtga ctcggggatc gctggcgccg gcctggctga cggtctccac ggtcacgttg
     9601 gccgcgaggg ctcgggcgag acttcggtcc tggccatcga ccgcgtaggc gatccgctcc
     9661 cgggtcactt cgtgaatctg aaacacctgt cccagcgcca ggccggcgtc gagcaggcac
     9721 tgaaacacct cggccggctc gtcttccagg tgaaccaccg ttacgaagct gccgggagcg
     9781 acccggctca ggggaaaacc actcgccacc ggcatttcgc cggtagcggt gggaatcggg
     9841 tcgccgtggg gatcgaacag ggggtgaccc atccgatggg ccagcttctc ggtctccgcc
     9901 tccgagagca gatgttctct ctgctccgcc tcggcatgcc aacgatcggg agccatgccg
     9961 gtgcgatcgg ccaggaaccg ttccagcagc cggtgggtcc gtaatacccg gagggcatac
    10021 gcccgtccgg tcgcggtcag ggcgtagccc tgttgctcga gtgtcaccaa ctccatttgc
    10081 agcgcccgcc ccagaatccg gtgtgccttg ccccgcccgg tctcgagcat ccccgcgagc
    10141 tcttccaaag acccgggaag gccccggatt tcgcagtcat agaggtgc
//
LOCUS       DASWKS010000654         1527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_355812, whole genome shotgun sequence.
ACCESSION   DASWKS010000654 DASWKS010000000
VERSION     DASWKS010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355812"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1218)
                     /locus_tag="VGA78_18635"
     CDS             complement(<1..1218)
                     /locus_tag="VGA78_18635"
                     /inference="COORDINATES: protein motif:HMM:TIGR01826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconeogenesis factor YvcK family protein"
                     /protein_id="HEX9895956.1"
                     /translation="MRTPRLPRWLYPGMHLKRWMGAVLLGLTILALGAAILLIEIYRE
                     FILDFPDIALLLGAGLERPIRAAIVLVVGVALTGFGMWKLMHSVISPFVARGDSVMEV
                     LYTKRYLARGPRIVALGGGTGLSTLLRGLKAYSANITAVVAVADDGGSSGRLRQQLGI
                     VPPGDIRNCIAALADAEPLMTQLMQYRFPPGSGLDDHAFGNLFIAAMTAVTGDFDEAV
                     RESNRVLAVRGQVLPATSVPLNLTAHLASGRLIRGQAAVSRATEPIARVQIDPPDVRA
                     TPEALERILEADLIVIGPGSLYSSVMPNLLISDIHDALSAADGLRVYVCNVATQPGET
                     GGFTASRHLTTLFEHVGDQLVDIVLLNRNRSARRPVGWLGEPVQLDIRQLEELPVVVV
                     EDDLIDDQNAHHHD"
     gene            complement(1215..>1527)
                     /locus_tag="VGA78_18640"
     CDS             complement(1215..>1527)
                     /locus_tag="VGA78_18640"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEX9895957.1"
                     /translation="VFDVRFLTNPFWVPDLQPLSGLSAPVRRFVLEQPQAERFLDLVV
                     QLLELTVPAYRAAGRERLTVALGCTGGYHRSIALAEELAGRLGGLEGASVSVMHRELR
                     R"
BASE COUNT          251 a          519 c          548 g          209 t
ORIGIN      
        1 atcgtggtgg tgcgcgttct ggtcgtcgat gaggtcgtcc tcgaccacga ccaccgggag
       61 ctcctccagc tggcggatgt cgagctggac cggttctccg agccagccca ccgggcggcg
      121 agcggaccgg ttccggttca agagcacgat gtccacgagc tggtcgccga cgtgctcgaa
      181 cagcgtcgtc aagtgccgcg aggcggtgaa gccgcccgtc tcgccgggct gggtggcgac
      241 gttgcacacg tacacccgga gcccgtcggc cgcggacagc gcgtcgtgga tgtcactgat
      301 cagcaggttg ggcatgacgc tcgagtacag gctgccgggc ccgatgacga tcaggtcggc
      361 ctccaggatg cgctccagcg cttccggggt ggcccggacg tccggcgggt cgatctggac
      421 ccgggcgatg ggctcggttg cccggctgac ggcggcctgc ccgcgaatca atcggccgga
      481 cgccaggtgt gcggtcaggt tgagcgggac gctggtggcg ggtaggacct ggccgcgcac
      541 cgccagcacc cggttcgact cgcggacggc ctcgtcgaaa tcgccggtca ccgcggtcat
      601 ggcggcgatg aacaggttcc cgaaggcgtg gtcgtccagg ccagaccccg gtgggaatcg
      661 gtactgcatg agctgggtca tgagcggctc ggcgtcggcc agggcagcga tgcagttgcg
      721 gatgtcgccg ggcggcacga tccccagctg ctggcgcagc cggccgctgc tgccgccgtc
      781 gtcggccacc gccaccaccg cggtgatgtt ggccgagtac gccttcagcc cccggagcag
      841 tgtcgatagc ccggtcccac cgcccagcgc cacgatccgc gggccccggg ccaggtaacg
      901 cttggtgtag agcacctcca tcaccgagtc gccgcgggca acgaagggcg agatgacact
      961 gtgcatgagc ttccacatcc caaacccggt cagggccacg ccgaccacca gcacgatggc
     1021 ggcccgaatc ggccgctcga gcccggcgcc gaggagtagg gcgatatccg gaaagtcgag
     1081 gatgaactcg cggtagatct cgatgaggag gatggccgca cccagggcca ggatggtgag
     1141 gcccagcagc accgccccca tccagcgctt gagatgcatg ccggggtaca gccagcgggg
     1201 caggcggggc gtcctcatcg gcgcagctcc cgatgcatga ccgataccga tgcgccctcc
     1261 agcccgccca gccggccggc cagctcctcg gccagcgcga tggagcggtg atagcccccg
     1321 gtgcagccca gcgccacggt cagccgctcg cgaccggccg cccgataggc aggcacggtc
     1381 agttccagca gctgaacgac gaggtcgagg aagcgttcag cctgcggctg ctcgaggacg
     1441 aatcgccgga ccggcgccga cagcccggac agcggctgca ggtcgggcac ccagaacggg
     1501 ttggtcagga atcgaacgtc gaacacg
//
LOCUS       DASWKS010000655        13338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3659671, whole genome shotgun sequence.
ACCESSION   DASWKS010000655 DASWKS010000000
VERSION     DASWKS010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3659671"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2281)
                     /locus_tag="VGA78_18645"
     CDS             complement(<1..2281)
                     /locus_tag="VGA78_18645"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX9895958.1"
                     /translation="MRNLLASTRSCVLACLTLLLVPAVPALAQNAVIRGTVTSADGKQ
                     ALAGVNVVITGLNISVLTSDRGAYLITIPAARIPAAPVNVTARAIGYKAIQRGTLIRA
                     GEQVVDFALQADINRLEEIIVTGVLEGVERAKVPFSVGRLAAEDMPVSAVDPLRVLAG
                     KVAGLRVGATSGRPGTSPEIMLRGPRSINATGRSQEPLIIVDGVIQHVGSLQELGGLD
                     IETVEVVKGAAGSSLYGTQAANGVITITTKRGMGAREGVVFNVRTEVGVSDFSGFDYG
                     LPTNHPLQLDETGKRFCVTGISGALPCSRSVDLMTEMLRINNVNADTLRTPQNILYGA
                     PGIADLLNIFQSQIYPNQYYNSLVRIADRTPTSLTSVDATGKVGNVGFYVSGQFTRDP
                     GGVRFFEGSDQVRGRVNLDYQARQDLTVSVSTMYNDFYRDNRLTGIFGTLLRGGMPGF
                     DYLARDTLGRLLVSRGASGWRPTGNGSASVLYDGENRTTDLRTNRFLGSLNMKYFPTA
                     WVSLEGVFGYDSRTSRSDDYVIKGYRTTGISTANNNGNLDISRSKDEALNASLSATFR
                     RDITQDLTGKLRLGGYYDQEIFSTSRGTGQIFLVKDVPQLDNTSANQSVTSSSEDTKN
                     AGLSAAVTFDYKDRYIIDGSFRRDGSSRFGPDHRWASFNRIAGVWRTSEEPWWNLNFM
                     DDFRIRASRGTAGSTPRFSAQYETYNVGPNGISTVQAGNSKLEPEVTTEYETGLDFTL
                     FRRVGVEATFARANTRNQIL"
     gene            3398..3595
                     /locus_tag="VGA78_18650"
     CDS             3398..3595
                     /locus_tag="VGA78_18650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895959.1"
                     /translation="MQVIVDGVPIYRPGLLGRRPPDLKQWDLTTLRAIEVYQSSAEVP
                     AELAGGGATDCGTLVLWTRRD"
     gene            3737..4336
                     /locus_tag="VGA78_18655"
     CDS             3737..4336
                     /locus_tag="VGA78_18655"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF000595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEX9895960.1"
                     /translation="MLVGVDEVGRGPLAGPVVAAAVAFPPNAGRILRLRDSKVLTARR
                     REHLAALIQRRAVVFGIGASSARLIDRVNIRVATAIAMRRALARALGGSSRSPLPSPC
                     SRLAILVDGLWFRELGVDHEALVDGDALCYSIAAAGVVAKVVRDRLMQRLAQRHPAYG
                     WESNMGYATAEHLAAIQAAGPCRHHRRSFTPVTQTRLAL"
     gene            4548..4620
                     /locus_tag="VGA78_18660"
     tRNA            4548..4620
                     /locus_tag="VGA78_18660"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4581..4583,aa:Lys,seq:ttt)
     gene            4757..5110
                     /locus_tag="VGA78_18665"
     CDS             4757..5110
                     /locus_tag="VGA78_18665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895961.1"
                     /translation="MKIKDTAAMKVQLDSLTRFTLLRPGPNGTRVVALTGNDFVRVAG
                     QPGGPVYDEPIRNPRVQVDGDLATVWAEYQVRQQGTVSHCGFDAFHLARLNGRWKILN
                     VSDTFRREGCGNPWP"
     gene            5222..6130
                     /gene="ilvE"
                     /locus_tag="VGA78_18670"
     CDS             5222..6130
                     /gene="ilvE"
                     /locus_tag="VGA78_18670"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF006185.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEX9895962.1"
                     /translation="MTTIWLDGEWLDRDTAKVSVFDHGLLYGDGVFEGIRVYGGKVFR
                     LAEHMDRLYASARAVNLDIGISKTDLTAIVEDAVKRSGLREAYIRPLVTRGVGDLGID
                     PRNCARPTVMVIVDTIRIWAEDRYDKGLACVTAATPIPHRESLSPRVKSLNYLPHVLA
                     KMEGNVAGADEIIMMDSSGHVCEGSGQNLFVVNGRTLRTPPPNAGILVGITRNAVMEL
                     ALHAGYAVREEMLNRYDVYTADEAFLTGTASEIVGLRSLDGRSIGAGKPGPVTRDLMA
                     RFRELVRADEPRTRQGVEGRVARVES"
     gene            6151..6408
                     /locus_tag="VGA78_18675"
     CDS             6151..6408
                     /locus_tag="VGA78_18675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895963.1"
                     /translation="MLTTVPLPNLRRVAATLAGVRGRSIVDATLTTDLRQLRLTLDDG
                     ELLVIRVEAGDLGRDHLEVDVVRPGDNHHEQLELEQTRAVE"
     gene            6646..7068
                     /locus_tag="VGA78_18680"
     CDS             6646..7068
                     /locus_tag="VGA78_18680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895964.1"
                     /translation="MSATIPMSVTRERPRFARFRLDRLPNGRCRAEVVLIWRERGQVR
                     GTAEGIASPSGELRCAAQACLNALAQVVQETAFEVLGVKAVRAFDENVVIVSLAMRGL
                     GAGPRLVGSCLAGEKLARGAAVAVLNATNRLISRREAA"
     gene            7168..8721
                     /locus_tag="VGA78_18685"
     CDS             7168..8721
                     /locus_tag="VGA78_18685"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEX9895965.1"
                     /translation="MRRPLRPIFVLALAAATACASQGTIASAPRAPAPEAVPSQAVPA
                     DTHPPIPETPAILLSDSLLERRLSQDSAADVAILEALAAATPPSTAPATQNGDPLDAL
                     SEARAVSLDLTTYADHDRVRYYLDFFQGPARSRMAVWLQRMPVYETMVRERFQAAGLP
                     SDLVYLGLIESGFSNVATSRSRAVGMWQFMRGTGRWMGLRVDRWVDERRDPVKATDAA
                     ARYLSMLTQQFGGSYFLAAAAYNAGPGRVSRGLSRLGTSAPGGSDESDEDEEEEDGLR
                     DEHFFSLADSRYIRRETKDYVPKLIAASLIGRNPSAFGFPPPAAMDLFPRDSLVVREM
                     TGLDVVAKLAGVPPATIRELNPHYLRRATPPRSTSVVRLPAGTQERVGEAYAALPAKE
                     RAGASAASLRDVDAAETSTRIHRVRSGETLGSIAQRYRVSVSSLRKLNRLGKSNLIRV
                     GQRLKVSGGTVAASSRTASRPEVHVVRRGETLSALARRYGVSVQALMSANEMSSSRLR
                     AGQKLRIPT"
     gene            complement(8786..9499)
                     /locus_tag="VGA78_18690"
     CDS             complement(8786..9499)
                     /locus_tag="VGA78_18690"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX9895966.1"
                     /translation="MLHADLTPQGGRPGWVRIILTELSLLAVASVLVGAAIALSGQLV
                     SGPPAPAAPLAPATLSAVNEDRGPRGDLTATRLLLERATTVLSNANKFGIATDLSAAI
                     YDVAAEEGISPELAYQLVKVESNFRRAAESDAGALGYTQVRLATARGYLPEATVKDLH
                     HRDTNLRLGFRYLRDLLRRFDGDLTLALVAYNRGPTLVDSISASGGDPRNGYAKLVLT
                     GVRGEVKAAPAVLRRGASD"
     gene            complement(9533..10015)
                     /gene="moaC"
                     /locus_tag="VGA78_18695"
     CDS             complement(9533..10015)
                     /gene="moaC"
                     /locus_tag="VGA78_18695"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF014070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEX9895967.1"
                     /translation="MRLTHTDERGAARMVDVGDKPVSLREAAAQGQVRMSAEAFALVR
                     DNAVAKGDVLAVARLAGIAGAKRTADLVPLCHPIALDVVEVTAEADAELPGVRISARA
                     KATARTGVEMEAMAAVAAACLTVYDMVKAVDRGMRIEAIRLISKTGGTRGDWTAPGDD
                     "
     gene            complement(10006..11103)
                     /locus_tag="VGA78_18700"
     CDS             complement(10006..11103)
                     /locus_tag="VGA78_18700"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895968.1"
                     /translation="MAILPLVGHAAAREHVSRAIQSGTIPQTLLIAGPDGVGKQRFAL
                     WIAQRLVCTRPGSPEPCGECLPCRKVLGLVHPDVHWFVPIQRPKAGEPDKQVEEAAEA
                     LAEVLEERRQRPLWGEPDGMWSHGIPSARLLLKRVSLTPVEATRKVFIVGDAERLIAQ
                     AGAEDAANALLKALEEPPADTVVLLTAGDPRRLLPTIRSRAVMLRLGRLSDEEVRGFL
                     GSYLQPKLSPAGLNERVAAAEGSIGAALAEDGSVARYREAAAGLVEAALAGGKQSYER
                     ALRQPPYQARGDFAAMLDALSALLGDAARERAGEVPRRAVPRALKGRELSGLVLAAEK
                     VQVAREAAQGNVNPQLVLVTLALELEEALCA"
     gene            complement(11533..12162)
                     /locus_tag="VGA78_18705"
     CDS             complement(11533..12162)
                     /locus_tag="VGA78_18705"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX9895969.1"
                     /translation="MSLRDALEPLRAARRPSDVVITTMGPAREWMALGPTHPLDFVFV
                     PSAMGHATSLGLGLALSRPDRRVIVVNGDGSLLMNLGSLVTITAERPPNLIVLVCDNG
                     VYEVTGSQPTPASPGGRAADDRVDFLGLARATGFNSLFRFSSREHWTAGLETVLNTPG
                     PTFTELEVSGDPEARGPRSPGPTIDRAARFMDALRNSVDSTVPQEPWNR"
     gene            complement(12180..12665)
                     /locus_tag="VGA78_18710"
     CDS             complement(12180..12665)
                     /locus_tag="VGA78_18710"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX9895970.1"
                     /translation="MFTGRQIVSLLNQLGITHVVTLPDSTIGAWEEAIIGSGTLRLVR
                     VCREGEAWSVAAGLYLGGATPFVMIQCTGLFESGDALRNVLHDWKLPILSLIGYRSYF
                     NQEALPGDTCLVFTEPILKAWNIDYRLITQPDAESVLGHLQACRVAGTAGAVLLAEGR
                     A"
     gene            12778..12984
                     /locus_tag="VGA78_18715"
     CDS             12778..12984
                     /locus_tag="VGA78_18715"
                     /inference="COORDINATES: protein motif:HMM:NF039472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEX9895971.1"
                     /translation="MNDDAFNLSVRRFLKQFGVSAQRQIERAVAEALESGKLSGKETL
                     RATAQLRLEGLDVDTTIEGEITLG"
     gene            complement(12986..>13338)
                     /locus_tag="VGA78_18720"
     CDS             complement(12986..>13338)
                     /locus_tag="VGA78_18720"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen-binding domain-containing protein"
                     /protein_id="HEX9895972.1"
                     /translation="TTVGLRWLVFAPRVNSPARPAAAAFGGFRVERGGPMVRLLMPAP
                     HAAGVELMGDFTDWEPVAMLPDSPGWWTLSRTLAPGIYRVNVRVDGGPWRVPPGIPAE
                     DDDLGGKAGVLLVP"
BASE COUNT         2226 a         4412 c         4346 g         2354 t
ORIGIN      
        1 gcagaatctg gtttctcgtg ttggcccgcg cgaaggtggc ttcgacgcca acccgccgga
       61 acagggtgaa atcgagaccg gtttcgtact cggtggtgac ctcgggctcg agcttggagt
      121 tgcccgcctg gacggtgctg attccgttcg ggcccacgtt gtacgtctcg tactgcgccg
      181 agaaccgagg ggtggacccc gccgtgccgc gcgaggcccg gatccggaaa tcatccatga
      241 agttcaggtt ccaccagggc tcctcggagg tgcgccacac tccggcgatc cggttgaagg
      301 aagcccagcg atggtcggga ccgaaccgcg agctgccgtc ccggcggaag gagccgtcga
      361 tgatgtaacg gtccttgtag tcgaaggtca ccgcggcgga taagccggcg ttcttggtat
      421 cctcgctcga ggaggtgact gactggttgg cggaggtatt gtcgagctga ggaacatcct
      481 tcaccaggaa gatctgaccg gtaccacggc tggtcgagaa aatctcctgg tcgtagtaac
      541 cgcccagccg cagcttcccg gtcaggtcct gggtaatgtc tctgcggaag gtggcggaca
      601 ggctggcatt gagtgcttca tccttgcttc ttgagatatc caggttgccg ttgttgttgg
      661 cggtcgaaat gccggtggtc cggtacccct tgatgacgta gtcgtcgctc ctcgaggtcc
      721 ggctgtcgta tccgaagacg ccctcgaggc tcacccatgc cgtggggaag tacttcatgt
      781 tcaggctgcc caggaaccgg ttggttctca ggtcggtcgt ccgattctcg ccgtcgtaca
      841 gcaccgaagc ggacccgttg ccggtggggc gccagccgct cgcaccccgc gataccagca
      901 ggcggcccag agtgtcgcgg gccaggtagt cgaaccccgg catgccgccc cgaagcagcg
      961 tcccgaagat gcccgtgagc cgattgtccc ggtagaagtc gttgtacatg gtgctgaccg
     1021 agaccgtaag gtcctgccgg gcctggtagt cgaggttgac ccgcccacgc acctggtcgg
     1081 atccctcgaa gaaccggaca ccgcccggat ccctggtgaa ctgcccgctc acgtaaaagc
     1141 cgacgttccc gacctttcca gtcgcgtcca ccgaggtgag ggaggtcggg gttcgatcgg
     1201 cgatccggac cagcgagttg tagtactggt tgggatagat ctggctctgg aagatgttca
     1261 ggagatccgc gatgccgggc gccccgtaga ggatattctg cggcgtgcgc aacgtgtccg
     1321 cattcacgtt attgatccgg agcatttcgg tcatcaggtc aaccgaacgg ctgcagggca
     1381 gcgcaccaga gatgccggtg acacagaacc gcttcccggt ctcatccagc tgcagcggat
     1441 ggttggtcgg cagtccgtag tcgaagccgc tgaagtcgga gacccctacc tcggtccgga
     1501 cgttgaacac cacgccctct cgggcgccca tgccccgctt ggtggtgatg gtgatcaccc
     1561 cgttggcagc ctgggtgccg tagagcgacg agcccgcggc gcccttgacc acctcgaccg
     1621 tctcgatgtc gaggcccccc aattcctgca ggctgcccac atgctggatg accccgtcaa
     1681 cgatgatcag gggttcctgg ctccggccgg tggcgtttat cgaccgaggc cccctcagca
     1741 tgatctccgg gctggtgccg ggccggccgc tggtcgcgcc gactctgagc ccggctacct
     1801 tgccggccag gacccgaagg gggtcaactg cgctcaccgg catgtcttcc gcggcgagcc
     1861 ggccgacgct gaagggcacc ttggcccgct cgaccccctc cagcacgccc gtgacgatga
     1921 tctcttccag ccggttgatg tcggcctgga gggcgaagtc caccacctgc tcgccggccc
     1981 ggatgagcgt gccgcgctgg atcgctttgt atccgatggc ccgggccgtc acgttcacgg
     2041 gggcggccgg aatccgggcg gcggggatcg tgatgaggta ggcaccgcgg tctgacgtga
     2101 gcacggagat gttgagcccc gtgatcacga cgttgacccc ggccagggcc tgtttgccat
     2161 ctgccgaagt cacggtcccg cggatgaccg cgttctgggc cagggccggc acagccggaa
     2221 ccagcaggag tgtcagacag gcaaggacac aggatcgggt ggaggccaac aggttacgca
     2281 tgggcaccac tcccccagag aagggtgaga ttgggaccgc aaaccgccgg ggaggcggat
     2341 actcccgact caggacagtc gagagaagag ctatttgacc ggccgaggaa cggtccaggc
     2401 cgggatcaga cctgtttcga tgataaggag tgtcgagtca ggctaatcaa gttccaagcc
     2461 aacctgcact cagccacgcc acggcttcac gcttgcactt ccagccggag ggtccgagga
     2521 actcgtgtca gtctgacact ggtcgcagtt ataacgacac gcaacggatc attatcggcc
     2581 gctcgaccgc tgggtgcgct ttcacccctc cagaacgcca aacctggtac ctgcactgaa
     2641 catgggcagg atggacaggc tgacggctcc agagatggcg ggaacgcctc cacattactt
     2701 ttgctggcgg atttgcggaa gagggtggtc ctttaaccga tcgtccttgc ggtgacgatg
     2761 gccgagtctc agattggctt gtcctctctg ttccggtgag tctggtgcac cccggctgtc
     2821 tctctcggcc cctcgtgaca tcagttttct tcctcggatc ggttcccggg gtcccctgcc
     2881 agacggtact gaccggggtg gtgcgggagg actcgtcgcg ccgcgcgctt gcgggcgtcg
     2941 aagtggtgct gctgggatat ggggtcacca ctaccagcga cgccgccggt cggttcgtcc
     3001 tggggcagct ccccgtgggc tatcaggtcg tgttgttccg gtcggtcggc tatgagccta
     3061 cctggtttcg gttcattgtc ggtaagaagc aggataccac ccgggcggag gcgaccctga
     3121 tcccattccg ggctcagcag ctggaaccga ttgaggtatc tgcccggtcc agaccgccgg
     3181 acccctttga cgccttcgag agccggaggc ggagagggtt cgggaagttc atcgactcag
     3241 ccacaatccg ccgaaacgag tttctgtctc tcgaaagcct gcttcgtcgg cacaccagga
     3301 ttgacgcccg gacggtctac atcccgagcg agagaaggta cgaggactgg gccatcagcc
     3361 gccggaaccg cggacatgtg gtcgaacgcc gtgctatatg caggtcatcg tcgatggcgt
     3421 tcccatctac cgacccggac tgttggggcg gcgtcccccc gacctcaaac aatgggacct
     3481 caccacgctc agggccattg aggtctatca aagctcggcc gaggtcccgg ccgaactcgc
     3541 gggaggcgga gccacggatt gcggtacgct ggtgttgtgg acccggcgcg actgagggcg
     3601 gtactctccc tgtcatctcc gtgcctgttt cgcgatcttg ctggcaaagg tgtcttcaac
     3661 ccgctgaggc cagcaccgat ccacgatgaa agccccaacc atttcacggg aacgatgcgc
     3721 ctgggatgct gggcgcttgt tggtcggggt cgacgaggtc ggtcgcgggc cgctggccgg
     3781 accggtggtc gcggcggcgg tggccttccc gccgaacgcg ggacggatcc tgcgactgcg
     3841 cgacagcaag gtgctcacgg cccgtcggag ggagcacctc gcggcgttga ttcagcgccg
     3901 cgcggtcgtg ttcgggattg gtgcctcttc agcccggttg atcgaccggg tcaacatccg
     3961 ggtggccacc gccatcgcga tgcggcgggc tctggcccgg gccctgggtg gatcttcccg
     4021 ttccccgctc ccgtctccct gctcccggct ggccattctc gtcgacggac tctggtttcg
     4081 cgaacttggc gtggaccacg aagccctggt ggacggcgat gcactctgtt actcgatcgc
     4141 cgcggccggc gtggtcgcca aggtggtccg ggaccgtctg atgcagcgcc tggctcagcg
     4201 ccatccagcc tatggttggg agtccaacat gggctacgct accgccgagc atctggccgc
     4261 gattcaggcg gccggcccct gccgccatca tcggcggagt tttaccccgg tgactcagac
     4321 ccgtctggca ctgtagcaca gggggttcct ggttcccggt tccgggttcc gggtgcggtt
     4381 gagcgtgcgg tgcagggtgc cggggtgccc ggtgcgactg cgagccaacc cagcagagtc
     4441 gcttcgctca accggaaccc ggaaccgagt ccttgtgcct tcggcattgg gcactgcgca
     4501 ttctgcattc actcctccat cccacttcta ctattttccc tcctcccggg ggcgtagctc
     4561 aattggtaga gcaacgggct tttaacccgt aggttctggg ttcgagaccc agcgccctca
     4621 ctgaaggtgc cggtcacgag tcggcggccc gcttcgccaa ccgaaacaca gcaccacctc
     4681 acccccctcc ctcgcttcgg cgcagaagcc ggaggaacgc gaggtcctcg ccgccatcca
     4741 gtcctttctc gatgccatga agatcaagga caccgcggcg atgaaggtcc aactcgacag
     4801 cctgacccgc ttcactctgc tgcgtcccgg acccaatggg acccgcgtgg tggcactgac
     4861 cgggaatgac ttcgttcggg ttgccggcca accaggcggc ccggtctacg acgagccgat
     4921 ccggaatccc cgggtccagg tcgatggcga tctggcgacg gtctgggccg agtatcaggt
     4981 ccgacaacag gggacggtga gtcactgcgg ttttgacgcc tttcacctgg cccggctgaa
     5041 tggccgctgg aagatcctca acgtgagcga cacgttccgc cgggaaggct gcggcaatcc
     5101 gtggccgtaa ctccaagtgc tgagtacccc acagccctat ctccactcag tactcagtcc
     5161 tcacgactca gtactattag tgtggttccg gagttaattt ccagactccc acggagcgct
     5221 catgactacg atctggctcg acggtgaatg gctggaccgc gacaccgcca aggtgtcggt
     5281 ctttgaccac ggcctgctgt acggtgacgg ggtgttcgaa ggtatccgcg tctacggcgg
     5341 gaaggttttc cgtctggccg agcatatgga tcgtctctac gcctccgcgc gggccgttaa
     5401 cctcgacatc ggaatctcca agaccgatct caccgccatc gtggaggatg cggtcaagcg
     5461 ctccgggctt cgggaggcct acatccgccc tctggtgacc cgaggggtcg gtgaccttgg
     5521 catcgaccct cgcaactgcg ccaggcccac cgtcatggtc atcgtcgaca ccatccggat
     5581 ctgggccgaa gaccggtacg acaagggcct ggcttgtgtc accgctgcca cacccattcc
     5641 ccaccgcgag tcgctctcgc cccgggtcaa gtcgctcaac tacctgccgc atgtactcgc
     5701 caagatggaa ggcaacgtcg ccggggccga cgaaatcatc atgatggact cgtcgggtca
     5761 cgtctgcgag gggtcggggc agaatctctt cgtggttaac ggccggacgc tccggacccc
     5821 gccacccaac gcgggcatcc tggtcgggat cacccggaac gcggtcatgg aactggccct
     5881 acatgccggg tacgcggttc gggaagagat gctcaaccgg tacgacgtat acacagccga
     5941 cgaggcgttt ctcaccggta ccgccagcga gatcgtaggg cttcgctctc tggatgggcg
     6001 gtccatcggg gccggcaagc cgggccccgt gaccagggac ctcatggccc ggttccggga
     6061 gctggtgcgg gcggacgagc cgagaaccag gcagggtgtc gaaggtcgcg ttgcgcgagt
     6121 agaatcgtag accatttccg gctgactccc atgctgacga cggtcccgtt gcccaatctt
     6181 cgccgtgtcg ccgccaccct cgccggggtt cgggggcgtt ccatcgtgga cgcgacgctg
     6241 accacggatc tgcggcagct gcgcctgacc ctggacgatg gcgagctact ggtcatccgg
     6301 gtcgaggccg gtgacttagg ccgggaccac ctggaggtgg atgtggtgcg ccccggcgac
     6361 aaccatcatg aacagttgga gctggagcag acccgggcgg tcgagtaacg ggggcgaccg
     6421 ccccctgccc agtcggggca ttccgcaagg ctgagttaac ccaaacggcg tttgaccact
     6481 gcccggcccg ctggtccggc cggtccggat ccgggctctt gacagcgtat cggtatgccc
     6541 cgcatagggt ggcgggctcg gaacccggtt aggactcggg ccatgctagc catcaccagg
     6601 ctcggcacgg agttggcagt tagggagcct tgcctggtga caataatgag cgctaccatc
     6661 ccgatgtccg ttacccgcga acgaccccgg ttcgcccgat ttcgcctgga ccgcctgccc
     6721 aatggccggt gccgggccga agttgtgctg atctggcggg agcgtgggca ggtgcggggc
     6781 accgccgagg gtattgcctc cccgtcgggg gagctccgtt gcgctgccca ggcctgcctg
     6841 aatgcgctgg cccaggtggt ccaggaaacc gcattcgagg tcctgggagt gaaggcggtg
     6901 cgggcctttg acgagaacgt ggtgatcgtc tcgctggcca tgcgtgggct gggggcgggt
     6961 ccccggctgg taggttcgtg cctcgccggc gagaaactgg ctcggggcgc ggcggtggcg
     7021 gtcctgaacg ccaccaaccg tttgatcagc cggcgcgaag ccgcctgacg caacgcttca
     7081 ccgctccggg gcatctaccc ggagacggtc ggaagtgaat tcgtaaactg gtgttgcggt
     7141 actttcatca agcagggagg ccggcgagtg cgtcgaccgc tccgacccat tttcgtgctc
     7201 gctcttgcgg cagctacggc ctgtgcctcg caggggacca ttgcgtccgc gccccgggcg
     7261 ccggccccgg aggcggttcc gtcgcaggcg gttcccgctg acacccatcc tccgattccc
     7321 gaaactcccg cgattctgct gtcggactcg ctgttggaac gacggctgtc ccaggactcc
     7381 gccgccgacg tcgccattct ggaggcgctg gccgccgcca cgccgcccag cacagcgccg
     7441 gcgacccaga atggtgaccc gctcgatgcg ttgagcgaag ctcgtgcggt ctcgctcgat
     7501 ctgaccacct acgccgacca cgatcgggtc cgctactacc tcgacttctt ccagggcccg
     7561 gcccgatccc ggatggcggt ctggctccag cgcatgccgg tctatgagac aatggtgcgg
     7621 gagcggtttc aagcggccgg gttgccgtcg gatctggtgt atctcggcct gatcgagtcg
     7681 ggtttctcga acgtcgccac gagccgttct cgcgccgtgg ggatgtggca gttcatgcgc
     7741 ggcaccggac gctggatggg cctgcgagtc gaccggtggg tagacgagcg gcgtgatccg
     7801 gtgaaggcca ccgacgccgc ggcccggtac ctgtctatgc tcacgcagca gttcggcggg
     7861 tcctatttcc tggctgcagc agcgtacaat gccgggccgg gccgggtgtc ccgcggtctg
     7921 tcccggctgg gcacatcggc tccggggggg tcggacgaat ccgacgaaga tgaggaagaa
     7981 gaagatggcc tccgcgatga gcactttttt tcgctggccg actcgcgcta catccgaaga
     8041 gagaccaagg actacgtccc aaagctgatc gccgcctcgc tgatcgggcg caatccgtcg
     8101 gcctttgggt tcccgccgcc cgccgcgatg gacctgttcc cgcgggattc gctggtagtg
     8161 cgggagatga ccggtctgga tgtcgtcgcc aagctggccg gggtgccgcc tgcgaccatt
     8221 cgggagctca acccgcacta tttgcggcgg gccactcccc cgcgctccac cagcgtggtc
     8281 cggctccccg cgggaaccca ggagcgggtc ggcgaggcct acgcggcgct cccggccaag
     8341 gagcgcgccg gggcatcggc cgccagcctg agggatgtcg acgcggccga aaccagcacc
     8401 cggatccacc gggtgcggtc gggggagacc ctgggcagca tcgcgcagcg ctaccgggtg
     8461 tcggtgtcca gcctccgcaa actgaaccgg ctcggcaagt cgaacctgat ccgggtcggt
     8521 cagcgcctga aggtctccgg ggggacggtg gcggcctcga gccggacggc ttcgcgtccc
     8581 gaggtgcatg tggtcaggcg gggggaaacc ttgtcggccc tggcccgacg ttacggcgtg
     8641 tcggtccagg ccctcatgtc ggccaacgaa atgtcatcca gccggctgcg ggcgggccag
     8701 aaactgcgga tcccgaccta acaaaaccag gagacaggag agaggagaga ggaaaccatg
     8761 cttcctctct cctctctctc ctgttctagt ccgaggcccc gcgccggagg acagccggtg
     8821 ctgctttcac ctcgccgcgc actccggtca acaccagctt ggcgtagccg ttcctcgggt
     8881 caccgcccga cgccgagatc gaatccacca gcgtcggtcc ccggttgtac gccaccagtg
     8941 ccagcgtgag atcaccatcg aagcggcgca gtaggtcccg caggtaacgg aatccgagtc
     9001 gcagattggt atcgcggtgg tgcaggtcct tcacggtggc ctcgggcaga tacccgcgcg
     9061 cggtggccag cctgacctga gtgtacccca gggcgcccgc gtcgctctcg gcggcgcggc
     9121 ggaagttgct ctcgaccttc accagctggt acgccagctc gggggaaatg ccctcctccg
     9181 cggcgacatc gtaaatggcg gcactcaaat cggtggcgat cccgaacttg ttggcgttcg
     9241 acaataccgt cgtggcccgc tcgaggagga gacgggtggc ggtcaggtct ccgcggggtc
     9301 cccggtcctc gttgaccgca ctcagtgtgg ctggcgcaag cggcgcggcg ggcgctggcg
     9361 ggccgctcac caactggccg ctcagcgcga tggccgcgcc gactagaacc gacgccacgg
     9421 ccagcaggct cagctcggtg aggatgatcc tcacccagcc cggccggcct ccctgtggtg
     9481 tcaagtcagc gtgcagcact gatgctcctt ggtttagtca tcacccggcg gtttagtcat
     9541 cacccggcgc ggtccaatcg ccccgagtac cgccggtctt gcttatcaga cgaatggcct
     9601 cgatccgcat cccacgatcg acggccttca ccatgtcata caccgtcaaa cacgcggccg
     9661 ctaccgcagc catcgcctcc atttccactc cggttcgggc ggtcgctttc gcccgggccg
     9721 atatccggac accgggcagc tccgcatccg cctccgcggt cacctccacg acatccagcg
     9781 cgatcgggtg gcagagcgga accagatccg ccgttcgctt tgcccccgcg atccccgcca
     9841 atcgagccac cgccaggaca tcacccttgg ccaccgcgtt gtccctcacc agggcgaagg
     9901 cctcggcaga catccgaacc tgaccctggg cggcggcttc gcgcaggctg accggtttgt
     9961 cgccgacatc caccatccgc gccgcgcccc gttcgtcggt atgagtcagg cgcatagcgc
    10021 ttcctccagc tccagggcca gcgtaaccag caccaactgg gggttcacgt tcccctgggc
    10081 ggcctcgcgc gccacttgca ccttctccgc cgccagcacc agcccgctca actcgcgtcc
    10141 cttgagggcc cgggggacag cccgacgggg cacctcgccg gctcgttctc gagcggcgtc
    10201 gcccaggagg gccgacagcg cgtcgagcat ggcggcgaaa tctcctcgcg cctgatacgg
    10261 aggctgccgc agggcgcgtt cgtaactctg tttccctccg gccagcgcgg cttccaccag
    10321 tccagcggcc gcttcccggt accgggcgac cgatccgtct tcagccaggg cggcgccgat
    10381 ggatccttcg gcggcggcga cccgctcatt caaccccgct ggcgacagct tcggctgcag
    10441 gtacgagccg aggaagcctc gcacctcttc gtcagagaga cggcccagcc tcaacatcac
    10501 cgcacgcgac cgtatggtcg ggagcaggcg ccggggatca ccggccgtca gcagcaccac
    10561 cgtgtcggcg ggcggctcct ccagcgcctt gaggagcgca ttggccgcat cctcggcccc
    10621 ggcctgggca ataaggcgtt ccgcgtcccc cacgatgaac accttccgag tcgcctcgac
    10681 cggcgtgaga ctgacccgct tcaagagcag tcgcgcgctc gggatcccat ggctccacat
    10741 cccgtcgggc tcgccccaga gaggtcgctg gcgccgctcc tccaacactt ccgccagcgc
    10801 ctccgcggcc tcctccacct gcttgtcggg ctcccctgcc ttgggccgct ggatcggcac
    10861 gaaccagtgt acgtccgggt ggaccaatcc cagcaccttc cgacagggga ggcattcgcc
    10921 gcagggctcc gggcttcccg gccgggtaca aaccaggcgc tgggcaatcc atagggcgaa
    10981 ccgttgcttc cccaccccat ccggtccggc gatcaacagg gtctggggta ttgtccccga
    11041 ctgaatcgcc cggctgacgt gttctcgtgc cgctgcatgc ccgaccaaag ggagaatggc
    11101 catgcgagca agctagtgag catcatgcaa gttgggaacc ggatggcgat gtaacatctt
    11161 tttccacaac aacttatagt ggcagaatgc gacactgcca tggcggtaaa gcggcaggag
    11221 ccggaacgat acagtcacca aaaagttgcg agcgctcgct catttttaga taaaagcgag
    11281 caaacgctcg catgatcagc taatggattg gagccgggtg tgttatgaat gtgagcgaaa
    11341 tcactgcgcg aaccggtata gtcactccga ttcttctgat tgatgctcgc attccatatt
    11401 ctgtacaagg ccccgacctg ctcggattcg gtcaccttgg gactggccga tattcgtttt
    11461 cggacactac ggcgtgcgaa aaagttttcg gcgatgcgcc tgcccaacaa ggtgcctcgc
    11521 cagcccgcca ccctaccgat tccagggctc ctggggcacg gtcgagtcga cgctgttccg
    11581 gagagcgtcc ataaatcggg cagcgcgatc gatggttgga ccgggggagc gcgggccccg
    11641 cgcctcggga tcgccgctga cttcgagctc ggtaaaggtg ggccccgggg tgttgagcac
    11701 tgtctccagg ccggccgtcc agtgctctcg actggaaaag cggaacaacg agttgaagcc
    11761 ggtcgcccgc gccaagccca ggaaatcgac ccgatcgtcc gcggctcgtc ccccgggcga
    11821 cgccggggtc ggctgggagc cggtgacctc atacactccg ttgtcgcaca ccaggacgat
    11881 gaggttgggg ggtcgttcgg ccgtgatcgt caccagcgat cccaggttca tcaacaggga
    11941 gccgtccccg ttcacgacga tgacgcggcg gtcggggcgc gagagcgcga gccccagccc
    12001 cagtgaagtc gcgtgaccca tcgcggacgg gacgaacacg aagtcgagcg gatgggtggg
    12061 gcccagggcc atccactccc gggccggtcc catggtggtg atcacgacat cactcgggcg
    12121 ccgagccgca cggagcggct ccagcgcgtc gcgcagggac atgcgagatc ggttggagct
    12181 cacgcgcgtc cttcggccag gaggaccgcc cccgcagtgc cggccacgcg gcaggcctgg
    12241 agatgcccca gcacggactc ggcgtcgggt tgggtgatca accggtaatc gatgttccag
    12301 gccttcagga tcggctcggt gaataccagg caggtatcac cggggagcgc ctcctgattg
    12361 aagtagctcc ggtagccgat gaggctcagg atcgggagct tccagtcgtg cagcacgttc
    12421 cgcagcgcgt cacccgactc gaacaggccg gtgcattgga tcatcacgaa cggcgtcgct
    12481 cctcccaggt agaggccggc cgccacgctc caggcctctc cttcccggca cacccggacc
    12541 agccgcagcg tcccgctgcc aatgatcgct tcctcccacg ccccgatggt gctgtcgggc
    12601 agggtgacga cgtgggtgat tcccagctgg ttgagcagac tgacgatctg tcggccggtg
    12661 aacatgttct cgccagaatg ccctccgtcc ggggccgggt caagctcgga cggccaggtg
    12721 atcatccccg gttatcgttc tcggacgccg ggtcggtcaa cgggaatcgg agatgatatg
    12781 aacgacgacg ccttcaacct gagtgtccgc aggtttctca agcagttcgg tgtcagcgcc
    12841 cagcggcaga tcgagcgggc ggtggcagaa gcgctggaat caggaaagct gtcggggaag
    12901 gaaacgctcc gggccaccgc gcagctccgc ctggagggac tcgacgtcga cacgacgatc
    12961 gagggagaga tcacgctggg gtagcctagg gcaccagcag aaccccagcc tttccgccca
    13021 gatcgtcgtc ctcggcgggg atgccgggtg gaacccgcca gggaccaccg tcgacccgga
    13081 cattgacccg gtagatcccg ggcgcgaggg tgcgagagag ggtccaccat cccgggctgt
    13141 cggggagcat ggccaccggc tcccagtcgg taaagtcacc catcagctca acaccggccg
    13201 catgaggcgc gggcatcagc aaccgtacca tcggcccgcc ccgctctacc cggaacccgc
    13261 cgaacgccgc cgccgccggc cgcgcgggcg agtttacccg cggggcgaat accagccagc
    13321 gcagccccac ggtagtgt
//
LOCUS       DASWKS010000656         5651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_356582, whole genome shotgun sequence.
ACCESSION   DASWKS010000656 DASWKS010000000
VERSION     DASWKS010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356582"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..858
                     /locus_tag="VGA78_18725"
     CDS             64..858
                     /locus_tag="VGA78_18725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX9895973.1"
                     /translation="MGRVIAVANQKGGVGKTTTAVNLAASLAVAERKTLLIDADPQGN
                     ATSGAGAKRDPGLPTLYDVMLNGAAIDSVIQPDTDLPYLSVLPANQELVGAEIELVAR
                     EGRERVLREVLAPIRDHFDVILVDCPPSLGLITLNVLTASDAVLIPIQCEYYALEGIS
                     QLINTIRLVQQNFNPDLAIDGVLLTMYDARLNLCRQVATDAREYFGDKVLKSVIPRNV
                     RLAEAPSFGKPVLLYDVQSVGAKSYLSAAQELMKRVDSVTTGGRND"
     gene            851..1741
                     /locus_tag="VGA78_18730"
     CDS             851..1741
                     /locus_tag="VGA78_18730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEX9895974.1"
                     /translation="MTEVKRLGRGLEALLGPISRQQAAESGVLRELPVSSIRPNPFQP
                     RREFDEEGLEDLAQSIKASGLLQPIVVRAHAGAWELVAGERRWRAVQKLGWAKVPAVV
                     KEVDDQSLLTLALIENLQRDDLSPMDEARGYDRLMREFALPQAEVARLVGRNRATIAN
                     SLRLLTLPPEVQQMLERRELSEGHGRALLALNDQAEIGRIAREVAENGWSVRTTEALT
                     RGEGPAAATVRPRLRRVKAPVRTLHAEQRRVEDTLRRRLGTDVRVTAKRKGRGLITIS
                     YYSNDDLARVIELILGQPYE"
     gene            1738..2742
                     /locus_tag="VGA78_18735"
     CDS             1738..2742
                     /locus_tag="VGA78_18735"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEX9895975.1"
                     /translation="MNLRLLLLFLIVASGCGPREAVTPSLRVALITPGSIADASWNSG
                     AYAGLIQIRDSLGLQVSHVEARTPGEQEEQMRTYAAQGYGLIFGHGFEFQDGAERVAR
                     EYPNPVFVITSGQRLAGNVVPLIFRLSDATYLAGMVAGSLTRTNKIGYVGGIELPPVK
                     LAYDAWAAGAKAANPRVQSRETYLNNFDDAVAGREAALAMIRLGADMLHHNADQAGLG
                     VFQAAKENPGVFVFGSNSDQAHLAPDRVIGSAVIDLPRAFLLIAREVQEGRFTPRVES
                     FGLQSQVIRYSPNPALDSLVPAALKAKLKAAEDSIIAGTLVPVDRSTGRMADSGPGRE
                     "
     gene            2764..3552
                     /locus_tag="VGA78_18740"
     CDS             2764..3552
                     /locus_tag="VGA78_18740"
                     /inference="COORDINATES: protein motif:HMM:NF013909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEX9895976.1"
                     /translation="MPIDEGASLGDLTAYLDSYLRIREVPDHPNAFNGLQVENSGAIG
                     WIATAVDASQATIDGVVERVRSAGQGSALLIVHHGLFWDGPAPVTGRRFRRVKRLLDH
                     DVALYGAHIPLDVHPEVGNNAVLARDLGLSELAWFSDYRGIPLGVAGNLSLPRDQLVT
                     RLDQMLSTRARLVAGGPEVTRRVGIITGAAGDRIRSAADAGCDTFLTGEGMHHTYFDA
                     MEFGVNAIYAGHYATEQVGVKALGLHLSGRFGIPWEFHDHPTGF"
     gene            3815..5260
                     /locus_tag="VGA78_18745"
     CDS             3815..5260
                     /locus_tag="VGA78_18745"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX9895977.1"
                     /translation="MSPPPSLSLERISKHFGPVRALHQVDFSLESGTVHALLGENGAG
                     KSTLMHVAYGLIPADSGEIRIGGRPVRMSSPRVARAHGIGMVHQHFTSVPALTVAENI
                     QLAGGRAGARLPAFAGFITGLELDARVEELSVGRKQQLEIVKALATDAKILLLDEPTA
                     VLAPSEIEQLIDAIRAFASDGGSVVLITHKLDEALRAADFVTVLRQGVVTLYSAITGQ
                     TKETLAEAMIGEGLSQPVLRSNDSGLSGSAAYAVALEGVSVAPIEGRGPGLREASFSL
                     LPGELVGVAAIEGNGQRELMLVVAGLLQPTSGSIKVAGPVALVPEDRTTEGLIPDFSL
                     AENVALGLGDRGAWVRGPWIDWAEARRQTADLMAGFDVRAPGPDVAALALSGGNQQKL
                     VLARALDQHPRVLVAENPTRGLDIRASAAVHARLRQAAADGIAVLVYSSDLDEVLELA
                     QRVVVVAGGRVVHPNPPLDRAVVGKAMLGLG"
BASE COUNT          979 a         1775 c         1949 g          948 t
ORIGIN      
        1 tgtaatccgt gtaatccgtg taatccgtgg cttaagtttg agcgtccaac aaagcaggag
       61 cggatgggtc gagtcattgc ggtcgccaat cagaagggcg gcgtggggaa gaccacgacg
      121 gccgtcaatc ttgccgcatc gctggcggtg gccgagcgga agaccctgct gatcgacgcc
      181 gatccacagg ggaacgcgac cagtggtgcc ggcgccaaac gggacccggg gctcccaacg
      241 ctgtatgacg tcatgctcaa tggcgccgcc atcgactcgg tgatccaacc cgacaccgat
      301 cttccttacc tcagcgtgct gcccgcgaac caggagttgg ttggcgccga gatcgagttg
      361 gtggcccggg agggaaggga gcgggtgctg cgcgaggtgc tggcgccgat tcgcgatcac
      421 ttcgatgtga tactggtcga ctgcccgcct tcgctcggac tcatcaccct caacgtgctc
      481 accgcatccg acgccgtgct gatcccgatc cagtgcgagt actacgcgct ggaagggatt
      541 tcccagctca tcaataccat ccggctggta cagcagaact tcaatcctga cctcgccatc
      601 gacggcgtat tgctcaccat gtacgatgcc cggctcaacc tctgccgcca ggtggccacc
      661 gacgcgcggg aatacttcgg ggacaaggtc ttgaagtcgg tgattccacg gaacgttagg
      721 ctggcggagg cgcccagctt cggcaaaccg gtgctgctct acgatgtgca atcggtagga
      781 gccaagagct acctctccgc cgcccaggag ctgatgaaac gggtcgattc cgtcaccaca
      841 ggaggccgca atgactgaag tgaagcgcct cggccgggga ctcgaggccc tgctggggcc
      901 gatctcgcgg caacaggcgg ctgaatcggg ggtgttgcgg gaattgccgg tgagctccat
      961 tcgtcccaat ccgttccagc cccggcgtga gttcgacgag gaaggcctgg aggatctggc
     1021 gcaatccatc aaggcatcgg ggctgctcca gccgatcgtg gtccgggccc acgccggcgc
     1081 ctgggagctg gtggcgggcg agcggcgctg gagagcggtc cagaagctgg gatgggccaa
     1141 agtgccggcc gtggtgaagg aggtcgacga ccaatcgctg ctcacgctgg cattgatcga
     1201 gaacctccag cgggacgatc tgtcccccat ggacgaggcc cggggctacg accggttgat
     1261 gcgcgaattc gcattgccgc aggccgaggt ggctcggctg gtgggccgga accgggcgac
     1321 catcgccaac tcgctgcggc tgctgaccct gccgcccgaa gtgcagcaga tgctggagcg
     1381 ccgcgagctg agcgagggcc atggccgggc cctgctggcc ctgaacgacc aggccgagat
     1441 cggccggatc gcgcgcgaag tggcggagaa cggctggtcg gtccgcacca cggaggctct
     1501 cactcggggc gaaggaccgg cggccgcgac cgtgcgtccc aggctgcgcc gggtgaaggc
     1561 gccggtgcgg accctgcacg ccgagcaacg gcgggtcgag gacacactgc ggcggcgtct
     1621 gggcaccgat gtgagggtca cggcgaagcg gaaggggcgc gggctcatca ccatcagcta
     1681 ttactcgaac gatgatctgg cgcgcgtgat cgagctgatc ctgggccagc catacgaatg
     1741 aacctgagac tcctccttct cttcctgatc gtcgcgagcg gatgcggtcc gcgtgaagcg
     1801 gtgaccccat cgctccgggt ggccctgata acccccggct cgattgccga cgcgtcgtgg
     1861 aactcgggtg cgtacgccgg gctgatacag atccgtgact cgctcgggct ccaggtgagt
     1921 cacgtcgagg cgcggacgcc gggcgagcag gaggagcaga tgcgaaccta cgccgcccag
     1981 ggctacggcc tcatcttcgg ccacgggttc gagttccagg atggggcgga gcgagtggcg
     2041 agggagtatc ccaacccggt cttcgtgatc acctcgggcc aacggctggc cgggaatgtg
     2101 gtcccgctga tattccgcct gtccgacgcc acctacctcg ccgggatggt cgcggggtcg
     2161 ctgacccgga ccaacaagat cgggtacgtc ggggggatcg agctgccacc ggtgaagctc
     2221 gcctacgatg cgtgggcggc cggcgccaag gcggcgaatc cccgagtgca gtcgcgcgag
     2281 acctacctca ataacttcga cgacgcggtc gccgggcggg aagcggccct tgcgatgatc
     2341 cgcctgggcg ccgatatgct gcaccacaac gccgaccagg cggggttggg cgtctttcag
     2401 gcggcgaagg aaaacccggg tgtgtttgtg ttcggctcca attcggacca ggctcacctg
     2461 gcgcccgatc gggtgatcgg ctccgccgtg atcgatctcc ctcgcgcctt tctgctgatc
     2521 gcgcgggaag tgcaggaggg ccggttcacg ccgcgggtgg agtcgttcgg gctgcagagt
     2581 caggtgatcc gctacagccc caatcccgcg ctcgacagcc tggtcccggc cgcgctcaag
     2641 gcaaagctca aggcggccga ggactccatt atcgccggca cgttggtacc ggtcgaccgc
     2701 tccacaggga ggatggcgga ttcaggcccg gggcgggaat gaatgcagaa tgccgagtgc
     2761 ccaatgccga ttgatgaggg ggcttccttg ggtgacctca ccgcctacct cgattcctac
     2821 cttcggatcc gggaggtgcc ggatcatccc aatgcattca acgggctgca ggtcgagaac
     2881 tcgggggcca taggctggat cgcgacggcg gttgatgcca gccaggcgac catcgatgga
     2941 gtagtcgagc gggtccgaag tgcgggacaa ggctcagcgc ttctcatcgt ccatcacggg
     3001 ctgttctggg acgggcccgc gccggtcacc gggcggcgct tccggcgagt gaagcgcctg
     3061 ctggaccacg acgtggctct ctacggtgcc cacattccgc tggacgttca cccggaggtc
     3121 ggcaacaacg cggtgttggc ccgcgatctc gggctgagcg aactcgcctg gttcagcgac
     3181 taccgcggga tcccgttggg cgtcgccggc aatctctccc tcccacgcga ccagctggtg
     3241 actcggctcg accagatgct ctcgacccgg gcccggctgg tcgccggcgg accggaggtg
     3301 acccgacggg tcgggatcat caccggcgcg gccggggacc ggatccgctc cgccgcggac
     3361 gccgggtgcg acacctttct gaccggcgag gggatgcacc acacctactt cgacgcgatg
     3421 gagtttggag tgaacgcgat ctacgcggga cactatgcga ctgagcaagt aggggtcaaa
     3481 gcgttaggcc tccatctgtc ggggcgcttc gggattccct gggagtttca cgatcatccg
     3541 acggggttct gaacgacctg gttccgggta ccatgttcca tcgttccggg tacggtgctg
     3601 agtgcggaat tggatggtaa gagataagag gtgggaaggg ggagtgaact ggagagtgcc
     3661 caatgcccaa tgcccatagc agaaggaact gcgccttgtt tctccctctg caatcggcat
     3721 tgggcactga gcattctcca gttcactccc ccctcggtga ctggcacctc gcccagcacc
     3781 gcacgtaggc accaggaacg aggaaccagg aactgtgtcc ccgcccccct ccctttccct
     3841 ggaacgcatc tccaaacatt tcggccccgt tcgcgccctt caccaggtcg acttctccct
     3901 cgagtccggt accgtccatg cgctcctggg cgagaatggc gccggcaagt ccactctcat
     3961 gcacgtcgca tacgggctga tcccggcgga ctcgggtgag atccggatcg gcggacggcc
     4021 ggtcaggatg tcctcccccc gcgtggcgcg ggcccacggg atcgggatgg tccaccagca
     4081 cttcacctcg gttcccgccc tgaccgtggc cgagaacatt cagctggcgg gcggacgagc
     4141 cggcgcgcgg ctgccggctt tcgccggctt tatcaccggg ctcgagctcg acgcgcgggt
     4201 cgaggagctg tccgtcggcc gcaaacagca gctcgagatc gtcaaggcgc tcgccaccga
     4261 cgcgaagatc cttctgctgg acgagcccac cgcggtgctg gcgcccagcg aaatcgagca
     4321 gctgatcgat gccatccggg ccttcgccag cgatggcggg tcggtggtgc tgatcaccca
     4381 caagctggat gaagcgctgc gggccgccga tttcgtgaca gtgctgcggc agggggttgt
     4441 cacgctctat tcggccatta ccgggcagac gaaggaaacg ctggcagagg caatgatcgg
     4501 agaaggactg agtcaaccgg tgcttcggtc taacgactca ggactaagtg gttctgctgc
     4561 ctatgccgtg gcgctcgaag gggtttcggt agctccgatc gagggacggg ggccggggct
     4621 gcgagaggct tcgttttctc tgttgcccgg cgagctggtg ggggttgcgg cgatcgaagg
     4681 gaacgggcag cgggagctga tgctggtggt ggcggggctg ctgcagccga cctcgggcag
     4741 catcaaagtc gcggggccgg tggcgctggt tcctgaggac cgcaccacgg aagggctgat
     4801 ccccgacttc tcactcgccg aaaacgtcgc cctcgggctg ggcgatcggg gcgcctgggt
     4861 gagagggccg tggatcgatt gggccgaggc tcgccgccag acggccgacc tgatggccgg
     4921 cttcgacgtg cgcgcgcccg gcccggatgt ggcggccctg gcgctgagcg gcgggaatca
     4981 acagaagctg gtactggccc gcgcgctgga tcagcatccg cgggtgctgg tggcggagaa
     5041 ccccacccgc gggctcgaca tccgggcctc cgccgcggtg cacgcccgtt tgcggcaggc
     5101 ggccgccgac ggcatcgcgg tgctggtcta ctccagcgat ctggacgaag tactcgagct
     5161 ggcccagcgg gtggtcgtgg tcgccggcgg gagggtggtg catcctaatc cacccctgga
     5221 ccgagcagtg gtgggcaagg cgatgctcgg attaggatga gcgggacgat ggcggtgaca
     5281 aattgtcggc cgaaaccgcg tgtgcggcct catacaacac atctggatcg aggtccgccc
     5341 cattcggcca gacgagcgtg ccggcatccc gatcgaccgt cactcgagcg aagaaactgg
     5401 gatcctggag tgctgcaaac acacctcgac gaccgacaat ccaaggggcc aggtccacag
     5461 ttccgacgaa gccatcgctg aaatgaaggc gcacctggaa gcggtcgcat acgtcaacgc
     5521 gagttattcg gggatacaac ggcatagggc tactccagcg gcgcgatccg catcgggggc
     5581 tcgtcatcgt ggagccggcg ccaattctcc tccaactcgg cttgatgcag tgtagcccag
     5641 tccaccacga g
//
LOCUS       DASWKS010000657        11496 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_356925, whole genome shotgun sequence.
ACCESSION   DASWKS010000657 DASWKS010000000
VERSION     DASWKS010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356925"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1309
                     /locus_tag="VGA78_18750"
     CDS             <1..1309
                     /locus_tag="VGA78_18750"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX9895978.1"
                     /translation="VRPGDIRRQLPAEAPEQGEPFERIFADFERIIVPGLAHWQHPGW
                     FAYFASNASPPSILAEMLAAGVAVNCMSWATSPAATELEQVTLDWLRRLLGFPEAFSG
                     VIQDTASTATFTATIVGRDQAWRRAGRDARLVFYASEEAHSSVWKAARLAGFGESDVR
                     RIATDAAFAMQPDALAAALEADQAQGRVPAVVVATIGSTSSTAIDPVPVIGRLTRTHG
                     SFLHVDAAWAGSAALLPECRHYFAGLELADSVVVNPHKWLGVHFDCTAHYVRDPGLLQ
                     QSFALTPEYLRSVHDAEVVNYRDWGIPLGRRFRALKLWMVLRNSGAEALRAMIRQHLR
                     WGESFGSWVDADPEFERMAPVSFALVCFRHRPAGLDEAELDQHNRRLLALINASGRVH
                     LIGTSLRGRFVIRMAIGQRSTEERHVREAWDIIRASANRTGEG"
     gene            complement(1481..3286)
                     /locus_tag="VGA78_18755"
     CDS             complement(1481..3286)
                     /locus_tag="VGA78_18755"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX9895979.1"
                     /translation="MPPAFRRILVPVRDALRDGRRTVLLVVAVGGTGFGLLAPIDRLT
                     EGPVNRLLLPAIADAGAIIGWTASARSPAATQARAVGDLLTALLVLAWAAMAIAAVTI
                     LTHYIARASRRGADIGVRRAVGASRRDVFLALLVEAGVTAAAAVLLGVLLAVAAHLTG
                     AGAWPGTIASVNPWPVVVTLALVAAIGLGSFLSLGFAAPENLLHPDEGQVNLQIPAVQ
                     LGCSLAMVLSSALLLDRGTAKSEPAAGPGPAGVIVQLDSGLTEPSIRSERFGVLLSRL
                     EREVDHSRVSLTGAGDRLGLGTQDIVTTDCGRCYRSGVFLRYLHVNAVHRFVSPDSFE
                     AGGMRLVNGRGFTSQDGWNSPRVAVVNRHLALRHFQQGQAIGRDLYLGTGWPRSPYRV
                     VGIVDDRPAQVLGGAFQPFEMVYLSVLQLPPPAVELLVRGRERDVSTDAVLEIARQSL
                     GGQVRPLQVTREGDYLAAQLSSIRWFGVWFGAAGVVVLLAGVAGTFGIVAMWVRSLAH
                     ELAVRRALGASRRRIMGFVLGRAAGIGVGGIGVGLFLFFVVFRETLSGQLSNLPAWQP
                     RVFIGTALLLLGVALGAALLPAWRMTHRQPSTFLH"
     gene            complement(3302..4228)
                     /locus_tag="VGA78_18760"
     CDS             complement(3302..4228)
                     /locus_tag="VGA78_18760"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX9895980.1"
                     /translation="MTHRRAVLLLVLTTVIWGVSITAVKALMLHVTPMLAVAVRFGLA
                     GVLLLPLLGGLTRQEVRAGLWIGLLFAAGVAFQNLGLAITTPSRNAFIVSLSALLTPA
                     VGALALAHRVPVPLVIRILIAMGGVFVLTSPEGTLSAINRGDLLTLVSAILYAGQIVA
                     VGHFARSVSAPRLLCLQFLLTAATGLMLAPVLETPRLEAGLTTWLLVAALATSSLLTF
                     GFQLRSQRVVTASEAALIFTFEPVVTAVTSYLVFGEVLTPIQWMGAAAIMLSVGWPAR
                     GTKQEVGSREQGAGRRGTDSEVASPLPPPASP"
     gene            complement(4225..7047)
                     /gene="uvrA"
                     /locus_tag="VGA78_18765"
     CDS             complement(4225..7047)
                     /gene="uvrA"
                     /locus_tag="VGA78_18765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX9895981.1"
                     /translation="MSSSRVIRIVNARQHNLKGITVELPHRQLVVITGPSGSGKSSLA
                     FDTLYAEGQRRYIESLSTYAKQFLERMPKPAVDLLEGLAPAVAIEQRNPVVSSRSTVG
                     TATEVYDYLRLLWARIGRPFCRRCGAPVRRDTPASVVSAVTGGRTDGPTDRPTSRIQV
                     AFPVPASARATHEALVENLRALGFVRVVADDEPLRLDELPAGLDLAARKEILVVVDRL
                     VVEPGVEDRLAEAARTAFAEGEGVTVILHDGGRLRFTEFLACSACDTPVGAITPSLFS
                     FNNPRGACGGCNGFGAVLEYDESLIVPDASKSLAEGAIDPWTKPRYETRRRMLLEAAR
                     KLDADPNAPWRSLKPAVRRELLHGAVGRYSGIFPFLRGLEEKRYKQYIRVFLRQYQRA
                     TVCPECHGTRLNPHALAVRLYGKTIAQAASLSVEELHRWLTCLPLNDTERQIGSLVLS
                     QLTDRSRYLLDVGLGYLSLERQTRTLSGGEAQRIALSNALGARLMDALYVLDEPTIGL
                     HPRDTDRLLALLRRLRDIGNTVVVVEHDPAAIRQADFMLELGPGAGERGGQVVHAGRP
                     EDAGETLTGQYLSGRRRIGVPSLRRPSGPLWLTVRGARLHNLAGVDVKLPLGTFTAVT
                     GVSGSGKSTLVHDIIYRNLEAKLHGAHSAKSHLGEAVGTVEQLSGWERISDVVLIDQS
                     PIGRSPRSNPVTYVKAFDEIRELFAAHPLSRTRGYTPATFSFNLEGGRCETCEGAGHV
                     QVEMVFLADVFVPCETCEGKRFKREVLDVKVSGHSITDVLQWTVDEAIARFRHQPKLG
                     AALWHLQQVGLGYLRLGQPATTLSGGEAQRLKIARELIQAGKKAGRKLYLLDEPTTGL
                     HLEDVRVLIAVLDRLVDAGNTVVVIEHHLDVIKRADWVVDLGPEAGPAGGTVVAMGPP
                     EVIAAAPESHTGRYLLGLLNDVPAGV"
     gene            7105..8172
                     /locus_tag="VGA78_18770"
     CDS             7105..8172
                     /locus_tag="VGA78_18770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase-like domain-containing protein"
                     /protein_id="HEX9895982.1"
                     /translation="MSTIITPRVLRRGLEFSLLASLLGFAAVLFYRGNYRDFVSSLGR
                     LQPLWLLVGLAVSSMDWIGGGLRHWVISRHVWPGSSLKSMIVAGGMGAWAGYLTPVHA
                     GASPMMVYTMRRYGVPIPVGLTTILMSFVTTVIFFAVAGPLAVFLGAGRSLGEKGAVL
                     GLSLYDLFVGSLAVFGSLGMLMLFLILFPGVARDLTHRLATVLGRRSNRVAAKLEQFR
                     AGIDEAHASLVSFLCFRGLIALLIGVLLTGLAYAPRLLSGYVVLRAIGIEAHFIDVLL
                     LQTLITFLLYFAPTPGASGIGEILSALVMQVYVPKELVALYALLWRLFVTYATVITGS
                     VVFYGWVRRGLRHLEGDPVAA"
     gene            8317..8796
                     /locus_tag="VGA78_18775"
     CDS             8317..8796
                     /locus_tag="VGA78_18775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEX9895983.1"
                     /translation="MELEYGGRRYSVAGGELTLGADPGATVVLAGTRAHHAVVRALGE
                     RMATIRAAEAGAEISVNGVALGPDPTPLLDGDTILIGTHQLKVVNPSHPPGGPGAPPP
                     GARERLHDTLFGLPRSTPVPGTPAAPPPPKPQAIGGRLWIVVAAVVSLALLGWLLLR"
     gene            8799..9569
                     /locus_tag="VGA78_18780"
     CDS             8799..9569
                     /locus_tag="VGA78_18780"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEX9895984.1"
                     /translation="MHVTCAAGTDKGVVRSANEDYHLMLLERGIFIVADGMGGHAAGE
                     VASEMAVRIIADELGSFRGLPDADVASRLFKAIQSANGAIFRRTLVEHDKRGMGTTAT
                     AMVLFPRRYLIAQVGDSRAYILREGKLFQITKDHSYVQEQVDAGLLTSDQARTHPYGN
                     VITRCVGSNEEVVPDLYFGNLQSGDVILLASDGLTGMLEDDQLARIMKADSDPTQWVD
                     TMISDANRRGGLDNITVIIVRVDSVDPAPAGNGPRSGR"
     gene            complement(9566..10405)
                     /locus_tag="VGA78_18785"
     CDS             complement(9566..10405)
                     /locus_tag="VGA78_18785"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEX9895985.1"
                     /translation="MIPAGSVLTLTLAAAWFAPGLAAQARVRNPHVTISLVPERTAAL
                     PGASLRAGLRFRLENGWHIYWRNPGEAGIATHPVWRLPAGWKVDPLSWPVPERYDVAG
                     STTHIHRGDVVFGTRFHVPATGLGTARIAVELSYGICRDVCVPGKAELGIAIPVGREG
                     MVPDEWPRVAFLWTARAPRQGGPAVEASLQDSVVLVRLRGSPGAALTAGTWTFFPADR
                     SVAPAAMTAQARPGSRELVLRLPLAQCTPIRLNGILVQGDPTVPYPKGYVVSAPLTAR
                     PTC"
     gene            complement(10434..>11496)
                     /locus_tag="VGA78_18790"
     CDS             complement(10434..>11496)
                     /locus_tag="VGA78_18790"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX9895986.1"
                     /translation="TRALAALSTEPANHGGLDPADCRAVTLAALLHDIGHYPFSHALE
                     EAGFPSHEALGTAKLRDGELGQELRDAGGEALVEEIGLLIRGRSASPLKGLISGTLDL
                     DKIDYLSRDARMCGVPYGTVDVDRLLASLTIVTCDGVDQVGIHEKGVSALESLLFAKY
                     QMYRNVYWHHAVRSATCMFKRAVRDAVRGGTVSVGVIAELTDDAFMQRLIEQDRSRLA
                     LAVRDRRLFKRALDLPASDVPGAQEWVTDDTDLLELVENALARSAGLEPGELLLDFPA
                     RRNMLAVDLPLRLRDHRVERLTSEGRAGHLGLPRIAEELYRSAQRLRVFVARPVNLAV
                     DQITSLVSSPAPEVRARFG"
BASE COUNT         1908 a         3892 c         3873 g         1823 t
ORIGIN      
        1 tgtgaggccc ggcgacatcc ggcgccagct gccggccgaa gcgccggagc agggcgaacc
       61 gttcgagcgc atcttcgccg atttcgagcg aatcatcgtg cccgggctgg cgcattggca
      121 gcatccggga tggtttgcgt acttcgcgtc caacgccagc ccgccctcga tcctggccga
      181 gatgttggcg gcgggcgtgg cggtcaattg tatgtcctgg gcgacctcgc ctgcagccac
      241 cgagctggag caggtgaccc tcgactggct tcgccggctg ctggggtttc ccgaggcatt
      301 cagcggggtc attcaggata cggcatcgac cgcgaccttc accgccacca tcgtcggtcg
      361 cgaccaggcg tggcgccggg ccggccgcga cgccaggctg gtgttctacg cctcggaaga
      421 ggcccattcc tcggtctgga aagcggctcg tctcgccgga tttggggaga gcgatgtgcg
      481 ccggatcgcc accgacgccg ccttcgcgat gcagcccgac gccctcgcgg ccgccctgga
      541 ggccgatcag gcgcaggggc gggttcccgc cgtcgtggtt gccaccatcg gctccacctc
      601 gtcgaccgcg atcgatccgg tcccggtcat cggccggctg acccggaccc acggctcgtt
      661 cctgcacgtc gacgcggcgt gggccggatc ggccgcgctg ctgccagagt gccgtcacta
      721 cttcgccggg ctcgagctgg ccgacagcgt ggtggtgaat ccccacaagt ggctgggagt
      781 gcatttcgac tgcaccgcgc actacgtccg cgatccgggg ctgctgcagc agagcttcgc
      841 cctgactccg gagtacctca gaagcgttca cgacgcagaa gtggtgaact atcgcgactg
      901 gggcattcca ctgggccgcc ggttccgggc cctcaaattg tggatggtgc ttcggaacag
      961 cggcgccgag gcgttacggg ccatgatccg gcagcatctg cggtggggag aatcgttcgg
     1021 gtcgtgggtc gacgccgatc cggagttcga acggatggca ccggtcagct tcgccctggt
     1081 ctgtttccgg catcggccgg ccggcctgga tgaggccgag ttggaccagc acaaccgccg
     1141 gctgctggcg ctgatcaacg ccagtggacg ggttcacctg atcgggacgt ccttacgggg
     1201 acgcttcgtg atccggatgg cgatcggcca gcgcagcacc gaagagcggc atgtgcggga
     1261 ggcgtgggac atcatccggg catccgcaaa ccgcaccggg gagggctaat cactgatggc
     1321 tccaccaccg aaatccagga agtcggtttg gaacggatgc agcggacgag acggatgctg
     1381 cggatatgat ttggtcagta tcgatccgcc caatccgagt catccgccgg atccgttacc
     1441 accctgtatc ctggatcgtc gaaagcacat tggaatcctg ctagtgcaag aaggtcgagg
     1501 gctggcggtg ggtcattcgc caggccggga gcaacgcggc gcccaacgcc acacccagca
     1561 ataggagcgc cgttccgata aacactcgcg gctgccaggc gggcaggttg ctcagttggc
     1621 cggagagcgt ctcccggaag acgacgaaga agagaaacaa cccgacccca atcccgccga
     1681 ccccgattcc cgctgcccgg cccaggacga accccatgat ccggcgccgg gaggcaccca
     1741 gtgcccggcg caccgccagc tcatgagcca gagaacggac ccacattgcc acgatgccga
     1801 aggtgcccgc gactccggcc aggagcacga cgacgccggc cgcgccgaac cagaccccga
     1861 accagcgaat cgaactcaac tgggccgcga gatagtcccc ctcacgggtg acctggagcg
     1921 gccgaacctg gccacccagc gactgccggg cgatctccag taccgcgtcg gtcgacacgt
     1981 cccgctcgcg cccccgcacc agcagttcca ccgccggcgg gggcaactgc aagacgctca
     2041 gatagaccat ctcaaacggc tggaacgcac cgcccagtac ctgagcaggc cggtcgtcga
     2101 cgatgccgac gacccggtag ggggaccggg gccagccggt gcccaggtag aggtcccgcc
     2161 cgatcgcctg gccttgctga aagtgtcgca gcgccaggtg ccggttcacc accgccactc
     2221 gcgggctgtt ccacccatcc tgagacgtga acccgcgacc gttcaccagc cgcattccgc
     2281 cggcctcgaa cgaatccggg ctgacgaacc ggtgcaccgc gttgacgtgg agataccgca
     2341 gaaacactcc gctccgatag caccggccac aatcggtggt gacgatgtcc tgggtgccca
     2401 ggccgagccg gtcgcccgcg ccggtgaggc tgacccggct gtgatcgacc tctcgctcca
     2461 gccgcgacaa gagcacgccg aatcgctcgg agcggatcga cggttcggtg agtccggaat
     2521 cgagctgtac gatcaccccc gcggggcccg ggccggccgc cggttccgat ttcgccgtcc
     2581 cgcgatcgag caggagggcg ctggagagca ccatcgcgag cgagcaaccc aattggacgg
     2641 cgggaatctg gagattgacc tgtccctcat ccgggtggag caggttctcg ggagcagcaa
     2701 accccaggga caggaaactc cccagtccga tggccgccac cagcgccagc gtgacgacga
     2761 ccggccaggg attgacggag gcgatggtgc cgggccacgc cccggccccc gtcagatggg
     2821 ccgccactgc gaggagtact cccagcagca ccgcggcagc cgcggtgacc ccggcctcga
     2881 ccagcagcgc caggaacaca tcgcggcggg atgcaccgac cgcgcgccgg actccgatgt
     2941 cggctccccg gcgcgacgcc cgcgcgatgt agtgggtgag aatggtgacc gcggcgattg
     3001 ccatggcggc ccaggccaac accagcaggg cggtgaggag atcgcccacc gcgcgggcct
     3061 gggtcgctgc cggtgagcgg gccgacgccg tccaaccgat gatggcgccg gcatccgcga
     3121 tggcgggaag gagcagccgg ttgacgggcc cttccgtcaa ccggtcgatc ggcgccaaca
     3181 ggccgaatcc ggttccgccc accgccacca ccagcaacac ggtccgcctg ccatcccgca
     3241 acgcatcacg gaccggaacc agaatccgac ggaatgcagg gggcattcga ggctcctgtg
     3301 ctcaggggga ggcgggaggg gggagagggg aggcgacctc tgaatctgtc ccccgcctcc
     3361 ctgctccctg ctccctgctc cctacttcct gcttggttcc acgtgccggc catcccacgg
     3421 acaacatgat cgccgccgct cccatccact ggatcggggt caacacttcg ccgaacacca
     3481 ggtagctcgt gacggccgtc accaccggct caaaggtgaa gatgagggcc gcctcgctcg
     3541 ctgtcactac ccgctgggat cggagttgga atccgaaggt gagcagggaa gaggtggcca
     3601 gcgccgccac caggagccag gtcgtcagtc cggcttcaag tctcggcgtt tccagcacgg
     3661 gggcgagcat caggccggtg gccgcggtga gcagaaactg caggcagagc aggcgggggg
     3721 ccgagaccga ccgggcgaaa tgtcccaccg cgacgatctg cccggcatag agaatcgccg
     3781 agaccagggt gagcaggtcg ccccggttga tggcggagag ggtgccctcc ggcgacgtca
     3841 gcacaaagac gccgcccatg gcgatcagga tccggatcac cagcggcacc ggcacccgat
     3901 gtgccagcgc cagggcaccc accgcggggg tcagcagggc ggagagcgac acgatgaacg
     3961 cattccggct gggcgtcgtg atggcgagcc ccaggttctg aaacgccaca ccggccgcga
     4021 acaagaggcc gatccaaagc ccggcccgga cctcctgacg ggtgagtccg cccagcagcg
     4081 gcagcagcaa cacgccggcc aggccgaatc ggaccgccac ggccagcatg ggagtgacgt
     4141 gcagcatcag cgccttgacg gcggtgatgc ttactcccca gatgacggtg gtgaggacca
     4201 ggagcaggac cgcgcggcgg tgagtcacac ccccgccggc acgtcgttca gcagacccag
     4261 gagataccgg ccggtgtgcg attccggagc cgcggcgatg acctcgggcg gacccatggc
     4321 cacgaccgtg ccgccggcgg ggccggcctc cggacccagg tccactaccc agtcggcccg
     4381 cttgatcacg tcgagatggt gctcgatgac gaccacggtg ttgccggcgt cgaccagccg
     4441 atcgagcacc gcgatcagca ctcgcacgtc ctcgagatgc aggccggtgg tcggttcatc
     4501 cagcaggtac agtttccggc ccgctttctt gccggcctgg atcagctcgc gcgcgatctt
     4561 gagccgctgc gcctcaccac ccgacagggt ggtggccggc tggcccagac ggagataccc
     4621 caggccgacc tgctgcaagt gccacaacgc cgcgcccagc ttgggctggt gtcggaaccg
     4681 ggcgatggcc tcgtccacgg tccattgcag cacgtcggtg atggagtgcc cgctcacctt
     4741 cacatccagc acttcacgct tgaagcgctt gccttcgcag gtctcgcagg gcacgaacac
     4801 atcggccagg aagaccatct ccacctgcac gtggccggca ccctcgcaag tctcgcagcg
     4861 cccgccttcg aggttgaagg agaaggtggc cggggtatat ccccgggtgc gggagagcgg
     4921 gtgcgccgcg aacagctcgc ggatttcgtc gaacgctttg acgtaggtca ccggattgga
     4981 ccggggcgag cggccgatgg gcgactggtc gatcagcacc acatcggaga tgcgctccca
     5041 tccgctcaac tgctctaccg tgcccaccgc ttcgcccagg tgcgacttcg ccgagtgagc
     5101 cccgtgcagc ttcgcttcga ggtttcgata gatgatgtcg tgtaccaggg tgctcttgcc
     5161 ggaccccgac acgccggtca ccgccgtgaa ggtccccagg ggcagcttca cgtctactcc
     5221 ggccaggttg tgcagccggg cgccccggac cgtcagccac agagggccgc tcggccgccg
     5281 gagactgggc acgccgatcc ggcgccgtcc gctcaggtac tgaccggtca gggtctcgcc
     5341 cgcgtcttcc ggccggccgg cgtggaccac ctggccgccc cgttcgcccg ctcccgggcc
     5401 cagctccagc atgaagtcag cctgtcggat cgccgccggg tcgtgctcca ccacgaccac
     5461 cgtgttgccg atgtcgcgca ggcggcgcaa caaggcgagc agtcgatcgg tgtcgcgagg
     5521 gtgcaggccg atggtgggct catccagcac ataaagcgcg tccatcagac gggcacccag
     5581 ggcattggag agcgcgatcc gctgggcctc accgcccgag agggtccggg tctgccgctc
     5641 cagcgagaga taccccagcc cgacgtcgag cagataccgg ctccggtccg tcagctgcga
     5701 caacaccagc gaaccgattt gtcgttcggt gtcgttgagc ggcagacagg taagccagcg
     5761 atgcagctct tccaccgaga gcgaggccgc ctgcgcgatg gtcttcccgt acagccgcac
     5821 cgccagcgcg tgggggttga gccgggtgcc gtggcactcg ggacagaccg tggcccgctg
     5881 atactgccgg agaaacaccc ggatgtactg cttgtagcgc ttttcttcca gaccccgaag
     5941 aaaggggaag atgccgctat agcgtcccac ggccccatgc agcagctcgc gacgcaccgc
     6001 cggtttgagc gaacgccagg gcgcgttggg gtcggcgtcc agcttgcggg ccgcctcgag
     6061 cagcatgcgg cggcgggtct cgtagcgggg cttggtccag ggatcgatgg ccccctcggc
     6121 caggctcttc gaggcatcgg gcacgatgag cgactcatcg tactccagca ctgccccgaa
     6181 cccgttgcag ccgccacaag cgccccgagg attgttgaac gagaacagac tcggggtgat
     6241 ggccccaacc ggcgtgtcac aggcgctgca ggccaggaac tcggtgaagc gaagccggcc
     6301 gccgtcgtgc aggatcacgg tcacgccttc cccttcggca aacgcggtgc gggccgcctc
     6361 cgccagccgg tcctccacgc ccggctcgac caccagtcga tcgaccacca ccaggatttc
     6421 cttccgggcc gccagatcga gtcccgccgg gagctcgtca agccggagcg gctcatcgtc
     6481 ggctacgacg cgaacaaagc ccagggcccg cagattctcg accagcgcct cgtgggtcgc
     6541 ccgggccgat gccgggacgg gaaaggccac ttgaatcctg ctggtcggtc ggtccgtcgg
     6601 tccgtcggtc cgtccgcccg tcaccgcgga gacgaccgac gcgggcgtgt cgcgccgcac
     6661 cggagcgccg caccggcggc aaaacggacg gccgatacgg gcccagagca gtcgcagata
     6721 gtcatagacc tcggtcgctg ttccaacagt ggaacggctc gagacgaccg gattgcgctg
     6781 ctcgatcgcg accgcggggg ccagcccctc cagcaggtcc accgccggtt tgggcatccg
     6841 ttccagaaac tgcttggcgt aggtcgacaa cgattcgatg taccgacgct gcccctcggc
     6901 gtagagcgtg tcgaacgcga ggctgctctt ccccgagccg gacggcccgg tgatcaccac
     6961 cagctggcgg tgcggcagct cgaccgtgat gcccttgagg ttgtgctggc gggcgttgac
     7021 gatgcggatg acacgggacg acgacacggg ggaaggatat ctgattgacc gccccgccac
     7081 gaggccggta cacttagccc atcgatgtcc accatcatca cgccacgcgt gctccgccgg
     7141 gggctcgagt tctcactgct cgcgtcactg ctggggtttg cggcggtcct cttttaccgc
     7201 ggcaattatc gggatttcgt ctcgtccctg ggacggctcc agcccctctg gctgctggtg
     7261 gggctggcgg tgtcgtccat ggactggatc ggcggtgggc ttcgtcactg ggtgatttca
     7321 cgtcacgtct ggccgggctc ctcccttaag agcatgatcg tggctggtgg catgggggct
     7381 tgggccggct acctgacccc ggtgcatgcc ggggcgtcgc cgatgatggt gtacaccatg
     7441 cgtcgctacg gcgtgcccat cccggtgggt ctgaccacca ttctgatgtc gttcgtcacc
     7501 accgtgatct tctttgcggt cgcgggacca ctggctgtgt tcctgggggc ggggcgctcg
     7561 ctgggggaga agggcgccgt gctgggcctg tcgctgtatg acctgttcgt gggcagtctg
     7621 gccgtgttcg gcagcctggg tatgctgatg ctgttcctga ttctctttcc gggcgtggcg
     7681 cgggacctca ctcaccgtct ggcgacggtg ctgggccggc ggagcaaccg ggttgccgcc
     7741 aagctggagc agttccgcgc cgggatcgat gaggcgcacg ccagtctggt atcgtttctc
     7801 tgctttcgcg gtctgatcgc gctgctcatt ggtgtgttgc tcaccggcct ggcctacgcc
     7861 ccccgactgc tgtcgggtta tgtggtgctc cgggcgatcg ggatcgaggc ccatttcatc
     7921 gatgtcctgt tgctccagac gctcatcacc tttctgttgt atttcgcgcc cacgccgggc
     7981 gcatccggca tcggggaaat tctgagcgcg ctggtcatgc aggtctatgt ccccaaagag
     8041 ctggtggcgc tgtacgcgct gctgtggcgg ctgttcgtga cctatgccac ggtcatcacc
     8101 gggtcggtgg tgttctatgg ctgggttcgc cgggggctgc gtcacctgga gggggatccg
     8161 gtggcggcgt agccagtcgg tcggtcggtc agtcggtcag tcggtccgtg gcctgcccgc
     8221 cagtccgcct gcccgtccgc ccgccagttg cttgccagcg cctccctcgg cgcctacgtt
     8281 tttcgaccac tcctatcaaa cggttccggg cggtgcatgg agcttgaata cggtggccga
     8341 cgctattccg tcgccggcgg ggaattgacg ctgggggcgg accctggcgc cacggtggtt
     8401 ttggctggga ctcgggcaca ccacgcggtg gtccgcgccc tgggtgaacg gatggcgacc
     8461 attcgcgccg ccgaggcggg ggcggagatt tccgtgaacg gagtcgccct gggaccggat
     8521 ccgacaccct tgctggacgg tgacaccatc ctcattggaa cgcaccagct gaaagtcgtc
     8581 aatccgtccc atccacccgg cggccctggc gcgccaccgc ccggggcgcg tgagcggctc
     8641 cacgacacgt tgttcgggct gccgcggtcc actccagtgc cgggtacacc cgcggcgcct
     8701 cctcctccca agccccaggc aatcggtggg cggttgtgga tcgtggtggc cgcggtggtg
     8761 tcgctggctc tcctcggctg gttgctgctc cgttgaccat gcacgtcacc tgcgccgccg
     8821 ggaccgacaa gggagtcgtt cgcagcgcga acgaggacta ccatctgatg ctgctggaac
     8881 gcggcatctt catcgtcgcg gacgggatgg ggggacacgc ggccggcgag gtagccagtg
     8941 agatggcggt gcggatcatc gccgatgagc tggggagctt ccggggactg cccgatgccg
     9001 acgtggcctc ccggttgttc aaggcgatcc agtcggccaa cggggccatc ttccggcgca
     9061 cgctggtgga gcacgacaag cgaggcatgg gaacgaccgc cactgcgatg gtgctcttcc
     9121 cccgccgtta tctcatcgcg caggtggggg acagcagagc ctacatcctg cgggaaggca
     9181 agctgttcca gatcaccaag gatcactcct acgtgcagga acaggtcgac gccggcctgc
     9241 tgacctcgga ccaggcgcgc actcaccctt atggcaacgt catcacccgg tgcgtggggt
     9301 cgaacgaaga agtggttccc gatctgtact tcggaaacct gcagtcgggc gacgtgattc
     9361 tgctggcctc cgacggattg accgggatgc tcgaggacga tcagctggca aggatcatga
     9421 aggccgacag cgatccaact cagtgggtgg acacgatgat ttcggacgcc aaccggcgtg
     9481 gcggcctgga caacatcacg gtgatcatcg ttcgggtcga ttcagtggat cccgcaccgg
     9541 cggggaacgg gccgagatca ggtcgctagc aggtggggcg ggccgtcagg ggtgcgctga
     9601 cgacatagcc tttggggtac ggaacggtcg gatcgccctg gaccaggata ccgttgagcc
     9661 ggatcggagt gcattgggcc agcggaagcc gcaacaccag ctcacgtgat ccggggcggg
     9721 cctgggccgt catggcggcc ggtgccacgc tccggtcggc cgggaagaag gtccaggtcc
     9781 ctgcagtcag cgccgcaccc gggctacctc gcaacctcac cagcaccacc gaatcctgga
     9841 gcgatgcctc caccgccggg ccgccctggc ggggagctcg ggcggtccag agaaacgcta
     9901 cccggggcca ttcgtccggc accatcccct ccctccccac cgggatcgca attccaagct
     9961 cggcttttcc gggtacgcac acgtcccggc aaatcccgta gctcagctcg accgcgatcc
    10021 gcgccgttcc caaccccgtc gccgggacgt gaaaccgggt gccgaacacc acatcacccc
    10081 ggtgaatatg ggtggtggag cccgcgacgt cgtaccgctc ggggacgggc cacgagagcg
    10141 gatccacctt ccagccggca ggcagcctcc acacgggatg ggtggcgatc ccggcctcac
    10201 ccgggttccg ccagtagatg tgccagccgt tttccagcct gaaccggagt ccagcccgca
    10261 aggaagcgcc gggcagcgcg gcagtccgct ccgggaccag tgaaatggtg acgtggggat
    10321 ttcggacccg tgcctgagcc gccagccctg gagcgaacca ggcagcggcc agggtcagag
    10381 tgaggaccga acctgccggg atcatatcag agaatctggg ggtggaaacc gaatcagcca
    10441 aatcgggccc gcacttcggg tgccggggac gacaccagcg acgtgatctg gtccaccgcc
    10501 aggttgaccg gacgtgcgac gaacactctg aggcgttggg cgctccgata caactcctcc
    10561 gcgatacggg gaaggcccag gtgaccggct ctaccctcgc tggtgagccg ctcgacccgg
    10621 tggtcccgga gccggagcgg aagatccacg gccagcatgt tgcgacgggc cgggaaatcg
    10681 agcagcagtt cccccggctc gagcccggcg ctccgggcca gcgcgttttc caccagctcg
    10741 agcagatcgg tatcgtcggt cacccattcc tgggcgcccg gaacgtcgct cgcgggaagg
    10801 tcgagggccc gtttgaacag ccggcggtcg cggaccgcca gcgccagccg gctccggtcc
    10861 tgctcgatca gccgctgcat gaacgcgtcg tcggtgagct cggcgatgac gcccaccgag
    10921 accgtgccgc cccggaccgc atcccggacc gcccgtttga acatgcaggt ggcgctccgt
    10981 accgcatggt gccaatacac gttgcggtac atctggtact tggcgaagag gagcgattcg
    11041 agggcgctga cgcctttctc gtgaatcccg acctgatcga ccccgtcgca ggtgacgatg
    11101 gtgagcgatg ccagcagccg gtccacatcc accgtgccgt agggaacgcc gcacatgcgg
    11161 gcgtcccggc tcaggtaatc gatcttgtcg aggtcgaggg tgccggagat cagccccttc
    11221 agcggactgg cactgcggcc ccggatcagc agtccgatct cttcgaccag cgcttctcct
    11281 cccgcgtcgc gcaactcctg gcccagctcc ccatcgcgca gcttggcggt gcctaacgcc
    11341 tcgtgggacg ggaatccggc ctcttccagc gcgtgggaga aagggtagtg cccgatgtcg
    11401 tgcagcaggg ccgccagggt gacggcccgg cagtcagcgg gatcgaggcc cccgtgattg
    11461 gccggctcgg tcgacagcgc cgcgagcgcc cgggtg
//
LOCUS       DASWKS010000658         9991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_357284, whole genome shotgun sequence.
ACCESSION   DASWKS010000658 DASWKS010000000
VERSION     DASWKS010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357284"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /locus_tag="VGA78_18795"
     CDS             complement(<1..540)
                     /locus_tag="VGA78_18795"
                     /inference="COORDINATES: protein motif:HMM:NF013942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEX9895987.1"
                     /translation="MKITVLTGGTSAERDVAIASAVQVVAALRGRGHTVSVVDTARGF
                     IPRADESRLLSGAVGTDPPSNEELVGLERGVLLSGLGNLPAVRDAEVLFLALHGGWGE
                     DGTLQAVLEVVGIPYTGSGPLGSGLAMDKDVAKRLFQSARIPTADWLMTPATSAEAGQ
                     RLGWPLIVKPSKQGSTVGLT"
     gene            complement(567..1955)
                     /locus_tag="VGA78_18800"
     CDS             complement(567..1955)
                     /locus_tag="VGA78_18800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX9895988.1"
                     /translation="MTPPHLRPYDSVLETIGWTPLIRLARVGSGLRTPVYAKAEYANP
                     GGSVKDRIALGIIEAAERAGELKPGGTIVEGTSGNTGVGLAIAAALRGYRCIFTMPDK
                     MSQEKVRLLKAFGAEVVITPTAVPPDHPENYVQKAKQIAQETPGAILANQFYNQENPE
                     AHYRTTGPEIWAQTEGRVTHFVAGAGTGGTVSGAGKFLKERNPAIKVIAGDPVGSLYT
                     GYSITHSMGEGHPYKVEGIGGDKIPSTVWWDWVDQFRQLSDRESFAMTRRLAREEGML
                     VGGSSGLNVALALQVAREADDPDACVVTILCDTGERYLSKVFNDEWMQENQMLEASRA
                     TVEDLMQRRARRAPALVSVAPSAQVRQALNLMRTWDVSQIPVIDDGTCLGTLMDGPLM
                     AQAIAQPALLDRPVREVMETALPVVESSMAADRLALMLTRESPAALVQRDGILIGIVS
                     RMDLLEEMIGTR"
     gene            complement(1952..2305)
                     /locus_tag="VGA78_18805"
     CDS             complement(1952..2305)
                     /locus_tag="VGA78_18805"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEX9895989.1"
                     /translation="MLLSAACASDASQSNGADSTTPPIPQGVAPVEYPPVLFAQKVGG
                     TVELLLFVDSAGVVLPESTRVQRSSGHQALDSAALAAAPRLRYNPATRNGRPVPTSFL
                     QPIHFRPPGSTDSVP"
     gene            complement(2401..3156)
                     /locus_tag="VGA78_18810"
     CDS             complement(2401..3156)
                     /locus_tag="VGA78_18810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9895990.1"
                     /translation="MERHYALAAGYAAALLGWLLLSRAVPLLWPHRDAPHFARPGREL
                     SWAVMGIAGTLLLGFLYVRGMLLPGSFDGFALIDVVNQLIVFAPILLVPVFRRHPLGT
                     LWLPTDRIYIRIATGVLLALLALSTFVLLYAESPPWIEVMQSVYHHSNLPFLLQVLLE
                     DVAAAILAVRIAGVLGPRAAPLLAAVILAASHLTASAALGGAGAVLEGAVLDVVLGAA
                     VVAVVQRSADVWWFWAVHFAMDMTQYATQGLSA"
     gene            complement(3178..5763)
                     /gene="mutS"
                     /locus_tag="VGA78_18815"
     CDS             complement(3178..5763)
                     /gene="mutS"
                     /locus_tag="VGA78_18815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX9895991.1"
                     /translation="MAESPLMQQYHEIKSHHRDAILFFRMGDFYEMFFEDAEVGARVL
                     GITLTSRGDGVPLAGVPVKAAADYLRQLVAAGHRVAVCEQVEDPKKARTIVKRAVIET
                     VTPGAVLEDGWLPGGRNNFIVATDGPTDRPTDGPFGLAAIDLSTGDFFLETVERDRLA
                     EALSRFAPAELVHPADTTDLAPPGEVMRTPRERWEFDPDLARDELARRFRLTSLDGLG
                     LEPGDAPAIGAAGALLRYLTDLQPGGLPHLKRPVARRSERYLWVDDMTRRNLELVEPL
                     RAGVRGVTLLEAIDRTVTPMGARLLRQWVLSPLREPAVIERRLEAVESALKATDFRDA
                     ARAALDGVRDLERLAGRAAAGRANPRDLGALRDSFNRLPGVAEALSGLAGDSVDGPFA
                     DLARRFDPLTNIAAELSSALSDRPPVNPTDGSGVFRPGFNAELDELRSLRDGGKQYLA
                     GLQERERTRTGISSLKVGYNKVFGYYLEVTHAHRSRVPDDYERRQTLTGAERYVTPEL
                     KQYEARVLSAEERLAEREAELFSALRTRVGDAIERIQLTASVLARLDVWTALAEVALR
                     GGYVRPRIGEGLDLELVGCRHPVLERLMPPESFIPNDVHFSPAERVFLVTGPNMAGKS
                     TILRQIGLCVVLAQLGSFVPARAARIGVVDRLFTRVGASDNLAQGQSTFMVEMSETSA
                     ILHNATPRSLVLLDEIGRGTSTYDGVAIAWAVTEHLHDRIGCRTMFATHYHELMQLPE
                     QLEHARNLNVAVRETGDTVVFLHRLEPGGTDRSYGIHVAQLAGLPEAVVRRATGVLHR
                     LEGEHRVAPGTPPAPPDPEQLALFAGASVHEPALEELRALDLDQITPLEALNRLADLQ
                     RKVAR"
     gene            5803..6618
                     /locus_tag="VGA78_18820"
     CDS             5803..6618
                     /locus_tag="VGA78_18820"
                     /inference="COORDINATES: protein motif:HMM:NF022135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEX9895992.1"
                     /translation="MSRFRIVWLVAGLAVAGATLALAHDMFLKPEHFYAEPSSEVLVR
                     LLNGTFSVSENSIARGRLVDVSVVSPEGRERVDTARWSMAGDTSTFRFRTGGAGTYVL
                     GTSTRPNIIPLTGQEFNEYLASDGIPDALEARRKAGELDRGVRERYAKHVKALLQVGE
                     ARSEHFGSPLGYPAEIIPLENPYTLKAGATLGLRLLLRGEAVSNQYVLYGGRTPAGGR
                     IAQRNTRSDAEGLARIRLSGPGTWYVKFIHMRRLEGDSADYESTWATLTFAIK"
     gene            complement(6762..7916)
                     /locus_tag="VGA78_18825"
     CDS             complement(6762..7916)
                     /locus_tag="VGA78_18825"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEX9895993.1"
                     /translation="MRPSVIVLLGVVLAPSMALGQQSYGFIARLGRDTLVVERVTRSA
                     NRLEGQVVSRTPRVVMRHYVADLAPDGTVRRIGVSVRTPNPAPNAPREQHVTVEFGRD
                     TLPVTIRIGDSTTTLRVAARGLAMPWIVYGYGTYEQIFMAARKRGGDSVAVTGYQPGG
                     RNIAPTYVRRQGSDSVALGFFGDAVVARVDREGRLLGLNAEGTTVKVRVERLNDVDVQ
                     GIGQRFAATEASTGAPAALSLRDTVRASVSGSDLLLDYGRPARRGRQIFGQLVPFDKV
                     WRTGANAATQFSTTRDLEFEGGLVVPAGKYTLWTLPTTSGVSFIVNKQTGQWGTVYDS
                     AQDLGRVPLRVEKVDQPLEIFTMLVEPGTAGGRVVMEWDTTRWIASFKVR"
     gene            complement(8039..8878)
                     /locus_tag="VGA78_18830"
     CDS             complement(8039..8878)
                     /locus_tag="VGA78_18830"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX9895994.1"
                     /translation="MRAGALLLCGLGLAGPLAAQSDPQLLAVVRLVQEGQGDSARAMA
                     GRILAATPPTDPKYAEVLYTVARVAASTDDRRLHLQRIAIEYSRSDWADDALLQLAQL
                     AYAARDPAGVVDHIQRLLADYPLSPVRAVAALWGARAAFDQRDRALACQWSDLGLATV
                     GEDVEIRNQLEFQRERCRALVSAESTAAARAAPPPPPPPPPPSASGWQVQVAAFKTAA
                     ETEGTISRLGRMDIPAAAVQDAGWFKVRAGPFPDRARAQQALNRIRRELGVQPFLVPP
                     ARR"
     gene            complement(8875..9927)
                     /gene="holA"
                     /locus_tag="VGA78_18835"
     CDS             complement(8875..9927)
                     /gene="holA"
                     /locus_tag="VGA78_18835"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEX9895995.1"
                     /translation="MSSQSYTESGKLLKQGPIAPCYFFHGPVDLLKDEAIADLLDRLL
                     DPSLRDFNLDQRSANQLAPEDVEALCQTLPMMAERRVVVIRDVEAWGRKTRTKAAVLD
                     YLERPSPGTVLILVQTGGEAKPDPDLLAKSTSISFDPLRREHVEKWLERRATARGIRL
                     APDAAAHLIAVLGDQLGLLAAELEKLAGLSDGTPLSLEQVESLLGARHGETPDDWCRE
                     VLSGDTGRAVAMLPHVLEQPGMSGVRLLMLLGTHLVGVALTRAQFESGTRGRALERAA
                     FDAIKRVRLWGVSWSETASLWAAAAPRWPEERIRRALRAARDADQALKTTTISTEAGI
                     LTDLILGVALTTREAA"
BASE COUNT         1675 a         3308 c         3480 g         1528 t
ORIGIN      
        1 ggtgaggccc accgtgctac cctgcttgga gggcttgacg attagcggcc accccagccg
       61 ctgtcctgcc tccgcggacg tcgccggggt catcaaccag tcagccgtcg gaatccgggc
      121 cgactgaaac aggcgtttgg ccacgtcctt gtccatcgcg aggccgctcc ccagcggccc
      181 gcttccggtg taggggatgc cgactacctc caaaaccgcc tgaagggtgc cgtcctctcc
      241 ccacccccca tgcagcgcga ggaacagaac ctcggcgtcc cggacggcgg gcaaattgcc
      301 gaggccggag agcaggacgc cacgctccag gcccaccaac tcctcgttcg agggcggatc
      361 cgtgccgacc gcaccagaga gcagccgcga ttcgtcggcc cggggaatga acccccgagc
      421 ggtatccact accgagaccg tgtggccccg gccccgcaag gccgcgacga cctgcaccgc
      481 cgaggcaatg gccacgtcgc gttcggcgga ggtgccgccg gtgaggacag tgatcttcac
      541 tttggcctta gtcctaagtc ctggtgttac cgggttccaa tcatttcctc gagcagatcc
      601 atccggctga cgataccgat caggatcccg tctctctgca ccagggcggc cggactctcg
      661 cgggtcagca tgagggccag tcgatcggcg gccatcgagc tttcgaccac ggggagcgcc
      721 gtctccatca cttcccggac cggacggtcg agcagtgcgg gctgggcgat ggcctgggcc
      781 atcaaggggc cgtccatcag ggtgccgaga caggtgccgt catcgatcac ggggatctgg
      841 ctcacgtccc aggtgcgcat gaggttgagc gcctgccgaa cctgggccga gggggccacg
      901 ctgaccaggg ccggagcccg ccgggcccgg cgttgcatca gatcttccac cgttgcgcgg
      961 gatgcctcga gcatctgatt ctcctgcatc cactcgtcat tgaagacttt ggagagatag
     1021 cgctcaccgg tgtcgcacag gatggtgacg acgcaggcat cgggatcatc ggcctcgcgc
     1081 gccacttgca gcgcgagggc cacgttgagc cccgaggacc cgcccaccag catgccctcc
     1141 tctcgcgcca agcgccgggt catggcgaag gactcgcgat cggagagctg ccggaactga
     1201 tcaacccagt cccaccagac agtggacggg atcttgtcgc ccccaatgcc ttccaccttg
     1261 taggggtggc cttcgcccat gctgtgggtg atggagtacc cggtatagag cgatcccacc
     1321 gggtcgcccg cgatcacctt gatggcgggg ttccgctcct tgaggaactt gcccgcgccg
     1381 ctcacggtcc cgccggtgcc agcgccagcg acgaagtggg tgacccggcc ctcggtctgg
     1441 gcccagatct cggggcccgt ggtccggtag tgggcttccg gattctcctg gttgtagaac
     1501 tggttggcca gaatggcccc gggggtttcc tgggcgatct gcttggcctt ctggacgtag
     1561 ttctcggggt gatcgggcgg cacggcggtg ggagtgatga cgacctcggc cccgaacgcc
     1621 ttgagcagcc ggactttctc ctgcgacatc ttgtccggca tggtgaagat gcaacgatac
     1681 ccccggagcg ccgccgcgat ggccaggccc acgccggtgt tgcccgaggt gccttccacg
     1741 atggtgccgc caggcttcag ctcgccggcc cgctcggccg cttcgatgat gcccagcgcg
     1801 atccgatcct tgaccgagcc gcccggattg gcgtactcgg ccttggcgta gaccggggtc
     1861 cgaagcccgg agcccacccg ggccaggcgg atgagcggag tccagccgat ggtctccagc
     1921 acggagtcat aggggcggag atgaggcggc gtcatgggac cgagtcggtg ctccccgggg
     1981 gacggaagtg gatcggctgc agaaacgagg tgggcaccgg acgcccgttt cgggtcgcgg
     2041 ggttataccg caaacgcggc gccgccgcga gtgcggccga gtccagcgcc tggtggccgc
     2101 tggagcgctg gacccgggtg gactccggca gaaccacgcc ggccgaatcg acgaacagca
     2161 gcaactcgac ggtccctccc accttctggg cgaacaagac cgggggatac tccaccggcg
     2221 ccacgccctg gggaataggc ggggtggtgg aatcggcccc gttgctctgg gaggcgtcgc
     2281 tggcgcaagc ggcggacagc aacaacagga ctaaggactt aggactcagg actaagtaag
     2341 gcctaagggg gagggttcga agtttagaca atctgatcat gagaggctta gtccttagcc
     2401 ctaagcactt agtccttgag tcgcgtactg ggtcatgtcc atggcgaaat ggacggccca
     2461 gaaccaccag acgtcggccg agcgctggac cacggcgacc acggctgcac caaggacgac
     2521 gtcgagcacg gccccttcca gcaccgcccc ggcaccgccc aaggccgcgg aggcggtgag
     2581 gtgactggcc gccaggatca ccgcggccag gagcggagcg gctctggggc ccagcacgcc
     2641 ggcgatccgg acggcgagga tcgcggcggc gacgtcctcc agcagcacct gcaacaggaa
     2701 gggcagattg ctgtgatggt aaaccgattg cattacctcg atccagggcg ggctttcggc
     2761 gtagaggagc acaaaagtcg agagcgcgag cagggccagg agcaccccgg tggcgatccg
     2821 gatgtagatc cggtcggtcg gcagccagag ggtgcctagc gggtggcggc gaaacaccgg
     2881 gaccagcagg atcggggcga acacgatgag ctggttcacc acatcgatca gcgcgaatcc
     2941 atcgaacgac ccgggaagca gcatgccccg gacatagagg aagcccagca gcagggtgcc
     3001 ggcgattccc attaccgccc agctgagctc gcggccggga cgggcgaagt ggggtgcgtc
     3061 ccggtggggc cacaacagcg ggaccgcgcg cgacagcagg agccacccca gcagggccgc
     3121 ggcgtaacct gctgccagcg cgtagtgacg ctccacgagt cgctctcccg gcggcgccta
     3181 gcgcgccacc ttccgttgca gatcggccag ccggttcaac gcctcgagcg gggtgatctg
     3241 gtcgagatcg agcgcccgca gctcttcgag cgccggctcg tggaccgagg cgccggcgaa
     3301 cagggcgagc tgctctggat caggtggggc gggcggcgtg ccgggtgcga cccggtgctc
     3361 gccttccagg cggtggagca cgccggtggc tcgtcggacc acggcttccg gcaagccggc
     3421 caactgggcg acatggatgc cgtagctccg atcggtccct cccggctcca gccggtgcag
     3481 gaacaccacg gtgtcccccg tctcccggac cgccacgttg agattgcggg cgtgctccag
     3541 ctgctcaggg agttgcatca gctcgtggta gtgggtggcg aacatggtcc ggcatccgat
     3601 acggtcgtgg aggtgctcgg tcacggccca ggcaatggcg acgccgtcat aggtcgaggt
     3661 cccgcgcccg atctcgtcga gcagcaccag gctccgcggg gtggcgttgt gcaggatggc
     3721 gctggtctcg ctcatctcca ccatgaaagt cgactggccc tgcgccaggt tgtcgctcgc
     3781 gcccacccgg gtgaacagcc ggtctaccac gccgatccgg gccgcccgcg ccggcacgaa
     3841 cgatcccaac tgagccagga ccacacacag gccgatctgg cggaggatgg tggacttgcc
     3901 ggccatgttg ggcccggtca ccagaaacac ccgctccgcg gggctgaaat gcacgtcgtt
     3961 gggaatgaag ctctcgggtg gcatcagcct ttcgaggacc ggatggcggc accccaccag
     4021 ctccaggtcg aggccctccc cgatccgagg gcgcacgtag ccgccgcgca gggccacctc
     4081 cgccagcgcg gtccagacgt cgagccgggc cagcaccgac gcggtgagct ggatccgttc
     4141 gatggcgtca cccacgcggg tccgcagcgc gctaaagagt tccgcctcgc gctcggccag
     4201 ccgctcttcg gcgctcagga cccgggcctc gtattgcttg agctcgggcg tgacatagcg
     4261 ctccgctccg gtcagggtct ggcggcgttc gtagtcgtcg ggaacccggg agcggtgggc
     4321 gtgggtcact tcgaggtagt aaccgaaaac cttgttgtac cccaccttga gggacgagat
     4381 accggtccgg gtccgctccc gttcctgcag gccggccaga tactgcttac cgccatcgcg
     4441 cagggagcgg agctcatcga gctcggcgtt gaagccgggc cggaaaacgc cgctaccgtc
     4501 ggtcgggttg acaggtggtc ggtcggacag agcggaggag agctcggccg cgatattggt
     4561 gagggggtcg aagcgacgag ccaggtcggc aaagggtccg tcgaccgaat cgccggcgag
     4621 cccgctcagg gcctcagcca ctcccggcag gcgattgaac gaatcgcgca gggccccgag
     4681 gtccctcggg ttggctcggc ccgcggcggc ccggccagcc agccgttcca gatcgcgtac
     4741 cccgtcgagg gccgcacggg ccgcgtcgcg gaagtcggta gccttgaggg cgctctcgac
     4801 cgcttcgagg cggcgctcga tcacggccgg ctcgcggaga ggcgagagga cccactggcg
     4861 cagcaaccgg gcgcccatcg gcgtgacggt gcgatcgatc gcttccagca gggtgacgcc
     4921 gcggactccg gcgcggagcg gctcgaccag ctccaggttt cgccgggtca tgtcgtcgac
     4981 ccagaggtac cgctcggagc gccgggccac ggggcgcttg aggtggggca gtccgccggg
     5041 ctgcaggtcg gtcaggtagc gaagcagagc tccggccgct ccgatggcgg gagcatcgcc
     5101 gggctcgaga cccagtccat cgagcgatgt gagccggaac cgacgcgcca gttcatcgcg
     5161 ggcaaggtcg gggtcgaact cccagcgctc ccggggcgtg cgcatgacct cgcccggtgg
     5221 cgcgaggtcg gtggtgtcgg ccggatggac cagctcggct ggggcgaacc ggctcagtgc
     5281 ctcggcgagc cgatcccgct ccacggtctc gaggaaaaag tccccggtcg aaaggtcgat
     5341 cgccgccagg ccgaacggtc cgtcggtcgg tcggtcagtc ggtccgtcgg tcgccacgat
     5401 gaagttgttg cggccgccgg ggagccagcc gtcttccaga accgcgccgg gggttaccgt
     5461 ctcgatcacc gcgcgcttga cgatggtgcg ggccttcttg ggatcttcca cctgctcgca
     5521 caccgccacc cggtggccgg cggcgacgag ctgtcgcaga tagtcggcag cggccttgac
     5581 cgggacaccc gccaggggca cgccatcgcc gcgggaggtc agggtgatgc cgagtacccg
     5641 ggctcccact tcggcgtcct cgaagaacat ctcgtagaag tcgcccatgc ggaaaaacag
     5701 gatcgcgtcc cggtgatggg acttgatctc gtggtactgc tgcatgaggg gggattcggc
     5761 cacgatgaaa actagtcact acattggtgt cgggaggcat ccatgagccg ttttcggatt
     5821 gtctggctgg tcgctggatt ggcggtcgcc ggagccacgc tggcgctggc gcacgacatg
     5881 ttcctcaagc cggagcactt ctacgccgag ccgagcagcg aggtgctggt gcggctcttg
     5941 aatggcacct tcagcgtgag tgagaactcg atcgcgcggg gccggctggt ggacgtgagc
     6001 gtggtttcgc ccgaggggcg ggagcgggtc gatacggcgc gctggagcat ggccggggat
     6061 accagcacct tccgattccg caccggcggg gccggcacct atgtcctcgg cacgtcgacc
     6121 cggcccaaca tcatcccgct caccgggcag gaattcaacg agtatctggc gagcgatggc
     6181 attcccgatg cgctggaagc gcgccggaag gcgggcgagc tggaccgcgg ggtgcgggag
     6241 cgctatgcca agcacgtgaa ggcgttgctg caggtgggcg aagcccggag cgagcacttc
     6301 ggaagcccgc tgggttatcc ggcggagatc attcccctgg agaaccccta taccctgaaa
     6361 gccggcgcga cgctgggact ccgactcctg cttcggggcg aagcggtctc gaaccagtac
     6421 gtgctgtacg gcgggcggac cccggccggc ggtcgaatcg cccagcgcaa cacccggtca
     6481 gatgcggagg ggctggcgcg gatccggctc agcgggccgg ggacgtggta cgtgaagttc
     6541 attcacatgc gcaggttgga aggagatagt gccgactacg aatcgacgtg ggcaacgctg
     6601 acttttgcaa tcaagtgaga gggggggagg gaggagggcg gagtcaatgc agagtgacca
     6661 atgcccaatg cccattgcag agggtgggga acaggcacga ccctcttcat tgggcattcg
     6721 gcattcggca ttctgcattc actcccccct ccgccctccc actatctcac cttgaacgat
     6781 gcaatccatc gcgtagtatc ccattccata accacacgcc cgccggcagt gccgggctcc
     6841 accagcatgg tgaagatctc caacggttga tcgacttttt ccacccgcag cgggacccgg
     6901 cccagatcct gggcgctgtc atacactgtt ccccattgtc cggtctgctt gttgacgatg
     6961 aaggaaacgc cgctggtggt gggaagggtc cagagggtgt acttcccggc cggaaccacc
     7021 agcccgcctt cgaactccag atcgcgagtg gtggagaact gcgtggcggc gttggcaccg
     7081 gtgcgccaga ccttgtcgaa cggcaccaac tggccgaaga tctggcgtcc ccgccgggcc
     7141 gggcggccat agtccagcag caggtccgag ccggaaacgg aggcgcggac tgtgtcccgg
     7201 agcgagagcg cggccggcgc accggttgag gcctcggtgg cggcgaaacg ctggccgatc
     7261 ccctgtacat cgacgtcgtt cagccgttct acccgcacct tcacggtggt tccctcggcg
     7321 ttcagtccca gcagccgtcc ctcgcggtcg acccgagcca ccaccgcatc accgaagaag
     7381 cccagcgcca ccgaatcgga tccctggcgt cgcacatagg tcggcgcgat gttgcgcccc
     7441 cccggctgat accccgtcac cgccacgctg tcgccgcccc gcttccgggc cgccatgaag
     7501 atctgctcgt aggtcccata gccatacacg atccagggca tcgccaggcc ccgagccgcc
     7561 acccggagcg tggtggtgct gtcgccgatc cgaatggtga cgggcagggt gtcgcgaccg
     7621 aactcgaccg tgacgtgttg ctcgcgcggg gcgttaggcg ccggattggg agtccggacc
     7681 gataccccga tgcggcgcac ggttccgtcg ggcgccaggt cggccacgta gtgccgcatc
     7741 accacccgcg gggtccggga cacgacctga ccttccagcc gattggcgga gcgggtgacg
     7801 cgttccacca ccagggtatc gcgtcccagc cgggcgatga agccgtaaga ctgctggccg
     7861 agcgccatcg agggcgccag gacgacgccg agcaacacga tgacagaggg tcgcattcgt
     7921 cactcctaac cggaaacccc aggcagcggg gagcaggggg cagggagcag ggagcaggga
     7981 gcagggagca agaagcgaga ccagcatcaa cctctaccga ttctggtccc cctgggtttc
     8041 agcgccgggc gggggggacc aggaagggtt gcaccccgag ctcgcgccga atgcggttca
     8101 gggcctgctg ggcccgcgcg cggtcgggga aaggcccggc cctgaccttg aaccagccgg
     8161 catcctgcac cgcggcggct gggatatcca tgcggccaag ccgggagatg gtgccttccg
     8221 tttcggctgc ggtcttgaag gccgcgacct gcacctgcca gcccgaggcc gagggtggcg
     8281 ggggtggtgg tggcggtggt ggagctgccc gggccgcggc ggtgctttcg gcgctgacca
     8341 gggcgcggca ccgctcgcgc tgaaactcga gctggttccg gatttcgaca tcttctccca
     8401 ccgttgcgag tcccaggtcg gaccattggc aggccagggc gcgatccctc tggtcgaacg
     8461 cagcacgggc cccccagagc gccgcgaccg cgcggaccgg actcagcgga tagtcggcca
     8521 ggagccgctg gatgtggtcg accacgccgg ccgggtcccg ggctgcgtat gccaactgcg
     8581 ccagctggag cagcgcgtca tcggcccagt ccgaccggga gtactcgatg gcgatccgtt
     8641 gcagatgcag ccggcggtcg tcggtgctgg ccgccacccg ggcgacggtg taaagcactt
     8701 cggcgtactt ggggtcggtg ggtggagtcg ccgccagaat gcggcccgcc atggcccggg
     8761 ctgaatcgcc ctggccttcc tgcaccagac gaaccaccgc caacagttgg ggatcggatt
     8821 gggcggccag cggcccggcc agccccaacc cgcagagcag cagcgctccc gctctcatgc
     8881 ggcctcccgg gtggtcagcg ccacgccgag aatcagatcg gtgagaatgc cggcttcggt
     8941 cgaaatcgtc gtggtcttga gggcttgatc ggcgtcccgg gcagcacgaa gggctcgacg
     9001 gatgcgctcc tcgggccagc gaggggcggc cgctgcccag agggaggccg tctcactcca
     9061 gctcacaccc cagagtcgga cccgcttgat ggcatcgaag gcggcccgct ccagcgcccg
     9121 accccgggtc ccgctctcga actgggcccg ggtcagcgcc acgccaacca gatgggttcc
     9181 caacaacatg aggagccgga cccccgacat cccgggctgc tccagcacgt gcggcagcat
     9241 ggcaaccgcc cgtccggtgt ctcccgacag cacctcccga caccagtcgt cgggggtttc
     9301 gccgtggcgc gcgccgagca gcgactccac ctgctccagc gagagcggcg tcccgtcgct
     9361 caatcccgcc agcttttcga gctcggccgc gagcagcccc aactggtccc ccaggacggc
     9421 gatcaagtgc gcggcggcat cgggcgcgag ccgtatcccc cgggccgtcg cgcggcgttc
     9481 cagccatttc tcgacgtgct cgcggcgcag cgggtcgaac gagatggagg tggatttcgc
     9541 cagcaggtcc ggatccggct tggcttcgcc tccggtctgg accaggatga gcacggttcc
     9601 aggtgacggc cgctcgaggt agtcgaggac ggcggccttg gtccgggtct tccgtcccca
     9661 ggcctccacg tcgcggatga cgaccacgcg acgctcggcc atcatgggta aggtctggca
     9721 cagcgcctcg acatcttccg gtgccagctg attggcggac cgctggtcca ggttgaaatc
     9781 gcgcagcgag gggtcgagca gccgatccag cagatcggca atggcctcgt ccttgagcag
     9841 atccaccgga ccgtggaaga agtagcaggg cgcaatcggc ccctgcttca ggagcttgcc
     9901 ggattcggtg taggactgag atgacattga tcaatactaa caaccggcaa agggccaggg
     9961 agcaggaagc agggagcggg gagcagggag c
//
LOCUS       DASWKS010000659         3978 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_735045, whole genome shotgun sequence.
ACCESSION   DASWKS010000659 DASWKS010000000
VERSION     DASWKS010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3978
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735045"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1301)
                     /locus_tag="VGA78_18840"
     CDS             complement(<1..1301)
                     /locus_tag="VGA78_18840"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX9895996.1"
                     /translation="MRVLLASGLLVGAYAVGLHTWIAAQLLSSYTGGMTFELVEGLSP
                     NPALSAAGPYDERLGYRQLPETIERLEAHGFRVAKQANVSARFERVRRLGLFPLYTEK
                     TQAGLRIVGHDGRVISPSLFPERVYPSFEMIPPLIVSSLLFLENRELLDDRDPHSNPA
                     VEWDRLAAAVIHHAGGRFLGGDGRFGASTLATQLEKVRHSPDGVTGSASEKVRQMGTA
                     TLRSYLQGPRTDLVRRQILTDYLNSLPVGAVPGYGEIIGVRDGMRAWFGLDPDSADIA
                     LRRISPERVTDEAARAYRAALALLLAQRRPTHYLLSQAGRESLNRLTDAHLRILAADS
                     VIPDQLAAAALKVDLASRPHAPPGLPISFVERKAINSVRSHLLDLIGVSNLYQLDRFD
                     LTVQASVDGGAQKAVTERIRDLGRREFVRSAGLTGERLLGEG"
     gene            complement(1605..2081)
                     /locus_tag="VGA78_18845"
     CDS             complement(1605..2081)
                     /locus_tag="VGA78_18845"
                     /inference="COORDINATES: protein motif:HMM:NF018430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HEX9895997.1"
                     /translation="MSYRVHAIPQDVADEVRATMRSPGYGHPAHRELAKGTGPCRSCL
                     RPFRVGQDERILFTYQPFDGLGLPSPGPIFIHAEPCQRYQGHQIPRELLSIPLILEAF
                     TEDGLSLGRLALGKRDPDDAMAELLFDTGAEYIHLRHAEAGCFIARVEPVRIHEFV"
     gene            2252..3652
                     /locus_tag="VGA78_18850"
     CDS             2252..3652
                     /locus_tag="VGA78_18850"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9895998.1"
                     /translation="MLVAATIALAGAMVQDTVTPQLRPFVRVSAPVIALTNVRVVDGT
                     GAPGRAGQTVILRGGTIAAVGDAGSTPVPAGAETLDLEGRTVLPGFVMLHEHMFYPAG
                     NAVYGWQGWSFPRLYLAGGVTTARTGGNVQGYADLNLKRDIDAGRVPGPDLDVTAPYL
                     NGAGLPIAQVKALRGPEDARAMVEQWAGEGATSFKAYMQISRAELAAAIGAAHHRGLK
                     VTGHLCSVTYREAADLGIDNLEHGFVASTDFVSGKEPDRCPPNPNQSLLSVDLGGPVF
                     QDLVRHLVARKVALTSTLTVFETYTPGRPRAPDRVLDAMLPEVRDQYLRTFAQVAVNR
                     QSPYANLFTKAMAMEREFAKAGGLLVVGTDPTGYGGVVAGFANQRAVELLVEAGFTPV
                     EAIRIATLNGAVYLGRQERIGTIAVGKQADLIVVNGDPSTRIEDIRRMEIVFKRGIGY
                     DSEKLFAAVKGTVGLR"
BASE COUNT          689 a         1293 c         1375 g          621 t
ORIGIN      
        1 ccttcaccca ggagccgctc cccggtcagc ccggccgatc gcacgaactc gcgccggccc
       61 aggtccctga tccgctcggt cactgccttt tgtgccccgc cgtccacgct ggcctggacc
      121 gtgaggtcga accgatccag ctggtagagg ttggataccc caatcaggtc cagcaagtgc
      181 gaccgcaccg agttgatcgc cttgcgctcg acgaaggaga tgggcaaccc gggaggtgcg
      241 tggggccggc tggccagatc cacctttagt gccgcagccg cgagctgatc ggggatgacg
      301 ctatcggccg cgagaatcct caggtgcgca tctgtcagcc ggttgagtga ctcgcgtcca
      361 gcctggctca agaggtagtg ggtcggccgc cgctgagcca gcagcagcgc cagcgccgcg
      421 cgataggcgc gggcggcctc gtcggtcacc cgctcaggtg agatccgccg cagggcgata
      481 tcggccgaat cgggatcgag accgaaccag gcccgcatgc cgtcgcgcac gccgatgatt
      541 tccccgtaac cgggaacggc gccgaccgga agggagttga ggtaatccgt gagaatctgg
      601 cgccgtacca ggtcggttcg cgggccctgc aggtaggacc ggagcgtggc ggttcccatc
      661 tgacggactt tctcactagc cgatccggtg actccatcgg gcgagtgccg gaccttctcg
      721 agctgagtcg cgagcgtgct ggcgccgaaa cggccatccc cgcccagaaa ccggccgccg
      781 gcgtggtgga tgaccgccgc ggccagccgg tcccactcca ccgcgggatt actgtgagga
      841 tcgcgatcgt ccagcagctc ccggttttcc agaaagagca gcgagctcac gatcagcggg
      901 ggaatcatct caaaggaggg gtagactcgc tccgggaaga gcgacgggga gatcaccctg
      961 ccgtcgtggc ccacgatgcg gaggccggcc tgggtcttct ccgtgtaaag cgggaacaat
     1021 cccagccgcc gcacccgttc gaaccgggcc gacacgttcg cctgcttcgc gacccggaag
     1081 ccgtgcgctt ccagtctctc gatggtctcc ggcaactggc gataaccgag acgctcgtca
     1141 taaggaccgg cggccgagag ggccggattg gggctcagcc cttcgaccag ctcgaacgtc
     1201 atcccgccgg tatagctcga gagcagctgg gcggcgatcc aggtgtgaag tcccaccgca
     1261 tacgcgccga ccagcaggcc agaggccagc aggacccgca cggtgatctt cagccagggg
     1321 gggaggccgc ccaggcgagg aaccttgcgg tcgagtgtgg ggctgtcttg aaaaagcgag
     1381 accaggtcgg ctgcagtccc gctacttgca cgttccatcc gaccccgcgt cagcgaactg
     1441 gataccggac ataccgcaac tagcgatcca acctcgggga gaggggaggc gggaggcggg
     1501 aggcgggagg ccggaggcgg caggcgggag aacctccatc tgggggaggt gggaaggtcg
     1561 gtcagagctc ccgtccccct ctcccgcctc ccgcctcccg cttttcagac gaattcgtga
     1621 atcctgaccg gctcgacccg cgcgatgaag catcccgctt ccgcgtggcg caggtggatg
     1681 tattcggcgc cggtgtcgaa caacagttcg gccattgcat catccgggtc tctcttgcca
     1741 agcgcgagac ggcccagcga caggccgtcc tcggtgaacg cctcgagtat cagcggaatc
     1801 gacaggagct cccgggggat ctggtgcccc tggtatcgct ggcacggctc ggcgtggatg
     1861 aagatcggac ccggtgacgg caggcccaac ccgtcgaagg gctggtaggt gaaaagaatt
     1921 cgttcatcct ggccgacccg gaagggacgg agacagctgc ggcaggggcc agtgcccttt
     1981 gccagctcgc ggtgggccgg gtggccgtag ccgggcgacc gcatggtagc ccgcacctcg
     2041 tctgccacat cctgaggaat cgcatgtaca cggtagctca ttgggcgctc tcatcggttg
     2101 acgacaacac gttaccggag ccggcgctgg caggcgatcc gactcatgct cccaaagtct
     2161 cccgggacga agtctcgatt gggctgcgaa gctgttccgg ttcggccaca gccaggccag
     2221 atttcccgcc ctacccttcc gggattcgac catgctggtt gccgcgacca tcgccctcgc
     2281 gggcgccatg gtgcaagaca ccgtgacccc acagctccgc cccttcgtcc gcgtctcggc
     2341 cccggtcatc gcgctcacca acgtgcgggt ggtcgacggt accggcgccc cggggcgggc
     2401 gggacagacc gtgatcctcc ggggcggtac catcgcggcc gtgggtgacg cggggtccac
     2461 cccggttccg gccggtgccg agacgttgga tctcgagggg cggacggtgc tccccggatt
     2521 cgtgatgctg cacgagcaca tgttctatcc cgcgggaaat gcagtgtacg gctggcaggg
     2581 gtggagcttt ccgcggctct atctggccgg cggcgtcacc accgcccgca ccggcggcaa
     2641 cgtgcagggg tacgccgacc tcaatctcaa gcgtgacatc gatgcgggcc gggtaccggg
     2701 acccgatctg gatgtcacgg cgccgtactt gaacggagcg ggtctcccca tcgcgcaggt
     2761 gaaggccctg cgcggaccgg aggacgcgcg ggccatggtg gagcagtggg ccggcgaagg
     2821 cgcgacctcg ttcaaggcct acatgcagat ttcccgcgcc gaattggcgg cggcgatcgg
     2881 cgcggcccac caccgcgggc tcaaggtgac gggccacctc tgctcggtca cctaccgcga
     2941 ggccgccgat ctgggaatcg acaacctgga gcacggcttt gtggccagca ccgatttcgt
     3001 gtccggcaag gagccggacc ggtgtccgcc caaccccaat caatcgctgc tgtcggtgga
     3061 cttgggcgga ccggtgttcc aggacctggt caggcacctg gtcgccagga aggtggcgct
     3121 cacttcgacc ctcacggtgt tcgagaccta cacgcccggg cgtccccgcg ctccggaccg
     3181 ggtcctcgac gccatgctgc ccgaggtgcg cgaccagtac ctgcggacct tcgcccaggt
     3241 cgcggtgaac cgccagtcac cctacgccaa cctcttcacc aaggcgatgg cgatggagcg
     3301 ggagttcgcg aaggccggcg ggctgctggt ggtggggacc gatcccaccg gctacggcgg
     3361 cgtggtggcc gggttcgcca atcagcgcgc ggtcgagctg ctggtggagg cgggctttac
     3421 tccggtcgag gccatccgga ttgcgacgct gaacggggcg gtctatctgg gccggcagga
     3481 acgaatcgga accatcgcgg tgggtaagca ggccgacctg atcgtggtga acggcgaccc
     3541 atccacccgg atcgaggaca ttcgccgaat ggagatcgtg ttcaagcgcg ggatcggcta
     3601 cgactcggaa aagctgttcg cggccgtgaa ggggacggtg ggacttcgct gacgggcgga
     3661 cgggcgggcg gacggaccga ccgaccgact gaccgactga ccgactgacg tcgcgcaccc
     3721 gccggaagca gcgtgctcta agacttctgg aaggggaagc gccacgggat tcctcccggg
     3781 gcgctggatc gcgactgcat gctgagaaca ggacaaggcc gaggacactg cagagggagc
     3841 gatgcgaaac gcaacgcacg gatgatcctc caccgagacc gtatgcacgt ctagatacag
     3901 tcgcgactgg ctggtgaagg tggcggagtg cggttacgac ccatggagaa tcctgccgat
     3961 ctggccgggg gtgaatcg
//
LOCUS       DASWKS010000660         5682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_360011, whole genome shotgun sequence.
ACCESSION   DASWKS010000660 DASWKS010000000
VERSION     DASWKS010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5682
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360011"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VGA78_18855"
     CDS             <1..1259
                     /locus_tag="VGA78_18855"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX9895999.1"
                     /translation="WFGDRFPPRGKAVVLIRRRLVPAGWVRNQVRRAAGRAGLAVRAE
                     FLPVPNLDQVEAFLIRDRDPTEWRLGRSPRLPVSLKQPREHVFFLAPADGATGFSEAA
                     RLLNRATGDHDFSVERFHLRRRGALVLVLAGADDARRLVRVATNPTTAGLVRKNRSIT
                     ERLRDRPDLAPAARGLIPSPLGESGNGIVEAFVEEFRPGRLAWLLYRDPECRVRIEDD
                     LFRFSHGFQSSTRRESRLEGRLLDDLIEGYLEPIRVRLGAEPGIARLLDLAGTRLRRL
                     LEGRARSLCASHGDFGVGNALAAADGTITAIIDWDQYQDQDLPGIDWCDYRLKVEHFR
                     LSVFDGLRQLVDDAVRTGFLAPRQKGFGEEDFGLRRADMRTIPCLAVLREVSRAARFP
                     GELQSSVSHYAALLDLVNRFMPEAPE"
     gene            1256..2527
                     /locus_tag="VGA78_18860"
     CDS             1256..2527
                     /locus_tag="VGA78_18860"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX9896000.1"
                     /translation="MNQRPGVLIVDQGASFGGSALVASVIVNRMPPDRYRVFLAAAVE
                     AEVLRVTEVAQSRVVHLAKPYDYVGQARTRERLAVLPGSVRRLGGWADTGLRLLRNAG
                     YTRRLMTLIREEGIALLHLNNGFENLEAHLAAGLTATPALVHAHGPCGNSYVTRRLAR
                     RAPACIAISKPVVESFRSVEASPGRIALLSNPLTVEPGNLSAAERSRSRARYGIPPDL
                     VLVGIVGRIVAWKGQLEFLRAAALALRQVPGSGAVIIGDVTDANDAYGRLLRDEVRQL
                     GLQDRVWFTGFIQDPDEAYGLLDVLVHSSIEPEPFGLVLTEAMAYGIPVVAAGSGGPL
                     EIVTDGVDGFLRDPRDVAAVGVLLAQLLRDPGRRARVGSAGRATVLRRFDPDQYVRRI
                     AEVYDAVLERNAGVLSTSGVDGGPFGERPPQ"
     gene            2776..4587
                     /locus_tag="VGA78_18865"
     CDS             2776..4587
                     /locus_tag="VGA78_18865"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX9896001.1"
                     /translation="MTLESVPPPRQRIHLVMAGHVDHGKSTVIGRLLVDTNSLPQGKL
                     EQIRELCARTARPFEYAFLLDALKDEQAQGITIDAARVFFKTARRDYIILDAPGHIEF
                     LRNMVTGAAHAEAALLVIDAEEGIRENSRRHGYMMSLLGIGQLAVVVNKMDLVGYRRE
                     VFERIAADYGRFLDEIGVKPRAILPACAREGENIAAPGPHLGWYDGPTVLEVLEQFEP
                     ERPPVDKPFRMPVQDVYKFTEEGDDRRIVAGTIESGGVAPGDEVVFYPSGKKARVKSL
                     EAFNGPPPARAIAGQAAGFTLAEQIYVARGELAALATEVRPHVTTRLLVSLFWLGRGP
                     LVKRKDYLLKLGTAKVLARVEEIHRVIDGSTLAARDGTDRVDLHEVAECTLQLQRALA
                     FDDPEVALATSRFVLVDDSDIRGGGIVREALPDRQTWVRDKVLLRNFKWEASFIPGER
                     RAERYGQKPVLLLLTGPRAVDRKRLAKELEVRLFNDGRVVYFLGMGNVLYGVDADLER
                     TGNRAEHMRRLAEVANIMLDAGVILLVSAAELTAEDLELIRASVGADRVSTVWLGDRV
                     TTDFRADLVVGEDEPLADAVERLRNFLHEAGVLFRPW"
     gene            4618..5346
                     /gene="cysC"
                     /locus_tag="VGA78_18870"
     CDS             4618..5346
                     /gene="cysC"
                     /locus_tag="VGA78_18870"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF003013.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEX9896002.1"
                     /translation="MFRETHARSVAKALSWRILGTIATSLLVFLFTRRLVLSLAVGAV
                     EFVSKLGLFWFHERVWDRIRFGKQQVEPAVIWFTGLSGSGKSTIADRVARELADRGHR
                     VERLDGDVVRNIFPNTGFTRPERDQHVRRIGFLASTLEKNGVFVVASFVSPYEDSRQF
                     VRGLCRNFLEVYVATPLGECERRDVKGLYARARRGEIDHFTGISDPYEPPARPELVID
                     TMKSSPEQAGEQVLAALRGRNNGV"
     gene            5343..>5682
                     /locus_tag="VGA78_18875"
     CDS             5343..>5682
                     /locus_tag="VGA78_18875"
                     /inference="COORDINATES: protein motif:HMM:NF013658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase family
                     protein"
                     /protein_id="HEX9896003.1"
                     /translation="MTVDHLDRLETQSVHVLREAYANFRSLCLLWSIGKDSTVLLWLS
                     RKAFFGHVPYPLVHIDTSYKIPEMIAYRDRLALEWKLTMLVGQNREALESKRTFPEGA
                     VDRIGCCRLLK"
BASE COUNT          892 a         1795 c         1991 g         1004 t
ORIGIN      
        1 cgtggttcgg ggaccgcttc ccacctcggg gcaaggcggt ggtcctcatc cgccgccgac
       61 tggtacccgc cggctgggtc agaaaccagg ttcgacgggc cgccgggcgg gcggggctcg
      121 cggtccgggc ggaattcctt cccgttccga atctcgacca ggtcgaagcg ttcctgattc
      181 gggaccggga tccgactgag tggcgcttgg ggcgttctcc gcgactcccg gtctcgctca
      241 aacagccgcg ggagcatgtc ttttttctcg ctccagcaga cggagccacc ggattcagcg
      301 aggcggccag gctgctgaac cgcgccaccg gggaccacga cttctcggtc gagcgcttcc
      361 acctccggcg tcgaggagcc ctggttctgg tgctggcagg cgctgatgac gcccgccggc
      421 tggtcagggt ggcgaccaac ccgacaacag ccggcctggt gcgcaagaac cggagtatta
      481 ccgagcggct ccgagaccgc cccgacttgg cgcccgctgc ccggggtctg atcccatcgc
      541 ccctggggga gtccggcaat ggtatagtcg aagccttcgt cgaggaattc cggcccggtc
      601 gcctcgcctg gttgttgtat cgggaccccg agtgtcgggt gcggatcgag gacgacctgt
      661 tccggttttc tcacgggttt cagtcctcca ctcggcggga aagtcgtctg gagggccggt
      721 tactcgacga tctgattgaa ggctatctcg agcccatccg cgtccgattg ggagcggagc
      781 cggggatcgc ccgcctgctg gatctggctg gcacccggct tcgccggttg ttagaggggc
      841 gagcccggtc tctgtgtgcc tctcatggcg acttcggcgt cggcaatgcc ctcgccgccg
      901 ccgacgggac catcacggcg atcatcgact gggatcagta ccaggaccag gacctgccgg
      961 ggatcgattg gtgtgattac cggttgaagg tggagcactt ccggctcagt gtgtttgacg
     1021 gcctccggca gctcgtggac gatgccgtga gaaccggctt cctggcacct cggcagaagg
     1081 ggttcggtga agaagacttc ggtttgaggc gggcggatat gcggaccata ccctgtttgg
     1141 cggtcctgcg tgaggtcagc cgtgccgccc gtttcccagg cgaactgcag agctcggtgt
     1201 cccactatgc cgcgctgctg gacctggtga atcggttcat gcccgaagct ccggaatgaa
     1261 ccagcgcccc ggcgtgctca ttgtggatca aggggcttcg tttggcggct ccgccctggt
     1321 cgcgtcggtg atcgtcaacc gcatgccgcc ggaccgttac cgggtgtttc tggcagccgc
     1381 ggtcgaggcc gaggtcctgc gggtgacgga agtggcccaa tcgcgggtcg tgcatcttgc
     1441 caagccttac gactatgtcg ggcaagcccg cacccgggaa cgcctggccg tccttccggg
     1501 ttcggtccga cggctcgggg gatgggccga caccgggctc agactgctgc gcaatgccgg
     1561 ttacacccgc cgcctgatga cgttgattcg cgaagaagga atcgcgttgc tgcacctcaa
     1621 caacggcttc gagaatctgg aggcgcacct cgccgccggg ctcaccgcca caccggcgct
     1681 ggtgcacgcc cacggcccct gtggtaactc gtatgtcacc cggcgcctcg cccgccgagc
     1741 gcctgcctgc attgcgattt cgaagccggt ggtcgagagc ttccggagtg tcgaagccag
     1801 tccgggacgc atcgccctcc tctccaatcc actgacggtc gaacccggta atttgtcggc
     1861 ggccgaacgg agccggtcga gggcccgcta cggcatcccc cccgatctgg tgctcgtggg
     1921 catcgtgggc cggatcgtgg cctggaaggg ccagctggag tttctccgtg cggccgccct
     1981 ggcgctgcgc caggttcccg gaagcggcgc cgtcatcatt ggcgatgtta ccgacgcgaa
     2041 cgatgcgtac ggtcgcttgt tgcgggacga ggtccggcag ctcggcctgc aggaccgggt
     2101 gtggttcacg ggattcattc aagatcccga cgaggcctat ggtctcctgg acgtgctggt
     2161 ccacagctcc attgaaccgg agccgttcgg actggtgttg accgaagcga tggcctacgg
     2221 catcccggtc gtggccgcgg ggagtggcgg gccgctggaa atcgtgacgg acggcgtgga
     2281 cgggtttctg agagatcccc gagacgtggc ggcggttgga gtcttactgg ctcagctgct
     2341 gcgcgatcct ggtcggcgag cccgggtcgg aagcgctgga cgcgcgacgg tgcttcgccg
     2401 tttcgatccg gatcagtatg tcaggcggat cgcggaggtg tacgacgccg tgctggagcg
     2461 aaacgccggg gtgctttcaa cctcgggcgt tgacggtggt ccattcgggg aacgcccgcc
     2521 ccagtagcca ggtcaaagcc tcgacctgct ctttcgcacg ggggcggatc cgctcgatcg
     2581 cggcagcagt ggtttctcgg tgtggggtca tctcctcggc ggcgagcgac cccgcccatc
     2641 gcctgacggg ccggggcacc atcggcgaaa cgtgggacca caaacgggaa tgggcaagcc
     2701 ggttcaggag cccggaagtc ggtccggagc ttgcgcgact gatgcgcggc ctgagagctt
     2761 tcccgagcct ctgacatgac gctcgaatcc gtccctccgc cgcgacagcg aatccatctg
     2821 gtgatggctg gtcatgtcga tcacgggaaa agcaccgtga tcggacggct gttggttgac
     2881 accaattccc tgccgcaggg caaactggaa cagatccgag agctctgcgc ccgcacggcc
     2941 cggccgttcg agtacgcgtt cctgctcgat gccctgaagg acgagcaggc ccaggggatc
     3001 acgatcgatg ccgcccgggt cttcttcaag acggcgcgcc gcgactacat cattctggac
     3061 gcaccgggac acatcgagtt cctgcgcaac atggtcaccg gcgcggcgca cgccgaggcc
     3121 gccctgctcg tgatcgacgc ggaggaaggc atccgggaga attcgcgccg ccacggctac
     3181 atgatgtccc tgctgggcat cgggcagctc gcggtggtgg tcaacaagat ggacctggtg
     3241 gggtaccgcc gcgaggtatt cgaacgcatc gccgccgatt acggccggtt cctggatgag
     3301 atcggcgtca agccccgggc catccttccc gcctgcgccc gcgagggcga gaacatcgcg
     3361 gcccctggcc cgcacctcgg ttggtacgac ggccccaccg ttctggaggt gctcgagcag
     3421 ttcgagcccg aacgtccgcc ggtcgacaag ccattccgga tgccggtgca ggacgtctac
     3481 aagttcactg aagaaggcga cgaccggcgc atcgtggcgg ggaccatcga atcaggcgga
     3541 gtcgcgccgg gcgatgaggt cgtgttctac ccgtcaggca agaaggcccg ggtcaagtcc
     3601 ctcgaagcct tcaacggccc gccgccggcc cgggccatcg ccggacaggc cgcggggttc
     3661 accctggcgg aacagatcta cgtcgcgcgg ggcgaactcg ccgcgctggc cactgaggtc
     3721 cgtccccatg tcaccactcg cttgctggtg agcctgttct ggctcgggcg cgggcccctc
     3781 gtcaagcgga aggactatct cctcaagctg gggaccgcga aggtactggc ccgggtggaa
     3841 gagatccatc gggtgatcga cgggtccaca ctcgccgccc gcgacgggac ggaccgggtg
     3901 gacctgcacg aggtcgctga gtgcaccctg cagctgcagc gggccctcgc gttcgatgac
     3961 ccggaggtgg cactcgccac cagccggttc gtgctggtgg atgactccga tattcggggt
     4021 ggaggcatcg tgcgcgaggc gctccccgac cgccagacct gggtgcgtga caaggtcctg
     4081 cttcgaaact tcaaatggga ggcgagcttc atcccgggcg agcggcgggc cgagcgctac
     4141 gggcagaagc cggtcctgtt gctcctgacc gggccgcgag cggtcgaccg taaacggctg
     4201 gcgaaggagc tggaagtccg gctcttcaac gacggccggg tggtctactt cctcggcatg
     4261 ggcaatgtgc tctatggggt ggacgctgac ctggagagga ccgggaatcg cgccgagcac
     4321 atgcggcggc tggccgaggt ggccaacatc atgctggacg cgggagtcat cctgctggtg
     4381 agtgcggcgg agctgacggc ggaagacctc gaactgatca gggcgtcggt cggggccgac
     4441 cgggtgtcga ccgtctggct gggcgaccgc gtcaccacgg atttccgggc cgacctggtc
     4501 gtgggggagg acgagcccct ggctgacgcc gtcgagcggc tccggaactt cctgcacgag
     4561 gcgggagtgc tcttccggcc atggtgacgc gcgcgaaccg gaccgagggg ggcaagcgtg
     4621 tttcgtgaaa cccatgcgcg ctcggtcgcc aaggcgctct cctggcgaat cctgggaacc
     4681 atcgcgacct ccctgctggt gttcctcttc acccgacggc tggtgctgtc gctcgccgtc
     4741 ggcgcggtcg agttcgtgtc gaagctcggg ctgttctggt tccacgaacg ggtctgggac
     4801 cggatccggt tcgggaagca gcaggtcgag ccggccgtga tctggttcac cggcctctcg
     4861 ggctctggca agagcaccat cgcggaccgg gtggcccggg agctggctga ccgggggcac
     4921 cgggtggagc gcttggacgg ggacgtggtc cggaacatct ttcccaatac cggctttacg
     4981 cggcccgagc gggaccagca cgtccggcga atcgggttcc tggccagcac gttggagaag
     5041 aacggggtgt tcgtggttgc gtcattcgtg tcgccgtatg aggactcccg ccagttcgtc
     5101 cgggggctct gccgaaactt cctggaagtg tatgtcgcga ccccgctggg ggagtgcgag
     5161 cgtcgggacg tgaagggtct ctacgcccgg gcgcggcgag gggagatcga ccacttcacc
     5221 gggatcagcg atccctacga gccgcccgcg cgacccgagc tggtgatcga caccatgaag
     5281 agctcaccgg agcaggcagg cgagcaggtg ctggccgctc tccgcggcag gaacaacggg
     5341 gtgtgaccgt ggatcatctg gaccggctgg aaacgcaaag cgtacacgtt ctgcgggagg
     5401 cgtatgccaa cttccgcagt ctgtgcctgc tctggtccat cgggaaggac agcacggtcc
     5461 tgttgtggct ttcgcgcaag gcgttcttcg gtcacgtgcc gtacccgctg gtgcacatcg
     5521 atacctcgta caagatcccc gaaatgatcg cctaccggga tcgcctggcg ctggaatgga
     5581 agctgaccat gctcgtgggc cagaaccggg aggcgctcga atcgaagcga accttcccgg
     5641 agggtgcggt ggatcggatc gggtgttgcc ggctgctcaa ga
//
LOCUS       DASWKS010000661         2445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3669213, whole genome shotgun sequence.
ACCESSION   DASWKS010000661 DASWKS010000000
VERSION     DASWKS010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3669213"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..510)
                     /locus_tag="VGA78_18880"
     CDS             complement(49..510)
                     /locus_tag="VGA78_18880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9896004.1"
                     /translation="MRALWYFLHMAGQVAWLGGALAAMAVGAAAKREAPAQMGMAARL
                     QGAIYRGLIGPGALVLVLSGILLTLQMYNRVTAVGLNRWLMAMQGLGILGGLMVLVHT
                     VPTSSKLVRLEPSGPTAAAFHGLHQRLKVSAMISSMIGMLGLLTSALYQTG"
     gene            complement(507..932)
                     /locus_tag="VGA78_18885"
     CDS             complement(507..932)
                     /locus_tag="VGA78_18885"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HEX9896005.1"
                     /translation="MPDPRLFTLDEAERTLPLVRQIVSDIRNEYREWRDAVTRYELEA
                     AGATADSGETDLLRALRERVGSHAERVAVLVEELQALGVELKDFEQGLVDFYALREDR
                     LVYLCWRLGEDHITHWHEVDEGFPGRRPVDAILTRGVVP"
     gene            complement(980..1795)
                     /locus_tag="VGA78_18890"
     CDS             complement(980..1795)
                     /locus_tag="VGA78_18890"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX9896006.1"
                     /translation="MTRPVTMVLSGGGVKAAAHLGAVRALREQGIIPTRFVATSMGAV
                     IAALLAAGLPPEEVFQRLLTVRRHDVARPRPAGLVRGLFSSALLYPEPLQQTIARLVE
                     QTRFEDLALPLTVTAADLDTSELVCFGAGGEDAPLHQALYAACALPIWYPPAVMGGRR
                     LADGGIRSVLPLQVAAQFPADIVVGVDTGPGTDAAPASGRLAPPPLVQMYGEAMHGLM
                     SANTELEVALWRATPGRPPLIYIRPETARGETFAIAEMGRYEQAGYEAARRVL"
     gene            complement(1792..2256)
                     /locus_tag="VGA78_18895"
     CDS             complement(1792..2256)
                     /locus_tag="VGA78_18895"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX9896007.1"
                     /translation="MIPETRSMAYSRGEISTFVMPHMQNVLGDLFGGHLMALVDQAAA
                     VAAIRHAGGPAVTRSIHRLDFHRAIPVGALVTCVATVDYVGRSSMDITVEVFSERVST
                     GEREHTHSAHVVFVAVDQNRHPCQVPRLVPDTPEEQARYDRARKFRAEHGRR"
BASE COUNT          429 a          857 c          801 g          358 t
ORIGIN      
        1 ggtgtcaaat cgctaaagcg tgagatcgct catgcgctga agagtgtgtc agccggtctg
       61 gtagagtgcc gaagtcagca gccccagcat gccgatcatg ctggagatca tggccgacac
      121 cttgagccgc tggtgcaatc cgtgaaacgc cgcggcggtg ggcccgctgg gctccagccg
      181 gaccagcttg ctcgaggtgg gcacggtgtg caccaggacc atcaggccgc ccaggatacc
      241 cagcccctgc atcgccatca gccaccgatt gagtcccacc gcggtgaccc ggttgtacat
      301 ctgaagggtg aggagaatcc ccgagaggac gagcacgagc gcgccgggac cgatcagacc
      361 ccggtagatg gctccctgca accgtgctgc cattcccatc tgggccggtg cctcccgctt
      421 ggccgccgcg cccaccgcca tcgcggccag cgcgccgccc agccaggcca cttgtcccgc
      481 catatgcagg aaataccaga gcgctctcac ggcaccactc cccgggtgag gatggcatcg
      541 accgggcggc ggccggggaa cccttcgtcc acttcgtgcc agtgggtgat atggtcctcc
      601 cccaaccgcc agcagagata taccagccgg tcttcgcgca acgcgtagaa gtccaccaac
      661 ccctgctcga agtccttgag ctccactccc agcgcctgca gctcctccac cagcacggcg
      721 acccgctcgg cgtggctacc gaccctttca cgcagggcgc gcaggaggtc ggtctcgccg
      781 ctgtccgcgg tggccccggc ggcttccagc tcgtaacggg tgaccgcgtc ccgccactcg
      841 cgatactcgt tgcggatgtc ggagacgatc tgtcggacca gcggaagagt tcgctcggcc
      901 tcgtcgaggg taaagagccg gggatcgggc atggagtcac tacagagtaa ggaaacctgg
      961 gcgtaaggca aaggggctgt cacaggactc gacgggccgc ttcgtagccc gcctgttcat
     1021 aacgccccat ctcggcgatg gcaaaggtct cgccccgcgc cgtctcgggc cggatgtaga
     1081 tgaggggcgg ccggcccggg gtagcccgcc acagagccac ctcgagctcg gtgttggcgg
     1141 acatcagtcc gtgcatcgcc tcgccgtaca tctgcaccag gggaggaggc gccagacggc
     1201 ccgacgcggg agccgcatcg gtgccgggcc cggtatcgac ccccaccacg atatcggccg
     1261 ggaattgcgc cgccacctga agcggcagca cggagcgaat cccgccgtcc gccaaccgcc
     1321 gtccgcccat cacggcaggc gggtaccaga tcggcagcgc gcacgcggcg tacagcgcct
     1381 ggtgcaacgg cgcgtcctcc ccgccggcac cgaagcagac cagctcgctg gtatcgagat
     1441 cggcagcggt gaccgtcagc ggcagcgcca gatcctcgaa ccgagtctgc tccaccagcc
     1501 gcgcgatggt ctgctgcagc ggttcgggat agagcagcgc cgagctgaag aggccccgca
     1561 ccagaccggc cgggcggggc cgcgccacat cgtgccgcct cacggtgagc agtcgctgga
     1621 acacctcttc cggaggcaag ccggcggcga gcagggccgc gatcacggcg cccatggagg
     1681 tggcgacgaa ccgggtggga atgatccctt gctcgcgcaa agcccgcacc gcgcccaggt
     1741 gcgcggccgc cttcactccg ccgccactca gcaccatggt gaccggcctg gtcaccggcg
     1801 accatgctcc gcacgaaact ttcgggcccg gtcgtatcgg gcctgctcct cgggcgtgtc
     1861 cgggaccagt cggggcacct ggcaggggtg ccggttctgg tctaccgcga cgaagaccac
     1921 gtgagcgctg tgagtatgct cccgctcacc ggtgctgacc cgctccgaga agacctccac
     1981 cgtgatgtcc atcgaggagc gacccacgta gtcgaccgtg gccacgcagg tcaccagcgc
     2041 gcccaccggg atggcgcggt ggaagtcgag gcgatggata ctccgggtca ccgccgggcc
     2101 gccggcatgc cggatggccg ccaccgccgc cgcctggtcc accagggcca tgagatgccc
     2161 gccgaacaga tcgcccagca cgttctgcat gtggggcatg acaaaggtgc tgatctcgcc
     2221 gcgactgtaa gccatggaac gggtttcagg gatcaatgac gctcctctcg aacagggagc
     2281 agggagcagg gagcaggaag cagggagcag gaaaactgga aggggttgaa gctcactgcc
     2341 gctcccttct ccctgctgcc cgctcccggc tcccggctcc ggtcaatagt cgaccggtcg
     2401 caggtagtac tctccgattg ccgtctggct cagcattgcc acggt
//
LOCUS       DASWKS010000662         5440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3669480, whole genome shotgun sequence.
ACCESSION   DASWKS010000662 DASWKS010000000
VERSION     DASWKS010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5440
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3669480"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /locus_tag="VGA78_18900"
     CDS             complement(<1..1033)
                     /locus_tag="VGA78_18900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9896008.1"
                     /translation="MAFLGHESRVASHETPPPTTLILALQRQQRTTLPGDTPFYAAPN
                     GTLLGTLRSGASVVFGRARGAWRQVTFEGWIFTSSTGPSPRQEFTLSVRADGGENLRN
                     RPDGDRIARAVEGTGFTRLARQGGWTRVRRTAWIHRGGESPANRGSRVAGGDSGRAAR
                     VESRDSSPAPLPPPAVLLAQEPAADRVIIRKGATLSVGPGGAGLGPVPEDMPGEVSGR
                     AGNWVRVRTETWVRAEDLRPAPQEGAVTLERLRTEQDKLVGQSVTWRLQFLAVQRADE
                     LRPELPAGQPYLLTRGPLPEVGFVYVAVSADQMPRFRSMSPLDEFVARGRIRASRTRH
                     LPTPVIELDR"
     gene            1129..2712
                     /gene="gpmI"
                     /locus_tag="VGA78_18905"
     CDS             1129..2712
                     /gene="gpmI"
                     /locus_tag="VGA78_18905"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEX9896009.1"
                     /translation="MSNGFQRQRPVALVVLDGWGYRAERDGNAIELGNTPVWHDLFSR
                     NPRTLLDASGLAVGLPRGQMGNSEVGHLNLGAGRVVPQDLVRISQSIPNGDFFRIEPL
                     VSLCQHVRRSSGTLHLMGLLGFGGVHALDRHLLAAVELGLRQGVPRIAIHGFLDGRDS
                     PPQSGLEVVRKLQQDLAKLVATVSQPSASPPARLATLSGRYYAMDRDKRWDRTRLAYD
                     AIVQGRAPNTADDPVRAVDAAYARGETDEFIKPIVIRSGEAPLAPVRDGDGIFYVNFR
                     SDRMRQLVRAISIEGFDGFEAGRQPATQAVTMTQYDQTFPLPQAFPPFTLDRILAEVL
                     ADRSLTQFRTAETEKYPHVTYFFNGGVEPPFRCEERLLVPSPRVATYDLMPEMSAVEV
                     TDGLCHALEAAEHDFLLCNFANADMVGHTGVVPAILRAVETVDRCLGRVVSSAAVSGT
                     RLLITADHGNCELMIDPDTGGPHTAHTTNPVPLLAIGTDITSLRSGGALCDVAPTILE
                     LMGLEQPDQMTGKSLSERD"
     gene            2721..3410
                     /locus_tag="VGA78_18910"
     CDS             2721..3410
                     /locus_tag="VGA78_18910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9896010.1"
                     /translation="MKPSRHRPLLHLAALIGTLGTAAPGAAQVGHDPATSPYRDIRRS
                     TFLVLSGGRFLGSGGAVGVAPHGGNVYGLRMSFLANRTIQLSAGGFYGMLSRSIYDPA
                     EPADERIVGTTDTDVLWIDAAIHFNLTGGKTWHRLAPFAGAAAGLAFSENLPDDPASF
                     KMGTKFFLAPVLGVRFFLGQRLALQAESRFNFWQIKYTTAFVQEAIESSEWSVSPWLN
                     LGLAWAFDWPF"
     gene            3421..3831
                     /locus_tag="VGA78_18915"
     CDS             3421..3831
                     /locus_tag="VGA78_18915"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX9896011.1"
                     /translation="MRVSLTRRVGFHATHFLRLPELSEAENRARFGSTVDPHSHDYTC
                     DVTVNGTMVRGMVMDVSRLDEVLAERVVDPLDGSSLNQAIPVCARQEALPTCETVAAW
                     CWNELAPALPSGVDLERVRVAEDATLHAECTGTL"
     gene            3863..4606
                     /locus_tag="VGA78_18920"
     CDS             3863..4606
                     /locus_tag="VGA78_18920"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEX9896012.1"
                     /translation="MSEDAAVEETPVWLEVNRVPLVTWMCTPDLLEELALGWLYGEGY
                     IGSVDDVRLRPCSTDLGFWATIPEPQFEAVRAEARRPVLASGCGAVATYLADVNAAPV
                     TARPPARLPALDELRLLFKALFQQGQRYRETGGIHAAALTDGTDLLAHAEDIGRHNAV
                     DKVIGTLVLNRRPIVGLGLMVTGRISAELAFKAARAGISWVATPSVPSTLALEIASRN
                     RMVLVGRAVSGAPHIHQPPAGPSDRPSAS"
     gene            4603..5196
                     /locus_tag="VGA78_18925"
     CDS             4603..5196
                     /locus_tag="VGA78_18925"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEX9896013.1"
                     /translation="MNGAIIAGGEATRFAGKPKGLERVAGARILDRLVRTFEDALGAP
                     PLLVANALDAAHWKPGLRVVPDLIPGLGALGGLYTAVRRAPAPVVCVAWDMPFVTSDL
                     LAALAHGLDQADACLPESGGRRGVEPLCAAYGPACGDAIEQVRQSGDHRAIAFHHLVR
                     VGILNDQIVSTFGDPAVLFFNVNTAEDLQRAEELART"
     gene            5193..>5440
                     /locus_tag="VGA78_18930"
     CDS             5193..>5440
                     /locus_tag="VGA78_18930"
                     /inference="COORDINATES: protein motif:HMM:NF015181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobB"
                     /protein_id="HEX9896014.1"
                     /translation="MRMLSIIGHKNAGKTTLLVALAREYHRQGRRVGTIKHASHPALV
                     DREGTDTWRHFHEGSSERTLIAAPDMRVLFERAPDDTEP"
BASE COUNT          863 a         1888 c         1814 g          875 t
ORIGIN      
        1 accggtcgag ttcgatcacc ggggtcggga gatgcctggt cctcgaggcg cggatccgtc
       61 cccgagccac gaattcatcg agcgggctca tcgagcggaa gcgcggcatc tgatcggcgc
      121 tgactgccac gtacacgaac ccgacctcgg gtagtgggcc ccgggtgagg agatagggct
      181 gccccgccgg cagctcgggc ctcagctcgt cggcccgttg gaccgcgagg aactgcagcc
      241 gccaggtgac cgactgcccc accagcttgt cctgctcggt gcgcaaccgc tccaacgtga
      301 ccgcgccctc ctggggtgcg ggacgcaggt cctcggcccg gacccaggtc tccgtccgca
      361 ccctcaccca gttgccggcc cgcccggaaa cctctcccgg catatcctcc ggcaccggcc
      421 ccaatccggc tccgcctggt ccgactgaaa gcgtcgcgcc cttccggatg atcacccggt
      481 cggcggcggg ttcctgggcc agcaggaccg cgggaggcgg cagcggcgcc gggctggaat
      541 cgcggctctc gacccgggcg gcgcgaccgc tatccccacc agcgacccgc gacccgcgat
      601 tggctgggga ctcaccgcct cggtggatcc aggccgttcg ccgcacccgg gtccaaccac
      661 cctggcgagc caaccgggtg aatccggttc cctccaccgc ccgggcgatc cggtcgccat
      721 cgggccgatt gcgcaggttc tctcctccgt cagcccgcac cgacagggtg aattcctgtc
      781 ggggagaggg gccggtggat gacgtgaaga tccagccttc gaacgtgacc tggcgccagg
      841 caccacgggc tcggccgaac accaccgacg cccccgatcg caacgtgccg agcagcgtcc
      901 cattcggcgc ggcatagaac ggggtatcgc ctgggagcgt ggtacgctgc tgtctttgca
      961 gggccagaat caacgtcgtg ggtggcggag tctcgtgact ggcgactcgt gactcgtgac
     1021 ccaagaaggc caccaggacc agcccggtaa cggctggtag ccgaccccgt ggagggctag
     1081 attgcggcgc gatcgtcact tccggcattg tagaacgcgc ggagaggcat gtcaaacgga
     1141 ttccagcgcc agcgccccgt ggcgttggtg gtcctcgatg gctggggcta tcgagccgag
     1201 cgggatggca atgcaatcga gctcgggaat acgccggtct ggcatgactt gttcagccgg
     1261 aacccgcgca cgctgctcga cgccagtggg ctggcggtgg gactcccccg gggacaaatg
     1321 gggaacagcg aagtagggca cctgaacctc ggcgccggcc gggtggtgcc ccaggatctg
     1381 gtccgtattt ctcagagcat tccgaacggc gatttcttcc ggatcgaacc gctggtgtcg
     1441 ctgtgccaac acgtgaggcg aagtagcggt accctccacc tgatggggct gctcgggttc
     1501 ggcggggtac acgcgctcga ccggcacctg ctggcggccg tggagctcgg cctccggcag
     1561 ggtgtgccac gcatcgcgat ccacgggttc ctggatgggc gcgattcgcc tcctcagtcc
     1621 gggctggaag tcgttcggaa gctccagcag gacctggcga agctggttgc cacggtaagc
     1681 caaccgtccg ccagcccgcc ggcccgcctg gccaccttat ccggccgcta ctacgccatg
     1741 gatcgcgaca agcgctggga tcgcacccgg ctggcctacg acgcaatcgt gcagggccgg
     1801 gctcccaaca ccgccgatga tccggttcgg gccgtcgacg ccgcctacgc ccggggcgaa
     1861 accgacgagt tcatcaagcc cattgtcatt cggagcggcg aggcgccgtt ggctccggtg
     1921 cgggacggtg acggaatctt ctacgtgaac ttccgcagcg accggatgcg gcagctggtg
     1981 cgggccatct ccatcgaggg gttcgatggc ttcgaggccg ggcgtcagcc ggcgacccag
     2041 gccgtcacca tgacgcagta cgatcagacc ttcccgctgc cccaggcttt cccccccttc
     2101 acgctcgacc ggattctggc cgaggtcctg gccgaccggt cattgaccca gtttcgcacc
     2161 gcggaaacgg agaagtaccc ccacgtgacc tacttcttca acggcggtgt ggagccgccg
     2221 ttccggtgcg aggaacggct gctggtaccg tctcccaggg tcgccacgta cgacctgatg
     2281 cccgaaatga gcgcggtaga ggtcaccgac ggtctctgcc acgccctgga ggcggcggag
     2341 cacgactttc tgctctgcaa cttcgccaac gccgacatgg tggggcacac cggggtggtg
     2401 ccggcgatcc tccgggcggt ggaaacggtc gaccgctgcc tgggccgggt cgtcagcagc
     2461 gccgcggtgt cgggcacccg gctgctgatc acggcggatc acggtaactg cgaactcatg
     2521 atcgatcccg acaccggcgg accccacacc gcccacacaa ccaatccggt accgctcctg
     2581 gccatcggga ccgacatcac cagccttcgt tccggcggag ccctctgcga cgtggctccc
     2641 acgatcctgg agctgatggg actggagcag cccgaccaga tgaccggtaa gagcctgagc
     2701 gagagagatt gacgaacagc atgaagccgt cccgccaccg tccactcctg cacctggccg
     2761 ccctgatcgg caccctgggc accgcggcac ccggggccgc ccaggtcggt cacgatcccg
     2821 ccacgtcgcc ctaccgcgac atccggcgat ccaccttcct ggtactttcc ggaggccggt
     2881 ttctggggag tggtggagct gtcggcgtgg cgccacatgg tggcaacgtc tatggactgc
     2941 ggatgtcgtt tctggccaac cgtaccatcc agttgagcgc cggcgggttc tacgggatgc
     3001 tctcgcgcag catctacgat ccggcggaac cggccgatga gcggattgtg gggacaaccg
     3061 ataccgatgt gctctggatc gacgcggcca tccatttcaa cctgaccggc ggcaagacct
     3121 ggcaccgcct ggcacctttt gcgggcgcgg ccgccggcct ggcgttcagc gagaacctcc
     3181 ccgacgaccc ggcaagcttc aagatgggaa ccaagttctt cctggcccct gtgctcggcg
     3241 tacgattctt cctggggcag cggctcgcgc tccaggccga gagccggttc aacttctggc
     3301 agatcaagta caccacggcg ttcgtccagg aggcgatcga gagcagcgag tggtcggtaa
     3361 gcccctggct gaacctcggc ctggcctggg ccttcgactg gccgttctga tggtggcgtc
     3421 atgagagtat cgctcacccg tcgggtcggt ttccacgcca cccacttcct tcgcctgccg
     3481 gagctgagcg aggcagaaaa ccgggctcgc ttcggatcca ccgtggaccc gcattcccac
     3541 gactacacct gcgacgtgac ggtgaacgga accatggtgc gaggcatggt gatggatgtc
     3601 tcccggctgg atgaggtgct cgccgagcgg gtggtggatc cgctggatgg cagttccctc
     3661 aaccaggcca ttccggtttg cgcccggcag gaagccctcc ccacctgcga aacggtggcc
     3721 gcctggtgct ggaacgagct ggcgcccgca ctcccctccg gagtggatct cgagcgggtc
     3781 cgggtagccg aggatgccac gcttcatgcc gagtgcaccg gaaccctctg agctgagaca
     3841 gccggccaag cgcggcggcc ggatgagcga ggacgccgcg gtcgaagaga ccccggtgtg
     3901 gctcgaggtg aaccgggtgc ccctggtcac ctggatgtgc actcccgatc tgctggagga
     3961 gctggcgctg ggatggctct atggcgaagg gtatatcggc agcgtggacg acgtgcggct
     4021 gcgtccctgc tccacagacc tgggcttctg ggccaccatt ccggaaccac agtttgaagc
     4081 ggtgcgagcc gaagcccggc ggccggttct ggcctccggc tgcggcgccg tcgccaccta
     4141 tctggctgat gtgaatgccg ccccggtgac ggcccgcccg cccgcccggc tgcccgccct
     4201 ggacgagttg cggctgctct tcaaggccct gttccagcag ggccaacgtt accgcgagac
     4261 cggcgggatc cacgcggccg ccctgaccga tgggaccgac ctcctggccc acgccgaaga
     4321 catcgggcgc cacaatgcgg tggacaaagt gatcggcacc ctggtgttga accgaaggcc
     4381 gatcgtgggg ctggggctga tggtcacggg acggatctcc gccgagctgg ccttcaaggc
     4441 cgcccgcgcc ggcatcagct gggtcgccac gccgtcggta ccatcgaccc tcgccctcga
     4501 gattgcttcc cgcaaccgga tggttctggt cgggcgcgcc gtgagcggtg ccccccatat
     4561 ccaccagccg cccgctggtc cgtcggaccg tccgtccgcc tcgtgaacgg cgccatcatc
     4621 gccggcggcg aggccacccg cttcgcaggc aagccgaagg ggctggagcg ggtagccggc
     4681 gcgcggatcc tcgaccggct ggtccggacc ttcgaggatg ccctgggcgc gccgccgttg
     4741 ctggtggcga acgcgctcga tgccgcccat tggaaacccg ggctccgggt ggtccccgat
     4801 ctgatacccg ggctgggcgc gctgggcgga ctctacaccg cggtgcgacg ggcgccggca
     4861 ccggtggttt gtgtcgcctg ggatatgccg ttcgttacct ccgaccttct ggcggccctg
     4921 gcacacgggc tcgaccaggc cgatgcctgc ctgccggaga gcggcggccg gcgcggggtg
     4981 gaaccgctct gtgccgccta tgggccggcc tgcggcgacg ccatcgaaca ggtccggcag
     5041 agcggcgacc accgggcgat cgccttccac cacctcgtgc gggtgggtat cctcaatgac
     5101 cagatcgtca gcacctttgg tgatcccgcc gtcctgttct tcaacgtgaa taccgcagaa
     5161 gacctccagc gcgcggagga gttggcccgt acatgaggat gctctccatc atcggccaca
     5221 agaacgccgg gaagaccacc ctcctggtgg cactggcacg cgagtatcac cggcagggcc
     5281 gccgggtcgg caccatcaag cacgcttccc atccggcgct ggtcgaccgc gaagggaccg
     5341 acacctggcg tcacttccac gagggatcgt ccgaacgcac cctgatcgcg gcgcccgaca
     5401 tgcgagtgct gttcgagcgg gcccccgatg acaccgaacc
//
LOCUS       DASWKS010000663         7380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3687182, whole genome shotgun sequence.
ACCESSION   DASWKS010000663 DASWKS010000000
VERSION     DASWKS010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7380
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3687182"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VGA78_18935"
     CDS             complement(<1..268)
                     /locus_tag="VGA78_18935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+:solute symporter"
                     /protein_id="HEX9896015.1"
                     /translation="MQLNALDWAMVALYGLLTVAIGLAVSRRAGSGTQEFFLSGRSLP
                     WWLLGVSLVATTFSTDTPNLVTDLVRTGGVSQNWAWWAFCLTGMA"
     gene            complement(370..1230)
                     /locus_tag="VGA78_18940"
     CDS             complement(370..1230)
                     /locus_tag="VGA78_18940"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEX9896016.1"
                     /translation="MNRPGWTLVVLAAGLGRRFGGAKQLVSVGPAGELLSDYTLYDAL
                     AAGASRAVYVVTPGLEPELRRHHERWRDRIEIRYARQQSNNLPPGRAKPWGTTEAVLV
                     TRDQVNGSCVVVNADDFYGPEAIAAAATTLSARPPARQPAAAAIAFRLGETLSPSGPV
                     SRAVLEVDAGGWLRTITERSDLTDASGLAPDQAVSMNCWAFGPRIFPLLQQDFSRFLA
                     THGRSPIAECALPETIGRLISAGALRVQVVSAGRGWLGMTHRDDLSVVRAALAGLVDK
                     GVYSSPLPGP"
     gene            complement(1227..1649)
                     /locus_tag="VGA78_18945"
     CDS             complement(1227..1649)
                     /locus_tag="VGA78_18945"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX9896017.1"
                     /translation="MLAVLLALAGPAADTCRFDLPLTVRRNPDAFIMAAPLLTREAVD
                     SVGLYTGWLFLGPGVVVPEHDHGEDEEMLMVVCGSARFRIGDKEEALVPGSSMRIPRH
                     ARHAAIAGPSGMVAVQIYRGGTPGLRFYNWEALPPTGR"
     gene            complement(1652..2266)
                     /locus_tag="VGA78_18950"
     CDS             complement(1652..2266)
                     /locus_tag="VGA78_18950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9896018.1"
                     /translation="MTDRRTFLASLAATPAVAAVAGDLALAARDARLTTEPWDLRWLD
                     ELNGTYRQVFDCSELSNEPLRVVSNYFRAFKEVLGLEHPTVNAIVAIASRSFPINASD
                     ALWARYGIAETWKIPAGADGKPPTRNIFAAEAADLKAKGAFFWQCNNALNRITERFAT
                     ESGRPLAEVRAEVVAGLLPGVKIVPAHTMFLGLVQHRGCAYEKL"
     gene            complement(2290..2781)
                     /locus_tag="VGA78_18955"
     CDS             complement(2290..2781)
                     /locus_tag="VGA78_18955"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX9896019.1"
                     /translation="MSPLLLFKNLLFTVLVPGTFGVYLPMVIAGRTGARAAGVGPFWL
                     LGLVLLATGSLIYMVCIVEFATRGRGTPAPIDPPRTLVVTGLYRYVRNPMYLGVLSVV
                     LGWAALTRSPALLLYAAALWTMFQLVIILYEEPTLRRLFGEAYQRYCHQVGRWIPGKG
                     LAQ"
     gene            complement(2778..3263)
                     /locus_tag="VGA78_18960"
     CDS             complement(2778..3263)
                     /locus_tag="VGA78_18960"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9896020.1"
                     /translation="MTLEVLRRLFAHLRWADRQVLEALGHAPGTHAGRALALYAHVLG
                     AEHVWLARLQQEPATVAVWPAFTLAECAVLAEQTHAALDGYLAHLSEAALTDEVGYVN
                     SAGQSFRSSVEDILLHVALHGSYHRGQVALLVRDGGGTPAPTDFIGFVRGAPAATRVD
                     R"
     gene            complement(3260..3757)
                     /locus_tag="VGA78_18965"
     CDS             complement(3260..3757)
                     /locus_tag="VGA78_18965"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX9896021.1"
                     /translation="MSEVADLRRMILRELQTFKQEVQLFPDSAMLWTTLPGVTNSAGN
                     LALHAAGNLRHFVGAVLGKTGYVRNRDAEFKSRDLDRVTVLAELDAAIAEVGATFERL
                     DPAALALPYPQPVGGITVTTGRFLIHLAVHLGFHLGQAGYLRRMATGQNTSAGPVAVT
                     ALAEP"
     gene            complement(3754..4401)
                     /locus_tag="VGA78_18970"
     CDS             complement(3754..4401)
                     /locus_tag="VGA78_18970"
                     /inference="COORDINATES: protein motif:HMM:NF019559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HEX9896022.1"
                     /translation="MRVIDLTALILAAVAVLVDATAPAWANWITRPLAILVILVVAVA
                     GVPGSYRTLIMAGLACSVIGDILPLLSEGNFPASLGVFLAVHLCYIGAFWPGVGLRGA
                     WIARLVYVTLGVAMVAALWPVLGPLLRVAIAVYAALIVMMAGQAAGRWAVLKTPGARS
                     AAVGAVVFLVSDGLLALDRFRAQFPGARIAVLGTYYLAQWLIARSTAEPSPEPVT"
     gene            complement(4398..5975)
                     /locus_tag="VGA78_18975"
     CDS             complement(4398..5975)
                     /locus_tag="VGA78_18975"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX9896023.1"
                     /translation="MSRPSTGFGRSMVFAGLLASAPAIGAAQAPPGLDQFVTQVMGSF
                     EVPGLSLAIVKDGKVIVAKGYGVRKLGDAAPVDQATRFGIASNTKLFTAAALALLVEE
                     GKLEWDAPVVHYLPGFALSDPFVTRELSIRDLLVHRSGLGLGAGDLLWWPPSTYHRKE
                     ITRRLRYIPLATSFRTAYAYDNVLYGVAGDVIEAVAGQSWEDFMTERILRRVGMAGSH
                     VWNSRSAAGPNDAWPHARVEGTVRPIPPFRSDNVNPAGGINAGAEDMARWMIVQLDSG
                     RVAGGRLFSQRSARELWTIVTPIPAGEPAAELAPLRAEFNGYALGVGVRDYRGVKVLS
                     HTGGLPGFLSRVAMIPARKVGVAVLTNAESGSAFNAIVQWVLDYYLEVRPAHDWLSAF
                     RSVQAREDSALAATVRSAAAQRNSASRPSLPLERYAGTYRDVWYGDVIIEHQGGGLSI
                     RFCCSPDLVGTLEHWQYDSFVARWRDRALRADAYVTFALHADGSIDQVKMTPFTPDVD
                     FSFDFQDLLLRPVRGTR"
     gene            complement(5972..6163)
                     /locus_tag="VGA78_18980"
     CDS             complement(5972..6163)
                     /locus_tag="VGA78_18980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9896024.1"
                     /translation="MIQKLLALALFGSDGFIQDLEIDLPANPEWNTFKLRLLRRENLT
                     RSAWEAFQKARFGTGGAPR"
     gene            complement(6160..7191)
                     /locus_tag="VGA78_18985"
     CDS             complement(6160..7191)
                     /locus_tag="VGA78_18985"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEX9896025.1"
                     /translation="MPELAEVRPGEELPVDALAAWLSRRLAGAQQIEVRQFPSGHSNL
                     TYLIRTRTPAAEYVLRRPPLGPVAPKAHDMLREYGVLQAVHPHFPLAPRPIVVCEDPS
                     VIGAPFFVMERRRGVIARRGVPAEFAGVSDAPDRISRGLIDNLADLHAIDVRATGIVS
                     LGKPEGFLERQVTGWTQRWRAALTEPVPAMEPVLEWLAARPPEPARATVVHQDYKLDN
                     VMLDLRNPGRLTAVLDWEMATIGDPLADLGLTLTYWALPEARAVSGMDESAGWWSREA
                     MVERYRERTGFDVSGLRWYEVLGTFKLAVIVQQIYARYIRGQTSDDRFQRMGQMAIAL
                     AEQGRAMLP"
     gene            complement(7191..>7380)
                     /locus_tag="VGA78_18990"
     CDS             complement(7191..>7380)
                     /locus_tag="VGA78_18990"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX9896026.1"
                     /translation="VAPPMALAVIDRAIQIHGAAGVSQDTFLARAWSMARTLRIADGP
                     DEVHLETVARLELVRPNG"
BASE COUNT         1321 a         2491 c         2525 g         1043 t
ORIGIN      
        1 tggccatgcc ggtaaggcag aaggcccacc aggcccagtt ctggctgact ccgccggtgc
       61 gaaccaggtc ggtgaccagg ttcggggtat cggtagagaa agtggtggcg accagtgaaa
      121 ccccgagcag ccaccagggc agggagcggc ccgagaggaa gaactcctgg gttcccgagc
      181 cggcgcgacg actgacggcg agaccgattg ccacggtaag gaggccgtac agcgccacca
      241 tcgcccagtc gagggcgttg agctgcatga cgggcccggg taaaggacgc cggaatctgg
      301 cccgatgctg ctcgctaagg aagccgatcg acggaccgac ggaccgacgg accgacggac
      361 agtcggggct cagggtccgg ggagggggga ggaatagact cccttgtcaa ccagaccggc
      421 cagcgcggcg cggaccaccg agaggtcgtc tcggtgggtc atgcctaacc agccccggcc
      481 cgcgctcact acctggaccc gcagcgcacc cgccgagatc agccggccaa tcgtctccgg
      541 caaagcacac tcggcgattg gcgacctgcc gtgggtggcg aggaaccggg agaagtcctg
      601 ctggagcagc gggaagatcc ggggaccaaa ggcccagcag ttcatcgaga cggcctggtc
      661 gggcgcgagc ccgctcgcat cggtcaggtc ggagcgctcg gtgatggtcc ggagccaacc
      721 cccggcgtcg acttcgagca cggcgcgcga gacggggccg ctcggggaga gggtctcgcc
      781 caggcgaaag gcgatggctg cggcggcggg ctggcgggcg ggcggcctgg cggacagtgt
      841 ggtcgcggcg gcggcgatcg cttccgggcc gtagaaatcg tcggcgttga ccactacgca
      901 gcttccgttc acttgatccc gggtcaccag cacggcctcg gtggtgcccc agggcttggc
      961 gcgaccgggc gggagattgt tgctctgctg ccgggcatac cggatctcga tccggtcacg
     1021 ccagcgctca tggtgccgcc ggagctcggg ttccaacccg ggcgtcacga catacacggc
     1081 gcgagaggcg ccggcggcca aggcgtcata caaggtgtaa tcgctgagca gctcgccggc
     1141 gggaccgacg gagacaagct gcttggcgcc gccgaagcgg cggcccagac cggccgccag
     1201 gacgacgagg gtccagcccg gacggttcac cgtccggtgg gaggcagtgc ttcccagttg
     1261 tagaaacgga gaccgggcgt gccaccgcga tagatctgaa ccgccaccat cccgctgggc
     1321 ccggcgatgg cggcatgccg ggcgtgccgg gggatacgca tcgacgaacc gggcaccagc
     1381 gcctcctctt tgtcgccgat ccggaaccgg gccgatccac aaaccaccat cagcatctcc
     1441 tcgtcctcgc cgtgatcgtg ttccggaacc accacaccgg gaccgaggaa gagccagccg
     1501 gtgtacaggc ccaccgaatc gaccgcctca cgggtcagca gcggcgcggc catgatgaat
     1561 gcatcgggat tgcggcgcac cgtgagggga aggtcgaagc ggcaggtgtc ggcggcggga
     1621 ccggccaggg ccaggagcac ggccagcatg gtcagagctt ctcgtacgca caaccgcggt
     1681 gctgcaccag gccgaggaac atggtatgcg ccgggacgat cttcaccccc ggcagcagtc
     1741 cggcgacaac ctcggcccgt acctcggcca gcggccggcc gctctcagtg gcgaaccgct
     1801 cggtgatacg gttgagcgcg ttgttgcact gccagaagaa ggcccccttg gccttgagat
     1861 cggcggcctc ggcggcaaag atgttgcgcg tgggcggctt cccgtcagcc ccggccggga
     1921 tcttccacgt ctccgcgata ccgtacctgg cccacagcgc gtcggacgcg ttgatgggaa
     1981 aactgcgact tgcgatggcg acgatcgcgt tcaccgtcgg gtgttccagt cccaggacct
     2041 ccttgaaggc gcggaagtag ttggacacga cccggagcgg ttcgttgctc aactcgctgc
     2101 agtcgaacac ctgccggtag gttccgttga gctcatcgag ccagcgaaga tcccaaggct
     2161 cagtcgtaag ccgcgcatca cgagccgcga gggccaggtc ccccgcgacg gccgcaaccg
     2221 ccggtgtcgc ggccagactg gcgagaaaag tgcggcgatc ggtcatgggc gtacccccct
     2281 ggaagaacgt cattgggcga gccccttgcc ggggatccac cgcccgacct ggtgacaata
     2341 ccgctggtag gcctcgccga agaggcgccg caaggtgggt tcttcgtaca ggatgatgac
     2401 cagctggaac atggtccaca acgccgccgc gtagagcagc agcgccggcg accgggtcaa
     2461 ggcggcccag cccagcacca cgctcaagac tcccaggtac atcgggttgc ggacgtagcg
     2521 atagagcccg gtgaccacca gggtgcgggg cggatcgatc ggcgccgggg tgccgcggcc
     2581 ccgggtggcg aattccacga tgcagaccat gtagatcagc gaccccgtgg ccagcaggac
     2641 cagccccagc agccagaagg gtccgacgcc ggcggcacgc gcaccggttc gtccggcgat
     2701 gaccatgggc agatacaccc cgaaggtgcc ggggaccagc acggtaaaga gcagattctt
     2761 gaacagcagc aggggactca tcgatcgacc cgggtcgcgg ccggtgcccc gcggacgaac
     2821 ccgatgaaat cggtcggtgc cggggtcccg ccgccgtccc gcaccaggag cgccacctgg
     2881 ccccggtggt aactcccgtg cagcgcgacg tgcagcagga tgtcttccac gctggaacga
     2941 aaactctggc ctgcgctgtt gacgtacccg acctcatcgg tcagggcagc ttcactgaga
     3001 tgcgccaggt agccatccag cgcggcgtgg gtctgctccg ccagcacggc acattcggcc
     3061 agggtgaatg cgggccagac cgccaccgtg gccggttcct gctggagtcg agccagccac
     3121 acatgttccg cccccaggac atgggcatag agcgccagcg cccgaccagc gtgggttccc
     3181 ggagcgtgcc ccagcgcttc gagcacctgc cgatcggccc accgcaagtg cgcgaacagg
     3241 cgccggagga cttccagcgt catggttcgg ccagggccgt gaccgcgacc gggccggccg
     3301 acgtgttctg tccggtcgcc atccggcgga gataccccgc ctgacccaga tgaaatccca
     3361 ggtgcacggc caggtgaatg agaaaacgcc cggtcgtaac ggtgatgccg ccgaccggct
     3421 gaggatacgg cagcgccagc gccgcggggt ccagtcgctc gaacgtggcg ccgacctcgg
     3481 ctatggcggc gtcgagctcc gccagcaccg tgacccgatc gagatctcgg gatttgaatt
     3541 cggcgtcccg gtttctcaca taaccggtct tgccgagcac cgcgcccacg aagtggcgca
     3601 ggttgccggc cgcgtgcaac gccagattgc ccgcggaatt ggtcacgccg ggcagggtgg
     3661 tccacagcat cgcgctgtcg ggaaagagct ggacctcctg cttgaaggtc tgcagctctc
     3721 tcaggatcat ccggcgcagg tcggcgacct cgctcatgtc acaggctccg gtgagggttc
     3781 cgcggtcgag cgcgcgatca gccattgcgc gaggtagtag gtccccagca cggcgatgcg
     3841 ggctcccggg aattgggccc ggaagcggtc cagcgccaac aagccatcgg acaccagaaa
     3901 gacaaccgcg ccgacggcgg cgctccgggc tcccggggtc ttgagcacgg cccagcgccc
     3961 ggccgcctgt cccgccatca tgacgatgag ggcggcgtac accgcgatcg cgacgcgaag
     4021 cagaggcccc agcaccggcc agagcgccgc gaccatggcc acaccgagcg tcacatagac
     4081 gagacgcgcg atccaggccc cgcgcaaccc gacccccggc cagaaggctc cgatgtagca
     4141 caggtggacg gccaggaaga cgcccaggct cgcgggaaag ttgccttccg agaggagcgg
     4201 gaggatgtca ccgatcaccg agcaggccag tcccgccatg atgagggtgc gataggagcc
     4261 agggaccccg gccacggcca ccaccagaat cacgagaatg gcgagcggcc tggtgatcca
     4321 gttggcccag gcgggagcgg tcgcgtccac cagcaccgcc accgccgcga ggatgagcgc
     4381 ggtgaggtcg atgactctca tcgggttcct cgtaccggcc ggagcagcag gtcctggaaa
     4441 tcgaagctga agtccacgtc gggagtgaac ggggtcatct tcacctgatc gatactgccg
     4501 tcggcgtgga gggcaaaggt cacgtaggcg tccgcccgga gggcccgatc ccgccaccgg
     4561 gcgacgaagc tgtcgtactg ccagtgctcc agcgttccga ccaggtcggg cgagcagcag
     4621 aagcggatgc tcaaaccgcc gccctggtgt tcgatgatca cgtcgccgta ccacacgtcc
     4681 cgataggtcc cggcataacg ctccaacggc agcgagggac ggctggcgct attgcgttgg
     4741 gccgccgcgg atcgcaccgt ggcggcgaga gcggagtcct cccgcgcctg cacgctgcgg
     4801 aaggccgaga gccagtcgtg ggccgggcgc acctccaggt aatagtcgag cacccactga
     4861 acgatggcat tgaaggcgga ccccgactcg gcattggtga gcaccgccac tccgactttc
     4921 cgcgcaggga tcatcgcgac ccgggaaaga aagccgggaa ggccgccggt gtgcgacagc
     4981 actttgacgc cgcggtagtc ccggactccg acgccgagcg cgtagccgtt gaactccgcc
     5041 cggagcggcg ccagctccgc cgccggttcg ccggccggaa tcggcgtgac gatggtccag
     5101 agctcgcgcg cggatcgctg cgaaaacagc cggccgccgg ccacccggcc ggaatcgagc
     5161 tgcacgatca tccaccgcgc catgtcctcg gcgccggcgt tgatgcctcc ggcggggttg
     5221 acgttatcgc tccggaaggg cgggatgggc cgcacggttc cttcgacccg ggcgtggggc
     5281 caggcgtcgt tgggtccggc ggcgctccgg gaattccaga cgtgactccc ggccatgcct
     5341 acccggcgga gaatccgctc ggtcatgaag tcttcccagg actggccggc gaccgcctcg
     5401 atcacgtcgc cggccacgcc gtacaacacg ttgtcgtagg cgtacgcggt gcggaagctg
     5461 gtggccaacg ggatgtaccg aagccgccga gtgatctcct tgcgatggta ggtggaaggc
     5521 ggccaccaca ggaggtcccc cgctcccagg ccaagaccgc tgcgatgcac cagcagatcc
     5581 cggatgctga gctcccgggt aacgaacgga tccgagaggg caaagccggg gagatagtga
     5641 actaccggcg catcccattc cagcttgccc tcttcgacca gcaaggccag cgcggcggcg
     5701 gtgaaaagct tggtgttgga cgcgatcccg aagcgagtcg cctgatcgac cggcgccgca
     5761 tcacccagct tcctgacgcc gtatcctttg gccacgatca ccttgccgtc cttgacgatg
     5821 gccaacgaca ggccgggcac ctcgaagctc cccatcacct gggtcacgaa ctgatccagc
     5881 ccgggcggcg cctgggcggc tccgatcgcc ggggccgagg ccaggagacc cgcgaacacc
     5941 atgctacgac cgaagccggt cgatggtcgg ctcatcgagg tgctccaccg gtcccgaacc
     6001 gggctttctg aaatgcttcc catgcggagc gggtcaggtt ctcgcggcgc agcagacgca
     6061 gcttgaaggt gttccattcc gggttggcgg gcaaatcgat ctccagatcc tggatgaatc
     6121 cgtcgcttcc gaacagagca agggcgagga gtttctggat catgggagca ttgcccggcc
     6181 ttgttccgcc agcgctatgg ccatctggcc catcctctgg aaacggtcat cgctggtctg
     6241 gcccctgata taccgggcgt agatctgttg cacgatgacg gccaacttga aggtgcccag
     6301 cacttcatac cagcggagcc cgctcacgtc gaagccggtg cgctcgcggt accgctcgac
     6361 catggcttcc cggctccacc atccggccga ctcatccatc cccgacacag cccgggcctc
     6421 cggcagcgcc cagtaggtca gggtgagccc gagatcggcc aggggatcac cgatggtcgc
     6481 catttcccaa tcgagcaccg cggtgagacg gccggggttc cgcagatcca gcatcacgtt
     6541 gtcgagcttg tagtcctgat gcaccaccgt ggcccgggcc ggctcgggcg gtcgggccgc
     6601 cagccactcg agcaccggct ccatcgcggg tacgggctcg gtgagcgcag cgcgccagcg
     6661 ctgggtccag ccggtcacct gtcgttccag aaacccctcg ggcttgccca gcgacacgat
     6721 accggtggcg cgcacatcga tggcgtggag atccgccagg ttgtcgatca atccccgact
     6781 gatacggtcg ggagcatcgg acacacccgc gaactcggcg ggaactcctc gccgggcgat
     6841 cacgccgcgg cggcgctcca tgacgaagaa gggcgccccg atgaccgacg ggtcctcaca
     6901 cactacgatc gggcggggcg ccaatggaaa atggggatgc accgcctgca gcacgccgta
     6961 ctcccgcagc atgtcgtggg ctttgggcgc caccggaccg aggggcggcc ggcgcaggac
     7021 gtactcggcg gccggagtgc gagtgcgaat gagataggtg aggttcgaat gcccggacgg
     7081 gaactgccgc acttcgatct gctgggctcc cgccagtctc cggctgagcc aggctgccaa
     7141 cgcatcgacc ggcagctcct cgccgggccg tacctccgcc agctcgggca tcagccgttg
     7201 ggccggacca gttccagccg agccacggtc tcgaggtgga cctcgtcggg cccgtccgcg
     7261 atacgcaggg tgcgcgccat gctccatgcc cgggccagga aggtatcctg cgacacgccg
     7321 gccgcgccgt ggatctggat ggcccgatcg atcaccgcca gcgccatcgg gggcgccacg
//
LOCUS       DASWKS010000664         6037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U2928
            k141_3688807, whole genome shotgun sequence.
ACCESSION   DASWKS010000664 DASWKS010000000
VERSION     DASWKS010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37960573
            Sequence Read Archive: SRR10376087
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/12/2024 07:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,774
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 26
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3688807"
                     /isolate="SMAG_U2928"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="USA: Oregon"
                     /lat_lon="42.99 N 123.63 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..1480
                     /locus_tag="VGA78_18995"
     CDS             53..1480
                     /locus_tag="VGA78_18995"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX9896027.1"
                     /translation="MTRWLSSGAVLLTAACAGAGAQASPSQAPAPAPPPTQTEVFTDT
                     LSFDRAQYVSTYRRRPNPAVLIRNANVFTGAGPEQRGVSVLLQDGKVTGVGASLQAPA
                     GAQVVDGTGKWVTPGIIDTHSHLGVYAAPGTQAESDGNEATNPNTAEVWAEHSVWPHD
                     PQIPLAIAGGVTVMQVLPGSANLIGGRSAILRLVPARTAQEMKFPGAPYGVKMACGEN
                     PKRVYQNRGPSTRMGNMAGYRAAFIAAEQYRQRWDKWLKDRKGDPPARDLKNETLAEV
                     LRGKIYVQNHCYRGDEMAQMLDLAKEFGFTIRSFHHGIEAYKVADLLAAAGTAASVWA
                     DWGGFKMEAFDNINENLALLTQAGAKAILHTDSPDGIQRMNQDMAKAYYAGVRAGIRL
                     TREDAIRWVTTNPAWALGIDQWTGTLENGKMADVVLWSGDPFSVYSKAEKVWNEGWLV
                     FDRSDPTRQYKTDFNLGQTAPGVGR"
     gene            1477..2775
                     /locus_tag="VGA78_19000"
     CDS             1477..2775
                     /locus_tag="VGA78_19000"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX9896028.1"
                     /translation="MTGGRTDRRTDGPTVRRAGKQSVLALVACFLLPAPSFLASQTVA
                     IVGGTVYPVSGPKIERGTVLIRDGRIVEVGANVTVPADAARVDATGKWVTPGLIFAGS
                     DVGTGVAGLFGQSEARLQGDINPSFSPAEGIDPGSLTIGQTRTGGITTAIVPPGGTLL
                     PGQAVTIDLAGNRLDELLVQRGSALVLNLGQGAKQAGGGSRAGTMARLRVLFADALEY
                     DRRRGDFRRDQIQPLSAPAQQLEALLPALRGRQPVIVVANRRMDIENALRLAREFRLR
                     IVLAGAVEGWLVAAQIAEAKVPVAVRPLQDIPDFDGLQARLDVATLLREAGVEVIIAQ
                     ADAGGDRDLRYVAGNAVRNGMSWDDALRAITLAPAAAFGLTDRGTLEAGKVANVVVWS
                     ADPLDFAGHAEKVFIRGREVSLRTRETDLLERYRRLPVTY"
     gene            complement(2765..3148)
                     /locus_tag="VGA78_19005"
     CDS             complement(2765..3148)
                     /locus_tag="VGA78_19005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX9896029.1"
                     /translation="MTSVFDRLRAELEQIGDKARDALEQARLQLEKSRLTRLRDDTAK
                     DLGLLVYQKTRGDEVDPDKRDALIERLDDLQAQLARVDRDLAAVKGEEVSVGQDPAPA
                     GQPADAEITNTPSPPSPPSPPSTSK"
     gene            complement(3307..3576)
                     /gene="rpmA"
                     /locus_tag="VGA78_19010"
     CDS             complement(3307..3576)
                     /gene="rpmA"
                     /locus_tag="VGA78_19010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001816392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEX9896030.1"
                     /translation="MAHKKGVGSSRNGRDSNPQFLGVRKYGGQQVAAGNILVRQRGTK
                     FHAGKNVGRGTDDTLFALVDGVVKFEHKDKKRMKISVYPTAEAAG"
     gene            complement(3566..3898)
                     /gene="rplU"
                     /locus_tag="VGA78_19015"
     CDS             complement(3566..3898)
                     /gene="rplU"
                     /locus_tag="VGA78_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEX9896031.1"
                     /translation="MYAIFRALGKQFKAEKGKTIQVPRMEAEPGSKVTFDQVLLTSDG
                     DKVKAGAPLVKGASVEAEVVGQVKGEKIYIFKFKRRKNYRRKTGHRAKYTELRITDVK
                     VGGGSHGS"
     gene            complement(4086..5675)
                     /locus_tag="VGA78_19020"
     CDS             complement(4086..5675)
                     /locus_tag="VGA78_19020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEX9896032.1"
                     /translation="MAILEDDRLVELLVDRPDHRRIVGDIYLGRVEAVLPGIQAAFVD
                     IGLEKSAFLHASDLLEPDEDEEPGEDAPEVPEVDPAAAVEEAAAGGGNGGSRGRNGKT
                     QPRMREPSRRALPNIEEILTKGQVLPVQVTKEPISTKGCRVTAQISLAGRFLVYMPHA
                     SSRVGVSRKIESREQRGRLREMVAKLLPEDSGGVIVRTVAEGVTEEHFRREIESLLAQ
                     WRKITRKQHFVRKAPVLLQRETTLTRSLIRDVFSDKVDSLWVDSKELHHEVEHYLQQI
                     DPDLLDRVHLYGEATPLFDKFDIESEIKALFRSRVELPTGGYVIIQPTEALVSIDVNT
                     GRYTGKRDPEKTILRTNLEASREIARQLRLRDLGGIIVVDFIDMETRANRDKVLQELR
                     MHLSRDRARTKTLGVSDLGLVEMTRQRIRPSLWASMTEECPTCAGTGRVFTPEVVARR
                     LERSLRRVAHERRERQLAVRLHPEVALYLLEEEPKLLQSLGKTTGLDLEIRDDPMMHL
                     DEFRLMSRPAGRDVTELYAVA"
BASE COUNT          972 a         2006 c         2013 g         1046 t
ORIGIN      
        1 gaaatgatcc gagcgaaata agtcgcacgt cttccaacca ggagcccctt gcatgacccg
       61 atggctatcg agcggcgcgg tgttgctcac cgccgcatgt gccggcgccg gcgcgcaagc
      121 atcaccatcc caagcgccgg ccccagctcc tcccccgacc cagaccgagg tcttcacgga
      181 caccttgagc ttcgaccgcg cccagtacgt gtccacctat cggcggcggc ccaatccggc
      241 ggtgctgatc cggaacgcga acgtcttcac cggagccgga ccggagcaac gcggcgtgtc
      301 ggtgttgctc caggacggca aggtgaccgg ggttggcgcc agcctgcagg ccccggccgg
      361 cgcgcaggtg gtcgacggga ccggcaagtg ggtgacgccc ggcatcatcg atacccacag
      421 tcacctgggg gtttacgcgg ctcccggcac ccaggccgaa tccgacggca acgaggccac
      481 caatcccaac accgcggaag tgtgggccga gcactcggtg tggccccacg atccccagat
      541 cccgctggcg attgcgggcg gcgtcaccgt gatgcaggtc cttcccggat cggccaacct
      601 gatcggcggg cgctcggcga ttctgcggtt ggtgccggcc cgcaccgcac aggaaatgaa
      661 gttcccgggc gcgccgtacg gggtgaagat ggcctgcggg gaaaacccga agcgggtcta
      721 tcagaaccgc ggtccctcga cccggatggg gaacatggcg ggctaccgcg ccgcgtttat
      781 cgccgccgag cagtaccggc agcggtggga taagtggctc aaggaccgca agggcgatcc
      841 cccggcgcgc gatctcaaga atgaaacgct ggccgaggtg ctgcgcggca agatctacgt
      901 gcagaatcat tgctaccgcg gcgacgagat ggcccagatg ctggacctgg ccaaggagtt
      961 cgggttcacg atccgttcgt tccaccacgg catcgaggct tacaaggtgg ccgatctgct
     1021 ggcggccgcc ggcacagcgg cgtcggtgtg ggccgattgg ggcggattca agatggaggc
     1081 gttcgacaac atcaacgaga acctggcgtt gctgacccag gcgggggcga aggccatcct
     1141 gcacaccgac agccccgacg ggatccagcg catgaaccag gacatggcca aggcgtacta
     1201 cgccggggtc cgggccggca tccggctgac ccgcgaagat gccatcaggt gggtgacgac
     1261 caaccccgcc tgggcgctcg ggatcgatca gtggaccggc acgctcgaga acgggaagat
     1321 ggctgacgtg gtactctggt ccggcgatcc cttctcggtg tatagcaaag ccgaaaaggt
     1381 ctggaacgaa gggtggctgg tgttcgaccg gagcgacccg accaggcagt acaagaccga
     1441 tttcaatctg gggcagacgg ccccgggggt gggacgatga cgggcggacg cacggaccga
     1501 cggaccgacg gaccgacggt cagacgggcg ggcaaacagt cggtgctggc gcttgttgcc
     1561 tgcttcctgc tccctgctcc ctccttcctg gcttcgcaga cggtcgcgat cgtcggtggg
     1621 accgtgtatc cggtctccgg gcccaagatc gagcggggca cggtcctgat ccgcgatgga
     1681 cgcattgtcg aggtgggggc caacgtcacg gtcccggccg atgccgcgcg ggtcgacgcc
     1741 accggcaagt gggtgacccc gggcctgatc ttcgcgggct cggacgtggg gaccggtgtg
     1801 gcggggctct tcggtcagag cgaggcgcgg cttcagggtg acatcaatcc gtcgttctcg
     1861 ccggccgaag gcatcgatcc cggatcgctc accatcgggc agacccggac cggcggcatc
     1921 accaccgcca tcgtccctcc gggggggacg ctgctcccgg gccaggccgt caccatcgac
     1981 ctcgccggca atcggctcga tgagctgctg gtgcagcggg gcagcgcgct ggtgctcaac
     2041 ctgggccaag gcgccaagca ggccggtggc ggcagccggg ccggtaccat ggcgcggtta
     2101 cgcgtgctct tcgccgatgc cctggagtac gatcgccggc ggggcgattt ccggcgcgac
     2161 cagatacagc cgctgtccgc gccggcccag cagctcgaag ccctgctccc ggctctcagg
     2221 ggccggcagc cggtgatcgt cgtagccaac cggcggatgg acatcgagaa cgcgctccgt
     2281 ctggcgcgtg agttccggct tcggatcgtg ctggcggggg cggtagaggg ttggctggtc
     2341 gcggcccaga tcgccgaggc caaggtgccg gtggcggtgc ggccgctcca ggacatcccc
     2401 gatttcgatg gcctgcaggc ccggctcgac gtcgcgaccc tgctgcgcga ggccggggtc
     2461 gaggtcatca tcgcccaggc cgatgccgga ggcgatcgcg acctccgcta tgtggcgggc
     2521 aacgcggtgc gcaacggcat gagctgggat gacgcgttgc gggctatcac cctggcgccg
     2581 gccgcggcgt tcgggctgac cgatcggggc acgctggagg ccggcaaagt ggcgaatgtc
     2641 gtggtgtggt cggccgatcc cctggatttc gcgggccacg cggagaaggt gttcattcgc
     2701 gggcgggagg tgtcgctccg gacccgggag accgatctat tggagcggta tcgccgactg
     2761 ccggttactt actagtcgaa gggggcgaag ggggcgaagg gggcgaaggg gtgttcgtga
     2821 tctcggcgtc ggcgggttgc ccggcaggcg ccggatcctg ccccacactc acctcttctc
     2881 cctttactgc cgcgaggtcg cgatcgaccc gagccagctg ggcctgcagg tcatcgagtc
     2941 gctcgatcaa ggcgtcccgt ttgtcggggt cgacttcatc gccccgggtc ttctggtaga
     3001 ccagcaagcc gaggtccttc gcggtgtcat cccggagccg ggtcagccgg ctcttctcca
     3061 gctgcagccg agcctgctcc agggcgtccc gggccttgtc gccaatctgt tccaactccg
     3121 cccggaggcg atcaaaaacg gaggtcattt cttacctcgg tcgaagatgt cgaagcaggt
     3181 cgaagatagt cgaaggcggt cgaaggcggc caacgaaaag gggcgaattc accgttcgcc
     3241 cctaccgtct tcgaccgcct tcgactgttt cgacgccttc gactgtttcg accgccttcg
     3301 accggtttac ccggccgctt ccgcggtcgg atagacggag atcttcattc gcttcttgtc
     3361 cttgtgctcg aacttgacca cgccgtcgac cagggcgaag agggtatcat cggtgccgcg
     3421 gccgacattc ttgccggcgt gaaacttggt gccgcgctgc cgcaccagga tgttgcccgc
     3481 ggccacttgc tggccgccgt atttgcggac gccgaggaac tgcggattgc tgtcccgccc
     3541 gttccggctc gagccaacgc ctttcttatg agccatgact gcctcccccg accttcacgt
     3601 cggtgatcct gagctcggtg tacttggccc gatgcccggt cttccgacga tagttcttcc
     3661 gccgcttgaa tttgaagatg tagatcttct cgcccttcac ctgccccacc acttcggcct
     3721 cgaccgaggc gcccttcacc agcggggcgc cggccttcac cttgtcgcca tcggaggtga
     3781 gcagcacctg gtcgaaggtc accttggacc ccggctcggc ttccatccgc ggcacctgga
     3841 ttgtcttgcc cttctcagct ttgaactgct tgccgagggc gcgaaagatc gcgtacatat
     3901 gcccttccct gttcccttac cgtccggaat gcctgcgagc aagccagcaa acgtaaatac
     3961 gacaggcgct tactgcaagt cgaaggggtc gaaggcggtc aaagcgggtc gaagaaggtg
     4021 gacgatcagc ttggcaggac gctcttcgac ccccttcgac cgccttcgac cgctttcgac
     4081 cgttgttacg ccacggcgta caactccgtc acatcccgcc ccgccggtcg gctcatcagc
     4141 cggaactcat ccaggtgcat catggggtcg tcccggatct cgaggtcgag cccggtggtc
     4201 ttccccaggc tctgcagcag cttgggctcc tcctcgagca ggtacagcgc cacctcggga
     4261 tggagccgga ccgccagttg ccgttcccgc cgctcgtggg ccacccgccg cagagaccgc
     4321 tccagccgcc gagccactac ttcaggcgta aagacccgcc cggtgccggc gcaggtgggg
     4381 cactcctcgg tcatcgaggc ccagagggaa ggccggatcc gctggcgggt catctccacc
     4441 aaccccagat ccgagacccc cagcgtcttg gtgcgggccc gatcccggct caggtgcatt
     4501 cgaagctcct gcagcacctt gtcgcggttg gcccgggtct ccatgtcgat gaagtcgacc
     4561 acgatgatcc cacccaggtc cctgagccga agctggcggg cgatctcgcg cgacgcctcg
     4621 aggttggtgc ggaggatggt cttctcgggg tcgcgcttgc cggtgtagcg gccggtgttg
     4681 acgtcgatcg acaccagcgc ttcggtcggc tgaatgatca cgtagccgcc ggtcggcaac
     4741 tccacccggg accggaacag cgccttgatc tcgctctcga tgtcgaactt gtcgaacagc
     4801 ggggtggctt cgccgtagag gtggacccga tccagcagat cgggatcgat ctgctgcagg
     4861 taatgctcga cctcgtggtg cagctctttg gagtcgaccc agaggctgtc gaccttgtcg
     4921 ctgaagacgt cgcgaatcag gctccgggta agggtggtct cacgctgcag caggaccggc
     4981 gctttgcgga cgaagtgctg cttgcgggtg atcttgcgcc actgggccag cagcgactcg
     5041 atctcccgcc ggaaatgttc ttcggtaacg ccttccgcca cggttcggac gatgaccccg
     5101 ccggaatcct ccggcaggag tttggccacc atctcccgaa ggcggccgcg ctgctcccgg
     5161 ctctcgatct tccggctgac accaacccgg gacgaggcgt ggggcatgta gaccaggaac
     5221 cggccggcca gcgagatctg cgcggtcacc cgacagccct tggtgctgat gggctccttg
     5281 gtgacctgga ccgggagcac ctgccccttg gtcaggatct cttcgatgtt gggaagggcc
     5341 cgccgggatg gctcccgcat ccggggctgg gtcttgccgt tgcgtccgcg gctgccgcca
     5401 ttgcccccgc cggcggcggc ttcctccacc gccgccgccg ggtcgacctc gggcacctcg
     5461 ggcgcatcct ccccgggctc ctcgtcctca tccggctcga ggagatcgga ggcgtgcaga
     5521 aaggcggatt tctccaggcc tatgtcaaca aaggcagcct ggattccggg taagacggct
     5581 tccactcgac cgagataaat atcgccgacg atgcgacgat gatcggggcg gtcgaccagc
     5641 agctcgacca ggcggtcgtc ctcgaggata gccaccctgg tctcgcgcgg gcccccgttg
     5701 atgaggattt cgcgcttcaa actcgaagtc tccaattgct gtttctccgg aacgccccgc
     5761 gcttccccca gtcacggtcc tcagtaagac cgggcccggc gcaacgattc catccggcgc
     5821 tccgcgcacg aatcccgcgc agggccatcg ctcagcgcga gcggactggt cctgcgggcg
     5881 atgggcggaa cctctgccga cgaggtcgtt tacgaacgag cgggaggatg ctagcgcctg
     5941 aaggaggcgt cctgccatct gccaaaccgc atgcactgcc gcgttccagc cgcctttcgg
     6001 ggcgggccat tggggtccct ggtcggacca tgcggcg
//
